{"text_format":"3","workbook":"xlsx","n_sheets":15,"sheets":["Table S1","Table S2","Table S3","Table S4","Table S5","Table S6","Table S7","Table S8","Table S9","Table S10","Table S11","Table S12","Table S13","Table S14","Table S15"],"read":"whole","date_system":"1900"}

{"sheet":"Table S1","index":0,"n_rows":13,"n_cols":10,"rows_kept":13,"merged":[[1,1,1,3],[1,4,1,6],[1,7,1,9]]}
["Supplementary Table 1. Summary of Oxford Nanopore sequencing reads."]
["Species","G. rotundifolium (K2)",null,null,"G. arboreum (A2)",null,null,"G. raimondii (D5)"]
["Length","Reads Num","Total Length","Ave Length","Reads Num","Total Length","Ave Length","Reads Num","Total Length","Ave Length"]
["2000~5000",{"v":808948,"d":"808,948"},{"v":2782637543,"d":"2,782,637,543"},{"v":3439.82,"d":"3,439.82"},{"v":464763,"d":"464,763"},{"v":1624265769,"d":"1,624,265,769"},{"v":3494.82,"d":"3,494.82"},{"v":325654,"d":"325,654"},{"v":1123457621,"d":"1,123,457,621"},{"v":3450,"d":"3,450"}]
["5000~10000",{"v":1096464,"d":"1,096,464"},{"v":8117287082,"d":"8,117,287,082"},{"v":7403.14,"d":"7,403.14"},{"v":731737,"d":"731,737"},{"v":5454060073,"d":"5,454,060,073"},{"v":7453.57,"d":"7,453.57"},{"v":505036,"d":"505,036"},{"v":3767728220,"d":"3,767,728,220"},{"v":7460,"d":"7,460"}]
["10000~20000",{"v":1959883,"d":"1,959,883"},{"v":30195782069,"d":"30,195,782,069"},{"v":15406.93,"d":"15,406.93"},{"v":3220249,"d":"3,220,249"},{"v":49352329340,"d":"49,352,329,340"},{"v":15325.62,"d":"15,325.62"},{"v":1966368,"d":"1,966,368"},{"v":31474553561,"d":"31,474,553,561"},{"v":16006,"d":"16,006"}]
["20000~30000",{"v":3615484,"d":"3,615,484"},{"v":90745979632,"d":"90,745,979,632"},{"v":25099.26,"d":"25,099.26"},{"v":2073795,"d":"2,073,795"},{"v":50701156228,"d":"50,701,156,228"},{"v":24448.48,"d":"24,448.48"},{"v":1658875,"d":"1,658,875"},{"v":40323025685,"d":"40,323,025,685"},{"v":24307,"d":"24,307"}]
["30000~40000",{"v":2279809,"d":"2,279,809"},{"v":78344378804,"d":"78,344,378,804"},{"v":34364.44,"d":"34,364.44"},{"v":1126278,"d":"1,126,278"},{"v":38867775786,"d":"38,867,775,786"},{"v":34509.93,"d":"34,509.93"},{"v":745843,"d":"745,843"},{"v":25626388840,"d":"25,626,388,840"},{"v":34359,"d":"34,359"}]
["40000~50000",{"v":1111457,"d":"1,111,457"},{"v":49379680271,"d":"49,379,680,271"},{"v":44427.88,"d":"44,427.88"},{"v":613410,"d":"613,410"},{"v":27284407358,"d":"27,284,407,358"},{"v":44479.88,"d":"44,479.88"},{"v":318597,"d":"318,597"},{"v":14082520427,"d":"14,082,520,427"},{"v":44202,"d":"44,202"}]
["50000~60000",{"v":523930,"d":"523,930"},{"v":28434035378,"d":"28,434,035,378"},{"v":54270.67,"d":"54,270.67"},{"v":313770,"d":"313,770"},{"v":17073120259,"d":"17,073,120,259"},{"v":54412.85,"d":"54,412.85"},{"v":110168,"d":"110,168"},{"v":5953567659,"d":"5,953,567,659"},{"v":54041,"d":"54,041"}]
["60000~70000",{"v":181086,"d":"181,086"},{"v":11584737066,"d":"11,584,737,066"},{"v":63973.67,"d":"63,973.67"},{"v":153195,"d":"153,195"},{"v":9865276937,"d":"9,865,276,937"},{"v":64396.85,"d":"64,396.85"},{"v":31306,"d":"31,306"},{"v":2000174113,"d":"2,000,174,113"},{"v":63891,"d":"63,891"}]
["70000~80000",{"v":46179,"d":"46,179"},{"v":3407836930,"d":"3,407,836,930"},{"v":73796.24,"d":"73,796.24"},{"v":73799,"d":"73,799"},{"v":5491996235,"d":"5,491,996,235"},{"v":74418.3,"d":"74,418.30"},{"v":7536,"d":"7,536"},{"v":555912303,"d":"555,912,303"},{"v":73768,"d":"73,768"}]
[">=80000",{"v":13925,"d":"13,925"},{"v":1224098821,"d":"1,224,098,821"},{"v":87906.55,"d":"87,906.55"},{"v":66083,"d":"66,083"},{"v":6119782010,"d":"6,119,782,010"},{"v":92607.5,"d":"92,607.50"},{"v":2356,"d":"2,356"},{"v":209814089,"d":"209,814,089"},{"v":89055,"d":"89,055"}]

{"sheet":"Table S2","index":1,"n_rows":7,"n_cols":4,"rows_kept":7}
["Supplementary Table 2. Mapping ratio of paired-end sequencing reads to intial contigs."]
["Categroy","K2","A2","D5"]
["Total reads",{"v":882738543,"d":"882,738,543"},{"v":637609260,"d":"637,609,260"},{"v":329863010,"d":"329,863,010"}]
["Mapped reads",{"v":875125308,"d":"875,125,308"},{"v":633862683,"d":"633,862,683"},{"v":321105252,"d":"321,105,252"}]
["Mapped (%)",{"v":0.9914,"d":"99.14%"},{"v":0.9941,"d":"99.41%"},{"v":0.9735,"d":"97.35%"}]
["Properly mapped reads",{"v":794635470,"d":"794,635,470"},{"v":594956931,"d":"594,956,931"},{"v":311263765,"d":"311,263,765"}]
["Properly mapped (%)",{"v":0.9002,"d":"90.02%"},{"v":0.9331,"d":"93.31%"},{"v":0.9436,"d":"94.36%"}]

{"sheet":"Table S3","index":2,"n_rows":12,"n_cols":4,"rows_kept":12}
["Supplementary Table 3. Statistics of Core Eukaryotic Genes Mapping Approach (CEGMA) and  Benchmarking Universal Single-Copy Orthologs (BUSCO) estimating genome assemblies."]
["Species","K2","A2","D5"]
["Number of 458 CEG present in assembly",450,447,451]
["Percentage of 458 CEGs present in assemblies (%)",{"v":0.9825,"d":"98.25%"},{"v":0.976,"d":"97.60%"},{"v":0.9847,"d":"98.47%"}]
["Number of 248 highly conserved CEGs present",234,235,236]
["Percentage of 248 highly conserved CEGs present (%)",{"v":0.9435,"d":"94.35%"},{"v":0.9476,"d":"94.76%"},{"v":0.9516,"d":"95.16%"}]
["Complete BUSCOs (C)","1332 (92.50%)","1352 (93.89%)","1374 (95.42%)"]
["Complete and single-copy BUSCOs (S)","1214 (84.31%)","1223 (84.93%)","1218 (84.58%)"]
["Complete and duplicated BUSCOs (D)","118 (8.19%)","129 (8.96%)","156 (10.83%)"]
["Fragmented BUSCOs (F)","19 (1.32%)","17 (1.18%)","13 (0.90%)"]
["Missing BUSCOs (M)","89 (6.18%)","71 (4.93%)","53 (3.68%)"]
["Total Lineage BUSCOs",{"v":1440,"d":"1,440"},{"v":1440,"d":"1,440"},1440]

{"sheet":"Table S4","index":3,"n_rows":10,"n_cols":4,"rows_kept":10}
["Supplementary Table 4. Comparing A2 genome with previously published genome version."]
["Genomic feature","HAU_A2","WHU_A2","ICR_A2"]
["Total assemblied size, bp",{"v":1621030562,"d":"1,621,030,562"},{"v":1636985834,"d":"1,636,985,834"},{"v":1710104083,"d":"1,710,104,083"}]
["Number of total scaffolds",948,{"v":1269,"d":"1,269"},{"v":4516,"d":"4,516"}]
["Total length of gaps, bp",{"v":22500,"d":"22,500"},{"v":116300,"d":"116,300"},{"v":3730000,"d":"3,730,000"}]
["Contig N50, bp",{"v":11691474,"d":"11,691,474"},{"v":1832000,"d":"1,832,000"},{"v":1100000,"d":"1,100,000"}]
["Scaffold N50, bp",{"v":129592444,"d":"129,592,444"},{"v":118841821,"d":"118,841,821"},{"v":113035596,"d":"113,035,596"}]
["Scaffold N90, bp",{"v":93157762,"d":"93,157,762"},{"v":87096684,"d":"87,096,684"},{"v":162124,"d":"162,124"}]
["Percentage of anchoring and ordering",{"v":0.9884,"d":"98.84%"},{"v":0.9219,"d":"92.19%"},{"v":0.8594,"d":"85.94%"}]
["Number of genes",{"v":41778,"d":"41,778"},{"v":43278,"d":"43,278"},{"v":40960,"d":"40,960"}]

{"sheet":"Table S5","index":4,"n_rows":10,"n_cols":4,"rows_kept":10}
["Supplementary Table 5. Comparing D5 genome with previously published genome version."]
["Genomic feature","HAU_D5","USDA_D5","JGI_D5"]
["Total assemblied size, bp",{"v":750197587,"d":"750,197,587"},{"v":734884094,"d":"734,884,094"},{"v":761406121,"d":"761,406,121"}]
["Number of total scaffolds",287,"-",{"v":1033,"d":"1,033"}]
["Total length of gaps, bp",{"v":7900,"d":"7,900"},{"v":17400,"d":"17,400"},{"v":1870200,"d":"1,870,200"}]
["Contig N50, bp",{"v":17043680,"d":"17,043,680"},{"v":6291832,"d":"6,291,832"},{"v":136998,"d":"136,998"}]
["Scaffold N50, bp",{"v":57716579,"d":"57,716,579"},{"v":58819159,"d":"58,819,159"},{"v":62175169,"d":"62,175,169"}]
["Scaffold N90, bp",{"v":49929625,"d":"49,929,625"},{"v":46322098,"d":"46,322,098"},{"v":45765648,"d":"45,765,648"}]
["Percentage of anchoring and ordering",{"v":0.9901,"d":"99.01%"},"-",{"v":0.984,"d":"98.40%"}]
["Number of genes",{"v":40820,"d":"40,820"},{"v":41030,"d":"41,030"},{"v":37505,"d":"37,505"}]

{"sheet":"Table S6","index":5,"n_rows":11,"n_cols":7,"rows_kept":11,"merged":[[1,0,2,0],[1,1,1,2],[1,3,1,4],[1,5,1,6]]}
["Supplementary Table 6. Gene annotation against annotation database. The annotated percentage of genes aligning InterProScan, Swiss-prot, NR and TAIR10 database was calculated against the total gene number in three genomes (41,590 genes in Gossypium rotundifolium (K2) and 41,778 genes in G. arboreum (A2) and 40,820 genes in G. raimondii (D5)."]
["Database","K2",null,"A2",null,"D5"]
[null,"Gene number","Percentage","Gene number","Percentage","Gene number","Percentage"]
["Pfam",{"v":30833,"d":"30,833"},{"v":0.741356095215196,"d":"74.14%"},{"v":31422,"d":"31,422"},{"v":0.7521183397960649,"d":"75.21%"},{"v":30866,"d":"30,866"},{"v":0.7561489465948065,"d":"75.61%"}]
["SATase",{"v":29043,"d":"29,043"},{"v":0.6983169031017071,"d":"69.83%"},{"v":29547,"d":"29,547"},{"v":0.7072382593709607,"d":"70.72%"},{"v":29445,"d":"29,445"},{"v":0.7213375796178344,"d":"72.13%"}]
["GO",{"v":17810,"d":"17,810"},{"v":0.42822793940851167,"d":"42.82%"},{"v":18211,"d":"18,211"},{"v":0.4358992771315046,"d":"43.59%"},{"v":18412,"d":"18,412"},{"v":0.4510534051935326,"d":"45.11%"}]
["KEGG",{"v":2120,"d":"2,120"},{"v":0.05097379177686944,"d":"5.10%"},{"v":2205,"d":"2,205"},{"v":0.05277897457992245,"d":"5.28%"},{"v":2176,"d":"2,176"},{"v":0.05330720235178834,"d":"5.33%"}]
["Reactome",{"v":4910,"d":"4,910"},{"v":0.11805722529454196,"d":"11.81%"},{"v":5047,"d":"5,047"},{"v":0.12080520848293361,"d":"12.08%"},{"v":5110,"d":"5,110"},{"v":0.12518373346398823,"d":"12.52%"}]
["NR",{"v":41184,"d":"41,184"},{"v":0.9902380379899014,"d":"99.02%"},{"v":41624,"d":"41,624"},{"v":0.9963138493944181,"d":"99.63%"},{"v":40653,"d":"40,653"},{"v":0.9959088682018619,"d":"99.59%"}]
["TAIR10",{"v":21507,"d":"21,507"},{"v":0.5171194998797788,"d":"51.71%"},{"v":21491,"d":"21,491"},{"v":0.5144094978218201,"d":"51.44%"},{"v":22228,"d":"22,228"},{"v":0.5445369916707496,"d":"54.45%"}]
["Total Annotated",{"v":41184,"d":"41,184"},{"v":0.9902,"d":"99.02%"},{"v":41624,"d":"41,624"},{"v":0.9963,"d":"99.63%"},{"v":40653,"d":"40,653"},{"v":0.9959,"d":"99.59%"}]

{"sheet":"Table S7","index":6,"n_rows":14,"n_cols":4,"rows_kept":14}
["Supplementary Table 7. Non-coding RNAs annotation in three reference genomes."]
["Category","K2","A2","D5"]
["Number of snoRNA",16890,7742,2248]
["Number of snRNA",202,134,113]
["Number of tRNA",1796,1730,1344]
["Number of rRNA",1762,1294,2708]
["Number of miRNA",132,133,122]
["Number of total non-coding RNAs",{"$f":"SUM(B3:B7)","v":20782},{"$f":"SUM(C3:C7)","v":11033},6535]
["Number of snoRNA, bp",{"v":1785749,"d":"1,785,749"},{"v":237240,"d":"237,240"},{"v":1785749,"d":"1,785,749"}]
["Number of snRNA, bp",{"v":29640,"d":"29,640"},{"v":16888,"d":"16,888"},{"v":29640,"d":"29,640"}]
["Number of tRNA, bp",{"v":132627,"d":"132,627"},{"v":99246,"d":"99,246"},{"v":132627,"d":"132,627"}]
["Number of rRNA, bp",{"v":657506,"d":"657,506"},{"v":858471,"d":"858,471"},{"v":657506,"d":"657,506"}]
["Number of miRNA, bp",{"v":15221,"d":"15,221"},{"v":14102,"d":"14,102"},{"v":15221,"d":"15,221"}]
["Number of total non-coding RNAs, bp",{"$f":"SUM(B9:B13)","v":{"v":2620743,"d":"2,620,743"}},{"$f":"SUM(C9:C13)","v":{"v":1225947,"d":"1,225,947"}},{"v":2620743,"d":"2,620,743"}]

