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["S2 Table. Primer and probe targeting sequence position and variation annotation. "]
["Genomic location","Gene / region name","Number of mutant virus strains","No. ","Region","Primer or Probe","No. ","Region","Primer or Probe","No. ","Region","Primer or Probe","Variation annotation type","Variation type","Base changes and number of virus strains","Assessment rating","Protein name. Position. Amino acid changes","Gene symbol. CDS position. Sequence change","Time variance","Regional variance","Effect type Ensembl Variation - Calculated variant consequences\">","Latest update"]
[484,"orf1ab",0,1,"ORF1a","F"]
[485,"orf1ab",0,1,"ORF1a","F"]
[486,"orf1ab",1,1,"ORF1a","F",{"$nulls":6},"missense_variant","SNP","C->T:1","III","QHD43415.1:p.74S>L","gene-orf1ab:c.221tCg>tTg","2.65512e-9","8.44595e-8","MODERATE","2020-04-13 00:25:41"]
[487,"orf1ab",0,1,"ORF1a","F"]
[488,"orf1ab",0,1,"ORF1a","F"]
[489,"orf1ab",1,1,"ORF1a","F",{"$nulls":6},"missense_variant","SNP","A->G:1","III","QHD43415.1:p.75D>G","gene-orf1ab:c.224gAt>gGt","2.65512e-9","6.54054e-8","MODERATE","2020-04-13 00:25:41"]
[490,"orf1ab",35,1,"ORF1a","F",{"$nulls":6},"missense_variant; coding_sequence_variant","SNP","T->A:34; T- >W:1","III","QHD43415.1:p.75D>E; QHD43415.1:p.75-","gene-orf1ab:c.225gaT>gaA; gene-orf1ab:c.225gaT>gaW",9.45874e-06,0.000654947,"MODERATE; MODIFIER","2020-04-13 00:25:41"]
[491,"orf1ab",0,1,"ORF1a","F"]
[492,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F"]
[493,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F"]
[494,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F"]
[495,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F"]
[496,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F"]
[497,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F"]
[498,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F"]
[499,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F"]
[500,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F"]
[501,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F"]
[502,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F",3,"ORF1a","F"]
[503,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F",3,"ORF1a","F"]
[504,"orf1ab",0,1,"ORF1a","F",2,"ORF1a","F",3,"ORF1a","F"]
[505,"orf1ab",0,{"$nulls":3},2,"ORF2a","F",3,"ORF1a","F"]
[506,"orf1ab",0,{"$nulls":3},2,"ORF3a","F",3,"ORF1a","F"]
[507,"orf1ab",3,{"$nulls":3},2,"ORF4a","F",3,"ORF1a","F","inframe_deletion","Deletion","ATGGTCATGTT ATGGT->A:3","III","QHD43415.1:p.81-86HGHVMV>H","gene-orf1ab:c.243-257caTGGTCATGTTATGGTt>cat",2.67267e-06,1.52665E-6,"MODERATE","2020-04-13 00:25:41"]
[508,"orf1ab",0,{"$nulls":3},2,"ORF5a","F",3,"ORF1a","F"]
[509,"orf1ab",1,{"$nulls":3},2,"ORF6a","F",3,"ORF1a","F","inframe_deletion","Deletion","GGTCATGTTA- >G:1","III","QHD43415.1:p.82-85GHVM>V","gene-orf1ab:c.245-253gGTCATGTTAtg>gtg","7.584e-9","3.94054e-7","MODERATE","2020-04-13 00:25:41"]
[510,"orf1ab",1,{"$nulls":3},2,"ORF7a","F",3,"ORF1a","F","missense_variant","SNP","G->A:1","III","QHD43415.1:p.82G>D","gene-orf1ab:c.245gGt>gAt","1.0268e-8",8.85622e-06,"MODERATE","2020-04-13 00:25:41"]
[511,"orf1ab",0,{"$nulls":6},3,"ORF1a","F"]
