{"text_format":"3","workbook":"xlsx","n_sheets":2,"sheets":["Induced by PrrAB","Repressed by PrrAB"],"read":"whole","date_system":"1900"}

{"sheet":"Induced by PrrAB","index":0,"n_rows":13,"n_cols":13,"rows_kept":13}
["Category","Term","Count","%","PValue","Genes","List Total","Pop Hits","Pop Total","Fold Enrichment","Bonferroni","Benjamini","FDR"]
["GOTERM_BP_5","GO:0006873~cellular ion homeostasis",3,{"v":1.20481927710843,"d":"1.205"},0.0236863611106278,"4532688, 4537312, 4532622",65,7,1784,{"v":11.7626373626373,"d":"11.76"},0.986631454961556,0.986631454961556,25.5667347056067]
["GOTERM_BP_5","GO:0055082~cellular chemical homeostasis",3,{"v":1.20481927710843,"d":"1.205"},0.0236863611106278,"4532688, 4537312, 4532622",65,7,1784,{"v":11.7626373626373,"d":"11.76"},0.986631454961556,0.986631454961556,25.5667347056067]
["GOTERM_BP_5","GO:0050801~ion homeostasis",3,{"v":1.20481927710843,"d":"1.205"},0.0387696425896556,"4532688, 4537312, 4532622",65,9,1784,{"v":9.14871794871795,"d":"9.15"},0.999189139641516,0.971524390112175,38.5562448176161]
["GOTERM_BP_5","GO:0046364~monosaccharide biosynthetic process",3,{"v":1.20481927710843,"d":"1.205"},0.0565681782889038,"4532802, 4533162, 4534481",65,11,1784,{"v":7.48531468531468,"d":"7.49"},0.999971952526685,0.969616958430189,51.1912973887052]
["GOTERM_MF_3","GO:0004096~catalase activity",4,{"v":1.60642570281124,"d":"1.606"},0.00649539312274011,"4531149, 4534109, 4536096, 4537344",133,11,3582,{"v":9.79357484620642,"d":"9.79"},0.362144824361313,0.362144824361313,6.50314807724407]
["GOTERM_MF_3","GO:0016722~oxidoreductase activity, oxidizing metal ions",3,{"v":1.20481927710843,"d":"1.205"},0.0125279515819434,"4532688, 4537312, 4532622",133,5,3582,{"v":16.1593984962406,"d":"16.16"},0.581001974916745,0.352699432193008,12.1982140429897]
["GOTERM_MF_3","GO:0016705~oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen",13,{"v":5.22088353413654,"d":"5.221"},0.0241777449927037,"4531373, 4533884, 4531417, 4533038, 4531773, 4531933, 4536609, 4536200, 4531905, 4535111, 4534037, 4536652, 4533662",133,173,3582,{"v":2.0238167673519,"d":"2.02"},0.815252069316848,0.430456988134458,22.3180742075394]
["GOTERM_MF_3","GO:0051536~iron-sulfur cluster binding",9,{"v":3.6144578313253,"d":"3.614"},0.0598222125714444,"4534013, 4536230, 4532525, 4534630, 4534481, 4533521, 4536484, 4534895, 4537735",133,115,3582,{"v":2.10774762994442,"d":"2.11"},0.985826109963494,0.654957759834935,47.0869534479193]
["GOTERM_MF_3","GO:0016684~oxidoreductase activity, acting on peroxide as acceptor",5,{"v":2.00803212851405,"d":"2.008"},0.0718929928465109,"4531149, 4534109, 4532347, 4536096, 4537344",133,43,3582,{"v":3.13166637524042,"d":"3.13"},0.994188803523655,0.642847979128697,53.6921006598041]
["KEGG_PATHWAY","msm00190:Oxidative phosphorylation",6,{"v":2.40963855421686,"d":"2.410"},0.0174974789990289,"4532360, 4533165, 4535511, 4536091, 4532726, 4537735",52,48,1573,{"v":3.78125,"d":"3.78"},0.693552475056906,0.693552475056906,16.5604778624675]
