{"text_format":"3","workbook":"xls","n_sheets":1,"sheets":["Table_S4_All_DEG"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"Table_S4_All_DEG","index":0,"n_rows":14505,"n_cols":84,"rows_kept":1125,"cut":true,"bounds":{"rows_first":500,"rows_last":125,"rows_between":500,"halvings":2},"flags":["formulas_cached_only"]}
["ID","CK-1_fpkm","CK-2_fpkm","CK-3_fpkm","Treat-5dpi-1_fpkm","Treat-5dpi-2_fpkm","Treat-5dpi-3_fpkm","Treat-8dpi-1_fpkm","Treat-8dpi-2_fpkm","Treat-8dpi-3_fpkm","Treat-1dpi-1_fpkm","Treat-1dpi-2_fpkm","Treat-1dpi-3_fpkm","Treat-2dpi-1_fpkm","Treat-2dpi-2_fpkm","Treat-2dpi-3_fpkm","CK-1_count","CK-2_count","CK-3_count","Treat-5dpi-1_count","Treat-5dpi-2_count","Treat-5dpi-3_count","Treat-8dpi-1_count","Treat-8dpi-2_count","Treat-8dpi-3_count","Treat-1dpi-1_count","Treat-1dpi-2_count","Treat-1dpi-3_count","Treat-2dpi-1_count","Treat-2dpi-2_count","Treat-2dpi-3_count","Treat-1dpi_vs_CK.log2FoldChange","Treat-1dpi_vs_CK.pvalue","Treat-1dpi_vs_CK.padj","Treat-1dpi_vs_CK.regulated","Treat-2dpi_vs_CK.log2FoldChange","Treat-2dpi_vs_CK.pvalue","Treat-2dpi_vs_CK.padj","Treat-2dpi_vs_CK.regulated","Treat-5dpi_vs_CK.log2FoldChange","Treat-5dpi_vs_CK.pvalue","Treat-5dpi_vs_CK.padj","Treat-5dpi_vs_CK.regulated","Treat-8dpi_vs_CK.log2FoldChange","Treat-8dpi_vs_CK.pvalue","Treat-8dpi_vs_CK.padj","Treat-8dpi_vs_CK.regulated","Treat-8dpi_vs_Treat-1dpi.log2FoldChange","Treat-8dpi_vs_Treat-1dpi.pvalue","Treat-8dpi_vs_Treat-1dpi.padj","Treat-8dpi_vs_Treat-1dpi.regulated","Treat-8dpi_vs_Treat-2dpi.log2FoldChange","Treat-8dpi_vs_Treat-2dpi.pvalue","Treat-8dpi_vs_Treat-2dpi.padj","Treat-8dpi_vs_Treat-2dpi.regulated","Treat-8dpi_vs_Treat-5dpi.log2FoldChange","Treat-8dpi_vs_Treat-5dpi.pvalue","Treat-8dpi_vs_Treat-5dpi.padj","Treat-8dpi_vs_Treat-5dpi.regulated","Treat-5dpi_vs_Treat-1dpi.log2FoldChange","Treat-5dpi_vs_Treat-1dpi.pvalue","Treat-5dpi_vs_Treat-1dpi.padj","Treat-5dpi_vs_Treat-1dpi.regulated","Treat-5dpi_vs_Treat-2dpi.log2FoldChange","Treat-5dpi_vs_Treat-2dpi.pvalue","Treat-5dpi_vs_Treat-2dpi.padj","Treat-5dpi_vs_Treat-2dpi.regulated","chr","start","end","strand","gene_name","gene_description","KEGG","KEGG pathway","NR","Swissprot","Tremble","KOG","GO","Pfam","TF-Family","TF-Category","TF-Classification"]
["MS01G00050",10.3709,11.3908,15.6547,27.8159,21.4851,27.6186,23.4361,20.078,20.6734,23.1313,26.6442,27.5362,20.9205,26.067,26.2677,211,231,312,414,382,472,362,290,380,382,464,567,334,415,419,1.236069477,"1.08593E-10","1.00692E-09","up",1.263921524,"1.72001E-10","1.08672E-09","up",1.254224125,"3.72344E-09","2.08275E-08","up",1.067737802,"2.43794E-07","9.99845E-07","up",-0.157518312,0.318276361,0.469806606,false,-0.182392869,0.29000749,0.485210234,false,-0.188798961,0.281204222,0.728914952,false,0.034179655,0.834167999,0.910327023,false,0.014547296,0.934204363,0.979396972,false,"chr_001",63331,64605,"+","MS01G00050","--","--","--","uncharacterized protein LOC103450315 [Malus domestica]","--","A0A498HW61_MALDO RecName: Full=SWIB/MDM2 domain-containing protein {ECO:0000259|Pfam:PF02201};","RNA polymerase I transcription factor UAF","--","PF02201.21:SWIB/MDM2 domain","--","--","--"]
["MS01G00090",2.6454,2.0295,4.1937,5.0626,4.2735,6.0392,4.5912,2.1481,3.4792,4.3709,6.8356,7.9336,4.7593,6.7214,6.4307,85,65,132,119,120,163,112,49,101,114,188,258,120,169,162,1.296457801,"6.7312E-05",0.000248891,"up",1.309974562,"7.88029E-06","2.69305E-05","up",1.008634909,0.001136169,0.002635049,"up",0.495593504,0.183957853,0.249486968,false,-0.790124879,0.020124705,0.054851502,false,-0.800629406,0.009214099,0.039890763,false,-0.51654568,0.099148089,0.526874896,false,-0.272434508,0.311354551,0.502011908,false,-0.27685012,0.229414022,0.514390702,false,"chr_001",96624,98317,"-","MS01G00090","--","K24028 salicylic acid 3-hydroxylase [EC:1.14.11.-] | (RefSeq) LOW QUALITY PROTEIN: protein DOWNY MILDEW RESISTANCE 6 (A)","--","flavanone 3-dioxygenase 2-like [Malus sylvestris]","FL3H2_ORYSJ RecName: Full=Flavanone 3-dioxygenase 2 {ECO:0000305}; EC=1.14.11.9 {ECO:0000269|PubMed:18413994}; AltName: Full=Flavanone 3-beta-hydroxylase 2 {ECO:0000305}; AltName: Full=Flavanone 3-hydroxylase 2 {ECO:0000303|PubMed:18413994}; Short=OsF3H-2 {ECO:0000303|PubMed:18413994};","A0A498HPC7_MALDO RecName: Full=Fe2OG dioxygenase domain-containing protein {ECO:0000259|PROSITE:PS51471};","Iron/ascorbate family oxidoreductases","GO:0051213,dioxygenase activity; GO:0031418,L-ascorbic acid binding; GO:0046872,metal ion binding; GO:0045486,naringenin 3-dioxygenase activity; GO:0009813,flavonoid biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005488,binding; GO:0019842,vitamin binding; GO:0030246,carbohydrate binding; GO:0031406,carboxylic acid binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0043177,organic acid binding; GO:0048029,monosaccharide binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016706,2-oxoglutarate-dependent dioxygenase activity; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process","PF03171.23:2OG-Fe(II) oxygenase superfamily","--","--","--"]
["MS01G00150",1.7319,1.8939,2.5636,0.805,0.6342,1.6082,0.5247,0.9514,0.8818,0.8108,1.3557,1.4888,0.8387,0.9075,0.4639,100,109,145,34,32,78,23,39,46,38,67,87,38,41,21,-0.571085897,0.055876767,0.09707886,false,-1.187314299,0.000328726,0.000848887,"down",-0.819627466,0.030020043,0.050825726,false,-1.107275145,0.000605783,0.001462116,"down",-0.520984686,0.17094737,0.297449679,false,0.095779301,0.819882634,0.901235835,false,-0.284560967,0.525235732,0.864658858,false,-0.230493266,0.587682654,0.74950793,false,0.390656531,0.39223909,0.674810852,false,"chr_001",156474,161671,"+","MS01G00150","--","K23280 rhamnogalacturonan I rhamnosyltransferase [EC:2.4.1.351] | (RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like (A)","--","O-fucosyltransferase 16-like [Malus domestica]","OFT16_ARATH RecName: Full=O-fucosyltransferase 16 {ECO:0000305}; Short=O-FucT-16 {ECO:0000305}; EC=2.4.1.- {ECO:0000305}; AltName: Full=O-fucosyltransferase family protein {ECO:0000305};","A0A540LJD0_MALBA RecName: Full=O-fucosyltransferase family protein {ECO:0000256|ARBA:ARBA00030350};","--","GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0000137,Golgi cis cisterna; GO:0016021,integral component of membrane; GO:0005802,trans-Golgi network; GO:0016757,glycosyltransferase activity; GO:0006004,fucose metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0005975,carbohydrate metabolic process; GO:0005996,monosaccharide metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019318,hexose metabolic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity; GO:0005795,Golgi stack; GO:0031984,organelle subcompartment; GO:0031985,Golgi cisterna; GO:0098791,Golgi apparatus subcompartment; GO:0016020,membrane; GO:0031224,intrinsic component of membrane","PF10250.12:GDP-fucose protein O-fucosyltransferase","--","--","--"]
["MS01G00160",7.8607,7.8104,6.2885,51.8153,38.9424,60.895,54.2835,39.3663,66.6987,21.5102,32.6944,34.9698,48.2568,62.253,36.5618,416,412,326,2006,1801,2707,2181,1479,3189,924,1481,1873,2004,2578,1517,2.198762541,"1.60551E-25","5.70245E-24","up",3.033699446,"1.11529E-42","6.20383E-41","up",2.991678225,"4.34604E-49","3.92276E-47","up",3.14116439,"8.87179E-48","5.06595E-46","up",0.956254314,"7.73352E-05",0.000459482,false,0.123919428,0.62110882,0.773436113,false,0.15025861,0.515364876,0.862077149,false,0.809030785,0.000351418,0.002624491,false,-0.017724587,0.941000824,0.981252054,false,"chr_001",161943,166214,"-","MS01G00160","--","K12890 serine/arginine-rich splicing factor 1 | (RefSeq) uncharacterized protein LOC103422586 isoform X1 (A)","ko03040: Spliceosome","uncharacterized protein LOC103428582 isoform X1 [Malus domestica]","--","A0A540LJT9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD86562.1};","--","--","--","--","--","--"]
["MS01G00220",10.0727,12.26,13.9106,2.6499,2.0225,2.2399,2.6785,2.4094,3.2606,1.9199,2.3314,2.6102,2.1555,2.5016,2.6422,530,643,717,102,93,99,107,90,155,82,105,139,89,103,109,-2.210670398,"4.3448E-29","2.05758E-27","down",-2.017873465,"2.9663E-26","6.92067E-25","down",-2.177147128,"3.16499E-25","7.99595E-24","down",-1.832217343,"3.57248E-20","4.90454E-19","down",0.391820466,0.091161412,0.183993966,false,0.201484764,0.373572939,0.569723065,false,0.34264714,0.150259291,0.604248668,false,0.052490798,0.829461315,0.908021995,false,-0.13389508,0.56685226,0.800489655,false,"chr_001",191279,194063,"-","MS01G00220","--","K03798 cell division protease FtsH [EC:3.4.24.-] | (RefSeq) LOW QUALITY PROTEIN: ATP-dependent zinc metalloprotease FTSH, chloroplastic-like (A)","--","hypothetical protein DVH24_013070 [Malus domestica]","FTSH_TOBAC RecName: Full=ATP-dependent zinc metalloprotease FTSH, chloroplastic; EC=3.4.24.-; AltName: Full=DS9; Flags: Precursor;","A0A498HPK2_MALDO RecName: Full=AAA domain-containing protein {ECO:0000259|SMART:SM00382};","AAA+-type ATPase containing the peptidase M41 domain","GO:0031969,chloroplast membrane; GO:0009534,chloroplast thylakoid; GO:0016021,integral component of membrane; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0004176,ATP-dependent peptidase activity; GO:0046872,metal ion binding; GO:0004222,metalloendopeptidase activity; GO:0007049,cell cycle; GO:0051301,cell division; GO:0006508,proteolysis; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0008233,peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0043169,cation binding; GO:0004175,endopeptidase activity; GO:0008237,metallopeptidase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009579,thylakoid; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0031224,intrinsic component of membrane","PF01434.21:Peptidase family M41","--","--","--"]
["MS01G00250",147.0978,158.5021,102.7569,27.2476,57.6126,24.1105,29.6481,57.0307,40.7437,56.2488,24.7195,21.6786,32.5784,25.1778,35.7794,8280,8893,5666,1122,2834,1140,1267,2279,2072,2570,1191,1235,1439,1109,1579,-1.787282171,"1.3247E-06","6.73078E-06","down",-1.837511628,"3.09029E-17","3.75012E-16","down",-1.675581121,"4.45562E-06","1.59073E-05","down",-1.398899722,"4.85046E-07","1.91432E-06","down",0.404620939,0.31224076,0.462990605,false,0.454829734,0.083277817,0.207411306,false,0.271257992,0.492390234,0.85193582,false,0.134441393,0.769491018,0.872868792,false,0.191672889,0.589670063,0.815264105,false,"chr_001",201608,204788,"+","MS01G00250","--","K10526 OPC-8:0 CoA ligase 1 [EC:6.2.1.-] | (RefSeq) 4-coumarate--CoA ligase-like 5 (A)","ko00592: alpha-Linolenic acid metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","4-coumarate--CoA ligase-like 5 [Malus domestica]","4CLL5_ARATH RecName: Full=4-coumarate--CoA ligase-like 5 {ECO:0000303|PubMed:12805634}; EC=6.2.1.- {ECO:0000305|PubMed:16963437, ECO:0000305|PubMed:18267944}; AltName: Full=4-coumarate--CoA ligase isoform 9; Short=At4CL9; AltName: Full=Peroxisomal OPC-8:0-CoA ligase 1 {ECO:0000303|PubMed:18267944, ECO:0000303|PubMed:19704801};","A0A498HWU8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73383.1};","Acyl-CoA synthetase","GO:0005777,peroxisome; GO:0005524,ATP binding; GO:0016405,CoA-ligase activity; GO:0102391,decanoate-CoA ligase activity; GO:0009695,jasmonic acid biosynthetic process; GO:0009617,response to bacterium; GO:0009753,response to jasmonic acid; GO:0009611,response to wounding; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016874,ligase activity; GO:0016877,ligase activity, forming carbon-sulfur bonds; GO:0015645,fatty acid ligase activity; GO:0016878,acid-thiol ligase activity; GO:0031956,medium-chain fatty acid-CoA ligase activity; GO:0140657,ATP-dependent activity; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009694,jasmonic acid metabolic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0070542,response to fatty acid; GO:1901700,response to oxygen-containing compound; GO:0006950,response to stress; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0042579,microbody; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00501.31:AMP-binding enzyme","--","--","--"]
["MS01G00270",103.1533,65.9307,74.4117,4.4384,1.0032,1.7008,1.2402,3.0186,5.8221,1.4,2.0863,1.1549,2.0689,1.2033,0.704,3177,2024,2245,100,27,44,29,66,162,35,55,36,50,29,17,-5.539912404,"9.42792E-93","7.3317E-90","down",-5.640036377,"9.1367E-68","1.29746E-65","down",-4.887828007,"1.19407E-27","3.54955E-26","down",-4.32933514,"6.45136E-26","1.28638E-24","down",1.220338761,0.02014732,0.054884157,false,1.327623158,0.018531955,0.068129472,false,0.561327291,0.3726563,0.792512816,false,0.662381411,0.236488601,0.41678785,false,0.774976344,0.198077002,0.475268209,false,"chr_001",235180,238367,"+","MS01G00270","--","--","--","hypothetical protein DVH24_013063 [Malus domestica]","DHN1_ORYSJ RecName: Full=Dehydrin DHN1 {ECO:0000305}; AltName: Full=Dehydration stress-inducible protein 1 {ECO:0000312|EMBL:AAW48310.1}; AltName: Full=Dehydrin 1 {ECO:0000303|PubMed:15879704}; Short=OsDhn1 {ECO:0000303|PubMed:15879704}; AltName: Full=Low tmperature-induced protein 9 {ECO:0000303|Ref.8}; Short=OsLIP9 {ECO:0000303|Ref.8};","A0A498HRH2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73379.1};","--","GO:0016020,membrane; GO:0009631,cold acclimation; GO:0009737,response to abscisic acid; GO:0009414,response to water deprivation; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009266,response to temperature stimulus; GO:0009409,response to cold; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:0010035,response to inorganic substance; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00257.22:Dehydrin","--","--","--"]
["MS01G00390",14.5885,18.33,21.4419,54.4119,42.5802,46.6897,46.441,35.1266,45.4169,49.4166,50.023,54.075,56.6975,70.5093,57.6723,523,655,753,1427,1334,1406,1264,894,1471,1438,1535,1962,1595,1978,1621,1.688018156,"3.14349E-24","1.02306E-22","up",2.060863937,"3.16024E-32","1.04881E-30","up",1.619592471,"4.04248E-17","5.26264E-16","up",1.50924284,"3.19033E-15","3.04304E-14","up",-0.166085567,0.28283312,0.431288918,false,-0.536662948,0.001690033,0.010224811,false,-0.112361151,0.527898653,0.865948329,false,-0.051395033,0.731384187,0.84820268,false,-0.416404838,0.012368775,0.083693038,false,"chr_001",328719,330251,"+","MS01G00390","--","--","--","F-box protein SKIP23-like [Malus domestica]","SKI23_ARATH RecName: Full=F-box protein SKIP23; AltName: Full=SKP1-interacting partner 23;","A0A540LJP3_MALBA RecName: Full=DUF295 domain-containing protein {ECO:0000259|Pfam:PF03478};","--","GO:0005634,nucleus; GO:0016567,protein ubiquitination; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03478.21:Protein of unknown function (DUF295)","--","--","--"]
["MS01G00400",2.9476,5.0572,5.582,2.2774,1.3687,2.6954,2.5321,2.1663,1.4658,0.7368,0.9982,1.2663,1.4154,0.7643,0.4359,69,118,128,39,28,53,45,36,31,14,20,30,26,14,8,-1.981502612,"1.78633E-07","1.04634E-06","down",-2.072498872,"4.5604E-06","1.61318E-05","down",-0.893039271,0.016547121,0.02991673,false,-0.851576598,0.021145565,0.037369642,false,1.143772621,0.007796192,0.025076441,"up",1.23779294,0.016235687,0.061698733,false,0.039917951,0.920957438,0.981121202,false,1.106798784,0.010330354,0.041302502,"up",1.204666758,0.02011729,0.116801642,false,"chr_001",330953,332285,"-","MS01G00400","--","K24997 ganglioside-induced differentiation-associated protein 2 | (RefSeq) protein GDAP2 homolog isoform X3 (A)","--","ganglioside-induced differentiation-associated protein 2-like [Malus domestica]","--","A0A498HV35_MALDO RecName: Full=CRAL-TRIO domain-containing protein {ECO:0000259|SMART:SM00516};","Hismacro and SEC14 domain-containing proteins","--","PF13716.9:Divergent CRAL/TRIO domain","--","--","--"]
["MS01G00410",9.2776,11.5501,10.0737,1.2682,0.9169,1.3053,1.0554,0.6534,1.0269,3.9485,4.8283,5.7085,4.2993,3.7724,2.797,220,273,234,22,19,26,19,11,22,76,98,137,80,70,52,-0.904840715,"2.33574E-05","9.41143E-05",false,-1.212737952,"3.80032E-07","1.56818E-06","down",-2.940638222,"1.13286E-25","2.95217E-24","down",-3.207449684,"2.05774E-26","4.20163E-25","down",-2.288221473,"4.44601E-11","8.85027E-10","down",-1.98148772,"1.78426E-07","3.93746E-06","down",-0.273374334,0.547824221,0.873824353,false,-2.015666701,"6.17106E-10","2.15471E-08","down",-1.70195852,"1.5608E-06","7.05744E-05","down","chr_001",351177,353908,"+","MS01G00410","--","K09272 FACT complex subunit SSRP1/POB3 | (RefSeq) FACT complex subunit SSRP1-like (A)","--","high mobility group B protein 9-like isoform X3 [Malus sylvestris]","HMGB9_ARATH RecName: Full=High mobility group B protein 9; AltName: Full=Nucleosome/chromatin assembly factor group D 09; Short=Nucleosome/chromatin assembly factor group D 9; AltName: Full=Protein NUCLEAR FUSION DEFECTIVE 9 {ECO:0000303|PubMed:16698901};","A0A498HPI1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73366.1};","DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0000741,karyogamy; GO:0010197,polar nucleus fusion; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0006996,organelle organization; GO:0006997,nucleus organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0048284,organelle fusion; GO:0071840,cellular component organization or biogenesis; GO:0007275,multicellular organism development; GO:0009553,embryo sac development; GO:0009559,embryo sac central cell differentiation; GO:0009561,megagametogenesis; GO:0030154,cell differentiation; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0048869,cellular developmental process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF01388.24:ARID/BRIGHT DNA binding domain","ARID","TR","ARID"]
["MS01G00420",9.068,10.5203,12.4597,20.3266,15.0485,20.8745,15.6803,10.5939,15.8405,18.1605,18.8785,19.5757,21.3593,22.1332,18.3084,211,244,284,346,306,408,277,175,333,343,376,461,390,403,334,1.010397589,"1.83763E-09","1.44733E-08","up",1.243527241,"4.86488E-12","3.62589E-11","up",1.023118429,"4.92475E-07","2.02581E-06","up",0.678397521,0.002237151,0.004874771,false,-0.318852948,0.109804465,0.21175191,false,-0.549428359,0.008780043,0.038536103,false,-0.346116496,0.121516471,0.565183178,false,0.029188234,0.866702621,0.929154602,false,-0.195659541,0.293558399,0.585937636,false,"chr_001",354581,356473,"-","MS01G00420","--","--","--","mediator of RNA polymerase II transcription subunit 30 [Malus domestica]","MED30_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 30;","A0A498HV32_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73365.1};","--","GO:0016592,mediator complex; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex","PF11315.11:Mediator complex subunit 30","--","--","--"]
["MS01G00430",18.4352,20.5811,22.9406,17.8819,14.751,26.2167,12.7803,6.9313,11.104,29.9481,38.1566,31.6542,19.6733,31.3309,23.4033,1064,1184,1297,755,744,1271,560,284,579,1403,1885,1849,891,1415,1059,0.872086237,"5.37576E-10","4.54923E-09",false,0.555618181,0.003556793,0.007483225,false,0.130457559,0.551341216,0.62503804,false,-0.724030487,0.002022505,0.004450408,false,-1.584787241,"3.33728E-11","6.77135E-10","down",-1.26544344,"1.52151E-06","2.62826E-05","down",-0.85648912,0.002376983,0.093372764,false,-0.726584062,0.000920363,0.0058409,false,-0.401174237,0.108228015,0.339274387,false,"chr_001",357044,362688,"-","MS01G00430","--","K04424 sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25] | (RefSeq) serine/threonine-protein kinase EDR1 (A)","--","serine/threonine-protein kinase STY46-like [Malus sylvestris]","STY46_ARATH RecName: Full=Serine/threonine-protein kinase STY46 {ECO:0000305}; EC=2.7.11.1 {ECO:0000269|PubMed:17090544}; AltName: Full=Serine/threonine/tyrosine-protein kinase 46 {ECO:0000303|PubMed:16429265};","A0A6P5RIH9_PRUAV SubName: Full=serine/threonine-protein kinase STY46-like {ECO:0000313|RefSeq:XP_021802591.1, ECO:0000313|RefSeq:XP_021802592.1};","Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs","GO:0005829,cytosol; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004712,protein serine/threonine/tyrosine kinase activity; GO:0071456,cellular response to hypoxia; GO:0009658,chloroplast organization; GO:0006468,protein phosphorylation; GO:0009737,response to abscisic acid; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006996,organelle organization; GO:0009657,plastid organization; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["MS01G00440",291.6126,355.5601,360.9842,120.7368,112.8039,172.7317,98.4459,55.6177,87.9927,279.035,376.6288,359.2142,263.5763,381.3095,259.3584,5517,6705,6690,1671,1865,2745,1414,747,1504,4285,6099,6878,3913,5645,3847,0.192492028,0.198297583,0.282138602,false,0.135439978,0.463999875,0.544677065,false,-1.104140472,"5.25172E-09","2.87657E-08","down",-1.77606825,"2.11783E-15","2.05498E-14","down",-1.95671101,"3.51185E-17","1.46487E-15","down",-1.896902523,"2.95501E-14","2.3566E-12","down",-0.674286105,0.00779321,0.177982487,false,-1.280602486,"3.81226E-11","1.67004E-09","down",-1.214708825,"4.79738E-08","3.56498E-06","down","chr_001",367145,367953,"+","MS01G00440","--","K02638 plastocyanin | (RefSeq) plastocyanin (A)","ko00195: Photosynthesis; ko01100: Metabolic pathways","plastocyanin [Malus domestica]","PLAS1_POPNI RecName: Full=Plastocyanin A, chloroplastic; Short=PCa; Flags: Precursor;","A0A498HWS3_MALDO RecName: Full=Plastocyanin {ECO:0000256|RuleBase:RU363020};","--","GO:0009535,chloroplast thylakoid membrane; GO:0005507,copper ion binding; GO:0009055,electron transfer activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity","PF00127.23:Copper binding proteins, plastocyanin/azurin family","--","--","--"]
["MS01G00460",2.4664,2.9216,2.1538,1.2186,0.6801,0.8844,0.5088,0.6279,1.7762,0.0732,1.1457,0.2936,0.0379,0.7215,0.5685,83,98,71,30,20,25,13,15,54,2,33,10,1,19,15,-2.167033849,0.001101365,0.00308731,"down",-2.226307018,"9.3797E-05",0.000267241,"down",-1.237627222,0.000436909,0.001099137,"down",-1.096713078,0.018579225,0.033269066,"down",1.06790463,0.217240396,0.355222811,false,1.138076971,0.159371946,0.32622974,false,0.135771025,0.810569043,0.954413429,false,0.945273453,0.240840637,0.422227074,false,1.01861367,0.168584583,0.435898084,false,"chr_001",375828,381167,"-","MS01G00460","--","--","--","uncharacterized protein LOC103450342 isoform X1 [Malus domestica]","--","A0A540MGI9_MALBA RecName: Full=MFS domain-containing protein {ECO:0000259|PROSITE:PS50850};","Predicted transporter ADD1 (major facilitator superfamily)","GO:0016021,integral component of membrane; GO:0022857,transmembrane transporter activity; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF07690.19:Major Facilitator Superfamily","--","--","--"]
["MS01G00470",111.266,112.0973,121.6655,59.7324,62.498,81.6826,55.5188,36.8955,45.3997,121.3864,158.8267,142.3248,96.5615,144.7431,109.1747,6185,6211,6625,2429,3036,3814,2343,1456,2280,5477,7557,8007,4212,6296,4758,0.475537333,"6.21438E-05",0.000231053,false,0.313387385,0.060104653,0.093753229,false,-0.548742867,0.000206033,0.000550889,false,-1.038967548,"7.9103E-09","3.93662E-08","down",-1.503254901,"4.80679E-15","1.56048E-13","down",-1.338650224,"6.59455E-10","2.44626E-08","down",-0.493623264,0.016536524,0.256964226,false,-1.008038832,"9.53558E-10","3.17707E-08","down",-0.837130378,"2.97335E-05",0.000826342,false,"chr_001",385386,387762,"+","MS01G00470","--","K08242 24-methylenesterol C-methyltransferase [EC:2.1.1.143] | (RefSeq) 24-methylenesterol C-methyltransferase 2-like (A)","ko00100: Steroid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","24-methylenesterol C-methyltransferase 2-like [Malus domestica]","SMT2_ARATH RecName: Full=24-methylenesterol C-methyltransferase 2; Short=24-sterol C-methyltransferase 2; Short=Sterol-C-methyltransferase 2; EC=2.1.1.143; AltName: Full=Protein COTYLEDON VASCULAR PATTERN 1;","A0A498HRF2_MALDO RecName: Full=Methyltransferase {ECO:0000256|RuleBase:RU362025}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362025};","SAM-dependent methyltransferases","GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0005634,nucleus; GO:0030797,24-methylenesterol C-methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0032259,methylation; GO:0009825,multidimensional cell growth; GO:0032876,negative regulation of DNA endoreduplication; GO:0007389,pattern specification process; GO:0016126,sterol biosynthetic process; GO:0010051,xylem and phloem pattern formation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0016741,transferase activity, transferring one-carbon groups; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016049,cell growth; GO:0040007,growth; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006260,DNA replication; GO:0006261,DNA-templated DNA replication; GO:0006275,regulation of DNA replication; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0007049,cell cycle; GO:0008156,negative regulation of DNA replication; GO:0009892,negative regulation of metabolic process; GO:0010564,regulation of cell cycle process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0010948,negative regulation of cell cycle process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0022402,cell cycle process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0032875,regulation of DNA endoreduplication; GO:0034641,cellular nitrogen compound metabolic process; GO:0042023,DNA endoreduplication; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044786,cell cycle DNA replication; GO:0045786,negative regulation of cell cycle; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051052,regulation of DNA metabolic process; GO:0051053,negative regulation of DNA metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051726,regulation of cell cycle; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0090329,regulation of DNA-templated DNA replication; GO:1901360,organic cyclic compound metabolic process; GO:2000104,negative regulation of DNA-templated DNA replication; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0006629,lipid metabolic process; GO:0006694,steroid biosynthetic process; GO:0008202,steroid metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0016125,sterol metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0003002,regionalization; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF08498.13:Sterol methyltransferase C-terminal","--","--","--"]
["MS01G00480",81.04,91.3543,97.1739,18.4366,14.0953,24.0846,12.3226,7.8518,11.218,53.4016,65.4415,57.5804,23.9434,43.0895,36.0958,2079,2336,2442,346,316,519,240,143,260,1112,1437,1495,482,865,726,-0.426405569,0.000652474,0.001933929,false,-1.096889568,"1.59742E-07","6.95913E-07","down",-2.045492047,"2.52373E-24","5.98502E-23","down",-2.817632669,"1.66608E-48","9.85408E-47","down",-2.379296843,"3.28833E-33","5.07654E-31","down",-1.70700418,"7.3117E-11","3.31699E-09","down",-0.773937184,0.002355952,0.092851481,false,-1.603601293,"2.56023E-15","2.1825E-13","down",-0.925158319,0.000474708,0.007544696,false,"chr_001",389702,390798,"+","MS01G00480","--","K03671 thioredoxin 1 | (RefSeq) thioredoxin H-type (A)","--","hypothetical protein C1H46_016405 [Malus baccata]","CDSP_ARATH RecName: Full=Thioredoxin-like protein CDSP32, chloroplastic; AltName: Full=Chloroplastic drought-induced stress protein of 32 KDa; Short=AtCDSP32; Flags: Precursor;","A0A540MGI8_MALBA RecName: Full=Thioredoxin domain-containing protein {ECO:0000259|PROSITE:PS51352};","Thioredoxin","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0005739,mitochondrion; GO:0016671,oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0045454,cell redox homeostasis; GO:0042742,defense response to bacterium; GO:0010286,heat acclimation; GO:0006979,response to oxidative stress; GO:0009414,response to water deprivation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016667,oxidoreductase activity, acting on a sulfur group of donors; GO:0008150,biological_process; GO:0009987,cellular process; GO:0019725,cellular homeostasis; GO:0042592,homeostatic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0009266,response to temperature stimulus; GO:0009408,response to heat; GO:0009628,response to abiotic stimulus; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:0010035,response to inorganic substance; GO:0042221,response to chemical; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma","PF00085.23:Thioredoxin","--","--","--"]
["MS01G00500",2.4336,2.9647,3.7264,1.1881,2.188,1.4486,1.3738,1.4691,2.5012,10.0651,14.6218,12.3662,6.424,7.5528,7.76,14,17,21,5,11,7,6,6,13,47,72,72,29,34,35,2.207087502,"6.27398E-10","5.26412E-09","up",1.54677069,"9.87067E-05",0.000280067,"up","NA","NA","NA","NA","NA","NA","NA","NA",-2.662992352,"2.81089E-09","4.25166E-08","down",-2.001391446,"4.21024E-05",0.000468853,"down","NA","NA","NA","NA",-2.872554144,"5.78919E-10","2.03137E-08","down",-2.203463628,"9.63584E-06",0.000324134,"down","chr_001",395866,396256,"+","MS01G00500","--","--","--","uncharacterized protein LOC126605505 [Malus sylvestris]","--","A0A540N939_MALBA RecName: Full=LYR motif-containing protein 2 {ECO:0000256|ARBA:ARBA00026235};","--","--","PF05347.18:Complex 1 protein (LYR family)","--","--","--"]
["MS01G00530",0.7827,0.5711,0.9079,3.2582,2.7682,1.3553,8.294,3.5579,0.3544,3.6377,0.4572,1.5115,0.3627,0.591,3.9023,22,16,25,67,68,32,177,71,9,83,11,43,8,13,86,1.530434041,0.023491264,0.046098038,"up",1.383932325,0.069014108,0.105960584,false,1.934615103,"2.80882E-05","8.74684E-05","up",2.747905089,0.011307405,0.021255864,"up",1.223787193,0.335785528,0.488318421,false,1.370767808,0.318529749,0.515206834,false,0.795408951,0.472363956,0.843401327,false,0.430020718,0.527958874,0.704681613,false,0.576547551,0.452401294,0.724207858,false,"chr_001",402512,404341,"+","MS01G00530","--","K00472 prolyl 4-hydroxylase [EC:1.14.11.2] | (RefSeq) probable prolyl 4-hydroxylase 3 isoform X1 (A)","ko00330: Arginine and proline metabolism; ko01100: Metabolic pathways","probable prolyl 4-hydroxylase 3 isoform X1 [Malus domestica]","P4H3_ARATH RecName: Full=Probable prolyl 4-hydroxylase 3 {ECO:0000305}; Short=AtP4H3 {ECO:0000303|Ref.5}; EC=1.14.11.2 {ECO:0000305};","A0A498HTQ5_MALDO RecName: Full=Fe2OG dioxygenase domain-containing protein {ECO:0000259|PROSITE:PS51471};","Prolyl 4-hydroxylase alpha subunit","GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0000137,Golgi cis cisterna; GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0005802,trans-Golgi network; GO:0005506,iron ion binding; GO:0031418,L-ascorbic acid binding; GO:0004656,procollagen-proline 4-dioxygenase activity; GO:0018401,peptidyl-proline hydroxylation to 4-hydroxy-L-proline; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0019842,vitamin binding; GO:0030246,carbohydrate binding; GO:0031406,carboxylic acid binding; GO:0036094,small molecule binding; GO:0043168,anion binding; GO:0043177,organic acid binding; GO:0048029,monosaccharide binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016706,2-oxoglutarate-dependent dioxygenase activity; GO:0019798,procollagen-proline dioxygenase activity; GO:0031543,peptidyl-proline dioxygenase activity; GO:0031545,peptidyl-proline 4-dioxygenase activity; GO:0051213,dioxygenase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0018126,protein hydroxylation; GO:0018193,peptidyl-amino acid modification; GO:0018208,peptidyl-proline modification; GO:0019511,peptidyl-proline hydroxylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0097708,intracellular vesicle; GO:0005795,Golgi stack; GO:0031985,Golgi cisterna; GO:0098791,Golgi apparatus subcompartment; GO:0031224,intrinsic component of membrane","PF13640.9:2OG-Fe(II) oxygenase superfamily","--","--","--"]
["MS01G00550",3.8404,3.68,4.7246,2.2547,1.5494,2.1688,1.7834,0.8322,2.3979,2.305,3.1637,3.7216,1.7882,3.3033,2.826,156,149,188,67,55,74,55,24,88,76,110,153,57,105,90,-0.22542854,0.342557261,0.441932665,false,-0.338367177,0.200394783,0.267915662,false,-0.826687261,0.000878748,0.002083616,false,-1.004866619,0.00389314,0.008078463,"down",-0.764090137,0.049334453,0.113473236,false,-0.651740684,0.106379864,0.246964989,false,-0.181845868,0.650331417,0.908447141,false,-0.582445692,0.042837143,0.122917009,false,-0.463410729,0.141226718,0.3941894,false,"chr_001",408150,411184,"-","MS01G00550","--","K13412 calcium-dependent protein kinase [EC:2.7.11.1] | (RefSeq) calcium-dependent protein kinase 29 (A)","ko04626: Plant-pathogen interaction","calcium-dependent protein kinase 29 [Malus domestica]","CDPKT_ARATH RecName: Full=Calcium-dependent protein kinase 29; EC=2.7.11.1;","A0A498HW04_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73351.1};","Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily","GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0005509,calcium ion binding; GO:0009931,calcium-dependent protein serine/threonine kinase activity; GO:0005516,calmodulin binding; GO:0004683,calmodulin-dependent protein kinase activity; GO:0106310,protein serine kinase activity; GO:0035556,intracellular signal transduction; GO:0018105,peptidyl-serine phosphorylation; GO:0046777,protein autophosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0010857,calcium-dependent protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0005515,protein binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0018193,peptidyl-amino acid modification; GO:0018209,peptidyl-serine modification; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0016020,membrane; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G00610",31.9221,24.5675,25.4037,1.1636,1.3637,1.081,0.4111,1.2391,1.4133,3.1112,2.3537,1.7943,0.9763,1.9581,2.3887,1125,863,877,30,42,32,11,31,45,89,71,64,27,54,66,-3.312081656,"1.55476E-40","1.38806E-38","down",-3.658366423,"2.23611E-40","1.1368E-38","down",-4.286164197,"8.07731E-69","1.60394E-66","down",-4.459479856,"3.35948E-42","1.5282E-40","down",-1.143443725,0.01596765,0.045289772,"down",-0.787353112,0.122871829,0.272977542,false,-0.17790794,0.719520162,0.929085945,false,-0.960153747,0.008244113,0.034527239,false,-0.601409635,0.142820538,0.396782567,false,"chr_001",444552,447098,"-","MS01G00610","--","K00083 cinnamyl-alcohol dehydrogenase [EC:1.1.1.195] | (RefSeq) probable cinnamyl alcohol dehydrogenase 6 (A)","ko00940: Phenylpropanoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","probable cinnamyl alcohol dehydrogenase 6 [Malus domestica]","CADH6_ORYSJ RecName: Full=Probable cinnamyl alcohol dehydrogenase 6 {ECO:0000305}; Short=OsCAD6 {ECO:0000303|PubMed:15452707}; EC=1.1.1.195 {ECO:0000305};","A0A540MGP3_MALBA RecName: Full=PKS_ER domain-containing protein {ECO:0000259|SMART:SM00829};","Alcohol dehydrogenase, class V","GO:0045551,cinnamyl-alcohol dehydrogenase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0052747,sinapyl alcohol dehydrogenase activity; GO:0008270,zinc ion binding; GO:0009809,lignin biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006725,cellular aromatic compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009698,phenylpropanoid metabolic process; GO:0009699,phenylpropanoid biosynthetic process; GO:0009808,lignin metabolic process; GO:0009987,cellular process; GO:0019438,aromatic compound biosynthetic process; GO:0019748,secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044550,secondary metabolite biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process","PF08240.15:Alcohol dehydrogenase GroES-like domain","--","--","--"]
["MS01G00630",1.88,1.5903,1.2418,1.159,0.8015,1.7115,0.5341,0.675,0.5712,1.1354,2.7994,1.4205,0.7047,1.4133,1.3635,51,43,33,23,19,39,11,13,14,25,65,39,15,30,29,0.352956531,0.400598311,0.500510768,false,-0.152729606,0.707487361,0.76622662,false,-0.161220804,0.697888438,0.755435005,false,-1.129765952,0.010496262,0.01988055,"down",-1.470526893,0.00352949,0.012845445,"down",-0.960475835,0.053673486,0.151346576,false,-0.966147949,0.049646686,0.400369963,false,-0.502629473,0.299545911,0.489393368,false,0.014345394,0.975470223,0.992855791,false,"chr_001",454537,456592,"+","MS01G00630","--","K14432 ABA responsive element binding factor | (RefSeq) protein FD-like (A)","ko04075: Plant hormone signal transduction","hypothetical protein C1H46_016421 [Malus baccata]","FD_ARATH RecName: Full=Protein FD {ECO:0000303|PubMed:16099980}; AltName: Full=bZIP transcription factor 14 {ECO:0000303|PubMed:11906833}; Short=AtbZIP14 {ECO:0000303|PubMed:11906833};","A0A540MGM1_MALBA RecName: Full=BZIP domain-containing protein {ECO:0000259|PROSITE:PS00036};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0043621,protein self-association; GO:0009648,photoperiodism; GO:0009911,positive regulation of flower development; GO:0045893,positive regulation of DNA-templated transcription; GO:0009909,regulation of flower development; GO:2000028,regulation of photoperiodism, flowering; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0005515,protein binding; GO:0008150,biological_process; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048518,positive regulation of biological process; GO:0048580,regulation of post-embryonic development; GO:0048582,positive regulation of post-embryonic development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048831,regulation of shoot system development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051094,positive regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0051240,positive regulation of multicellular organismal process; GO:0061458,reproductive system development; GO:0065007,biological regulation; GO:0090567,reproductive shoot system development; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:2000243,positive regulation of reproductive process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048522,positive regulation of cellular process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0048573,photoperiodism, flowering; GO:0048583,regulation of response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00170.24:bZIP transcription factor","--","--","--"]
["MS01G00660",1.4834,2.3294,1.9752,1.1462,0.8856,1.3053,1.3593,1.1811,1.642,3.4167,1.8838,2.4854,1.3973,0.8242,1.234,23,36,30,13,12,17,16,13,23,43,25,39,17,10,15,0.621895453,0.130027946,0.198926063,false,-0.448523953,0.33297739,0.413207007,false,-0.586144855,0.202866916,0.270616417,false,-0.182649114,0.67615331,0.739569873,false,-0.790132021,0.077425941,0.162075259,false,"NA","NA","NA","NA","NA","NA","NA","NA",-1.190328602,0.01185924,0.046015342,"down","NA","NA","NA","NA","chr_001",465119,466475,"-","MS01G00660","--","--","--","hypothetical protein DVH24_013026 [Malus domestica]","--","A0A498HTP5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73342.1};","--","GO:0016788,hydrolase activity, acting on ester bonds; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity","--","--","--","--"]
["MS01G00740",6.8251,6.4888,7.659,0.32,0.5921,0.9093,0.0325,0.3471,0.2864,2.0641,4.3611,3.2866,1.6171,1.4169,1.8542,554,525,609,19,42,62,2,20,21,136,303,270,103,90,118,-0.934049066,0.000157216,0.000540284,false,-1.807465699,"2.96335E-24","6.00332E-23","down",-3.308583936,"4.23936E-27","1.21417E-25","down",-4.696397675,"2.71184E-32","7.83273E-31","down",-3.74920022,"2.74553E-12","6.51542E-11","down",-2.871859672,"1.57977E-08","4.37607E-07","down",-1.377304773,0.050812733,0.404983119,false,-2.363361577,"4.03385E-09","1.18662E-07","down",-1.478250955,"5.99307E-05",0.001454605,"down","chr_001",565751,572051,"-","MS01G00740","--","K05658 ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] | (RefSeq) ABC transporter B family member 13-like isoform X1 (A)","ko02010: ABC transporters","ABC transporter B family member 13-like isoform X1 [Malus domestica]","AB13B_ARATH RecName: Full=ABC transporter B family member 13; Short=ABC transporter ABCB.13; Short=AtABCB13; AltName: Full=P-glycoprotein 13; AltName: Full=Putative multidrug resistance protein 15;","A0A540MGT1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97913.1};","Multidrug/pheromone exporter, ABC superfamily","GO:0016021,integral component of membrane; GO:0140359,ABC-type transporter activity; GO:0005524,ATP binding; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015399,primary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0140657,ATP-dependent activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006810,transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00664.26:ABC transporter transmembrane region","--","--","--"]
["MS01G00760",25.8971,19.2405,11.356,0.9124,0.5092,0.5297,0.0586,0.188,0.2955,0.4386,0.5199,1.1431,0.6238,0.4549,0.1135,582,431,250,15,10,10,1,3,6,8,10,26,11,8,2,-4.548530125,"6.91653E-26","2.52958E-24","down",-5.277932439,"2.46525E-28","6.5778E-27","down",-4.66251283,"3.17208E-27","9.15539E-26","down",-6.397155003,"3.14491E-28","7.1095E-27","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",576164,577124,"-","MS01G00760","--","--","--","uncharacterized protein LOC103450369 [Malus domestica]","--","A0A540MGN0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97915.1};","--","--","--","--","--","--"]
["MS01G00770",66.522,70.7147,79.2729,14.8458,14.1839,26.8529,11.7716,11.6855,11.9349,24.749,40.9922,34.8991,21.6885,26.3674,22.9218,3424,3628,3997,559,638,1161,460,427,555,1034,1806,1818,876,1062,925,-0.925648373,"4.24403E-07","2.34071E-06",false,-1.315914273,"4.70384E-24","9.34974E-23","down",-1.751909341,"1.05841E-12","9.00476E-12","down",-2.328078112,"2.90824E-74","4.65163E-72","down",-1.390832616,"1.90941E-12","4.6477E-11","down",-0.997162629,"3.43188E-12","2.03799E-10",false,-0.576519095,0.022731447,0.293191017,false,-0.811491919,0.003576192,0.017609153,false,-0.411391349,0.099346862,0.323507557,false,"chr_001",590443,594768,"+","MS01G00770","--","--","--","synaptotagmin-2 [Malus domestica]","SYT2_ARATH RecName: Full=Synaptotagmin-2; AltName: Full=NTMC2T1.2; AltName: Full=Synaptotagmin B;","A0A498HRF4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73330.1};","Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain","GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0008289,lipid binding; GO:0046872,metal ion binding; GO:0006869,lipid transport; GO:0009306,protein secretion; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006810,transport; GO:0008150,biological_process; GO:0010876,lipid localization; GO:0033036,macromolecule localization; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0008104,protein localization; GO:0009987,cellular process; GO:0015031,protein transport; GO:0032940,secretion by cell; GO:0035592,establishment of protein localization to extracellular region; GO:0045184,establishment of protein localization; GO:0046903,secretion; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0071692,protein localization to extracellular region; GO:0071705,nitrogen compound transport; GO:0140352,export from cell; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane","PF00168.33:C2 domain","--","--","--"]
["MS01G00780",6.0135,6.9905,5.4049,1.8228,3.3509,3.455,1.2742,1.8599,1.693,10.2109,9.1638,9.5585,9.2294,9.3723,10.4714,460,533,405,102,224,222,74,101,117,634,600,740,554,561,628,0.839993539,"8.35328E-07","4.38295E-06",false,0.949210097,"3.93255E-09","2.11462E-08",false,-0.879200372,0.001611299,0.003627401,false,-1.652199671,"1.61285E-13","1.32768E-12","down",-2.478077211,"3.87688E-34","6.47803E-32","down",-2.585241126,"3.85922E-40","4.64331E-37","down",-0.774271621,0.015533334,0.250771749,false,-1.700190248,"1.96275E-10","7.57017E-09","down",-1.80075092,"4.34005E-12","1.07408E-09","down","chr_001",600744,604207,"+","MS01G00780","--","K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor protein kinase CLAVATA1 (A)","--","receptor protein kinase CLAVATA1 [Malus domestica]","CLV1_ARATH RecName: Full=Receptor protein kinase CLAVATA1; EC=2.7.11.1; Flags: Precursor;","A0A498HRC1_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0000325,plant-type vacuole; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0005524,ATP binding; GO:0043621,protein self-association; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0033612,receptor serine/threonine kinase binding; GO:0030154,cell differentiation; GO:0036289,peptidyl-serine autophosphorylation; GO:0009934,regulation of meristem structural organization; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0005102,signaling receptor binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0018105,peptidyl-serine phosphorylation; GO:0018193,peptidyl-amino acid modification; GO:0018209,peptidyl-serine modification; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046777,protein autophosphorylation; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0009933,meristem structural organization; GO:0048507,meristem development; GO:0048532,anatomical structure arrangement; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["MS01G00800",3.7766,3.6056,3.1713,20.567,20.7717,25.5261,25.5145,18.4477,22.2497,16.2096,15.3005,12.5189,21.4248,21.6406,21.9098,62,59,51,247,298,352,318,215,330,216,215,208,276,278,282,2.246464978,"7.56613E-22","2.1173E-20","up",2.913078429,"6.15844E-50","4.5704E-48","up",2.87364168,"6.61076E-42","4.28061E-40","up",2.931271662,"9.91063E-37","3.57383E-35","up",0.697225638,0.001258025,0.005291006,false,0.033418232,0.855728442,0.92196119,false,0.055134562,0.778440555,0.946693572,false,0.644276203,0.001309417,0.007802357,false,-0.013623919,0.932868723,0.979031368,false,"chr_001",619521,620222,"-","MS01G00800","--","--","--","uncharacterized protein LOC126604224 [Malus sylvestris]","--","A0A498HPE2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73326.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G00820",13.7307,10.3206,9.7451,2.8005,1.5463,2.439,1.378,1.9034,2.6054,4.1887,7.1805,5.8575,3.6107,7.6873,3.1691,315,236,219,47,31,47,24,31,54,78,141,136,65,138,57,-0.795018661,0.001789175,0.004756808,false,-0.937962098,0.006206083,0.012381566,false,-2.116338284,"1.11372E-12","9.45374E-12","down",-2.239509301,"6.17534E-14","5.29709E-13","down",-1.431853455,"2.21624E-05",0.000151844,"down",-1.290353011,0.002449368,0.01384706,"down",-0.125785812,0.74966446,0.938077142,false,-1.304878191,"8.55304E-05",0.000796834,"down",-1.152905664,0.006335549,0.051906877,false,"chr_001",634563,636352,"-","MS01G00820","--","--","--","pathogenesis-related thaumatin-like protein 3.5 [Malus sylvestris]","THLP1_ARATH RecName: Full=Thaumatin-like protein 1 {ECO:0000303|PubMed:15988566}; Short=AtTLP1 {ECO:0000303|PubMed:15988566}; Flags: Precursor;","A0A540MH80_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97922.1};","--","GO:0006952,defense response; GO:0009617,response to bacterium; GO:0009723,response to ethylene; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical","PF00314.20:Thaumatin family","--","--","--"]
["MS01G00840",79.9045,49.594,63.607,8.3734,5.045,10.1257,4.7794,2.4181,4.3185,34.8965,34.9158,35.5821,26.2524,23.9826,14.3321,2048,1267,1597,157,113,218,93,44,100,726,766,923,528,481,288,-0.68707526,0.000588555,0.001763041,false,-1.285485882,"1.51958E-06","5.77879E-06","down",-2.83512721,"9.32144E-24","2.12595E-22","down",-3.785127258,"1.09765E-41","4.8739E-40","down",-3.083620183,"2.48581E-37","5.23051E-35","down",-2.485391228,"8.80284E-15","7.7089E-13","down",-0.951460529,0.005621997,0.150744417,false,-2.13218785,"8.20065E-19","1.18771E-16","down",-1.525789252,"1.20121E-06","5.59584E-05","down","chr_001",641555,642650,"-","MS01G00840","--","K03686 molecular chaperone DnaJ | (RefSeq) chaperone protein dnaJ A6, chloroplastic-like isoform X1 (A)","--","hypothetical protein DVH24_013007 [Malus domestica]","DNJ11_ARATH RecName: Full=Chaperone protein dnaJ 11, chloroplastic; Short=AtDjC11; Short=AtJ11; Flags: Precursor;","A0A498HWM6_MALDO RecName: Full=J domain-containing protein {ECO:0000259|PROSITE:PS50076};","Molecular chaperone (DnaJ superfamily)","GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0005634,nucleus; GO:0009536,plastid; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma","PF00226.34:DnaJ domain","--","--","--"]
["MS01G00870",36.6594,34.1585,27.8979,2.629,2.7713,7.6884,1.0633,1.7726,2.0762,20.5343,33.0648,25.8763,8.4721,13.4113,11.0839,1544,1434,1151,81,102,272,34,53,79,702,1192,1103,280,442,366,-0.136853247,0.497795006,0.595198876,false,-1.296167596,"2.73416E-10","1.69093E-09","down",-2.72609828,"5.38407E-13","4.72649E-12","down",-4.049613176,"1.36891E-58","1.25308E-56","down",-3.900034268,"9.91864E-46","3.35415E-43","down",-2.737579878,"8.54583E-22","1.89191E-19","down",-1.323859645,0.003753127,0.120198734,false,-2.575184827,"2.89438E-11","1.3125E-09","down",-1.406438511,0.000337052,0.00575626,"down","chr_001",672356,675466,"+","MS01G00870","--","K07375 tubulin beta | (RefSeq) tubulin beta chain (A)","ko04145: Phagosome; ko04814: Motor proteins","tubulin beta chain [Malus domestica]","TBB6_GOSHI RecName: Full=Tubulin beta-6 chain; AltName: Full=Beta-6-tubulin;","A0A5N5HKT3_9ROSA RecName: Full=Tubulin beta chain {ECO:0000256|RuleBase:RU000352};","Beta tubulin","GO:0005737,cytoplasm; GO:0005874,microtubule; GO:0005525,GTP binding; GO:0005200,structural constituent of cytoskeleton; GO:0000226,microtubule cytoskeleton organization; GO:0007017,microtubule-based process; GO:0000278,mitotic cell cycle; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0019001,guanyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0007049,cell cycle; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0005856,cytoskeleton; GO:0015630,microtubule cytoskeleton; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0099080,supramolecular complex; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber","PF00091.28:Tubulin/FtsZ family, GTPase domain","--","--","--"]
["MS01G00880",1.7989,1.5211,1.574,3.1264,1.4115,2.784,1.8955,1.4479,4.5795,0.5382,1.5912,0.4317,1.9322,0.7225,0.6555,70,59,60,89,48,91,56,40,161,17,53,17,59,22,20,-0.770714176,0.117055807,0.182125844,false,-0.262177278,0.56236271,0.637908805,false,0.782170325,0.024831049,0.042983531,false,0.961792693,0.022266688,0.039155572,false,1.739684145,0.003086592,0.011440206,"up",1.242115301,0.022751823,0.079828984,false,0.182472218,0.699740716,0.923260137,false,1.562926526,0.003882544,0.018811024,"up",1.069894317,0.032312315,0.160450152,false,"chr_001",677321,679378,"-","MS01G00880","--","--","--","hypothetical protein DVH24_013004 [Malus domestica]","--","A0A498HRE4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73320.1};","--","--","--","--","--","--"]
["MS01G00940",4.5314,5.0584,5.3426,10.5566,9.0561,10.9412,6.305,5.0345,9.4662,7.2338,6.1888,6.4323,6.5067,8.6456,6.024,71,79,82,121,124,144,75,56,134,92,83,102,80,106,74,0.599981865,0.011594031,0.024991992,false,0.796898046,0.00162504,0.003662913,false,1.245184019,"1.482E-08","7.61478E-08","up",0.759801834,0.009048219,0.017404921,false,0.173035847,0.559340824,0.694691955,false,-0.020621656,0.946293327,0.971881129,false,-0.485077573,0.082080817,0.492735684,false,0.662940414,0.003133885,0.015823835,false,0.47359626,0.048133069,0.206421403,false,"chr_001",751315,753295,"+","MS01G00940","--","--","--","gibberellin-regulated protein 1-like [Malus domestica]","SNAK2_SOLTU RecName: Full=Snakin-2; Flags: Precursor;","A0A540MGR0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97938.1};","--","GO:0005576,extracellular region; GO:0006952,defense response; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF02704.17:Gibberellin regulated protein","--","--","--"]
["MS01G00950",12.8096,11.7323,15.1742,28.328,20.0861,25.3417,25.1774,17.961,21.8461,15.0146,15.1849,15.1859,19.4064,20.8263,18.0008,1091,996,1266,1765,1495,1813,1628,1086,1681,1038,1107,1309,1297,1388,1202,0.381909614,0.005581313,0.013126606,false,0.847030579,"3.761E-09","2.02902E-08",false,1.106717163,"9.16275E-10","5.55509E-09","up",0.996465783,"3.67921E-08","1.67878E-07",false,0.626414894,0.000182272,0.000981913,false,0.163676382,0.342058004,0.53929872,false,-0.112399436,0.568032262,0.880293666,false,0.7411907,"5.70716E-06","7.61679E-05",false,0.28402422,0.090194834,0.30559909,false,"chr_001",756730,762183,"+","MS01G00950","--","--","--","hypothetical protein DVH24_012997 [Malus domestica]","--","A0A498HWL8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73313.1};","--","--","--","--","--","--"]
["MS01G00990",3.9231,2.7551,4.0048,0.1788,0.5986,0.973,0.2153,0.0461,0.4704,2.0138,2.75,1.9704,1.5415,1.2534,1.0842,120,84,120,4,16,25,5,1,13,50,72,61,37,30,26,-0.483686686,0.080767412,0.133070796,false,-1.165774655,0.000170286,0.000463187,"down",-2.387974403,"6.35829E-07","2.57706E-06","down",-3.536043619,"5.58897E-12","3.93171E-11","down",-3.048658096,"7.47842E-08","8.74926E-07","down",-2.369633099,0.000160686,0.00145316,"down","NA","NA","NA","NA",-1.891897378,0.000276042,0.00214391,"down",-1.200533897,0.03296652,0.162447291,false,"chr_001",780270,782743,"-","MS01G00990","--","K18801 glucuronoxylan 4-O-methyltransferase [EC:2.1.1.112] | (RefSeq) glucuronoxylan 4-O-methyltransferase 3-like (A)","--","hypothetical protein DVH24_012992 [Malus domestica]","--","A0A498HP36_MALDO RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};","--","--","--","C2H2","TF","C2H2"]
["MS01G01000",2.9555,2.6541,2.1309,1.1866,1.3954,1.8946,1.6606,1.6885,2.6537,0.8148,1.5695,0.8781,0.9745,0.8188,1.0545,143,128,101,42,59,77,61,58,116,32,65,43,37,31,40,-1.074075089,0.000845777,0.002436732,"down",-1.153194351,"5.41583E-05",0.000160852,"down",-0.580723633,0.043570885,0.070732634,false,-0.089512408,0.75205485,0.803822962,false,0.994838479,0.006050328,0.020267172,false,1.080978773,0.000777809,0.005391861,"up",0.491183475,0.123743784,0.569366647,false,0.506050429,0.176166966,0.34183684,false,0.597420507,0.067223692,0.255186826,false,"chr_001",787237,790872,"+","MS01G01000","--","K03256 tRNA (adenine58-N1)-methyltransferase non-catalytic subunit | (RefSeq) tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 (A)","--","tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 [Malus domestica]","--","A0A498HUW7_MALDO RecName: Full=tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 {ECO:0000256|ARBA:ARBA00021704, ECO:0000256|PIRNR:PIRNR038170};","tRNA(1-methyladenosine) methyltransferase, subunit GCD10","GO:0005634,nucleus; GO:0031515,tRNA (m1A) methyltransferase complex; GO:0030488,tRNA methylation; GO:0001510,RNA methylation; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006399,tRNA metabolic process; GO:0006400,tRNA modification; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008033,tRNA processing; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009451,RNA modification; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0032259,methylation; GO:0034470,ncRNA processing; GO:0034641,cellular nitrogen compound metabolic process; GO:0034660,ncRNA metabolic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043414,macromolecule methylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0034708,methyltransferase complex; GO:0043527,tRNA methyltransferase complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF04189.16:Gcd10p family","--","--","--"]
["MS01G01010",6.3538,6.2789,5.9674,3.0399,2.1449,3.177,1.6738,2.4165,1.7582,3.5225,3.8229,3.2646,2.4696,2.7201,2.9175,200,197,184,70,59,84,40,54,50,90,103,104,61,67,72,-0.626933155,0.001132961,0.003164676,false,-0.907237813,"1.26689E-05","4.1796E-05",false,-0.947825064,"3.75848E-05",0.000114856,false,-1.392090028,"3.23331E-08","1.48695E-07","down",-0.752308643,0.007494638,0.024280645,false,-0.467651685,0.112507986,0.25722352,false,-0.442159663,0.157697159,0.613916261,false,-0.305592036,0.23896424,0.419996956,false,-0.015843229,0.952980752,0.985105946,false,"chr_001",794528,797515,"+","MS01G01010","--","K17338 receptor expression-enhancing protein 1/2/3/4 | (RefSeq) putative HVA22-like protein g (A)","--","putative HVA22-like protein g [Malus domestica]","HA22I_ARATH RecName: Full=HVA22-like protein i; Short=AtHVA22i;","A0A540MGW0_MALBA RecName: Full=HVA22-like protein {ECO:0000256|RuleBase:RU362006};","HVA22/DP1 gene product-related proteins","--","PF03134.22:TB2/DP1, HVA22 family","--","--","--"]
["MS01G01040",3.5253,3.6428,4.8223,2.1203,1.3716,0.5456,1.2537,5.3133,3.0826,2.3453,1.6474,1.5674,1.3477,1.1263,0.8993,100,103,134,44,34,13,27,107,79,54,40,45,30,25,20,-0.919002694,0.001975118,0.005188982,false,-1.531947002,"9.04478E-07","3.56041E-06","down",-1.345911184,0.003593765,0.007549999,"down",-0.025412534,0.955341999,0.966517869,false,0.901651797,0.077668547,0.162475348,false,1.521508112,0.003019738,0.016382121,"up",1.318379026,0.032701197,0.342731384,false,-0.413143382,0.435586314,0.622827214,false,0.212756136,0.695771395,0.873432587,false,"chr_001",808431,810996,"-","MS01G01040","--","K22522 cytokinin riboside 5'-monophosphate phosphoribohydrolase [EC:3.2.2.-] | (RefSeq) cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like (A)","--","cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Malus domestica]","LOG3_ARATH RecName: Full=Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3; EC=3.2.2.n1; AltName: Full=Protein LONELY GUY 3;","A0A498HTK5_MALDO RecName: Full=Cytokinin riboside 5'-monophosphate phosphoribohydrolase {ECO:0000256|ARBA:ARBA00012205, ECO:0000256|RuleBase:RU363015}; EC=3.2.2.n1 {ECO:0000256|ARBA:ARBA00012205, ECO:0000256|RuleBase:RU363015};","--","GO:0005829,cytosol; GO:0005634,nucleus; GO:0016799,hydrolase activity, hydrolyzing N-glycosyl compounds; GO:0102682,N6-(Delta2-isopentenyl)-adenosine 5'-monophosphate phosphoribohydrolase activity; GO:0009691,cytokinin biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009308,amine metabolic process; GO:0009690,cytokinin metabolic process; GO:0009987,cellular process; GO:0010817,regulation of hormone levels; GO:0034754,cellular hormone metabolic process; GO:0042445,hormone metabolic process; GO:0042446,hormone biosynthetic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF03641.17:Possible lysine decarboxylase","--","--","--"]
["MS01G01070",4.572,5.6661,10.2954,5.6983,5.3856,8.9648,9.9188,4.9248,5.5071,24.684,24.3505,41.4541,23.9909,31.6193,33.1022,34,42,75,31,35,56,56,26,37,149,155,312,140,184,193,2.334521934,"7.51688E-11","7.12596E-10","up",2.408884699,"5.43457E-15","5.4285E-14","up",0.180066306,0.66692825,0.728647795,false,0.283274397,0.525679759,0.604054571,false,-2.04135009,"2.88145E-08","3.63134E-07","down",-2.115767345,"2.68653E-11","1.33713E-09","down",0.097268172,0.814612002,0.955085463,false,-2.135115125,"1.54747E-10","6.05905E-09","down",-2.201357469,"4.24847E-15","2.10284E-12","down","chr_001",861532,861849,"+","MS01G01070","--","K14488 SAUR family protein | (RefSeq) auxin-responsive protein SAUR50 (A)","ko04075: Plant hormone signal transduction","auxin-responsive protein SAUR50 [Malus domestica]","SAU51_ARATH RecName: Full=Protein SMALL AUXIN UP-REGULATED RNA 51 {ECO:0000303|PubMed:29258424};","A0A498HP26_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73298.1};","--","GO:0005886,plasma membrane; GO:0040008,regulation of growth; GO:0009737,response to abscisic acid; GO:0009733,response to auxin; GO:0008150,biological_process; GO:0040007,growth; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF02519.17:Auxin responsive protein","--","--","--"]
["MS01G01090",4.0077,3.0863,3.3155,0.955,0.5189,0.7587,0.3067,0.4661,1.2888,0.8154,1.4748,1.1747,0.7185,0.6108,0.5002,327,251,265,57,37,52,19,27,95,54,103,97,46,39,32,-1.407795565,"1.29844E-08","9.07099E-08","down",-2.215633634,"1.53962E-18","2.09373E-17","down",-2.019200463,"2.92826E-13","2.63428E-12","down",-2.066888723,"1.75562E-06","6.39757E-06","down",-0.643402219,0.207756767,0.343789823,false,0.1660131,0.748784895,0.858799918,false,-0.050256677,0.925359652,0.982196637,false,-0.592937497,0.090559678,0.215032837,false,0.221828748,0.535520077,0.782846131,false,"chr_001",874205,878813,"-","MS01G01090","--","--","--","hypothetical protein DVH24_012981 [Malus domestica]","FPP4_ARATH RecName: Full=Filament-like plant protein 4; Short=AtFPP4;","A0A498HUV9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73297.1};","--","GO:0008017,microtubule binding; GO:0046785,microtubule polymerization; GO:0010090,trichome morphogenesis; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0015631,tubulin binding; GO:0000226,microtubule cytoskeleton organization; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0007017,microtubule-based process; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0031109,microtubule polymerization or depolymerization; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0051258,protein polymerization; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0097435,supramolecular fiber organization; GO:0000902,cell morphogenesis; GO:0000904,cell morphogenesis involved in differentiation; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0010026,trichome differentiation; GO:0030154,cell differentiation; GO:0032502,developmental process; GO:0048468,cell development; GO:0048856,anatomical structure development; GO:0048869,cellular developmental process; GO:0090558,plant epidermis development; GO:0090626,plant epidermis morphogenesis","PF05911.14:Filament-like plant protein, long coiled-coil","--","--","--"]
["MS01G01130",12.653,8.6583,8.4122,5.6893,3.1379,4.4577,3.942,5.0783,7.7036,2.5552,2.8296,2.2969,2.785,1.7077,3.2668,909,620,592,299,197,269,215,259,500,149,174,167,157,96,184,-1.770520905,"5.79208E-15","8.6489E-14","down",-1.647968839,"2.93925E-09","1.60891E-08","down",-0.95600402,0.000610422,0.001494864,false,-0.559730464,0.043486349,0.070954801,false,1.225729011,"5.29756E-06","4.19756E-05","up",1.106857255,0.000431439,0.003315523,"up",0.399698731,0.193369217,0.650062866,false,0.829190555,0.001449791,0.008480369,false,0.715157806,0.022458985,0.125482392,false,"chr_001",922507,926980,"+","MS01G01130","--","K14486 auxin response factor | (RefSeq) auxin response factor 5 (A)","ko04075: Plant hormone signal transduction","hypothetical protein DVH24_012978 [Malus domestica]","ARFE_ARATH RecName: Full=Auxin response factor 5; AltName: Full=Auxin-responsive protein IAA24; AltName: Full=Transcription factor MONOPTEROS;","A0A498HSP0_MALDO RecName: Full=Auxin response factor {ECO:0000256|RuleBase:RU004561};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0042802,identical protein binding; GO:0000976,transcription cis-regulatory region binding; GO:0009734,auxin-activated signaling pathway; GO:0009793,embryo development ending in seed dormancy; GO:0009908,flower development; GO:0010305,leaf vascular tissue pattern formation; GO:0009942,longitudinal axis specification; GO:0048507,meristem development; GO:0006355,regulation of DNA-templated transcription; GO:0009733,response to auxin; GO:0048364,root development; GO:0010051,xylem and phloem pattern formation; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0005515,protein binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0048367,shoot system development; GO:0090567,reproductive shoot system development; GO:0003002,regionalization; GO:0007389,pattern specification process; GO:0000578,embryonic axis specification; GO:0009798,axis specification; GO:0009880,embryonic pattern specification; GO:0009888,tissue development; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0022622,root system development; GO:0099402,plant organ development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF06507.16:Auxin response factor","B3-ARF","TF","B3->B3-ARF"]
["MS01G01170",16.9261,16.3501,18.9963,7.2792,6.6459,9.1086,5.4725,4.6365,6.8333,10.6516,15.8436,13.6019,8.5385,9.8898,8.5833,1157,1114,1272,364,397,523,284,225,422,591,927,941,458,529,460,-0.200807113,0.211498428,0.297391989,false,-0.659246752,"7.8746E-07","3.12624E-06",false,-0.971769187,"5.83314E-10","3.62802E-09",false,-1.343535878,"2.28351E-15","2.21285E-14","down",-1.131106583,"4.08624E-08","5.00533E-07","down",-0.668488459,0.00031504,0.002552887,false,-0.373009484,0.063726962,0.445571677,false,-0.755444623,"9.95614E-05",0.00090964,false,-0.287581529,0.086281075,0.297825508,false,"chr_001",940863,945372,"-","MS01G01170","--","--","--","protein IQ-DOMAIN 32 isoform X1 [Malus domestica]","IQD32_ARATH RecName: Full=Protein IQ-DOMAIN 32 {ECO:0000303|PubMed:16368012}; Short=AtIQD32 {ECO:0000303|PubMed:16368012};","A0A498HVU2_MALDO RecName: Full=DUF4005 domain-containing protein {ECO:0000259|Pfam:PF13178};","--","GO:0009941,chloroplast envelope; GO:0005875,microtubule associated complex; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0005516,calmodulin binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009536,plastid; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005856,cytoskeleton; GO:0015630,microtubule cytoskeleton; GO:0032991,protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0016020,membrane; GO:0071944,cell periphery","PF00612.30:IQ calmodulin-binding motif","--","--","--"]
["MS01G01190",35.5973,42.8191,32.0921,12.6229,11.2867,12.5395,9.8641,10.0342,11.6812,10.4512,13.7046,10.9488,10.0349,11.308,11.2086,1754,2103,1549,455,486,519,369,351,520,418,578,546,388,436,433,-1.473781584,"6.60469E-17","1.19446E-15","down",-1.47393956,"2.13758E-19","3.0724E-18","down",-1.389019522,"1.32185E-15","1.50623E-14","down",-1.528310668,"1.56248E-18","1.92521E-17","down",-0.041367229,0.801758333,0.876484055,false,-0.037637775,0.79965625,0.88953784,false,-0.139449767,0.346832805,0.776518355,false,0.100904644,0.538168954,0.712502471,false,0.109896432,0.438727461,0.714281807,false,"chr_001",964376,972134,"-","MS01G01190","--","K20557 transcription factor VIP1 | (RefSeq) transcription factor VIP1-like (A)","ko04016: MAPK signaling pathway - plant","bZIP transcription factor 29-like isoform X2 [Malus sylvestris]","BZP29_ARATH RecName: Full=bZIP transcription factor 29 {ECO:0000303|PubMed:11906833}; Short=AtbZIP29 {ECO:0000303|PubMed:11906833}; AltName: Full=Protein DRINK ME-LIKE {ECO:0000303|PubMed:27402171};","A0A498HRB8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73290.1};","--","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0042803,protein homodimerization activity; GO:0043565,sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0040008,regulation of growth; GO:0006355,regulation of DNA-templated transcription; GO:0090567,reproductive shoot system development; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0040007,growth; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00170.24:bZIP transcription factor","bZIP","TF","bZIP"]
["MS01G01260",159.3707,142.9319,76.2409,19.3416,45.4626,17.3009,30.8935,34.216,32.0942,24.3871,12.9475,13.8772,19.0528,14.2963,22.27,4573,4088,2143,406,1140,417,673,697,832,568,318,403,429,321,501,-2.69107498,"7.05458E-15","1.04339E-13","down",-2.481624129,"8.35439E-18","1.0687E-16","down",-1.975289573,"3.35466E-06","1.22259E-05","down",-1.685115815,"1.3759E-09","7.49686E-09","down",1.022400648,0.00033313,0.001666297,"up",0.812424916,"4.79124E-05",0.000521761,false,0.28300056,0.461291306,0.835121392,false,0.738658695,0.090467428,0.21486771,false,0.536183505,0.173299437,0.442679365,false,"chr_001",1048587,1051821,"+","MS01G01260","--","--","--","hypothetical protein DVH24_012966 [Malus domestica]","LPAAT_ARATH RecName: Full=1-acylglycerol-3-phosphate O-acyltransferase; EC=2.3.1.51; AltName: Full=Lipid droplet-binding protein CGI-58 homolog;","A0A498HTI5_MALDO RecName: Full=AB hydrolase-1 domain-containing protein {ECO:0000259|Pfam:PF00561};","Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)","GO:0005737,cytoplasm; GO:0003841,1-acylglycerol-3-phosphate O-acyltransferase activity; GO:0052689,carboxylic ester hydrolase activity; GO:0016298,lipase activity; GO:0042171,lysophosphatidic acid acyltransferase activity; GO:0004623,phospholipase A2 activity; GO:0071456,cellular response to hypoxia; GO:0055089,fatty acid homeostasis; GO:0055088,lipid homeostasis; GO:0006654,phosphatidic acid biosynthetic process; GO:0055091,phospholipid homeostasis; GO:0070328,triglyceride homeostasis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008374,O-acyltransferase activity; GO:0016411,acylglycerol O-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0071617,lysophospholipid acyltransferase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0004620,phospholipase activity; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0006629,lipid metabolic process; GO:0006644,phospholipid metabolic process; GO:0006650,glycerophospholipid metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0008654,phospholipid biosynthetic process; GO:0009058,biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0045017,glycerolipid biosynthetic process; GO:0046473,phosphatidic acid metabolic process; GO:0046474,glycerophospholipid biosynthetic process; GO:0046486,glycerolipid metabolic process; GO:0071704,organic substance metabolic process; GO:0090407,organophosphate biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0055090,acylglycerol homeostasis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF00561.23:alpha/beta hydrolase fold","--","--","--"]
["MS01G01270",8.7255,4.3212,1.8585,0.3945,1.4227,0.5022,0.7019,0.8131,0.7618,0.5197,0.2594,0.2632,0.3395,0.1986,0.6796,393,194,82,13,56,19,24,26,31,19,10,12,12,7,24,-3.659337182,"1.32314E-10","1.21278E-09","down",-3.33688263,"5.56435E-09","2.9412E-08","down",-2.453731319,"9.40428E-05",0.000267695,"down",-2.441463212,"1.61173E-06","5.90067E-06","down",1.239334355,0.011379976,0.034214607,"up",0.911156334,0.081595705,0.204177407,false,0.004544271,0.993666316,0.998206474,false,1.225641594,0.069151601,0.176228251,false,0.912215862,0.184634935,0.457265112,false,"chr_001",1053966,1057199,"+","MS01G01270","--","K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) uncharacterized protein LOC103413440 isoform X1 (A)","ko04075: Plant hormone signal transduction","LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Malus domestica]","Y4361_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g36180; EC=2.7.11.1; Flags: Precursor;","A0A498HVT3_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0090406,pollen tube; GO:0005524,ATP binding; GO:0016301,kinase activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0004672,protein kinase activity; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery; GO:0042995,cell projection; GO:0120025,plasma membrane bounded cell projection","PF13855.9:Leucine rich repeat","--","--","--"]
["MS01G01290",1.321,1.4322,2.175,0.4077,0.5364,0.9385,0.3929,1.1405,0.849,0.63,1.0703,0.9473,0.6516,0.3812,0.5707,62,67,100,14,22,37,14,38,36,24,43,45,24,14,21,-0.708048512,0.037634453,0.069171272,false,-1.319771228,0.000500618,0.001250148,"down",-1.172534074,0.00417346,0.008642289,"down",-0.763178099,0.07355487,0.113000639,false,-0.040129844,0.932215618,0.959230488,false,0.573325137,0.259193172,0.451365719,false,0.414451105,0.436435988,0.823453774,false,-0.448074122,0.320266502,0.511317261,false,0.170692603,0.728590384,0.889107928,false,"chr_001",1066412,1070182,"+","MS01G01290","--","--","--","LOW QUALITY PROTEIN: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic [Malus domestica]","ARC6_ARATH RecName: Full=Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic {ECO:0000303|PubMed:12897262}; Short=AtARC6 {ECO:0000303|PubMed:23020316}; Flags: Precursor;","A0A540MGW9_MALBA RecName: Full=ARC6-like_IMS domain-containing protein {ECO:0000259|Pfam:PF13355};","--","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009706,chloroplast inner membrane; GO:0031357,integral component of chloroplast inner membrane; GO:0009536,plastid; GO:0042803,protein homodimerization activity; GO:0043621,protein self-association; GO:0010020,chloroplast fission; GO:0009658,chloroplast organization; GO:0009739,response to gibberellin; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0043572,plastid fission; GO:0048285,organelle fission; GO:0071840,cellular component organization or biogenesis; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009528,plastid inner membrane; GO:0016020,membrane; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031969,chloroplast membrane; GO:0042170,plastid membrane; GO:0016021,integral component of membrane; GO:0031224,intrinsic component of membrane; GO:0031300,intrinsic component of organelle membrane; GO:0031301,integral component of organelle membrane; GO:0031350,intrinsic component of plastid membrane; GO:0031351,integral component of plastid membrane; GO:0031352,intrinsic component of plastid inner membrane; GO:0031353,integral component of plastid inner membrane; GO:0031356,intrinsic component of chloroplast inner membrane","PF13355.9:ARC6-like, IMS domain","--","--","--"]
["MS01G01360",2.0002,1.7477,1.6466,1.5214,1.329,1.7475,2.0822,2.2267,2.0711,1.0135,1.093,1.0519,1.48,0.8039,1.3579,124,108,100,69,72,91,98,98,116,51,58,66,72,39,66,-0.588092478,0.014886068,0.031064062,false,-0.273510801,0.358396154,0.439086947,false,-0.021856716,0.927818799,0.943433951,false,0.522648003,0.020402323,0.036178644,false,1.123714234,"2.32317E-06","2.00706E-05","up",0.812946483,0.006000722,0.028400544,false,0.543227882,0.02017755,0.279746664,false,0.58314655,0.025022343,0.081896085,false,0.276557237,0.382639127,0.667302236,false,"chr_001",1094508,1099661,"-","MS01G01360","--","--","--","uncharacterized protein LOC126605685 [Malus sylvestris]","--","A0A498HP96_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73276.1};","Uncharacterized conserved protein","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF05277.15:Protein of unknown function (DUF726)","--","--","--"]
["MS01G01400",13.6911,5.6448,9.5729,22.8174,16.3107,21.8811,25.9389,18.4929,19.3061,9.9355,14.8997,12.9719,11.7113,17.9758,17.9413,73,30,50,89,76,98,105,70,93,43,68,70,49,75,75,0.567387846,0.137942015,0.209050264,false,1.007104925,0.007216813,0.014171188,"up",1.285537191,0.000506807,0.001259448,"up",1.425008912,0.000108519,0.000298323,"up",0.866339263,0.00266241,0.010077072,false,0.429863807,0.141303793,0.300399468,false,0.136933593,0.613540632,0.896285421,false,0.731448099,0.009244849,0.037825532,false,0.300554117,0.290191437,0.583160027,false,"chr_001",1154457,1154684,"-","MS01G01400","--","--","--","hypothetical protein C1H46_016507 [Malus baccata]","FB341_ARATH RecName: Full=F-box protein At5g49610;","A0A540MII8_MALBA RecName: Full=F-box domain-containing protein {ECO:0000259|PROSITE:PS50181};","--","GO:0016567,protein ubiquitination; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF12937.10:F-box-like","--","--","--"]
["MS01G01410",7.2897,7.8789,6.2142,2.8765,2.7089,2.863,2.9202,1.8525,1.7884,2.8239,4.2583,2.5989,2.8252,3.1213,3.6425,194,209,162,56,63,64,59,35,43,61,97,70,59,65,76,-0.966977699,0.000174117,0.000592302,false,-0.867987056,0.000157117,0.00043002,false,-1.128208369,"1.57192E-06","6.01273E-06","down",-1.423710628,"1.00403E-06","3.78773E-06","down",-0.445410767,0.20891768,0.345331139,false,-0.540520593,0.092867182,0.224309464,false,-0.298687738,0.359598427,0.784454253,false,-0.145990559,0.629046553,0.778244958,false,-0.234783152,0.373528482,0.659031299,false,"chr_001",1161647,1163162,"-","MS01G01410","--","--","--","B-box zinc finger protein 21 [Malus domestica]","BBX21_ARATH RecName: Full=B-box zinc finger protein 21 {ECO:0000303|PubMed:19920209}; Short=AtBBX21; AltName: Full=Protein LONG HYPOCOTYL UNDER SHADE {ECO:0000303|PubMed:21070414}; AltName: Full=Protein SALT TOLERANCE HOMOLOG 2;","A0A498HR97_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73270.1};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0008270,zinc ion binding; GO:0009640,photomorphogenesis; GO:0010117,photoprotection; GO:1905157,positive regulation of photosynthesis; GO:0006355,regulation of DNA-templated transcription; GO:0009641,shade avoidance; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009639,response to red or far red light; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0050896,response to stimulus; GO:0008152,metabolic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010109,regulation of photosynthesis; GO:0015979,photosynthesis; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0044237,cellular metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00643.27:B-box zinc finger","Others","TR","Others"]
["MS01G01440",62.0203,80.3231,79.217,25.0284,16.2994,27.8382,23.1786,20.8582,42.7984,25.8837,31.722,16.6835,20.1562,20.0611,13.2853,2090,2698,2615,617,480,788,593,499,1303,708,915,569,533,529,351,-1.390458628,"1.05196E-08","7.4423E-08","down",-1.753407154,"1.54371E-17","1.92715E-16","down",-1.473183504,"2.12658E-11","1.56788E-10","down",-1.080681412,"3.80733E-05",0.000113019,"down",0.322662446,0.319456938,0.471108596,false,0.691515179,0.019160904,0.069981402,false,0.395339089,0.194080634,0.650062866,false,-0.069503232,0.809686273,0.896748633,false,0.30483168,0.231179718,0.516552956,false,"chr_001",1194839,1197470,"-","MS01G01440","--","K01373 cathepsin F [EC:3.4.22.41] | (RefSeq) probable cysteine protease RD19C (A)","ko04626: Plant-pathogen interaction","probable cysteine protease RD19C [Malus domestica]","RD19C_ARATH RecName: Full=Probable cysteine protease RD19C {ECO:0000305}; EC=3.4.22.- {ECO:0000305}; AltName: Full=RD19-like protein 2 {ECO:0000303|PubMed:18708476}; Flags: Precursor;","A0A498HP87_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73266.1};","Cysteine proteinase Cathepsin F","GO:0005615,extracellular space; GO:0005764,lysosome; GO:0000323,lytic vacuole; GO:0000325,plant-type vacuole; GO:0005773,vacuole; GO:0004197,cysteine-type endopeptidase activity; GO:0051603,proteolysis involved in protein catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0019538,protein metabolic process; GO:0030163,protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00112.26:Papain family cysteine protease","--","--","--"]
["MS01G01460",15.0655,18.3092,21.0614,3.7677,3.6439,6.8173,3.137,2.0731,3.2877,31.1538,34.6391,24.933,17.1187,12.5502,22.0487,563,682,771,103,119,214,89,55,111,945,1108,943,502,367,646,0.925767508,"1.07599E-06","5.54433E-06",false,0.221275142,0.33525927,0.415503019,false,-1.73001551,"1.1115E-10","7.53633E-10","down",-2.391997195,"6.08815E-26","1.21477E-24","down",-3.3060406,"1.07502E-45","3.59258E-43","down",-2.598286972,"1.96409E-21","4.24627E-19","down",-0.665042354,0.038232407,0.365131129,false,-2.641088518,"1.01979E-22","2.56184E-20","down",-1.927059526,"1.81001E-10","2.75564E-08","down","chr_001",1220879,1224357,"+","MS01G01460","--","--","--","protein WALLS ARE THIN 1 [Malus domestica]","WAT1_ARATH RecName: Full=Protein WALLS ARE THIN 1;","A0A498HUL2_MALDO RecName: Full=WAT1-related protein {ECO:0000256|RuleBase:RU363077};","--","GO:0016021,integral component of membrane; GO:0000325,plant-type vacuole; GO:0009705,plant-type vacuole membrane; GO:0005886,plasma membrane; GO:0022857,transmembrane transporter activity; GO:0009851,auxin biosynthetic process; GO:0010315,auxin export across the plasma membrane; GO:0009734,auxin-activated signaling pathway; GO:0071555,cell wall organization; GO:0006952,defense response; GO:0009834,plant-type secondary cell wall biogenesis; GO:0090355,positive regulation of auxin metabolic process; GO:0090358,positive regulation of tryptophan metabolic process; GO:0000162,tryptophan biosynthetic process; GO:0009826,unidimensional cell growth; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009850,auxin metabolic process; GO:0009987,cellular process; GO:0010817,regulation of hormone levels; GO:0042445,hormone metabolic process; GO:0042446,hormone biosynthetic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0006810,transport; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009733,response to auxin; GO:0009755,hormone-mediated signaling pathway; GO:0009914,hormone transport; GO:0009966,regulation of signal transduction; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0010928,regulation of auxin mediated signaling pathway; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051716,cellular response to stimulus; GO:0055085,transmembrane transport; GO:0060918,auxin transport; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0140115,export across plasma membrane; GO:0140352,export from cell; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0006950,response to stress; GO:0009832,plant-type cell wall biogenesis; GO:0042546,cell wall biogenesis; GO:0044085,cellular component biogenesis; GO:0071669,plant-type cell wall organization or biogenesis; GO:0009893,positive regulation of metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0032350,regulation of hormone metabolic process; GO:0032352,positive regulation of hormone metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0090354,regulation of auxin metabolic process; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006521,regulation of cellular amino acid metabolic process; GO:0006568,tryptophan metabolic process; GO:0006576,cellular biogenic amine metabolic process; GO:0006586,indolalkylamine metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009072,aromatic amino acid family metabolic process; GO:0009308,amine metabolic process; GO:0010565,regulation of cellular ketone metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0033238,regulation of cellular amine metabolic process; GO:0033240,positive regulation of cellular amine metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042180,cellular ketone metabolic process; GO:0042430,indole-containing compound metabolic process; GO:0043436,oxoacid metabolic process; GO:0044106,cellular amine metabolic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0045764,positive regulation of cellular amino acid metabolic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0062012,regulation of small molecule metabolic process; GO:0062013,positive regulation of small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090357,regulation of tryptophan metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901605,alpha-amino acid metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009073,aromatic amino acid family biosynthetic process; GO:0009309,amine biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0042401,cellular biogenic amine biosynthetic process; GO:0042435,indole-containing compound biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044283,small molecule biosynthetic process; GO:0046219,indolalkylamine biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901607,alpha-amino acid biosynthetic process; GO:0000902,cell morphogenesis; GO:0009653,anatomical structure morphogenesis; GO:0016049,cell growth; GO:0032502,developmental process; GO:0040007,growth; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0060560,developmental growth involved in morphogenesis; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005774,vacuolar membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0071944,cell periphery","PF00892.23:EamA-like transporter family","--","--","--"]
["MS01G01520",5.4912,3.6337,3.2203,3.5136,1.3369,2.7818,2.0006,2.1395,1.6812,3.4545,5.0504,5.6566,2.3822,1.0452,3.4275,47,31,27,22,10,20,13,13,13,24,37,49,16,7,23,0.380647054,0.330011946,0.428554361,false,-0.560794995,0.279107973,0.355866883,false,-0.500671587,0.317374299,0.396398476,false,-0.810562301,0.08616553,0.129885806,false,-1.17871812,0.008209884,0.026150477,"down","NA","NA","NA","NA",-0.307286976,0.578555442,0.884217737,false,-0.864121826,0.071635313,0.180820881,false,0.084258177,0.890791117,0.960886838,false,"chr_001",1285800,1289171,"+","MS01G01520","--","K03671 thioredoxin 1 | (RefSeq) thioredoxin H-type 2-like (A)","--","thioredoxin H-type 2-like [Malus sylvestris]","TRXH2_TOBAC RecName: Full=Thioredoxin H-type 2; Short=Trx-H2;","A0A498HR88_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73260.1};","Thioredoxin","GO:0005737,cytoplasm; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF00085.23:Thioredoxin","--","--","--"]
["MS01G01530",6.4498,4.5007,7.2409,0.0926,0.1743,0.262,0.0669,0.2861,0.1124,0.8759,1.7404,0.5687,0.4746,0.3894,0.4102,381,265,419,4,9,13,3,12,6,42,88,34,22,18,19,-2.340232213,"4.54299E-10","3.89243E-09","down",-3.539694024,"5.75052E-32","1.88516E-30","down",-4.870179929,"1.52087E-34","6.88461E-33","down",-5.037223411,"1.49717E-31","4.11272E-30","down",-2.668922624,"4.59719E-05",0.000288528,"down",-1.464654431,0.021470265,0.076348836,false,"NA","NA","NA","NA",-2.5322002,"2.49578E-05",0.000275244,"down",-1.314655276,0.019575745,0.114668912,false,"chr_001",1289637,1294265,"-","MS01G01530","--","K12309 beta-galactosidase [EC:3.2.1.23] | (RefSeq) beta-galactosidase 17 (A)","ko00052: Galactose metabolism; ko00511: Other glycan degradation; ko00531: Glycosaminoglycan degradation; ko00600: Sphingolipid metabolism; ko00604: Glycosphingolipid biosynthesis - ganglio series; ko01100: Metabolic pathways","beta-galactosidase 5 [Malus domestica]","BGAL3_ARATH RecName: Full=Beta-galactosidase 3; Short=Lactase 3; EC=3.2.1.23; Flags: Precursor;","A0A540KAC4_MALBA RecName: Full=Beta-galactosidase {ECO:0000256|ARBA:ARBA00012756, ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|ARBA:ARBA00012756, ECO:0000256|RuleBase:RU000675};","Beta-galactosidase","GO:0048046,apoplast; GO:0009505,plant-type cell wall; GO:0005886,plasma membrane; GO:0005773,vacuole; GO:0004565,beta-galactosidase activity; GO:0030246,carbohydrate binding; GO:0005975,carbohydrate metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0015925,galactosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0005488,binding; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005618,cell wall; GO:0030312,external encapsulating structure; GO:0071944,cell periphery; GO:0016020,membrane; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01301.22:Glycosyl hydrolases family 35","--","--","--"]
["MS01G01560",1.0941,0.974,0.991,0.316,0.1763,0.2201,0.1827,0.2822,0.3411,2.7717,4.5727,3.4562,1.0997,2.9145,3.0661,71,63,63,15,10,12,9,13,20,146,254,227,56,148,156,1.998452996,"3.20391E-16","5.38341E-15","up",1.494018973,"5.25675E-05",0.000156489,"up",-1.904191752,"1.80331E-06","6.84422E-06","down",-1.637763058,"2.53753E-05","7.75226E-05","down",-3.621515535,"1.40179E-24","1.1851E-22","down",-3.118657126,"2.24911E-11","1.15045E-09","down","NA","NA","NA","NA",-3.888433827,"2.6804E-26","1.08698E-23","down",-3.3714632,"2.12701E-12","5.72392E-10","down","chr_001",1316354,1322731,"+","MS01G01560","--","K00279 cytokinin dehydrogenase [EC:1.5.99.12] | (RefSeq) cytokinin dehydrogenase 5-like (A)","ko00908: Zeatin biosynthesis; ko01110: Biosynthesis of secondary metabolites","cytokinin dehydrogenase 5-like [Malus domestica]","CKX5_ARATH RecName: Full=Cytokinin dehydrogenase 5; EC=1.5.99.12; AltName: Full=Cytokinin oxidase 5; Short=AtCKX5; Short=AtCKX6; Short=CKO5; Flags: Precursor;","A0A498HUK0_MALDO RecName: Full=Cytokinin dehydrogenase {ECO:0000256|ARBA:ARBA00011928}; EC=1.5.99.12 {ECO:0000256|ARBA:ARBA00011928};","Proteins containing the FAD binding domain","GO:0005576,extracellular region; GO:0005615,extracellular space; GO:0019139,cytokinin dehydrogenase activity; GO:0071949,FAD binding; GO:0016491,oxidoreductase activity; GO:0009823,cytokinin catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016645,oxidoreductase activity, acting on the CH-NH group of donors; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0050660,flavin adenine dinucleotide binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009308,amine metabolic process; GO:0009690,cytokinin metabolic process; GO:0009987,cellular process; GO:0010817,regulation of hormone levels; GO:0034754,cellular hormone metabolic process; GO:0042445,hormone metabolic process; GO:0042447,hormone catabolic process; GO:0044237,cellular metabolic process; GO:0046483,heterocycle metabolic process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF09265.13:Cytokinin dehydrogenase 1, FAD and cytokinin binding","--","--","--"]
["MS01G01570",15.1879,17.4516,22.1005,9.0509,6.1144,7.9688,6.5983,5.5427,6.3805,11.2876,13.4012,13.9881,8.9003,11.2447,9.6675,1046,1198,1491,456,368,461,345,271,397,631,790,975,481,606,522,-0.313261302,0.068981126,0.116450228,false,-0.581784623,0.00095155,0.00225298,false,-1.028633737,"1.26233E-06","4.90154E-06","down",-1.276308083,"3.14514E-12","2.27936E-11","down",-0.95114834,"5.55256E-10","9.41935E-09",false,-0.679790181,"4.34496E-05",0.00047961,false,-0.248787459,0.20421996,0.662046285,false,-0.699263561,0.000193533,0.001585235,false,-0.422781841,0.029388939,0.151048141,false,"chr_001",1322931,1328974,"-","MS01G01570","--","K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] | (RefSeq) uncharacterized protein LOC103450432 (A)","--","hypothetical protein DVH24_012938 [Malus domestica]","UBC18_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 18; EC=2.3.2.23; AltName: Full=E2 ubiquitin-conjugating enzyme 18; AltName: Full=Ubiquitin carrier protein 18;","A0A498HSJ9_MALDO RecName: Full=UBC core domain-containing protein {ECO:0000259|PROSITE:PS50127};","--","GO:0005634,nucleus; GO:0005524,ATP binding; GO:0061631,ubiquitin conjugating enzyme activity; GO:0000209,protein polyubiquitination; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004842,ubiquitin-protein transferase activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0061650,ubiquitin-like protein conjugating enzyme activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0016567,protein ubiquitination; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00590.23:Tetrapyrrole (Corrin/Porphyrin) Methylases","--","--","--"]
["MS01G01580",7.6038,6.9724,7.8124,4.4036,2.7694,3.4457,2.9078,2.8332,3.1494,2.7197,3.5725,3.3607,2.584,2.654,3.2746,465,425,468,197,148,177,135,123,174,135,187,208,124,127,157,-1.028415288,"1.51483E-10","1.38035E-09","down",-1.103297178,"1.1289E-10","7.27881E-10","down",-0.866207428,"4.79511E-05",0.000143588,false,-1.049075041,"1.03633E-10","6.42172E-10","down",-0.007631204,0.968386345,0.982127024,false,0.069761999,0.73069959,0.84762421,false,-0.183751815,0.431164244,0.819964236,false,0.180045334,0.452935352,0.63953719,false,0.261635515,0.281499804,0.572921035,false,"chr_001",1338931,1342331,"+","MS01G01580","--","--","--","BEL1-like homeodomain protein 3 [Malus domestica]","BLH3_ARATH RecName: Full=BEL1-like homeodomain protein 3; Short=BEL1-like protein 3;","A0A540KAB1_MALBA RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};","Transcription factor MEIS1 and related HOX domain proteins","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0048510,regulation of timing of transition from vegetative to reproductive phase; GO:0006357,regulation of transcription by RNA polymerase II; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0000977,RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000987,cis-regulatory region sequence-specific DNA binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0009888,tissue development; GO:0032502,developmental process; GO:0040034,regulation of development, heterochronic; GO:0048506,regulation of timing of meristematic phase transition; GO:0048507,meristem development; GO:0048509,regulation of meristem development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0065007,biological regulation; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF07526.14:Associated with HOX","HB-BELL","TF","HB->HB-BELL"]
["MS01G01640",35.1759,31.9368,33.4154,14.7628,13.0348,12.3365,11.5494,19.8486,18.6422,13.9702,13.5484,11.4838,14.1559,9.6609,10.1343,1368,1238,1273,420,443,403,341,548,655,441,451,452,432,294,309,-1.179178192,"2.52563E-15","3.90554E-14","down",-1.270110854,"3.32733E-11","2.26816E-10","down",-1.109070648,"9.87505E-13","8.41838E-12","down",-0.725965249,0.000955345,0.002225472,false,0.465684926,0.056508177,0.126436435,false,0.560912969,0.033790474,0.108068331,false,0.382467823,0.12678641,0.574004602,false,0.086823627,0.642385928,0.788285538,false,0.187629064,0.400642605,0.682209837,false,"chr_001",1369594,1371256,"-","MS01G01640","--","K25786 bZIP transcription factor 1/2/11/44/53 | (RefSeq) BZIP5; ocs element-binding factor 1 (A)","--","bZIP transcription factor 11-like [Malus sylvestris]","BZP44_ARATH RecName: Full=bZIP transcription factor 44 {ECO:0000305}; Short=AtbZIP44 {ECO:0000303|PubMed:11906833};","D9ZIP9_MALDO SubName: Full=BZIP domain class transcription factor {ECO:0000313|EMBL:ADL36602.1};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046982,protein heterodimerization activity; GO:0043565,sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0045893,positive regulation of DNA-templated transcription; GO:0009845,seed germination; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0005515,protein binding; GO:0046983,protein dimerization activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0090351,seedling development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00170.24:bZIP transcription factor","bZIP","TF","bZIP"]
["MS01G01720",2.1103,1.82,2.57,0.9616,1.1015,2.0275,1.2679,0.4172,0.9835,2.5999,4.6281,3.7313,2.878,3.4065,2.5028,57,49,68,19,26,46,26,8,24,57,107,102,61,72,53,0.935692432,0.001574861,0.004250499,false,0.729835049,0.010297451,0.019485926,false,-0.457498283,0.237354232,0.309117798,false,-0.993523675,0.023033735,0.040363646,false,-1.917014285,"8.69203E-06","6.5181E-05","down",-1.7079622,"3.95792E-05",0.000445959,"down",-0.537963272,0.3118432,0.75285985,false,-1.377329602,0.000377746,0.002788839,"down",-1.161527196,0.001693675,0.01991739,"down","chr_001",1445396,1446550,"-","MS01G01720","--","--","--","heavy metal-associated isoprenylated plant protein 2-like [Malus domestica]","HIP2_ARATH RecName: Full=Heavy metal-associated isoprenylated plant protein 2 {ECO:0000303|PubMed:21072340, ECO:0000303|PubMed:23368984}; Short=AtHIP02 {ECO:0000303|PubMed:21072340, ECO:0000303|PubMed:23368984}; Flags: Precursor;","A0A498HTE4_MALDO RecName: Full=Inositol-pentakisphosphate 2-kinase {ECO:0000256|ARBA:ARBA00012023, ECO:0000256|RuleBase:RU364126}; EC=2.7.1.158 {ECO:0000256|ARBA:ARBA00012023, ECO:0000256|RuleBase:RU364126};","Copper chaperone","GO:0046872,metal ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding","PF00403.29:Heavy-metal-associated domain","--","--","--"]
["MS01G01730",3.6359,2.2024,4.9955,1.9693,2.5644,2.9129,1.6566,1.2562,1.6452,4.3103,5.7705,5.3548,3.0307,5.4062,3.2958,159,96,214,63,98,107,55,39,65,153,216,237,104,185,113,0.698531247,0.019093274,0.038582148,false,0.410022513,0.224726691,0.295809831,false,-0.321263197,0.344755102,0.424509115,false,-0.95934752,0.00488203,0.009939802,false,-1.645635883,"5.16706E-12","1.17233E-10","down",-1.35529997,"1.23298E-05",0.000162555,"down",-0.642135412,0.025103314,0.305855283,false,-1.001644755,"2.45033E-05",0.000271497,"down",-0.705146539,0.021154178,0.120772711,false,"chr_001",1448173,1451483,"-","MS01G01730","--","K10572 inositol-pentakisphosphate 2-kinase [EC:2.7.1.158] | (RefSeq) LOW QUALITY PROTEIN: inositol-pentakisphosphate 2-kinase-like (A)","ko00562: Inositol phosphate metabolism; ko01100: Metabolic pathways; ko04070: Phosphatidylinositol signaling system","hypothetical protein C1H46_032484 [Malus baccata]","IPPK_ARATH RecName: Full=Inositol-pentakisphosphate 2-kinase; EC=2.7.1.158; AltName: Full=Inositol-1,3,4,5,6-pentakisphosphate 2-kinase; AltName: Full=Ins(1,3,4,5,6)P5 2-kinase; Short=AtIPK1; Short=InsP5 2-kinase;","A0A540L621_MALBA RecName: Full=Inositol-pentakisphosphate 2-kinase {ECO:0000256|ARBA:ARBA00012023, ECO:0000256|RuleBase:RU364126}; EC=2.7.1.158 {ECO:0000256|ARBA:ARBA00012023, ECO:0000256|RuleBase:RU364126};","Inositol polyphosphate kinase","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0005524,ATP binding; GO:0035299,inositol pentakisphosphate 2-kinase activity; GO:0032942,inositol tetrakisphosphate 2-kinase activity; GO:0046872,metal ion binding; GO:0030643,cellular phosphate ion homeostasis; GO:0042742,defense response to bacterium; GO:0050832,defense response to fungus; GO:0051607,defense response to virus; GO:0032958,inositol phosphate biosynthetic process; GO:0052746,inositol phosphorylation; GO:0048527,lateral root development; GO:0010264,myo-inositol hexakisphosphate biosynthetic process; GO:0055062,phosphate ion homeostasis; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0051765,inositol tetrakisphosphate kinase activity; GO:0043169,cation binding; GO:0006873,cellular ion homeostasis; GO:0008150,biological_process; GO:0009987,cellular process; GO:0019725,cellular homeostasis; GO:0030002,cellular anion homeostasis; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055081,anion homeostasis; GO:0055082,cellular chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0072502,cellular trivalent inorganic anion homeostasis; GO:0072506,trivalent inorganic anion homeostasis; GO:0098771,inorganic ion homeostasis; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0009620,response to fungus; GO:0009615,response to virus; GO:0140546,defense response to symbiont; GO:0006066,alcohol metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0019751,polyol metabolic process; GO:0043647,inositol phosphate metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046165,alcohol biosynthetic process; GO:0046173,polyol biosynthetic process; GO:0071704,organic substance metabolic process; GO:0090407,organophosphate biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0006020,inositol metabolic process; GO:0016310,phosphorylation; GO:0044238,primary metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0046835,carbohydrate phosphorylation; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048364,root development; GO:0048528,post-embryonic root development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0090696,post-embryonic plant organ development; GO:0099402,plant organ development; GO:0033517,myo-inositol hexakisphosphate metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF06090.15:Inositol-pentakisphosphate 2-kinase","--","--","--"]
["MS01G01740",27.7192,25.405,49.2541,10.6475,14.326,15.2046,7.7675,5.3749,13.1941,54.3907,80.6104,63.4081,44.0047,62.1422,38.9352,879,803,1530,247,397,405,187,121,378,1400,2188,2035,1095,1542,968,1.141597396,"1.39065E-05","5.83569E-05","up",0.802010466,0.003246969,0.006897211,false,-1.127989901,"7.94915E-05",0.000229343,"down",-1.680259424,"7.79122E-07","2.98197E-06","down",-2.808470227,"1.60758E-20","9.43493E-19","down",-2.464202369,"2.80162E-15","2.69737E-13","down",-0.553484316,0.090463122,0.51148006,false,-2.253146972,"4.41532E-26","1.71695E-23","down",-1.903001272,"1.94928E-15","1.10265E-12","down","chr_001",1460803,1462841,"+","MS01G01740","--","K08241 jasmonate O-methyltransferase [EC:2.1.1.141] | (RefSeq) jasmonate O-methyltransferase-like (A)","ko00592: alpha-Linolenic acid metabolism; ko01110: Biosynthesis of secondary metabolites","jasmonate O-methyltransferase-like [Malus domestica]","JMT2_THECC RecName: Full=Probable jasmonic acid carboxyl methyltransferase 2 {ECO:0000312|EMBL:EOY14825.1}; EC=2.1.1.141 {ECO:0000250|UniProtKB:Q9AR07};","A0A498HVP4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73241.1};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0046872,metal ion binding; GO:0030795,methyl jasmonate methylesterase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0032259,methylation; GO:0031408,oxylipin biosynthetic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0008168,methyltransferase activity; GO:0016740,transferase activity; GO:0016741,transferase activity, transferring one-carbon groups; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0006082,organic acid metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0031407,oxylipin metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF03492.18:SAM dependent carboxyl methyltransferase","--","--","--"]
["MS01G01810",2.6077,3.8895,2.5207,0.5363,0.6074,0.522,0.3648,0.5201,0.3831,0.6823,1.5907,0.9577,0.4411,0.4424,1.0596,113,168,107,17,23,19,12,16,15,24,59,42,15,15,36,-1.307994625,0.000253653,0.00082972,"down",-1.927949721,"1.31788E-06","5.05799E-06","down",-2.220378829,"3.04881E-10","1.95631E-09","down",-2.558264717,"1.27805E-11","8.69471E-11","down",-1.234250901,0.010348704,0.031605734,"down","NA","NA","NA","NA","NA","NA","NA","NA",-0.896360868,0.049189012,0.13669393,false,-0.266265717,0.605933693,0.825011798,false,"chr_001",1505981,1509334,"-","MS01G01810","--","K19355 mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] | (RefSeq) MAN2; mannan endo-1,4-beta-mannosidase 7-like precursor (A)","ko00051: Fructose and mannose metabolism; ko01100: Metabolic pathways","mannan endo-1,4-beta-mannosidase 7-like precursor [Malus domestica]","MAN7_ARATH RecName: Full=Mannan endo-1,4-beta-mannosidase 7; EC=3.2.1.78; AltName: Full=Beta-mannanase 7; AltName: Full=Endo-beta-1,4-mannanase 7; Short=AtMAN7; Flags: Precursor;","C7A7X8_MALDO RecName: Full=Mannan endo-1,4-beta-mannosidase {ECO:0000256|ARBA:ARBA00012706}; EC=3.2.1.78 {ECO:0000256|ARBA:ARBA00012706};","--","GO:0071944,cell periphery; GO:0005576,extracellular region; GO:0016985,mannan endo-1,4-beta-mannosidase activity; GO:0010047,fruit dehiscence; GO:1990059,fruit valve development; GO:0071704,organic substance metabolic process; GO:0009828,plant-type cell wall loosening; GO:0009845,seed germination; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0004567,beta-mannosidase activity; GO:0015923,mannosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0000003,reproduction; GO:0008150,biological_process; GO:0009900,dehiscence; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032504,multicellular organism reproduction; GO:0048609,multicellular organismal reproductive process; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0032502,developmental process; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0008152,metabolic process; GO:0009664,plant-type cell wall organization; GO:0009827,plant-type cell wall modification; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0042545,cell wall modification; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0090351,seedling development; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00150.21:Cellulase (glycosyl hydrolase family 5)","--","--","--"]
["MS01G01820",52.1659,47.5723,72.5162,20.6356,28.9065,18.2613,27.5809,43.6856,28.6345,18.8978,14.9696,11.3372,18.2292,11.0071,18.0511,1714,1558,2334,496,830,504,688,1019,850,504,421,377,470,283,465,-1.732850581,"3.5543E-12","3.92061E-11","down",-1.565839949,"9.13729E-11","5.94336E-10","down",-1.115279083,"1.79048E-05","5.76866E-05","down",-0.49220214,0.048537699,0.078261153,false,1.252026742,"1.13363E-05","8.28448E-05","up",1.088150381,"8.18633E-05",0.000816067,"up",0.618033053,0.036009643,0.356175309,false,0.635730389,0.031465028,0.097691979,false,0.478523567,0.100178589,0.32485919,false,"chr_001",1514106,1516923,"+","MS01G01820","--","K13082 bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [EC:1.1.1.219 1.1.1.234] | (RefSeq) bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase (A)","ko00941: Flavonoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Malus domestica]","DFRA_MALDO RecName: Full=Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase; AltName: Full=Dihydroflavonol 4-reductase; Short=DFR; EC=1.1.1.219 {ECO:0000269|PubMed:12667486}; AltName: Full=Dihydrokaempferol 4-reductase; AltName: Full=Flavanone 4-reductase; Short=FNR; EC=1.1.1.234 {ECO:0000269|PubMed:12667486};","C3UZH2_9ROSA SubName: Full=Dihydroflavonol-4-reductase protein {ECO:0000313|EMBL:ACP30362.1};","Flavonol reductase/cinnamoyl-CoA reductase","GO:0045552,dihydrokaempferol 4-reductase activity; GO:0047890,flavanone 4-reductase activity; GO:0009813,flavonoid biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process","PF01370.24:NAD dependent epimerase/dehydratase family","--","--","--"]
["MS01G01840",4.5504,4.2578,4.1418,1.4504,1.2227,1.6189,1.3286,1.6419,1.1827,1.8779,2.4791,1.794,1.5806,1.6615,1.563,609,568,543,142,143,182,135,156,143,204,284,243,166,174,164,-0.893259398,"2.33128E-07","1.33796E-06",false,-1.138949425,"9.73641E-14","8.64915E-13","down",-1.384372307,"5.77329E-16","6.80503E-15","down",-1.358503677,"1.4841E-11","1.00005E-10","down",-0.452909846,0.05681754,0.127014328,false,-0.204663381,0.348703566,0.545703431,false,0.025688892,0.91287446,0.979053598,false,-0.476067718,0.026935387,0.086553864,false,-0.220519049,0.245413047,0.533602043,false,"chr_001",1523028,1529934,"-","MS01G01840","--","--","--","hypothetical protein DVH24_012916 [Malus domestica]","AUL1_ARATH RecName: Full=Auxilin-like protein 1;","A0A498HTD4_MALDO RecName: Full=J domain-containing protein {ECO:0000259|PROSITE:PS50076};","Auxilin-like protein and related proteins containing DnaJ domain","GO:0005737,cytoplasm; GO:0043231,intracellular membrane-bounded organelle; GO:0031982,vesicle; GO:0030276,clathrin binding; GO:0072318,clathrin coat disassembly; GO:0072583,clathrin-dependent endocytosis; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0006810,transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0016192,vesicle-mediated transport; GO:0022411,cellular component disassembly; GO:0032984,protein-containing complex disassembly; GO:0043933,protein-containing complex organization; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051261,protein depolymerization; GO:0071840,cellular component organization or biogenesis; GO:0072319,vesicle uncoating; GO:0006897,endocytosis; GO:0006898,receptor-mediated endocytosis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle","PF00226.34:DnaJ domain","--","--","--"]
["MS01G01890",56.6291,51.3903,48.6124,17.5933,22.4226,14.0962,13.9434,26.4685,25.108,49.3119,30.4483,33.3178,38.7892,20.477,46.0052,1760,1592,1480,400,609,368,329,584,705,1244,810,1048,946,498,1121,-0.273406061,0.240366926,0.331007178,false,-0.281051164,0.301173442,0.379560522,false,-1.309426461,"1.61347E-08","8.23349E-08","down",-0.979082828,"7.58757E-05",0.000214532,false,-0.690097161,0.024467926,0.064432735,false,-0.680233284,0.04093182,0.124336583,false,0.328638691,0.294791915,0.738998542,false,-1.015807181,0.000565821,0.003897588,"down",-1.001112336,0.002475648,0.026331551,"down","chr_001",1554545,1556634,"-","MS01G01890","--","K23050 phenylcoumaran benzylic ether reductase [EC:1.3.1.-] | (RefSeq) LOW QUALITY PROTEIN: isoflavone reductase-like protein (A)","--","phenylcoumaran benzylic ether reductase Betv6 [Malus sylvestris]","EGS2_CLABR RecName: Full=Eugenol synthase 2 {ECO:0000303|PubMed:18208524}; Short=CbEGS2 {ECO:0000303|PubMed:18208524}; EC=1.1.1.318 {ECO:0000269|PubMed:18208524};","A0A1W5S341_MALDO SubName: Full=Phenylpropene reductase 3 {ECO:0000313|EMBL:ARA90567.1};","--","GO:0000166,nucleotide binding; GO:0016491,oxidoreductase activity; GO:0009699,phenylpropanoid biosynthetic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0036094,small molecule binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0006725,cellular aromatic compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009698,phenylpropanoid metabolic process; GO:0009987,cellular process; GO:0019438,aromatic compound biosynthetic process; GO:0019748,secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044550,secondary metabolite biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process","PF05368.16:NmrA-like family","--","--","--"]
["MS01G01920",2.9736,3.3792,2.6057,0.9353,0.9034,0.9398,0.5892,0.8155,0.5825,3.1771,4.8882,4.3941,1.8779,1.9505,1.4768,113,128,97,26,30,30,17,22,20,98,159,169,56,58,44,0.655999882,0.005775867,0.013534468,false,-0.464498693,0.07888734,0.119168177,false,-1.477011392,"5.77514E-07","2.35835E-06","down",-1.900319445,"1.18839E-08","5.79202E-08","down",-2.543072879,"9.2801E-15","2.92901E-13","down",-1.418780822,0.000117281,0.001110722,"down",-0.421991867,0.30283632,0.745704609,false,-2.115769951,"1.00157E-12","5.87429E-11","down",-0.986592666,0.002631421,0.027576046,false,"chr_001",1580230,1582306,"+","MS01G01920","--","K19600 tubby and related proteins | (RefSeq) tubby-like F-box protein 5 (A)","--","tubby-like F-box protein 5 [Malus domestica]","TLP5_ORYSJ RecName: Full=Tubby-like F-box protein 5; Short=OsTLP5; AltName: Full=Tubby-like F-box protein 8; Short=OsTLP8;","A0A5N5HJF6_9ROSA SubName: Full=Tubby-like F-box protein 5 {ECO:0000313|EMBL:KAB2628116.1};","Tub family proteins","--","PF01167.21:Tub family","TUB","TF","TUB"]
["MS01G01950",4.6705,3.6965,8.3703,0.0709,0.0594,0.1853,0.1367,0.2924,0.2872,1.6623,0.9094,0.6666,0.5291,0.3979,0.5295,90,71,158,1,1,3,2,4,5,26,15,13,8,6,8,-2.177296102,"3.5173E-06","1.66357E-05","down",-3.221326694,"3.07045E-11","2.10178E-10","down",-5.501059627,"1.30678E-12","1.09923E-11","down",-4.25238081,"8.50805E-13","6.52525E-12","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",1590657,1592877,"+","MS01G01950","--","--","--","protein RADIALIS-like 6 [Malus domestica]","RADL6_ARATH RecName: Full=Protein RADIALIS-like 6; Short=AtRL6; Short=Protein RAD-like 6; AltName: Full=Protein RADIALIS-LIKE SANT/MYB 3; Short=Protein RSM3;","A0A498HVM2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73221.1};","Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","--","--","--"]
["MS01G01970",3.2081,3.1371,3.2335,0,0,0.0483,0,0.1144,0,0.4002,0.5693,0.642,0.1553,0.0519,0.1036,79,77,78,0,0,1,0,2,0,8,12,16,3,1,2,-2.374703963,"1.363E-10","1.24699E-09","down",-4.652211419,"3.46882E-12","2.62647E-11","down",-7.264074233,"3.09504E-09","1.74799E-08","down",-6.255077833,"5.60405E-09","2.83297E-08","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",1602211,1603263,"-","MS01G01970","--","--","--","zinc-finger homeodomain protein 2-like [Malus domestica]","ZHD2_ARATH RecName: Full=Zinc-finger homeodomain protein 2; Short=AtZHD2; AltName: Full=Homeobox protein 22; Short=AtHB-22; AltName: Full=Protein MATERNAL EFFECT EMBRYO ARREST 68;","A0A498HNU6_MALDO RecName: Full=ZF-HD dimerization-type domain-containing protein {ECO:0000259|PROSITE:PS51523};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0042803,protein homodimerization activity; GO:0000976,transcription cis-regulatory region binding; GO:0009793,embryo development ending in seed dormancy; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0043167,ion binding; GO:0043169,cation binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF04770.15:ZF-HD protein dimerisation region","zf-HD","TF","zf-HD"]
["MS01G02110",12.6609,10.2223,11.551,35.3275,39.3154,35.2459,36.2835,40.8909,37.6947,31.2975,32.0859,34.436,42.5589,42.7485,35.9406,461,371,412,941,1251,1078,1003,1057,1240,925,1000,1269,1216,1218,1026,1.6929942,"2.54318E-32","1.44249E-30","up",2.109131843,"8.32606E-41","4.27699E-39","up",1.891805725,"7.25484E-30","2.48668E-28","up",2.022163509,"6.03248E-38","2.2979E-36","up",0.341840024,0.009835925,0.030346397,false,-0.072234042,0.634869718,0.784008204,false,0.127446475,0.431356366,0.820124321,false,0.217105757,0.14279712,0.295622947,false,-0.191040518,0.245063656,0.533311782,false,"chr_001",1694662,1697872,"+","MS01G02110","--","--","--","uncharacterized protein At1g01500-like [Malus sylvestris]","Y1015_ARATH RecName: Full=Uncharacterized protein At1g01500;","A0A5N5H0E9_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2619621.1};","--","GO:0016021,integral component of membrane; GO:0004617,phosphoglycerate dehydrogenase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G02170",14.1154,12.8077,15.7234,27.2122,23.0646,29.0368,27.1779,18.538,21.7585,23.9879,27.016,23.9356,21.7181,26.9784,21.5518,680,615,742,959,971,1175,994,634,947,938,1114,1167,821,1017,814,1.000034652,"2.74147E-14","3.79452E-13","up",1.013090783,"4.4064E-11","2.96608E-10","up",1.107433209,"6.8495E-14","6.59615E-13","up",0.948360172,"8.00494E-07","3.05748E-06",false,-0.040574096,0.827187656,0.892977398,false,-0.051012466,0.7960506,0.887375961,false,-0.162195817,0.398669187,0.804726188,false,0.123609716,0.366309045,0.557376439,false,0.119148721,0.453461921,0.724859209,false,"chr_001",1818226,1821421,"+","MS01G02170","--","K13510 lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [EC:2.3.1.23 2.3.1.67] | (RefSeq) LOW QUALITY PROTEIN: lysophospholipid acyltransferase LPEAT1-like (A)","ko00564: Glycerophospholipid metabolism; ko00565: Ether lipid metabolism; ko01100: Metabolic pathways","hypothetical protein DVH24_012876 [Malus domestica]","LPCT1_ARATH RecName: Full=Lysophospholipid acyltransferase LPEAT1 {ECO:0000303|PubMed:19445718}; EC=2.3.1.23 {ECO:0000269|PubMed:19445718, ECO:0000269|PubMed:28408542}; EC=2.3.1.51 {ECO:0000269|PubMed:19445718}; EC=2.3.1.n6 {ECO:0000269|PubMed:19445718}; EC=2.3.1.n7 {ECO:0000269|PubMed:19445718, ECO:0000269|PubMed:28408542}; AltName: Full=Lysophosphatidylethanolamine acyltransferase 1 {ECO:0000303|PubMed:19445718}; Short=AtLPEAT1 {ECO:0000303|PubMed:19445718};","A0A498HT89_MALDO RecName: Full=PlsC domain-containing protein {ECO:0000259|SMART:SM00563};","Predicted phosphate acyltransferase, contains PlsC domain","GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0003841,1-acylglycerol-3-phosphate O-acyltransferase activity; GO:0047184,1-acylglycerophosphocholine O-acyltransferase activity; GO:0106262,1-acylglycerophosphoethanolamine O-acyltransferase activity; GO:0106263,1-acylglycerophosphoserine O-acyltransferase activity; GO:0047159,1-alkenylglycerophosphocholine O-acyltransferase activity; GO:0042171,lysophosphatidic acid acyltransferase activity; GO:0071618,lysophosphatidylethanolamine acyltransferase activity; GO:0071617,lysophospholipid acyltransferase activity; GO:0050200,plasmalogen synthase activity; GO:0008654,phospholipid biosynthetic process; GO:0006644,phospholipid metabolic process; GO:0000038,very long-chain fatty acid metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008374,O-acyltransferase activity; GO:0016411,acylglycerol O-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0006629,lipid metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0019637,organophosphate metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0071704,organic substance metabolic process; GO:0090407,organophosphate biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006082,organic acid metabolic process; GO:0006631,fatty acid metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044281,small molecule metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment; GO:0031224,intrinsic component of membrane","PF01553.24:Acyltransferase","--","--","--"]
["MS01G02180",10.7896,11.024,12.8728,3.167,4.0903,5.398,3.7491,2.4243,3.5535,5.7493,11.5614,8.3064,6.7906,7.0211,6.5855,326,332,381,70,108,137,86,52,97,141,299,254,161,166,156,-0.259731374,0.289532653,0.385023326,false,-0.471701149,0.004097214,0.008505123,false,-1.239986185,"7.38094E-08","3.41486E-07","down",-1.547549048,"2.53525E-12","1.85773E-11","down",-1.278691708,"3.40093E-05",0.000221119,"down",-1.060672967,"7.02834E-06","9.969E-05","down",-0.310540686,0.300995576,0.74389454,false,-0.967051888,0.002059967,0.011299767,false,-0.742647077,0.002198814,0.024166028,false,"chr_001",1821653,1824115,"-","MS01G02180","--","K22763 deubiquitinase DESI2 [EC:3.4.19.12] | (RefSeq) deSI-like protein At4g17486 (A)","--","hypothetical protein C1H46_024309 [Malus baccata]","PPDEX_ARATH RecName: Full=DeSI-like protein At4g17486; EC=3.4.-.-;","A0A540LUG9_MALBA RecName: Full=PPPDE domain-containing protein {ECO:0000259|PROSITE:PS51858};","Uncharacterized conserved protein","GO:0101005,deubiquitinase activity; GO:0016579,protein deubiquitination; GO:0070646,protein modification by small protein removal; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0019783,ubiquitin-like protein peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF05903.17:PPPDE putative peptidase domain","--","--","--"]
["MS01G02190",27.116,33.6773,33.579,12.0481,11.0025,18.927,7.8876,4.0394,8.0752,21.1452,30.9896,32.626,23.6461,26.9999,20.9237,643,796,780,209,228,377,142,68,173,407,629,783,440,501,389,0.027284314,0.887029965,0.918870631,false,-0.104946558,0.527963121,0.606174559,false,-0.963364717,"2.72385E-05","8.49914E-05",false,-1.955748607,"6.19507E-14","5.31134E-13","down",-1.970373717,"1.01702E-11","2.22397E-10","down",-1.834886499,"9.52909E-12","5.21143E-10","down",-0.994315979,0.00182534,0.080408255,false,-0.974199237,0.000125058,0.001101466,false,-0.833431032,0.000371413,0.006197964,false,"chr_001",1829717,1831752,"-","MS01G02190","--","--","--","J domain-containing protein required for chloroplast accumulation response 1 isoform X2 [Malus domestica]","JAC1_ARATH RecName: Full=J domain-containing protein required for chloroplast accumulation response 1;","A0A540LUR0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD90146.1};","Auxilin-like protein and related proteins containing DnaJ domain","GO:0005737,cytoplasm; GO:0043231,intracellular membrane-bounded organelle; GO:0005739,mitochondrion; GO:0031982,vesicle; GO:0030276,clathrin binding; GO:0007015,actin filament organization; GO:0071483,cellular response to blue light; GO:0009904,chloroplast accumulation movement; GO:0009903,chloroplast avoidance movement; GO:0072318,clathrin coat disassembly; GO:0072583,clathrin-dependent endocytosis; GO:0080183,response to photooxidative stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0030029,actin filament-based process; GO:0030036,actin cytoskeleton organization; GO:0071840,cellular component organization or biogenesis; GO:0097435,supramolecular fiber organization; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009637,response to blue light; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071478,cellular response to radiation; GO:0071482,cellular response to light stimulus; GO:0104004,cellular response to environmental stimulus; GO:0009657,plastid organization; GO:0009658,chloroplast organization; GO:0009902,chloroplast relocation; GO:0019750,chloroplast localization; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051640,organelle localization; GO:0051641,cellular localization; GO:0051644,plastid localization; GO:0051649,establishment of localization in cell; GO:0051656,establishment of organelle localization; GO:0051667,establishment of plastid localization; GO:0006810,transport; GO:0016192,vesicle-mediated transport; GO:0022411,cellular component disassembly; GO:0032984,protein-containing complex disassembly; GO:0043933,protein-containing complex organization; GO:0051261,protein depolymerization; GO:0072319,vesicle uncoating; GO:0006897,endocytosis; GO:0006898,receptor-mediated endocytosis; GO:0006950,response to stress; GO:0006979,response to oxidative stress; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle","PF00226.34:DnaJ domain","--","--","--"]