[512,"orf1ab",0,{"$nulls":6},3,"ORF1a","F"]
[513,"orf1ab",1,{"$nulls":6},3,"ORF1a","F","inframe_deletion","Deletion","ATGTTATGGT- >A:1","III","QHD43415.1:p.83-86HVMV>H","gene-orf1ab:c.249-257caTGTTATGGTt>cat","9.62482e-9","1.13649e-7","MODERATE","2020-04-13 00:25:41"]
[514,"orf1ab",87,{"$nulls":6},3,"ORF1a","F","synonymous_variant; coding_sequence_variant; inframe_deletion","SNP; Deletion","T->C:85; T- >Y:1; TGTT ATG->T:1","II","QHD43415.1:p.83H; QHD43415.1:p.83-; QHD43415.1:p.84-85VM>-","gene-orf1ab:c.249caT>caC; gene-orf1ab:c.249caT>caY; gene-orf1ab:c.250-255GTTATG>-",0.000764812,1.65098E-3,"LOW; MODIFIER; MODERATE","2020-04-13 00:25:41"]
[517,"orf1ab",2,{"$nulls":6},3,"ORF1a","F","inframe_deletion","Deletion","TATG->T:2","III","QHD43415.1:p.85M>-","gene-orf1ab:c.253-255ATG>-","1.0973e-7","9.45724e-8","MODERATE","2020-04-13 00:25:41"]
[518,"orf1ab",0,{"$nulls":6},3,"ORF1a","F"]
[519,"orf1ab",0,{"$nulls":6},3,"ORF1a","F"]
[520,"orf1ab",1,{"$nulls":6},3,"ORF1a","F","coding_sequence_variant","SNP","G->K:1","III","QHD43415.1:p.85-","gene-orf1ab:c.255atG>atK","1.9965e-8",3.85959e-06,"MODIFIER","2020-04-13 00:25:41"]
[521,"orf1ab",0,{"$nulls":6},3,"ORF1a","F"]
[805,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[806,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[807,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[808,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[809,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[810,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[811,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[812,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[813,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[814,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[815,"orf1ab",0,{"$nulls":6},3,"ORF1a","R"]
[816,"orf1ab",0,{"$nulls":3},2,"ORF1a","R",3,"ORF1a","R"]
[817,"orf1ab",0,{"$nulls":3},2,"ORF1a","R",3,"ORF1a","R"]
[818,"orf1ab",1,{"$nulls":3},2,"ORF1a","R",3,"ORF1a","R","coding_sequence_variant","SNP","T->Y:1","III","QHD43415.1:p.185-","gene-orf1ab:c.553Tat>Yat","1.0268e-8","6.54054e-8","MODIFIER","2020-04-13 00:25:42"]
[819,"orf1ab",0,{"$nulls":3},2,"ORF1a","R",3,"ORF1a","R"]
[820,"orf1ab",0,{"$nulls":3},2,"ORF1a","R",3,"ORF1a","R"]
[821,"orf1ab",0,{"$nulls":3},2,"ORF1a","R",3,"ORF1a","R"]
[822,"orf1ab",0,{"$nulls":3},2,"ORF1a","R",3,"ORF1a","R"]
[823,"orf1ab",0,{"$nulls":3},2,"ORF1a","R",3,"ORF1a","R"]
[824,"orf1ab",0,{"$nulls":3},2,"ORF1a","R"]
[825,"orf1ab",0,{"$nulls":3},2,"ORF1a","R"]
[826,"orf1ab",0,{"$nulls":3},2,"ORF1a","R"]
[827,"orf1ab",0,{"$nulls":3},2,"ORF1a","R"]
[828,"orf1ab",0,{"$nulls":3},2,"ORF1a","R"]
[829,"orf1ab",2,{"$nulls":3},2,"ORF1a","R",{"$nulls":3},"synonymous_variant; coding_sequence_variant","SNP","C->T:1; C-> Y:1","III","QHD43415.1:p.188N; QHD43415.1:p.188-","gene-orf1ab:c.564aaC>aaT; gene-orf1ab:c.564aaC>aaY","3.51536e-8",3.91123e-06,"LOW; MODIFIER","2020-04-13 00:25:42"]
[830,"orf1ab",0,{"$nulls":3},2,"ORF1a","R"]
[831,"orf1ab",0,{"$nulls":3},2,"ORF1a","R"]
[832,"orf1ab",4,{"$nulls":3},2,"ORF1a","R",{"$nulls":3},"synonymous_variant","SNP","C->T:4","III","QHD43415.1:p.189N","gene-orf1ab:c.567aaC>aaT","3.55362e-7","1.75135e-7","LOW","2020-04-13 00:25:42"]
