Pop	SNP	Chromosome	Position	Coef	pval	MAC_6RW	MAF_6RW	MAC_2RW	MAF_2RW	MAC_6RS	MAF_6RS	MAC_2RS	MAF_2RS	PVE_6RW	PVE_2RW	PVE_6RS	PVE_2RS	Gene	Annotation	Status	Distance
6RW	SNP11903	5H	463278884	-0.67	1.82E-07	31	0.03	53	0.02	2	<0.01	829	0.11	9.4	-	-	-	HORVU.MOREX.r3.5HG0487140	RNA-binding protein	within gene	0 bp
6RW	SNP6138	5H	463279006	-0.67	1.82E-07	31	0.03	53	0.02	2	<0.01	830	0.11	9.4	-	-	-	HORVU.MOREX.r3.5HG0487140	RNA-binding protein	within gene	0 bp
6RW	SNP924	5H	464126596	-0.67	1.82E-07	31	0.03	53	0.02	2	<0.01	833	0.11	9.4	-	-	-	HORVU.MOREX.r3.5HG0487290	Nucleotide/sugar transporter family protein	within gene	0 bp
6RW	SNP4803	5H	464498204	-0.57	8.13E-07	37	0.03	63	0.02	42	0.03	3635	0.50	8.0	-	-	-	HORVU.MOREX.r3.5HG0487460	transcription factor, putative (Protein of unknown function, DUF547)	within gene	0 bp
6RW	SNP721	5H	465350853	-0.67	1.82E-07	31	0.03	63	0.02	307	0.24	3542	0.49	9.4	-	-	-	HORVU.MOREX.r3.5HG0487570	Carbonic anhydrase	within gene	0 bp
6RW	SNP7621	5H	467301344	0.61	8.55E-07	34	0.03	1176	0.36	38	0.03	3592	0.49	8.6	-	-	-	HORVU.MOREX.r3.5HG0487770	GRAM-containing/ABA-responsive protein	outside gene	550 bp downstream
6RW	SNP10020	5H	467409447	0.62	4.97E-07	33	0.03	1176	0.36	50	0.04	3573	0.49	8.6	-	-	-	HORVU.MOREX.r3.5HG0487790	Cyclin family protein	outside gene	4322 bp upstream
6RW	SNP9197	5H	470373463	-0.67	2.70E-08	47	0.04	45	0.01	0	0	52	<0.01	14.2	-	-	-	HORVU.MOREX.r3.5HG0488440	Succinate--CoA ligase [ADP-forming] subunit beta	within gene	0 bp
6RW	SNP2590	5H	470442284	-0.58	1.29E-07	53	0.05	45	0.01	6	<0.01	2965	0.41	11.8	-	-	-	HORVU.MOREX.r3.5HG0488450	Disease resistance protein (TIR-NBS-LRR class) family	within gene	0 bp
2RW	SNP5003	6H	8185797	-0.38	5.00E-09	251	0.22	1328	0.41	0	0	59	<0.01	-	17.6	-	-	HORVU.MOREX.r3.6HG0541400	Ubiquitin-conjugating enzyme E2, putative	within gene	0 bp
2RW	SNP6275	6H	8478835	0.33	3.47E-08	270	0.23	1263	0.39	64	0.05	216	0.03	-	13.4	-	-	HORVU.MOREX.r3.6HG0541500	Mitochondrial transcription termination factor-like	within gene	0 bp
2RW	SNP10684	6H	8500898	0.31	9.92E-08	256	0.22	1468	0.45	64	0.05	404	0.06	-	12.2	-	-	HORVU.MOREX.r3.6HG0541510	COPII coat assembly protein sec16	within gene	0 bp
2RW	SNP11460	6H	8564087	-0.61	1.16E-20	0	0	1420	0.43	461	0.36	169	0.02	-	46.2	-	-	HORVU.MOREX.r3.6HG0541580	Aspartate aminotransferase	within gene	0 bp