["MS01G02200",18.7589,19.1904,16.5111,6.3602,4.9017,9.4956,5.0585,2.1846,5.477,14.7398,18.8097,16.9297,11.1999,16.0447,11.7749,254,259,219,63,58,108,52,21,67,162,218,232,119,170,125,0.072998713,0.678398662,0.755964226,false,-0.191820603,0.363018476,0.443792753,false,-1.189586473,"9.40482E-06","3.17862E-05","down",-1.814656096,"8.99943E-09","4.45479E-08","down",-1.873831315,"8.29492E-09","1.1539E-07","down",-1.607734684,"3.56973E-06","5.50642E-05","down",-0.627528716,0.12454114,0.570299979,false,-1.246265289,"4.26646E-06","5.91656E-05","down",-0.97393741,0.001004881,0.013501354,false,"chr_001",1832571,1833149,"-","MS01G02200","--","--","--","J domain-containing protein required for chloroplast accumulation response 1 isoform X2 [Malus domestica]","JAC1_ARATH RecName: Full=J domain-containing protein required for chloroplast accumulation response 1;","A0A540LUR0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD90146.1};","Auxilin-like protein and related proteins containing DnaJ domain","GO:0005737,cytoplasm; GO:0043231,intracellular membrane-bounded organelle; GO:0005739,mitochondrion; GO:0031982,vesicle; GO:0030276,clathrin binding; GO:0007015,actin filament organization; GO:0071483,cellular response to blue light; GO:0009904,chloroplast accumulation movement; GO:0009903,chloroplast avoidance movement; GO:0072318,clathrin coat disassembly; GO:0072583,clathrin-dependent endocytosis; GO:0080183,response to photooxidative stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0030029,actin filament-based process; GO:0030036,actin cytoskeleton organization; GO:0071840,cellular component organization or biogenesis; GO:0097435,supramolecular fiber organization; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009637,response to blue light; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071478,cellular response to radiation; GO:0071482,cellular response to light stimulus; GO:0104004,cellular response to environmental stimulus; GO:0009657,plastid organization; GO:0009658,chloroplast organization; GO:0009902,chloroplast relocation; GO:0019750,chloroplast localization; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051640,organelle localization; GO:0051641,cellular localization; GO:0051644,plastid localization; GO:0051649,establishment of localization in cell; GO:0051656,establishment of organelle localization; GO:0051667,establishment of plastid localization; GO:0006810,transport; GO:0016192,vesicle-mediated transport; GO:0022411,cellular component disassembly; GO:0032984,protein-containing complex disassembly; GO:0043933,protein-containing complex organization; GO:0051261,protein depolymerization; GO:0072319,vesicle uncoating; GO:0006897,endocytosis; GO:0006898,receptor-mediated endocytosis; GO:0006950,response to stress; GO:0006979,response to oxidative stress; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle","--","--","--","--"]
["MS01G02230",1.0746,1.1391,0.5796,0.4989,0.4408,0.5069,0.3205,1.3138,1.1446,0.4746,0.4501,0.581,0.3876,0.3628,0.2069,53,56,28,18,19,21,12,46,51,19,19,29,15,14,8,-0.706398572,0.09515249,0.153084236,false,-1.256469562,0.009726214,0.0185129,"down",-0.743432027,0.088880884,0.132290927,false,0.26339684,0.621608673,0.692227514,false,0.988367402,0.0728274,0.154650603,false,1.538105702,0.009933863,0.04225327,"up",1.010299382,0.068519855,0.45906305,false,-0.018851057,0.965530446,0.982524834,false,0.538723254,0.287124209,0.579773274,false,"chr_001",1843559,1846352,"-","MS01G02230","--","K15639 PHYB activation tagged suppressor 1 [EC:1.14.-.-] | (RefSeq) cytochrome P450 734A1 (A)","ko00905: Brassinosteroid biosynthesis; ko01110: Biosynthesis of secondary metabolites","hypothetical protein DVH24_012873 [Malus domestica]","C734A_ARATH RecName: Full=Cytochrome P450 734A1; EC=1.14.-.-; AltName: Full=Protein PHYB ACTIVATION-TAGGED SUPPRESSOR 1;","A0A498HQR3_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73189.1};","Cytochrome P450 CYP4/CYP19/CYP26 subfamilies","GO:0016021,integral component of membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0008395,steroid hydroxylase activity; GO:0010268,brassinosteroid homeostasis; GO:0016131,brassinosteroid metabolic process; GO:0040008,regulation of growth; GO:0009741,response to brassinosteroid; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0008150,biological_process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0055088,lipid homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0006629,lipid metabolic process; GO:0008152,metabolic process; GO:0008202,steroid metabolic process; GO:0010817,regulation of hormone levels; GO:0016128,phytosteroid metabolic process; GO:0042445,hormone metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:0040007,growth; GO:0050789,regulation of biological process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0014070,response to organic cyclic compound; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G02240",40.5052,37.7812,23.6344,16.8328,15.7075,21.9141,13.5534,14.4644,12.4163,21.1712,16.6772,15.0005,15.7999,25.0598,25.4688,1921,1786,1098,584,651,873,488,487,532,815,677,720,588,930,947,-0.759349761,0.003450215,0.008549163,false,-0.337719328,0.191425594,0.257791354,false,-0.701691284,0.005441284,0.010996275,false,-1.053891391,"1.5533E-05","4.91498E-05","down",-0.280524883,0.179605431,0.308624516,false,-0.702089823,0.001240567,0.007909572,false,-0.354135249,0.050179859,0.402606863,false,0.075540481,0.726468844,0.845278972,false,-0.34007874,0.132891928,0.381522506,false,"chr_001",1861176,1864497,"-","MS01G02240","--","K25869 zinc finger protein IDD1/2 | (RefSeq) zinc finger protein NUTCRACKER-like (A)","--","zinc finger protein NUTCRACKER-like [Malus domestica]","IDD2_ARATH RecName: Full=Zinc finger protein GAI-ASSOCIATED FACTOR 1 {ECO:0000303|PubMed:25035403}; AltName: Full=Protein indeterminate-domain 2 {ECO:0000303|PubMed:16784536};","D9ZIT6_MALDO SubName: Full=C2H2L domain class transcription factor {ECO:0000313|EMBL:ADL36639.1};","FOG: Zn-finger","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0010336,gibberellic acid homeostasis; GO:0009740,gibberellic acid mediated signaling pathway; GO:0009937,regulation of gibberellic acid mediated signaling pathway; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0043167,ion binding; GO:0043169,cation binding; GO:0008150,biological_process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0055088,lipid homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009739,response to gibberellin; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010476,gibberellin mediated signaling pathway; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0009966,regulation of signal transduction; GO:0010646,regulation of cell communication; GO:0023051,regulation of signaling; GO:0048583,regulation of response to stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00096.29:Zinc finger, C2H2 type","C2H2","TF","C2H2"]
["MS01G02270",15.2757,15.0982,13.3358,39.739,38.9663,42.6334,46.6196,37.7106,38.8867,26.1582,23.6664,28.2593,31.8082,33.2331,35.8574,877,864,750,1669,1955,2056,2032,1537,2017,1219,1163,1642,1433,1493,1614,1.024724096,"1.08606E-11","1.13207E-10","up",1.496910349,"2.92105E-30","8.70625E-29","up",1.685124981,"2.08353E-36","1.03953E-34","up",1.778845161,"5.03752E-27","1.06138E-25","up",0.767237979,"3.15371E-06","2.64964E-05",false,0.296385143,0.047337456,0.137935077,false,0.090636748,0.548854533,0.873873991,false,0.678785183,"7.78227E-07","1.32205E-05",false,0.213519273,0.06890325,0.259386158,false,"chr_001",1882223,1884677,"-","MS01G02270","--","--","--","hypothetical protein DVH24_012867 [Malus domestica]","Y1514_ARATH RecName: Full=Uncharacterized membrane protein At1g75140;","A0A498HW95_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73183.1};","--","GO:0005783,endoplasmic reticulum; GO:0016021,integral component of membrane; GO:0005739,mitochondrion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane","--","--","--","--"]
["MS01G02280",0.7828,0.5844,0.4274,0.1493,0.4999,0.1517,0.4076,0.4103,0.3828,0.0224,0.1914,0.1259,0.0928,0.0233,0.2322,43,32,23,6,24,7,17,16,19,1,9,7,4,1,10,-2.221339999,0.000608448,0.001817655,"down",-2.08095045,0.002424266,0.005286493,"down",-0.921968006,0.14343045,0.200785052,false,-0.303929295,0.497388845,0.577118493,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",1885499,1889363,"-","MS01G02280","--","--","--","protein IWS1 homolog [Malus domestica]","--","A0A540K6J0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD69838.1};","--","--","--","--","--","--"]
["MS01G02340",5.1314,5.3115,4.5731,1.2247,0.2796,0.8727,0.751,1.9504,0.9917,0.9031,1.3322,0.7243,0.519,0.7286,0.2078,63,65,55,11,3,9,7,17,11,9,14,9,5,7,2,-2.172818507,"1.33952E-07","8.00326E-07","down",-3.075931263,"5.00315E-09","2.66219E-08","down",-2.479563344,"7.28392E-07","2.92516E-06","down",-1.756626521,"8.85639E-05",0.000247026,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",1923004,1923710,"+","MS01G02340","--","K01520 dUTP diphosphatase [EC:3.6.1.23] | (RefSeq) deoxyuridine 5'-triphosphate nucleotidohydrolase (A)","ko00240: Pyrimidine metabolism; ko01100: Metabolic pathways; ko01232: Nucleotide metabolism","deoxyuridine 5'-triphosphate nucleotidohydrolase [Malus domestica]","DUT_ARATH RecName: Full=Deoxyuridine 5'-triphosphate nucleotidohydrolase; Short=dUTPase; EC=3.6.1.23; AltName: Full=dUTP pyrophosphatase; AltName: Full=dUTP-pyrophosphatase-like 1; Short=AtDUT1;","A0A498HNZ5_MALDO RecName: Full=Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|RuleBase:RU367024}; Short=dUTPase {ECO:0000256|RuleBase:RU367024}; EC=3.6.1.23 {ECO:0000256|RuleBase:RU367024}; AltName: Full=dUTP pyrophosphatase {ECO:0000256|RuleBase:RU367024};","dUTPase","GO:0004170,dUTP diphosphatase activity; GO:0042802,identical protein binding; GO:0000287,magnesium ion binding; GO:0006281,DNA repair; GO:0006226,dUMP biosynthetic process; GO:0046081,dUTP catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0047429,nucleoside triphosphate diphosphatase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006220,pyrimidine nucleotide metabolic process; GO:0006221,pyrimidine nucleotide biosynthetic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0009058,biosynthetic process; GO:0009117,nucleotide metabolic process; GO:0009123,nucleoside monophosphate metabolic process; GO:0009124,nucleoside monophosphate biosynthetic process; GO:0009129,pyrimidine nucleoside monophosphate metabolic process; GO:0009130,pyrimidine nucleoside monophosphate biosynthetic process; GO:0009157,deoxyribonucleoside monophosphate biosynthetic process; GO:0009162,deoxyribonucleoside monophosphate metabolic process; GO:0009165,nucleotide biosynthetic process; GO:0009176,pyrimidine deoxyribonucleoside monophosphate metabolic process; GO:0009177,pyrimidine deoxyribonucleoside monophosphate biosynthetic process; GO:0009219,pyrimidine deoxyribonucleotide metabolic process; GO:0009221,pyrimidine deoxyribonucleotide biosynthetic process; GO:0009262,deoxyribonucleotide metabolic process; GO:0009263,deoxyribonucleotide biosynthetic process; GO:0009265,2'-deoxyribonucleotide biosynthetic process; GO:0009394,2'-deoxyribonucleotide metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0019692,deoxyribose phosphate metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0046078,dUMP metabolic process; GO:0046385,deoxyribose phosphate biosynthetic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0072527,pyrimidine-containing compound metabolic process; GO:0072528,pyrimidine-containing compound biosynthetic process; GO:0090407,organophosphate biosynthetic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901293,nucleoside phosphate biosynthetic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006244,pyrimidine nucleotide catabolic process; GO:0009056,catabolic process; GO:0009141,nucleoside triphosphate metabolic process; GO:0009143,nucleoside triphosphate catabolic process; GO:0009147,pyrimidine nucleoside triphosphate metabolic process; GO:0009149,pyrimidine nucleoside triphosphate catabolic process; GO:0009166,nucleotide catabolic process; GO:0009211,pyrimidine deoxyribonucleoside triphosphate metabolic process; GO:0009213,pyrimidine deoxyribonucleoside triphosphate catabolic process; GO:0009223,pyrimidine deoxyribonucleotide catabolic process; GO:0009264,deoxyribonucleotide catabolic process; GO:0019439,aromatic compound catabolic process; GO:0034655,nucleobase-containing compound catabolic process; GO:0044248,cellular catabolic process; GO:0044270,cellular nitrogen compound catabolic process; GO:0046080,dUTP metabolic process; GO:0046386,deoxyribose phosphate catabolic process; GO:0046434,organophosphate catabolic process; GO:0046700,heterocycle catabolic process; GO:0072529,pyrimidine-containing compound catabolic process; GO:1901136,carbohydrate derivative catabolic process; GO:1901292,nucleoside phosphate catabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process","PF00692.22:dUTPase","--","--","--"]
["MS01G02370",1.1171,1.3448,0.8211,0.3054,0.1534,0.2128,0.0589,0.0629,0.0495,0.7707,1.0963,0.5298,0.2847,0.9136,0.5699,25,30,18,5,3,4,1,1,1,14,21,12,5,16,10,-0.283349259,0.566783696,0.659047179,false,-0.609446566,0.280018412,0.356873655,false,-2.098305202,0.001511661,0.003426661,"down",-3.997830914,"7.00854E-05",0.000199296,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",1934483,1935974,"-","MS01G02370","--","K19891 glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39] | (RefSeq) LOW QUALITY PROTEIN: glucan endo-1,3-beta-glucosidase 3-like (A)","ko00500: Starch and sucrose metabolism; ko01100: Metabolic pathways","glucan endo-1,3-beta-D-glucosidase-like isoform X1 [Malus domestica]","ALL9_OLEEU RecName: Full=Glucan endo-1,3-beta-D-glucosidase; EC=3.2.1.39; AltName: Full=Major pollen allergen Ole e 9; AltName: Allergen=Ole e 9; Flags: Precursor;","A0A540KDK1_MALBA RecName: Full=Glucan endo-1,3-beta-D-glucosidase {ECO:0000256|ARBA:ARBA00012780}; EC=3.2.1.39 {ECO:0000256|ARBA:ARBA00012780}; AltName: Full=(1->3)-beta-glucan endohydrolase {ECO:0000256|ARBA:ARBA00033335}; AltName: Full=Beta-1,3-endoglucanase {ECO:0000256|ARBA:ARBA00033417};","--","GO:0005576,extracellular region; GO:0042973,glucan endo-1,3-beta-D-glucosidase activity; GO:0042803,protein homodimerization activity; GO:0006076,(1->3)-beta-D-glucan catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0008422,beta-glucosidase activity; GO:0015926,glucosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0005488,binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0000272,polysaccharide catabolic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0006074,(1->3)-beta-D-glucan metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009251,glucan catabolic process; GO:0009987,cellular process; GO:0016052,carbohydrate catabolic process; GO:0043170,macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044247,cellular polysaccharide catabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0044275,cellular carbohydrate catabolic process; GO:0051273,beta-glucan metabolic process; GO:0051275,beta-glucan catabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00332.21:Glycosyl hydrolases family 17","--","--","--"]
["MS01G02380",0.5845,0.5413,0.3672,0.1844,0.1715,0.2498,0.0987,0.19,0.1327,0.2216,0.0876,0.074,0.0764,0.2107,0.0574,39,36,24,9,10,14,5,9,8,12,5,5,4,11,3,-1.790620906,0.002376082,0.006125411,"down",-1.831011292,0.002648514,0.005731074,"down",-1.094666744,0.024472088,0.042428732,"down",-1.555803597,0.004297926,0.008844998,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",1939046,1942646,"-","MS01G02380","--","--","--","uncharacterized protein LOC126604167 isoform X2 [Malus sylvestris]","--","A0A498HUB1_MALDO RecName: Full=Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612};","--","GO:0016021,integral component of membrane; GO:0097367,carbohydrate derivative binding; GO:0042973,glucan endo-1,3-beta-D-glucosidase activity; GO:0004347,glucose-6-phosphate isomerase activity; GO:0006094,gluconeogenesis; GO:0006096,glycolytic process; GO:0010468,regulation of gene expression; GO:0003674,molecular_function; GO:0005488,binding; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0008422,beta-glucosidase activity; GO:0015926,glucosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016853,isomerase activity; GO:0016860,intramolecular oxidoreductase activity; GO:0016861,intramolecular oxidoreductase activity, interconverting aldoses and ketoses; GO:0005975,carbohydrate metabolic process; GO:0005996,monosaccharide metabolic process; GO:0006006,glucose metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0016051,carbohydrate biosynthetic process; GO:0019318,hexose metabolic process; GO:0019319,hexose biosynthetic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046364,monosaccharide biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0006082,organic acid metabolic process; GO:0006090,pyruvate metabolic process; GO:0006091,generation of precursor metabolites and energy; GO:0006139,nucleobase-containing compound metabolic process; GO:0006163,purine nucleotide metabolic process; GO:0006165,nucleoside diphosphate phosphorylation; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006757,ATP generation from ADP; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009056,catabolic process; GO:0009117,nucleotide metabolic process; GO:0009132,nucleoside diphosphate metabolic process; GO:0009135,purine nucleoside diphosphate metabolic process; GO:0009141,nucleoside triphosphate metabolic process; GO:0009144,purine nucleoside triphosphate metabolic process; GO:0009150,purine ribonucleotide metabolic process; GO:0009179,purine ribonucleoside diphosphate metabolic process; GO:0009185,ribonucleoside diphosphate metabolic process; GO:0009199,ribonucleoside triphosphate metabolic process; GO:0009205,purine ribonucleoside triphosphate metabolic process; GO:0009259,ribonucleotide metabolic process; GO:0009987,cellular process; GO:0016052,carbohydrate catabolic process; GO:0016310,phosphorylation; GO:0019637,organophosphate metabolic process; GO:0019693,ribose phosphate metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0046031,ADP metabolic process; GO:0046034,ATP metabolic process; GO:0046483,heterocycle metabolic process; GO:0046939,nucleotide phosphorylation; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0072521,purine-containing compound metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901575,organic substance catabolic process; GO:0010467,gene expression; GO:0019222,regulation of metabolic process; GO:0043170,macromolecule metabolic process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF14383.9:DUF761-associated sequence motif","--","--","--"]
["MS01G02390",30.2828,31.4562,19.848,7.1936,5.2286,5.8147,5.8939,5.3709,7.3246,4.3481,4.97,5.8535,4.5779,5.2754,5.225,961,995,617,167,145,155,142,121,210,112,135,188,114,131,130,-2.244770889,"8.29401E-21","2.14058E-19","down",-2.149404833,"7.40651E-21","1.17616E-19","down",-1.953731372,"2.18829E-14","2.21777E-13","down",-1.858754592,"1.93711E-14","1.73372E-13","down",0.401076577,0.065480464,0.142041853,false,0.308845743,0.139965055,0.298562627,false,0.09677296,0.670421627,0.914612235,false,0.307648735,0.181326604,0.348592599,false,0.219059102,0.314907109,0.606590984,false,"chr_001",1949229,1950718,"-","MS01G02390","--","K14503 brassinosteroid resistant 1/2 | (RefSeq) protein BRASSINAZOLE-RESISTANT 1-like (A)","ko04075: Plant hormone signal transduction","hypothetical protein C1H46_042155 [Malus baccata]","BZR1_ARATH RecName: Full=Protein BRASSINAZOLE-RESISTANT 1 {ECO:0000303|PubMed:11970900}; AltName: Full=Protein BIN2 SUBSTRATE 2 {ECO:0000303|PubMed:12427989};","A0A540KDN7_MALBA RecName: Full=BES1_N domain-containing protein {ECO:0000259|Pfam:PF05687};","--","GO:0005829,cytosol; GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0009742,brassinosteroid mediated signaling pathway; GO:0045892,negative regulation of DNA-templated transcription; GO:0048481,plant ovule development; GO:0040008,regulation of growth; GO:0006355,regulation of DNA-templated transcription; GO:0048316,seed development; GO:0006351,DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009741,response to brassinosteroid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0014070,response to organic cyclic compound; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0043401,steroid hormone mediated signaling pathway; GO:0048545,response to steroid hormone; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071367,cellular response to brassinosteroid stimulus; GO:0071383,cellular response to steroid hormone stimulus; GO:0071396,cellular response to lipid; GO:0071407,cellular response to organic cyclic compound; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0035670,plant-type ovary development; GO:0048367,shoot system development; GO:0048437,floral organ development; GO:0048438,floral whorl development; GO:0048440,carpel development; GO:0048467,gynoecium development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0099402,plant organ development; GO:0040007,growth; GO:0010154,fruit development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF05687.16:BES1/BZR1 plant transcription factor, N-terminal","BES1","TF","BES1"]
["MS01G02420",13.7972,13.8086,15.1079,2.4203,1.8732,4.6532,2.4642,2.9646,2.6254,9.1369,12.0992,9.8366,7.28,8.2397,6.4342,413,412,443,53,49,117,56,63,71,222,310,298,171,193,151,-0.275654074,0.077090714,0.1279189,false,-0.666788414,"6.69374E-05",0.000195717,false,-2.055579452,"2.70545E-11","1.97125E-10","down",-2.126558757,"1.25207E-27","2.73489E-26","down",-1.837707684,"9.8646E-17","3.87051E-15","down",-1.443220986,"6.23662E-10","2.33856E-08","down",-0.065535249,0.859738959,0.968036803,false,-1.765668972,"6.75217E-08","1.48931E-06","down",-1.365238036,"3.7413E-05",0.00099671,"down","chr_001",1981611,1985060,"+","MS01G02420","--","--","--","uncharacterized protein LOC103440437 [Malus domestica]","--","A0A498HQP3_MALDO RecName: Full=SAP30_Sin3_bdg domain-containing protein {ECO:0000259|Pfam:PF13867};","--","GO:0005634,nucleus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13867.9:Sin3 binding region of histone deacetylase complex subunit SAP30","--","--","--"]
["MS01G02470",63.8471,59.7866,63.9732,3.4385,7.4269,1.4418,4.9903,8.4424,4.8809,11.7835,2.2494,2.8229,5.0655,2.8573,5.6245,2056,1919,2018,81,209,39,122,193,142,308,62,92,128,72,142,-3.25202823,"2.1843E-05","8.85623E-05","down",-3.49764946,"3.88837E-52","3.12945E-50","down",-3.683709795,"5.55662E-15","5.96646E-14","down",-3.070759397,"9.27993E-37","3.35453E-35","down",0.203581979,0.730366275,0.826137236,false,0.444140446,0.196382059,0.376296962,false,0.608505499,0.264529669,0.716850449,false,-0.406088854,0.682344998,0.816674902,false,-0.155388893,0.774960262,0.911729565,false,"chr_001",2030209,2031585,"-","MS01G02470","--","--","--","elongation of fatty acids protein 3-like [Pyrus x bretschneideri]","ELO3L_ARATH RecName: Full=Elongation of fatty acids protein 3-like; Short=Protein ELO3-like; EC=2.3.1.-; AltName: Full=Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 3; AltName: Full=Very long-chain fatty acid condensing enzyme HOS3; Short=VLCFA condensing enzyme HOS3;","A0A498HVG4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73161.1};","Fatty acyl-CoA elongase/Polyunsaturated fatty acid specific elongation enzyme","GO:0030176,integral component of endoplasmic reticulum membrane; GO:0009922,fatty acid elongase activity; GO:0071215,cellular response to abscisic acid stimulus; GO:0030497,fatty acid elongation; GO:0034625,fatty acid elongation, monounsaturated fatty acid; GO:0034626,fatty acid elongation, polyunsaturated fatty acid; GO:0019367,fatty acid elongation, saturated fatty acid; GO:0030148,sphingolipid biosynthetic process; GO:0042761,very long-chain fatty acid biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004312,fatty acid synthase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0019368,fatty acid elongation, unsaturated fatty acid; GO:0006643,membrane lipid metabolic process; GO:0006665,sphingolipid metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0046467,membrane lipid biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:0000038,very long-chain fatty acid metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0031090,organelle membrane; GO:0031224,intrinsic component of membrane; GO:0031227,intrinsic component of endoplasmic reticulum membrane; GO:0031300,intrinsic component of organelle membrane; GO:0031301,integral component of organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity","PF01151.21:GNS1/SUR4 family","--","--","--"]
["MS01G02500",11.2297,10.2878,8.9296,0,0.1691,0.2111,0.2335,0.1665,0.0327,2.5121,0.7941,0.3212,0.3389,0.5665,0.6031,380,347,296,0,5,6,6,4,1,69,23,11,9,15,16,-2.863923579,"3.06434E-07","1.72748E-06","down",-4.046998224,"7.72808E-39","3.65223E-37","down",-6.052472477,"9.46057E-34","4.06627E-32","down",-5.920709486,"5.48261E-33","1.63435E-31","down",-2.995373547,0.001323783,0.005533165,"down","NA","NA","NA","NA","NA","NA","NA","NA",-3.218015573,0.001147556,0.006983597,"down","NA","NA","NA","NA","chr_001",2040546,2041992,"+","MS01G02500","--","K20893 probable galacturonosyltransferase-like 1 [EC:2.4.1.-] | (RefSeq) probable galacturonosyltransferase-like 1 (A)","--","probable galacturonosyltransferase-like 1 [Malus sylvestris]","GATL1_ARATH RecName: Full=Probable galacturonosyltransferase-like 1; EC=2.4.1.-; AltName: Full=Protein GAOLAOZHUANGREN 1; AltName: Full=Protein PARVUS;","A0A498HNN8_MALDO RecName: Full=Hexosyltransferase {ECO:0000256|RuleBase:RU362027}; EC=2.4.1.- {ECO:0000256|RuleBase:RU362027};","--","GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0016021,integral component of membrane; GO:0047262,polygalacturonate 4-alpha-galacturonosyltransferase activity; GO:0052386,cell wall thickening; GO:0010417,glucuronoxylan biosynthetic process; GO:0048366,leaf development; GO:0032504,multicellular organism reproduction; GO:0045489,pectin biosynthetic process; GO:0010051,xylem and phloem pattern formation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0042545,cell wall modification; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071840,cellular component organization or biogenesis; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010410,hemicellulose metabolic process; GO:0010413,glucuronoxylan metabolic process; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0042546,cell wall biogenesis; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044038,cell wall macromolecule biosynthetic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0045491,xylan metabolic process; GO:0045492,xylan biosynthetic process; GO:0070589,cellular component macromolecule biosynthetic process; GO:0070592,cell wall polysaccharide biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:0000003,reproduction; GO:0010393,galacturonan metabolic process; GO:0045488,pectin metabolic process; GO:0003002,regionalization; GO:0007389,pattern specification process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment; GO:0031224,intrinsic component of membrane","PF01501.23:Glycosyl transferase family 8","--","--","--"]
["MS01G02540",6.5021,5.5438,5.1626,14.4399,13.5625,15.3186,17.0774,13.642,13.27,10.2716,12.3184,13.6207,14.4818,13.9985,13.7225,333,283,259,541,607,659,664,496,614,427,540,706,582,561,551,1.256006442,"1.27589E-12","1.47627E-11","up",1.585150959,"4.43525E-23","8.198E-22","up",1.543046943,"1.34842E-20","2.37096E-19","up",1.638133506,"1.90767E-16","2.01538E-15","up",0.394374091,0.035436321,0.087348501,false,0.06692629,0.696227521,0.826223431,false,0.091806027,0.598796534,0.890523372,false,0.304156431,0.04771472,0.133472383,false,-0.016776105,0.898823644,0.964446956,false,"chr_001",2084548,2087945,"+","MS01G02540","--","K11968 ariadne-1 [EC:2.3.2.31] | (RefSeq) probable E3 ubiquitin-protein ligase ARI2 (A)","--","probable E3 ubiquitin-protein ligase ARI2 [Malus sylvestris]","ARI2_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI2; EC=2.3.2.31 {ECO:0000250|UniProtKB:Q9Y4X5}; AltName: Full=ARIADNE-like protein ARI2; AltName: Full=Protein ariadne homolog 2; AltName: Full=RING-type E3 ubiquitin transferase ARI2 {ECO:0000305};","A0A540K7J3_MALBA RecName: Full=RBR-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012251}; EC=2.3.2.31 {ECO:0000256|ARBA:ARBA00012251};","Predicted E3 ubiquitin ligase","GO:0005737,cytoplasm; GO:0000151,ubiquitin ligase complex; GO:0046872,metal ion binding; GO:0031624,ubiquitin conjugating enzyme binding; GO:0061630,ubiquitin protein ligase activity; GO:0032436,positive regulation of proteasomal ubiquitin-dependent protein catabolic process; GO:0000209,protein polyubiquitination; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0044390,ubiquitin-like protein conjugating enzyme binding; GO:0003824,catalytic activity; GO:0004842,ubiquitin-protein transferase activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0061659,ubiquitin-like protein ligase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009893,positive regulation of metabolic process; GO:0009894,regulation of catabolic process; GO:0009896,positive regulation of catabolic process; GO:0009987,cellular process; GO:0010498,proteasomal protein catabolic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030162,regulation of proteolysis; GO:0030163,protein catabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031329,regulation of cellular catabolic process; GO:0031331,positive regulation of cellular catabolic process; GO:0032434,regulation of proteasomal ubiquitin-dependent protein catabolic process; GO:0042176,regulation of protein catabolic process; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0045732,positive regulation of protein catabolic process; GO:0045862,positive regulation of proteolysis; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051247,positive regulation of protein metabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0061136,regulation of proteasomal protein catabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901800,positive regulation of proteasomal protein catabolic process; GO:1903050,regulation of proteolysis involved in protein catabolic process; GO:1903052,positive regulation of proteolysis involved in protein catabolic process; GO:2000058,regulation of ubiquitin-dependent protein catabolic process; GO:2000060,positive regulation of ubiquitin-dependent protein catabolic process; GO:0016567,protein ubiquitination; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:0070647,protein modification by small protein conjugation or removal; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF19422.2:Ariadne domain","--","--","--"]
["MS01G02560",6.0776,6.781,6.2599,12.5178,10.51,12.3942,11.631,6.5263,10.1661,7.8904,10.189,10.206,8.4397,12.1901,9.9767,223,248,225,336,337,382,324,170,337,235,320,379,243,350,287,0.749200953,"7.87178E-06","3.48075E-05",false,0.96878357,"2.43995E-07","1.03584E-06",false,1.101154143,"1.67677E-11","1.25173E-10","up",0.848710085,0.000462812,0.001140544,false,0.112971051,0.649099902,0.766570982,false,-0.105221639,0.680570947,0.815830185,false,-0.255271748,0.293046912,0.737929105,false,0.369007836,0.032112403,0.099146031,false,0.157313371,0.414489699,0.694776577,false,"chr_001",2108124,2109692,"+","MS01G02560","--","K11968 ariadne-1 [EC:2.3.2.31] | (RefSeq) probable E3 ubiquitin-protein ligase ARI8 (A)","--","probable E3 ubiquitin-protein ligase ARI8 [Malus sylvestris]","ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; EC=2.3.2.31 {ECO:0000250|UniProtKB:Q9Y4X5}; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8; AltName: Full=RING-type E3 ubiquitin transferase ARI8 {ECO:0000305};","A0A5N5H2X3_9ROSA RecName: Full=RBR-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012251}; EC=2.3.2.31 {ECO:0000256|ARBA:ARBA00012251};","Predicted E3 ubiquitin ligase","GO:0005737,cytoplasm; GO:0000151,ubiquitin ligase complex; GO:0046872,metal ion binding; GO:0031624,ubiquitin conjugating enzyme binding; GO:0061630,ubiquitin protein ligase activity; GO:0004842,ubiquitin-protein transferase activity; GO:0032436,positive regulation of proteasomal ubiquitin-dependent protein catabolic process; GO:0000209,protein polyubiquitination; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0044390,ubiquitin-like protein conjugating enzyme binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0061659,ubiquitin-like protein ligase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009893,positive regulation of metabolic process; GO:0009894,regulation of catabolic process; GO:0009896,positive regulation of catabolic process; GO:0009987,cellular process; GO:0010498,proteasomal protein catabolic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030162,regulation of proteolysis; GO:0030163,protein catabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031329,regulation of cellular catabolic process; GO:0031331,positive regulation of cellular catabolic process; GO:0032434,regulation of proteasomal ubiquitin-dependent protein catabolic process; GO:0042176,regulation of protein catabolic process; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0045732,positive regulation of protein catabolic process; GO:0045862,positive regulation of proteolysis; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051247,positive regulation of protein metabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0061136,regulation of proteasomal protein catabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901800,positive regulation of proteasomal protein catabolic process; GO:1903050,regulation of proteolysis involved in protein catabolic process; GO:1903052,positive regulation of proteolysis involved in protein catabolic process; GO:2000058,regulation of ubiquitin-dependent protein catabolic process; GO:2000060,positive regulation of ubiquitin-dependent protein catabolic process; GO:0016567,protein ubiquitination; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:0070647,protein modification by small protein conjugation or removal; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF01485.24:IBR domain, a half RING-finger domain","--","--","--"]
["MS01G02580",41.9621,28.7948,20.621,1.1919,11.4327,0.4758,4.1633,8.9558,4.1018,18.8435,0.9762,0.6103,2.9168,1.4857,1.9463,1155,790,556,24,275,11,87,175,102,421,23,17,63,32,42,-1.920750506,0.164998845,0.24295965,false,-3.556825604,"1.09115E-26","2.6224E-25","down",-2.542072916,0.040575558,0.06642759,false,-2.124079519,"1.68524E-08","8.04276E-08","down",-0.180376127,1,1,false,1.44718006,0.000504421,0.003755405,"up",0.406305575,1,1,false,-0.589665883,1,1,false,1.050596783,0.40175175,0.683133244,false,"chr_001",2114217,2115800,"-","MS01G02580","--","--","--","uncharacterized protein LOC126602352 [Malus sylvestris]","--","A0A540KN81_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD75619.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF03350.19:Uncharacterized protein family, UPF0114","--","--","--"]
["MS01G02590",10.608,10.8408,13.4523,1.7113,1.6964,3.1376,2.0395,3.898,3.2454,1.9482,3.156,2.1158,1.6793,1.4735,1.5547,322,328,400,38,45,80,47,84,89,48,82,65,40,35,37,-2.091836555,"1.68428E-19","3.84341E-18","down",-2.594685746,"5.02938E-30","1.47667E-28","down",-2.205086759,"9.7498E-16","1.12648E-14","down",-1.64289821,"3.76055E-10","2.19452E-09","down",0.461600611,0.184387396,0.314819942,false,0.968147356,0.004459035,0.022390649,false,0.566785787,0.133900545,0.585575625,false,-0.101261565,0.781216037,0.880213555,false,0.412312757,0.247694403,0.536160562,false,"chr_001",2125345,2127985,"-","MS01G02590","--","--","--","uncharacterized protein LOC103440453 [Malus domestica]","--","A0A498HVF4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73151.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G02600",236.7615,285.889,142.1061,23.4166,65.0059,23.4524,31.3634,78.7534,48.5636,86.5535,34.2475,22.1941,37.466,30.5385,54.1591,11057,13308,6501,800,2653,920,1112,2611,2049,3281,1369,1049,1373,1116,1983,-2.008545375,0.00384076,0.009413477,"down",-2.159283574,"6.34589E-14","5.74613E-13","down",-2.338829323,"1.00604E-07","4.57564E-07","down",-1.78570393,"5.84179E-07","2.27717E-06","down",0.239732046,0.732482083,0.827607734,false,0.390032018,0.246026255,0.436808306,false,0.546962421,0.247775093,0.70280496,false,-0.306647739,0.696559932,0.825749245,false,-0.149025079,0.724496815,0.88750379,false,"chr_001",2133136,2135132,"+","MS01G02600","--","K01723 hydroperoxide dehydratase [EC:4.2.1.92] | (RefSeq) allene oxide synthase 1, chloroplastic-like (A)","ko00592: alpha-Linolenic acid metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","allene oxide synthase 1, chloroplastic-like [Malus domestica]","AOS1_SOLLC RecName: Full=Allene oxide synthase 1, chloroplastic {ECO:0000303|PubMed:12351632}; Short=LeAOS1 {ECO:0000303|PubMed:12351632}; EC=4.2.1.92 {ECO:0000305}; AltName: Full=Cytochrome P450 74A {ECO:0000305}; Flags: Precursor;","A0A498HQY9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73150.1};","--","GO:0009507,chloroplast; GO:0009978,allene oxide synthase activity; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0006952,defense response; GO:0006633,fatty acid biosynthetic process; GO:0009695,jasmonic acid biosynthetic process; GO:0031408,oxylipin biosynthetic process; GO:0016125,sterol metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016835,carbon-oxygen lyase activity; GO:0016836,hydro-lyase activity; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0009694,jasmonic acid metabolic process; GO:0031407,oxylipin metabolic process; GO:0008202,steroid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G02620",1.1621,1.1227,0.4394,0.4413,0.2709,0.4355,0.2268,0.576,0.2382,0.0265,0.0251,0.0213,0.0823,0.33,0.0549,54,52,20,15,11,17,8,19,10,1,1,1,3,12,2,-5.057094787,"4.20987E-07","2.32361E-06","down",-2.264907204,0.001370389,0.003137037,"down",-1.051527716,0.049891718,0.079750709,false,-1.119908394,0.059589047,0.093792612,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",2172465,2174451,"+","MS01G02620","--","--","--","protein JINGUBANG-like [Malus sylvestris]","JGB_ARATH RecName: Full=Protein JINGUBANG {ECO:0000303|PubMed:27468890};","A0A540MH66_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97739.1};","FOG: WD40 repeat","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0009846,pollen germination; GO:0000003,reproduction; GO:0008150,biological_process; GO:0009856,pollination; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0044706,multi-multicellular organism process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00400.35:WD domain, G-beta repeat","--","--","--"]
["MS01G02670",3.6375,4.8496,7.3937,15.956,10.7299,12.6257,15.1831,8.9497,9.9852,15.3562,15.8656,19.664,16.9558,18.8215,18.043,225,299,448,722,580,656,713,393,558,771,840,1231,823,911,875,1.872783279,"2.63622E-13","3.28301E-12","up",2.059829397,"2.6388E-18","3.52201E-17","up",1.527602315,"7.78916E-08","3.59368E-07","up",1.398384356,"4.0498E-06","1.39657E-05","up",-0.464022536,0.057370363,0.127906956,false,-0.648922166,0.004246201,0.021528972,false,-0.133475849,0.613645776,0.896334336,false,-0.328636263,0.104838691,0.238446912,false,-0.508319753,0.005700043,0.047888779,false,"chr_001",2314164,2316936,"-","MS01G02670","--","K23136 fraxetin 5-hydroxylase [EC:1.14.14.164] | (RefSeq) xanthotoxin 5-hydroxylase CYP82C4-like (A)","ko00999: Biosynthesis of various plant secondary metabolites; ko01110: Biosynthesis of secondary metabolites","cytochrome P450 CYP82D47-like [Malus domestica]","C82A3_SOYBN RecName: Full=Cytochrome P450 82A3; EC=1.14.-.-; AltName: Full=Cytochrome P450 CP6;","A0A540MG75_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97746.1};","Cytochrome P450 CYP2 subfamily","GO:0016020,membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0098542,defense response to other organism; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G02680",0.4734,0.4943,0.6854,0.4094,0.3758,0.5003,0.1209,0.2381,0.4491,0.4939,0.6941,0.9545,0.3324,0.5308,0.3512,98,102,139,62,68,87,19,35,84,83,123,200,54,86,57,0.56231569,0.055044029,0.095846215,false,-0.150482375,0.598413701,0.670296301,false,-0.148518841,0.572623905,0.644456119,false,-0.75422083,0.076848421,0.117465988,false,-1.298866591,0.004366339,0.015369297,"down",-0.585275154,0.199655981,0.380567568,false,-0.602474111,0.179105137,0.637700216,false,-0.693284804,0.022121191,0.074446266,false,0.026894235,0.927498687,0.976725793,false,"chr_001",2323672,2337087,"+","MS01G02680","--","K22262 WD repeat and FYVE domain-containing protein 3 | (RefSeq) protein SPIRRIG-like (A)","--","hypothetical protein DVH24_012817 [Malus domestica]","BCHC2_ARATH RecName: Full=BEACH domain-containing protein C2 {ECO:0000303|PubMed:25618824}; AltName: Full=BEACH-domain homolog C2 {ECO:0000305};","A0A498HW50_MALDO RecName: Full=BEACH domain-containing protein {ECO:0000259|PROSITE:PS50197};","Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat proteins","--","PF02138.21:Beige/BEACH domain","--","--","--"]
["MS01G02710",2.7929,2.6136,2.4438,31.4726,28.9779,39.731,51.9965,12.5294,27.5362,11.103,18.316,19.5719,22.3418,46.6385,21.7926,119,111,102,981,1079,1422,1682,379,1060,384,668,844,747,1555,728,2.819128435,"1.75647E-32","1.00398E-30","up",3.81884499,"2.00872E-37","8.98962E-36","up",3.881254237,"8.1413E-101","5.05201E-98","up",3.836262071,"4.09697E-20","5.60905E-19","up",1.028226186,0.019114633,0.05251163,false,0.028924515,0.964902839,0.981945117,false,-0.050649854,0.904676961,0.977367968,false,1.078361434,"3.44844E-06","4.91173E-05","up",0.086507002,0.777168551,0.913071326,false,"chr_001",2357743,2359685,"-","MS01G02710","--","K23136 fraxetin 5-hydroxylase [EC:1.14.14.164] | (RefSeq) xanthotoxin 5-hydroxylase CYP82C4-like (A)","ko00999: Biosynthesis of various plant secondary metabolites; ko01110: Biosynthesis of secondary metabolites","hypothetical protein DVH24_012815 [Malus domestica]","C82A3_SOYBN RecName: Full=Cytochrome P450 82A3; EC=1.14.-.-; AltName: Full=Cytochrome P450 CP6;","A0A498HVD5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73131.1};","Cytochrome P450 CYP2 subfamily","GO:0016020,membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0098542,defense response to other organism; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G02720",9.5105,13.8697,11.7526,5.1807,3.9549,6.6401,3.6733,3.3575,4.617,8.3397,10.1364,12.0348,6.3181,9.6256,8.8166,399,580,483,159,145,234,117,100,175,284,364,511,208,316,290,-0.018499627,0.929086103,0.949160735,false,-0.215036718,0.32222679,0.401875298,false,-0.949676492,"8.86017E-05",0.000253296,false,-1.310741178,"2.10579E-09","1.12311E-08","down",-1.278021249,"2.31401E-09","3.54349E-08","down",-1.079522545,"2.97011E-06","4.68863E-05","down",-0.361185335,0.144024939,0.598949137,false,-0.913933078,"9.89834E-05",0.000904941,false,-0.710482234,0.004288167,0.03917581,false,"chr_001",2363855,2367764,"-","MS01G02720","--","K14491 two-component response regulator ARR-B family | (RefSeq) LOW QUALITY PROTEIN: two-component response regulator ARR1-like (A)","ko04075: Plant hormone signal transduction","probable transcription factor KAN4 [Malus domestica]","KAN4_ARATH RecName: Full=Probable transcription factor KAN4; AltName: Full=Protein ABERRANT TESTA SHAPE; AltName: Full=Protein KANADI 4;","A0A498HQW9_MALDO RecName: Full=HTH myb-type domain-containing protein {ECO:0000259|Pfam:PF00249};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0010158,abaxial cell fate specification; GO:0080060,integument development; GO:0048481,plant ovule development; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0001708,cell fate specification; GO:0008150,biological_process; GO:0009987,cellular process; GO:0030154,cell differentiation; GO:0032502,developmental process; GO:0045165,cell fate commitment; GO:0048869,cellular developmental process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009888,tissue development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0035670,plant-type ovary development; GO:0048367,shoot system development; GO:0048437,floral organ development; GO:0048438,floral whorl development; GO:0048440,carpel development; GO:0048467,gynoecium development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0099402,plant organ development; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","GARP-G2-like","TF","GARP->GARP-G2-like"]
["MS01G02760",2.8589,3.4174,2.9806,1.0809,1.0858,2.2304,0.9935,0.8225,0.9157,1.4688,2.2456,2.1877,1.5503,1.4458,1.3189,235,280,240,65,78,154,62,48,68,98,158,182,100,93,85,-0.466404735,0.027758779,0.053259296,false,-0.808042882,"4.97295E-05",0.00014873,false,-0.873026237,0.004421644,0.009104321,false,-1.478450616,"2.88268E-11","1.88898E-10","down",-0.998386329,0.000143857,0.000795023,false,-0.654606662,0.009277917,0.040079269,false,-0.605270836,0.081110027,0.489964974,false,-0.389048799,0.250172601,0.433133058,false,-0.04049033,0.901284441,0.964994077,false,"chr_001",2388762,2392417,"-","MS01G02760","--","--","--","hypothetical protein DVH24_012809 [Malus domestica]","MOCOS_SOLLC RecName: Full=Molybdenum cofactor sulfurase {ECO:0000255|HAMAP-Rule:MF_03050}; Short=MCS {ECO:0000255|HAMAP-Rule:MF_03050}; Short=MOS {ECO:0000255|HAMAP-Rule:MF_03050}; Short=MoCo sulfurase {ECO:0000255|HAMAP-Rule:MF_03050}; EC=2.8.1.9 {ECO:0000255|HAMAP-Rule:MF_03050}; AltName: Full=Molybdenum cofactor sulfurtransferase {ECO:0000255|HAMAP-Rule:MF_03050};","A0A498HU68_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73125.1};","Molybdenum cofactor sulfurase","GO:0016829,lyase activity; GO:0008265,Mo-molybdopterin cofactor sulfurase activity; GO:0102867,molybdenum cofactor sulfurtransferase activity; GO:0030151,molybdenum ion binding; GO:0030170,pyridoxal phosphate binding; GO:0006777,Mo-molybdopterin cofactor biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016782,transferase activity, transferring sulphur-containing groups; GO:0016783,sulfurtransferase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0019842,vitamin binding; GO:0036094,small molecule binding; GO:0043168,anion binding; GO:0070279,vitamin B6 binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0018130,heterocycle biosynthetic process; GO:0019538,protein metabolic process; GO:0019637,organophosphate metabolic process; GO:0019720,Mo-molybdopterin cofactor metabolic process; GO:0043170,macromolecule metabolic process; GO:0043545,molybdopterin cofactor metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051189,prosthetic group metabolic process; GO:0071704,organic substance metabolic process; GO:0090407,organophosphate biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process","--","--","--","--"]
["MS01G02770",1.9373,2.2517,0.9647,2.5513,2.0816,2.1094,1.4626,1.9301,2.2489,0.9023,2.2909,2.1009,0.9333,0.8152,1.356,82,95,40,79,77,75,47,58,86,31,83,90,31,27,45,0.20696999,0.638234773,0.721186746,false,-0.447438144,0.27462337,0.351225395,false,0.595100742,0.108976882,0.158217265,false,0.402432233,0.290359317,0.368429142,false,0.207752947,0.59151602,0.720492435,false,0.868513854,0.011018368,0.045786592,false,-0.188597149,0.507470049,0.857737914,false,0.402192332,0.281609633,0.468666979,false,1.066114746,0.000877281,0.012213199,"up","chr_001",2397821,2401327,"+","MS01G02770","--","K04122 ent-kaurene oxidase [EC:1.14.14.86] | (RefSeq) ent-kaurene oxidase, chloroplastic-like (A)","ko00904: Diterpenoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","ent-kaurene oxidase, chloroplastic-like [Malus domestica]","KO1_ARATH RecName: Full=Ent-kaurene oxidase, chloroplastic; Short=AtKO1; EC=1.14.14.86 {ECO:0000269|PubMed:20698828, ECO:0000269|PubMed:9952446}; AltName: Full=Cytochrome P450 701A3;","A0A498HS70_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73124.1};","Cytochrome P450 CYP2 subfamily","GO:0009707,chloroplast outer membrane; GO:0005783,endoplasmic reticulum; GO:0016021,integral component of membrane; GO:0052617,ent-kaur-16-en-19-al oxidase activity; GO:0052616,ent-kaur-16-en-19-ol oxidase activity; GO:0052615,ent-kaurene oxidase activity; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0010241,ent-kaurene oxidation to kaurenoic acid; GO:0009740,gibberellic acid mediated signaling pathway; GO:0009686,gibberellin biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004497,monooxygenase activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0033331,ent-kaurene metabolic process; GO:0042214,terpene metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044255,cellular lipid metabolic process; GO:0071704,organic substance metabolic process; GO:0120252,hydrocarbon metabolic process; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009739,response to gibberellin; GO:0009755,hormone-mediated signaling pathway; GO:0010033,response to organic substance; GO:0010476,gibberellin mediated signaling pathway; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006082,organic acid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009685,gibberellin metabolic process; GO:0016053,organic acid biosynthetic process; GO:0016101,diterpenoid metabolic process; GO:0016102,diterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009527,plastid outer membrane; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0019867,outer membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031968,organelle outer membrane; GO:0031969,chloroplast membrane; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0012505,endomembrane system; GO:0031224,intrinsic component of membrane","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G02790",0.5723,1.039,0.7512,0,0,0,0,0,0,0.3358,0.2547,0.0808,0.0347,0,0.0695,21,38,27,0,0,0,0,0,0,10,8,3,1,0,2,-1.649505675,0.007987856,0.018014892,"down",-4.209008124,"2.37323E-05","7.48432E-05","down",-6.781936952,"2.88947E-07","1.23092E-06","down",-6.666358848,"4.35453E-07","1.73053E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",2410101,2413953,"-","MS01G02790","--","K26385 lysine histidine transporter | (RefSeq) lysine histidine transporter-like 8 (A)","--","lysine histidine transporter-like 8 [Malus sylvestris]","LHTL8_ARATH RecName: Full=Lysine histidine transporter-like 8; AltName: Full=Amino acid transporter-like protein 1;","A0A498HT17_MALDO RecName: Full=Aa_trans domain-containing protein {ECO:0000259|Pfam:PF01490};","Amino acid transporters","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0005886,plasma membrane; GO:0015171,amino acid transmembrane transporter activity; GO:0003333,amino acid transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005342,organic acid transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0046943,carboxylic acid transmembrane transporter activity; GO:0006810,transport; GO:0006865,amino acid transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015849,organic acid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:1903825,organic acid transmembrane transport; GO:1905039,carboxylic acid transmembrane transport; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF01490.21:Transmembrane amino acid transporter protein","--","--","--"]
["MS01G02810",116.7668,96.7823,89.8069,105.6297,152.9654,107.114,100.3295,147.7369,103.8844,191.1521,129.4513,148.0611,159.8373,150.6823,195.4532,2859,2362,2154,1892,3273,2203,1865,2568,2298,3799,2713,3669,3071,2887,3752,0.821326857,0.000136524,0.000475364,false,1.026965854,"1.62659E-09","9.22514E-09","up",0.490674459,0.03321797,0.05563599,false,0.500061072,0.022552117,0.039608329,false,-0.30718749,0.215590001,0.353170275,false,-0.512416718,0.014844919,0.057612058,false,0.005244578,0.984206572,0.995140998,false,-0.310231164,0.230749463,0.409864339,false,-0.509254941,0.02489158,0.134833851,false,"chr_001",2435438,2437299,"+","MS01G02810","--","K03100 signal peptidase I [EC:3.4.21.89] | (RefSeq) thylakoidal processing peptidase 1, chloroplastic-like (A)","ko03060: Protein export","hypothetical protein DVH24_012804 [Malus domestica]","TPP2_ARATH RecName: Full=Probable thylakoidal processing peptidase 2, chloroplastic; EC=3.4.21.89; AltName: Full=Signal peptidase I-2; Flags: Precursor;","A0A498HQV8_MALDO RecName: Full=Peptidase_S26 domain-containing protein {ECO:0000259|Pfam:PF10502};","Mitochondrial inner membrane protease, subunit IMP1","GO:0009535,chloroplast thylakoid membrane; GO:0005887,integral component of plasma membrane; GO:0004252,serine-type endopeptidase activity; GO:0006465,signal peptide processing; GO:0010027,thylakoid membrane organization; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0016787,hydrolase activity; GO:0017171,serine hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006508,proteolysis; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016485,protein processing; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0051604,protein maturation; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006996,organelle organization; GO:0009657,plastid organization; GO:0009668,plastid membrane organization; GO:0016043,cellular component organization; GO:0061024,membrane organization; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity; GO:0005886,plasma membrane; GO:0016021,integral component of membrane; GO:0031224,intrinsic component of membrane; GO:0031226,intrinsic component of plasma membrane; GO:0071944,cell periphery","PF10502.12:Signal peptidase, peptidase S26","--","--","--"]
["MS01G02840",54.0739,42.9005,54.97,21.6495,17.6052,26.935,19.0728,19.4406,16.2779,31.776,33.8339,37.7802,17.5879,21.1068,24.5292,239,189,238,70,68,100,64,61,65,114,128,169,61,73,85,-0.366761451,0.061583661,0.105615389,false,-0.973674227,"1.51015E-05","4.9114E-05",false,-0.990261632,"3.05941E-05","9.46977E-05",false,-1.189616757,"4.10987E-07","1.63833E-06","down",-0.810133872,0.000626108,0.002888151,false,-0.200297145,0.461677189,0.64941762,false,-0.199307277,0.471522161,0.843126384,false,-0.605991615,0.0117856,0.045811013,false,0.007592282,0.977767423,0.993237527,false,"chr_001",2447312,2485710,"+","MS01G02840","--","--","--","hypothetical protein C1H46_016626 [Malus baccata]","NAT3_ARATH RecName: Full=Nucleobase-ascorbate transporter 3; Short=AtNAT3;","A0A540MG78_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97760.1};","Xanthine/uracil transporters","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0015207,adenine transmembrane transporter activity; GO:0015208,guanine transmembrane transporter activity; GO:0015294,solute:cation symporter activity; GO:0015210,uracil transmembrane transporter activity; GO:0098702,adenine import across plasma membrane; GO:0098710,guanine import across plasma membrane; GO:0035344,hypoxanthine transport; GO:0098721,uracil import across plasma membrane; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005345,purine nucleobase transmembrane transporter activity; GO:0015205,nucleobase transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015291,secondary active transmembrane transporter activity; GO:0015293,symporter activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022853,active ion transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0005350,pyrimidine nucleobase transmembrane transporter activity; GO:0006810,transport; GO:0006863,purine nucleobase transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015851,nucleobase transport; GO:0015853,adenine transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0072530,purine-containing compound transmembrane transport; GO:0098657,import into cell; GO:0098739,import across plasma membrane; GO:1904823,purine nucleobase transmembrane transport; GO:0015854,guanine transport; GO:1903716,guanine transmembrane transport; GO:0015855,pyrimidine nucleobase transport; GO:0015857,uracil transport; GO:0072531,pyrimidine-containing compound transmembrane transport; GO:1903791,uracil transmembrane transport; GO:1904082,pyrimidine nucleobase transmembrane transport; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","--","--","--","--"]
["MS01G02860",4.4744,3.9245,1.4496,1.0255,4.6909,0.8931,1.3058,8.6803,6.5243,4.8852,0.8138,1.006,1.0926,1.1641,2.153,167,146,53,28,153,28,37,230,220,148,26,38,32,34,63,-0.34022449,0.614409855,0.701047361,false,-0.881100658,0.054014447,0.085348779,false,-0.333789095,0.619235336,0.686714066,false,1.013647737,0.229700077,0.301903127,false,1.372845775,0.194573337,0.327238024,false,1.913904175,0.000702756,0.0049598,"up",1.342473439,0.191426102,0.648788741,false,0.032916423,0.967740034,0.983790947,false,0.579608961,0.373092916,0.658813115,false,"chr_001",2490074,2492549,"+","MS01G02860","--","K20717 mitogen-activated protein kinase kinase kinase YODA [EC:2.7.11.25] | (RefSeq) mitogen-activated protein kinase kinase kinase YODA-like (A)","ko04016: MAPK signaling pathway - plant","mitogen-activated protein kinase kinase kinase 5-like [Malus domestica]","M3K5G_ARATH RecName: Full=Mitogen-activated protein kinase kinase kinase 5 {ECO:0000303|PubMed:27679653}; EC=2.7.11.25 {ECO:0000269|PubMed:27679653}; AltName: Full=MAP3K gamma protein kinase {ECO:0000303|PubMed:10095117}; Short=AtMAP3Kgamma {ECO:0000303|PubMed:10095117};","A0A498HW34_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73113.1};","MEKK and related serine/threonine protein kinases","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0004709,MAP kinase kinase kinase activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0050832,defense response to fungus; GO:0000165,MAPK cascade; GO:0002221,pattern recognition receptor signaling pathway; GO:0046777,protein autophosphorylation; GO:0006468,protein phosphorylation; GO:2000071,regulation of defense response by callose deposition; GO:1900424,regulation of defense response to bacterium; GO:1900150,regulation of defense response to fungus; GO:0045088,regulation of innate immune response; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009987,cellular process; GO:0023052,signaling; GO:0035556,intracellular signal transduction; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0002376,immune system process; GO:0002682,regulation of immune system process; GO:0002764,immune response-regulating signaling pathway; GO:0006955,immune response; GO:0048583,regulation of response to stimulus; GO:0050776,regulation of immune response; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0009743,response to carbohydrate; GO:0010033,response to organic substance; GO:0031347,regulation of defense response; GO:0032879,regulation of localization; GO:0033036,macromolecule localization; GO:0033037,polysaccharide localization; GO:0042221,response to chemical; GO:0051179,localization; GO:0052542,defense response by callose deposition; GO:0052545,callose localization; GO:0080134,regulation of response to stress; GO:1901700,response to oxygen-containing compound; GO:0002831,regulation of response to biotic stimulus; GO:0009617,response to bacterium; GO:0032101,regulation of response to external stimulus; GO:0042742,defense response to bacterium; GO:0045087,innate immune response; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G02880",3.9099,3.264,3.9319,1.4359,1.4024,1.32,1.6719,2.0962,2.0347,1.7435,2.2669,1.874,1.8964,1.417,1.7678,268,223,264,72,84,76,87,102,126,97,133,130,102,76,95,-0.732790351,0.00013877,0.000482503,false,-0.833688716,"8.0932E-05",0.000233606,false,-1.201280672,"1.25038E-08","6.49411E-08","down",-0.654063124,0.001367826,0.00310419,false,0.091333994,0.687307751,0.795757111,false,0.195711692,0.42367852,0.615650897,false,0.545468077,0.024716414,0.305093926,false,-0.451511361,0.058574815,0.155412962,false,-0.341442005,0.178736762,0.449941741,false,"chr_001",2501205,2506286,"+","MS01G02880","--","K16572 gamma-tubulin complex component 5 | (RefSeq) gamma-tubulin complex component 5-like isoform X1 (A)","--","hypothetical protein DVH24_012797 [Malus domestica]","GACP2_ARATH RecName: Full=Gamma-tubulin complex component 2; Short=AtGCP2; Short=GCP-2; AltName: Full=Protein SPIRAL 3; AltName: Full=Spindle pole body protein Spc97 homolog; Short=AtSpc97;","A0A498HW34_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73113.1};","Uncharacterized conserved protein","GO:0005938,cell cortex; GO:0055028,cortical microtubule; GO:0005737,cytoplasm; GO:0000923,equatorial microtubule organizing center; GO:0000930,gamma-tubulin complex; GO:0008275,gamma-tubulin small complex; GO:0005635,nuclear envelope; GO:0000922,spindle pole; GO:0043015,gamma-tubulin binding; GO:0031122,cytoplasmic microtubule organization; GO:0048229,gametophyte development; GO:0033566,gamma-tubulin complex localization; GO:0051321,meiotic cell cycle; GO:0007020,microtubule nucleation; GO:0000278,mitotic cell cycle; GO:0090063,positive regulation of microtubule nucleation; GO:0051225,spindle assembly; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0015631,tubulin binding; GO:0000226,microtubule cytoskeleton organization; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0007017,microtubule-based process; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0097435,supramolecular fiber organization; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0031503,protein-containing complex localization; GO:0051179,localization; GO:0000003,reproduction; GO:0007049,cell cycle; GO:0022414,reproductive process; GO:0022607,cellular component assembly; GO:0031109,microtubule polymerization or depolymerization; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0046785,microtubule polymerization; GO:0051258,protein polymerization; GO:0065003,protein-containing complex assembly; GO:0010638,positive regulation of organelle organization; GO:0010968,regulation of microtubule nucleation; GO:0031110,regulation of microtubule polymerization or depolymerization; GO:0031112,positive regulation of microtubule polymerization or depolymerization; GO:0031113,regulation of microtubule polymerization; GO:0031116,positive regulation of microtubule polymerization; GO:0031334,positive regulation of protein-containing complex assembly; GO:0032271,regulation of protein polymerization; GO:0032273,positive regulation of protein polymerization; GO:0032886,regulation of microtubule-based process; GO:0033043,regulation of organelle organization; GO:0043254,regulation of protein-containing complex assembly; GO:0044087,regulation of cellular component biogenesis; GO:0044089,positive regulation of cellular component biogenesis; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051128,regulation of cellular component organization; GO:0051130,positive regulation of cellular component organization; GO:0051493,regulation of cytoskeleton organization; GO:0051495,positive regulation of cytoskeleton organization; GO:0065007,biological regulation; GO:0070507,regulation of microtubule cytoskeleton organization; GO:1902903,regulation of supramolecular fiber organization; GO:1902905,positive regulation of supramolecular fiber organization; GO:0007051,spindle organization; GO:0022402,cell cycle process; GO:0070925,organelle assembly; GO:0140694,non-membrane-bounded organelle assembly; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity; GO:0005856,cytoskeleton; GO:0005874,microtubule; GO:0005881,cytoplasmic microtubule; GO:0015630,microtubule cytoskeleton; GO:0030863,cortical cytoskeleton; GO:0030981,cortical microtubule cytoskeleton; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0099080,supramolecular complex; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber; GO:0005815,microtubule organizing center; GO:0032153,cell division site; GO:0032991,protein-containing complex; GO:0005634,nucleus; GO:0012505,endomembrane system; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005819,spindle","PF04130.16:Gamma tubulin complex component C-terminal","--","--","--"]
["MS01G02930",0.7839,0.5898,0.5602,0.7501,0.7176,0.1866,0.7744,1.049,0.6074,1.7383,1.9232,1.9364,0.5494,1.1019,1.4998,20,15,14,14,16,4,15,19,14,36,42,50,11,22,30,1.717697765,"6.77958E-06","3.03735E-05","up",0.98791171,0.055401499,0.08729277,false,"NA","NA","NA","NA","NA","NA","NA","NA",-1.104325521,0.006819899,0.022439305,"down",-0.366727195,0.493830851,0.677429293,false,"NA","NA","NA","NA",-1.702398022,0.001602138,0.00920832,"down",-0.961948027,0.147684065,0.404656675,false,"chr_001",2528848,2529938,"+","MS01G02930","--","K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor 3-like (A)","--","ethylene-responsive transcription factor ERF003-like [Malus domestica]","ERF03_ARATH RecName: Full=Ethylene-responsive transcription factor ERF003;","A0A498HUD1_MALDO SubName: Full=AP2 domain class transcription factor {ECO:0000313|EMBL:AUZ96375.1};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0009873,ethylene-activated signaling pathway; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009723,response to ethylene; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00847.23:AP2 domain","AP2/ERF-ERF","TF","AP2/ERF->AP2/ERF-ERF"]
["MS01G02940",22.2477,22.8821,23.256,7.1107,8.425,8.4792,7.0274,13.5273,12.1059,16.0706,12.2168,7.5383,8.6347,9.3066,9.697,834,855,854,195,276,267,200,360,410,489,392,286,254,273,285,-0.73763129,0.007521117,0.017073017,false,-1.015072738,"4.84383E-15","4.86971E-14","down",-1.292789145,"1.37426E-17","1.86486E-16","down",-0.784944752,0.001301389,0.002963135,false,-0.033977549,0.922532773,0.953806866,false,0.24674296,0.338639371,0.535281163,false,0.508528954,0.069669379,0.461097325,false,-0.539585046,0.08082211,0.197835408,false,-0.251932076,0.150181966,0.408552726,false,"chr_001",2547406,2549008,"+","MS01G02940","--","--","--","uncharacterized protein LOC103441769 [Malus domestica]","--","A0A498HNS3_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73106.1};","--","--","PF05910.15:Plant protein of unknown function (DUF868)","--","--","--"]
["MS01G02960",4.3634,2.7433,4.3356,1.9087,1.6644,2.4934,1.7625,1.8849,2.1895,2.0069,1.4274,2.012,1.557,1.1152,1.1873,75,47,73,24,25,36,23,23,34,28,21,35,21,15,16,-0.877689811,0.015159714,0.031559332,false,-1.272150013,0.001019914,0.002398885,"down",-0.704917979,0.050652596,0.080841141,false,-0.685971943,0.052498822,0.083861682,false,0.205497292,0.601789034,0.728723273,false,0.601555518,0.157546436,0.323642084,false,0.018154967,0.962194577,0.98978753,false,0.190449278,0.636880368,0.7840376,false,0.591804148,0.166278871,0.432351758,false,"chr_001",2562969,2564459,"+","MS01G02960","--","K15414 complement component 1 Q subcomponent-binding protein, mitochondrial | (RefSeq) uncharacterized protein At2g39795, mitochondrial (A)","--","hypothetical protein DVH24_012788 [Malus domestica]","--","A0A498HS50_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73104.1};","MAM33, mitochondrial matrix glycoprotein","GO:0005759,mitochondrial matrix; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0031974,membrane-enclosed lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity","PF02330.19:Mitochondrial glycoprotein","--","--","--"]
["MS01G02970",3.7264,2.9242,3.6158,11.5495,8.2328,10.9808,9.5251,9.5626,12.5372,4.9545,8.2329,6.3067,7.4758,6.3181,7.8118,101,79,96,229,195,250,196,184,307,109,191,173,159,134,166,1.104923085,"8.59997E-06","3.77563E-05","up",1.366772101,"3.45234E-10","2.11735E-09","up",1.792989498,"2.85936E-15","3.15557E-14","up",1.904154032,"5.21463E-19","6.65246E-18","up",0.810740751,0.000590498,0.002742141,false,0.554101067,0.006583033,0.030499291,false,0.111441399,0.596593594,0.890379276,false,0.703148785,0.004314821,0.020458463,false,0.450449774,0.032826616,0.161959443,false,"chr_001",2566644,2567802,"-","MS01G02970","--","--","--","zinc finger protein 3-like [Malus domestica]","ZFP1_ARATH RecName: Full=Zinc finger protein 1 {ECO:0000305}; Short=AtZFP1 {ECO:0000303|PubMed:8980531};","D9ZIS4_MALDO SubName: Full=C2H2L domain class transcription factor {ECO:0000313|EMBL:ADL36627.1};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0009738,abscisic acid-activated signaling pathway; GO:0009788,negative regulation of abscisic acid-activated signaling pathway; GO:0009640,photomorphogenesis; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0009787,regulation of abscisic acid-activated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023057,negative regulation of signaling; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:1901419,regulation of response to alcohol; GO:1901420,negative regulation of response to alcohol; GO:1905957,regulation of cellular response to alcohol; GO:1905958,negative regulation of cellular response to alcohol; GO:0007275,multicellular organism development; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009639,response to red or far red light; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13912.9:C2H2-type zinc finger","C2H2","TF","C2H2"]
["MS01G03020",24.9791,23.346,26.2275,44.4243,35.5789,42.6531,37.2752,30.7703,35.7875,43.9592,53.8823,44.345,48.8563,43.3154,38.3746,2558,2383,2631,3328,3184,3669,2898,2237,3311,3654,4723,4596,3926,3471,3081,1.116049342,"4.01844E-20","9.71759E-19","up",1.103642186,"1.9366E-14","1.83868E-13","up",0.931169954,"3.28157E-12","2.63179E-11",false,0.761608692,"7.25062E-09","3.62531E-08",false,-0.342788192,0.017814189,0.049596316,false,-0.326970209,0.042373812,0.12744381,false,-0.171373701,0.243078553,0.698819594,false,-0.169122646,0.254286524,0.437779497,false,-0.14725375,0.364241019,0.651324768,false,"chr_001",2608526,2622529,"-","MS01G03020","--","K11643 chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-] | (RefSeq) CHD3-type chromatin-remodeling factor PICKLE (A)","ko03082: ATP-dependent chromatin remodeling","CHD3-type chromatin-remodeling factor PICKLE [Malus domestica]","PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; EC=3.6.4.-; AltName: Full=Protein CHROMATIN REMODELING 6 {ECO:0000303|PubMed:16547115}; Short=AtCHR6; AltName: Full=Protein GYMNOS;","A0A498HNI5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73098.1};","Predicted helicase","GO:0000785,chromatin; GO:0005634,nucleus; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0140658,ATP-dependent chromatin remodeler activity; GO:0003682,chromatin binding; GO:0003677,DNA binding; GO:0004386,helicase activity; GO:0042393,histone binding; GO:0046872,metal ion binding; GO:0051301,cell division; GO:0009992,cellular water homeostasis; GO:0006338,chromatin remodeling; GO:0009736,cytokinin-activated signaling pathway; GO:0009788,negative regulation of abscisic acid-activated signaling pathway; GO:0045892,negative regulation of DNA-templated transcription; GO:2000023,regulation of lateral root development; GO:0009733,response to auxin; GO:0009739,response to gibberellin; GO:0009414,response to water deprivation; GO:0048364,root development; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0008094,ATP-dependent activity, acting on DNA; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0003676,nucleic acid binding; GO:0005515,protein binding; GO:0043169,cation binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0006884,cell volume homeostasis; GO:0008361,regulation of cell size; GO:0016043,cellular component organization; GO:0019725,cellular homeostasis; GO:0030104,water homeostasis; GO:0032535,regulation of cellular component size; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0055082,cellular chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0071840,cellular component organization or biogenesis; GO:0090066,regulation of anatomical structure size; GO:0006325,chromatin organization; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009735,response to cytokinin; GO:0009755,hormone-mediated signaling pathway; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071368,cellular response to cytokinin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0009787,regulation of abscisic acid-activated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023057,negative regulation of signaling; GO:0033993,response to lipid; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071396,cellular response to lipid; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901419,regulation of response to alcohol; GO:1901420,negative regulation of response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:1905957,regulation of cellular response to alcohol; GO:1905958,negative regulation of cellular response to alcohol; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048527,lateral root development; GO:0048528,post-embryonic root development; GO:0048580,regulation of post-embryonic development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0090696,post-embryonic plant organ development; GO:0099402,plant organ development; GO:2000026,regulation of multicellular organismal development; GO:2000069,regulation of post-embryonic root development; GO:2000280,regulation of root development; GO:0001101,response to acid chemical; GO:0006950,response to stress; GO:0009415,response to water; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005694,chromosome; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle","PF00176.26:SNF2-related domain","PHD","TR","PHD"]
["MS01G03060",0.4598,0.6217,0.5102,0.2459,0.2288,0.2856,0.079,0.4224,0.2434,0.2709,0.1635,0.1383,0.0764,0.1533,0.153,23,31,25,9,10,12,3,15,11,11,7,7,3,6,6,-1.298408215,0.015167083,0.031570422,"down",-1.767023055,0.002989343,0.006400596,"down",-0.854105313,0.081307856,0.122358197,false,-0.821238655,0.178590881,0.243317398,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",2639387,2643136,"+","MS01G03060","--","K03695 ATP-dependent Clp protease ATP-binding subunit ClpB | (RefSeq) LOW QUALITY PROTEIN: chaperone protein ClpB4, mitochondrial-like (A)","--","hypothetical protein DVH24_012779 [Malus domestica]","CLPB3_ORYSJ RecName: Full=Chaperone protein ClpB3, mitochondrial; AltName: Full=ATP-dependent Clp protease ATP-binding subunit ClpB homolog 3; AltName: Full=Casein lytic proteinase B3; Flags: Precursor;","A0A498HU42_MALDO RecName: Full=Signal peptidase complex subunit 2 {ECO:0000256|ARBA:ARBA00017057};","Chaperone HSP104 and related ATP-dependent Clp proteases","GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0034605,cellular response to heat; GO:0042026,protein refolding; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009266,response to temperature stimulus; GO:0009408,response to heat; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0006457,protein folding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF17871.4:AAA lid domain","--","--","--"]
["MS01G03070",2.7295,2.8213,2.2234,0.3392,0.0631,0.8534,0.0363,0.1165,0.1221,0.9171,2.9633,1.1441,0.2811,1.1979,0.3517,99,102,79,9,2,26,1,3,4,27,92,42,8,34,10,-0.465775433,0.28070504,0.375616493,false,-1.80249745,0.000254826,0.000671794,"down",-2.450423726,"7.0578E-05",0.000205337,"down",-4.530791111,"7.94713E-14","6.71477E-13","down",-4.059855187,"1.06242E-07","1.21347E-06","down","NA","NA","NA","NA","NA","NA","NA","NA",-1.979508738,0.009800858,0.039632046,"down",-0.630747582,0.475252464,0.740125694,false,"chr_001",2647699,2649953,"+","MS01G03070","--","--","--","U-box domain-containing protein 4 [Malus domestica]","PUB45_ARATH RecName: Full=U-box domain-containing protein 45; EC=2.3.2.27; AltName: Full=Plant U-box protein 45; AltName: Full=RING-type E3 ubiquitin transferase PUB45 {ECO:0000305};","A0A498HS43_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73094.1};","FOG: Armadillo/beta-catenin-like repeats","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0070696,transmembrane receptor protein serine/threonine kinase binding; GO:0004842,ubiquitin-protein transferase activity; GO:0016567,protein ubiquitination; GO:0003674,molecular_function; GO:0005102,signaling receptor binding; GO:0005488,binding; GO:0005515,protein binding; GO:0033612,receptor serine/threonine kinase binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00514.26:Armadillo/beta-catenin-like repeat","--","--","--"]
["MS01G03080",36.6294,38.7667,45.8386,47.9426,61.9262,39.4356,66.0679,85.3694,57.4941,48.4844,45.8262,46.9637,63.6723,49.4638,58.7624,1129,1191,1384,1081,1668,1021,1546,1868,1601,1213,1209,1465,1540,1193,1420,0.411396156,0.002724862,0.006929042,false,0.800388695,"4.79919E-07","1.95603E-06",false,0.527960885,0.021447316,0.037700192,false,1.077649515,"1.52684E-07","6.42023E-07","up",0.677781056,0.000829157,0.0036917,false,0.291185249,0.168214397,0.338203133,false,0.544471896,0.043531572,0.381329935,false,0.135478366,0.554923067,0.725736435,false,-0.244743696,0.305493962,0.597831236,false,"chr_001",2657726,2660223,"-","MS01G03080","--","--","--","hypothetical protein L3X38_006903 [Prunus dulcis]","SDF2_ARATH RecName: Full=Stromal cell-derived factor 2-like protein; Short=AtSDF2; Short=SDF2-like protein; Flags: Precursor;","A0A5E4E7C8_PRUDU SubName: Full=PREDICTED: stromal {ECO:0000313|EMBL:VVA11595.1};","Uncharacterized secreted protein SDF2 (Stromal cell-derived factor 2), contains MIR domains","GO:0005783,endoplasmic reticulum; GO:0005773,vacuole; GO:0042742,defense response to bacterium; GO:0050832,defense response to fungus; GO:0002221,pattern recognition receptor signaling pathway; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0009620,response to fungus; GO:0002376,immune system process; GO:0002682,regulation of immune system process; GO:0002764,immune response-regulating signaling pathway; GO:0006955,immune response; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009987,cellular process; GO:0023052,signaling; GO:0048583,regulation of response to stimulus; GO:0050776,regulation of immune response; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02815.22:MIR domain","--","--","--"]
["MS01G03120",32.304,42.0231,34.1807,24.4315,13.4895,19.5117,23.5165,21.185,29.9476,13.8672,12.4173,11.009,11.8728,16.134,15.1329,1699,2203,1761,940,620,862,939,791,1423,592,559,586,490,664,624,-1.351776162,"6.26624E-14","8.32615E-13","down",-1.041386146,"2.18269E-09","1.21585E-08","down",-0.709088847,0.003338876,0.007060326,false,-0.26258039,0.147374757,0.206684535,false,1.103327051,"5.74514E-09","8.23808E-08","up",0.795473135,"2.07763E-05",0.000256213,false,0.447889759,0.06519914,0.449877144,false,0.658093688,0.007516071,0.032127497,false,0.355514001,0.138931004,0.390992951,false,"chr_001",2713265,2715513,"+","MS01G03120","--","K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11] | (RefSeq) CBL-interacting protein kinase 2-like (A)","--","CBL-interacting serine/threonine-protein kinase 5 [Malus domestica]","CIPKP_ARATH RecName: Full=CBL-interacting serine/threonine-protein kinase 25; EC=2.7.11.1; AltName: Full=SNF1-related kinase 3.25; AltName: Full=SOS2-like protein kinase PKS25;","A0A0U3BUG3_MALDO RecName: Full=Non-specific serine/threonine protein kinase {ECO:0000256|ARBA:ARBA00012513}; EC=2.7.11.1 {ECO:0000256|ARBA:ARBA00012513};","Serine/threonine protein kinase","GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0030007,cellular potassium ion homeostasis; GO:0050832,defense response to fungus; GO:0006468,protein phosphorylation; GO:0001666,response to hypoxia; GO:0007165,signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006873,cellular ion homeostasis; GO:0006875,cellular metal ion homeostasis; GO:0008150,biological_process; GO:0009987,cellular process; GO:0019725,cellular homeostasis; GO:0030003,cellular cation homeostasis; GO:0030004,cellular monovalent inorganic cation homeostasis; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055065,metal ion homeostasis; GO:0055067,monovalent inorganic cation homeostasis; GO:0055075,potassium ion homeostasis; GO:0055080,cation homeostasis; GO:0055082,cellular chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0098771,inorganic ion homeostasis; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0009628,response to abiotic stimulus; GO:0036293,response to decreased oxygen levels; GO:0070482,response to oxygen levels; GO:0007154,cell communication; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G03130",110.0449,123.292,64.6174,18.7154,12.233,14.2339,18.1572,20.21,39.2869,26.0518,16.3787,9.2656,14.6392,13.2422,15.8481,2347,2621,1350,292,228,255,294,306,757,451,299,200,245,221,265,-2.331859828,"9.41453E-10","7.70661E-09","down",-2.481995575,"1.20322E-22","2.16705E-21","down",-2.514518617,"9.90302E-18","1.36434E-16","down",-1.678704563,"3.68285E-07","1.47602E-06","down",0.67016788,0.105883386,0.205980239,false,0.824458528,0.004531076,0.022670127,false,0.840170601,0.00894999,0.192150936,false,-0.165453974,0.666874932,0.806208368,false,-0.009451755,0.965413834,0.989620586,false,"chr_001",2734216,2735664,"+","MS01G03130","--","K18834 WRKY transcription factor 1 | (RefSeq) WRKY transcription factor 1-like (A)","ko04626: Plant-pathogen interaction","probable WRKY transcription factor 40 isoform X1 [Malus domestica]","WRK40_ARATH RecName: Full=Probable WRKY transcription factor 40 {ECO:0000303|Ref.1}; AltName: Full=WRKY DNA-binding protein 40 {ECO:0000303|Ref.1};","A0A498HUB3_MALDO SubName: Full=Group IIa WRKY transcription factor {ECO:0000313|EMBL:QDL95021.1};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0042742,defense response to bacterium; GO:0050832,defense response to fungus; GO:0045892,negative regulation of DNA-templated transcription; GO:0031347,regulation of defense response; GO:0002237,response to molecule of bacterial origin; GO:0009751,response to salicylic acid; GO:0009611,response to wounding; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0009620,response to fungus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0048583,regulation of response to stimulus; GO:0080134,regulation of response to stress; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0014070,response to organic cyclic compound; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03106.18:WRKY DNA -binding domain","WRKY","TF","WRKY"]
["MS01G03140",8.7907,6.3778,2.3829,8.3505,13.4691,2.7198,24.597,27.4935,13.5782,8.4437,1.5666,5.4961,13.1012,3.1734,8.1717,177,128,47,123,237,46,376,393,247,138,27,112,207,50,129,0.023448853,0.969182719,0.978086146,false,0.768680215,0.148530904,0.206931621,false,0.716569446,0.236565386,0.308346604,false,2.187760081,"9.91427E-07","3.74349E-06","up",2.181962983,"3.1012E-05",0.000203166,"up",1.433469955,0.001655611,0.010047308,"up",1.46271994,0.005272206,0.145096161,false,0.719939104,0.27690536,0.463446286,false,-0.021763249,0.971174678,0.991655119,false,"chr_001",2749227,2750732,"+","MS01G03140","--","K18834 WRKY transcription factor 1 | (RefSeq) WRKY transcription factor 1-like (A)","ko04626: Plant-pathogen interaction","hypothetical protein DVH24_012770 [Malus domestica]","WRK76_ORYSI RecName: Full=WRKY transcription factor WRKY76 {ECO:0000303|PubMed:15047897}; Short=OsWRKY76 {ECO:0000303|PubMed:15047897};","A0A498HNP9_MALDO RecName: Full=WRKY domain-containing protein {ECO:0000259|PROSITE:PS50811};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0043565,sequence-specific DNA binding; GO:0009617,response to bacterium; GO:0010200,response to chitin; GO:0009620,response to fungus; GO:0009751,response to salicylic acid; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0010033,response to organic substance; GO:0010243,response to organonitrogen compound; GO:0042221,response to chemical; GO:1901698,response to nitrogen compound; GO:1901700,response to oxygen-containing compound; GO:0014070,response to organic cyclic compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03106.18:WRKY DNA -binding domain","WRKY","TF","WRKY"]
["MS01G03150",1.9827,1.5635,1.9975,0.6746,0.7232,0.938,0.6956,0.7073,0.6325,0.64,0.8598,0.6844,0.6289,0.6196,0.9607,229,180,226,57,73,91,61,58,66,60,85,80,57,56,87,-1.160668802,"1.84356E-07","1.0773E-06","down",-1.036006352,"3.73176E-05",0.000113844,"down",-1.033177019,"1.06816E-05","3.57325E-05","down",-1.163442158,"5.63746E-07","2.20329E-06","down",0.009698894,0.970987242,0.983345702,false,-0.110885821,0.707490458,0.833832345,false,-0.131079048,0.628658525,0.902073624,false,0.142992062,0.599013383,0.75820185,false,0.026747131,0.928634264,0.977234384,false,"chr_001",2751970,2760777,"-","MS01G03150","--","--","--","formin-like protein 18 isoform X1 [Malus domestica]","FH18_ARATH RecName: Full=Formin-like protein 18; Short=AtFH18;","A0A540KK72_MALBA RecName: Full=Formin-like protein {ECO:0000256|RuleBase:RU361260};","--","GO:0004721,phosphoprotein phosphatase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0140096,catalytic activity, acting on a protein","PF02181.26:Formin Homology 2 Domain","--","--","--"]
["MS01G03160",3.4742,4.6907,4.3421,1.0208,0.7059,0.889,0.7698,1.6465,0.7906,1.44,1.1759,0.9304,0.4138,0.5809,0.9525,107,144,131,23,19,23,18,36,22,36,31,29,10,14,23,-1.636998097,"4.35188E-08","2.80975E-07","down",-2.392787882,"1.9444E-11","1.3558E-10","down",-2.051257683,"9.26639E-11","6.34649E-10","down",-1.687063518,"5.19417E-06","1.76561E-05","down",-0.038793044,0.934825467,0.961115212,false,0.729431008,0.178571238,0.352397016,false,0.366536918,0.452892642,0.831894686,false,-0.400423003,0.342206513,0.533291335,false,0.369772161,0.457965085,0.727901613,false,"chr_001",2775451,2780853,"+","MS01G03160","--","--","--","protein POLAR-like 1 [Malus domestica]","POLAR_ARATH RecName: Full=Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION {ECO:0000303|PubMed:21963668};","A0A498HS32_MALDO RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000256|RuleBase:RU363031}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU363031};","--","GO:0005938,cell cortex; GO:0071944,cell periphery; GO:0005737,cytoplasm; GO:0008356,asymmetric cell division; GO:0008150,biological_process; GO:0009987,cellular process; GO:0051301,cell division; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G03170",33.8528,29.6837,13.7241,0.6642,0.3707,0.1928,0.7823,0.4563,1.255,0.7317,0.5046,0.4268,0.8945,0.621,0.3443,627,548,249,9,6,3,11,6,21,11,8,8,13,9,5,-5.370295269,"3.77111E-32","2.09868E-30","down",-5.08928985,"4.45141E-29","1.23573E-27","down",-5.789408003,"1.98661E-28","6.23532E-27","down",-4.666890582,"1.62965E-25","3.15228E-24","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",2782702,2784736,"+","MS01G03170","--","K01850 chorismate mutase [EC:5.4.99.5] | (RefSeq) chorismate mutase 2 (A)","ko00400: Phenylalanine, tyrosine and tryptophan biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01230: Biosynthesis of amino acids","chorismate mutase 2 [Malus domestica]","CM2_ARATH RecName: Full=Chorismate mutase 2 {ECO:0000303|Ref.2}; Short=AtCM2 {ECO:0000303|Ref.2}; EC=5.4.99.5 {ECO:0000269|PubMed:10564818, ECO:0000269|PubMed:25160622, ECO:0000269|PubMed:8953244}; AltName: Full=CM-2 {ECO:0000303|Ref.2};","A0A540KK64_MALBA RecName: Full=Chorismate mutase {ECO:0000256|ARBA:ARBA00012404, ECO:0000256|PIRNR:PIRNR017318}; EC=5.4.99.5 {ECO:0000256|ARBA:ARBA00012404, ECO:0000256|PIRNR:PIRNR017318};","Chorismate mutase","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0004106,chorismate mutase activity; GO:0042803,protein homodimerization activity; GO:0009073,aromatic amino acid family biosynthetic process; GO:0008652,cellular amino acid biosynthetic process; GO:0046417,chorismate metabolic process; GO:1901747,prephenate(2-) biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016853,isomerase activity; GO:0016866,intramolecular transferase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009072,aromatic amino acid family metabolic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0043648,dicarboxylic acid metabolic process; GO:0043650,dicarboxylic acid biosynthetic process; GO:1901745,prephenate(2-) metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G03180",4.9604,4.6202,4.5562,1.3594,1.1921,2.0859,1.5594,1.1506,2.3849,1.6919,2.6417,1.3101,0.7996,0.817,1.2382,419,389,377,84,88,148,100,69,182,116,191,112,53,54,82,-1.148019734,"9.31781E-06","4.05794E-05","down",-2.018291268,"5.16632E-20","7.80949E-19","down",-1.403192467,"1.91607E-09","1.10992E-08","down",-1.194464518,"3.50543E-06","1.21987E-05","down",-0.03880969,0.91314233,0.947775541,false,0.839671377,0.011978786,0.048935479,false,0.208482577,0.532412798,0.868316455,false,-0.244498735,0.471148939,0.656127596,false,0.638405344,0.041966967,0.189638148,false,"chr_001",2786185,2792079,"+","MS01G03180","--","K16252 DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6] | (RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like (A)","ko03020: RNA polymerase","DNA-directed RNA polymerases IV and V subunit 2-like [Malus domestica]","NRPD2_ARATH RecName: Full=DNA-directed RNA polymerases IV and V subunit 2; EC=2.7.7.6; AltName: Full=DNA-directed RNA polymerase D subunit 2a; Short=AtNRPD2a; Short=Nuclear RNA polymerase D 2a; AltName: Full=Nuclear RNA polymerase E 2; AltName: Full=Protein DEFECTIVE IN MERISTEM SILENCING 2; AltName: Full=Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 2; AltName: Full=RNA polymerase IV subunit 2a; Short=POL IV 2a;","A0A498HS32_MALDO RecName: Full=DNA-directed RNA polymerase subunit beta {ECO:0000256|RuleBase:RU363031}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU363031};","RNA polymerase II, second largest subunit","GO:0000792,heterochromatin; GO:0005634,nucleus; GO:0030880,RNA polymerase complex; GO:0005665,RNA polymerase II, core complex; GO:0000418,RNA polymerase IV complex; GO:0000419,RNA polymerase V complex; GO:0003677,DNA binding; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0046872,metal ion binding; GO:0032549,ribonucleoside binding; GO:0050832,defense response to fungus; GO:0006306,DNA methylation; GO:0031047,gene silencing by RNA; GO:0035194,post-transcriptional gene silencing by RNA; GO:0050776,regulation of immune response; GO:0030422,siRNA processing; GO:0006351,DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034062,5'-3' RNA polymerase activity; GO:0097747,RNA polymerase activity; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0043167,ion binding; GO:0043169,cation binding; GO:0001882,nucleoside binding; GO:0036094,small molecule binding; GO:0097367,carbohydrate derivative binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006304,DNA modification; GO:0006305,DNA alkylation; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0032259,methylation; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043414,macromolecule methylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044728,DNA methylation or demethylation; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0009892,negative regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010605,negative regulation of macromolecule metabolic process; GO:0010629,negative regulation of gene expression; GO:0019222,regulation of metabolic process; GO:0048519,negative regulation of biological process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0010608,post-transcriptional regulation of gene expression; GO:0016441,post-transcriptional gene silencing; GO:0002376,immune system process; GO:0002682,regulation of immune system process; GO:0006955,immune response; GO:0048583,regulation of response to stimulus; GO:0006396,RNA processing; GO:0016070,RNA metabolic process; GO:0034470,ncRNA processing; GO:0034660,ncRNA metabolic process; GO:0070918,small regulatory ncRNA processing; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0097659,nucleic acid-templated transcription; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0000785,chromatin; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005694,chromosome; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0032991,protein-containing complex; GO:0061695,transferase complex, transferring phosphorus-containing groups; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex; GO:0000428,DNA-directed RNA polymerase complex; GO:0005654,nucleoplasm; GO:0016591,RNA polymerase II, holoenzyme; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043233,organelle lumen; GO:0055029,nuclear DNA-directed RNA polymerase complex; GO:0070013,intracellular organelle lumen; GO:0140513,nuclear protein-containing complex","PF00562.31:RNA polymerase Rpb2, domain 6","--","--","--"]
["MS01G03190",10.4079,9.8968,11.0241,18.2074,17.6036,20.0731,19.0038,14.5075,17.5087,14.5623,15.4341,16.8318,16.9185,14.8556,15.3259,479,454,497,613,708,776,664,474,728,544,608,784,611,535,553,0.767374002,"3.68233E-09","2.78873E-08",false,0.882641636,"2.78582E-10","1.72036E-09",false,1.048546911,"6.2226E-16","7.30861E-15","up",0.987478795,"9.28596E-10","5.17918E-09",false,0.232993901,0.147492934,0.265775456,false,0.119891218,0.474338655,0.66112455,false,-0.063733114,0.691369597,0.921069037,false,0.298785523,0.023280155,0.077365227,false,0.191527274,0.178536778,0.449744021,false,"chr_001",2793878,2799935,"-","MS01G03190","--","K16860 phospholipase D3/4 [EC:3.1.4.4] | (RefSeq) LOW QUALITY PROTEIN: phospholipase D Z-like (A)","ko00564: Glycerophospholipid metabolism; ko00565: Ether lipid metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","hypothetical protein DVH24_012767 [Malus domestica]","HIBC5_ARATH RecName: Full=3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial; EC=3.1.2.-; Flags: Precursor;","A0A498HW03_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73083.1};","Enoyl-CoA hydratase","GO:0005739,mitochondrion; GO:0003860,3-hydroxyisobutyryl-CoA hydrolase activity; GO:0006574,valine catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016289,CoA hydrolase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016790,thiolester hydrolase activity; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006573,valine metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009063,cellular amino acid catabolic process; GO:0009081,branched-chain amino acid metabolic process; GO:0009083,branched-chain amino acid catabolic process; GO:0009987,cellular process; GO:0016054,organic acid catabolic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044281,small molecule metabolic process; GO:0044282,small molecule catabolic process; GO:0046395,carboxylic acid catabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901605,alpha-amino acid metabolic process; GO:1901606,alpha-amino acid catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF16113.8:Enoyl-CoA hydratase/isomerase","--","--","--"]
["MS01G03200",7.3523,6.6696,8.1957,0.6739,1.4667,1.1737,1.0389,1.1309,1.3251,2.9499,4.0809,3.34,1.4359,2.4299,2.066,522,472,570,35,91,70,56,57,85,170,248,240,80,135,115,-0.915506278,"8.08271E-08","5.01896E-07",false,-1.614619485,"3.62294E-14","3.35352E-13","down",-2.517304235,"1.57419E-18","2.33859E-17","down",-2.382495559,"7.46346E-34","2.34217E-32","down",-1.455216283,"2.00416E-10","3.6517E-09","down",-0.754016689,0.007016459,0.032152089,false,0.129517953,0.718412797,0.928445811,false,-1.584631548,"8.15979E-07","1.3763E-05","down",-0.876792899,0.01473986,0.093964914,false,"chr_001",2802182,2807131,"-","MS01G03200","--","--","--","BTB/POZ domain-containing protein NPY1 [Malus domestica]","NPY1_ARATH RecName: Full=BTB/POZ domain-containing protein NPY1; AltName: Full=Protein ENHANCER OF PINOID; AltName: Full=Protein MACCHI-BOU 4; AltName: Full=Protein NAKED PINS IN YUC MUTANTS 1;","A0A5N5G907_9ROSA SubName: Full=BTB/POZ domain-containing protein NPY1-like {ECO:0000313|EMBL:KAB2609912.1};","--","GO:0005770,late endosome; GO:0005886,plasma membrane; GO:0045176,apical protein localization; GO:0010540,basipetal auxin transport; GO:0048825,cotyledon development; GO:0009908,flower development; GO:0010229,inflorescence development; GO:0009911,positive regulation of flower development; GO:0016567,protein ubiquitination; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0033036,macromolecule localization; GO:0051179,localization; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0006810,transport; GO:0009914,hormone transport; GO:0009926,auxin polar transport; GO:0010817,regulation of hormone levels; GO:0051234,establishment of localization; GO:0060918,auxin transport; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0009793,embryo development ending in seed dormancy; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0099402,plant organ development; GO:0090567,reproductive shoot system development; GO:0009909,regulation of flower development; GO:0048518,positive regulation of biological process; GO:0048580,regulation of post-embryonic development; GO:0048582,positive regulation of post-embryonic development; GO:0048831,regulation of shoot system development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051094,positive regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0051240,positive regulation of multicellular organismal process; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:2000243,positive regulation of reproductive process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery","PF03000.17:NPH3 family","--","--","--"]
["MS01G03230",7.8866,6.6057,5.0226,0.1978,0,0.0861,0,0,0.4805,0.624,2.2823,1.2868,0.0922,0.2774,0.2769,109,91,68,2,0,1,0,0,6,7,27,18,1,3,3,-2.047710099,"3.70523E-06","1.74463E-05","down",-4.629980808,"8.32949E-13","6.74419E-12","down",-5.978857638,"5.7493E-11","4.02844E-10","down",-4.928828571,"2.4536E-11","1.62463E-10","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",2830388,2831083,"+","MS01G03230","--","--","--","early nodulin-like protein 1 [Malus sylvestris]","ENL1_ARATH RecName: Full=Early nodulin-like protein 1; AltName: Full=Phytocyanin-like protein; Flags: Precursor;","A0A540KNH2_MALBA RecName: Full=Phytocyanin domain-containing protein {ECO:0000259|PROSITE:PS51485};","--","GO:0031225,anchored component of membrane; GO:0046658,anchored component of plasma membrane; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0099503,secretory vesicle; GO:0005773,vacuole; GO:0009055,electron transfer activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0031226,intrinsic component of plasma membrane; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle","PF02298.20:Plastocyanin-like domain","--","--","--"]
["MS01G03240",7.2019,7.8275,11.6407,15.4851,12.9627,15.2721,11.9566,9.1936,11.6252,13.7711,15.5132,20.8291,13.5756,20.1329,15.5013,96,104,152,151,151,171,121,87,140,149,177,281,142,210,162,1.100995259,"2.99133E-05",0.000118193,"up",1.178974918,"3.91498E-06","1.39945E-05","up",0.929701847,0.000187764,0.000506175,false,0.585795319,0.025207918,0.043763747,false,-0.502969643,0.036420552,0.089294166,false,-0.578437723,0.014591123,0.056846422,false,-0.34535948,0.103407481,0.535519392,false,-0.154389448,0.495093139,0.677257107,false,-0.224521484,0.31169219,0.603400203,false,"chr_001",2833246,2872225,"-","MS01G03240","--","--","--","nucleoid-associated protein At2g24020, chloroplastic-like isoform X2 [Malus sylvestris]","EBFC2_ARATH RecName: Full=Nucleoid-associated protein At2g24020, chloroplastic {ECO:0000305}; AltName: Full=Suppressor of tic40 protein 2 {ECO:0000303|PubMed:28684427}; Flags: Precursor;","A0A540KP28_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD75762.1};","--","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0009535,chloroplast thylakoid membrane; GO:0005773,vacuole; GO:0003677,DNA binding; GO:0045037,protein import into chloroplast stroma; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006605,protein targeting; GO:0006810,transport; GO:0006886,intracellular protein transport; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0033365,protein localization to organelle; GO:0045036,protein targeting to chloroplast; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0055085,transmembrane transport; GO:0065002,intracellular protein transmembrane transport; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0071806,protein transmembrane transport; GO:0072594,establishment of protein localization to organelle; GO:0072596,establishment of protein localization to chloroplast; GO:0072598,protein localization to chloroplast; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0009534,chloroplast thylakoid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane","PF02575.19:YbaB/EbfC DNA-binding family","--","--","--"]
["MS01G03270",12.5129,9.8246,12.3294,33.1684,29.7577,31.6064,29.3804,22.5302,21.9193,22.6543,28.3476,27.5225,26.3455,30.3128,21.5113,115,90,111,223,239,244,205,147,182,169,223,256,190,218,155,1.364703801,"6.83619E-12","7.28774E-11","up",1.466447452,"5.74713E-11","3.81553E-10","up",1.661682266,"7.11802E-17","9.07609E-16","up",1.376865966,"6.69991E-09","3.36296E-08","up",0.023433088,0.912653764,0.947511322,false,-0.07603942,0.745159652,0.85655907,false,-0.288858787,0.168863722,0.6250451,false,0.313512141,0.076211144,0.18914196,false,0.220727829,0.2781112,0.56927095,false,"chr_001",2886641,2887671,"-","MS01G03270","--","--","--","uncharacterized protein LOC103442137 [Malus domestica]","--","A0A540KNG9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD75765.1};","--","--","--","--","--","--"]
["MS01G03280",22.6926,20.6321,28.6674,95.484,68.5969,91.2613,68.4673,41.4545,52.7733,83.3756,102.1525,106.2004,82.8097,114.2471,103.2037,960,870,1188,2955,2536,3243,2199,1245,2017,2863,3699,4547,2749,3782,3423,2.20488545,"3.14957E-42","3.05157E-40","up",2.353152634,"9.13647E-42","4.88E-40","up",2.039906847,"5.98236E-27","1.70029E-25","up",1.464255876,"7.05513E-11","4.44682E-10","up",-0.729589319,0.000644568,0.00296224,false,-0.875590235,"6.8291E-05",0.000700003,false,-0.578647024,0.011197364,0.213347849,false,-0.14882854,0.377442611,0.567743928,false,-0.2894009,0.115574726,0.352032994,false,"chr_001",2888961,2893899,"-","MS01G03280","--","K17499 protein phosphatase 1G [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 60 (A)","--","probable protein phosphatase 2C 60 [Malus domestica]","P2C60_ARATH RecName: Full=Probable protein phosphatase 2C 60; Short=AtPP2C60; EC=3.1.3.16;","A0A5N5G801_9ROSA RecName: Full=Protein-serine/threonine phosphatase {ECO:0000256|ARBA:ARBA00013081}; EC=3.1.3.16 {ECO:0000256|ARBA:ARBA00013081};","Serine/threonine protein phosphatase","GO:0005886,plasma membrane; GO:0046872,metal ion binding; GO:0017018,myosin phosphatase activity; GO:0006470,protein dephosphorylation; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0004721,phosphoprotein phosphatase activity; GO:0004722,protein serine/threonine phosphatase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016311,dephosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF00481.24:Protein phosphatase 2C","--","--","--"]
["MS01G03290",0.9806,1.4054,1.1798,3.0639,1.603,2.8768,3.0446,1.7759,0.814,1.2081,1.8003,0.8305,1.205,1.2084,1.3401,28,40,33,64,40,69,66,36,21,28,44,24,27,27,30,0.28200477,0.495010969,0.592805525,false,0.366467405,0.311113682,0.390123746,false,1.284215236,0.000537627,0.001329824,"up",0.954426142,0.061063494,0.095854736,false,0.677745714,0.220000096,0.358950185,false,0.598103813,0.233573188,0.422241367,false,-0.335728531,0.508337257,0.858568106,false,1.015273744,0.016508641,0.059607072,false,0.941256129,0.009755132,0.070987856,false,"chr_001",2897068,2898600,"-","MS01G03290","--","K03798 cell division protease FtsH [EC:3.4.24.-] | (RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic (A)","--","pentatricopeptide repeat-containing protein At3g29230-like [Malus domestica]","PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065;","A0A5N5G8L7_9ROSA SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:KAB2609900.1};","FOG: PPR repeat","GO:0008270,zinc ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding","PF01535.23:PPR repeat","--","--","--"]
["MS01G03340",2.0872,1.8863,2.0426,3.4662,2.9411,4.2919,3.9761,2.9157,2.7685,1.4238,1.592,1.3294,1.253,1.4769,1.2761,121,109,116,147,149,209,175,120,145,67,79,78,57,67,58,-0.286174814,0.198516134,0.282416247,false,-0.294853206,0.205105746,0.27352063,false,1.038796084,"1.40967E-06","5.43539E-06","up",0.968937837,"6.40042E-05",0.000183442,false,1.265803153,"1.03966E-06","9.59474E-06","up",1.277582904,"1.13717E-06","2.0541E-05","up",-0.072297794,0.770983822,0.944224513,false,1.340681769,"1.25221E-08","3.33602E-07","up",1.358246108,"1.24939E-08","1.08901E-06","up","chr_001",2950392,2953373,"-","MS01G03340","--","K11366 ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] | (RefSeq) ubiquitin C-terminal hydrolase 22-like (A)","--","ubiquitin C-terminal hydrolase 22-like [Malus domestica]","UBP22_ARATH RecName: Full=Ubiquitin C-terminal hydrolase 22 {ECO:0000305}; EC=3.4.19.12 {ECO:0000305}; AltName: Full=Deubiquitinating enzyme 22 {ECO:0000305}; Short=AtUBP22 {ECO:0000303|PubMed:11115897}; AltName: Full=Ubiquitin thioesterase 22 {ECO:0000305}; AltName: Full=Ubiquitin-specific-processing protease 22 {ECO:0000305};","A0A498HV79_MALDO RecName: Full=Ubiquitinyl hydrolase 1 {ECO:0000256|ARBA:ARBA00012759}; EC=3.4.19.12 {ECO:0000256|ARBA:ARBA00012759};","Ubiquitin-specific protease","GO:0070461,SAGA-type complex; GO:0004843,cysteine-type deubiquitinase activity; GO:0008270,zinc ion binding; GO:0016579,protein deubiquitination; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0019783,ubiquitin-like protein peptidase activity; GO:0101005,deubiquitinase activity; GO:0140096,catalytic activity, acting on a protein; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070646,protein modification by small protein removal; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009987,cellular process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0000123,histone acetyltransferase complex; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0031248,protein acetyltransferase complex; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902493,acetyltransferase complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF00443.32:Ubiquitin carboxyl-terminal hydrolase","--","--","--"]
["MS01G03350",45.8542,61.6976,62.642,103.9176,82.4254,79.9359,97.3574,96.6646,85.1862,65.7688,63.7826,63.5098,54.0366,59.7445,59.744,1023,1372,1369,1696,1607,1498,1649,1531,1717,1191,1218,1434,946,1043,1045,0.372104368,0.021377603,0.042517805,false,0.321792509,0.039461862,0.064614725,false,0.86451349,"1.34848E-05","4.44263E-05",false,1.002989014,"1.73004E-08","8.24289E-08","up",0.642819148,"8.01999E-06","6.07833E-05",false,0.695191242,"9.31099E-07","1.72581E-05",false,0.135989936,0.460024335,0.834829711,false,0.50960091,0.003002487,0.015296408,false,0.567718431,0.000741917,0.010755466,false,"chr_001",2956430,2957383,"-","MS01G03350","--","K17278 membrane-associated progesterone receptor component | (RefSeq) probable steroid-binding protein 3 (A)","--","probable steroid-binding protein 3 [Malus domestica]","SBP3_ARATH RecName: Full=Probable steroid-binding protein 3; Short=AtMP3; AltName: Full=Membrane-associated progesterone-binding protein 2 {ECO:0000303|Ref.5}; Short=AtMAPR2 {ECO:0000303|Ref.5};","A0A498HQR4_MALDO RecName: Full=Cytochrome b5 heme-binding domain-containing protein {ECO:0000259|SMART:SM01117};","Putative steroid membrane receptor Hpr6.6/25-Dx","GO:0005829,cytosol; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0005634,nucleus; GO:0005773,vacuole; GO:0005496,steroid binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0008289,lipid binding; GO:0097159,organic cyclic compound binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00173.31:Cytochrome b5-like Heme/Steroid binding domain","--","--","--"]
["MS01G03380",70.7233,62.4976,73.0781,7.318,6.1766,9.7969,5.7403,4.1132,7.2723,6.6771,10.4671,8.8962,6.4558,7.944,8.4084,3197,2816,3236,242,244,372,197,132,297,245,405,407,229,281,298,-2.804696427,"4.58012E-61","1.08278E-58","down",-2.885992029,"3.5468E-86","8.31442E-84","down",-2.939793477,"4.63501E-57","5.75244E-55","down",-3.309801936,"1.78045E-60","1.71975E-58","down",-0.493396727,0.054646686,0.123188141,false,-0.408174421,0.085408105,0.210993406,false,-0.371361209,0.154636681,0.609093148,false,-0.119583074,0.61016584,0.765931622,false,-0.029656258,0.889554951,0.960113864,false,"chr_001",2966329,2969697,"-","MS01G03380","--","K03715 1,2-diacylglycerol 3-beta-galactosyltransferase [EC:2.4.1.46] | (RefSeq) probable monogalactosyldiacylglycerol synthase, chloroplastic (A)","ko00561: Glycerolipid metabolism; ko01100: Metabolic pathways","probable monogalactosyldiacylglycerol synthase, chloroplastic [Malus domestica]","MGDG_SOYBN RecName: Full=Probable monogalactosyldiacylglycerol synthase, chloroplastic; Short=GmMGD1; EC=2.4.1.46; AltName: Full=MGDG synthase type A; Flags: Precursor;","A0A498HQE8_MALDO RecName: Full=ER membrane protein complex subunit 4 {ECO:0000256|ARBA:ARBA00020820}; EC=2.4.1.46 {ECO:0000256|ARBA:ARBA00012615};","--","GO:0031969,chloroplast membrane; GO:0046509,1,2-diacylglycerol 3-beta-galactosyltransferase activity; GO:0009247,glycolipid biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0008378,galactosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0035250,UDP-galactosyltransferase activity; GO:0006629,lipid metabolic process; GO:0006643,membrane lipid metabolic process; GO:0006664,glycolipid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0046467,membrane lipid biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903509,liposaccharide metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF06925.14:Monogalactosyldiacylglycerol (MGDG) synthase","--","--","--"]
["MS01G03390",21.0384,24.1745,22.4087,10.6676,5.6922,9.1817,7.2735,12.7925,13.3861,11.076,9.9702,7.1245,7.7349,8.3399,10.7686,461,528,481,171,109,169,121,199,265,197,187,158,133,143,185,-1.076268687,"6.16854E-07","3.2999E-06","down",-1.042237378,"1.01808E-08","5.2008E-08","down",-1.199405392,"1.13371E-06","4.42983E-06","down",-0.736352142,0.002601049,0.00559032,false,0.351463703,0.249194125,0.393540241,false,0.323301344,0.245476344,0.436123965,false,0.464958778,0.150268166,0.604248668,false,-0.10943975,0.720180696,0.841400109,false,-0.133313537,0.630950442,0.838641196,false,"chr_001",2976027,2976963,"-","MS01G03390","--","--","--","hypothetical protein DVH24_012752 [Malus domestica]","VQ4_ARATH RecName: Full=VQ motif-containing protein 4 {ECO:0000303|PubMed:22535423}; Short=AtVQ4 {ECO:0000303|PubMed:22535423}; AltName: Full=MPK3/6-targeted VQ-motif-containing protein 1 {ECO:0000303|PubMed:24750137};","A0A498HNF9_MALDO RecName: Full=VQ domain-containing protein {ECO:0000259|Pfam:PF05678};","--","GO:0005634,nucleus; GO:0006952,defense response; GO:0051245,negative regulation of cellular defense response; GO:0043433,negative regulation of DNA-binding transcription factor activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0006968,cellular defense response; GO:0010185,regulation of cellular defense response; GO:0031347,regulation of defense response; GO:0031348,negative regulation of defense response; GO:0048519,negative regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044092,negative regulation of molecular function; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051090,regulation of DNA-binding transcription factor activity; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065009,regulation of molecular function; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF05678.17:VQ motif","--","--","--"]
["MS01G03410",7.0086,8.6335,9.0113,1.6978,1.4213,1.6899,1.1101,1.812,2.0621,4.2626,6.6334,4.3829,3.5048,2.7777,2.8289,158,194,199,28,28,32,19,29,42,78,128,100,62,49,50,-0.509553908,0.034289051,0.063864601,false,-1.140063027,"1.79974E-06","6.76751E-06","down",-2.146369563,"1.57461E-15","1.77791E-14","down",-2.020138394,"4.8818E-12","3.46951E-11","down",-1.500176127,"1.73758E-05",0.000121871,"down",-0.864870141,0.015124544,0.058341443,false,0.123188237,0.756121145,0.939812052,false,-1.621352078,"5.85059E-07","1.02709E-05","down",-0.980341156,0.002566504,0.027038527,false,"chr_001",2983223,2984782,"-","MS01G03410","--","K26095 spindle and kinetochore-associated protein 2 | (RefSeq) uncharacterized protein LOC103442365 (A)","--","uncharacterized protein LOC103442365 [Malus domestica]","--","A0A498HNN0_MALDO RecName: Full=Spindle and kinetochore-associated protein 2 {ECO:0000256|ARBA:ARBA00017139}; AltName: Full=Protein FAM33A {ECO:0000256|ARBA:ARBA00029651};","--","GO:0005737,cytoplasm; GO:0000940,outer kinetochore; GO:0005876,spindle microtubule; GO:0008017,microtubule binding; GO:0051301,cell division; GO:0007059,chromosome segregation; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0015631,tubulin binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0000775,chromosome, centromeric region; GO:0000776,kinetochore; GO:0000779,condensed chromosome, centromeric region; GO:0000793,condensed chromosome; GO:0005694,chromosome; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0098687,chromosomal region; GO:0099080,supramolecular complex; GO:0005819,spindle; GO:0005856,cytoskeleton; GO:0005874,microtubule; GO:0015630,microtubule cytoskeleton; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber","PF16740.8:Spindle and kinetochore-associated protein 2","--","--","--"]
["MS01G03430",17.0909,19.287,19.0691,31.4918,17.9729,17.5635,25.0231,23.4989,39.2165,8.8641,11.6409,9.0827,18.9744,12.7624,10.6535,753,847,823,1015,692,650,837,735,1561,317,439,405,656,440,368,-0.72318757,"1.97779E-06","9.75397E-06",false,-0.088456913,0.703548258,0.762706632,false,0.491374246,0.063079489,0.098016884,false,0.936356882,"5.6021E-06","1.89389E-05",false,1.672840952,"3.07766E-13","8.24247E-12","up",1.042773415,0.000172758,0.001540681,"up",0.446168362,0.138065259,0.590660014,false,1.229544194,"9.84772E-06",0.000122073,"up",0.604964729,0.055229764,0.224795684,false,"chr_001",2994249,2996579,"-","MS01G03430","--","K13071 pheophorbide a oxygenase [EC:1.14.15.17] | (RefSeq) pheophorbide a oxygenase, chloroplastic (A)","ko00860: Porphyrin metabolism; ko01110: Biosynthesis of secondary metabolites","protein TIC 55, chloroplastic-like [Malus domestica]","TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske iron-sulfur protein TIC55; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 55; Short=PsTIC55; Flags: Precursor;","A0A498HS10_MALDO RecName: Full=Rieske domain-containing protein {ECO:0000259|PROSITE:PS51296};","--","GO:0009706,chloroplast inner membrane; GO:0016021,integral component of membrane; GO:0051537,2 iron, 2 sulfur cluster binding; GO:0010277,chlorophyllide a oxygenase [overall] activity; GO:0046872,metal ion binding; GO:0015031,protein transport; GO:0003674,molecular_function; GO:0005488,binding; GO:0051536,iron-sulfur cluster binding; GO:0051540,metal cluster binding; GO:0003824,catalytic activity; GO:0004497,monooxygenase activity; GO:0016491,oxidoreductase activity; GO:0016701,oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; GO:0016703,oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases); GO:0043167,ion binding; GO:0043169,cation binding; GO:0006810,transport; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009528,plastid inner membrane; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031969,chloroplast membrane; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF00355.29:Rieske [2Fe-2S] domain","--","--","--"]
["MS01G03450",0.8154,0.8561,0.8518,0.6221,0.5642,0.8353,0.6494,0.828,0.9865,0.4205,0.3988,0.5246,0.29,0.1939,0.387,43,45,44,24,26,37,26,31,47,18,18,28,12,8,16,-0.715982309,0.04681219,0.083434682,false,-1.242311399,0.003856503,0.008046732,"down",-0.109707009,0.749885347,0.799587147,false,0.248985927,0.455480176,0.537101559,false,0.979184771,0.01337192,0.039062399,false,1.506705707,0.001095164,0.007112525,"up",0.358546291,0.338259597,0.771212822,false,0.624327603,0.131270368,0.279386755,false,1.156355049,0.015374339,0.096961533,false,"chr_001",3004134,3006388,"+","MS01G03450","--","no KO assigned | (RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g50270-like (A)","--","hypothetical protein DVH24_012746 [Malus domestica]","PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g25970;","A0A498HSV5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73062.1};","FOG: PPR repeat","GO:0043231,intracellular membrane-bounded organelle; GO:0003723,RNA binding; GO:0009451,RNA modification; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016070,RNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0110165,cellular anatomical entity","PF13041.9:PPR repeat family","--","--","--"]
["MS01G03460",382.4058,422.8349,434.9454,103.0687,62.7512,72.8466,92.6322,71.9328,75.4069,192.8882,247.5075,183.0445,167.9145,215.0576,186.4717,17036,18776,18981,3359,2443,2726,3133,2275,3035,6975,9438,8253,5870,7497,6513,-0.808100901,"2.0665E-08","1.40287E-07",false,-0.831174141,"1.37618E-10","8.8021E-10",false,-2.162542719,"1.52898E-24","3.69362E-23","down",-2.083011522,"2.62391E-40","1.10101E-38","down",-1.264161469,"4.57933E-12","1.04988E-10","down",-1.237959338,"2.50032E-13","1.74725E-11","down",0.077922582,0.734639126,0.933363118,false,-1.339661089,"5.23328E-09","1.50819E-07","down",-1.307647683,"1.67812E-09","1.89854E-07","down","chr_001",3012147,3015861,"+","MS01G03460","--","K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) aspartyl protease family protein 2-like (A)","--","aspartyl protease family protein At5g10770-like [Malus domestica]","ASPA_ARATH RecName: Full=Aspartyl protease family protein At5g10770; EC=3.4.23.- {ECO:0000305}; Flags: Precursor;","A0A540KNI9_MALBA RecName: Full=Peptidase A1 domain-containing protein {ECO:0000259|PROSITE:PS51767};","Aspartyl protease","GO:0031225,anchored component of membrane; GO:0005886,plasma membrane; GO:0004190,aspartic-type endopeptidase activity; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF14543.9:Xylanase inhibitor N-terminal","--","--","--"]
["MS01G03470",3.3813,2.3395,3.0649,0.0797,0.0667,0.0347,0.0384,0,0,0.7541,1.1238,0.6624,0.1486,0.1863,0.1487,116,80,103,2,2,1,1,0,0,21,33,23,4,5,4,-1.613917891,"1.30612E-06","6.64211E-06","down",-3.891586626,"1.10501E-14","1.06871E-13","down",-5.400892446,"9.99751E-14","9.46554E-13","down",-7.501712806,"9.40318E-10","5.23866E-09","down",-5.879790263,"6.94233E-06","5.35008E-05","down","NA","NA","NA","NA","NA","NA","NA","NA",-3.770207988,"6.73532E-06","8.78656E-05","down","NA","NA","NA","NA","chr_001",3016297,3018237,"+","MS01G03470","--","K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) aspartyl protease family protein 2-like (A)","--","aspartyl protease family protein At5g10770-like [Malus sylvestris]","ASPA_ARATH RecName: Full=Aspartyl protease family protein At5g10770; EC=3.4.23.- {ECO:0000305}; Flags: Precursor;","A0A540KNH6_MALBA RecName: Full=Peptidase A1 domain-containing protein {ECO:0000259|PROSITE:PS51767};","Aspartyl protease","GO:0031225,anchored component of membrane; GO:0005886,plasma membrane; GO:0004190,aspartic-type endopeptidase activity; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF14543.9:Xylanase inhibitor N-terminal","--","--","--"]
["MS01G03480",17.5753,16.3731,18.6825,2.0378,2.4691,3.5261,2.1186,3.1498,1.5415,21.8217,23.8102,11.1636,6.3242,9.1245,10.2578,896,832,933,76,110,151,82,114,71,903,1039,576,253,364,410,0.29859267,0.278998549,0.373637548,false,-0.744482739,"9.88142E-05",0.000280265,false,-2.499666583,"1.40052E-31","5.29389E-30","down",-2.664109708,"4.19707E-23","6.96002E-22","down",-2.94868384,"8.00688E-16","2.82188E-14","down",-1.904498317,"8.28795E-10","3.02975E-08","down",-0.160322875,0.65265887,0.909337882,false,-2.786966276,"9.43358E-17","9.91819E-15","down",-1.732013592,"1.79421E-10","2.75564E-08","down","chr_001",3019621,3022178,"+","MS01G03480","--","K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) aspartyl protease family protein 2-like (A)","--","aspartyl protease family protein At5g10770-like [Malus domestica]","ASPA_ARATH RecName: Full=Aspartyl protease family protein At5g10770; EC=3.4.23.- {ECO:0000305}; Flags: Precursor;","A0A498HV69_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73061.1};","Aspartyl protease","GO:0031225,anchored component of membrane; GO:0005886,plasma membrane; GO:0004190,aspartic-type endopeptidase activity; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF14543.9:Xylanase inhibitor N-terminal","--","--","--"]
["MS01G03530",95.69,125.0058,146.4515,68.0818,48.1565,67.5721,44.7179,34.3719,51.8979,86.011,107.6279,91.4037,95.805,102.6646,85.214,3247,4228,4868,1690,1428,1926,1152,828,1591,2369,3126,3139,2551,2726,2267,-0.178307699,0.315516334,0.413271717,false,-0.075208502,0.67023757,0.73340522,false,-0.785451882,0.000179715,0.000486105,false,-1.204885444,"5.09798E-09","2.58858E-08","down",-1.014144919,"1.70849E-08","2.24995E-07","down",-1.113323913,"8.5051E-10","3.09279E-08","down",-0.41976219,0.04050211,0.372982923,false,-0.591891744,0.000692253,0.004618326,false,-0.685583786,"8.24496E-05",0.001882486,false,"chr_001",3062378,3063917,"-","MS01G03530","--","K12130 pseudo-response regulator 5 | (RefSeq) two-component response regulator-like APRR3 (A)","ko04712: Circadian rhythm - plant","zinc finger protein CONSTANS-LIKE 4-like [Malus sylvestris]","COL4_ARATH RecName: Full=Zinc finger protein CONSTANS-LIKE 4;","B3GCI6_MALDO SubName: Full=CONSTANS-like 1 {ECO:0000313|EMBL:ACD69427.1};","GATA-4/5/6 transcription factors","GO:0005634,nucleus; GO:0008270,zinc ion binding; GO:0009909,regulation of flower development; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048580,regulation of post-embryonic development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048831,regulation of shoot system development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0061458,reproductive system development; GO:0065007,biological regulation; GO:0090567,reproductive shoot system development; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF06203.17:CCT motif","C2C2-CO-like","TF","C2C2->C2C2-CO-like"]