[833,"orf1ab",9,{"$nulls":3},2,"ORF1a","R",{"$nulls":3},"missense_variant","SNP","T->C:9","III","QHD43415.1:p.190F>L","gene-orf1ab:c.568Ttc>Ctc","7.5153e-7",1.90139e-06,"MODERATE","2020-04-13 00:25:42"]
[834,"orf1ab",0,{"$nulls":3},2,"ORF1a","R"]
[835,"orf1ab",1,{"$nulls":3},2,"ORF1a","R",{"$nulls":3},"synonymous_variant","SNP","C->T:1","III","QHD43415.1:p.190F","gene-orf1ab:c.570ttC>ttT","1.9965e-8",1.85e-05,"LOW","2020-04-13 00:25:42"]
[836,"orf1ab",0,{"$nulls":3},2,"ORF1a","R"]
[837,"orf1ab",0,{"$nulls":3},2,"ORF1a","R"]
[874,"orf1ab",0,1,"ORF1a","R"]
[875,"orf1ab",2,1,"ORF1a","R",{"$nulls":6},"missense_variant","SNP","C->T:2","III","QHD43415.1:p.204L>F","gene-orf1ab:c.610Ctt>Ttt","3.02742e-8","2.49865e-7","MODERATE","2020-04-13 00:25:42"]
[876,"orf1ab",0,1,"ORF1a","R"]
[877,"orf1ab",0,1,"ORF1a","R"]
[878,"orf1ab",1,1,"ORF1a","R",{"$nulls":6},"missense_variant","SNP","C->A:1","III","QHD43415.1:p.205L>I","gene-orf1ab:c.613Cta>Ata","2.52834e-8","8.44595e-8","MODERATE","2020-04-13 00:25:42"]
[879,"orf1ab",0,1,"ORF1a","R"]
[880,"orf1ab",0,1,"ORF1a","R"]
[881,"orf1ab",0,1,"ORF1a","R"]
[882,"orf1ab",0,1,"ORF1a","R"]
[883,"orf1ab",0,1,"ORF1a","R"]
[884,"orf1ab",21,1,"ORF1a","R",{"$nulls":6},"missense_variant","SNP","C->T:21","III","QHD43415.1:p.207R>C","gene-orf1ab:c.619Cgt>Tgt",1.39887E-5,0.0102096,"MODERATE","2020-04-13 00:25:42"]
[885,"orf1ab",0,1,"ORF1a","R"]
[886,"orf1ab",0,1,"ORF1a","R"]
[887,"orf1ab",0,1,"ORF1a","R"]
[888,"orf1ab",0,1,"ORF1a","R"]
[889,"orf1ab",0,1,"ORF1a","R"]
[890,"orf1ab",0,1,"ORF1a","R"]
[891,"orf1ab",0,1,"ORF1a","R"]
[892,"orf1ab",0,1,"ORF1a","R"]
[893,"orf1ab",0,1,"ORF1a","R"]
[894,"orf1ab",0,1,"ORF1a","R"]
[895,"orf1ab",0,1,"ORF1a","R"]
[896,"orf1ab",0,1,"ORF1a","R"]
[12690,"orf1ab",0,4,"RdRp","F"]
[12691,"orf1ab",0,4,"RdRp","F"]
[12692,"orf1ab",0,4,"RdRp","F"]
[12693,"orf1ab",0,4,"RdRp","F"]
[12694,"orf1ab",0,4,"RdRp","F"]
[12695,"orf1ab",0,4,"RdRp","F"]
[12696,"orf1ab",0,4,"RdRp","F"]
[12697,"orf1ab",0,4,"RdRp","F"]
[12698,"orf1ab",0,4,"RdRp","F"]
[12699,"orf1ab",0,4,"RdRp","F"]
[12700,"orf1ab",0,4,"RdRp","F"]
[12701,"orf1ab",0,4,"RdRp","F"]
[12702,"orf1ab",0,4,"RdRp","F"]
[12703,"orf1ab",0,4,"RdRp","F"]
[12704,"orf1ab",0,4,"RdRp","F"]
[12705,"orf1ab",0,4,"RdRp","F"]
[12706,"orf1ab",0,4,"RdRp","F"]
[12707,"orf1ab",0,4,"RdRp","F"]
[12716,"orf1ab",0,4,"RdRp","P"]
[12717,"orf1ab",0,4,"RdRp","P"]
[12718,"orf1ab",0,4,"RdRp","P"]
[12719,"orf1ab",0,4,"RdRp","P"]
[12720,"orf1ab",0,4,"RdRp","P"]
[12721,"orf1ab",0,4,"RdRp","P"]
[12722,"orf1ab",2,4,"RdRp","P",{"$nulls":6},"missense_variant","SNP","T->C:2","III","QHD43415.1:p.4153S>P","gene-orf1ab:c.12457Tct>Cct","1.29043e-7",1.57622E-6,"MODERATE","2020-04-13 00:26:02"]
[12723,"orf1ab",0,4,"RdRp","P"]
[12724,"orf1ab",0,4,"RdRp","P"]
[12725,"orf1ab",0,4,"RdRp","P"]
[12726,"orf1ab",0,4,"RdRp","P"]
[12727,"orf1ab",0,4,"RdRp","P"]
[12728,"orf1ab",0,4,"RdRp","P"]
[12729,"orf1ab",0,4,"RdRp","P"]
[12730,"orf1ab",0,4,"RdRp","P"]
[12731,"orf1ab",0,4,"RdRp","P"]
[12732,"orf1ab",0,4,"RdRp","P"]
[12733,"orf1ab",0,4,"RdRp","P"]
[12734,"orf1ab",0,4,"RdRp","P"]
[12735,"orf1ab",0,4,"RdRp","P"]
[12736,"orf1ab",0,4,"RdRp","P"]
[12737,"orf1ab",0,4,"RdRp","P"]