["KEGG_PATHWAY","msm00625:Chloroalkane and chloroalkene degradation",4,{"v":1.60642570281124,"d":"1.606"},0.0648684593430179,"4536066, 4537739, 4532907, 4532965",52,29,1573,{"v":4.17241379310344,"d":"4.17"},0.988819241670057,0.894260894982307,49.7354785528292]
["KEGG_PATHWAY","msm03018:RNA degradation",3,{"v":1.20481927710843,"d":"1.205"},0.0926116775379116,"4532040, 4530985, 4532726",52,16,1573,{"v":5.671875,"d":"5.67"},0.99851357345467,0.885874905316415,63.0925536580795]

{"sheet":"Repressed by PrrAB","index":1,"n_rows":27,"n_cols":13,"rows_kept":27}
["Category","Term","Count","%","PValue","Genes","List Total","Pop Hits","Pop Total","Fold Enrichment","Bonferroni","Benjamini","FDR"]
["GOTERM_BP_3","GO:1901564~organonitrogen compound metabolic process",68,{"v":16.1904761904761,"d":"16.190"},{"v":7.0450894984953e-07,"d":"7.05E-07"},"4530828, 4535223, 4536818, 4534444, 4531292, 4536887, 4535790, 4536223, 4536396, 4532486, 4534682, 4535694, 4534609, 4537412, 4534913, 4532947, 4532080, 4532649, 4537513, 4531258, 4532868, 4534511, 4536133, 4534102, 4532694, 4533091, 4531470, 4537673, 4533234, 4532952, 4534451, 4533235, 4536899, 4536683, 4537630, 4537269, 4537529, 4535809, 4535014, 4534375, 4533495, 4534724, 4535783, 4535341, 4533252, 4537239, 4534475, 4537539, 4530997, 4534175, 4535043, 4532880, 4533720, 4532741, 4536215, 4533415, 4531281, 4533765, 4531280, 4531705, 4536259, 4537247, 4537548, 4532985, 4530882, 4537728, 4534875, 4531413",167,487,2033,{"v":1.69981187522286,"d":"1.70"},{"v":7.74930090429171e-05,"d":"7.75E-05"},{"v":7.74930090429171e-05,"d":"7.75E-05"},{"v":0.000795968892663978,"d":"7.96E-04"}]
["GOTERM_BP_3","GO:0044281~small molecule metabolic process",68,{"v":16.1904761904761,"d":"16.190"},{"v":1.23343839536582E-5,"d":"1.23E-05"},"4530828, 4532403, 4535223, 4534306, 4536818, 4531292, 4535790, 4536223, 4536396, 4537556, 4533025, 4534682, 4535694, 4537412, 4532947, 4534913, 4532080, 4532649, 4535886, 4532868, 4534511, 4533152, 4532103, 4536133, 4532694, 4532653, 4531869, 4531470, 4537673, 4532952, 4534451, 4533235, 4536899, 4536683, 4537630, 4535210, 4537269, 4537529, 4535809, 4537463, 4534375, 4534724, 4535783, 4535341, 4535810, 4534475, 4530997, 4536674, 4534175, 4535575, 4535043, 4532700, 4532880, 4533720, 4532741, 4536215, 4533415, 4531281, 4533765, 4531280, 4533410, 4531705, 4537548, 4532985, 4533264, 4533179, 4537728, 4531413",167,524,2033,{"v":1.57978699090368,"d":"1.58"},1.35587057827768E-3,{"v":0.000678165243187423,"d":"6.78E-04"},0.0139348095378855]
["GOTERM_BP_3","GO:1901135~carbohydrate derivative metabolic process",28,{"v":6.66666666666666,"d":"6.667"},{"v":0.00019299625458743,"d":"1.93E-04"},"4533117, 4533495, 4534724, 4535783, 4533585, 4536396, 4534475, 4537539, 4532947, 4532080, 4535043, 4535575, 4532868, 4531281, 4531344, 4531280, 4532694, 4537673, 4534451, 4533235, 4537247, 4536899, 4532985, 4537529, 4537728, 4530882, 4535809, 4531413",167,164,2033,{"v":2.07842850883598,"d":"2.08"},0.021007832391696,0.00705222780257408,0.217835419093881]