2RW	SNP5689	6H	8600410	0.28	5.70E-07	405	0.35	1307	0.40	258	0.20	168	0.02	-	9.9	-	-	HORVU.MOREX.r3.6HG0541650	Mitochondrial transcription termination factor-like	within gene	0 bp
2RW	SNP6143	6H	9079863	-0.32	8.99E-09	428	0.37	1281	0.39	393	0.31	137	0.02	-	12.2	-	-	HORVU.MOREX.r3.6HG0541910	Protein kinase-like	within gene	0 bp
2RW	SNP6460	6H	9409688	-0.42	5.82E-14	172	0.15	1306	0.40	395	0.31	18	<0.01	-	21.0	-	-	HORVU.MOREX.r3.6HG0542020	NBS-LRR resistance-like protein	within gene	0 bp
2RW	SNP11275	6H	9839762	-0.27	6.90E-08	171	0.15	1004	0.31	153	0.12	223	0.03	-	7.8	-	-	HORVU.MOREX.r3.6HG0542190	F-box domain containing protein	within gene	0 bp
2RW	SNP9836	6H	10100689	-0.38	2.45E-10	414	0.36	1519	0.46	0	0	227	0.03	-	18.2	-	-	HORVU.MOREX.r3.6HG0542310	Transmembrane protein	within gene	0 bp
2RW	SNP2593	6H	10249822	-0.30	3.71E-07	418	0.36	1440	0.44	0	0	225	0.03	-	11.6	-	-	HORVU.MOREX.r3.6HG0542360	U5 small nuclear ribonucleoprotein helicase	within gene	0 bp
2RW	SNP7521	6H	10253544	-0.30	3.71E-07	418	0.36	1440	0.44	0	0	226	0.03	-	11.6	-	-	HORVU.MOREX.r3.6HG0542360	U5 small nuclear ribonucleoprotein helicase	within gene	0 bp
2RW	SNP10001	6H	10922068	-0.29	1.73E-06	521	0.45	1446	0.44	526	0.42	228	0.03	-	10.2	-	-	HORVU.MOREX.r3.6HG0542630	ARM repeat superfamily protein	within gene	0 bp
2RW	SNP11636	6H	11112747	0.27	2.25E-06	529	0.46	1273	0.39	133	0.11	66	<0.01	-	8.9	-	-	HORVU.MOREX.r3.6HG0542730	Protein KINESIN LIGHT CHAIN-RELATED 3	within gene	0 bp
2RW	SNP5672	6H	11114498	0.27	2.66E-06	529	0.46	1277	0.39	133	0.11	66	<0.01	-	8.7	-	-	HORVU.MOREX.r3.6HG0542730	Protein KINESIN LIGHT CHAIN-RELATED 3	outside gene	2218 bp downstream
2RW	SNP2982	6H	11407986	0.36	8.71E-10	255	0.22	1564	0.48	13	0.01	224	0.03	-	16.0	-	-	HORVU.MOREX.r3.6HG0542780	Methionine--tRNA ligase	within gene	0 bp
2RW	SNP4404	6H	12209320	0.35	2.55E-09	254	0.22	1565	0.48	535	0.42	225	0.03	-	15.3	-	-	HORVU.MOREX.r3.6HG0542950	Pentatricopeptide repeat-containing protein	within gene	0 bp
6RS	SNP5929	2H	3757819	-0.38	1.74E-07	333	0.29	1054	0.32	494	0.39	236	0.03	-	-	12.2	-	HORVU.MOREX.r3.2HG0097220	phytanoyl-CoA dioxygenase (PhyH) family protein	within gene	0 bp
6RS	SNP12436	2H	3758616	-0.44	5.76E-09	112	0.10	1038	0.32	500	0.40	225	0.03	-	-	16.0	-	HORVU.MOREX.r3.2HG0097230	Retrovirus-related Pol polyprotein from transposon TNT 1-94	within gene	0 bp