[12779,"orf1ab",0,4,"RdRp","R"]
[12780,"orf1ab",0,4,"RdRp","R"]
[12781,"orf1ab",4,4,"RdRp","R",{"$nulls":6},"synonymous_variant","SNP","C->T:4","III","QHD43415.1:p.4172Y","gene-orf1ab:c.12516taC>taT","1.21521e-7",6.91928e-05,"LOW","2020-04-13 00:26:02"]
[12782,"orf1ab",0,4,"RdRp","R"]
[12783,"orf1ab",0,4,"RdRp","R"]
[12784,"orf1ab",0,4,"RdRp","R"]
[12785,"orf1ab",0,4,"RdRp","R"]
[12786,"orf1ab",0,4,"RdRp","R"]
[12787,"orf1ab",2,4,"RdRp","R",{"$nulls":6},"synonymous_variant","SNP","A->G:2","III","QHD43415.1:p.4174T","gene-orf1ab:c.12522acA>acG","2.7013e-8","4.37838e-8","LOW","2020-04-13 00:26:02"]
[12788,"orf1ab",0,4,"RdRp","R"]
[12789,"orf1ab",0,4,"RdRp","R"]
[12790,"orf1ab",0,4,"RdRp","R"]
[12791,"orf1ab",0,4,"RdRp","R"]
[12792,"orf1ab",0,4,"RdRp","R"]
[12793,"orf1ab",2,4,"RdRp","R",{"$nulls":6},"missense_variant","SNP","G->T:2","III","QHD43415.1:p.4176K>N","gene-orf1ab:c.12528aaG>aaT",3.40447e-06,0.00337822,"MODERATE","2020-04-13 00:26:02"]
[12794,"orf1ab",0,4,"RdRp","R"]
[12795,"orf1ab",0,4,"RdRp","R"]
[12796,"orf1ab",1,4,"RdRp","R",{"$nulls":6},"synonymous_variant","SNP","A->C:1","III","QHD43415.1:p.4177G","gene-orf1ab:c.12531ggA>ggC","7.584e-9","6.54054e-8","LOW","2020-04-13 00:26:02"]
[12797,"orf1ab",1,4,"RdRp","R",{"$nulls":6},"missense_variant","SNP","G->A:1","III","QHD43415.1:p.4178G>S","gene-orf1ab:c.12532Ggt>Agt","1.443e-8",0.000844595,"MODERATE","2020-04-13 00:26:02"]
[13342,"orf1ab",0,5,"ORF1ab ","F"]
[13343,"orf1ab",0,5,"ORF1ab ","F"]
[13344,"orf1ab",0,5,"ORF1ab ","F"]
[13345,"orf1ab",0,5,"ORF1ab ","F"]
[13346,"orf1ab",0,5,"ORF1ab ","F"]
[13347,"orf1ab",0,5,"ORF1ab ","F"]
[13348,"orf1ab",0,5,"ORF1ab ","F"]
[13349,"orf1ab",0,5,"ORF1ab ","F"]
[13350,"orf1ab",0,5,"ORF1ab ","F"]
[13351,"orf1ab",0,5,"ORF1ab ","F"]
[13352,"orf1ab",0,5,"ORF1ab ","F"]
[13353,"orf1ab",0,5,"ORF1ab ","F"]
[13354,"orf1ab",0,5,"ORF1ab ","F"]
[13355,"orf1ab",0,5,"ORF1ab ","F"]
[13356,"orf1ab",0,5,"ORF1ab ","F"]
[13357,"orf1ab",0,5,"ORF1ab ","F"]
[13358,"orf1ab",1,5,"ORF1ab ","F",{"$nulls":6},"missense_variant","SNP","C->T:1","III","QHD43415.1:p.4365L>F","gene-orf1ab:c.13093Ctt>Ttt","1.9965e-8","8.44595e-8","MODERATE","2020-04-13 00:26:03"]
[13359,"orf1ab",0,5,"ORF1ab ","F"]
[13360,"orf1ab",0,5,"ORF1ab ","F"]
[13361,"orf1ab",0,5,"ORF1ab ","F"]
[13362,"orf1ab",0,5,"ORF1ab ","F"]
[13377,"orf1ab",1,5,"ORF1ab ","P",{"$nulls":6},"missense_variant","SNP","C->A:1","III","QHD43415.1:p.4371T>N","gene-orf1ab:c.13112aCc>aAc","1.32839e-8","2.27162e-7","MODERATE","2020-04-13 00:26:03"]
[13378,"orf1ab",0,5,"ORF1ab ","P"]
[13379,"orf1ab",0,5,"ORF1ab ","P"]
[13380,"orf1ab",0,5,"ORF1ab ","P"]
[13381,"orf1ab",1,5,"ORF1ab ","P",{"$nulls":6},"synonymous_variant","SNP","C->T:1","III","QHD43415.1:p.4372V","gene-orf1ab:c.13116gtC>gtT","3.81159e-9","6.54054e-8","LOW","2020-04-13 00:26:03"]
[13382,"orf1ab",0,5,"ORF1ab ","P"]
[13383,"orf1ab",0,5,"ORF1ab ","P"]
[13384,"orf1ab",0,5,"ORF1ab ","P"]
[13385,"orf1ab",0,5,"ORF1ab ","P"]
[13386,"orf1ab",0,5,"ORF1ab ","P"]
[13387,"orf1ab",0,5,"ORF1ab ","P"]
[13388,"orf1ab",0,5,"ORF1ab ","P"]
[13389,"orf1ab",0,5,"ORF1ab ","P"]
[13390,"orf1ab",0,5,"ORF1ab ","P"]
[13391,"orf1ab",0,5,"ORF1ab ","P"]
[13392,"orf1ab",0,5,"ORF1ab ","P"]
