Version=3.21301
EndTime=1.000000e+002
Points=20
OutputTimeZero=1
RealTime=0
SleepTime=1
TimeUnit=s
ConcentrationUnit=mM
VolumeUnit=ml
TimeElasticities=0
Dynamics=1
SteadyState=0
Report=0
DynTitles=1
SSTitles=0
DynQuotes=0
SSQuotes=0
DynColWidth=12
SSColWidth=12
DynSeparator=32
SSSeparator=32
SSMCAUnscaled=0
SSStrategy=0
SSBackIntegration=1
RepStructuralAnalysis=1
RepStabilityAnalysis=1
RepMCA=1
NewtonLimit=50
SSResoltion=1.000000e-009
RelativeTolerance=1.000000e-006
AbsoluteTolerance=1.000000e-012
AdamsMaxOrder=12
BDFMaxOrder=5
DerivationFactor=1.000000e-003
ReportFile=kimetic_model.txt
DynamicsFile=simresults.dyn
SSFile=simresults.ss
Title=
TotalMetabolites=6
TotalSteps=5
TotalMoieties=2
TotalCompartments=1
TotalUDKinetics=0
Metabolite=Pd(0)
Concentration=0
Compartment=0
Type=1
Metabolite=Pdblack
Concentration=0
Compartment=0
Type=1
Metabolite=Pd(II)
Concentration=2
Compartment=0
Type=1
Metabolite=S
Concentration=10
Compartment=0
Type=1
Metabolite=P
Concentration=0
Compartment=0
Type=2
Metabolite=Pd(0)n
Concentration=0
Compartment=0
Type=2
Metabolite=  S + P 
Concentration=10
Compartment=0
Type=7
Metabolite=  Pd(0) + Pdblack + Pd(II) + Pd(0)n 
Concentration=2
Compartment=0
Type=7
Step=R1
Equation=Pd(II) -> Pd(0)
KineticType=Mass action (irreversible)
Flux=0
Reversible=0
Substrates=1
Products=1
Modifiers=0
Constants=1
Subs0=2
Prod0=0
Param0=3
Step=R2
Equation=S + Pd(0) -> P + Pd(0)
KineticType=Constant flux (irreversible)
Flux=0
Reversible=0
Substrates=2
Products=2
Modifiers=0
Constants=1
Subs0=3
Subs1=0
Prod0=4
Prod1=0
Param0=0.5
Step=R3
Equation=Pd(0) -> Pd(0)n
KineticType=Mass action (irreversible)
Flux=0
Reversible=0
Substrates=1
Products=1
Modifiers=0
Constants=1
Subs0=0
Prod0=5
Param0=1e-007
Step=R4
Equation=Pd(0) + Pd(0)n -> Pd(0)n + Pd(0)n
KineticType=Mass action (irreversible)
Flux=0
Reversible=0
Substrates=2
Products=2
Modifiers=0
Constants=1
Subs0=0
Subs1=5
Prod0=5
Prod1=5
Param0=100
Step=R5
Equation=Pd(0)n -> Pdblack
KineticType=Mass action (irreversible)
Flux=0
Reversible=0
Substrates=1
Products=1
Modifiers=0
Constants=1
Subs0=5
Prod0=1
Param0=10
Compartment=compartment
Volume=1.000000e+000
Comments

EndComments
PlotType=2
PlotDyn=0
Plot3d=0
PlotGrid=0
PlotKey=1
PlotTitles=1
PlotMultiplot=1
PlotContour=0
PlotHidden3d=0
PlotLogX=0
PlotLogY=0
PlotLogZ=0
PlotXEntry=0
PlotYTotal=4
PlotZTotal=1
PlotY0=1
PlotY1=2
PlotY2=3
PlotY3=4
PlotZ0=-1
User-defined functions
Items=0
Interactive time course
Items=3
Title=[Pd(0)]t
Type=3
I=Pd(0)
Title=R1(k)
Type=6
I=R1
J=k
Title=[Pd(II)]i
Type=1
I=Pd(II)
Time-course output
Items=5
Title=time
Type=14
Title=[Pd(II)]t
Type=3
I=Pd(II)
Title=[Pd(0)]t
Type=3
I=Pd(0)
Title=[P]t
Type=3
I=P
Title=R1(k)
Type=6
I=R1
J=k
Steady-state output
Items=4
Title=[Pd(0)]ss
Type=2
I=Pd(0)
Title=[Pd(II)]ss
Type=2
I=Pd(II)
Title=real time
Type=23
Title=R3(k)
Type=6
I=R3
J=k
Scan
Enabled=1
Dimension=2
Title=R1(k)
Type=6
I=R1
J=k
Min=3.0000000000000000
Max=10.0000000000000000
Density=10
Log=0
Independent=1
Grid=0
Title=[Pd(II)]i
Type=1
I=Pd(II)
Min=1.0000000000000000
Max=10.0000000000000000
Density=10
Log=0
Independent=1
Grid=0
Parameter Links
Items=0
Optimisation
Enabled=0
SetModel=0
Sign=1.0
OptimiseDyn=1
Constrained=0
Method=Evolutionary programming
P0=500
P1=10
P2=1
P3=1
P4=1
Title=
Type=0
Parameters=0
Fitting
Enabled=0
SetModel=0
FitDyn=1
Constrained=0
FitDataFile=
FitSeparator=32
FitLines=0
Method=Evolutionary programming
P0=500
P1=10
P2=1
P3=1
P4=1
Parameters=0
AdjConcentrations=0
FitXItems=0
FitYItems=0