6RS	SNP13040	2H	4109951	-0.43	1.52E-08	115	0.10	1062	0.32	511	0.40	239	0.03	-	-	15.6	-	HORVU.MOREX.r3.2HG0097330	Laccase	within gene	0 bp
6RS	SNP5891	2H	4217522	-0.42	1.82E-08	115	0.10	1050	0.32	514	0.41	293	0.04	-	-	15.1	-	HORVU.MOREX.r3.2HG0097350	Agmatine coumaroyltransferase-2	outside gene	479 bp downstream
6RS	SNP198	2H	4437873	-0.43	9.09E-09	113	0.10	984	0.3	511	0.40	234	0.03	-	-	16.1	-	HORVU.MOREX.r3.2HG0097390	Inosine-5'-monophosphate dehydrogenase	within gene	0 bp
6RS	SNP5977	2H	5077584	0.65	3.45E-15	148	0.13	21	<0.01	390	0.31	1	<0.01	-	-	32.2	-	HORVU.MOREX.r3.2HG0097600	Protein DA1-related 1	within gene	0 bp
6RS	SNP7243	2H	5088241	0.66	2.08E-15	148	0.13	21	<0.01	386	0.31	6	<0.01	-	-	32.7	-	HORVU.MOREX.r3.2HG0097610	Serine-rich 25 kDa antigen protein	within gene	0 bp
6RS	SNP12258	2H	5088355	-0.67	9.24E-16	199	0.17	1189	0.36	398	0.31	2524	0.35	-	-	34.3	-	HORVU.MOREX.r3.2HG0097610	Serine-rich 25 kDa antigen protein	within gene	0 bp
6RS	SNP4564	2H	5121047	0.67	5.46E-17	228	0.20	1195	0.36	423	0.33	88	0.01	-	-	35.3	-	HORVU.MOREX.r3.2HG0097640	Protein kinase	within gene	0 bp
2RS	SNP7246	3H	1668436	-0.38	7.60E-07	209	0.18	1053	0.32	0	0	175	0.02	-	-	-	3.2	HORVU.MOREX.r3.3HG0218560	Receptor-like protein kinase	outside gene	1548 bp downstream
2RS	SNP13	3H	1875854	-0.39	7.09E-07	202	0.17	179	0.05	23	0.02	174	0.02	-	-	-	3.3	HORVU.MOREX.r3.3HG0218760	Beta-glucosidase	outside gene	1678 bp upstream
2RS	SNP2668	3H	1977107	-0.40	8.00E-07	284	0.24	1601	0.49	20	0.02	169	0.02	-	-	-	3.3	HORVU.MOREX.r3.3HG0218880	Serine/threonine-protein kinase	within gene	0 bp
2RS	SNP3736	3H	2025578	-0.40	8.00E-07	239	0.21	179	0.05	20	0.02	169	0.02	-	-	-	3.3	HORVU.MOREX.r3.3HG0218950	Serine/threonine-protein kinase	within gene	0 bp
2RS	SNP827	3H	2093192	-0.37	2.70E-06	313	0.27	207	0.06	24	0.02	171	0.02	-	-	-	3.0	HORVU.MOREX.r3.3HG0219040	3-ketoacyl-CoA thiolase	outside gene	236 bp downstream
2RS	SNP1315	3H	2098472	-0.40	8.00E-07	259	0.22	181	0.06	0	0	169	0.02	-	-	-	3.3	HORVU.MOREX.r3.3HG0219050	Receptor-like kinase	within gene	0 bp
2RS	SNP87	3H	2100677	-0.39	2.87E-07	263	0.23	182	0.06	0	0	177	0.02	-	-	-	3.5	HORVU.MOREX.r3.3HG0219060	myo-inositol oxygenase 1	within gene	0 bp
2RS	SNP5244	3H	2191103	-0.38	2.20E-06	283	0.24	180	0.05	20	0.02	170	0.02	-	-	-	3.1	HORVU.MOREX.r3.3HG0219160	Protein decapping 5	within gene	0 bp