[13393,"orf1ab",0,5,"ORF1ab ","P"]
[13394,"orf1ab",0,5,"ORF1ab ","P"]
[13395,"orf1ab",0,5,"ORF1ab ","P"]
[13396,"orf1ab",0,5,"ORF1ab ","P"]
[13397,"orf1ab",0,5,"ORF1ab ","P"]
[13398,"orf1ab",0,5,"ORF1ab ","P"]
[13399,"orf1ab",0,5,"ORF1ab ","P"]
[13400,"orf1ab",0,5,"ORF1ab ","P"]
[13401,"orf1ab",0,5,"ORF1ab ","P"]
[13402,"orf1ab",51,5,"ORF1ab ","P",{"$nulls":6},"stop_gained","SNP","T->G:51","II","QHD43415.1:p.4379Y>*","gene-orf1ab:c.13137taT>taG",4.22417e-05,1.96911E-3,"HIGH","2020-04-13 00:26:03"]
[13403,"orf1ab",0,5,"ORF1ab ","P"]
[13404,"orf1ab",0,5,"ORF1ab ","P"]
[13442,"orf1ab",0,5,"ORF1ab","R"]
[13443,"orf1ab",0,5,"ORF1ab","R"]
[13444,"orf1ab",0,5,"ORF1ab","R"]
[13445,"orf1ab",0,5,"ORF1ab","R"]
[13446,"orf1ab",0,5,"ORF1ab","R"]
[13447,"orf1ab",0,5,"ORF1ab","R"]
[13448,"orf1ab",0,5,"ORF1ab","R"]
[13449,"orf1ab",0,5,"ORF1ab","R"]
[13450,"orf1ab",0,5,"ORF1ab","R"]
[13451,"orf1ab",0,5,"ORF1ab","R"]
[13452,"orf1ab",0,5,"ORF1ab","R"]
[13453,"orf1ab",0,5,"ORF1ab","R"]
[13454,"orf1ab",0,5,"ORF1ab","R"]
[13455,"orf1ab",0,5,"ORF1ab","R"]
[13456,"orf1ab",0,5,"ORF1ab","R"]
[13457,"orf1ab",0,5,"ORF1ab","R"]
[13458,"orf1ab",1,5,"ORF1ab","R",{"$nulls":6},"missense_variant","SNP","C->T:1","III","QHD43415.1:p.4398S>L","gene-orf1ab:c.13193tCg>tTg","1.443e-8","2.27162e-7","MODERATE","2020-04-13 00:26:03"]
[13459,"orf1ab",0,5,"ORF1ab","R"]
[13460,"orf1ab",0,5,"ORF1ab","R"]
[14080,"orf1ab",0,6,"RdRp","F"]
[14081,"orf1ab",0,6,"RdRp","F"]
[14082,"orf1ab",0,6,"RdRp","F"]
[14083,"orf1ab",0,6,"RdRp","F"]
[14084,"orf1ab",0,6,"RdRp","F"]
[14085,"orf1ab",0,6,"RdRp","F"]
[14086,"orf1ab",0,6,"RdRp","F"]
[14087,"orf1ab",0,6,"RdRp","F"]
[14088,"orf1ab",0,6,"RdRp","F"]
[14089,"orf1ab",0,6,"RdRp","F"]
[14090,"orf1ab",0,6,"RdRp","F"]
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[28707,"N",0,17,"N","P"]
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[28709,"N",2,17,"N","P",{"$nulls":6},"missense_variant","SNP","A->T:2","III","QHD43423.2:p.146I>F","gene-N:c.436Att>Ttt","2.31839e-7","4.37838e-8","MODERATE","2020-04-13 00:26:28"]
[28710,"N",0,17,"N","P"]
[28711,"N",0,17,"N","P"]
[28712,"N",0,17,"N","P"]
[28713,"N",0,17,"N","P"]
[28714,"N",0,17,"N","P"]
[28715,"N",0,17,"N","P"]
[28716,"N",1,17,"N","P",{"$nulls":6},"missense_variant","SNP","C->T:1","III","QHD43423.2:p.148T>I","gene-N:c.443aCc>aTc",6.86871e-06,5.40541e-06,"MODERATE","2020-04-13 00:26:28"]
[28717,"N",0,17,"N","P"]
[28718,"N",0,17,"N","P"]
[28719,"N",0,17,"N","P"]
[28720,"N",1,17,"N","P",{"$nulls":6},"synonymous_variant","SNP","C->T:1","III","QHD43423.2:p.149R","gene-N:c.447cgC>cgT","6.13069e-9","1.09459e-8","LOW","2020-04-13 00:26:28"]
[28721,"N",0,17,"N","P"]
[28722,"N",0,17,"N","P"]
[28723,"N",0,17,"N","P"]
[28724,"N",0,17,"N","P"]
[28725,"N",3,17,"N","P",{"$nulls":6},"missense_variant","SNP","C->T:3","III","QHD43423.2:p.151P>L","gene-N:c.452cCt>cTt","7.93506e-8","5.70946e-7","MODERATE","2020-04-13 00:26:28"]
[28726,"N",0,17,"N","P"]
[28727,"N",2,17,"N","P",{"$nulls":6},"missense_variant","SNP","G->T:2","III","QHD43423.2:p.152A>S","gene-N:c.454Gct>Tct","2.88085e-8","4.37838e-8","MODERATE","2020-04-13 00:26:28"]
[28734,"N",0,17,"N","R"]
[28735,"N",0,17,"N","R"]