["GOTERM_BP_3","GO:0044711~single-organism biosynthetic process",51,{"v":12.1428571428571,"d":"12.143"},{"v":0.00032703377908027,"d":"3.27E-04"},"4532403, 4530828, 4534306, 4535223, 4531292, 4535694, 4533939, 4537412, 4532947, 4534913, 4532080, 4532649, 4534511, 4532868, 4533152, 4532103, 4534102, 4532694, 4532653, 4531869, 4531470, 4537673, 4533234, 4534451, 4533235, 4536899, 4536683, 4537630, 4537529, 4537269, 4535210, 4535809, 4534375, 4534724, 4535783, 4537239, 4534475, 4536674, 4534175, 4535043, 4532700, 4533720, 4532741, 4533415, 4531281, 4533765, 4531280, 4531705, 4532985, 4537728, 4531413",167,393,2033,{"v":1.57978699090368,"d":"1.58"},0.0353400269709143,0.00895456673281103,0.36886934951773]
["GOTERM_BP_3","GO:0055086~nucleobase-containing small molecule metabolic process",22,{"v":5.23809523809523,"d":"5.238"},{"v":0.000812383116252124,"d":"8.12E-04"},"4532868, 4534375, 4533152, 4534724, 4531281, 4531280, 4535783, 4532694, 4537673, 4533235, 4536396, 4536899, 4534475, 4532985, 4534682, 4537529, 4537728, 4532947, 4532080, 4535809, 4531413, 4535043",167,125,2033,{"v":2.14256287425149,"d":"2.14"},0.0855188837317955,0.0177207988231574,0.914020928144077]
["GOTERM_BP_3","GO:0019637~organophosphate metabolic process",26,{"v":6.19047619047619,"d":"6.190"},1.14293250930417E-3,"4532403, 4534375, 4534724, 4535783, 4533585, 4536396, 4534475, 4533939, 4534682, 4532947, 4535043, 4535575, 4532868, 4533152, 4531281, 4531280, 4537673, 4534451, 4536259, 4533235, 4536899, 4532985, 4537529, 4537728, 4535809, 4531413",167,164,2033,{"v":1.92996932963341,"d":"1.93"},0.118203942488436,0.0207474928567142,1.28374099515832]
["GOTERM_BP_3","GO:0044249~cellular biosynthetic process",107,{"v":25.4761904761904,"d":"25.476"},0.00123897177713246,"4530828, 4532403, 4533117, 4534306, 4533114, 4537552, 4534444, 4533445, 4536887, 4532486, 4534609, 4533939, 4537412, 4532947, 4532080, 4531448, 4531258, 4532103, 4534102, 4532694, 4532961, 4532952, 4533234, 4534451, 4533235, 4536899, 4536683, 4531060, 4537630, 4531064, 4535809, 4533082, 4536004, 4533495, 4535783, 4537239, 4537539, 4532998, 4536624, 4535043, 4531753, 4532880, 4536215, 4533415, 4535770, 4533765, 4533827, 4531705, 4537545, 4535924, 4537247, 4532985, 4534872, 4532570, 4534875, 4531708, 4535223, 4531212, 4535421, 4531292, 4530875, 4535790, 4535694, 4534913, 4533373, 4532649, 4537513, 4532868, 4534511, 4533152, 4531090, 4531324, 4533576, 4531470, 4532653, 4531869, 4537673, 4535610, 4531721, 4533155, 4535210, 4537269, 4537529, 4535014, 4535544, 4534375, 4535207, 4534724, 4535341, 4533252, 4534475, 4534376, 4536674, 4534175, 4536725, 4532700, 4533720, 4532741, 4533268, 4531281, 4531280, 4536525, 4536259, 4537728, 4535732, 4530882, 4531413",167,1065,2033,{"v":1.22308059936465,"d":"1.22"},0.127481475047559,0.0192930870222786,1.39092508814636]