2RS	SNP7368	3H	2499333	-0.40	8.00E-07	220	0.19	610	0.19	0	0	169	0.02	-	-	-	3.3	HORVU.MOREX.r3.3HG0219330	50S ribosomal protein L6	within gene	0 bp
2RS	SNP8380	3H	3854244	-0.40	1.96E-07	0	0	0	0	37	0.03	175	0.02	-	-	-	3.5	HORVU.MOREX.r3.3HG0220170	nuclear factor Y, subunit B8	within gene	0 bp
2RS	SNP5809	3H	5281870	-0.42	1.04e-07	134	0.12	111	0.03	10	<0.01	173	0.02	-	-	-	3.8	HORVU.MOREX.r3.3HG0220900	Cellulose synthase-like protein	within gene	0 bp
2RS	SNP576	3H	5723647	-0.39	4.88E-08	0	0	633	0.19	204	0.16	182	0.03	-	-	-	3.4	HORVU.MOREX.r3.3HG0221100	ATP-dependent RNA helicase, putative	within gene	0 bp
2RS	SNP12434	3H	6032885	-0.41	4.63E-19	97	0.08	614	0.19	429	0.34	330	0.05	-	-	-	6.8	HORVU.MOREX.r3.3HG0221340	Glycine-rich domain-containing protein 2	within gene	0 bp
2RS	SNP4643	3H	6098759	-0.23	1.80E-10	107	0.09	854	0.26	570	0.45	950	0.13	-	-	-	5.9	HORVU.MOREX.r3.3HG0221440	Glycosyltransferase	within gene	0 bp
2RS	SNP8371	3H	6257342	-0.23	9.97E-10	106	0.09	1435	0.44	586	0.46	939	0.13	-	-	-	5.5	HORVU.MOREX.r3.3HG0221450	UPF0358 protein BcerKBAB4_3775	outside gene	233 bp downstream
2RS	SNP605	3H	6260961	-0.24	2.34E-10	106	0.09	1435	0.44	567	0.45	934	0.13	-	-	-	5.9	HORVU.MOREX.r3.3HG0221460	Glycosyltransferase	within gene	0 bp
2RS	SNP5638	3H	6261438	-0.23	7.91-10	1	<0.01	650	0.20	567	0.45	925	0.13	-	-	-	5.5	HORVU.MOREX.r3.3HG0221460	Glycosyltransferase	outside gene	240 bp downstream
2RS	SNP6851	3H	6712517	-0.21	1.17E-08	2	<0.01	650	0.20	578	0.46	945	0.13	-	-	-	4.7	HORVU.MOREX.r3.3HG0221630	Ethylene-responsive transcription factor	within gene	0 bp
2RS	SNP3557	3H	8849184	-0.15	2.60Ee-06	272	0.23	957	0.29	623	0.49	947	0.13	-	-	-	2.4	HORVU.MOREX.r3.3HG0222630	Protein ABCI7, chloroplastic	within gene	0 bp
2RS	SNP1631	3H	8850348	-0.17	1.74E-10	261	0.22	728	0.22	625	0.49	2916	0.40	-	-	-	6.8	HORVU.MOREX.r3.3HG0222630	Protein ABCI7, chloroplastic	outside gene	1803 bp upstream
2RS	SNP12909	3H	9182498	-0.20	4.52E-08	54	0.05	478	0.15	625	0.49	795	0.11	-	-	-	3.9	HORVU.MOREX.r3.3HG0222770	Ubiquitin-conjugating enzyme E2	within gene	0 bp
2RS	SNP301	3H	9182522	-0.20	4.52E-08	54	0.05	495	0.15	625	0.49	795	0.11	-	-	-	3.9	HORVU.MOREX.r3.3HG0222770	Ubiquitin-conjugating enzyme E2	within gene	0 bp
2RS	SNP180	3H	12322905	-0.23	3.78E-06	0	0	1	<0.01	186	0.15	455	0.06	-	-	-	3.0	HORVU.MOREX.r3.3HG0224620	Sarcoplasmic reticulum histidine-rich calcium-binding protein, putative, expressed	within gene	0 bp