[28736,"N",0,17,"N","R"]
[28737,"N",3,17,"N","R",{"$nulls":6},"missense_variant","SNP","C->T:3","III","QHD43423.2:p.155A>V","gene-N:c.464gCt>gTt","9.61554e-8","3.47118e-7","MODERATE","2020-04-13 00:26:28"]
[28738,"N",0,17,"N","R"]
[28739,"N",4,17,"N","R",{"$nulls":6},"missense_variant","SNP","G->T:4","III","QHD43423.2:p.156A>S","gene-N:c.466Gca>Tca","2.69406e-7","3.39024e-7","MODERATE","2020-04-13 00:26:28"]
[28740,"N",0,17,"N","R"]
[28741,"N",0,17,"N","R"]
[28742,"N",0,17,"N","R"]
[28743,"N",1,17,"N","R",{"$nulls":6},"missense_variant","SNP","T->C:1","III","QHD43423.2:p.157I>T","gene-N:c.470aTc>aCc","1.0268e-8","1.13649e-7","MODERATE","2020-04-13 00:26:28"]
[28744,"N",2,17,"N","R",{"$nulls":6},"synonymous_variant; coding_sequence_variant","SNP","C->T:1; C-> Y:1","III","QHD43423.2:p.157I; QHD43423.2:p.157-","gene-N:c.471atC>atT; gene-N:c.471atC>atY","2.45413e-8","1.47829e-7","LOW; MODIFIER","2020-04-13 00:26:28"]
[28745,"N",0,17,"N","R"]
[28746,"N",0,17,"N","R"]
[28747,"N",0,17,"N","R"]
[28748,"N",0,17,"N","R"]
[28749,"N",0,17,"N","R"]
[28750,"N",0,17,"N","R"]
[28751,"N",0,17,"N","R"]
[28752,"N",0,17,"N","R"]
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[28882,"N",608,18,"N","F",{"$nulls":6},"synonymous_variant; coding_sequence_variant","SNP","G->A:603; G ->R:5","I","QHD43423.2:p.203R; QHD43423.2:p.203-","gene-N:c.609agG>agA; gene-N:c.609agG>agR",2.83607E-3,0.0424332,"LOW; MODIFIER","2020-04-13 00:26:29"]
[28883,"N",608,18,"N","F",{"$nulls":6},"coding_sequence_variant; missense_variant","SNP","G->S:5; G-> C:603","I","QHD43423.2:p.204-; QHD43423.2:p.204G>R","gene-N:c.610Gga>Sga; gene-N:c.610Gga>Cga",2.83607E-3,0.0424332,"MODIFIER; MODERATE","2020-04-13 00:26:29"]
[28884,"N",0,18,"N","F"]
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[28886,"N",0,18,"N","F"]
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[28888,"N",0,18,"N","F"]
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[28890,"N",0,18,"N","F"]
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[28893,"N",1,18,"N","F",{"$nulls":6},"missense_variant","SNP","C->T:1","III","QHD43423.2:p.207P>L","gene-N:c.620cCt>cTt","2.65512e-9","6.54054e-8","MODERATE","2020-04-13 00:26:29"]
[28894,"N",0,18,"N","F"]
[28895,"N",0,18,"N","F"]
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[28897,"N",0,18,"N","F"]
[28898,"N",0,18,"N","F"]
[28899,"N",2,18,"N","F",{"$nulls":6},"missense_variant","SNP","G->C:2","III","QHD43423.2:p.209R>T","gene-N:c.626aGa>aCa","2.7013e-8","4.37838e-8","MODERATE","2020-04-13 00:26:30"]
[28900,"N",0,18,"N","F"]
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[28961,"N",1,18,"N","R",{"$nulls":6},"missense_variant","SNP","C->T:1","III","QHD43423.2:p.230L>F","gene-N:c.688Ctt>Ttt","2.26613e-8","6.54054e-8","MODERATE","2020-04-13 00:26:30"]
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[28964,"N",0,18,"N","R"]
[28965,"N",0,18,"N","R"]
[28966,"N",0,18,"N","R"]
[28967,"N",0,18,"N","R"]
[28968,"N",1,18,"N","R",{"$nulls":6},"missense_variant","SNP","G->C:1","III","QHD43423.2:p.232S>T","gene-N:c.695aGc>aCc","6.86663e-9","1.09459e-8","MODERATE","2020-04-13 00:26:30"]