["MS01G03590",0.5066,0.3529,0.3591,0.0962,0.0483,0.1508,0.1297,0.0198,0.0934,0.3294,0.1808,0.2224,0.1793,0.1439,0.1974,36,25,25,5,3,9,7,1,6,19,11,16,10,8,11,-0.548025974,0.246882883,0.338183659,false,-0.936987144,0.059090951,0.092357362,false,-1.848647027,0.002291179,0.005003303,"down",-2.031210529,0.001991794,0.004388999,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",3186779,3190713,"-","MS01G03590","--","K14489 arabidopsis histidine kinase 2/3/4 (cytokinin receptor) [EC:2.7.13.3] | (RefSeq) histidine kinase 4 (A)","ko04075: Plant hormone signal transduction","histidine kinase 5-like [Malus domestica]","AHK5_ARATH RecName: Full=Histidine kinase 5; EC=2.7.13.3; AltName: Full=Arabidopsis histidine kinase 5; Short=AtHK5; AltName: Full=Protein AUTHENTIC HIS-KINASE 5; AltName: Full=Protein CYTOKININ-INDEPENDENT 2;","A0A498HNE4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73048.1};","Sensory transduction histidine kinase","GO:0005737,cytoplasm; GO:0005887,integral component of plasma membrane; GO:0000325,plant-type vacuole; GO:0005886,plasma membrane; GO:0009927,histidine phosphotransfer kinase activity; GO:0046872,metal ion binding; GO:0000155,phosphorelay sensor kinase activity; GO:0004673,protein histidine kinase activity; GO:0009738,abscisic acid-activated signaling pathway; GO:0070301,cellular response to hydrogen peroxide; GO:0071219,cellular response to molecule of bacterial origin; GO:0071732,cellular response to nitric oxide; GO:0009736,cytokinin-activated signaling pathway; GO:0006952,defense response; GO:0009873,ethylene-activated signaling pathway; GO:0009788,negative regulation of abscisic acid-activated signaling pathway; GO:0010105,negative regulation of ethylene-activated signaling pathway; GO:0046777,protein autophosphorylation; GO:0090333,regulation of stomatal closure; GO:0048364,root development; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0060089,molecular transducer activity; GO:0140096,catalytic activity, acting on a protein; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0016775,phosphotransferase activity, nitrogenous group as acceptor; GO:0140299,small molecule sensor activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0000302,response to reactive oxygen species; GO:0006950,response to stress; GO:0006979,response to oxidative stress; GO:0010035,response to inorganic substance; GO:0033554,cellular response to stress; GO:0034599,cellular response to oxidative stress; GO:0034614,cellular response to reactive oxygen species; GO:0042542,response to hydrogen peroxide; GO:0062197,cellular response to chemical stress; GO:0002237,response to molecule of bacterial origin; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0071216,cellular response to biotic stimulus; GO:0071241,cellular response to inorganic substance; GO:0071731,response to nitric oxide; GO:1901698,response to nitrogen compound; GO:1901699,cellular response to nitrogen compound; GO:1902170,cellular response to reactive nitrogen species; GO:0009735,response to cytokinin; GO:0071368,cellular response to cytokinin stimulus; GO:0000160,phosphorelay signal transduction system; GO:0009723,response to ethylene; GO:0035556,intracellular signal transduction; GO:0071369,cellular response to ethylene stimulus; GO:0009787,regulation of abscisic acid-activated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023057,negative regulation of signaling; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:1901419,regulation of response to alcohol; GO:1901420,negative regulation of response to alcohol; GO:1905957,regulation of cellular response to alcohol; GO:1905958,negative regulation of cellular response to alcohol; GO:0010104,regulation of ethylene-activated signaling pathway; GO:0070297,regulation of phosphorelay signal transduction system; GO:0070298,negative regulation of phosphorelay signal transduction system; GO:1902531,regulation of intracellular signal transduction; GO:1902532,negative regulation of intracellular signal transduction; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0010118,stomatal movement; GO:0010119,regulation of stomatal movement; GO:0090332,stomatal closure; GO:0007275,multicellular organism development; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0031224,intrinsic component of membrane; GO:0031226,intrinsic component of plasma membrane; GO:0071944,cell periphery; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF02518.29:Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase","Others","TR","Others"]
["MS01G03640",26.9128,31.4204,34.0063,6.9763,6.3646,11.5579,4.9891,3.5944,6.5977,17.0447,22.5451,20.4461,13.9219,19.1581,14.1884,1350,1571,1671,256,279,487,190,128,299,694,968,1038,548,752,558,-0.436776907,0.003088223,0.007734561,false,-0.673105084,"9.82912E-05",0.000279049,false,-1.686529351,"8.76127E-13","7.51406E-12","down",-2.324002253,"2.1217E-26","4.32629E-25","down",-1.874152957,"4.33611E-16","1.58726E-14","down",-1.635084368,"2.93877E-11","1.45223E-09","down",-0.638876759,0.030947384,0.333101116,false,-1.233959989,"2.74236E-07","5.2742E-06","down",-0.988923753,"9.75105E-05",0.002149061,false,"chr_001",3257864,3261218,"-","MS01G03640","--","K15397 3-ketoacyl-CoA synthase [EC:2.3.1.199] | (RefSeq) 3-ketoacyl-CoA synthase 10 (A)","ko00062: Fatty acid elongation; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko04626: Plant-pathogen interaction","3-ketoacyl-CoA synthase 10-like [Malus sylvestris]","KCS10_ARATH RecName: Full=3-ketoacyl-CoA synthase 10 {ECO:0000303|PubMed:18465198}; Short=KCS-10 {ECO:0000303|PubMed:18465198}; EC=2.3.1.199 {ECO:0000305}; AltName: Full=Protein FIDDLEHEAD {ECO:0000303|PubMed:10559443}; AltName: Full=Very long-chain fatty acid condensing enzyme 10 {ECO:0000303|PubMed:18465198}; Short=VLCFA condensing enzyme 10 {ECO:0000303|PubMed:18465198};","A0A498HST4_MALDO RecName: Full=3-ketoacyl-CoA synthase {ECO:0000256|PIRNR:PIRNR036417}; EC=2.3.1.- {ECO:0000256|PIRNR:PIRNR036417};","--","GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0005777,peroxisome; GO:0102756,very-long-chain 3-ketoacyl-CoA synthase activity; GO:0006633,fatty acid biosynthetic process; GO:0009409,response to cold; GO:0009416,response to light stimulus; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0009314,response to radiation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment; GO:0031224,intrinsic component of membrane; GO:0042579,microbody","PF08392.15:FAE1/Type III polyketide synthase-like protein","--","--","--"]
["MS01G03690",70.8457,70.2214,73.192,120.0278,117.8785,143.669,110.489,86.139,99.8759,105.9765,108.6488,117.9859,112.4697,134.2742,115.9519,4407,4354,4460,5462,6408,7507,5218,3804,5613,5351,5785,7428,5490,6536,5655,0.821614995,"2.75846E-16","4.65801E-15",false,1.051199903,"5.95857E-20","8.97035E-19","up",1.043947464,"8.74691E-20","1.44421E-18","up",0.752500999,"8.54781E-08","3.71888E-07",false,-0.056455398,0.693681749,0.800744627,false,-0.284219818,0.062835603,0.169495043,false,-0.294155953,0.053240327,0.414267978,false,0.239908282,0.047994443,0.1340567,false,0.017972857,0.894844781,0.962504552,false,"chr_001",3309238,3313772,"-","MS01G03690","--","--","--","pentatricopeptide repeat-containing protein At4g33170 [Malus sylvestris]","CID7_ARATH RecName: Full=Polyadenylate-binding protein-interacting protein 7; Short=PABP-interacting protein 7; Short=Poly(A)-binding protein-interacting protein 7; AltName: Full=PAM2-containing protein CID7; AltName: Full=Protein CTC-INTERACTING DOMAIN 7;","A0A498HQB7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73039.1};","Predicted MutS-related protein involved in mismatch repair","GO:0003729,mRNA binding; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding","PF08590.13:Domain of unknown function (DUF1771)","--","--","--"]
["MS01G03700",0.3421,0.6435,0.3929,2.6889,1.1254,3.1053,1.6897,1.3854,1.4199,0.8429,0.3497,0.5915,0.5449,0.8197,0.8181,8,15,9,46,23,61,30,23,30,16,7,14,10,15,15,"NA","NA","NA","NA","NA","NA","NA","NA",2.522989447,"2.7511E-06","1.01479E-05","up",1.987047443,"4.25719E-05",0.00012536,"up",1.43957445,0.003791449,0.0136329,"up",1.049861497,0.01931649,0.070427565,false,-0.534550835,0.227035636,0.684616256,false,1.975807684,0.000355671,0.002650676,"up",1.593718952,0.001422384,0.017600736,"up","chr_001",3316583,3317582,"+","MS01G03700","--","--","--","uncharacterized protein LOC103455756 [Malus domestica]","--","A0A498HND6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73038.1};","--","--","PF07911.16:Protein of unknown function (DUF1677)","--","--","--"]
["MS01G03730",1.0268,0.9695,0.5549,1.4035,1.5205,1.2223,1.432,2.8926,1.805,3.4972,1.1996,2.029,2.54,1.5437,3.3896,17,16,9,17,22,17,18,34,27,47,17,34,33,20,44,1.595429704,0.004423759,0.010684238,"up",1.837701303,0.00016323,0.000445223,"up","NA","NA","NA","NA",1.540464932,0.002693199,0.005772943,"up",-0.037177744,0.944589626,0.967363771,false,-0.281751498,0.543304868,0.717004894,false,0.623775661,0.185114661,0.642416095,false,-0.659105649,0.216399087,0.39317874,false,-0.897592409,0.049187248,0.20945954,false,"chr_001",3349273,3350376,"-","MS01G03730","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1-like (A)","ko04626: Plant-pathogen interaction","serine/threonine-protein kinase RIPK-like [Malus domestica]","RIPK_ARATH RecName: Full=Serine/threonine-protein kinase RIPK {ECO:0000305}; EC=2.7.11.1 {ECO:0000305|PubMed:21320696}; AltName: Full=ACIK1A/PBL14; AltName: Full=ACRE protein ortholog 264A {ECO:0000305}; Short=AtACRE264a {ECO:0000303|PubMed:15181213}; AltName: Full=PBS1-like protein 14 {ECO:0000303|PubMed:20413097}; AltName: Full=RPM1-induced protein kinase {ECO:0000303|PubMed:21320696};","A0A498HRX8_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","Serine/threonine protein kinase","GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0042742,defense response to bacterium; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G03760",9.7775,10.6641,10.147,4.9358,3.389,2.0286,3.0994,4.6861,6.1072,4.9982,2.3699,3.6479,3.464,2.7997,3.881,241,262,245,89,73,42,58,82,136,100,50,91,67,54,75,-1.276592108,"1.64052E-05","6.78977E-05","down",-1.299663808,"9.76183E-10","5.67924E-09","down",-1.34360984,"5.60076E-05",0.000165632,"down",-0.858934015,0.000854934,0.002010774,false,0.429777839,0.261469561,0.407176381,false,0.457386263,0.147547068,0.309346921,false,0.480451949,0.24112662,0.696743156,false,-0.046895079,0.915772474,0.956263867,false,-0.017697324,0.96318092,0.988757777,false,"chr_001",3364824,3366882,"+","MS01G03760","--","--","--","uncharacterized protein LOC126605347 isoform X1 [Malus sylvestris]","LPAAT_ARATH RecName: Full=1-acylglycerol-3-phosphate O-acyltransferase; EC=2.3.1.51; AltName: Full=Lipid droplet-binding protein CGI-58 homolog;","A0A5N5HIF3_9ROSA RecName: Full=AB hydrolase-1 domain-containing protein {ECO:0000259|Pfam:PF00561};","Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)","GO:0005737,cytoplasm; GO:0003841,1-acylglycerol-3-phosphate O-acyltransferase activity; GO:0052689,carboxylic ester hydrolase activity; GO:0016298,lipase activity; GO:0042171,lysophosphatidic acid acyltransferase activity; GO:0004623,phospholipase A2 activity; GO:0071456,cellular response to hypoxia; GO:0055089,fatty acid homeostasis; GO:0055088,lipid homeostasis; GO:0006654,phosphatidic acid biosynthetic process; GO:0055091,phospholipid homeostasis; GO:0070328,triglyceride homeostasis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008374,O-acyltransferase activity; GO:0016411,acylglycerol O-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0071617,lysophospholipid acyltransferase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0004620,phospholipase activity; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0006629,lipid metabolic process; GO:0006644,phospholipid metabolic process; GO:0006650,glycerophospholipid metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0008654,phospholipid biosynthetic process; GO:0009058,biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0045017,glycerolipid biosynthetic process; GO:0046473,phosphatidic acid metabolic process; GO:0046474,glycerophospholipid biosynthetic process; GO:0046486,glycerolipid metabolic process; GO:0071704,organic substance metabolic process; GO:0090407,organophosphate biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0055090,acylglycerol homeostasis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF00561.23:alpha/beta hydrolase fold","--","--","--"]
["MS01G03780",9.1508,7.7665,6.995,3.557,12.9774,2.1943,5.284,11.8207,6.2884,6.4382,2.4574,4.1994,3.2055,2.3277,5.1167,422,357,316,120,523,85,185,387,262,241,97,196,116,84,185,-0.667021254,0.055403198,0.096375082,false,-0.878971346,0.002293501,0.005019126,false,-0.103751196,0.85373814,0.884400475,false,0.255350386,0.427543576,0.509592202,false,0.938244659,0.028421985,0.072797641,false,1.14973852,0.002474867,0.013957,"up",0.350352206,0.681201095,0.917217942,false,0.588535688,0.345649231,0.536846569,false,0.80756924,0.334213966,0.625059956,false,"chr_001",3376522,3380355,"+","MS01G03780","--","--","--","fatty-acid-binding protein 2 [Malus domestica]","FAP2_ARATH RecName: Full=Fatty-acid-binding protein 2; Short=AtFAP2; AltName: Full=Chalcone-flavanone isomerase family protein 2;","A0A540MTA8_MALBA RecName: Full=Chalcone isomerase {ECO:0000256|ARBA:ARBA00012123}; EC=5.5.1.6 {ECO:0000256|ARBA:ARBA00012123};","--","GO:0009570,chloroplast stroma; GO:0005504,fatty acid binding; GO:0016872,intramolecular lyase activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0008289,lipid binding; GO:0031406,carboxylic acid binding; GO:0033293,monocarboxylic acid binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0003824,catalytic activity; GO:0016853,isomerase activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009532,plastid stroma; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF16035.8:Chalcone isomerase like","--","--","--"]
["MS01G03810",23.8533,19.7154,13.858,1.3255,1.4055,2.3087,0.7663,1.1837,1.1448,7.0082,9.9311,5.8762,4.0777,3.8827,2.6797,738,608,420,30,38,60,18,26,32,176,263,184,99,94,65,-1.15604755,"2.82731E-05",0.000112419,"down",-2.142962635,"4.87216E-15","4.89457E-14","down",-3.306246178,"3.26222E-26","8.84154E-25","down",-3.938340607,"3.3972E-36","1.19889E-34","down",-2.769383075,"2.1076E-17","9.01634E-16","down",-1.778710373,"2.20084E-07","4.73224E-06","down",-0.629811374,0.115327829,0.555604509,false,-2.136018748,"3.70638E-11","1.63374E-09","down",-1.138429011,0.000654393,0.009715293,"down","chr_001",3405983,3411128,"-","MS01G03810","--","K20718 LRR receptor-like serine/threonine-protein kinase ERECTA [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase ERECTA isoform X2 (A)","ko04016: MAPK signaling pathway - plant","LRR receptor-like serine/threonine-protein kinase ERECTA isoform X2 [Malus sylvestris]","ERECT_ARATH RecName: Full=LRR receptor-like serine/threonine-protein kinase ERECTA {ECO:0000303|PubMed:8624444}; EC=2.7.11.1; AltName: Full=Protein QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1; AltName: Full=Protein QUANTITATIVE RESISTANCE TO RALSTONIA SOLANACEARUM 1; AltName: Full=Protein TRANSPIRATION EFFICIENCY 1; Flags: Precursor;","A0A498HV22_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73031.1};","--","GO:0016021,integral component of membrane; GO:0005739,mitochondrion; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0042277,peptide binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0033612,receptor serine/threonine kinase binding; GO:0005102,signaling receptor binding; GO:0019199,transmembrane receptor protein kinase activity; GO:0070370,cellular heat acclimation; GO:0042742,defense response to bacterium; GO:0050832,defense response to fungus; GO:0048281,inflorescence morphogenesis; GO:0009965,leaf morphogenesis; GO:0010087,phloem or xylem histogenesis; GO:0009664,plant-type cell wall organization; GO:0009944,polarity specification of adaxial/abaxial axis; GO:0006468,protein phosphorylation; GO:0030155,regulation of cell adhesion; GO:0051302,regulation of cell division; GO:0001558,regulation of cell growth; GO:1905421,regulation of plant organ morphogenesis; GO:0010103,stomatal complex morphogenesis; GO:0010148,transpiration; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0033218,amide binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0005515,protein binding; GO:0004888,transmembrane signaling receptor activity; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009266,response to temperature stimulus; GO:0009408,response to heat; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0010286,heat acclimation; GO:0033554,cellular response to stress; GO:0034605,cellular response to heat; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0009620,response to fungus; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009791,post-embryonic development; GO:0010016,shoot system morphogenesis; GO:0010229,inflorescence development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0090698,post-embryonic plant morphogenesis; GO:0048366,leaf development; GO:0048827,phyllome development; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0009888,tissue development; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0003002,regionalization; GO:0007389,pattern specification process; GO:0009798,axis specification; GO:0009943,adaxial/abaxial axis specification; GO:0009955,adaxial/abaxial pattern specification; GO:0065001,specification of axis polarity; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0007155,cell adhesion; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0051301,cell division; GO:0016049,cell growth; GO:0040007,growth; GO:0040008,regulation of growth; GO:0051128,regulation of cellular component organization; GO:0022603,regulation of anatomical structure morphogenesis; GO:0050793,regulation of developmental process; GO:0010374,stomatal complex development; GO:0090558,plant epidermis development; GO:0090626,plant epidermis morphogenesis; GO:0006810,transport; GO:0006833,water transport; GO:0042044,fluid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0071944,cell periphery","PF13855.9:Leucine rich repeat","--","--","--"]
["MS01G03820",45.6347,45.6136,49.0589,14.6327,9.7348,15.091,8.8308,9.6025,10.1023,16.8663,19.7462,20.3185,14.5029,12.9596,16.0247,810,807,853,190,151,225,119,121,162,243,300,365,202,180,223,-1.114396674,"2.21765E-17","4.18479E-16","down",-1.396811897,"4.13017E-21","6.68455E-20","down",-1.623391101,"4.46605E-17","5.80645E-16","down",-2.014719147,"5.94241E-40","2.476E-38","down",-0.886544279,"4.74628E-07","4.74228E-06",false,-0.601944066,0.00186492,0.011072071,false,-0.391356389,0.086386157,0.501785193,false,-0.491396617,0.020956815,0.071451008,false,-0.20226552,0.364677064,0.651716239,false,"chr_001",3426980,3428311,"+","MS01G03820","--","K02221 YggT family protein | (RefSeq) ylmG homolog protein 2, chloroplastic-like (A)","--","ylmG homolog protein 2, chloroplastic-like [Malus sylvestris]","YLMG2_ARATH RecName: Full=YlmG homolog protein 2, chloroplastic {ECO:0000305}; Short=AtYLMG2 {ECO:0000303|PubMed:20359373}; AltName: Full=YGGT family protein YLMG2 {ECO:0000305}; Flags: Precursor;","A0A540MRL8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE01449.1};","--","GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0010020,chloroplast fission; GO:0090143,nucleoid organization; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009658,chloroplast organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0043572,plastid fission; GO:0048285,organelle fission; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF02325.20:YGGT family","--","--","--"]
["MS01G03830",4.3486,4.2416,4.5626,9.412,7.326,5.6084,6.5234,9.3584,9.493,5.0598,4.2337,3.7,5.2338,4.3223,4.7762,36,35,37,57,53,39,41,55,71,34,30,31,34,28,31,0.166783168,0.632719875,0.716544225,false,0.417867988,0.218091824,0.288250476,false,0.981105861,0.005193393,0.010547552,false,1.229907575,0.000104438,0.000287849,"up",1.07671157,0.00168006,0.006788592,"up",0.828564992,0.012446609,0.050341278,false,0.247977782,0.474322755,0.844473088,false,0.831036041,0.02876767,0.09110083,false,0.588831855,0.103349029,0.330559471,false,"chr_001",3429463,3429816,"+","MS01G03830","--","--","--","uncharacterized protein LOC103424632 [Malus domestica]","--","A0A498HNC9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73028.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G03840",4.3498,5.4381,4.3038,0.183,0,0.239,0.0881,0.0943,0.5185,1.3191,2.2673,1.3224,0.3411,0.3421,0.1707,65,81,63,2,0,3,1,1,7,16,29,20,4,4,2,-1.346366886,0.000175521,0.000596874,"down",-3.752675255,"4.11332E-11","2.78021E-10","down",-4.888336795,"5.8704E-11","4.10748E-10","down",-3.97113646,"2.82423E-10","1.67272E-09","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",3430190,3430828,"-","MS01G03840","--","--","--","uncharacterized protein LOC103455775 [Malus domestica]","--","A0A498HU64_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73027.1};","--","--","--","--","--","--"]
["MS01G03870",11.4835,7.8001,12.5667,19.8816,18.5349,16.7563,18.51,22.2494,21.2669,16.9549,20.8288,16.9314,17.4527,13.0478,17.867,514,348,551,651,725,630,629,707,860,616,798,767,613,457,627,0.966746446,"2.95118E-06","1.4146E-05",false,0.898750299,"5.64731E-05",0.000167105,false,1.012967028,"4.97661E-06","1.76049E-05","up",1.24777587,"2.69855E-09","1.42042E-08","up",0.292523031,0.06530965,0.14173626,false,0.364190995,0.050528747,0.144609766,false,0.232719713,0.183401194,0.642361956,false,0.062364215,0.718781476,0.840710744,false,0.139697447,0.481440189,0.744590958,false,"chr_001",3449786,3454144,"-","MS01G03870","--","K00279 cytokinin dehydrogenase [EC:1.5.99.12] | (RefSeq) cytokinin dehydrogenase 7 (A)","ko00908: Zeatin biosynthesis; ko01110: Biosynthesis of secondary metabolites","cytokinin dehydrogenase 7 [Malus domestica]","CKX7_ARATH RecName: Full=Cytokinin dehydrogenase 7; EC=1.5.99.12; AltName: Full=Cytokinin oxidase 7; Short=AtCKX5; Short=AtCKX7; Short=CKO7;","A0A498HRW8_MALDO RecName: Full=Cytokinin dehydrogenase {ECO:0000256|ARBA:ARBA00011928}; EC=1.5.99.12 {ECO:0000256|ARBA:ARBA00011928};","Proteins containing the FAD binding domain","GO:0019139,cytokinin dehydrogenase activity; GO:0071949,FAD binding; GO:0016491,oxidoreductase activity; GO:0009823,cytokinin catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016645,oxidoreductase activity, acting on the CH-NH group of donors; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0050660,flavin adenine dinucleotide binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009308,amine metabolic process; GO:0009690,cytokinin metabolic process; GO:0009987,cellular process; GO:0010817,regulation of hormone levels; GO:0034754,cellular hormone metabolic process; GO:0042445,hormone metabolic process; GO:0042447,hormone catabolic process; GO:0044237,cellular metabolic process; GO:0046483,heterocycle metabolic process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF09265.13:Cytokinin dehydrogenase 1, FAD and cytokinin binding","--","--","--"]
["MS01G03880",2.0207,2.2235,2.1294,0.1782,0.0746,0.1552,0,0,0,1.2849,1.3708,1.3526,0.6646,0.5831,0.582,31,34,32,2,1,2,0,0,0,16,18,21,8,7,7,-0.482872278,0.216981013,0.303857735,false,-1.507368297,0.002485037,0.005409029,"down",-3.777290342,"1.92686E-06","7.28243E-06","down",-6.839696524,"1.02463E-07","4.41014E-07","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",3475164,3476106,"+","MS01G03880","--","K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB114-like (A)","--","transcription factor MYB114-like [Malus domestica]","MYB3_CROXC RecName: Full=Transcription factor MYB3 {ECO:0000305}; AltName: Full=Myb-related protein 3 {ECO:0000303|PubMed:31004005}; Short=CcMYB3 {ECO:0000303|PubMed:31004005};","A0A498HV10_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73021.1};","Transcription factor, Myb superfamily","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","MYB","TF","MYB->MYB"]
["MS01G03900",2.0521,0.473,2.293,0.1137,0.6981,0.4292,0.2922,0.4297,0.399,0.5808,0.3888,0.3562,0.106,0.1418,0.4598,74,17,81,3,22,13,8,11,13,17,12,13,3,4,13,-1.667551056,0.006400054,0.014809176,"down",-2.476624679,0.000554718,0.001373289,"down",-1.714923564,0.019610276,0.034818293,"down",-1.815748457,0.003450586,0.007239927,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",3489931,3502925,"-","MS01G03900","--","K15639 PHYB activation tagged suppressor 1 [EC:1.14.-.-] | (RefSeq) cytochrome P450 734A1 (A)","ko00905: Brassinosteroid biosynthesis; ko01110: Biosynthesis of secondary metabolites","cytochrome P450 CYP72A219-like [Malus domestica]","C7A39_KALSE RecName: Full=Cytochrome P450 72A397; EC=1.14.14.- {ECO:0000269|PubMed:29186583};","A0A498HU55_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73017.1};","Cytochrome P450 CYP4/CYP19/CYP26 subfamilies","GO:0016021,integral component of membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0016712,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; GO:0016134,saponin metabolic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0004497,monooxygenase activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0016137,glycoside metabolic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901657,glycosyl compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G03910",1.4313,1.7894,1.5735,0.6923,0.4283,1.0223,0.203,0.5273,0.4874,0.3798,0.7717,0.6962,0.6454,0.3377,0.3932,65,81,70,23,17,39,7,17,20,14,30,32,23,12,14,-1.189040311,0.00061479,0.001835116,"down",-1.504255756,"7.43684E-05",0.000215778,"down",-0.961120531,0.010729524,0.020309456,false,-1.696309102,"3.69733E-05",0.000109985,"down",-0.488646229,0.369492421,0.523011845,false,-0.176340324,0.759250905,0.864999945,false,-0.731228826,0.183040411,0.642178419,false,0.246703706,0.614571078,0.7687518,false,0.565510347,0.269945406,0.560156566,false,"chr_001",3508537,3510595,"+","MS01G03910","--","--","--","trihelix transcription factor GT-2-like [Malus domestica]","TGT2_ARATH RecName: Full=Trihelix transcription factor GT-2; AltName: Full=Trihelix DNA-binding protein GT-2;","A0A498HNH9_MALDO RecName: Full=Myb-like domain-containing protein {ECO:0000259|PROSITE:PS50090};","Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13837.9:Myb/SANT-like DNA-binding domain","Trihelix","TF","Trihelix"]
["MS01G03920",3.3208,4.5617,6.9886,0.2095,0.5262,0.2433,0.3365,0.4318,0.5089,2.8323,3.1037,2.7764,2.6693,1.5669,2.5414,65,89,134,3,9,4,5,6,9,45,52,55,41,24,39,-0.579762139,0.081607706,0.134193385,false,-0.831638592,0.025717399,0.044200407,false,-3.674846845,"2.2889E-11","1.68007E-10","down",-3.246258221,"4.89983E-11","3.13551E-10","down",-2.653228643,"1.82033E-08","2.38177E-07","down",-2.398327193,"5.76394E-06","8.37299E-05","down","NA","NA","NA","NA",-3.076957484,"7.46179E-09","2.07461E-07","down",-2.815709472,"1.61592E-06","7.25931E-05","down","chr_001",3515089,3516989,"-","MS01G03920","--","K09422 transcription factor MYB, plant | (RefSeq) transcription repressor MYB5-like (A)","--","transcription repressor MYB5-like [Malus domestica]","MYB2_CROXC RecName: Full=Transcription factor MYB1 {ECO:0000305}; AltName: Full=Myb-related protein 1 {ECO:0000303|PubMed:31004005}; Short=CcMYB2 {ECO:0000303|PubMed:31004005};","A0A678SNA4_MALDO SubName: Full=MYB domain class transcription factor {ECO:0000313|EMBL:AUZ96358.1};","Transcription factor, Myb superfamily","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0009813,flavonoid biosynthetic process; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","MYB","TF","MYB->MYB"]
["MS01G03930",2.9778,1.0755,1.4997,0.1628,0.0909,0.1891,0,0.3356,0.2637,0.3913,0.1392,0.2354,0.1012,0.3044,0.2026,75,27,37,3,2,4,0,6,6,8,3,6,2,6,4,-2.675853385,"2.85845E-05",0.000113535,"down",-2.907729094,"1.44805E-05","4.72662E-05","down",-3.453125616,"1.95579E-06","7.37686E-06","down",-2.938928243,"9.71568E-05",0.000269227,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",3560792,3562091,"+","MS01G03930","--","K09422 transcription factor MYB, plant | (RefSeq) transcription repressor MYB6-like (A)","--","transcription factor MYB123-like [Malus sylvestris]","MY123_ACTCC RecName: Full=Transcription factor MYB123 {ECO:0000305}; AltName: Full=Myb-related protein 123 {ECO:0000305}; Short=AcMYB123 {ECO:0000303|PubMed:30912865};","A0A498HSQ4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73012.1};","Transcription factor, Myb superfamily","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0031542,positive regulation of anthocyanin biosynthetic process; GO:0045893,positive regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009718,anthocyanin-containing compound biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0009813,flavonoid biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009962,regulation of flavonoid biosynthetic process; GO:0009963,positive regulation of flavonoid biosynthetic process; GO:0019222,regulation of metabolic process; GO:0031537,regulation of anthocyanin metabolic process; GO:0031539,positive regulation of anthocyanin metabolic process; GO:0031540,regulation of anthocyanin biosynthetic process; GO:0042440,pigment metabolic process; GO:0044238,primary metabolic process; GO:0046148,pigment biosynthetic process; GO:0046283,anthocyanin-containing compound metabolic process; GO:0048518,positive regulation of biological process; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:1901576,organic substance biosynthetic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048522,positive regulation of cellular process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","MYB","TF","MYB->MYB"]
["MS01G03950",13.0357,16.2519,16.7595,1.1929,0.8738,1.2987,0.5747,0.0768,0.9659,2.8222,3.9507,6.6287,1.5987,2.0214,1.1131,239,297,301,16,14,20,8,1,16,42,62,123,23,29,16,-1.590044829,"2.20607E-07","1.27079E-06","down",-2.987838738,"1.69292E-26","4.01959E-25","down",-3.566547013,"8.62155E-33","3.52749E-31","down",-4.496428398,"9.43922E-28","2.08476E-26","down",-2.917423626,"2.61345E-06","2.23406E-05","down",-1.529312945,0.026476429,0.089877602,false,"NA","NA","NA","NA",-1.953491645,"1.18841E-05",0.0001438,"down",-0.553210327,0.237398651,0.524947412,false,"chr_001",3587897,3589644,"-","MS01G03950","--","K23052 NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [EC:7.1.1.-] | (RefSeq) NAD(P)H-quinone oxidoreductase subunit U, chloroplastic (A)","--","NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Malus domestica]","NDHU_ARATH RecName: Full=NAD(P)H-quinone oxidoreductase subunit U, chloroplastic {ECO:0000305}; EC=7.1.1.- {ECO:0000305}; AltName: Full=NAD(P)H dehydrogenase subunit U {ECO:0000303|PubMed:21785130}; Short=NDH subunit U {ECO:0000305}; AltName: Full=NADH-plastoquinone oxidoreductase subunit U {ECO:0000305}; AltName: Full=Protein CHLORORESPIRATORY REDUCTION L {ECO:0000303|PubMed:21505067}; Flags: Precursor;","A0A540MRM2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE01437.1};","--","GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0010598,NAD(P)H dehydrogenase complex (plastoquinone); GO:0009536,plastid; GO:0048038,quinone binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane; GO:0031224,intrinsic component of membrane; GO:0032991,protein-containing complex; GO:1902494,catalytic complex","PF00226.34:DnaJ domain","--","--","--"]
["MS01G03980",3.0854,3.4007,1.7301,5.0494,3.829,5.2252,5.3806,3.7952,5.1468,6.7458,7.4124,6.6125,3.1566,4.0541,3.6028,71,78,39,85,77,101,94,62,107,126,146,154,57,73,65,1.518225343,"2.60851E-07","1.48725E-06","up",0.68131152,0.038762717,0.063635747,false,0.98263913,0.003438818,0.007255694,false,1.077712292,0.001333305,0.003031165,"up",-0.424731899,0.065161354,0.141500911,false,0.413242112,0.120648481,0.26942426,false,0.095958833,0.711942452,0.926106187,false,-0.518971999,0.021137408,0.071852666,false,0.325122907,0.207210975,0.486985066,false,"chr_001",3603447,3606309,"+","MS01G03980","--","K18787 thermospermine synthase [EC:2.5.1.79] | (RefSeq) thermospermine synthase ACAULIS5-like (A)","--","thermospermine synthase ACAULIS5-like [Malus domestica]","ACL5_ARATH RecName: Full=Thermospermine synthase ACAULIS5; EC=2.5.1.79;","A0A498HQ85_MALDO RecName: Full=PABS domain-containing protein {ECO:0000259|PROSITE:PS51006};","Spermidine synthase","GO:0005737,cytoplasm; GO:0016768,spermine synthase activity; GO:0010487,thermospermine synthase activity; GO:0009926,auxin polar transport; GO:0010087,phloem or xylem histogenesis; GO:0006596,polyamine biosynthetic process; GO:0048759,xylem vessel member cell differentiation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016765,transferase activity, transferring alkyl or aryl (other than methyl) groups; GO:0006810,transport; GO:0008150,biological_process; GO:0009914,hormone transport; GO:0010817,regulation of hormone levels; GO:0051179,localization; GO:0051234,establishment of localization; GO:0060918,auxin transport; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0009888,tissue development; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0006576,cellular biogenic amine metabolic process; GO:0006595,polyamine metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009308,amine metabolic process; GO:0009309,amine biosynthetic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042401,cellular biogenic amine biosynthetic process; GO:0044106,cellular amine metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0010089,xylem development; GO:0030154,cell differentiation; GO:0048869,cellular developmental process; GO:1905177,tracheary element differentiation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF01564.20:Spermine/spermidine synthase domain","--","--","--"]
["MS01G03990",0.3448,1.6145,0.352,2.0427,1.3154,1.6422,1.8169,1.1334,1.7813,1.6994,3.2231,4.0888,0.8789,1.7628,1.0263,3,14,3,13,10,12,12,7,14,12,24,36,6,12,7,2.138687808,0.003387954,0.008413632,"up","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-0.816004175,0.14035998,0.256119921,false,"NA","NA","NA","NA","NA","NA","NA","NA",-0.812438168,0.139022703,0.290221905,false,"NA","NA","NA","NA","chr_001",3606697,3607068,"+","MS01G03990","--","--","--","hypothetical protein DVH24_012692 [Malus domestica]","--","A0A498HNA9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73008.1};","--","--","--","--","--","--"]
["MS01G04140",17.613,18.285,14.8219,7.1602,8.0619,9.8459,5.8503,4.099,4.7467,19.0951,23.8337,23.9404,15.4581,15.658,11.6428,575,595,474,171,230,270,145,95,140,506,666,791,396,400,298,0.580579163,0.000334903,0.001064277,false,0.045509404,0.811598473,0.854317143,false,-0.80654053,"3.19083E-05","9.85506E-05",false,-1.505635737,"1.66869E-12","1.24451E-11","down",-2.073464444,"1.79771E-25","1.65798E-23","down",-1.536109709,"1.56135E-11","8.19873E-10","down",-0.701493,0.002457582,0.09491637,false,-1.369437896,"4.27104E-14","3.11676E-12","down",-0.826280416,"9.63352E-05",0.002131062,false,"chr_001",3736020,3738480,"+","MS01G04140","--","K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] | (RefSeq) uncharacterized protein LOC103403572 (A)","--","(S)-coclaurine N-methyltransferase [Malus domestica]","CNMT_THLFG RecName: Full=(S)-coclaurine N-methyltransferase; Short=TfCNMT; EC=2.1.1.140;","A0A498HQ64_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72989.1};","--","GO:0005737,cytoplasm; GO:0030794,(S)-coclaurine-N-methyltransferase activity; GO:0032259,methylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008168,methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0016740,transferase activity; GO:0016741,transferase activity, transferring one-carbon groups; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF02353.23:Mycolic acid cyclopropane synthetase","--","--","--"]
["MS01G04160",14.6869,14.5037,16.0843,8.9029,5.8719,7.2249,6.109,5.7686,8.6652,6.0989,6.4753,6.3377,5.7847,6.999,5.622,893,879,958,396,312,369,282,249,476,301,337,390,276,333,268,-1.072322988,"3.65191E-18","7.37647E-17","down",-1.005747276,"8.07035E-12","5.87707E-11","down",-0.829387947,"1.23877E-05","4.09933E-05",false,-0.860320369,"1.62582E-06","5.95153E-06",false,0.225367451,0.247213503,0.391282485,false,0.161402199,0.441026571,0.631344903,false,-0.031945223,0.892086127,0.974952946,false,0.259269765,0.192704399,0.363215714,false,0.200831427,0.34081458,0.630157997,false,"chr_001",3746667,3750071,"-","MS01G04160","--","K14497 protein phosphatase 2C [EC:3.1.3.16] | (RefSeq) protein phosphatase 2C 53-like isoform X1 (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction","protein phosphatase 2C 53-like isoform X1 [Malus domestica]","P2C16_ARATH RecName: Full=Protein phosphatase 2C 16; Short=AtPP2C16; EC=3.1.3.16; AltName: Full=AtP2C-HA; AltName: Full=Protein HYPERSENSITIVE TO ABA 1; AltName: Full=Protein phosphatase 2C HAB1; Short=PP2C HAB1; Flags: Precursor;","A0A498HU25_MALDO RecName: Full=Protein-serine/threonine phosphatase {ECO:0000256|ARBA:ARBA00013081}; EC=3.1.3.16 {ECO:0000256|ARBA:ARBA00013081};","Serine/threonine protein phosphatase","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0046872,metal ion binding; GO:0017018,myosin phosphatase activity; GO:0004722,protein serine/threonine phosphatase activity; GO:0009738,abscisic acid-activated signaling pathway; GO:0035970,peptidyl-threonine dephosphorylation; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0004721,phosphoprotein phosphatase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006470,protein dephosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016311,dephosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00481.24:Protein phosphatase 2C","--","--","--"]
["MS01G04180",6.724,6.5828,6.1798,2.6658,1.9294,2.9504,3.3982,2.6612,4.2272,1.852,2.6581,2.1075,2.5629,1.2201,2.306,331,323,298,96,83,122,127,93,188,74,112,105,99,47,89,-1.376822441,"1.12739E-12","1.31163E-11","down",-1.383414446,"5.5361E-07","2.23632E-06","down",-1.163246831,"3.62126E-08","1.75472E-07","down",-0.640707093,0.002213964,0.004830615,false,0.748021226,0.003759203,0.01352894,false,0.756915611,0.021040563,0.075217091,false,0.520904159,0.048337198,0.395312725,false,0.22962748,0.384445709,0.574827768,false,0.245020538,0.469008089,0.736173374,false,"chr_001",3762602,3767310,"-","MS01G04180","--","K08790 serine/threonine kinase 38 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase tricorner isoform X1 (A)","--","serine/threonine-protein kinase tricorner isoform X1 [Malus domestica]","IRE4_ARATH RecName: Full=Probable serine/threonine protein kinase IRE4 {ECO:0000305}; Short=AtIRE4 {ECO:0000303|PubMed:17237187}; EC=2.7.11.1 {ECO:0000305};","A0A498J6Q5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH91449.1};","NDR and related serine/threonine kinases","GO:0005524,ATP binding; GO:0046872,metal ion binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0035556,intracellular signal transduction; GO:0018105,peptidyl-serine phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0018193,peptidyl-amino acid modification; GO:0018209,peptidyl-serine modification; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G04190",4.1679,4.2982,3.4703,1.1936,1.5054,1.7879,1.1808,1.7547,1.6366,1.6494,1.3873,1.5644,1.2908,1.4283,1.7077,358,368,292,75,113,129,77,107,127,115,102,136,87,96,115,-1.188362737,"3.79131E-09","2.86686E-08","down",-1.142428479,"2.29528E-08","1.12059E-07","down",-1.19912676,"1.04706E-07","4.74627E-07","down",-1.105757133,"1.25487E-06","4.66479E-06","down",0.09681699,0.701419669,0.805682456,false,0.05332237,0.834531994,0.909345879,false,0.093802266,0.732533094,0.93284171,false,0.006670387,0.978737346,0.989563475,false,-0.031405087,0.90112491,0.964994077,false,"chr_001",3769281,3774146,"+","MS01G04190","--","K11094 U2 small nuclear ribonucleoprotein B'' | (RefSeq) U2 small nuclear ribonucleoprotein B''-like (A)","ko03040: Spliceosome","protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like [Malus sylvestris]","ALP1_ARATH RecName: Full=Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 {ECO:0000303|PubMed:26642436}; EC=3.1.-.-;","A0A5N5HQN1_9ROSA RecName: Full=DDE Tnp4 domain-containing protein {ECO:0000259|Pfam:PF13359};","Predicted transposase","GO:0035098,ESC/E(Z) complex; GO:0005634,nucleus; GO:0035102,PRC1 complex; GO:0003682,chromatin binding; GO:0046872,metal ion binding; GO:0004518,nuclease activity; GO:0040029,epigenetic regulation of gene expression; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0006325,chromatin organization; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0016043,cellular component organization; GO:0019222,regulation of metabolic process; GO:0043170,macromolecule metabolic process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005654,nucleoplasm; GO:0031519,PcG protein complex; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0034708,methyltransferase complex; GO:0035097,histone methyltransferase complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex; GO:0000151,ubiquitin ligase complex; GO:0000152,nuclear ubiquitin ligase complex; GO:0140535,intracellular protein-containing complex","PF13359.9:DDE superfamily endonuclease","--","--","--"]
["MS01G04280",27.6753,32.1401,32.9549,152.4795,115.9723,127.6864,131.964,99.9605,114.8637,101.1602,90.9183,110.4579,108.8526,149.379,121.7315,787,911,918,3172,2882,3050,2849,2018,2951,2335,2213,3179,2429,3324,2714,1.895690833,"7.26867E-38","5.7741E-36","up",2.325836414,"4.39353E-50","3.28536E-48","up",2.309675339,"8.18354E-45","6.01864E-43","up",2.187591941,"3.96291E-41","1.72112E-39","up",0.304840191,0.071398442,0.152263073,false,-0.124055123,0.490740021,0.674862029,false,-0.1244468,0.491268965,0.851459802,false,0.431945912,0.011133899,0.043757164,false,0.008424383,0.963077708,0.988738226,false,"chr_001",3836987,3838202,"+","MS01G04280","--","--","--","uncharacterized protein LOC103455808 [Malus domestica]","--","A0A498HN79_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72978.1};","--","--","PF12023.11:Domain of unknown function (DUF3511)","--","--","--"]
["MS01G04350",7.8153,7.0638,3.6417,0.8662,1.316,0.8941,0.9583,1.8183,1.3508,2.342,1.5629,1.7392,1.2861,2.3394,1.9757,333,300,152,27,49,32,31,55,52,81,57,75,43,78,66,-1.528362316,"1.23894E-05","5.25203E-05","down",-1.444769333,"3.22316E-05","9.9397E-05","down",-2.371631414,"5.5957E-10","3.48762E-09","down",-1.892489457,"4.24353E-07","1.68799E-06","down",-0.348636628,0.335424288,0.487990735,false,-0.432541388,0.237423846,0.427137568,false,0.477443002,0.236632067,0.692931721,false,-0.822721942,0.025316883,0.082596293,false,-0.900559424,0.015576701,0.097792749,false,"chr_001",3868810,3873151,"+","MS01G04350","--","--","--","IQ domain-containing protein IQM4-like [Malus domestica]","IQM4_ARATH RecName: Full=IQ domain-containing protein IQM4 {ECO:0000305}; AltName: Full=IQ motif-containing protein 4 {ECO:0000303|Ref.5};","A0A498HSL7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72972.1};","--","GO:0009507,chloroplast; GO:0005634,nucleus; GO:0005516,calmodulin binding; GO:0071456,cellular response to hypoxia; GO:0009737,response to abscisic acid; GO:0009651,response to salt stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0006970,response to osmotic stress; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00612.30:IQ calmodulin-binding motif","--","--","--"]
["MS01G04360",4.7876,4.1121,5.0632,2.6837,3.1334,5.5766,2.6994,2.0135,1.525,5.771,4.8087,4.7816,3.687,7.0867,5.3817,278,238,288,114,159,272,119,83,80,272,239,281,168,322,245,0.328277104,0.08111088,0.13355478,false,0.499318705,0.042076654,0.068331764,false,-0.089283316,0.755619217,0.804420244,false,-0.874779815,0.001084419,0.0025038,false,-1.192646195,"1.78857E-05",0.000125015,"down",-1.360611184,"1.70737E-05",0.000216238,"down",-0.786366293,0.025110304,0.305855283,false,-0.402178495,0.174006936,0.33899766,false,-0.564797475,0.088749616,0.302664106,false,"chr_001",3877339,3881545,"+","MS01G04360","--","--","--","IQ domain-containing protein IQM1-like isoform X1 [Malus domestica]","IQM1_ARATH RecName: Full=IQ domain-containing protein IQM1 {ECO:0000305}; AltName: Full=IQ motif-containing protein 1 {ECO:0000303|Ref.6};","A0A498HSL7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72972.1};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0005516,calmodulin binding; GO:0010119,regulation of stomatal movement; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0010118,stomatal movement; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","--","--","--","--"]
["MS01G04370",2.2806,1.4936,1.6168,0.0433,0.4712,0.264,0.751,0.7585,0.4558,0.3122,0.6661,0.6885,0.4037,0.4857,0.0808,72,47,50,1,13,7,18,17,13,8,18,22,10,12,2,-1.505154357,0.000426417,0.001323501,"down",-2.181988293,"5.27517E-05",0.000156974,"down",-2.540385517,"3.09534E-05","9.57402E-05","down",-1.182471215,0.005280141,0.010677284,"down",0.344444261,0.531216029,0.670847139,false,1.020795602,0.139916667,0.298541401,false,1.366419553,0.073469737,0.471931392,false,"NA","NA","NA","NA","NA","NA","NA","NA","chr_001",3885432,3887437,"+","MS01G04370","--","--","--","protein IQ-DOMAIN 1 [Malus domestica]","IQD6_ARATH RecName: Full=Protein IQ-DOMAIN 6 {ECO:0000303|PubMed:16368012}; Short=AtIQD6 {ECO:0000303|PubMed:16368012};","A0A540LG90_MALBA RecName: Full=DUF4005 domain-containing protein {ECO:0000259|Pfam:PF13178};","--","GO:0016604,nuclear body; GO:0005634,nucleus; GO:0009524,phragmoplast; GO:0005886,plasma membrane; GO:0009574,preprophase band; GO:0005516,calmodulin binding; GO:0007105,cytokinesis, site selection; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0000910,cytokinesis; GO:0007049,cell cycle; GO:0008150,biological_process; GO:0009987,cellular process; GO:0022402,cell cycle process; GO:0032506,cytokinetic process; GO:0051301,cell division; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005654,nucleoplasm; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0005737,cytoplasm; GO:0016020,membrane; GO:0071944,cell periphery; GO:0005856,cytoskeleton; GO:0015630,microtubule cytoskeleton; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle","PF00612.30:IQ calmodulin-binding motif","--","--","--"]
["MS01G04400",10.7123,14.769,7.0444,6.2886,7.5454,7.0415,8.7141,5.9555,8.0017,3.9403,4.1973,4.6321,3.6013,3.6674,4.8059,489,672,315,210,301,270,302,193,330,146,164,214,129,131,172,-1.167522287,"4.36199E-05",0.000166884,"down",-1.144333336,"7.40277E-05",0.000214853,"down",-0.428254643,0.148771495,0.207070456,false,-0.245160228,0.411823773,0.49400255,false,0.936606222,"7.66619E-06","5.84481E-05",false,0.915888179,"5.18817E-05",0.000557346,false,0.180394239,0.407150075,0.808624384,false,0.757705172,"7.66561E-05",0.000727042,false,0.742409647,0.000503331,0.007901445,false,"chr_001",3907585,3909956,"-","MS01G04400","--","K09419 heat shock transcription factor, other eukaryote | (RefSeq) heat shock factor protein HSF30 (A)","--","hypothetical protein DVH24_012653 [Malus domestica]","HSF30_SOLPE RecName: Full=Heat shock factor protein HSF30; AltName: Full=Heat shock transcription factor 30; Short=HSTF 30; AltName: Full=Heat stress transcription factor;","A0A498HQ44_MALDO RecName: Full=HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434};","Heat shock transcription factor","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0043565,sequence-specific DNA binding; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00447.20:HSF-type DNA-binding","HSF","TF","HSF"]
["MS01G04430",4.5718,4.3623,3.0438,8.3214,7.6199,4.7032,7.7892,9.3448,9.0482,4.1631,2.9609,3.5598,5.0346,3.8421,4.0565,184,175,120,245,268,159,238,267,329,136,102,145,159,121,128,0.023454472,0.930532479,0.950178483,false,0.401415835,0.10873744,0.157826917,false,1.00568889,0.001268092,0.00291761,"up",1.406388384,"7.37806E-10","4.1674E-09","up",1.398659788,"2.22439E-10","4.02202E-09","up",1.02126292,"6.27062E-07","1.20254E-05","up",0.399280384,0.15208994,0.606163777,false,1.00129807,0.001270134,0.0076066,"up",0.630308227,0.03224226,0.160245822,false,"chr_001",3924756,3928736,"-","MS01G04430","--","K05863 solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31 | (RefSeq) probable ADP,ATP carrier protein At5g56450 (A)","--","probable ADP,ATP carrier protein At5g56450 [Malus domestica]","ADT5_ARATH RecName: Full=Probable ADP,ATP carrier protein At5g56450; AltName: Full=ADP/ATP translocase At5g56450; AltName: Full=Adenine nucleotide translocator At5g56450;","A0A498HU07_MALDO RecName: Full=ADP/ATP translocase {ECO:0000256|RuleBase:RU368008}; AltName: Full=ADP,ATP carrier protein {ECO:0000256|RuleBase:RU368008};","Mitochondrial ADP/ATP carrier proteins","GO:0016021,integral component of membrane; GO:0005743,mitochondrial inner membrane; GO:0005347,ATP transmembrane transporter activity; GO:0005471,ATP:ADP antiporter activity; GO:0048653,anther development; GO:0140021,mitochondrial ADP transmembrane transport; GO:1990544,mitochondrial ATP transmembrane transport; GO:1901029,negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway; GO:0000295,adenine nucleotide transmembrane transporter activity; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005346,purine ribonucleotide transmembrane transporter activity; GO:0008509,anion transmembrane transporter activity; GO:0008514,organic anion transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015215,nucleotide transmembrane transporter activity; GO:0015216,purine nucleotide transmembrane transporter activity; GO:0015605,organophosphate ester transmembrane transporter activity; GO:0015932,nucleobase-containing compound transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:1901505,carbohydrate derivative transmembrane transporter activity; GO:0015217,ADP transmembrane transporter activity; GO:0015291,secondary active transmembrane transporter activity; GO:0015297,antiporter activity; GO:0022804,active transmembrane transporter activity; GO:0022853,active ion transmembrane transporter activity; GO:0140323,solute:anion antiporter activity; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048437,floral organ development; GO:0048438,floral whorl development; GO:0048443,stamen development; GO:0048466,androecium development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0099402,plant organ development; GO:0006810,transport; GO:0006811,ion transport; GO:0006820,anion transport; GO:0006862,nucleotide transport; GO:0009987,cellular process; GO:0015711,organic anion transport; GO:0015748,organophosphate ester transport; GO:0015865,purine nucleotide transport; GO:0015866,ADP transport; GO:0015868,purine ribonucleotide transport; GO:0015931,nucleobase-containing compound transport; GO:0034220,ion transmembrane transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051503,adenine nucleotide transport; GO:0055085,transmembrane transport; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0072530,purine-containing compound transmembrane transport; GO:0098656,anion transmembrane transport; GO:1901264,carbohydrate derivative transport; GO:1901679,nucleotide transmembrane transport; GO:1990542,mitochondrial transmembrane transport; GO:0015867,ATP transport; GO:0006839,mitochondrial transport; GO:0006915,apoptotic process; GO:0006996,organelle organization; GO:0007005,mitochondrion organization; GO:0007006,mitochondrial membrane organization; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008219,cell death; GO:0008637,apoptotic mitochondrial changes; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0010639,negative regulation of organelle organization; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0010821,regulation of mitochondrion organization; GO:0010823,negative regulation of mitochondrion organization; GO:0010941,regulation of cell death; GO:0012501,programmed cell death; GO:0016043,cellular component organization; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0023057,negative regulation of signaling; GO:0032879,regulation of localization; GO:0033043,regulation of organelle organization; GO:0035794,positive regulation of mitochondrial membrane permeability; GO:0035795,negative regulation of mitochondrial membrane permeability; GO:0042981,regulation of apoptotic process; GO:0043066,negative regulation of apoptotic process; GO:0043067,regulation of programmed cell death; GO:0043069,negative regulation of programmed cell death; GO:0046902,regulation of mitochondrial membrane permeability; GO:0046907,intracellular transport; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051049,regulation of transport; GO:0051128,regulation of cellular component organization; GO:0051129,negative regulation of cellular component organization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0051716,cellular response to stimulus; GO:0060548,negative regulation of cell death; GO:0061024,membrane organization; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0071840,cellular component organization or biogenesis; GO:0090559,regulation of membrane permeability; GO:0097190,apoptotic signaling pathway; GO:0097345,mitochondrial outer membrane permeabilization; GO:1901028,regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway; GO:1902108,regulation of mitochondrial membrane permeability involved in apoptotic process; GO:1902110,positive regulation of mitochondrial membrane permeability involved in apoptotic process; GO:1902686,mitochondrial outer membrane permeabilization involved in programmed cell death; GO:1905709,negative regulation of membrane permeability; GO:1905710,positive regulation of membrane permeability; GO:2001233,regulation of apoptotic signaling pathway; GO:2001234,negative regulation of apoptotic signaling pathway; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005740,mitochondrial envelope; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031966,mitochondrial membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00153.30:Mitochondrial carrier protein","--","--","--"]
["MS01G04500",10.3646,9.5269,8.263,0.7556,1.2877,1.7627,0.9361,0.4727,0.9615,3.2835,3.2752,2.6334,0.9812,3.5069,2.7447,525,481,410,28,57,75,36,17,44,135,142,135,39,139,109,-1.43246472,"3.29785E-13","4.05554E-12","down",-1.679609957,"3.5795E-06","1.28638E-05","down",-2.674018909,"6.29675E-20","1.05132E-18","down",-3.281885062,"5.06E-33","1.5114E-31","down",-1.840954963,"1.09658E-08","1.50046E-07","down",-1.595983604,0.000890121,0.006007882,"down",-0.613723477,0.163508524,0.618421487,false,-1.228768199,0.000244517,0.001931307,"down",-0.975110662,0.043796239,0.194635906,false,"chr_001",3963965,3966130,"-","MS01G04500","--","K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) systemin receptor SR160 (A)","ko04075: Plant hormone signal transduction","hypothetical protein C1H46_028951 [Malus baccata]","Y1680_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At1g68400; EC=2.7.11.1; Flags: Precursor;","A0A540LG88_MALBA RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G04520",4.0019,3.248,3.9017,1.4752,0.7718,0.6959,0.6515,0.38,1.3438,0.9971,3.2044,1.2884,0.9741,1.0343,1.0323,89,72,85,24,15,13,11,6,27,18,61,29,17,18,18,-0.854826574,0.047565608,0.084583661,false,-1.5823707,"2.18189E-06","8.09425E-06","down",-1.720213483,"1.26034E-05","4.16699E-05","down",-1.932032956,"1.00886E-05","3.28664E-05","down",-1.082981761,0.089970758,0.182033964,false,"NA","NA","NA","NA",-0.235116331,0.710023846,0.925053518,false,-0.844564792,0.154782535,0.312751851,false,"NA","NA","NA","NA","chr_001",3974876,3976495,"-","MS01G04520","--","--","--","uncharacterized protein LOC103455822 [Malus domestica]","--","A0A5N5GVD5_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2619566.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF05875.15:Ceramidase","--","--","--"]
["MS01G04530",22.2705,19.3588,15.8831,6.0469,2.4437,6.4164,3.0808,4.1899,8.1605,2.8189,7.3066,3.8935,3.0454,3.0865,2.3671,876,759,612,174,84,212,92,117,290,90,246,155,94,95,73,-1.869145082,"3.87561E-09","2.92686E-08","down",-2.468501017,"1.25004E-29","3.58819E-28","down",-1.752832176,"2.33157E-07","1.00884E-06","down",-1.632245043,"5.45106E-07","2.13521E-06","down",0.248818568,0.563035981,0.697775912,false,0.855614177,0.017121567,0.064175149,false,0.125540844,0.772889427,0.944859637,false,0.127577794,0.768780485,0.87242556,false,0.737795946,0.041007062,0.186670017,false,"chr_001",3981589,3983270,"-","MS01G04530","--","--","--","pathogen-associated molecular patterns-induced protein A70-like [Malus domestica]","A70_ARATH RecName: Full=Pathogen-associated molecular patterns-induced protein A70 {ECO:0000303|PubMed:17215350}; Short=PIG A70 {ECO:0000303|PubMed:17215350};","A0A540LG86_MALBA RecName: Full=DUF4408 domain-containing protein {ECO:0000259|Pfam:PF14364};","--","GO:0016021,integral component of membrane; GO:0042742,defense response to bacterium; GO:0009617,response to bacterium; GO:0009753,response to jasmonic acid; GO:0009611,response to wounding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0070542,response to fatty acid; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF05553.14:Cotton fibre expressed protein","--","--","--"]
["MS01G04560",0.9108,0.4112,0.186,0.3113,0.2606,0.0542,0.2999,0.1283,0.1512,1.3465,1.2769,1.2599,1.5669,1.6295,1.2198,20,9,4,5,5,1,5,2,3,24,24,28,27,28,21,1.54211508,0.010296454,0.022517158,"up",1.832502816,0.001746373,0.003910736,"up","NA","NA","NA","NA","NA","NA","NA","NA",-2.641977494,"6.91281E-05",0.000416028,"down",-2.931713595,"7.82541E-06",0.000109481,"down","NA","NA","NA","NA",-2.593639911,0.000155991,0.001324899,"down",-2.878708858,"1.42805E-05",0.000451856,"down","chr_001",4047687,4049302,"+","MS01G04560","--","--","--","hypothetical protein DVH24_012642 [Malus domestica]","--","A0A498HN60_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72958.1};","--","GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0016758,hexosyltransferase activity; GO:0006486,protein glycosylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009100,glycoprotein metabolic process; GO:0009101,glycoprotein biosynthetic process; GO:0009987,cellular process; GO:0019538,protein metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043413,macromolecule glycosylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0070085,glycosylation; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","--","--","--","--"]
["MS01G04570",4.8314,4.9918,6.9933,4.9286,5.5698,8.3701,4.0367,2.9457,3.1927,6.6629,7.0345,8.2294,6.7083,11.1044,9.9793,134,138,190,100,135,195,85,58,80,150,167,231,146,241,217,0.573978256,0.008667613,0.019345667,false,1.017304819,"4.23508E-05",0.000128023,"up",0.377710111,0.166604842,0.228307501,false,-0.436570039,0.097733457,0.144900345,false,-0.998953267,"2.14777E-05",0.000147651,false,-1.440053483,"9.08248E-08","2.14271E-06","down",-0.81722453,0.004336301,0.130401142,false,-0.178047453,0.476489109,0.660840792,false,-0.614826766,0.028363812,0.147171123,false,"chr_001",4057255,4059101,"+","MS01G04570","--","--","--","putative GATA transcription factor 22 [Malus domestica]","GAT22_ARATH RecName: Full=Putative GATA transcription factor 22 {ECO:0000303|PubMed:17208962}; AltName: Full=Protein CYTOKININ-RESPONSIVE GATA FACTOR 1 {ECO:0000303|PubMed:17587690}; AltName: Full=Protein GNC-LIKE {ECO:0000303|PubMed:18417639}; Short=AtGNL {ECO:0000303|PubMed:25077795};","A0A540KTD3_MALBA RecName: Full=GATA-type domain-containing protein {ECO:0000259|PROSITE:PS50114};","GATA-4/5/6 transcription factors","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0008270,zinc ion binding; GO:0010151,chloroplast elongation; GO:0009658,chloroplast organization; GO:0007623,circadian rhythm; GO:0009736,cytokinin-activated signaling pathway; GO:0009740,gibberellic acid mediated signaling pathway; GO:0009910,negative regulation of flower development; GO:0009938,negative regulation of gibberellic acid mediated signaling pathway; GO:0010187,negative regulation of seed germination; GO:0090693,plant organ senescence; GO:1902326,positive regulation of chlorophyll biosynthetic process; GO:0043610,regulation of carbohydrate utilization; GO:0010380,regulation of chlorophyll biosynthetic process; GO:0010468,regulation of gene expression; GO:2000028,regulation of photoperiodism, flowering; GO:0080050,regulation of seed development; GO:0010029,regulation of seed germination; GO:0009733,response to auxin; GO:0009735,response to cytokinin; GO:0009739,response to gibberellin; GO:0009416,response to light stimulus; GO:0010167,response to nitrate; GO:0010114,response to red light; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0048511,rhythmic process; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071368,cellular response to cytokinin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0010476,gibberellin mediated signaling pathway; GO:0033993,response to lipid; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0009909,regulation of flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048519,negative regulation of biological process; GO:0048580,regulation of post-embryonic development; GO:0048581,negative regulation of post-embryonic development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048831,regulation of shoot system development; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0051093,negative regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0051241,negative regulation of multicellular organismal process; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:2000242,negative regulation of reproductive process; GO:0009937,regulation of gibberellic acid mediated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023057,negative regulation of signaling; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0009845,seed germination; GO:0090351,seedling development; GO:1900140,regulation of seedling development; GO:0099402,plant organ development; GO:0006725,cellular aromatic compound metabolic process; GO:0006778,porphyrin-containing compound metabolic process; GO:0006779,porphyrin-containing compound biosynthetic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0015994,chlorophyll metabolic process; GO:0015995,chlorophyll biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0033013,tetrapyrrole metabolic process; GO:0033014,tetrapyrrole biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042440,pigment metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046148,pigment biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0071704,organic substance metabolic process; GO:0090056,regulation of chlorophyll metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901401,regulation of tetrapyrrole metabolic process; GO:1901403,positive regulation of tetrapyrrole metabolic process; GO:1901463,regulation of tetrapyrrole biosynthetic process; GO:1901465,positive regulation of tetrapyrrole biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0009605,response to external stimulus; GO:0009758,carbohydrate utilization; GO:0009991,response to extracellular stimulus; GO:0031667,response to nutrient levels; GO:0032101,regulation of response to external stimulus; GO:0032104,regulation of response to extracellular stimulus; GO:0032107,regulation of response to nutrient levels; GO:0010467,gene expression; GO:0043170,macromolecule metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0009314,response to radiation; GO:0009628,response to abiotic stimulus; GO:0009648,photoperiodism; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0048573,photoperiodism, flowering; GO:0010154,fruit development; GO:0048316,seed development; GO:0010035,response to inorganic substance; GO:1901698,response to nitrogen compound; GO:0009639,response to red or far red light; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00320.30:GATA zinc finger","C2C2-GATA","TF","C2C2->C2C2-GATA"]
["MS01G04580",72.7307,83.5477,65.1733,14.7231,28.7375,23.8364,17.4411,24.8589,15.4969,53.6168,65.7399,64.085,47.6375,57.6535,47.161,6800,7786,5969,1007,2348,1872,1238,1650,1309,4069,5261,6064,3495,4218,3457,-0.090035315,0.544741131,0.639150526,false,-0.248868881,0.11264065,0.162883916,false,-1.50127488,"2.18223E-08","1.0928E-07","down",-1.649550176,"9.23386E-13","7.04377E-12","down",-1.547538331,"3.4686E-12","8.08277E-11","down",-1.387034551,"4.17385E-10","1.62223E-08","down",-0.153309249,0.622816169,0.89987916,false,-1.392203079,"1.18098E-07","2.47596E-06","down",-1.224290268,"3.67808E-06",0.000146689,"down","chr_001",4061832,4067430,"+","MS01G04580","--","K00281 glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] | (RefSeq) glycine dehydrogenase (decarboxylating), mitochondrial (A)","ko00260: Glycine, serine and threonine metabolism; ko00630: Glyoxylate and dicarboxylate metabolism; ko00785: Lipoic acid metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01200: Carbon metabolism","glycine dehydrogenase (decarboxylating), mitochondrial [Malus domestica]","GCSP_SOLTU RecName: Full=Glycine dehydrogenase (decarboxylating), mitochondrial; EC=1.4.4.2; AltName: Full=Glycine cleavage system P protein; AltName: Full=Glycine decarboxylase; AltName: Full=Glycine dehydrogenase (aminomethyl-transferring); Flags: Precursor;","A0A498HTZ6_MALDO RecName: Full=Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|ARBA:ARBA00012134}; EC=1.4.4.2 {ECO:0000256|ARBA:ARBA00012134};","Glycine dehydrogenase (decarboxylating)","GO:0005960,glycine cleavage complex; GO:0005739,mitochondrion; GO:0016594,glycine binding; GO:0004375,glycine dehydrogenase (decarboxylating) activity; GO:0030170,pyridoxal phosphate binding; GO:0019464,glycine decarboxylation via glycine cleavage system; GO:1901566,organonitrogen compound biosynthetic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0016597,amino acid binding; GO:0031406,carboxylic acid binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0043169,cation binding; GO:0043177,organic acid binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016638,oxidoreductase activity, acting on the CH-NH2 group of donors; GO:0016642,oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor; GO:0019842,vitamin binding; GO:0070279,vitamin B6 binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006544,glycine metabolic process; GO:0006546,glycine catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009063,cellular amino acid catabolic process; GO:0009069,serine family amino acid metabolic process; GO:0009071,serine family amino acid catabolic process; GO:0009987,cellular process; GO:0016054,organic acid catabolic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044281,small molecule metabolic process; GO:0044282,small molecule catabolic process; GO:0046395,carboxylic acid catabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901605,alpha-amino acid metabolic process; GO:1901606,alpha-amino acid catabolic process; GO:0009058,biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0032991,protein-containing complex; GO:0110165,cellular anatomical entity; GO:1902494,catalytic complex; GO:1990204,oxidoreductase complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF02347.19:Glycine cleavage system P-protein","--","--","--"]
["MS01G04630",4.1022,5.5471,5.0071,1.7067,1.0205,1.1678,2.0556,2.0099,2.4184,2.2523,3.2819,3.1722,1.1933,2.1084,1.4218,92,124,110,28,20,22,35,32,49,41,63,72,21,37,25,-0.565164091,0.032437108,0.060867982,false,-1.342643931,"2.35511E-05","7.43115E-05","down",-1.707903565,"3.23989E-07","1.36846E-06","down",-0.892042613,0.001449773,0.003278659,false,-0.313368727,0.313435079,0.464519062,false,0.465418322,0.213159608,0.397732172,false,0.812859566,0.033072781,0.344026909,false,-1.122631844,0.002742226,0.014249236,"down",-0.337035594,0.440870624,0.715962735,false,"chr_001",4096647,4098397,"+","MS01G04630","--","K20726 transmembrane protein 222 | (RefSeq) protein REVERSION-TO-ETHYLENE SENSITIVITY1 (A)","ko04016: MAPK signaling pathway - plant","protein REVERSION-TO-ETHYLENE SENSITIVITY1 [Malus domestica]","RTE1_ARATH RecName: Full=Protein REVERSION-TO-ETHYLENE SENSITIVITY1;","A0A498HUV4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72951.1};","Uncharacterized conserved protein","GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0010105,negative regulation of ethylene-activated signaling pathway; GO:0010104,regulation of ethylene-activated signaling pathway; GO:0009723,response to ethylene; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009873,ethylene-activated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0023057,negative regulation of signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070297,regulation of phosphorelay signal transduction system; GO:0070298,negative regulation of phosphorelay signal transduction system; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:1902531,regulation of intracellular signal transduction; GO:1902532,negative regulation of intracellular signal transduction; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane","PF05608.15:Protein of unknown function (DUF778)","--","--","--"]
["MS01G04640",4.6629,4.7506,4.3911,2.3223,1.1582,2.7541,1.3807,1.8839,2.5606,1.8703,4.1385,2.9644,1.5201,1.9863,1.7981,129,131,119,47,28,64,29,37,64,42,98,83,33,43,39,-0.445248101,0.130723431,0.199724649,false,-1.089577863,"2.092E-05","6.65712E-05","down",-0.949027564,0.004125646,0.008557755,false,-0.961482362,0.000821491,0.001939324,false,-0.506156176,0.191464771,0.323666616,false,0.143333954,0.686264904,0.820027146,false,-0.013828771,0.973402113,0.992409847,false,-0.48847645,0.245663398,0.427621221,false,0.164118136,0.671407963,0.8614433,false,"chr_001",4098822,4100885,"-","MS01G04640","--","--","--","uncharacterized protein LOC103455833 isoform X2 [Malus domestica]","--","A0A498HQD1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72950.1};","--","--","--","--","--","--"]
["MS01G04670",0.8902,0.9592,1.9521,2.1182,1.8864,2.2765,1.3897,2.4149,1.5327,2.9651,2.3496,1.8243,2.2688,2.4858,2.397,27,29,58,47,50,58,32,52,42,73,61,56,54,59,57,1.106991483,0.006332004,0.014671244,"up",1.212084209,0.000880464,0.00209711,"up",0.944307835,0.015808262,0.028714775,false,0.782866998,0.072962633,0.112183489,false,-0.313804944,0.403538323,0.555696607,false,-0.419494663,0.207303835,0.39059841,false,-0.167056043,0.630540194,0.902074927,false,-0.143251318,0.657756242,0.799406021,false,-0.242488029,0.375944591,0.660954357,false,"chr_001",4128447,4129743,"+","MS01G04670","--","K14496 abscisic acid receptor PYR/PYL family | (RefSeq) abscisic acid receptor PYL2-like (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction","abscisic acid receptor PYL2-like [Malus domestica]","PYL2_ARATH RecName: Full=Abscisic acid receptor PYL2; AltName: Full=PYR1-like protein 2; AltName: Full=Regulatory components of ABA receptor 14;","A0A498HTY6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72947.1};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0062049,protein phosphatase inhibitor complex; GO:0010427,abscisic acid binding; GO:0042802,identical protein binding; GO:0042803,protein homodimerization activity; GO:0004864,protein phosphatase inhibitor activity; GO:0038023,signaling receptor activity; GO:0009738,abscisic acid-activated signaling pathway; GO:0080163,regulation of protein serine/threonine phosphatase activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0008289,lipid binding; GO:0019840,isoprenoid binding; GO:0031406,carboxylic acid binding; GO:0033293,monocarboxylic acid binding; GO:0036094,small molecule binding; GO:0042562,hormone binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0043177,organic acid binding; GO:0043178,alcohol binding; GO:0005515,protein binding; GO:0046983,protein dimerization activity; GO:0004857,enzyme inhibitor activity; GO:0019208,phosphatase regulator activity; GO:0019212,phosphatase inhibitor activity; GO:0019888,protein phosphatase regulator activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0060089,molecular transducer activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006470,protein dephosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0010921,regulation of phosphatase activity; GO:0016311,dephosphorylation; GO:0019220,regulation of phosphate metabolic process; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031399,regulation of protein modification process; GO:0035303,regulation of dephosphorylation; GO:0035304,regulation of protein dephosphorylation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043666,regulation of phosphoprotein phosphatase activity; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0050790,regulation of catalytic activity; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051174,regulation of phosphorus metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051336,regulation of hydrolase activity; GO:0060255,regulation of macromolecule metabolic process; GO:0065009,regulation of molecular function; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0016020,membrane; GO:0071944,cell periphery; GO:0032991,protein-containing complex","PF10604.12:Polyketide cyclase / dehydrase and lipid transport","--","--","--"]
["MS01G04710",17.0798,16.3904,17.0883,2.4109,1.9474,3.0942,1.508,1.787,2.9454,3.0877,3.7233,3.9744,2.9573,3.4006,2.3285,552,528,541,57,55,84,37,41,86,81,103,130,75,86,59,-2.040141506,"3.85083E-35","2.61E-33","down",-2.248368528,"1.89224E-31","6.01627E-30","down",-2.554245154,"9.37564E-36","4.49699E-34","down",-2.731478672,"3.87874E-29","9.23879E-28","down",-0.67828508,0.030297468,0.076666847,false,-0.471903836,0.161441683,0.329272972,false,-0.180857006,0.604269961,0.893024763,false,-0.49544541,0.063483841,0.164983593,false,-0.282251876,0.335538743,0.626378158,false,"chr_001",4145185,4148772,"-","MS01G04710","--","K18266 protein NDRG1 | (RefSeq) protein NDL1-like (A)","--","protein NDL2-like [Malus domestica]","NDL2_ARATH RecName: Full=Protein NDL2 {ECO:0000305}; AltName: Full=Protein N-MYC DOWNREGULATED-LIKE 2 {ECO:0000303|PubMed:19948787};","A0A540KTC6_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD77458.1};","Differentiation-related gene 1 protein (NDR1 protein), related proteins","GO:0005737,cytoplasm; GO:2000012,regulation of auxin polar transport; GO:0040008,regulation of growth; GO:0009737,response to abscisic acid; GO:0009409,response to cold; GO:0009753,response to jasmonic acid; GO:0006810,transport; GO:0008150,biological_process; GO:0009914,hormone transport; GO:0009926,auxin polar transport; GO:0010817,regulation of hormone levels; GO:0032879,regulation of localization; GO:0050789,regulation of biological process; GO:0051049,regulation of transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0060918,auxin transport; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0040007,growth; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0070542,response to fatty acid; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF03096.17:Ndr family","--","--","--"]
["MS01G04740",105.9698,125.1422,116.2609,61.0062,54.039,66.0458,48.9457,40.3751,52.1676,68.2096,76.5729,77.4361,62.6557,71.1359,64.2827,5675,6680,6099,2390,2529,2971,1990,1535,2524,2965,3510,4197,2633,2981,2699,-0.45905563,"7.46044E-05",0.000273088,false,-0.518334727,"1.95913E-05","6.26466E-05",false,-0.728263013,"2.80277E-08","1.38309E-07",false,-1.015036935,"2.57426E-12","1.88445E-11","down",-0.542796362,"6.57032E-05",0.000397099,false,-0.480947895,0.000769554,0.005341327,false,-0.288142947,0.046851349,0.391506905,false,-0.252207474,0.029858527,0.093874627,false,-0.184785269,0.135723622,0.386479079,false,"chr_001",4175751,4181759,"+","MS01G04740","--","K13210 far upstream element-binding protein | (RefSeq) far upstream element-binding protein 2 isoform X1 (A)","--","far upstream element-binding protein 2 isoform X1 [Malus domestica]","BTR1_ARATH RecName: Full=Protein BTR1 {ECO:0000303|PubMed:18762309}; AltName: Full=Binding to ToMV RNA 1 {ECO:0000303|PubMed:18762309};","A0A498HQC3_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72940.1};","K-homology type RNA binding proteins","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0003729,mRNA binding; GO:0003727,single-stranded RNA binding; GO:0046719,regulation by virus of viral protein levels in host cell; GO:0010468,regulation of gene expression; GO:0008380,RNA splicing; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0008150,biological_process; GO:0016032,viral process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050789,regulation of biological process; GO:0050792,regulation of viral process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0008152,metabolic process; GO:0010467,gene expression; GO:0019222,regulation of metabolic process; GO:0043170,macromolecule metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009987,cellular process; GO:0016070,RNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery","PF00013.32:KH domain","--","--","--"]
["MS01G04750",106.2574,76.3979,40.3656,18.8678,44.9894,22.1452,21.2601,37.8448,33.2794,66.098,32.2989,26.4045,29.1939,29.3283,42.3252,5181,3713,1928,673,1917,907,787,1310,1466,2616,1348,1303,1117,1119,1618,-0.638823413,0.285727611,0.380871335,false,-0.864196997,0.006799404,0.013437307,false,-1.151754529,0.006725411,0.013356653,"down",-0.99903668,0.004261841,0.008778632,false,-0.342969462,0.362215819,0.515434454,false,-0.118184215,0.640288038,0.787077598,false,0.148255402,0.696798393,0.922649996,false,-0.490367245,0.267190985,0.452902042,false,-0.258919766,0.463656712,0.73199503,false,"chr_001",4184324,4187834,"-","MS01G04750","--","K01772 protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] | (RefSeq) ferrochelatase-2, chloroplastic-like (A)","ko00860: Porphyrin metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01240: Biosynthesis of cofactors","ferrochelatase-2, chloroplastic-like [Malus domestica]","HEMH_CUCSA RecName: Full=Ferrochelatase-2, chloroplastic; EC=4.99.1.1; AltName: Full=Ferrochelatase II; AltName: Full=Heme synthase 2; AltName: Full=Protoheme ferro-lyase 2; Flags: Precursor;","A0A5N5GVB6_9ROSA RecName: Full=Ferrochelatase {ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|RuleBase:RU000607};","Protoheme ferro-lyase (ferrochelatase)","GO:0009507,chloroplast; GO:0004325,ferrochelatase activity; GO:0006783,heme biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0006725,cellular aromatic compound metabolic process; GO:0006778,porphyrin-containing compound metabolic process; GO:0006779,porphyrin-containing compound biosynthetic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0033013,tetrapyrrole metabolic process; GO:0033014,tetrapyrrole biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042168,heme metabolic process; GO:0042440,pigment metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046148,pigment biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00762.22:Ferrochelatase","--","--","--"]
["MS01G04760",2.5591,3.0694,2.9627,6.6056,4.8098,5.1571,4.9903,4.1888,5.1113,3.2585,4.9273,5.594,4.3544,4.9878,4.34,179,214,203,338,294,303,265,208,323,185,295,396,239,273,238,0.863950598,0.000139733,0.000485623,false,0.964112621,"1.56339E-08","7.80428E-08",false,1.161902642,"1.72222E-08","8.75768E-08","up",1.017320258,"1.3485E-08","6.5137E-08","up",0.165667339,0.471143201,0.619052397,false,0.068832747,0.691157445,0.822782414,false,-0.145968092,0.469656587,0.84202913,false,0.315978579,0.205242382,0.378990133,false,0.222445956,0.259648074,0.549153935,false,"chr_001",4189138,4194755,"-","MS01G04760","--","--","--","uncharacterized protein LOC126603640 isoform X1 [Malus sylvestris]","PITH1_ARATH RecName: Full=PITH domain-containing protein At3g04780;","A0A540KQ68_MALBA RecName: Full=PITH domain-containing protein {ECO:0000259|PROSITE:PS51532};","Thioredoxin-like protein","GO:0005829,cytosol; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF06201.16:PITH domain","--","--","--"]
["MS01G04800",28.9743,29.1116,29.8116,20.077,12.9973,18.7946,14.9609,10.7266,17.4902,10.0329,12.3851,11.0816,13.1819,14.2596,11.2071,2028,2031,2044,1028,795,1105,795,533,1106,570,742,785,724,781,615,-1.207561339,"2.01258E-26","7.64446E-25","down",-0.892169767,"1.37298E-10","8.7855E-10",false,-0.552140622,0.002811594,0.006035323,false,-0.747588236,"5.45393E-05",0.000158066,false,0.473126089,0.01881063,0.051902356,false,0.160651312,0.443209865,0.633094854,false,-0.195646116,0.405142093,0.808624384,false,0.671230725,0.00058756,0.004016148,false,0.364155747,0.07281735,0.268317583,false,"chr_001",4207890,4214350,"+","MS01G04800","--","--","--","uncharacterized protein LOC126601160 isoform X3 [Malus sylvestris]","--","A0A540KQ63_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD76364.1};","--","--","PF07797.17:Protein of unknown function (DUF1639)","--","--","--"]
["MS01G04810",90.3562,84.4319,93.8068,12.126,9.1097,10.7636,10.1114,15.6192,17.2457,13.9409,22.2551,15.9566,8.9132,11.4089,9.2837,1589,1480,1616,156,140,159,135,195,274,199,335,284,123,157,128,-2.184704068,"4.75303E-34","2.98844E-32","down",-2.88949633,"1.83778E-79","3.47965E-77","down",-2.859138047,"1.42506E-69","2.90732E-67","down",-2.363429071,"5.88419E-31","1.5519E-29","down",-0.166595921,0.536443887,0.67530357,false,0.542276119,0.032738204,0.105553339,false,0.494364948,0.058352231,0.430795061,false,-0.657733144,0.006212247,0.027429934,false,0.056257311,0.796315716,0.921634687,false,"chr_001",4217204,4218468,"+","MS01G04810","--","--","--","hypothetical protein D8674_015408 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5GVA9_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2619539.1};","--","--","--","--","--","--"]
["MS01G04870",23.2619,25.9963,22.9452,52.1924,47.6592,53.283,54.0404,38.8041,54.7187,39.6218,43.651,45.29,45.8213,48.6258,45.2773,711,792,687,1167,1273,1368,1254,842,1511,983,1142,1401,1099,1163,1085,1.017471876,"8.97141E-16","1.44319E-14","up",1.244119549,"1.06483E-22","1.9272E-21","up",1.297144214,"1.66081E-22","3.48127E-21","up",1.310707038,"1.84856E-13","1.51292E-12","up",0.306714557,0.07351447,0.155781577,false,0.082463025,0.628982092,0.779826313,false,0.01163901,0.94682804,0.986845068,false,0.29698208,0.011887493,0.046099764,false,0.07837357,0.509304228,0.764404336,false,"chr_001",4256168,4259978,"+","MS01G04870","--","K18740 exonuclease 3'-5' domain-containing protein 1 | (RefSeq) uncharacterized protein LOC103410690 (A)","--","uncharacterized protein LOC126603388 isoform X1 [Malus sylvestris]","RP6L2_ARATH RecName: Full=Protein RRP6-like 2 {ECO:0000303|PubMed:18285452}; Short=AtRRP6L2 {ECO:0000303|PubMed:18285452};","A0A540KQE8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD76369.1};","Predicted 3'-5' exonuclease","GO:0005737,cytoplasm; GO:0000176,nuclear exosome (RNase complex); GO:0005730,nucleolus; GO:0005634,nucleus; GO:0000175,3'-5'-exoribonuclease activity; GO:0000166,nucleotide binding; GO:0003727,single-stranded RNA binding; GO:0000467,exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0080188,gene silencing by RNA-directed DNA methylation; GO:0071044,histone mRNA catabolic process; GO:0071040,nuclear polyadenylation-dependent antisense transcript catabolic process; GO:0071039,nuclear polyadenylation-dependent CUT catabolic process; GO:0071035,nuclear polyadenylation-dependent rRNA catabolic process; GO:0071036,nuclear polyadenylation-dependent snoRNA catabolic process; GO:0071037,nuclear polyadenylation-dependent snRNA catabolic process; GO:0071038,nuclear polyadenylation-dependent tRNA catabolic process; GO:0043633,polyadenylation-dependent RNA catabolic process; GO:0071051,polyadenylation-dependent snoRNA 3'-end processing; GO:1902466,positive regulation of histone H3-K27 trimethylation; GO:0006364,rRNA processing; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004518,nuclease activity; GO:0004527,exonuclease activity; GO:0004532,exoribonuclease activity; GO:0004540,ribonuclease activity; GO:0008408,3'-5' exonuclease activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016796,exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters; GO:0016896,exoribonuclease activity, producing 5'-phosphomonoesters; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0005488,binding; GO:0036094,small molecule binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0000459,exonucleolytic trimming involved in rRNA processing; GO:0000460,maturation of 5.8S rRNA; GO:0000466,maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000469,cleavage involved in rRNA processing; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016072,rRNA metabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0031123,RNA 3'-end processing; GO:0031125,rRNA 3'-end processing; GO:0034470,ncRNA processing; GO:0034641,cellular nitrogen compound metabolic process; GO:0034660,ncRNA metabolic process; GO:0042254,ribosome biogenesis; GO:0043170,macromolecule metabolic process; GO:0043628,small regulatory ncRNA 3'-end processing; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0090304,nucleic acid metabolic process; GO:0090305,nucleic acid phosphodiester bond hydrolysis; GO:0090501,RNA phosphodiester bond hydrolysis; GO:0090503,RNA phosphodiester bond hydrolysis, exonucleolytic; GO:1901360,organic cyclic compound metabolic process; GO:0006325,chromatin organization; GO:0006338,chromatin remodeling; GO:0006346,DNA methylation-dependent heterochromatin formation; GO:0009892,negative regulation of metabolic process; GO:0010468,regulation of gene expression; GO:0010605,negative regulation of macromolecule metabolic process; GO:0010629,negative regulation of gene expression; GO:0016043,cellular component organization; GO:0019222,regulation of metabolic process; GO:0031047,gene silencing by RNA; GO:0031048,small non-coding RNA-dependent heterochromatin formation; GO:0031507,heterochromatin formation; GO:0040029,epigenetic regulation of gene expression; GO:0045814,negative regulation of gene expression, epigenetic; GO:0048519,negative regulation of biological process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0070828,heterochromatin organization; GO:0140718,facultative heterochromatin formation; GO:0000956,nuclear-transcribed mRNA catabolic process; GO:0006401,RNA catabolic process; GO:0006402,mRNA catabolic process; GO:0008334,histone mRNA metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0016071,mRNA metabolic process; GO:0019439,aromatic compound catabolic process; GO:0034655,nucleobase-containing compound catabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0044270,cellular nitrogen compound catabolic process; GO:0046700,heterocycle catabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901575,organic substance catabolic process; GO:0034661,ncRNA catabolic process; GO:0042868,antisense RNA metabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0043634,polyadenylation-dependent ncRNA catabolic process; GO:0071025,RNA surveillance; GO:0071027,nuclear RNA surveillance; GO:0071029,nuclear ncRNA surveillance; GO:0071041,antisense RNA transcript catabolic process; GO:0071046,nuclear polyadenylation-dependent ncRNA catabolic process; GO:0071034,CUT catabolic process; GO:0071043,CUT metabolic process; GO:0016075,rRNA catabolic process; GO:0016074,sno(s)RNA metabolic process; GO:0016077,sno(s)RNA catabolic process; GO:0016073,snRNA metabolic process; GO:0016076,snRNA catabolic process; GO:0006399,tRNA metabolic process; GO:0016078,tRNA catabolic process; GO:0106354,tRNA surveillance; GO:0031126,sno(s)RNA 3'-end processing; GO:0043144,sno(s)RNA processing; GO:0006479,protein methylation; GO:0008213,protein alkylation; GO:0009893,positive regulation of metabolic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016570,histone modification; GO:0016571,histone methylation; GO:0018022,peptidyl-lysine methylation; GO:0018193,peptidyl-amino acid modification; GO:0018205,peptidyl-lysine modification; GO:0019538,protein metabolic process; GO:0031056,regulation of histone modification; GO:0031058,positive regulation of histone modification; GO:0031060,regulation of histone methylation; GO:0031062,positive regulation of histone methylation; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031399,regulation of protein modification process; GO:0031401,positive regulation of protein modification process; GO:0032259,methylation; GO:0034968,histone lysine methylation; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:0043414,macromolecule methylation; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051247,positive regulation of protein metabolic process; GO:0061085,regulation of histone H3-K27 methylation; GO:0061087,positive regulation of histone H3-K27 methylation; GO:0070734,histone H3-K27 methylation; GO:0080090,regulation of primary metabolic process; GO:0098532,histone H3-K27 trimethylation; GO:1901564,organonitrogen compound metabolic process; GO:1902464,regulation of histone H3-K27 trimethylation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0000178,exosome (RNase complex); GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0140513,nuclear protein-containing complex; GO:1902494,catalytic complex; GO:1905354,exoribonuclease complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle","PF01612.23:3'-5' exonuclease","--","--","--"]
["MS01G04920",55.5586,50.3116,108.4413,126.8629,68.3383,78.5282,82.7736,61.2597,67.0237,174.4507,186.8252,199.1259,182.0429,203.1626,169.0652,534,482,1021,892,574,634,604,418,582,1361,1537,1937,1373,1528,1274,1.580912418,"1.07889E-08","7.62551E-08","up",1.672272663,"5.49166E-10","3.29555E-09","up",0.576304086,0.097031242,0.142717523,false,0.273126637,0.357138745,0.438609547,false,-1.297845257,"1.08621E-14","3.40563E-13","down",-1.386339316,"4.14107E-15","3.87148E-13","down",-0.3053353,0.264074192,0.716273106,false,-0.989199369,"8.28224E-05",0.000775422,false,-1.072674625,"2.00023E-05",0.000597613,"down","chr_001",4284131,4284541,"-","MS01G04920","--","--","--","zinc finger CCCH domain-containing protein 23-like [Malus sylvestris]","C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20;","A0A540L0K4_MALBA RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};","CCCH-type Zn-finger protein","GO:0005886,plasma membrane; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0051607,defense response to virus; GO:0006355,regulation of DNA-templated transcription; GO:0006979,response to oxidative stress; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009615,response to virus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0140546,defense response to symbiont; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G04930",82.3481,69.7459,132.6115,141.1745,82.5173,96.1835,94.0447,76.0224,87.7778,213.5987,215.7269,213.8171,221.1117,245.992,194.6965,1271,1073,2005,1594,1113,1247,1102,833,1224,2676,2850,3340,2678,2971,2356,1.369383609,"3.70952E-09","2.80861E-08","up",1.516382259,"7.90005E-11","5.17621E-10","up",0.388693743,0.187728686,0.253006047,false,0.14778929,0.543630276,0.620415862,false,-1.210218738,"3.20744E-19","1.65055E-17","down",-1.354682998,"3.08534E-17","4.00848E-15","down",-0.242382765,0.30043707,0.743436167,false,-0.964948039,"1.51614E-05",0.000177993,false,-1.103926431,"1.60249E-06","7.21071E-05","down","chr_001",4284580,4285239,"-","MS01G04930","--","K23047 E3 ubiquitin-protein ligase UNKL [EC:2.3.2.27] | (RefSeq) zinc finger CCCH domain-containing protein 2 (A)","--","C3HL domain class transcription factor [Malus domestica]","C3H49_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 49; Short=AtC3H49;","D9ZIV3_MALDO SubName: Full=C3HL domain class transcription factor {ECO:0000313|EMBL:ADL36656.1};","CCCH-type Zn-finger protein","GO:0005886,plasma membrane; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF00642.27:Zinc finger C-x8-C-x5-C-x3-H type (and similar)","C3H","TF","C3H"]
["MS01G04940",1.311,1.5216,1.2333,0.1757,0.1618,0.1224,0.1016,0.1448,0.1138,0.4434,0.6457,0.4953,0.1966,0.1643,0.1311,102,118,94,10,11,8,6,8,8,28,43,39,12,10,8,-1.179171293,"2.70794E-05",0.000108007,"down",-2.754721234,"4.39479E-13","3.66071E-12","down",-2.934327615,"6.52814E-14","6.30708E-13","down",-3.225869072,"1.95865E-14","1.75195E-13","down",-2.030820489,"4.91124E-05",0.000305404,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.735702233,0.000271708,0.002117789,"down","NA","NA","NA","NA","chr_001",4293518,4298822,"+","MS01G04940","--","--","--","endo-1,4-beta-xylanase 1-like [Malus sylvestris]","XYN1_ARATH RecName: Full=Endo-1,4-beta-xylanase 1 {ECO:0000303|PubMed:12154138}; Short=AtXyn1 {ECO:0000303|PubMed:12154138}; Short=Xylan endohydrolase 1 {ECO:0000303|PubMed:12154138}; Short=Xylanase 1 {ECO:0000303|PubMed:12154138}; EC=3.2.1.8 {ECO:0000255|PROSITE-ProRule:PRU01096, ECO:0000269|PubMed:12154138};","A0A498HTN1_MALDO RecName: Full=GH10 domain-containing protein {ECO:0000259|PROSITE:PS51760};","--","GO:0005576,extracellular region; GO:0009505,plant-type cell wall; GO:0031176,endo-1,4-beta-xylanase activity; GO:0045493,xylan catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0097599,xylanase activity; GO:0000272,polysaccharide catabolic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009987,cellular process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010410,hemicellulose metabolic process; GO:0016052,carbohydrate catabolic process; GO:0016998,cell wall macromolecule catabolic process; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0044347,cell wall polysaccharide catabolic process; GO:0045491,xylan metabolic process; GO:0071554,cell wall organization or biogenesis; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:2000895,hemicellulose catabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0005618,cell wall; GO:0030312,external encapsulating structure; GO:0071944,cell periphery","PF02018.20:Carbohydrate binding domain","--","--","--"]
["MS01G04950",6.2904,7.0855,6.607,2.2972,1.2733,3.6768,1.8545,3.3588,2.4633,3.2454,6.1287,3.9267,1.9968,1.9444,3.6496,277,311,285,74,49,136,62,105,98,116,231,175,69,67,126,-0.410940893,0.090968564,0.147283149,false,-1.107163796,"3.23242E-05","9.96306E-05","down",-1.26806097,0.000178541,0.000483149,"down",-1.099068073,"1.59285E-05","5.02996E-05","down",-0.674834925,0.041571657,0.099200647,false,0.026265306,0.940586652,0.968587594,false,0.175023529,0.667788451,0.914427045,false,-0.844690677,0.032383016,0.099724093,false,-0.138667873,0.738431952,0.893714822,false,"chr_001",4312707,4317136,"+","MS01G04950","--","--","--","homeobox protein knotted-1-like 2 [Malus domestica]","KNAP2_MALDO RecName: Full=Homeobox protein knotted-1-like 2; AltName: Full=KNAP2;","D9ZJ20_MALDO SubName: Full=HD domain class transcription factor {ECO:0000313|EMBL:ADL36723.1};","Transcription factor MEIS1 and related HOX domain proteins","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003700,DNA-binding transcription factor activity; GO:0140110,transcription regulator activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03791.16:KNOX2 domain","HB-KNOX","TF","HB->HB-KNOX"]
["MS01G04960",5.5506,12.9299,4.6936,14.9146,4.2799,4.8496,6.8091,8.7247,18.5633,1.8783,2.5048,1.836,3.8252,2.6486,2.5827,233,541,193,458,157,171,217,260,704,64,90,78,126,87,85,-1.720758709,"1.34264E-05","5.65027E-05","down",-1.063684972,0.006144948,0.012266225,"down",0.264490886,0.620384561,0.687636009,false,0.814323371,0.065008437,0.101245996,false,2.553318737,"5.0378E-12","1.14391E-10","up",1.901833454,"2.16341E-07","4.65899E-06","up",0.558704216,0.274911331,0.724318209,false,1.998665306,"2.42415E-05",0.000269122,"up",1.350399161,0.003782149,0.035754984,"up","chr_001",4324921,4327068,"-","MS01G04960","--","K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein HAT22-like (A)","--","hypothetical protein DVH24_012607 [Malus domestica]","HAT22_ARATH RecName: Full=Homeobox-leucine zipper protein HAT22; AltName: Full=Homeodomain-leucine zipper protein HAT22; Short=HD-ZIP protein 22;","A0A498HVJ8_MALDO RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};","Transcription factor HEX, contains HOX and HALZ domains","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000976,transcription cis-regulatory region binding; GO:0009738,abscisic acid-activated signaling pathway; GO:0009737,response to abscisic acid; GO:0009735,response to cytokinin; GO:0009414,response to water deprivation; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0001101,response to acid chemical; GO:0006950,response to stress; GO:0009415,response to water; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00046.32:Homeodomain","HB-HD-ZIP","TF","HB->HB-HD-ZIP"]
["MS01G04970",24.2153,23.0365,37.778,131.8226,96.8536,94.3528,133.9253,126.8483,130.9884,82.7247,81.1773,78.1691,137.559,98.8078,95.8563,850,806,1299,3385,2971,2782,3569,3161,4154,2357,2439,2777,3789,2714,2638,1.702902346,"1.02835E-16","1.81643E-15","up",2.268509941,"2.7371E-22","4.78095E-21","up",2.148247191,"2.86877E-18","4.16419E-17","up",2.494239195,"2.06468E-34","6.69109E-33","up",0.803033742,"4.95497E-12","1.12691E-10",false,0.240545494,0.202890257,0.385035118,false,0.343736673,0.066154495,0.452075472,false,0.461980784,0.014568895,0.054096433,false,-0.094631823,0.679726117,0.865270442,false,"chr_001",4338355,4341089,"+","MS01G04970","--","K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] | (RefSeq) branched-chain-amino-acid aminotransferase 2, chloroplastic-like (A)","ko00270: Cysteine and methionine metabolism; ko00280: Valine, leucine and isoleucine degradation; ko00290: Valine, leucine and isoleucine biosynthesis; ko00770: Pantothenate and CoA biosynthesis; ko00966: Glucosinolate biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01210: 2-Oxocarboxylic acid metabolism; ko01230: Biosynthesis of amino acids; ko01240: Biosynthesis of cofactors","branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Malus domestica]","BCAT2_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 2, chloroplastic; Short=Atbcat-2; EC=2.6.1.42; Flags: Precursor;","A0A540L0M7_MALBA RecName: Full=Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};","Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily","GO:0009507,chloroplast; GO:0004084,branched-chain-amino-acid transaminase activity; GO:0052656,L-isoleucine transaminase activity; GO:0052654,L-leucine transaminase activity; GO:0050048,L-leucine:2-oxoglutarate aminotransferase activity; GO:0052655,L-valine transaminase activity; GO:0009097,isoleucine biosynthetic process; GO:0009098,leucine biosynthetic process; GO:0071669,plant-type cell wall organization or biogenesis; GO:0009099,valine biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008483,transaminase activity; GO:0016740,transferase activity; GO:0016769,transferase activity, transferring nitrogenous groups; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006549,isoleucine metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009058,biosynthetic process; GO:0009081,branched-chain amino acid metabolic process; GO:0009082,branched-chain amino acid biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901605,alpha-amino acid metabolic process; GO:1901607,alpha-amino acid biosynthetic process; GO:0006551,leucine metabolic process; GO:0071554,cell wall organization or biogenesis; GO:0006573,valine metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF01063.22:Amino-transferase class IV","--","--","--"]
["MS01G04980",0.1606,0.2256,0.41,1.1638,0.7536,0.4877,0.5924,0.7354,0.5156,0.3562,0.2346,0.2857,0.348,0.4722,0.4405,20,28,50,106,82,51,56,65,58,36,25,36,34,46,43,0.33909799,0.457261559,0.557309921,false,0.962166259,0.018707716,0.033305396,false,1.825300964,0.00010626,0.000299439,"up",1.50616742,0.000203397,0.00053332,"up",1.179690786,0.000754519,0.003395577,"up",0.554251431,0.080211495,0.201716894,false,-0.320407799,0.415493979,0.813407777,false,1.503821133,0.000437219,0.003143704,"up",0.886131241,0.024232017,0.13229526,false,"chr_001",4341280,4347402,"-","MS01G04980","--","--","--","uncharacterized protein LOC126605428 [Malus sylvestris]","NOV_ARATH RecName: Full=Protein NO VEIN {ECO:0000303|PubMed:19880797}; AltName: Full=Protein EMBRYO DEFECTIVE 2597 {ECO:0000303|PubMed:15266054};","A0A498HUS8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72921.1};","--","GO:0005634,nucleus; GO:0009926,auxin polar transport; GO:0001708,cell fate specification; GO:0009793,embryo development ending in seed dormancy; GO:0010305,leaf vascular tissue pattern formation; GO:0048364,root development; GO:0019827,stem cell population maintenance; GO:0006810,transport; GO:0008150,biological_process; GO:0009914,hormone transport; GO:0010817,regulation of hormone levels; GO:0051179,localization; GO:0051234,establishment of localization; GO:0060918,auxin transport; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0009987,cellular process; GO:0030154,cell differentiation; GO:0032502,developmental process; GO:0045165,cell fate commitment; GO:0048869,cellular developmental process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0003002,regionalization; GO:0007389,pattern specification process; GO:0010051,xylem and phloem pattern formation; GO:0022622,root system development; GO:0099402,plant organ development; GO:0098727,maintenance of cell number; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13589.9:Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase","--","--","--"]
["MS01G05010",23.3082,25.0179,14.9752,17.6178,14.6607,17.4487,17.8643,14.1579,18.0115,7.1161,8.6211,8.7117,12.9546,12.2918,9.9638,1832,1960,1153,1013,1007,1152,1066,790,1279,454,580,693,799,756,614,-1.193260224,"1.34008E-07","8.00497E-07","down",-0.556955218,0.016080235,0.029111977,false,-0.141020706,0.548212347,0.622319942,false,-0.063794045,0.785580022,0.831656189,false,1.143007704,"4.79714E-13","1.25246E-11","up",0.509552377,0.004473222,0.022451334,false,0.07687584,0.624023396,0.900615961,false,1.068474808,"1.90413E-13","1.22291E-11","up",0.441079789,0.009290324,0.068522939,false,"chr_001",4369934,4376034,"-","MS01G05010","--","K21989 calcium permeable stress-gated cation channel | (RefSeq) CSC1-like protein RXW8 (A)","--","CSC1-like protein RXW8 isoform X1 [Malus sylvestris]","CSCLA_ARATH RecName: Full=CSC1-like protein RXW8;","A0A498HPZ8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72919.1};","Uncharacterized conserved protein","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005227,calcium activated cation channel activity; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005216,ion channel activity; GO:0005261,cation channel activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015267,channel activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022803,passive transmembrane transporter activity; GO:0022836,gated channel activity; GO:0022839,ion gated channel activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF02714.18:Calcium-dependent channel, 7TM region, putative phosphate","--","--","--"]
["MS01G05050",2.0507,1.7145,1.3763,0.1817,0.1086,0.2261,0.2751,0.3477,0.2942,1.3802,1.2645,1.5385,0.484,0.825,0.5086,108,90,71,7,5,10,11,13,14,59,57,82,20,34,21,-0.111300455,0.688860518,0.76473636,false,-1.213543726,0.000552958,0.001369621,"down",-3.117201605,"9.59181E-12","7.34074E-11","down",-2.213848838,"1.44634E-08","6.95023E-08","down",-2.088120501,"4.79659E-08","5.81032E-07","down",-0.982912475,0.042627051,0.127996787,false,"NA","NA","NA","NA",-2.987634288,"4.95117E-11","2.13276E-09","down",-1.879666245,0.000760586,0.010938652,"down","chr_001",4414588,4419452,"-","MS01G05050","--","K00511 squalene monooxygenase [EC:1.14.14.17] | (RefSeq) squalene monooxygenase (A)","ko00100: Steroid biosynthesis; ko00909: Sesquiterpenoid and triterpenoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","squalene monooxygenase SE1-like [Malus sylvestris]","SQE1_PANGI RecName: Full=Squalene monooxygenase SE1 {ECO:0000303|Ref.1}; EC=1.14.14.17 {ECO:0000250|UniProtKB:Q9SM02}; AltName: Full=Squalene epoxidase 1 {ECO:0000303|PubMed:19857882, ECO:0000303|PubMed:29509695, ECO:0000303|Ref.1, ECO:0000303|Ref.2}; Short=PgSQE1 {ECO:0000303|PubMed:19857882, ECO:0000303|PubMed:29509695}; Short=SE {ECO:0000303|Ref.1, ECO:0000303|Ref.2}; Short=SE1 {ECO:0000303|PubMed:19857882}; Short=gse {ECO:0000303|PubMed:15493471};","A0A498HRK4_MALDO RecName: Full=Squalene monooxygenase {ECO:0000256|ARBA:ARBA00012312, ECO:0000256|RuleBase:RU367121}; EC=1.14.14.17 {ECO:0000256|ARBA:ARBA00012312, ECO:0000256|RuleBase:RU367121};","Squalene monooxygenase","GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0050660,flavin adenine dinucleotide binding; GO:0004506,squalene monooxygenase activity; GO:0009723,response to ethylene; GO:0042542,response to hydrogen peroxide; GO:0009753,response to jasmonic acid; GO:0010038,response to metal ion; GO:0002238,response to molecule of fungal origin; GO:0071731,response to nitric oxide; GO:0009751,response to salicylic acid; GO:1902438,response to vanadate(3-); GO:0016126,sterol biosynthetic process; GO:0046246,terpene biosynthetic process; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004497,monooxygenase activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0000302,response to reactive oxygen species; GO:0006950,response to stress; GO:0006979,response to oxidative stress; GO:0010035,response to inorganic substance; GO:1901700,response to oxygen-containing compound; GO:0033993,response to lipid; GO:0070542,response to fatty acid; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:1901698,response to nitrogen compound; GO:0014070,response to organic cyclic compound; GO:0006629,lipid metabolic process; GO:0006694,steroid biosynthetic process; GO:0008152,metabolic process; GO:0008202,steroid metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0016125,sterol metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0006720,isoprenoid metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0009987,cellular process; GO:0042214,terpene metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0120251,hydrocarbon biosynthetic process; GO:0120252,hydrocarbon metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF08491.13:Squalene epoxidase","--","--","--"]
["MS01G05060",3.7269,5.707,4.739,2.0557,1.646,2.0238,1.8086,2.9472,2.533,2.8999,3.8194,3.8117,2.2497,3.2587,2.9189,57,87,71,23,22,26,21,32,35,36,50,59,27,39,35,-0.241890226,0.418856369,0.519086792,false,-0.458950494,0.155010431,0.214773576,false,-1.09787765,0.0016674,0.00374464,"down",-0.678919513,0.052832228,0.084303732,false,-0.422864577,0.233892974,0.376066328,false,-0.203460819,0.592923894,0.752868209,false,0.418953047,0.298815381,0.742166741,false,-0.838413828,0.018356723,0.064611568,false,-0.613569577,0.103976875,0.331725485,false,"chr_001",4440959,4442450,"+","MS01G05060","--","--","--","uncharacterized protein LOC103455857 [Malus domestica]","--","A0A498HVI7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72913.1};","--","--","PF00633.26:Helix-hairpin-helix motif","--","--","--"]
["MS01G05080",15.3853,9.5991,7.2801,3.1248,6.4376,3.4058,4.6336,10.084,6.8482,8.9207,5.645,5.3558,4.2213,5.755,7.0359,1124,699,521,167,411,209,257,523,452,529,353,396,242,329,403,-0.503687601,0.128750127,0.197246876,false,-0.642254322,0.031724237,0.053301487,false,-1.091218954,0.00439475,0.009053325,"down",-0.302219874,0.390425773,0.472968757,false,0.216707664,0.526267793,0.66686724,false,0.3548286,0.251313333,0.442723738,false,0.784911946,0.045613746,0.387408528,false,-0.566301655,0.125770777,0.271172342,false,-0.421272589,0.221048722,0.504697568,false,"chr_001",4459150,4462775,"+","MS01G05080","--","K20887 xyloglucan glycosyltransferase 4 [EC:2.4.1.-] | (RefSeq) xyloglucan glycosyltransferase 4-like (A)","--","hypothetical protein DVH24_012595 [Malus domestica]","CSLCC_ARATH RecName: Full=Probable xyloglucan glycosyltransferase 12 {ECO:0000303|PubMed:11027699}; EC=2.4.1.- {ECO:0000250|UniProtKB:Q9LJP4}; AltName: Full=Cellulose synthase-like protein C12 {ECO:0000303|PubMed:11027699}; Short=AtCslC12 {ECO:0000303|PubMed:11027699};","A0A498HUR9_MALDO RecName: Full=Glyco_trans_2-like domain-containing protein {ECO:0000259|Pfam:PF13632};","--","GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0009506,plasmodesma; GO:0016757,glycosyltransferase activity; GO:0042803,protein homodimerization activity; GO:0071555,cell wall organization; GO:0099402,plant organ development; GO:0048868,pollen tube development; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0009856,pollination; GO:0022414,reproductive process; GO:0044706,multi-multicellular organism process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF13632.9:Glycosyl transferase family group 2","--","--","--"]
["MS01G05090",3.7123,3.7244,4.3818,1.0466,0.9558,2.0993,0.7946,1.5034,1.3611,2.6584,3.5239,1.8111,1.3306,1.6901,1.7756,160,160,185,33,36,76,26,46,53,93,130,79,45,57,60,-0.383243691,0.162245972,0.239570815,false,-1.008648502,"1.25996E-05","4.15817E-05","down",-1.322084249,"4.70584E-05",0.000141156,"down",-1.409244227,"7.9119E-07","3.0231E-06","down",-1.015698471,0.006922675,0.02272045,"down",-0.383864297,0.266082221,0.45854361,false,-0.0828381,0.846633551,0.96416284,false,-0.929780682,0.020898962,0.071313718,false,-0.289999154,0.437253238,0.713099935,false,"chr_001",4463145,4465739,"-","MS01G05090","--","K12126 phytochrome-interacting factor 3 | (RefSeq) transcription factor PIF3-like (A)","ko04075: Plant hormone signal transduction; ko04712: Circadian rhythm - plant","transcription factor bHLH74 isoform X1 [Malus domestica]","BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH 74; AltName: Full=Protein ACTIVATOR FOR CELL ELONGATION 2; AltName: Full=Transcription factor EN 90; AltName: Full=bHLH transcription factor bHLH074;","A0A498HQ87_MALDO RecName: Full=BHLH domain-containing protein {ECO:0000259|PROSITE:PS50888};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046983,protein dimerization activity; GO:0000976,transcription cis-regulatory region binding; GO:0040008,regulation of growth; GO:0006355,regulation of DNA-templated transcription; GO:0009637,response to blue light; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0005515,protein binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0040007,growth; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00010.29:Helix-loop-helix DNA-binding domain","bHLH","TF","bHLH"]
["MS01G05100",1.683,1.1882,1.8454,0,0.0476,0.0495,0,0.1463,0.184,0.4352,1.0924,0.5954,0.053,0.0531,0.0795,81,57,87,0,2,2,0,5,8,17,45,29,2,2,3,-0.976027894,0.013374729,0.028305996,false,-4.373689641,"1.60652E-11","1.13494E-10","down",-5.323472521,"7.70554E-11","5.32523E-10","down",-3.531071444,"1.82986E-09","9.83119E-09","down",-2.553996674,0.001113868,0.004753685,"down","NA","NA","NA","NA","NA","NA","NA","NA",-4.340442103,"3.70125E-06","5.22463E-05","down","NA","NA","NA","NA","chr_001",4478715,4482040,"-","MS01G05100","--","K09285 AP2-like factor, ANT lineage | (RefSeq) AP2-like ethylene-responsive transcription factor ANT (A)","--","hypothetical protein DVH24_012593 [Malus domestica]","ANT_ARATH RecName: Full=AP2-like ethylene-responsive transcription factor ANT {ECO:0000303|PubMed:8742706, ECO:0000303|PubMed:8742707}; AltName: Full=Complementing a protein kinase C mutant protein 1; AltName: Full=Protein AINTEGUMENTA {ECO:0000303|PubMed:8742706, ECO:0000303|PubMed:8742707}; AltName: Full=Protein DRAGON; AltName: Full=Protein OVULE MUTANT {ECO:0000303|PubMed:12271029};","A0A498HPY9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72909.1};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0030154,cell differentiation; GO:0051301,cell division; GO:0009908,flower development; GO:0019760,glucosinolate metabolic process; GO:0010492,maintenance of shoot apical meristem identity; GO:0010601,positive regulation of auxin biosynthetic process; GO:0042127,regulation of cell population proliferation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0006082,organic acid metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016143,S-glycoside metabolic process; GO:0019748,secondary metabolic process; GO:0019757,glycosinolate metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901657,glycosyl compound metabolic process; GO:0009888,tissue development; GO:0010073,meristem maintenance; GO:0010074,maintenance of meristem identity; GO:0019827,stem cell population maintenance; GO:0048507,meristem development; GO:0098727,maintenance of cell number; GO:0009058,biosynthetic process; GO:0009850,auxin metabolic process; GO:0009851,auxin biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010600,regulation of auxin biosynthetic process; GO:0010817,regulation of hormone levels; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032350,regulation of hormone metabolic process; GO:0032352,positive regulation of hormone metabolic process; GO:0042445,hormone metabolic process; GO:0042446,hormone biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0046885,regulation of hormone biosynthetic process; GO:0046886,positive regulation of hormone biosynthetic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0090354,regulation of auxin metabolic process; GO:0090355,positive regulation of auxin metabolic process; GO:0008283,cell population proliferation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00847.23:AP2 domain","AP2/ERF-AP2","TF","AP2/ERF->AP2/ERF-AP2"]
["MS01G05110",21.494,23.545,28.0223,6.3719,5.371,6.4356,5.8414,6.0644,6.1627,10.6479,12.6313,11.6423,8.8279,9.7214,8.6705,664,725,848,144,145,167,137,133,172,267,334,364,214,235,210,-0.877927599,"1.12976E-08","7.96015E-08",false,-1.129597276,"1.67723E-12","1.31074E-11","down",-1.793312619,"6.13898E-24","1.41639E-22","down",-1.73049345,"7.3608E-24","1.28436E-22","down",-0.840341681,"5.10172E-07","5.0477E-06",false,-0.585579299,0.001035879,0.006800919,false,0.061339388,0.748730485,0.937860856,false,-0.898874652,"2.53063E-07","4.93047E-06",false,-0.638459146,0.000420376,0.006882442,false,"chr_001",4490286,4492561,"-","MS01G05110","--","--","--","hypothetical protein DVH24_012592 [Malus domestica]","--","A0A498HN14_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72908.1};","--","--","PF11255.11:Protein of unknown function (DUF3054)","--","--","--"]
["MS01G05130",12.7269,10.3283,10.5094,0.4519,0.5674,1.8271,0.4043,0.898,1.2545,4.9161,8.6895,4.4794,2.678,3.8925,2.0178,539,436,436,14,21,65,13,27,48,169,315,192,89,129,67,-0.717249413,0.006939164,0.015900646,false,-1.676215185,"4.82795E-11","3.2329E-10","down",-3.36561384,"8.2724E-15","8.73145E-14","down",-3.430049251,"9.67096E-27","2.00916E-25","down",-2.706244047,"8.84982E-11","1.68491E-09","down",-1.742223996,"4.8827E-05",0.00052967,"down",-0.065883342,0.916576779,0.980112212,false,-2.639367538,"1.14912E-07","2.41713E-06","down",-1.668064236,0.00110343,0.014508954,"down","chr_001",4506442,4509431,"+","MS01G05130","--","K15601 [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65] | (RefSeq) lysine-specific demethylase JMJ25-like (A)","--","growth-regulating factor 1-like [Malus domestica]","GRF2_ARATH RecName: Full=Growth-regulating factor 2; Short=AtGRF2; AltName: Full=Transcription activator GRF2;","A0A498HN75_MALDO RecName: Full=Growth-regulating factor {ECO:0000256|RuleBase:RU367127};","--","GO:0005634,nucleus; GO:0005524,ATP binding; GO:0000976,transcription cis-regulatory region binding; GO:0008285,negative regulation of cell population proliferation; GO:0006355,regulation of DNA-templated transcription; GO:0048364,root development; GO:0006351,DNA-templated transcription; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0008283,cell population proliferation; GO:0009987,cellular process; GO:0042127,regulation of cell population proliferation; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0007275,multicellular organism development; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF08879.13:WRC","GRF","TF","GRF"]
["MS01G05150",17.5697,15.4739,18.4647,29.1329,24.714,36.1572,21.5968,16.931,23.5661,24.5238,28.0233,31.4717,21.6896,27.4246,27.237,1662,1459,1711,2016,2043,2873,1551,1137,2014,1883,2269,3013,1610,2030,2020,0.891488667,"1.16066E-10","1.07251E-09",false,0.858903534,"1.4308E-09","8.17437E-09",false,1.013475709,"1.04532E-09","6.27991E-09","up",0.550516664,0.000600334,0.001450848,false,-0.327809489,0.05089567,0.116198553,false,-0.293042676,0.08859197,0.216630343,false,-0.464007386,0.012751679,0.229868339,false,0.138950792,0.411439988,0.599843303,false,0.178762351,0.30388569,0.596372767,false,"chr_001",4524168,4538965,"+","MS01G05150","--","K12821 pre-mRNA-processing factor 40 | (RefSeq) pre-mRNA-processing protein 40A-like isoform X1 (A)","ko03040: Spliceosome","hypothetical protein C1H46_003711 [Malus baccata]","PR40A_ARATH RecName: Full=Pre-mRNA-processing protein 40A; Short=AtPRP40a {ECO:0000303|PubMed:19467629};","A0A540NID2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE10808.1};","Spliceosomal protein FBP11/Splicing factor PRP40","GO:0016592,mediator complex; GO:0005685,U1 snRNP; GO:0071004,U2-type prespliceosome; GO:0003723,RNA binding; GO:0070063,RNA polymerase binding; GO:0045292,mRNA cis splicing, via spliceosome; GO:0000398,mRNA splicing, via spliceosome; GO:0008380,RNA splicing; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0000375,RNA splicing, via transesterification reactions; GO:0000377,RNA splicing, via transesterification reactions with bulged adenosine as nucleophile; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006397,mRNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016071,mRNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:0030532,small nuclear ribonucleoprotein complex; GO:0097525,spliceosomal snRNP complex; GO:0120114,Sm-like protein family complex; GO:1990904,ribonucleoprotein complex; GO:0005681,spliceosomal complex; GO:0005684,U2-type spliceosomal complex; GO:0071010,prespliceosome","PF01846.22:FF domain","--","--","--"]
["MS01G05190",3.8954,2.8423,3.2536,0.7261,0.4052,0.8432,0.6997,0.1247,0.588,2.2905,4.7579,2.5368,1.2411,2.1497,1.2421,44,32,36,6,4,8,6,1,6,21,46,29,11,19,11,0.113539725,0.779587131,0.837486524,false,-0.819260101,0.065199672,0.100721899,false,-2.139911954,"7.45351E-05",0.00021611,"down",-2.519698693,"4.163E-05",0.000122842,"down",-2.625822812,0.000104274,0.000596097,"down","NA","NA","NA","NA","NA","NA","NA","NA",-2.240122166,0.000204649,0.001658399,"down","NA","NA","NA","NA","chr_001",4575648,4576130,"-","MS01G05190","--","--","--","hypothetical protein DVH24_012584 [Malus domestica]","--","A0A498HQ76_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72900.1};","--","--","--","--","--","--"]