{"sheet":"Table S8","index":7,"n_rows":158,"n_cols":7,"rows_kept":158}
["Supplementary Table 8. Identification of centromeres in Gossypium rotundifolium (K2), G. arboreum (A2) and G. raimondii (D5) genomes. The query LTRs (GhCR1-GhCR4) were from the previous published sequences. The 95% confidence interval for the median (CIM) region was identified as the centromeres region for each chromosome. The 'NA' represent the non aligned genome position."]
["LTRs","Chr","Start","End","Size of 95% CIM (Mb)","Aligned number","Genome"]
["GhCR1_5'LTR","Chr01",94900000,103820000,{"v":8.919999999999987,"d":"8.92"},280,"K2"]
["GhCR1_5'LTR","Chr02",77040000,82530000,{"v":5.489999999999995,"d":"5.49"},259,"K2"]
["GhCR1_5'LTR","Chr03",103860000,127680000,{"v":23.820000000000007,"d":"23.82"},64,"K2"]
["GhCR1_5'LTR","Chr04",66750000,105650000,{"v":38.900000000000006,"d":"38.90"},24,"K2"]
["GhCR1_5'LTR","Chr05",50380000,58870000,{"v":8.489999999999995,"d":"8.49"},87,"K2"]
["GhCR1_5'LTR","Chr06",72420000,84380000,{"v":11.959999999999994,"d":"11.96"},219,"K2"]
["GhCR1_5'LTR","Chr07",78870000,104710000,{"v":25.83999999999999,"d":"25.84"},46,"K2"]
["GhCR1_5'LTR","Chr08",113230000,124810000,{"v":11.579999999999998,"d":"11.58"},221,"K2"]
["GhCR1_5'LTR","Chr09",54500000,59030000,{"v":4.530000000000001,"d":"4.53"},341,"K2"]
["GhCR1_5'LTR","Chr10",81120000,92310000,{"v":11.189999999999998,"d":"11.19"},132,"K2"]
["GhCR1_5'LTR","Chr11",68900000,82290000,13.39,102,"K2"]
["GhCR1_5'LTR","Chr12",75410000,94310000,{"v":18.900000000000006,"d":"18.90"},82,"K2"]
["GhCR1_5'LTR","Chr13",72880000,87340000,{"v":14.460000000000008,"d":"14.46"},72,"K2"]
["GhCR2_5'LTR","Chr01",98400000,114070000,{"v":15.669999999999987,"d":"15.67"},94,"K2"]
["GhCR2_5'LTR","Chr02",76630000,81630000,{"v":5,"d":"5.00"},354,"K2"]
["GhCR2_5'LTR","Chr03",126500000,144320000,{"v":17.819999999999993,"d":"17.82"},9,"K2"]
["GhCR2_5'LTR","Chr04","NA","NA",{"v":0,"d":"0.00"},1,"K2"]
["GhCR2_5'LTR","Chr05","NA","NA",{"v":0,"d":"0.00"},2,"K2"]
["GhCR2_5'LTR","Chr06","NA","NA",{"v":0,"d":"0.00"},1,"K2"]
["GhCR2_5'LTR","Chr07",99830000,111120000,{"v":11.290000000000006,"d":"11.29"},82,"K2"]
["GhCR2_5'LTR","Chr08",99940000,158300000,{"v":58.360000000000014,"d":"58.36"},8,"K2"]
["GhCR2_5'LTR","Chr09",54570000,61870000,{"v":7.299999999999997,"d":"7.30"},156,"K2"]
["GhCR2_5'LTR","Chr10",50770000,83780000,33.01,2,"K2"]
["GhCR2_5'LTR","Chr11",69990000,87910000,17.92,43,"K2"]
["GhCR2_5'LTR","Chr12",83870000,95360000,{"v":11.489999999999995,"d":"11.49"},133,"K2"]
["GhCR2_5'LTR","Chr13",103950000,111150000,{"v":7.200000000000003,"d":"7.20"},432,"K2"]
["GhCR3_5'LTR","Chr01",93160000,103840000,{"v":10.680000000000007,"d":"10.68"},199,"K2"]
["GhCR3_5'LTR","Chr02",79170000,83500000,{"v":4.329999999999998,"d":"4.33"},382,"K2"]
["GhCR3_5'LTR","Chr03",89840000,125990000,{"v":36.14999999999999,"d":"36.15"},20,"K2"]
["GhCR3_5'LTR","Chr04",75390000,105160000,{"v":29.769999999999996,"d":"29.77"},34,"K2"]
["GhCR3_5'LTR","Chr05",23430000,72320000,{"v":48.88999999999999,"d":"48.89"},11,"K2"]
["GhCR3_5'LTR","Chr06",73280000,85680000,{"v":12.400000000000006,"d":"12.40"},211,"K2"]
["GhCR3_5'LTR","Chr07",84540000,102500000,{"v":17.959999999999994,"d":"17.96"},79,"K2"]
["GhCR3_5'LTR","Chr08",108970000,119080000,10.11,247,"K2"]
["GhCR3_5'LTR","Chr09",55430000,60040000,{"v":4.609999999999999,"d":"4.61"},349,"K2"]
["GhCR3_5'LTR","Chr10",77050000,86090000,{"v":9.040000000000006,"d":"9.04"},217,"K2"]
["GhCR3_5'LTR","Chr11",72490000,85310000,{"v":9.939999999999998,"d":"9.94"},104,"K2"]
["GhCR3_5'LTR","Chr12",80410000,90350000,{"v":9.939999999999998,"d":"9.94"},188,"K2"]
["GhCR3_5'LTR","Chr13",84100000,91930000,{"v":7.8300000000000125,"d":"7.83"},77,"K2"]
["GhCR4_5'LTR","Chr01",92210000,101790000,{"v":9.580000000000013,"d":"9.58"},232,"K2"]
["GhCR4_5'LTR","Chr02",68110000,78310000,{"v":10.200000000000003,"d":"10.20"},122,"K2"]
["GhCR4_5'LTR","Chr03",91490000,98850000,{"v":7.359999999999999,"d":"7.36"},3,"K2"]
["GhCR4_5'LTR","Chr04",79330000,97910000,18.58,68,"K2"]
["GhCR4_5'LTR","Chr05",16880000,67410000,50.53,9,"K2"]
["GhCR4_5'LTR","Chr06",67080000,67080000,{"v":0,"d":"0.00"},1,"K2"]
["GhCR4_5'LTR","Chr07",84570000,101680000,{"v":17.110000000000014,"d":"17.11"},91,"K2"]
["GhCR4_5'LTR","Chr08",101190000,117300000,16.11,106,"K2"]
["GhCR4_5'LTR","Chr09",53780000,69430000,{"v":15.650000000000006,"d":"15.65"},40,"K2"]
["GhCR4_5'LTR","Chr10",50770000,83780000,33.01,24,"K2"]
["GhCR4_5'LTR","Chr11","NA","NA","NA",0,"K2"]
["GhCR4_5'LTR","Chr12","NA","NA","NA",0,"K2"]
["GhCR4_5'LTR","Chr13",84200000,87150000,{"v":2.950000000000003,"d":"2.95"},61,"K2"]
["GhCR1_5'LTR","Chr01",54060000,56380000,{"v":2.3200000000000003,"d":"2.32"},814,"A2"]
["GhCR1_5'LTR","Chr02",61420000,64989999.99999999,{"v":3.569999999999993,"d":"3.57"},596,"A2"]
["GhCR1_5'LTR","Chr03",74140000,79570000,{"v":5.429999999999993,"d":"5.43"},235,"A2"]
["GhCR1_5'LTR","Chr04",62600000,65580000,{"v":2.979999999999997,"d":"2.98"},222,"A2"]
["GhCR1_5'LTR","Chr05",52930000,54490000,{"v":1.5600000000000023,"d":"1.56"},366,"A2"]
["GhCR1_5'LTR","Chr06",68150000,70480000,{"v":2.3299999999999983,"d":"2.33"},646,"A2"]
["GhCR1_5'LTR","Chr07",32909999.999999996,35870000,{"v":2.960000000000001,"d":"2.96"},370,"A2"]
["GhCR1_5'LTR","Chr08",78360000,80760000,{"v":2.4000000000000057,"d":"2.40"},812,"A2"]
["GhCR1_5'LTR","Chr09",32570000,34050000,{"v":1.4799999999999969,"d":"1.48"},792,"A2"]
["GhCR1_5'LTR","Chr10",66519999.99999999,68730000,{"v":2.210000000000008,"d":"2.21"},566,"A2"]
["GhCR1_5'LTR","Chr11",74550000,77470000,{"v":2.9200000000000017,"d":"2.92"},398,"A2"]
["GhCR1_5'LTR","Chr12",32570000,34040000,{"v":1.4699999999999989,"d":"1.47"},231,"A2"]
["GhCR1_5'LTR","Chr13",54320000,57200000,{"v":2.8800000000000026,"d":"2.88"},247,"A2"]
["GhCR2_5'LTR","Chr01",51180000,55110000,{"v":3.9299999999999997,"d":"3.93"},399,"A2"]
["GhCR2_5'LTR","Chr02",59480000,62580000,{"v":3.1000000000000014,"d":"3.10"},760,"A2"]
["GhCR2_5'LTR","Chr03",73680000,78970000,{"v":5.289999999999992,"d":"5.29"},108,"A2"]
["GhCR2_5'LTR","Chr04",59560000,67620000,{"v":8.060000000000002,"d":"8.06"},25,"A2"]
["GhCR2_5'LTR","Chr05",51490000,59850000,8.36,15,"A2"]
["GhCR2_5'LTR","Chr06",65530000,72300000,{"v":6.769999999999996,"d":"6.77"},15,"A2"]
["GhCR2_5'LTR","Chr07",29470000,32729999.999999996,{"v":3.259999999999998,"d":"3.26"},303,"A2"]
["GhCR2_5'LTR","Chr08",69850000,77910000,{"v":8.060000000000002,"d":"8.06"},96,"A2"]
["GhCR2_5'LTR","Chr09",30500000,32590000.000000004,{"v":2.0900000000000034,"d":"2.09"},487,"A2"]
["GhCR2_5'LTR","Chr10",70060000,76630000,{"v":6.569999999999993,"d":"6.57"},33,"A2"]
["GhCR2_5'LTR","Chr11",70600000,78750000,{"v":8.150000000000006,"d":"8.15"},307,"A2"]
["GhCR2_5'LTR","Chr12",48780000,55150000,{"v":6.369999999999997,"d":"6.37"},296,"A2"]
["GhCR2_5'LTR","Chr13",50340000,52900000,{"v":2.559999999999995,"d":"2.56"},884,"A2"]
["GhCR3_5'LTR","Chr01",53850000,56300000,{"v":2.4499999999999957,"d":"2.45"},669,"A2"]
["GhCR3_5'LTR","Chr02",59100000,61850000,2.75,834,"A2"]
["GhCR3_5'LTR","Chr03",72420000,78180000,{"v":5.760000000000005,"d":"5.76"},141,"A2"]
["GhCR3_5'LTR","Chr04",61850000,64620000.00000001,{"v":2.770000000000003,"d":"2.77"},247,"A2"]
["GhCR3_5'LTR","Chr05",53750000,55510000,{"v":1.759999999999998,"d":"1.76"},98,"A2"]
["GhCR3_5'LTR","Chr06",67900000,70630000,{"v":2.7299999999999898,"d":"2.73"},578,"A2"]
["GhCR3_5'LTR","Chr07",32830000,35280000,{"v":2.450000000000003,"d":"2.45"},552,"A2"]
["GhCR3_5'LTR","Chr08",75410000,78240000,{"v":2.8299999999999983,"d":"2.83"},658,"A2"]
["GhCR3_5'LTR","Chr09",31900000,33220000,{"v":1.3200000000000003,"d":"1.32"},908,"A2"]
["GhCR3_5'LTR","Chr10",67180000,69150000,{"v":1.9699999999999989,"d":"1.97"},908,"A2"]
["GhCR3_5'LTR","Chr11",74870000,77550000,{"v":2.6799999999999926,"d":"2.68"},482,"A2"]
["GhCR3_5'LTR","Chr12",41040000,44260000,{"v":3.219999999999999,"d":"3.22"},460,"A2"]
["GhCR3_5'LTR","Chr13",55160000,58390000,{"v":3.230000000000004,"d":"3.23"},272,"A2"]
["GhCR4_5'LTR","Chr01",55390000,58030000,{"v":2.6400000000000006,"d":"2.64"},684,"A2"]
["GhCR4_5'LTR","Chr02",61500000,65769999.99999999,{"v":4.269999999999996,"d":"4.27"},509,"A2"]
["GhCR4_5'LTR","Chr03",73220000,79570000,{"v":6.349999999999994,"d":"6.35"},51,"A2"]
["GhCR4_5'LTR","Chr04",60460000,63220000,{"v":2.759999999999998,"d":"2.76"},387,"A2"]
["GhCR4_5'LTR","Chr05",52710000,57140000,4.43,72,"A2"]
["GhCR4_5'LTR","Chr06",70720000,71470000,0.75,15,"A2"]
["GhCR4_5'LTR","Chr07",31550000,33940000,{"v":2.389999999999997,"d":"2.39"},538,"A2"]
["GhCR4_5'LTR","Chr08",72350000,77040000,{"v":4.690000000000012,"d":"4.69"},374,"A2"]
["GhCR4_5'LTR","Chr09",32530000,35320000,{"v":2.789999999999999,"d":"2.79"},281,"A2"]
["GhCR4_5'LTR","Chr10",69440000,72490000,{"v":3.049999999999997,"d":"3.05"},206,"A2"]
["GhCR4_5'LTR","Chr11",79240000,79340000,{"v":0.10000000000000853,"d":"0.10"},9,"A2"]
["GhCR4_5'LTR","Chr12",35546823,35853937,{"v":0.307114,"d":"0.31"},14,"A2"]
["GhCR4_5'LTR","Chr13",53500000,57310000,{"v":3.8100000000000023,"d":"3.81"},278,"A2"]
["GhCR1_5'LTR","Chr01",27470000,29020000,{"v":1.5500000000000007,"d":"1.55"},230,"D5"]
["GhCR1_5'LTR","Chr02",17900000,19310000,{"v":1.4100000000000001,"d":"1.41"},249,"D5"]
["GhCR1_5'LTR","Chr03",27380000,30690000,{"v":3.3100000000000023,"d":"3.31"},79,"D5"]
["GhCR1_5'LTR","Chr04",18490000,29010000,{"v":10.520000000000003,"d":"10.52"},18,"D5"]
["GhCR1_5'LTR","Chr05",35760000,38160000,{"v":2.3999999999999986,"d":"2.40"},121,"D5"]
["GhCR1_5'LTR","Chr06",30080000,32420000,{"v":2.3400000000000034,"d":"2.34"},194,"D5"]
["GhCR1_5'LTR","Chr07",14760000,18480000,{"v":3.7200000000000006,"d":"3.72"},60,"D5"]
["GhCR1_5'LTR","Chr08",27760000,30620000,{"v":2.8599999999999994,"d":"2.86"},231,"D5"]
["GhCR1_5'LTR","Chr09",16820000,18190000,{"v":1.370000000000001,"d":"1.37"},305,"D5"]
["GhCR1_5'LTR","Chr10",31440000,34210000,{"v":2.7699999999999996,"d":"2.77"},167,"D5"]
["GhCR1_5'LTR","Chr11",23510000,26070000,{"v":2.5599999999999987,"d":"2.56"},92,"D5"]
["GhCR1_5'LTR","Chr12",23810000,26750000,{"v":2.9400000000000013,"d":"2.94"},82,"D5"]
["GhCR1_5'LTR","Chr13",24670000,27510000,2.84,86,"D5"]
["GhCR2_5'LTR","Chr01",25790000,29270000,{"v":3.4800000000000004,"d":"3.48"},74,"D5"]
["GhCR2_5'LTR","Chr02",17710000,19100000,{"v":1.3900000000000006,"d":"1.39"},309,"D5"]
["GhCR2_5'LTR","Chr03",28740000,31910000,{"v":3.1700000000000017,"d":"3.17"},26,"D5"]
["GhCR2_5'LTR","Chr04","NA","NA",{"v":0,"d":"0.00"},0,"D5"]
["GhCR2_5'LTR","Chr05",37770000,38460000,{"v":0.6899999999999977,"d":"0.69"},5,"D5"]
["GhCR2_5'LTR","Chr06",32830000,36180000,{"v":3.3500000000000014,"d":"3.35"},4,"D5"]
["GhCR2_5'LTR","Chr07",16920000,18860000,{"v":1.9399999999999977,"d":"1.94"},101,"D5"]
["GhCR2_5'LTR","Chr08",21770000,37420000,{"v":15.650000000000002,"d":"15.65"},12,"D5"]
["GhCR2_5'LTR","Chr09",15410000,17140000,{"v":1.7300000000000004,"d":"1.73"},150,"D5"]
["GhCR2_5'LTR","Chr10",30410000,43450000,{"v":13.040000000000003,"d":"13.04"},9,"D5"]
["GhCR2_5'LTR","Chr11",21140000,27950000,{"v":6.809999999999999,"d":"6.81"},35,"D5"]
["GhCR2_5'LTR","Chr12",26410000,29750000,3.34,113,"D5"]
["GhCR2_5'LTR","Chr13",20150000,21870000,{"v":1.7200000000000024,"d":"1.72"},410,"D5"]
["GhCR3_5'LTR","Chr01",26610000,28720000,{"v":2.1099999999999994,"d":"2.11"},152,"D5"]
["GhCR3_5'LTR","Chr02",17410000,18700000,{"v":1.2899999999999991,"d":"1.29"},346,"D5"]
["GhCR3_5'LTR","Chr03",25430000,30620000,{"v":5.190000000000001,"d":"5.19"},42,"D5"]
["GhCR3_5'LTR","Chr04",20640000,29810000,{"v":9.169999999999998,"d":"9.17"},21,"D5"]
["GhCR3_5'LTR","Chr05",37490000,40520000,{"v":3.030000000000001,"d":"3.03"},30,"D5"]
["GhCR3_5'LTR","Chr06",29570000,31990000,{"v":2.419999999999998,"d":"2.42"},189,"D5"]
["GhCR3_5'LTR","Chr07",16000000,18950000,{"v":2.9499999999999993,"d":"2.95"},98,"D5"]
["GhCR3_5'LTR","Chr08",28220000,30870000,{"v":2.650000000000002,"d":"2.65"},235,"D5"]
["GhCR3_5'LTR","Chr09",16710000,18120000,{"v":1.4100000000000001,"d":"1.41"},322,"D5"]
["GhCR3_5'LTR","Chr10",31680000,33500000,{"v":1.8200000000000003,"d":"1.82"},303,"D5"]
["GhCR3_5'LTR","Chr11",23810000,27000000,{"v":3.1900000000000013,"d":"3.19"},98,"D5"]
["GhCR3_5'LTR","Chr12",24700000,26950000,2.25,166,"D5"]
["GhCR3_5'LTR","Chr13",24590000,27420000,{"v":2.830000000000002,"d":"2.83"},86,"D5"]
["GhCR4_5'LTR","Chr01",27390000,29010000,{"v":1.620000000000001,"d":"1.62"},202,"D5"]
["GhCR4_5'LTR","Chr02",18010000,20430000,{"v":2.419999999999998,"d":"2.42"},117,"D5"]
["GhCR4_5'LTR","Chr03",28340000,31790000,{"v":3.4499999999999993,"d":"3.45"},25,"D5"]
["GhCR4_5'LTR","Chr04",24610000,29120000,{"v":4.510000000000002,"d":"4.51"},50,"D5"]
["GhCR4_5'LTR","Chr05",35630000,39610000,{"v":3.979999999999997,"d":"3.98"},23,"D5"]
["GhCR4_5'LTR","Chr06",32619999.999999996,33369999.999999996,0.75,3,"D5"]
["GhCR4_5'LTR","Chr07",16930000,19840000,2.91,113,"D5"]
["GhCR4_5'LTR","Chr08",28330000,32740000.000000004,{"v":4.410000000000004,"d":"4.41"},96,"D5"]
["GhCR4_5'LTR","Chr09",15880000,20130000,{"v":4.249999999999998,"d":"4.25"},43,"D5"]
["GhCR4_5'LTR","Chr10",32000000,36550000,{"v":4.549999999999997,"d":"4.55"},28,"D5"]
["GhCR4_5'LTR","Chr11",22910000,24910000,{"v":2,"d":"2.00"},5,"D5"]
["GhCR4_5'LTR","Chr12",18710000,27230000,8.52,5,"D5"]
["GhCR4_5'LTR","Chr13",21900000,26670000,{"v":4.770000000000003,"d":"4.77"},68,"D5"]