["GOTERM_BP_3","GO:0006793~phosphorus metabolic process",27,{"v":6.42857142857142,"d":"6.429"},0.0017350104046773,"4532403, 4534375, 4534724, 4535783, 4533585, 4536396, 4534475, 4534682, 4533939, 4532947, 4535043, 4535575, 4532868, 4533152, 4531281, 4531280, 4533765, 4537673, 4534451, 4536259, 4533235, 4536899, 4532985, 4537529, 4537728, 4535809, 4531413",167,178,2033,{"v":1.84656529637354,"d":"1.85"},0.173881373890957,0.0235943096367549,1.94283933409316]
["GOTERM_BP_3","GO:1901576~organic substance biosynthetic process",105,{"v":25,"d":"25.000"},0.00776757182923041,"4530828, 4532403, 4533117, 4534306, 4533114, 4537552, 4534444, 4533445, 4536887, 4532486, 4534609, 4533939, 4537412, 4532947, 4532080, 4531448, 4531258, 4532103, 4534102, 4532694, 4532961, 4532952, 4533234, 4534451, 4533235, 4536899, 4536683, 4531060, 4537630, 4531064, 4535809, 4536004, 4533495, 4535783, 4537239, 4537539, 4532998, 4536624, 4535043, 4531753, 4532880, 4536215, 4533415, 4535770, 4533765, 4533827, 4531705, 4537545, 4537247, 4532985, 4534872, 4532570, 4534875, 4531708, 4535223, 4531212, 4535421, 4531292, 4530875, 4535790, 4535694, 4534913, 4533373, 4532649, 4537513, 4532868, 4534511, 4533152, 4531090, 4531324, 4533576, 4531470, 4532653, 4531869, 4537673, 4535610, 4531721, 4533155, 4537269, 4537529, 4535210, 4535014, 4535544, 4534375, 4535207, 4534724, 4535341, 4533252, 4534475, 4534376, 4536674, 4534175, 4536725, 4532700, 4533720, 4532741, 4533268, 4531281, 4531280, 4536525, 4536259, 4537728, 4535732, 4530882, 4531413",167,1086,2033,{"v":1.17701061964468,"d":"1.18"},0.575892628244359,0.0909067679058358,8.433305704049]
["GOTERM_BP_3","GO:0019538~protein metabolic process",21,{"v":5,"d":"5.000"},0.0124473652285482,"4533117, 4533606, 4532880, 4536215, 4534724, 4534444, 4534102, 4535341, 4536887, 4535790, 4532952, 4536259, 4533252, 4532486, 4531404, 4534609, 4532570, 4535210, 4534875, 4535014, 4537151",167,146,2033,{"v":1.75100483963579,"d":"1.75"},0.74786814274068,0.128709914272268,13.1958735634461]
["GOTERM_BP_3","GO:0051128~regulation of cellular component organization",6,{"v":1.42857142857142,"d":"1.429"},0.0193108189577692,"4536887, 4536004, 4537247, 4533495, 4537539, 4530882",167,20,2033,{"v":3.65209580838323,"d":"3.65"},0.882928209336126,0.177162943522527,19.7732005774634]
["GOTERM_BP_3","GO:0051186~cofactor metabolic process",16,{"v":3.8095238095238,"d":"3.810"},0.0521990876034384,"4533082, 4534375, 4534306, 4534724, 4533765, 4531344, 4534102, 4531869, 4533234, 4536396, 4535924, 4536259, 4537239, 4537529, 4535210, 4531258",167,118,2033,{"v":1.65066477215061,"d":"1.65"},0.997252843076972,0.388250501040931,45.4312201489479]
["GOTERM_BP_3","GO:0006790~sulfur compound metabolic process",8,{"v":1.9047619047619,"d":"1.905"},0.0621432286441918,"4530828, 4533091, 4534451, 4533082, 4533861, 4531344, 4531292, 4537513",167,44,2033,{"v":2.21339139902014,"d":"2.21"},0.999138972501307,0.418925150234637,51.5614163051598]