[28969,"N",2,18,"N","R",{"$nulls":6},"missense_variant; synonymous_variant","SNP","C->A:1; C-> T:1","III","QHD43423.2:p.232S>R; QHD43423.2:p.232S","gene-N:c.696agC>agA; gene-N:c.696agC>agT","3.07256e-8","4.37838e-8","MODERATE; LOW","2020-04-13 00:26:30"]
[28970,"N",0,18,"N","R"]
[28971,"N",0,18,"N","R"]
[28972,"N",0,18,"N","R"]
[28973,"N",0,18,"N","R"]
[28974,"N",0,18,"N","R"]
[28975,"N",2,18,"N","R",{"$nulls":6},"missense_variant","SNP","G->A:1; G-> T:1","III","QHD43423.2:p.234M>I","gene-N:c.702atG>atA; gene-N:c.702atG>atT","2.63451e-8","3.37838e-7","MODERATE","2020-04-13 00:26:30"]
[28976,"N",1,18,"N","R",{"$nulls":6},"missense_variant","SNP","T->C:1","III","QHD43423.2:p.235S>P","gene-N:c.703Tct>Cct","8.94063e-8","1.09459e-8","MODERATE","2020-04-13 00:26:30"]
[28977,"N",0,18,"N","R"]
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[29135,"N",0,{"$nulls":3},19,"N","F"]
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[29141,"N",0,{"$nulls":3},19,"N","F"]
[29142,"N",0,{"$nulls":3},19,"N","F"]
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[29144,"N",11,{"$nulls":3},19,"N","F",{"$nulls":3},"synonymous_variant","SNP","C->T:11","III","QHD43423.2:p.291L","gene-N:c.871Cta>Tta",3.26493e-06,8.80727e-05,"LOW","2020-04-13 00:26:30"]
[29145,"N",0,{"$nulls":6},20,"N","F"]
[29146,"N",0,{"$nulls":6},20,"N","F"]
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[29148,"N",5,{"$nulls":6},20,"N","F","missense_variant","SNP","T->C:5","III","QHD43423.2:p.292I>T","gene-N:c.875aTc>aCc",2.08267E-6,0.00349411,"MODERATE","2020-04-13 00:26:30"]
[29149,"N",1,{"$nulls":6},20,"N","F","synonymous_variant","SNP","C->T:1","III","QHD43423.2:p.292I","gene-N:c.876atC>atT","9.62482e-9",6.88913e-05,"LOW","2020-04-13 00:26:30"]
[29150,"N",0,{"$nulls":6},20,"N","F"]
[29151,"N",0,{"$nulls":6},20,"N","F"]
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[29166,"N",0,21,"N","F",{"$nulls":3},20,"N","F"]
[29167,"N",4,21,"N","F",{"$nulls":6},"synonymous_variant","SNP","C->T:4","III","QHD43423.2:p.298Y","gene-N:c.894taC>taT","9.90352e-8","4.5741e-7","LOW","2020-04-13 00:26:30"]
[29168,"N",0,21,"N","F"]
[29169,"N",0,21,"N","F"]
[29170,"N",0,21,"N","F"]
[29171,"N",0,21,"N","F"]
[29172,"N",0,21,"N","F"]
[29173,"N",1,21,"N","F",{"$nulls":6},"coding_sequence_variant","SNP","T->Y:1","III","QHD43423.2:p.300-","gene-N:c.900caT>caY","1.04183e-7",0.000844595,"MODIFIER","2020-04-13 00:26:30"]
[29174,"N",0,21,"N","F"]
[29175,"N",0,21,"N","F"]
[29176,"N",0,21,"N","F"]
[29177,"N",0,21,"N","F"]
[29178,"N",0,21,"N","F"]
[29179,"N",2,21,"N","F",{"$nulls":3},20,"N","P","synonymous_variant","SNP","G->T:2","III","QHD43423.2:p.302P","gene-N:c.906ccG>ccT","2.31169e-8","2.8639e-7","LOW","2020-04-13 00:26:30"]
[29180,"N",0,21,"N","F",{"$nulls":3},20,"N","P"]
[29181,"N",0,21,"N","F",{"$nulls":3},20,"N","P"]
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[29183,"N",0,21,"N","F",{"$nulls":3},20,"N","P"]
[29184,"N",0,{"$nulls":6},20,"N","P"]
[29185,"N",0,{"$nulls":6},20,"N","P"]
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[29187,"N",0,{"$nulls":6},20,"N","P"]
[29188,"N",2,21,"N","P",{"$nulls":3},20,"N","P","synonymous_variant","SNP","A->T:2","III","QHD43423.2:p.305A","gene-N:c.915gcA>gcT","2.93156e-8","4.37838e-8","LOW","2020-04-13 00:26:30"]