{"sheet":"Table S9","index":8,"n_rows":24,"n_cols":10,"rows_kept":24,"merged":[[1,0,2,0],[1,1,1,3],[1,4,1,6],[1,7,1,9]]}
["Supplementary Table 9. Repeat sequences annotation in three reference genomes."]
["Type","K2 genome",null,null,"A2 genome",null,null,"D5 genome"]
[null,"Number","Length","Rate(%)","Number","Length","Rate(%)","Number","Length","Rate(%)"]
["ClassI",{"v":1845882,"d":"1,845,882"},{"v":1761554701,"d":"1,761,554,701"},72.07,{"v":752140,"d":"752,140"},{"v":1029708843,"d":"1,029,708,843"},63.52,{"v":512855,"d":"512,855"},{"v":366459241,"d":"366,459,241"},48.85]
["ClassI/DIRS",{"v":208170,"d":"208,170"},{"v":265530812,"d":"265,530,812"},10.86,{"v":46428,"d":"46,428"},{"v":57247181,"d":"57,247,181"},3.53,{"v":22454,"d":"22,454"},{"v":17681989,"d":"17,681,989"},2.36]
["ClassI/LINE",{"v":46566,"d":"46,566"},{"v":26567549,"d":"26,567,549"},1.09,{"v":22563,"d":"22,563"},{"v":11144887,"d":"11,144,887"},0.69,{"v":16961,"d":"16,961"},{"v":8435095,"d":"8,435,095"},1.12]
["ClassI/LTR",{"v":6452,"d":"6,452"},{"v":5275700,"d":"5,275,700"},0.22,{"v":2221,"d":"2,221"},{"v":1215167,"d":"1,215,167"},0.07,{"v":2845,"d":"2,845"},{"v":2134346,"d":"2,134,346"},0.28]
["ClassI/LTR/Copia",{"v":165283,"d":"165,283"},{"v":100180549,"d":"100,180,549"},4.1,{"v":99093,"d":"99,093"},{"v":70986298,"d":"70,986,298"},4.38,{"v":100198,"d":"100,198"},{"v":65618612,"d":"65,618,612"},8.75]
["ClassI/LTR/Gypsy",{"v":1027298,"d":"1,027,298"},{"v":1362306179,"d":"1,362,306,179"},55.73,{"v":433728,"d":"433,728"},{"v":811948973,"d":"811,948,973"},50.09,{"v":227963,"d":"227,963"},{"v":222846536,"d":"222,846,536"},29.71]
["ClassI/PLE|LARD",{"v":385545,"d":"385,545"},{"v":228535802,"d":"228,535,802"},9.35,{"v":145044,"d":"145,044"},{"v":76370438,"d":"76,370,438"},4.71,{"v":138508,"d":"138,508"},{"v":48017665,"d":"48,017,665"},6.4]
["ClassI/SINE",{"v":3732,"d":"3,732"},{"v":766796,"d":"766,796"},0.03,{"v":2184,"d":"2,184"},{"v":338174,"d":"338,174"},0.02,{"v":2451,"d":"2,451"},{"v":630576,"d":"630,576"},0.08]
["ClassI/TRIM",{"v":1998,"d":"1,998"},{"v":1785372,"d":"1,785,372"},0.07,541,{"v":341001,"d":"341,001"},0.02,{"v":1274,"d":"1,274"},{"v":1055822,"d":"1,055,822"},0.14]
["ClassI/Unknown",838,{"v":182588,"d":"182,588"},0.01,338,{"v":117154,"d":"117,154"},0.01,201,{"v":38600,"d":"38,600"},0.01]
["ClassII",{"v":130719,"d":"130,719"},{"v":92953540,"d":"92,953,540"},3.8,{"v":62789,"d":"62,789"},{"v":29322186,"d":"29,322,186"},1.81,{"v":47602,"d":"47,602"},{"v":23435323,"d":"23,435,323"},3.12]
["ClassII/Crypton",13,674,0,420,{"v":124155,"d":"124,155"},0.01,118,{"v":57091,"d":"57,091"},0.01]
["ClassII/Helitron",{"v":22574,"d":"22,574"},{"v":7174610,"d":"7,174,610"},0.29,{"v":25250,"d":"25,250"},{"v":7095364,"d":"7,095,364"},0.44,{"v":16086,"d":"16,086"},{"v":4588753,"d":"4,588,753"},0.61]
["ClassII/MITE",{"v":1957,"d":"1,957"},{"v":449779,"d":"449,779"},0.02,{"v":5815,"d":"5,815"},{"v":1761091,"d":"1,761,091"},0.11,855,{"v":199121,"d":"199,121"},0.03]
["ClassII/Maverick",{"v":2691,"d":"2,691"},{"v":1488785,"d":"1,488,785"},0.06,73,{"v":154323,"d":"154,323"},0.01,{"v":1180,"d":"1,180"},{"v":229788,"d":"229,788"},0.03]
["ClassII/TIR",{"v":100218,"d":"100,218"},{"v":83735745,"d":"83,735,745"},3.43,{"v":28888,"d":"28,888"},{"v":19553358,"d":"19,553,358"},1.21,{"v":27621,"d":"27,621"},{"v":17919321,"d":"17,919,321"},2.39]
["ClassII/Unknown",{"v":3266,"d":"3,266"},{"v":820869,"d":"820,869"},0.03,{"v":2343,"d":"2,343"},{"v":633895,"d":"633,895"},0.04,{"v":1742,"d":"1,742"},{"v":441249,"d":"441,249"},0.06]
["PotentialHostGene",{"v":19687,"d":"19,687"},{"v":6541636,"d":"6,541,636"},0.27,{"v":19757,"d":"19,757"},{"v":5904949,"d":"5,904,949"},0.36,{"v":15206,"d":"15,206"},{"v":4020009,"d":"4,020,009"},0.54]
["SSR",{"v":6430,"d":"6,430"},{"v":1747735,"d":"1,747,735"},0.07,{"v":2806,"d":"2,806"},{"v":440265,"d":"440,265"},0.03,{"v":3592,"d":"3,592"},{"v":661886,"d":"661,886"},0.09]
["Unknown",{"v":256679,"d":"256,679"},{"v":115239255,"d":"115,239,255"},4.71,{"v":102305,"d":"102,305"},{"v":37689258,"d":"37,689,258"},2.33,{"v":103296,"d":"103,296"},{"v":33335459,"d":"33,335,459"},4.44]
["Total",{"v":2002718,"d":"2,002,718"},{"v":1978036867,"d":"1,978,036,867"},80.92,{"v":837492,"d":"837,492"},{"v":1103057320,"d":"1,103,057,320"},68.05,{"v":579255,"d":"579,255"},{"v":427911877,"d":"427,911,877"},57.04]

{"sheet":"Table S10","index":9,"n_rows":766,"n_cols":4,"rows_kept":766}
["Supplementary Table 10. Summary of A/B compartment switching genes in K2 versus A2 genome."]
["K2","Status","A2","Status"]
["Grot_01G019560","A","Garb_01G019330","B"]
["Grot_01G019800","A","Garb_01G019580","B"]
["Grot_01G022060","B","Garb_01G021690","A"]
["Grot_01G022150","B","Garb_01G021720","A"]
["Grot_01G022600","B","Garb_01G022140","A"]
["Grot_01G022940","B","Garb_01G022420","A"]
["Grot_01G022980","B","Garb_01G022520","A"]
["Grot_01G017290","A","Garb_01G017760","B"]
["Grot_01G017350","A","Garb_01G017780","B"]
["Grot_01G017370","A","Garb_01G017810","B"]
["Grot_01G015570","A","Garb_01G014430","B"]
["Grot_01G013020","A","Garb_01G016620","B"]
["Grot_01G016420","B","Garb_01G015580","A"]
["Grot_01G016310","A","Garb_01G015770","B"]
["Grot_01G011880","B","Garb_01G015900","A"]
["Grot_01G012480","A","Garb_01G012710","B"]
["Grot_01G012170","A","Garb_01G013360","B"]
["Grot_01G016240","B","Garb_01G014000","A"]
["Grot_02G006990","A","Garb_01G006930","B"]
["Grot_02G007580","A","Garb_01G007600","B"]
["Grot_02G007730","B","Garb_01G007720","A"]
["Grot_02G010770","B","Garb_01G011020","A"]
["Grot_02G011210","A","Garb_01G011470","B"]
["Grot_02G009970","A","Garb_01G010190","B"]
["Grot_02G009980","A","Garb_01G010200","B"]
["Grot_02G008910","A","Garb_01G009550","B"]
["Grot_02G008900","A","Garb_01G009600","B"]
["Grot_02G010290","A","Garb_01G010910","B"]
["Grot_02G009930","A","Garb_01G009740","B"]
["Grot_01G008990","B","Garb_02G014520","A"]
["Grot_01G009070","B","Garb_02G014570","A"]
["Grot_01G009090","A","Garb_02G013270","B"]
["Grot_01G009270","A","Garb_02G013490","B"]
["Grot_01G009280","A","Garb_02G013500","B"]
["Grot_01G007210","B","Garb_02G012750","A"]
["Grot_01G007220","B","Garb_02G012760","A"]
["Grot_01G007590","B","Garb_02G013080","A"]
["Grot_01G007020","B","Garb_02G010490","A"]
["Grot_01G006990","B","Garb_02G010500","A"]
["Grot_01G006680","B","Garb_02G010830","A"]
["Grot_01G006670","B","Garb_02G010840","A"]
["Grot_01G006570","B","Garb_02G010940","A"]
["Grot_01G007990","A","Garb_02G011580","B"]
["Grot_01G007870","B","Garb_02G011750","A"]
["Grot_01G007860","B","Garb_02G011760","A"]
["Grot_02G014070","B","Garb_02G007460","A"]
["Grot_02G014350","B","Garb_02G007800","A"]
["Grot_02G014380","B","Garb_02G007820","A"]
["Grot_02G014510","B","Garb_02G007950","A"]
["Grot_02G014670","B","Garb_02G008100","A"]
["Grot_02G014680","B","Garb_02G008110","A"]
["Grot_02G012690","A","Garb_02G009740","B"]
["Grot_02G012860","B","Garb_02G009900","A"]
["Grot_02G013060","B","Garb_02G010220","A"]
["Grot_02G013070","B","Garb_02G010230","A"]
["Grot_02G013080","B","Garb_02G010240","A"]
["Grot_02G016560","B","Garb_02G004620","A"]
["Grot_02G016500","B","Garb_02G004680","A"]
["Grot_02G015390","B","Garb_02G006020","A"]
["Grot_02G015340","B","Garb_02G006080","A"]
["Grot_02G015290","B","Garb_02G006300","A"]
["Grot_02G014980","B","Garb_02G006580","A"]
["Grot_02G012160","B","Garb_02G009070","A"]
["Grot_02G013380","B","Garb_02G009530","A"]
["Grot_02G013270","A","Garb_02G009630","B"]
["Grot_03G008020","B","Garb_03G008300","A"]
["Grot_03G008110","B","Garb_03G008330","A"]
["Grot_03G008640","A","Garb_03G008880","B"]
["Grot_03G010100","B","Garb_03G010500","A"]
["Grot_03G010110","B","Garb_03G010510","A"]
["Grot_03G010920","A","Garb_03G011180","B"]
["Grot_03G010930","A","Garb_03G011200","B"]
["Grot_03G022470","B","Garb_03G021990","A"]
["Grot_03G012120","A","Garb_03G011860","B"]
["Grot_03G012560","B","Garb_03G012140","A"]
["Grot_03G012790","A","Garb_03G012330","B"]
["Grot_03G013200","B","Garb_03G012690","A"]
["Grot_03G014850","A","Garb_03G014200","B"]
["Grot_03G021320","B","Garb_03G020490","A"]
["Grot_03G020230","A","Garb_03G014950","B"]
["Grot_03G020270","A","Garb_03G019030","B"]
["Grot_03G016240","A","Garb_03G016710","B"]
["Grot_03G016330","B","Garb_03G016800","A"]
["Grot_03G016430","A","Garb_03G016940","B"]
["Grot_03G016460","A","Garb_03G016960","B"]
["Grot_03G016530","A","Garb_03G017010","B"]
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["Grot_13G017800","A","Garb_13G013160","B"]
["Grot_13G017540","A","Garb_13G013230","B"]
["Grot_13G017490","A","Garb_13G013410","B"]
["Grot_13G017480","A","Garb_13G013430","B"]
["Grot_13G016450","B","Garb_13G013350","A"]
["Grot_13G016160","B","Garb_13G013550","A"]
["Grot_13G017390","A","Garb_13G010980","B"]