["GOTERM_BP_3","GO:0042440~pigment metabolic process",4,{"v":0.952380952380952,"d":"0.952"},0.0679772293261277,"4533234, 4537239, 4537728, 4534102",167,12,2033,{"v":4.05788423153692,"d":"4.06"},0.999566571442637,0.424851723089408,54.8587862805288]
["GOTERM_MF_3","GO:0001882~nucleoside binding",50,{"v":11.9047619047619,"d":"11.905"},{"v":0.0008498993368499,"d":"8.50E-04"},"4530828, 4531211, 4532773, 4537216, 4536887, 4532549, 4535790, 4531404, 4532486, 4535068, 4534682, 4532947, 4533200, 4533937, 4532099, 4536642, 4532101, 4533606, 4532293, 4535212, 4536847, 4534101, 4536891, 4537673, 4532952, 4533235, 4532916, 4532911, 4536899, 4531721, 4537529, 4533338, 4534375, 4535346, 4535341, 4535810, 4530890, 4535575, 4532880, 4536215, 4537246, 4531281, 4532222, 4531280, 4535301, 4537247, 4532985, 4532570, 4537728, 4531413",268,425,3582,{"v":1.57243195785777,"d":"1.57"},0.0657590116087615,0.0657590116087615,0.899852947484114]
["GOTERM_MF_3","GO:0032553~ribonucleotide binding",52,{"v":12.3809523809523,"d":"12.381"},0.0036036474597313,"4530828, 4531211, 4532773, 4536887, 4537216, 4532549, 4535790, 4531404, 4532486, 4534682, 4535068, 4532947, 4533200, 4533937, 4532099, 4536642, 4532101, 4533606, 4532293, 4535212, 4536847, 4534101, 4536891, 4535755, 4537673, 4532952, 4533235, 4532916, 4532911, 4536899, 4531721, 4537529, 4533338, 4534375, 4535346, 4535341, 4535810, 4530890, 4535575, 4532880, 4536215, 4537062, 4537246, 4531281, 4532222, 4531280, 4535301, 4537247, 4532985, 4532570, 4537728, 4531413",268,477,3582,{"v":1.45705435088707,"d":"1.46"},0.250847340972923,0.134463947009094,3.76529764660329]
["GOTERM_MF_3","GO:1901682~sulfur compound transmembrane transporter activity",5,{"v":1.19047619047619,"d":"1.190"},0.0331284866645134,"4532099, 4537329, 4535623, 4533200, 4535842",268,17,3582,{"v":3.93107989464442,"d":"3.93"},0.932469308953924,0.592775656997387,30.1038999370201]
["GOTERM_MF_3","GO:1901265~nucleoside phosphate binding",64,{"v":15.2380952380952,"d":"15.238"},0.0652801374306172,"4530828, 4531211, 4534501, 4532773, 4536887, 4537216, 4532549, 4535790, 4533025, 4533772, 4532486, 4537741, 4531404, 4534682, 4535068, 4532947, 4533200, 4533937, 4536597, 4532099, 4536642, 4535886, 4533606, 4532101, 4532293, 4535212, 4536173, 4536847, 4536891, 4534101, 4535755, 4537673, 4532952, 4533235, 4532916, 4532911, 4536899, 4531721, 4537529, 4533338, 4535049, 4534375, 4535346, 4535341, 4535810, 4530890, 4535575, 4535532, 4532880, 4533720, 4536215, 4537062, 4537246, 4531281, 4532222, 4531280, 4535301, 4530941, 4537247, 4532985, 4532570, 4537728, 4535371, 4531413",268,710,3582,{"v":1.20479293672482,"d":"1.20"},0.995486455639693,0.740803323369649,51.2123473923186]