["MS01G05200",73.1181,65.8581,73.2263,14.5344,39.322,11.9242,16.5421,35.2721,19.0177,61.9836,30.3347,33.801,47.6205,28.7509,49.7261,949,852,931,138,446,130,163,325,223,653,337,444,485,292,506,-0.547408582,0.062949468,0.107639147,false,-0.456289684,0.041059271,0.066911321,false,-1.447815902,0.000706268,0.001709152,"down",-1.293635178,"9.92267E-06","3.23542E-05","down",-0.731337353,0.061495205,0.135182625,false,-0.821977272,0.014873782,0.05763929,false,0.14751438,0.768532467,0.943225625,false,-0.87765677,0.075098364,0.187132835,false,-0.960406508,0.035227671,0.169280358,false,"chr_001",4582068,4582850,"+","MS01G05200","--","--","--","hypothetical protein DVH24_012582 [Malus domestica]","PSK_ASPOF RecName: Full=Phytosulfokines; Contains: RecName: Full=Phytosulfokine-alpha; Short=PSK-alpha; Short=Phytosulfokine-a; Contains: RecName: Full=Phytosulfokine-beta; Short=PSK-beta; Short=Phytosulfokine-b; Flags: Precursor;","A0A498HN04_MALDO RecName: Full=Phytosulfokine {ECO:0000256|RuleBase:RU368031}; Contains: RecName: Full=Phytosulfokine-alpha {ECO:0000256|RuleBase:RU368031}; Short=PSK-alpha {ECO:0000256|RuleBase:RU368031}; Short=Phytosulfokine-a {ECO:0000256|RuleBase:RU368031}; Contains: RecName: Full=Phytosulfokine-beta {ECO:0000256|RuleBase:RU368031}; Short=PSK-beta {ECO:0000256|RuleBase:RU368031}; Short=Phytosulfokine-b {ECO:0000256|RuleBase:RU368031};","--","GO:0005576,extracellular region; GO:0008083,growth factor activity; GO:0030154,cell differentiation; GO:0008283,cell population proliferation; GO:0003674,molecular_function; GO:0005102,signaling receptor binding; GO:0005488,binding; GO:0005515,protein binding; GO:0030545,signaling receptor regulator activity; GO:0030546,signaling receptor activator activity; GO:0048018,receptor ligand activity; GO:0098772,molecular function regulator activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF06404.15:Phytosulfokine precursor protein (PSK)","--","--","--"]
["MS01G05240",3.5039,4.7395,5.7302,1.0485,1.2168,1.4942,1.4006,1.8171,1.7366,2.6201,2.9531,2.0497,2.3326,1.7599,1.9566,201,271,322,44,61,72,61,74,90,122,145,119,105,79,88,-0.686860051,0.006086844,0.01415426,false,-0.908951342,0.00023364,0.000620039,false,-1.675931603,"6.33052E-10","3.91367E-09","down",-1.209794243,"2.16894E-06","7.79393E-06","down",-0.510875367,0.049987587,0.114632067,false,-0.284706071,0.272971525,0.466150637,false,0.464311948,0.098031013,0.526163177,false,-0.973289042,0.000465573,0.003307793,false,-0.740308123,0.006944261,0.055550081,false,"chr_001",4608938,4611390,"-","MS01G05240","--","--","--","LOW QUALITY PROTEIN: U-box domain-containing protein 30-like [Malus domestica]","PUB30_ARATH RecName: Full=U-box domain-containing protein 30; EC=2.3.2.27; AltName: Full=Plant U-box protein 30; AltName: Full=RING-type E3 ubiquitin transferase PUB30 {ECO:0000305};","A0A5N5H057_9ROSA RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483}; EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};","--","GO:0061630,ubiquitin protein ligase activity; GO:0071472,cellular response to salt stress; GO:1901001,negative regulation of response to salt stress; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004842,ubiquitin-protein transferase activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0061659,ubiquitin-like protein ligase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009651,response to salt stress; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0062197,cellular response to chemical stress; GO:0070887,cellular response to chemical stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071470,cellular response to osmotic stress; GO:0104004,cellular response to environmental stimulus; GO:0047484,regulation of response to osmotic stress; GO:0048519,negative regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:1901000,regulation of response to salt stress","PF04564.18:U-box domain","--","--","--"]
["MS01G05260",2.3562,2.9094,2.1807,1.2034,0.5481,1.2176,1.1596,0.5836,1.6049,2.2808,2.057,2.2641,1.7653,1.2408,1.3706,182,224,165,68,37,79,68,32,112,143,136,177,107,75,83,0.01341528,0.949000463,0.963774578,false,-0.473165407,0.053169978,0.084136995,false,-1.128868558,0.000623722,0.0015243,"down",-0.877108109,0.010556893,0.019980387,false,-0.875356956,0.011544424,0.034617429,false,-0.386292534,0.297252101,0.492806424,false,0.250535103,0.5705939,0.881834657,false,-1.12650762,0.000478059,0.003382517,"down",-0.632135539,0.072166181,0.266747854,false,"chr_001",4619463,4623475,"-","MS01G05260","--","K22389 phospholipase A1 [EC:3.1.1.32] | (RefSeq) LOW QUALITY PROTEIN: lecithin-cholesterol acyltransferase-like 4 (A)","ko00564: Glycerophospholipid metabolism; ko00592: alpha-Linolenic acid metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","hypothetical protein DVH24_012576 [Malus domestica]","LCAT1_ARATH RecName: Full=Lecithin-cholesterol acyltransferase-like 1; EC=2.3.1.-;","A0A498HSE4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72892.1};","Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase","GO:0016021,integral component of membrane; GO:0000325,plant-type vacuole; GO:0008374,O-acyltransferase activity; GO:0006629,lipid metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF02450.18:Lecithin:cholesterol acyltransferase","--","--","--"]
["MS01G05270",23.0045,24.6067,24.3819,85.7382,87.1022,61.0563,129.359,134.1443,111.5877,80.1472,67.0715,80.6919,122.7398,85.1257,89.0614,680,725,706,1854,2250,1516,2903,2815,2980,1923,1697,2414,2847,1969,2064,1.853465429,"1.29899E-35","9.11795E-34","up",2.341047387,"9.07333E-37","3.95862E-35","up",1.923368461,"1.70487E-20","2.98012E-19","up",2.669036593,"1.49794E-67","1.86459E-65","up",0.828545503,"1.50589E-06","1.34898E-05",false,0.342843473,0.091659615,0.22212948,false,0.741727147,0.000974399,0.057414602,false,0.08924834,0.687784047,0.820203569,false,-0.390545447,0.109884966,0.341967783,false,"chr_001",4627906,4629169,"+","MS01G05270","--","--","--","uncharacterized protein LOC103455873 [Malus domestica]","--","A0A498HUQ0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72891.1};","--","--","--","--","--","--"]
["MS01G05330",2.7051,3.027,2.1242,0,0.1191,0.4954,0,0,0.2303,1.0254,4.1328,2.3644,0.3978,0.2659,0.6635,26,29,20,0,1,4,0,0,2,8,34,23,3,2,5,0.105103564,0.845455581,0.888796082,false,-2.276681028,0.00078934,0.001897975,"down",-3.437519919,0.000105061,0.000296479,"down",-4.658521688,"8.72065E-05",0.000243651,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",4666424,4666834,"-","MS01G05330","--","--","--","uncharacterized protein LOC103455878 isoform X2 [Malus domestica]","SOFL5_ARATH RecName: Full=Protein SOB FIVE-LIKE 5 {ECO:0000303|PubMed:29467189}; Short=AtSOFL5 {ECO:0000303|PubMed:29467189};","A0A5N5H8N6_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2619514.1};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0009691,cytokinin biosynthetic process; GO:0009690,cytokinin metabolic process; GO:0009736,cytokinin-activated signaling pathway; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009308,amine metabolic process; GO:0009987,cellular process; GO:0010817,regulation of hormone levels; GO:0034754,cellular hormone metabolic process; GO:0042445,hormone metabolic process; GO:0042446,hormone biosynthetic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009735,response to cytokinin; GO:0009755,hormone-mediated signaling pathway; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071368,cellular response to cytokinin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","--","--","--","--"]
["MS01G05350",2.1952,2.0203,2.3151,4.2904,3.3839,4.3197,4.2775,3.8077,3.956,2.8609,2.6282,3.2087,3.3986,3.7559,3.4479,121,111,125,173,163,200,179,149,197,128,124,179,147,162,149,0.603699899,0.003118009,0.007801226,false,0.991883013,"1.63789E-07","7.12705E-07",false,1.087667844,"6.52996E-08","3.04813E-07","up",1.166803997,"2.1461E-09","1.14338E-08","up",0.576241949,0.003607572,0.013072266,false,0.189714088,0.308445314,0.504438695,false,0.077567956,0.68766871,0.919438379,false,0.501775474,0.015249841,0.056031225,false,0.120489089,0.52946314,0.778804499,false,"chr_001",4683999,4687106,"-","MS01G05350","--","--","--","hypothetical protein DVH24_012569 [Malus domestica]","--","A0A498HTJ0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72885.1};","--","--","--","--","--","--"]
["MS01G05360",3.8588,3.5553,4.1,6.9434,6.2629,9.0939,8.3501,7.4876,7.7142,3.4927,5.5202,3.307,4.3655,4.0758,3.2142,98,90,102,129,139,194,161,135,177,72,120,85,87,81,64,0.276358417,0.303880615,0.400999198,false,0.31254634,0.199606448,0.267043013,false,1.163034842,"2.35932E-07","1.02006E-06","up",1.316600686,"1.28327E-10","7.86515E-10","up",1.051519703,"5.41011E-05",0.000333433,"up",1.01931805,"9.39527E-06",0.000128077,"up",0.151886901,0.474371883,0.844473088,false,0.90032147,0.00137573,0.008119094,false,0.875502312,0.000432375,0.007037329,false,"chr_001",4692695,4693780,"+","MS01G05360","--","--","--","uncharacterized protein LOC114819148 [Malus domestica]","--","A0A498HVF9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72883.1};","WD40 repeat protein","--","--","--","--","--"]
["MS01G05370",36.9075,33.1123,33.6928,45.7265,41.8507,31.5929,59.1884,56.4643,60.0433,8.0361,9.6398,7.7672,15.4884,13.4657,10.8087,662,592,592,600,656,476,806,719,973,117,148,141,218,189,152,-1.845253925,"3.82503E-29","1.81726E-27","down",-1.088958826,"7.97997E-09","4.1272E-08","down",0.420863586,0.04489763,0.072577923,false,1.042827415,"6.89943E-15","6.44048E-14","up",2.900559309,"2.38384E-75","3.76196E-72","up",2.147132756,"3.41105E-31","1.74804E-28","up",0.619398658,0.002849822,0.103132158,false,2.282307212,"2.31075E-22","5.24762E-20","up",1.535993311,"3.91115E-10","5.39349E-08","up","chr_001",4693654,4695873,"-","MS01G05370","--","K03937 NADH dehydrogenase (ubiquinone) Fe-S protein 4 | (RefSeq) NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like (A)","ko00190: Oxidative phosphorylation; ko01100: Metabolic pathways","hypothetical protein DVH24_012566 [Malus domestica]","NDUS4_ARATH RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial; AltName: Full=Protein FROSTBITE1; Flags: Precursor;","A0A498HSD4_MALDO RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial {ECO:0000256|RuleBase:RU367010};","NADH:ubiquinone oxidoreductase, NDUFS4/18 kDa subunit","GO:0005747,mitochondrial respiratory chain complex I; GO:0005739,mitochondrion; GO:0009536,plastid; GO:0050897,cobalt ion binding; GO:0008137,NADH dehydrogenase (ubiquinone) activity; GO:0009631,cold acclimation; GO:0006970,response to osmotic stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0003954,NADH dehydrogenase activity; GO:0003955,NAD(P)H dehydrogenase (quinone) activity; GO:0005215,transporter activity; GO:0009055,electron transfer activity; GO:0015399,primary active transmembrane transporter activity; GO:0015453,oxidoreduction-driven active transmembrane transporter activity; GO:0016491,oxidoreductase activity; GO:0016651,oxidoreductase activity, acting on NAD(P)H; GO:0016655,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0050136,NADH dehydrogenase (quinone) activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009266,response to temperature stimulus; GO:0009409,response to cold; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005740,mitochondrial envelope; GO:0005743,mitochondrial inner membrane; GO:0005746,mitochondrial respirasome; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019866,organelle inner membrane; GO:0030964,NADH dehydrogenase complex; GO:0031090,organelle membrane; GO:0031224,intrinsic component of membrane; GO:0031966,mitochondrial membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0045271,respiratory chain complex I; GO:0070469,respirasome; GO:0098796,membrane protein complex; GO:0098798,mitochondrial protein-containing complex; GO:0098800,inner mitochondrial membrane protein complex; GO:0098803,respiratory chain complex; GO:0110165,cellular anatomical entity; GO:1902494,catalytic complex; GO:1902495,transmembrane transporter complex; GO:1990204,oxidoreductase complex; GO:1990351,transporter complex","PF04800.15:NADH dehydrogenase ubiquinone Fe-S protein 4","--","--","--"]
["MS01G05380",0.8675,1.0681,0.3623,0.0539,0.0226,0.0469,0.026,0,0.0436,0,0.0691,0,0,0,0.0251,44,54,18,2,1,2,1,0,2,0,3,0,0,0,1,-4.935417794,"2.68632E-06","1.29835E-05","down",-6.12538609,"3.41899E-06","1.2326E-05","down",-4.037482224,"3.47716E-06","1.2646E-05","down",-4.698494805,"5.4351E-06","1.84183E-05","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",4699284,4702470,"+","MS01G05380","--","K07195 exocyst complex component 7 | (RefSeq) LOW QUALITY PROTEIN: exocyst complex component EXO70A1 (A)","--","exocyst complex component EXO70A1-like [Malus domestica]","EX70I_MEDTR RecName: Full=Exocyst complex component EXO70I {ECO:0000303|PubMed:26234213}; Short=MtExo70I {ECO:0000303|PubMed:26234213}; AltName: Full=Exocyst subunit Exo70 family protein I {ECO:0000303|PubMed:26234213}; Flags: Precursor;","A0A498HUP2_MALDO RecName: Full=F-box domain-containing protein {ECO:0000259|PROSITE:PS50181};","Exocyst component protein and related proteins","GO:0000145,exocyst; GO:0085042,periarbuscular membrane; GO:0005886,plasma membrane; GO:0005546,phosphatidylinositol-4,5-bisphosphate binding; GO:0036377,arbuscular mycorrhizal association; GO:0006887,exocytosis; GO:0015031,protein transport; GO:0009609,response to symbiotic bacterium; GO:0009610,response to symbiotic fungus; GO:0003674,molecular_function; GO:0005488,binding; GO:0005543,phospholipid binding; GO:0008289,lipid binding; GO:0035091,phosphatidylinositol binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:1901981,phosphatidylinositol phosphate binding; GO:1902936,phosphatidylinositol bisphosphate binding; GO:0008150,biological_process; GO:0044403,biological process involved in symbiotic interaction; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0006810,transport; GO:0009987,cellular process; GO:0016192,vesicle-mediated transport; GO:0032940,secretion by cell; GO:0046903,secretion; GO:0051179,localization; GO:0051234,establishment of localization; GO:0140352,export from cell; GO:0008104,protein localization; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009608,response to symbiont; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0009620,response to fungus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005938,cell cortex; GO:0032991,protein-containing complex; GO:0071944,cell periphery; GO:0099023,vesicle tethering complex; GO:0110165,cellular anatomical entity; GO:0018995,host cellular component; GO:0033643,host cell part; GO:0033644,host cell membrane; GO:0043657,host cell; GO:0016020,membrane","PF03081.18:Exo70 exocyst complex subunit","--","--","--"]
["MS01G05400",8.0124,6.8349,5.555,0.82,0.8825,2.0914,0.6208,0.4225,0.5217,2.217,5.7066,3.4715,0.9828,0.8761,0.9291,187,159,127,14,18,41,11,7,11,42,114,82,18,16,17,-0.670985377,0.050211098,0.08864258,false,-2.582188576,"2.23588E-15","2.31561E-14","down",-2.225046727,"1.34761E-08","6.96872E-08","down",-3.424553874,"9.0302E-19","1.12972E-17","down",-2.741964889,"2.58852E-08","3.29138E-07","down","NA","NA","NA","NA","NA","NA","NA","NA",-1.544132683,0.001848605,0.010354959,"down","NA","NA","NA","NA","chr_001",4705592,4707413,"-","MS01G05400","--","K09377 cysteine and glycine-rich protein | (RefSeq) LIM domain-containing protein WLIM1-like (A)","--","hypothetical protein DVH24_012564, partial [Malus domestica]","WLIM1_ARATH RecName: Full=LIM domain-containing protein WLIM1 {ECO:0000305}; AltName: Full=Widely-expressed LIM protein 1 {ECO:0000303|PubMed:11085265}; Short=AtWLIM1;","A0A498HQ54_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72880.1}; Flags: Fragment;","Regulatory protein MLP and related LIM proteins","GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0005886,plasma membrane; GO:0051015,actin filament binding; GO:0046872,metal ion binding; GO:0003729,mRNA binding; GO:0051017,actin filament bundle assembly; GO:0003674,molecular_function; GO:0003779,actin binding; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0044877,protein-containing complex binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0007015,actin filament organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0030029,actin filament-based process; GO:0030036,actin cytoskeleton organization; GO:0044085,cellular component biogenesis; GO:0061572,actin filament bundle organization; GO:0071840,cellular component organization or biogenesis; GO:0097435,supramolecular fiber organization; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0016020,membrane; GO:0071944,cell periphery","PF00412.25:LIM domain","LIM","TF","LIM"]
["MS01G05410",8.0195,8.0172,7.7817,3.0215,3.1778,4.0145,3.5459,3.7921,4.4853,6.3539,6.1247,6.1599,5.6696,4.3456,5.6746,283,282,269,78,98,119,95,95,143,182,185,220,157,120,157,-0.167236099,0.293738687,0.389861753,false,-0.309218513,0.102119892,0.149433502,false,-1.008810831,"2.3669E-07","1.02279E-06","down",-0.72796828,"9.28219E-05",0.000258104,false,-0.54746628,0.005501209,0.018685562,false,-0.402983751,0.074827117,0.191726471,false,0.279731243,0.229359331,0.686522349,false,-0.824913079,"7.95711E-05",0.000750676,false,-0.674891715,0.004209337,0.038672322,false,"chr_001",4709619,4712893,"+","MS01G05410","--","K24104 GPN-loop GTPase | (RefSeq) GPN-loop GTPase QQT1-like (A)","--","hypothetical protein C1H46_003686 [Malus baccata]","QQT1_ARATH RecName: Full=GPN-loop GTPase QQT1 {ECO:0000305}; EC=3.6.5.- {ECO:0000305}; AltName: Full=Protein EMBRYO DEFECTIVE 1705 {ECO:0000303|PubMed:17419841}; AltName: Full=Protein QUATRE QUART 1 {ECO:0000303|PubMed:17419841};","A0A540NJI5_MALBA RecName: Full=GPN-loop GTPase 2 {ECO:0000256|RuleBase:RU365059};","Predicted GTPase","GO:0005874,microtubule; GO:0005634,nucleus; GO:0009524,phragmoplast; GO:0005819,spindle; GO:0005525,GTP binding; GO:0003924,GTPase activity; GO:0051301,cell division; GO:0009658,chloroplast organization; GO:0032502,developmental process; GO:0009793,embryo development ending in seed dormancy; GO:1902182,shoot apical meristem development; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0019001,guanyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0006996,organelle organization; GO:0009657,plastid organization; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0009888,tissue development; GO:0048507,meristem development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005856,cytoskeleton; GO:0015630,microtubule cytoskeleton; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0099080,supramolecular complex; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber; GO:0110165,cellular anatomical entity; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005737,cytoplasm","PF03029.20:Conserved hypothetical ATP binding protein","--","--","--"]
["MS01G05420",9.4122,6.7255,7.1545,9.6266,14.7222,7.6985,15.5639,47.3096,25.2957,39.2086,12.262,10.9057,16.1366,10.0813,13.128,278,198,207,208,380,191,349,992,675,940,310,326,374,233,304,1.635740756,0.000418988,0.001303593,"up",1.050194957,"1.62281E-05","5.25466E-05","up",0.687975151,0.028215316,0.048161686,false,2.208144311,"3.07518E-09","1.60475E-08","up",0.588393253,0.432369983,0.583463265,false,1.173137241,0.001806538,0.010783503,"up",1.516924677,0.00040034,0.035383902,"up",-0.925672538,0.068147101,0.174357075,false,-0.333913428,0.297829967,0.590360259,false,"chr_001",4715188,4716450,"+","MS01G05420","--","--","--","uncharacterized protein LOC126601628 [Malus sylvestris]","--","A0A498HMY4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72878.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G05450",1.2759,1.6,1.567,0.3543,0.4334,0.2136,0.3939,0.2808,0.2869,0.2456,0.4658,0.2955,0.3811,0.3057,0.3814,64,80,77,13,19,9,15,10,13,10,20,15,15,12,15,-1.961780505,"1.45972E-07","8.67058E-07","down",-1.762144215,"1.34772E-06","5.16513E-06","down",-1.925098629,"2.043E-06","7.68538E-06","down",-1.927563555,"5.9255E-07","2.30647E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",4737990,4740665,"-","MS01G05450","--","K21843 tetratricopeptide repeat protein 7 | (RefSeq) protein NPGR1 (A)","--","hypothetical protein DVH24_012552 [Malus domestica]","NPGR1_ARATH RecName: Full=Protein NPGR1 {ECO:0000303|PubMed:12928497}; AltName: Full=NO POLLEN GERMINATION RELATED 1 {ECO:0000303|PubMed:12928497};","A0A498HMX4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72868.1};","Predicted calmodulin-binding protein","GO:0031234,extrinsic component of cytoplasmic side of plasma membrane; GO:0005886,plasma membrane; GO:0005516,calmodulin binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0005575,cellular_component; GO:0009898,cytoplasmic side of plasma membrane; GO:0016020,membrane; GO:0019897,extrinsic component of plasma membrane; GO:0019898,extrinsic component of membrane; GO:0071944,cell periphery; GO:0098552,side of membrane; GO:0098562,cytoplasmic side of membrane; GO:0110165,cellular anatomical entity","PF07719.20:Tetratricopeptide repeat","--","--","--"]
["MS01G05460",28.2949,30.9482,35.0379,9.4999,7.8713,13.5921,8.033,5.2942,11.0675,16.3373,17.8953,20.6001,8.766,17.0374,10.6731,399,435,484,98,97,161,86,53,141,187,216,294,97,188,118,-0.592606089,0.000367275,0.001157813,false,-1.079174719,"1.6469E-05","5.32739E-05","down",-1.399073552,"8.40123E-10","5.12365E-09","down",-1.666913575,"7.9419E-11","4.98043E-10","down",-1.059822965,0.000151005,0.000830805,"down",-0.575014988,0.096039289,0.229527183,false,-0.269591972,0.412122936,0.811764435,false,-0.788648743,0.001153194,0.007011291,false,-0.296640137,0.352839873,0.641091905,false,"chr_001",4748723,4753463,"+","MS01G05460","--","K13459 disease resistance protein RPS2 | (RefSeq) disease resistance protein At4g27190-like (A)","ko04626: Plant-pathogen interaction","disease resistance protein At4g27190-like [Malus domestica]","--","A0A498HTQ9_MALDO RecName: Full=NB-ARC domain-containing protein {ECO:0000259|Pfam:PF00931};","--","GO:0043531,ADP binding; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding","PF06008.17:Laminin Domain I","--","--","--"]
["MS01G05470",8.9252,8.9383,10.1363,18.9762,16.7241,20.0365,20.5732,16.6805,18.188,16.8667,18.0429,21.9367,20.4732,20.8972,19.5764,560,559,623,871,917,1056,980,743,1031,859,969,1393,1008,1026,963,1.209022106,"8.58423E-16","1.38695E-14","up",1.416170878,"1.01401E-30","3.0941E-29","up",1.206250771,"1.08837E-19","1.78514E-18","up",1.271209427,"6.87822E-17","7.49825E-16","up",0.074926713,0.654002869,0.77012003,false,-0.130462776,0.371640576,0.56768928,false,0.062338859,0.679137464,0.916685986,false,0.015049618,0.921865079,0.960126132,false,-0.184705591,0.144022793,0.398665482,false,"chr_001",4754910,4767722,"+","MS01G05470","--","K10570 DNA excision repair protein ERCC-8 | (RefSeq) WD repeat-containing protein ATCSA-1-like (A)","ko03420: Nucleotide excision repair; ko04120: Ubiquitin mediated proteolysis","WD repeat-containing protein ATCSA-1-like [Malus domestica]","ACSA1_ARATH RecName: Full=WD repeat-containing protein ATCSA-1 {ECO:0000305}; AltName: Full=Cockayne syndrome WD repeat protein CSA homolog {ECO:0000305};","A0A5N5GV61_9ROSA SubName: Full=DNA excision repair protein ERCC-8-like {ECO:0000313|EMBL:KAB2619495.1};","Transcription-coupled repair protein CSA, contains WD40 domain","GO:0031464,Cul4A-RING E3 ubiquitin ligase complex; GO:0000109,nucleotide-excision repair complex; GO:0005634,nucleus; GO:0006281,DNA repair; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0000209,protein polyubiquitination; GO:0010224,response to UV-B; GO:0006283,transcription-coupled nucleotide-excision repair; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0010498,proteasomal protein catabolic process; GO:0019538,protein metabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044248,cellular catabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0016567,protein ubiquitination; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:0070647,protein modification by small protein conjugation or removal; GO:0009314,response to radiation; GO:0009411,response to UV; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0006289,nucleotide-excision repair; GO:0000151,ubiquitin ligase complex; GO:0005575,cellular_component; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0032991,protein-containing complex; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex","PF00400.35:WD domain, G-beta repeat","--","--","--"]
["MS01G05480",0.2015,0.3539,0.3601,1.102,0.8841,0.7398,1.1725,1.8217,0.5577,0.538,0.883,0.5974,0.7063,0.8585,0.3856,12,21,21,48,46,37,53,77,30,26,45,36,33,40,18,1.322548995,0.002124344,0.005538288,"up",1.388845898,0.003374811,0.007142065,"up",1.793031625,"1.76082E-05","5.68172E-05","up",2.253983317,"1.42457E-05","4.5405E-05","up",0.939300487,0.055141868,0.1240976,false,0.876010295,0.084644375,0.209735647,false,0.454092324,0.34212759,0.77338392,false,0.485570939,0.195996936,0.367245216,false,0.43088875,0.296986591,0.589591343,false,"chr_001",4766674,4769219,"-","MS01G05480","--","K22768 methyl-CpG-binding domain-containing protein 9 [EC:2.3.1.48] | (RefSeq) LOW QUALITY PROTEIN: methyl-CpG-binding domain-containing protein 9 (A)","--","increased DNA methylation 1-like [Malus sylvestris]","IDM1_ARATH RecName: Full=Increased DNA methylation 1 {ECO:0000303|PubMed:22700931}; AltName: Full=Histone H3 acetyltransferase IDM1 {ECO:0000305}; EC=2.3.1.- {ECO:0000255|PROSITE-ProRule:PRU00532}; AltName: Full=Protein ROS4 {ECO:0000303|PubMed:22733760}; AltName: Full=Repressor of silencing 4 {ECO:0000303|PubMed:22733760};","A0A498HN35_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72866.1};","--","GO:0005634,nucleus; GO:0009506,plasmodesma; GO:0010385,double-stranded methylated DNA binding; GO:0004402,histone acetyltransferase activity; GO:0042393,histone binding; GO:0046872,metal ion binding; GO:0080188,gene silencing by RNA-directed DNA methylation; GO:0044154,histone H3-K14 acetylation; GO:0043971,histone H3-K18 acetylation; GO:0043972,histone H3-K23 acetylation; GO:0044030,regulation of DNA methylation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0008080,N-acetyltransferase activity; GO:0016407,acetyltransferase activity; GO:0016410,N-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0034212,peptide N-acetyltransferase activity; GO:0061733,peptide-lysine-N-acetyltransferase activity; GO:0140096,catalytic activity, acting on a protein; GO:0005515,protein binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006325,chromatin organization; GO:0006338,chromatin remodeling; GO:0006346,DNA methylation-dependent heterochromatin formation; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009892,negative regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010605,negative regulation of macromolecule metabolic process; GO:0010629,negative regulation of gene expression; GO:0016043,cellular component organization; GO:0019222,regulation of metabolic process; GO:0031047,gene silencing by RNA; GO:0031048,small non-coding RNA-dependent heterochromatin formation; GO:0031507,heterochromatin formation; GO:0040029,epigenetic regulation of gene expression; GO:0043170,macromolecule metabolic process; GO:0045814,negative regulation of gene expression, epigenetic; GO:0048519,negative regulation of biological process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0070828,heterochromatin organization; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0140718,facultative heterochromatin formation; GO:0006473,protein acetylation; GO:0006475,internal protein amino acid acetylation; GO:0006807,nitrogen compound metabolic process; GO:0016570,histone modification; GO:0016573,histone acetylation; GO:0018193,peptidyl-amino acid modification; GO:0018205,peptidyl-lysine modification; GO:0018393,internal peptidyl-lysine acetylation; GO:0018394,peptidyl-lysine acetylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:0043543,protein acylation; GO:0043966,histone H3 acetylation; GO:0044238,primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006304,DNA modification; GO:0006305,DNA alkylation; GO:0006306,DNA methylation; GO:0006725,cellular aromatic compound metabolic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0032259,methylation; GO:0034641,cellular nitrogen compound metabolic process; GO:0043414,macromolecule methylation; GO:0044237,cellular metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044728,DNA methylation or demethylation; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051052,regulation of DNA metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF16135.8:Tify domain binding domain","PHD","TR","PHD"]
["MS01G05500",4.4863,4.3869,5.2754,0.621,0.5848,0.6761,1.2716,1.2799,1.4457,2.6586,2.9192,1.9078,1.0132,0.6531,1.1589,79,77,91,8,9,10,17,16,23,38,44,34,14,9,16,-0.738276284,0.012529819,0.026739992,false,-2.029511751,"4.4365E-08","2.08997E-07","down",-2.695657978,"2.11316E-11","1.55837E-10","down",-1.537865183,"3.71015E-06","1.28615E-05","down",-0.790685912,0.049543318,0.113787798,false,"NA","NA","NA","NA","NA","NA","NA","NA",-1.945485191,"5.39522E-05",0.000537949,"down","NA","NA","NA","NA","chr_001",4773359,4775309,"-","MS01G05500","--","K15040 voltage-dependent anion channel protein 2 | (RefSeq) mitochondrial outer membrane protein porin 2-like (A)","--","mitochondrial outer membrane protein porin 2-like [Malus domestica]","VDAC2_ARATH RecName: Full=Mitochondrial outer membrane protein porin 2; AltName: Full=Voltage-dependent anion-selective channel protein 2; Short=AtVDAC2; Short=VDAC-2;","A0A498HRF0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72864.1};","Porin/voltage-dependent anion-selective channel protein","GO:0005741,mitochondrial outer membrane; GO:0046930,pore complex; GO:0015288,porin activity; GO:0008308,voltage-gated anion channel activity; GO:0040008,regulation of growth; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015267,channel activity; GO:0022803,passive transmembrane transporter activity; GO:0022829,wide pore channel activity; GO:0022857,transmembrane transporter activity; GO:0005216,ion channel activity; GO:0005244,voltage-gated ion channel activity; GO:0005253,anion channel activity; GO:0008509,anion transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015103,inorganic anion transmembrane transporter activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022832,voltage-gated channel activity; GO:0022836,gated channel activity; GO:0008150,biological_process; GO:0040007,growth; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005740,mitochondrial envelope; GO:0016020,membrane; GO:0019867,outer membrane; GO:0031090,organelle membrane; GO:0031966,mitochondrial membrane; GO:0031967,organelle envelope; GO:0031968,organelle outer membrane; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0016021,integral component of membrane; GO:0031224,intrinsic component of membrane; GO:0032991,protein-containing complex; GO:0098796,membrane protein complex","PF01459.25:Eukaryotic porin","--","--","--"]
["MS01G05520",47.5507,40.7789,72.2253,112.7837,102.8108,137.6528,106.914,93.6582,108.6035,157.9672,247.8271,191.2523,218.3308,238.0599,197.7376,1529,1307,2275,2653,2889,3718,2610,2138,3155,4123,6821,6224,5509,5990,4985,2.07900877,"2.80553E-18","5.72161E-17","up",2.325069952,"4.409E-28","1.16172E-26","up",1.352364608,"5.5212E-09","3.01696E-08","up",1.234191273,"1.37675E-08","6.64151E-08","up",-0.834789175,"4.33657E-06","3.51856E-05",false,-1.076472724,"6.59365E-15","5.96295E-13","down",-0.120633611,0.40183699,0.80718654,false,-0.711989231,0.000228953,0.00182257,false,-0.947411786,"3.20873E-10","4.63226E-08",false,"chr_001",4799390,4800861,"-","MS01G05520","--","--","--","hypothetical protein C1H46_003673 [Malus baccata]","RMS3_PEA RecName: Full=Strigolactone esterase RMS3 {ECO:0000305}; EC=3.1.-.- {ECO:0000305}; AltName: Full=Protein DWARF 14 homolog {ECO:0000305}; Short=PsD14 {ECO:0000303|PubMed:27479744}; AltName: Full=Protein RAMOSUS 3 {ECO:0000303|PubMed:27479744};","A0A540NJU4_MALBA RecName: Full=AB hydrolase-1 domain-containing protein {ECO:0000259|Pfam:PF12697};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0016787,hydrolase activity; GO:0010223,secondary shoot formation; GO:1901601,strigolactone biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0001763,morphogenesis of a branching structure; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009653,anatomical structure morphogenesis; GO:0010016,shoot system morphogenesis; GO:0010346,shoot axis formation; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048646,anatomical structure formation involved in morphogenesis; GO:0048731,system development; GO:0048856,anatomical structure development; GO:1905393,plant organ formation; GO:0006629,lipid metabolic process; GO:0006714,sesquiterpenoid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016106,sesquiterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:1901334,lactone metabolic process; GO:1901336,lactone biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901600,strigolactone metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF12697.10:Alpha/beta hydrolase family","--","--","--"]
["MS01G05600",81.0546,66.4625,62.4632,12.3167,23.5787,12.7488,15.7592,22.9908,17.0032,29.5707,30.8893,23.9716,24.235,17.602,25.7635,2195,1794,1657,244,558,290,324,442,416,650,716,657,515,373,547,-1.129679768,"4.38541E-10","3.76505E-09","down",-1.344161634,"1.65326E-11","1.16406E-10","down",-1.882647249,"4.98935E-10","3.13331E-09","down",-1.629811402,"3.81215E-14","3.3278E-13","down",-0.487914422,0.027779962,0.071432752,false,-0.270230848,0.250349465,0.441601941,false,0.24811062,0.457763484,0.834233706,false,-0.734424895,0.018856489,0.065986089,false,-0.509860934,0.11154391,0.345178418,false,"chr_001",4885781,4889342,"-","MS01G05600","--","K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] | (RefSeq) adenine phosphoribosyltransferase 1-like (A)","ko00230: Purine metabolism; ko01100: Metabolic pathways; ko01232: Nucleotide metabolism","hypothetical protein DVH24_012540 [Malus domestica]","APT1_ARATH RecName: Full=Adenine phosphoribosyltransferase 1, chloroplastic; Short=APRT 1; Short=AtAPT1; EC=2.4.2.7; Flags: Precursor;","A0A498HN25_MALDO RecName: Full=Adenine phosphoribosyltransferase {ECO:0000256|ARBA:ARBA00011893}; EC=2.4.2.7 {ECO:0000256|ARBA:ARBA00011893};","Adenine phosphoribosyl transferases","GO:0009507,chloroplast; GO:0005829,cytosol; GO:0003999,adenine phosphoribosyltransferase activity; GO:0006168,adenine salvage; GO:0044209,AMP salvage; GO:0009690,cytokinin metabolic process; GO:0006166,purine ribonucleoside salvage; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016763,pentosyltransferase activity; GO:0106130,purine phosphoribosyltransferase activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006144,purine nucleobase metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009112,nucleobase metabolic process; GO:0009113,purine nucleobase biosynthetic process; GO:0009987,cellular process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043094,cellular metabolic compound salvage; GO:0043096,purine nucleobase salvage; GO:0043101,purine-containing compound salvage; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0046083,adenine metabolic process; GO:0046084,adenine biosynthetic process; GO:0046112,nucleobase biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0072521,purine-containing compound metabolic process; GO:0072522,purine-containing compound biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006163,purine nucleotide metabolic process; GO:0006164,purine nucleotide biosynthetic process; GO:0006167,AMP biosynthetic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0009117,nucleotide metabolic process; GO:0009123,nucleoside monophosphate metabolic process; GO:0009124,nucleoside monophosphate biosynthetic process; GO:0009126,purine nucleoside monophosphate metabolic process; GO:0009127,purine nucleoside monophosphate biosynthetic process; GO:0009150,purine ribonucleotide metabolic process; GO:0009152,purine ribonucleotide biosynthetic process; GO:0009156,ribonucleoside monophosphate biosynthetic process; GO:0009161,ribonucleoside monophosphate metabolic process; GO:0009165,nucleotide biosynthetic process; GO:0009167,purine ribonucleoside monophosphate metabolic process; GO:0009168,purine ribonucleoside monophosphate biosynthetic process; GO:0009259,ribonucleotide metabolic process; GO:0009260,ribonucleotide biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0019693,ribose phosphate metabolic process; GO:0032261,purine nucleotide salvage; GO:0043173,nucleotide salvage; GO:0046033,AMP metabolic process; GO:0046390,ribose phosphate biosynthetic process; GO:0090407,organophosphate biosynthetic process; GO:0106380,purine ribonucleotide salvage; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901293,nucleoside phosphate biosynthetic process; GO:0009308,amine metabolic process; GO:0010817,regulation of hormone levels; GO:0034754,cellular hormone metabolic process; GO:0042445,hormone metabolic process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0009116,nucleoside metabolic process; GO:0009119,ribonucleoside metabolic process; GO:0009163,nucleoside biosynthetic process; GO:0034404,nucleobase-containing small molecule biosynthetic process; GO:0042278,purine nucleoside metabolic process; GO:0042451,purine nucleoside biosynthetic process; GO:0042455,ribonucleoside biosynthetic process; GO:0043174,nucleoside salvage; GO:0044283,small molecule biosynthetic process; GO:0046128,purine ribonucleoside metabolic process; GO:0046129,purine ribonucleoside biosynthetic process; GO:1901657,glycosyl compound metabolic process; GO:1901659,glycosyl compound biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00156.30:Phosphoribosyl transferase domain","--","--","--"]
["MS01G05610",451.2558,396.3597,344.2667,522.9668,344.7125,355.9557,463.1387,936.1368,713.6708,523.3249,319.2059,146.1902,389.9826,231.6954,187.5888,12273,10745,9172,10405,8193,8132,9563,18075,17536,11553,7431,4024,8323,4931,4000,-0.067600094,0.861271353,0.900202658,false,-0.261142265,0.33734089,0.417586768,false,0.251677547,0.264161733,0.339020267,false,1.107687207,"2.4585E-05","7.52863E-05","up",1.18974025,0.005679138,0.019182115,"up",1.385470465,"2.33042E-05",0.000281861,"up",0.857706815,0.003954994,0.124293022,false,0.335647947,0.419187861,0.607457542,false,0.538303608,0.079826589,0.2834098,false,"chr_001",4895688,4896850,"+","MS01G05610","--","--","--","hypothetical protein DVH24_012539 [Malus domestica]","ZAT10_ARATH RecName: Full=Zinc finger protein ZAT10; AltName: Full=Salt-tolerance zinc finger;","A0A498HTG0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72855.1};","FOG: Zn-finger","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0043565,sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0071456,cellular response to hypoxia; GO:0035264,multicellular organism growth; GO:0045892,negative regulation of DNA-templated transcription; GO:0010117,photoprotection; GO:0015979,photosynthesis; GO:0009737,response to abscisic acid; GO:0010200,response to chitin; GO:0009409,response to cold; GO:0009644,response to high light intensity; GO:0006979,response to oxidative stress; GO:0009651,response to salt stress; GO:0009414,response to water deprivation; GO:0009611,response to wounding; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0040007,growth; GO:0048589,developmental growth; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0010243,response to organonitrogen compound; GO:1901698,response to nitrogen compound; GO:0009266,response to temperature stimulus; GO:0009642,response to light intensity; GO:0006970,response to osmotic stress; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:0010035,response to inorganic substance; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13912.9:C2H2-type zinc finger","C2H2","TF","C2H2"]
["MS01G05660",8.9049,11.8529,8.5505,2.2899,1.816,1.2596,1.9743,0.8694,0.8783,1.4121,2.4721,2.0908,1.6854,3.7182,1.9118,101,134,95,19,18,12,17,7,9,13,24,24,15,33,17,-2.109829868,"4.05561E-10","3.49715E-09","down",-1.714561882,"3.30373E-06","1.19323E-05","down",-2.240913803,"1.87336E-09","1.08623E-08","down",-2.701809266,"1.85744E-10","1.12109E-09","down",-0.570646507,0.32440885,0.476605006,false,"NA","NA","NA","NA","NA","NA","NA","NA",-0.105690021,0.836064052,0.911734096,false,-0.495222655,0.350540589,0.639047104,false,"chr_001",4948068,4948871,"-","MS01G05660","--","--","--","uncharacterized protein At2g23090-like [Malus domestica]","Y2309_ARATH RecName: Full=Uncharacterized protein At2g23090;","A0A540MWU9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE03265.1};","--","--","PF12907.10:Zinc-binding","--","--","--"]
["MS01G05690",5.0321,4.1478,2.7976,5.7162,1.595,2.475,3.672,3.6939,8.5771,1.3098,1.0764,0.8404,0.9032,1.9021,1.2656,213,175,116,177,59,88,118,111,328,45,39,36,30,63,42,-1.712823653,"2.94919E-07","1.66829E-06","down",-1.274458771,0.000246468,0.00065075,"down",-0.087061139,0.851770534,0.883047479,false,0.673622637,0.070124022,0.108294729,false,2.401234073,"1.66089E-09","2.59797E-08","up",1.967593223,"1.18512E-06","2.12545E-05","up",0.766477273,0.122921612,0.567311526,false,1.636093423,0.000880248,0.005640543,"up",1.208346875,0.014305844,0.092087639,false,"chr_001",4958535,4960932,"+","MS01G05690","--","K25898 CO(2)-response secreted protease | (RefSeq) CO(2)-response secreted protease-like (A)","--","subtilisin-like protease SBT1.7 [Malus domestica]","SBT17_ARATH RecName: Full=Subtilisin-like protease SBT1.7 {ECO:0000303|PubMed:16193095}; EC=3.4.21.- {ECO:0000305}; AltName: Full=Cucumisin-like serine protease; AltName: Full=Subtilase subfamily 1 member 7 {ECO:0000303|PubMed:16193095}; Short=AtSBT1.7 {ECO:0000303|PubMed:16193095}; AltName: Full=Subtilisin-like serine protease 1 {ECO:0000303|PubMed:12702015}; Short=At-SLP1 {ECO:0000303|PubMed:12702015}; Flags: Precursor;","A0A540NI67_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE10748.1};","--","GO:0048046,apoplast; GO:0005576,extracellular region; GO:0099503,secretory vesicle; GO:0004252,serine-type endopeptidase activity; GO:0080001,mucilage extrusion from seed coat; GO:0048359,mucilage metabolic process involved in seed coat development; GO:0006508,proteolysis; GO:0010214,seed coat development; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0016787,hydrolase activity; GO:0017171,serine hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009791,post-embryonic development; GO:0009845,seed germination; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0032504,multicellular organism reproduction; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048609,multicellular organismal reproductive process; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090351,seedling development; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010191,mucilage metabolic process; GO:0044237,cellular metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle","PF00082.25:Subtilase family","--","--","--"]
["MS01G05710",13.2651,11.5724,8.4109,2.0836,7.1654,4.2668,2.7131,6.6733,5.3806,13.0942,9.337,7.164,6.1948,6.1596,7.8292,322,280,200,37,152,87,50,115,118,258,194,176,118,117,149,0.022307062,0.940791876,0.957808197,false,-0.433440411,0.073784339,0.112338558,false,-1.073028271,0.012313217,0.022946973,"down",-0.894975929,0.009605385,0.018359153,false,-0.902759458,0.018307318,0.050750236,false,-0.444465895,0.184878841,0.361017856,false,0.174988129,0.726705043,0.930997448,false,-1.076366197,0.018198512,0.064207094,false,-0.609785591,0.148494984,0.40591558,false,"chr_001",4969436,4971282,"+","MS01G05710","--","--","--","uncharacterized protein LOC103455920 [Malus domestica]","SYP61_ARATH RecName: Full=Syntaxin-61 {ECO:0000303|PubMed:11739776}; Short=AtSYP61 {ECO:0000303|PubMed:11739776}; AltName: Full=Osmotic stress-sensitive mutant 1 {ECO:0000303|PubMed:12468724}; AltName: Full=Protein SYNTAXIN OF PLANTS 61 {ECO:0000303|PubMed:11739776};","A0A540NI72_MALBA RecName: Full=Syntaxin-6_N domain-containing protein {ECO:0000259|Pfam:PF09177};","--","GO:0012505,endomembrane system; GO:0016021,integral component of membrane; GO:0031201,SNARE complex; GO:0005802,trans-Golgi network; GO:0032588,trans-Golgi network membrane; GO:0005484,SNAP receptor activity; GO:0000149,SNARE binding; GO:0009738,abscisic acid-activated signaling pathway; GO:0006887,exocytosis; GO:0048193,Golgi vesicle transport; GO:0006886,intracellular protein transport; GO:0052324,plant-type cell wall cellulose biosynthetic process; GO:0048278,vesicle docking; GO:0006906,vesicle fusion; GO:0003674,molecular_function; GO:0030674,protein-macromolecule adaptor activity; GO:0060090,molecular adaptor activity; GO:0005488,binding; GO:0005515,protein binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006810,transport; GO:0016192,vesicle-mediated transport; GO:0032940,secretion by cell; GO:0046903,secretion; GO:0051179,localization; GO:0051234,establishment of localization; GO:0140352,export from cell; GO:0008104,protein localization; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0009664,plant-type cell wall organization; GO:0009832,plant-type cell wall biogenesis; GO:0010383,cell wall polysaccharide metabolic process; GO:0016043,cellular component organization; GO:0016051,carbohydrate biosynthetic process; GO:0030243,cellulose metabolic process; GO:0030244,cellulose biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034406,cell wall beta-glucan metabolic process; GO:0034410,cell wall beta-glucan biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0042546,cell wall biogenesis; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044038,cell wall macromolecule biosynthetic process; GO:0044042,glucan metabolic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0045229,external encapsulating structure organization; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0052541,plant-type cell wall cellulose metabolic process; GO:0070589,cellular component macromolecule biosynthetic process; GO:0070592,cell wall polysaccharide biosynthetic process; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:1901576,organic substance biosynthetic process; GO:0022406,membrane docking; GO:0051640,organelle localization; GO:0140056,organelle localization by membrane tethering; GO:0006996,organelle organization; GO:0016050,vesicle organization; GO:0048284,organelle fusion; GO:0061024,membrane organization; GO:0061025,membrane fusion; GO:0090174,organelle membrane fusion; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0032991,protein-containing complex; GO:0098796,membrane protein complex; GO:0005794,Golgi apparatus; GO:0031984,organelle subcompartment; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098791,Golgi apparatus subcompartment; GO:0031090,organelle membrane","PF09177.14:Syntaxin 6, N-terminal","--","--","--"]
["MS01G05720",67.9516,65.5029,64.9394,188.467,180.5857,175.8096,189.0925,187.4798,188.4369,115.4677,109.7964,120.5584,148.4751,149.8702,153.4414,1864,1791,1745,3782,4329,4051,3938,3651,4670,2571,2578,3347,3196,3217,3300,0.989592489,"2.45077E-17","4.60119E-16",false,1.479071403,"8.0929E-47","5.34765E-45","up",1.673367016,"1.06047E-41","6.80755E-40","up",1.793371041,"9.53603E-56","7.68827E-54","up",0.816940401,"2.66094E-12","6.31996E-11",false,0.329273788,0.001871083,0.011101732,false,0.117605382,0.356038796,0.782243699,false,0.701917232,"9.62552E-08","2.04981E-06",false,0.219838339,0.070121575,0.262350974,false,"chr_001",4978394,4979657,"+","MS01G05720","--","K22419 Delta4-3-oxosteroid 5beta-reductase [EC:1.3.1.3] | (RefSeq) 3-oxo-Delta(4,5)-steroid 5-beta-reductase-like (A)","--","3-oxo-Delta(4,5)-steroid 5-beta-reductase [Pyrus x bretschneideri]","CYC2_CAMAC RecName: Full=(S)-8-oxocitronellyl enol synthase CYC2 {ECO:0000305}; EC=1.3.1.122 {ECO:0000269|PubMed:27432874}; AltName: Full=Cyclase 2 {ECO:0000303|PubMed:27432874}; AltName: Full=Iridoid synthase {ECO:0000305}; Short=ISY {ECO:0000305};","A0A5N5GV32_9ROSA SubName: Full=3-oxo-Delta(4-5)-steroid 5-beta-reductase-like {ECO:0000313|EMBL:KAB2619469.1};","--","GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0043693,monoterpene biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0042214,terpene metabolic process; GO:0043692,monoterpene metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0046246,terpene biosynthetic process; GO:0071704,organic substance metabolic process; GO:0120251,hydrocarbon biosynthetic process; GO:0120252,hydrocarbon metabolic process; GO:1901576,organic substance biosynthetic process","PF01370.24:NAD dependent epimerase/dehydratase family","--","--","--"]
["MS01G05810",7.5065,7.3481,8.2581,2.5404,1.6262,2.5378,2.7358,2.0788,2.2385,3.2996,4.8532,3.3484,2.3451,3.12,3.2767,412,402,444,102,78,117,114,81,111,147,228,186,101,134,141,-0.825873286,"1.56065E-05","6.47916E-05",false,-1.111568952,"9.48966E-10","5.53289E-09","down",-1.579384693,"1.84261E-13","1.69814E-12","down",-1.428084487,"1.36597E-13","1.13134E-12","down",-0.590790374,0.018339067,0.050833288,false,-0.301117511,0.214671109,0.399523044,false,0.150273627,0.575137765,0.883519368,false,-0.738694332,0.006501732,0.028490993,false,-0.44319637,0.090361097,0.305815492,false,"chr_001",5050036,5053247,"-","MS01G05810","--","--","--","uncharacterized protein LOC103455924 [Malus domestica]","--","A0A498HN03_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72836.1};","--","--","PF04788.15:Protein of unknown function (DUF620)","--","--","--"]
["MS01G05820",2.2422,7.0698,3.4334,0.2189,2.0159,1.5253,0.4219,0.4512,1.2409,11.8385,12.7233,13.7673,7.1433,12.0754,6.9454,14,44,21,1,11,8,2,2,7,60,68,87,35,59,34,1.773652114,"3.34584E-05",0.000130923,"up",1.326896009,0.00606106,0.012120068,"up","NA","NA","NA","NA","NA","NA","NA","NA",-4.020114315,"3.8087E-13","1.00923E-11","down",-3.580288176,"1.09674E-08","3.12242E-07","down","NA","NA","NA","NA",-3.262030977,"3.05742E-10","1.13156E-08","down",-2.812202816,"3.01721E-06",0.000123715,"down","chr_001",5059885,5060462,"+","MS01G05820","--","--","--","peamaclein [Malus domestica]","PMLN_PRUPE RecName: Full=Peamaclein {ECO:0000303|PubMed:23278887}; AltName: Allergen=Pru p 7 {ECO:0000303|PubMed:23278887};","A0A498HTE5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72835.1};","--","--","PF02704.17:Gibberellin regulated protein","--","--","--"]
["MS01G05830",14.8477,14.4085,13.0489,29.7988,30.3972,27.8961,31.1313,28.3297,25.9365,22.2831,23.0077,25.9269,27.7456,21.2514,25.4114,1100,1064,947,1615,1968,1736,1751,1490,1736,1340,1459,1944,1613,1232,1476,0.936819534,"3.02544E-12","3.36742E-11",false,1.107523789,"5.61595E-12","4.16466E-11","up",1.274236474,"8.21252E-18","1.13935E-16","up",1.298305634,"4.47944E-16","4.58737E-15","up",0.374101539,0.013185807,0.038621988,false,0.205521887,0.236581113,0.426120095,false,0.020512181,0.900751484,0.976466147,false,0.355808734,0.01351679,0.050915754,false,0.192878346,0.262592807,0.552241838,false,"chr_001",5071829,5087893,"-","MS01G05830","--","K00924 kinase [EC:2.7.1.-] | (RefSeq) aspartic proteinase-like protein 2 (A)","--","hypothetical protein DVH24_012518 [Malus domestica]","ASP36_ARATH RecName: Full=Aspartic proteinase 36 {ECO:0000303|PubMed:27872247}; EC=3.4.23.- {ECO:0000269|PubMed:27872247}; Flags: Precursor;","A0A498HRB1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72834.1};","Aspartyl protease","GO:0031225,anchored component of membrane; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0090406,pollen tube; GO:0004190,aspartic-type endopeptidase activity; GO:0009555,pollen development; GO:0009846,pollen germination; GO:0009860,pollen tube growth; GO:0010183,pollen tube guidance; GO:0030163,protein catabolic process; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0000003,reproduction; GO:0009856,pollination; GO:0022414,reproductive process; GO:0044706,multi-multicellular organism process; GO:0000902,cell morphogenesis; GO:0000904,cell morphogenesis involved in differentiation; GO:0003006,developmental process involved in reproduction; GO:0009653,anatomical structure morphogenesis; GO:0009826,unidimensional cell growth; GO:0009932,cell tip growth; GO:0009987,cellular process; GO:0016049,cell growth; GO:0030154,cell differentiation; GO:0040007,growth; GO:0048468,cell development; GO:0048588,developmental cell growth; GO:0048589,developmental growth; GO:0048868,pollen tube development; GO:0048869,cellular developmental process; GO:0060560,developmental growth involved in morphogenesis; GO:0006935,chemotaxis; GO:0009605,response to external stimulus; GO:0040011,locomotion; GO:0042221,response to chemical; GO:0042330,taxis; GO:0050896,response to stimulus; GO:0050918,positive chemotaxis; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0071944,cell periphery; GO:0042995,cell projection; GO:0120025,plasma membrane bounded cell projection","PF00806.22:Pumilio-family RNA binding repeat","--","--","--"]
["MS01G05860",0.5207,0.653,1.2624,2.4912,3.2026,3.3318,2.1432,1.2835,2.0892,1.2028,0.6844,1.4148,0.9124,2.3289,2.1584,8,10,19,28,43,43,25,14,29,15,9,22,11,28,26,"NA","NA","NA","NA",1.442809551,0.011733631,0.021919945,"up",2.113740709,"7.25061E-06","2.49586E-05","up",1.471750024,0.006039163,0.012047658,"up",0.841353185,0.098870614,0.195824756,false,0.043614027,0.930091039,0.962831413,false,-0.644219948,0.102177166,0.532874734,false,1.488972581,0.000943403,0.005961793,"up",0.696384694,0.116262708,0.352982143,false,"chr_001",5098235,5099676,"+","MS01G05860","--","K13260 isoflavone/4'-methoxyisoflavone 2'-hydroxylase [EC:1.14.14.90 1.14.14.89] | (RefSeq) cytochrome P450 81E8-like (A)","ko00943: Isoflavonoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","hypothetical protein DVH24_012516 [Malus domestica]","CYQ32_CATRO RecName: Full=Cytochrome P450 81Q32 {ECO:0000303|PubMed:24710322}; Short=CrCYP81Q32 {ECO:0000303|PubMed:24710322}; EC=1.14.-.- {ECO:0000305};","A0A498HS85_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72832.1};","Cytochrome P450 CYP2 subfamily","GO:0016021,integral component of membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G05880",4.5537,4.3522,4.6486,9.5765,7.1224,6.4797,10.8248,10.9309,15.27,6.5727,5.4774,6.4961,8.7217,9.0217,6.0831,169,161,169,260,231,202,305,288,512,198,174,244,254,262,177,0.642607366,0.000633524,0.001883995,false,1.108283901,"2.35524E-07","1.00226E-06","up",0.990373914,"1.46754E-05","4.80796E-05",false,1.728863623,"1.75146E-19","2.30557E-18","up",1.100354359,"1.29589E-07","1.45326E-06","up",0.636406397,0.006239508,0.029268566,false,0.737109601,0.002348524,0.092851481,false,0.365792561,0.128037939,0.274536695,false,-0.092108853,0.721550896,0.886129718,false,"chr_001",5102065,5104283,"+","MS01G05880","--","K13260 isoflavone/4'-methoxyisoflavone 2'-hydroxylase [EC:1.14.14.90 1.14.14.89] | (RefSeq) cytochrome P450 81E8-like (A)","ko00943: Isoflavonoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","hypothetical protein C1H46_003636 [Malus baccata]","CYQ32_CATRO RecName: Full=Cytochrome P450 81Q32 {ECO:0000303|PubMed:24710322}; Short=CrCYP81Q32 {ECO:0000303|PubMed:24710322}; EC=1.14.-.- {ECO:0000305};","A0A540NJD5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE10733.1};","Cytochrome P450 CYP2 subfamily","GO:0016021,integral component of membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G05950",10.5657,9.1709,10.083,34.858,29.8592,34.3997,34.0573,29.2641,29.6181,21.4118,21.9138,22.1696,25.4465,28.9162,32.1919,445,385,416,1074,1099,1217,1089,875,1127,732,790,945,841,953,1063,1.322072917,"3.63609E-24","1.17818E-22","up",1.827788751,"9.50364E-36","3.95365E-34","up",1.94546127,"8.07526E-43","5.51674E-41","up",1.924990331,"4.62985E-35","1.54762E-33","up",0.615084686,"1.12087E-05","8.20606E-05",false,0.111476196,0.47389762,0.660763281,false,-0.02298462,0.876108893,0.971434613,false,0.640491588,"3.91764E-07","7.22325E-06",false,0.142276776,0.332687782,0.623407243,false,"chr_001",5168253,5170457,"-","MS01G05950","--","K13260 isoflavone/4'-methoxyisoflavone 2'-hydroxylase [EC:1.14.14.90 1.14.14.89] | (RefSeq) cytochrome P450 81E8-like (A)","ko00943: Isoflavonoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","hypothetical protein DVH24_012509 [Malus domestica]","CYQ32_CATRO RecName: Full=Cytochrome P450 81Q32 {ECO:0000303|PubMed:24710322}; Short=CrCYP81Q32 {ECO:0000303|PubMed:24710322}; EC=1.14.-.- {ECO:0000305};","A0A498HTD2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72825.1};","Cytochrome P450 CYP2 subfamily","GO:0016021,integral component of membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G05970",2.1999,1.2415,1.9651,0,0.7867,0.3274,0.4528,0.4842,0.1522,1.6939,0.5622,0.6114,0.1752,0.615,0.4384,32,18,28,0,10,4,5,5,2,20,7,9,2,7,5,-0.723175447,0.229572789,0.318517558,false,-1.849562692,0.004224826,0.008741151,"down",-2.015874545,0.014531678,0.026631425,"down",-2.05388171,0.002581406,0.005552514,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",5227101,5227722,"-","MS01G05970","--","--","--","hypothetical protein DVH24_012505 [Malus domestica]","--","A0A498HUI4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72821.1};","--","--","--","--","--","--"]
["MS01G05980",17.5188,21.2122,19.2495,8.8477,7.1596,7.3458,6.9908,9.0564,5.1582,11.1104,10.3848,9.3371,8.5782,7.8854,10.8973,406,490,437,150,145,143,123,149,108,209,206,219,156,143,198,-0.724327361,"2.99243E-05",0.000118221,false,-0.791690094,"2.57025E-05","8.06859E-05",false,-1.099122159,"7.93916E-09","4.23975E-08","down",-1.16454221,"5.03913E-06","1.71664E-05","down",-0.429486949,0.117904706,0.223608031,false,-0.35806231,0.200699983,0.381822415,false,-0.068352266,0.812233545,0.954413429,false,-0.358016685,0.090632191,0.21511505,false,-0.281643236,0.211478611,0.492606701,false,"chr_001",5236411,5237401,"+","MS01G05980","--","K14495 F-box protein GID2 | (RefSeq) F-box protein GID2-like (A)","ko04075: Plant hormone signal transduction","F-box protein GID2-like [Malus domestica]","GID2_ARATH RecName: Full=F-box protein GID2; AltName: Full=Protein SLEEPY 1;","A0A540NI42_MALBA RecName: Full=F-box domain-containing protein {ECO:0000259|PROSITE:PS50181};","--","GO:0005634,nucleus; GO:0019005,SCF ubiquitin ligase complex; GO:0009740,gibberellic acid mediated signaling pathway; GO:0016567,protein ubiquitination; GO:0031146,SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; GO:0010162,seed dormancy process; GO:0009845,seed germination; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009739,response to gibberellin; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010476,gibberellin mediated signaling pathway; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0010498,proteasomal protein catabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0010431,seed maturation; GO:0021700,developmental maturation; GO:0022414,reproductive process; GO:0022611,dormancy process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0032504,multicellular organism reproduction; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048609,multicellular organismal reproductive process; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0071695,anatomical structure maturation; GO:0090351,seedling development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0000151,ubiquitin ligase complex; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0032991,protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF00646.36:F-box domain","--","--","--"]
["MS01G06020",8.8439,6.2044,5.4464,0.3723,0.4033,0.2861,0.6964,0.6093,0.0887,1.1251,0.861,0.4274,0.1633,0.4504,1.5531,552,386,333,17,22,15,33,27,5,57,46,27,8,22,76,-2.905518205,"8.03907E-16","1.30529E-14","down",-2.967332812,0.000490383,0.00122604,"down",-4.056514011,"1.65654E-33","6.99884E-32","down",-3.592371291,"3.40685E-12","2.45945E-11","down",-0.678833427,0.331780964,0.484180327,false,-0.60422234,0.469562276,0.656637368,false,0.460738268,0.516524234,0.862301147,false,-1.136779343,0.024778973,0.081280413,false,-1.063035871,0.141521811,0.394598285,false,"chr_001",5251938,5254606,"+","MS01G06020","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) probable serine/threonine-protein kinase PBL7 isoform X2 (A)","ko04626: Plant-pathogen interaction","putative receptor protein kinase ZmPK1 [Malus domestica]","KPRO_MAIZE RecName: Full=Putative receptor protein kinase ZmPK1; EC=2.7.11.1; Flags: Precursor;","A0A540NI38_MALBA RecName: Full=Receptor-like serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}; EC=2.7.11.1 {ECO:0000256|PIRNR:PIRNR000641};","--","GO:0016021,integral component of membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0048544,recognition of pollen; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0008037,cell recognition; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G06030",2.1902,1.9847,1.4064,0.5795,0.3638,0.4416,0.7445,0.8708,0.3128,0.9792,0.7841,0.349,0.3376,0.2709,0.5632,124,112,78,24,18,21,32,35,16,45,38,20,15,12,25,-1.222178075,0.003262804,0.008129088,"down",-1.965550989,"2.96214E-07","1.24121E-06","down",-1.81044253,"6.10914E-07","2.48487E-06","down",-1.254765291,0.003278096,0.00690969,"down",-0.020640216,0.970826638,0.983288222,false,0.728995421,0.181150334,0.355782342,false,0.55359477,0.285353891,0.732518073,false,-0.572947845,0.268654713,0.454406324,false,0.181923524,0.712767559,0.88182613,false,"chr_001",5260461,5262881,"+","MS01G06030","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) probable serine/threonine-protein kinase PBL7 isoform X2 (A)","ko04626: Plant-pathogen interaction","putative receptor protein kinase ZmPK1 [Malus sylvestris]","KPRO_MAIZE RecName: Full=Putative receptor protein kinase ZmPK1; EC=2.7.11.1; Flags: Precursor;","A0A5N5GV00_9ROSA RecName: Full=Receptor-like serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}; EC=2.7.11.1 {ECO:0000256|PIRNR:PIRNR000641};","--","GO:0016021,integral component of membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0048544,recognition of pollen; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0008037,cell recognition; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G06040",0.3871,0.0685,0.1395,0.1556,3.3872,0.244,0.2399,2.0206,0.2268,6.2836,0.6384,1.1699,0.6674,0.7275,1.7135,17,3,6,5,130,9,8,63,9,224,24,52,23,25,59,3.991161585,0.000673953,0.001988616,"up",2.664019874,"4.69254E-05",0.000140829,"up","NA","NA","NA","NA","NA","NA","NA","NA",-1.611025558,0.224850104,0.364830756,false,-0.295087402,0.711897877,0.83656843,false,-0.579423175,0.706918677,0.924453185,false,-1.031397851,0.494607723,0.676875545,false,0.300562376,0.819443902,0.932035948,false,"chr_001",5277337,5279580,"+","MS01G06040","--","K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) systemin receptor SR160 (A)","ko04075: Plant hormone signal transduction","hypothetical protein DVH24_012501 [Malus domestica]","KPRO_MAIZE RecName: Full=Putative receptor protein kinase ZmPK1; EC=2.7.11.1; Flags: Precursor;","A0A498HTK8_MALDO RecName: Full=Receptor-like serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}; EC=2.7.11.1 {ECO:0000256|PIRNR:PIRNR000641};","--","GO:0016021,integral component of membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0048544,recognition of pollen; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0008037,cell recognition; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF01453.27:D-mannose binding lectin","--","--","--"]
["MS01G06100",107.0201,94.7289,91.5923,8.702,27.8795,3.6504,6.9802,21.4551,8.2267,76.045,35.7064,18.6393,30.7933,17.2075,28.0572,3211,2833,2692,191,731,92,159,457,223,1852,917,566,725,404,660,-0.960747063,0.022252439,0.043985406,false,-1.65319454,"4.2779E-13","3.5704E-12","down",-2.614521592,0.001452122,0.003301244,"down",-2.707087729,"1.40133E-12","1.05223E-11","down",-1.731408103,0.025045705,0.065637816,false,-1.039489379,0.012346377,0.050025639,false,-0.101403333,0.915574094,0.979737139,false,-1.630033248,0.097377062,0.226445682,false,-0.928166837,0.278441919,0.569565358,false,"chr_001",5326859,5329227,"-","MS01G06100","--","K13051 L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] | (RefSeq) probable isoaspartyl peptidase/L-asparaginase 2 (A)","ko00250: Alanine, aspartate and glutamate metabolism; ko00460: Cyanoamino acid metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","probable isoaspartyl peptidase/L-asparaginase 2 [Malus domestica]","ASPGB_ARATH RecName: Full=Probable isoaspartyl peptidase/L-asparaginase 2; EC=3.4.19.5; AltName: Full=L-asparagine amidohydrolase 2; Contains: RecName: Full=Isoaspartyl peptidase/L-asparaginase 2 subunit alpha; Contains: RecName: Full=Isoaspartyl peptidase/L-asparaginase 2 subunit beta; Flags: Precursor;","A0A498HV88_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72813.1};","Asparaginase","GO:0005737,cytoplasm; GO:0004067,asparaginase activity; GO:0008798,beta-aspartyl-peptidase activity; GO:0016540,protein autoprocessing; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016810,hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; GO:0016811,hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; GO:0008233,peptidase activity; GO:0008242,omega peptidase activity; GO:0070003,threonine-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0010467,gene expression; GO:0016485,protein processing; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0051604,protein maturation; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF01112.21:Asparaginase","--","--","--"]
["MS01G06110",2.6108,2.316,1.7113,0.3005,0.1258,0.7525,0.0362,0,0.1521,1.422,2.1832,1.7921,1.0506,1.2643,1.4371,95,84,61,8,4,23,1,0,5,42,68,66,30,36,41,-0.120262395,0.689070682,0.764890261,false,-0.536535464,0.091128917,0.135232858,false,-2.306009935,"2.70021E-05","8.43241E-05","down",-4.75309441,"3.75601E-11","2.43233E-10","down",-4.618510499,"2.45457E-10","4.39625E-09","down",-4.203902137,"2.69144E-08","7.04638E-07","down","NA","NA","NA","NA",-2.170512135,0.000116442,0.001034672,"down",-1.747147689,0.002547325,0.026877331,"down","chr_001",5363273,5365170,"-","MS01G06110","--","K14505 cyclin D3, plant | (RefSeq) cyclin-D3-1-like (A)","ko04075: Plant hormone signal transduction","cyclin-D3-1-like [Malus sylvestris]","CCD33_ARATH RecName: Full=Cyclin-D3-3; AltName: Full=G1/S-specific cyclin-D3-3; Short=CycD3;3;","A0A498HS67_MALDO RecName: Full=B-like cyclin {ECO:0000256|ARBA:ARBA00032263};","G1/S-specific cyclin D","GO:0000307,cyclin-dependent protein kinase holoenzyme complex; GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0016538,cyclin-dependent protein serine/threonine kinase regulator activity; GO:0051301,cell division; GO:0010444,guard mother cell differentiation; GO:0044772,mitotic cell cycle phase transition; GO:0000079,regulation of cyclin-dependent protein serine/threonine kinase activity; GO:0048316,seed development; GO:0003674,molecular_function; GO:0019207,kinase regulator activity; GO:0019887,protein kinase regulator activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009888,tissue development; GO:0010374,stomatal complex development; GO:0010440,stomatal lineage progression; GO:0030154,cell differentiation; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0048869,cellular developmental process; GO:0090558,plant epidermis development; GO:0090627,plant epidermal cell differentiation; GO:0000278,mitotic cell cycle; GO:0007049,cell cycle; GO:0022402,cell cycle process; GO:0044770,cell cycle phase transition; GO:1903047,mitotic cell cycle process; GO:0001932,regulation of protein phosphorylation; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019220,regulation of phosphate metabolic process; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031399,regulation of protein modification process; GO:0036211,protein modification process; GO:0042325,regulation of phosphorylation; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043549,regulation of kinase activity; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0045859,regulation of protein kinase activity; GO:0050789,regulation of biological process; GO:0050790,regulation of catalytic activity; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051174,regulation of phosphorus metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051338,regulation of transferase activity; GO:0051726,regulation of cell cycle; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0065009,regulation of molecular function; GO:0071704,organic substance metabolic process; GO:0071900,regulation of protein serine/threonine kinase activity; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1904029,regulation of cyclin-dependent protein kinase activity; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0061458,reproductive system development; GO:0005575,cellular_component; GO:0032991,protein-containing complex; GO:0061695,transferase complex, transferring phosphorus-containing groups; GO:1902494,catalytic complex; GO:1902554,serine/threonine protein kinase complex; GO:1902911,protein kinase complex; GO:1990234,transferase complex; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00134.26:Cyclin, N-terminal domain","--","--","--"]
["MS01G06140",6.4837,6.3499,7.2492,0.2814,0.7066,2.818,0.2711,0.145,0.1709,7.6708,15.7508,10.8298,4.328,8.22,5.4476,126,123,138,4,12,46,4,2,3,121,262,213,66,125,83,0.946662719,0.000430027,0.001333024,false,0.131799527,0.628927722,0.697583107,false,-2.209110887,0.000317266,0.00081968,"down",-4.818906093,"2.30828E-18","2.80406E-17","down",-5.753101172,"7.07174E-23","5.23125E-21","down",-4.934171972,"1.63114E-16","1.88078E-14","down","NA","NA","NA","NA",-3.142230773,"3.53796E-07","6.60303E-06","down",-2.317219237,0.000253791,0.00459476,"down","chr_001",5383883,5387036,"+","MS01G06140","--","--","--","hypothetical protein C1H46_003605 [Malus baccata]","RSS3_ORYSJ RecName: Full=Protein RICE SALT SENSITIVE 3 {ECO:0000303|PubMed:23715469};","A0A540NI28_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE10702.1};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF14215.9:bHLH-MYC and R2R3-MYB transcription factors N-terminal","--","--","--"]
["MS01G06150",5.5032,5.4465,6.453,0.61,1.1063,3.5414,0.5877,0.1048,0.3293,7.8793,15.2914,9.4055,3.6961,7.3179,5.7861,74,73,85,6,13,40,6,1,4,86,176,128,39,77,61,1.081858077,0.000194853,0.000655073,"up",0.239026811,0.433779327,0.515180538,false,-1.528320155,0.00574056,0.011551704,"down",-3.794721051,"8.07491E-12","5.60889E-11","down",-4.866122181,"1.68266E-17","7.25306E-16","down",-4.019210752,"2.53068E-11","1.27077E-09","down","NA","NA","NA","NA",-2.597164772,"2.72037E-06","3.98468E-05","down",-1.743814991,0.00266668,0.027805453,"down","chr_001",5387644,5388218,"+","MS01G06150","--","--","--","uncharacterized protein LOC126605473 isoform X2 [Malus sylvestris]","--","A0A540NI28_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE10702.1};","--","--","--","--","--","--"]
["MS01G06170",3.6584,3.302,2.7008,0.2769,0.2173,0.1658,0.2168,0.1248,0.3503,0.8733,1.2275,1.0006,0.7259,0.6633,0.5167,289,260,209,16,15,11,13,7,25,56,83,80,45,41,32,-1.459466384,"4.19666E-10","3.6135E-09","down",-2.050943779,"3.83301E-15","3.88491E-14","down",-3.66828207,"1.10725E-27","3.29804E-26","down",-3.502243043,"2.17264E-23","3.68086E-22","down",-2.035381754,"1.03337E-06","9.54874E-06","down",-1.445179826,0.00172916,0.010413591,"down","NA","NA","NA","NA",-2.189046774,"1.92356E-08","4.85371E-07","down",-1.588180757,0.000209509,0.00392377,"down","chr_001",5399120,5407393,"+","MS01G06170","--","K10398 kinesin family member 11 | (RefSeq) kinesin-like protein KIN-5D (A)","ko04814: Motor proteins","chromosome-associated kinesin KIF4A [Pyrus ussuriensis x Pyrus communis]","KN4A_GOSHI RecName: Full=Kinesin-like protein KIN-4A {ECO:0000305}; AltName: Full=GhKINESIN-4A {ECO:0000303|PubMed:25600279};","A0A5N5GUY9_9ROSA SubName: Full=Chromosome-associated kinesin KIF4A {ECO:0000313|EMBL:KAB2619425.1};","Kinesin-like protein","GO:0055028,cortical microtubule; GO:0005737,cytoplasm; GO:0005875,microtubule associated complex; GO:0005524,ATP binding; GO:0008017,microtubule binding; GO:0003777,microtubule motor activity; GO:0071555,cell wall organization; GO:0007018,microtubule-based movement; GO:0007052,mitotic spindle organization; GO:0051231,spindle elongation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0015631,tubulin binding; GO:0003774,cytoskeletal motor activity; GO:0140657,ATP-dependent activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0007017,microtubule-based process; GO:0000226,microtubule cytoskeleton organization; GO:0000278,mitotic cell cycle; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0007049,cell cycle; GO:0007051,spindle organization; GO:0022402,cell cycle process; GO:1902850,microtubule cytoskeleton organization involved in mitosis; GO:1903047,mitotic cell cycle process; GO:0007059,chromosome segregation; GO:0098813,nuclear chromosome segregation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005856,cytoskeleton; GO:0005874,microtubule; GO:0005881,cytoplasmic microtubule; GO:0005938,cell cortex; GO:0015630,microtubule cytoskeleton; GO:0030863,cortical cytoskeleton; GO:0030981,cortical microtubule cytoskeleton; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0071944,cell periphery; GO:0099080,supramolecular complex; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex","PF00225.26:Kinesin motor domain","--","--","--"]
["MS01G06190",3.6005,2.8898,3.4377,0.5501,0.412,1.5633,0.4464,0.2983,0.7033,1.0959,1.6826,1.9043,1.7274,0.7308,1.3507,170,136,159,19,17,62,16,10,30,42,68,91,64,27,50,-0.89652398,0.000585921,0.001755685,false,-1.085140917,0.000821561,0.001968561,"down",-1.782594754,"7.67792E-05",0.000222163,"down",-2.47860048,"2.42757E-13","1.95772E-12","down",-1.571812986,0.000202354,0.001074204,"down",-1.387854325,0.004043728,0.020680479,"down",-0.708297678,0.242325181,0.698175831,false,-0.866432264,0.09146156,0.216450129,false,-0.676659115,0.220461088,0.504020162,false,"chr_001",5410991,5413670,"-","MS01G06190","--","K20718 LRR receptor-like serine/threonine-protein kinase ERECTA [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase ERL1 (A)","ko04016: MAPK signaling pathway - plant","probable inactive receptor kinase At5g67200 [Malus domestica]","Y5720_ARATH RecName: Full=Probable inactive receptor kinase At5g67200; Flags: Precursor;","A0A498HTB0_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0004672,protein kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G06200",9.3773,11.3942,12.3799,1.3157,1.1643,2.8809,0.9055,1.1621,0.6088,2.9813,5.4295,4.6191,2.418,2.8817,3.2269,341,413,441,35,37,88,25,30,20,88,169,170,69,82,92,-1.165513118,"5.97219E-07","3.2088E-06","down",-1.665963529,"2.05512E-16","2.33022E-15","down",-2.426387912,"2.31517E-13","2.11144E-12","down",-3.360102639,"9.58884E-32","2.67606E-30","down",-2.17386574,"2.91599E-09","4.39891E-08","down",-1.673688936,"1.33052E-06","2.35118E-05","down",-0.916999397,0.053372549,0.414527666,false,-1.246038558,0.001526568,0.008834797,"down",-0.736996356,0.04939248,0.210010855,false,"chr_001",5420186,5421740,"-","MS01G06200","--","--","--","uncharacterized protein At4g06744-like [Malus sylvestris]","Y4744_ARATH RecName: Full=Uncharacterized protein At4g06744; Flags: Precursor;","A0A540NI26_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE10697.1};","--","GO:0005576,extracellular region; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF13855.9:Leucine rich repeat","--","--","--"]
["MS01G06220",7.7515,7.1831,6.0405,1.1324,2.3247,1.1741,1.299,2.8894,1.8339,3.2804,1.2674,1.3252,1.9857,1.8652,2.239,393,363,300,42,103,50,50,104,84,135,55,68,79,74,89,-1.635175697,"2.1935E-05","8.88554E-05","down",-1.494647347,"7.57662E-13","6.16673E-12","down",-1.948990173,"6.80491E-09","3.66994E-08","down",-1.520534072,"6.90343E-07","2.66447E-06","down",0.131287164,0.785679177,0.865877893,false,-0.009640895,0.977131894,0.988580205,false,0.427319894,0.338286564,0.771212822,false,-0.295300867,0.562158176,0.731056041,false,-0.425930448,0.250235586,0.53898058,false,"chr_001",5444627,5447574,"-","MS01G06220","--","--","--","hypothetical protein DVH24_012483 [Malus domestica]","--","A0A498HPG7_MALDO RecName: Full=B30.2/SPRY domain-containing protein {ECO:0000259|PROSITE:PS50188};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00622.31:SPRY domain","--","--","--"]
["MS01G06250",109.1862,145.7006,124.4265,75.1987,83.1478,55.5768,76.3979,85.5502,83.1676,51.0177,50.5212,54.1642,69.9812,56.8652,63.8914,3396,4517,3791,1711,2260,1452,1804,1889,2337,1288,1345,1705,1708,1384,1558,-1.09689102,"4.04933E-13","4.93858E-12","down",-0.697404661,"2.02674E-05","6.46408E-05",false,-0.602130161,0.008056615,0.015704867,false,-0.346508152,0.028969709,0.049457641,false,0.763670963,"6.42452E-10","1.0754E-08",false,0.3668479,0.013314043,0.053005254,false,0.252389066,0.252934358,0.706535438,false,0.513750361,0.017193427,0.061539505,false,0.122465121,0.583309383,0.811532875,false,"chr_001",5475344,5476673,"+","MS01G06250","--","K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor ERF011-like (A)","--","ethylene-responsive transcription factor ERF011-like [Malus domestica]","ERF11_ARATH RecName: Full=Ethylene-responsive transcription factor ERF011;","D5L126_MALDO SubName: Full=AP2 domain class transcription factor {ECO:0000313|EMBL:ADE41135.1}; SubName: Full=Ethylene response factor 5 {ECO:0000313|EMBL:ADZ28108.1};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0042742,defense response to bacterium; GO:0009873,ethylene-activated signaling pathway; GO:0010941,regulation of cell death; GO:0009617,response to bacterium; GO:0009409,response to cold; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009723,response to ethylene; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0008219,cell death; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00847.23:AP2 domain","AP2/ERF-ERF","TF","AP2/ERF->AP2/ERF-ERF"]
["MS01G06260",2.2973,2.7762,1.4391,0.0714,0.1792,0,0,0.0735,0,0.9005,0.305,0.1548,0.2661,0.0667,0.0666,44,53,27,1,3,0,0,1,0,14,5,3,4,1,1,-2.08653438,0.001487903,0.004035707,"down",-3.735270439,"1.18526E-06","4.58112E-06","down",-4.455498359,"6.64054E-07","2.68379E-06","down",-6.235398,"1.27098E-06","4.71996E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",5496616,5499341,"+","MS01G06260","--","--","--","hypothetical protein C1H46_003592 [Malus baccata]","WOX4_ARATH RecName: Full=WUSCHEL-related homeobox 4;","A0A540NI61_MALBA RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0051301,cell division; GO:0010087,phloem or xylem histogenesis; GO:0010067,procambium histogenesis; GO:0007165,signal transduction; GO:0009888,tissue development; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0009793,embryo development ending in seed dormancy; GO:0010065,primary meristem tissue development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0048316,seed development; GO:0048507,meristem development; GO:0048508,embryonic meristem development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0061458,reproductive system development; GO:0007154,cell communication; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00046.32:Homeodomain","HB-WOX","TF","HB->HB-WOX"]
["MS01G06320",31.3909,33.3406,30.1937,11.6335,16.4118,11.4935,13.1025,15.4466,15.5969,16.7239,14.1316,13.2475,14.2057,12.8014,13.7911,2250,2382,2120,610,1028,692,713,786,1010,973,867,961,799,718,775,-0.915690771,"1.1531E-08","8.11319E-08",false,-0.925916616,"2.51734E-13","2.14836E-12",false,-1.040947545,"8.17008E-07","3.25993E-06","down",-0.823275509,"3.00152E-09","1.56879E-08",false,0.106134492,0.546416292,0.684098074,false,0.118680752,0.414532221,0.608301525,false,0.21409241,0.348232246,0.777355732,false,-0.106611303,0.653951821,0.796589871,false,-0.08752154,0.688896759,0.870122596,false,"chr_001",5531858,5537025,"+","MS01G06320","--","K19041 E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase ZFP1 (A)","--","hypothetical protein DVH24_012477 [Malus domestica]","RHG1A_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase RHG1A {ECO:0000305}; EC=2.3.2.27; AltName: Full=RING-H2 finger G1a {ECO:0000303|PubMed:9781696}; AltName: Full=RING-H2 zinc finger protein RHG1a {ECO:0000305}; AltName: Full=RING-type E3 ubiquitin transferase RHG1A {ECO:0000305};","A0A498HV62_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72793.1};","FOG: Predicted E3 ubiquitin ligase","GO:0046872,metal ion binding; GO:0061630,ubiquitin protein ligase activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0004842,ubiquitin-protein transferase activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0061659,ubiquitin-like protein ligase activity; GO:0140096,catalytic activity, acting on a protein","PF13639.9:Ring finger domain","--","--","--"]
["MS01G06340",3.7766,2.6278,2.363,0.3331,0.7667,0.5076,0.4814,0.1716,0.2023,1.726,0.5693,0.963,0.3105,1.9461,1.7093,62,43,38,4,11,7,6,2,3,23,8,16,4,25,22,-1.237793045,0.013429329,0.028403242,"down",-0.866276251,0.122124698,0.174620998,false,-2.214297952,"2.74245E-05","8.55266E-05","down",-3.08678533,"7.41048E-07","2.8443E-06","down","NA","NA","NA","NA",-2.200195784,0.011072993,0.045981833,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.326766811,0.087274375,0.299686711,false,"chr_001",5544275,5545503,"+","MS01G06340","--","--","--","hypothetical protein C1H46_003585 [Malus baccata]","BH095_ARATH RecName: Full=Transcription factor bHLH95 {ECO:0000303|PubMed:14600211}; AltName: Full=Basic helix-loop-helix protein 95 {ECO:0000303|PubMed:14600211}; Short=AtbHLH95 {ECO:0000303|PubMed:14600211}; Short=bHLH 95 {ECO:0000303|PubMed:14600211}; AltName: Full=Protein RETARDED GROWTH OF EMBRYO 1 {ECO:0000303|PubMed:18567831}; AltName: Full=Protein ZHOUPI {ECO:0000303|PubMed:18849529}; AltName: Full=Transcription factor EN 21; AltName: Full=bHLH transcription factor bHLH095 {ECO:0000303|PubMed:14600211};","A0A540NI08_MALBA RecName: Full=BHLH domain-containing protein {ECO:0000259|PROSITE:PS50888};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0046983,protein dimerization activity; GO:0009793,embryo development ending in seed dormancy; GO:0009960,endosperm development; GO:0010115,regulation of abscisic acid biosynthetic process; GO:0006355,regulation of DNA-templated transcription; GO:0010162,seed dormancy process; GO:0048317,seed morphogenesis; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0005515,protein binding; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0009888,tissue development; GO:0006066,alcohol metabolic process; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006714,sesquiterpenoid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009687,abscisic acid metabolic process; GO:0009688,abscisic acid biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010565,regulation of cellular ketone metabolic process; GO:0016053,organic acid biosynthetic process; GO:0016106,sesquiterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0019216,regulation of lipid metabolic process; GO:0019222,regulation of metabolic process; GO:0019747,regulation of isoprenoid metabolic process; GO:0019748,secondary metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042180,cellular ketone metabolic process; GO:0043288,apocarotenoid metabolic process; GO:0043289,apocarotenoid biosynthetic process; GO:0043436,oxoacid metabolic process; GO:0043455,regulation of secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046165,alcohol biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0046890,regulation of lipid biosynthetic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0062012,regulation of small molecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:0080090,regulation of primary metabolic process; GO:0120254,olefinic compound metabolic process; GO:0120255,olefinic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:1902644,tertiary alcohol metabolic process; GO:1902645,tertiary alcohol biosynthetic process; GO:1902930,regulation of alcohol biosynthetic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0010431,seed maturation; GO:0021700,developmental maturation; GO:0022611,dormancy process; GO:0032504,multicellular organism reproduction; GO:0048609,multicellular organismal reproductive process; GO:0071695,anatomical structure maturation; GO:0009653,anatomical structure morphogenesis; GO:0090698,post-embryonic plant morphogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00010.29:Helix-loop-helix DNA-binding domain","bHLH","TF","bHLH"]
["MS01G06350",18.401,14.5799,25.0816,2.7155,2.5363,3.3108,2.7267,2.5036,1.9905,9.5316,12.3368,10.4544,6.2621,7.4287,6.0276,880,695,1175,95,106,133,99,85,86,370,505,506,235,278,226,-0.657859121,0.002468859,0.006339699,false,-1.261448399,"8.54084E-09","4.40263E-08","down",-2.546282698,"1.53065E-25","3.93712E-24","down",-2.717600911,"2.49075E-26","5.05455E-25","down",-2.051827488,"1.16998E-21","7.8383E-20","down",-1.444773193,"1.51424E-10","6.46659E-09","down",-0.175597727,0.486776154,0.850089489,false,-1.872084466,"1.54899E-22","3.72638E-20","down",-1.259109021,"4.23182E-10","5.74989E-08","down","chr_001",5548543,5551945,"+","MS01G06350","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1-like (A)","ko04626: Plant-pathogen interaction","hypothetical protein DVH24_012476 [Malus domestica]","Y1154_ARATH RecName: Full=Probable serine/threonine-protein kinase At1g01540; EC=2.7.11.1;","A0A498HS49_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","Serine/threonine protein kinase","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0046777,protein autophosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G06360",13.5228,11.5501,19.7743,65.1983,49.5594,70.7043,60.6571,36.8096,71.6035,25.6652,33.3052,38.0984,47.0414,67.0237,51.2783,74,63,106,261,237,325,252,143,354,114,156,211,202,287,220,1.302905241,"1.71073E-06","8.53083E-06","up",2.177611227,"9.48335E-18","1.20581E-16","up",2.260994492,"2.3156E-18","3.39264E-17","up",2.196858223,"4.90135E-13","3.84534E-12","up",0.907314455,0.001290741,0.00541098,false,0.035284385,0.896482981,0.943869079,false,-0.064681712,0.81093674,0.954413429,false,0.973545409,"1.1461E-05",0.000139155,false,0.107559373,0.618791014,0.832057856,false,"chr_001",5564426,5564659,"-","MS01G06360","--","K01761 methionine-gamma-lyase [EC:4.4.1.11] | (RefSeq) methionine gamma-lyase-like (A)","ko00270: Cysteine and methionine metabolism; ko00450: Selenocompound metabolism; ko01100: Metabolic pathways","methionine gamma-lyase-like [Malus domestica]","MGL_ARATH RecName: Full=Methionine gamma-lyase; Short=AtMGL; EC=4.4.1.11; AltName: Full=L-methioninase;","A0A5N5I392_9ROSA SubName: Full=Methionine gamma-lyase-like {ECO:0000313|EMBL:KAB2632981.1};","Cystathionine beta-lyases/cystathionine gamma-synthases","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0016846,carbon-sulfur lyase activity; GO:0004123,cystathionine gamma-lyase activity; GO:0018826,methionine gamma-lyase activity; GO:0030170,pyridoxal phosphate binding; GO:0009970,cellular response to sulfate starvation; GO:0042631,cellular response to water deprivation; GO:0019343,cysteine biosynthetic process via cystathionine; GO:0019458,methionine catabolic process via 2-oxobutanoate; GO:0051289,protein homotetramerization; GO:0019346,transsulfuration; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0005488,binding; GO:0019842,vitamin binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0070279,vitamin B6 binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006950,response to stress; GO:0007154,cell communication; GO:0008150,biological_process; GO:0009267,cellular response to starvation; GO:0009605,response to external stimulus; GO:0009987,cellular process; GO:0009991,response to extracellular stimulus; GO:0031667,response to nutrient levels; GO:0031668,cellular response to extracellular stimulus; GO:0031669,cellular response to nutrient levels; GO:0033554,cellular response to stress; GO:0042594,response to starvation; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071496,cellular response to external stimulus; GO:0001101,response to acid chemical; GO:0009414,response to water deprivation; GO:0009415,response to water; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:0042221,response to chemical; GO:0070887,cellular response to chemical stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071229,cellular response to acid chemical; GO:0071462,cellular response to water stimulus; GO:0104004,cellular response to environmental stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0000096,sulfur amino acid metabolic process; GO:0000097,sulfur amino acid biosynthetic process; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006534,cysteine metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009058,biosynthetic process; GO:0009069,serine family amino acid metabolic process; GO:0009070,serine family amino acid biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019344,cysteine biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044272,sulfur compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901605,alpha-amino acid metabolic process; GO:1901607,alpha-amino acid biosynthetic process; GO:0000098,sulfur amino acid catabolic process; GO:0006555,methionine metabolic process; GO:0009056,catabolic process; GO:0009063,cellular amino acid catabolic process; GO:0009066,aspartate family amino acid metabolic process; GO:0009068,aspartate family amino acid catabolic process; GO:0009087,methionine catabolic process; GO:0016054,organic acid catabolic process; GO:0044248,cellular catabolic process; GO:0044273,sulfur compound catabolic process; GO:0044282,small molecule catabolic process; GO:0046395,carboxylic acid catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901606,alpha-amino acid catabolic process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0051259,protein complex oligomerization; GO:0051260,protein homooligomerization; GO:0051262,protein tetramerization; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0009092,homoserine metabolic process; GO:0050667,homocysteine metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF01053.23:Cys/Met metabolism PLP-dependent enzyme","--","--","--"]
["MS01G06400",4.0863,2.9698,1.9051,0.4398,0.2945,1.762,0.1271,0.4532,0.6054,1.1496,2.293,0.922,0.164,0.3701,0.9439,127,92,58,10,8,46,3,10,17,29,61,29,4,9,23,-0.871923884,0.046889622,0.083537421,false,-2.323104975,"2.29381E-05","7.25011E-05","down",-1.666861524,0.007354839,0.014469699,"down",-2.638245125,"5.90031E-07","2.29817E-06","down",-1.758134996,0.00488522,0.016898388,"down","NA","NA","NA","NA","NA","NA","NA","NA",-0.787712734,0.254336826,0.437779497,false,0.67468045,0.41876745,0.697751454,false,"chr_001",5625418,5626863,"-","MS01G06400","--","K09419 heat shock transcription factor, other eukaryote | (RefSeq) HSF8; heat stress transcription factor B-4 (A)","--","heat stress transcription factor B-4 [Malus domestica]","HSFB4_ARATH RecName: Full=Heat stress transcription factor B-4; Short=AtHsfB4; AltName: Full=AtHsf-02;","D9ZJ32_MALDO SubName: Full=HSF domain class transcription factor {ECO:0000313|EMBL:ADL36735.1};","Heat shock transcription factor","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0008356,asymmetric cell division; GO:0006357,regulation of transcription by RNA polymerase II; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0000976,transcription cis-regulatory region binding; GO:0000977,RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000987,cis-regulatory region sequence-specific DNA binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0051301,cell division; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00447.20:HSF-type DNA-binding","HSF","TF","HSF"]
["MS01G06420",23.0992,15.0043,13.8133,6.0528,5.492,4.2392,6.9743,8.5488,5.141,11.2916,10.9249,11.626,6.7476,10.4861,12.4012,746,483,437,143,155,115,171,196,150,296,302,380,171,265,314,-0.433386791,0.068549859,0.115847929,false,-0.526311155,0.060226224,0.093923019,false,-1.502230341,"1.47951E-07","6.59118E-07","down",-1.044325005,0.000401022,0.000998777,"down",-0.600228999,0.014026597,0.040661006,false,-0.505461349,0.085957818,0.211930747,false,0.454425644,0.124969832,0.571030337,false,-1.051801668,"2.03933E-06","3.09244E-05","down",-0.951813948,0.000916481,0.012676155,false,"chr_001",5646522,5648100,"-","MS01G06420","--","--","--","uncharacterized protein LOC103455958 [Malus domestica]","--","A0A540NHZ9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE10675.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF03168.16:Late embryogenesis abundant protein","--","--","--"]
["MS01G06430",11.7814,10.3099,10.9955,4.3789,3.7394,4.2998,5.2955,7.1469,5.4494,4.5821,5.3248,4.7796,3.863,3.6266,3.9213,548,478,501,149,152,168,187,236,229,173,212,225,141,132,143,-0.987510117,"7.45146E-11","7.06896E-10",false,-1.243681695,"1.98564E-14","1.88342E-13","down",-1.202544345,"7.41128E-13","6.40233E-12","down",-0.603379653,0.002186389,0.004777106,false,0.396502939,0.058986512,0.130638614,false,0.655307875,0.002325897,0.013262838,false,0.597798277,0.006924903,0.16752692,false,-0.198271754,0.281100452,0.468011644,false,0.066371943,0.72821529,0.888835005,false,"chr_001",5669197,5672545,"+","MS01G06430","--","K14829 pre-rRNA-processing protein IPI3 | (RefSeq) protein ROOT INITIATION DEFECTIVE 3 (A)","--","hypothetical protein C1H46_003577 [Malus baccata]","RID3_ARATH RecName: Full=Protein ROOT INITIATION DEFECTIVE 3; AltName: Full=Root initiation defective 3 protein; AltName: Full=WD-40 repeat-containing protein RID3;","A0A540NI17_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE10674.1};","WD40 repeat protein","GO:0080008,Cul4-RING E3 ubiquitin ligase complex; GO:0005656,nuclear pre-replicative complex; GO:0097344,Rix1 complex; GO:0006261,DNA-templated DNA replication; GO:1902184,negative regulation of shoot apical meristem development; GO:0006364,rRNA processing; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006260,DNA replication; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0009888,tissue development; GO:0032502,developmental process; GO:0048507,meristem development; GO:0048509,regulation of meristem development; GO:0048519,negative regulation of biological process; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051093,negative regulation of developmental process; GO:0065007,biological regulation; GO:1902182,shoot apical meristem development; GO:1902183,regulation of shoot apical meristem development; GO:0006396,RNA processing; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016072,rRNA metabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0034470,ncRNA processing; GO:0034660,ncRNA metabolic process; GO:0042254,ribosome biogenesis; GO:0044085,cellular component biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0000151,ubiquitin ligase complex; GO:0005575,cellular_component; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0032991,protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032993,protein-DNA complex; GO:0036387,pre-replicative complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex","PF00400.35:WD domain, G-beta repeat","--","--","--"]
["MS01G06440",3.4496,3.6664,5.3694,27.5927,21.0658,20.4523,15.8806,10.488,28.4667,23.7318,27.4928,44.6811,38.7374,53.6862,38.0745,101,107,154,591,539,503,353,218,753,564,689,1324,890,1230,874,3.129034624,"1.19038E-28","5.38699E-27","up",3.681416612,"4.93097E-62","5.60177E-60","up",2.689579816,"1.71903E-28","5.42406E-27","up",2.406952434,"2.42868E-12","1.78403E-11","up",-0.706162059,0.052094499,0.118449885,false,-1.25601628,"9.75764E-05",0.000949783,"down",-0.28227089,0.407474431,0.808624384,false,-0.420402554,0.123819774,0.268351803,false,-0.967110957,"8.88931E-06",0.0003057,false,"chr_001",5678997,5680248,"+","MS01G06440","--","K12126 phytochrome-interacting factor 3 | (RefSeq) transcription factor PIF3-like (A)","ko04075: Plant hormone signal transduction; ko04712: Circadian rhythm - plant","transcription factor HEC2-like [Malus domestica]","HEC2_ARATH RecName: Full=Transcription factor HEC2; AltName: Full=Basic helix-loop-helix protein 37; Short=AtbHLH37; Short=bHLH 37; AltName: Full=Protein HECATE 2; AltName: Full=Transcription factor EN 117; AltName: Full=bHLH transcription factor bHLH037;","A0A540NJ79_MALBA RecName: Full=BHLH domain-containing protein {ECO:0000259|PROSITE:PS50888};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0046983,protein dimerization activity; GO:0048462,carpel formation; GO:0048467,gynoecium development; GO:0080126,ovary septum development; GO:0006355,regulation of DNA-templated transcription; GO:0009266,response to temperature stimulus; GO:0010500,transmitting tissue development; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0005515,protein binding; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009653,anatomical structure morphogenesis; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048437,floral organ development; GO:0048438,floral whorl development; GO:0048440,carpel development; GO:0048444,floral organ morphogenesis; GO:0048445,carpel morphogenesis; GO:0048449,floral organ formation; GO:0048608,reproductive structure development; GO:0048646,anatomical structure formation involved in morphogenesis; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0090696,post-embryonic plant organ development; GO:0090697,post-embryonic plant organ morphogenesis; GO:0090698,post-embryonic plant morphogenesis; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:1905393,plant organ formation; GO:0035670,plant-type ovary development; GO:1905328,plant septum development; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00010.29:Helix-loop-helix DNA-binding domain","bHLH","TF","bHLH"]
["MS01G06470",5.3187,4.0323,2.6839,0.9501,0.7608,0.7195,0.9553,0.6811,1.2711,1.8615,3.3894,2.7172,2.1951,1.8151,2.3898,176,133,87,23,22,20,24,16,38,50,96,91,57,47,62,-0.422013823,0.213298741,0.299581326,false,-0.624763926,0.053033026,0.083955219,false,-2.102259416,"4.82894E-08","2.29731E-07","down",-1.770360138,"4.02281E-06","1.3879E-05","down",-1.333687272,0.000371377,0.00183339,"down",-1.125271215,0.001626632,0.009895313,"down",0.330523017,0.447932622,0.829016296,false,-1.664952736,"7.72551E-06","9.90085E-05","down",-1.453917122,"3.34001E-05",0.000913002,"down","chr_001",5720872,5722817,"-","MS01G06470","--","--","--","uncharacterized protein LOC126605974 isoform X2 [Malus sylvestris]","--","A0A498HUF0_MALDO RecName: Full=Remorin_C domain-containing protein {ECO:0000259|Pfam:PF03763};","--","GO:1901700,response to oxygen-containing compound; GO:0008150,biological_process; GO:0042221,response to chemical; GO:0050896,response to stimulus","--","--","--","--"]
["MS01G06480",6.1724,5.8054,6.3313,11.6218,10.5776,11.6051,9.42,9.6976,10.1494,8.0795,8.9966,10.1743,8.5654,9.0825,7.6835,416,390,418,573,623,657,482,464,618,442,519,694,453,479,406,0.760356122,"1.34279E-07","8.01795E-07",false,0.761587189,"1.50163E-07","6.56411E-07",false,1.09848985,"2.56855E-16","3.12018E-15","up",0.959809528,"1.03508E-12","7.85152E-12",false,0.21260828,0.142902499,0.259396025,false,0.213533133,0.14965565,0.312444352,false,-0.140307703,0.295382631,0.739273466,false,0.355920191,0.015604999,0.057048179,false,0.362387863,0.014139643,0.091369722,false,"chr_001",5726638,5731216,"-","MS01G06480","--","K14292 trimethylguanosine synthase [EC:2.1.1.-] | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC103455963 (A)","--","hypothetical protein C1H46_008317 [Malus baccata]","--","A0A540N4M3_MALBA RecName: Full=Trimethylguanosine synthase {ECO:0000256|ARBA:ARBA00018517};","Methylase","GO:0008168,methyltransferase activity; GO:0009452,7-methylguanosine RNA capping; GO:0001510,RNA methylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016741,transferase activity, transferring one-carbon groups; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0036260,RNA capping; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0009451,RNA modification; GO:0032259,methylation; GO:0043412,macromolecule modification; GO:0043414,macromolecule methylation; GO:0044260,cellular macromolecule metabolic process","PF09445.13:RNA cap guanine-N2 methyltransferase","--","--","--"]
["MS01G06490",0.6395,0.5541,0.3561,6.0003,3.4928,3.7722,4.7479,4.2585,9.1702,0.2507,0.5434,0.2585,1.1484,1.5603,0.5191,22,19,12,151,105,109,124,104,285,7,16,9,31,42,14,"NA","NA","NA","NA",1.347223834,0.0097198,0.018505462,"up",3.306067114,"9.055E-18","1.24983E-16","up",3.817692253,"3.7568E-22","5.87618E-21","up",4.222148245,"8.35075E-21","5.15677E-19","up",2.487930891,"6.34377E-09","1.88968E-07","up",0.514614388,0.153123512,0.607015367,false,3.711567814,"2.21193E-17","2.55244E-15","up",1.983422408,"2.36292E-06",0.000100981,"up","chr_001",5736728,5738198,"-","MS01G06490","--","--","--","hypothetical protein C1H46_008318 [Malus baccata]","Y3720_ARATH RecName: Full=UPF0481 protein At3g47200;","A0A540N4N5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE06008.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF03140.18:Plant protein of unknown function","--","--","--"]
["MS01G06500",13.9014,14.5476,14.1012,24.0366,22.843,30.0367,19.9584,17.3728,19.1509,18.8845,19.0815,22.4052,15.6049,20.2194,17.6187,789,823,784,998,1133,1432,860,700,982,870,927,1287,695,898,784,0.691874635,"1.61479E-07","9.52659E-07",false,0.619406672,"1.05782E-05","3.5373E-05",false,1.063573144,"1.05897E-13","9.99444E-13","up",0.691706488,"1.7897E-07","7.46022E-07",false,0.013112145,0.92703991,0.956503421,false,0.087114068,0.57432635,0.74056815,false,-0.373709595,0.013562338,0.236406468,false,0.389536201,0.011551095,0.045072293,false,0.469034179,0.00437842,0.039712386,false,"chr_001",5740528,5744340,"-","MS01G06500","--","K14292 trimethylguanosine synthase [EC:2.1.1.-] | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC103455963 (A)","--","hypothetical protein C1H46_008319 [Malus baccata]","--","A0A540N4R3_MALBA RecName: Full=Trimethylguanosine synthase {ECO:0000256|ARBA:ARBA00018517};","Methylase","GO:0008168,methyltransferase activity; GO:0009452,7-methylguanosine RNA capping; GO:0001510,RNA methylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016741,transferase activity, transferring one-carbon groups; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0036260,RNA capping; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0009451,RNA modification; GO:0032259,methylation; GO:0043412,macromolecule modification; GO:0043414,macromolecule methylation; GO:0044260,cellular macromolecule metabolic process","PF09445.13:RNA cap guanine-N2 methyltransferase","--","--","--"]
["MS01G06580",23.9633,31.5383,29.5844,3.6172,2.6888,2.495,3.7921,3.0117,2.0854,6.8851,6.8507,7.3208,3.7498,3.6251,2.8891,1132,1485,1369,125,111,99,136,101,89,264,277,350,139,134,107,-1.826104672,"3.61752E-30","1.84313E-28","down",-2.756333065,"1.2763E-49","9.33122E-48","down",-3.058957148,"2.32518E-44","1.66886E-42","down",-2.970843077,"1.4045E-31","3.86529E-30","down",-1.133135933,"1.92327E-05",0.000133608,"down",-0.200622568,0.492654378,0.67651968,false,0.083686305,0.79354829,0.951501481,false,-1.215238645,"4.94626E-08","1.12598E-06","down",-0.276266731,0.284127409,0.575942923,false,"chr_001",5792892,5801259,"+","MS01G06580","--","--","--","hypothetical protein DVH24_012456 [Malus domestica]","COR27_ARATH RecName: Full=Cold-regulated protein 27 {ECO:0000303|PubMed:19566593};","A0A498HS31_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72772.1};","--","GO:0005634,nucleus; GO:0045892,negative regulation of DNA-templated transcription; GO:0042752,regulation of circadian rhythm; GO:2000028,regulation of photoperiodism, flowering; GO:0009737,response to abscisic acid; GO:0009646,response to absence of light; GO:0009637,response to blue light; GO:0009409,response to cold; GO:0010114,response to red light; GO:0009615,response to virus; GO:0048511,rhythmic process; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0007623,circadian rhythm; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009648,photoperiodism; GO:0009791,post-embryonic development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048573,photoperiodism, flowering; GO:0048583,regulation of response to stimulus; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0050896,response to stimulus; GO:0061458,reproductive system development; GO:2000241,regulation of reproductive process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0009642,response to light intensity; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009639,response to red or far red light; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G06590",11.7067,9.9355,11.389,4.1365,5.7361,2.8383,4.2676,5.2958,6.1574,7.0417,5.8207,4.5302,5.687,3.7889,4.5614,383,324,365,99,164,78,106,123,182,187,163,150,146,97,117,-0.736643117,0.001032476,0.002912993,false,-0.939182665,"9.93794E-06","3.33716E-05",false,-1.147969249,0.000126052,0.000350731,"down",-0.78930015,"6.39662E-05",0.000183368,false,-0.04125718,0.876465965,0.925587807,false,0.165621915,0.516723725,0.695626368,false,0.35305517,0.293363563,0.738187208,false,-0.394977425,0.261208485,0.446326494,false,-0.180906258,0.597481871,0.819580641,false,"chr_001",5803514,5806235,"+","MS01G06590","--","K18588 coenzyme Q-binding protein COQ10 | (RefSeq) coenzyme Q-binding protein COQ10 homolog, mitochondrial-like (A)","--","hypothetical protein DVH24_012455, partial [Malus domestica]","--","A0A498HUE0_MALDO RecName: Full=Polyketide_cyc domain-containing protein {ECO:0000259|Pfam:PF03364}; Flags: Fragment;","Oligoketide cyclase/lipid transport protein","GO:0048039,ubiquinone binding; GO:0045333,cellular respiration; GO:0006744,ubiquinone biosynthetic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0048038,quinone binding; GO:0006091,generation of precursor metabolites and energy; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0015980,energy derivation by oxidation of organic compounds; GO:0044237,cellular metabolic process; GO:0006743,ubiquinone metabolic process; GO:0009058,biosynthetic process; GO:0042180,cellular ketone metabolic process; GO:0042181,ketone biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:1901661,quinone metabolic process; GO:1901663,quinone biosynthetic process","PF03364.23:Polyketide cyclase / dehydrase and lipid transport","--","--","--"]
["MS01G06610",48.3088,26.5751,38.8863,9.479,8.411,10.1814,9.7122,16.605,13.9435,18.5096,21.8464,17.1061,14.9047,13.1742,14.6525,2090,1146,1648,300,318,370,319,510,545,650,809,749,506,446,497,-0.801282441,0.000654293,0.001938152,false,-1.120508744,"7.93381E-07","3.14721E-06","down",-1.807813993,"1.2255E-13","1.14716E-12","down",-1.215859012,"1.08474E-05","3.52187E-05","down",-0.402328732,0.085911478,0.175593714,false,-0.080232646,0.721904565,0.842993714,false,0.591786906,0.013243715,0.234093683,false,-0.990435613,"2.35469E-09","7.17194E-08",false,-0.662593492,"1.62649E-05",0.000500924,false,"chr_001",5823192,5826939,"+","MS01G06610","--","K09843 (+)-abscisic acid 8'-hydroxylase [EC:1.14.14.137] | (RefSeq) abscisic acid 8'-hydroxylase CYP707A1-like (A)","ko00906: Carotenoid biosynthesis; ko01110: Biosynthesis of secondary metabolites","abscisic acid 8'-hydroxylase CYP707A1-like [Malus domestica]","ABAH1_SOLLC RecName: Full=Abscisic acid 8'-hydroxylase CYP707A1 {ECO:0000305}; Short=ABA 8'-hydroxylase CYP707A1 {ECO:0000305}; Short=SlCYP707A1 {ECO:0000303|PubMed:19322584}; EC=1.14.14.137 {ECO:0000250|UniProtKB:Q949P1}; AltName: Full=Cytochrome P450 707A1 {ECO:0000303|PubMed:19322584};","A0A498HPT7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72770.1};","Cytochrome P450 CYP4/CYP19/CYP26 subfamilies","GO:0016021,integral component of membrane; GO:0010295,(+)-abscisic acid 8'-hydroxylase activity; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016491,oxidoreductase activity; GO:0046345,abscisic acid catabolic process; GO:0009856,pollination; GO:0009737,response to abscisic acid; GO:0009733,response to auxin; GO:0009414,response to water deprivation; GO:0016125,sterol metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006066,alcohol metabolic process; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006714,sesquiterpenoid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008300,isoprenoid catabolic process; GO:0009056,catabolic process; GO:0009687,abscisic acid metabolic process; GO:0009987,cellular process; GO:0016042,lipid catabolic process; GO:0016054,organic acid catabolic process; GO:0016107,sesquiterpenoid catabolic process; GO:0016115,terpenoid catabolic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043288,apocarotenoid metabolic process; GO:0043290,apocarotenoid catabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044242,cellular lipid catabolic process; GO:0044248,cellular catabolic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044282,small molecule catabolic process; GO:0046164,alcohol catabolic process; GO:0046395,carboxylic acid catabolic process; GO:0071704,organic substance metabolic process; GO:0072329,monocarboxylic acid catabolic process; GO:0120254,olefinic compound metabolic process; GO:0120256,olefinic compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901616,organic hydroxy compound catabolic process; GO:1902644,tertiary alcohol metabolic process; GO:0000003,reproduction; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0044706,multi-multicellular organism process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0001101,response to acid chemical; GO:0006950,response to stress; GO:0009415,response to water; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:0008202,steroid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G06620",1.7817,1.2513,2.219,0.6332,0.367,0.5515,0.3286,0.3514,0.6311,0.9219,0.8743,0.7746,0.2725,0.7286,0.7727,50,35,61,13,9,13,7,7,16,21,21,22,6,16,17,-0.843545067,0.029688673,0.056416307,false,-1.275625307,0.007571314,0.01479941,"down",-1.553653132,0.000729471,0.001760209,"down",-1.703897881,0.000438274,0.001084206,"down",-0.850867039,0.111400855,0.214089215,false,"NA","NA","NA","NA","NA","NA","NA","NA",-0.694891383,0.170385213,0.333935725,false,"NA","NA","NA","NA","chr_001",5828977,5830944,"-","MS01G06620","--","K03671 thioredoxin 1 | (RefSeq) thioredoxin H-type (A)","--","thioredoxin-like 4, chloroplastic [Malus domestica]","TRL4_ARATH RecName: Full=Thioredoxin-like 4, chloroplastic; AltName: Full=Lilium-type thioredoxin 3; Flags: Precursor;","A0A498HPD8_MALDO RecName: Full=Thioredoxin domain-containing protein {ECO:0000259|PROSITE:PS51352};","Predicted transcriptional regulator","GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma","PF00085.23:Thioredoxin","--","--","--"]
["MS01G06650",1.4752,1.4416,1.4277,0.9428,0.7454,1.1632,1.0851,0.8366,1.1663,0.7317,0.7834,0.7761,0.2197,0.661,0.5865,77,75,73,36,34,51,43,31,55,31,35,41,9,27,24,-0.737072392,0.008074207,0.018187429,false,-1.279965918,0.001208194,0.002794551,"down",-0.400431416,0.172271419,0.234970075,false,-0.207818888,0.463765223,0.545185735,false,0.541836529,0.096861251,0.192704909,false,1.084779984,0.015810413,0.060364454,false,0.191082038,0.566644601,0.880293666,false,0.353132871,0.301191727,0.491234102,false,0.902844284,0.051981341,0.217252533,false,"chr_001",5839361,5841592,"+","MS01G06650","--","no KO assigned | (RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g50270-like (A)","--","hypothetical protein DVH24_012451 [Malus domestica]","PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860;","A0A498HTF6_MALDO RecName: Full=VID27 domain-containing protein {ECO:0000259|Pfam:PF08553};","FOG: PPR repeat","GO:0043231,intracellular membrane-bounded organelle; GO:0005739,mitochondrion; GO:0003723,RNA binding; GO:0009451,RNA modification; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016070,RNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0110165,cellular anatomical entity; GO:0005737,cytoplasm","PF13041.9:PPR repeat family","--","--","--"]
["MS01G06670",2.5372,1.3728,1.2223,0.2728,0.3588,0.1697,0.5257,0.8834,0.7573,0.3161,0.4996,0.2817,0.2906,0.1093,0.3272,89,48,42,7,11,5,14,22,24,9,15,10,8,3,9,-2.055900825,"2.92336E-05",0.000115801,"down",-2.531670314,"5.52978E-06","1.93156E-05","down",-2.458892764,"8.06886E-06","2.75555E-05","down",-0.97010461,0.03139699,0.053186451,false,1.098654541,0.038608042,0.093543163,false,1.578656969,0.009988916,0.042448291,"up",1.487191921,0.011345534,0.214731947,false,"NA","NA","NA","NA","NA","NA","NA","NA","chr_001",5842515,5844791,"+","MS01G06670","--","--","--","protein CYPRO4-like [Malus domestica]","CYPR4_CYNCA RecName: Full=Protein CYPRO4;","A0A5N5FHW9_9ROSA SubName: Full=Protein CYPRO4-like {ECO:0000313|EMBL:KAB2600792.1};","Protein involved in vacuole import and degradation","GO:0005737,cytoplasm; GO:0005635,nuclear envelope; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0005634,nucleus; GO:0012505,endomembrane system; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF08553.13:VID27 C-terminal WD40-like domain","--","--","--"]
["MS01G06710",0.5917,0.4338,0.5808,1.0888,0.7552,1.8152,1.0791,1.3143,1.3854,1.2617,1.2762,0.7645,1.4791,0.7852,0.7837,26,19,25,35,29,67,36,41,55,45,48,34,51,27,27,1.222572438,0.001958725,0.005155632,"up",1.223410402,0.004391122,0.009044671,"up",1.387753183,0.001445805,0.003289394,"up",1.517070999,"2.19823E-05","6.78677E-05","up",0.308024506,0.385815887,0.53862909,false,0.310335894,0.422982094,0.615252745,false,0.129776722,0.7379194,0.935107089,false,0.177463995,0.680414485,0.815423058,false,0.188526459,0.676605211,0.863693293,false,"chr_001",5892579,5894989,"-","MS01G06710","--","K20890 xylan alpha-glucuronosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like isoform X1 (A)","--","UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like isoform X1 [Malus domestica]","GUX2_ARATH RecName: Full=UDP-glucuronate:xylan alpha-glucuronosyltransferase 2; Short=UDP-GlcA:xylan glucuronyltransferase 2; EC=2.4.1.-; AltName: Full=Glycogenin-like protein 2; AltName: Full=Plant glycogenin-like starch initiation protein 3; AltName: Full=Protein GLUCURONIC ACID SUBSTITUTION OF XYLAN 2; Short=AtGUX2;","A0A498HT72_MALDO RecName: Full=Hexosyltransferase {ECO:0000256|RuleBase:RU362027}; EC=2.4.1.- {ECO:0000256|RuleBase:RU362027};","Glycosyl transferase, family 8 - glycogenin","GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0015020,glucuronosyltransferase activity; GO:0080116,glucuronoxylan glucuronosyltransferase activity; GO:0016757,glycosyltransferase activity; GO:0046872,metal ion binding; GO:0071555,cell wall organization; GO:0010417,glucuronoxylan biosynthetic process; GO:0009834,plant-type secondary cell wall biogenesis; GO:0045492,xylan biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016758,hexosyltransferase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010410,hemicellulose metabolic process; GO:0010413,glucuronoxylan metabolic process; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0042546,cell wall biogenesis; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044038,cell wall macromolecule biosynthetic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0045491,xylan metabolic process; GO:0070589,cellular component macromolecule biosynthetic process; GO:0070592,cell wall polysaccharide biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0009832,plant-type cell wall biogenesis; GO:0071669,plant-type cell wall organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane","PF01501.23:Glycosyl transferase family 8","--","--","--"]
["MS01G06720",11.6802,10.6968,11.2885,18.5954,17.6376,21.6826,17.918,11.2341,17.624,18.8147,22.9304,22.3552,17.0112,23.1308,17.8919,413,377,391,481,545,644,481,282,563,540,694,800,472,640,496,1.113319328,"1.38304E-16","2.4155E-15","up",1.076265246,"1.60015E-10","1.01467E-09","up",0.993933753,"6.12063E-12","4.77499E-11",false,0.754848654,0.000358528,0.000900863,false,-0.345293553,0.104001727,0.203266345,false,-0.306399798,0.179683436,0.353956415,false,-0.241040806,0.266347267,0.718142211,false,-0.102451341,0.479771177,0.663370163,false,-0.057504584,0.74661244,0.897913204,false,"chr_001",5896408,5899844,"-","MS01G06720","--","--","--","protein TIC 22 [Pyrus ussuriensis x Pyrus communis]","TIC22_ARATH RecName: Full=Protein TIC 22, chloroplastic; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 22; Short=AtTIC22; Flags: Precursor;","A0A5N5FCV6_9ROSA SubName: Full=Protein TIC 22 {ECO:0000313|EMBL:KAB2600797.1};","--","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0031972,chloroplast intermembrane space; GO:0005886,plasma membrane; GO:0009536,plastid; GO:0015031,protein transport; GO:0006810,transport; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009529,plastid intermembrane space; GO:0031970,organelle envelope lumen; GO:0031974,membrane-enclosed lumen; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0016020,membrane; GO:0071944,cell periphery","PF04278.15:Tic22-like family","--","--","--"]
["MS01G06750",30.8562,41.7122,53.3567,55.8382,49.5576,55.7158,37.3629,29.3041,39.0953,64.6917,70.7499,73.9698,55.0741,88.6453,79.3718,1016,1369,1721,1345,1426,1541,934,685,1163,1729,1994,2465,1423,2284,2049,0.924083077,"4.59949E-06","2.13107E-05",false,1.11865328,"1.57139E-06","5.96429E-06","up",0.573611747,0.007130574,0.014069374,false,0.034273396,0.876177509,0.906077145,false,-0.877140022,"5.0401E-09","7.30082E-08",false,-1.069520027,"3.82559E-07","7.73872E-06","down",-0.541256986,0.000545596,0.042181549,false,-0.333683571,0.0045109,0.021242688,false,-0.520162142,0.009073397,0.067389183,false,"chr_001",5981301,5982708,"-","MS01G06750","--","K14499 BRI1 kinase inhibitor 1 | (RefSeq) BRI1 kinase inhibitor 1-like (A)","ko04075: Plant hormone signal transduction","BRI1 kinase inhibitor 1-like [Malus domestica]","BKI1_ARATH RecName: Full=BRI1 kinase inhibitor 1;","A0A540N648_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE06033.1};","--","GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0046982,protein heterodimerization activity; GO:0004860,protein kinase inhibitor activity; GO:0009742,brassinosteroid mediated signaling pathway; GO:0006629,lipid metabolic process; GO:0010423,negative regulation of brassinosteroid biosynthetic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0046983,protein dimerization activity; GO:0004857,enzyme inhibitor activity; GO:0019207,kinase regulator activity; GO:0019210,kinase inhibitor activity; GO:0019887,protein kinase regulator activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009741,response to brassinosteroid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0014070,response to organic cyclic compound; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0043401,steroid hormone mediated signaling pathway; GO:0048545,response to steroid hormone; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071367,cellular response to brassinosteroid stimulus; GO:0071383,cellular response to steroid hormone stimulus; GO:0071396,cellular response to lipid; GO:0071407,cellular response to organic cyclic compound; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006694,steroid biosynthetic process; GO:0008202,steroid metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0010422,regulation of brassinosteroid biosynthetic process; GO:0010817,regulation of hormone levels; GO:0010894,negative regulation of steroid biosynthetic process; GO:0016128,phytosteroid metabolic process; GO:0016129,phytosteroid biosynthetic process; GO:0016131,brassinosteroid metabolic process; GO:0016132,brassinosteroid biosynthetic process; GO:0019216,regulation of lipid metabolic process; GO:0019218,regulation of steroid metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032350,regulation of hormone metabolic process; GO:0032351,negative regulation of hormone metabolic process; GO:0032353,negative regulation of hormone biosynthetic process; GO:0042445,hormone metabolic process; GO:0042446,hormone biosynthetic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0045833,negative regulation of lipid metabolic process; GO:0045939,negative regulation of steroid metabolic process; GO:0046885,regulation of hormone biosynthetic process; GO:0046890,regulation of lipid biosynthetic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050810,regulation of steroid biosynthetic process; GO:0051055,negative regulation of lipid biosynthetic process; GO:0065008,regulation of biological quality; GO:0080090,regulation of primary metabolic process; GO:0090030,regulation of steroid hormone biosynthetic process; GO:0090032,negative regulation of steroid hormone biosynthetic process; GO:0120178,steroid hormone biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery","--","--","--","--"]