{"sheet":"Table S11","index":10,"n_rows":3845,"n_cols":4,"rows_kept":3845}
["Supplementary Table 11. Summary of A/B compartment switching genes in K2 versus D5 genome."]
["K2","Status","D5","Status"]
["Grot_01G022980","B","Grai_01G007420","A"]
["Grot_01G022940","B","Grai_01G007490","A"]
["Grot_01G022870","A","Grai_01G007530","B"]
["Grot_01G022860","A","Grai_01G007540","B"]
["Grot_01G022850","A","Grai_01G007550","B"]
["Grot_01G022730","A","Grai_01G007570","B"]
["Grot_01G022710","A","Grai_01G007610","B"]
["Grot_01G022610","A","Grai_01G007670","B"]
["Grot_01G019890","A","Grai_01G010160","B"]
["Grot_01G019850","A","Grai_01G010180","B"]
["Grot_01G019840","A","Grai_01G010190","B"]
["Grot_01G019820","A","Grai_01G010210","B"]
["Grot_01G019800","A","Grai_01G010220","B"]
["Grot_01G019780","A","Grai_01G010230","B"]
["Grot_01G019770","A","Grai_01G010240","B"]
["Grot_01G019710","A","Grai_01G010300","B"]
["Grot_01G019700","A","Grai_01G010310","B"]
["Grot_01G019690","A","Grai_01G010320","B"]
["Grot_01G019670","A","Grai_01G010350","B"]
["Grot_01G019660","A","Grai_01G010360","B"]
["Grot_01G017630","A","Grai_01G012420","B"]
["Grot_01G017540","A","Grai_01G012520","B"]
["Grot_01G017530","A","Grai_01G012530","B"]
["Grot_01G017390","A","Grai_01G012600","B"]
["Grot_01G017350","A","Grai_01G012650","B"]
["Grot_01G017290","A","Grai_01G012680","B"]
["Grot_01G017250","A","Grai_01G012690","B"]
["Grot_01G017240","A","Grai_01G012700","B"]
["Grot_01G017050","A","Grai_01G012940","B"]
["Grot_01G017040","A","Grai_01G012950","B"]
["Grot_01G017030","A","Grai_01G012960","B"]
["Grot_01G012830","A","Grai_01G012970","B"]
["Grot_01G012860","A","Grai_01G013000","B"]
["Grot_01G012890","A","Grai_01G013040","B"]
["Grot_01G013020","A","Grai_01G013170","B"]
["Grot_01G013040","A","Grai_01G013180","B"]
["Grot_01G013060","A","Grai_01G013210","B"]
["Grot_01G013080","A","Grai_01G013220","B"]
["Grot_01G013270","A","Grai_01G013250","B"]
["Grot_01G013340","A","Grai_01G013260","B"]
["Grot_01G013350","A","Grai_01G013270","B"]
["Grot_01G013390","A","Grai_01G013300","B"]
["Grot_01G013430","A","Grai_01G013310","B"]
["Grot_01G013440","A","Grai_01G013320","B"]
["Grot_01G013450","A","Grai_01G013330","B"]
["Grot_01G013470","A","Grai_01G013350","B"]
["Grot_01G013590","A","Grai_01G013380","B"]
["Grot_01G013600","A","Grai_01G013390","B"]
["Grot_01G013630","A","Grai_01G013400","B"]
["Grot_01G013650","A","Grai_01G013410","B"]
["Grot_01G013680","A","Grai_01G013420","B"]
["Grot_01G013710","A","Grai_01G013430","B"]
["Grot_01G013750","A","Grai_01G013450","B"]
["Grot_01G013770","A","Grai_01G013460","B"]
["Grot_01G013780","A","Grai_01G013470","B"]
["Grot_01G013800","A","Grai_01G013490","B"]
["Grot_01G013820","A","Grai_01G013500","B"]
["Grot_01G013830","A","Grai_01G013520","B"]
["Grot_01G013920","A","Grai_01G013600","B"]
["Grot_01G014040","A","Grai_01G013640","B"]
["Grot_01G014130","A","Grai_01G013710","B"]
["Grot_01G014170","A","Grai_01G013720","B"]
["Grot_01G014210","A","Grai_01G013740","B"]
["Grot_01G014280","A","Grai_01G013780","B"]
["Grot_01G014350","A","Grai_01G013800","B"]
["Grot_01G014390","A","Grai_01G013820","B"]
["Grot_01G014400","A","Grai_01G013830","B"]
["Grot_01G014470","A","Grai_01G013840","B"]
["Grot_01G015220","A","Grai_01G013910","B"]
["Grot_01G015210","A","Grai_01G013930","B"]
["Grot_01G015180","A","Grai_01G013950","B"]
["Grot_01G015170","A","Grai_01G013960","B"]
["Grot_01G015110","A","Grai_01G013980","B"]
["Grot_01G015100","A","Grai_01G013990","B"]
["Grot_01G014910","A","Grai_01G014010","B"]
["Grot_01G014940","A","Grai_01G014020","B"]
["Grot_01G014950","A","Grai_01G014060","B"]
["Grot_01G014960","A","Grai_01G014070","B"]
["Grot_01G015680","A","Grai_01G014170","B"]
["Grot_01G015660","A","Grai_01G014190","B"]
["Grot_01G015590","A","Grai_01G014220","B"]
["Grot_01G015580","A","Grai_01G014230","B"]
["Grot_01G015570","A","Grai_01G014240","B"]
["Grot_01G015560","A","Grai_01G014250","B"]
["Grot_01G015550","A","Grai_01G014260","B"]
["Grot_01G015540","A","Grai_01G014270","B"]
["Grot_01G015480","A","Grai_01G014300","B"]
["Grot_01G016360","A","Grai_01G014410","B"]
["Grot_01G016340","A","Grai_01G014450","B"]
["Grot_01G016330","A","Grai_01G014470","B"]
["Grot_01G016170","A","Grai_01G014480","B"]
["Grot_01G016180","A","Grai_01G014490","B"]
["Grot_01G016190","A","Grai_01G014510","B"]
["Grot_01G016200","A","Grai_01G014520","B"]
["Grot_01G016220","A","Grai_01G014530","B"]
["Grot_01G016210","A","Grai_01G014540","B"]
["Grot_01G015960","A","Grai_01G014600","B"]
["Grot_01G015950","A","Grai_01G014640","B"]
["Grot_01G015930","A","Grai_01G014690","B"]
["Grot_01G015910","A","Grai_01G014700","B"]
["Grot_01G015880","A","Grai_01G014710","B"]
["Grot_01G015870","A","Grai_01G014720","B"]
["Grot_01G015820","A","Grai_01G014750","B"]
["Grot_01G015780","A","Grai_01G014770","B"]
["Grot_01G015770","A","Grai_01G014790","B"]
["Grot_01G015760","A","Grai_01G014800","B"]
["Grot_01G012160","A","Grai_01G015020","B"]
["Grot_01G012180","A","Grai_01G015110","B"]
["Grot_01G012190","A","Grai_01G015120","B"]
["Grot_01G012220","A","Grai_01G015140","B"]
["Grot_01G012240","A","Grai_01G015150","B"]
["Grot_01G012270","A","Grai_01G015180","B"]
["Grot_01G012280","A","Grai_01G015190","B"]
["Grot_01G012300","A","Grai_01G015200","B"]
["Grot_01G012340","A","Grai_01G015210","B"]
["Grot_01G012350","A","Grai_01G015230","B"]
["Grot_01G012360","A","Grai_01G015240","B"]
["Grot_01G012370","A","Grai_01G015250","B"]
["Grot_01G012380","A","Grai_01G015260","B"]
["Grot_01G012400","A","Grai_01G015270","B"]
["Grot_01G012440","A","Grai_01G015300","B"]
["Grot_01G012450","A","Grai_01G015320","B"]
["Grot_01G012480","A","Grai_01G015370","B"]
["Grot_01G012600","A","Grai_01G015580","B"]
["Grot_01G012610","A","Grai_01G015610","B"]
["Grot_01G012620","A","Grai_01G015620","B"]
["Grot_01G012640","A","Grai_01G015630","B"]
["Grot_01G012740","A","Grai_01G015720","B"]
["Grot_01G012750","A","Grai_01G015740","B"]
["Grot_01G011280","A","Grai_01G015840","B"]
["Grot_01G011240","A","Grai_01G015880","B"]
["Grot_01G011190","A","Grai_01G015900","B"]
["Grot_01G011170","A","Grai_01G015920","B"]
["Grot_01G011160","A","Grai_01G015930","B"]
["Grot_01G011150","A","Grai_01G015940","B"]
["Grot_01G011140","A","Grai_01G015950","B"]
["Grot_01G010950","A","Grai_01G016080","B"]
["Grot_01G010940","A","Grai_01G016110","B"]
["Grot_01G010840","A","Grai_01G016170","B"]
["Grot_01G010820","A","Grai_01G016180","B"]
["Grot_01G010810","A","Grai_01G016200","B"]
["Grot_01G010800","A","Grai_01G016210","B"]
["Grot_01G010270","B","Grai_01G016300","A"]
["Grot_01G010290","B","Grai_01G016310","A"]
["Grot_01G010340","A","Grai_01G016450","B"]
["Grot_01G010360","A","Grai_01G016470","B"]
["Grot_01G010390","A","Grai_01G016480","B"]
["Grot_01G010400","A","Grai_01G016490","B"]
["Grot_01G010430","A","Grai_01G016520","B"]
["Grot_01G010530","A","Grai_01G016590","B"]
["Grot_01G010670","A","Grai_01G016780","B"]
["Grot_01G010700","A","Grai_01G016800","B"]
["Grot_01G010770","A","Grai_01G016820","B"]
["Grot_01G007880","A","Grai_01G016860","B"]
["Grot_01G007990","A","Grai_01G016960","B"]
["Grot_01G008040","A","Grai_01G017020","B"]
["Grot_01G008060","A","Grai_01G017030","B"]
["Grot_01G008070","A","Grai_01G017040","B"]
["Grot_01G008080","A","Grai_01G017050","B"]
["Grot_01G008120","A","Grai_01G017070","B"]
["Grot_01G008160","A","Grai_01G017110","B"]
["Grot_01G008270","A","Grai_01G017220","B"]
["Grot_01G010130","A","Grai_01G017500","B"]
["Grot_01G010140","A","Grai_01G017510","B"]
["Grot_01G010180","A","Grai_01G017580","B"]
["Grot_01G007760","A","Grai_01G017650","B"]
["Grot_01G007750","A","Grai_01G017660","B"]
["Grot_01G007740","A","Grai_01G017670","B"]
["Grot_01G007720","A","Grai_01G017710","B"]
["Grot_01G007710","A","Grai_01G017720","B"]
["Grot_01G007680","A","Grai_01G017730","B"]
["Grot_01G007600","A","Grai_01G017790","B"]
["Grot_01G007520","A","Grai_01G017820","B"]
["Grot_01G007510","A","Grai_01G017830","B"]
["Grot_01G007500","A","Grai_01G017840","B"]
["Grot_01G007480","A","Grai_01G017860","B"]
["Grot_01G007470","A","Grai_01G017870","B"]
["Grot_01G007460","A","Grai_01G017900","B"]
["Grot_01G007450","A","Grai_01G017910","B"]
["Grot_01G007440","A","Grai_01G017930","B"]
["Grot_01G007430","A","Grai_01G017940","B"]
["Grot_01G007420","A","Grai_01G017950","B"]
["Grot_01G007410","A","Grai_01G017980","B"]
["Grot_01G007400","A","Grai_01G017990","B"]
["Grot_01G007390","A","Grai_01G018000","B"]
["Grot_01G007370","A","Grai_01G018020","B"]
["Grot_01G007360","A","Grai_01G018030","B"]
["Grot_01G007340","A","Grai_01G018040","B"]
["Grot_01G007320","A","Grai_01G018050","B"]
["Grot_01G007310","A","Grai_01G018060","B"]
["Grot_01G007280","A","Grai_01G018080","B"]
["Grot_01G007270","A","Grai_01G018090","B"]
["Grot_01G007260","A","Grai_01G018100","B"]
["Grot_01G007250","A","Grai_01G018110","B"]
["Grot_01G007230","A","Grai_01G018120","B"]
["Grot_01G007190","A","Grai_01G018200","B"]
["Grot_01G007140","A","Grai_01G018230","B"]
["Grot_01G007110","A","Grai_01G018250","B"]
["Grot_01G007100","A","Grai_01G018260","B"]
["Grot_01G007090","A","Grai_01G018270","B"]
["Grot_01G007080","A","Grai_01G018290","B"]
["Grot_01G007070","A","Grai_01G018300","B"]
["Grot_01G007050","A","Grai_01G018310","B"]
["Grot_01G007040","A","Grai_01G018320","B"]
["Grot_01G006950","A","Grai_01G018350","B"]
["Grot_01G006940","A","Grai_01G018360","B"]
["Grot_01G006930","A","Grai_01G018370","B"]
["Grot_01G006900","A","Grai_01G018390","B"]
["Grot_01G006880","A","Grai_01G018400","B"]
["Grot_01G006870","A","Grai_01G018420","B"]
["Grot_01G006830","A","Grai_01G018450","B"]
["Grot_01G006820","A","Grai_01G018480","B"]
["Grot_01G006800","A","Grai_01G018510","B"]
["Grot_01G006760","A","Grai_01G018540","B"]
["Grot_01G006740","A","Grai_01G018550","B"]
["Grot_01G006730","A","Grai_01G018560","B"]
["Grot_01G006720","A","Grai_01G018600","B"]
["Grot_01G006710","A","Grai_01G018610","B"]
["Grot_01G006650","A","Grai_01G018640","B"]
["Grot_01G006640","A","Grai_01G018650","B"]
["Grot_01G006610","A","Grai_01G018670","B"]
["Grot_01G006600","A","Grai_01G018680","B"]
["Grot_01G006590","A","Grai_01G018700","B"]
["Grot_01G006580","A","Grai_01G018710","B"]
["Grot_01G009010","A","Grai_01G018740","B"]
["Grot_01G009060","A","Grai_01G018770","B"]
["Grot_01G009090","A","Grai_01G018790","B"]
["Grot_01G009100","A","Grai_01G018800","B"]
["Grot_01G009120","A","Grai_01G018810","B"]
["Grot_01G009130","A","Grai_01G018820","B"]
["Grot_01G009140","A","Grai_01G018830","B"]
["Grot_01G009160","A","Grai_01G018840","B"]
["Grot_01G009170","A","Grai_01G018850","B"]
["Grot_01G009230","A","Grai_01G018930","B"]
["Grot_01G009240","A","Grai_01G018950","B"]
["Grot_01G009250","A","Grai_01G018960","B"]
["Grot_01G009270","A","Grai_01G018990","B"]
["Grot_01G009280","A","Grai_01G019000","B"]
["Grot_01G009430","A","Grai_01G019090","B"]
["Grot_01G009510","A","Grai_01G019120","B"]
["Grot_01G009530","A","Grai_01G019130","B"]
["Grot_01G009540","A","Grai_01G019140","B"]
["Grot_01G009550","A","Grai_01G019150","B"]
["Grot_01G009560","A","Grai_01G019160","B"]
["Grot_01G009570","A","Grai_01G019170","B"]
["Grot_01G009600","A","Grai_01G019180","B"]
["Grot_01G009620","A","Grai_01G019190","B"]
["Grot_01G009640","A","Grai_01G019210","B"]
["Grot_01G009680","A","Grai_01G019250","B"]
["Grot_01G009690","A","Grai_01G019260","B"]
["Grot_01G009700","A","Grai_01G019270","B"]
["Grot_01G009740","A","Grai_01G019290","B"]
["Grot_01G009760","A","Grai_01G019320","B"]
["Grot_01G009770","A","Grai_01G019330","B"]
["Grot_01G009780","A","Grai_01G019340","B"]
["Grot_01G008310","A","Grai_01G019380","B"]
["Grot_01G008360","A","Grai_01G019400","B"]
["Grot_01G008480","A","Grai_01G019510","B"]
["Grot_01G008660","A","Grai_01G019660","B"]
["Grot_01G008670","A","Grai_01G019670","B"]
["Grot_01G008760","A","Grai_01G019750","B"]
["Grot_01G008840","A","Grai_01G019810","B"]
["Grot_01G008850","A","Grai_01G019820","B"]
["Grot_01G008870","A","Grai_01G019850","B"]
["Grot_01G008920","A","Grai_01G019890","B"]
["Grot_01G008930","A","Grai_01G019900","B"]
["Grot_01G008940","A","Grai_01G019910","B"]
["Grot_01G008960","A","Grai_01G019920","B"]
["Grot_01G006560","A","Grai_01G020080","B"]
["Grot_01G006550","A","Grai_01G020090","B"]
["Grot_01G006540","A","Grai_01G020100","B"]
["Grot_01G006530","A","Grai_01G020110","B"]
["Grot_01G006520","A","Grai_01G020130","B"]
["Grot_01G006500","A","Grai_01G020140","B"]
["Grot_01G006490","A","Grai_01G020150","B"]
["Grot_01G006470","A","Grai_01G020170","B"]
["Grot_01G006460","A","Grai_01G020180","B"]
["Grot_01G006450","A","Grai_01G020190","B"]
["Grot_01G005650","A","Grai_01G020900","B"]
["Grot_01G005070","A","Grai_01G021480","B"]
["Grot_01G005030","A","Grai_01G021490","B"]
["Grot_01G005020","A","Grai_01G021510","B"]
["Grot_01G004860","A","Grai_01G021630","B"]
["Grot_01G004020","A","Grai_01G022430","B"]
["Grot_02G018690","A","Grai_02G002480","B"]
["Grot_02G016640","A","Grai_02G004480","B"]
["Grot_02G016630","A","Grai_02G004560","B"]
["Grot_02G016620","A","Grai_02G004570","B"]
["Grot_02G016570","A","Grai_02G004610","B"]
["Grot_02G016540","A","Grai_02G004640","B"]
["Grot_02G016500","B","Grai_02G004690","A"]
["Grot_02G016120","A","Grai_02G005480","B"]
["Grot_02G016110","A","Grai_02G005490","B"]
["Grot_02G016100","A","Grai_02G005500","B"]
["Grot_02G016090","A","Grai_02G005510","B"]
["Grot_02G016070","A","Grai_02G005520","B"]
["Grot_02G016050","A","Grai_02G005530","B"]
["Grot_02G016030","A","Grai_02G005550","B"]
["Grot_02G016020","A","Grai_02G005560","B"]
["Grot_02G016010","A","Grai_02G005590","B"]
["Grot_02G016000","A","Grai_02G005600","B"]
["Grot_02G015990","A","Grai_02G005630","B"]
["Grot_02G015970","A","Grai_02G005650","B"]
["Grot_02G015950","A","Grai_02G005660","B"]
["Grot_02G015940","A","Grai_02G005670","B"]
["Grot_02G015920","A","Grai_02G005680","B"]
["Grot_02G015910","A","Grai_02G005690","B"]
["Grot_02G015880","A","Grai_02G005730","B"]
["Grot_02G015870","A","Grai_02G005740","B"]
["Grot_02G015850","A","Grai_02G005760","B"]
["Grot_02G015540","A","Grai_02G005910","B"]
["Grot_02G015480","A","Grai_02G005960","B"]
["Grot_02G015470","A","Grai_02G005970","B"]
["Grot_02G015460","A","Grai_02G005980","B"]
["Grot_02G015150","A","Grai_02G006330","B"]
["Grot_02G015140","A","Grai_02G006340","B"]
["Grot_02G015130","A","Grai_02G006350","B"]
["Grot_02G015100","A","Grai_02G006360","B"]
["Grot_02G015080","A","Grai_02G006380","B"]
["Grot_02G015020","A","Grai_02G006400","B"]
["Grot_02G014990","A","Grai_02G006430","B"]
["Grot_02G014980","B","Grai_02G006450","A"]
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["Grot_13G020270","A","Grai_13G009130","B"]
["Grot_13G020200","A","Grai_13G009190","B"]
["Grot_13G020130","A","Grai_13G009210","B"]
["Grot_13G020060","A","Grai_13G009300","B"]
["Grot_13G019940","A","Grai_13G009520","B"]
["Grot_13G019930","A","Grai_13G009530","B"]
["Grot_13G019910","A","Grai_13G009560","B"]
["Grot_13G019900","A","Grai_13G009570","B"]
["Grot_13G019890","A","Grai_13G009580","B"]
["Grot_13G019860","A","Grai_13G009600","B"]
["Grot_13G019820","A","Grai_13G009630","B"]
["Grot_13G019810","A","Grai_13G009680","B"]
["Grot_13G019370","A","Grai_13G010100","B"]
["Grot_13G019170","B","Grai_13G010300","A"]
["Grot_13G019130","A","Grai_13G010320","B"]
["Grot_13G019120","A","Grai_13G010330","B"]
["Grot_13G019110","A","Grai_13G010340","B"]
["Grot_13G019100","A","Grai_13G010350","B"]
["Grot_13G019080","A","Grai_13G010390","B"]
["Grot_13G019060","A","Grai_13G010400","B"]
["Grot_13G019010","A","Grai_13G010470","B"]
["Grot_13G018990","A","Grai_13G010480","B"]
["Grot_13G018700","A","Grai_13G010640","B"]
["Grot_13G018590","A","Grai_13G010720","B"]
["Grot_13G018580","A","Grai_13G010730","B"]
["Grot_13G018480","A","Grai_13G010750","B"]
["Grot_13G018470","A","Grai_13G010760","B"]
["Grot_13G018160","A","Grai_13G010900","B"]
["Grot_13G018150","A","Grai_13G010910","B"]
["Grot_13G018110","A","Grai_13G010920","B"]
["Grot_13G017990","A","Grai_13G011020","B"]
["Grot_13G017980","A","Grai_13G011030","B"]
["Grot_13G017840","A","Grai_13G011220","B"]
["Grot_13G017540","A","Grai_13G011710","B"]
["Grot_13G017520","A","Grai_13G011730","B"]
["Grot_13G017390","A","Grai_13G011820","B"]
["Grot_13G016670","B","Grai_13G012070","A"]
["Grot_13G016710","A","Grai_13G012190","B"]
["Grot_13G016960","A","Grai_13G012530","B"]
["Grot_13G016970","A","Grai_13G012540","B"]
["Grot_13G016990","A","Grai_13G012610","B"]
["Grot_13G017170","A","Grai_13G012760","B"]
["Grot_13G017190","A","Grai_13G012770","B"]
["Grot_13G017250","A","Grai_13G012820","B"]
["Grot_13G017260","A","Grai_13G012830","B"]
["Grot_13G017290","A","Grai_13G012840","B"]
["Grot_13G016370","A","Grai_13G013090","B"]
["Grot_13G016360","A","Grai_13G013130","B"]
["Grot_13G016330","A","Grai_13G013160","B"]
["Grot_13G016110","A","Grai_13G013260","B"]
["Grot_13G016000","A","Grai_13G013320","B"]
["Grot_13G015990","A","Grai_13G013330","B"]
["Grot_13G015970","A","Grai_13G013470","B"]
["Grot_13G015950","A","Grai_13G013500","B"]
["Grot_13G015940","A","Grai_13G013530","B"]
["Grot_13G015920","A","Grai_13G013540","B"]
["Grot_13G015500","A","Grai_13G013910","B"]
["Grot_13G015480","A","Grai_13G013940","B"]
["Grot_13G015470","A","Grai_13G013950","B"]
["Grot_13G015300","A","Grai_13G014080","B"]
["Grot_13G015290","A","Grai_13G014110","B"]
["Grot_13G015220","A","Grai_13G014150","B"]
["Grot_13G015200","A","Grai_13G014160","B"]
["Grot_13G015030","A","Grai_13G014350","B"]
["Grot_13G014970","A","Grai_13G014370","B"]
["Grot_13G014950","A","Grai_13G014410","B"]
["Grot_13G014890","A","Grai_13G014460","B"]
["Grot_13G014880","A","Grai_13G014470","B"]
["Grot_13G014860","A","Grai_13G014480","B"]
["Grot_13G014840","A","Grai_13G014500","B"]
["Grot_13G014830","A","Grai_13G014510","B"]
["Grot_13G014820","A","Grai_13G014530","B"]
["Grot_13G014810","A","Grai_13G014540","B"]
["Grot_13G014740","A","Grai_13G014590","B"]
["Grot_13G014720","A","Grai_13G014610","B"]
["Grot_13G014710","A","Grai_13G014620","B"]
["Grot_13G014600","A","Grai_13G014660","B"]
["Grot_13G014590","A","Grai_13G014670","B"]
["Grot_13G014580","A","Grai_13G014680","B"]
["Grot_13G014510","A","Grai_13G014760","B"]
["Grot_13G014370","A","Grai_13G014870","B"]
["Grot_13G014340","A","Grai_13G014880","B"]
["Grot_13G014200","A","Grai_13G015050","B"]
["Grot_13G014190","A","Grai_13G015070","B"]
["Grot_13G014160","A","Grai_13G015090","B"]
["Grot_13G014150","A","Grai_13G015140","B"]
["Grot_13G014140","A","Grai_13G015150","B"]
["Grot_13G014000","A","Grai_13G015330","B"]
["Grot_13G013990","A","Grai_13G015340","B"]
["Grot_13G013970","A","Grai_13G015350","B"]
["Grot_13G013960","A","Grai_13G015390","B"]
["Grot_13G013870","A","Grai_13G015460","B"]
["Grot_13G013840","A","Grai_13G015480","B"]
["Grot_13G013830","A","Grai_13G015490","B"]
["Grot_13G013810","A","Grai_13G015510","B"]
["Grot_13G013800","A","Grai_13G015520","B"]
["Grot_13G013500","A","Grai_13G015850","B"]
["Grot_13G013480","A","Grai_13G015880","B"]
["Grot_13G013470","A","Grai_13G015900","B"]
["Grot_13G013460","A","Grai_13G015910","B"]
["Grot_13G013430","A","Grai_13G015920","B"]
["Grot_13G013420","A","Grai_13G015940","B"]
["Grot_13G013360","A","Grai_13G016000","B"]
["Grot_13G013330","A","Grai_13G016030","B"]
["Grot_13G013320","A","Grai_13G016040","B"]
["Grot_13G013310","A","Grai_13G016060","B"]
["Grot_13G013290","A","Grai_13G016070","B"]
["Grot_13G013270","A","Grai_13G016090","B"]
["Grot_13G013240","A","Grai_13G016100","B"]
["Grot_13G013220","A","Grai_13G016120","B"]
["Grot_13G013180","A","Grai_13G016160","B"]
["Grot_13G013140","A","Grai_13G016240","B"]
["Grot_13G013130","A","Grai_13G016250","B"]
["Grot_13G013110","A","Grai_13G016260","B"]
["Grot_13G013080","A","Grai_13G016270","B"]
["Grot_13G013070","A","Grai_13G016280","B"]
["Grot_13G012940","A","Grai_13G016390","B"]
["Grot_13G012870","A","Grai_13G016440","B"]
["Grot_13G012860","A","Grai_13G016450","B"]
["Grot_13G012780","A","Grai_13G016520","B"]
["Grot_13G012730","A","Grai_13G016590","B"]
["Grot_13G012620","A","Grai_13G016670","B"]
["Grot_13G012610","A","Grai_13G016690","B"]
["Grot_13G012600","A","Grai_13G016700","B"]
["Grot_13G012580","A","Grai_13G016730","B"]
["Grot_13G012550","A","Grai_13G016750","B"]
["Grot_13G012520","A","Grai_13G016790","B"]
["Grot_13G012480","A","Grai_13G016820","B"]
["Grot_13G012470","A","Grai_13G016830","B"]
["Grot_13G012460","A","Grai_13G016840","B"]
["Grot_13G012430","A","Grai_13G016850","B"]
["Grot_13G012420","A","Grai_13G016890","B"]
["Grot_13G012410","A","Grai_13G016900","B"]
["Grot_13G012400","A","Grai_13G016910","B"]
["Grot_13G012390","A","Grai_13G016920","B"]
["Grot_13G012340","A","Grai_13G016950","B"]
["Grot_13G012260","A","Grai_13G017020","B"]
["Grot_13G012250","A","Grai_13G017030","B"]
["Grot_13G012240","A","Grai_13G017050","B"]
["Grot_13G012190","A","Grai_13G017080","B"]
["Grot_13G012130","A","Grai_13G017170","B"]
["Grot_13G012120","A","Grai_13G017180","B"]
["Grot_13G012100","A","Grai_13G017200","B"]
["Grot_13G011270","A","Grai_13G017970","B"]
["Grot_13G011260","A","Grai_13G017980","B"]
["Grot_13G011130","A","Grai_13G018100","B"]
["Grot_13G011020","A","Grai_13G018120","B"]
["Grot_13G011000","A","Grai_13G018130","B"]
["Grot_13G010970","A","Grai_13G018140","B"]
["Grot_13G010920","A","Grai_13G018180","B"]
["Grot_13G010910","A","Grai_13G018190","B"]
["Grot_13G010810","A","Grai_13G018290","B"]
["Grot_13G010800","A","Grai_13G018320","B"]
["Grot_13G010790","A","Grai_13G018350","B"]
["Grot_13G010760","A","Grai_13G018360","B"]
["Grot_13G010750","A","Grai_13G018390","B"]
["Grot_13G010740","A","Grai_13G018400","B"]
["Grot_13G010730","A","Grai_13G018410","B"]
["Grot_13G010680","B","Grai_13G018510","A"]
["Grot_13G010050","A","Grai_13G019140","B"]
["Grot_13G010000","A","Grai_13G019190","B"]
["Grot_13G009990","A","Grai_13G019260","B"]
["Grot_13G009970","A","Grai_13G019270","B"]
["Grot_13G009730","B","Grai_13G019460","A"]
["Grot_13G007190","B","Grai_13G022510","A"]
["Grot_13G007200","B","Grai_13G022520","A"]
["Grot_13G007350","B","Grai_13G022680","A"]
["Grot_13G007370","B","Grai_13G022720","A"]
["Grot_13G007670","A","Grai_13G023040","B"]
["Grot_13G007690","A","Grai_13G023080","B"]
["Grot_13G007750","A","Grai_13G023180","B"]
["Grot_13G007820","B","Grai_13G023240","A"]
["Grot_13G005550","B","Grai_13G024420","A"]

