oS
score: 0.6288               - local score at 
h:  300                     - window width
fullscore: 0.4555           - score for full overlap of length
overlaplen: 439
pA: 140                     - position of best sub-barcode on barcode A
or: 1                       - orientation (1 = forward)
pB: 303                     - position of best sub-barcode on barcode B
lenA: 703                   - lenght barcode A
lenB: 602                   - length barcode B
bestBarStretch: 1           - best barcode A length re-scaling factor
% additional, maybe not that useful parameters. Check if they are used somewhere
allposA: [602×1 double]
allposB: [602×1 double]
fulloverlapScoreB: [140×1 double]
fulloverlapPosRoot: [164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 … ]
localSFoverlap: [6 6 6 6 6 6 6 6 6 6 5 6 6 6 6 6 5 5 5 5 5 5 5 5 5 5 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 7 … ]
fulloverlapor: [1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 … ]
fulloverlapPosA: [1 2 3 3 5 6 7 8 9 10 9 12 13 14 15 16 15 16 17 18 19 20 21 22 23 24 27 28 29 30 31 32 33 34 35 … ]
fulloverlapPosARescaled: [1 2 3 3 5 6 7 8 9 10 9.0909 12 13 14 15 16 15.1515 16.1616 17.1717 18.1818 19.1919 20.2020 … ]