[29189,"N",0,21,"N","P",{"$nulls":3},20,"N","P"]
[29190,"N",0,21,"N","P",{"$nulls":3},20,"N","P"]
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[29193,"N",0,21,"N","P",{"$nulls":3},20,"N","P"]
[29194,"N",0,21,"N","P",{"$nulls":3},20,"N","P"]
[29195,"N",1,21,"N","P",{"$nulls":3},20,"N","P","missense_variant","SNP","G->T:1","III","QHD43423.2:p.308A>S","gene-N:c.922Gcc>Tcc","6.57906e-8","2.27162e-7","MODERATE","2020-04-13 00:26:30"]
[29196,"N",0,21,"N","P",{"$nulls":3},20,"N","P"]
[29197,"N",0,21,"N","P",{"$nulls":3},20,"N","P"]
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[29199,"N",0,21,"N","P"]
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[29201,"N",0,21,"N","P"]
[29202,"N",0,21,"N","P"]
[29203,"N",0,21,"N","P"]
[29204,"N",0,21,"N","P"]
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[29207,"N",0,21,"N","P"]
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[29213,"N",0,21,"N","R"]
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[29228,"N",0,21,"N","R",19,"N","P"]
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[29231,"N",0,{"$nulls":3},19,"N","P"]
[29232,"N",0,{"$nulls":3},19,"N","P"]
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[29235,"N",0,{"$nulls":3},19,"N","P"]
[29236,"N",0,{"$nulls":3},19,"N","P",20,"N","R"]
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[29238,"N",1,{"$nulls":3},19,"N","P",20,"N","R","missense_variant","SNP","T->C:1","III","QHD43423.2:p.322M>T","gene-N:c.965aTg>aCg","2.65512e-9","8.44595e-8","MODERATE","2020-04-13 00:26:30"]
[29239,"N",3,{"$nulls":3},19,"N","P",20,"N","R","missense_variant","SNP","G->A:2; G-> T:1","III","QHD43423.2:p.322M>I","gene-N:c.966atG>atA; gene-N:c.966atG>atT","6.27695e-7",1.61053E-5,"MODERATE","2020-04-13 00:26:30"]
[29240,"N",0,{"$nulls":3},19,"N","P",20,"N","R"]
[29241,"N",0,{"$nulls":3},19,"N","P",20,"N","R"]
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[29243,"N",0,{"$nulls":6},20,"N","R"]
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[29245,"N",0,{"$nulls":6},20,"N","R"]
[29246,"N",0,{"$nulls":6},20,"N","R"]
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[29248,"N",0,{"$nulls":6},20,"N","R"]
[29249,"N",0,{"$nulls":6},20,"N","R"]
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[29251,"N",0,{"$nulls":6},20,"N","R"]
[29252,"N",0,{"$nulls":6},20,"N","R"]
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[29254,"N",3,{"$nulls":6},20,"N","R","synonymous_variant","SNP","G->T:3","III","QHD43423.2:p.327S","gene-N:c.981tcG>tcT","1.34622e-7",1.12559E-4,"LOW","2020-04-13 00:26:30"]
[29263,"N",0,{"$nulls":3},19,"N","R"]
[29264,"N",0,{"$nulls":3},19,"N","R"]
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[29267,"N",0,{"$nulls":3},19,"N","R"]
[29268,"N",0,{"$nulls":3},19,"N","R"]
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[29273,"N",0,{"$nulls":3},19,"N","R"]
[29274,"N",1,{"$nulls":3},19,"N","R",{"$nulls":3},"missense_variant","SNP","C->T:1","III","QHD43423.2:p.334T>I","gene-N:c.1001aCa>aTa","1.21047e-8","1.09459e-8","MODERATE","2020-04-13 00:26:31"]
[29275,"N",0,{"$nulls":3},19,"N","R"]
[29276,"N",0,{"$nulls":3},19,"N","R"]
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