{"sheet":"Table S12","index":11,"n_rows":3833,"n_cols":4,"rows_kept":3833}
["Supplementary Table 12.  Summary of A/B compartment switching genes in A2 versus D5 genome."]
["A2","Status","D5","Status"]
["Garb_01G022330","A","Grai_01G007540","B"]
["Garb_01G022320","A","Grai_01G007550","B"]
["Garb_01G022280","A","Grai_01G007570","B"]
["Garb_01G022230","A","Grai_01G007610","B"]
["Garb_01G022160","A","Grai_01G007670","B"]
["Garb_01G019710","A","Grai_01G010160","B"]
["Garb_01G019650","A","Grai_01G010180","B"]
["Garb_01G019620","A","Grai_01G010190","B"]
["Garb_01G019610","A","Grai_01G010210","B"]
["Garb_01G019570","A","Grai_01G010230","B"]
["Garb_01G019560","A","Grai_01G010240","B"]
["Garb_01G019550","A","Grai_01G010250","B"]
["Garb_01G019500","A","Grai_01G010300","B"]
["Garb_01G019480","A","Grai_01G010310","B"]
["Garb_01G019460","A","Grai_01G010350","B"]
["Garb_01G019450","A","Grai_01G010360","B"]
["Garb_01G019440","A","Grai_01G010380","B"]
["Garb_01G019430","A","Grai_01G010400","B"]
["Garb_01G019420","A","Grai_01G010410","B"]
["Garb_01G019370","A","Grai_01G010440","B"]
["Garb_01G019280","A","Grai_01G010510","B"]
["Garb_01G019270","A","Grai_01G010520","B"]
["Garb_01G019170","A","Grai_01G010640","B"]
["Garb_01G018010","A","Grai_01G012420","B"]
["Garb_01G017890","A","Grai_01G012520","B"]
["Garb_01G017870","A","Grai_01G012530","B"]
["Garb_01G017830","A","Grai_01G012600","B"]
["Garb_01G017740","A","Grai_01G012690","B"]
["Garb_01G017730","A","Grai_01G012700","B"]
["Garb_01G017340","A","Grai_01G013270","B"]
["Garb_01G017320","A","Grai_01G013290","B"]
["Garb_01G017310","A","Grai_01G013300","B"]
["Garb_01G017300","A","Grai_01G013310","B"]
["Garb_01G017290","A","Grai_01G013320","B"]
["Garb_01G017280","A","Grai_01G013330","B"]
["Garb_01G017270","A","Grai_01G013350","B"]
["Garb_01G017210","A","Grai_01G013380","B"]
["Garb_01G017200","A","Grai_01G013390","B"]
["Garb_01G017190","A","Grai_01G013410","B"]
["Garb_01G017170","A","Grai_01G013420","B"]
["Garb_01G017160","A","Grai_01G013430","B"]
["Garb_01G017150","A","Grai_01G013450","B"]
["Garb_01G017130","A","Grai_01G013460","B"]
["Garb_01G017120","A","Grai_01G013470","B"]
["Garb_01G017100","A","Grai_01G013490","B"]
["Garb_01G017080","A","Grai_01G013500","B"]
["Garb_01G017070","A","Grai_01G013520","B"]
["Garb_01G017000","A","Grai_01G013600","B"]
["Garb_01G016940","A","Grai_01G013640","B"]
["Garb_01G016920","A","Grai_01G013710","B"]
["Garb_01G016890","A","Grai_01G013720","B"]
["Garb_01G016870","A","Grai_01G013740","B"]
["Garb_01G016810","A","Grai_01G013780","B"]
["Garb_01G016780","A","Grai_01G013800","B"]
["Garb_01G014680","A","Grai_01G013980","B"]
["Garb_01G014490","A","Grai_01G014170","B"]
["Garb_01G014470","A","Grai_01G014190","B"]
["Garb_01G014440","A","Grai_01G014230","B"]
["Garb_01G014410","A","Grai_01G014250","B"]
["Garb_01G014400","A","Grai_01G014260","B"]
["Garb_01G014390","A","Grai_01G014270","B"]
["Garb_01G014350","A","Grai_01G014300","B"]
["Garb_01G014210","A","Grai_01G014380","B"]
["Garb_01G014190","A","Grai_01G014430","B"]
["Garb_01G014170","A","Grai_01G014450","B"]
["Garb_01G014140","A","Grai_01G014470","B"]
["Garb_01G014130","A","Grai_01G014480","B"]
["Garb_01G014120","A","Grai_01G014490","B"]
["Garb_01G014090","A","Grai_01G014510","B"]
["Garb_01G014080","A","Grai_01G014520","B"]
["Garb_01G014040","A","Grai_01G014530","B"]
["Garb_01G014030","A","Grai_01G014540","B"]
["Garb_01G014000","A","Grai_01G014550","B"]
["Garb_01G013840","A","Grai_01G014560","B"]
["Garb_01G013830","A","Grai_01G014580","B"]
["Garb_01G013780","A","Grai_01G014600","B"]
["Garb_01G013680","A","Grai_01G014720","B"]
["Garb_01G013260","A","Grai_01G015120","B"]
["Garb_01G013160","A","Grai_01G015210","B"]
["Garb_01G013150","A","Grai_01G015220","B"]
["Garb_01G013140","A","Grai_01G015230","B"]
["Garb_01G013130","A","Grai_01G015240","B"]
["Garb_01G013120","A","Grai_01G015250","B"]
["Garb_01G013080","A","Grai_01G015270","B"]
["Garb_01G013070","A","Grai_01G015280","B"]
["Garb_01G013050","A","Grai_01G015290","B"]
["Garb_01G013020","A","Grai_01G015300","B"]
["Garb_01G013010","A","Grai_01G015310","B"]
["Garb_01G013000","A","Grai_01G015320","B"]
["Garb_01G012020","A","Grai_01G015640","B"]
["Garb_01G012030","A","Grai_01G015650","B"]
["Garb_01G012050","A","Grai_01G015660","B"]
["Garb_01G012090","A","Grai_01G015680","B"]
["Garb_01G012100","A","Grai_01G015690","B"]
["Garb_01G012110","A","Grai_01G015700","B"]
["Garb_01G012120","A","Grai_01G015710","B"]
["Garb_01G012140","A","Grai_01G015720","B"]
["Garb_01G012150","A","Grai_01G015740","B"]
["Garb_01G012170","A","Grai_01G015760","B"]
["Garb_01G012180","A","Grai_01G015770","B"]
["Garb_01G012190","A","Grai_01G015780","B"]
["Garb_01G012280","A","Grai_01G015900","B"]
["Garb_01G012290","A","Grai_01G015930","B"]
["Garb_01G012300","A","Grai_01G015940","B"]
["Garb_01G012310","A","Grai_01G015950","B"]
["Garb_01G012330","A","Grai_01G015970","B"]
["Garb_01G012340","A","Grai_01G015980","B"]
["Garb_01G012370","A","Grai_01G016000","B"]
["Garb_01G012410","A","Grai_01G016050","B"]
["Garb_01G012440","A","Grai_01G016080","B"]
["Garb_01G012460","A","Grai_01G016100","B"]
["Garb_02G012440","A","Grai_01G016240","B"]
["Garb_02G012430","A","Grai_01G016250","B"]
["Garb_02G012310","B","Grai_01G016310","A"]
["Garb_02G012180","A","Grai_01G016450","B"]
["Garb_02G012160","A","Grai_01G016470","B"]
["Garb_02G012150","A","Grai_01G016480","B"]
["Garb_02G012140","A","Grai_01G016490","B"]
["Garb_02G012130","A","Grai_01G016510","B"]
["Garb_02G012120","A","Grai_01G016520","B"]
["Garb_02G012030","A","Grai_01G016590","B"]
["Garb_02G011900","A","Grai_01G016780","B"]
["Garb_02G011880","A","Grai_01G016800","B"]
["Garb_02G011820","A","Grai_01G016820","B"]
["Garb_02G011760","A","Grai_01G016830","B"]
["Garb_02G011750","A","Grai_01G016840","B"]
["Garb_02G011730","A","Grai_01G016860","B"]
["Garb_02G011550","A","Grai_01G017020","B"]
["Garb_02G011540","A","Grai_01G017030","B"]
["Garb_02G011530","A","Grai_01G017040","B"]
["Garb_02G011520","A","Grai_01G017050","B"]
["Garb_02G011510","A","Grai_01G017060","B"]
["Garb_02G011470","A","Grai_01G017070","B"]
["Garb_02G011430","A","Grai_01G017110","B"]
["Garb_02G011310","A","Grai_01G017220","B"]
["Garb_02G011080","A","Grai_01G017500","B"]
["Garb_02G011060","A","Grai_01G017510","B"]
["Garb_02G011000","A","Grai_01G017540","B"]
["Garb_02G010990","A","Grai_01G017570","B"]
["Garb_02G010970","A","Grai_01G017580","B"]
["Garb_02G013210","A","Grai_01G017710","B"]
["Garb_02G013110","A","Grai_01G017790","B"]
["Garb_02G013060","A","Grai_01G017820","B"]
["Garb_02G013050","A","Grai_01G017830","B"]
["Garb_02G013040","A","Grai_01G017840","B"]
["Garb_02G013030","A","Grai_01G017860","B"]
["Garb_02G013020","A","Grai_01G017870","B"]
["Garb_02G013000","A","Grai_01G017890","B"]
["Garb_02G012990","A","Grai_01G017900","B"]
["Garb_02G012970","A","Grai_01G017910","B"]
["Garb_02G012950","A","Grai_01G017930","B"]
["Garb_02G012940","A","Grai_01G017940","B"]
["Garb_02G012930","A","Grai_01G017950","B"]
["Garb_02G012920","A","Grai_01G017960","B"]
["Garb_02G012910","A","Grai_01G017990","B"]
["Garb_02G012900","A","Grai_01G018000","B"]
["Garb_02G012890","A","Grai_01G018010","B"]
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["Garb_13G012700","A","Grai_13G010820","B"]
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["Garb_13G012740","A","Grai_13G010840","B"]
["Garb_13G012860","A","Grai_13G010900","B"]
["Garb_13G012870","A","Grai_13G010910","B"]
["Garb_13G012960","A","Grai_13G011020","B"]
["Garb_13G013050","A","Grai_13G011100","B"]
["Garb_13G013070","A","Grai_13G011160","B"]
["Garb_13G013160","B","Grai_13G011270","A"]
["Garb_13G013190","A","Grai_13G011510","B"]
["Garb_13G013250","A","Grai_13G011730","B"]
["Garb_13G011970","A","Grai_13G011830","B"]
["Garb_13G011950","A","Grai_13G011840","B"]
["Garb_13G011940","A","Grai_13G011850","B"]
["Garb_13G011930","A","Grai_13G011860","B"]
["Garb_13G011900","A","Grai_13G011910","B"]
["Garb_13G011850","A","Grai_13G011940","B"]
["Garb_13G011760","A","Grai_13G011970","B"]
["Garb_13G011720","A","Grai_13G012000","B"]
["Garb_13G011710","A","Grai_13G012010","B"]
["Garb_13G011700","A","Grai_13G012020","B"]
["Garb_13G011590","B","Grai_13G012070","A"]
["Garb_13G011450","A","Grai_13G012400","B"]
["Garb_13G011520","A","Grai_13G012510","B"]
["Garb_13G011530","A","Grai_13G012530","B"]
["Garb_13G011540","A","Grai_13G012540","B"]
["Garb_13G011690","A","Grai_13G012660","B"]
["Garb_13G012400","A","Grai_13G012870","B"]
["Garb_13G012160","A","Grai_13G013130","B"]
["Garb_13G012060","A","Grai_13G013170","B"]
["Garb_13G012050","A","Grai_13G013180","B"]
["Garb_13G012040","A","Grai_13G013200","B"]
["Garb_13G012030","A","Grai_13G013210","B"]
["Garb_13G013570","A","Grai_13G013260","B"]
["Garb_13G013630","A","Grai_13G013320","B"]
["Garb_13G013640","A","Grai_13G013330","B"]
["Garb_13G013650","A","Grai_13G013470","B"]
["Garb_13G013670","A","Grai_13G013490","B"]
["Garb_13G013680","A","Grai_13G013500","B"]
["Garb_13G013730","A","Grai_13G013530","B"]
["Garb_13G013750","A","Grai_13G013540","B"]
["Garb_13G014000","A","Grai_13G014140","B"]
["Garb_13G014170","A","Grai_13G014220","B"]
["Garb_13G014180","A","Grai_13G014230","B"]
["Garb_13G014240","A","Grai_13G014290","B"]
["Garb_13G014250","A","Grai_13G014310","B"]
["Garb_13G014290","A","Grai_13G014320","B"]
["Garb_13G014300","A","Grai_13G014350","B"]
["Garb_13G014320","A","Grai_13G014370","B"]
["Garb_13G014360","A","Grai_13G014410","B"]
["Garb_13G014440","A","Grai_13G014460","B"]
["Garb_13G014450","A","Grai_13G014470","B"]
["Garb_13G014470","A","Grai_13G014480","B"]
["Garb_13G014490","A","Grai_13G014500","B"]
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["Garb_13G014530","A","Grai_13G014540","B"]
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["Garb_13G015040","A","Grai_13G015070","B"]
["Garb_13G015060","A","Grai_13G015090","B"]
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["Garb_13G015420","A","Grai_13G015510","B"]
["Garb_13G015430","A","Grai_13G015520","B"]
["Garb_13G015770","A","Grai_13G015850","B"]
["Garb_13G015790","A","Grai_13G015880","B"]
["Garb_13G015810","A","Grai_13G015900","B"]
["Garb_13G015830","A","Grai_13G015910","B"]
["Garb_13G015840","A","Grai_13G015920","B"]
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["Garb_13G015890","A","Grai_13G016000","B"]
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["Garb_13G016510","A","Grai_13G016450","B"]
["Garb_13G016590","A","Grai_13G016510","B"]
["Garb_13G016600","A","Grai_13G016520","B"]
["Garb_13G016670","A","Grai_13G016590","B"]
["Garb_13G016750","A","Grai_13G016670","B"]
["Garb_13G016790","A","Grai_13G016690","B"]
["Garb_13G016800","A","Grai_13G016700","B"]
["Garb_13G016830","A","Grai_13G016710","B"]
["Garb_13G016850","A","Grai_13G016720","B"]
["Garb_13G016860","A","Grai_13G016730","B"]
["Garb_13G016890","A","Grai_13G016750","B"]
["Garb_13G016900","A","Grai_13G016760","B"]
["Garb_13G016920","A","Grai_13G016770","B"]
["Garb_13G016940","A","Grai_13G016790","B"]
["Garb_13G016960","A","Grai_13G016820","B"]
["Garb_13G016970","A","Grai_13G016830","B"]
["Garb_13G016990","A","Grai_13G016840","B"]
["Garb_13G017030","A","Grai_13G016850","B"]
["Garb_13G017070","A","Grai_13G016880","B"]
["Garb_13G017080","A","Grai_13G016890","B"]
["Garb_13G017090","A","Grai_13G016900","B"]
["Garb_13G017100","A","Grai_13G016910","B"]
["Garb_13G017110","A","Grai_13G016920","B"]
["Garb_13G017170","A","Grai_13G016960","B"]
["Garb_13G017240","A","Grai_13G017020","B"]
["Garb_13G017260","A","Grai_13G017030","B"]
["Garb_13G017270","A","Grai_13G017050","B"]
["Garb_13G017300","A","Grai_13G017080","B"]
["Garb_13G017320","A","Grai_13G017130","B"]
["Garb_13G017330","A","Grai_13G017150","B"]
["Garb_13G017380","A","Grai_13G017180","B"]
["Garb_13G017400","A","Grai_13G017200","B"]
["Garb_13G018080","A","Grai_13G017890","B"]
["Garb_13G018170","A","Grai_13G017970","B"]
["Garb_13G018180","A","Grai_13G017980","B"]
["Garb_13G018280","A","Grai_13G018100","B"]
["Garb_13G018320","A","Grai_13G018120","B"]
["Garb_13G018350","A","Grai_13G018130","B"]
["Garb_13G018360","A","Grai_13G018140","B"]
["Garb_13G018370","A","Grai_13G018180","B"]
["Garb_13G018380","A","Grai_13G018190","B"]
["Garb_13G018460","A","Grai_13G018250","B"]
["Garb_13G018490","A","Grai_13G018290","B"]
["Garb_13G018500","A","Grai_13G018320","B"]
["Garb_13G018510","A","Grai_13G018350","B"]
["Garb_13G018530","A","Grai_13G018360","B"]
["Garb_13G018540","A","Grai_13G018390","B"]
["Garb_13G018550","A","Grai_13G018400","B"]
["Garb_13G018560","A","Grai_13G018410","B"]
["Garb_13G018610","A","Grai_13G018490","B"]
["Garb_13G019170","A","Grai_13G019130","B"]
["Garb_13G019180","A","Grai_13G019140","B"]
["Garb_13G019220","A","Grai_13G019190","B"]
["Garb_13G019250","A","Grai_13G019260","B"]
["Garb_13G019260","A","Grai_13G019270","B"]
["Garb_13G021940","A","Grai_13G023040","B"]
["Garb_13G021910","A","Grai_13G023080","B"]
["Garb_13G021870","A","Grai_13G023090","B"]
["Garb_13G021860","A","Grai_13G023180","B"]