["GOTERM_MF_3","GO:0000166~nucleotide binding",64,{"v":15.2380952380952,"d":"15.238"},0.0652801374306172,"4530828, 4531211, 4534501, 4532773, 4536887, 4537216, 4532549, 4535790, 4533025, 4533772, 4532486, 4537741, 4531404, 4534682, 4535068, 4532947, 4533200, 4533937, 4536597, 4532099, 4536642, 4535886, 4533606, 4532101, 4532293, 4535212, 4536173, 4536847, 4536891, 4534101, 4535755, 4537673, 4532952, 4533235, 4532916, 4532911, 4536899, 4531721, 4537529, 4533338, 4535049, 4534375, 4535346, 4535341, 4535810, 4530890, 4535575, 4535532, 4532880, 4533720, 4536215, 4537062, 4537246, 4531281, 4532222, 4531280, 4535301, 4530941, 4537247, 4532985, 4532570, 4537728, 4535371, 4531413",268,710,3582,{"v":1.20479293672482,"d":"1.20"},0.995486455639693,0.740803323369649,51.2123473923186]
["GOTERM_MF_3","GO:0016875~ligase activity, forming carbon-oxygen bonds",5,{"v":1.19047619047619,"d":"1.190"},0.076140461046507,"4535341, 4535790, 4532952, 4532880, 4536215",268,22,3582,{"v":3.0376526458616,"d":"3.04"},0.998227950763286,0.718359467394221,56.9125100871078]
["GOTERM_MF_3","GO:0017171~serine hydrolase activity",6,{"v":1.42857142857142,"d":"1.429"},0.076336881320466,"4533606, 4535475, 4531404, 4531324, 4531254, 4532927",268,31,3582,{"v":2.58690418873375,"d":"2.59"},0.998257839238923,0.653118314068708,57.0097999890509]
["KEGG_PATHWAY","msm00640:Propanoate metabolism",15,{"v":3.57142857142857,"d":"3.571"},0.0126952124001426,"4535218, 4536499, 4536666, 4535294, 4534455, 4533410, 4536218, 4534545, 4535810, 4533853, 4536223, 4535301, 4535040, 4536597, 4530890",147,80,1573,{"v":2.0063775510204,"d":"2.01"},0.699103704868893,0.699103704868893,13.0777912420601]
["KEGG_PATHWAY","msm01110:Biosynthesis of secondary metabolites",46,{"v":10.9523809523809,"d":"10.952"},0.0536406021890606,"4536499, 4535223, 4534306, 4533585, 4535810, 4533853, 4536396, 4533025, 4537239, 4534475, 4533366, 4535694, 4533939, 4537412, 4536025, 4532947, 4535040, 4536597, 4532649, 4530890, 4531258, 4534175, 4535043, 4534511, 4533720, 4532741, 4533415, 4531281, 4531280, 4534102, 4534455, 4531869, 4531470, 4535301, 4534451, 4533234, 4535822, 4533235, 4536899, 4537548, 4533264, 4536683, 4537630, 4537728, 4531410, 4531413",147,392,1573,{"v":1.25569207274746,"d":"1.26"},0.994385988104813,0.925073289841428,45.3817129624104]
["KEGG_PATHWAY","msm00280:Valine, leucine and isoleucine degradation",13,{"v":3.09523809523809,"d":"3.095"},0.0601827300397497,"4535218, 4536499, 4536666, 4532175, 4534455, 4533410, 4536218, 4534545, 4533853, 4536223, 4535301, 4535040, 4536597",147,80,1573,{"v":1.73886054421768,"d":"1.74"},0.997075298134399,0.856991933791578,49.3838237121772]
["KEGG_PATHWAY","msm01130:Biosynthesis of antibiotics",36,{"v":8.57142857142857,"d":"8.571"},0.0760819462142813,"4532403, 4536499, 4535223, 4535810, 4533853, 4536396, 4533025, 4534475, 4535479, 4530997, 4537412, 4532947, 4535040, 4536597, 4532649, 4530890, 4535043, 4534175, 4534511, 4533720, 4532741, 4533415, 4531281, 4531280, 4534455, 4536218, 4531470, 4535301, 4534451, 4535822, 4533235, 4536899, 4533264, 4537548, 4537728, 4531413",147,301,1573,{"v":1.27981558071733,"d":"1.28"},0.999411773440689,0.844265025025529,58.0238297479981]
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