["MS01G06760",26.6431,29.3429,27.3728,10.8269,9.0389,11.9452,5.4834,3.9996,5.3168,6.5227,5.8114,6.6868,5.9309,7.148,7.1887,1248,1370,1256,371,370,470,195,133,225,248,233,317,218,262,264,-1.942881333,"4.66514E-41","4.22882E-39","down",-1.749439132,"3.04187E-35","1.20763E-33","down",-1.180353737,"1.99808E-15","2.23404E-14","down",-2.210777319,"1.71267E-38","6.70422E-37","down",-0.254913223,0.206217942,0.341903161,false,-0.446069184,0.025359179,0.086948898,false,-1.032198179,"1.39414E-07",0.000110491,"down",0.780045892,"8.22831E-06",0.000104555,false,0.593854944,0.000589625,0.00892798,false,"chr_001",5987646,5992158,"-","MS01G06760","--","K17506 protein phosphatase 1L [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 59 isoform X1 (A)","--","hypothetical protein C1H46_008344 [Malus baccata]","P2C12_ARATH RecName: Full=Probable protein phosphatase 2C 12; Short=AtPP2C12; EC=3.1.3.16;","A0A540N4S1_MALBA RecName: Full=PPM-type phosphatase domain-containing protein {ECO:0000259|PROSITE:PS51746};","Serine/threonine protein phosphatase","GO:0046872,metal ion binding; GO:0017018,myosin phosphatase activity; GO:0004722,protein serine/threonine phosphatase activity; GO:0035970,peptidyl-threonine dephosphorylation; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0004721,phosphoprotein phosphatase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006470,protein dephosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016311,dephosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF00481.24:Protein phosphatase 2C","--","--","--"]
["MS01G06780",2.9526,3.2175,2.9102,1.9485,1.8641,0.9697,2.0786,1.721,1.6341,0.7526,2.3195,2.2635,0.7785,1.0409,1.5583,58,63,56,28,32,16,31,24,29,12,39,45,12,16,24,-0.586749536,0.160916836,0.237822126,false,-1.137868744,0.002736818,0.005905282,"down",-0.705070876,0.070939,0.108519802,false,-0.460602849,0.160560027,0.222315033,false,0.142784147,0.768981929,0.854239339,false,0.694603383,0.119606265,0.267918421,false,0.241477627,0.589327496,0.887515429,false,-0.092633075,0.866524811,0.929069338,false,0.461949528,0.366815953,0.653578333,false,"chr_001",6007859,6010401,"-","MS01G06780","--","--","--","B3 domain-containing protein At3g19184-like isoform X1 [Malus domestica]","Y3918_ARATH RecName: Full=B3 domain-containing protein At3g19184;","A0A5N5GYA3_9ROSA SubName: Full=B3 domain-containing protein {ECO:0000313|EMBL:KAB2620606.1};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02362.24:B3 DNA binding domain","B3","TF","B3->B3"]
["MS01G06790",15.4097,18.8007,21.1933,34.6264,27.7247,33.9836,28.4345,20.7357,23.8944,24.445,30.4523,29.8164,29.1783,33.369,29.6141,671,816,904,1103,1055,1243,940,641,940,864,1135,1314,997,1137,1011,0.798586075,"5.3191E-07","2.88307E-06",false,1.028854308,"2.06915E-11","1.44075E-10","up",1.012192972,"4.08203E-09","2.27266E-08","up",0.686401698,0.000327237,0.000828254,false,-0.100723896,0.56495195,0.699411332,false,-0.328197985,0.053954665,0.151983658,false,-0.328509889,0.067229908,0.455461624,false,0.22985781,0.123943226,0.268484998,false,0.00818194,0.954517484,0.985451367,false,"chr_001",6011419,6015486,"-","MS01G06790","--","--","--","uncharacterized protein LOC103455976 [Malus domestica]","--","A0A5N5GZU1_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2620607.1};","Uncharacterized conserved protein","GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0000808,origin recognition complex; GO:0006260,DNA replication; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005694,chromosome; GO:0032991,protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle","PF05705.17:Eukaryotic protein of unknown function (DUF829)","--","--","--"]
["MS01G06840",19.3996,19.979,26.3177,14.7717,10.599,14.6411,9.3535,5.8712,7.7461,13.0594,18.7567,19.9308,13.7709,24.66,13.1923,377,387,501,210,180,239,138,81,136,206,312,392,210,375,201,-0.158901896,0.446222353,0.546401888,false,-0.054491898,0.837667517,0.874405762,false,-0.5036004,0.016826237,0.030371246,false,-1.228303261,"1.54268E-07","6.48231E-07","down",-1.057452004,"3.3075E-05",0.000215439,"down",-1.160567681,0.000163042,0.001469662,"down",-0.727184789,0.003657961,0.118756208,false,-0.328102696,0.150478541,0.306842099,false,-0.424375382,0.143621892,0.398316135,false,"chr_001",6043360,6044305,"+","MS01G06840","--","--","--","uncharacterized protein LOC103957032 [Pyrus x bretschneideri]","--","A0A540N4R6_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE06042.1};","--","--","--","--","--","--"]
["MS01G06900",15.2012,16.5521,14.7836,6.948,7.1387,7.0759,6.0891,5.8307,7.2185,4.5911,4.1057,4.5211,4.4034,4.7925,4.6329,1289,1399,1228,431,529,504,392,351,553,316,298,388,293,318,308,-1.627775747,"2.67295E-29","1.28855E-27","down",-1.45954744,"8.3786E-28","2.15762E-26","down",-0.921929724,"3.31956E-11","2.39063E-10",false,-1.001570823,"4.32413E-12","3.0894E-11","down",0.639994369,"8.16746E-05",0.000480839,false,0.474173814,0.002172446,0.012584908,false,-0.081437476,0.604087709,0.893024763,false,0.724069075,"5.28082E-06","7.10795E-05",false,0.563411786,0.000141578,0.002898883,false,"chr_001",6237166,6244718,"-","MS01G06900","--","--","--","hypothetical protein DVH24_012421 [Malus domestica]","--","A0A498HTC7_MALDO RecName: Full=Metallophos domain-containing protein {ECO:0000259|Pfam:PF00149};","--","GO:0016021,integral component of membrane; GO:0016787,hydrolase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00149.31:Calcineurin-like phosphoesterase","--","--","--"]
["MS01G06950",8.0477,5.6695,8.5245,0.9311,0.9238,2.4327,0.5981,0.7463,0.8936,4.5999,10.7874,7.9019,3.8258,6.7059,3.6683,319,224,331,27,32,81,18,21,32,148,366,317,119,208,114,0.24095705,0.424360547,0.524390672,false,-0.355593381,0.208042104,0.276948784,false,-2.174863598,"1.47485E-08","7.58459E-08","down",-3.024726098,"2.11211E-24","3.82675E-23","down",-3.256867807,"7.72143E-19","3.82784E-17","down",-2.655815432,"8.91798E-14","6.688E-12","down",-0.85106081,0.079589018,0.486769906,false,-2.403818492,"2.82911E-08","6.84072E-07","down",-1.796497674,"2.25771E-05",0.000660816,"down","chr_001",6327066,6330757,"+","MS01G06950","--","--","--","hypothetical protein DVH24_012415 [Malus domestica]","--","A0A498HUA1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72731.1};","--","--","PF04784.17:Protein of unknown function, DUF547","--","--","--"]
["MS01G06960",1.7118,1.9868,2.7069,3.9917,9.9477,3.5563,8.9748,18.959,7.1331,8.4356,2.941,4.3114,4.1063,3.9033,3.168,51,59,79,87,259,89,203,401,192,204,75,130,96,91,74,1.503640727,0.000402397,0.001257665,"up",1.101551176,"6.48959E-05",0.000190049,"up",1.692641927,0.000192528,0.000518128,"up",2.753924403,"3.05454E-12","2.21695E-11","up",1.26378603,0.00884385,0.027835833,"up",1.663755298,"1.08277E-05",0.000144961,"up",1.052816763,0.037574424,0.362037849,false,0.212020484,0.687200365,0.819783021,false,0.621544875,0.15243951,0.411663907,false,"chr_001",6344193,6345466,"+","MS01G06960","--","--","--","hypothetical protein DVH24_012414 [Malus domestica]","--","A0A498HPQ2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72730.1};","--","--","PF07816.14:Protein of unknown function (DUF1645)","--","--","--"]
["MS01G06970",44.1576,46.4953,40.9394,30.9515,31.3188,35.8272,24.8164,24.8802,22.1015,55.6241,56.0306,58.0747,48.8127,52.6257,62.5231,2625,2755,2384,1346,1627,1789,1120,1050,1187,2684,2851,3494,2277,2448,2914,0.553440272,"2.97966E-06","1.42687E-05",false,0.606744092,"1.7038E-05","5.49761E-05",false,-0.212362544,0.104691392,0.152695025,false,-0.589523983,"8.30851E-05",0.000233121,false,-1.130445366,"4.09578E-17","1.69391E-15","down",-1.181656183,"3.45943E-14","2.73522E-12","down",-0.379746399,0.009320698,0.195458227,false,-0.748043902,"1.0485E-10","4.23772E-09",false,-0.793961281,"7.01105E-08","4.94484E-06",false,"chr_001",6355458,6361100,"-","MS01G06970","--","K01303 acylaminoacyl-peptidase [EC:3.4.19.1] | (RefSeq) acylamino-acid-releasing enzyme-like (A)","--","hypothetical protein DVH24_012412 [Malus domestica]","AARE2_ORYSJ RecName: Full=Acylamino-acid-releasing enzyme 2 {ECO:0000305}; Short=AARE2 {ECO:0000305}; EC=3.4.19.1 {ECO:0000305};","A0A498HMK1_MALDO RecName: Full=Peptidase_S9 domain-containing protein {ECO:0000259|Pfam:PF00326};","Dipeptidyl aminopeptidase","GO:0005737,cytoplasm; GO:0004252,serine-type endopeptidase activity; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0016787,hydrolase activity; GO:0017171,serine hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF00326.24:Prolyl oligopeptidase family","--","--","--"]
["MS01G06980",3.364,3.2776,2.8397,0.7517,0.111,0.3851,0.1704,0.6379,1.3605,0.9165,0.9447,0.6072,0.8244,0.6614,0.3301,104,101,86,17,3,10,4,14,38,23,25,19,20,16,8,-1.768210306,"4.24063E-08","2.74272E-07","down",-2.090712625,"3.32478E-08","1.59215E-07","down",-2.748257973,"7.2262E-08","3.34743E-07","down",-1.851568233,0.000495806,0.001216413,"down",-0.083829223,0.90231944,0.941357647,false,0.250216994,0.731123516,0.847926786,false,"NA","NA","NA","NA",-0.967418414,0.157724694,0.316889439,false,"NA","NA","NA","NA","chr_001",6371281,6372602,"+","MS01G06980","--","--","--","protein MIZU-KUSSEI 1-like [Malus domestica]","MIZ1_ARATH RecName: Full=Protein MIZU-KUSSEI 1;","A0A540KG71_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD73226.1};","--","GO:0032541,cortical endoplasmic reticulum; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0016020,membrane; GO:0009658,chloroplast organization; GO:0010274,hydrotropism; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0009605,response to external stimulus; GO:0009606,tropism; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005938,cell cortex; GO:0012505,endomembrane system; GO:0031984,organelle subcompartment; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0071782,endoplasmic reticulum tubular network; GO:0071944,cell periphery; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity; GO:0031090,organelle membrane; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network","PF04759.16:Protein of unknown function, DUF617","--","--","--"]
["MS01G06990",2.3334,3.4097,3.1587,0.4854,0.2902,0.3019,0.4677,0.786,0.0561,2.8747,0.4741,0.5012,0.5818,0.7779,0.7117,46,67,61,7,5,5,7,11,1,46,8,10,9,12,11,-0.994138109,0.1426164,0.215060445,false,-1.81068976,"1.5822E-05","5.12934E-05","down",-2.847873052,"2.37495E-08","1.18493E-07","down",-2.505896759,"6.25241E-05",0.000179528,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",6381212,6382054,"+","MS01G06990","--","K09422 transcription factor MYB, plant | (RefSeq) MYB5; transcription factor MYB44-like (A)","--","transcription factor MYB73-like [Malus domestica]","MYB73_ARATH RecName: Full=Transcription factor MYB73 {ECO:0000303|PubMed:11597504}; AltName: Full=Myb-related protein 73 {ECO:0000303|PubMed:11597504}; Short=AtMYB73 {ECO:0000303|PubMed:11597504};","A0A498HR11_MALDO SubName: Full=MYB domain class transcription factor {ECO:0000313|EMBL:AUZ96361.1};","Transcription factor, Myb superfamily","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0019760,glucosinolate metabolic process; GO:1901001,negative regulation of response to salt stress; GO:0010929,positive regulation of auxin mediated signaling pathway; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0000977,RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000987,cis-regulatory region sequence-specific DNA binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006082,organic acid metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016143,S-glycoside metabolic process; GO:0019748,secondary metabolic process; GO:0019757,glycosinolate metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901657,glycosyl compound metabolic process; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0009628,response to abiotic stimulus; GO:0009651,response to salt stress; GO:0047484,regulation of response to osmotic stress; GO:0048519,negative regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:1901000,regulation of response to salt stress; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009733,response to auxin; GO:0009734,auxin-activated signaling pathway; GO:0009755,hormone-mediated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009967,positive regulation of signal transduction; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0010647,positive regulation of cell communication; GO:0010928,regulation of auxin mediated signaling pathway; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0023056,positive regulation of signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0048584,positive regulation of response to stimulus; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","MYB","TF","MYB->MYB"]
["MS01G07010",7.2904,10.3971,16.3864,60.4647,42.6846,54.5655,64.9798,34.5378,41.2157,46.1163,49.1557,57.3364,49.2858,59.3257,53.4573,223,317,491,1353,1141,1402,1509,750,1139,1145,1287,1775,1183,1420,1282,2.356228942,"2.66181E-18","5.44353E-17","up",2.549287597,"3.39529E-23","6.35933E-22","up",2.429596669,"7.31814E-17","9.31928E-16","up",2.342394424,"7.98323E-13","6.14651E-12","up",-0.003871288,0.988002243,0.993739526,false,-0.194561481,0.43321276,0.62445114,false,-0.091983902,0.733526974,0.933099909,false,0.08972125,0.608869148,0.764766087,false,-0.095360895,0.57475546,0.805719792,false,"chr_001",6389964,6392719,"+","MS01G07010","--","--","--","uncharacterized protein LOC103400174 [Malus domestica]","--","A0A498HU95_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72721.1};","--","--","--","--","--","--"]
["MS01G07030",0.8701,1.2471,0.6345,0.793,1.0905,0.9372,1.419,1.2841,2.2473,0.8168,0.3873,0.4504,0.7393,1.5356,1.4798,21,30,15,14,23,19,26,22,49,16,8,11,14,29,28,"NA","NA","NA","NA",0.731435621,0.129130512,0.183204185,false,0.252843607,0.604248453,0.673306065,false,1.123703117,0.012342427,0.023021142,"up",1.691500521,0.000963618,0.004192453,"up",0.409972918,0.357802544,0.554600424,false,0.870561709,0.046115413,0.389314893,false,"NA","NA","NA","NA",-0.452739771,0.341778267,0.631044367,false,"chr_001",6420377,6422707,"-","MS01G07030","--","K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1] | (RefSeq) uncharacterized protein LOC103435646 (A)","ko03050: Proteasome","hypothetical protein DVH24_012402 [Malus domestica]","WAK2_ARATH RecName: Full=Wall-associated receptor kinase 2; EC=2.7.11.-; Flags: Precursor;","A0A498HMJ2_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0005509,calcium ion binding; GO:0030247,polysaccharide binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0007166,cell surface receptor signaling pathway; GO:0009992,cellular water homeostasis; GO:0009311,oligosaccharide metabolic process; GO:0006468,protein phosphorylation; GO:0009751,response to salicylic acid; GO:0009826,unidimensional cell growth; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0030246,carbohydrate binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0006884,cell volume homeostasis; GO:0008361,regulation of cell size; GO:0016043,cellular component organization; GO:0019725,cellular homeostasis; GO:0030104,water homeostasis; GO:0032535,regulation of cellular component size; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0055082,cellular chemical homeostasis; GO:0065008,regulation of biological quality; GO:0071840,cellular component organization or biogenesis; GO:0090066,regulation of anatomical structure size; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0010033,response to organic substance; GO:0014070,response to organic cyclic compound; GO:0042221,response to chemical; GO:1901700,response to oxygen-containing compound; GO:0000902,cell morphogenesis; GO:0009653,anatomical structure morphogenesis; GO:0016049,cell growth; GO:0032502,developmental process; GO:0040007,growth; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0060560,developmental growth involved in morphogenesis; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0071944,cell periphery","PF13947.9:Wall-associated receptor kinase galacturonan-binding","--","--","--"]
["MS01G07040",8.3585,7.6123,9.3196,18.9527,14.9581,16.4927,17.479,14.3488,14.9441,11.2879,12.5441,13.7646,13.3462,11.4556,11.1948,759,689,829,1259,1187,1258,1205,925,1226,832,975,1265,951,814,797,0.759092385,"4.05406E-08","2.63127E-07",false,0.805141373,"1.015E-07","4.55209E-07",false,1.210260419,"3.2573E-14","3.23622E-13","up",1.173789638,"1.44552E-13","1.1949E-12","up",0.426759443,0.005610565,0.018993411,false,0.383070767,0.02048518,0.073726933,false,-0.039073719,0.816937943,0.955485305,false,0.468433054,0.002565128,0.013502001,false,0.430302408,0.009688579,0.070700841,false,"chr_001",6425382,6434779,"-","MS01G07040","--","--","--","phospholipase SGR2-like isoform X1 [Malus domestica]","SHGR2_ARATH RecName: Full=Phospholipase SGR2; EC=3.1.1.-; AltName: Full=Protein SHOOT GRAVITROPISM 2;","A0A5N5GXN8_9ROSA SubName: Full=Phospholipase SGR2-like {ECO:0000313|EMBL:KAB2619343.1};","Phosphatidic acid-preferring phospholipase A1, contains DDHD domain","GO:0005737,cytoplasm; GO:0009705,plant-type vacuole membrane; GO:0009506,plasmodesma; GO:0005773,vacuole; GO:0046872,metal ion binding; GO:0008970,phospholipase A1 activity; GO:0004620,phospholipase activity; GO:0009660,amyloplast organization; GO:0009590,detection of gravity; GO:0016042,lipid catabolic process; GO:0009959,negative gravitropism; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016298,lipase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0052689,carboxylic ester hydrolase activity; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0009581,detection of external stimulus; GO:0009582,detection of abiotic stimulus; GO:0009605,response to external stimulus; GO:0009628,response to abiotic stimulus; GO:0009629,response to gravity; GO:0050896,response to stimulus; GO:0051606,detection of stimulus; GO:0006629,lipid metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0009606,tropism; GO:0009630,gravitropism; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0000325,plant-type vacuole; GO:0005774,vacuolar membrane; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF02862.20:DDHD domain","--","--","--"]
["MS01G07070",16.4968,11.0627,10.7027,2.2551,11.699,2.274,4.546,7.2464,3.6039,10.8304,3.88,3.2814,2.6002,2.5243,7.0599,760,508,483,76,471,88,159,237,150,405,153,153,94,91,255,-0.879805199,0.046067498,0.08231094,false,-1.368833289,0.000307953,0.000799438,"down",-0.990072085,0.232030855,0.303498641,false,-1.025969551,0.001184976,0.002716159,"down",-0.129959882,0.790089687,0.868866913,false,0.357805076,0.40752936,0.602650995,false,-0.046509627,0.940307278,0.985261316,false,-0.086060124,0.929026157,0.964074777,false,0.410851559,0.658009624,0.853792283,false,"chr_001",6450513,6454489,"-","MS01G07070","--","--","--","putative lipase C4A8.10 [Malus sylvestris]","--","A0A498HT21_MALDO RecName: Full=DUF676 domain-containing protein {ECO:0000259|Pfam:PF05057};","Predicted alpha/beta hydrolase","--","PF05057.17:Putative serine esterase (DUF676)","--","--","--"]
["MS01G07080",2.5367,2.8479,2.4457,0.2202,0.0691,0.1917,0.0796,0.0851,0.0669,0.5705,0.541,0.5769,0.1796,0.3602,0.1541,126,141,119,8,3,8,3,3,3,23,23,29,7,14,6,-2.027412925,"5.52785E-13","6.6512E-12","down",-3.206355493,"2.42016E-16","2.72528E-15","down",-3.842250505,"1.9562E-18","2.88166E-17","down",-4.814991438,"3.51071E-18","4.19621E-17","down",-2.770200777,"3.76185E-05",0.000241653,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.794405156,0.002371082,0.012662043,"down","NA","NA","NA","NA","chr_001",6455521,6458939,"+","MS01G07080","--","K03093 RNA polymerase sigma factor | (RefSeq) RNA polymerase sigma factor sigC isoform X1 (A)","--","RNA polymerase sigma factor sigC isoform X1 [Malus domestica]","SIGC_ARATH RecName: Full=RNA polymerase sigma factor sigC; Short=Sigma factor C; Short=Sigma-C; AltName: Full=RNA polymerase sigma factor sig3; Short=Atsig3; Short=Sigma factor 3; Flags: Precursor;","A0A5N5GVL6_9ROSA SubName: Full=RNA polymerase sigma factor sigC-like {ECO:0000313|EMBL:KAB2619338.1};","--","GO:0009507,chloroplast; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0016987,sigma factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0071482,cellular response to light stimulus; GO:0006352,DNA-templated transcription initiation; GO:2001141,regulation of RNA biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034062,5'-3' RNA polymerase activity; GO:0097747,RNA polymerase activity; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0003700,DNA-binding transcription factor activity; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071478,cellular response to radiation; GO:0104004,cellular response to environmental stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010556,regulation of macromolecule biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0080090,regulation of primary metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF04545.19:Sigma-70, region 4","--","--","--"]
["MS01G07100",2.3704,2.7586,1.0647,0.0648,0.0542,0,0.2498,0.3339,0.0525,0.3504,0.2769,0.2811,0.2417,0.3635,0,50,58,22,1,1,0,4,5,1,6,5,6,4,6,0,-2.593626301,"1.60921E-05","6.66951E-05","down",-3.069336424,"3.86019E-05",0.000117436,"down",-5.519612324,"2.25449E-06","8.42351E-06","down",-3.04609797,"2.83755E-05","8.60522E-05","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",6471185,6473566,"+","MS01G07100","--","K08850 aurora kinase, other [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase Aurora-1 isoform X1 (A)","--","serine/threonine-protein kinase Aurora-1 isoform X2 [Malus domestica]","AUR1_ARATH RecName: Full=Serine/threonine-protein kinase Aurora-1; Short=AtAur1; EC=2.7.11.1; AltName: Full=Aurora-like kinase 1;","A0A540L7Z8_MALBA RecName: Full=Aurora kinase {ECO:0000256|RuleBase:RU367134}; EC=2.7.11.1 {ECO:0000256|RuleBase:RU367134};","Serine/threonine protein kinase","GO:0009504,cell plate; GO:0032133,chromosome passenger complex; GO:0005874,microtubule; GO:0031965,nuclear membrane; GO:0005730,nucleolus; GO:0005634,nucleus; GO:0009524,phragmoplast; GO:0005819,spindle; GO:0005876,spindle microtubule; GO:0051233,spindle midzone; GO:0000922,spindle pole; GO:0005524,ATP binding; GO:0035175,histone kinase activity (H3-S10 specific); GO:0035174,histone serine kinase activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0051301,cell division; GO:0016572,NA; GO:0007052,mitotic spindle organization; GO:0032465,regulation of cytokinesis; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0035173,histone kinase activity; GO:0140096,catalytic activity, acting on a protein; GO:0008150,biological_process; GO:0009987,cellular process; GO:0000226,microtubule cytoskeleton organization; GO:0000278,mitotic cell cycle; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0007017,microtubule-based process; GO:0007049,cell cycle; GO:0007051,spindle organization; GO:0016043,cellular component organization; GO:0022402,cell cycle process; GO:0071840,cellular component organization or biogenesis; GO:1902850,microtubule cytoskeleton organization involved in mitosis; GO:1903047,mitotic cell cycle process; GO:0000910,cytokinesis; GO:0010564,regulation of cell cycle process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051302,regulation of cell division; GO:0051726,regulation of cell cycle; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0005856,cytoskeleton; GO:0005875,microtubule associated complex; GO:0015630,microtubule cytoskeleton; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0099080,supramolecular complex; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber; GO:0005635,nuclear envelope; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G07110",25.3245,22.8438,25.8017,7.561,8.6852,6.2896,7.1549,9.2237,4.9692,11.3063,10.461,11.6657,6.9223,6.8784,9.0481,1021,918,1019,223,306,213,219,264,181,370,361,476,219,217,286,-0.956576383,"4.72402E-12","5.14178E-11",false,-1.403260594,"5.07786E-18","6.61892E-17","down",-1.492288775,"3.70364E-14","3.66135E-13","down",-1.501977196,"2.4368E-09","1.29014E-08","down",-0.53360882,0.045790195,0.106887688,false,-0.085159583,0.757286257,0.864061408,false,-0.013948421,0.963444619,0.990195997,false,-0.516849069,0.016101869,0.058454056,false,-0.06250856,0.789598136,0.919108969,false,"chr_001",6473949,6477499,"-","MS01G07110","--","K00850 6-phosphofructokinase 1 [EC:2.7.1.11] | (RefSeq) ATP-dependent 6-phosphofructokinase 6-like (A)","ko00010: Glycolysis / Gluconeogenesis; ko00030: Pentose phosphate pathway; ko00051: Fructose and mannose metabolism; ko00052: Galactose metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01200: Carbon metabolism; ko01230: Biosynthesis of amino acids; ko03018: RNA degradation","hypothetical protein DVH24_012392 [Malus domestica]","PFKA3_ARATH RecName: Full=ATP-dependent 6-phosphofructokinase 3 {ECO:0000255|HAMAP-Rule:MF_03186}; Short=ATP-PFK 3 {ECO:0000255|HAMAP-Rule:MF_03186}; Short=Phosphofructokinase 3 {ECO:0000255|HAMAP-Rule:MF_03186}; EC=2.7.1.11 {ECO:0000255|HAMAP-Rule:MF_03186}; AltName: Full=Phosphohexokinase 3 {ECO:0000255|HAMAP-Rule:MF_03186};","A0A498HMI2_MALDO RecName: Full=ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_03186}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_03186}; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_03186}; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_03186}; AltName: Full=Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_03186};","Pyrophosphate-dependent phosphofructo-1-kinase","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0003872,6-phosphofructokinase activity; GO:0005524,ATP binding; GO:0046872,metal ion binding; GO:0071456,cellular response to hypoxia; GO:0006002,fructose 6-phosphate metabolic process; GO:0006096,glycolytic process; GO:0010053,root epidermal cell differentiation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008443,phosphofructokinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0019200,carbohydrate kinase activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008152,metabolic process; GO:0019637,organophosphate metabolic process; GO:0044237,cellular metabolic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:0005975,carbohydrate metabolic process; GO:0006082,organic acid metabolic process; GO:0006090,pyruvate metabolic process; GO:0006091,generation of precursor metabolites and energy; GO:0006139,nucleobase-containing compound metabolic process; GO:0006163,purine nucleotide metabolic process; GO:0006165,nucleoside diphosphate phosphorylation; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006757,ATP generation from ADP; GO:0006807,nitrogen compound metabolic process; GO:0009056,catabolic process; GO:0009117,nucleotide metabolic process; GO:0009132,nucleoside diphosphate metabolic process; GO:0009135,purine nucleoside diphosphate metabolic process; GO:0009141,nucleoside triphosphate metabolic process; GO:0009144,purine nucleoside triphosphate metabolic process; GO:0009150,purine ribonucleotide metabolic process; GO:0009179,purine ribonucleoside diphosphate metabolic process; GO:0009185,ribonucleoside diphosphate metabolic process; GO:0009199,ribonucleoside triphosphate metabolic process; GO:0009205,purine ribonucleoside triphosphate metabolic process; GO:0009259,ribonucleotide metabolic process; GO:0016052,carbohydrate catabolic process; GO:0016310,phosphorylation; GO:0019693,ribose phosphate metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043436,oxoacid metabolic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0046031,ADP metabolic process; GO:0046034,ATP metabolic process; GO:0046483,heterocycle metabolic process; GO:0046939,nucleotide phosphorylation; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0072521,purine-containing compound metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901575,organic substance catabolic process; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0010015,root morphogenesis; GO:0022622,root system development; GO:0030154,cell differentiation; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048364,root development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0048869,cellular developmental process; GO:0090558,plant epidermis development; GO:0090627,plant epidermal cell differentiation; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF00365.23:Phosphofructokinase","--","--","--"]
["MS01G07150",9.5072,7.7365,10.1799,2.2527,2.9978,2.0121,2.3654,3.7795,3.2739,6.6632,5.9239,5.9077,3.9309,4.5359,5.4434,450,365,472,78,124,80,85,127,140,256,240,283,146,168,202,-0.378361052,0.035705044,0.066152026,false,-0.687564874,0.000366307,0.000937169,false,-1.691164356,"6.45768E-12","5.02609E-11","down",-1.258575216,"4.55138E-08","2.04444E-07","down",-0.86743667,0.000266308,0.001367699,false,-0.555208393,0.027067054,0.091423638,false,0.430264323,0.162683717,0.617588956,false,-1.294843821,"3.82423E-07","7.09069E-06","down",-0.97694464,0.000276676,0.00491597,false,"chr_001",6491469,6495564,"-","MS01G07150","--","--","--","endoribonuclease YBEY, chloroplastic-like [Malus sylvestris]","YBEY_ARATH RecName: Full=Endoribonuclease YBEY, chloroplastic {ECO:0000305}; EC=3.1.-.- {ECO:0000269|PubMed:25810095}; Flags: Precursor;","A0A5N5GZW1_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2619332.1};","--","GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0004521,endoribonuclease activity; GO:0046872,metal ion binding; GO:0004222,metalloendopeptidase activity; GO:0009658,chloroplast organization; GO:1901259,chloroplast rRNA processing; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004518,nuclease activity; GO:0004519,endonuclease activity; GO:0004540,ribonuclease activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008237,metallopeptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0006139,nucleobase-containing compound metabolic process; GO:0006364,rRNA processing; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016072,rRNA metabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0034470,ncRNA processing; GO:0034641,cellular nitrogen compound metabolic process; GO:0034660,ncRNA metabolic process; GO:0042254,ribosome biogenesis; GO:0043170,macromolecule metabolic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma","PF08282.15:haloacid dehalogenase-like hydrolase","--","--","--"]
["MS01G07200",51.339,68.1332,44.4276,21.4791,14.419,25.3632,12.2314,7.4134,16.1878,10.4116,14.071,13.2254,9.9636,9.7652,10.1015,2029,2684,1720,621,498,842,367,208,578,334,476,529,309,302,313,-1.940313315,"9.05941E-21","2.32795E-19","down",-2.168183481,"1.38835E-28","3.76909E-27","down",-1.218560494,"1.49925E-06","5.75397E-06","down",-1.92340878,"1.16536E-11","7.95534E-11","down",0.031948468,0.90848765,0.944843122,false,0.263596064,0.321644887,0.518754287,false,-0.703082829,0.020661789,0.281943291,false,0.737422898,0.001160189,0.007046273,false,0.97365961,"5.48117E-06",0.000202031,false,"chr_001",6523784,6526516,"-","MS01G07200","--","K14484 auxin-responsive protein IAA | (RefSeq) auxin-responsive protein IAA2-like isoform X1 (A)","ko04075: Plant hormone signal transduction","auxin [Malus zumi]","IAA26_ARATH RecName: Full=Auxin-responsive protein IAA26; AltName: Full=Indoleacetic acid-induced protein 26; AltName: Full=Phytochrome-associated protein 1;","A0A0R4XBZ1_9ROSA RecName: Full=Auxin-responsive protein {ECO:0000256|RuleBase:RU004549};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0042802,identical protein binding; GO:0009734,auxin-activated signaling pathway; GO:0009733,response to auxin; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0005515,protein binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02309.19:AUX/IAA family","AUX/IAA","TR","AUX/IAA"]
["MS01G07210",1.3557,2.6636,2.5373,0,0.2586,0.4035,0.0744,0.0796,0.0625,0.4176,3.0357,1.2279,0.3599,0.3609,0.1441,24,47,44,0,4,6,1,1,1,6,46,22,5,5,2,-0.322949337,0.609870556,0.697267954,false,-2.624341848,"3.1072E-05","9.61424E-05","down",-3.058194216,"3.02952E-05","9.38408E-05","down",-4.650294708,"1.86025E-06","6.74988E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",6528578,6530716,"-","MS01G07210","--","K14490 histidine-containing phosphotransfer peotein | (RefSeq) histidine-containing phosphotransfer protein 4-like (A)","ko04075: Plant hormone signal transduction","histidine-containing phosphotransfer protein 4-like [Malus sylvestris]","PHP5_ORYSJ RecName: Full=Pseudo histidine-containing phosphotransfer protein 5 {ECO:0000303|PubMed:17284581}; AltName: Full=OsHpt5 {ECO:0000303|PubMed:16891544};","A0A5N5GXL8_9ROSA RecName: Full=Histidine-containing phosphotransfer protein {ECO:0000256|RuleBase:RU369004};","Two-component phosphorelay intermediate involved in MAP kinase cascade regulation","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0009927,histidine phosphotransfer kinase activity; GO:0043424,protein histidine kinase binding; GO:0009736,cytokinin-activated signaling pathway; GO:0000160,phosphorelay signal transduction system; GO:0016310,phosphorylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0060089,molecular transducer activity; GO:0140096,catalytic activity, acting on a protein; GO:0005488,binding; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0019900,kinase binding; GO:0019901,protein kinase binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009735,response to cytokinin; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071368,cellular response to cytokinin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0035556,intracellular signal transduction; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008152,metabolic process; GO:0044237,cellular metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01627.26:Hpt domain","--","--","--"]
["MS01G07280",1.6164,1.1794,0.8251,2.7118,2.1019,1.312,2.9033,2.3804,1.6265,1.2672,0.515,1.7423,1.0299,0.845,1.7806,22,16,11,27,25,15,30,23,20,14,6,24,11,9,19,"NA","NA","NA","NA","NA","NA","NA","NA",0.971588064,0.066763741,0.102989528,false,1.211168466,0.015341048,0.028008357,"up",1.068669795,0.06184935,0.135814211,false,0.926259741,0.074051558,0.190307279,false,0.236429727,0.627400393,0.901849857,false,0.836723698,0.168644986,0.331687131,false,0.69777673,0.203083697,0.482447723,false,"chr_001",6589005,6594339,"+","MS01G07280","--","--","--","lachrymatory-factor synthase-like [Malus domestica]","LFS_ALLCE RecName: Full=Lachrymatory-factor synthase; Flags: Precursor;","A0A5N5I239_9ROSA SubName: Full=Lachrymatory-factor synthase-like {ECO:0000313|EMBL:KAB2629644.1};","--","GO:0005773,vacuole; GO:0043086,negative regulation of catalytic activity; GO:0008150,biological_process; GO:0044092,negative regulation of molecular function; GO:0050790,regulation of catalytic activity; GO:0065007,biological regulation; GO:0065009,regulation of molecular function; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF10604.12:Polyketide cyclase / dehydrase and lipid transport","--","--","--"]
["MS01G07290",22.0393,26.3554,28.3691,43.113,30.2347,30.6709,30.7315,25.4424,28.7408,58.6423,67.7449,59.9728,50.1676,55.3911,52.2797,870,1037,1097,1245,1043,1017,921,713,1025,1879,2289,2396,1554,1711,1618,1.466426578,"4.02523E-27","1.62722E-25","up",1.333927813,"2.03387E-23","3.86828E-22","up",0.656217446,0.001542312,0.003487914,false,0.431097446,0.006321288,0.012556474,false,-1.023479473,"7.68421E-14","2.20038E-12","down",-0.887966989,"6.66005E-11","3.04653E-09",false,-0.226864434,0.266412635,0.718142211,false,-0.79417101,"4.60695E-05",0.000467898,false,-0.653211505,0.000593236,0.008960934,false,"chr_001",6594607,6597494,"-","MS01G07290","--","K01054 acylglycerol lipase [EC:3.1.1.23] | (RefSeq) uncharacterized protein LOC103438266 (A)","ko00561: Glycerolipid metabolism; ko01100: Metabolic pathways","monoglyceride lipase-like [Malus domestica]","CSE_ARATH RecName: Full=Caffeoylshikimate esterase; EC=3.1.1.-; AltName: Full=Lysophospholipase 2; Short=LysoPL2;","A0A498HPM1_MALDO RecName: Full=Hydrolase_4 domain-containing protein {ECO:0000259|Pfam:PF12146};","Lysophospholipase","GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0016020,membrane; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0003846,2-acylglycerol O-acyltransferase activity; GO:0090430,caffeoyl-CoA: alcohol caffeoyl transferase activity; GO:0016787,hydrolase activity; GO:0016298,lipase activity; GO:0004622,lysophospholipase activity; GO:0009809,lignin biosynthetic process; GO:0046686,response to cadmium ion; GO:0042542,response to hydrogen peroxide; GO:0006979,response to oxidative stress; GO:0010043,response to zinc ion; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008374,O-acyltransferase activity; GO:0016411,acylglycerol O-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0016788,hydrolase activity, acting on ester bonds; GO:0004620,phospholipase activity; GO:0052689,carboxylic ester hydrolase activity; GO:0006725,cellular aromatic compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009698,phenylpropanoid metabolic process; GO:0009699,phenylpropanoid biosynthetic process; GO:0009808,lignin metabolic process; GO:0009987,cellular process; GO:0019438,aromatic compound biosynthetic process; GO:0019748,secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044550,secondary metabolite biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0000302,response to reactive oxygen species; GO:0006950,response to stress; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF12146.11:Serine aminopeptidase, S33","--","--","--"]
["MS01G07300",1.0573,1.1786,1.4391,3.1314,1.4787,2.5174,1.0058,0.0827,0.6502,2.6051,3.1567,4.0626,2.6199,3.9784,1.9479,18,20,24,39,22,36,13,1,10,36,46,70,35,53,26,1.609825569,"1.24746E-05","5.28434E-05","up",1.512020038,0.000292923,0.000763305,"up",1.16046511,0.008476416,0.016437405,"up","NA","NA","NA","NA",-2.376903569,"6.80645E-05",0.000410149,"down",-2.282029536,0.00030611,0.002493664,"down",-1.950500779,0.003651014,0.118726858,false,-0.432139585,0.27400595,0.460248929,false,-0.327695913,0.451468046,0.723424171,false,"chr_001",6608294,6609021,"+","MS01G07300","--","--","--","uncharacterized protein LOC103431439 [Malus domestica]","--","A0A5N5GZI5_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2619311.1};","--","--","PF07911.16:Protein of unknown function (DUF1677)","--","--","--"]
["MS01G07310",4.1606,1.2368,3.0675,0.8426,1.1462,1.009,0,0.1085,0.1706,22.7811,13.6821,15.4541,4.222,10.2401,11.4979,54,16,39,8,13,11,0,1,2,240,152,203,43,104,117,2.814263289,"1.30445E-11","1.34971E-10","up",1.900218368,"7.97753E-05",0.000230537,"up",-1.276428113,0.030190217,0.051070298,false,-4.597876774,"1.12287E-05","3.63496E-05","down",-7.383354983,"2.0702E-16","7.88284E-15","down",-6.474217749,"8.64229E-12","4.7641E-10","down","NA","NA","NA","NA",-4.068506715,"6.68603E-24","1.87917E-21","down",-3.151734458,"9.7738E-11","1.59825E-08","down","chr_001",6613868,6614422,"+","MS01G07310","--","--","--","hypothetical protein DVH24_012372 [Malus domestica]","--","A0A498HMG1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72688.1};","--","--","PF07911.16:Protein of unknown function (DUF1677)","--","--","--"]
["MS01G07320",11.0879,7.172,7.0744,5.3049,3.556,7.8332,5.1693,4.4595,7.0892,2.5343,3.5282,2.465,2.9747,3.617,3.5542,760,490,475,266,213,451,269,217,439,141,207,171,160,194,191,-1.393244287,"3.88612E-08","2.53061E-07","down",-1.033466878,"9.31204E-06","3.14702E-05","down",-0.406200072,0.19414211,0.260447547,false,-0.326731018,0.203940703,0.272501052,false,1.080260108,"8.11006E-06","6.13677E-05","up",0.724480471,0.000899457,0.006059074,false,0.081300935,0.784947665,0.94869907,false,1.000780449,0.000886071,0.005674951,"up",0.650239756,0.019735833,0.115335828,false,"chr_001",6623436,6626561,"+","MS01G07320","--","K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor protein kinase CLAVATA1 (A)","--","hypothetical protein DVH24_012371 [Malus domestica]","SKM1_ARATH RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase SKM1 {ECO:0000305}; EC=2.7.11.1 {ECO:0000305}; AltName: Full=Protein STERILITY-REGULATING KINASE MEMBER 1 {ECO:0000303|PubMed:23910659}; Flags: Precursor;","A0A498HT78_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0005783,endoplasmic reticulum; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0042277,peptide binding; GO:0001653,peptide receptor activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0080092,regulation of pollen tube growth; GO:0009266,response to temperature stimulus; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0033218,amide binding; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0000003,reproduction; GO:0000902,cell morphogenesis; GO:0000904,cell morphogenesis involved in differentiation; GO:0001558,regulation of cell growth; GO:0003006,developmental process involved in reproduction; GO:0009653,anatomical structure morphogenesis; GO:0009826,unidimensional cell growth; GO:0009856,pollination; GO:0009860,pollen tube growth; GO:0009932,cell tip growth; GO:0010769,regulation of cell morphogenesis involved in differentiation; GO:0016043,cellular component organization; GO:0016049,cell growth; GO:0022414,reproductive process; GO:0022603,regulation of anatomical structure morphogenesis; GO:0022604,regulation of cell morphogenesis; GO:0030154,cell differentiation; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0040007,growth; GO:0040008,regulation of growth; GO:0044706,multi-multicellular organism process; GO:0048468,cell development; GO:0048588,developmental cell growth; GO:0048589,developmental growth; GO:0048638,regulation of developmental growth; GO:0048856,anatomical structure development; GO:0048868,pollen tube development; GO:0048869,cellular developmental process; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0050794,regulation of cellular process; GO:0051128,regulation of cellular component organization; GO:0051239,regulation of multicellular organismal process; GO:0051510,regulation of unidimensional cell growth; GO:0060560,developmental growth involved in morphogenesis; GO:0065007,biological regulation; GO:0071840,cellular component organization or biogenesis; GO:2000241,regulation of reproductive process; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery","PF13855.9:Leucine rich repeat","--","--","--"]
["MS01G07340",4.0635,2.8347,2.3046,0.7167,0.5833,0.6589,0.3453,0.5539,0.4353,0.8433,0.9869,0.7771,0.7239,0.5956,0.836,279,194,155,36,35,38,18,27,27,47,58,54,39,32,45,-1.641239448,"3.31124E-08","2.1793E-07","down",-1.806968636,"5.68439E-09","3.00196E-08","down",-2.025836763,"2.53104E-10","1.64247E-09","down",-2.512588116,"5.27631E-13","4.12754E-12","down",-0.858272829,0.016932963,0.047596581,false,-0.689065117,0.07146304,0.185620116,false,-0.486618032,0.202800612,0.660630723,false,-0.368307005,0.246292847,0.428296683,false,-0.194418563,0.562769311,0.798302956,false,"chr_001",6635823,6643077,"-","MS01G07340","--","K09338 homeobox-leucine zipper protein | (RefSeq) BZIP18; homeobox-leucine zipper protein ATHB-8-like (A)","--","homeobox-leucine zipper protein ATHB-8-like [Malus domestica]","ATHB8_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-8; AltName: Full=HD-ZIP protein ATHB-8; AltName: Full=Homeodomain transcription factor ATHB-8;","D9ZIQ6_MALDO SubName: Full=BZIP domain class transcription factor {ECO:0000313|EMBL:ADL36609.1};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0008289,lipid binding; GO:0000976,transcription cis-regulatory region binding; GO:0030154,cell differentiation; GO:0010014,meristem initiation; GO:0045597,positive regulation of cell differentiation; GO:0008284,positive regulation of cell population proliferation; GO:0010072,primary shoot apical meristem specification; GO:0010067,procambium histogenesis; GO:0009733,response to auxin; GO:0010089,xylem development; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0009933,meristem structural organization; GO:0048507,meristem development; GO:0048532,anatomical structure arrangement; GO:0048856,anatomical structure development; GO:0045595,regulation of cell differentiation; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0050794,regulation of cellular process; GO:0051094,positive regulation of developmental process; GO:0065007,biological regulation; GO:0008283,cell population proliferation; GO:0042127,regulation of cell population proliferation; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0009793,embryo development ending in seed dormancy; GO:0010016,shoot system morphogenesis; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0048316,seed development; GO:0048367,shoot system development; GO:0048508,embryonic meristem development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0061458,reproductive system development; GO:0090421,embryonic meristem initiation; GO:0010065,primary meristem tissue development; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0010087,phloem or xylem histogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF01852.22:START domain","HB-HD-ZIP","TF","HB->HB-HD-ZIP"]
["MS01G07360",1.2748,1.4251,1.4129,0.4481,0.1667,0.2602,0.048,0.3591,0.3225,2.3783,1.8298,1.7635,0.5106,0.8844,0.511,35,39,38,9,4,6,1,7,8,53,43,49,11,19,11,0.72554843,0.024940399,0.048545233,false,-0.818346583,0.058706259,0.091819263,false,-2.045034234,0.000139128,0.000384244,"down",-2.211812295,0.000213053,0.000556334,"down",-2.925277702,"4.11116E-07","4.15297E-06","down","NA","NA","NA","NA","NA","NA","NA","NA",-2.757233129,"1.60329E-07","3.2771E-06","down","NA","NA","NA","NA","chr_001",6665441,6666869,"+","MS01G07360","--","--","--","GATA transcription factor 12 [Malus domestica]","GAT12_ARATH RecName: Full=GATA transcription factor 12 {ECO:0000303|PubMed:15084732};","A0A498HUW2_MALDO RecName: Full=GATA transcription factor {ECO:0000256|PIRNR:PIRNR016992};","GATA-4/5/6 transcription factors","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0008270,zinc ion binding; GO:0030154,cell differentiation; GO:0071555,cell wall organization; GO:0007623,circadian rhythm; GO:0045893,positive regulation of DNA-templated transcription; GO:0009416,response to light stimulus; GO:1905177,tracheary element differentiation; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0048511,rhythmic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009314,response to radiation; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00320.30:GATA zinc finger","C2C2-GATA","TF","C2C2->C2C2-GATA"]
["MS01G07370",4.7044,3.1464,4.5561,2.3085,1.8634,2.8721,0.8739,2.6336,2.0695,1.6347,2.6776,2.6221,1.5372,1.7727,1.2308,78,52,74,28,27,40,11,31,31,22,38,44,20,23,16,-0.652510053,0.053480632,0.093556318,false,-1.156699852,0.001496573,0.003400068,"down",-0.607932429,0.075233745,0.114233181,false,-0.873252786,0.044115751,0.071855659,false,-0.203419479,0.677937477,0.787981994,false,0.299766223,0.557698634,0.729046922,false,-0.262560205,0.586170122,0.886819087,false,0.06161565,0.873125949,0.932584204,false,0.573131081,0.158977056,0.421475469,false,"chr_001",6671901,6674431,"-","MS01G07370","--","--","--","hypothetical protein DVH24_012366 [Malus domestica]","NOXY2_ARATH RecName: Full=Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial {ECO:0000303|PubMed:17369372, ECO:0000303|PubMed:23370715}; Flags: Precursor;","A0A498HRU7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72682.1};","--","GO:0005739,mitochondrion; GO:0052543,callose deposition in cell wall; GO:0071433,cell wall repair; GO:0042742,defense response to bacterium; GO:0050832,defense response to fungus; GO:0010311,lateral root formation; GO:0019372,lipoxygenase pathway; GO:0048311,mitochondrion distribution; GO:0031407,oxylipin metabolic process; GO:2000023,regulation of lateral root development; GO:0010821,regulation of mitochondrion organization; GO:2000280,regulation of root development; GO:0009617,response to bacterium; GO:0009635,response to herbicide; GO:0048364,root development; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0033036,macromolecule localization; GO:0033037,polysaccharide localization; GO:0042545,cell wall modification; GO:0045229,external encapsulating structure organization; GO:0051179,localization; GO:0051641,cellular localization; GO:0052386,cell wall thickening; GO:0052545,callose localization; GO:0070727,cellular macromolecule localization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071840,cellular component organization or biogenesis; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0009620,response to fungus; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009791,post-embryonic development; GO:0010015,root morphogenesis; GO:0010101,post-embryonic root morphogenesis; GO:0010102,lateral root morphogenesis; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048527,lateral root development; GO:0048528,post-embryonic root development; GO:0048646,anatomical structure formation involved in morphogenesis; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0090696,post-embryonic plant organ development; GO:0090697,post-embryonic plant organ morphogenesis; GO:0090698,post-embryonic plant morphogenesis; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:1905393,plant organ formation; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006690,icosanoid metabolic process; GO:0008152,metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0006996,organelle organization; GO:0007005,mitochondrion organization; GO:0051640,organelle localization; GO:0051646,mitochondrion localization; GO:0048580,regulation of post-embryonic development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0065007,biological regulation; GO:2000026,regulation of multicellular organismal development; GO:2000069,regulation of post-embryonic root development; GO:0033043,regulation of organelle organization; GO:0050794,regulation of cellular process; GO:0051128,regulation of cellular component organization; GO:0009636,response to toxic substance; GO:0042221,response to chemical; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G07450",1.3043,2.2432,0.8559,0.7641,1.5991,3.3273,1.9634,3.2807,2.5779,1.2625,0.653,0.7364,1.3059,0.9524,0.713,14,24,9,6,15,30,16,25,25,11,6,8,11,8,6,"NA","NA","NA","NA","NA","NA","NA","NA",0.567353868,0.405250125,0.485699135,false,1.103813961,0.038805665,0.064215626,false,1.672863383,0.002996127,0.011145623,"up",1.397790409,0.010992497,0.045716168,"up",0.53412166,0.366284915,0.789176718,false,"NA","NA","NA","NA","NA","NA","NA","NA","chr_001",6699630,6708343,"+","MS01G07450","--","K10268 F-box and leucine-rich repeat protein 2/20 | (RefSeq) F-box/LRR-repeat protein 4-like (A)","--","F-box protein At3g58530-like [Malus sylvestris]","EBF2_ARATH RecName: Full=EIN3-binding F-box protein 2;","A0A498HT70_MALDO RecName: Full=F-box_5 domain-containing protein {ECO:0000259|Pfam:PF18511};","--","GO:0005634,nucleus; GO:0019005,SCF ubiquitin ligase complex; GO:0009873,ethylene-activated signaling pathway; GO:0010105,negative regulation of ethylene-activated signaling pathway; GO:0016567,protein ubiquitination; GO:0009723,response to ethylene; GO:0031146,SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0010104,regulation of ethylene-activated signaling pathway; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023057,negative regulation of signaling; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0070297,regulation of phosphorelay signal transduction system; GO:0070298,negative regulation of phosphorelay signal transduction system; GO:1902531,regulation of intracellular signal transduction; GO:1902532,negative regulation of intracellular signal transduction; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006508,proteolysis; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0010498,proteasomal protein catabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0000151,ubiquitin ligase complex; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0032991,protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF13516.9:Leucine Rich repeat","--","--","--"]
["MS01G07470",28.9957,23.1398,22.1627,0.8007,0.5027,2.3972,0.434,2.0628,1.3373,2.3003,7.9556,4.0515,2.2395,2.0586,2.0546,792,630,593,16,12,55,9,40,33,51,186,112,48,44,44,-2.212110084,"1.25013E-09","1.00661E-08","down",-3.257450828,"6.64209E-49","4.68228E-47","down",-4.139181804,"5.03581E-21","9.26477E-20","down",-4.001605461,"3.85563E-25","7.28286E-24","down",-1.774382374,0.002325425,0.008975003,"down",-0.725574868,0.146916108,0.308561738,false,0.154015409,0.827455486,0.959210812,false,-1.921011075,0.001508136,0.008751322,"down",-0.861999493,0.107524035,0.338253456,false,"chr_001",6816035,6817202,"-","MS01G07470","--","K09286 EREBP-like factor | (RefSeq) dehydration-responsive element-binding protein 3-like (A)","--","hypothetical protein DVH24_012358 [Malus domestica]","DREB3_ARATH RecName: Full=Dehydration-responsive element-binding protein 3; AltName: Full=Protein TINY 2;","A0A498HQW5_MALDO RecName: Full=AP2/ERF domain-containing protein {ECO:0000259|PROSITE:PS51032};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0043565,sequence-specific DNA binding; GO:0009873,ethylene-activated signaling pathway; GO:0045893,positive regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009723,response to ethylene; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00847.23:AP2 domain","AP2/ERF-ERF","TF","AP2/ERF->AP2/ERF-ERF"]
["MS01G07490",4.079,3.666,3.2792,4.5304,5.2316,3.642,6.0891,6.1527,6.2644,4.9624,3.6337,4.2654,4.7433,4.257,3.8803,240,215,189,195,269,180,272,257,333,237,183,254,219,196,179,0.412573308,0.058632541,0.101241687,false,0.51646523,0.007818136,0.015234482,false,0.502753707,0.035961059,0.059739884,false,1.028170316,"8.4857E-09","4.2096E-08","up",0.630156737,0.001645512,0.006676534,false,0.52724655,0.00273103,0.015121209,false,0.522290362,0.020608046,0.281614139,false,0.109465059,0.672836576,0.810481706,false,0.013051666,0.95634008,0.986227932,false,"chr_001",6831177,6834933,"-","MS01G07490","--","K18789 xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41] | (RefSeq) probable glycosyltransferase At5g20260 isoform X1 (A)","--","probable glycosyltransferase At5g03795 [Malus sylvestris]","GLYT3_ARATH RecName: Full=Probable glycosyltransferase At5g03795; EC=2.4.-.-;","A0A540KY20_MALBA RecName: Full=Exostosin domain-containing protein {ECO:0000259|Pfam:PF03016};","Acetylglucosaminyltransferase EXT1/exostosin 1","GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0016757,glycosyltransferase activity; GO:0071555,cell wall organization; GO:0006486,protein glycosylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009100,glycoprotein metabolic process; GO:0009101,glycoprotein biosynthetic process; GO:0019538,protein metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043413,macromolecule glycosylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0070085,glycosylation; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF03016.18:Exostosin family","--","--","--"]
["MS01G07530",4.2857,4.4589,4.3426,0.0868,0.109,0.2646,0,0.0894,0.0351,0.8604,1.6319,1.3174,0.2832,0.6491,0.2025,135,140,134,2,3,7,0,2,1,22,44,42,7,16,5,-1.596352996,"7.6836E-09","5.53125E-08","down",-3.237136743,"2.75172E-16","3.07752E-15","down",-4.600841279,"2.54282E-20","4.3806E-19","down",-6.483774586,"1.30947E-13","1.08575E-12","down",-4.86303215,"5.66933E-07","5.56088E-06","down","NA","NA","NA","NA","NA","NA","NA","NA",-2.99322753,"3.33895E-06","4.78218E-05","down","NA","NA","NA","NA","chr_001",6876322,6879874,"+","MS01G07530","--","K01759 lactoylglutathione lyase [EC:4.4.1.5] | (RefSeq) probable lactoylglutathione lyase, chloroplastic (A)","ko00620: Pyruvate metabolism; ko01100: Metabolic pathways","probable lactoylglutathione lyase, chloroplastic [Malus sylvestris]","LGUC_ARATH RecName: Full=Probable lactoylglutathione lyase, chloroplastic; EC=4.4.1.5; AltName: Full=Glyoxalase I; Flags: Precursor;","A0A498HP51_MALDO RecName: Full=Lactoylglutathione lyase {ECO:0000256|ARBA:ARBA00012081, ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|ARBA:ARBA00012081, ECO:0000256|RuleBase:RU361179}; AltName: Full=Glyoxalase I {ECO:0000256|RuleBase:RU361179};","Predicted glyoxalase","GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0010319,stromule; GO:0009579,thylakoid; GO:0031977,thylakoid lumen; GO:0004462,lactoylglutathione lyase activity; GO:0046872,metal ion binding; GO:0019243,methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione; GO:0009409,response to cold; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016846,carbon-sulfur lyase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006081,cellular aldehyde metabolic process; GO:0006082,organic acid metabolic process; GO:0006089,lactate metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009438,methylglyoxal metabolic process; GO:0009987,cellular process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042180,cellular ketone metabolic process; GO:0042182,ketone catabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044281,small molecule metabolic process; GO:0044282,small molecule catabolic process; GO:0046185,aldehyde catabolic process; GO:0051596,methylglyoxal catabolic process; GO:0061727,methylglyoxal catabolic process to lactate; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope","PF00903.28:Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily","--","--","--"]
["MS01G07580",7.3764,5.8617,5.5172,0.4493,0.0836,0.5217,0.5291,0.3086,0.4446,2.6993,3.285,1.8401,1.908,1.5867,1.0247,202,160,148,9,2,12,11,6,11,60,77,51,41,34,22,-1.084457745,0.000144395,0.000500378,"down",-1.760358274,"8.02745E-09","4.14885E-08","down",-3.971829748,"1.0861E-18","1.64133E-17","down",-3.585620192,"6.69164E-21","9.69213E-20","down",-2.492725751,"7.35491E-08","8.62252E-07","down",-1.811716875,0.000366806,0.00290104,"down","NA","NA","NA","NA",-2.876927068,"3.16405E-07","5.99585E-06","down",-2.187690036,0.000344689,0.00586141,"down","chr_001",6946920,6948090,"+","MS01G07580","--","--","--","hypothetical protein DVH24_012344 [Malus domestica]","PUB26_ARATH RecName: Full=U-box domain-containing protein 26; EC=2.3.2.27; AltName: Full=Plant U-box protein 26; AltName: Full=RING-type E3 ubiquitin transferase PUB26 {ECO:0000305};","A0A498HPJ5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72660.1};","--","GO:0061630,ubiquitin protein ligase activity; GO:0098542,defense response to other organism; GO:0016567,protein ubiquitination; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004842,ubiquitin-protein transferase activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0061659,ubiquitin-like protein ligase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","--","--","--","--"]
["MS01G07610",3.8671,4.0041,3.7706,3.5919,1.9006,3.8955,3.0366,3.1776,4.1158,1.3438,2.201,1.8615,1.4532,1.679,1.9603,156,161,149,106,67,132,93,91,150,44,76,76,46,53,62,-0.923714122,0.000100683,0.000359855,false,-0.902453479,"9.65126E-05",0.000274369,false,-0.109675599,0.705961659,0.761931081,false,0.109429926,0.60517875,0.677700498,false,1.045601349,0.00011516,0.000651902,"up",1.02755332,"8.50563E-05",0.000843643,"up",0.21870457,0.476868884,0.84615767,false,0.831316913,0.01527278,0.056108246,false,0.816303851,0.012764978,0.085179281,false,"chr_001",6985163,6990205,"+","MS01G07610","--","K21776 protein lin-54 | (RefSeq) protein tesmin/TSO1-like CXC 5 isoform X1 (A)","--","protein tesmin/TSO1-like CXC 5 isoform X1 [Malus sylvestris]","TCX5_ARATH RecName: Full=Protein tesmin/TSO1-like CXC 5; Short=AtTCX5;","A0A540M160_MALBA RecName: Full=CRC domain-containing protein {ECO:0000259|PROSITE:PS51634};","Metallothionein-like protein","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03638.18:Tesmin/TSO1-like CXC domain, cysteine-rich domain","CPP","TF","CPP"]
["MS01G07650",11.9542,14.2121,13.1711,3.4194,2.079,3.3541,2.2197,3.0043,4.0803,4.2171,4.3375,3.4602,2.0133,2.1872,2.4517,454,538,490,95,69,107,64,81,140,130,141,133,60,65,73,-1.52738889,"2.15053E-17","4.06332E-16","down",-2.272166311,"4.99279E-33","1.7473E-31","down",-1.947266598,"1.22301E-17","1.66645E-16","down",-1.798773543,"1.29278E-14","1.17579E-13","down",-0.26125695,0.351329744,0.504196405,false,0.489646013,0.094497362,0.227016486,false,0.14721077,0.64326509,0.906288342,false,-0.405967772,0.134302227,0.283790182,false,0.349685171,0.213636226,0.494948411,false,"chr_001",7016710,7019242,"-","MS01G07650","--","K18482 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] | (RefSeq) D-amino-acid transaminase, chloroplastic (A)","ko00790: Folate biosynthesis; ko01240: Biosynthesis of cofactors","D-amino-acid transaminase, chloroplastic [Malus domestica]","DAAA_ARATH RecName: Full=D-amino-acid transaminase, chloroplastic {ECO:0000303|PubMed:18318836}; EC=2.6.1.21; EC=4.1.3.38; AltName: Full=Aminodeoxychorismate lyase {ECO:0000303|PubMed:15500462}; Short=AtADCL; AltName: Full=Branched-chain-amino-acid aminotransferase-like protein 3; Flags: Precursor;","A0A498HRR7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72652.1};","Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily","GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0008696,4-amino-4-deoxychorismate lyase activity; GO:0047810,D-alanine:2-oxoglutarate aminotransferase activity; GO:0019752,carboxylic acid metabolic process; GO:0008153,para-aminobenzoic acid biosynthetic process; GO:0046654,tetrahydrofolate biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016830,carbon-carbon lyase activity; GO:0016833,oxo-acid-lyase activity; GO:0008483,transaminase activity; GO:0016740,transferase activity; GO:0016769,transferase activity, transferring nitrogenous groups; GO:0006082,organic acid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009058,biosynthetic process; GO:0009072,aromatic amino acid family metabolic process; GO:0009073,aromatic amino acid family biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042537,benzene-containing compound metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0046482,para-aminobenzoic acid metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006575,cellular modified amino acid metabolic process; GO:0006760,folic acid-containing compound metabolic process; GO:0009396,folic acid-containing compound biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042398,cellular modified amino acid biosynthetic process; GO:0042558,pteridine-containing compound metabolic process; GO:0042559,pteridine-containing compound biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0046653,tetrahydrofolate metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma","PF01063.22:Amino-transferase class IV","--","--","--"]
["MS01G07680",2.4752,1.6437,1.7567,0.5639,0.4855,0.7717,0.6365,0.5479,0.8349,0.6244,1.3082,0.6056,0.5407,0.7832,0.8719,210,139,146,35,36,55,41,33,64,43,95,52,36,52,58,-1.040527712,0.002969388,0.007471764,"down",-1.133437646,0.000102123,0.000288818,"down",-1.484211231,"1.22234E-06","4.75369E-06","down",-1.259064005,"2.032E-05","6.30233E-05","down",-0.210983701,0.596735616,0.724643977,false,-0.110157104,0.741276456,0.854615813,false,0.224570209,0.507765569,0.858027044,false,-0.432487797,0.29256074,0.481083731,false,-0.3271061,0.338079042,0.628022505,false,"chr_001",7037468,7043248,"-","MS01G07680","--","K09420 transcriptional activator Myb | (RefSeq) LOW QUALITY PROTEIN: transcription factor MYB3R-1-like (A)","--","hypothetical protein DVH24_012332 [Malus domestica]","MB3R4_ARATH RecName: Full=Transcription factor MYB3R-4 {ECO:0000303|PubMed:11597504}; AltName: Full=Myb-related protein 3R-4 {ECO:0000303|PubMed:11597504}; AltName: Full=Protein ENHANCED DEFECTIVE CYTOKINESIS {ECO:0000303|PubMed:25806785};","A0A498HMC1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72648.1};","Transcription factor, Myb superfamily","GO:0005634,nucleus; GO:0009524,phragmoplast; GO:0005819,spindle; GO:0001228,DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003700,DNA-binding transcription factor activity; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0043565,sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0050832,defense response to fungus; GO:1901181,negative regulation of cellular response to caffeine; GO:0045893,positive regulation of DNA-templated transcription; GO:0032465,regulation of cytokinesis; GO:0032875,regulation of DNA endoreduplication; GO:0006355,regulation of DNA-templated transcription; GO:0009620,response to fungus; GO:0009751,response to salicylic acid; GO:0001216,DNA-binding transcription activator activity; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0000977,RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000987,cis-regulatory region sequence-specific DNA binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0009719,response to endogenous stimulus; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010243,response to organonitrogen compound; GO:0014070,response to organic cyclic compound; GO:0014074,response to purine-containing compound; GO:0031000,response to caffeine; GO:0042221,response to chemical; GO:0043279,response to alkaloid; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071312,cellular response to alkaloid; GO:0071313,cellular response to caffeine; GO:0071407,cellular response to organic cyclic compound; GO:0071415,cellular response to purine-containing compound; GO:0071417,cellular response to organonitrogen compound; GO:0071495,cellular response to endogenous stimulus; GO:1901698,response to nitrogen compound; GO:1901699,cellular response to nitrogen compound; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0000910,cytokinesis; GO:0007049,cell cycle; GO:0010564,regulation of cell cycle process; GO:0022402,cell cycle process; GO:0051301,cell division; GO:0051302,regulation of cell division; GO:0051726,regulation of cell cycle; GO:0006259,DNA metabolic process; GO:0006260,DNA replication; GO:0006261,DNA-templated DNA replication; GO:0006275,regulation of DNA replication; GO:0042023,DNA endoreduplication; GO:0044260,cellular macromolecule metabolic process; GO:0044786,cell cycle DNA replication; GO:0051052,regulation of DNA metabolic process; GO:0090329,regulation of DNA-templated DNA replication; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0015630,microtubule cytoskeleton; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle","PF00249.34:Myb-like DNA-binding domain","MYB","TF","MYB->MYB"]
["MS01G07710",71.7362,45.3038,70.1096,10.9035,16.6217,14.5926,9.0965,7.2151,8.8005,26.5918,27.5095,32.4061,23.3497,34.2273,19.3723,2815,1772,2695,313,570,481,271,201,312,847,924,1287,719,1051,596,-0.925572793,"8.34965E-06","3.67556E-05",false,-0.989615789,"9.24976E-05",0.000263895,false,-1.931736281,"2.16482E-14","2.19549E-13","down",-2.613306042,"9.67768E-33","2.8591E-31","down",-1.674865852,"6.71584E-24","5.29917E-22","down",-1.609936441,"3.62089E-11","1.74871E-09","down",-0.686657516,0.003218532,0.111111661,false,-0.986839212,"4.30004E-06","5.95386E-05",false,-0.915347465,0.000792296,0.011290929,false,"chr_001",7054892,7058541,"-","MS01G07710","--","--","--","sulfite exporter TauE/SafE family protein 3-like [Malus domestica]","TAUE3_ARATH RecName: Full=Sulfite exporter TauE/SafE family protein 3 {ECO:0000312|EMBL:AEC07746.1};","A0A5N5HSG6_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2629663.1};","--","GO:0031464,Cul4A-RING E3 ubiquitin ligase complex; GO:0016021,integral component of membrane; GO:0016567,protein ubiquitination; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0000151,ubiquitin ligase complex; GO:0005575,cellular_component; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0032991,protein-containing complex; GO:0080008,Cul4-RING E3 ubiquitin ligase complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF01925.22:Sulfite exporter TauE/SafE","--","--","--"]
["MS01G07730",7.583,8.8315,12.5539,4.7322,3.6595,4.239,3.8215,4.5977,4.6711,6.0521,7.1643,4.5932,3.5713,4.3818,3.5744,230,267,373,105,97,108,88,99,128,149,186,141,85,104,85,-0.513771217,0.048354991,0.085822122,false,-1.032403013,"2.15532E-05","6.84682E-05","down",-0.981254913,0.000117923,0.000329809,false,-0.85836706,0.000470816,0.001158925,false,-0.332798912,0.186143107,0.316996066,false,0.189334394,0.416259317,0.609930323,false,0.122304676,0.598131499,0.890523372,false,-0.452152884,0.081559453,0.199227965,false,0.075749123,0.747939107,0.898629223,false,"chr_001",7076249,7078566,"+","MS01G07730","--","--","--","rhomboid-like protein 11, chloroplastic [Malus domestica]","RBL11_ARATH RecName: Full=Rhomboid-like protein 11, chloroplastic {ECO:0000303|PubMed:17181860}; Short=AtRBL11 {ECO:0000303|PubMed:17181860}; EC=3.4.21.- {ECO:0000305}; Flags: Precursor;","A0A540M1E4_MALBA RecName: Full=Rhomboid domain-containing protein {ECO:0000259|Pfam:PF01694};","--","GO:0009507,chloroplast; GO:0009706,chloroplast inner membrane; GO:0016021,integral component of membrane; GO:0019904,protein domain specific binding; GO:0004252,serine-type endopeptidase activity; GO:0006508,proteolysis; GO:0080140,regulation of jasmonic acid metabolic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0016787,hydrolase activity; GO:0017171,serine hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0009694,jasmonic acid metabolic process; GO:0009987,cellular process; GO:0010565,regulation of cellular ketone metabolic process; GO:0019216,regulation of lipid metabolic process; GO:0019217,regulation of fatty acid metabolic process; GO:0019222,regulation of metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042180,cellular ketone metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0062012,regulation of small molecule metabolic process; GO:0065007,biological regulation; GO:0080090,regulation of primary metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0009528,plastid inner membrane; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031969,chloroplast membrane; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0031224,intrinsic component of membrane","PF01694.25:Rhomboid family","--","--","--"]
["MS01G07740",4.7765,3.6511,7.198,2.7983,3.8174,6.4988,2.5965,0.8544,2.098,4.1099,3.986,5.6185,3.3817,5.329,3.9649,63,48,93,27,44,72,26,8,25,44,45,75,35,55,41,0.007535801,0.982621196,0.987634399,false,-0.006085357,0.986211712,0.989662816,false,-0.040502597,0.921857463,0.938846596,false,-1.200031504,0.00995269,0.018952347,"down",-1.19343069,0.007993639,0.025593604,"down",-1.179192572,0.009657819,0.041314086,"down",-1.163063063,0.022365762,0.290550564,false,-0.02871323,0.941476775,0.970996266,false,-0.0084851,0.98292272,0.994947666,false,"chr_001",7079651,7080315,"-","MS01G07740","--","--","--","hypothetical protein DVH24_012325 [Malus domestica]","PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630;","A0A498HU24_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72641.1};","FOG: PPR repeat","--","PF13041.9:PPR repeat family","--","--","--"]
["MS01G07820",188.1973,256.8253,350.9855,32.5021,8.45,23.3181,5.7601,12.3935,62.9536,43.8419,73.6977,31.3586,13.4148,15.9288,10.7547,7187,9776,13130,908,282,748,167,336,2172,1359,2409,1212,402,476,322,-2.23478314,"1.45421E-12","1.67342E-11","down",-4.012015741,"2.32992E-63","2.80893E-61","down",-3.422292747,"2.15721E-16","2.63446E-15","down",-3.049588796,0.001595053,0.003580534,"down",-0.797499493,0.411493311,0.563240828,false,0.988978128,0.301384236,0.497328918,false,0.386079035,0.709047693,0.924998478,false,-1.177955069,0.008812312,0.036423281,"down",0.611268223,0.129587033,0.37631646,false,"chr_001",7166789,7169247,"+","MS01G07820","--","--","--","BURP domain protein RD22 [Malus domestica]","RD22_ARATH RecName: Full=BURP domain protein RD22 {ECO:0000303|PubMed:9790599}; AltName: Full=Dehydration-responsive protein RD22 {ECO:0000303|PubMed:8479424}; Flags: Precursor;","A0A540M195_MALBA RecName: Full=BURP domain-containing protein {ECO:0000259|PROSITE:PS51277};","--","GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005802,trans-Golgi network; GO:0003729,mRNA binding; GO:0009651,response to salt stress; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity; GO:0031984,organelle subcompartment; GO:0098791,Golgi apparatus subcompartment","PF03181.18:BURP domain","--","--","--"]
["MS01G07850",1.4941,1.4831,1.1078,0.1075,0.072,0.3183,0.0829,0.0443,0.0696,0.6394,0.9371,0.6682,0.1403,0.2412,0.2006,95,94,69,5,4,17,4,2,4,33,51,43,7,12,10,-0.686505993,0.02276364,0.044848878,false,-2.523891215,"6.94273E-10","4.11039E-09","down",-2.837507847,"3.19088E-08","1.56116E-07","down",-4.088587281,"6.21167E-13","4.83509E-12","down",-3.389929073,"3.34727E-08","4.1648E-07","down","NA","NA","NA","NA","NA","NA","NA","NA",-2.140498445,0.000224473,0.001793446,"down","NA","NA","NA","NA","chr_001",7210305,7214163,"+","MS01G07850","--","--","--","nitrate regulatory gene2 protein-like [Malus domestica]","REL2_ORYSJ RecName: Full=Protein ROLLING AND ERECT LEAF 2 {ECO:0000303|PubMed:27473144};","A0A498HMA0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72628.1};","--","GO:0005886,plasma membrane; GO:0030154,cell differentiation; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF04782.15:Protein of unknown function (DUF632)","--","--","--"]
["MS01G07870",22.5372,21.5635,22.2007,47.1562,38.1193,47.3812,36.3731,28.6468,32.2202,33.5339,31.5696,35.9247,32.0635,35.686,34.5741,799,762,771,1223,1181,1411,979,721,1032,965,958,1289,892,990,961,0.796050536,"5.38632E-10","4.55632E-09",false,0.917543396,"2.60114E-15","2.67606E-14",false,1.211615969,"1.44883E-18","2.16098E-17","up",0.836314172,"3.4954E-08","1.60105E-07",false,0.053212653,0.734979643,0.829439901,false,-0.066594139,0.656859509,0.799444351,false,-0.37736524,0.019682731,0.27639709,false,0.433143568,0.002950302,0.015081978,false,0.318699246,0.019648508,0.114873939,false,"chr_001",7219926,7223503,"+","MS01G07870","--","K08287 dual-specificity kinase [EC:2.7.12.1] | (RefSeq) serine/threonine-protein kinase AFC3 (A)","--","serine/threonine-protein kinase AFC3 [Malus domestica]","AFC3_ARATH RecName: Full=Serine/threonine-protein kinase AFC3; EC=2.7.12.1;","A0A540M197_MALBA RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","LAMMER dual specificity kinases","GO:0005634,nucleus; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004712,protein serine/threonine/tyrosine kinase activity; GO:0004713,protein tyrosine kinase activity; GO:0046777,protein autophosphorylation; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G07920",1.423,1.2135,1.4527,0.4863,0.2035,0.4235,0.3749,0.6514,0.1181,0.8766,0.7066,1.1951,0.408,0.1819,0.9529,40,34,40,10,5,10,8,13,3,20,17,34,9,4,21,-0.360732582,0.352126494,0.451635852,false,-1.116039037,0.045729809,0.073504645,false,-1.682724722,0.000743971,0.00179099,"down",-1.571745157,0.007695127,0.015009836,"down",-1.186714995,0.077865611,0.162779699,false,"NA","NA","NA","NA","NA","NA","NA","NA",-1.299013507,0.02485826,0.08144638,false,"NA","NA","NA","NA","chr_001",7237172,7239777,"+","MS01G07920","--","--","--","NAC domain-containing protein 100-like isoform X2 [Malus sylvestris]","NAC98_ARATH RecName: Full=Protein CUP-SHAPED COTYLEDON 2; AltName: Full=NAC domain-containing protein 98; Short=ANAC098; AltName: Full=NAC domain-containing protein CUC2;","A0A498HU04_MALDO RecName: Full=NAC domain-containing protein {ECO:0000259|PROSITE:PS51005};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0090691,formation of plant organ boundary; GO:0048366,leaf development; GO:0010072,primary shoot apical meristem specification; GO:0090709,regulation of timing of plant organ formation; GO:0010223,secondary shoot formation; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0009653,anatomical structure morphogenesis; GO:0032502,developmental process; GO:0048646,anatomical structure formation involved in morphogenesis; GO:0048856,anatomical structure development; GO:0048859,formation of anatomical boundary; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0099402,plant organ development; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0009793,embryo development ending in seed dormancy; GO:0009888,tissue development; GO:0009933,meristem structural organization; GO:0010014,meristem initiation; GO:0010016,shoot system morphogenesis; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0048316,seed development; GO:0048507,meristem development; GO:0048508,embryonic meristem development; GO:0048532,anatomical structure arrangement; GO:0048608,reproductive structure development; GO:0061458,reproductive system development; GO:0090421,embryonic meristem initiation; GO:0022603,regulation of anatomical structure morphogenesis; GO:0040034,regulation of development, heterochronic; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0065007,biological regulation; GO:1905393,plant organ formation; GO:1905428,regulation of plant organ formation; GO:0001763,morphogenesis of a branching structure; GO:0010346,shoot axis formation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02365.18:No apical meristem (NAM) protein","NAC","TF","NAC"]
["MS01G07960",9.1553,9.0884,5.6217,9.1463,17.7548,8.5391,14.1446,25.3657,15.6196,25.6113,13.4143,13.7255,19.0183,12.3157,21.8447,665,658,400,486,1127,521,780,1308,1025,1510,834,1009,1084,700,1244,1.342384011,"3.68063E-05",0.000142944,"up",1.443994167,"9.63544E-08","4.33514E-07","up",0.797002298,0.024680749,0.042749084,false,1.491599573,"5.61054E-07","2.19392E-06","up",0.164522532,0.633841859,0.754827982,false,0.0631035,0.829817709,0.907219716,false,0.689180691,0.064090182,0.447138101,false,-0.523248526,0.180667855,0.34767937,false,-0.617919023,0.078244415,0.280240172,false,"chr_001",7301356,7307567,"+","MS01G07960","--","K08869 aarF domain-containing kinase | (RefSeq) uncharacterized protein LOC103453649 (A)","--","uncharacterized protein LOC126603441 isoform X1 [Malus sylvestris]","AB1K8_ARATH RecName: Full=Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic {ECO:0000303|PubMed:22694836}; Short=ABC1-LIKE KINASE 8 {ECO:0000303|PubMed:22694836}; EC=2.7.11.1 {ECO:0000250|UniProtKB:Q9MA15}; AltName: Full=ABC2 homolog protein 13 {ECO:0000303|PubMed:11346655}; Short=AtATH13 {ECO:0000303|PubMed:11346655}; AltName: Full=Oxidative stress-related ABC1-like protein 1, chloroplastic {ECO:0000303|PubMed:18390807}; Short=AtOSA1 {ECO:0000303|PubMed:18390807}; Flags: Precursor;","A0A5N5GVQ5_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2619237.1};","Predicted unusual protein kinase","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0031969,chloroplast membrane; GO:0016021,integral component of membrane; GO:0009536,plastid; GO:0005524,ATP binding; GO:0004672,protein kinase activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0034599,cellular response to oxidative stress; GO:0007623,circadian rhythm; GO:0055072,iron ion homeostasis; GO:0010150,leaf senescence; GO:0046467,membrane lipid biosynthetic process; GO:0016310,phosphorylation; GO:1901031,regulation of response to reactive oxygen species; GO:0046686,response to cadmium ion; GO:0009644,response to high light intensity; GO:0042542,response to hydrogen peroxide; GO:1990641,response to iron ion starvation; GO:0006979,response to oxidative stress; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0062197,cellular response to chemical stress; GO:0070887,cellular response to chemical stimulus; GO:0048511,rhythmic process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055065,metal ion homeostasis; GO:0055076,transition metal ion homeostasis; GO:0055080,cation homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0098771,inorganic ion homeostasis; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0090693,plant organ senescence; GO:0099402,plant organ development; GO:0006629,lipid metabolic process; GO:0006643,membrane lipid metabolic process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0000302,response to reactive oxygen species; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0080134,regulation of response to stress; GO:1901700,response to oxygen-containing compound; GO:1902882,regulation of response to oxidative stress; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009642,response to light intensity; GO:0009605,response to external stimulus; GO:0009991,response to extracellular stimulus; GO:0031667,response to nutrient levels; GO:0042594,response to starvation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0042170,plastid membrane; GO:0031224,intrinsic component of membrane","PF03109.19:ABC1 atypical kinase-like domain","--","--","--"]
["MS01G07980",1.9241,3.4613,2.6076,1.043,0.4935,0.4344,0.6117,0.3738,1.2852,0.5313,1.0852,0.2294,0.8455,0.4239,0.5924,58,104,77,23,13,11,14,8,35,13,28,7,20,10,14,-1.949832564,0.000170791,0.000582195,"down",-1.805351491,"1.50845E-05","4.9091E-05","down",-1.816975039,"8.29914E-05",0.000238585,"down",-1.528155942,0.001178549,0.002703302,"down",0.416079991,0.559685153,0.69495198,false,0.289619297,0.630962534,0.781317318,false,0.27522021,0.666282559,0.913930432,false,0.148430293,0.834248876,0.910349152,false,0.017296171,0.976542072,0.992862359,false,"chr_001",7311714,7314502,"-","MS01G07980","--","K25784 bZIP transcription factor 9/10/25/63 | (RefSeq) basic leucine zipper 9-like (A)","--","basic leucine zipper 9-like [Malus sylvestris]","BZIP9_ARATH RecName: Full=Basic leucine zipper 9; Short=AtbZIP9; Short=bZIP protein 9; AltName: Full=Basic leucine zipper OPAQUE 2 homolog 2; Short=Basic leucine zipper O2 homolog 2;","A0A498HSR8_MALDO RecName: Full=BZIP domain-containing protein {ECO:0000259|PROSITE:PS50217};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0042803,protein homodimerization activity; GO:0000976,transcription cis-regulatory region binding; GO:0071333,cellular response to glucose stimulus; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0001678,cellular glucose homeostasis; GO:0008150,biological_process; GO:0009743,response to carbohydrate; GO:0009746,response to hexose; GO:0009749,response to glucose; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0019725,cellular homeostasis; GO:0033500,carbohydrate homeostasis; GO:0034284,response to monosaccharide; GO:0042221,response to chemical; GO:0042592,homeostatic process; GO:0042593,glucose homeostasis; GO:0048878,chemical homeostasis; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0055082,cellular chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071322,cellular response to carbohydrate stimulus; GO:0071326,cellular response to monosaccharide stimulus; GO:0071331,cellular response to hexose stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00170.24:bZIP transcription factor","bZIP","TF","bZIP"]
["MS01G08000",0.2406,0.6034,0.5526,0.4111,0.8947,1.432,0.0792,0.0847,0.3328,0.815,2.7403,1.1291,0.9964,1.9983,1.9178,4,10,9,5,13,20,1,1,5,11,39,19,13,26,25,"NA","NA","NA","NA",2.105748369,0.000302257,0.000785686,"up","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-3.240216233,"5.48584E-05",0.000583659,"down","NA","NA","NA","NA",-0.717623516,0.29190548,0.480366428,false,-0.889838453,0.128326631,0.37423547,false,"chr_001",7329216,7331707,"-","MS01G08000","--","--","--","uncharacterized protein LOC103410755 [Malus domestica]","--","A0A540LK00_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD86801.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF04654.15:Protein of unknown function, DUF599","--","--","--"]
["MS01G08030",8.0196,6.6301,8.1867,37.4536,36.2625,40.3486,52.7022,34.7409,40.9566,29.6931,34.4827,40.9425,44.1086,43.11,38.6198,557,459,557,1903,2201,2354,2779,1713,2570,1674,2050,2878,2404,2343,2103,2.387536878,"2.20843E-47","2.74207E-45","up",2.756443397,"2.06028E-81","4.19687E-79","up",2.534625651,"5.38785E-74","1.34859E-71","up",2.777370504,"6.00998E-43","2.84709E-41","up",0.401790897,0.053178763,0.120477602,false,0.034772931,0.856397314,0.922414205,false,0.238738044,0.21498125,0.672984783,false,0.164777416,0.277718655,0.464342058,false,-0.196226979,0.124317668,0.36696881,false,"chr_001",7353988,7361343,"+","MS01G08030","--","K12446 L-arabinokinase [EC:2.7.1.46] | (RefSeq) L-arabinokinase-like (A)","ko00520: Amino sugar and nucleotide sugar metabolism; ko01100: Metabolic pathways; ko01250: Biosynthesis of nucleotide sugars","L-arabinokinase-like [Malus domestica]","ARAK_ARATH RecName: Full=L-arabinokinase; Short=AtISA1; EC=2.7.1.46;","A0A498HPD6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72600.1};","Galactokinase","GO:0005829,cytosol; GO:0016021,integral component of membrane; GO:0009506,plasmodesma; GO:0005524,ATP binding; GO:0009702,L-arabinokinase activity; GO:0019566,arabinose metabolic process; GO:0006012,galactose metabolic process; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0019200,carbohydrate kinase activity; GO:0005975,carbohydrate metabolic process; GO:0005996,monosaccharide metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019321,pentose metabolic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0019318,hexose metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF00288.29:GHMP kinases N terminal domain","--","--","--"]
["MS01G08040",3.3666,3.9825,5.0783,1.5798,1.7825,2.8714,0.9266,1.1325,1.5017,4.581,2.9939,4.0216,3.3938,3.2107,2.0509,67,79,99,23,31,48,14,16,27,74,51,81,53,50,32,0.096313901,0.749244892,0.814581504,false,-0.223109238,0.482367777,0.562647283,false,-0.781204749,0.024093338,0.041847581,false,-1.512051974,"2.92463E-05","8.84944E-05","down",-1.595142093,"3.45167E-05",0.000224007,"down",-1.274121214,0.001873875,0.011115915,"down",-0.731970124,0.095083979,0.52117587,false,-0.860648819,0.020120232,0.069339931,false,-0.533325569,0.169446536,0.437473835,false,"chr_001",7361334,7362876,"-","MS01G08040","--","--","--","AIG2-like protein D [Malus domestica]","AIGLD_ARATH RecName: Full=AIG2-like protein D {ECO:0000305}; EC=2.3.2.- {ECO:0000305}; AltName: Full=Avirulence-induced gene 2-like protein D {ECO:0000305}; AltName: Full=Putative gamma-glutamylcyclotransferase {ECO:0000250|UniProtKB:O75223};","A0A540LJZ6_MALBA RecName: Full=Putative gamma-glutamylcyclotransferase {ECO:0000256|ARBA:ARBA00030602};","--","GO:0016746,acyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity","PF06094.15:Gamma-glutamyl cyclotransferase, AIG2-like","--","--","--"]
["MS01G08080",23.1152,19.1078,10.7259,2.0974,4.9619,3.8518,3.9981,4.3226,4.7627,12.369,7.2871,4.614,4.2507,5.4987,6.5092,693,571,315,46,130,97,91,92,129,301,187,140,100,129,153,-0.931107135,0.020819915,0.041542829,false,-1.421858904,"3.23362E-06","1.16934E-05","down",-2.06267735,"1.30012E-07","5.82777E-07","down",-1.743280985,"1.24455E-08","6.04099E-08","down",-0.796347452,0.034189264,0.08485629,false,-0.304976125,0.201244379,0.382629805,false,0.314599232,0.370454659,0.791821111,false,-1.112665167,0.013660766,0.051349067,false,-0.612778567,0.084594297,0.293794399,false,"chr_001",7434078,7436829,"-","MS01G08080","--","K22596 gamma-glutamylcyclotransferase, plant [EC:4.3.2.9] | (RefSeq) gamma-glutamylcyclotransferase 2-1-like (A)","ko00480: Glutathione metabolism; ko01100: Metabolic pathways","gamma-glutamylcyclotransferase 2-1-like [Malus domestica]","GCT22_ARATH RecName: Full=Gamma-glutamylcyclotransferase 2-2 {ECO:0000305}; Short=AtGGCT2;2 {ECO:0000303|PubMed:25716890}; EC=4.3.2.9 {ECO:0000269|PubMed:25716890}; AltName: Full=Gamma-glutamyl cyclotransferase 2;2 {ECO:0000303|PubMed:25716890};","A0A498HSQ6_MALDO RecName: Full=Gamma-glutamylcyclotransferase {ECO:0000256|RuleBase:RU363081}; EC=4.3.2.9 {ECO:0000256|RuleBase:RU363081};","Predicted cation transporter","GO:0005737,cytoplasm; GO:0003839,gamma-glutamylcyclotransferase activity; GO:0006751,glutathione catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016840,carbon-nitrogen lyase activity; GO:0016842,amidine-lyase activity; GO:0006518,peptide metabolic process; GO:0006575,cellular modified amino acid metabolic process; GO:0006749,glutathione metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042219,cellular modified amino acid catabolic process; GO:0043171,peptide catabolic process; GO:0043603,cellular amide metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044273,sulfur compound catabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF04752.15:ChaC-like protein","--","--","--"]
["MS01G08100",11.6515,15.8024,9.932,16.5976,17.4854,19.1018,15.3729,13.2072,12.3322,16.6985,14.0478,19.3426,18.1728,23.864,20.6907,594,803,496,619,779,818,595,478,568,691,613,998,727,952,827,0.609133202,0.008601383,0.019215261,false,1.034169955,"9.55303E-07","3.74775E-06","up",0.718943084,0.000954983,0.00224916,false,0.412823758,0.072945589,0.112168877,false,-0.182701554,0.355956657,0.508975375,false,-0.607350709,0.000648513,0.004632977,false,-0.30983863,0.066790501,0.454208348,false,0.12910942,0.471448059,0.656387463,false,-0.289469814,0.06811409,0.257429283,false,"chr_001",7443932,7446782,"+","MS01G08100","--","--","--","uncharacterized protein LOC126604274 [Malus sylvestris]","--","A0A540LJY2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD86781.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF12056.11:Protein of unknown function (DUF3537)","--","--","--"]
["MS01G08140",3.6822,2.8998,4.6886,3.7345,4.3495,3.3467,3.755,4.406,4.9961,2.2926,2.0816,1.8778,2.0687,1.771,1.9696,93,73,116,69,96,71,72,79,114,47,45,48,41,35,39,-0.661666062,0.025570928,0.049602632,false,-0.659425645,0.027825361,0.047416933,false,0.244680706,0.400197025,0.480694757,false,0.508895988,0.05779869,0.091365958,false,1.184646482,"1.54593E-05",0.000109894,"up",1.184572548,"2.26494E-05",0.000275144,"up",0.261795277,0.332101074,0.767765445,false,0.924264789,0.002093871,0.011450341,false,0.930598237,0.00192723,0.021875085,false,"chr_001",7492310,7493389,"-","MS01G08140","--","K02218 casein kinase 1 [EC:2.7.11.1] | (RefSeq) LOW QUALITY PROTEIN: casein kinase 1-like protein 1 (A)","--","casein kinase 1-like protein 1 [Malus sylvestris]","CKL1_ARATH RecName: Full=Casein kinase 1-like protein 1 {ECO:0000305}; EC=2.7.11.1 {ECO:0000305}; AltName: Full=Casein kinase 1 {ECO:0000303|PubMed:7923358}; AltName: Full=Casein kinase I isoform delta-like {ECO:0000305}; Short=CKI-delta {ECO:0000305}; AltName: Full=Protein CASEIN KINASE I-LIKE 1 {ECO:0000303|PubMed:16126836};","A0A540MP52_MALBA RecName: Full=Non-specific serine/threonine protein kinase {ECO:0000256|ARBA:ARBA00012513}; EC=2.7.11.1 {ECO:0000256|ARBA:ARBA00012513};","Casein kinase (serine/threonine/tyrosine protein kinase)","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0009506,plasmodesma; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006897,endocytosis; GO:0018105,peptidyl-serine phosphorylation; GO:0007165,signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006810,transport; GO:0008150,biological_process; GO:0016192,vesicle-mediated transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0018193,peptidyl-amino acid modification; GO:0018209,peptidyl-serine modification; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0007154,cell communication; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G08230",1.1213,0.887,1.4749,0,0,0.0513,0,0.0304,0,0.1328,0.1512,0.0639,0,0.0276,0.1925,52,41,67,0,0,2,0,1,0,5,6,3,0,1,7,-3.161993256,"1.00026E-08","7.08673E-08","down",-3.693780413,"3.24391E-07","1.35142E-06","down",-5.831768009,"1.80527E-07","7.94266E-07","down",-6.597465946,"1.52704E-07","6.42023E-07","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",7562106,7564266,"+","MS01G08230","--","K12450 UDP-glucose 4,6-dehydratase [EC:4.2.1.76] | (RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like (A)","ko00520: Amino sugar and nucleotide sugar metabolism; ko01100: Metabolic pathways; ko01250: Biosynthesis of nucleotide sugars","hypothetical protein DVH24_012268 [Malus domestica]","RHM1_ARATH RecName: Full=Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 {ECO:0000305|PubMed:17190829}; AltName: Full=Protein REPRESSOR OF LRX1 1 {ECO:0000303|PubMed:18567791}; AltName: Full=Rhamnose biosynthetic enzyme 1; Short=AtRHM1; Includes: RecName: Full=UDP-glucose 4,6-dehydratase {ECO:0000305|PubMed:17190829}; EC=4.2.1.76 {ECO:0000305|PubMed:17190829}; Includes: RecName: Full=UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose 4-keto-reductase {ECO:0000305|PubMed:17190829}; EC=1.1.1.- {ECO:0000305|PubMed:17190829}; EC=5.1.3.- {ECO:0000305|PubMed:17190829};","A0A498HQM9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72584.1};","Putative NAD+-dependent epimerases","GO:0005829,cytosol; GO:0005739,mitochondrion; GO:0009506,plasmodesma; GO:0008460,dTDP-glucose 4,6-dehydratase activity; GO:0016853,isomerase activity; GO:0016491,oxidoreductase activity; GO:0050377,UDP-glucose 4,6-dehydratase activity; GO:0010280,UDP-L-rhamnose synthase activity; GO:0010315,auxin export across the plasma membrane; GO:0030154,cell differentiation; GO:0071555,cell wall organization; GO:0051555,flavonol biosynthetic process; GO:0042127,regulation of cell population proliferation; GO:0010253,UDP-rhamnose biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016835,carbon-oxygen lyase activity; GO:0016836,hydro-lyase activity; GO:0016740,transferase activity; GO:0006810,transport; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009733,response to auxin; GO:0009734,auxin-activated signaling pathway; GO:0009755,hormone-mediated signaling pathway; GO:0009914,hormone transport; GO:0009966,regulation of signal transduction; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0010817,regulation of hormone levels; GO:0010928,regulation of auxin mediated signaling pathway; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051716,cellular response to stimulus; GO:0055085,transmembrane transport; GO:0060918,auxin transport; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0140115,export across plasma membrane; GO:0140352,export from cell; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0009813,flavonoid biosynthetic process; GO:0042440,pigment metabolic process; GO:0046148,pigment biosynthetic process; GO:0051552,flavone metabolic process; GO:0051553,flavone biosynthetic process; GO:0051554,flavonol metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0008283,cell population proliferation; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006793,phosphorus metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009225,nucleotide-sugar metabolic process; GO:0009226,nucleotide-sugar biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0033478,UDP-rhamnose metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF16363.8:GDP-mannose 4,6 dehydratase","--","--","--"]
["MS01G08250",18.05,16.0454,19.0843,6.5461,6.2175,8.1861,5.4181,4.7997,5.0627,12.3289,12.0143,12.2841,9.3887,11.4157,12.6467,588,521,609,156,177,224,134,111,149,326,335,405,240,291,323,-0.349581607,0.014396491,0.030178374,false,-0.377671239,0.02178919,0.038201894,false,-1.132193515,"4.51765E-11","3.20464E-10","down",-1.515327174,"7.52272E-19","9.47507E-18","down",-1.153078847,"1.96305E-11","4.1153E-10","down",-1.122426954,"1.01596E-08","2.91042E-07","down",-0.384550713,0.055549971,0.420836816,false,-0.765587934,"1.1902E-05",0.000143894,false,-0.729999464,0.000216677,0.004019978,false,"chr_001",7570928,7572320,"+","MS01G08250","--","K00306 sarcosine oxidase / L-pipecolate oxidase [EC:1.5.3.1 1.5.3.7] | (RefSeq) probable sarcosine oxidase (A)","ko00260: Glycine, serine and threonine metabolism; ko00310: Lysine degradation; ko01100: Metabolic pathways; ko04146: Peroxisome","hypothetical protein DVH24_012266 [Malus domestica]","SOX_ARATH RecName: Full=Probable sarcosine oxidase; EC=1.5.3.1;","A0A498HRL0_MALDO RecName: Full=Sarcosine oxidase {ECO:0000256|ARBA:ARBA00012769}; EC=1.5.3.1 {ECO:0000256|ARBA:ARBA00012769};","FAD-dependent oxidoreductase","GO:0050660,flavin adenine dinucleotide binding; GO:0008115,sarcosine oxidase activity; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016645,oxidoreductase activity, acting on the CH-NH group of donors; GO:0016647,oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","PF01266.27:FAD dependent oxidoreductase","--","--","--"]
["MS01G08290",216.0042,225.0885,294.3781,471.557,367.3913,542.8748,477.5649,364.5322,407.807,367.4601,486.461,466.7204,498.9036,621.5382,406.3354,8946,9292,11943,14287,13297,18886,15016,10718,15259,12353,17245,19563,16214,20143,13194,1.029529728,"2.3882E-10","2.12379E-09","up",1.349865047,"3.67851E-12","2.77741E-11","up",1.12065618,"2.09199E-09","1.20526E-08","up",1.053484738,"3.09393E-09","1.61368E-08","up",0.034859002,0.835135459,0.898085389,false,-0.282684964,0.161851007,0.329840408,false,-0.069472794,0.704450609,0.923549297,false,0.10679248,0.539409964,0.713243806,false,-0.204490698,0.326544135,0.617969888,false,"chr_001",7630533,7632412,"+","MS01G08290","--","--","--","hypothetical protein DVH24_012262 [Malus domestica]","O3L4_ARATH RecName: Full=Protein OXIDATIVE STRESS 3 LIKE 4 {ECO:0000303|PubMed:18980652}; Short=AtO3L4 {ECO:0000303|PubMed:18980652}; AltName: Full=KID-containing protein {ECO:0000303|PubMed:12631331}; Short=AtKCP {ECO:0000303|PubMed:12631331};","A0A498HM51_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72578.1};","Nuclear localization sequence binding protein","GO:0005634,nucleus; GO:0045893,positive regulation of DNA-templated transcription; GO:0046686,response to cadmium ion; GO:0006979,response to oxidative stress; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0006950,response to stress; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G08460",11.1421,12.6218,13.8336,26.7112,18.4165,21.3905,24.2398,26.4878,27.9617,13.7268,14.9717,12.4638,19.5503,13.4478,11.7789,666,752,810,1168,962,1074,1100,1124,1510,666,766,754,917,629,552,0.318133746,0.029194306,0.055598435,false,0.551821036,0.01276441,0.023664473,false,1.037996983,"4.52482E-08","2.16265E-07","up",1.349572772,"1.02864E-22","1.65955E-21","up",1.043968806,"1.24279E-13","3.48152E-12","up",0.813926131,0.000262749,0.002187975,false,0.31132004,0.08746086,0.504112643,false,0.735364805,0.000120461,0.00106395,false,0.511901465,0.041249975,0.187334007,false,"chr_001",7733739,7739661,"-","MS01G08460","--","K08869 aarF domain-containing kinase | (RefSeq) protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic (A)","--","protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic [Malus domestica]","AB1K1_ARATH RecName: Full=Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic {ECO:0000303|PubMed:23673981}; Short=ABC1-LIKE KINASE 1 {ECO:0000303|PubMed:23673981}; EC=2.7.-.- {ECO:0000255|PROSITE-ProRule:PRU00159}; EC=2.7.11.1 {ECO:0000269|PubMed:24267661}; AltName: Full=Protein ABC1-LIKE KINASE RELATED TO CHLOROPHYLL DEGRADATION AND OXIDATIVE STRESS 1 {ECO:0000303|PubMed:22447966}; Short=AtACDO1 {ECO:0000303|PubMed:22447966}; AltName: Full=Protein BLEACHING AND DWARF IN RED LIGHT 1 {ECO:0000303|PubMed:25882344}; AltName: Full=Protein PROTON GRADIENT REGULATION 6 {ECO:0000303|PubMed:24267661}; Flags: Precursor;","A0A498HRJ4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72562.1};","Predicted unusual protein kinase","GO:0009507,chloroplast; GO:0005886,plasma membrane; GO:0010287,plastoglobule; GO:0005524,ATP binding; GO:0004672,protein kinase activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006995,cellular response to nitrogen starvation; GO:0015996,chlorophyll catabolic process; GO:0009767,photosynthetic electron transport chain; GO:0080177,plastoglobule organization; GO:1904143,positive regulation of carotenoid biosynthetic process; GO:1902326,positive regulation of chlorophyll biosynthetic process; GO:0006468,protein phosphorylation; GO:0031540,regulation of anthocyanin biosynthetic process; GO:0010109,regulation of photosynthesis; GO:1902171,regulation of tocopherol cyclase activity; GO:0009637,response to blue light; GO:1901562,response to paraquat; GO:0080183,response to photooxidative stress; GO:0010114,response to red light; GO:0009414,response to water deprivation; GO:0010027,thylakoid membrane organization; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006950,response to stress; GO:0007154,cell communication; GO:0008150,biological_process; GO:0009267,cellular response to starvation; GO:0009605,response to external stimulus; GO:0009987,cellular process; GO:0009991,response to extracellular stimulus; GO:0031667,response to nutrient levels; GO:0031668,cellular response to extracellular stimulus; GO:0031669,cellular response to nutrient levels; GO:0033554,cellular response to stress; GO:0042594,response to starvation; GO:0043562,cellular response to nitrogen levels; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071496,cellular response to external stimulus; GO:0006725,cellular aromatic compound metabolic process; GO:0006778,porphyrin-containing compound metabolic process; GO:0006787,porphyrin-containing compound catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0015994,chlorophyll metabolic process; GO:0019439,aromatic compound catabolic process; GO:0033013,tetrapyrrole metabolic process; GO:0033015,tetrapyrrole catabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042440,pigment metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044270,cellular nitrogen compound catabolic process; GO:0046149,pigment catabolic process; GO:0046483,heterocycle metabolic process; GO:0046700,heterocycle catabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0006091,generation of precursor metabolites and energy; GO:0015979,photosynthesis; GO:0019684,photosynthesis, light reaction; GO:0022900,electron transport chain; GO:0006996,organelle organization; GO:0009657,plastid organization; GO:0009658,chloroplast organization; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0016108,tetraterpenoid metabolic process; GO:0016109,tetraterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0016116,carotenoid metabolic process; GO:0016117,carotenoid biosynthetic process; GO:0019216,regulation of lipid metabolic process; GO:0019222,regulation of metabolic process; GO:0019747,regulation of isoprenoid metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0045828,positive regulation of isoprenoid metabolic process; GO:0045834,positive regulation of lipid metabolic process; GO:0046148,pigment biosynthetic process; GO:0046889,positive regulation of lipid biosynthetic process; GO:0046890,regulation of lipid biosynthetic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0080090,regulation of primary metabolic process; GO:1901576,organic substance biosynthetic process; GO:0006779,porphyrin-containing compound biosynthetic process; GO:0010380,regulation of chlorophyll biosynthetic process; GO:0015995,chlorophyll biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0033014,tetrapyrrole biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0090056,regulation of chlorophyll metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901401,regulation of tetrapyrrole metabolic process; GO:1901403,positive regulation of tetrapyrrole metabolic process; GO:1901463,regulation of tetrapyrrole biosynthetic process; GO:1901465,positive regulation of tetrapyrrole biosynthetic process; GO:1901566,organonitrogen compound biosynthetic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0009718,anthocyanin-containing compound biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0009813,flavonoid biosynthetic process; GO:0009962,regulation of flavonoid biosynthetic process; GO:0031537,regulation of anthocyanin metabolic process; GO:0046283,anthocyanin-containing compound metabolic process; GO:0031279,regulation of cyclase activity; GO:0050790,regulation of catalytic activity; GO:0065009,regulation of molecular function; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0006979,response to oxidative stress; GO:0009639,response to red or far red light; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:0010035,response to inorganic substance; GO:1901700,response to oxygen-containing compound; GO:0009668,plastid membrane organization; GO:0061024,membrane organization; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery; GO:0009532,plastid stroma; GO:0009570,chloroplast stroma","PF03109.19:ABC1 atypical kinase-like domain","--","--","--"]
["MS01G08470",3.4421,2.8888,2.061,2.2621,2.0451,1.7337,2.3541,3.7763,2.601,0.6524,1.508,1.0465,1.181,1.3958,0.8443,104,87,61,50,54,44,54,81,71,16,39,32,28,33,20,-1.214110029,0.001603305,0.00431741,"down",-1.006465668,0.005060784,0.010292666,"down",-0.262421172,0.424111643,0.504395664,false,0.335361547,0.313658908,0.393064554,false,1.56223871,"7.75728E-05",0.000460605,"up",1.356803381,0.000199556,0.00173664,"up",0.596254803,0.071583642,0.466661274,false,0.968234814,0.015600572,0.057041839,false,0.769712618,0.034175248,0.166100215,false,"chr_001",7742242,7745530,"+","MS01G08470","--","K10739 replication factor A2 | (RefSeq) replication protein A 32 kDa subunit A (A)","ko03030: DNA replication; ko03420: Nucleotide excision repair; ko03430: Mismatch repair; ko03440: Homologous recombination","hypothetical protein DVH24_012245 [Malus domestica]","RFA2A_ARATH RecName: Full=Replication protein A 32 kDa subunit A; Short=AtRPA32A; Short=RP-A p32 A; AltName: Full=DNA replication protein A2 subunit A; AltName: Full=Protein SUPPRESSOR OF ROS1; AltName: Full=Replication factor A protein 2 A; Short=AtRPA2 A; Short=RF-A protein 2 A; AltName: Full=Replicon protein A2 A;","A0A498HTU6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72561.1};","Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit","GO:0000781,chromosome, telomeric region; GO:0005662,DNA replication factor A complex; GO:0005634,nucleus; GO:0035861,site of double-strand break; GO:0003697,single-stranded DNA binding; GO:0006281,DNA repair; GO:0006260,DNA replication; GO:0000724,double-strand break repair via homologous recombination; GO:0006289,nucleotide-excision repair; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0000725,recombinational repair; GO:0006302,double-strand break repair; GO:0006310,DNA recombination; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005694,chromosome; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0098687,chromosomal region; GO:0110165,cellular anatomical entity; GO:0000228,nuclear chromosome; GO:0005657,replication fork; GO:0030894,replisome; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0032993,protein-DNA complex; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0043596,nuclear replication fork; GO:0043601,nuclear replisome; GO:0070013,intracellular organelle lumen; GO:0140513,nuclear protein-containing complex; GO:0090734,site of DNA damage","PF08784.14:Replication protein A C terminal","--","--","--"]
["MS01G08530",0.2586,0.0649,0.099,0.972,1.9233,0.6541,2.3841,1.6845,2.2539,0.1991,0,0.0958,1.0709,0.537,0.2886,8,2,3,22,52,17,56,37,63,5,0,3,26,13,7,"NA","NA","NA","NA","NA","NA","NA","NA",3.303665926,"8.42393E-06","2.86789E-05","up",4.181789777,"5.03538E-14","4.35094E-13","up",4.546505606,"4.51758E-12","1.0374E-10","up",1.735294138,0.000347946,0.002771653,"up",0.869642618,0.066840632,0.454325185,false,3.662436261,"2.46259E-05",0.000272218,"up",0.871689095,0.176687572,0.447171852,false,"chr_001",7828268,7831315,"-","MS01G08530","--","--","--","hypothetical protein DVH24_012237 [Malus domestica]","BC10_ORYSJ RecName: Full=Glycosyltransferase BC10 {ECO:0000305}; EC=2.4.-.- {ECO:0000269|PubMed:18939965}; AltName: Full=Protein BRITTLE CULM 10 {ECO:0000303|PubMed:18939965}; AltName: Full=Protein FRAGILE CULM 116 {ECO:0000303|PubMed:27708650};","A0A498HUJ7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72553.1};","--","GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0016757,glycosyltransferase activity; GO:0030244,cellulose biosynthetic process; GO:0009664,plant-type cell wall organization; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0030243,cellulose metabolic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF02485.24:Core-2/I-Branching enzyme","--","--","--"]
["MS01G08540",78.431,82.1849,94.306,83.1853,71.0279,100.2538,68.9334,52.1895,60.0771,149.3934,165.9792,175.041,114.1769,165.1359,118.5165,3351,3500,3947,2600,2652,3598,2236,1583,2319,5181,6070,7569,3828,5521,3970,1.130937452,"7.37647E-22","2.06618E-20","up",0.934502959,"6.26322E-08","2.89283E-07",false,0.207336913,0.181306566,0.245707147,false,-0.206459466,0.19212665,0.259018799,false,-1.325374869,"3.86489E-18","1.77647E-16","down",-1.127088363,"1.20754E-08","3.39942E-07","down",-0.416110549,0.018508544,0.270498872,false,-0.90682897,"7.94316E-10","2.69394E-08",false,-0.702590919,0.00036909,0.006174066,false,"chr_001",7833254,7836061,"+","MS01G08540","--","K13120 protein FAM32A | (RefSeq) protein FAM32A-like (A)","--","probable plastid-lipid-associated protein 8, chloroplastic [Malus domestica]","PAP8_ARATH RecName: Full=Probable plastid-lipid-associated protein 8, chloroplastic; AltName: Full=Fibrillin-6; Flags: Precursor;","A0A498HRI6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72552.1};","--","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0010287,plastoglobule; GO:0009579,thylakoid; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0009532,plastid stroma; GO:0009570,chloroplast stroma","PF04755.15:PAP_fibrillin","--","--","--"]
["MS01G08580",0.7123,0.804,0.2954,0.426,0.1274,0.159,0.3225,0.1254,0.3449,0.1645,0.052,0.066,0,0.0284,0.0284,32,36,13,14,5,6,11,4,14,6,2,3,0,1,1,-2.513076687,0.000788933,0.002291218,"down",-4.713777222,"8.44526E-05",0.000242772,"down",-1.158347544,0.09271035,0.137191271,false,-0.913058939,0.146124144,0.205201476,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",7843543,7847416,"+","MS01G08580","--","K25656 cryptochrome | (RefSeq) cryptochrome DASH, chloroplastic/mitochondrial (A)","--","cryptochrome DASH, chloroplastic/mitochondrial [Malus sylvestris]","CRYD_SOLLC RecName: Full=Cryptochrome DASH, chloroplastic/mitochondrial {ECO:0000303|PubMed:16876787}; AltName: Full=Cryptochrome-3 {ECO:0000303|PubMed:16876787}; AltName: Full=Protein CRY-DASH {ECO:0000303|PubMed:16876787}; Flags: Precursor;","A0A540LBN7_MALBA RecName: Full=Cryptochrome DASH {ECO:0000256|RuleBase:RU367151};","Deoxyribodipyrimidine photolyase/cryptochrome","GO:0009507,chloroplast; GO:0005739,mitochondrion; GO:0003677,DNA binding; GO:0003913,DNA photolyase activity; GO:0071949,FAD binding; GO:0000719,photoreactive repair; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016830,carbon-carbon lyase activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0000166,nucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0050660,flavin adenine dinucleotide binding; GO:1901265,nucleoside phosphate binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006281,DNA repair; GO:0006290,pyrimidine dimer repair; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03441.17:FAD binding domain of DNA photolyase","--","--","--"]
["MS01G08610",5.8231,6.6682,6.0645,2.1709,4.0384,2.7309,2.0918,3.0655,1.6927,7.971,4.4667,4.8237,4.8722,4.7355,6.1519,99,113,101,27,60,39,27,37,26,110,65,83,65,63,82,0.09003647,0.771186039,0.831529577,false,0.055737548,0.815846491,0.857751043,false,-0.82527676,0.011143846,0.021004277,false,-1.162167843,0.000374286,0.000936502,"down",-1.235200617,0.002430979,0.009317823,"down",-1.201941231,0.000501617,0.003737545,"down",-0.333988026,0.445620399,0.827869626,false,-0.898678813,0.027612714,0.088135002,false,-0.853636267,0.013923831,0.090596418,false,"chr_001",7868784,7869960,"-","MS01G08610","--","K24772 guanine nucleotide-binding protein subunit gamma 1/2, plant | (RefSeq) guanine nucleotide-binding protein subunit gamma 1-like (A)","--","guanine nucleotide-binding protein subunit gamma 1-like [Malus sylvestris]","GG2_ORYSI RecName: Full=Guanine nucleotide-binding protein subunit gamma 2 {ECO:0000305}; AltName: Full=Ggamma-subunit 2 {ECO:0000305}; AltName: Full=Heterotrimeric G protein gamma-subunit 2 {ECO:0000305};","A0A498HSV2_MALDO RecName: Full=G protein gamma domain-containing protein {ECO:0000259|Pfam:PF00631};","--","GO:0005886,plasma membrane; GO:0007186,G protein-coupled receptor signaling pathway; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF00631.25:GGL domain","--","--","--"]
["MS01G08620",6.4943,7.7001,7.9212,4.3811,3.957,5.3216,6.5545,4.7522,7.6551,3.429,3.3502,3.1668,3.4394,3.7724,3.7652,77,91,92,38,41,53,59,40,82,33,34,38,32,35,35,-0.967153631,0.000529553,0.001605994,false,-0.717336193,0.010386677,0.019634641,false,-0.483166253,0.080090296,0.120794449,false,0.063635665,0.818513452,0.859176318,false,1.042308037,0.001262626,0.005307215,"up",0.796453052,0.013263902,0.05283604,false,0.545006128,0.082660731,0.493773629,false,0.499892746,0.12789087,0.274264419,false,0.259200133,0.419617165,0.698342305,false,"chr_001",7871450,7872284,"+","MS01G08620","--","K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] | (RefSeq) uncharacterized protein LOC103424852 (A)","--","hypothetical protein DVH24_012230 [Malus domestica]","--","A0A498HM68_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72546.1};","Putative SAM dependent methyltransferases","GO:0008168,methyltransferase activity; GO:0032259,methylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016741,transferase activity, transferring one-carbon groups; GO:0008150,biological_process; GO:0008152,metabolic process","PF01795.22:MraW methylase family","--","--","--"]
["MS01G08680",6.0103,7.3357,4.5724,5.9657,5.3882,8.6136,2.7734,2.6962,4.534,4.7635,5.9484,7.2625,5.1713,8.3168,6.6407,157,191,117,114,123,189,55,50,107,101,133,192,106,170,136,0.186604911,0.483613281,0.58205743,false,0.453483016,0.091462337,0.135659488,false,0.358595356,0.202762044,0.270537101,false,-0.565243804,0.065905746,0.102480237,false,-0.734934622,0.012623111,0.03727748,false,-1.000197761,0.000795175,0.00549024,"down",-0.921506042,0.002215155,0.090124343,false,0.189512559,0.470144732,0.655179112,false,-0.070335137,0.793518819,0.920822013,false,"chr_001",7935108,7937908,"-","MS01G08680","--","K02516 type II protein arginine methyltransferase [EC:2.1.1.320] | (RefSeq) protein arginine N-methyltransferase 1.5 isoform X2 (A)","--","hypothetical protein DVH24_034852 [Malus domestica]","ACS_ARATH RecName: Full=Acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal; EC=6.2.1.1; AltName: Full=Acetate--CoA ligase; AltName: Full=Acetyl-CoA synthetase; Flags: Precursor;","A0A498IIX5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH81431.1};","Acyl-CoA synthetase","GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0005829,cytosol; GO:0009514,glyoxysome; GO:0009536,plastid; GO:0003987,acetate-CoA ligase activity; GO:0016208,AMP binding; GO:0005524,ATP binding; GO:0006083,acetate metabolic process; GO:0006085,acetyl-CoA biosynthetic process; GO:0019427,acetyl-CoA biosynthetic process from acetate; GO:0006631,fatty acid metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016405,CoA-ligase activity; GO:0016874,ligase activity; GO:0016877,ligase activity, forming carbon-sulfur bonds; GO:0016878,acid-thiol ligase activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0043169,cation binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0006082,organic acid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0006084,acetyl-CoA metabolic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006163,purine nucleotide metabolic process; GO:0006164,purine nucleotide biosynthetic process; GO:0006637,acyl-CoA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009058,biosynthetic process; GO:0009117,nucleotide metabolic process; GO:0009150,purine ribonucleotide metabolic process; GO:0009152,purine ribonucleotide biosynthetic process; GO:0009165,nucleotide biosynthetic process; GO:0009259,ribonucleotide metabolic process; GO:0009260,ribonucleotide biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0019693,ribose phosphate metabolic process; GO:0033865,nucleoside bisphosphate metabolic process; GO:0033866,nucleoside bisphosphate biosynthetic process; GO:0033875,ribonucleoside bisphosphate metabolic process; GO:0034030,ribonucleoside bisphosphate biosynthetic process; GO:0034032,purine nucleoside bisphosphate metabolic process; GO:0034033,purine nucleoside bisphosphate biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0035383,thioester metabolic process; GO:0035384,thioester biosynthetic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044272,sulfur compound biosynthetic process; GO:0046390,ribose phosphate biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071616,acyl-CoA biosynthetic process; GO:0072521,purine-containing compound metabolic process; GO:0072522,purine-containing compound biosynthetic process; GO:0090407,organophosphate biosynthetic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901293,nucleoside phosphate biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006629,lipid metabolic process; GO:0044255,cellular lipid metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma; GO:0005777,peroxisome; GO:0042579,microbody","--","--","--","--"]
["MS01G08700",10.0768,8.2392,10.6963,3.7421,4.3747,7.0798,3.8855,4.7868,6.9743,3.8959,5.5141,4.5935,2.9773,3.5285,4.0936,427,348,444,116,162,252,125,144,267,134,200,197,99,117,136,-0.867379572,"4.9985E-06","2.29864E-05",false,-1.160968305,"4.00111E-09","2.15031E-08","down",-0.725854418,0.005408596,0.010938379,false,-0.611716279,0.010241734,0.019450467,false,0.269082565,0.306613891,0.457104764,false,0.566279175,0.033904189,0.108341543,false,0.114049837,0.715685014,0.927609466,false,0.157491537,0.573787708,0.73954802,false,0.459899322,0.104438028,0.332469653,false,"chr_001",7981686,8047423,"-","MS01G08700","--","K02516 type II protein arginine methyltransferase [EC:2.1.1.320] | (RefSeq) protein arginine N-methyltransferase 1.5-like isoform X1 (A)","--","protein arginine N-methyltransferase 1.5-like [Pyrus ussuriensis x Pyrus communis]","ANM15_ARATH RecName: Full=Protein arginine N-methyltransferase 1.5; Short=AtPMRT15; Short=AtPMRT5; EC=2.1.1.319; AltName: Full=Shk1 kinase-binding protein 1 homolog;","A0A5N5GV35_9ROSA RecName: Full=Protein arginine N-methyltransferase {ECO:0000256|PIRNR:PIRNR015894};","Protein kinase inhibitor","GO:0005829,cytosol; GO:0005634,nucleus; GO:0008469,histone-arginine N-methyltransferase activity; GO:0008276,protein methyltransferase activity; GO:0035242,protein-arginine omega-N asymmetric methyltransferase activity; GO:0006325,chromatin organization; GO:0034969,histone arginine methylation; GO:0043985,histone H4-R3 methylation; GO:0035246,peptidyl-arginine N-methylation; GO:0010220,positive regulation of vernalization response; GO:0009909,regulation of flower development; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008168,methyltransferase activity; GO:0008170,N-methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0016273,arginine N-methyltransferase activity; GO:0016274,protein-arginine N-methyltransferase activity; GO:0016740,transferase activity; GO:0016741,transferase activity, transferring one-carbon groups; GO:0042054,histone methyltransferase activity; GO:0140096,catalytic activity, acting on a protein; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0006479,protein methylation; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0008213,protein alkylation; GO:0016570,histone modification; GO:0016571,histone methylation; GO:0018193,peptidyl-amino acid modification; GO:0018195,peptidyl-arginine modification; GO:0018216,peptidyl-arginine methylation; GO:0019538,protein metabolic process; GO:0032259,methylation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043414,macromolecule methylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009409,response to cold; GO:0009628,response to abiotic stimulus; GO:0010048,vernalization response; GO:0010219,regulation of vernalization response; GO:0048518,positive regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048580,regulation of post-embryonic development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048831,regulation of shoot system development; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF05185.19:PRMT5 arginine-N-methyltransferase","--","--","--"]