{"sheet":"Table S13","index":12,"n_rows":3695,"n_cols":7,"rows_kept":3695}
["Supplementary Table 13. The A-B-A and B-A-B compartment transition genes of G.rotundifolium (K2), G. arboreum (A2) and G. raimondii (D5) genomes. "]
["K2 orthologous","A2 orthologous","D5 orthologous","Switch","K2 expression","A2 expression","D5 expression"]
["Grot_02G010290","Garb_01G010910","Grai_02G011300","ABA",{"v":0,"d":"0.00"},{"v":0.125995,"d":"0.13"},{"v":7.811708,"d":"7.81"}]
["Grot_03G017270","Garb_03G016400","Grai_03G012850","ABA",{"v":0.271837,"d":"0.27"},{"v":0.162392,"d":"0.16"},{"v":4.941792,"d":"4.94"}]
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["Grot_11G015440","Garb_11G024170","Grai_11G016240","BAA",{"v":0,"d":"0.00"},{"v":0.23132,"d":"0.23"},{"v":0.446533,"d":"0.45"}]
["Grot_11G012320","Garb_11G027230","Grai_11G013660","BAA",{"v":0.044555,"d":"0.04"},{"v":0.089432,"d":"0.09"},{"v":0,"d":"0.00"}]
["Grot_11G013130","Garb_11G028840","Grai_11G011670","BAA",{"v":1.157928,"d":"1.16"},{"v":0.711533,"d":"0.71"},{"v":1.016225,"d":"1.02"}]
["Grot_11G011290","Garb_11G028000","Grai_11G012970","BAA",{"v":0.417045,"d":"0.42"},{"v":1.211046,"d":"1.21"},{"v":0.110929,"d":"0.11"}]
["Grot_11G011250","Garb_11G028080","Grai_11G012930","BAA",{"v":0,"d":"0.00"},{"v":0.054526,"d":"0.05"},{"v":0.058673,"d":"0.06"}]
["Grot_12G012870","Garb_12G010290","Grai_12G009340","BAA",{"v":17.27442,"d":"17.27"},{"v":1.797492,"d":"1.80"},{"v":7.026898,"d":"7.03"}]
["Grot_12G015100","Garb_12G012090","Grai_12G011970","BAA",{"v":0,"d":"0.00"},{"v":0.05142,"d":"0.05"},{"v":0.187165,"d":"0.19"}]
["Grot_12G015130","Garb_12G012100","Grai_12G011990","BAA",{"v":0.033093,"d":"0.03"},{"v":0.027376,"d":"0.03"},{"v":0,"d":"0.00"}]
["Grot_12G015500","Garb_12G009080","Grai_12G011260","BAA",{"v":11.144488,"d":"11.14"},{"v":10.148766,"d":"10.15"},{"v":2.981578,"d":"2.98"}]
["Grot_12G015540","Garb_12G009100","Grai_12G011240","BAA",{"v":18.30711,"d":"18.31"},{"v":32.827648,"d":"32.83"},{"v":29.773705,"d":"29.77"}]
["Grot_12G012650","Garb_12G012300","Grai_12G012170","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["Grot_12G012640","Garb_12G012310","Grai_12G012180","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0.329537,"d":"0.33"}]
["Grot_12G011040","Garb_12G013940","Grai_12G013690","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["Grot_12G009470","Garb_12G015530","Grai_12G015260","BAA",{"v":3.231463,"d":"3.23"},{"v":0.249861,"d":"0.25"},{"v":0.248274,"d":"0.25"}]
["Grot_12G007960","Garb_12G016910","Grai_12G016730","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["Grot_12G019440","Garb_12G006180","Grai_12G005910","BAA",{"v":0,"d":"0.00"},{"v":0.683713,"d":"0.68"},{"v":0.218572,"d":"0.22"}]
["Grot_12G018330","Garb_12G007130","Grai_12G006990","BAA",{"v":48.708866,"d":"48.71"},{"v":21.485952,"d":"21.49"},{"v":6.862233,"d":"6.86"}]
["Grot_12G017880","Garb_12G007570","Grai_12G007410","BAA",{"v":0,"d":"0.00"},{"v":2.799061,"d":"2.80"},{"v":1.607818,"d":"1.61"}]
["Grot_12G017560","Garb_12G007940","Grai_12G007840","BAA",{"v":0.286473,"d":"0.29"},{"v":0.873597,"d":"0.87"},{"v":0.164966,"d":"0.16"}]
["Grot_12G006830","Garb_12G018340","Grai_12G018140","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":1.693234,"d":"1.69"}]
["Grot_12G006760","Garb_12G018400","Grai_12G018210","BAA",{"v":0.123418,"d":"0.12"},{"v":0.908859,"d":"0.91"},{"v":2.610834,"d":"2.61"}]
["Grot_12G006720","Garb_12G018430","Grai_12G018230","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["Grot_12G006600","Garb_12G018500","Grai_12G018280","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":1.866176,"d":"1.87"}]
["Grot_13G020650","Garb_13G007820","Grai_13G007930","BAA",{"v":2.691277,"d":"2.69"},{"v":9.464527,"d":"9.46"},{"v":1.024477,"d":"1.02"}]
["Grot_13G021590","Garb_13G008640","Grai_13G008710","BAA",{"v":0.901942,"d":"0.90"},{"v":1.122129,"d":"1.12"},{"v":3.338912,"d":"3.34"}]
["Grot_13G021610","Garb_13G008650","Grai_13G008720","BAA",{"v":26.187115,"d":"26.19"},{"v":22.036133,"d":"22.04"},{"v":23.102455,"d":"23.10"}]
["Grot_13G016780","Garb_13G011690","Grai_13G012030","BAA",{"v":0,"d":"0.00"},{"v":0.067227,"d":"0.07"},{"v":0,"d":"0.00"}]
["Grot_13G017580","Garb_13G011900","Grai_13G011910","BAA",{"v":14.143495,"d":"14.14"},{"v":13.239819,"d":"13.24"},{"v":13.523673,"d":"13.52"}]
["Grot_13G017630","Garb_13G011950","Grai_13G011840","BAA",{"v":39.349422,"d":"39.35"},{"v":29.541037,"d":"29.54"},{"v":54.980392,"d":"54.98"}]
["Grot_13G015150","Garb_13G014170","Grai_13G014220","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0.05436,"d":"0.05"}]
["Grot_13G015140","Garb_13G014180","Grai_13G014230","BAA",{"v":32.46019,"d":"32.46"},{"v":24.674788,"d":"24.67"},{"v":25.439013,"d":"25.44"}]
["Grot_13G015100","Garb_13G014250","Grai_13G014310","BAA",{"v":0,"d":"0.00"},{"v":0.257366,"d":"0.26"},{"v":0.536519,"d":"0.54"}]
["Grot_13G013230","Garb_13G015990","Grai_13G016110","BAA",{"v":6.941361,"d":"6.94"},{"v":8.659164,"d":"8.66"},{"v":4.951303,"d":"4.95"}]
["Grot_13G012800","Garb_13G016590","Grai_13G016510","BAA",{"v":0,"d":"0.00"},{"v":0.114221,"d":"0.11"},{"v":0.314135,"d":"0.31"}]
["Grot_13G012290","Garb_13G017170","Grai_13G016960","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["Grot_13G010820","Garb_13G018460","Grai_13G018250","BAA",{"v":1.574699,"d":"1.57"},{"v":33.562649,"d":"33.56"},{"v":118.846458,"d":"118.85"}]
["Grot_13G010700","Garb_13G018610","Grai_13G018490","BAA",{"v":0.208215,"d":"0.21"},{"v":0.40644,"d":"0.41"},{"v":1.109777,"d":"1.11"}]
["Grot_13G010680","Garb_13G018640","Grai_13G018510","BAA",{"v":0.224588,"d":"0.22"},{"v":0.217506,"d":"0.22"},{"v":0.235531,"d":"0.24"}]
["Grot_13G009730","Garb_13G019480","Grai_13G019460","BAA",{"v":0.0747,"d":"0.07"},{"v":0.112205,"d":"0.11"},{"v":0.618351,"d":"0.62"}]
["Grot_13G007820","Garb_13G021820","Grai_13G023240","BAA",{"v":0,"d":"0.00"},{"v":14.298323,"d":"14.30"},{"v":14.670776,"d":"14.67"}]
["Grot_13G007370","Garb_13G022260","Grai_13G022720","BAA",{"v":0.036505,"d":"0.04"},{"v":1.07186,"d":"1.07"},{"v":0.237487,"d":"0.24"}]
["Grot_13G007350","Garb_13G022340","Grai_13G022680","BAA",{"v":6.318474,"d":"6.32"},{"v":3.803524,"d":"3.80"},{"v":6.913628,"d":"6.91"}]
["Grot_13G007200","Garb_13G022500","Grai_13G022520","BAA",{"v":78.905533,"d":"78.91"},{"v":24.089102,"d":"24.09"},{"v":234.878998,"d":"234.88"}]
["Grot_13G007190","Garb_13G022510","Grai_13G022510","BAA",{"v":0,"d":"0.00"},{"v":0.501921,"d":"0.50"},{"v":4.575351,"d":"4.58"}]
["Grot_13G005550","Garb_13G024280","Grai_13G024420","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0.151024,"d":"0.15"}]
["Grot_13G020170","Garb_13G009190","Grai_13G009200","BAA",{"v":0.104114,"d":"0.10"},{"v":0.370088,"d":"0.37"},{"v":2.100015,"d":"2.10"}]
["Grot_13G019840","Garb_13G009640","Grai_13G009610","BAA",{"v":1.628061,"d":"1.63"},{"v":1.345701,"d":"1.35"},{"v":2.600739,"d":"2.60"}]
["Grot_13G019350","Garb_13G010100","Grai_13G010120","BAA",{"v":0.045059,"d":"0.05"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["Grot_13G019280","Garb_13G010180","Grai_13G010190","BAA",{"v":1.504845,"d":"1.50"},{"v":9.343308,"d":"9.34"},{"v":4.820813,"d":"4.82"}]
["Grot_13G019170","Garb_13G010260","Grai_13G010300","BAA",{"v":1.317878,"d":"1.32"},{"v":6.329383,"d":"6.33"},{"v":0,"d":"0.00"}]
["Grot_13G019040","Garb_13G010380","Grai_13G010440","BAA",{"v":2.201085,"d":"2.20"},{"v":7.713169,"d":"7.71"},{"v":0.106888,"d":"0.11"}]
["Grot_13G022670","Garb_13G006790","Grai_13G006830","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["Grot_13G022530","Garb_13G006910","Grai_13G007010","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["Grot_13G022500","Garb_13G006950","Grai_13G007040","BAA",{"v":21.170494,"d":"21.17"},{"v":10.726991,"d":"10.73"},{"v":22.158953,"d":"22.16"}]
["Grot_13G021710","Garb_13G007750","Grai_13G007850","BAA",{"v":0,"d":"0.00"},{"v":7.73294,"d":"7.73"},{"v":0,"d":"0.00"}]
["Grot_13G021690","Garb_13G007790","Grai_13G007890","BAA",{"v":0.427459,"d":"0.43"},{"v":1.291085,"d":"1.29"},{"v":1.078548,"d":"1.08"}]
["Grot_13G018710","Garb_13G012510","Grai_13G010630","BAA",{"v":0.063803,"d":"0.06"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["Grot_13G018360","Garb_13G012700","Grai_13G010820","BAA",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["Grot_13G018330","Garb_13G012730","Grai_13G010830","BAA",{"v":12.383209,"d":"12.38"},{"v":6.099965,"d":"6.10"},{"v":8.067612,"d":"8.07"}]
["Grot_13G018320","Garb_13G012740","Grai_13G010840","BAA",{"v":0.027644,"d":"0.03"},{"v":0,"d":"0.00"},{"v":0.097201,"d":"0.10"}]