2RS	SNP6839	5H	468392106	0.16	3.40E-08	68	0.06	667	0.20	484	0.38	3402	0.47	-	-	-	6.2	HORVU.MOREX.r3.5HG0488090	1,4-alpha-glucan branching enzyme GlgB	within gene	0 bp
2RS	SNP2617	5H	468899311	0.20	1.81E-08	76	0.07	707	0.22	485	0.38	3359	0.46	-	-	-	9.0	HORVU.MOREX.r3.5HG0488170	Homeobox protein, putative	within gene	0 bp
2RS	SNP12233	5H	469057208	0.17	4.92E-07	70	0.06	707	0.22	23	0.02	3349	0.46	-	-	-	7.1	HORVU.MOREX.r3.5HG0488200	Peroxidase	within gene	0 bp
2RS	SNP12103	5H	469555931	-0.34	4.13E-15	2	<0.01	1285	0.39	20	0.02	429	0.06	-	-	-	5.9	HORVU.MOREX.r3.5HG0488290	Ribosomal RNA small subunit methyltransferase F	outside gene	260 bp upstream
2RS	SNP147	5H	527203338	-0.24	1.52E-06	378	0.33	867	0.26	21	0.02	314	0.04	-	-	-	2.3	HORVU.MOREX.r3.5HG0510760	Protein kinase	within gene	0 bp
2RS	SNP913	5H	527206555	-0.26	4.61E-07	383	0.33	884	0.27	21	0.02	317	0.04	-	-	-	2.6	HORVU.MOREX.r3.5HG0510760	Protein kinase	within gene	0 bp
2RS	SNP10870	5H	534458523	-0.23	3.27E-10	104	0.09	4	<0.01	151	0.12	1540	0.21	-	-	-	8.6	HORVU.MOREX.r3.5HG0513360	E3 ubiquitin-protein ligase MARCH6	within gene	0 bp
2RS	SNP901	5H	535610053	-0.28	2.48E-12	66	0.06	0	0	31	0.02	1173	0.16	-	-	-	9.8	HORVU.MOREX.r3.5HG0513720	Signal transducing adapter molecule 2	within gene	0 bp
2RS	SNP10936	5H	536258712	-0.18	2.60E-06	128	0.11	398	0.12	179	0.14	3039	0.42	-	-	-	7.8	HORVU.MOREX.r3.5HG0513990	Nitrate transporter 1.1	within gene	0 bp
2RS	SNP12683	5H	536277957	-0.23	7.31E-08	2	<0.01	2	<0.01	26	0.02	2721	0.37	-	-	-	11.5	HORVU.MOREX.r3.5HG0514020	GRAS transcription factor	within gene	0 bp
2RS	SNP172	5H	536277977	-0.23	8.69E-08	2	<0.01	2	<0.01	26	0.02	2719	0.37	-	-	-	11.4	HORVU.MOREX.r3.5HG0514020	GRAS transcription factor	within gene	0 bp
2RS	SNP8700	5H	536285731	-0.20	7.67E-08	68	0.06	3	<0.01	340	0.27	2804	0.39	-	-	-	9.2	HORVU.MOREX.r3.5HG0514040	Protein RETICULATA-RELATED 4, chloroplastic	within gene	0 bp
2RS	SNP9324	5H	536492802	-0.24	1.34E-08	1	<0.01	0	0	27	0.02	2721	0.37	-	-	-	12.7	HORVU.MOREX.r3.5HG0514110	F-box domain containing protein	within gene	0 bp
2RS	SNP5972	5H	536730207	-0.22	4.09E-08	0	0	0	0	27	0.02	2718	0.37	-	-	-	11.0	HORVU.MOREX.r3.5HG0514190	Long-Chain Acyl-CoA Synthetase	within gene	0 bp
2RS	SNP6276	5H	537215281	-0.22	4.83E-08	1	<0.01	0	0	26	0.02	2714	0.37	-	-	-	10.3	HORVU.MOREX.r3.5HG0514410	transmembrane protein, putative (DUF1068)	within gene	0 bp