["MS01G08720",6.1811,6.5825,6.8013,1.0389,1.2755,1.9301,1.3681,0.9991,0.8132,1.9038,2.3973,1.2765,1.3559,1.3273,1.1632,244,259,263,30,44,64,41,28,29,61,81,51,42,41,36,-1.632839244,"1.45934E-10","1.3306E-09","down",-2.053101797,"2.33972E-20","3.61067E-19","down",-1.990056155,"1.6791E-14","1.72046E-13","down",-2.343000419,"1.95366E-18","2.39084E-17","down",-0.697398279,0.074306065,0.156990561,false,-0.271471997,0.4552435,0.643738037,false,-0.345777552,0.383236464,0.798079941,false,-0.350686316,0.359308927,0.550205119,false,0.085324325,0.806999114,0.926611493,false,"chr_001",8063989,8066841,"+","MS01G08720","--","K19893 glucan endo-1,3-beta-glucosidase 5/6 [EC:3.2.1.39] | (RefSeq) glucan endo-1,3-beta-glucosidase 5 (A)","ko00500: Starch and sucrose metabolism; ko01100: Metabolic pathways","glucan endo-1,3-beta-glucosidase 5-like [Malus sylvestris]","E135_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 5; EC=3.2.1.39; AltName: Full=(1->3)-beta-glucan endohydrolase 5; Short=(1->3)-beta-glucanase 5; AltName: Full=Beta-1,3-endoglucanase 5; Short=Beta-1,3-glucanase 5; Flags: Precursor;","A0A540LBE6_MALBA RecName: Full=Glucan endo-1,3-beta-D-glucosidase {ECO:0000256|ARBA:ARBA00012780}; EC=3.2.1.39 {ECO:0000256|ARBA:ARBA00012780}; AltName: Full=(1->3)-beta-glucan endohydrolase {ECO:0000256|ARBA:ARBA00033335}; AltName: Full=Beta-1,3-endoglucanase {ECO:0000256|ARBA:ARBA00033417};","--","GO:0031225,anchored component of membrane; GO:0046658,anchored component of plasma membrane; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0005773,vacuole; GO:0042973,glucan endo-1,3-beta-D-glucosidase activity; GO:0005975,carbohydrate metabolic process; GO:0006952,defense response; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0008422,beta-glucosidase activity; GO:0015926,glucosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0031226,intrinsic component of plasma membrane; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00332.21:Glycosyl hydrolases family 17","--","--","--"]
["MS01G08760",1.1674,1.0844,0.4193,1.0343,1.4596,1.364,1.5092,1.5835,1.4118,0.3995,1.1366,0.5767,0.3306,0.7459,0.7169,54,50,19,35,59,53,53,52,59,15,45,27,12,27,26,-0.176556276,0.744254822,0.810251778,false,-0.297388704,0.566153378,0.641199092,false,0.740039874,0.10135361,0.148349809,false,1.028352388,0.014726665,0.026979388,"up",1.214108271,0.003849595,0.013808763,"up",1.338627724,0.000515645,0.003826611,"up",0.281889818,0.358189704,0.783376174,false,0.930205694,0.0397381,0.116042119,false,1.062462884,0.010720739,0.075605367,false,"chr_001",8131068,8137482,"+","MS01G08760","--","K21867 potassium channel | (RefSeq) potassium channel KAT3 (A)","--","potassium channel KAT3-like [Malus sylvestris]","KAT3_ARATH RecName: Full=Potassium channel KAT3; AltName: Full=AKT4; AltName: Full=AtKC1; AltName: Full=Potassium channel TKC;","A0A5N5GZE7_9ROSA RecName: Full=Potassium channel {ECO:0000256|RuleBase:RU369015};","K+-channel ERG and related proteins, contain PAS/PAC sensor domain","GO:0005783,endoplasmic reticulum; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005249,voltage-gated potassium channel activity; GO:0071805,potassium ion transmembrane transport; GO:0034765,regulation of ion transmembrane transport; GO:0009624,response to nematode; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005216,ion channel activity; GO:0005244,voltage-gated ion channel activity; GO:0005261,cation channel activity; GO:0005267,potassium channel activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015079,potassium ion transmembrane transporter activity; GO:0015267,channel activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022803,passive transmembrane transporter activity; GO:0022832,voltage-gated channel activity; GO:0022836,gated channel activity; GO:0022843,voltage-gated cation channel activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0046873,metal ion transmembrane transporter activity; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0006813,potassium ion transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0030001,metal ion transport; GO:0034220,ion transmembrane transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0098655,cation transmembrane transport; GO:0098660,inorganic ion transmembrane transport; GO:0098662,inorganic cation transmembrane transport; GO:0032879,regulation of localization; GO:0034762,regulation of transmembrane transport; GO:0043269,regulation of ion transport; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051049,regulation of transport; GO:0065007,biological regulation; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery","PF00520.34:Ion transport protein","--","--","--"]
["MS01G08780",4.4841,5.1762,3.9434,25.1096,22.5341,12.1881,38.1782,47.3348,16.385,19.6016,12.9392,13.4254,14.2861,10.3563,11.2666,166,191,143,680,729,379,1073,1244,548,589,410,503,415,300,327,1.950782913,"5.12579E-15","7.70067E-14","up",1.69391387,"2.00981E-15","2.08953E-14","up",2.362340121,"7.06414E-14","6.79188E-13","up",3.203905086,"1.9408E-18","2.37608E-17","up",1.263839829,0.001091842,0.004675139,"up",1.521506395,"2.28733E-05",0.000277255,"up",0.835517285,0.049215281,0.398582933,false,0.430577634,0.199680614,0.372066503,false,0.695032613,0.025843085,0.138159649,false,"chr_001",8152400,8154087,"+","MS01G08780","--","--","--","FCS-Like Zinc finger 10-like [Malus sylvestris]","FLZ10_ARATH RecName: Full=FCS-Like Zinc finger 10 {ECO:0000303|PubMed:24901469};","A0A498HM47_MALDO RecName: Full=FLZ-type domain-containing protein {ECO:0000259|PROSITE:PS51795};","--","GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005634,nucleus; GO:0019900,kinase binding; GO:0046872,metal ion binding; GO:1902074,response to salt; GO:0042594,response to starvation; GO:0090351,seedling development; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0008150,biological_process; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0006950,response to stress; GO:0009605,response to external stimulus; GO:0009991,response to extracellular stimulus; GO:0031667,response to nutrient levels; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF04570.17:zinc-finger of the FCS-type, C2-C2","--","--","--"]
["MS01G08790",509.0157,413.927,524.8712,3048.3388,2774.8159,3137.7698,3500.6708,2425.8131,2757.496,2952.8995,3057.6786,3286.3066,2958.8384,3187.7114,2814.2031,10499,8510,10605,45996,50016,54364,54818,35521,51385,49438,53983,68602,47890,51450,45509,2.870502666,"9.0179E-102","9.1892E-99","up",2.923233676,"4.8745E-102","1.8225E-99","up",2.844013672,"3.18235E-92","1.41477E-89","up",2.871125201,"6.20649E-52","4.38582E-50","up",0.012371169,0.944051912,0.967053838,false,-0.038473469,0.827579155,0.905845975,false,0.023418635,0.895936213,0.975648107,false,-0.009100188,0.930899168,0.965013734,false,-0.054083628,0.637866097,0.840721469,false,"chr_001",8155279,8157487,"-","MS01G08790","--","K10144 RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27] | (RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase RZFP34 (A)","ko04120: Ubiquitin mediated proteolysis","LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase RZFP34 [Malus domestica]","ZFP34_ORYSJ RecName: Full=Probable E3 ubiquitin-protein ligase RZFP34 {ECO:0000305}; EC=2.3.2.27 {ECO:0000305}; AltName: Full=OsRFP1 {ECO:0000303|Ref.1}; AltName: Full=RING zinc-finger protein 34 {ECO:0000303|PubMed:25002225}; Short=OsRZFP34 {ECO:0000303|PubMed:25002225};","A0A5N5GU72_9ROSA SubName: Full=RING finger and CHY zinc finger domain-containing protein 1-like {ECO:0000313|EMBL:KAB2619159.1};","Zn-finger protein","GO:0005634,nucleus; GO:0061630,ubiquitin protein ligase activity; GO:0008270,zinc ion binding; GO:0016567,protein ubiquitination; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004842,ubiquitin-protein transferase activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0061659,ubiquitin-like protein ligase activity; GO:0140096,catalytic activity, acting on a protein; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006508,proteolysis; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009987,cellular process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF14599.9:Zinc-ribbon","--","--","--"]
["MS01G08800",315.9592,275.629,352.217,2409.2079,2018.3689,2198.1547,2164.2563,1637.3376,1869.7354,2005.5042,2070.9635,2411.4988,2038.8775,2371.5858,1975.2563,2261,1966,2469,12612,12622,13213,11758,8318,12088,11649,12685,17465,11449,13280,11082,2.969145915,"3.34207E-97","2.90475E-94","up",3.051983679,"2.7105E-104","1.0397E-101","up",3.027561678,"9.89832E-93","4.46714E-90","up",2.873348321,"4.62603E-67","5.68696E-65","up",-0.083594977,0.602356137,0.729109208,false,-0.164695709,0.308108088,0.50397654,false,-0.15718358,0.335641448,0.769805697,false,0.076016627,0.58499588,0.74749181,false,0.000501491,0.997183204,0.99929756,false,"chr_001",8158219,8158524,"-","MS01G08800","--","--","--","--","--","--","--","--","--","--","--","--"]
["MS01G08810",1.1837,1.7608,1.625,5.0587,4.5616,5.9929,6.1647,5.0786,6.6863,3.8049,3.2426,3.0516,8.1316,4.8335,4.5639,87,129,117,272,293,370,344,265,444,227,204,227,469,278,263,1.335076762,"1.08904E-08","7.68804E-08","up",2.240388366,"5.09212E-15","5.10196E-14","up",1.983930952,"1.14298E-19","1.87059E-18","up",2.254766469,"1.15054E-25","2.2445E-24","up",0.934050665,"2.09284E-06","1.82304E-05",false,0.030918656,0.907973338,0.949625434,false,0.269784268,0.13269166,0.583775559,false,0.66685991,0.000725727,0.004799912,false,-0.229903401,0.397269712,0.678748849,false,"chr_001",8162126,8165268,"-","MS01G08810","--","--","--","leucine-rich repeat extensin-like protein 4 [Malus domestica]","LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precursor;","A0A540L4C7_MALBA RecName: Full=LRRNT_2 domain-containing protein {ECO:0000259|Pfam:PF08263};","--","GO:0005576,extracellular region; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0005199,structural constituent of cell wall; GO:0071555,cell wall organization; GO:0003674,molecular_function; GO:0005198,structural molecule activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0005618,cell wall; GO:0030312,external encapsulating structure; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF13855.9:Leucine rich repeat","--","--","--"]
["MS01G08820",1.0515,0.7033,0.7156,0.7985,2.2728,3.3382,2.0006,0.9874,3.7503,1.2954,1.365,2.6551,3.2756,3.5834,3.8745,9,6,6,5,17,24,13,6,29,9,10,23,22,24,26,"NA","NA","NA","NA",2.408393056,"3.75521E-06","1.34609E-05","up","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-0.656074691,0.218964959,0.404581513,false,0.136764382,0.84559398,0.963897017,false,"NA","NA","NA","NA",-0.790467429,0.145785646,0.401558832,false,"chr_001",8165749,8166224,"-","MS01G08820","--","--","--","uncharacterized protein LOC18794019 isoform X2 [Prunus persica]","--","A0A5B7BVK5_DAVIN SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:MPA72942.1};","--","--","--","--","--","--"]
["MS01G08830",2.7184,1.8692,3.3987,5.9706,6.2563,7.127,6.9601,5.5071,8.0801,3.7253,5.4597,5.3116,6.5003,6.9479,4.5581,89,61,109,143,179,196,173,128,239,99,153,176,167,178,117,1.045862519,0.000195637,0.000657411,"up",1.47072286,"2.55419E-07","1.07992E-06","up",1.493964121,"1.33775E-08","6.92137E-08","up",1.647902901,"1.30362E-09","7.12264E-09","up",0.613945819,0.009206894,0.028761798,false,0.193076916,0.438521426,0.629256076,false,0.15268017,0.471999488,0.84334281,false,0.463708289,0.034501534,0.104413118,false,0.049493693,0.832994984,0.937622537,false,"chr_001",8169749,8171614,"-","MS01G08830","--","--","--","uncharacterized protein LOC126604370 isoform X4 [Malus sylvestris]","--","A0A540L4Y4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD81322.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G08840",1.1403,0.8481,0.6824,0.2419,0.1575,0.1404,0.0777,0.2769,0.1741,0.218,0.2297,0.2137,0.2505,0.1759,0.4263,58,43,34,9,7,6,3,10,8,9,10,11,10,7,17,-1.833573194,"7.38148E-05",0.000270599,"down",-1.36076299,0.005048289,0.010268667,"down",-2.108136873,"5.02057E-05",0.000149797,"down",-2.069727693,0.000194845,0.000512433,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",8194073,8198290,"-","MS01G08840","--","K15044 Arf-GAP domain and FG repeats-containing protein 1 | (RefSeq) probable ADP-ribosylation factor GTPase-activating protein AGD14 (A)","--","hypothetical protein DVH24_012204 [Malus domestica]","AGD14_ARATH RecName: Full=Probable ADP-ribosylation factor GTPase-activating protein AGD14; Short=ARF GAP AGD14; AltName: Full=Protein ARF-GAP DOMAIN 14; Short=AtAGD14; AltName: Full=Protein ZIGA4;","A0A498HP63_MALDO RecName: Full=Arf-GAP domain-containing protein {ECO:0000259|PROSITE:PS50115};","Predicted GTPase-activating protein","GO:0005096,GTPase activator activity; GO:0046872,metal ion binding; GO:0003674,molecular_function; GO:0008047,enzyme activator activity; GO:0030234,enzyme regulator activity; GO:0030695,GTPase regulator activity; GO:0060589,nucleoside-triphosphatase regulator activity; GO:0098772,molecular function regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding","PF01412.21:Putative GTPase activating protein for Arf","--","--","--"]
["MS01G08880",0.3655,0.4482,0.4629,0.2683,0.364,0.3465,0.1159,0.1716,0.2023,0.3252,0.34,0.2006,0.276,0.2854,0.2849,54,66,67,29,47,43,13,18,27,39,43,30,32,33,33,-0.379756884,0.255201464,0.347372568,false,-0.299136838,0.322304455,0.401955188,false,-0.161516301,0.602852628,0.672178198,false,-1.09550466,0.002949193,0.0062736,"down",-0.707889258,0.107829122,0.208935473,false,-0.78002829,0.052977642,0.14994889,false,-0.935273758,0.021812104,0.288166948,false,0.231693851,0.545658607,0.718435782,false,0.163858369,0.630283124,0.838421444,false,"chr_001",8228152,8244052,"+","MS01G08880","--","--","--","uncharacterized protein LOC103400231 [Malus domestica]","TI236_ARATH RecName: Full=Protein TIC236, chloroplastic {ECO:0000305}; AltName: Full=236 kDa translocon at the inner-envelope-membrane of chloroplasts {ECO:0000305}; AltName: Full=Protein EMBRYO DEFECTIVE 2410 {ECO:0000303|PubMed:15266054}; Flags: Precursor;","A0A540L4C3_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD81315.1};","--","GO:0009501,amyloplast; GO:0009706,chloroplast inner membrane; GO:0031972,chloroplast intermembrane space; GO:0005887,integral component of plasma membrane; GO:0009660,amyloplast organization; GO:0009306,protein secretion; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0006810,transport; GO:0008104,protein localization; GO:0015031,protein transport; GO:0032940,secretion by cell; GO:0033036,macromolecule localization; GO:0035592,establishment of protein localization to extracellular region; GO:0045184,establishment of protein localization; GO:0046903,secretion; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0071692,protein localization to extracellular region; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0140352,export from cell; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009528,plastid inner membrane; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031969,chloroplast membrane; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0009529,plastid intermembrane space; GO:0031970,organelle envelope lumen; GO:0031974,membrane-enclosed lumen; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0005886,plasma membrane; GO:0016021,integral component of membrane; GO:0031224,intrinsic component of membrane; GO:0031226,intrinsic component of plasma membrane; GO:0071944,cell periphery","PF04357.16:TamB, inner membrane protein subunit of TAM complex","--","--","--"]
["MS01G08890",12.4925,9.8069,10.9035,2.6312,2.8936,4.6279,2.6845,1.967,4.0104,4.2312,6.4817,5.3327,3.7996,3.1833,3.3697,331,259,283,51,67,103,54,37,96,91,147,143,79,66,70,-0.868152648,"4.26111E-05",0.000163384,false,-1.388644268,"7.54606E-11","4.95747E-10","down",-1.501135038,"1.01834E-08","5.35622E-08","down",-1.655474928,"1.56493E-09","8.47256E-09","down",-0.775365746,0.014377685,0.041505336,false,-0.251689183,0.430433913,0.622124804,false,-0.156462439,0.664359239,0.913498045,false,-0.61743286,0.039182424,0.114880341,false,-0.088270885,0.76746228,0.908771338,false,"chr_001",8245169,8247632,"-","MS01G08890","--","--","--","psbP domain-containing protein 5, chloroplastic-like [Malus sylvestris]","PPD5_ARATH RecName: Full=PsbP domain-containing protein 5, chloroplastic; AltName: Full=OEC23-like protein 6; AltName: Full=PsbP-related thylakoid lumenal protein 4; AltName: Full=Thylakoid lumenal 35.8 kDa protein; Flags: Precursor;","A0A540L4C1_MALBA RecName: Full=PsbP domain-containing protein {ECO:0000259|Pfam:PF01789};","--","GO:0009507,chloroplast; GO:0009543,chloroplast thylakoid lumen; GO:0009535,chloroplast thylakoid membrane; GO:0019898,extrinsic component of membrane; GO:0009654,photosystem II oxygen evolving complex; GO:0005886,plasma membrane; GO:0009579,thylakoid; GO:0031977,thylakoid lumen; GO:0005509,calcium ion binding; GO:0015979,photosynthesis; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0044237,cellular metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009534,chloroplast thylakoid; GO:0031976,plastid thylakoid; GO:0031978,plastid thylakoid lumen; GO:0031984,organelle subcompartment; GO:0009526,plastid envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane; GO:0009521,photosystem; GO:0009523,photosystem II; GO:0032991,protein-containing complex; GO:0098796,membrane protein complex; GO:1902494,catalytic complex; GO:1990204,oxidoreductase complex; GO:0071944,cell periphery","PF01789.19:PsbP","--","--","--"]
["MS01G08910",18.0625,16.6289,18.6329,65.6648,44.4047,53.1177,63.662,52.595,51.652,31.3904,31.4686,31.9517,36.8803,35.9726,30.8974,1712,1571,1730,4553,3678,4229,4581,3539,4423,2415,2553,3065,2743,2668,2296,1.018305612,"5.41425E-21","1.4134E-19","up",1.254561482,"5.57121E-21","8.92876E-20","up",1.827249785,"3.07023E-24","7.23495E-23","up",1.94189615,"1.82994E-36","6.52767E-35","up",0.93543579,"3.60533E-10","6.28301E-09",false,0.701267401,"1.94629E-05",0.000242284,false,0.112689152,0.567777459,0.880293666,false,0.825512982,"3.02364E-06","4.39488E-05",false,0.597093726,0.001386114,0.017298654,false,"chr_001",8251580,8258775,"-","MS01G08910","--","K03145 transcription elongation factor S-II | (RefSeq) transcription elongation factor TFIIS-like (A)","--","hypothetical protein DVH24_012198 [Malus domestica]","RDO2_ARATH RecName: Full=Transcription elongation factor TFIIS {ECO:0000305}; AltName: Full=Protein REDUCED DORMANCY 2 {ECO:0000303|PubMed:21799800};","A0A498HQF7_MALDO RecName: Full=TFIIS central domain-containing protein {ECO:0000259|PROSITE:PS51321};","Predicted transcription factor DATF1, contains PHD and TFS2M domains","GO:0005634,nucleus; GO:0003746,translation elongation factor activity; GO:0008270,zinc ion binding; GO:0009910,negative regulation of flower development; GO:0034243,regulation of transcription elongation by RNA polymerase II; GO:0009739,response to gibberellin; GO:0010162,seed dormancy process; GO:0009845,seed germination; GO:0006368,transcription elongation by RNA polymerase II promoter; GO:0006351,DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0008135,translation factor activity, RNA binding; GO:0045182,translation regulator activity; GO:0090079,translation regulator activity, nucleic acid binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0009909,regulation of flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048519,negative regulation of biological process; GO:0048580,regulation of post-embryonic development; GO:0048581,negative regulation of post-embryonic development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048831,regulation of shoot system development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051093,negative regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0051241,negative regulation of multicellular organismal process; GO:0061458,reproductive system development; GO:0065007,biological regulation; GO:0090567,reproductive shoot system development; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:2000242,negative regulation of reproductive process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006354,DNA-templated transcription elongation; GO:0006355,regulation of DNA-templated transcription; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0032784,regulation of DNA-templated transcription elongation; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:1901700,response to oxygen-containing compound; GO:0010154,fruit development; GO:0010431,seed maturation; GO:0021700,developmental maturation; GO:0022611,dormancy process; GO:0032504,multicellular organism reproduction; GO:0048316,seed development; GO:0048609,multicellular organismal reproductive process; GO:0071695,anatomical structure maturation; GO:0090351,seedling development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF07500.17:Transcription factor S-II (TFIIS), central domain","--","--","--"]
["MS01G08930",1.3337,1.0314,0.936,0.1519,0.1272,0.43,0.2928,0.1957,0.0615,0.3765,0.3895,0.2471,0.4957,0.4261,0.3544,48,37,33,4,4,13,8,5,2,11,12,9,14,12,10,-1.532650737,0.000874687,0.002509991,"down",-1.080178272,0.014763849,0.026963446,"down",-2.015607711,0.000474783,0.0011863,"down",-2.329488494,0.000134603,0.00036404,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",8278417,8280197,"+","MS01G08930","--","K11584 serine/threonine-protein phosphatase 2A regulatory subunit B' | (RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like (A)","ko03015: mRNA surveillance pathway","serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like [Malus sylvestris]","2A5K_ARATH RecName: Full=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform; Short=AtB' kappa; Short=PP2A, B' subunit, kappa isoform;","A0A498HTQ3_MALDO RecName: Full=Serine/threonine protein phosphatase 2A regulatory subunit {ECO:0000256|PIRNR:PIRNR028043};","Serine/threonine protein phosphatase 2A, regulatory subunit","GO:0005737,cytoplasm; GO:0000159,protein phosphatase type 2A complex; GO:0019888,protein phosphatase regulator activity; GO:0007165,signal transduction; GO:0003674,molecular_function; GO:0019208,phosphatase regulator activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0007154,cell communication; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0008287,protein serine/threonine phosphatase complex; GO:0032991,protein-containing complex; GO:1902494,catalytic complex; GO:1903293,phosphatase complex","PF01603.23:Protein phosphatase 2A regulatory B subunit (B56 family)","--","--","--"]
["MS01G08940",3.2131,2.9818,1.3667,0,0.0919,0.0638,0,0.0754,0.2371,0.8907,0.7508,0.8995,0.2389,0.5475,0.2732,120,111,50,0,3,2,0,2,8,27,24,34,7,16,8,-1.391015232,0.000724397,0.002123676,"down",-2.554112522,"3.18425E-07","1.32862E-06","down",-5.331692634,"3.18173E-11","2.29915E-10","down",-4.27135836,"9.30084E-10","5.1865E-09","down",-2.871175117,0.000189367,0.001014362,"down","NA","NA","NA","NA","NA","NA","NA","NA",-3.922302712,"2.22636E-06","3.33331E-05","down","NA","NA","NA","NA","chr_001",8281695,8285004,"-","MS01G08940","--","K06627 cyclin-A | (RefSeq) cyclin-A2-2-like (A)","--","cyclin-A2-2 isoform X2 [Pyrus x bretschneideri]","CCA21_ARATH RecName: Full=Cyclin-A2-1; AltName: Full=Cyc3a-At; AltName: Full=Cyclin-3a; AltName: Full=G2/mitotic-specific cyclin-A2-1; Short=CycA2;1;","A0A498HP53_MALDO RecName: Full=B-like cyclin {ECO:0000256|ARBA:ARBA00032263};","G2/Mitotic-specific cyclin A","GO:0000307,cyclin-dependent protein kinase holoenzyme complex; GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0016538,cyclin-dependent protein serine/threonine kinase regulator activity; GO:0051301,cell division; GO:0044772,mitotic cell cycle phase transition; GO:0000079,regulation of cyclin-dependent protein serine/threonine kinase activity; GO:0003674,molecular_function; GO:0019207,kinase regulator activity; GO:0019887,protein kinase regulator activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0000278,mitotic cell cycle; GO:0007049,cell cycle; GO:0022402,cell cycle process; GO:0044770,cell cycle phase transition; GO:1903047,mitotic cell cycle process; GO:0001932,regulation of protein phosphorylation; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019220,regulation of phosphate metabolic process; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031399,regulation of protein modification process; GO:0036211,protein modification process; GO:0042325,regulation of phosphorylation; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043549,regulation of kinase activity; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0045859,regulation of protein kinase activity; GO:0050789,regulation of biological process; GO:0050790,regulation of catalytic activity; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051174,regulation of phosphorus metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051338,regulation of transferase activity; GO:0051726,regulation of cell cycle; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0065009,regulation of molecular function; GO:0071704,organic substance metabolic process; GO:0071900,regulation of protein serine/threonine kinase activity; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1904029,regulation of cyclin-dependent protein kinase activity; GO:0005575,cellular_component; GO:0032991,protein-containing complex; GO:0061695,transferase complex, transferring phosphorus-containing groups; GO:1902494,catalytic complex; GO:1902554,serine/threonine protein kinase complex; GO:1902911,protein kinase complex; GO:1990234,transferase complex; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00134.26:Cyclin, N-terminal domain","--","--","--"]
["MS01G08950",7.8534,9.9268,10.2421,2.2228,1.9003,3.3773,2.3696,1.9006,3.7911,3.5803,4.0015,3.897,2.8658,3.2717,3.2654,227,286,290,47,48,82,52,39,99,84,99,114,65,74,74,-1.099944767,"2.43894E-08","1.63617E-07","down",-1.281921898,"9.64643E-10","5.61431E-09","down",-1.693436811,"1.53001E-10","1.0209E-09","down",-1.512398185,"4.70076E-08","2.10741E-07","down",-0.399367014,0.190528648,0.322440082,false,-0.21435155,0.496713795,0.679531384,false,0.179308932,0.622582775,0.89987916,false,-0.577236585,0.043794468,0.125019466,false,-0.387086578,0.190915945,0.465582277,false,"chr_001",8303421,8306640,"-","MS01G08950","--","--","--","photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Malus domestica]","PNSB3_ARATH RecName: Full=Photosynthetic NDH subunit of subcomplex B 3, chloroplastic {ECO:0000303|PubMed:21785130}; Short=Protein PnsB3 {ECO:0000303|PubMed:21785130}; AltName: Full=NDH-DEPENDENT CYCLIC ELECTRON FLOW 4 {ECO:0000303|PubMed:18785996}; Flags: Precursor;","A0A498HNP5_MALDO RecName: Full=2Fe-2S ferredoxin-type domain-containing protein {ECO:0000259|Pfam:PF00111};","--","GO:0009535,chloroplast thylakoid membrane; GO:0005829,cytosol; GO:0010598,NAD(P)H dehydrogenase complex (plastoquinone); GO:0051537,2 iron, 2 sulfur cluster binding; GO:0009055,electron transfer activity; GO:0046872,metal ion binding; GO:0022900,electron transport chain; GO:0140647,P450-containing electron transport chain; GO:0009773,photosynthetic electron transport in photosystem I; GO:0003674,molecular_function; GO:0005488,binding; GO:0051536,iron-sulfur cluster binding; GO:0051540,metal cluster binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006091,generation of precursor metabolites and energy; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0044237,cellular metabolic process; GO:0009767,photosynthetic electron transport chain; GO:0015979,photosynthesis; GO:0019684,photosynthesis, light reaction; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:1902494,catalytic complex","PF00111.30:2Fe-2S iron-sulfur cluster binding domain","--","--","--"]
["MS01G08960",5.5037,4.5613,4.568,2.715,3.5049,3.0766,3.0573,3.91,3.2313,2.1815,3.1591,1.7969,2.1041,1.0703,2.2281,230,190,187,83,128,108,97,116,122,74,113,76,69,35,73,-0.858938842,0.000908715,0.002595036,false,-1.144773831,0.000122098,0.000340194,"down",-0.436040662,0.054953942,0.086811998,false,-0.240266668,0.27983835,0.357258332,false,0.630836304,0.029388167,0.07473508,false,0.922077641,0.004644745,0.023128991,false,0.193832567,0.443224653,0.826983066,false,0.437355753,0.146183447,0.30072538,false,0.734399792,0.030001147,0.15311578,false,"chr_001",8323233,8327665,"+","MS01G08960","--","--","--","hypothetical protein DVH24_012192 [Malus domestica]","TIF8_ARATH RecName: Full=Protein TIFY 8 {ECO:0000303|PubMed:17499004};","A0A498HLX8_MALDO RecName: Full=Tify domain-containing protein {ECO:0000259|PROSITE:PS51320};","--","GO:0005634,nucleus; GO:0031347,regulation of defense response; GO:2000022,regulation of jasmonic acid mediated signaling pathway; GO:0009611,response to wounding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009753,response to jasmonic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009867,jasmonic acid mediated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0070542,response to fatty acid; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071395,cellular response to jasmonic acid stimulus; GO:0071396,cellular response to lipid; GO:0071398,cellular response to fatty acid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF06200.17:tify domain","Tify","TF","Tify"]
["MS01G08980",0,0,0.0348,1.7261,2.265,2.5596,3.1466,2.5959,1.5865,0.4204,2.2328,1.2476,2.131,0.7414,1.5235,0,0,1,37,58,63,70,54,42,10,56,37,49,17,35,6.884263135,"4.19451E-07","2.31599E-06","up",7.192632871,"2.85495E-08","1.37834E-07","up",7.683623147,"5.69666E-10","3.54684E-09","up",7.921252389,"2.77171E-10","1.64325E-09","up",1.043120919,0.060655754,0.133647792,false,0.742533205,0.107538599,0.248968096,false,0.228807945,0.53859302,0.870105667,false,0.808717777,0.131804525,0.28009695,false,0.518493832,0.232640089,0.518431042,false,"chr_001",8357080,8358715,"+","MS01G08980","--","K04124 gibberellin 3beta-dioxygenase [EC:1.14.11.15] | (RefSeq) gibberellin 3-beta-dioxygenase 1-like (A)","ko00904: Diterpenoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","hypothetical protein DVH24_012190 [Malus domestica]","G3OX_PEA RecName: Full=Gibberellin 3-beta-dioxygenase 1; EC=1.14.11.15; AltName: Full=GA 3-oxidase 1; AltName: Full=Gibberellin 3 beta-hydroxylase 1;","A0A498HM19_MALDO RecName: Full=Fe2OG dioxygenase domain-containing protein {ECO:0000259|PROSITE:PS51471};","Iron/ascorbate family oxidoreductases","GO:0016707,gibberellin 3-beta-dioxygenase activity; GO:0046872,metal ion binding; GO:0009686,gibberellin biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016706,2-oxoglutarate-dependent dioxygenase activity; GO:0051213,dioxygenase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009685,gibberellin metabolic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0016101,diterpenoid metabolic process; GO:0016102,diterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process","PF03171.23:2OG-Fe(II) oxygenase superfamily","--","--","--"]
["MS01G08990",1.1614,0.9533,0.485,2.165,5.4973,2.3254,3.9636,15.4675,4.4994,1.8211,1.4186,1.3041,6.5258,1.3493,1.0774,22,18,9,30,91,37,57,208,77,28,23,25,97,20,16,0.986713736,0.046441184,0.082857985,false,2.08749052,0.002907421,0.006237398,"up",2.170993851,"9.69555E-05",0.000275381,"up",3.49196264,"2.15445E-09","1.14701E-08","up",2.51665991,"6.31139E-06","4.91451E-05","up",1.421250603,0.158284162,0.324627408,false,1.315797545,0.029624411,0.327179532,false,1.205282712,0.017120078,0.061338842,false,0.115646539,0.869210909,0.952102982,false,"chr_001",8361598,8369848,"-","MS01G08990","--","--","--","uncharacterized protein LOC126604390 [Malus sylvestris]","--","A0A498HSG9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72505.1};","Uncharacterized conserved protein","--","PF00458.23:WHEP-TRS domain","--","--","--"]
["MS01G09070",10.825,7.5678,10.6506,14.4628,22.0278,14.2866,21.6136,21.0439,17.2409,7.7242,7.6682,6.2917,15.418,5.6337,8.5592,221,154,213,216,393,245,335,305,318,128,134,130,247,90,137,-0.235027562,0.307572579,0.404984952,false,0.330100251,0.355747731,0.4363309,false,1.032396731,0.000212462,0.000566402,"up",1.332428778,"2.42305E-09","1.28358E-08","up",1.578849603,"1.62178E-13","4.48571E-12","up",1.018330074,0.003551813,0.018675532,"up",0.294274154,0.276978136,0.725219224,false,1.284893066,"3.92431E-06","5.49869E-05","up",0.731168075,0.060442519,0.238449438,false,"chr_001",8495330,8496540,"-","MS01G09070","--","--","--","LOW QUALITY PROTEIN: putative receptor-like protein kinase At4g00960 [Malus domestica]","CRK29_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 29; Short=Cysteine-rich RLK29; EC=2.7.11.-; Flags: Precursor;","A0A498HLW7_MALDO RecName: Full=Gnk2-homologous domain-containing protein {ECO:0000259|PROSITE:PS51473};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005773,vacuole; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0009737,response to abscisic acid; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01657.20:Salt stress response/antifungal","--","--","--"]
["MS01G09080",23.2616,11.9457,8.2796,29.8166,37.2026,10.8059,25.0028,44.0937,37.2843,4.337,3.387,2.5576,9.1482,4.9398,5.3265,674,345,235,632,942,263,550,907,976,102,84,75,208,112,121,-1.897136198,"2.01275E-06","9.9042E-06","down",-0.873806013,0.026361763,0.045214993,false,1.069431558,0.030950925,0.052241415,false,1.564180562,"2.77732E-05","8.43201E-05","up",3.478995309,"5.95918E-32","8.25739E-30","up",2.45491755,"1.01352E-15","1.03495E-13","up",0.491883319,0.259079836,0.712708358,false,2.985700513,"3.41591E-11","1.51512E-09","up",1.971361919,"1.14575E-05",0.000374063,"up","chr_001",8502721,8504071,"-","MS01G09080","--","--","--","uncharacterized protein LOC103456155 [Malus domestica]","CV_ARATH RecName: Full=Protein CHLOROPLAST VESICULATION {ECO:0000303|PubMed:25538186}; Flags: Precursor;","A0A540KAH5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD71234.1};","--","GO:0009941,chloroplast envelope; GO:0031969,chloroplast membrane; GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0097708,intracellular vesicle; GO:0005773,vacuole; GO:1904821,chloroplast disassembly; GO:0010150,leaf senescence; GO:0009735,response to cytokinin; GO:0006979,response to oxidative stress; GO:1902074,response to salt; GO:0009414,response to water deprivation; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009658,chloroplast organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022411,cellular component disassembly; GO:0071840,cellular component organization or biogenesis; GO:1903008,organelle disassembly; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0090693,plant organ senescence; GO:0099402,plant organ development; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0006950,response to stress; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009536,plastid; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0042170,plastid membrane; GO:0009534,chloroplast thylakoid; GO:0009579,thylakoid; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane; GO:0031224,intrinsic component of membrane; GO:0031982,vesicle","--","--","--","--"]
["MS01G09100",0.0564,0.1019,0.0115,0.2159,0.4648,0.1209,0.7579,0.3814,0.1873,0.3058,0.1714,0.2118,0.3019,0.0433,0.072,5,9,1,14,36,9,51,24,15,22,13,19,21,3,5,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",3.250938757,"2.63505E-05","8.03287E-05","up",1.056277664,0.081348283,0.168326001,false,1.670376595,0.032355946,0.104625623,false,0.766280725,0.266929824,0.718556955,false,0.289448237,0.654605518,0.797009944,false,0.90936287,0.28310077300000003,0.574874924,false,"chr_001",8509747,8515832,"-","MS01G09100","--","K08711 ATP-binding cassette, subfamily G (WHITE), member 2, PDR | (RefSeq) pleiotropic drug resistance protein 1-like isoform X1 (A)","ko02010: ABC transporters","pleiotropic drug resistance protein 1-like isoform X2 [Malus sylvestris]","PDR1_PETHY RecName: Full=Pleiotropic drug resistance protein 1 {ECO:0000303|PubMed:22398443}; AltName: Full=ABC transporter G family PDR1 {ECO:0000305}; AltName: Full=Strigolactone transporter {ECO:0000305};","A0A6P5R682_PRUAV SubName: Full=ABC transporter G family member 39-like isoform X3 {ECO:0000313|RefSeq:XP_021800490.1};","Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0140359,ABC-type transporter activity; GO:0005524,ATP binding; GO:0009914,hormone transport; GO:2000032,regulation of secondary shoot formation; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015399,primary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0140657,ATP-dependent activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006810,transport; GO:0008150,biological_process; GO:0010817,regulation of hormone levels; GO:0051179,localization; GO:0051234,establishment of localization; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0001763,morphogenesis of a branching structure; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0010016,shoot system morphogenesis; GO:0010223,secondary shoot formation; GO:0010346,shoot axis formation; GO:0022603,regulation of anatomical structure morphogenesis; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048646,anatomical structure formation involved in morphogenesis; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0060688,regulation of morphogenesis of a branching structure; GO:1905393,plant organ formation; GO:1905428,regulation of plant organ formation; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF01061.27:ABC-2 type transporter","--","--","--"]
["MS01G09200",0.6987,0.8178,1.0937,1.7829,1.1727,0.6932,1.2271,1.4763,1.4179,1.1477,0.8979,0.8285,0.8014,0.5655,0.4159,30,35,46,56,44,25,40,45,55,40,33,36,27,19,14,0.329160425,0.364340676,0.463938955,false,-0.249258293,0.558705833,0.634735728,false,0.706619083,0.115407764,0.166329687,false,0.944973002,0.004335688,0.00891535,false,0.630095467,0.05814897,0.129166377,false,1.21087967,0.001896225,0.011234045,"up",0.238795683,0.567420606,0.880293666,false,0.392179745,0.387279141,0.577642548,false,0.982140999,0.04823314,0.20666659,false,"chr_001",8626511,8629750,"-","MS01G09200","--","K11251 histone H2A | (RefSeq) probable histone H2A variant 3 (A)","ko03082: ATP-dependent chromatin remodeling","probable histone H2A variant 3 [Malus sylvestris]","H2AV3_ARATH RecName: Full=Probable histone H2A variant 3; AltName: Full=H2A.F/Z 3; AltName: Full=HTA9;","A0A498HTM2_MALDO RecName: Full=Histone H2A {ECO:0000256|RuleBase:RU003767};","Histone 2A","GO:0000786,nucleosome; GO:0005634,nucleus; GO:0000325,plant-type vacuole; GO:0003677,DNA binding; GO:0046982,protein heterodimerization activity; GO:0030527,structural constituent of chromatin; GO:0044030,regulation of DNA methylation; GO:0010468,regulation of gene expression; GO:0009266,response to temperature stimulus; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0046983,protein dimerization activity; GO:0005198,structural molecule activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006304,DNA modification; GO:0006305,DNA alkylation; GO:0006306,DNA methylation; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0032259,methylation; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043414,macromolecule methylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044728,DNA methylation or demethylation; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051052,regulation of DNA metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0010467,gene expression; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0000785,chromatin; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005694,chromosome; GO:0032991,protein-containing complex; GO:0032993,protein-DNA complex; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0044815,DNA packaging complex; GO:0110165,cellular anatomical entity; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005737,cytoplasm; GO:0005773,vacuole","PF00125.27:Core histone H2A/H2B/H3/H4","--","--","--"]
["MS01G09210",0.6681,0.8379,0.5116,12.6345,3.0583,3.0491,4.9871,4.3921,11.8328,0.1372,0.5204,0.3851,0.3548,2.3481,0.7812,12,15,9,166,48,46,68,56,192,2,8,7,5,33,11,"NA","NA","NA","NA","NA","NA","NA","NA",3.428989769,"5.98692E-08","2.80917E-07","up",3.657979078,"2.09343E-14","1.86849E-13","up",4.438794121,"2.41E-14","7.27507E-13","up",2.605133609,"1.57767E-05",0.000201192,"up",0.233562166,0.697293363,0.922852841,false,4.215556474,"5.44126E-09","1.5555E-07","up",2.381595396,0.00105392,0.013997438,"up","chr_001",8629902,8633203,"-","MS01G09210","--","--","--","EG45-like domain containing protein isoform X1 [Malus sylvestris]","EGC_CITJA RecName: Full=EG45-like domain containing protein; AltName: Full=Blight-associated protein p12; AltName: Full=Plant natriuretic peptide; Short=PNP; Flags: Precursor;","A0A498HP21_MALDO RecName: Full=Expansin-like EG45 domain-containing protein {ECO:0000259|PROSITE:PS50842};","--","GO:0048046,apoplast; GO:0009627,systemic acquired resistance; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF03330.21:Lytic transglycolase","--","--","--"]
["MS01G09220",2.8621,2.9335,4.1063,0.8459,1.1684,1.1051,1.0189,1.2857,1.3528,1.0483,1.1929,0.535,0.4337,0.7513,0.9669,185,189,260,40,66,60,50,59,79,55,66,35,22,38,49,-1.652118983,"4.43149E-07","2.43501E-06","down",-1.910106416,"6.04824E-10","3.6083E-09","down",-1.442348435,"7.11398E-08","3.29904E-07","down",-1.150485057,"4.54187E-06","1.55508E-05","down",0.51088215,0.171785515,0.298562144,false,0.775046527,0.030592058,0.100328752,false,0.289473797,0.333476816,0.768219982,false,0.221111074,0.576411885,0.741305695,false,0.492548674,0.194903933,0.471059232,false,"chr_001",8643762,8648847,"+","MS01G09220","--","K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] | (RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic (A)","ko00730: Thiamine metabolism; ko00900: Terpenoid backbone biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Malus domestica]","DXS_CAPAN RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic; Short=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; EC=2.2.1.7; AltName: Full=CapTKT2; Flags: Precursor;","A0A498HLU6_MALDO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|ARBA:ARBA00013150}; EC=2.2.1.7 {ECO:0000256|ARBA:ARBA00013150};","Transketolase","GO:0009507,chloroplast; GO:0008661,1-deoxy-D-xylulose-5-phosphate synthase activity; GO:0046872,metal ion binding; GO:0052865,1-deoxy-D-xylulose 5-phosphate biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0009228,thiamine biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016744,transketolase or transaldolase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0019637,organophosphate metabolic process; GO:0044237,cellular metabolic process; GO:0052863,1-deoxy-D-xylulose 5-phosphate metabolic process; GO:0071704,organic substance metabolic process; GO:0090407,organophosphate biosynthetic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0006066,alcohol metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006766,vitamin metabolic process; GO:0006767,water-soluble vitamin metabolic process; GO:0006772,thiamine metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009110,vitamin biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0034308,primary alcohol metabolic process; GO:0034309,primary alcohol biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042364,water-soluble vitamin biosynthetic process; GO:0042723,thiamine-containing compound metabolic process; GO:0042724,thiamine-containing compound biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044272,sulfur compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046165,alcohol biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0072527,pyrimidine-containing compound metabolic process; GO:0072528,pyrimidine-containing compound biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13292.9:1-deoxy-D-xylulose-5-phosphate synthase","--","--","--"]
["MS01G09300",87.1974,99.398,72.4761,8.997,7.576,19.5654,7.0277,8.0092,4.6986,131.5593,286.8707,144.2623,21.8371,64.3017,39.4904,2239,2544,1823,169,170,422,137,146,109,2742,6305,3749,440,1292,795,1.288988577,"7.0199E-06","3.13788E-05","up",-0.761950418,0.018168549,0.032458987,false,-2.65043072,"1.28567E-15","1.46837E-14","down",-3.430411012,"5.46644E-42","2.46778E-40","down",-4.708144605,"9.29244E-45","2.90067E-42","down",-2.653232603,"7.61367E-13","5.05259E-11","down",-0.776739513,0.043313247,0.380813064,false,-3.928567892,"4.92599E-24","1.42688E-21","down",-1.866319919,"9.20625E-06",0.000313101,"down","chr_001",8737741,8741630,"+","MS01G09300","--","--","--","uncharacterized protein LOC103456171 [Malus domestica]","--","A0A498HNK7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72469.1};","--","--","PF04862.15:Protein of unknown function (DUF642)","--","--","--"]
["MS01G09350",3.1655,2.9067,2.9576,0.4401,1.6577,0.6387,0.4947,0.7558,1.5441,1.2559,1.5044,0.6892,0.6837,1.6456,1.4371,59,54,54,6,27,10,7,10,26,19,24,13,10,24,21,-1.217639983,0.001942247,0.005119556,"down",-0.974308383,0.013878021,0.025523979,false,-1.476709554,0.005087657,0.01035328,"down",-1.400189541,0.00213608,0.004677834,"down",-0.186960148,0.760842815,0.84854735,false,-0.416205273,0.491976165,0.675957321,false,0.059725224,0.934913804,0.984328583,false,-0.252618723,0.711073322,0.83572386,false,-0.4740972,0.476438278,0.740657106,false,"chr_001",8799121,8801146,"+","MS01G09350","--","K02265 cytochrome c oxidase subunit 5b | (RefSeq) cytochrome c oxidase subunit 5b-2, mitochondrial-like (A)","ko00190: Oxidative phosphorylation; ko01100: Metabolic pathways","cytochrome c oxidase subunit 5b-2, mitochondrial-like [Malus domestica]","CX5B2_ARATH RecName: Full=Cytochrome c oxidase subunit 5b-2, mitochondrial; Short=AtCOX5b-2; Flags: Precursor;","A0A540LCY7_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD84346.1};","Cytochrome c oxidase, subunit Vb/COX4","GO:0005751,mitochondrial respiratory chain complex IV; GO:0005739,mitochondrion; GO:0046872,metal ion binding; GO:0006123,mitochondrial electron transport, cytochrome c to oxygen; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006091,generation of precursor metabolites and energy; GO:0006119,oxidative phosphorylation; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009060,aerobic respiration; GO:0009987,cellular process; GO:0015980,energy derivation by oxidation of organic compounds; GO:0019646,aerobic electron transport chain; GO:0022900,electron transport chain; GO:0022904,respiratory electron transport chain; GO:0042773,ATP synthesis coupled electron transport; GO:0042775,mitochondrial ATP synthesis coupled electron transport; GO:0044237,cellular metabolic process; GO:0045333,cellular respiration; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005740,mitochondrial envelope; GO:0005743,mitochondrial inner membrane; GO:0005746,mitochondrial respirasome; GO:0016020,membrane; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031966,mitochondrial membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0045277,respiratory chain complex IV; GO:0070069,cytochrome complex; GO:0070469,respirasome; GO:0098796,membrane protein complex; GO:0098798,mitochondrial protein-containing complex; GO:0098800,inner mitochondrial membrane protein complex; GO:0098803,respiratory chain complex; GO:0110165,cellular anatomical entity; GO:1902494,catalytic complex","PF01215.22:Cytochrome c oxidase subunit Vb","--","--","--"]
["MS01G09390",1.4762,1.4332,0.6157,0.0868,0.0545,0.0567,0.0627,0.0894,0.0351,0.3715,0.612,0.2353,0.2832,0.1217,0.081,93,90,38,4,3,3,3,4,2,19,33,15,14,6,4,-1.366898829,0.005635262,0.013239595,"down",-2.567448386,"6.466E-06","2.23742E-05","down",-3.963558529,"1.50555E-09","8.86249E-09","down",-3.993225563,"3.05047E-09","1.59241E-08","down",-2.609722808,0.000658805,0.003019852,"down","NA","NA","NA","NA","NA","NA","NA","NA",-2.582415434,0.000515427,0.003607357,"down","NA","NA","NA","NA","chr_001",8819897,8824271,"-","MS01G09390","--","K21776 protein lin-54 | (RefSeq) CRC domain-containing protein TSO1-like (A)","--","CRC domain-containing protein TSO1-like [Malus domestica]","TSO1_ARATH RecName: Full=CRC domain-containing protein TSO1;","A0A540LD50_MALBA RecName: Full=CRC domain-containing protein {ECO:0000259|PROSITE:PS51634};","Metallothionein-like protein","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0000976,transcription cis-regulatory region binding; GO:0010481,epidermal cell division; GO:0048444,floral organ morphogenesis; GO:0010235,guard mother cell cytokinesis; GO:0051302,regulation of cell division; GO:0009934,regulation of meristem structural organization; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0051301,cell division; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048437,floral organ development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0090696,post-embryonic plant organ development; GO:0090697,post-embryonic plant organ morphogenesis; GO:0090698,post-embryonic plant morphogenesis; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0000910,cytokinesis; GO:0000911,cytokinesis by cell plate formation; GO:0007049,cell cycle; GO:0009888,tissue development; GO:0010374,stomatal complex development; GO:0010440,stomatal lineage progression; GO:0022402,cell cycle process; GO:0048869,cellular developmental process; GO:0090558,plant epidermis development; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0009933,meristem structural organization; GO:0048507,meristem development; GO:0048532,anatomical structure arrangement; GO:0050793,regulation of developmental process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03638.18:Tesmin/TSO1-like CXC domain, cysteine-rich domain","CPP","TF","CPP"]
["MS01G09400",6.3507,4.8422,3.8898,0.6945,1.9379,3.8306,1.673,1.4313,1.1247,5.6332,7.1227,9.7052,3.2372,5.7352,5.0761,75,57,45,6,20,38,15,12,12,54,72,116,30,53,47,0.757643596,0.020962237,0.041781672,false,0.181681843,0.604520962,0.675560352,false,-1.020595996,0.065169236,0.100837966,false,-1.562070248,0.000305196,0.000776763,"down",-2.306701292,"1.48693E-08","1.98206E-07","down",-1.729264668,"8.36441E-05",0.000831125,"down","NA","NA","NA","NA",-1.755554236,0.00091362,0.005804594,"down",-1.176303705,0.033964354,0.165597883,false,"chr_001",8840806,8841553,"+","MS01G09400","--","--","--","transcription initiation factor TFIID subunit 15-like [Malus domestica]","--","A0A498HLS3_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72458.1};","RNA-binding Ran Zn-finger protein and related proteins","GO:0046872,metal ion binding; GO:0003729,mRNA binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding","PF00641.21:Zn-finger in Ran binding protein and others","--","--","--"]
["MS01G09660",2.4142,2.8534,2.7853,12.7938,9.8205,9.7838,13.6999,14.6741,17.1681,3.728,4.3274,3.2677,8.3869,6.2761,6.8757,146,172,165,566,519,497,629,630,938,183,224,200,398,297,326,0.675756527,0.000502772,0.001533273,false,1.715231397,"9.70622E-19","1.33906E-17","up",2.224462903,"1.50266E-28","4.7514E-27","up",2.780910607,"1.45607E-65","1.69875E-63","up",2.118024067,"4.86945E-33","7.39688E-31","up",1.082192761,"3.22955E-09","1.032E-07","up",0.555777401,0.0032133,0.111111661,false,1.564406357,"1.53436E-13","1.00128E-11","up",0.534820998,0.011235183,0.078088463,false,"chr_001",9224123,9227297,"+","MS01G09660","--","K16241 transcription factor HY5 | (RefSeq) HY5; transcription factor HY5 (A)","ko04712: Circadian rhythm - plant","transcription factor HY5-like [Malus sylvestris]","HY5_SOLLC RecName: Full=Transcription factor HY5; AltName: Full=LeHY5; AltName: Full=tHY5;","A0A498HU83_MALDO RecName: Full=BZIP domain-containing protein {ECO:0000259|PROSITE:PS50217};","Transcriptional activator FOSB/c-Fos and related bZIP transcription factors","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0045944,positive regulation of transcription by RNA polymerase II; GO:0010017,red or far-red light signaling pathway; GO:0009585,red, far-red light phototransduction; GO:0010099,regulation of photomorphogenesis; GO:0010218,response to far red light; GO:0010114,response to red light; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003700,DNA-binding transcription factor activity; GO:0140110,transcription regulator activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045893,positive regulation of DNA-templated transcription; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009639,response to red or far red light; GO:0023052,signaling; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071478,cellular response to radiation; GO:0071482,cellular response to light stimulus; GO:0071489,cellular response to red or far red light; GO:0104004,cellular response to environmental stimulus; GO:0007602,phototransduction; GO:0009581,detection of external stimulus; GO:0009582,detection of abiotic stimulus; GO:0009583,detection of light stimulus; GO:0009605,response to external stimulus; GO:0051606,detection of stimulus; GO:0007275,multicellular organism development; GO:0009640,photomorphogenesis; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048580,regulation of post-embryonic development; GO:0048583,regulation of response to stimulus; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:2000026,regulation of multicellular organismal development; GO:2000030,regulation of response to red or far red light; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00170.24:bZIP transcription factor","bZIP","TF","bZIP"]
["MS01G09670",56.5616,55.3126,63.6649,15.9741,13.5007,16.2281,14.9922,18.8211,14.8268,26.4931,30.1954,28.8825,22.8896,24.2618,22.508,5029,4902,5545,1039,1049,1212,1012,1188,1191,1912,2298,2599,1597,1688,1569,-0.850192214,"5.54795E-16","9.17446E-15",false,-1.039641937,"4.73409E-21","7.62021E-20","down",-1.728374333,"5.89086E-42","3.84792E-40","down",-1.563541316,"1.1597E-21","1.76381E-20","down",-0.701443937,"1.70064E-05",0.000119487,false,-0.509704749,0.001793891,0.010724805,false,0.163167274,0.356867786,0.782894675,false,-0.86156685,"3.35023E-12","1.78509E-10",false,-0.663722524,"1.48496E-07","9.57211E-06",false,"chr_001",9229638,9236359,"+","MS01G09670","--","K10999 cellulose synthase A [EC:2.4.1.12] | (RefSeq) LOW QUALITY PROTEIN: cellulose synthase A catalytic subunit 1 [UDP-forming] (A)","--","cellulose synthase A catalytic subunit 1 [UDP-forming]","CESA1_ARATH RecName: Full=Cellulose synthase A catalytic subunit 1 [UDP-forming]; Short=AtCesA1; EC=2.4.1.12; AltName: Full=Protein RADIALLY SWOLLEN 1; Short=AtRSW1;","A0A498HR76_MALDO RecName: Full=Cellulose synthase {ECO:0000256|RuleBase:RU361116}; EC=2.4.1.12 {ECO:0000256|RuleBase:RU361116};","--","GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005802,trans-Golgi network; GO:0016760,cellulose synthase (UDP-forming) activity; GO:0016759,cellulose synthase activity; GO:0046872,metal ion binding; GO:0071555,cell wall organization; GO:0030244,cellulose biosynthetic process; GO:0042538,hyperosmotic salinity response; GO:0009833,plant-type primary cell wall biogenesis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0016051,carbohydrate biosynthetic process; GO:0030243,cellulose metabolic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0006972,hyperosmotic response; GO:0009628,response to abiotic stimulus; GO:0009651,response to salt stress; GO:0050896,response to stimulus; GO:0000278,mitotic cell cycle; GO:0000281,mitotic cytokinesis; GO:0000910,cytokinesis; GO:0007049,cell cycle; GO:0009832,plant-type cell wall biogenesis; GO:0022402,cell cycle process; GO:0042546,cell wall biogenesis; GO:0044085,cellular component biogenesis; GO:0051301,cell division; GO:0061640,cytoskeleton-dependent cytokinesis; GO:0071669,plant-type cell wall organization or biogenesis; GO:1903047,mitotic cell cycle process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery; GO:0031984,organelle subcompartment; GO:0098791,Golgi apparatus subcompartment","PF03552.17:Cellulose synthase","--","--","--"]
["MS01G09700",2.1695,3.4939,1.457,4.9167,9.6035,3.5343,8.8735,11.6608,9.7948,7.1742,6.8033,14.159,8.4396,6.9311,5.6799,38,61,25,63,147,52,118,145,155,102,102,251,116,95,78,2.164602358,"2.37981E-07","1.36396E-06","up",1.854411963,"2.88604E-07","1.21105E-06","up",1.573498697,0.001623399,0.003651881,"up",2.368736802,"6.23505E-12","4.36762E-11","up",0.218503354,0.511443205,0.654652834,false,0.530084546,0.037917932,0.117670965,false,0.789307083,0.053099876,0.413957719,false,-0.566241385,0.222087666,0.399339265,false,-0.25033218,0.549984835,0.79004431,false,"chr_001",9251221,9252346,"+","MS01G09700","--","--","--","EG45-like domain containing protein 2 [Malus domestica]","EGC_CITJA RecName: Full=EG45-like domain containing protein; AltName: Full=Blight-associated protein p12; AltName: Full=Plant natriuretic peptide; Short=PNP; Flags: Precursor;","A0A5N5GYZ4_9ROSA SubName: Full=EG45-like domain containing protein {ECO:0000313|EMBL:KAB2619111.1};","--","GO:0048046,apoplast; GO:0009627,systemic acquired resistance; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF03330.21:Lytic transglycolase","--","--","--"]
["MS01G09710",32.7139,28.7596,32.0832,8.4621,10.9253,8.9569,7.558,9.2229,7.3,16.4262,18.5534,15.1032,12.2884,13.692,15.4271,1374,1204,1320,260,401,316,241,275,277,560,667,642,405,450,508,-0.716482393,"2.18789E-07","1.2613E-06",false,-0.885018118,"3.58903E-10","2.19708E-09",false,-1.502257908,"7.19666E-17","9.16851E-16","down",-1.673720316,"2.16914E-22","3.45091E-21","down",-0.945386847,"3.86254E-07","3.91995E-06",false,-0.773811916,"3.26586E-05",0.000375472,false,-0.173845113,0.439663852,0.82512025,false,-0.76888744,0.000109219,0.000985507,false,-0.590896978,0.002986859,0.030176204,false,"chr_001",9274712,9276507,"-","MS01G09710","--","K26222 UDP-galactose transporter | (RefSeq) UDP-galactose transporter 1 (A)","--","probable sugar phosphate/phosphate translocator At5g25400 [Malus sylvestris]","PT525_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At5g25400;","A0A5N5GU22_9ROSA SubName: Full=Sugar phosphate/phosphate translocator {ECO:0000313|EMBL:KAB2619109.1};","Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter","GO:0005794,Golgi apparatus; GO:0016021,integral component of membrane; GO:0015297,antiporter activity; GO:0008643,carbohydrate transport; GO:0015780,nucleotide-sugar transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015291,secondary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0006810,transport; GO:0008150,biological_process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0009987,cellular process; GO:0015931,nucleobase-containing compound transport; GO:0055085,transmembrane transport; GO:0071705,nitrogen compound transport; GO:1901264,carbohydrate derivative transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane","PF03151.19:Triose-phosphate Transporter family","--","--","--"]
["MS01G09840",0.559,0.8412,2.8531,9.1692,4.4774,9.9818,4.0495,7.8737,5.5684,1.3773,4.2448,6.6277,1.7808,2.5002,1.7824,2,3,10,24,14,30,11,20,18,4,13,24,5,7,5,"NA","NA","NA","NA","NA","NA","NA","NA",2.687912576,0.000195207,0.000524627,"up","NA","NA","NA","NA",0.619785229,0.344502025,0.496949244,false,"NA","NA","NA","NA",-0.351861197,0.497370512,0.854134967,false,0.974657532,0.128267427,0.27490581,false,1.893556387,0.001996911,0.022500157,"up","chr_001",9427179,9427422,"-","MS01G09840","--","K11805 DDB1- and CUL4-associated factor 7 | (RefSeq) WD repeat-containing protein LWD1 (A)","ko03083: Polycomb repressive complex","uncharacterized protein LOC103427443 [Malus domestica]","LWD1_ARATH RecName: Full=WD repeat-containing protein LWD1; AltName: Full=Protein ANTHOCYANIN 11-A; Short=AtAN11-A; AltName: Full=Protein LIGHT-REGULATED WD1; AltName: Full=WD repeat-containing protein AN11-A;","A0A835THM3_9ROSI SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAF9688036.1};","Conserved WD40 repeat-containing protein AN11","GO:0005634,nucleus; GO:0000976,transcription cis-regulatory region binding; GO:0009718,anthocyanin-containing compound biosynthetic process; GO:0043153,entrainment of circadian clock by photoperiod; GO:0048573,photoperiodism, flowering; GO:0048511,rhythmic process; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0009813,flavonoid biosynthetic process; GO:0042440,pigment metabolic process; GO:0046148,pigment biosynthetic process; GO:0046283,anthocyanin-containing compound metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0007623,circadian rhythm; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009605,response to external stimulus; GO:0009628,response to abiotic stimulus; GO:0009648,photoperiodism; GO:0009649,entrainment of circadian clock; GO:0042752,regulation of circadian rhythm; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0065007,biological regulation; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G09880",19.5885,11.6152,7.6109,3.6748,2.666,2.7096,4.4852,4.8217,8.2919,2.5833,2.6801,1.7708,1.8956,2.8171,2.3088,1093,646,416,150,130,127,190,191,418,117,128,100,83,123,101,-2.285556424,"1.19571E-10","1.10213E-09","down",-2.185860946,"9.74924E-11","6.32469E-10","down",-1.893551126,"1.45521E-07","6.48875E-07","down",-0.87819558,0.015526129,0.028297637,false,1.425004382,"2.57666E-06","2.20792E-05","up",1.327001651,"3.84491E-06","5.88496E-05","up",1.020025127,0.000532192,0.041864338,"up",0.408519081,0.145360485,0.2995969,false,0.314028226,0.227122934,0.511633372,false,"chr_001",9463369,9466761,"+","MS01G09880","--","--","--","hypothetical protein DVH24_012100 [Malus domestica]","--","A0A498HLR3_MALDO RecName: Full=C2 NT-type domain-containing protein {ECO:0000259|PROSITE:PS51840};","--","--","PF10358.12:N-terminal C2 in EEIG1 and EHBP1 proteins","--","--","--"]
["MS01G09890",9.4049,8.7616,7.4117,3.4966,3.0749,7.0132,2.076,2.4749,5.634,1.7826,5.2825,3.1912,3.4573,4.5236,2.6364,364,338,281,99,104,228,61,68,197,56,175,125,105,137,80,-1.150813297,0.000656023,0.001942304,"down",-0.978593916,"5.67206E-05",0.000167771,false,-0.717378292,0.023849246,0.041469565,false,-1.061475474,0.002341659,0.005080168,"down",0.100923797,0.829655178,0.89469591,false,-0.064196497,0.871033251,0.930768165,false,-0.340495362,0.439115141,0.824671739,false,0.445172688,0.306216853,0.496491764,false,0.284956441,0.424776107,0.702914908,false,"chr_001",9467263,9469383,"-","MS01G09890","--","--","--","hypothetical protein DVH24_012099 [Malus domestica]","--","A0A498HS06_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72415.1};","--","GO:0005634,nucleus; GO:0003712,transcription coregulator activity; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G09920",0.9901,1.5571,1.12,0.2195,0.3981,0.5416,0.1762,0.3015,0.2962,1.2527,1.1255,0.5024,0.2728,0.5471,0.273,37,58,41,6,13,17,5,8,10,38,36,19,8,16,8,-0.167026474,0.706767216,0.779665447,false,-1.456734816,0.002220148,0.004872678,"down",-1.440970192,0.002706891,0.005826105,"down",-1.963229156,"9.49725E-05",0.000263762,"down",-1.786792184,0.002748002,0.010344519,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.266114139,0.029747505,0.093567028,false,"NA","NA","NA","NA","chr_001",9526215,9527812,"+","MS01G09920","--","--","--","UPF0481 protein At3g47200-like [Malus sylvestris]","Y3720_ARATH RecName: Full=UPF0481 protein At3g47200;","A0A498HU48_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72413.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF03140.18:Plant protein of unknown function","--","--","--"]
["MS01G09930",30.8582,39.21,33.6332,10.6499,12.0768,12.2582,9.9023,11.4494,10.277,11.8939,10.0779,9.6502,9.4166,10.6132,11.3099,1921,2433,2051,485,657,641,468,506,578,601,537,608,460,517,552,-1.523116421,"1.74068E-18","3.61481E-17","down",-1.435445614,"1.08923E-21","1.83111E-20","down",-1.352504087,"6.75366E-17","8.63738E-16","down",-1.429469822,"3.30475E-18","3.95958E-17","down",0.107129643,0.549763848,0.686775666,false,0.021065363,0.892436394,0.942219199,false,-0.079473258,0.632049512,0.902516255,false,0.188681043,0.294557038,0.483552547,false,0.109023287,0.484890892,0.747217754,false,"chr_001",9532022,9534771,"-","MS01G09930","--","K20043 clathrin coat assembly protein AP180 | (RefSeq) clathrin coat assembly protein AP180 (A)","--","hypothetical protein DVH24_012096 [Malus domestica]","CAP2_ARATH RecName: Full=Putative clathrin assembly protein At2g25430;","A0A498HR48_MALDO RecName: Full=ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942};","Clathrin assembly protein AP180 and related proteins, contain ENTH domain","GO:0005905,clathrin-coated pit; GO:0030136,clathrin-coated vesicle; GO:0005794,Golgi apparatus; GO:0005773,vacuole; GO:0005545,1-phosphatidylinositol binding; GO:0032050,clathrin heavy chain binding; GO:0005546,phosphatidylinositol-4,5-bisphosphate binding; GO:0000149,SNARE binding; GO:0048268,clathrin coat assembly; GO:0072583,clathrin-dependent endocytosis; GO:0006900,vesicle budding from membrane; GO:0003674,molecular_function; GO:0005488,binding; GO:0005543,phospholipid binding; GO:0008289,lipid binding; GO:0035091,phosphatidylinositol binding; GO:0005515,protein binding; GO:0030276,clathrin binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:1901981,phosphatidylinositol phosphate binding; GO:1902936,phosphatidylinositol bisphosphate binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0006810,transport; GO:0006897,endocytosis; GO:0006898,receptor-mediated endocytosis; GO:0016192,vesicle-mediated transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0006996,organelle organization; GO:0016050,vesicle organization; GO:0061024,membrane organization; GO:0005575,cellular_component; GO:0005886,plasma membrane; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0071944,cell periphery; GO:0098590,plasma membrane region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0030135,coated vesicle; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle","PF07651.19:ANTH domain","--","--","--"]
["MS01G09940",10.4387,10.3929,12.7117,35.0939,36.593,34.7897,33.3619,31.5724,28.7389,33.1951,29.2813,33.7173,29.6102,34.3318,32.9817,394,391,470,969,1207,1103,956,846,980,1017,946,1288,877,1014,976,1.71161949,"3.97434E-28","1.71704E-26","up",1.824240957,"4.79084E-39","2.28237E-37","up",1.885201654,"1.52838E-35","7.2839E-34","up",1.76997744,"1.35789E-27","2.95951E-26","up",0.070749548,0.656004648,0.771581634,false,-0.040551877,0.782837126,0.879234214,false,-0.119099776,0.45100832,0.830826827,false,0.192112341,0.206940329,0.381124333,false,0.086738134,0.536314172,0.783379398,false,"chr_001",9545980,9550078,"+","MS01G09940","--","K15281 solute carrier family 35, member D1/2/3 | (RefSeq) UDP-N-acetylglucosamine transporter UGNT1 (A)","--","UDP-N-acetylglucosamine transporter UGNT1 [Malus domestica]","UGNT1_ARATH RecName: Full=UDP-N-acetylglucosamine transporter UGNT1 {ECO:0000305}; Short=UDP-GlcNAc transporter 1 {ECO:0000303|PubMed:30224661}; AltName: Full=Nucleotide-sugar uncharacterized transporter 3 {ECO:0000305};","A0A498HN86_MALDO RecName: Full=TPT domain-containing protein {ECO:0000259|Pfam:PF03151};","Nucleotide-sugar transporter VRG4/SQV-7","GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0015297,antiporter activity; GO:0005338,nucleotide-sugar transmembrane transporter activity; GO:0005461,UDP-glucuronic acid transmembrane transporter activity; GO:0005463,UDP-N-acetylgalactosamine transmembrane transporter activity; GO:0005462,UDP-N-acetylglucosamine transmembrane transporter activity; GO:0008643,carbohydrate transport; GO:1990569,UDP-N-acetylglucosamine transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015291,secondary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0015932,nucleobase-containing compound transmembrane transporter activity; GO:1901505,carbohydrate derivative transmembrane transporter activity; GO:0015165,pyrimidine nucleotide-sugar transmembrane transporter activity; GO:0008509,anion transmembrane transporter activity; GO:0008514,organic anion transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0006810,transport; GO:0008150,biological_process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0006811,ion transport; GO:0006820,anion transport; GO:0009987,cellular process; GO:0015711,organic anion transport; GO:0015780,nucleotide-sugar transmembrane transport; GO:0015931,nucleobase-containing compound transport; GO:0034220,ion transmembrane transport; GO:0055085,transmembrane transport; GO:0071705,nitrogen compound transport; GO:0090481,pyrimidine nucleotide-sugar transmembrane transport; GO:0098656,anion transmembrane transport; GO:1901264,carbohydrate derivative transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF03151.19:Triose-phosphate Transporter family","--","--","--"]
["MS01G09950",2.7735,3.0317,3.2539,0.4527,0.7579,0.345,0.5998,0.6997,0.504,0.918,1.741,0.6544,0.5275,0.5819,0.528,67,73,77,8,16,7,11,12,11,18,36,16,10,11,10,-1.280485137,0.00124577,0.003441823,"down",-2.174488135,"2.20549E-08","1.07925E-07","down",-2.308516752,"7.95721E-08","3.66724E-07","down",-2.055743088,"1.41153E-07","5.96068E-07","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",9556151,9558347,"+","MS01G09950","--","K13153 U11/U12 small nuclear ribonucleoprotein 25 kDa protein | (RefSeq) U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like isoform X1 (A)","--","uncharacterized protein LOC103400255 [Malus domestica]","U1125_ARATH RecName: Full=U11/U12 small nuclear ribonucleoprotein 25 kDa protein; Short=U11/U12 snRNP 25 kDa protein; Short=U11/U12-25K;","A0A540M7G6_MALBA RecName: Full=Ubiquitin_4 domain-containing protein {ECO:0000259|Pfam:PF18036};","--","GO:0005689,U12-type spliceosomal complex; GO:0000398,mRNA splicing, via spliceosome; GO:0000375,RNA splicing, via transesterification reactions; GO:0000377,RNA splicing, via transesterification reactions with bulged adenosine as nucleophile; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006397,mRNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008380,RNA splicing; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016071,mRNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:1990904,ribonucleoprotein complex","PF18036.4:Ubiquitin-like domain","--","--","--"]
["MS01G09960",155.1938,176.0256,186.7919,43.6728,31.4735,45.8664,33.3706,20.5051,38.1128,68.2443,77.8393,77.7258,56.7678,73.6073,57.1748,4435,5014,5229,913,786,1101,724,416,984,1583,1904,2248,1273,1646,1281,-1.02423997,"1.49663E-18","3.13001E-17","down",-1.172868114,"5.60742E-15","5.59927E-14","down",-1.888373893,"7.19823E-28","2.17672E-26","down",-2.215257106,"1.82631E-23","3.10827E-22","down",-1.177570138,"2.29761E-07","2.46008E-06","down",-1.026292636,"1.75032E-05",0.000220869,"down",-0.327505267,0.197050722,0.654604351,false,-0.847807647,"3.83941E-07","7.11419E-06",false,-0.691192247,0.000294076,0.005149212,false,"chr_001",9558806,9560027,"+","MS01G09960","--","K02109 F-type H+-transporting ATPase subunit b | (RefSeq) ATP synthase subunit b', chloroplastic (A)","ko00190: Oxidative phosphorylation; ko00195: Photosynthesis; ko01100: Metabolic pathways","hypothetical protein DVH24_012092 [Malus domestica]","ATPF2_SPIOL RecName: Full=ATP synthase subunit b', chloroplastic; AltName: Full=ATP synthase F(0) sector subunit b'; AltName: Full=ATPase subunit II; Flags: Precursor;","A0A498HLM2_MALDO RecName: Full=Ubiquitin_4 domain-containing protein {ECO:0000259|Pfam:PF18036};","--","GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0045263,proton-transporting ATP synthase complex, coupling factor F(o); GO:0005524,ATP binding; GO:0015078,proton transmembrane transporter activity; GO:0015986,proton motive force-driven ATP synthesis; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005215,transporter activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006163,purine nucleotide metabolic process; GO:0006164,purine nucleotide biosynthetic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006754,ATP biosynthetic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009117,nucleotide metabolic process; GO:0009141,nucleoside triphosphate metabolic process; GO:0009142,nucleoside triphosphate biosynthetic process; GO:0009144,purine nucleoside triphosphate metabolic process; GO:0009145,purine nucleoside triphosphate biosynthetic process; GO:0009150,purine ribonucleotide metabolic process; GO:0009152,purine ribonucleotide biosynthetic process; GO:0009165,nucleotide biosynthetic process; GO:0009199,ribonucleoside triphosphate metabolic process; GO:0009201,ribonucleoside triphosphate biosynthetic process; GO:0009205,purine ribonucleoside triphosphate metabolic process; GO:0009206,purine ribonucleoside triphosphate biosynthetic process; GO:0009259,ribonucleotide metabolic process; GO:0009260,ribonucleotide biosynthetic process; GO:0009987,cellular process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0019693,ribose phosphate metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0046034,ATP metabolic process; GO:0046390,ribose phosphate biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0072521,purine-containing compound metabolic process; GO:0072522,purine-containing compound biosynthetic process; GO:0090407,organophosphate biosynthetic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901293,nucleoside phosphate biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane; GO:0016469,proton-transporting two-sector ATPase complex; GO:0032991,protein-containing complex; GO:0033177,proton-transporting two-sector ATPase complex, proton-transporting domain; GO:0045259,proton-transporting ATP synthase complex; GO:0098796,membrane protein complex","PF00430.21:ATP synthase B/B' CF(0)","--","--","--"]
["MS01G09970",12.7764,14.7878,20.2494,57.4669,29.3064,36.4359,45.1242,42.7453,57.3023,21.3784,23.8995,19.9845,27.3388,24.3898,22.0965,885,1021,1374,2912,1774,2120,2373,2102,3586,1202,1417,1401,1486,1322,1200,0.639081481,0.000831469,0.00239972,false,0.926122483,"1.92645E-06","7.19998E-06",false,1.583848818,"3.27925E-08","1.60177E-07","up",1.885627807,"1.93552E-21","2.89938E-20","up",1.25918078,"8.79718E-16","3.06241E-14","up",0.975957657,"6.5195E-09","1.93163E-07",false,0.302789908,0.254219708,0.708079219,false,0.959543038,0.000242175,0.001916539,false,0.681503904,0.008971636,0.066902292,false,"chr_001",9562894,9566839,"+","MS01G09970","--","K16279 E3 ubiquitin-protein ligase KEG [EC:2.7.11.1 2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase KEG isoform X1 (A)","--","hypothetical protein DVH24_012091 [Malus domestica]","KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; EC=2.3.2.27; EC=2.7.11.1; AltName: Full=Protein KEEP ON GOING; AltName: Full=RING finger protein KEG; AltName: Full=RING-type E3 ubiquitin transferase KEG {ECO:0000305};","A0A498HSF5_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","MEKK and related serine/threonine protein kinases","GO:0005769,early endosome; GO:0005802,trans-Golgi network; GO:0005524,ATP binding; GO:0046872,metal ion binding; GO:0004672,protein kinase activity; GO:0043621,protein self-association; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004842,ubiquitin-protein transferase activity; GO:0009738,abscisic acid-activated signaling pathway; GO:0006952,defense response; GO:0048589,developmental growth; GO:0016197,endosomal transport; GO:0045324,late endosome to vacuole transport; GO:0009788,negative regulation of abscisic acid-activated signaling pathway; GO:0033184,positive regulation of histone ubiquitination; GO:0006468,protein phosphorylation; GO:0016567,protein ubiquitination; GO:0009737,response to abscisic acid; GO:0032940,secretion by cell; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0005515,protein binding; GO:0019787,ubiquitin-like protein transferase activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006950,response to stress; GO:0032502,developmental process; GO:0040007,growth; GO:0006810,transport; GO:0016192,vesicle-mediated transport; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0007034,vacuolar transport; GO:0009787,regulation of abscisic acid-activated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023057,negative regulation of signaling; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:1901419,regulation of response to alcohol; GO:1901420,negative regulation of response to alcohol; GO:1905957,regulation of cellular response to alcohol; GO:1905958,negative regulation of cellular response to alcohol; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009893,positive regulation of metabolic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016570,histone modification; GO:0016574,histone ubiquitination; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0031056,regulation of histone modification; GO:0031058,positive regulation of histone modification; GO:0031396,regulation of protein ubiquitination; GO:0031398,positive regulation of protein ubiquitination; GO:0031399,regulation of protein modification process; GO:0031401,positive regulation of protein modification process; GO:0032446,protein modification by small protein conjugation; GO:0033182,regulation of histone ubiquitination; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0048518,positive regulation of biological process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051247,positive regulation of protein metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1903320,regulation of protein modification by small protein conjugation or removal; GO:1903322,positive regulation of protein modification by small protein conjugation or removal; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0016310,phosphorylation; GO:0044237,cellular metabolic process; GO:0046903,secretion; GO:0140352,export from cell; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity; GO:0005794,Golgi apparatus; GO:0031984,organelle subcompartment; GO:0098791,Golgi apparatus subcompartment","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["MS01G09980",26.075,21.5892,17.1472,38.8997,31.2005,37.3396,40.2005,28.1468,41.8439,20.4891,22.2772,24.0947,32.6997,31.3049,28.0302,1883,1554,1213,2055,1969,2265,2204,1443,2730,1201,1377,1761,1853,1769,1587,0.226830177,0.237997629,0.32827987,false,0.795405113,"3.73211E-05",0.000113844,false,0.93752554,"5.69665E-06","1.99648E-05",false,1.040419233,"3.87555E-06","1.34005E-05","up",0.827636094,"5.44673E-06","4.30255E-05",false,0.261238125,0.160225122,0.327515866,false,0.102250196,0.59199348,0.888250843,false,0.727650221,"1.32826E-07","2.76432E-06",false,0.166722138,0.257496042,0.547127275,false,"chr_001",9567415,9570996,"-","MS01G09980","--","--","--","uncharacterized protein LOC126601724 [Malus sylvestris]","--","A0A5N5GZ69_9ROSA SubName: Full=Myosin-11-like {ECO:0000313|EMBL:KAB2619082.1};","--","--","--","--","--","--"]
["MS01G10010",74.7759,136.4192,100.8168,1.3918,0.7767,0.8754,0.5215,0.3984,0.0626,20.1387,42.4906,36.886,3.3878,7.6621,5.0501,1322,2404,1746,18,12,13,7,5,1,289,643,660,47,106,70,-1.474294655,"6.61583E-07","3.52769E-06","down",-3.988211532,"6.95043E-40","3.45614E-38","down",-6.481488008,"2.40345E-76","6.62863E-74","down",-8.088269916,"4.30238E-62","4.42892E-60","down",-6.595282359,"1.15208E-36","2.27263E-34","down",-4.065014277,"1.30156E-11","6.93991E-10","down","NA","NA","NA","NA",-4.990016508,"3.8002E-39","5.67769E-36","down",-2.463790552,"3.60785E-08","2.7625E-06","down","chr_001",9595531,9596286,"-","MS01G10010","--","--","--","hypothetical protein DVH24_012086 [Malus domestica]","14KD_DAUCA RecName: Full=14 kDa proline-rich protein DC2.15; Flags: Precursor;","A0A498HR39_MALDO RecName: Full=AAI domain-containing protein {ECO:0000259|SMART:SM00499};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF14547.9:Hydrophobic seed protein","--","--","--"]
["MS01G10070",7.1256,6.9212,7.1429,12.2636,11.4259,14.0213,12.4047,10.8577,12.1405,8.6948,9.5974,10.8524,9.9771,10.3918,10.6131,942,912,925,1186,1320,1557,1245,1019,1450,933,1086,1452,1035,1075,1100,0.645702162,"4.42738E-07","2.43321E-06",false,0.840092732,"1.3268E-14","1.27571E-13",false,1.042867971,"2.0254E-17","2.70714E-16","up",1.023569703,"3.21824E-16","3.33947E-15","up",0.390882581,0.004979268,0.017167263,false,0.198593519,0.109634706,0.252343111,false,-0.021247566,0.872570243,0.970997374,false,0.414753552,0.002956325,0.015107325,false,0.227906706,0.063473115,0.246407255,false,"chr_001",9613270,9621176,"+","MS01G10070","--","K11838 ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1 (A)","ko03083: Polycomb repressive complex","hypothetical protein DVH24_012083 [Malus domestica]","UBP13_ARATH RecName: Full=Ubiquitin C-terminal hydrolase 13 {ECO:0000303|PubMed:11115897}; EC=3.4.19.12 {ECO:0000255|PROSITE-ProRule:PRU10092, ECO:0000255|PROSITE-ProRule:PRU10093}; AltName: Full=Deubiquitinating enzyme 13 {ECO:0000303|PubMed:11115897}; Short=AtUBP13 {ECO:0000303|PubMed:11115897}; AltName: Full=Ubiquitin thioesterase 13 {ECO:0000303|PubMed:11115897}; AltName: Full=Ubiquitin-specific-processing protease 13 {ECO:0000303|PubMed:11115897};","A0A498HN76_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72399.1};","Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005634,nucleus; GO:0009506,plasmodesma; GO:0004843,cysteine-type deubiquitinase activity; GO:0004197,cysteine-type endopeptidase activity; GO:0009867,jasmonic acid mediated signaling pathway; GO:0010078,maintenance of root meristem identity; GO:0016579,protein deubiquitination; GO:0070646,protein modification by small protein removal; GO:0031647,regulation of protein stability; GO:2000280,regulation of root development; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0019783,ubiquitin-like protein peptidase activity; GO:0101005,deubiquitinase activity; GO:0140096,catalytic activity, acting on a protein; GO:0004175,endopeptidase activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009753,response to jasmonic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070542,response to fatty acid; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071395,cellular response to jasmonic acid stimulus; GO:0071396,cellular response to lipid; GO:0071398,cellular response to fatty acid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0010015,root morphogenesis; GO:0010073,meristem maintenance; GO:0010074,maintenance of meristem identity; GO:0019827,stem cell population maintenance; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048364,root development; GO:0048507,meristem development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0098727,maintenance of cell number; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0065008,regulation of biological quality; GO:0050793,regulation of developmental process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF00917.29:MATH domain","--","--","--"]
["MS01G10110",10.4024,13.0628,12.6385,8.2869,3.5684,4.0587,4.8891,4.7859,9.3503,2.738,3.249,2.0005,3.2622,3.2416,2.6269,894,1119,1064,521,268,293,319,292,726,191,239,174,220,218,177,-1.992747619,"3.14803E-21","8.32834E-20","down",-1.688519508,"7.69303E-23","1.40525E-21","down",-0.96613164,0.003041356,0.006485063,false,-0.652697391,0.0123991,0.023115254,false,1.351980697,"1.33912E-05","9.62043E-05","up",1.054528084,0.000177651,0.001577703,"up",0.31608774,0.407908367,0.808719616,false,1.038650563,0.00414054,0.01977747,"up",0.745403441,0.025931284,0.138483395,false,"chr_001",9642409,9648345,"-","MS01G10110","--","K00696 sucrose-phosphate synthase [EC:2.4.1.14] | (RefSeq) SPS; probable sucrose-phosphate synthase 1 (A)","ko00500: Starch and sucrose metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","probable sucrose-phosphate synthase 1 [Malus sylvestris]","SPSA1_CITUN RecName: Full=Probable sucrose-phosphate synthase 1; EC=2.4.1.14; AltName: Full=UDP-glucose-fructose-phosphate glucosyltransferase 1;","K4HW86_MALDO RecName: Full=Sucrose-phosphate synthase {ECO:0000256|ARBA:ARBA00012536, ECO:0000256|RuleBase:RU368006}; EC=2.4.1.14 {ECO:0000256|ARBA:ARBA00012536, ECO:0000256|RuleBase:RU368006};","Glycosyltransferase","GO:0016157,sucrose synthase activity; GO:0046524,sucrose-phosphate synthase activity; GO:0005986,sucrose biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0005975,carbohydrate metabolic process; GO:0005984,disaccharide metabolic process; GO:0005985,sucrose metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009311,oligosaccharide metabolic process; GO:0009312,oligosaccharide biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044262,cellular carbohydrate metabolic process; GO:0046351,disaccharide biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process","PF00534.23:Glycosyl transferases group 1","--","--","--"]
["MS01G10180",8.7604,15.3684,15.5391,16.5404,12.9876,20.6279,14.4078,12.9876,9.0269,32.0798,27.4245,24.5569,19.1514,32.0395,25.6502,362,633,629,500,469,716,452,381,337,1076,970,1027,621,1036,831,1.278565234,"2.88147E-07","1.63217E-06","up",1.246537825,"1.45652E-06","5.55814E-06","up",0.547667634,0.041222273,0.06733461,false,0.171946423,0.548777591,0.62484422,false,-1.096210223,"7.51753E-06","5.74813E-05","down",-1.062731204,"4.19228E-05",0.000467632,"down",-0.379365836,0.138261809,0.591010163,false,-0.71414809,0.00083677,0.005415732,false,-0.674489946,0.004548881,0.040712267,false,"chr_001",9699279,9703732,"-","MS01G10180","--","K07964 heparanase [EC:3.2.1.166] | (RefSeq) heparanase-like protein 3 isoform X1 (A)","ko00531: Glycosaminoglycan degradation; ko01100: Metabolic pathways","heparanase-like protein 3 isoform X2 [Malus domestica]","HPSE3_ARATH RecName: Full=Heparanase-like protein 3; EC=3.2.-.-; Flags: Precursor;","A0A540M7Q0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD94718.1};","--","GO:0005576,extracellular region; GO:0005765,lysosomal membrane; GO:0004566,beta-glucuronidase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0000323,lytic vacuole; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005764,lysosome; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0098852,lytic vacuole membrane","PF03662.17:Glycosyl hydrolase family 79, N-terminal domain","--","--","--"]
["MS01G10220",0.964,1.224,1.3377,0.4941,0.3447,0.5021,1.1309,0.488,0.8669,0.3711,0.7743,0.4762,0.4991,0.1347,0.4803,64,81,87,24,20,28,57,23,52,20,44,32,26,7,25,-0.941304512,0.006776915,0.015571465,false,-1.363109193,0.002259471,0.00495089,"down",-1.186622888,0.00042708,0.00107641,"down",-0.216677333,0.547377725,0.623735534,false,0.734532616,0.102856248,0.201735454,false,1.160622512,0.031599056,0.102826984,false,0.965673477,0.024492092,0.304074091,false,-0.229551804,0.604076107,0.761351996,false,0.202885442,0.71336043,0.882218047,false,"chr_001",9725151,9731409,"-","MS01G10220","--","--","--","topless-related protein 1-like isoform X4 [Malus sylvestris]","TPR1_ARATH RecName: Full=Topless-related protein 1; AltName: Full=Protein MODIFIER OF SNC1 10;","A0A498HSD6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72387.1};","WD40 repeat-containing protein","GO:0005634,nucleus; GO:0010072,primary shoot apical meristem specification; GO:0006355,regulation of DNA-templated transcription; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009653,anatomical structure morphogenesis; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0009793,embryo development ending in seed dormancy; GO:0009888,tissue development; GO:0009933,meristem structural organization; GO:0010014,meristem initiation; GO:0010016,shoot system morphogenesis; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048367,shoot system development; GO:0048507,meristem development; GO:0048508,embryonic meristem development; GO:0048532,anatomical structure arrangement; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090421,embryonic meristem initiation; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00400.35:WD domain, G-beta repeat","--","--","--"]
["MS01G10270",0.8562,2.1981,0.8741,0,0,0.06,0,0.3547,0.1951,0.3413,0.3825,0.0746,0.0963,0,0.0321,34,87,34,0,0,2,0,10,7,11,13,3,3,0,1,-2.134224309,0.001114866,0.003120946,"down",-4.640773404,"3.95628E-07","1.62821E-06","down",-5.796484298,"1.10483E-06","4.32323E-06","down",-2.569264587,0.000926067,0.002162689,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",9787695,9792044,"-","MS01G10270","--","--","--","uncharacterized protein LOC103456246 [Malus domestica]","--","A0A540M8D1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD94729.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G10290",0.1485,0.0894,0.1819,4.0593,0.5777,0.8131,0.8996,0.5856,2.8596,0.4024,0.8326,0.4695,0.4541,1.3662,0.7575,5,3,6,100,17,23,23,14,87,11,24,16,12,36,20,"NA","NA","NA","NA",2.908171435,"1.33397E-05","4.3867E-05","up",3.916079979,"2.36629E-06","8.81138E-06","up",3.637553334,"5.04776E-07","1.98586E-06","up",1.452793976,0.024220656,0.063874253,false,0.750282169,0.239986582,0.430611862,false,-0.272250678,0.729631367,0.931927493,false,1.726314706,0.021114444,0.071807322,false,1.026073662,0.164656457,0.429618849,false,"chr_001",9796854,9798978,"+","MS01G10290","--","K07192 flotillin | (RefSeq) uncharacterized protein LOC103400265 (A)","--","hypothetical protein C1H46_019673 [Malus baccata]","FLOT4_MEDTR RecName: Full=Flotillin-like protein 4;","A0A540M7K3_MALBA RecName: Full=Flotillin-like {ECO:0000256|RuleBase:RU366054};","Flotillins","GO:0016324,apical plasma membrane; GO:0005901,caveola; GO:0005886,plasma membrane; GO:0009877,nodulation; GO:0008150,biological_process; GO:0009653,anatomical structure morphogenesis; GO:0032502,developmental process; GO:0048646,anatomical structure formation involved in morphogenesis; GO:0048856,anatomical structure development; GO:0005575,cellular_component; GO:0016020,membrane; GO:0045177,apical part of cell; GO:0071944,cell periphery; GO:0098590,plasma membrane region; GO:0110165,cellular anatomical entity; GO:0044853,plasma membrane raft; GO:0045121,membrane raft; GO:0098857,membrane microdomain","PF01145.28:SPFH domain / Band 7 family","--","--","--"]
["MS01G10330",3.1633,3.3709,2.2671,0.885,0.3001,1.3366,0.2914,0.6003,0.5624,0.8077,1.5606,0.9798,0.5431,0.7331,0.7735,386,410,271,79,32,137,27,52,62,80,163,121,52,70,74,-1.22203911,"1.53116E-05","6.37197E-05","down",-1.816331933,"4.88836E-13","4.06039E-12","down",-1.617931191,0.000244297,0.000643951,"down",-2.321853363,"7.44199E-14","6.30854E-13","down",-1.086862389,0.003841156,0.013784282,"down",-0.488069367,0.1644248,0.333238154,false,-0.697836653,0.178135038,0.636267693,false,-0.383960132,0.428404524,0.616064804,false,0.220194602,0.637054606,0.840639447,false,"chr_001",9814350,9822482,"+","MS01G10330","--","K11430 [histone H3]-lysine27 N-trimethyltransferase EZH2 [EC:2.1.1.356] | (RefSeq) histone-lysine N-methyltransferase CLF-like isoform X1 (A)","ko00310: Lysine degradation; ko01100: Metabolic pathways; ko03083: Polycomb repressive complex","uncharacterized protein LOC126602367 isoform X2 [Malus sylvestris]","TRX1_ORYSJ RecName: Full=Histone-lysine N-methyltransferase TRX1 {ECO:0000305}; Short=OsTrx1 {ECO:0000303|PubMed:24420930}; EC=2.1.1.364 {ECO:0000269|PubMed:24420930}; AltName: Full=Protein SET DOMAIN GROUP 723 {ECO:0000305}; AltName: Full=SET family protein 33 {ECO:0000305}; Short=OsSET33 {ECO:0000303|PubMed:23762371};","A0A540M869_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD94732.1};","Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases","GO:0000785,chromatin; GO:0005634,nucleus; GO:0042054,histone methyltransferase activity; GO:0018024,histone-lysine N-methyltransferase activity; GO:0046872,metal ion binding; GO:0006325,chromatin organization; GO:0009908,flower development; GO:0048578,positive regulation of long-day photoperiodism, flowering; GO:0006357,regulation of transcription by RNA polymerase II; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008168,methyltransferase activity; GO:0008276,protein methyltransferase activity; GO:0016740,transferase activity; GO:0016741,transferase activity, transferring one-carbon groups; GO:0140096,catalytic activity, acting on a protein; GO:0008170,N-methyltransferase activity; GO:0008757,S-adenosylmethionine-dependent methyltransferase activity; GO:0016278,lysine N-methyltransferase activity; GO:0016279,protein-lysine N-methyltransferase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009648,photoperiodism; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0048518,positive regulation of biological process; GO:0048571,long-day photoperiodism; GO:0048573,photoperiodism, flowering; GO:0048574,long-day photoperiodism, flowering; GO:0048580,regulation of post-embryonic development; GO:0048582,positive regulation of post-embryonic development; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0048586,regulation of long-day photoperiodism, flowering; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0050896,response to stimulus; GO:0051094,positive regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0051240,positive regulation of multicellular organismal process; GO:0065007,biological regulation; GO:2000026,regulation of multicellular organismal development; GO:2000028,regulation of photoperiodism, flowering; GO:2000241,regulation of reproductive process; GO:2000243,positive regulation of reproductive process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005694,chromosome; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle","PF00856.31:SET domain","PHD","TR","PHD"]
["MS01G10360",21.707,22.3755,14.1067,0.4267,0.1948,0.3378,0.1869,0.2398,0.1884,0.6292,0.8951,0.3925,0.4701,0.1088,0.1086,765,786,487,11,6,10,5,6,6,18,27,14,13,3,3,-4.760248488,"9.83367E-47","1.15315E-44","down",-6.110415324,"4.5523E-44","2.70003E-42","down",-5.735909834,"2.46544E-49","2.2861E-47","down",-6.299162012,"1.55088E-47","8.7219E-46","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",9835960,9837739,"+","MS01G10360","--","--","--","hypothetical protein C1H46_019678 [Malus baccata]","--","A0A540M7P6_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD94735.1};","--","--","--","--","--","--"]
["MS01G10410",18.8525,19.0078,16.3458,6.0587,8.3577,9.1038,5.838,7.6062,7.3588,17.5348,13.2735,14.094,10.8589,8.7355,13.1775,604,607,513,142,234,245,142,173,213,456,364,457,273,219,331,-0.080994855,0.673755163,0.751865066,false,-0.435562509,0.026335834,0.045179951,false,-0.991061971,"2.02109E-06","7.60777E-06",false,-1.10187626,"3.36129E-09","1.74669E-08","down",-1.006423085,"4.24179E-06","3.45349E-05","down",-0.649671716,0.00396862,0.02036033,false,-0.111896833,0.641098697,0.905729683,false,-0.89231863,0.000193013,0.00158217,false,-0.529917676,0.031676706,0.15820089,false,"chr_001",9875235,9878749,"-","MS01G10410","--","--","--","hypothetical protein DVH24_012054 [Malus domestica]","--","A0A498HNQ8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72370.1};","--","--","PF10481.12:Cenp-F N-terminal domain","--","--","--"]
["MS01G10450",3.6604,4.5478,2.5241,112.8315,433.9256,168.94,132.7647,164.3456,57.8492,281.385,257.8038,181.9152,206.7603,229.6763,316.8908,151,187,102,3405,15643,5854,4158,4813,2156,9422,9103,7595,6693,7414,10249,6.257436577,"5.4405E-124","8.9318E-121","up",6.418039618,"2.0158E-152","3.1337E-149","up",6.291781257,"2.45455E-41","1.53918E-39","up",5.343813661,"9.18407E-45","4.63095E-43","up",-0.903000566,0.015064292,0.043193327,false,-1.062540915,0.00241742,0.013700036,"down",-0.960405667,0.204538706,0.662046285,false,0.056183082,0.902046448,0.948455164,false,-0.094839128,0.830759049,0.937225269,false,"chr_001",9959431,9972282,"-","MS01G10450","--","K21384 3,5-dihydroxybiphenyl/4-hydroxycoumarin synthase [EC:2.3.1.177 2.3.1.208] | (RefSeq) 4-hydroxycoumarin synthase 2 (A)","--","4-hydroxycoumarin synthase 2 [Malus domestica]","BIPS3_SORAU RecName: Full=4-hydroxycoumarin synthase 2; EC=2.3.1.208; AltName: Full=Biphenyl synthase 3; Short=SaBIS3;","K9MST3_MALDO SubName: Full=BIS3 biphenyl synthase {ECO:0000313|EMBL:AFX71922.1}; EC=2.3.1.177 {ECO:0000313|EMBL:AFX71922.1};","--","GO:0033815,biphenyl synthase activity; GO:1901886,2-hydroxybenzoyl-CoA catabolic process; GO:1901884,4-hydroxycoumarin biosynthetic process; GO:0009805,coumarin biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0006139,nucleobase-containing compound metabolic process; GO:0006163,purine nucleotide metabolic process; GO:0006195,purine nucleotide catabolic process; GO:0006637,acyl-CoA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009117,nucleotide metabolic process; GO:0009150,purine ribonucleotide metabolic process; GO:0009154,purine ribonucleotide catabolic process; GO:0009166,nucleotide catabolic process; GO:0009259,ribonucleotide metabolic process; GO:0009261,ribonucleotide catabolic process; GO:0009987,cellular process; GO:0018958,phenol-containing compound metabolic process; GO:0019336,phenol-containing compound catabolic process; GO:0019439,aromatic compound catabolic process; GO:0019637,organophosphate metabolic process; GO:0019693,ribose phosphate metabolic process; GO:0033865,nucleoside bisphosphate metabolic process; GO:0033869,nucleoside bisphosphate catabolic process; GO:0033875,ribonucleoside bisphosphate metabolic process; GO:0034031,ribonucleoside bisphosphate catabolic process; GO:0034032,purine nucleoside bisphosphate metabolic process; GO:0034034,purine nucleoside bisphosphate catabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034655,nucleobase-containing compound catabolic process; GO:0035383,thioester metabolic process; GO:0043603,cellular amide metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044270,cellular nitrogen compound catabolic process; GO:0044273,sulfur compound catabolic process; GO:0044281,small molecule metabolic process; GO:0046434,organophosphate catabolic process; GO:0046483,heterocycle metabolic process; GO:0046700,heterocycle catabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0072521,purine-containing compound metabolic process; GO:0072523,purine-containing compound catabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901136,carbohydrate derivative catabolic process; GO:1901292,nucleoside phosphate catabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901616,organic hydroxy compound catabolic process; GO:1901885,2-hydroxybenzoyl-CoA metabolic process; GO:0009058,biosynthetic process; GO:0009698,phenylpropanoid metabolic process; GO:0009699,phenylpropanoid biosynthetic process; GO:0009804,coumarin metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019748,secondary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044550,secondary metabolite biosynthetic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901882,4-hydroxycoumarin metabolic process","PF00195.22:Chalcone and stilbene synthases, N-terminal domain","--","--","--"]
["MS01G10460",1.3262,2.661,0.8123,26.6687,88.8601,33.7509,39.594,52.3881,33.2721,85.7569,39.8354,33.603,47.095,58.8645,63.8259,45,90,27,662,2635,962,1020,1262,1020,2362,1157,1154,1254,1563,1698,5.253104142,"1.96075E-15","3.06735E-14","up",5.42800411,"1.14299E-59","1.20573E-57","up",5.189148889,"2.11741E-12","1.7384E-11","up",4.98890618,"1.12399E-39","4.63141E-38","up",-0.248811167,0.510067151,0.653568835,false,-0.424713734,0.056490981,0.156908051,false,-0.209944394,0.638888796,0.904583574,false,-0.039562298,0.937740167,0.96881402,false,-0.206830853,0.623280882,0.834110636,false,"chr_001",9983981,9985839,"-","MS01G10460","--","K21384 3,5-dihydroxybiphenyl/4-hydroxycoumarin synthase [EC:2.3.1.177 2.3.1.208] | (RefSeq) 4-hydroxycoumarin synthase 1 (A)","--","3,5-dihydroxybiphenyl synthase-like [Pyrus ussuriensis x Pyrus communis]","BIPS1_SORAU RecName: Full=3,5-dihydroxybiphenyl synthase; EC=2.3.1.177; AltName: Full=Biphenyl synthase 1; Short=SaBIS1;","A0A5N5H0V2_9ROSA SubName: Full=3,5-dihydroxybiphenyl synthase-like {ECO:0000313|EMBL:KAB2619000.1};","--","GO:0033815,biphenyl synthase activity; GO:0042802,identical protein binding; GO:0052315,phytoalexin biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0005488,binding; GO:0005515,protein binding; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009403,toxin biosynthetic process; GO:0009404,toxin metabolic process; GO:0009987,cellular process; GO:0019748,secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044550,secondary metabolite biosynthetic process; GO:0052314,phytoalexin metabolic process","PF00195.22:Chalcone and stilbene synthases, N-terminal domain","--","--","--"]
["MS01G10530",6.8254,8.0191,7.337,19.2897,13.7386,15.7225,19.4319,14.572,20.5526,8.2669,10.5104,11.8304,13.6653,10.0255,11.202,415,486,437,858,730,803,897,629,1129,408,547,728,652,477,534,0.648317435,0.000159725,0.000548013,false,0.948918885,"1.1971E-07","5.30994E-07",false,1.34911477,"3.65969E-13","3.2637E-12","up",1.578467742,"3.88629E-19","5.00291E-18","up",0.943599273,"1.53902E-06","1.37692E-05",false,0.645844159,0.001338701,0.008417606,false,0.228210589,0.261304939,0.714270827,false,0.718363335,0.000381695,0.002812142,false,0.425395622,0.039827102,0.1832245,false,"chr_001",10081969,10090288,"-","MS01G10530","--","K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) UDP-sugar pyrophosphorylase (A)","ko00040: Pentose and glucuronate interconversions; ko00052: Galactose metabolism; ko00053: Ascorbate and aldarate metabolism; ko00520: Amino sugar and nucleotide sugar metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01250: Biosynthesis of nucleotide sugars","hypothetical protein DVH24_012041 [Malus domestica]","USP_CUCME RecName: Full=UDP-sugar pyrophosphorylase; EC=2.7.7.64; AltName: Full=UDP-galactose/glucose pyrophosphorylase; Short=UGGPase;","A0A498HSA8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72357.1};","UDP-N-acetylglucosamine pyrophosphorylase","GO:0005829,cytosol; GO:0090406,pollen tube; GO:0047350,glucuronate-1-phosphate uridylyltransferase activity; GO:0010491,UTP:arabinose-1-phosphate uridylyltransferase activity; GO:0017103,UTP:galactose-1-phosphate uridylyltransferase activity; GO:0003983,UTP:glucose-1-phosphate uridylyltransferase activity; GO:0047338,UTP:xylose-1-phosphate uridylyltransferase activity; GO:0009226,nucleotide-sugar biosynthetic process; GO:0009555,pollen development; GO:0052573,UDP-D-galactose metabolic process; GO:0006011,UDP-glucose metabolic process; GO:0046398,UDP-glucuronate metabolic process; GO:0033356,UDP-L-arabinose metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0070569,uridylyltransferase activity; GO:0051748,UTP-monosaccharide-1-phosphate uridylyltransferase activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009225,nucleotide-sugar metabolic process; GO:0009987,cellular process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0006793,phosphorus metabolic process; GO:0006082,organic acid metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0042995,cell projection; GO:0120025,plasma membrane bounded cell projection","PF01704.21:UTP--glucose-1-phosphate uridylyltransferase","--","--","--"]
["MS01G10550",8.1529,11.8936,7.5585,1.9333,2.0468,3.4169,1.4245,1.582,2.3021,6.457,7.9213,10.3984,6.0961,10.9506,6.685,196,285,178,34,43,69,26,27,50,126,163,253,115,206,126,0.026947275,0.920167663,0.942591327,false,0.068903065,0.812985403,0.855412862,false,-1.694456223,"1.25204E-07","5.62237E-07","down",-2.096526851,"2.29994E-11","1.52731E-10","down",-2.107264802,"6.99412E-12","1.56314E-10","down",-2.149286087,"1.76767E-10","7.43415E-09","down",-0.402505958,0.28931786,0.735357578,false,-1.702647602,"4.6682E-08","1.07041E-06","down",-1.738780675,"3.14461E-07","1.81967E-05","down","chr_001",10095890,10097305,"-","MS01G10550","--","--","--","NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Malus domestica]","NDHM_POPJC RecName: Full=NAD(P)H-quinone oxidoreductase subunit M, chloroplastic {ECO:0000305}; EC=7.1.1.- {ECO:0000305}; AltName: Full=NAD(P)H dehydrogenase subunit M {ECO:0000305}; Short=NDH subunit M {ECO:0000305}; Short=NDH-M {ECO:0000250|UniProtKB:Q2V2S7}; AltName: Full=NADH-plastoquinone oxidoreductase subunit M {ECO:0000305}; Flags: Precursor;","A0A498HRV0_MALDO RecName: Full=NAD(P)H-quinone oxidoreductase subunit M, chloroplastic {ECO:0000256|ARBA:ARBA00017454}; AltName: Full=NAD(P)H dehydrogenase subunit M {ECO:0000256|ARBA:ARBA00031769}; AltName: Full=NADH-plastoquinone oxidoreductase subunit M {ECO:0000256|ARBA:ARBA00029860};","--","GO:0009535,chloroplast thylakoid membrane; GO:0016655,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; GO:0048038,quinone binding; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016651,oxidoreductase activity, acting on NAD(P)H; GO:0005488,binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity","PF10664.12:Cyanobacterial and plastid NDH-1 subunit M","--","--","--"]
["MS01G10570",12.5703,14.7928,10.9275,8.7067,5.5225,7.2152,6.7264,5.059,7.0966,4.5111,6.884,4.5329,6.0608,6.0061,5.0998,896,1051,763,454,344,432,364,256,457,261,420,327,339,335,285,-1.088077019,"5.25767E-07","2.85238E-06","down",-0.866127615,"1.96637E-06","7.34455E-06",false,-0.628329151,0.00527033,0.010684866,false,-0.741869419,0.000234157,0.00060702,false,0.357896992,0.123224786,0.231419484,false,0.140835352,0.464237284,0.651792916,false,-0.113585754,0.616308332,0.897340921,false,0.474096533,0.059430211,0.156861497,false,0.261927932,0.21763346,0.500361998,false,"chr_001",10109352,10113492,"-","MS01G10570","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1-like (A)","ko04626: Plant-pathogen interaction","hypothetical protein C1H46_038832 [Malus baccata]","STU_ARATH RecName: Full=Protein kinase STUNTED {ECO:0000303|PubMed:22492352}; EC=2.7.11.- {ECO:0000255|PROSITE-ProRule:PRU00159};","A0A540KN84_MALBA RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0005737,cytoplasm; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0016787,hydrolase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004714,transmembrane receptor protein tyrosine kinase activity; GO:0009740,gibberellic acid mediated signaling pathway; GO:0010476,gibberellin mediated signaling pathway; GO:0051781,positive regulation of cell division; GO:0006468,protein phosphorylation; GO:0009739,response to gibberellin; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0004713,protein tyrosine kinase activity; GO:0004888,transmembrane signaling receptor activity; GO:0019199,transmembrane receptor protein kinase activity; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0051301,cell division; GO:0051302,regulation of cell division; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G10610",41.7339,40.3344,56.1503,190.333,150.2986,188.2469,172.2559,133.7709,154.77,168.8979,197.0984,218.6439,185.9634,209.3664,173.5511,1909,1839,2516,6369,6008,7233,5982,4344,6396,6271,7717,10122,6675,7494,6224,2.267944791,"1.5582E-41","1.45717E-39","up",2.337254029,"4.80426E-47","3.19602E-45","up",2.150870717,"9.04312E-34","3.89809E-32","up",2.024887023,"1.0882E-29","2.68888E-28","up",-0.23140008,0.143397574,0.260139245,false,-0.298256885,0.055891181,0.155836438,false,-0.128436605,0.423312221,0.816140516,false,-0.100325594,0.504691779,0.685257834,false,-0.161594303,0.273284607,0.563808793,false,"chr_001",10162293,10166259,"-","MS01G10610","--","K00166 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] | (RefSeq) 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like (A)","ko00280: Valine, leucine and isoleucine degradation; ko00640: Propanoate metabolism; ko00785: Lipoic acid metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","hypothetical protein DVH24_012033 [Malus domestica]","ODBA2_ARATH RecName: Full=2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial; EC=1.2.4.4; AltName: Full=Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; Short=BCKDE1A; Short=BCKDH E1-alpha; Flags: Precursor;","A0A498HN27_MALDO RecName: Full=E1_dh domain-containing protein {ECO:0000259|Pfam:PF00676};","Branched chain alpha-keto acid dehydrogenase complex, alpha subunit","GO:0005947,mitochondrial alpha-ketoglutarate dehydrogenase complex; GO:0005739,mitochondrion; GO:0003863,3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; GO:0046872,metal ion binding; GO:0009083,branched-chain amino acid catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016624,oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor; GO:0016903,oxidoreductase activity, acting on the aldehyde or oxo group of donors; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009063,cellular amino acid catabolic process; GO:0009081,branched-chain amino acid metabolic process; GO:0009987,cellular process; GO:0016054,organic acid catabolic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044281,small molecule metabolic process; GO:0044282,small molecule catabolic process; GO:0046395,carboxylic acid catabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005759,mitochondrial matrix; GO:0030062,mitochondrial tricarboxylic acid cycle enzyme complex; GO:0031974,membrane-enclosed lumen; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0045239,tricarboxylic acid cycle enzyme complex; GO:0045240,dihydrolipoyl dehydrogenase complex; GO:0070013,intracellular organelle lumen; GO:0098798,mitochondrial protein-containing complex; GO:0110165,cellular anatomical entity; GO:1902494,catalytic complex; GO:1990204,oxidoreductase complex","PF00676.23:Dehydrogenase E1 component","--","--","--"]
["MS01G10630",1.9942,2.2482,2.6443,0.7869,0.6352,1.7377,1.1644,0.8688,1.1605,2.2542,4.6835,3.1079,1.9911,2.4171,1.652,97,109,126,28,27,71,43,30,51,89,195,153,76,92,63,0.722302578,0.012343455,0.026397558,false,0.110589109,0.660306954,0.725006168,false,-0.92372328,0.018298883,0.032739701,false,-0.821070647,0.003004815,0.006383222,false,-1.533786061,"4.95425E-06","3.95866E-05","down",-0.916723537,0.00244517,0.013826151,false,0.101337134,0.816803313,0.955485305,false,-1.633569061,0.000132461,0.001156979,"down",-1.010465555,0.012397272,0.083791167,false,"chr_001",10178900,10180979,"+","MS01G10630","--","K05681 ATP-binding cassette, subfamily G (WHITE), member 2 | (RefSeq) ABC transporter G family member 5 (A)","ko02010: ABC transporters","hypothetical protein DVH24_012031 [Malus domestica]","AB5G_ARATH RecName: Full=ABC transporter G family member 5; Short=ABC transporter ABCG.5; Short=AtABCG5; AltName: Full=White-brown complex homolog protein 5; Short=AtWBC5;","A0A498HSA0_MALDO RecName: Full=ABC transporter domain-containing protein {ECO:0000259|PROSITE:PS50893};","Transporter, ABC superfamily (Breast cancer resistance protein)","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0005524,ATP binding; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005215,transporter activity; GO:0015399,primary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0140657,ATP-dependent activity; GO:0006810,transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF01061.27:ABC-2 type transporter","--","--","--"]
["MS01G10670",1.4869,1.8094,1.1806,1.3362,1.0083,1.3604,1.7953,1.1442,1.1581,0.5767,1.0776,0.7346,0.4737,0.5982,0.7902,108,131,84,71,64,83,99,59,76,34,67,54,27,34,45,-0.730977547,0.021841906,0.04331299,false,-0.979080368,0.002159601,0.004753923,false,-0.067643099,0.810841171,0.849766632,false,0.154329417,0.621753201,0.692336629,false,0.896575655,0.010624293,0.032279187,false,1.147934015,0.00092016,0.006177485,"up",0.219027131,0.470133554,0.842241788,false,0.678349775,0.036333301,0.108453567,false,0.935627825,0.003227762,0.031901294,false,"chr_001",10213976,10231989,"+","MS01G10670","--","K03165 DNA topoisomerase III [EC:5.6.2.1] | (RefSeq) DNA topoisomerase 3-alpha (A)","ko03440: Homologous recombination","DNA topoisomerase 3-alpha [Malus domestica]","TOP3A_ARATH RecName: Full=DNA topoisomerase 3-alpha; EC=5.6.2.1 {ECO:0000255|PROSITE-ProRule:PRU10131};","A0A5N5GUL2_9ROSA RecName: Full=DNA topoisomerase {ECO:0000256|ARBA:ARBA00012891, ECO:0000256|RuleBase:RU362092}; EC=5.6.2.1 {ECO:0000256|ARBA:ARBA00012891, ECO:0000256|RuleBase:RU362092};","DNA topoisomerase III alpha","GO:0005694,chromosome; GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003916,DNA topoisomerase activity; GO:0003917,DNA topoisomerase type I (single strand cut, ATP-independent) activity; GO:0008270,zinc ion binding; GO:0007059,chromosome segregation; GO:0006281,DNA repair; GO:0006265,DNA topological change; GO:0051321,meiotic cell cycle; GO:0000278,mitotic cell cycle; GO:0000712,resolution of meiotic recombination intermediates; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016853,isomerase activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0008152,metabolic process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006996,organelle organization; GO:0016043,cellular component organization; GO:0051276,chromosome organization; GO:0071103,DNA conformation change; GO:0071840,cellular component organization or biogenesis; GO:0000003,reproduction; GO:0007049,cell cycle; GO:0022414,reproductive process; GO:0000280,nuclear division; GO:0006310,DNA recombination; GO:0007127,meiosis I; GO:0007131,reciprocal meiotic recombination; GO:0022402,cell cycle process; GO:0035825,homologous recombination; GO:0045132,meiotic chromosome segregation; GO:0048285,organelle fission; GO:0051304,chromosome separation; GO:0051307,meiotic chromosome separation; GO:0061982,meiosis I cell cycle process; GO:0098813,nuclear chromosome segregation; GO:0140013,meiotic nuclear division; GO:0140527,reciprocal homologous recombination; GO:1903046,meiotic cell cycle process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle","PF01131.23:DNA topoisomerase","--","--","--"]
["MS01G10810",24.5623,22.8122,26.655,5.9439,11.6748,5.5553,9.0521,10.6067,6.1746,18.7102,13.9515,12.0718,11.1095,7.129,11.2275,1158,1072,1231,205,481,220,324,355,263,716,563,576,411,263,415,-0.531618039,0.01186154,0.0254961,false,-1.033589506,"4.13087E-07","1.69652E-06","down",-1.44223399,"5.39442E-06","1.89839E-05","down",-1.226846591,"2.12639E-07","8.77882E-07","down",-0.683398684,0.017935113,0.049883953,false,-0.179109772,0.525033292,0.702472866,false,0.20868468,0.578214307,0.884217737,false,-0.891155732,0.012675059,0.048400174,false,-0.379392817,0.284900774,0.576888789,false,"chr_001",10335321,10344232,"+","MS01G10810","--","K18875 enhanced disease susceptibility 1 protein | (RefSeq) protein EDS1-like (A)","ko04626: Plant-pathogen interaction","lipase-like PAD4 isoform X1 [Malus sylvestris]","PAD4_ARATH RecName: Full=Lipase-like PAD4; EC=2.3.1.-; AltName: Full=Protein ENHANCED DISEASE SUSCEPTIBILITY 9; AltName: Full=Protein PHYTOALEXIN DEFICIENT 4; Short=AtPAD4;","A0A540MSA8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE01677.1};","--","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0106093,EDS1 disease-resistance complex; GO:0005634,nucleus; GO:0016298,lipase activity; GO:0016740,transferase activity; GO:0010618,aerenchyma formation; GO:0071327,cellular response to trehalose stimulus; GO:0042742,defense response to bacterium; GO:0050829,defense response to Gram-negative bacterium; GO:0002213,defense response to insect; GO:0009873,ethylene-activated signaling pathway; GO:0060866,leaf abscission; GO:0010150,leaf senescence; GO:0016042,lipid catabolic process; GO:0031348,negative regulation of defense response; GO:0010105,negative regulation of ethylene-activated signaling pathway; GO:0009626,plant-type hypersensitive response; GO:1901183,positive regulation of camalexin biosynthetic process; GO:0010942,positive regulation of cell death; GO:1900426,positive regulation of defense response to bacterium; GO:1900367,positive regulation of defense response to insect; GO:0080151,positive regulation of salicylic acid mediated signaling pathway; GO:0010310,regulation of hydrogen peroxide metabolic process; GO:2000022,regulation of jasmonic acid mediated signaling pathway; GO:0080142,regulation of salicylic acid biosynthetic process; GO:2000031,regulation of salicylic acid mediated signaling pathway; GO:0009617,response to bacterium; GO:0001666,response to hypoxia; GO:0009625,response to insect; GO:0051707,response to other organism; GO:0009751,response to salicylic acid; GO:0010225,response to UV-C; GO:0009627,systemic acquired resistance; GO:0009862,systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0008150,biological_process; GO:0009653,anatomical structure morphogenesis; GO:0032502,developmental process; GO:0048646,anatomical structure formation involved in morphogenesis; GO:0048856,anatomical structure development; GO:0009743,response to carbohydrate; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010353,response to trehalose; GO:0034285,response to disaccharide; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071322,cellular response to carbohydrate stimulus; GO:0071324,cellular response to disaccharide stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0098542,defense response to other organism; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009723,response to ethylene; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0007275,multicellular organism development; GO:0009838,abscission; GO:0032501,multicellular organismal process; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0090693,plant organ senescence; GO:0099402,plant organ development; GO:0006629,lipid metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0031347,regulation of defense response; GO:0048519,negative regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0080134,regulation of response to stress; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0010104,regulation of ethylene-activated signaling pathway; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023057,negative regulation of signaling; GO:0048523,negative regulation of cellular process; GO:0070297,regulation of phosphorelay signal transduction system; GO:0070298,negative regulation of phosphorelay signal transduction system; GO:1902531,regulation of intracellular signal transduction; GO:1902532,negative regulation of intracellular signal transduction; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0012501,programmed cell death; GO:0033554,cellular response to stress; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0006725,cellular aromatic compound metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009058,biosynthetic process; GO:0009403,toxin biosynthetic process; GO:0009404,toxin metabolic process; GO:0009700,indole phytoalexin biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010120,camalexin biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0019748,secondary metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042430,indole-containing compound metabolic process; GO:0042435,indole-containing compound biosynthetic process; GO:0042762,regulation of sulfur metabolic process; GO:0043455,regulation of secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044272,sulfur compound biosynthetic process; GO:0044550,secondary metabolite biosynthetic process; GO:0046217,indole phytoalexin metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051176,positive regulation of sulfur metabolic process; GO:0052314,phytoalexin metabolic process; GO:0052315,phytoalexin biosynthetic process; GO:0052317,camalexin metabolic process; GO:0052318,regulation of phytoalexin metabolic process; GO:0052319,regulation of phytoalexin biosynthetic process; GO:0052320,positive regulation of phytoalexin metabolic process; GO:0052322,positive regulation of phytoalexin biosynthetic process; GO:1900376,regulation of secondary metabolite biosynthetic process; GO:1900378,positive regulation of secondary metabolite biosynthetic process; GO:1901182,regulation of camalexin biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0010941,regulation of cell death; GO:0002831,regulation of response to biotic stimulus; GO:0002833,positive regulation of response to biotic stimulus; GO:0031349,positive regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0032103,positive regulation of response to external stimulus; GO:0048584,positive regulation of response to stimulus; GO:1900424,regulation of defense response to bacterium; GO:2000068,regulation of defense response to insect; GO:0009863,salicylic acid mediated signaling pathway; GO:0009967,positive regulation of signal transduction; GO:0010647,positive regulation of cell communication; GO:0014070,response to organic cyclic compound; GO:0023056,positive regulation of signaling; GO:0071407,cellular response to organic cyclic compound; GO:0071446,cellular response to salicylic acid stimulus; GO:0042743,hydrogen peroxide metabolic process; GO:0072593,reactive oxygen species metabolic process; GO:2000377,regulation of reactive oxygen species metabolic process; GO:0009753,response to jasmonic acid; GO:0009867,jasmonic acid mediated signaling pathway; GO:0033993,response to lipid; GO:0070542,response to fatty acid; GO:0071395,cellular response to jasmonic acid stimulus; GO:0071396,cellular response to lipid; GO:0071398,cellular response to fatty acid; GO:0006082,organic acid metabolic process; GO:0009696,salicylic acid metabolic process; GO:0009697,salicylic acid biosynthetic process; GO:0010337,regulation of salicylic acid metabolic process; GO:0010565,regulation of cellular ketone metabolic process; GO:0016053,organic acid biosynthetic process; GO:0018958,phenol-containing compound metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042180,cellular ketone metabolic process; GO:0042537,benzene-containing compound metabolic process; GO:0043436,oxoacid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046189,phenol-containing compound biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0062012,regulation of small molecule metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0009628,response to abiotic stimulus; GO:0036293,response to decreased oxygen levels; GO:0070482,response to oxygen levels; GO:0009314,response to radiation; GO:0009411,response to UV; GO:0009416,response to light stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF18117.4:Enhanced disease susceptibility 1 protein EP domain","--","--","--"]