{"sheet":"Table S14","index":13,"n_rows":5379,"n_cols":5,"rows_kept":5379}
["Supplementary Table 14. Identification of TADs in three genomes."]
["Chr","Start","End","Length","Species"]
["Chr01",0,1550000,{"$f":"C3-B3","v":1550000},"K2"]
["Chr01",1550000,2300000,{"$f":"C4-B4","v":750000},"K2"]
["Chr01",2300000,3400000,1100000,"K2"]
["Chr01",3400000,4400000,1000000,"K2"]
["Chr01",4400000,5100000,700000,"K2"]
["Chr01",5350000,5950000,600000,"K2"]
["Chr01",5950000,6850000,900000,"K2"]
["Chr01",6850000,7650000,800000,"K2"]
["Chr01",7650000,8100000,450000,"K2"]
["Chr01",8100000,8800000,700000,"K2"]
["Chr01",8800000,9800000,1000000,"K2"]
["Chr01",9800000,10300000,500000,"K2"]
["Chr01",10300000,10650000,350000,"K2"]
["Chr01",10650000,11100000,450000,"K2"]
["Chr01",11100000,12200000,1100000,"K2"]
["Chr01",12200000,12750000,550000,"K2"]
["Chr01",12750000,13200000,450000,"K2"]
["Chr01",13200000,13800000,600000,"K2"]
["Chr01",13800000,15050000,1250000,"K2"]
["Chr01",15050000,15700000,650000,"K2"]
["Chr01",15700000,16450000,750000,"K2"]
["Chr01",16450000,17300000,850000,"K2"]
["Chr01",17300000,17600000,300000,"K2"]
["Chr01",17600000,18200000,600000,"K2"]
["Chr01",18200000,18500000,300000,"K2"]
["Chr01",18850000,19550000,700000,"K2"]
["Chr01",19550000,20200000,650000,"K2"]
["Chr01",20200000,21350000,1150000,"K2"]
["Chr01",21350000,22450000,1100000,"K2"]
["Chr01",22450000,22900000,450000,"K2"]
["Chr01",22900000,23850000,950000,"K2"]
["Chr01",23850000,24500000,650000,"K2"]
["Chr01",24500000,24800000,300000,"K2"]
["Chr01",24800000,25450000,650000,"K2"]
["Chr01",25450000,25850000,400000,"K2"]
["Chr01",25850000,26550000,700000,"K2"]
["Chr01",26550000,27100000,550000,"K2"]
["Chr01",27100000,28400000,1300000,"K2"]
["Chr01",28400000,29150000,750000,"K2"]
["Chr01",29150000,30250000,1100000,"K2"]
["Chr01",30250000,31500000,1250000,"K2"]
["Chr01",31500000,31950000,450000,"K2"]
["Chr01",31950000,32400000,450000,"K2"]
["Chr01",32400000,33400000,1000000,"K2"]
["Chr01",33400000,34750000,1350000,"K2"]
["Chr01",34750000,35250000,500000,"K2"]
["Chr01",35250000,36250000,1000000,"K2"]
["Chr01",36250000,37650000,1400000,"K2"]
["Chr01",37650000,39000000,1350000,"K2"]
["Chr01",39000000,39900000,900000,"K2"]
["Chr01",39900000,40700000,800000,"K2"]
["Chr01",40700000,41500000,800000,"K2"]
["Chr01",41500000,41800000,300000,"K2"]
["Chr01",41800000,43000000,1200000,"K2"]
["Chr01",43000000,43900000,900000,"K2"]
["Chr01",43900000,44750000,850000,"K2"]
["Chr01",44750000,46250000,1500000,"K2"]
["Chr01",46250000,47400000,1150000,"K2"]
["Chr01",47400000,49050000,1650000,"K2"]
["Chr01",49050000,49650000,600000,"K2"]
["Chr01",49650000,50250000,600000,"K2"]
["Chr01",50250000,50700000,450000,"K2"]
["Chr01",50700000,51000000,300000,"K2"]
["Chr01",51000000,51900000,900000,"K2"]
["Chr01",51900000,52200000,300000,"K2"]
["Chr01",52200000,52850000,{"$f":"C68-B68","v":650000},"K2"]
["Chr01",52850000,53600000,750000,"K2"]
["Chr01",53600000,54350000,750000,"K2"]
["Chr01",54350000,55200000,850000,"K2"]
["Chr01",58900000,59950000,1050000,"K2"]
["Chr01",59950000,60400000,450000,"K2"]
["Chr01",60400000,60800000,400000,"K2"]
["Chr01",60800000,61250000,450000,"K2"]
["Chr01",61250000,62400000,1150000,"K2"]
["Chr01",62400000,63050000,650000,"K2"]
["Chr01",63050000,63850000,800000,"K2"]
["Chr01",63850000,64450000,600000,"K2"]
["Chr01",64450000,65050000,600000,"K2"]
["Chr01",65050000,66100000,1050000,"K2"]
["Chr01",66100000,67200000,1100000,"K2"]
["Chr01",67200000,68400000,1200000,"K2"]
["Chr01",68400000,69100000,700000,"K2"]
["Chr01",69100000,69750000,650000,"K2"]
["Chr01",69750000,70650000,900000,"K2"]
["Chr01",70650000,71050000,400000,"K2"]
["Chr01",71050000,71700000,650000,"K2"]
["Chr01",71700000,72400000,700000,"K2"]
["Chr01",72400000,74050000,1650000,"K2"]
["Chr01",74050000,74750000,700000,"K2"]
["Chr01",74750000,75400000,650000,"K2"]
["Chr01",75400000,75900000,500000,"K2"]
["Chr01",75900000,76450000,550000,"K2"]
["Chr01",76450000,77300000,850000,"K2"]
["Chr01",77300000,78650000,1350000,"K2"]
["Chr01",78650000,79400000,750000,"K2"]
["Chr01",79400000,80150000,750000,"K2"]
["Chr01",80150000,80950000,800000,"K2"]
["Chr01",80950000,81400000,450000,"K2"]
["Chr01",81400000,81700000,300000,"K2"]
["Chr01",81700000,82050000,350000,"K2"]
["Chr01",82050000,82850000,800000,"K2"]
["Chr01",82850000,83200000,350000,"K2"]
["Chr01",83200000,84000000,800000,"K2"]
["Chr01",84000000,84350000,350000,"K2"]
["Chr01",84350000,85000000,650000,"K2"]
["Chr01",85000000,86250000,1250000,"K2"]
["Chr01",86250000,87150000,900000,"K2"]
["Chr01",87150000,87600000,450000,"K2"]
["Chr01",87600000,88000000,400000,"K2"]
["Chr01",88000000,90200000,2200000,"K2"]
["Chr01",90200000,90900000,700000,"K2"]
["Chr01",90900000,91750000,850000,"K2"]
["Chr01",91750000,94150000,2400000,"K2"]
["Chr01",94150000,94700000,550000,"K2"]
["Chr01",94700000,95500000,800000,"K2"]
["Chr01",95500000,96400000,900000,"K2"]
["Chr01",96400000,97500000,1100000,"K2"]
["Chr01",97500000,98300000,800000,"K2"]
["Chr01",98300000,99200000,900000,"K2"]
["Chr01",99200000,99700000,500000,"K2"]
["Chr01",99700000,100500000,800000,"K2"]
["Chr01",100500000,101000000,500000,"K2"]
["Chr01",101000000,103000000,2000000,"K2"]
["Chr01",103000000,104250000,1250000,"K2"]
["Chr01",104250000,104600000,350000,"K2"]
["Chr01",104600000,105000000,400000,"K2"]
["Chr01",105000000,106450000,1450000,"K2"]
["Chr01",106450000,108350000,1900000,"K2"]
["Chr01",108350000,109200000,850000,"K2"]
["Chr01",109200000,110100000,{"$f":"C132-B132","v":900000},"K2"]
["Chr01",110100000,110650000,550000,"K2"]
["Chr01",110650000,111050000,400000,"K2"]
["Chr01",111050000,111450000,400000,"K2"]
["Chr01",111450000,111750000,300000,"K2"]
["Chr01",111750000,112950000,1200000,"K2"]
["Chr01",112950000,113650000,700000,"K2"]
["Chr01",113650000,114050000,400000,"K2"]
["Chr01",114050000,114750000,700000,"K2"]
["Chr01",114750000,115150000,400000,"K2"]
["Chr01",115300000,116250000,950000,"K2"]
["Chr01",116250000,117300000,1050000,"K2"]
["Chr01",117300000,118350000,1050000,"K2"]
["Chr01",118350000,119050000,700000,"K2"]
["Chr01",119050000,121550000,2500000,"K2"]
["Chr01",121550000,121850000,300000,"K2"]
["Chr01",121850000,122900000,1050000,"K2"]
["Chr01",122900000,123700000,800000,"K2"]
["Chr01",123700000,126650000,2950000,"K2"]
["Chr01",126650000,127950000,1300000,"K2"]
["Chr01",127950000,128500000,550000,"K2"]
["Chr01",128500000,128850000,350000,"K2"]
["Chr01",128850000,130850000,2000000,"K2"]
["Chr01",130850000,131450000,600000,"K2"]
["Chr01",131700000,133700000,2000000,"K2"]
["Chr01",133700000,135100000,1400000,"K2"]
["Chr01",135100000,135950000,850000,"K2"]
["Chr01",135950000,137450000,1500000,"K2"]
["Chr01",137450000,138400000,950000,"K2"]
["Chr01",138400000,139800000,1400000,"K2"]
["Chr01",139800000,141950000,2150000,"K2"]
["Chr01",141950000,143500000,1550000,"K2"]
["Chr01",143500000,143850000,350000,"K2"]
["Chr01",143850000,146600000,2750000,"K2"]
["Chr01",146600000,147700000,1100000,"K2"]
["Chr01",147700000,148100000,400000,"K2"]
["Chr01",148100000,148450000,350000,"K2"]
["Chr01",148450000,149050000,600000,"K2"]
["Chr01",149250000,150500000,1250000,"K2"]
["Chr01",150500000,150950000,450000,"K2"]
["Chr01",150950000,151350000,400000,"K2"]
["Chr01",151350000,151850000,500000,"K2"]
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["Chr13",16600000,17200000,600000,"D5"]
["Chr13",17200000,17600000,400000,"D5"]
["Chr13",17600000,18050000,450000,"D5"]
["Chr13",18050000,18500000,450000,"D5"]
["Chr13",18500000,19200000,700000,"D5"]
["Chr13",19200000,20200000,1000000,"D5"]
["Chr13",20200000,20550000,350000,"D5"]
["Chr13",20550000,21550000,1000000,"D5"]
["Chr13",21550000,22050000,500000,"D5"]
["Chr13",22050000,23100000,1050000,"D5"]
["Chr13",23100000,23750000,650000,"D5"]
["Chr13",23750000,24600000,850000,"D5"]
["Chr13",24600000,25150000,550000,"D5"]
["Chr13",25150000,25600000,450000,"D5"]
["Chr13",25600000,26000000,400000,"D5"]
["Chr13",26000000,27200000,1200000,"D5"]
["Chr13",27400000,27850000,450000,"D5"]
["Chr13",27850000,28600000,750000,"D5"]
["Chr13",28600000,29450000,850000,"D5"]
["Chr13",29450000,29950000,500000,"D5"]
["Chr13",29950000,30350000,400000,"D5"]
["Chr13",30350000,30700000,350000,"D5"]
["Chr13",30700000,32250000,1550000,"D5"]
["Chr13",32500000,33050000,550000,"D5"]
["Chr13",33050000,33800000,750000,"D5"]
["Chr13",33800000,34300000,500000,"D5"]
["Chr13",34300000,34800000,500000,"D5"]
["Chr13",34800000,35300000,500000,"D5"]
["Chr13",35550000,36550000,1000000,"D5"]
["Chr13",36550000,36850000,300000,"D5"]
["Chr13",36850000,37550000,{"$f":"C5342-B5342","v":700000},"D5"]
["Chr13",37750000,38100000,350000,"D5"]
["Chr13",38100000,38800000,700000,"D5"]
["Chr13",38800000,39850000,1050000,"D5"]
["Chr13",39850000,40850000,1000000,"D5"]
["Chr13",40850000,41450000,600000,"D5"]
["Chr13",41450000,41800000,350000,"D5"]
["Chr13",41800000,42150000,350000,"D5"]
["Chr13",42350000,42700000,350000,"D5"]
["Chr13",42700000,43350000,650000,"D5"]
["Chr13",43350000,43650000,300000,"D5"]
["Chr13",43650000,43950000,300000,"D5"]
["Chr13",44150000,44450000,300000,"D5"]
["Chr13",44450000,44800000,350000,"D5"]
["Chr13",44800000,45550000,750000,"D5"]
["Chr13",45550000,46000000,450000,"D5"]
["Chr13",46000000,46300000,300000,"D5"]
["Chr13",46300000,46600000,300000,"D5"]
["Chr13",46850000,47300000,450000,"D5"]
["Chr13",47300000,47600000,300000,"D5"]
["Chr13",47600000,48200000,600000,"D5"]
["Chr13",48200000,49300000,1100000,"D5"]
["Chr13",49300000,49950000,650000,"D5"]
["Chr13",50150000,50700000,550000,"D5"]
["Chr13",50700000,51050000,350000,"D5"]
["Chr13",51300000,52350000,1050000,"D5"]
["Chr13",52350000,52750000,400000,"D5"]
["Chr13",52750000,53200000,450000,"D5"]
["Chr13",53200000,53600000,400000,"D5"]
["Chr13",53600000,53950000,350000,"D5"]
["Chr13",53950000,54450000,500000,"D5"]
["Chr13",54450000,54900000,450000,"D5"]
["Chr13",54900000,55250000,350000,"D5"]
["Chr13",55250000,55700000,450000,"D5"]
["Chr13",55700000,56850000,1150000,"D5"]
["Chr13",56850000,57350000,500000,"D5"]
["Chr13",57350000,58200000,850000,"D5"]
["Chr13",58200000,58650000,450000,"D5"]

{"sheet":"Table S15","index":14,"n_rows":96,"n_cols":5,"rows_kept":96}
["Supplementary Table 15. Summary of motifs of TAD boundaries identified in three genomes."]
["Motifs","TFs decription","P-value","Type","TAD boundaries"]
["ASWTCCTGBT","SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer",{"v":1e-05,"d":"1.00E-05"},"Known","K2 specific"]
["AWATGGCGGCGG","ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer",{"v":1E-4,"d":"1.00E-04"},"Known","K2 specific"]
["ATCSRACGGTYRAGA","ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer",{"v":1E-4,"d":"1.00E-04"},"Known","K2 specific"]
["AACCGGAAGT","ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer",{"v":1E-4,"d":"1.00E-04"},"Known","K2 specific"]
["AAYTAGGTCA","RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer",{"v":1E-3,"d":"1.00E-03"},"Known","K2 specific"]
["AAYTAGGTCA","RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer",{"v":1E-3,"d":"1.00E-03"},"Known","K2 specific"]
["HACTTCCGGY","Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer",{"v":1E-3,"d":"1.00E-03"},"Known","K2 specific"]
["TATTGAYY","Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer",{"v":1E-3,"d":"1.00E-03"},"Known","K2 specific"]
["TGGAACAGMA","ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer",{"v":1E-3,"d":"1.00E-03"},"Known","K2 specific"]
["GGCGGCGG","ERF104(AP2EREBP)/col-ERF104-DAP-Seq(GSE60143)/Homer",{"v":1E-3,"d":"1.00E-03"},"Known","K2 specific"]
["ACCGGAAGTG","ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer",{"v":1E-3,"d":"1.00E-03"},"Known","K2 specific"]
["NNNNHRGTCAAMNNN","WRKY25(WRKY)/colamp-WRKY25-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["ARATTCAATGWATYT","EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["RACCGGAAGT","GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["CATTAATTGC","ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["TRCATTCCAG","TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["BGTTGACTWH","WRKY28(WRKY)/col-WRKY28-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["TTAACCCTTTVNKKN","ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["WAAAAGTGHH","AT1G69570(C2C2dof)/col-AT1G69570-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["CGCCGCCATTTT","RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["GGTCCAAAGTCCAMT","dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["ACTTCCKGKT","Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["ACGGTAAAAW","AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["ACVAGGAAGT","ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["GGCGGCGG","ESE1(AP2EREBP)/col-ESE1-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["CAAGATGGCGGC","YY1(Zf)/Promoter/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["NNNTTGACYWNNNNN","WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["NAGATTCY","At1g25550(G2like)/colamp-At1g25550-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["WDWTGGCGGCGG","ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["CTTNHNNNDNAAGNH","SND3(NAC)/col-SND3-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["AMGGTAAAWWWN","GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["TAWCCGTTAC","MYB118(MYB)/colamp-MYB118-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["NRYTTCCGGH","Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["CACCGCTT","At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["CGCCGCCA","CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["TAATCAATTA","Pax7(Paired Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["HNACGCTCCT","MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["AAAAGTRM","CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["CACCAACCWH","MYB83(MYB)/colamp-MYB83-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["AGTAAACAAAAAAGAACAND","FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["AACCGGAAGT","ETS(ETS)/Promoter/Homer",{"v":0.01,"d":"1.00E-02"},"Known","K2 specific"]
["AGCGGYTA","At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer(0.779)",{"v":1E-14,"d":"1.00E-14"},"Novel","K2 specific"]
["GCATCGGTAG","OSR1/MA1542.1/Jaspar(0.650)",{"v":1E-13,"d":"1.00E-13"},"Novel","K2 specific"]
["TTCGTTCATGTG","AT/dmmpmm(Papatsenko)/fly(0.843)",{"v":1E-13,"d":"1.00E-13"},"Novel","K2 specific"]
["CTCTCGGCCCTC","PB0140.1_Irf6_2/Jaspar(0.623)",{"v":1E-13,"d":"1.00E-13"},"Novel","K2 specific"]
["ACGTTTCCCT","PCBP3(KH)/Mus_musculus-RNCMPT00215-PBM/HughesRNA(0.790)",{"v":1E-13,"d":"1.00E-13"},"Novel","K2 specific"]
["AGTTGGAGCC","Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA(0.679)",{"v":1E-13,"d":"1.00E-13"},"Novel","K2 specific"]
["GCAAAATGAAGA","skn-1/MA0547.1/Jaspar(0.685)",{"v":1E-13,"d":"1.00E-13"},"Novel","K2 specific"]
["GGAACTTGAT","SNRNP70(RRM)/Homo_sapiens-RNCMPT00070-PBM/HughesRNA(0.771)",{"v":1e-12,"d":"1.00E-12"},"Novel","K2 specific"]
["ACGAAGGTAT","RBM5(Znf)/Homo_sapiens-RNCMPT00055-PBM/HughesRNA(0.675)",{"v":1e-12,"d":"1.00E-12"},"Novel","K2 specific"]
["CAATCCTGTT","GRHL2/MA1105.2/Jaspar(0.740)",{"v":1e-12,"d":"1.00E-12"},"Novel","K2 specific"]
["AAGGTGAAAACC","PABPC3(RRM)/Homo_sapiens-RNCMPT00153-PBM/HughesRNA(0.788)",{"v":1e-18,"d":"1.00E-18"},"Novel","K2 specific"]
["CCACCATTKATA","POL012.1_TATA-Box/Jaspar(0.627)",{"v":1e-12,"d":"1.00E-12"},"Novel","K2 specific"]
["AATAGCTATGAA","br-Z2/dmmpmm(Bergman)/fly(0.611)",{"v":1e-12,"d":"1.00E-12"},"Novel","K2 specific"]
["TGATCCCTCATA","HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer(0.730)",{"v":1e-11,"d":"1.00E-11"},"Novel","K2 specific"]
["GATGHTGACTTT","WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer(0.792)",{"v":1E-10,"d":"1.00E-10"},"Novel","K2 specific"]
["TGGTCTTTTTCA","pan/dmmpmm(Down)/fly(0.715)",{"v":1E-10,"d":"1.00E-10"},"Novel","K2 specific"]
["AGGATTCTCTTT","Stat2/MA1623.1/Jaspar(0.667)",{"v":1E-10,"d":"1.00E-10"},"Novel","K2 specific"]
["AACATTGCAA","PB0146.1_Mafk_2/Jaspar(0.747)",{"v":1E-10,"d":"1.00E-10"},"Novel","K2 specific"]
["AGCACACAARMA","PB0208.1_Zscan4_2/Jaspar(0.773)",{"v":1E-10,"d":"1.00E-10"},"Novel","K2 specific"]
["CGTMGGGTKT","MUB(KH)/Drosophila_melanogaster-RNCMPT00137-PBM/HughesRNA(0.788)",{"v":1E-10,"d":"1.00E-10"},"Novel","K2 specific"]
["CACCGATGAA","RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA(0.699)",{"v":1e-17,"d":"1.00E-17"},"Novel","K2 specific"]
["GGCAAACTTTTT","SFP1/SacCer-Promoters/Homer(0.765)",{"v":1e-16,"d":"1.00E-16"},"Novel","K2 specific"]
["TCCTTTGCTACA","PB0082.1_Tcf3_1/Jaspar(0.622)",{"v":1e-15,"d":"1.00E-15"},"Novel","K2 specific"]
["GTGGAGATAC","ARR18/MA0948.1/Jaspar(0.723)",{"v":1e-15,"d":"1.00E-15"},"Novel","K2 specific"]
["TAGTGGAGTA","ZNF354C/MA0130.1/Jaspar(0.685)",{"v":1E-14,"d":"1.00E-14"},"Novel","K2 specific"]
["GGGCGCTTTT","Dof3/MA0021.1/Jaspar(0.734)",{"v":1E-14,"d":"1.00E-14"},"Novel","K2 specific"]
["AAAAAGAGGTAT","At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer(0.736)",{"v":1E-14,"d":"1.00E-14"},"Novel","K2 specific"]
["CCAAGAAACCTT","NAC078/MA1677.1/Jaspar(0.737)",{"v":1E-14,"d":"1.00E-14"},"Novel","K2 specific"]
["CCRCCGACAWTN","At5g65130(AP2EREBP)/colamp-At5g65130-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","A2 specific"]
["NATTTCCNGGAAAT","STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","A2 specific"]
["CAAGATGGCGGC","YY1(Zf)/Promoter/Homer",{"v":0.01,"d":"1.00E-02"},"Known","A2 specific"]
["AAAAAAAA","REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","A2 specific"]
["GGAAGTGAAAST","PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","A2 specific"]
["CTGCCWVCTTTTRTA","ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","A2 specific"]
["TGGTACATTCCA","PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer",{"v":0.01,"d":"1.00E-02"},"Known","A2 specific"]
["ACAGTATCCCTT","PB0033.1_Irf3_1/Jaspar(0.640)",1E-10,"Novel","A2 specific"]
["AAAAGTRM","CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer",0.01,"Known","D5 specific"]
["NHHACTTTWT","OBP1(C2C2dof)/col-OBP1-DAP-Seq(GSE60143)/Homer",0.01,"Known","D5 specific"]
["WAABTAGGTCAV","RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer",0.01,"Known","D5 specific"]
["YHACTTTTTS","AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer",0.01,"Known","D5 specific"]
["TAGCGCGC","DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer",0.01,"Known","Conserved"]
["WWWTWACTTTTT","At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer",0.01,"Known","Conserved"]
["ACATGCCCGGGCAT","p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer",0.01,"Known","Conserved"]
["NTNATGCAAYMNNHTGMAAY","CEBCEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer",0.01,"Known","Conserved"]
["RACAGCTGTTBH","HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer",0.01,"Known","Conserved"]
["NNHACTTTWT","AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer",0.01,"Known","Conserved"]
["TTCAAAWTAAAAGTC","MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer",0.01,"Known","Conserved"]
["MCTCCCMCRCAB","WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer",0.01,"Known","Conserved"]
["KATGATCA","GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer",0.01,"Known","Conserved"]
["HDNHDTCKCCGGMGA","AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer",0.01,"Known","Conserved"]
["YYYAACYRHH","ATY13(MYB)/col-ATY13-DAP-Seq(GSE60143)/Homer",0.01,"Known","Conserved"]
["AAGGTGATGTGT","bZIP911(2)(bZIP)/Antirrhinum majus/AthaMap(0.674)",1e-11,"Novel","Conserved"]
["TTCTTTAGAGAT","RLM1(MacIsaac)/Yeast(0.673)",1E-10,"Novel","Conserved"]