["MS01G10820",8.3595,7.0759,8.3524,2.2716,1.7128,1.9934,2.0886,2.4122,1.6006,5.7354,6.2095,6.2042,4.106,3.4043,3.0579,659,556,645,131,118,132,125,135,114,367,419,495,254,210,189,-0.20362033,0.14285589,0.215329478,false,-0.875139516,"1.5091E-06","5.74337E-06",false,-1.781927361,"1.32345E-21","2.56142E-20","down",-1.678232262,"2.3875E-14","2.12341E-13","down",-1.463103527,"1.60345E-11","3.4067E-10","down",-0.788148726,0.001665644,0.010103762,false,0.101809832,0.698303848,0.922897073,false,-1.561580128,"4.96395E-18","6.34737E-16","down",-0.88092335,"8.19328E-05",0.001872228,false,"chr_001",10344486,10355215,"-","MS01G10820","--","K12309 beta-galactosidase [EC:3.2.1.23] | (RefSeq) beta-galactosidase 17 (A)","ko00052: Galactose metabolism; ko00511: Other glycan degradation; ko00531: Glycosaminoglycan degradation; ko00600: Sphingolipid metabolism; ko00604: Glycosphingolipid biosynthesis - ganglio series; ko01100: Metabolic pathways","beta-galactosidase 10 [Malus domestica]","BGA10_ARATH RecName: Full=Beta-galactosidase 10; Short=Lactase 10; EC=3.2.1.23; Flags: Precursor;","S5M5L7_9ROSA RecName: Full=Beta-galactosidase {ECO:0000256|ARBA:ARBA00012756, ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|ARBA:ARBA00012756, ECO:0000256|RuleBase:RU000675};","Beta-galactosidase","GO:0048046,apoplast; GO:0009536,plastid; GO:0005773,vacuole; GO:0004565,beta-galactosidase activity; GO:0005975,carbohydrate metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0015925,galactosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01301.22:Glycosyl hydrolases family 35","--","--","--"]
["MS01G10830",1.1616,0.5497,0.9845,0.1198,0.0502,0.0522,0,0.2779,0.1456,0.162,0.3329,0.2382,0.1117,0.028,0.0559,53,25,44,4,2,2,0,9,6,6,13,11,4,1,2,-1.696673309,0.001003038,0.002838882,"down",-3.488192816,"2.16691E-06","8.04274E-06","down",-3.417404802,"1.81331E-06","6.87779E-06","down",-2.39972356,0.001178027,0.002702523,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",10357034,10366471,"-","MS01G10830","--","K12309 beta-galactosidase [EC:3.2.1.23] | (RefSeq) beta-galactosidase 17 (A)","ko00052: Galactose metabolism; ko00511: Other glycan degradation; ko00531: Glycosaminoglycan degradation; ko00600: Sphingolipid metabolism; ko00604: Glycosphingolipid biosynthesis - ganglio series; ko01100: Metabolic pathways","hypothetical protein DVH24_012011 [Malus domestica]","BGAL6_ARATH RecName: Full=Beta-galactosidase 6; Short=Lactase 6; EC=3.2.1.23; Flags: Precursor;","A0A498HS81_MALDO RecName: Full=Beta-galactosidase {ECO:0000256|ARBA:ARBA00012756}; EC=3.2.1.23 {ECO:0000256|ARBA:ARBA00012756};","Beta-galactosidase","GO:0048046,apoplast; GO:0009536,plastid; GO:0005773,vacuole; GO:0004565,beta-galactosidase activity; GO:0005975,carbohydrate metabolic process; GO:0048354,mucilage biosynthetic process involved in seed coat development; GO:0009827,plant-type cell wall modification; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0015925,galactosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009058,biosynthetic process; GO:0009791,post-embryonic development; GO:0009987,cellular process; GO:0010154,fruit development; GO:0010191,mucilage metabolic process; GO:0010192,mucilage biosynthetic process; GO:0010214,seed coat development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0048316,seed development; GO:0048359,mucilage metabolic process involved in seed coat development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0009664,plant-type cell wall organization; GO:0016043,cellular component organization; GO:0042545,cell wall modification; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01301.22:Glycosyl hydrolases family 35","--","--","--"]
["MS01G10860",65.7106,81.0696,70.4976,26.2192,15.9975,27.0201,23.7666,14.6507,23.7005,15.8225,18.645,17.8283,18.0572,18.5653,17.7777,3121,3838,3280,911,664,1078,857,494,1017,610,758,857,673,690,662,-1.870307143,"8.02891E-43","7.88247E-41","down",-1.705485868,"9.3074E-37","4.05476E-35","down",-1.444647742,"4.98815E-11","3.51995E-10","down",-1.527478372,"6.84955E-13","5.30386E-12","down",0.356017783,0.095973219,0.191501493,false,0.194145966,0.353661027,0.550821449,false,-0.083054114,0.752138567,0.938632988,false,0.441489032,0.039836139,0.116244703,false,0.28460257,0.175138462,0.445490144,false,"chr_001",10400092,10404823,"-","MS01G10860","--","K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] | (RefSeq) aldehyde dehydrogenase family 3 member H1 (A)","ko00010: Glycolysis / Gluconeogenesis; ko00053: Ascorbate and aldarate metabolism; ko00071: Fatty acid degradation; ko00280: Valine, leucine and isoleucine degradation; ko00310: Lysine degradation; ko00330: Arginine and proline metabolism; ko00340: Histidine metabolism; ko00380: Tryptophan metabolism; ko00410: beta-Alanine metabolism; ko00561: Glycerolipid metabolism; ko00620: Pyruvate metabolism; ko00770: Pantothenate and CoA biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01240: Biosynthesis of cofactors","aldehyde dehydrogenase family 3 member H1 [Malus domestica]","AL3I1_ARATH RecName: Full=Aldehyde dehydrogenase family 3 member I1, chloroplastic; Short=AtALDH3; Short=Ath-ALDH3; EC=1.2.1.3; Flags: Precursor;","A0A498HPU2_MALDO RecName: Full=Aldedh domain-containing protein {ECO:0000259|Pfam:PF00171};","Aldehyde dehydrogenase","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0005737,cytoplasm; GO:0005886,plasma membrane; GO:0009536,plastid; GO:0004028,3-chloroallyl aldehyde dehydrogenase activity; GO:0004029,aldehyde dehydrogenase (NAD+) activity; GO:0033721,aldehyde dehydrogenase (NADP+) activity; GO:0043878,glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity; GO:0006081,cellular aldehyde metabolic process; GO:0009737,response to abscisic acid; GO:0009414,response to water deprivation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016620,oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; GO:0016903,oxidoreductase activity, acting on the aldehyde or oxo group of donors; GO:0004030,aldehyde dehydrogenase [NAD(P)+] activity; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0044237,cellular metabolic process; GO:0071704,organic substance metabolic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0001101,response to acid chemical; GO:0006950,response to stress; GO:0009415,response to water; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0016020,membrane; GO:0071944,cell periphery","PF00171.25:Aldehyde dehydrogenase family","--","--","--"]
["MS01G10880",2.3657,2.6611,2.5613,1.5189,0.8203,2.1336,0.6138,0.9593,1.1109,1.5014,1.5075,2.1958,1.279,1.3284,0.9601,66,74,70,31,20,50,13,19,28,34,36,62,28,29,21,-0.350207621,0.238901773,0.329342521,false,-0.795308889,0.012193748,0.022703399,false,-0.564192195,0.135914929,0.19162937,false,-1.21422898,0.000631227,0.001517862,"down",-0.847689042,0.040059867,0.09631321,false,-0.404131299,0.355694995,0.552706362,false,-0.649677503,0.178672063,0.636817992,false,-0.193675085,0.652396601,0.795480534,false,0.25420465,0.566411378,0.800128456,false,"chr_001",10419473,10421648,"+","MS01G10880","--","--","--","hypothetical protein DVH24_012007 [Malus domestica]","--","A0A498HYZ6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74143.1};","--","--","--","--","--","--"]
["MS01G10910",35.556,46.0972,44.5767,13.3637,9.2395,14.6557,8.3461,5.8653,8.296,22.5713,31.5991,32.6276,15.9189,29.1047,16.949,982,1269,1206,270,223,340,175,115,207,506,747,912,345,629,367,-0.357515336,0.048942521,0.086693068,false,-0.735626849,0.002550764,0.00553659,false,-1.553081947,"1.09945E-13","1.03502E-12","down",-2.203492379,"9.35258E-29","2.16866E-27","down",-1.833579308,"2.74705E-17","1.15948E-15","down",-1.454274195,"2.04722E-07","4.43639E-06","down",-0.651742261,0.006744098,0.165458393,false,-1.179274765,"1.15439E-07","2.42201E-06","down",-0.793343423,0.005183833,0.04473396,false,"chr_001",10438800,10440182,"-","MS01G10910","--","--","--","uncharacterized protein LOC103431352 [Malus domestica]","--","A0A498HX68_MALDO RecName: Full=Rieske domain-containing protein {ECO:0000259|PROSITE:PS51296};","--","GO:0051537,2 iron, 2 sulfur cluster binding; GO:0046872,metal ion binding; GO:0008942,nitrite reductase [NAD(P)H] activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0051536,iron-sulfur cluster binding; GO:0051540,metal cluster binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016661,oxidoreductase activity, acting on other nitrogenous compounds as donors; GO:0046857,oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor; GO:0098809,nitrite reductase activity","PF13806.9:Rieske-like [2Fe-2S] domain","--","--","--"]
["MS01G10970",11.253,9.316,11.3514,3.2588,5.7803,3.4732,4.787,6.9979,4.5947,4.4774,3.7395,3.2944,3.4205,3.3874,3.5298,675,557,667,143,303,175,218,298,249,218,192,200,161,159,166,-1.282167288,"4.8277E-11","4.68056E-10","down",-1.333573408,"1.88705E-16","2.14789E-15","down",-1.122780484,"5.31337E-05",0.000157791,"down",-0.67489465,0.003050972,0.006470375,false,0.618473066,0.01900037,0.052305708,false,0.672565437,0.004395154,0.022122061,false,0.443800636,0.177901588,0.636267693,false,0.176353863,0.574089172,0.739677421,false,0.238862687,0.412545319,0.693190831,false,"chr_001",10489194,10495187,"+","MS01G10970","--","--","--","hypothetical protein DVH24_028874 [Malus domestica]","RLT1_ARATH RecName: Full=Homeobox-DDT domain protein RLT1 {ECO:0000305}; AltName: Full=Protein HOMEOBOX-1 {ECO:0000305}; AltName: Full=Protein RINGLET 1 {ECO:0000303|PubMed:22694359};","A0A498HZ06_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74153.1};","Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains)","GO:0031010,ISWI-type complex; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0009908,flower development; GO:0045892,negative regulation of DNA-templated transcription; GO:0048510,regulation of timing of transition from vegetative to reproductive phase; GO:0006357,regulation of transcription by RNA polymerase II; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009791,post-embryonic development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009888,tissue development; GO:0040034,regulation of development, heterochronic; GO:0048506,regulation of timing of meristematic phase transition; GO:0048507,meristem development; GO:0048509,regulation of meristem development; GO:0050793,regulation of developmental process; GO:0006366,transcription by RNA polymerase II; GO:0000785,chromatin; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005694,chromosome; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0070603,SWI/SNF superfamily-type complex; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:1902494,catalytic complex; GO:1904949,ATPase complex","PF10537.12:ATP-utilising chromatin assembly and remodelling N-terminal","DDT","TR","DDT"]
["MS01G10980",14.4448,19.019,23.569,29.5695,21.1739,32.8295,21.7624,12.5781,18.6312,28.4438,32.3568,33.735,32.83,36.9802,29.3872,605,794,967,906,775,1155,692,374,705,967,1160,1430,1079,1212,965,0.918105242,"1.7811E-06","8.8668E-06",false,1.095760903,"2.59844E-08","1.25903E-07","up",0.762238379,0.001055983,0.002464623,false,0.180249746,0.477818649,0.558330904,false,-0.726029252,0.000958952,0.004175991,false,-0.900835499,"6.05823E-05",0.000634919,false,-0.584120287,0.018867674,0.272405751,false,-0.139784953,0.440821325,0.627979397,false,-0.308923901,0.107370874,0.337848323,false,"chr_001",10497161,10501815,"+","MS01G10980","--","K18789 xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41] | (RefSeq) probable glycosyltransferase At5g20260 isoform X1 (A)","--","probable glycosyltransferase At5g03795 isoform X2 [Malus sylvestris]","GLYT3_ARATH RecName: Full=Probable glycosyltransferase At5g03795; EC=2.4.-.-;","A0A5N5GUI3_9ROSA SubName: Full=Glycosyltransferase {ECO:0000313|EMBL:KAB2618948.1};","Acetylglucosaminyltransferase EXT1/exostosin 1","GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0016757,glycosyltransferase activity; GO:0071555,cell wall organization; GO:0006486,protein glycosylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009100,glycoprotein metabolic process; GO:0009101,glycoprotein biosynthetic process; GO:0019538,protein metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043413,macromolecule glycosylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0070085,glycosylation; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF03016.18:Exostosin family","--","--","--"]
["MS01G10990",6.9836,8.052,8.14,10.33,10.019,15.0146,5.3201,2.1289,5.7686,6.1959,10.2899,9.269,8.9992,10.9226,8.2095,268,308,306,290,336,484,155,58,200,193,338,360,271,328,247,0.33290615,0.109409193,0.172035431,false,0.572745794,0.001233963,0.002850362,false,0.817623677,"5.14341E-05",0.000153186,false,-0.532143387,0.108830472,0.15888245,false,-0.851747412,0.019229706,0.052762406,false,-1.088356454,0.00123981,0.007907183,"down",-1.350836933,0.000134942,0.016967602,"down",0.500563637,0.040959914,0.118823614,false,0.269936971,0.211801833,0.493172313,false,"chr_001",10503680,10507295,"+","MS01G10990","--","K18789 xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41] | (RefSeq) probable glycosyltransferase At5g20260 isoform X1 (A)","--","probable glycosyltransferase At5g03795 [Malus domestica]","GLYT3_ARATH RecName: Full=Probable glycosyltransferase At5g03795; EC=2.4.-.-;","A0A498HV46_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74154.1};","Acetylglucosaminyltransferase EXT1/exostosin 1","GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0016757,glycosyltransferase activity; GO:0071555,cell wall organization; GO:0006486,protein glycosylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009100,glycoprotein metabolic process; GO:0009101,glycoprotein biosynthetic process; GO:0019538,protein metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043413,macromolecule glycosylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0070085,glycosylation; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF03016.18:Exostosin family","--","--","--"]
["MS01G11000",22.8362,22.752,20.4327,45.5908,32.2513,45.4269,36.113,26.4457,34.7178,26.4379,31.9519,31.839,27.0886,29.7023,31.8039,1012,1005,887,1478,1249,1691,1215,832,1390,951,1212,1428,942,1030,1105,0.633567868,"1.66997E-06","8.3422E-06",false,0.714127326,"6.62582E-08","3.05172E-07",false,1.108434874,"4.11259E-10","2.60246E-09","up",0.839344388,"8.52869E-07","3.24129E-06",false,0.218778428,0.192162792,0.324471038,false,0.140685601,0.396623427,0.592227923,false,-0.269956165,0.167853471,0.623649597,false,0.49131994,0.004471244,0.021087422,false,0.418240719,0.01393125,0.090623421,false,"chr_001",10507390,10521465,"-","MS01G11000","--","--","--","hypothetical protein DVH24_028876 [Malus domestica]","TOL5_ARATH RecName: Full=TOM1-like protein 5 {ECO:0000305};","A0A498HX49_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74155.1};","Cytosolic sorting protein GGA2/TOM1","GO:0016020,membrane; GO:0009536,plastid; GO:0035091,phosphatidylinositol binding; GO:0043130,ubiquitin binding; GO:0043328,protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; GO:0003674,molecular_function; GO:0005488,binding; GO:0005543,phospholipid binding; GO:0008289,lipid binding; GO:0005515,protein binding; GO:0032182,ubiquitin-like protein binding; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006810,transport; GO:0006886,intracellular protein transport; GO:0007034,vacuolar transport; GO:0008104,protein localization; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009987,cellular process; GO:0015031,protein transport; GO:0016192,vesicle-mediated transport; GO:0016197,endosomal transport; GO:0019538,protein metabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0032509,endosome transport via multivesicular body sorting pathway; GO:0032511,late endosome to vacuole transport via multivesicular body sorting pathway; GO:0033036,macromolecule localization; GO:0033365,protein localization to organelle; GO:0043162,ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; GO:0043170,macromolecule metabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0045184,establishment of protein localization; GO:0045324,late endosome to vacuole transport; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051603,proteolysis involved in protein catabolic process; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071704,organic substance metabolic process; GO:0071705,nitrogen compound transport; GO:0071985,multivesicular body sorting pathway; GO:0072594,establishment of protein localization to organelle; GO:0072665,protein localization to vacuole; GO:0072666,establishment of protein localization to vacuole; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00790.22:VHS domain","--","--","--"]
["MS01G11020",8.8959,9.8634,13.3181,39.9224,29.0011,37.1982,35.5556,25.3251,28.4853,34.1569,33.9014,48.6209,39.7322,44.604,36.2959,523,578,767,1717,1490,1837,1587,1057,1513,1630,1706,2893,1833,2052,1673,2.053198124,"1.43537E-21","3.92022E-20","up",2.207865639,"4.68244E-35","1.83672E-33","up",1.941253854,"2.30603E-21","4.36942E-20","up",1.767997189,"5.88125E-17","6.4421E-16","up",-0.273026102,0.206045558,0.341697129,false,-0.426222338,0.019702405,0.071523633,false,-0.176064649,0.373725072,0.792756291,false,-0.094032354,0.646905551,0.791470902,false,-0.242023313,0.151383771,0.410017831,false,"chr_001",10529873,10534173,"+","MS01G11020","--","--","--","hypothetical protein C1H46_012712 [Malus baccata]","FPP3_ARATH RecName: Full=Filament-like plant protein 3 {ECO:0000303|PubMed:11972898}; Short=AtFPP3 {ECO:0000303|PubMed:11972898}; AltName: Full=Protein VESICLE TETHERING 1 {ECO:0000303|PubMed:25541219};","A0A540MS97_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE01648.1};","--","GO:0031410,cytoplasmic vesicle; GO:0030674,protein-macromolecule adaptor activity; GO:0060178,regulation of exocyst localization; GO:0003674,molecular_function; GO:0060090,molecular adaptor activity; GO:0008150,biological_process; GO:0031503,protein-containing complex localization; GO:0032879,regulation of localization; GO:0050789,regulation of biological process; GO:0051179,localization; GO:0051601,exocyst localization; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity","PF05911.14:Filament-like plant protein, long coiled-coil","--","--","--"]
["MS01G11050",3.1633,2.9163,2.4146,1.305,1.4838,1.5776,1.1449,1.3046,1.1356,1.0182,1.1986,1.2953,1.3256,1.3111,1.4358,222,204,166,67,91,93,61,65,72,58,72,92,73,72,79,-1.08885693,"1.95672E-06","9.6581E-06","down",-0.77116911,0.00055488,0.001373574,false,-0.746697749,0.001280681,0.002944302,false,-0.966263922,"6.28936E-05",0.000180485,false,0.136594028,0.598513378,0.726088876,false,-0.179602376,0.47611917,0.662458937,false,-0.221252158,0.387471066,0.799938552,false,0.360318179,0.152102316,0.30906133,false,0.050245659,0.835097887,0.938807723,false,"chr_001",10546243,10550778,"-","MS01G11050","--","K15711 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27] | (RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 (A)","--","SWI/SNF-related matrix-associated actin-dependent regulated protein 1 [Pyrus ussuriensis x Pyrus communis]","SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Short=SMARCA3-like protein 1; EC=3.6.4.-;","A0A5N5GYH9_9ROSA SubName: Full=SWI/SNF-related matrix-associated actin-dependent regulated protein 1 {ECO:0000313|EMBL:KAB2618941.1};","Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily","GO:0005634,nucleus; GO:0005524,ATP binding; GO:0008094,ATP-dependent activity, acting on DNA; GO:0140658,ATP-dependent chromatin remodeler activity; GO:0004386,helicase activity; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0003676,nucleic acid binding; GO:0008270,zinc ion binding; GO:0006281,DNA repair; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0140657,ATP-dependent activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00176.26:SNF2-related domain","SNF2","TR","SNF2"]
["MS01G11090",0.5261,1.0767,1.1386,0.9493,1.5171,1.6034,1.4968,0.9189,0.9084,2.3333,2.6798,1.809,1.7968,1.748,3.1941,25,51,53,33,63,64,54,31,39,90,109,87,67,65,119,1.503434172,"1.64815E-05","6.81945E-05","up",1.591807858,"2.9193E-05","9.08421E-05","up",0.79122658,0.051601371,0.08214411,false,0.569013745,0.176521119,0.240894646,false,-0.92584974,0.005958605,0.019983488,false,-1.00966251,0.006586195,0.030508833,"down",-0.229789981,0.546448565,0.873101897,false,-0.693547897,0.032252527,0.099430114,false,-0.773293374,0.033077089,0.162743569,false,"chr_001",10630126,10635373,"+","MS01G11090","--","K03320 ammonium transporter, Amt family | (RefSeq) ammonium transporter 3 member 1-like (A)","--","hypothetical protein DVH24_028885 [Malus domestica]","AMT31_ORYSJ RecName: Full=Ammonium transporter 3 member 1; Short=OsAMT3;1;","A0A498HV57_MALDO RecName: Full=Ammonium transporter {ECO:0000256|RuleBase:RU362002};","Ammonia permease","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0008519,ammonium transmembrane transporter activity; GO:0072488,ammonium transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005216,ion channel activity; GO:0005261,cation channel activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015267,channel activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022803,passive transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0034220,ion transmembrane transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0071705,nitrogen compound transport; GO:0098655,cation transmembrane transport; GO:0098660,inorganic ion transmembrane transport; GO:0098662,inorganic cation transmembrane transport; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00909.24:Ammonium Transporter Family","--","--","--"]
["MS01G11100",6.6888,6.1391,6.8133,31.323,22.2935,31.1736,20.8331,11.7876,15.5992,12.4866,16.9085,16.2771,11.6878,14.9494,18.3668,458,419,457,1569,1334,1793,1083,573,965,694,991,1128,628,801,986,1.400067363,"1.21438E-20","3.07243E-19","up",1.485380604,"1.06267E-15","1.12988E-14","up",2.319562962,"9.88972E-41","6.01174E-39","up",1.580740997,"5.38025E-12","3.79565E-11","up",0.192308965,0.421658518,0.573202138,false,0.109240136,0.66518876,0.805485869,false,-0.741546367,0.002617797,0.098888196,false,0.935623549,"5.18197E-07","9.21683E-06",false,0.857719817,"5.97471E-05",0.001452693,false,"chr_001",10636333,10641517,"-","MS01G11100","--","K13418 somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) LOW QUALITY PROTEIN: somatic embryogenesis receptor kinase 2 (A)","--","probable LRR receptor-like serine/threonine-protein kinase At5g63710 [Malus sylvestris]","Y5371_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g63710; EC=2.7.11.1; Flags: Precursor;","A0A5N5GTJ2_9ROSA SubName: Full=LRR receptor-like serine/threonine-protein kinase {ECO:0000313|EMBL:KAB2618936.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G11110",45.759,40.9399,30.4317,76.0667,71.124,69.4994,72.5542,58.7875,54.7003,78.1242,51.4089,66.977,68.233,74.7527,78.5591,2763,2464,1800,3360,3753,3525,3326,2520,2984,3829,2657,4093,3233,3532,3719,0.938394534,"8.79717E-05",0.000318234,false,1.206377867,"5.91654E-11","3.92359E-10","up",1.099810811,"5.30062E-08","2.5065E-07","up",0.950587873,"1.5903E-05","5.02405E-05",false,0.026211373,0.908438668,0.944843122,false,-0.241988733,0.144388877,0.305222932,false,-0.152617152,0.39209002,0.802097506,false,0.180985329,0.390771912,0.580925445,false,-0.081646791,0.533545795,0.781486132,false,"chr_001",10642953,10651736,"-","MS01G11110","--","--","--","protein PSK SIMULATOR 1-like [Malus sylvestris]","PSI1_ARATH RecName: Full=Protein PSK SIMULATOR 1 {ECO:0000303|PubMed:25062973}; Short=AtPSI1 {ECO:0000303|PubMed:25062973};","A0A540MS86_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE01638.1};","--","GO:0005634,nucleus; GO:0045927,positive regulation of growth; GO:0006109,regulation of carbohydrate metabolic process; GO:0043434,response to peptide hormone; GO:0008150,biological_process; GO:0040007,growth; GO:0040008,regulation of growth; GO:0048518,positive regulation of biological process; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0019222,regulation of metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0010243,response to organonitrogen compound; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:1901652,response to peptide; GO:1901698,response to nitrogen compound; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF05003.15:Protein of unknown function (DUF668)","--","--","--"]
["MS01G11180",6.9433,8.2682,8.7829,3.7759,3.3163,5.9658,3.8769,1.5521,2.3891,5.5973,10.4218,7.7404,4.5395,6.6934,6.2185,460,546,570,183,192,332,195,73,143,301,591,519,236,347,323,0.163896386,0.467181014,0.566246919,false,-0.168135631,0.371907141,0.452953209,false,-0.672751997,0.005045703,0.010276056,false,-1.330004314,"2.09821E-05","6.49684E-05","down",-1.484341807,"2.78202E-05",0.000184943,"down",-1.148539249,0.000455009,0.003454447,"down",-0.660425379,0.069692368,0.461097325,false,-0.82284377,0.00451353,0.021248023,false,-0.480478387,0.064967004,0.249515786,false,"chr_001",10720877,10724922,"+","MS01G11180","--","K00521 ferric-chelate reductase [EC:1.16.1.7] | (RefSeq) ferric reduction oxidase 6-like isoform X1 (A)","--","ferric reduction oxidase 6-like isoform X1 [Malus domestica]","FRO7_ARATH RecName: Full=Ferric reduction oxidase 7, chloroplastic; Short=AtFRO7; EC=1.16.1.7; AltName: Full=Ferric-chelate reductase 7; Flags: Precursor;","A0A540KD99_MALBA RecName: Full=FAD-binding FR-type domain-containing protein {ECO:0000259|PROSITE:PS51384};","Ferric reductase, NADH/NADPH oxidase and related proteins","GO:0009507,chloroplast; GO:0031969,chloroplast membrane; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0009536,plastid; GO:0140618,ferric-chelate reductase (NADH) activity; GO:0000293,ferric-chelate reductase activity; GO:0046872,metal ion binding; GO:0006811,ion transport; GO:0009767,photosynthetic electron transport chain; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016722,oxidoreductase activity, acting on metal ions; GO:0016723,oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006810,transport; GO:0008150,biological_process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0006091,generation of precursor metabolites and energy; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0015979,photosynthesis; GO:0019684,photosynthesis, light reaction; GO:0022900,electron transport chain; GO:0044237,cellular metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery","PF08022.15:FAD-binding domain","--","--","--"]
["MS01G11200",31.7299,31.2567,32.2299,81.5838,63.4128,80.5587,71.9901,57.7047,75.1384,31.853,36.1636,35.2685,43.0347,43.1922,40.7275,2209,2169,2198,4155,3858,4711,3805,2852,4726,1800,2155,2485,2351,2353,2223,0.302694114,0.001684076,0.004506168,false,0.708007186,"1.33433E-11","9.48777E-11",false,1.455297892,"2.91941E-26","7.95244E-25","up",1.385963368,"9.41441E-24","1.63121E-22","up",1.0961707,"6.14153E-15","1.97349E-13","up",0.693529761,"1.43573E-06","2.50196E-05",false,-0.070433168,0.663149514,0.913498045,false,1.169189244,"2.26708E-17","2.60549E-15","up",0.771958409,"2.58694E-08","2.04162E-06",false,"chr_001",10730177,10741345,"+","MS01G11200","--","--","--","uncharacterized protein LOC126603419 [Malus sylvestris]","--","A0A540KDL1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD72210.1};","Uncharacterized conserved protein","GO:0016575,histone deacetylation; GO:0006476,protein deacetylation; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0016570,histone modification; GO:0019538,protein metabolic process; GO:0035601,protein deacylation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0098732,macromolecule deacylation; GO:1901564,organonitrogen compound metabolic process","PF08642.13:Histone deacetylation protein Rxt3","--","--","--"]
["MS01G11240",1.2958,1.9618,1.9361,0.467,0.4853,0.7853,0.6827,0.2489,0.5867,1.2191,1.2111,1.2687,0.9908,1.2495,0.9917,110,166,161,29,36,56,44,15,45,84,88,109,66,83,66,-0.300066998,0.218515775,0.305543657,false,-0.39014891,0.130866113,0.185337187,false,-1.367897464,"1.70546E-05","5.51621E-05","down",-1.486199045,"7.30284E-05",0.000207091,"down",-1.173113867,0.00162306,0.006604305,"down",-1.080397553,0.004770387,0.023602883,"down",-0.120285366,0.790154596,0.950138071,false,-1.049940663,0.000496312,0.003495983,"down",-0.951877622,0.002654527,0.027744407,false,"chr_001",10770438,10774544,"+","MS01G11240","--","--","--","hypothetical protein C1H46_042256 [Malus baccata]","PP368_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial; Flags: Precursor;","A0A540KDB0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD72217.1};","FOG: PPR repeat","GO:0005739,mitochondrion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13041.9:PPR repeat family","--","--","--"]
["MS01G11270",21.3185,23.2097,22.8548,26.3535,30.0595,35.5076,26.6058,20.1831,24.6706,37.358,38.0714,45.1516,30.6229,39.4192,37.9157,857,930,900,775,1056,1199,812,576,896,1219,1310,1837,966,1240,1195,1.026798964,"1.4166E-14","2.02918E-13","up",0.970565639,"2.87677E-12","2.19563E-11",false,0.66009962,"1.55605E-05","5.07429E-05",false,0.367882717,0.018839797,0.033672812,false,-0.645692986,"9.97234E-05",0.000573198,false,-0.587861487,0.000643069,0.004600737,false,-0.295174182,0.105342754,0.538655714,false,-0.348390926,0.03448817,0.104394934,false,-0.285037382,0.099597156,0.324132202,false,"chr_001",10780677,10784076,"+","MS01G11270","--","K11153 retinol dehydrogenase 12 [EC:1.1.1.300] | (RefSeq) short-chain dehydrogenase TIC 32, chloroplastic-like (A)","ko01100: Metabolic pathways; ko01240: Biosynthesis of cofactors","hypothetical protein DVH24_028902 [Malus domestica]","TIC32_ARATH RecName: Full=Short-chain dehydrogenase TIC 32, chloroplastic {ECO:0000303|PubMed:15180984}; EC=1.1.1.-; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 32 {ECO:0000303|PubMed:15180984}; Short=AtTIC32 {ECO:0000303|PubMed:15180984};","A0A498HYC6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74181.1};","Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009706,chloroplast inner membrane; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0016491,oxidoreductase activity; GO:0015031,protein transport; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0006810,transport; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009528,plastid inner membrane; GO:0016020,membrane; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031969,chloroplast membrane; GO:0042170,plastid membrane; GO:0071944,cell periphery","PF00106.28:short chain dehydrogenase","--","--","--"]
["MS01G11310",10.9866,10.4761,16.3493,58.4975,72.6101,54.911,58.6449,63.2117,31.4477,81.5672,65.3007,101.498,70.2905,58.5352,105.12,343,326,500,1336,1981,1440,1390,1401,887,2067,1745,3207,1722,1430,2573,2.910315217,"1.90331E-34","1.22805E-32","up",2.924727342,"3.15548E-31","9.90472E-30","up",2.524977699,"6.16989E-27","1.75025E-25","up",2.321843872,"2.87922E-14","2.54325E-13","up",-0.577600342,0.060003418,0.132457033,false,-0.591386684,0.058408056,0.160700549,false,-0.210637279,0.4942521,0.852942845,false,-0.364891112,0.119798885,0.262321115,false,-0.373204487,0.151028453,0.40948906,false,"chr_001",10815440,10817129,"-","MS01G11310","--","--","--","uncharacterized protein LOC126605290, partial [Malus sylvestris]","--","A0A498HX80_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74185.1};","--","GO:0005737,cytoplasm; GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0046622,positive regulation of organ growth; GO:0009725,response to hormone; GO:0008150,biological_process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0035265,organ growth; GO:0040007,growth; GO:0040008,regulation of growth; GO:0045927,positive regulation of growth; GO:0046620,regulation of organ growth; GO:0048518,positive regulation of biological process; GO:0048589,developmental growth; GO:0048638,regulation of developmental growth; GO:0048639,positive regulation of developmental growth; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051094,positive regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0051240,positive regulation of multicellular organismal process; GO:0065007,biological regulation; GO:0009719,response to endogenous stimulus; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","--","--","--","--"]
["MS01G11330",203.8394,228.4581,200.8641,99.2469,96.1521,99.8886,92.649,80.0555,81.6826,74.3267,78.3027,89.2571,75.3376,86.7109,83.4497,10082,11263,9732,3591,4156,4150,3479,2811,3650,2984,3315,4468,2924,3356,3236,-1.202832139,"1.39193E-20","3.4977E-19","down",-1.076319628,"3.85779E-19","5.45725E-18","down",-0.88642675,"9.37028E-13","8.0041E-12",false,-1.031461204,"6.23481E-13","4.85057E-12","down",0.184195929,0.190250134,0.322045486,false,0.059399786,0.659298647,0.801650839,false,-0.147968719,0.273252003,0.722428327,false,0.334451943,0.007364675,0.031599311,false,0.215331231,0.068617203,0.258739393,false,"chr_001",10827190,10829651,"-","MS01G11330","--","--","--","hypothetical protein C1H46_042648 [Malus baccata]","LEA14_SOYBN RecName: Full=Desiccation protectant protein Lea14 homolog;","A0A540KC66_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD71815.1};","--","GO:0009269,response to desiccation; GO:0001101,response to acid chemical; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009414,response to water deprivation; GO:0009415,response to water; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:1901700,response to oxygen-containing compound","PF03168.16:Late embryogenesis abundant protein","--","--","--"]
["MS01G11410",2.1608,2.35,1.9278,0.422,0.7065,0.6917,0.5501,0.6906,0.7235,0.8948,1.1667,1.3456,1.319,0.7657,0.9727,119,129,104,17,34,32,23,27,36,40,55,75,57,33,42,-0.730358629,0.004785973,0.011460196,false,-0.780202904,0.007675466,0.014979202,false,-1.59990355,"4.23592E-07","1.75971E-06","down",-1.432135393,"9.76837E-07","3.69027E-06","down",-0.68583825,0.043824195,0.103403113,false,-0.635685912,0.089469127,0.21827375,false,0.167586738,0.679786884,0.91686217,false,-0.849749019,0.022771728,0.076067434,false,-0.795616302,0.04789176,0.20571266,false,"chr_001",10855965,10858319,"-","MS01G11410","--","--","--","hypothetical protein DVH24_028911 [Malus domestica]","--","A0A498HTV7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74190.1};","--","--","--","--","--","--"]
["MS01G11440",255.3348,261.1616,159.6866,75.7525,78.3645,91.3173,80.2743,68.0849,77.975,66.8084,76.1109,75.6551,77.7232,82.3784,75.0528,5589,5698,3424,1213,1499,1679,1334,1058,1542,1187,1426,1676,1335,1411,1288,-1.449174343,"2.63491E-11","2.64215E-10","down",-1.236616307,"6.37905E-09","3.34193E-08","down",-1.255227686,"5.81647E-08","2.73393E-07","down",-1.302041043,"9.64986E-09","4.75776E-08","down",0.160635619,0.208608286,0.344940158,false,-0.049677944,0.708795096,0.834694527,false,-0.048662469,0.73006598,0.932220421,false,0.211516398,0.095499819,0.223233973,false,0.007090494,0.956727168,0.986369797,false,"chr_001",10870281,10872535,"+","MS01G11440","--","K15191 La-related protein 7 | (RefSeq) la-related protein 6B (A)","--","hypothetical protein C1H46_044544, partial [Malus baccata]","LRP6B_ARATH RecName: Full=La-related protein 6B; Short=AtLARP6b; AltName: Full=VirF-interacting protein FIP1;","A0A540K6T1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD69919.1}; Flags: Fragment;","Predicted RNA-binding protein","GO:0005634,nucleus; GO:0005844,polysome; GO:0003729,mRNA binding; GO:0003723,RNA binding; GO:0006396,RNA processing; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:1990904,ribonucleoprotein complex","PF00076.25:RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","--","--","--"]
["MS01G11490",0.8299,0.6573,1.1482,0.4478,0.6248,0.338,0.5609,0.523,0.423,0.296,0.2296,0.3345,0.3618,0.1954,0.2368,76,60,103,30,50,26,39,34,35,22,18,31,26,14,17,-1.418116012,"9.81083E-05",0.000351716,"down",-1.430011415,0.000261626,0.000688494,"down",-0.669413183,0.082647787,0.124148822,false,-0.519379021,0.125906346,0.180273067,false,0.911792493,0.019025801,0.052348596,false,0.926350812,0.028054307,0.093897781,false,0.145577236,0.718876292,0.92877308,false,0.769608949,0.083812977,0.203159336,false,0.788478374,0.093747125,0.312580633,false,"chr_001",10891380,10896568,"+","MS01G11490","--","K24221 type I inositol polyphosphate 5-phosphatase IP5P1/2 [EC:3.1.3.56] | (RefSeq) type I inositol polyphosphate 5-phosphatase 2 isoform X1 (A)","ko00562: Inositol phosphate metabolism; ko01100: Metabolic pathways","type I inositol polyphosphate 5-phosphatase 12-like isoform X2 [Malus domestica]","IP5PC_ARATH RecName: Full=Type I inositol polyphosphate 5-phosphatase 12 {ECO:0000303|PubMed:15574849}; Short=At5PTase12 {ECO:0000303|PubMed:15574849}; EC=3.1.3.56 {ECO:0000269|PubMed:15574849};","A0A5N5H0M9_9ROSA SubName: Full=Type I inositol 1,4,5-trisphosphate 5-phosphatase 12-like {ECO:0000313|EMBL:KAB2618920.1};","Inositol polyphosphate 5-phosphatase and related proteins","GO:0052659,inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity; GO:0052658,inositol-1,4,5-trisphosphate 5-phosphatase activity; GO:0004445,inositol-polyphosphate 5-phosphatase activity; GO:0046872,metal ion binding; GO:0004439,phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; GO:0046855,inositol phosphate dephosphorylation; GO:0046856,phosphatidylinositol dephosphorylation; GO:0009846,pollen germination; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0052743,inositol tetrakisphosphate phosphatase activity; GO:0052745,inositol phosphate phosphatase activity; GO:0046030,inositol trisphosphate phosphatase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0034593,phosphatidylinositol bisphosphate phosphatase activity; GO:0034595,phosphatidylinositol phosphate 5-phosphatase activity; GO:0052866,phosphatidylinositol phosphate phosphatase activity; GO:0106019,phosphatidylinositol-4,5-bisphosphate phosphatase activity; GO:0005975,carbohydrate metabolic process; GO:0006066,alcohol metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009987,cellular process; GO:0016311,dephosphorylation; GO:0019637,organophosphate metabolic process; GO:0019751,polyol metabolic process; GO:0043647,inositol phosphate metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044281,small molecule metabolic process; GO:0044282,small molecule catabolic process; GO:0046164,alcohol catabolic process; GO:0046174,polyol catabolic process; GO:0046434,organophosphate catabolic process; GO:0046838,phosphorylated carbohydrate dephosphorylation; GO:0071545,inositol phosphate catabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901616,organic hydroxy compound catabolic process; GO:0006629,lipid metabolic process; GO:0006644,phospholipid metabolic process; GO:0006650,glycerophospholipid metabolic process; GO:0030258,lipid modification; GO:0044255,cellular lipid metabolic process; GO:0046486,glycerolipid metabolic process; GO:0046488,phosphatidylinositol metabolic process; GO:0046839,phospholipid dephosphorylation; GO:0000003,reproduction; GO:0009856,pollination; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0044706,multi-multicellular organism process","PF03372.26:Endonuclease/Exonuclease/phosphatase family","--","--","--"]
["MS01G11520",1.0964,1.9412,2.0411,1.4988,1.1071,1.3053,0.5947,0.9994,1.1422,2.2249,2.2605,3.1864,1.8082,1.8133,1.563,17,30,31,17,15,17,7,11,16,28,30,50,22,22,19,0.789442339,0.052567349,0.092217134,false,0.326818024,0.450109567,0.531200507,false,-0.164499812,0.728418795,0.781669408,false,-0.604827666,0.2535241,0.328356202,false,-1.37760625,0.003697195,0.01334297,"down",-0.913546162,0.070122163,0.183376547,false,"NA","NA","NA","NA",-0.936583392,0.027941616,0.089031165,false,-0.466384699,0.295573812,0.587965761,false,"chr_001",10944490,10947810,"-","MS01G11520","--","K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] | (RefSeq) triosephosphate isomerase, cytosolic (A)","ko00010: Glycolysis / Gluconeogenesis; ko00051: Fructose and mannose metabolism; ko00562: Inositol phosphate metabolism; ko00710: Carbon fixation in photosynthetic organisms; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01200: Carbon metabolism; ko01230: Biosynthesis of amino acids","hypothetical protein DVH24_023090 [Malus domestica]","TPIS_MAIZE RecName: Full=Triosephosphate isomerase, cytosolic; Short=TIM; Short=Triose-phosphate isomerase; EC=5.3.1.1;","A0A498KN55_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI08946.1};","Triosephosphate isomerase","GO:0005829,cytosol; GO:0004807,triose-phosphate isomerase activity; GO:0006094,gluconeogenesis; GO:0046166,glyceraldehyde-3-phosphate biosynthetic process; GO:0019563,glycerol catabolic process; GO:0006096,glycolytic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016853,isomerase activity; GO:0016860,intramolecular oxidoreductase activity; GO:0016861,intramolecular oxidoreductase activity, interconverting aldoses and ketoses; GO:0005975,carbohydrate metabolic process; GO:0005996,monosaccharide metabolic process; GO:0006006,glucose metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0016051,carbohydrate biosynthetic process; GO:0019318,hexose metabolic process; GO:0019319,hexose biosynthetic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046364,monosaccharide biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0006081,cellular aldehyde metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0009987,cellular process; GO:0019637,organophosphate metabolic process; GO:0019682,glyceraldehyde-3-phosphate metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0046184,aldehyde biosynthetic process; GO:0090407,organophosphate biosynthetic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:0006066,alcohol metabolic process; GO:0006071,glycerol metabolic process; GO:0009056,catabolic process; GO:0016052,carbohydrate catabolic process; GO:0019400,alditol metabolic process; GO:0019405,alditol catabolic process; GO:0019751,polyol metabolic process; GO:0044248,cellular catabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044275,cellular carbohydrate catabolic process; GO:0044282,small molecule catabolic process; GO:0046164,alcohol catabolic process; GO:0046174,polyol catabolic process; GO:1901575,organic substance catabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901616,organic hydroxy compound catabolic process; GO:0006082,organic acid metabolic process; GO:0006090,pyruvate metabolic process; GO:0006091,generation of precursor metabolites and energy; GO:0006139,nucleobase-containing compound metabolic process; GO:0006163,purine nucleotide metabolic process; GO:0006165,nucleoside diphosphate phosphorylation; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006757,ATP generation from ADP; GO:0006807,nitrogen compound metabolic process; GO:0009117,nucleotide metabolic process; GO:0009132,nucleoside diphosphate metabolic process; GO:0009135,purine nucleoside diphosphate metabolic process; GO:0009141,nucleoside triphosphate metabolic process; GO:0009144,purine nucleoside triphosphate metabolic process; GO:0009150,purine ribonucleotide metabolic process; GO:0009179,purine ribonucleoside diphosphate metabolic process; GO:0009185,ribonucleoside diphosphate metabolic process; GO:0009199,ribonucleoside triphosphate metabolic process; GO:0009205,purine ribonucleoside triphosphate metabolic process; GO:0009259,ribonucleotide metabolic process; GO:0016310,phosphorylation; GO:0019693,ribose phosphate metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043436,oxoacid metabolic process; GO:0046031,ADP metabolic process; GO:0046034,ATP metabolic process; GO:0046483,heterocycle metabolic process; GO:0046939,nucleotide phosphorylation; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0072521,purine-containing compound metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF00121.21:Triosephosphate isomerase","--","--","--"]
["MS01G11540",13.9298,14.9502,20.0626,7.3805,5.9312,4.4994,11.9476,7.6053,12.0718,9.8445,8.074,9.0691,7.7062,12.8336,6.4734,129,138,182,50,48,35,84,50,101,74,64,85,56,93,47,-0.666413337,0.007434346,0.016894215,false,-0.562600883,0.066873054,0.102994545,false,-1.239715314,"4.72633E-05",0.000141728,"down",-0.342549125,0.208133959,0.277331718,false,0.336240108,0.244092658,0.387617176,false,0.233364698,0.502787331,0.684894751,false,0.892018766,0.008850739,0.191673452,false,-0.555515071,0.088834504,0.21192916,false,-0.649283239,0.089571601,0.304183489,false,"chr_001",10973178,10973573,"+","MS01G11540","--","--","--","F-box/LRR-repeat/kelch-repeat protein At1g09650-like [Malus domestica]","FBK67_ARATH RecName: Full=F-box/kelch-repeat protein At3g23880;","A0A540KFJ6_MALBA RecName: Full=F-box domain-containing protein {ECO:0000259|PROSITE:PS50181};","--","GO:0005634,nucleus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00646.36:F-box domain","--","--","--"]
["MS01G11560",17.1728,13.5613,15.7674,28.0325,19.3522,19.5594,18.8101,15.5041,14.784,37.7603,23.4889,28.2204,20.8862,33.3423,34.3286,855,673,769,1021,842,818,711,548,665,1526,1001,1422,816,1299,1340,1.141340341,"7.21498E-07","3.82645E-06","up",1.216645216,"6.975E-09","3.63544E-08","up",0.741499765,0.000578644,0.00142348,false,0.364605121,0.047957728,0.07747298,false,-0.763084844,0.001666419,0.006744984,false,-0.838595786,0.000209204,0.001804648,false,-0.379065197,0.090722094,0.511860916,false,-0.381233295,0.149666211,0.305762844,false,-0.451603806,0.072476846,0.267534055,false,"chr_001",11021473,11023839,"+","MS01G11560","--","--","--","hypothetical protein DVH24_028923 [Malus domestica]","FBK67_ARATH RecName: Full=F-box/kelch-repeat protein At3g23880;","A0A498HW22_MALDO RecName: Full=F-box domain-containing protein {ECO:0000259|PROSITE:PS50181};","--","GO:0005634,nucleus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00646.36:F-box domain","--","--","--"]
["MS01G11590",0.1296,0.0975,0.0661,1.4171,1.4087,0.5399,1.1094,0.5476,0.9323,1.0776,0.6434,1.5044,0.7844,0.3312,0.4958,4,3,2,32,38,14,26,12,26,27,17,47,19,8,12,3.651755034,"1.96961E-07","1.14575E-06","up","NA","NA","NA","NA",3.745844539,"4.71296E-07","1.94513E-06","up",3.422141189,"1.46074E-06","5.38233E-06","up",-0.214306202,0.669288292,0.781028807,false,0.687226284,0.210360482,0.394424123,false,-0.327526487,0.545840317,0.872635665,false,0.116136887,0.833531064,0.910019078,false,1.021112008,0.083710467,0.29192457,false,"chr_001",11051978,11055091,"-","MS01G11590","--","K19825 2-alkenal reductase (NADP+) [EC:1.3.1.102] | (RefSeq) 2-alkenal reductase (NADP(+)-dependent)-like (A)","--","hypothetical protein C1H46_025960 [Malus baccata]","DBR_TOBAC RecName: Full=2-alkenal reductase (NADP(+)-dependent); EC=1.3.1.102 {ECO:0000269|PubMed:17945329, ECO:0000269|Ref.3, ECO:0000269|Ref.4}; AltName: Full=Alkenal double bound reductase; AltName: Full=Allylic alcohol dehydrogenase 1 {ECO:0000303|PubMed:11117876}; Short=allyl-ADH1 {ECO:0000303|PubMed:11117876}; AltName: Full=Flavin-free double bond reductase {ECO:0000303|Ref.4}; Short=NtDBR; AltName: Full=Pulegone reductase {ECO:0000303|Ref.3}; Short=NtRed-1;","A0A540LPX2_MALBA RecName: Full=PKS_ER domain-containing protein {ECO:0000259|SMART:SM00829};","Predicted NAD-dependent oxidoreductase","GO:0032440,2-alkenal reductase [NAD(P)+] activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0016628,oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","PF16884.8:N-terminal domain of oxidoreductase","--","--","--"]
["MS01G11600",9.7841,2.8088,3.8508,128.2677,180.0472,47.7846,199.8721,172.9389,96.6847,67.676,39.9043,61.6152,111.7287,46.0974,73.9373,332,95,128,3184,5339,1362,5149,4166,2964,1864,1159,2116,2975,1224,1967,3.553320679,"4.35354E-17","7.99575E-16","up",4.108611241,"3.46022E-10","2.12175E-09","up",4.670033074,"8.70352E-10","5.29175E-09","up",5.124957091,"7.06278E-15","6.58263E-14","up",1.584330326,"1.14103E-06","1.04623E-05","up",1.028179671,0.003976872,0.020391323,"up",0.445288693,0.337882756,0.77107522,false,1.139710023,0.010339666,0.041320395,"up",0.589955709,0.372534892,0.658289057,false,"chr_001",11069841,11071407,"+","MS01G11600","--","K19825 2-alkenal reductase (NADP+) [EC:1.3.1.102] | (RefSeq) 2-alkenal reductase (NADP(+)-dependent)-like (A)","--","2-alkenal reductase (NADP(+)-dependent)-like [Malus domestica]","DBR_TOBAC RecName: Full=2-alkenal reductase (NADP(+)-dependent); EC=1.3.1.102 {ECO:0000269|PubMed:17945329, ECO:0000269|Ref.3, ECO:0000269|Ref.4}; AltName: Full=Alkenal double bound reductase; AltName: Full=Allylic alcohol dehydrogenase 1 {ECO:0000303|PubMed:11117876}; Short=allyl-ADH1 {ECO:0000303|PubMed:11117876}; AltName: Full=Flavin-free double bond reductase {ECO:0000303|Ref.4}; Short=NtDBR; AltName: Full=Pulegone reductase {ECO:0000303|Ref.3}; Short=NtRed-1;","A0A540LPW8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD88541.1};","Predicted NAD-dependent oxidoreductase","GO:0032440,2-alkenal reductase [NAD(P)+] activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0016628,oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","PF00107.29:Zinc-binding dehydrogenase","--","--","--"]
["MS01G11630",27.9293,27.2371,29.7511,35.9259,38.742,48.0847,38.4636,31.2369,27.1698,73.2338,78.7368,77.6178,61.1256,57.6393,71.3206,966,939,1008,909,1171,1397,1010,767,849,2056,2331,2717,1659,1560,1934,1.621763114,"2.53844E-58","5.2457E-56","up",1.455059518,"2.97158E-28","7.88602E-27","up",0.74301998,"5.2077E-07","2.13677E-06",false,0.479119689,0.010409876,0.019737034,false,-1.131464386,"4.3235E-10","7.43422E-09","down",-0.962397603,"4.64244E-07","9.22255E-06",false,-0.267652187,0.192762106,0.650062866,false,-0.861531122,"2.21667E-09","6.79533E-08",false,-0.686696237,"3.22567E-05",0.000886117,false,"chr_001",11134230,11138053,"-","MS01G11630","--","K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] | (RefSeq) acetolactate synthase small subunit 2, chloroplastic-like (A)","ko00290: Valine, leucine and isoleucine biosynthesis; ko00650: Butanoate metabolism; ko00660: C5-Branched dibasic acid metabolism; ko00770: Pantothenate and CoA biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01210: 2-Oxocarboxylic acid metabolism; ko01230: Biosynthesis of amino acids","hypothetical protein DVH24_028930 [Malus domestica]","ILVH2_ARATH RecName: Full=Acetolactate synthase small subunit 2, chloroplastic; AltName: Full=Acetohydroxy-acid synthase small subunit; Short=AHAS; Short=ALS; Flags: Precursor;","A0A498HU11_MALDO RecName: Full=Acetohydroxy-acid synthase small subunit {ECO:0000256|ARBA:ARBA00031510};","Acetolactate synthase, small subunit","GO:0009507,chloroplast; GO:0005829,cytosol; GO:0005777,peroxisome; GO:0003984,acetolactate synthase activity; GO:1990610,acetolactate synthase regulator activity; GO:0043621,protein self-association; GO:0009097,isoleucine biosynthetic process; GO:0050790,regulation of catalytic activity; GO:0001666,response to hypoxia; GO:0009099,valine biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016744,transketolase or transaldolase activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0005488,binding; GO:0005515,protein binding; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006549,isoleucine metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009058,biosynthetic process; GO:0009081,branched-chain amino acid metabolic process; GO:0009082,branched-chain amino acid biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901605,alpha-amino acid metabolic process; GO:1901607,alpha-amino acid biosynthetic process; GO:0065007,biological regulation; GO:0065009,regulation of molecular function; GO:0006950,response to stress; GO:0009628,response to abiotic stimulus; GO:0036293,response to decreased oxygen levels; GO:0050896,response to stimulus; GO:0070482,response to oxygen levels; GO:0006573,valine metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0042579,microbody","PF10369.12:Small subunit of acetolactate synthase","--","--","--"]
["MS01G11650",49.295,45.492,42.0572,94.0896,83.7807,110.0317,64.8731,31.0954,38.7539,121.2204,131.6655,151.74,117.092,182.9964,127.6325,2271,2089,1898,3171,3373,4258,2269,1017,1613,4533,5192,7075,4233,6597,4610,1.747925125,"3.02592E-35","2.06989E-33","up",1.932241115,"7.53607E-24","1.47217E-22","up",1.281125994,"7.51636E-18","1.04912E-16","up",0.263372745,0.339082418,0.420285891,false,-1.472969043,"1.14899E-07","1.30397E-06","down",-1.656524304,"1.53341E-08","4.25617E-07","down",-1.022319035,0.000286206,0.028804433,"down",-0.449339171,0.001918862,0.010661719,false,-0.62670844,0.002144805,0.023741892,false,"chr_001",11146084,11150219,"+","MS01G11650","--","K04424 sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25] | (RefSeq) serine/threonine-protein kinase EDR1 (A)","--","integrin-linked protein kinase 1-like isoform X1 [Malus domestica]","ILK1_ARATH RecName: Full=Integrin-linked protein kinase 1 {ECO:0000303|PubMed:27208244}; EC=2.7.11.1 {ECO:0000269|PubMed:27208244}; AltName: Full=Ankyrin protein kinase 1 {ECO:0000303|PubMed:12650621};","A0A540LQ64_MALBA RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs","GO:0009898,cytoplasmic side of plasma membrane; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005524,ATP binding; GO:0004672,protein kinase activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004712,protein serine/threonine/tyrosine kinase activity; GO:0045087,innate immune response; GO:0046777,protein autophosphorylation; GO:0006970,response to osmotic stress; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0002376,immune system process; GO:0006950,response to stress; GO:0006952,defense response; GO:0006955,immune response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0005886,plasma membrane; GO:0016020,membrane; GO:0071944,cell periphery; GO:0098552,side of membrane; GO:0098562,cytoplasmic side of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["MS01G11660",4.1889,4.9029,6.5924,0.7158,0.699,0.8831,0.9196,2.0897,2.0285,1.2902,1.5803,1.2503,0.5561,0.5019,0.8348,96,112,148,12,14,17,16,34,42,24,31,29,10,9,15,-1.74254353,"1.70233E-08","1.16881E-07","down",-2.754703852,"6.43426E-13","5.27181E-12","down",-2.553041087,"2.36337E-12","1.92653E-11","down",-1.353161091,0.000202009,0.000530009,"down",0.40079666,0.362617365,0.515887233,false,1.418254266,0.006590204,0.030522293,"up",1.200771849,0.015026684,0.246799192,false,-0.795886891,0.07368352,0.184681388,false,"NA","NA","NA","NA","chr_001",11152054,11154236,"+","MS01G11660","--","K02974 small subunit ribosomal protein S24e | (RefSeq) 40S ribosomal protein S24-1-like (A)","ko03010: Ribosome","Ribosomal protein S24e family protein [Prunus dulcis]","RS241_ARATH RecName: Full=40S ribosomal protein S24-1;","A0A4Y1RW79_PRUDU RecName: Full=40S ribosomal protein S24 {ECO:0000256|RuleBase:RU004383};","40S ribosomal protein S24","GO:0009507,chloroplast; GO:0005829,cytosol; GO:0022626,cytosolic ribosome; GO:0022627,cytosolic small ribosomal subunit; GO:0005730,nucleolus; GO:0000325,plant-type vacuole; GO:0042788,polysomal ribosome; GO:0003729,mRNA binding; GO:0003735,structural constituent of ribosome; GO:0006412,translation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005840,ribosome; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0015935,small ribosomal subunit; GO:0032991,protein-containing complex; GO:0044391,ribosomal subunit; GO:1990904,ribonucleoprotein complex; GO:0005634,nucleus; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0005773,vacuole; GO:0005844,polysome","PF01282.22:Ribosomal protein S24e","--","--","--"]
["MS01G11680",1.9302,2.0606,2.4251,1.184,0.7079,1.1195,1.0756,0.5577,0.4383,1.25,2.3129,0.8802,0.883,1.1068,1.231,78,83,96,35,25,38,33,16,16,41,80,36,28,35,39,-0.355317616,0.342237417,0.441674291,false,-0.701478961,0.015290327,0.027845761,false,-0.886075649,0.00496773,0.010135544,false,-1.346473776,0.000788558,0.001866912,"down",-0.980742302,0.062787345,0.137459525,false,-0.630021732,0.169432607,0.339859997,false,-0.463208577,0.338861467,0.771758735,false,-0.517859219,0.25781379,0.441996284,false,-0.159595664,0.666467174,0.858337382,false,"chr_001",11163612,11166269,"-","MS01G11680","--","K13691 pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 74F2-like (A)","--","hypothetical protein DVH24_028933 [Malus domestica]","U74F2_ARATH RecName: Full=UDP-glycosyltransferase 74F2; EC=2.4.1.-; AltName: Full=AtSGT1; AltName: Full=Salicylic acid glucosyltransferase 1;","A0A498HW31_MALDO RecName: Full=Glycosyltransferase {ECO:0000256|RuleBase:RU362057}; EC=2.4.1.- {ECO:0000256|RuleBase:RU362057};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0005829,cytosol; GO:0052641,benzoic acid glucosyltransferase activity; GO:0090704,nicotinate-O-glucosyltransferase activity; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity; GO:0052639,salicylic acid glucosyltransferase (ester-forming) activity; GO:0052640,salicylic acid glucosyltransferase (glucoside-forming) activity; GO:0080002,UDP-glucose:4-aminobenzoate acylglucosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0018874,benzoate metabolic process; GO:0046482,para-aminobenzoic acid metabolic process; GO:0010030,positive regulation of seed germination; GO:0009696,salicylic acid metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0006082,organic acid metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042537,benzene-containing compound metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009072,aromatic amino acid family metabolic process; GO:0044238,primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009845,seed germination; GO:0010029,regulation of seed germination; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048518,positive regulation of biological process; GO:0048580,regulation of post-embryonic development; GO:0048582,positive regulation of post-embryonic development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051094,positive regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0051240,positive regulation of multicellular organismal process; GO:0065007,biological regulation; GO:0090351,seedling development; GO:1900140,regulation of seedling development; GO:2000026,regulation of multicellular organismal development; GO:0018958,phenol-containing compound metabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF00201.21:UDP-glucoronosyl and UDP-glucosyl transferase","--","--","--"]
["MS01G11690",29.1141,33.6988,43.0502,60.9411,49.7481,68.2957,53.5713,29.6493,38.2677,70.585,66.5625,63.8507,67.9994,81.0113,62.2883,1184,1366,1715,1813,1768,2333,1654,856,1406,2330,2317,2628,2170,2578,1986,1.117779179,"1.00709E-10","9.39113E-10","up",1.293340485,"6.05178E-13","4.97638E-12","up",0.970396603,"3.36985E-07","1.42012E-06",false,0.488187627,0.051301814,0.082179032,false,-0.618580368,0.008751128,0.027581914,false,-0.791847709,0.000873646,0.00590821,false,-0.486093863,0.04647345,0.390279319,false,-0.130695641,0.396032916,0.585805138,false,-0.297980083,0.07812346,0.280060278,false,"chr_001",11188940,11191069,"-","MS01G11690","--","K13691 pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 74F2-like (A)","--","hypothetical protein DVH24_028937 [Malus domestica]","U74F2_ARATH RecName: Full=UDP-glycosyltransferase 74F2; EC=2.4.1.-; AltName: Full=AtSGT1; AltName: Full=Salicylic acid glucosyltransferase 1;","A0A498HRZ7_MALDO RecName: Full=Glycosyltransferase {ECO:0000256|RuleBase:RU362057}; EC=2.4.1.- {ECO:0000256|RuleBase:RU362057};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0005829,cytosol; GO:0052641,benzoic acid glucosyltransferase activity; GO:0090704,nicotinate-O-glucosyltransferase activity; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity; GO:0052639,salicylic acid glucosyltransferase (ester-forming) activity; GO:0052640,salicylic acid glucosyltransferase (glucoside-forming) activity; GO:0080002,UDP-glucose:4-aminobenzoate acylglucosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0018874,benzoate metabolic process; GO:0046482,para-aminobenzoic acid metabolic process; GO:0010030,positive regulation of seed germination; GO:0009696,salicylic acid metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0006082,organic acid metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042537,benzene-containing compound metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009072,aromatic amino acid family metabolic process; GO:0044238,primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009845,seed germination; GO:0010029,regulation of seed germination; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048518,positive regulation of biological process; GO:0048580,regulation of post-embryonic development; GO:0048582,positive regulation of post-embryonic development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051094,positive regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0051240,positive regulation of multicellular organismal process; GO:0065007,biological regulation; GO:0090351,seedling development; GO:1900140,regulation of seedling development; GO:2000026,regulation of multicellular organismal development; GO:0018958,phenol-containing compound metabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF00201.21:UDP-glucoronosyl and UDP-glucosyl transferase","--","--","--"]
["MS01G11700",19.1571,15.7874,20.216,34.5007,30.1857,30.7253,29.3388,20.6669,17.9648,55.1163,45.0286,54.0441,55.1232,58.3382,43.1968,504,414,521,664,694,679,586,386,427,1177,1014,1439,1138,1201,891,1.675335403,"6.18499E-22","1.74401E-20","up",1.800783932,"5.58769E-24","1.10323E-22","up",1.006905738,"1.42353E-09","8.40297E-09","up",0.592289364,0.013194425,0.02443412,false,-1.071569638,"7.48611E-06","5.72719E-05","down",-1.196140918,"5.56173E-07","1.08464E-05","down",-0.419838086,0.076129962,0.480182942,false,-0.650013871,0.000147604,0.001263584,false,-0.768288121,"2.11473E-05",0.000626242,false,"chr_001",11197063,11198542,"+","MS01G11700","--","K04498 E1A/CREB-binding protein [EC:2.3.1.48] | (RefSeq) LOW QUALITY PROTEIN: histone acetyltransferase HAC1-like (A)","ko03083: Polycomb repressive complex; ko03250: Viral life cycle - HIV-1","BTB/POZ and TAZ domain-containing protein 3-like isoform X3 [Malus sylvestris]","BT3_ARATH RecName: Full=BTB/POZ and TAZ domain-containing protein 3; AltName: Full=BTB and TAZ domain protein 3;","A0A498HXD0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74217.1};","CREB binding protein/P300 and related TAZ Zn-finger proteins","GO:0005516,calmodulin binding; GO:0046872,metal ion binding; GO:0016567,protein ubiquitination; GO:0006355,regulation of DNA-templated transcription; GO:0009409,response to cold; GO:0009723,response to ethylene; GO:0042542,response to hydrogen peroxide; GO:0009751,response to salicylic acid; GO:0009651,response to salt stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0000302,response to reactive oxygen species; GO:0006979,response to oxidative stress; GO:0010035,response to inorganic substance; GO:1901700,response to oxygen-containing compound; GO:0014070,response to organic cyclic compound; GO:0006970,response to osmotic stress","PF02135.19:TAZ zinc finger","TAZ","TR","TAZ"]
["MS01G11720",0.9726,0.4374,0.7875,0,0.1151,0.0399,0,0,0.0742,0.2066,0.431,0.2982,0.2564,0.0857,0.2994,29,13,23,0,3,1,0,0,2,5,11,9,6,2,7,-1.051137308,0.077697041,0.128765928,false,-1.482391815,0.030631638,0.051627201,false,-3.539680649,0.000346431,0.000887485,"down",-4.459166456,0.000315079,0.000799749,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",11202279,11205053,"+","MS01G11720","--","K17361 acyl-coenzyme A thioesterase 9 [EC:3.1.2.-] | (RefSeq) acyl-coenzyme A thioesterase 9, mitochondrial-like (A)","--","hypothetical protein DVH24_028940 [Malus domestica]","TE4_HUMLU RecName: Full=Acyl-coenzyme A thioesterase 4, mitochondrial {ECO:0000303|PubMed:23300257}; Short=Acyl-CoA thioesterase 4 {ECO:0000303|PubMed:23300257}; Short=HlTE4 {ECO:0000303|PubMed:23300257}; EC=3.1.2.- {ECO:0000269|PubMed:23300257}; AltName: Full=2-methylbutanoyl-CoA hydrolase TE4 {ECO:0000305|PubMed:23300257}; EC=3.1.2.- {ECO:0000269|PubMed:23300257}; AltName: Full=2-methylpropanoyl-CoA hydrolase TE4 {ECO:0000305|PubMed:23300257}; EC=3.1.2.- {ECO:0000269|PubMed:23300257}; AltName: Full=3-methylbutanoyl-CoA hydrolase TE4 {ECO:0000305|PubMed:23300257}; EC=3.1.2.- {ECO:0000269|PubMed:23300257}; AltName: Full=Acyl-CoA thioester hydrolase 4 {ECO:0000303|PubMed:23300257}; AltName: Full=Butanoyl-CoA hydrolase TE4 {ECO:0000305|PubMed:23300257}; EC=3.1.2.- {ECO:0000269|PubMed:23300257}; AltName: Full=Propanoyl-CoA hydrolase TE4 {ECO:0000305|PubMed:23300257}; EC=3.1.2.- {ECO:0000269|PubMed:23300257}; Flags: Precursor;","A0A498HU21_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74219.1};","Acyl-CoA thioesterase","GO:0005739,mitochondrion; GO:0016787,hydrolase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03061.25:Thioesterase superfamily","--","--","--"]
["MS01G11730",8.5326,7.5381,8.1966,0.9398,1.3065,1.8708,0.8894,1.1587,0.9105,3.2822,4.0018,3.6635,2.1591,1.7572,2.3646,695,612,654,56,93,128,55,67,67,217,279,302,138,112,151,-0.963955689,"1.55454E-11","1.59397E-10",false,-1.657406121,"4.364E-21","7.05911E-20","down",-2.347647521,"1.71334E-21","3.27768E-20","down",-2.75825698,"7.57971E-43","3.58307E-41","down",-1.780357067,"6.7917E-16","2.41761E-14","down",-1.082765372,"2.39994E-05",0.000288623,"down",-0.405341464,0.216155914,0.674060328,false,-1.367158215,"3.22006E-07","6.08575E-06","down",-0.666088204,0.023760206,0.130490466,false,"chr_001",11205205,11209824,"-","MS01G11730","--","--","--","hypothetical protein DVH24_028941 [Malus domestica]","FH1_ARATH RecName: Full=Formin-like protein 1; Short=AtFH1; Short=AtFORMIN-8; Flags: Precursor;","A0A498HTY2_MALDO RecName: Full=Formin-like protein {ECO:0000256|RuleBase:RU361260};","Rho GTPase effector BNI1 and related formins","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0005886,plasma membrane; GO:0003779,actin binding; GO:0051015,actin filament binding; GO:0030036,actin cytoskeleton organization; GO:0045010,actin nucleation; GO:0051016,barbed-end actin filament capping; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0044877,protein-containing complex binding; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0030029,actin filament-based process; GO:0071840,cellular component organization or biogenesis; GO:0007015,actin filament organization; GO:0097435,supramolecular fiber organization; GO:0008064,regulation of actin polymerization or depolymerization; GO:0008154,actin polymerization or depolymerization; GO:0010639,negative regulation of organelle organization; GO:0022411,cellular component disassembly; GO:0022607,cellular component assembly; GO:0030041,actin filament polymerization; GO:0030042,actin filament depolymerization; GO:0030832,regulation of actin filament length; GO:0030833,regulation of actin filament polymerization; GO:0030834,regulation of actin filament depolymerization; GO:0030835,negative regulation of actin filament depolymerization; GO:0030837,negative regulation of actin filament polymerization; GO:0031333,negative regulation of protein-containing complex assembly; GO:0032271,regulation of protein polymerization; GO:0032272,negative regulation of protein polymerization; GO:0032535,regulation of cellular component size; GO:0032956,regulation of actin cytoskeleton organization; GO:0032970,regulation of actin filament-based process; GO:0032984,protein-containing complex disassembly; GO:0033043,regulation of organelle organization; GO:0043242,negative regulation of protein-containing complex disassembly; GO:0043244,regulation of protein-containing complex disassembly; GO:0043254,regulation of protein-containing complex assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0044087,regulation of cellular component biogenesis; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051128,regulation of cellular component organization; GO:0051129,negative regulation of cellular component organization; GO:0051258,protein polymerization; GO:0051261,protein depolymerization; GO:0051493,regulation of cytoskeleton organization; GO:0051494,negative regulation of cytoskeleton organization; GO:0051693,actin filament capping; GO:0065003,protein-containing complex assembly; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0090066,regulation of anatomical structure size; GO:0110053,regulation of actin filament organization; GO:1901879,regulation of protein depolymerization; GO:1901880,negative regulation of protein depolymerization; GO:1902903,regulation of supramolecular fiber organization; GO:1902904,negative regulation of supramolecular fiber organization; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF02181.26:Formin Homology 2 Domain","--","--","--"]
["MS01G11760",5.8033,6.8437,6.1322,1.1134,1.8641,3.7574,1.7434,1.721,1.3523,5.519,8.2074,6.9413,2.7247,3.6431,2.8569,57,67,59,8,16,31,13,12,12,44,69,69,21,28,22,0.321059477,0.245039992,0.336204699,false,-0.734283971,0.027047989,0.046246972,false,-1.268689316,0.005299629,0.010739149,"down",-1.688800015,"2.0591E-05","6.38173E-05","down",-1.996442597,"6.78598E-07","6.51005E-06","down",-0.9366085,0.046968924,0.137236937,false,"NA","NA","NA","NA",-1.572709335,0.000735037,0.00485244,"down",-0.511459118,0.330410507,0.621817937,false,"chr_001",11231634,11232322,"-","MS01G11760","--","--","--","hypothetical protein C1H46_025950 [Malus baccata]","--","A0A540LPW3_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD88530.1};","--","--","--","--","--","--"]
["MS01G11800",91.4662,112.1654,134.7147,29.215,26.8484,34.4728,24.3504,18.2283,23.197,58.7476,69.5776,66.1169,40.9307,47.4486,44.2502,5294,6471,7638,1237,1358,1676,1070,749,1213,2760,3447,3873,1859,2149,2008,-0.611554081,0.000152309,0.00052525,false,-1.055936845,"4.33305E-11","2.92071E-10","down",-1.68837872,"3.71951E-21","6.93299E-20","down",-2.076882759,"2.74047E-28","6.21409E-27","down",-1.453430754,"4.76241E-21","3.00625E-19","down",-1.005941691,"1.82099E-10","7.64678E-09","down",-0.390969735,0.019818512,0.27741893,false,-1.060292629,"6.60233E-16","6.14493E-14","down",-0.607091447,"7.40928E-06",0.000262997,false,"chr_001",11251412,11256676,"+","MS01G11800","--","--","--","uncharacterized protein LOC126602308 [Malus sylvestris]","CAS_ARATH RecName: Full=Calcium sensing receptor, chloroplastic; AltName: Full=Sulfurtransferase 3; Short=AtStr3; Flags: Precursor;","A0A540LPW2_MALBA RecName: Full=Rhodanese domain-containing protein {ECO:0000259|PROSITE:PS50206};","--","GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0005739,mitochondrion; GO:0009536,plastid; GO:0009579,thylakoid; GO:0071277,cellular response to calcium ion; GO:0009704,de-etiolation; GO:0090333,regulation of stomatal closure; GO:0008150,biological_process; GO:0009987,cellular process; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051592,response to calcium ion; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071241,cellular response to inorganic substance; GO:0071248,cellular response to metal ion; GO:0007275,multicellular organism development; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009639,response to red or far red light; GO:0009640,photomorphogenesis; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0010118,stomatal movement; GO:0010119,regulation of stomatal movement; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0090332,stomatal closure; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0009526,plastid envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane; GO:0031224,intrinsic component of membrane","PF00581.23:Rhodanese-like domain","--","--","--"]
["MS01G11840",1.8068,2.0606,1.7814,0.5489,0.7952,0.5515,0.7323,0.5438,0.7863,0.5517,0.5773,0.8087,0.3346,0.3355,0.3152,117,133,113,26,45,30,36,25,46,29,32,53,17,17,16,-1.349705722,"1.04857E-06","5.41434E-06","down",-2.227682642,"1.62219E-12","1.27061E-11","down",-1.350771492,"7.04347E-06","2.42849E-05","down",-1.168208779,"2.73662E-05","8.31692E-05","down",0.196456363,0.585454325,0.715625266,false,1.073189452,0.007629099,0.034440466,"up",0.176764569,0.641946951,0.905907022,false,0.022128164,0.954808043,0.977500574,false,0.903413956,0.034078709,0.165951099,false,"chr_001",11273908,11288403,"-","MS01G11840","--","K10908 DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6] | (RefSeq) DNA-directed RNA polymerase 3, chloroplastic (A)","--","hypothetical protein DVH24_028948 [Malus domestica]","RPO3A_TOBAC RecName: Full=DNA-directed RNA polymerase 3A, chloroplastic; EC=2.7.7.6; AltName: Full=NictaRpoT3-syl; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 3A; Flags: Precursor;","A0A498HXE0_MALDO RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418}; EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};","Mitochondrial/chloroplast DNA-directed RNA polymerase RPO41, provides primers for DNA replication-initiation","GO:0009507,chloroplast; GO:0034245,mitochondrial DNA-directed RNA polymerase complex; GO:0003677,DNA binding; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0006390,mitochondrial transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034062,5'-3' RNA polymerase activity; GO:0097747,RNA polymerase activity; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0000959,mitochondrial RNA metabolic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:0140053,mitochondrial gene expression; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0000428,DNA-directed RNA polymerase complex; GO:0005739,mitochondrion; GO:0030880,RNA polymerase complex; GO:0032991,protein-containing complex; GO:0061695,transferase complex, transferring phosphorus-containing groups; GO:0098798,mitochondrial protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF00940.22:DNA-dependent RNA polymerase","--","--","--"]
["MS01G11860",0.6487,0.1898,0.0828,0.7944,0.4485,0.9332,0.4806,0.6663,0.8676,0.2498,0.1421,0.1469,0.2067,0.1209,0.0345,48,14,6,43,29,58,27,35,58,15,9,11,12,7,2,"NA","NA","NA","NA","NA","NA","NA","NA",1.427528131,0.037903897,0.062593861,false,1.390213365,0.035682346,0.059570696,false,2.015390727,"2.31768E-05",0.00015788,"up",2.473204146,"2.17852E-05",0.000266399,"up",-0.028923687,0.941928719,0.985407497,false,2.048145249,"3.27694E-05",0.00034713,"up",2.513948873,"2.47675E-05",0.000708469,"up","chr_001",11291476,11294736,"+","MS01G11860","--","K13420 LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase FLS2 (A)","ko04016: MAPK signaling pathway - plant; ko04626: Plant-pathogen interaction","putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 [Malus sylvestris]","Y2241_ARATH RecName: Full=Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130; EC=2.7.11.1; Flags: Precursor;","A0A498HU31_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G11920",2.1033,1.4771,1.7342,1.5924,1.6107,2.2535,0.5541,0.2963,0.6089,1.754,1.9847,2.2061,3.237,3.5356,3.0542,130,91,105,72,87,117,26,13,34,88,105,138,157,171,148,0.347925696,0.143765967,0.216449128,false,1.178086445,"7.46644E-08","3.41335E-07","up",0.247186879,0.351798149,0.431664662,false,-1.576355957,"6.81276E-06","2.27807E-05","down",-1.907908117,"6.8393E-09","9.67034E-08","down",-2.73398314,"4.71541E-20","9.12514E-18","down",-1.82366716,"2.07567E-07",0.000143097,"down",-0.082877061,0.735738649,0.851076325,false,-0.90488929,"5.86689E-05",0.001432761,false,"chr_001",11354503,11367119,"-","MS01G11920","--","K10999 cellulose synthase A [EC:2.4.1.12] | (RefSeq) LOW QUALITY PROTEIN: cellulose synthase A catalytic subunit 7 [UDP-forming]-like (A)","--","hypothetical protein DVH24_028955 [Malus domestica]","CESA9_ORYSI RecName: Full=Cellulose synthase A catalytic subunit 9 [UDP-forming]; EC=2.4.1.12; AltName: Full=OsCesA9;","A0A498HVC8_MALDO RecName: Full=Cellulose synthase {ECO:0000256|RuleBase:RU361116}; EC=2.4.1.12 {ECO:0000256|RuleBase:RU361116};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0016760,cellulose synthase (UDP-forming) activity; GO:0046872,metal ion binding; GO:0071555,cell wall organization; GO:0030244,cellulose biosynthetic process; GO:0009834,plant-type secondary cell wall biogenesis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0016759,cellulose synthase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0016051,carbohydrate biosynthetic process; GO:0030243,cellulose metabolic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0009832,plant-type cell wall biogenesis; GO:0042546,cell wall biogenesis; GO:0044085,cellular component biogenesis; GO:0071669,plant-type cell wall organization or biogenesis; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF03552.17:Cellulose synthase","--","--","--"]
["MS01G11930",1.0038,1.5106,2.8692,2.3327,1.4932,3.2863,2.1155,1.4139,2.0555,3.339,4.1632,4.0664,2.1107,1.9883,2.7527,20,30,56,34,26,55,32,20,37,54,71,82,33,31,43,1.296946231,0.001181679,0.003289976,"up",0.64939426,0.139247164,0.195723968,false,0.611714989,0.214291047,0.283645431,false,0.347086755,0.459924061,0.541333313,false,-0.936841596,0.00332201,0.012193437,false,-0.285375182,0.438737083,0.629364315,false,-0.265431348,0.517193413,0.862466398,false,-0.669567864,0.056293989,0.150998531,false,-0.012962733,0.973476062,0.99230691,false,"chr_001",11369222,11372206,"-","MS01G11930","--","K02520 translation initiation factor IF-3 | (RefSeq) LOW QUALITY PROTEIN: translation initiation factor IF3-2, chloroplastic-like (A)","--","LOW QUALITY PROTEIN: translation initiation factor IF3-2, chloroplastic-like [Malus domestica]","IF32_ARATH RecName: Full=Translation initiation factor IF3-2, chloroplastic {ECO:0000305}; Short=AtIF3-2 {ECO:0000303|PubMed:25630975}; AltName: Full=AtINFC-2 {ECO:0000303|PubMed:25630975}; AltName: Full=Protein SUPPRESSOR OF VARIEGATION 9 {ECO:0000303|PubMed:27535792}; Flags: Precursor;","A0A5N5H6X3_9ROSA RecName: Full=Translation initiation factor IF-3 {ECO:0000256|RuleBase:RU000646};","--","GO:0009507,chloroplast; GO:0005773,vacuole; GO:0003729,mRNA binding; GO:0043022,ribosome binding; GO:0003743,translation initiation factor activity; GO:0009658,chloroplast organization; GO:0048366,leaf development; GO:0032790,ribosome disassembly; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043021,ribonucleoprotein complex binding; GO:0044877,protein-containing complex binding; GO:0008135,translation factor activity, RNA binding; GO:0045182,translation regulator activity; GO:0090079,translation regulator activity, nucleic acid binding; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:0022411,cellular component disassembly; GO:1903008,organelle disassembly; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF05198.19:Translation initiation factor IF-3, N-terminal domain","--","--","--"]
["MS01G11960",1.3474,1.7075,1.4478,1.8418,1.2984,1.4352,1.3077,0.1998,1.0204,1.4852,3.7282,3.4334,0.9941,1.3594,2.0804,19,24,20,19,16,17,14,2,13,17,45,49,11,15,23,1.120277587,0.01297145,0.027570978,"up",0.266153343,0.580295807,0.6539564,false,0.230939683,0.612626277,0.680498966,false,"NA","NA","NA","NA",-1.648704354,0.011245054,0.03388427,"down","NA","NA","NA","NA","NA","NA","NA","NA",-0.871527211,0.074884253,0.186812486,false,-0.009901622,0.984427796,0.99530803,false,"chr_001",11398340,11399374,"+","MS01G11960","--","--","--","uncharacterized protein LOC126605217 [Malus sylvestris]","--","A0A540LQ33_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD88508.1};","--","--","--","--","--","--"]
["MS01G11990",0.6516,1.0623,2.6607,2.5608,2.6097,1.5515,3.5404,2.4094,3.1554,1.2041,2.1886,2.8168,2.6987,1.5613,1.87,8,13,32,23,28,16,33,21,35,12,23,35,26,15,18,0.701328436,0.259198322,0.351775954,false,0.797376417,0.181187404,0.245571967,false,0.85652296,0.165650436,0.227198227,false,1.355357951,0.014196278,0.026104163,"up",0.658754896,0.141985308,0.258176587,false,0.574638349,0.182352187,0.357432503,false,0.497112094,0.250638836,0.705052483,false,0.168251887,0.740710002,0.854089867,false,0.085342905,0.859590341,0.948263659,false,"chr_001",11426994,11427891,"-","MS01G11990","--","--","--","F-box protein SKIP1 [Pyrus ussuriensis x Pyrus communis]","SKIP1_ARATH RecName: Full=F-box protein SKIP1; AltName: Full=SKP1-interacting partner 1;","A0A5N5GL86_9ROSA SubName: Full=F-box protein SKIP1 {ECO:0000313|EMBL:KAB2614352.1};","Leucine rich repeat proteins, some proteins contain F-box","GO:0005634,nucleus; GO:0019005,SCF ubiquitin ligase complex; GO:0016567,protein ubiquitination; GO:0031146,SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009987,cellular process; GO:0010498,proteasomal protein catabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0000151,ubiquitin ligase complex; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0032991,protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF13516.9:Leucine Rich repeat","--","--","--"]
["MS01G12020",41.5427,35.6304,16.0615,3.183,2.8388,3.2384,3.2103,2.6055,4.0707,2.0912,3.6356,2.0857,2.274,2.3082,1.8042,1909,1632,723,107,114,125,112,85,169,78,143,97,82,83,65,-3.40839521,"1.01265E-20","2.58418E-19","down",-3.583343595,"1.28495E-26","3.07566E-25","down",-3.127696924,"2.33418E-19","3.73393E-18","down",-2.96886787,"1.31747E-17","1.51448E-16","down",0.453950543,0.136094583,0.250155476,false,0.634567268,0.015224116,0.058660115,false,0.162861004,0.494546676,0.853097656,false,0.295436269,0.306161053,0.496429646,false,0.480515677,0.040317024,0.184574716,false,"chr_001",11432163,11435288,"+","MS01G12020","--","--","--","hypothetical protein DVH24_028965 [Malus domestica]","--","A0A498HVD7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74244.1};","--","GO:0003676,nucleic acid binding; GO:0008270,zinc ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding","PF12874.10:Zinc-finger of C2H2 type","--","--","--"]
["MS01G12050",2.9058,2.9153,1.8111,0.1254,0.035,0.1821,0,0.0431,0.0677,1.5073,2.2513,1.3902,0.8576,0.4691,0.6632,95,95,58,3,1,5,0,1,2,40,63,46,22,12,17,-0.393733879,0.242657202,0.333585921,false,-1.649063071,"3.31736E-05",0.000102025,"down",-4.290931211,"6.46059E-12","5.02704E-11","down",-5.776595006,"4.05011E-10","2.35564E-09","down",-5.371119341,"1.19169E-08","1.61812E-07","down","NA","NA","NA","NA","NA","NA","NA","NA",-3.88379644,"2.45473E-09","7.46065E-08","down","NA","NA","NA","NA","chr_001",11451484,11456671,"-","MS01G12050","--","K16297 serine carboxypeptidase-like clade II [EC:3.4.16.-] | (RefSeq) serine carboxypeptidase 24 isoform X1 (A)","--","serine carboxypeptidase 24 isoform X1 [Malus domestica]","SCP24_ARATH RecName: Full=Serine carboxypeptidase 24; EC=3.4.16.6; AltName: Full=Bri1 suppressor 1; AltName: Full=Carboxypeptidase D; AltName: Full=Serine carboxypeptidase II; Contains: RecName: Full=Serine carboxypeptidase 24 chain A; AltName: Full=Serine carboxypeptidase II chain A; Contains: RecName: Full=Serine carboxypeptidase 24 chain B; AltName: Full=Serine carboxypeptidase II chain B; Flags: Precursor;","A0A5N5GFS3_9ROSA RecName: Full=Carboxypeptidase {ECO:0000256|RuleBase:RU361156}; EC=3.4.16.- {ECO:0000256|RuleBase:RU361156};","Serine carboxypeptidases (lysosomal cathepsin A)","GO:0005615,extracellular space; GO:0004185,serine-type carboxypeptidase activity; GO:0009742,brassinosteroid mediated signaling pathway; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004180,carboxypeptidase activity; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0008238,exopeptidase activity; GO:0016787,hydrolase activity; GO:0017171,serine hydrolase activity; GO:0070008,serine-type exopeptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009741,response to brassinosteroid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0014070,response to organic cyclic compound; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0043401,steroid hormone mediated signaling pathway; GO:0048545,response to steroid hormone; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071367,cellular response to brassinosteroid stimulus; GO:0071383,cellular response to steroid hormone stimulus; GO:0071396,cellular response to lipid; GO:0071407,cellular response to organic cyclic compound; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF00450.25:Serine carboxypeptidase","--","--","--"]
["MS01G12130",39.1627,40.5154,41.8241,70.9858,63.4664,70.0215,68.0998,61.9083,70.42,52.26,56.9397,58.5018,59.5777,61.1808,61.9563,2405,2480,2516,3189,3406,3612,3175,2699,3907,2605,2993,3636,2871,2940,2983,0.651258817,"1.46361E-11","1.50543E-10",false,0.881326237,"3.21104E-20","4.90659E-19",false,0.9650324,"5.61883E-19","8.71226E-18",false,1.00492545,"3.78204E-20","5.18267E-19","up",0.366526659,0.000747505,0.003369347,false,0.138938388,0.208323808,0.391826597,false,0.038011904,0.745849168,0.936832403,false,0.331076399,0.002755988,0.014310183,false,0.108940016,0.31720952,0.608808577,false,"chr_001",11497217,11502109,"+","MS01G12130","--","K05391 cyclic nucleotide gated channel, plant | (RefSeq) probable cyclic nucleotide-gated ion channel 5 (A)","ko04626: Plant-pathogen interaction","hypothetical protein DVH24_028971 [Malus domestica]","CNGC5_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 5; Short=AtCNGC5; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 5;","A0A498HU10_MALDO RecName: Full=Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042};","K+-channel ERG and related proteins, contain PAS/PAC sensor domain","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0035618,root hair; GO:0005262,calcium channel activity; GO:0005516,calmodulin binding; GO:0030552,cAMP binding; GO:0030553,cGMP binding; GO:0005223,intracellular cGMP-activated cation channel activity; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005216,ion channel activity; GO:0005261,cation channel activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015085,calcium ion transmembrane transporter activity; GO:0015267,channel activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022803,passive transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0046873,metal ion transmembrane transporter activity; GO:0005488,binding; GO:0005515,protein binding; GO:0000166,nucleotide binding; GO:0017076,purine nucleotide binding; GO:0030551,cyclic nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0019001,guanyl nucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0005217,intracellular ligand-gated ion channel activity; GO:0005221,intracellular cyclic nucleotide activated cation channel activity; GO:0015276,ligand-gated ion channel activity; GO:0022834,ligand-gated channel activity; GO:0022836,gated channel activity; GO:0043855,cyclic nucleotide-gated ion channel activity; GO:0099094,ligand-gated cation channel activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery; GO:0042995,cell projection; GO:0120025,plasma membrane bounded cell projection","PF00520.34:Ion transport protein","--","--","--"]
["MS01G12180",234.6974,288.3276,299.7366,446.0662,430.2414,534.0423,436.444,327.5329,423.385,403.8023,471.7352,530.5211,448.716,494.597,451.4488,5505,6741,6887,7654,8819,10522,7772,5454,8972,7688,9471,12594,8259,9078,8302,0.958693215,"1.90046E-10","1.70753E-09",false,1.055501181,"8.21547E-16","8.80799E-15","up",0.989850939,"2.20398E-11","1.62165E-10",false,0.812595954,"1.13577E-06","4.25396E-06",false,-0.133488068,0.424244498,0.575670642,false,-0.227691803,0.134965822,0.291448241,false,-0.179694221,0.26542974,0.717526764,false,0.048535361,0.737252746,0.852274108,false,-0.040125619,0.746687214,0.897913204,false,"chr_001",11543360,11545644,"-","MS01G12180","--","K03263 translation initiation factor 5A | (RefSeq) eukaryotic translation initiation factor 5A-2-like (A)","--","eukaryotic translation initiation factor 5A-2-like [Malus domestica]","IF5A2_NICPL RecName: Full=Eukaryotic translation initiation factor 5A-2; Short=eIF-5A-2; AltName: Full=eIF-4D;","A0A540LQA3_MALBA RecName: Full=Eukaryotic translation initiation factor 5A {ECO:0000256|RuleBase:RU362005}; Short=eIF-5A {ECO:0000256|RuleBase:RU362005};","Translation initiation factor 5A (eIF-5A)","GO:0043022,ribosome binding; GO:0003723,RNA binding; GO:0003746,translation elongation factor activity; GO:0003743,translation initiation factor activity; GO:0045901,positive regulation of translational elongation; GO:0045905,positive regulation of translational termination; GO:0003674,molecular_function; GO:0005488,binding; GO:0043021,ribonucleoprotein complex binding; GO:0044877,protein-containing complex binding; GO:0003676,nucleic acid binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0008135,translation factor activity, RNA binding; GO:0045182,translation regulator activity; GO:0090079,translation regulator activity, nucleic acid binding; GO:0006412,translation; GO:0006414,translational elongation; GO:0006417,regulation of translation; GO:0006448,regulation of translational elongation; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0010608,post-transcriptional regulation of gene expression; GO:0010628,positive regulation of gene expression; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0034248,regulation of cellular amide metabolic process; GO:0034250,positive regulation of cellular amide metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045727,positive regulation of translation; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051247,positive regulation of protein metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:2000112,regulation of cellular macromolecule biosynthetic process; GO:0006415,translational termination; GO:0006449,regulation of translational termination; GO:0016043,cellular component organization; GO:0022411,cellular component disassembly; GO:0032984,protein-containing complex disassembly; GO:0043243,positive regulation of protein-containing complex disassembly; GO:0043244,regulation of protein-containing complex disassembly; GO:0043933,protein-containing complex organization; GO:0051128,regulation of cellular component organization; GO:0051130,positive regulation of cellular component organization; GO:0071840,cellular component organization or biogenesis","PF01287.23:Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold","--","--","--"]
["MS01G12190",3.5613,2.8453,2.6308,0.6196,0.3408,0.5704,0.2559,0.6202,0.5734,0.7658,1.0893,0.6526,0.5776,0.4303,0.5616,275,219,199,35,23,37,15,34,40,48,72,51,35,26,34,-1.674147279,"4.28609E-10","3.68569E-09","down",-2.235054054,"1.98408E-16","2.25573E-15","down",-2.362943805,"3.73093E-15","4.07068E-14","down",-2.363004855,"1.21163E-12","9.13943E-12","down",-0.678139866,0.111313253,0.213964288,false,-0.111246221,0.797966068,0.888652059,false,"7.8368E-05",0.999865307,0.999903682,false,-0.674619559,0.079001282,0.194502116,false,-0.102846336,0.790991077,0.919582697,false,"chr_001",11551566,11554975,"-","MS01G12190","--","K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) systemin receptor SR160 (A)","ko04075: Plant hormone signal transduction","probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Malus domestica]","Y2242_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At2g24230; EC=2.7.11.1; Flags: Precursor;","A0A498HRT6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74258.1};","--","GO:0016021,integral component of membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G12220",96.9191,85.9216,104.6846,3.7509,6.3715,4.1966,5.0916,6.0939,4.1678,23.5894,29.1089,29.8233,13.6553,17.1746,15.3789,4839,4276,5120,137,278,176,193,216,188,956,1244,1507,535,671,602,-1.615912263,"9.82306E-33","5.6475E-31","down",-2.34532426,"1.57107E-63","1.90183E-61","down",-4.100527493,"4.06681E-64","6.80529E-62","down",-3.940336209,"1.17804E-90","2.89643E-88","down",-2.312241105,"2.06947E-29","2.50151E-27","down",-1.581092194,"3.8433E-14","3.01291E-12","down",0.157339271,0.608023224,0.894602665,false,-2.465253193,"4.50876E-22","9.92173E-20","down",-1.727595861,"2.62954E-11","5.11744E-09","down","chr_001",11572053,11575619,"-","MS01G12220","--","K10255 acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] | (RefSeq) omega-6 fatty acid desaturase, chloroplastic (A)","--","omega-6 fatty acid desaturase, chloroplastic [Malus domestica]","FAD6C_BRANA RecName: Full=Omega-6 fatty acid desaturase, chloroplastic {ECO:0000303|PubMed:8066133}; EC=1.14.19.23 {ECO:0000269|PubMed:8066133}; Flags: Precursor;","A0A5N5GT55_9ROSA SubName: Full=Omega-6 fatty acid desaturase {ECO:0000313|EMBL:KAB2618785.1};","--","GO:0031969,chloroplast membrane; GO:0102873,1-18:1-2-16:0-digalactosyldiacylglycerol desaturase activity; GO:0102834,1-18:1-2-16:0-monogalactosyldiacylglycerol acyl-lipid omega-6 desaturase activity; GO:0102850,1-18:1-2-16:0-phosphatidylglycerol omega-6 desaturase activity; GO:0102836,1-18:1-2-16:1-monogalactosyldiacylglyceroldesaturase activity; GO:0102838,1-18:1-2-16:2-monogalactosyldiacylglycerol desaturase activity; GO:0102841,1-18:1-2-16:2-monogalactosyldiacylglycerol synthase activity; GO:0102655,1-18:1-2-trans-16:1-phosphatidylglycerol desaturase activity; GO:0102844,1-18:2-2-16:1-monogalactosyldiacylglycerol desaturase activity (SN2-16:2 forming); GO:0006636,unsaturated fatty acid biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016717,oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0033559,unsaturated fatty acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00487.27:Fatty acid desaturase","--","--","--"]
["MS01G12230",13.416,9.0166,10.9795,0.853,0.7041,0.681,0.7991,0.8057,0.5756,0.8649,0.8809,0.7793,0.9609,0.5427,0.8733,1548,1037,1241,72,71,66,70,66,60,81,87,91,87,49,79,-3.542278411,"4.82094E-62","1.20732E-59","down",-3.51952918,"2.89994E-44","1.73042E-42","down",-3.688091457,"1.00876E-55","1.17831E-53","down",-3.657289294,"3.67841E-50","2.39459E-48","down",-0.103074021,0.710135175,0.811663585,false,-0.120367567,0.714069868,0.838017619,false,0.028822897,0.922532572,0.981724176,false,-0.129141825,0.619418821,0.771779049,false,-0.142065266,0.652987331,0.851157396,false,"chr_001",11582367,11590022,"+","MS01G12230","--","K01110 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [EC:3.1.3.16 3.1.3.48 3.1.3.67] | (RefSeq) phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like (A)","ko00562: Inositol phosphate metabolism; ko01100: Metabolic pathways; ko04070: Phosphatidylinositol signaling system","formin-like protein 18 isoform X1 [Malus domestica]","FH13_ARATH RecName: Full=Formin-like protein 13; Short=AtFH13;","A0A540LPU5_MALBA RecName: Full=Formin-like protein {ECO:0000256|RuleBase:RU361260};","--","GO:0004721,phosphoprotein phosphatase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0140096,catalytic activity, acting on a protein","PF02181.26:Formin Homology 2 Domain","--","--","--"]
["MS01G12240",6.2859,5.2496,5.6365,0.209,0.3111,0.5865,0.1343,0.1914,0.3949,1.0465,1.2504,0.94,0.2382,0.4559,0.4117,370,308,325,9,16,29,6,8,21,50,63,56,11,21,19,-2.227651561,"1.39804E-25","4.98953E-24","down",-3.667538625,"2.29466E-37","1.02538E-35","down",-3.736487104,"2.56825E-30","9.08525E-29","down",-4.26167993,"3.72308E-35","1.25013E-33","down",-2.039428724,"1.20826E-05","8.78471E-05","down",-0.600619915,0.318006966,0.514782496,false,"NA","NA","NA","NA",-1.503936176,0.000641417,0.004319786,"down",-0.054228681,0.922520403,0.974669308,false,"chr_001",11595463,11600735,"+","MS01G12240","--","K20720 reticulon-4 | (RefSeq) reticulon-like protein B21 (A)","--","reticulon-like protein B21 [Malus domestica]","RTNLS_ARATH RecName: Full=Reticulon-like protein B21; Short=AtRTNLB21;","A0A540L8S5_MALBA RecName: Full=Reticulon-like protein {ECO:0000256|RuleBase:RU363132};","--","GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF02453.20:Reticulon","--","--","--"]
["MS01G12250",3.6693,6.0882,4.178,1.3504,1.6149,2.3521,0.5577,0,2.6555,2.4341,3.6273,1.9522,2.5179,1.2625,2.7001,26,43,29,7,10,14,3,0,17,14,22,14,14,7,15,-0.62393677,0.174385685,0.254231444,false,-0.811311861,0.102471745,0.149859283,false,-1.175574116,0.020195172,0.035699311,"down",-1.829467768,0.02997602,0.051020459,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",11602711,11603326,"+","MS01G12250","--","--","--","reticulon-like protein B21 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5GT79_9ROSA RecName: Full=Reticulon-like protein {ECO:0000256|RuleBase:RU363132};","--","GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","--","--","--","--"]
["MS01G12260",3.2637,3.3412,5.1676,1.5478,1.3719,2.696,1.4037,1.5012,1.8431,2.5438,3.1126,3.0932,1.2732,2.4685,3.5681,49,50,76,17,18,34,16,16,25,31,40,47,15,29,42,-0.237328884,0.467255488,0.566297709,false,-0.396155071,0.345908744,0.426494681,false,-0.856862666,0.036041399,0.059856655,false,-1.019873198,0.008250706,0.016003293,"down",-0.76925855,0.043926937,0.103542326,false,-0.609452228,0.21045328,0.394571384,false,-0.163756272,0.724385779,0.930182177,false,-0.602574035,0.139755422,0.291280261,false,-0.438619015,0.385791624,0.669717056,false,"chr_001",11605545,11606186,"+","MS01G12260","--","--","--","F-box/kelch-repeat protein At3g06240-like [Malus domestica]","CPR1_ARATH RecName: Full=F-box protein CPR1; AltName: Full=Protein CONSTITUTIVE EXPRESSER OF PR GENES 1; AltName: Full=Protein CONSTITUTIVE EXPRESSER OF PR GENES 30 {ECO:0000303|PubMed:19682297};","A0A540L8U9_MALBA RecName: Full=F-box domain-containing protein {ECO:0000259|SMART:SM00256};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0031348,negative regulation of defense response; GO:0042177,negative regulation of protein catabolic process; GO:0009626,plant-type hypersensitive response; GO:0016567,protein ubiquitination; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0031347,regulation of defense response; GO:0048519,negative regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009892,negative regulation of metabolic process; GO:0009894,regulation of catabolic process; GO:0009895,negative regulation of catabolic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0030163,protein catabolic process; GO:0042176,regulation of protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051248,negative regulation of protein metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009987,cellular process; GO:0012501,programmed cell death; GO:0033554,cellular response to stress; GO:0034050,programmed cell death induced by symbiont; GO:0043207,response to external biotic stimulus; GO:0044403,biological process involved in symbiotic interaction; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0051707,response to other organism; GO:0051716,cellular response to stimulus; GO:0098542,defense response to other organism; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:0070647,protein modification by small protein conjugation or removal; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00646.36:F-box domain","--","--","--"]
["MS01G12270",3.7373,2.9647,7.5416,1.5445,2.2875,3.518,2.2896,1.4691,0.962,4.6043,5.9909,4.7232,1.9937,1.555,2.9931,43,34,85,13,23,34,20,12,10,43,59,55,18,14,27,0.29612118,0.460105949,0.560023312,false,-0.821902885,0.084309751,0.126288531,false,-0.734452729,0.141202157,0.197987453,false,-1.299948519,0.014598897,0.026768393,"down",-1.593780445,0.000301774,0.00152693,"down",-0.46648613,0.395927661,0.591540124,false,-0.571250577,0.305493524,0.747315908,false,-1.011273031,0.011862934,0.046023384,"down",0.113805186,0.819869308,0.932246784,false,"chr_001",11606296,11607105,"+","MS01G12270","--","--","--","F-box/kelch-repeat protein At3g06240-like [Malus domestica]","FBK50_ARATH RecName: Full=F-box/kelch-repeat protein At3g06240;","A0A5N5GT79_9ROSA RecName: Full=Reticulon-like protein {ECO:0000256|RuleBase:RU363132};","--","--","--","--","--","--"]
["MS01G12280",90.3436,89.568,84.7973,125.7467,94.7877,82.9137,118.1744,110.543,153.3837,79.5216,60.0306,59.2892,87.4555,70.4629,77.7179,3898,3852,3584,3969,3574,3005,3871,3386,5979,2785,2217,2589,2961,2379,2629,-0.219389418,0.224330844,0.312359269,false,0.125694073,0.36862322,0.449695359,false,0.415417092,0.041136878,0.067217239,false,0.806011021,"7.98966E-08","3.49445E-07",false,1.040002859,"3.59136E-07","3.67891E-06","up",0.697364942,"5.0996E-05",0.000549323,false,0.390193526,0.079982429,0.487560406,false,0.652655419,0.006663118,0.029065795,false,0.314885201,0.140366089,0.392923024,false,"chr_001",11634089,11635933,"+","MS01G12280","--","K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11] | (RefSeq) CBL-interacting serine/threonine-protein kinase 20-like (A)","--","CBL-interacting serine/threonine-protein kinase 6-like [Malus domestica]","CIPK6_ARATH RecName: Full=CBL-interacting serine/threonine-protein kinase 6; EC=2.7.11.1; AltName: Full=SNF1-related kinase 3.14; AltName: Full=SOS2-like protein kinase PKS4; AltName: Full=SOS3-interacting protein 3;","A0A0U3BYW9_MALDO RecName: Full=Non-specific serine/threonine protein kinase {ECO:0000256|ARBA:ARBA00012513}; EC=2.7.11.1 {ECO:0000256|ARBA:ARBA00012513};","Serine/threonine protein kinase","GO:0005783,endoplasmic reticulum; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0010540,basipetal auxin transport; GO:0042538,hyperosmotic salinity response; GO:0006468,protein phosphorylation; GO:0051592,response to calcium ion; GO:0009651,response to salt stress; GO:0009414,response to water deprivation; GO:0007165,signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006810,transport; GO:0008150,biological_process; GO:0009914,hormone transport; GO:0009926,auxin polar transport; GO:0010817,regulation of hormone levels; GO:0051179,localization; GO:0051234,establishment of localization; GO:0060918,auxin transport; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0006972,hyperosmotic response; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0042221,response to chemical; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:1901700,response to oxygen-containing compound; GO:0007154,cell communication; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G12290",4.203,6.6001,4.1041,25.7296,17.9836,37.6364,19.9783,10.039,24.6769,12.3824,11.9557,17.1533,17.9316,22.1855,17.2482,23,36,22,103,86,173,83,39,122,55,56,95,77,95,74,1.665046934,"2.73948E-06","1.32258E-05","up",2.234229554,"2.475E-12","1.89733E-11","up",2.646561092,"1.16919E-12","9.90487E-12","up",2.149896556,"1.75912E-07","7.34302E-07","up",0.502044519,0.176987733,0.305345493,false,-0.064700052,0.850744719,0.919434546,false,-0.494785175,0.197767522,0.655728499,false,0.999193641,0.002386419,0.012728913,false,0.436906867,0.150967073,0.409413276,false,"chr_001",11649877,11651449,"+","MS01G12290","--","--","--","hypothetical protein DVH24_021681 [Malus domestica]","--","A0A498JVG1_MALDO RecName: Full=Polysacc_synt_4 domain-containing protein {ECO:0000259|Pfam:PF04669};","--","GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0045492,xylan biosynthetic process; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010410,hemicellulose metabolic process; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0042546,cell wall biogenesis; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044038,cell wall macromolecule biosynthetic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0045491,xylan metabolic process; GO:0070589,cellular component macromolecule biosynthetic process; GO:0070592,cell wall polysaccharide biosynthetic process; GO:0071554,cell wall organization or biogenesis; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","--","--","--","--"]
["MS01G12370",52.9801,51.1547,52.1585,15.6879,18.4095,16.4699,21.4668,29.9693,24.0716,25.6305,32.3869,28.4782,18.7655,15.7377,19.651,1011,973,975,219,307,264,311,406,415,397,529,550,281,235,294,-0.670086596,"1.52904E-07","9.05505E-07",false,-1.236366274,"7.16277E-17","8.46606E-16","down",-1.409696414,"1.37957E-19","2.24056E-18","down",-0.765602259,"1.93188E-05","6.01689E-05",false,-0.082752045,0.671653324,0.782888155,false,0.48638294,0.018051169,0.066889393,false,0.64232593,0.003281931,0.112425517,false,-0.722249475,"5.71378E-05",0.00056495,false,-0.147209801,0.449661846,0.721990792,false,"chr_001",11739573,11741608,"-","MS01G12370","--","K02951 small subunit ribosomal protein S12e | (RefSeq) 40S ribosomal protein S12-like (A)","ko03010: Ribosome","40S ribosomal protein S12-like [Malus domestica]","RS12_HORVU RecName: Full=40S ribosomal protein S12;","A0A540L8T3_MALBA RecName: Full=40S ribosomal protein S12 {ECO:0000256|RuleBase:RU000670};","40S ribosomal protein S12","GO:0005840,ribosome; GO:0003735,structural constituent of ribosome; GO:0006412,translation; GO:0003674,molecular_function; GO:0005198,structural molecule activity; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF01248.29:Ribosomal protein L7Ae/L30e/S12e/Gadd45 family","--","--","--"]
["MS01G12420",14.3119,15.7497,16.2395,29.2805,23.3233,27.6807,25.1007,18.2065,21.9231,19.6843,19.1456,22.4226,19.4945,23.74,19.8009,1641,1800,1824,2456,2337,2666,2185,1482,2271,1832,1879,2602,1754,2130,1780,0.592341443,"3.56214E-06","1.68235E-05",false,0.737618644,"1.71601E-08","8.51718E-08",false,1.007284212,"2.88144E-13","2.59766E-12","up",0.778961751,"1.92561E-06","6.97259E-06",false,0.199460195,0.241866477,0.385288199,false,0.055780756,0.747822496,0.858036661,false,-0.230748237,0.188063373,0.645430687,false,0.432635935,0.003062754,0.015544861,false,0.294470203,0.052350648,0.218052234,false,"chr_001",11761807,11770044,"+","MS01G12420","--","--","--","hypothetical protein C1H46_031552 [Malus baccata]","FIPS5_ARATH RecName: Full=FIP1[V]-like protein {ECO:0000303|PubMed:16282318}; Short=AtFIP1(V) {ECO:0000303|PubMed:16282318}; AltName: Full=Factor interacting with poly(A) polymerase 1-like 5 {ECO:0000305}; Short=AtFIPS5 {ECO:0000303|PubMed:16282318}; AltName: Full=Protein HOMOLOG OF YEAST FIP1 [V] {ECO:0000305};","A0A540L8S0_MALBA RecName: Full=Fip1 domain-containing protein {ECO:0000259|Pfam:PF05182};","Polyadenylation factor I complex, subunit FIP1","GO:0005634,nucleus; GO:0042802,identical protein binding; GO:0003723,RNA binding; GO:0006397,mRNA processing; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0003676,nucleic acid binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016071,mRNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF05182.16:Fip1 motif","--","--","--"]
["MS01G12430",3.447,2.2432,2.0447,0.7641,1.1727,2.6618,1.1658,0.9842,0.5671,2.0085,3.5373,2.4854,2.79,1.4287,1.9606,74,48,43,12,22,48,19,15,11,35,65,54,47,24,33,0.229001355,0.522754307,0.619030756,false,-0.031411691,0.936466883,0.952264341,false,-0.552547964,0.274153518,0.350063732,false,-1.236123761,0.007222265,0.01417111,"down",-1.455249315,0.001238807,0.005223325,"down",-1.189755072,0.014516146,0.056610105,false,-0.678148262,0.256321659,0.710641986,false,-0.765998654,0.126506402,0.27205062,false,-0.496484595,0.345403956,0.634411693,false,"chr_001",11771229,11776437,"+","MS01G12430","--","K11267 sister chromatid cohesion protein PDS5 | (RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1 (A)","--","uncharacterized protein LOC126601761 [Malus sylvestris]","--","A0A540L8R8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD82887.1};","DRIM (Down-regulated in metastasis)-like proteins","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G12440",2.6663,1.5646,1.7461,0.4814,0.403,0.7187,0.5964,0.4252,1.0023,0.9916,1.2343,1.1433,0.7693,0.45,1.0267,53,31,34,7,7,12,9,6,18,16,21,23,12,7,16,-0.644422235,0.118323148,0.183691482,false,-1.122803493,0.02240524,0.039133123,"down",-1.692723148,0.001049223,0.002450189,"down",-1.272027985,0.012728702,0.023661515,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",11777056,11777905,"+","MS01G12440","--","K02068 UDP-glucose/iron transport system ATP-binding protein | (RefSeq) ABC transporter I family member 17-like (A)","--","ABC transporter I family member 1 [Pyrus x bretschneideri]","AB1I_ARATH RecName: Full=ABC transporter I family member 1; Short=ABC transporter ABCI.1; Short=AtABCI1; AltName: Full=Cytochrome c biogenesis ATP-binding export protein ccmA-like; AltName: Full=MRP-related protein 3; AltName: Full=Putative non-intrinsic ABC protein 10; EC=7.6.2.5;","A0A5N5GT73_9ROSA SubName: Full=ABC transporter I family member 1 {ECO:0000313|EMBL:KAB2618805.1};","Lipid exporter ABCA1 and related proteins, ABC superfamily","GO:0016020,membrane; GO:0015439,ABC-type heme transporter activity; GO:0005524,ATP binding; GO:0016787,hydrolase activity; GO:0017004,cytochrome complex assembly; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015232,heme transmembrane transporter activity; GO:0015399,primary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0140359,ABC-type transporter activity; GO:0140657,ATP-dependent activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00005.30:ABC transporter","--","--","--"]
["MS01G12470",150.1679,143.2121,207.7353,246.4223,176.2035,257.3303,232.3106,107.4761,163.9421,243.5735,282.6535,301.1025,289.0294,350.434,207.3645,3582,3405,4854,4300,3673,5156,4207,1820,3533,4716,5771,7269,5410,6541,3878,0.911365064,"1.13721E-07","6.885E-07",false,1.05442794,"2.55376E-06","9.37488E-06","up",0.652530056,0.001562086,0.003528345,false,0.296143399,0.291763569,0.36976937,false,-0.604468099,0.025765646,0.067183673,false,-0.745234093,0.012155227,0.049430064,false,-0.360051005,0.210082286,0.667422549,false,-0.242674271,0.15619636,0.314726782,false,-0.377293395,0.106677721,0.336622616,false,"chr_001",11804551,11805885,"-","MS01G12470","--","K03098 apolipoprotein D and lipocalin family protein | (RefSeq) temperature-induced lipocalin-1 (A)","--","temperature-induced lipocalin-1-like [Malus sylvestris]","TIL_ARATH RecName: Full=Temperature-induced lipocalin-1 {ECO:0000303|PubMed:18671872}; Short=AtTIL1 {ECO:0000303|PubMed:18671872};","A0A498HZE2_MALDO RecName: Full=Lipocln_cytosolic_FA-bd_dom domain-containing protein {ECO:0000259|Pfam:PF08212};","Apolipoprotein D/Lipocalin","GO:0009941,chloroplast envelope; GO:0031969,chloroplast membrane; GO:0005737,cytoplasm; GO:0009898,cytoplasmic side of plasma membrane; GO:0005829,cytosol; GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0005739,mitochondrion; GO:0000325,plant-type vacuole; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0009536,plastid; GO:0045735,nutrient reservoir activity; GO:0030644,cellular chloride ion homeostasis; GO:0071456,cellular response to hypoxia; GO:0006883,cellular sodium ion homeostasis; GO:0010286,heat acclimation; GO:0042538,hyperosmotic salinity response; GO:0006629,lipid metabolic process; GO:1902884,positive regulation of response to oxidative stress; GO:1901002,positive regulation of response to salt stress; GO:0009409,response to cold; GO:0050826,response to freezing; GO:0009408,response to heat; GO:0009644,response to high light intensity; GO:0009416,response to light stimulus; GO:1901562,response to paraquat; GO:0000302,response to reactive oxygen species; GO:0009414,response to water deprivation; GO:0010431,seed maturation; GO:0003674,molecular_function; GO:0006873,cellular ion homeostasis; GO:0008150,biological_process; GO:0009987,cellular process; GO:0019725,cellular homeostasis; GO:0030002,cellular anion homeostasis; GO:0030320,cellular monovalent inorganic anion homeostasis; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055064,chloride ion homeostasis; GO:0055081,anion homeostasis; GO:0055082,cellular chemical homeostasis; GO:0055083,monovalent inorganic anion homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0098771,inorganic ion homeostasis; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0009628,response to abiotic stimulus; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006875,cellular metal ion homeostasis; GO:0030003,cellular cation homeostasis; GO:0030004,cellular monovalent inorganic cation homeostasis; GO:0055065,metal ion homeostasis; GO:0055067,monovalent inorganic cation homeostasis; GO:0055078,sodium ion homeostasis; GO:0055080,cation homeostasis; GO:0009266,response to temperature stimulus; GO:0006970,response to osmotic stress; GO:0006972,hyperosmotic response; GO:0009651,response to salt stress; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006979,response to oxidative stress; GO:0048518,positive regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0080134,regulation of response to stress; GO:1902882,regulation of response to oxidative stress; GO:0047484,regulation of response to osmotic stress; GO:1901000,regulation of response to salt stress; GO:0009314,response to radiation; GO:0009642,response to light intensity; GO:0010033,response to organic substance; GO:1901700,response to oxygen-containing compound; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:0010035,response to inorganic substance; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0021700,developmental maturation; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0032504,multicellular organism reproduction; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048609,multicellular organismal reproductive process; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0071695,anatomical structure maturation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0042170,plastid membrane; GO:0071944,cell periphery; GO:0098552,side of membrane; GO:0098562,cytoplasmic side of membrane; GO:0012505,endomembrane system; GO:0005773,vacuole; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF08212.15:Lipocalin-like domain","--","--","--"]
["MS01G12480",14.8205,14.9562,19.8907,5.4819,5.387,5.5007,4.3061,4.0524,4.9213,8.8071,8.861,10.3367,7.1103,8.8014,6.1158,340,342,447,92,108,106,75,66,102,164,174,240,128,158,110,-0.635386146,0.000806856,0.00233694,false,-0.877376699,"3.95574E-05",0.000120207,false,-1.38333775,"1.81239E-11","1.34791E-10","down",-1.615992892,"2.01598E-14","1.80106E-13","down",-0.967153627,"4.10716E-06","3.35445E-05",false,-0.723733713,0.003052548,0.016534186,false,-0.234889356,0.305066298,0.746849099,false,-0.730018963,0.000315359,0.002396173,false,-0.47999825,0.041021137,0.186672776,false,"chr_001",11808273,11810313,"+","MS01G12480","--","--","--","uncharacterized protein LOC103415557 [Malus domestica]","--","A0A540L8U4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD82880.1};","DRIM (Down-regulated in metastasis)-like proteins","--","PF06364.15:Protein of unknown function (DUF1068)","--","--","--"]
["MS01G12500",4.6121,5.1736,3.8741,1.7127,0.7065,0.9944,1.0284,1.2277,1.8289,2.4831,4.7306,3.6241,3.2627,6.7757,4.0298,254,284,209,69,34,46,43,48,91,111,223,202,141,292,174,-0.158907611,0.535121176,0.630718167,false,0.328201699,0.248734577,0.322740871,false,-1.799286269,"1.36118E-07","6.08861E-07","down",-1.461695923,"7.48735E-08","3.28635E-07","down",-1.291248536,"6.48329E-05",0.000392557,"down",-1.776104433,"1.99713E-07","4.34929E-06","down",0.334272675,0.416615287,0.813738388,false,-1.623892522,"2.18062E-05",0.000245154,"down",-2.103082552,"8.17654E-08","5.65382E-06","down","chr_001",11815096,11818713,"-","MS01G12500","--","K14491 two-component response regulator ARR-B family | (RefSeq) two-component response regulator ARR12-like isoform X1 (A)","ko04075: Plant hormone signal transduction","two-component response regulator ARR12-like [Malus domestica]","ARR18_ARATH RecName: Full=Two-component response regulator ARR18;","A0A540L988_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD82879.1};","GATA-4/5/6 transcription factors","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0009736,cytokinin-activated signaling pathway; GO:0000160,phosphorelay signal transduction system; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009735,response to cytokinin; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071368,cellular response to cytokinin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0035556,intracellular signal transduction; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00072.27:Response regulator receiver domain","GARP-ARR-B","TF","GARP->GARP-ARR-B"]
["MS01G12510",1.2773,1.2536,1.6441,5.0483,4.4801,2.942,5.0838,4.4198,2.9505,3.6603,2.4006,3.0179,2.7247,2.7678,3.0458,46,45,58,133,141,89,139,113,96,107,74,110,77,78,86,1.316181884,"9.80111E-06","4.25242E-05","up",1.326664906,"3.23974E-07","1.35006E-06","up",1.803326539,"1.83959E-08","9.29834E-08","up",1.868488446,"2.96255E-09","1.5506E-08","up",0.563879971,0.07869371,0.164088199,false,0.553435669,0.053014206,0.150021691,false,0.060153126,0.859241812,0.96791063,false,0.505973665,0.122951402,0.267122414,false,0.501926336,0.087274325,0.299686711,false,"chr_001",11823197,11826360,"-","MS01G12510","--","K01076 abhydrolase domain-containing protein 17 [EC:3.1.2.22] | (RefSeq) alpha/beta hydrolase domain-containing protein 17B-like (A)","--","uncharacterized protein LOC126601174 [Malus sylvestris]","--","A0A540L8Q9_MALBA RecName: Full=Hydrolase_4 domain-containing protein {ECO:0000259|Pfam:PF12146};","Predicted alpha/beta hydrolase","--","PF12146.11:Serine aminopeptidase, S33","--","--","--"]
["MS01G12530",3.9859,1.8241,2.1059,142.908,218.9341,177.155,292.9975,282.5525,206.3143,59.2288,59.3121,35.9291,174.3971,65.3702,105.5598,114,52,59,2990,5472,4256,6362,5737,5331,1375,1452,1040,3914,1463,2367,4.471785826,"3.35938E-42","3.24422E-40","up",5.742674901,"9.40059E-25","1.98332E-23","up",6.304914243,"3.48059E-86","1.2643E-83","up",6.912557757,"4.2271E-114","1.6123E-111","up",2.451629366,"8.49854E-21","5.22532E-19","up",1.183631725,0.000381967,0.002998632,"up",0.601469225,0.016383055,0.256234898,false,1.850512278,"1.59417E-11","7.61849E-10","up",0.590045303,0.0917416,0.308603602,false,"chr_001",11833321,11834977,"-","MS01G12530","--","K01183 chitinase [EC:3.2.1.14] | (RefSeq) class V chitinase (A)","ko00520: Amino sugar and nucleotide sugar metabolism; ko01100: Metabolic pathways","class V chitinase [Malus domestica]","CHIC_ARATH RecName: Full=Class V chitinase {ECO:0000303|PubMed:22936594}; Short=AtChiC {ECO:0000303|PubMed:22936594}; EC=3.2.1.14 {ECO:0000269|PubMed:21390509, ECO:0000269|PubMed:22936594}; EC=3.2.1.200 {ECO:0000269|PubMed:21390509}; Flags: Precursor;","A0A540L8P3_MALBA RecName: Full=GH18 domain-containing protein {ECO:0000259|PROSITE:PS51910};","Chitinase","GO:0005576,extracellular region; GO:0099503,secretory vesicle; GO:0008061,chitin binding; GO:0004568,chitinase activity; GO:0008843,endochitinase activity; GO:0035885,exochitinase activity; GO:0006032,chitin catabolic process; GO:0000272,polysaccharide catabolic process; GO:0009737,response to abscisic acid; GO:0009753,response to jasmonic acid; GO:0009651,response to salt stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0097367,carbohydrate derivative binding; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0006022,aminoglycan metabolic process; GO:0006026,aminoglycan catabolic process; GO:0006030,chitin metabolic process; GO:0006040,amino sugar metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0043170,macromolecule metabolic process; GO:0046348,amino sugar catabolic process; GO:0071704,organic substance metabolic process; GO:1901071,glucosamine-containing compound metabolic process; GO:1901072,glucosamine-containing compound catabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901136,carbohydrate derivative catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0016052,carbohydrate catabolic process; GO:0044238,primary metabolic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0070542,response to fatty acid; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle","PF00704.31:Glycosyl hydrolases family 18","--","--","--"]
["MS01G12570",18.8053,15.7105,12.1042,25.7064,24.3276,22.3053,24.1325,31.3586,29.0032,18.9942,19.7085,17.0781,25.5948,12.9879,15.7407,544,453,343,544,615,542,530,644,758,446,488,500,581,294,357,0.441806813,0.035528718,0.065895052,false,0.515379251,0.076939625,0.116559763,false,0.847187593,0.000146073,0.000401785,false,1.136477185,"3.07651E-07","1.24542E-06","up",0.708403435,"3.85996E-05",0.000247173,false,0.637898173,0.020629348,0.074110858,false,0.288335536,0.11992253,0.56241219,false,0.422818305,0.012221022,0.04715484,false,0.358431695,0.201541025,0.479923895,false,"chr_001",11865309,11868954,"-","MS01G12570","--","K17824 DCN1-like protein 4/5 | (RefSeq) DCN1-like protein 5 (A)","--","DCN1-like protein 5 [Malus domestica]","--","A0A5N5GVX0_9ROSA RecName: Full=Defective in cullin neddylation protein {ECO:0000256|RuleBase:RU410713};","Uncharacterized conserved protein","--","PF03556.18:Cullin binding","--","--","--"]
["MS01G12590",0.819,0.8408,1.0889,1.6924,1.1552,0.9977,2.0824,1.5025,1.4126,0.8917,0.8234,0.7904,0.2427,0.4625,0.3887,43,44,56,65,53,44,83,56,67,38,37,42,10,19,16,0.054562972,0.862161029,0.900973214,false,-1.03698893,0.01123631,0.021085572,"down",0.700723841,0.042309642,0.068895419,false,1.150291979,0.000230604,0.000598174,"up",1.106889223,0.000504749,0.002392442,"up",2.201288352,"2.45748E-08","6.47675E-07","up",0.446696103,0.193593904,0.650062866,false,0.662478628,0.061918558,0.161785675,false,1.763697458,"4.31447E-05",0.001121844,"up","chr_001",11872414,11875332,"+","MS01G12590","--","K24755 WD repeat-containing protein 76 | (RefSeq) WD repeat-containing protein 76-like (A)","--","hypothetical protein DVH24_029017 [Malus domestica]","DDB2_ORYSJ RecName: Full=DNA damage-binding protein 2 {ECO:0000305}; AltName: Full=UV-damaged DNA-binding protein 2 {ECO:0000305}; Short=OsUV-DDB2 {ECO:0000303|PubMed:12711392}; AltName: Full=WD40 repeat-containing protein 2 {ECO:0000305}; Short=OsWD40-2 {ECO:0000303|PubMed:22429805};","A0A498HS79_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74296.1};","WD40 protein","GO:0080008,Cul4-RING E3 ubiquitin ligase complex; GO:0005634,nucleus; GO:0003684,damaged DNA binding; GO:0046872,metal ion binding; GO:0006281,DNA repair; GO:0009411,response to UV; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0000151,ubiquitin ligase complex; GO:0005575,cellular_component; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0032991,protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00400.35:WD domain, G-beta repeat","--","--","--"]
["MS01G12600",1.3498,1.0909,0.8421,0.1025,0.1073,0.0446,0.0741,0.132,0.083,0.0924,0.3285,0.0741,0.2389,0.1917,0.0717,72,58,44,4,5,2,3,5,4,4,15,4,10,8,3,-2.575370062,"5.98959E-06","2.71345E-05","down",-2.416961546,"2.49376E-06","9.16929E-06","down",-3.47994381,"5.92462E-09","3.22027E-08","down",-3.245070679,"1.74549E-08","8.30986E-08","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",11876785,11881531,"-","MS01G12600","--","K02209 DNA replication licensing factor MCM5 [EC:5.6.2.3] | (RefSeq) DNA replication licensing factor MCM5-like (A)","ko03030: DNA replication","hypothetical protein DVH24_029019 [Malus domestica]","MCM5_ARATH RecName: Full=DNA replication licensing factor MCM5; EC=3.6.4.12; AltName: Full=Minichromosome maintenance protein 5; Short=AtMCM5;","A0A498HRX3_MALDO RecName: Full=DNA replication licensing factor MCM5 {ECO:0000256|RuleBase:RU368063}; EC=3.6.4.12 {ECO:0000256|RuleBase:RU368063};","DNA replication licensing factor, MCM5 component","GO:0005737,cytoplasm; GO:0042555,MCM complex; GO:0005634,nucleus; GO:0000347,THO complex; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0003678,DNA helicase activity; GO:0003688,DNA replication origin binding; GO:0003697,single-stranded DNA binding; GO:0007049,cell cycle; GO:0006270,DNA replication initiation; GO:0006268,DNA unwinding involved in DNA replication; GO:0000727,double-strand break repair via break-induced replication; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0004386,helicase activity; GO:0008094,ATP-dependent activity, acting on DNA; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006260,DNA replication; GO:0006261,DNA-templated DNA replication; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006996,organelle organization; GO:0016043,cellular component organization; GO:0032392,DNA geometric change; GO:0032508,DNA duplex unwinding; GO:0051276,chromosome organization; GO:0071103,DNA conformation change; GO:0071840,cellular component organization or biogenesis; GO:0000724,double-strand break repair via homologous recombination; GO:0000725,recombinational repair; GO:0006281,DNA repair; GO:0006302,double-strand break repair; GO:0006310,DNA recombination; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0033554,cellular response to stress; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0140513,nuclear protein-containing complex","PF00493.26:MCM P-loop domain","--","--","--"]
["MS01G12620",1.6507,2.0504,2.3271,0.9133,0.6746,0.7018,1.1907,0.9412,0.5655,1.1137,3.2142,0.7378,1.0518,1.6072,1.3034,42,52,58,17,15,15,23,17,13,23,70,19,21,32,26,-0.083796048,0.874088147,0.9091612,false,-0.312224499,0.37226961,0.453266882,false,-1.186188454,0.002771685,0.005956523,"down",-0.879372137,0.038337204,0.063514609,false,-0.781474124,0.21799404,0.356229575,false,-0.552149725,0.239755174,0.430396002,false,0.304206774,0.55888925,0.877822518,false,-1.088619091,0.080880356,0.197943847,false,-0.847778158,0.055638767,0.225603738,false,"chr_001",11911319,11912406,"+","MS01G12620","--","--","--","uncharacterized protein LOC103400335 [Malus domestica]","--","A0A498HU56_MALDO RecName: Full=Uroporphyrinogen-III synthase {ECO:0000256|ARBA:ARBA00013109}; EC=4.2.1.75 {ECO:0000256|ARBA:ARBA00013109}; AltName: Full=Hydroxymethylbilane hydrolyase [cyclizing] {ECO:0000256|ARBA:ARBA00032649}; AltName: Full=Uroporphyrinogen-III cosynthase {ECO:0000256|ARBA:ARBA00031702};","--","GO:0004852,uroporphyrinogen-III synthase activity; GO:0006782,protoporphyrinogen IX biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016835,carbon-oxygen lyase activity; GO:0016836,hydro-lyase activity; GO:0006725,cellular aromatic compound metabolic process; GO:0006778,porphyrin-containing compound metabolic process; GO:0006779,porphyrin-containing compound biosynthetic process; GO:0006783,heme biosynthetic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0033013,tetrapyrrole metabolic process; GO:0033014,tetrapyrrole biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042168,heme metabolic process; GO:0042440,pigment metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046148,pigment biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0046501,protoporphyrinogen IX metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process","PF02602.18:Uroporphyrinogen-III synthase HemD","--","--","--"]
["MS01G12640",4.0353,2.8015,3.9001,1.1955,1.3344,1.5891,1.0913,1.1238,1.2737,0.8317,1.0755,0.8944,0.7039,1.0196,1.2916,263,182,249,57,76,87,54,52,75,44,60,59,36,52,66,-1.754300929,"1.73369E-12","1.98113E-11","down",-1.542881428,"3.20825E-08","1.5406E-07","down",-1.167217186,"2.73292E-06","1.00871E-05","down",-1.337766855,"5.35949E-08","2.38833E-07","down",0.428887329,0.119438392,0.225838178,false,0.220032652,0.48356475,0.668917138,false,-0.17237306,0.515374724,0.862077149,false,0.603440109,0.03012729,0.09449982,false,0.399756015,0.203392294,0.482797604,false,"chr_001",11920257,11926341,"-","MS01G12640","--","--","--","protein ENHANCED DISEASE RESISTANCE 2-like [Pyrus ussuriensis x Pyrus communis]","EDR2_ARATH RecName: Full=Protein ENHANCED DISEASE RESISTANCE 2;","A0A5N5GY71_9ROSA SubName: Full=Protein ENHANCED DISEASE RESISTANCE 2-like {ECO:0000313|EMBL:KAB2618831.1};","--","GO:0005789,endoplasmic reticulum membrane; GO:0010008,endosome membrane; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0070273,phosphatidylinositol-4-phosphate binding; GO:0009873,ethylene-activated signaling pathway; GO:1900056,negative regulation of leaf senescence; GO:0009626,plant-type hypersensitive response; GO:1900150,regulation of defense response to fungus; GO:0009723,response to ethylene; GO:0009751,response to salicylic acid; GO:0003674,molecular_function; GO:0005488,binding; GO:0005543,phospholipid binding; GO:0008289,lipid binding; GO:0035091,phosphatidylinositol binding; GO:1901981,phosphatidylinositol phosphate binding; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0007275,multicellular organism development; GO:0010150,leaf senescence; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048519,negative regulation of biological process; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0051093,negative regulation of developmental process; GO:0090693,plant organ senescence; GO:0099402,plant organ development; GO:1900055,regulation of leaf senescence; GO:0002376,immune system process; GO:0006950,response to stress; GO:0006952,defense response; GO:0006955,immune response; GO:0008219,cell death; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0012501,programmed cell death; GO:0033554,cellular response to stress; GO:0034050,programmed cell death induced by symbiont; GO:0043207,response to external biotic stimulus; GO:0044403,biological process involved in symbiotic interaction; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0002831,regulation of response to biotic stimulus; GO:0009620,response to fungus; GO:0031347,regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0048583,regulation of response to stimulus; GO:0050832,defense response to fungus; GO:0080134,regulation of response to stress; GO:0014070,response to organic cyclic compound; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity; GO:0005768,endosome; GO:0012506,vesicle membrane; GO:0030659,cytoplasmic vesicle membrane; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0097708,intracellular vesicle; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery","PF07059.15:Protein ENHANCED DISEASE RESISTANCE 2, C-terminal","--","--","--"]
["MS01G12680",1.8243,2.7087,2.3093,2.0948,3.0896,1.9981,3.8447,3.1864,3.6346,1.0788,0.7673,0.9373,2.3248,1.0258,1.1169,25,37,31,21,37,23,40,31,45,12,9,13,25,11,12,-1.109316283,0.01815639,0.036941578,"down",-0.315194297,0.517472264,0.596298671,false,0.296590876,0.476718239,0.555580619,false,0.924131785,0.008826824,0.017020871,false,2.04789421,"1.83871E-06","1.61804E-05","up",1.256210108,0.00537058,0.025937181,"up",0.623116179,0.103997178,0.536664579,false,1.424827828,0.005014519,0.023085816,"up",0.640093519,0.218483886,0.501321421,false,"chr_001",11986240,11986825,"+","MS01G12680","--","--","--","uncharacterized protein LOC103400026 [Malus domestica]","--","A0A498HUH9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74309.1};","--","--","--","--","--","--"]
["MS01G12810",8.4191,7.6215,9.7139,2.5694,3.2263,3.6828,4.1263,3.9715,4.1176,6.5128,7.8231,7.274,6.138,5.1043,5.6939,215,194,243,48,72,79,80,72,95,135,171,188,123,102,114,-0.066526933,0.71330652,0.78501073,false,-0.3093277,0.121250209,0.173566319,false,-1.223411283,"1.76551E-07","7.77631E-07","down",-0.791667878,0.000146322,0.000392985,false,-0.71280114,0.000538387,0.002526925,false,-0.466780975,0.038777411,0.119644028,false,0.429914241,0.099522772,0.527168643,false,-1.139575563,"1.50666E-06","2.35905E-05","down",-0.888454507,0.000438404,0.007108593,false,"chr_001",12186621,12188151,"+","MS01G12810","--","K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] | (RefSeq) peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic (A)","--","hypothetical protein DVH24_029046 [Malus domestica]","CPY28_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic; Short=PPIase CYP28; EC=5.2.1.8; AltName: Full=Cyclophilin of 28 kDa; AltName: Full=Cyclophilin-28; Flags: Precursor;","A0A498HXL9_MALDO RecName: Full=Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU363019}; Short=PPIase {ECO:0000256|RuleBase:RU363019}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU363019};","Cyclophilin type peptidyl-prolyl cis-trans isomerase","GO:0009507,chloroplast; GO:0009536,plastid; GO:0031977,thylakoid lumen; GO:0003755,peptidyl-prolyl cis-trans isomerase activity; GO:0000413,protein peptidyl-prolyl isomerization; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016853,isomerase activity; GO:0016859,cis-trans isomerase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0018193,peptidyl-amino acid modification; GO:0018208,peptidyl-proline modification; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009579,thylakoid","PF00160.24:Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD","--","--","--"]
["MS01G12820",26.9671,30.2169,21.1304,9.706,8.8949,9.1696,6.2038,10.3258,8.2119,21.9233,20.1072,20.6795,15.0055,11.9249,19.784,1523,1701,1169,401,439,435,266,414,419,1005,972,1182,665,527,876,-0.134279704,0.465741487,0.564896022,false,-0.457047865,0.044538555,0.071851838,false,-1.284134678,"4.39216E-11","3.12157E-10","down",-1.382128097,"1.26103E-08","6.11702E-08","down",-1.233772672,"2.35173E-08","3.0173E-07","down",-0.908537753,0.000471256,0.003551488,false,-0.098375853,0.673146187,0.914920998,false,-1.131972066,"1.60204E-14","1.23916E-12","down",-0.801899319,0.00027428,0.004889061,false,"chr_001",12195185,12198939,"+","MS01G12820","--","--","--","homeobox protein knotted-1-like 2 isoform X1 [Malus sylvestris]","KNAT3_ARATH RecName: Full=Homeobox protein knotted-1-like 3; AltName: Full=Protein KNAT3;","A0A5N5GY84_9ROSA SubName: Full=Homeobox protein knotted-1-like 13 {ECO:0000313|EMBL:KAB2618851.1};","Transcription factor MEIS1 and related HOX domain proteins","GO:0005829,cytosol; GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0071345,cellular response to cytokine stimulus; GO:0009722,detection of cytokinin stimulus; GO:0006357,regulation of transcription by RNA polymerase II; GO:0009416,response to light stimulus; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0000976,transcription cis-regulatory region binding; GO:0000977,RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000987,cis-regulatory region sequence-specific DNA binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0034097,response to cytokine; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0009593,detection of chemical stimulus; GO:0009719,response to endogenous stimulus; GO:0009720,detection of hormone stimulus; GO:0009725,response to hormone; GO:0009726,detection of endogenous stimulus; GO:0009735,response to cytokinin; GO:0051606,detection of stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009314,response to radiation; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF05920.14:Homeobox KN domain","HB-KNOX","TF","HB->HB-KNOX"]
["MS01G12860",7.9351,8.0052,5.8054,2.8323,3.0772,2.0993,2.9614,2.7944,3.1717,3.8561,3.3477,2.657,1.9663,1.9718,2.1929,180,181,129,47,61,40,51,45,65,71,65,61,35,35,39,-0.959177516,0.000442374,0.001366854,false,-1.537959871,"2.02379E-08","9.94786E-08","down",-1.223504936,"3.98903E-05",0.000121236,"down",-1.005260168,0.000130179,0.000353198,"down",-0.03269855,0.911762478,0.94703543,false,0.548880188,0.067005636,0.177414979,false,0.21544223,0.49695893,0.853946874,false,-0.247705939,0.465018264,0.650333701,false,0.341007975,0.313142292,0.604939925,false,"chr_001",12226149,12227698,"+","MS01G12860","--","K11982 E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27] | (RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SIRP1 (A)","--","hypothetical protein C1H46_011228 [Malus baccata]","RHY1A_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase RHY1A {ECO:0000305}; EC=2.3.2.27; AltName: Full=RING-H2 finger Y1a {ECO:0000303|PubMed:9781696}; AltName: Full=RING-H2 zinc finger protein RHY1a {ECO:0000305}; AltName: Full=RING-type E3 ubiquitin transferase RHY1A {ECO:0000305};","A0A540MW86_MALBA RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};","FOG: Predicted E3 ubiquitin ligase","GO:0046872,metal ion binding; GO:0016740,transferase activity; GO:0016567,protein ubiquitination; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF13639.9:Ring finger domain","--","--","--"]
["MS01G12870",1.3537,0.932,0.7858,0.2177,0.1822,0.0632,0.1398,0,0.0881,0.0654,0.1551,0.0525,0,0,0.0339,51,35,29,6,6,2,4,0,3,2,5,2,0,0,1,-3.335649293,"7.58324E-07","4.00737E-06","down",-6.111354826,"1.79218E-06","6.74083E-06","down",-2.523913741,"5.30201E-05",0.000157532,"down",-3.447933085,"4.8782E-06","1.66471E-05","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",12231356,12233341,"+","MS01G12870","--","--","--","hypothetical protein DVH24_029051 [Malus domestica]","--","A0A498HU81_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74330.1};","--","--","--","--","--","--"]
["MS01G12900",347.4031,417.1922,551.0356,503.3308,405.7413,553.9703,470.8861,319.252,327.3983,870.2774,914.7554,660.0123,652.3429,788.8101,570.8221,3924,4697,6097,4159,4005,5256,4038,2560,3341,7979,8844,7545,5782,6972,5055,1.086467142,"2.31823E-07","1.33125E-06","up",0.910049853,"4.46875E-06","1.58227E-05",false,0.366874825,0.070672109,0.108172633,false,0.057355764,0.80571876,0.848349821,false,-1.019192864,"7.63998E-06","5.8292E-05","down",-0.839897869,0.000106011,0.001020565,false,-0.313428325,0.140859924,0.595577012,false,-0.704232806,0.000223238,0.001786597,false,-0.518144611,0.003738348,0.035510462,false,"chr_001",12251693,12252175,"+","MS01G12900","--","--","--","hypothetical protein DVH24_029054 [Malus domestica]","--","A0A498HZJ5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74333.1};","--","--","--","--","--","--"]
["MS01G12950",4.613,4.3831,3.1145,1.9351,2.2902,2.1211,2.0897,2.9223,2.8636,1.4133,2.1386,1.4952,1.7107,1.6843,1.4009,189,179,125,58,82,73,65,85,106,47,75,62,55,54,45,-1.086625915,0.000107441,0.000382297,"down",-1.047123679,0.000117499,0.000328684,"down",-0.718000457,0.007885288,0.015404419,false,-0.343872742,0.204209009,0.272810544,false,0.755812975,0.009612104,0.029785255,false,0.719807452,0.01021237,0.043139508,false,0.373047505,0.170823842,0.627612837,false,0.385001959,0.191714767,0.36172862,false,0.355442672,0.201872401,0.480382831,false,"chr_001",12262261,12265253,"-","MS01G12950","--","K14803 protein phosphatase PTC2/3 [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 27 isoform X1 (A)","--","probable protein phosphatase 2C 27 isoform X1 [Malus domestica]","P2C27_ORYSJ RecName: Full=Probable protein phosphatase 2C 27; Short=OsPP2C27; EC=3.1.3.16;","A0A5N5GYL0_9ROSA RecName: Full=Protein-serine/threonine phosphatase {ECO:0000256|ARBA:ARBA00013081}; EC=3.1.3.16 {ECO:0000256|ARBA:ARBA00013081};","Serine/threonine protein phosphatase","GO:0046872,metal ion binding; GO:0017018,myosin phosphatase activity; GO:0006470,protein dephosphorylation; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0004721,phosphoprotein phosphatase activity; GO:0004722,protein serine/threonine phosphatase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016311,dephosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF00481.24:Protein phosphatase 2C","DBP","TF","DBP"]
["MS01G12980",5.4398,4.1762,9.0299,1.0346,0.2165,0.8447,0.1246,0.3332,0.8377,5.3031,10.6658,5.9825,2.1098,2.418,3.9217,115,88,187,16,4,15,2,5,16,91,193,128,35,40,65,0.416689473,0.24790414,0.339362359,false,-0.845862569,0.021213881,0.037283971,false,-2.959427177,"9.07125E-09","4.79497E-08","down",-3.533064914,"8.2694E-11","5.17599E-10","down",-3.93707216,"3.42626E-13","9.1472E-12","down",-2.672569899,"6.14293E-06","8.8492E-05","down","NA","NA","NA","NA",-3.365638553,"1.75802E-11","8.28987E-10","down",-2.091147242,0.000117836,0.002506664,"down","chr_001",12299759,12301569,"-","MS01G12980","--","--","--","hypothetical protein DVH24_029064 [Malus domestica]","--","A0A498HZK3_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74343.1};","--","GO:0008083,growth factor activity; GO:0003674,molecular_function; GO:0005102,signaling receptor binding; GO:0005488,binding; GO:0005515,protein binding; GO:0030545,signaling receptor regulator activity; GO:0030546,signaling receptor activator activity; GO:0048018,receptor ligand activity; GO:0098772,molecular function regulator activity","--","--","--","--"]
["MS01G13000",4.7275,6.3507,6.6256,0.9493,0.6113,1.0493,0.5981,0.4891,1.3895,0.9213,1.8098,2.2432,1.1232,1.5018,1.6012,177,237,243,26,20,33,17,13,47,28,58,85,33,44,47,-1.643512067,"2.18403E-07","1.25932E-06","down",-1.773736748,"5.34151E-12","3.96612E-11","down",-2.556340939,"1.22847E-17","1.67313E-16","down",-2.544671023,"5.3383E-12","3.76874E-11","down",-0.891729137,0.081402329,0.168425563,false,-0.758661533,0.098198069,0.233061435,false,0.002622714,0.995920412,0.998732544,false,-0.891428063,0.041588211,0.12020818,false,-0.757549593,0.041739588,0.18876703,false,"chr_001",12313120,12315604,"-","MS01G13000","--","--","--","protein CHLORORESPIRATORY REDUCTION 6, chloroplastic-like [Malus domestica]","CRR6_ARATH RecName: Full=Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic {ECO:0000305}; Flags: Precursor;","A0A540LPI5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD88404.1};","--","GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0009535,chloroplast thylakoid membrane; GO:0005829,cytosol; GO:0010275,NAD(P)H dehydrogenase complex assembly; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane","PF08847.14:Chlororespiratory reduction 6","--","--","--"]
["MS01G13030",0.2155,0.1179,0.16,7.8724,14.2112,5.5035,10.6818,18.5144,10.2121,4.3439,1.6477,1.2581,6.6151,3.1291,5.4716,11,6,8,294,634,236,414,671,471,180,72,65,265,125,219,4.085781844,"2.64305E-12","2.96638E-11","up",5.24278273,"4.11797E-34","1.54749E-32","up",6.039769714,"3.72318E-35","1.74369E-33","up",6.610160386,"7.80181E-57","6.5566E-55","up",2.539783657,"6.07549E-08","7.20285E-07","up",1.382007104,"4.51155E-05",0.000495429,"up",0.563678033,0.168206568,0.623742214,false,1.976032046,0.000157681,0.001337745,"up",0.826796912,0.044602594,0.196674308,false,"chr_001",12338138,12340910,"+","MS01G13030","--","--","--","uncharacterized methyltransferase At2g41040, chloroplastic-like isoform X1 [Malus sylvestris]","Y2104_ARATH RecName: Full=Uncharacterized methyltransferase At2g41040, chloroplastic; EC=2.1.1.-; Flags: Precursor;","A0A498HSC7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74346.1};","--","GO:0009507,chloroplast; GO:0010287,plastoglobule; GO:0008168,methyltransferase activity; GO:0032259,methylation; GO:0006744,ubiquinone biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016741,transferase activity, transferring one-carbon groups; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0006743,ubiquinone metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0042180,cellular ketone metabolic process; GO:0042181,ketone biosynthetic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:1901661,quinone metabolic process; GO:1901663,quinone biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma; GO:0009570,chloroplast stroma","PF08241.15:Methyltransferase domain","--","--","--"]
["MS01G13040",2.4513,3.3961,3.4954,4.4146,6.1443,4.4468,7.0213,6.5769,5.8141,1.9654,1.3637,1.384,3.8676,1.7901,2.9777,63,87,88,83,138,96,137,120,135,41,30,36,78,36,60,-0.798274722,0.014113287,0.029665108,false,0.186023006,0.588479622,0.661464136,false,0.908987678,0.001674638,0.003759479,false,1.341680491,"6.96324E-08","3.06671E-07","up",2.154970948,"7.79453E-14","2.22524E-12","up",1.172464573,0.000219571,0.001877108,"up",0.428011302,0.109251078,0.545145437,false,1.725828737,"2.81324E-07","5.3959E-06","up",0.751001918,0.035600014,0.170395644,false,"chr_001",12341523,12344504,"+","MS01G13040","--","K00559 sterol 24-C-methyltransferase [EC:2.1.1.41] | (RefSeq) cycloartenol-C-24-methyltransferase (A)","ko00100: Steroid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","uncharacterized methyltransferase At2g41040, chloroplastic-like isoform X2 [Malus sylvestris]","Y2104_ARATH RecName: Full=Uncharacterized methyltransferase At2g41040, chloroplastic; EC=2.1.1.-; Flags: Precursor;","A0A498HSC7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74346.1};","--","GO:0009507,chloroplast; GO:0010287,plastoglobule; GO:0008168,methyltransferase activity; GO:0032259,methylation; GO:0006744,ubiquinone biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016741,transferase activity, transferring one-carbon groups; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0006743,ubiquinone metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0042180,cellular ketone metabolic process; GO:0042181,ketone biosynthetic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:1901661,quinone metabolic process; GO:1901663,quinone biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma; GO:0009570,chloroplast stroma","PF08241.15:Methyltransferase domain","--","--","--"]
["MS01G13070",0.0246,0.0247,0,0.1344,0.1969,0.0585,0.3237,0.0692,0.1632,0.3936,0.3732,1.2141,1.2214,2.1356,0.6583,1,1,0,4,7,2,10,2,6,13,13,50,39,68,21,"NA","NA","NA","NA",6.631667659,"7.20298E-09","3.74898E-08","up","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-2.843002842,"1.39011E-05",0.000180012,"down","NA","NA","NA","NA","NA","NA","NA","NA",-3.398851652,"5.80825E-07","3.04911E-05","down","chr_001",12368449,12371808,"+","MS01G13070","--","--","--","uncharacterized protein LOC103400047 [Malus domestica]","--","A0A498HUM2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74349.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF06687.15:SUR7/PalI family","--","--","--"]
["MS01G13140",8.4297,9.5847,10.7958,20.8115,16.8368,16.1175,16.4868,21.0135,27.1999,8.3082,9.8483,8.6825,11.7841,11.099,9.579,165,187,207,298,288,265,245,292,481,132,165,172,181,170,147,0.08395068,0.652140318,0.733533745,false,0.468116568,0.016361057,0.029569635,false,1.11763197,"5.6744E-08","2.67222E-07","up",1.447047693,"5.93158E-11","3.76819E-10","up",1.376610777,"1.05591E-09","1.70713E-08","up",0.996003891,"1.48787E-05",0.000191062,false,0.328908556,0.170941477,0.627612837,false,1.050212002,"3.09562E-07","5.87402E-06","up",0.67506418,0.001282168,0.016302357,false,"chr_001",12434909,12435745,"+","MS01G13140","--","K26538 protein PHOX | (RefSeq) protein PHOX1 (A)","--","protein PHOX1-like [Malus sylvestris]","PHOX1_ARATH RecName: Full=Protein PHOX1 {ECO:0000303|PubMed:20856808}; AltName: Full=Protein MADB1 {ECO:0000303|PubMed:28096376}; AltName: Full=Putative myosin adapter B1 {ECO:0000303|PubMed:28096376};","A0A540LPI9_MALBA RecName: Full=PB1 domain-containing protein {ECO:0000259|PROSITE:PS51745};","Myosin assembly protein/sexual cycle protein and related proteins","GO:0030659,cytoplasmic vesicle membrane; GO:0080115,myosin XI tail binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0017022,myosin binding; GO:0032029,myosin tail binding; GO:0032036,myosin heavy chain binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012506,vesicle membrane; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity","PF07719.20:Tetratricopeptide repeat","--","--","--"]
["MS01G13150",13.9213,13.8833,11.9207,27.7783,24.2996,25.5278,31.8022,29.9706,38.6377,12.9015,14.1766,11.9486,17.1054,17.6844,11.979,335,333,281,489,511,516,581,512,840,252,292,291,323,333,226,0.157668547,0.348554211,0.448026337,false,0.52790954,0.011795249,0.022025305,false,1.178646964,"1.19711E-12","1.0127E-11","up",1.615842079,"3.38669E-22","5.31123E-21","up",1.471726082,"3.74094E-19","1.91814E-17","up",1.103758073,"1.1538E-07","2.65854E-06","up",0.436517413,0.006807148,0.166122098,false,1.037759038,"2.31802E-10","8.78525E-09","up",0.676551316,0.001159806,0.015064435,false,"chr_001",12436069,12437195,"+","MS01G13150","--","K26538 protein PHOX | (RefSeq) protein PHOX1 (A)","--","protein PHOX1-like [Malus sylvestris]","PHOX1_ARATH RecName: Full=Protein PHOX1 {ECO:0000303|PubMed:20856808}; AltName: Full=Protein MADB1 {ECO:0000303|PubMed:28096376}; AltName: Full=Putative myosin adapter B1 {ECO:0000303|PubMed:28096376};","A0A498HSD8_MALDO RecName: Full=PB1 domain-containing protein {ECO:0000259|PROSITE:PS51745};","Myosin assembly protein/sexual cycle protein and related proteins","GO:0030659,cytoplasmic vesicle membrane; GO:0080115,myosin XI tail binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0017022,myosin binding; GO:0032029,myosin tail binding; GO:0032036,myosin heavy chain binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012506,vesicle membrane; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity","PF13414.9:TPR repeat","--","--","--"]
["MS01G13160",21.8688,27.0822,23.587,136.1472,85.9105,101.4268,105.8762,81.5724,79.7317,84.9355,92.7679,106.0141,116.4312,100.9962,97.5852,1344,1659,1420,6121,4614,5236,4940,3559,4427,4237,4880,6594,5615,4857,4702,2.152757482,"1.0347E-49","1.39619E-47","up",2.412955373,"2.34569E-58","2.36466E-56","up",2.370271324,"3.40676E-29","1.12126E-27","up",2.167863577,"1.4386E-31","3.95548E-30","up",0.027247113,0.878670244,0.927035617,false,-0.230807766,0.20072551,0.381843475,false,-0.204340477,0.367852544,0.790139752,false,0.234550254,0.251921579,0.435285036,false,-0.018174784,0.929621002,0.977475624,false,"chr_001",12438097,12443725,"-","MS01G13160","--","--","--","F-box/LRR-repeat protein 13-like [Malus domestica]","--","B2LUQ9_MALDO SubName: Full=F-box-containing protein 1 {ECO:0000313|EMBL:ACB87911.1};","Leucine rich repeat proteins, some proteins contain F-box","--","PF13855.9:Leucine rich repeat","--","--","--"]
["MS01G13170",29.4922,27.3657,23.8708,43.9855,37.9985,43.2883,37.2254,30.1012,29.7213,43.6667,48.3893,44.7939,45.3115,46.0964,42.8968,1318,1219,1045,1438,1484,1625,1263,955,1200,1584,1851,2026,1589,1612,1503,0.945121404,"1.11415E-11","1.16094E-10",false,1.024888284,"7.01727E-13","5.72883E-12","up",0.844769044,"4.39712E-08","2.10601E-07",false,0.549371853,0.002410162,0.005214714,false,-0.383831165,0.01422857,0.041158529,false,-0.461406386,0.003444644,0.018208907,false,-0.298139235,0.069512871,0.461097325,false,-0.083603422,0.488767539,0.67209088,false,-0.155177892,0.209623971,0.490318705,false,"chr_001",12446179,12450759,"-","MS01G13170","--","K20032 palmitoyltransferase ZDHHC13/17 [EC:2.3.1.225] | (RefSeq) protein S-acyltransferase 24-like (A)","--","protein S-acyltransferase 24-like [Malus sylvestris]","ZDH22_ARATH RecName: Full=Protein S-acyltransferase 24; EC=2.3.1.225; AltName: Full=Ankyrin repeat-containing S-palmitoyltransferase; AltName: Full=Palmitoyltransferase TIP1; AltName: Full=Protein TIP GROWTH DEFECTIVE 1; Short=AtTIP1; AltName: Full=Zinc finger DHHC domain-containing protein TIP1;","A0A498HS33_MALDO RecName: Full=S-acyltransferase {ECO:0000256|RuleBase:RU079119}; EC=2.3.1.225 {ECO:0000256|RuleBase:RU079119}; AltName: Full=Palmitoyltransferase {ECO:0000256|RuleBase:RU079119};","Ankyrin repeat and DHHC-type Zn-finger domain containing proteins","GO:0030659,cytoplasmic vesicle membrane; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0005802,trans-Golgi network; GO:0000035,acyl binding; GO:0016409,palmitoyltransferase activity; GO:0019706,protein-cysteine S-palmitoyltransferase activity; GO:0009932,cell tip growth; GO:0018345,protein palmitoylation; GO:0003674,molecular_function; GO:0005488,binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0016417,S-acyltransferase activity; GO:0019707,protein-cysteine S-acyltransferase activity; GO:0140096,catalytic activity, acting on a protein; GO:0000902,cell morphogenesis; GO:0008150,biological_process; GO:0009653,anatomical structure morphogenesis; GO:0009826,unidimensional cell growth; GO:0009987,cellular process; GO:0016049,cell growth; GO:0032502,developmental process; GO:0040007,growth; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0060560,developmental growth involved in morphogenesis; GO:0006497,protein lipidation; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0019538,protein metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0036211,protein modification process; GO:0042157,lipoprotein metabolic process; GO:0042158,lipoprotein biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043543,protein acylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012506,vesicle membrane; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity; GO:0012505,endomembrane system; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane; GO:0031984,organelle subcompartment; GO:0098791,Golgi apparatus subcompartment","PF01529.23:DHHC palmitoyltransferase","--","--","--"]
["MS01G13220",10.3571,6.5984,7.6286,1.135,1.9003,1.8729,1.2088,2.37,0.6288,5.8146,5.8969,5.3111,4.4274,2.932,3.9018,474,301,342,38,76,72,42,77,26,216,231,246,159,105,140,-0.345379143,0.118669396,0.184112947,false,-0.833723593,0.001035248,0.00243108,false,-2.106282331,"1.06153E-12","9.02622E-12","down",-2.257475303,"1.33984E-07","5.6862E-07","down",-1.902391872,"9.48321E-06","7.04999E-05","down",-1.411586051,0.001452258,0.009016902,"down",-0.150011019,0.768150634,0.942998047,false,-1.741856256,"3.65695E-11","1.61698E-09","down",-1.245987351,"5.03626E-05",0.001262161,"down","chr_001",12502527,12505451,"+","MS01G13220","--","K07964 heparanase [EC:3.2.1.166] | (RefSeq) heparanase-like protein 3 (A)","ko00531: Glycosaminoglycan degradation; ko01100: Metabolic pathways","hypothetical protein C1H46_026046 [Malus baccata]","HPSE3_ARATH RecName: Full=Heparanase-like protein 3; EC=3.2.-.-; Flags: Precursor;","A0A540LPH7_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD88387.1};","--","GO:0005576,extracellular region; GO:0005765,lysosomal membrane; GO:0004566,beta-glucuronidase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0000323,lytic vacuole; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005764,lysosome; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0098852,lytic vacuole membrane","PF03662.17:Glycosyl hydrolase family 79, N-terminal domain","--","--","--"]
["MS01G13290",2.1073,2.5253,2.5397,6.7216,5.208,6.3416,7.3634,5.339,6.4631,3.6239,3.8469,4.0921,4.7742,3.8526,3.7332,144,172,170,336,311,364,382,259,399,201,225,283,256,206,200,0.877036421,"4.63379E-07","2.53674E-06",false,1.081248158,"5.42127E-08","2.52329E-07","up",1.561206982,"7.96434E-17","1.01033E-15","up",1.702688034,"1.77087E-17","2.01543E-16","up",0.838315709,"7.62595E-06","5.82006E-05",false,0.636627056,0.002264967,0.01299035,false,0.139228357,0.477039466,0.846159379,false,0.701165387,"4.98164E-05",0.000501823,false,0.505446999,0.010336117,0.073807807,false,"chr_001",12551158,12554857,"-","MS01G13290","--","K17604 zinc finger SWIM domain-containing protein 3 | (RefSeq) uncharacterized protein LOC103433831 isoform X1 (A)","--","uncharacterized protein LOC103400060 [Malus domestica]","--","A0A5N5GSJ2_9ROSA RecName: Full=SWIM-type domain-containing protein {ECO:0000259|PROSITE:PS50966};","--","GO:0008270,zinc ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding","PF03108.18:MuDR family transposase","--","--","--"]
["MS01G13320",9.7594,8.3451,10.4687,27.0512,20.7549,24.0414,28.3798,24.5335,27.0559,14.1877,14.5243,17.0904,18.1964,17.6143,17.8868,650,554,683,1318,1208,1345,1435,1160,1628,767,828,1152,951,918,934,0.868982653,"1.18326E-08","8.3135E-08",false,1.204245076,"1.15585E-18","1.58719E-17","up",1.544495362,"2.6115E-20","4.48853E-19","up",1.769759946,"5.81368E-33","1.72957E-31","up",0.913383563,"1.68656E-10","3.09086E-09",false,0.580260117,"6.81147E-06","9.69618E-05",false,0.223532523,0.150517835,0.604459105,false,0.692974066,"1.88096E-05",0.000215302,false,0.364787756,0.013788494,0.089948103,false,"chr_001",12572499,12575948,"+","MS01G13320","--","--","--","translocase of chloroplast 90, chloroplastic-like [Malus sylvestris]","TOC90_ARATH RecName: Full=Translocase of chloroplast 90, chloroplastic; Short=AtToc90; EC=3.6.5.-; AltName: Full=90 kDa chloroplast outer envelope protein; AltName: Full=Plastid protein import 4;","A0A498HUB6_MALDO RecName: Full=AIG1-type G domain-containing protein {ECO:0000259|PROSITE:PS51720};","--","GO:0009707,chloroplast outer membrane; GO:0016021,integral component of membrane; GO:0005525,GTP binding; GO:0016787,hydrolase activity; GO:0046872,metal ion binding; GO:0045036,protein targeting to chloroplast; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0019001,guanyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0043169,cation binding; GO:0006605,protein targeting; GO:0006810,transport; GO:0006886,intracellular protein transport; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0033365,protein localization to organelle; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0072594,establishment of protein localization to organelle; GO:0072596,establishment of protein localization to chloroplast; GO:0072598,protein localization to chloroplast; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009527,plastid outer membrane; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0019867,outer membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031968,organelle outer membrane; GO:0031969,chloroplast membrane; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF11886.11:Translocase of chloroplast 159/132, membrane anchor domain","--","--","--"]
["MS01G13370",2.9453,2.4289,2.1724,1.8339,1.6411,1.8358,2.0921,2.3676,2.236,0.8929,1.0269,0.9447,1.4346,0.7291,1.0228,191,157,138,87,93,100,103,109,131,47,57,62,73,37,52,-1.215061593,"8.17693E-07","4.29728E-06","down",-0.949865473,0.001861166,0.004145484,false,-0.296860303,0.203114742,0.270934872,false,0.106981769,0.638101732,0.706495219,false,1.335039062,"1.97267E-08","2.56573E-07","up",1.073599995,0.000404856,0.003143545,"up",0.402523883,0.0658981,0.451509346,false,0.935260019,0.00017331,0.001449546,false,0.678961587,0.031309942,0.156906343,false,"chr_001",12616992,12620617,"+","MS01G13370","--","K05016 chloride channel 7 | (RefSeq) putative chloride channel-like protein CLC-g (A)","--","hypothetical protein DVH24_029096 [Malus domestica]","CLCG_ARATH RecName: Full=Putative chloride channel-like protein CLC-g; AltName: Full=CBS domain-containing protein CBSCLC6;","A0A498HXR9_MALDO RecName: Full=Chloride channel protein {ECO:0000256|RuleBase:RU361221};","Cl- channel CLC-7 and related proteins (CLC superfamily)","GO:0034707,chloride channel complex; GO:0043231,intracellular membrane-bounded organelle; GO:0009705,plant-type vacuole membrane; GO:0015108,chloride transmembrane transporter activity; GO:0005247,voltage-gated chloride channel activity; GO:0034765,regulation of ion transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0008509,anion transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015103,inorganic anion transmembrane transporter activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0005216,ion channel activity; GO:0005244,voltage-gated ion channel activity; GO:0005253,anion channel activity; GO:0005254,chloride channel activity; GO:0008308,voltage-gated anion channel activity; GO:0015267,channel activity; GO:0022803,passive transmembrane transporter activity; GO:0022832,voltage-gated channel activity; GO:0022836,gated channel activity; GO:0006810,transport; GO:0006811,ion transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032879,regulation of localization; GO:0034220,ion transmembrane transport; GO:0034762,regulation of transmembrane transport; GO:0043269,regulation of ion transport; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051049,regulation of transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0031224,intrinsic component of membrane; GO:0032991,protein-containing complex; GO:0034702,ion channel complex; GO:0098796,membrane protein complex; GO:0110165,cellular anatomical entity; GO:1902495,transmembrane transporter complex; GO:1990351,transporter complex; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0000325,plant-type vacuole; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle","PF00654.23:Voltage gated chloride channel","--","--","--"]
["MS01G13470",130.0197,111.5801,99.7072,3.0973,2.2618,8.8958,3.175,1.3581,0.8538,78.2201,126.556,86.1221,7.0651,19.2834,21.337,2697,2307,2026,47,41,155,50,20,16,1317,2247,1808,115,313,347,-0.054484217,0.792693672,0.847867768,false,-2.558790259,"8.87671E-15","8.67608E-14","down",-4.396661841,"2.34649E-26","6.42986E-25","down",-5.70345046,"2.48854E-52","1.79694E-50","down",-5.638991124,"2.39639E-44","7.2425E-42","down",-3.128292631,"6.47537E-10","2.40851E-08","down",-1.299563583,0.03596872,0.356020612,false,-4.329914532,"3.39731E-24","1.03698E-21","down",-1.817908921,0.000448393,0.007225901,"down","chr_001",12772956,12774374,"+","MS01G13470","--","--","--","hypothetical protein DVH24_029107 [Malus domestica]","PRF1_SOLLC RecName: Full=36.4 kDa proline-rich protein;","A0A498HSG6_MALDO RecName: Full=AAI domain-containing protein {ECO:0000259|SMART:SM00499};","--","--","PF14547.9:Hydrophobic seed protein","--","--","--"]
["MS01G13490",0.059,0.1775,0.1806,0.8063,3.1721,0.8426,3.1076,3.4894,2.1544,0.654,0,0.5245,0.9771,0.9045,1.3541,1,3,3,10,47,12,40,42,33,9,0,9,13,12,18,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",4.6809913,"1.43285E-11","9.68144E-11","up",2.989635562,"1.96027E-05",0.000135979,"up",1.441633182,0.001004175,0.006621048,"up",0.88959131,0.148489495,0.60305542,false,"NA","NA","NA","NA","NA","NA","NA","NA","chr_001",12806400,12807124,"-","MS01G13490","--","--","--","hypothetical protein C1H46_011460 [Malus baccata]","--","A0A540MVU5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE02902.1};","--","--","--","--","--","--"]
["MS01G13500",2.1362,2.2284,1.9949,1.0619,0.5139,0.9392,0.8793,0.7523,1.2494,0.5981,0.7657,0.7676,0.6032,0.636,0.6657,176,183,161,64,37,65,55,44,93,40,54,64,39,41,43,-1.390228434,"8.85715E-10","7.28871E-09","down",-1.448248648,"8.58197E-10","5.02948E-09","down",-1.13824938,0.000126083,0.000350753,"down",-0.858769981,0.000658306,0.001578514,false,0.545073247,0.0775301,0.162268341,false,0.604439292,0.054036313,0.152120741,false,0.275676607,0.445347632,0.827721662,false,0.271483895,0.443517634,0.630294623,false,0.334304824,0.342079398,0.631195647,false,"chr_001",12812758,12817784,"-","MS01G13500","--","K11138 telomere-associated protein RIF1 | (RefSeq) uncharacterized protein LOC103421216 (A)","--","hypothetical protein DVH24_029109 [Malus domestica]","--","A0A498HS59_MALDO RecName: Full=Rif1_N domain-containing protein {ECO:0000259|Pfam:PF12231};","--","GO:0000781,chromosome, telomeric region; GO:0005634,nucleus; GO:0007049,cell cycle; GO:0051052,regulation of DNA metabolic process; GO:0008150,biological_process; GO:0009987,cellular process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005694,chromosome; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0098687,chromosomal region; GO:0110165,cellular anatomical entity; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle","PF12231.11:Rap1-interacting factor 1 N terminal","--","--","--"]
["MS01G13510",2.189,2.2472,2.2346,4.8711,3.6117,2.909,4.5596,3.5853,3.5498,4.7664,5.531,7.6455,5.5142,6.9609,4.9996,43,44,43,70,62,48,68,50,63,76,93,152,85,107,77,1.615770383,"1.67266E-08","1.14951E-07","up",1.681361525,"4.89996E-10","2.95609E-09","up",0.987338241,0.002909883,0.006226564,false,1.0932723,0.000234545,0.000607973,"up",-0.508921507,0.081987162,0.16948747,false,-0.573929942,0.037705623,0.117146931,false,0.103800244,0.751144194,0.938396631,false,-0.608160275,0.063106844,0.164244429,false,-0.669246326,0.029997793,0.15311578,false,"chr_001",12824803,12825840,"-","MS01G13510","--","--","--","uncharacterized protein LOC114821801 isoform X1 [Malus domestica]","CPD_ARATH RecName: Full=Cyclic phosphodiesterase; Short=CPDase; EC=3.1.4.-;","A0A5N5GTW2_9ROSA RecName: Full=F-box domain-containing protein {ECO:0000259|SMART:SM00256};","--","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0004113,2',3'-cyclic-nucleotide 3'-phosphodiesterase activity; GO:0009187,cyclic nucleotide metabolic process; GO:0006388,tRNA splicing, via endonucleolytic cleavage and ligation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004112,cyclic-nucleotide phosphodiesterase activity; GO:0008081,phosphoric diester hydrolase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0042578,phosphoric ester hydrolase activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009117,nucleotide metabolic process; GO:0009987,cellular process; GO:0019637,organophosphate metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0000394,RNA splicing, via endonucleolytic cleavage and ligation; GO:0006396,RNA processing; GO:0006399,tRNA metabolic process; GO:0008033,tRNA processing; GO:0008380,RNA splicing; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0034470,ncRNA processing; GO:0034660,ncRNA metabolic process; GO:0043170,macromolecule metabolic process; GO:0090304,nucleic acid metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF07823.14:Cyclic phosphodiesterase-like protein","--","--","--"]
["MS01G13520",1.6373,1.546,2.4579,2.633,2.645,3.2104,2.1566,0.6783,2.0254,4.8647,2.4754,4.9483,2.8229,3.3231,3.5624,17,16,25,20,24,28,17,5,19,41,22,52,23,27,29,1.324733759,0.003805281,0.009335812,"up",1.078495051,0.009763796,0.018576053,"up",0.806729199,0.06441,0.099834327,false,"NA","NA","NA","NA",-1.232213084,0.025794523,0.067245375,false,-0.982509888,0.053748808,0.151522327,false,-0.729779406,0.166413692,0.621448926,false,-0.498008689,0.255357694,0.43903088,false,-0.246121539,0.525518245,0.776000996,false,"chr_001",12825946,12826389,"-","MS01G13520","--","--","--","uncharacterized protein LOC108170763 [Malus domestica]","--","A0A540LE27_MALBA RecName: Full=FBA_1 domain-containing protein {ECO:0000259|Pfam:PF07734};","--","GO:0004112,cyclic-nucleotide phosphodiesterase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008081,phosphoric diester hydrolase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0042578,phosphoric ester hydrolase activity","PF07734.16:F-box associated","--","--","--"]
["MS01G13530",1.4605,1.9537,1.988,3.1057,2.6927,3.4775,3.4201,2.2859,2.6944,2.799,4.7398,3.2871,2.8953,4.3551,3.2083,18,24,24,28,29,36,32,20,30,28,50,41,28,42,31,1.183624964,0.002314746,0.005979811,"up",1.24552779,0.001318819,0.003029787,"up",0.992005446,0.010936426,0.020666945,false,0.922580148,0.026212428,0.045259415,false,-0.250218977,0.520700777,0.662621014,false,-0.308490141,0.423270225,0.615378103,false,-0.072125968,0.848719925,0.965074855,false,-0.176430831,0.635606225,0.782978386,false,-0.228405265,0.528726785,0.778251236,false,"chr_001",12826536,12827283,"-","MS01G13530","--","--","--","F-box protein At1g30790-like [Malus sylvestris]","FBX8_ARATH RecName: Full=F-box only protein 8;","A0A5N5GTW2_9ROSA RecName: Full=F-box domain-containing protein {ECO:0000259|SMART:SM00256};","--","--","PF00646.36:F-box domain","--","--","--"]
["MS01G13590",35.0131,36.7268,30.9053,8.0742,9.8173,6.0158,5.2065,6.074,10.1424,7.1109,7.9502,10.1634,6.8689,6.0559,5.8437,1559,1630,1348,263,382,225,176,192,408,257,303,458,240,211,204,-1.83968847,"5.91565E-25","2.00935E-23","down",-2.159179814,"2.82463E-41","1.47145E-39","down",-1.87836822,"4.24816E-15","4.60465E-14","down",-1.98845734,"3.24984E-16","3.37108E-15","down",-0.131978936,0.635208597,0.756011875,false,0.189068713,0.478293628,0.664228106,false,-0.112705707,0.725549895,0.930550388,false,-0.017421525,0.948303026,0.974266105,false,0.307982833,0.232079659,0.517553968,false,"chr_001",13130604,13132507,"+","MS01G13590","--","K13448 calcium-binding protein CML | (RefSeq) calmodulin-like protein 3 (A)","ko04626: Plant-pathogen interaction","calmodulin-like protein 7 [Malus sylvestris]","CML3_ARATH RecName: Full=Calmodulin-like protein 3;","A0A498HW20_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74404.1};","Calmodulin and related proteins (EF-Hand superfamily)","GO:0005777,peroxisome; GO:0005509,calcium ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0042579,microbody; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00036.35:EF hand","--","--","--"]
["MS01G13600",18.3675,18.4273,19.1783,33.1309,33.8207,30.7252,30.3365,26.463,33.5842,23.7259,28.1931,26.3553,27.8478,26.2852,26.3015,701,701,717,925,1128,985,879,717,1158,735,921,1018,834,785,787,0.668726194,"5.10894E-09","3.78762E-08",false,0.816566785,"9.33372E-12","6.76374E-11",false,1.021178673,"2.89511E-13","2.60682E-12","up",0.972732542,"6.13686E-13","4.77811E-12",false,0.316871745,0.023456636,0.062248618,false,0.171989382,0.227992185,0.415408726,false,-0.051201099,0.749879096,0.938077142,false,0.369965125,0.012372835,0.047539854,false,0.230677847,0.118070767,0.356075021,false,"chr_001",13132726,13135718,"-","MS01G13600","--","--","--","uncharacterized protein LOC126602611 isoform X2 [Malus sylvestris]","--","A0A498HXU9_MALDO RecName: Full=CUE domain-containing protein {ECO:0000259|PROSITE:PS51140};","--","GO:0043130,ubiquitin binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0032182,ubiquitin-like protein binding","PF02845.19:CUE domain","--","--","--"]
["MS01G13650",2.6029,4.6631,3.8718,0.305,0.8935,1.4165,0.9306,0.3143,0.8643,4.4436,5.9949,5.6213,2.1797,4.6093,3.6519,70,125,102,6,21,32,19,6,21,97,138,153,46,97,77,0.712504091,0.008896074,0.019800248,false,0.195837242,0.565990487,0.641088354,false,-1.874311209,0.000146494,0.000402869,"down",-2.108461894,"1.46092E-06","5.38233E-06","down",-2.803326944,"7.76478E-14","2.22121E-12","down",-2.28920098,"6.70364E-07","1.27762E-05","down",-0.239989815,0.722726904,0.929783863,false,-2.565429874,"4.50068E-09","1.31576E-07","down",-2.044183207,"5.88604E-05",0.001436173,"down","chr_001",13288163,13289830,"+","MS01G13650","--","K14484 auxin-responsive protein IAA | (RefSeq) auxin-responsive protein IAA20-like (A)","ko04075: Plant hormone signal transduction","hypothetical protein DVH24_029134 [Malus domestica]","IAA29_ARATH RecName: Full=Auxin-responsive protein IAA29; AltName: Full=Indoleacetic acid-induced protein 29;","A0A498HZR0_MALDO RecName: Full=Auxin-responsive protein {ECO:0000256|RuleBase:RU004549};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0009734,auxin-activated signaling pathway; GO:0009733,response to auxin; GO:0010583,response to cyclopentenone; GO:0010218,response to far red light; GO:0009635,response to herbicide; GO:0010114,response to red light; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0014070,response to organic cyclic compound; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009639,response to red or far red light; GO:0006950,response to stress; GO:0009636,response to toxic substance; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02309.19:AUX/IAA family","AUX/IAA","TR","AUX/IAA"]
["MS01G13690",28.2824,24.1909,27.5514,14.5672,25.0073,15.3296,18.7155,34.7806,20.9625,12.9146,10.4201,10.415,15.4009,10.1151,15.0697,1465,1249,1398,552,1132,667,736,1279,981,543,462,546,626,410,612,-1.054257223,"6.18216E-10","5.19298E-09","down",-0.684840713,0.000525093,0.001305088,false,-0.316826541,0.224856482,0.295502986,false,0.1859224,0.471832686,0.552595166,false,1.252105531,"8.29102E-06","6.24778E-05","up",0.885498085,0.002047987,0.011983382,false,0.497944764,0.140620787,0.595103932,false,0.756446892,0.007635919,0.0325369,false,0.396397715,0.180728447,0.452809464,false,"chr_001",13330012,13335167,"+","MS01G13690","--","--","--","topless-related protein 4 [Malus domestica]","TPR4_ARATH RecName: Full=Topless-related protein 4; AltName: Full=WUS-interacting protein 2;","A0A498HSJ8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74416.1};","WD40 repeat-containing protein","GO:0005634,nucleus; GO:0003714,transcription corepressor activity; GO:0010336,gibberellic acid homeostasis; GO:0009938,negative regulation of gibberellic acid mediated signaling pathway; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:0010072,primary shoot apical meristem specification; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003712,transcription coregulator activity; GO:0140110,transcription regulator activity; GO:0008150,biological_process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0055088,lipid homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009739,response to gibberellin; GO:0009740,gibberellic acid mediated signaling pathway; GO:0009755,hormone-mediated signaling pathway; GO:0009937,regulation of gibberellic acid mediated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010476,gibberellin mediated signaling pathway; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0023057,negative regulation of signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0010467,gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0009793,embryo development ending in seed dormancy; GO:0009888,tissue development; GO:0009933,meristem structural organization; GO:0010014,meristem initiation; GO:0010016,shoot system morphogenesis; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048367,shoot system development; GO:0048507,meristem development; GO:0048508,embryonic meristem development; GO:0048532,anatomical structure arrangement; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090421,embryonic meristem initiation; GO:0006351,DNA-templated transcription; GO:0010468,regulation of gene expression; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00400.35:WD domain, G-beta repeat","--","--","--"]
["MS01G13700",65.5283,53.2084,62.399,34.5104,60.6519,31.1422,45.4118,80.3578,40.6882,34.9199,23.0164,23.8167,34.5001,22.8006,34.7801,2009,1626,1874,774,1625,802,1057,1749,1127,869,604,739,830,547,836,-0.951164802,"1.98373E-05","8.09462E-05",false,-0.681785678,0.000731594,0.001771964,false,-0.289835509,0.324088404,0.403245632,false,0.171831362,0.53940575,0.616493317,false,1.135269177,0.000423446,0.002058248,"up",0.867263296,0.004105157,0.020936603,false,0.455260814,0.220880126,0.677982008,false,0.681782003,0.041155112,0.119223406,false,0.420719906,0.189637256,0.463868601,false,"chr_001",13335196,13338348,"+","MS01G13700","--","--","--","topless-related protein 4 [Malus domestica]","TPR4_ARATH RecName: Full=Topless-related protein 4; AltName: Full=WUS-interacting protein 2;","A0A498HSJ8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74416.1};","WD40 repeat-containing protein","GO:0005634,nucleus; GO:0003714,transcription corepressor activity; GO:0010336,gibberellic acid homeostasis; GO:0009938,negative regulation of gibberellic acid mediated signaling pathway; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:0010072,primary shoot apical meristem specification; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003712,transcription coregulator activity; GO:0140110,transcription regulator activity; GO:0008150,biological_process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0055088,lipid homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009739,response to gibberellin; GO:0009740,gibberellic acid mediated signaling pathway; GO:0009755,hormone-mediated signaling pathway; GO:0009937,regulation of gibberellic acid mediated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010476,gibberellin mediated signaling pathway; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0023057,negative regulation of signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0010467,gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0009793,embryo development ending in seed dormancy; GO:0009888,tissue development; GO:0009933,meristem structural organization; GO:0010014,meristem initiation; GO:0010016,shoot system morphogenesis; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048367,shoot system development; GO:0048507,meristem development; GO:0048508,embryonic meristem development; GO:0048532,anatomical structure arrangement; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090421,embryonic meristem initiation; GO:0006351,DNA-templated transcription; GO:0010468,regulation of gene expression; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00400.35:WD domain, G-beta repeat","--","--","--"]
["MS01G13730",8.2888,8.9406,9.7577,2.587,2.6316,3.2797,2.1141,3.0707,2.7577,3.4826,5.2617,2.9351,3.6329,2.2042,3.1472,346,372,399,79,96,115,67,91,104,118,188,124,119,72,103,-1.028674099,"1.31132E-05","5.53266E-05","down",-1.290188386,"8.15806E-09","4.21267E-08","down",-1.452583776,"1.22718E-14","1.27229E-13","down",-1.482277623,"1.04298E-12","7.90939E-12","down",-0.441936574,0.142458604,0.2586896,false,-0.174876711,0.548234862,0.721108302,false,-0.028924153,0.911095692,0.978665816,false,-0.411433957,0.153967983,0.31161337,false,-0.137850521,0.61755031,0.831136659,false,"chr_001",13348534,13351251,"+","MS01G13730","--","K11662 actin-related protein 6 | (RefSeq) actin-related protein 6-like (A)","ko03082: ATP-dependent chromatin remodeling","actin-related protein 6-like [Malus domestica]","ARP6_ARATH RecName: Full=Actin-related protein 6; AltName: Full=Protein EARLY IN SHORT DAYS 1; AltName: Full=Protein SUPPRESSOR OF FRIGIDA 3;","A0A5N5H623_9ROSA SubName: Full=Actin-related protein 6-like {ECO:0000313|EMBL:KAB2618604.1};","Actin and related proteins","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0000812,Swr1 complex; GO:0031491,nucleosome binding; GO:0005200,structural constituent of cytoskeleton; GO:0030029,actin filament-based process; GO:0051301,cell division; GO:0006338,chromatin remodeling; GO:0006952,defense response; GO:0016573,histone acetylation; GO:0043486,histone exchange; GO:0016571,histone methylation; GO:0009910,negative regulation of flower development; GO:0006355,regulation of DNA-templated transcription; GO:0006970,response to osmotic stress; GO:0009266,response to temperature stimulus; GO:0009845,seed germination; GO:0003674,molecular_function; GO:0003682,chromatin binding; GO:0005488,binding; GO:0044877,protein-containing complex binding; GO:0005198,structural molecule activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0006325,chromatin organization; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0006473,protein acetylation; GO:0006475,internal protein amino acid acetylation; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016570,histone modification; GO:0018193,peptidyl-amino acid modification; GO:0018205,peptidyl-lysine modification; GO:0018393,internal peptidyl-lysine acetylation; GO:0018394,peptidyl-lysine acetylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043543,protein acylation; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0034728,nucleosome organization; GO:0043933,protein-containing complex organization; GO:0071824,protein-DNA complex subunit organization; GO:0006479,protein methylation; GO:0008213,protein alkylation; GO:0032259,methylation; GO:0043414,macromolecule methylation; GO:0044237,cellular metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0009909,regulation of flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048519,negative regulation of biological process; GO:0048580,regulation of post-embryonic development; GO:0048581,negative regulation of post-embryonic development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048831,regulation of shoot system development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051093,negative regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0051241,negative regulation of multicellular organismal process; GO:0061458,reproductive system development; GO:0065007,biological regulation; GO:0090567,reproductive shoot system development; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:2000242,negative regulation of reproductive process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009628,response to abiotic stimulus; GO:0090351,seedling development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0000118,histone deacetylase complex; GO:0000228,nuclear chromosome; GO:0000785,chromatin; GO:0005654,nucleoplasm; GO:0005694,chromosome; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0070603,SWI/SNF superfamily-type complex; GO:0097346,INO80-type complex; GO:0140513,nuclear protein-containing complex; GO:1902494,catalytic complex; GO:1904949,ATPase complex","PF00022.22:Actin","--","--","--"]
["MS01G13740",9.4668,8.266,10.4632,3.3,4.8084,3.5507,4.0588,5.4895,3.73,5.7249,5.015,5.0392,5.1659,3.6642,4.5188,1149,1000,1244,293,510,362,374,473,409,564,521,619,492,348,430,-0.646348828,"4.5842E-05",0.000174797,false,-0.782271981,"1.75048E-05","5.6347E-05",false,-1.049831829,"1.38041E-06","5.32741E-06","down",-0.79683065,0.000149879,0.000401739,false,-0.138761389,0.527865892,0.668474813,false,{"v":-6.4656e-05,"d":"-6.47E-05"},0.999779404,0.999887801,false,0.248889013,0.353311156,0.780006324,false,-0.385025885,0.093348843,0.219725838,false,-0.240020568,0.329892724,0.621441847,false,"chr_001",13350597,13359172,"-","MS01G13740","--","K24260 WD repeat-containing protein 11 | (RefSeq) WD repeat-containing protein 11-like isoform X1 (A)","--","WD repeat-containing protein 11-like isoform X2 [Malus domestica]","ARP6_ARATH RecName: Full=Actin-related protein 6; AltName: Full=Protein EARLY IN SHORT DAYS 1; AltName: Full=Protein SUPPRESSOR OF FRIGIDA 3;","A0A498KTK4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI09714.1};","WD40 repeat protein","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0000812,Swr1 complex; GO:0031491,nucleosome binding; GO:0005200,structural constituent of cytoskeleton; GO:0030029,actin filament-based process; GO:0051301,cell division; GO:0006338,chromatin remodeling; GO:0006952,defense response; GO:0016573,histone acetylation; GO:0043486,histone exchange; GO:0016571,histone methylation; GO:0009910,negative regulation of flower development; GO:0006355,regulation of DNA-templated transcription; GO:0006970,response to osmotic stress; GO:0009266,response to temperature stimulus; GO:0009845,seed germination; GO:0003674,molecular_function; GO:0003682,chromatin binding; GO:0005488,binding; GO:0044877,protein-containing complex binding; GO:0005198,structural molecule activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0006325,chromatin organization; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0006473,protein acetylation; GO:0006475,internal protein amino acid acetylation; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016570,histone modification; GO:0018193,peptidyl-amino acid modification; GO:0018205,peptidyl-lysine modification; GO:0018393,internal peptidyl-lysine acetylation; GO:0018394,peptidyl-lysine acetylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043543,protein acylation; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0034728,nucleosome organization; GO:0043933,protein-containing complex organization; GO:0071824,protein-DNA complex subunit organization; GO:0006479,protein methylation; GO:0008213,protein alkylation; GO:0032259,methylation; GO:0043414,macromolecule methylation; GO:0044237,cellular metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0009909,regulation of flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048519,negative regulation of biological process; GO:0048580,regulation of post-embryonic development; GO:0048581,negative regulation of post-embryonic development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048831,regulation of shoot system development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051093,negative regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0051241,negative regulation of multicellular organismal process; GO:0061458,reproductive system development; GO:0065007,biological regulation; GO:0090567,reproductive shoot system development; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:2000242,negative regulation of reproductive process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009628,response to abiotic stimulus; GO:0090351,seedling development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0000118,histone deacetylase complex; GO:0000228,nuclear chromosome; GO:0000785,chromatin; GO:0005654,nucleoplasm; GO:0005694,chromosome; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0070603,SWI/SNF superfamily-type complex; GO:0097346,INO80-type complex; GO:0140513,nuclear protein-containing complex; GO:1902494,catalytic complex; GO:1904949,ATPase complex","PF12894.10:Anaphase-promoting complex subunit 4 WD40 domain","--","--","--"]
["MS01G13760",43.2141,30.7431,17.6317,3.3797,15.6599,3.4408,3.8987,15.0094,7.6701,14.8434,6.9567,6.2276,5.547,6.0076,10.2598,1241,880,496,71,393,83,85,306,199,346,171,181,125,135,231,-1.510705139,0.000264971,0.000862732,"down",-1.790125978,"2.16971E-07","9.27716E-07","down",-1.785835881,0.031582202,0.053195401,false,-1.504943201,0.001058167,0.002447557,"down",0.021822496,0.96565826,0.980535783,false,0.300630769,0.500212262,0.682731144,false,0.273544183,0.76556334,0.941983614,false,-0.250654482,0.685403924,0.818465472,false,0.036422143,0.94962225,0.984297888,false,"chr_001",13383772,13385642,"-","MS01G13760","--","--","--","uclacyanin-3-like [Malus sylvestris]","BCP_PETHY RecName: Full=Blue copper protein {ECO:0000303|PubMed:25971550}; Short=PhBcp {ECO:0000303|PubMed:25971550}; Flags: Precursor;","A0A540MFM5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97209.1};","--","GO:0016021,integral component of membrane; GO:0009055,electron transfer activity; GO:0046872,metal ion binding; GO:0009610,response to symbiotic fungus; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009608,response to symbiont; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF02298.20:Plastocyanin-like domain","--","--","--"]
["MS01G13770",54.667,51.8764,44.8033,92.8807,281.7021,55.4778,208.5024,262.5184,99.9647,203.6952,87.9817,115.3035,124.1142,61.4885,109.5322,1552,1468,1246,1929,6989,1323,4494,5291,2564,4694,2138,3313,2765,1366,2438,1.63113964,"1.90243E-07","1.10994E-06","up",1.257896524,"1.02975E-06","4.02217E-06","up",1.752655008,0.017669578,0.03172812,"up",2.213667078,"1.9888E-11","1.3278E-10","up",0.595477066,0.149699669,0.268797017,false,0.968095319,0.008652714,0.0380981,false,0.447571144,0.580916906,0.88484826,false,0.147096734,0.849774488,0.920074196,false,0.527563294,0.505545482,0.761959277,false,"chr_001",13391221,13392944,"-","MS01G13770","--","--","--","hypothetical protein C1H46_017297 [Malus baccata]","ENL1_ARATH RecName: Full=Early nodulin-like protein 1; AltName: Full=Phytocyanin-like protein; Flags: Precursor;","A0A540MEN7_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97208.1};","--","GO:0031225,anchored component of membrane; GO:0046658,anchored component of plasma membrane; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0099503,secretory vesicle; GO:0005773,vacuole; GO:0009055,electron transfer activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0031226,intrinsic component of plasma membrane; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle","PF02298.20:Plastocyanin-like domain","--","--","--"]
["MS01G13800",29.1033,33.4667,30.1442,19.2519,20.5953,27.5557,18.4385,12.5862,16.6719,35.8023,44.5892,50.9117,24.2374,35.996,30.9882,684,784,694,331,423,544,329,210,354,683,897,1211,447,662,571,0.685284946,"2.76072E-05",0.000110023,false,0.265791135,0.130959715,0.185434185,false,-0.250804753,0.162583261,0.223475082,false,-0.676471494,0.000366621,0.000919179,false,-1.348699825,"7.36406E-11","1.42205E-09","down",-0.927574919,"2.16272E-05",0.000264935,false,-0.428018915,0.051424699,0.407587177,false,-0.918519592,"3.65381E-06","5.16795E-05",false,-0.491813948,0.020479285,0.118259337,false,"chr_001",13465953,13467956,"+","MS01G13800","--","--","--","thylakoid lumenal 16.5 kDa protein, chloroplastic [Pyrus x bretschneideri]","TL16_ARATH RecName: Full=Thylakoid lumenal 16.5 kDa protein, chloroplastic; Flags: Precursor;","A0A5N5H633_9ROSA SubName: Full=Thylakoid lumenal 16.5 kDa protein {ECO:0000313|EMBL:KAB2618614.1};","--","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0009534,chloroplast thylakoid; GO:0009543,chloroplast thylakoid lumen; GO:0009535,chloroplast thylakoid membrane; GO:0005829,cytosol; GO:0009579,thylakoid; GO:0031977,thylakoid lumen; GO:0010206,photosystem II repair; GO:0006091,generation of precursor metabolites and energy; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009765,photosynthesis, light harvesting; GO:0009987,cellular process; GO:0015979,photosynthesis; GO:0019538,protein metabolic process; GO:0019684,photosynthesis, light reaction; GO:0030091,protein repair; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0031978,plastid thylakoid lumen; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane","--","--","--","--"]
["MS01G13830",7.8162,9.1278,4.7283,1.8655,1.9876,3.3479,1.5252,1.1068,2.5176,4.993,6.281,4.1271,2.3189,3.6466,4.5363,189,220,112,33,42,68,28,19,55,98,130,101,44,69,86,-0.315825941,0.308845195,0.40626238,false,-0.763370918,0.024414455,0.042230602,false,-1.388329411,0.000129249,0.000358924,"down",-1.796955759,"2.84207E-06","1.00322E-05","down",-1.464284664,"4.90799E-05",0.000305336,"down",-1.015184712,0.011567056,0.047641706,"down",-0.407570543,0.335506712,0.769805697,false,-1.055993045,0.001321541,0.007861395,"down",-0.600689048,0.104481845,0.332570943,false,"chr_001",13534907,13539414,"+","MS01G13830","--","K25796 plant-specific transcription factor YABBY family protein | (RefSeq) axial regulator YABBY 5-like (A)","--","axial regulator YABBY 5-like [Malus domestica]","YAB5_ARATH RecName: Full=Axial regulator YABBY 5;","A0A498HUV6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74429.1};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0000976,transcription cis-regulatory region binding; GO:0010158,abaxial cell fate specification; GO:0045165,cell fate commitment; GO:0009944,polarity specification of adaxial/abaxial axis; GO:2000024,regulation of leaf development; GO:1902183,regulation of shoot apical meristem development; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0001708,cell fate specification; GO:0008150,biological_process; GO:0009987,cellular process; GO:0030154,cell differentiation; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0003002,regionalization; GO:0007275,multicellular organism development; GO:0007389,pattern specification process; GO:0009798,axis specification; GO:0009943,adaxial/abaxial axis specification; GO:0009955,adaxial/abaxial pattern specification; GO:0032501,multicellular organismal process; GO:0048856,anatomical structure development; GO:0065001,specification of axis polarity; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0065007,biological regulation; GO:0099402,plant organ development; GO:0009888,tissue development; GO:0048507,meristem development; GO:0048509,regulation of meristem development; GO:1902182,shoot apical meristem development; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF04690.16:YABBY protein","C2C2-YABBY","TF","C2C2->C2C2-YABBY"]
["MS01G13840",17.844,17.1204,22.2552,51.4367,39.5443,55.7814,44.3512,29.0087,44.4734,33.6904,42.6399,46.2062,47.1538,51.7765,49.1828,1168,1117,1427,2463,2262,3067,2204,1348,2630,1790,2389,3061,2422,2652,2524,1.283802195,"3.86889E-15","5.89025E-14","up",1.666686154,"1.12933E-34","4.32085E-33","up",1.570174634,"3.64152E-19","5.73289E-18","up",1.324671065,"6.64243E-11","4.19559E-10","up",0.053246789,0.798615833,0.874476574,false,-0.326733763,0.084688376,0.209772774,false,-0.247026296,0.246215335,0.701371759,false,0.302774894,0.085323205,0.205958318,false,-0.072128634,0.631187524,0.838649151,false,"chr_001",13553753,13559125,"-","MS01G13840","--","--","--","nuclear pore complex protein NUP1 [Malus sylvestris]","NUP1_ARATH RecName: Full=Nuclear pore complex protein NUP1 {ECO:0000303|PubMed:19843313}; AltName: Full=Nuclear pore complex protein NUP136 {ECO:0000303|PubMed:21189294}; AltName: Full=Nucleoporin 1 {ECO:0000303|PubMed:19843313}; AltName: Full=Nucleoporin 136 {ECO:0000303|PubMed:21189294};","A0A498HZ49_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74431.1};","--","GO:0005829,cytosol; GO:0005635,nuclear envelope; GO:0034399,nuclear periphery; GO:0005643,nuclear pore; GO:0071763,nuclear membrane organization; GO:0006997,nucleus organization; GO:0016973,poly(A)+ mRNA export from nucleus; GO:0015031,protein transport; GO:0006996,organelle organization; GO:0006998,nuclear envelope organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0010256,endomembrane system organization; GO:0016043,cellular component organization; GO:0061024,membrane organization; GO:0071840,cellular component organization or biogenesis; GO:0006403,RNA localization; GO:0006405,RNA export from nucleus; GO:0006406,mRNA export from nucleus; GO:0006810,transport; GO:0006913,nucleocytoplasmic transport; GO:0008152,metabolic process; GO:0010467,gene expression; GO:0015931,nucleobase-containing compound transport; GO:0033036,macromolecule localization; GO:0043170,macromolecule metabolic process; GO:0046907,intracellular transport; GO:0050657,nucleic acid transport; GO:0050658,RNA transport; GO:0051028,mRNA transport; GO:0051168,nuclear export; GO:0051169,nuclear transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051236,establishment of RNA localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0071702,organic substance transport; GO:0071704,organic substance metabolic process; GO:0071705,nitrogen compound transport; GO:0008104,protein localization; GO:0045184,establishment of protein localization; GO:0070727,cellular macromolecule localization; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0005634,nucleus; GO:0012505,endomembrane system; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0032991,protein-containing complex; GO:0140513,nuclear protein-containing complex","--","--","--","--"]
["MS01G13860",3.195,2.5185,1.8346,8.3839,7.2141,7.8789,8.2664,10.0859,7.7359,4.9553,3.6327,4.9326,4.9077,5.5412,4.2935,112,88,63,215,221,232,220,251,245,141,109,175,135,152,118,1.028842406,0.000478836,0.001467394,"up",1.253424043,"3.71986E-06","1.33439E-05","up",1.845966036,"1.39854E-12","1.17211E-11","up",2.070227223,"3.02964E-14","2.66978E-13","up",1.055270103,"1.07984E-05","7.92401E-05","up",0.830235504,0.000150416,0.001376478,false,0.221922815,0.279541579,0.727128869,false,0.836007773,0.000164295,0.001386397,false,0.617042555,0.001819794,0.020969306,false,"chr_001",13589683,13593932,"+","MS01G13860","--","K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11] | (RefSeq) CBL-interacting serine/threonine-protein kinase 1-like (A)","--","CBL-interacting serine/threonine-protein kinase 24-like isoform X2 [Malus domestica]","CIPKO_ARATH RecName: Full=CBL-interacting serine/threonine-protein kinase 24; EC=2.7.11.1; AltName: Full=Protein SALT OVERLY SENSITIVE 2; AltName: Full=SNF1-related kinase 3.11;","A0A0U2SHW7_MALDO RecName: Full=Non-specific serine/threonine protein kinase {ECO:0000256|ARBA:ARBA00012513}; EC=2.7.11.1 {ECO:0000256|ARBA:ARBA00012513};","Serine/threonine protein kinase","GO:0005634,nucleus; GO:0009705,plant-type vacuole membrane; GO:0005524,ATP binding; GO:0004672,protein kinase activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0035556,intracellular signal transduction; GO:0006468,protein phosphorylation; GO:0009651,response to salt stress; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0000325,plant-type vacuole; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle","PF00069.28:Protein kinase domain","--","--","--"]
["MS01G13870",18.5238,22.2075,23.5474,52.9574,93.4731,74.3032,78.0291,95.3488,61.8069,87.1301,75.802,78.0206,87.1249,81.0412,89.3969,1313,1569,1635,2746,5790,4424,4199,4798,3958,5013,4599,5597,4846,4495,4968,2.098814856,"3.28673E-43","3.34918E-41","up",2.297258721,"4.14172E-68","5.90985E-66","up",2.001796644,"1.76113E-16","2.17124E-15","up",2.164830342,"3.10966E-24","5.55965E-23","up",0.077773306,0.717415929,0.81722078,false,-0.119031721,0.552418254,0.725124293,false,0.15673099,0.580365921,0.88484826,false,-0.077473834,0.753218975,0.862544961,false,-0.267270491,0.259813477,0.549336018,false,"chr_001",13597805,13601368,"-","MS01G13870","--","K14515 EIN3-binding F-box protein | (RefSeq) EIN3-binding F-box protein 1-like (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction","hypothetical protein DVH24_029157 [Malus domestica]","EBF1_ARATH RecName: Full=EIN3-binding F-box protein 1; AltName: Full=F-box/LRR-repeat protein 6;","A0A498HSL9_MALDO RecName: Full=F-box domain-containing protein {ECO:0000259|SMART:SM00256};","Leucine rich repeat proteins, some proteins contain F-box","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0019005,SCF ubiquitin ligase complex; GO:0009873,ethylene-activated signaling pathway; GO:0010105,negative regulation of ethylene-activated signaling pathway; GO:0016567,protein ubiquitination; GO:0009723,response to ethylene; GO:0031146,SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0010104,regulation of ethylene-activated signaling pathway; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023057,negative regulation of signaling; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0070297,regulation of phosphorelay signal transduction system; GO:0070298,negative regulation of phosphorelay signal transduction system; GO:1902531,regulation of intracellular signal transduction; GO:1902532,negative regulation of intracellular signal transduction; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006508,proteolysis; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0010498,proteasomal protein catabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0000151,ubiquitin ligase complex; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0032991,protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF13516.9:Leucine Rich repeat","--","--","--"]
["MS01G13900",10.4694,13.5928,11.3437,12.2617,8.9162,7.2041,10.4749,14.257,19.2348,4.5193,2.878,3.1483,5.562,6.5015,5.7035,391,506,415,335,291,226,297,378,649,137,92,119,163,190,167,-1.555230522,"3.148E-10","2.75227E-09","down",-0.703268245,"9.87536E-05",0.000280173,false,-0.100426526,0.696643227,0.754416112,false,0.587274707,0.013553939,0.025034437,false,2.156782413,"2.16992E-13","5.90975E-12","up",1.308675327,"6.32748E-08","1.53462E-06","up",0.688173157,0.021034196,0.282980151,false,1.472023168,"2.24837E-06","3.36449E-05","up",0.627809756,0.014202109,0.091599017,false,"chr_001",13624387,13626087,"-","MS01G13900","--","--","--","uncharacterized protein LOC103431472 [Malus domestica]","--","A0A540MEN4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97191.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G13950",12.7863,13.3476,22.0742,29.78,12.9646,13.3337,18.9311,23.4369,16.0517,10.5283,8.1687,10.9067,13.8606,13.6513,10.1981,395,411,668,673,350,346,444,514,448,264,216,341,336,330,247,-0.505849132,0.050541397,0.089172418,false,-0.053423242,0.829567889,0.868344558,false,0.441507445,0.236181317,0.30796972,false,0.573527593,0.030377323,0.05162375,false,1.090820494,"3.94198E-06","3.23349E-05","up",0.63955126,0.005543763,0.026597184,false,0.132128683,0.711686211,0.92597616,false,0.964231531,0.006644169,0.029012156,false,0.518064779,0.134812961,0.384914057,false,"chr_001",13705953,13708844,"+","MS01G13950","--","--","--","SPX domain-containing protein 1 [Malus domestica]","SPX1_ARATH RecName: Full=SPX domain-containing protein 1 {ECO:0000303|PubMed:18315545}; AltName: Full=Protein SPX DOMAIN GENE 1 {ECO:0000303|PubMed:18315545}; Short=AtSPX1 {ECO:0000303|PubMed:18315545};","A0A540MEL8_MALBA RecName: Full=SPX domain-containing protein {ECO:0000259|PROSITE:PS51382};","Protein involved in vacuolar polyphosphate accumulation, contains SPX domain","GO:0005634,nucleus; GO:0071456,cellular response to hypoxia; GO:0016036,cellular response to phosphate starvation; GO:0080040,positive regulation of cellular response to phosphate starvation; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0007154,cell communication; GO:0009267,cellular response to starvation; GO:0009605,response to external stimulus; GO:0009991,response to extracellular stimulus; GO:0031667,response to nutrient levels; GO:0031668,cellular response to extracellular stimulus; GO:0031669,cellular response to nutrient levels; GO:0042594,response to starvation; GO:0071496,cellular response to external stimulus; GO:0010646,regulation of cell communication; GO:0010647,positive regulation of cell communication; GO:0032101,regulation of response to external stimulus; GO:0032103,positive regulation of response to external stimulus; GO:0032104,regulation of response to extracellular stimulus; GO:0032106,positive regulation of response to extracellular stimulus; GO:0032107,regulation of response to nutrient levels; GO:0032109,positive regulation of response to nutrient levels; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0080135,regulation of cellular response to stress; GO:0140255,regulation of cellular response to phosphate starvation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03105.22:SPX domain","--","--","--"]
["MS01G13960",11.8232,11.5311,14.8032,1.1263,0.7071,0.5885,1.1938,0.8124,1.1856,2.6899,3.0321,1.5468,0.735,1.3161,1.6814,287,279,352,20,15,12,22,14,26,53,63,38,14,25,32,-2.212836885,"1.40999E-15","2.23175E-14","down",-3.062165387,"2.26501E-26","5.3308E-25","down",-3.776299978,"6.5064E-33","2.68049E-31","down",-3.287606063,"5.53084E-32","1.57156E-30","down",-1.07229178,0.011603352,0.034761106,"down",-0.213116186,0.650762548,0.794833914,false,0.472390516,0.341690342,0.773156058,false,-1.544871536,0.001116637,0.006840303,"down",-0.677372053,0.19347762,0.469105376,false,"chr_001",13710129,13711834,"+","MS01G13960","--","K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 25 (A)","ko00940: Phenylpropanoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","peroxidase 25 [Malus domestica]","PER25_ARATH RecName: Full=Peroxidase 25; Short=Atperox P25; EC=1.11.1.7; Flags: Precursor;","A0A5N5H652_9ROSA RecName: Full=Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}; EC=1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060};","--","GO:0005576,extracellular region; GO:0009505,plant-type cell wall; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0004601,peroxidase activity; GO:0042744,hydrogen peroxide catabolic process; GO:0006979,response to oxidative stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016209,antioxidant activity; GO:0016491,oxidoreductase activity; GO:0016684,oxidoreductase activity, acting on peroxide as acceptor; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009987,cellular process; GO:0042743,hydrogen peroxide metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0072593,reactive oxygen species metabolic process; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0005618,cell wall; GO:0030312,external encapsulating structure; GO:0071944,cell periphery","PF00141.26:Peroxidase","--","--","--"]
["MS01G14150",4.6696,3.4887,3.773,7.0351,8.8223,5.5827,6.8312,8.117,6.7082,7.0992,3.575,5.8508,6.3052,6.9832,7.7554,235,175,186,259,388,236,261,290,305,290,154,298,249,275,306,0.667573837,0.026041034,0.050382257,false,1.108089212,"6.5088E-09","3.40387E-08","up",1.069380247,"5.03738E-05",0.00015024,"up",1.143414419,"4.85389E-08","2.17311E-07","up",0.491769135,0.094369746,0.189071618,false,0.049251573,0.788210669,0.882725773,false,0.070470478,0.785731351,0.94869907,false,0.423370532,0.202243305,0.375062435,false,-0.012091468,0.960801072,0.987851334,false,"chr_001",13946838,13949780,"-","MS01G14150","--","--","--","uncharacterized protein LOC103400440 [Malus domestica]","--","A0A540MEI9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97160.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF20479.1:TMEM128 protein","--","--","--"]
["MS01G14770",2.645,3.8541,4.5003,4.5627,4.2518,5.698,5.0601,4.2581,3.0671,5.9742,6.9897,8.0271,5.8587,5.7141,5.3819,42,61,70,53,59,76,61,48,44,77,95,129,73,71,67,1.122658955,"7.0084E-05",0.000258204,"up",0.921307924,0.001242657,0.002868201,false,0.613954053,0.048113496,0.077194107,false,0.460635594,0.192014455,0.258914474,false,-0.652873661,0.03152637,0.079223113,false,-0.44980512,0.139538439,0.298043163,false,-0.158697838,0.622404805,0.89987916,false,-0.491465911,0.05841805,0.155171066,false,-0.281060281,0.279530253,0.570756505,false,"chr_001",14648175,14655104,"+","MS01G14770","--","--","--","hypothetical protein D8674_014604 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5GT08_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2618735.1};","--","--","--","--","--","--"]
["MS01G15360",1.8613,1.8182,2.0501,0.1339,0,0.1749,0.1936,0.69,0.2169,0.9052,1.0873,0.3872,0.1873,0.3756,0.3124,38,37,41,2,0,3,3,10,4,15,19,8,3,6,5,-1.098270355,0.019450199,0.03919351,"down",-2.419535875,"1.21428E-05","4.02177E-05","down",-4.03781588,"3.31287E-07","1.39789E-06","down",-2.124738913,0.000301618,0.000768249,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",15265620,15267317,"-","MS01G15360","--","K04392 Ras-related C3 botulinum toxin substrate 1 | (RefSeq) rac-like GTP-binding protein ARAC7 (A)","ko04145: Phagosome","rac-like GTP-binding protein ARAC7 [Malus domestica]","RAC7_ARATH RecName: Full=Rac-like GTP-binding protein ARAC7; AltName: Full=GTPase protein ROP9;","A0A540M0J2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD92261.1};","Ras-related small GTPase, Rho type","GO:0005938,cell cortex; GO:0042995,cell projection; GO:0031410,cytoplasmic vesicle; GO:0005856,cytoskeleton; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0005525,GTP binding; GO:0003924,GTPase activity; GO:0019901,protein kinase binding; GO:0009738,abscisic acid-activated signaling pathway; GO:0007015,actin filament organization; GO:0030865,cortical cytoskeleton organization; GO:0007163,establishment or maintenance of cell polarity; GO:0032956,regulation of actin cytoskeleton organization; GO:0008360,regulation of cell shape; GO:0007264,small GTPase mediated signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0019001,guanyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0019900,kinase binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0016043,cellular component organization; GO:0030029,actin filament-based process; GO:0030036,actin cytoskeleton organization; GO:0071840,cellular component organization or biogenesis; GO:0097435,supramolecular fiber organization; GO:0032970,regulation of actin filament-based process; GO:0033043,regulation of organelle organization; GO:0051128,regulation of cellular component organization; GO:0051493,regulation of cytoskeleton organization; GO:0000902,cell morphogenesis; GO:0009653,anatomical structure morphogenesis; GO:0022603,regulation of anatomical structure morphogenesis; GO:0022604,regulation of cell morphogenesis; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0035556,intracellular signal transduction; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0016020,membrane","PF00071.25:Ras family","--","--","--"]
["MS01G16310",2.3235,2.1069,2.3719,3.6648,3.4769,3.4576,8.7694,7.364,7.666,4.514,5.0636,5.298,7.0039,3.5403,3.9894,52,47,52,60,68,65,149,117,155,82,97,120,123,62,70,1.316119097,"6.02959E-08","3.8187E-07","up",1.394742173,"3.94926E-05",0.000120022,"up",0.8548873,0.001671905,0.003754193,false,2.091007511,"2.50992E-18","3.04155E-17","up",0.786913315,0.00021484,0.001132234,false,0.712587291,0.021992857,0.077752493,false,1.233460634,"1.15678E-07","9.96851E-05","up",-0.443768429,0.067426433,0.172980945,false,-0.512555888,0.133546671,0.382599135,false,"chr_001",16474683,16476909,"+","MS01G16310","--","--","--","meiotic nuclear division protein 1 homolog isoform X1 [Malus sylvestris]","MND1_ARATH RecName: Full=Meiotic nuclear division protein 1 homolog; Short=AtMND1; AltName: Full=Meiotic nuclear division 1-like protein;","A0A540LMD0_MALBA RecName: Full=Meiotic nuclear division protein 1 homolog {ECO:0000256|PIRNR:PIRNR026991};","Protein involved in meiotic recombination/predicted coiled-coil protein","GO:0005730,nucleolus; GO:0005634,nucleus; GO:0003690,double-stranded DNA binding; GO:0006302,double-strand break repair; GO:0009553,embryo sac development; GO:0009555,pollen development; GO:0007131,reciprocal meiotic recombination; GO:0010212,response to ionizing radiation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006281,DNA repair; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0000003,reproduction; GO:0000280,nuclear division; GO:0006310,DNA recombination; GO:0006996,organelle organization; GO:0007049,cell cycle; GO:0007127,meiosis I; GO:0016043,cellular component organization; GO:0022402,cell cycle process; GO:0022414,reproductive process; GO:0035825,homologous recombination; GO:0048285,organelle fission; GO:0051321,meiotic cell cycle; GO:0061982,meiosis I cell cycle process; GO:0071840,cellular component organization or biogenesis; GO:0140013,meiotic nuclear division; GO:0140527,reciprocal homologous recombination; GO:1903046,meiotic cell cycle process; GO:0009314,response to radiation; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity","PF03962.18:Mnd1 HTH domain","--","--","--"]
["MS01G17660",7.2614,7.0152,2.3336,0.3676,0.0769,0.4002,0.2657,0,0.1488,0.8283,1.8067,1.3951,0,0.5155,0.343,108,104,34,4,1,5,3,0,2,10,23,21,0,6,4,-1.873269431,0.000336727,0.0010695,"down",-3.999571547,"2.57659E-08","1.24905E-07","down",-4.123340517,"7.80333E-09","4.17214E-08","down",-5.02967436,"2.6325E-09","1.38712E-08","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",17934266,17934901,"-","MS01G17660","--","--","--","uncharacterized protein LOC103400941 [Malus domestica]","--","A0A540LG14_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD85411.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS01G18020",0,0,0.018,0.4337,0.1008,0.3148,0.5804,0.0993,1.034,0.0217,0.2883,0.1045,0.4268,0.0901,0.3147,0,0,1,18,5,15,25,4,53,1,14,6,19,4,14,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",6.752000724,"2.46127E-06","8.78077E-06","up",2.162825889,0.022000694,0.0589911,false,1.031446694,0.197481968,0.377776753,false,1.088637926,0.177357286,0.635664742,false,"NA","NA","NA","NA",-0.052028249,0.945292782,0.983581415,false,"chr_001",18356846,18360721,"+","MS01G18020","--","K12309 beta-galactosidase [EC:3.2.1.23] | (RefSeq) beta-galactosidase 17 (A)","ko00052: Galactose metabolism; ko00511: Other glycan degradation; ko00531: Glycosaminoglycan degradation; ko00600: Sphingolipid metabolism; ko00604: Glycosphingolipid biosynthesis - ganglio series; ko01100: Metabolic pathways","hypothetical protein DVH24_029551 [Malus domestica]","BGAL_BRAOL RecName: Full=Beta-galactosidase; Short=Lactase; EC=3.2.1.23; Flags: Precursor;","A0A498HVM3_MALDO RecName: Full=Beta-galactosidase {ECO:0000256|ARBA:ARBA00012756, ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|ARBA:ARBA00012756, ECO:0000256|RuleBase:RU000675};","Beta-galactosidase","GO:0048046,apoplast; GO:0004565,beta-galactosidase activity; GO:0030246,carbohydrate binding; GO:0005975,carbohydrate metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0015925,galactosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0005488,binding; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF01301.22:Glycosyl hydrolases family 35","--","--","--"]
["MS01G18940",5.6704,7.4499,5.9433,0.4316,0.1734,0.2406,0.3992,0.4803,0.5731,0.6223,1.1803,0.8485,0.3541,0.7747,0.2255,449,588,461,25,12,16,24,27,41,40,80,68,22,48,14,-2.667138626,"5.6732E-27","2.26552E-25","down",-3.525542223,"1.16043E-23","2.25053E-22","down",-4.305623649,"4.67356E-40","2.80094E-38","down",-3.429199669,"2.00504E-41","8.79791E-40","down",-0.75093017,0.038888956,0.094088842,false,0.107121397,0.832021157,0.908157673,false,0.864753571,0.067699546,0.456454541,false,-1.61273231,0.000443984,0.003186181,"down",-0.742615827,0.213276434,0.494611462,false,"chr_001",19380926,19385820,"-","MS01G18940","--","--","--","uncharacterized protein LOC103400994 [Malus domestica]","--","A0A498I1B0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74903.1};","--","--","PF14309.9:Domain of unknown function (DUF4378)","--","--","--"]
["MS01G19860",1.4401,1.6217,0.57,0.0402,0,0,0,0.0414,0,0.1448,0.412,0.2323,0.0375,0,0.1125,49,55,19,1,0,0,0,1,0,4,12,8,1,0,3,-2.034690452,0.000900907,0.002575727,"down",-4.315885021,"3.45068E-06","1.24296E-05","down",-6.340187003,"1.84414E-06","6.98404E-06","down",-6.225731686,"2.53582E-06","9.02185E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",20324902,20326686,"-","MS01G19860","--","--","--","protein POLLENLESS 3-LIKE 2-like [Malus domestica]","MS5L2_ARATH RecName: Full=Protein POLLENLESS 3-LIKE 2 {ECO:0000303|Ref.5};","A0A498HZG1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74997.1};","--","GO:0005634,nucleus; GO:0007049,cell cycle; GO:0051301,cell division; GO:0008150,biological_process; GO:0009987,cellular process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00515.31:Tetratricopeptide repeat","--","--","--"]
["MS01G20920",2.3902,2.8951,2.321,0.3985,0.8005,0.5205,0.5759,0.1232,0.3549,1.3287,0.5789,0.9216,1.0401,1.2293,1.0038,82,99,78,10,24,15,15,3,11,37,17,32,28,33,27,-1.234407016,0.000914477,0.002610229,"down",-0.925567113,0.002017866,0.004466555,false,-1.913451109,"7.31968E-07","2.93754E-06","down",-2.561393303,"2.79654E-08","1.29732E-07","down",-1.321614945,0.039869655,0.095972858,false,-1.622283085,0.003074211,0.016625489,"down","NA","NA","NA","NA",-0.66506618,0.223600654,0.401096478,false,-0.961558031,0.034848526,0.168310062,false,"chr_001",22011553,22014927,"+","MS01G20920","--","K09843 (+)-abscisic acid 8'-hydroxylase [EC:1.14.14.137] | (RefSeq) abscisic acid 8'-hydroxylase CYP707A2 (A)","ko00906: Carotenoid biosynthesis; ko01110: Biosynthesis of secondary metabolites","hypothetical protein C1H46_011852 [Malus baccata]","C16B1_PICSI RecName: Full=Cytochrome P450 716B1; EC=1.14.-.-; AltName: Full=Cytochrome P450 CYPA1;","A0A540MUR7_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE02546.1};","Cytochrome P450 CYP4/CYP19/CYP26 subfamilies","GO:0016021,integral component of membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS01G21790",4.3858,2.0706,1.8436,0.7053,0.369,1.2285,0.085,0.4543,1.1422,2.7811,4.4457,5.9904,2.2192,3.3793,1.563,68,32,28,8,5,16,1,5,16,35,59,94,27,41,19,0.84741184,0.060342648,0.103758035,false,0.071662562,0.881946363,0.909568775,false,-1.659708777,0.006350563,0.012671347,"down",-2.023079198,0.005365098,0.010826267,"down",-2.842167615,"1.30179E-05","9.39259E-05","down",-2.071126062,0.003460687,0.018269285,"down","NA","NA","NA","NA",-2.48850429,"2.37925E-06","3.53981E-05","down",-1.707651695,0.003030246,0.030443039,"down","chr_001",23230454,23232408,"-","MS01G21790","--","K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein ATHB-40-like (A)","--","hypothetical protein DVH24_029904 [Malus domestica]","ATB40_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-40; AltName: Full=HD-ZIP protein ATHB-40; AltName: Full=Homeodomain transcription factor ATHB-40;","A0A498I227_MALDO RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};","Transcription factor HEX, contains HOX and HALZ domains","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0043565,sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0045893,positive regulation of DNA-templated transcription; GO:0009733,response to auxin; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00046.32:Homeodomain","HB-other","TF","HB->HB-other"]
["MS01G22720",84.5609,46.287,17.3361,16.4244,26.6575,25.5889,19.7884,58.5833,75.1878,26.7823,27.9927,10.2647,15.1334,17.6791,15.0798,4835,2638,971,687,1332,1229,859,2378,3884,1243,1370,594,679,791,676,-1.009365518,0.177634064,0.258075921,false,-1.351267203,0.031878532,0.053527157,false,-0.906418609,0.055628576,0.087729802,false,0.306658542,0.698683421,0.758911671,false,1.332877198,0.046973297,0.10920071,false,1.678005814,"9.73321E-06",0.000132292,"up",1.216337749,0.004026649,0.125467642,false,0.119286546,0.754756863,0.863592361,false,0.471154357,0.038702533,0.18024358,false,"chr_001",25026323,25029435,"+","MS01G22720","--","K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) uncharacterized protein LOC103413440 isoform X1 (A)","ko04075: Plant hormone signal transduction","probable disease resistance protein At5g66900 [Malus sylvestris]","DRL42_ARATH RecName: Full=Probable disease resistance protein At5g66900;","A0A540MT61_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE01995.1};","--","GO:0005829,cytosol; GO:0012505,endomembrane system; GO:0043531,ADP binding; GO:0005524,ATP binding; GO:0043130,ubiquitin binding; GO:0050832,defense response to fungus; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0005515,protein binding; GO:0032182,ubiquitin-like protein binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF00931.25:NB-ARC domain","--","--","--"]
["MS01G22900",0.1379,0.1661,0,0.7165,2.3361,0.3613,0.4724,1.2047,0.4275,6.7296,0.7735,0.9541,1.6524,1.7628,1.5131,5,6,0,19,74,11,13,31,14,198,24,35,47,50,43,5.017385246,0.000565311,0.001700441,"up",4.300519009,"1.46656E-13","1.28159E-12","up",3.727029149,0.000104217,0.000294238,"up","NA","NA","NA","NA",-1.930563557,0.01845545,0.051106017,false,-1.230044299,0.008593446,0.037875665,"down",-0.670963358,0.376473991,0.794499662,false,-1.261553768,0.155906872,0.314461303,false,-0.537702824,0.389515711,0.672810897,false,"chr_001",25360248,25363198,"-","MS01G22900","--","--","--","patatin-like protein 2 [Malus domestica]","PLP2_ARATH RecName: Full=Patatin-like protein 2; Short=AtPLP2; EC=3.1.1.-; AltName: Full=Patatin-related phospholipase A IIalpha; Short=pPLAIIa; AltName: Full=Phospholipase A IIA; Short=AtPLAIIA;","A0A540MT41_MALBA RecName: Full=Patatin {ECO:0000256|RuleBase:RU361262}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361262};","Ca2+-independent phospholipase A2","GO:0005737,cytoplasm; GO:0016020,membrane; GO:0005777,peroxisome; GO:0047372,acylglycerol lipase activity; GO:0042802,identical protein binding; GO:0016298,lipase activity; GO:0004620,phospholipase activity; GO:0071456,cellular response to hypoxia; GO:0051607,defense response to virus; GO:0016042,lipid catabolic process; GO:0006629,lipid metabolic process; GO:0031408,oxylipin biosynthetic process; GO:0009626,plant-type hypersensitive response; GO:0046686,response to cadmium ion; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0052689,carboxylic ester hydrolase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009615,response to virus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0140546,defense response to symbiont; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0006082,organic acid metabolic process; GO:0009058,biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0031407,oxylipin metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0012501,programmed cell death; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0042579,microbody; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01734.25:Patatin-like phospholipase","--","--","--"]
["MS01G24330",1.2094,0.7367,0.3527,5.6092,13.3451,3.3938,6.7134,10.5866,1.9602,13.0905,8.074,9.3465,5.064,4.6367,11.9,28,17,8,95,270,66,118,174,41,246,160,219,92,84,216,3.919160499,"1.43491E-21","3.92022E-20","up",3.509591387,"7.72302E-13","6.28242E-12","up",3.515490589,"4.58827E-09","2.53602E-08","up",3.361306938,"5.01376E-08","2.24233E-07","up",-0.546661927,0.293943982,0.443146839,false,-0.137819982,0.802814334,0.891468282,false,-0.165216765,0.795488117,0.952039717,false,-0.379783479,0.442150013,0.629120509,false,0.035301074,0.947943407,0.984022922,false,"chr_001",28104435,28106486,"+","MS01G24330","--","K00430 peroxidase [EC:1.11.1.7] | (RefSeq) LOW QUALITY PROTEIN: peroxidase 51-like (A)","ko00940: Phenylpropanoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","LOW QUALITY PROTEIN: peroxidase 51-like [Malus domestica]","PER50_ARATH RecName: Full=Peroxidase 50; Short=Atperox P50; EC=1.11.1.7; AltName: Full=ATP9a; AltName: Full=PRXR2; Flags: Precursor;","A0A5N5GQ73_9ROSA RecName: Full=Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}; EC=1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060};","--","GO:0005737,cytoplasm; GO:0005576,extracellular region; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0004601,peroxidase activity; GO:0042744,hydrogen peroxide catabolic process; GO:0006979,response to oxidative stress; GO:0048511,rhythmic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016209,antioxidant activity; GO:0016491,oxidoreductase activity; GO:0016684,oxidoreductase activity, acting on peroxide as acceptor; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009987,cellular process; GO:0042743,hydrogen peroxide metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0072593,reactive oxygen species metabolic process; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF00141.26:Peroxidase","--","--","--"]
["MS01G24770",1.5311,1.5361,2.0654,0.5232,0.6883,0.2604,0.7923,0.9243,0.4237,1.2126,1.086,0.7564,0.6968,0.6289,0.279,28,28,37,7,11,4,11,12,7,18,17,14,10,9,4,-0.567092684,0.192577574,0.275538735,false,-1.37894213,0.009809203,0.018652831,"down",-1.571984835,0.004978113,0.010156032,"down",-0.987778795,0.054012677,0.085961437,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",28785346,28786280,"-","MS01G24770","--","--","--","uncharacterized protein LOC103425809 [Malus domestica]","--","A0A540NTM8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE14367.1};","--","--","--","--","--","--"]
["MS01G25880",13.6285,14.0953,14.4206,5.0761,7.6224,7.5198,6.5552,7.7652,7.4154,9.0082,6.5746,7.5273,5.7567,4.2563,6.1036,356,367,369,97,174,165,130,144,175,191,147,199,118,87,125,-0.675478867,0.000527988,0.001602072,false,-1.093185958,"2.3116E-08","1.12837E-07","down",-0.840857751,"9.27196E-05",0.000264074,false,-0.673157561,"7.51012E-05",0.000212503,false,0.016382814,0.942472009,0.966144348,false,0.436653539,0.059625025,0.16305992,false,0.166291125,0.503987537,0.856810414,false,-0.148656376,0.57941719,0.743461242,false,0.277972577,0.30849139,0.600372395,false,"chr_001",32135454,32138640,"+","MS01G25880","--","K12590 exosome complex component RRP46 | (RefSeq) exosome complex exonuclease RRP46 homolog (A)","ko03018: RNA degradation","exosome complex exonuclease RRP46 homolog [Malus domestica]","EXOS5_ARATH RecName: Full=Exosome complex exonuclease RRP46 homolog {ECO:0000305}; EC=3.1.13.- {ECO:0000305}; AltName: Full=Exosome component 5 {ECO:0000305}; AltName: Full=Ribosomal RNA-processing protein 46 {ECO:0000305};","A0A5N5GQM1_9ROSA SubName: Full=Exosome complex exonuclease RRP46-like protein {ECO:0000313|EMBL:KAB2617558.1};","Exosomal 3'-5' exoribonuclease complex, subunit Rrp46","GO:0000177,cytoplasmic exosome (RNase complex); GO:0000176,nuclear exosome (RNase complex); GO:0005730,nucleolus; GO:0005840,ribosome; GO:0004536,deoxyribonuclease activity; GO:0003690,double-stranded DNA binding; GO:0004527,exonuclease activity; GO:0042802,identical protein binding; GO:0004540,ribonuclease activity; GO:0003727,single-stranded RNA binding; GO:0071028,nuclear mRNA surveillance; GO:0034427,nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'; GO:0071051,polyadenylation-dependent snoRNA 3'-end processing; GO:0016075,rRNA catabolic process; GO:0006364,rRNA processing; GO:0034475,U4 snRNA 3'-end processing; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004518,nuclease activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0140098,catalytic activity, acting on RNA; GO:0003723,RNA binding; GO:0000956,nuclear-transcribed mRNA catabolic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006401,RNA catabolic process; GO:0006402,mRNA catabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009892,negative regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010605,negative regulation of macromolecule metabolic process; GO:0010629,negative regulation of gene expression; GO:0016070,RNA metabolic process; GO:0016071,mRNA metabolic process; GO:0019222,regulation of metabolic process; GO:0019439,aromatic compound catabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034655,nucleobase-containing compound catabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0044270,cellular nitrogen compound catabolic process; GO:0046483,heterocycle metabolic process; GO:0046700,heterocycle catabolic process; GO:0048519,negative regulation of biological process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071025,RNA surveillance; GO:0071027,nuclear RNA surveillance; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901575,organic substance catabolic process; GO:0000291,nuclear-transcribed mRNA catabolic process, exonucleolytic; GO:0006396,RNA processing; GO:0016074,sno(s)RNA metabolic process; GO:0031123,RNA 3'-end processing; GO:0031126,sno(s)RNA 3'-end processing; GO:0034470,ncRNA processing; GO:0034660,ncRNA metabolic process; GO:0043144,sno(s)RNA processing; GO:0043628,small regulatory ncRNA 3'-end processing; GO:0016072,rRNA metabolic process; GO:0034661,ncRNA catabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0042254,ribosome biogenesis; GO:0044085,cellular component biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0016073,snRNA metabolic process; GO:0016180,snRNA processing; GO:0034472,snRNA 3'-end processing; GO:0000178,exosome (RNase complex); GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0032991,protein-containing complex; GO:0110165,cellular anatomical entity; GO:1902494,catalytic complex; GO:1905354,exoribonuclease complex; GO:0005634,nucleus; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0140513,nuclear protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle","PF01138.24:3' exoribonuclease family, domain 1","--","--","--"]
["MS01G27170",9.9832,10.0713,6.2846,4.0182,4.2205,6.5037,1.4976,2.5781,3.1615,11.2059,8.9095,10.4121,5.2656,8.4344,6.0484,360,362,222,106,133,197,41,66,103,328,275,380,149,238,171,0.399818985,0.106983648,0.168887652,false,-0.130855842,0.624683151,0.6938914,false,-0.635438212,0.02778991,0.047517888,false,-1.590648231,"7.89546E-07","3.0176E-06","down",-1.97264867,"7.8677E-12","1.74602E-10","down",-1.44170685,"5.01616E-06","7.38363E-05","down",-0.952574837,0.004442816,0.132735755,false,-1.016134184,"3.12291E-05",0.000333271,"down",-0.479667828,0.080474473,0.284586814,false,"chr_001",35523600,35526433,"-","MS01G27170","--","K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] | (RefSeq) probable trehalose-phosphate phosphatase J (A)","ko00500: Starch and sucrose metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","hypothetical protein DVH24_039322 [Malus domestica]","TPPJ_ARATH RecName: Full=Probable trehalose-phosphate phosphatase J; Short=AtTPPJ; EC=3.1.3.12; AltName: Full=Trehalose 6-phosphate phosphatase;","A0A498I3H1_MALDO RecName: Full=Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};","Trehalose-6-phosphate synthase component TPS1 and related subunits","GO:0005730,nucleolus; GO:0005634,nucleus; GO:0004805,trehalose-phosphatase activity; GO:0046686,response to cadmium ion; GO:0005992,trehalose biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0019203,carbohydrate phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0008150,biological_process; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0005975,carbohydrate metabolic process; GO:0005984,disaccharide metabolic process; GO:0005991,trehalose metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009311,oligosaccharide metabolic process; GO:0009312,oligosaccharide biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044262,cellular carbohydrate metabolic process; GO:0046351,disaccharide biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity","PF02358.19:Trehalose-phosphatase","--","--","--"]
["MS01G28580",12.0156,13.6797,12.8974,23.7116,20.4895,25.1731,19.473,14.8925,21.6446,15.4561,16.1365,18.1576,15.8377,20.6618,18.5937,408,463,429,589,608,718,502,359,664,426,469,624,422,549,495,0.553664909,0.000108424,0.000385517,false,0.804267912,"2.06568E-07","8.85417E-07",false,1.057358559,"4.03644E-13","3.58894E-12","up",0.81745715,"4.79576E-06","1.63786E-05",false,0.27785284,0.124840745,0.233772701,false,0.028987975,0.879324584,0.935509947,false,-0.241087913,0.183710002,0.642416095,false,0.521244824,0.000343618,0.002576412,false,0.277951211,0.084634062,0.293794399,false,"chr_001",39461728,39463179,"+","MS01G28580","--","--","--","hypothetical protein DVH24_039479 [Malus domestica]","PP187_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36240;","A0A498HY81_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH75780.1};","FOG: PPR repeat","--","PF13041.9:PPR repeat family","--","--","--"]
["MS01G29910",2.9458,4.0041,3.2335,0.0433,0.0725,0.1885,0,0,0.2805,1.1317,0.9251,1.1893,0.1615,0.2834,0.606,93,126,100,1,2,5,0,0,8,29,25,38,4,7,15,-1.45912414,"1.07735E-06","5.54937E-06","down",-2.988494747,"1.13033E-11","8.1016E-11","down",-4.829184987,"1.86301E-15","2.09087E-14","down",-4.895617216,0.000267706,0.00068681,"down",-3.356485884,0.000256617,0.001325118,"down","NA","NA","NA","NA","NA","NA","NA","NA",-3.359237635,"2.34688E-06","3.50083E-05","down","NA","NA","NA","NA","chr_001",43396338,43398072,"-","MS01G29910","--","--","--","hypothetical protein DVH24_042687 [Malus domestica]","--","A0A498HYJ4_MALDO RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};","--","--","--","C2H2","TF","C2H2"]
["MS01G30730",2.1169,1.0426,1.8074,2.5781,2.8188,2.1078,2.4842,2.0602,3.0248,3.5563,4.092,2.8522,2.7958,2.2626,3.0928,55,27,46,49,64,46,49,38,71,75,91,75,57,46,63,1.263807272,0.000218891,0.000726891,"up",1.007530672,0.004071144,0.008455761,"up",0.816676433,0.030104684,0.050942967,false,0.890400225,0.014415261,0.026465936,false,-0.358028596,0.224485419,0.364343093,false,-0.098964949,0.74323196,0.855622682,false,0.073069417,0.818193742,0.955891165,false,-0.43043579,0.162303345,0.323478556,false,-0.16560466,0.593833829,0.817453388,false,"chr_001",45138466,45140945,"-","MS01G30730","--","K17098 annexin D | (RefSeq) LOW QUALITY PROTEIN: annexin D1 (A)","--","hypothetical protein DVH24_016833 [Malus domestica]","ANX1_GOSHI RecName: Full=Annexin Gh1 {ECO:0000303|PubMed:12787021, ECO:0000303|PubMed:16331990, ECO:0000303|PubMed:18441010}; Short=Anx(Gh1) {ECO:0000303|PubMed:12142457, ECO:0000303|PubMed:12787021}; Flags: Fragment;","A0A498HXU8_MALDO RecName: Full=Annexin {ECO:0000256|RuleBase:RU003540};","Annexin","GO:0070382,exocytic vesicle; GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0005509,calcium ion binding; GO:0005544,calcium-dependent phospholipid binding; GO:0001786,phosphatidylserine binding; GO:0017156,calcium-ion regulated exocytosis; GO:0009835,fruit ripening; GO:0070206,protein trimerization; GO:2001006,regulation of cellulose biosynthetic process; GO:0006979,response to oxidative stress; GO:0032940,secretion by cell; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0005543,phospholipid binding; GO:0008289,lipid binding; GO:0072341,modified amino acid binding; GO:0006810,transport; GO:0006887,exocytosis; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016192,vesicle-mediated transport; GO:0045055,regulated exocytosis; GO:0046903,secretion; GO:0051179,localization; GO:0051234,establishment of localization; GO:0140352,export from cell; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0010154,fruit development; GO:0021700,developmental maturation; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0071695,anatomical structure maturation; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0051259,protein complex oligomerization; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0006109,regulation of carbohydrate metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010675,regulation of cellular carbohydrate metabolic process; GO:0010962,regulation of glucan biosynthetic process; GO:0016051,carbohydrate biosynthetic process; GO:0019222,regulation of metabolic process; GO:0030243,cellulose metabolic process; GO:0030244,cellulose biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032881,regulation of polysaccharide metabolic process; GO:0032885,regulation of polysaccharide biosynthetic process; GO:0032950,regulation of beta-glucan metabolic process; GO:0032951,regulation of beta-glucan biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043255,regulation of carbohydrate biosynthetic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:1901576,organic substance biosynthetic process; GO:2000112,regulation of cellular macromolecule biosynthetic process; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0030133,transport vesicle; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0099503,secretory vesicle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF00191.23:Annexin","--","--","--"]
["MS01G31690",4.2291,4.1643,4.757,1.2847,1.2099,2.2377,1.8053,1.7099,1.4303,2.2674,2.2417,2.2441,1.7965,1.8516,1.3486,108,106,119,24,27,48,35,31,33,47,49,58,36,37,27,-0.774236884,0.001218909,0.003380634,false,-1.101616612,"6.57968E-05",0.00019261,"down",-1.265035224,"5.65668E-05",0.000167153,"down",-1.131052418,"5.69285E-05",0.000164413,"down",-0.343507478,0.283816181,0.432306421,false,-0.01239379,0.97254046,0.986370246,false,0.138181054,0.724926218,0.930312984,false,-0.476379435,0.186769538,0.355294368,false,-0.140694473,0.720448708,0.885688062,false,"chr_001",47040839,47042839,"-","MS01G31690","--","--","--","zinc-finger homeodomain protein 2-like isoform X1 [Malus domestica]","ZHD1_ORYSI RecName: Full=Zinc-finger homeodomain protein 1;","A0A540M3Q9_MALBA RecName: Full=ZF-HD dimerization-type domain-containing protein {ECO:0000259|PROSITE:PS51523};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0046872,metal ion binding; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF04770.15:ZF-HD protein dimerisation region","zf-HD","TF","zf-HD"]
["MS01G32270",0.4258,0.6745,0.9151,0.4595,0.1026,0.3735,0.3838,0.221,0.1985,0.3589,0.3142,0.4872,0.1714,0.1718,0.2859,19,30,40,15,4,14,13,7,8,13,12,22,6,6,10,-0.596353729,0.219546468,0.306756652,false,-1.382652619,0.014250521,0.026130969,"down",-0.911323135,0.140735007,0.197443969,false,-1.040087425,0.062770343,0.098119888,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",47976433,47980642,"+","MS01G32270","--","--","--","hypothetical protein DVH24_016685 [Malus domestica]","VIL2_ARATH RecName: Full=VIN3-like protein 2; AltName: Full=Vernalization5/VIN3-like protein 1;","A0A498HY71_MALDO RecName: Full=PHD_Oberon domain-containing protein {ECO:0000259|Pfam:PF07227};","--","GO:0005677,chromatin silencing complex; GO:0031519,PcG protein complex; GO:0009506,plasmodesma; GO:0003677,DNA binding; GO:0042802,identical protein binding; GO:0046872,metal ion binding; GO:0035064,methylated histone binding; GO:0032922,circadian regulation of gene expression; GO:0009908,flower development; GO:1900111,positive regulation of histone H3-K9 dimethylation; GO:0040029,epigenetic regulation of gene expression; GO:0048587,regulation of short-day photoperiodism, flowering; GO:0009409,response to cold; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0010048,vernalization response; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0042393,histone binding; GO:0140030,modification-dependent protein binding; GO:0140034,methylation-dependent protein binding; GO:0007623,circadian rhythm; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0019222,regulation of metabolic process; GO:0032501,multicellular organismal process; GO:0043170,macromolecule metabolic process; GO:0048511,rhythmic process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022414,reproductive process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0006479,protein methylation; GO:0006807,nitrogen compound metabolic process; GO:0008213,protein alkylation; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016570,histone modification; GO:0016571,histone methylation; GO:0018022,peptidyl-lysine methylation; GO:0018027,peptidyl-lysine dimethylation; GO:0018193,peptidyl-amino acid modification; GO:0018205,peptidyl-lysine modification; GO:0019538,protein metabolic process; GO:0031056,regulation of histone modification; GO:0031058,positive regulation of histone modification; GO:0031060,regulation of histone methylation; GO:0031062,positive regulation of histone methylation; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031399,regulation of protein modification process; GO:0031401,positive regulation of protein modification process; GO:0032259,methylation; GO:0034968,histone lysine methylation; GO:0036123,histone H3-K9 dimethylation; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:0043414,macromolecule methylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051247,positive regulation of protein metabolic process; GO:0051567,histone H3-K9 methylation; GO:0051570,regulation of histone H3-K9 methylation; GO:0051574,positive regulation of histone H3-K9 methylation; GO:0061647,histone H3-K9 modification; GO:0080090,regulation of primary metabolic process; GO:1900109,regulation of histone H3-K9 dimethylation; GO:1901564,organonitrogen compound metabolic process; GO:0006325,chromatin organization; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009648,photoperiodism; GO:0048572,short-day photoperiodism; GO:0048573,photoperiodism, flowering; GO:0048575,short-day photoperiodism, flowering; GO:0048583,regulation of response to stimulus; GO:0050896,response to stimulus; GO:2000028,regulation of photoperiodism, flowering; GO:2000241,regulation of reproductive process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF07227.14:PHD - plant homeodomain finger protein","--","--","--"]
["MS01G33940",5.5492,5.1306,5.5538,9.6679,5.8519,7.7721,11.1789,4.7513,7.7079,4.2896,3.178,4.0854,3.1892,5.9791,6.1064,51,47,50,65,47,60,78,31,64,32,25,38,23,43,44,-0.300336038,0.360021659,0.459429116,false,0.200255444,0.564495453,0.639787506,false,0.727674769,0.019641073,0.034862582,false,0.827386489,0.025138373,0.043660843,false,1.139338887,0.005527833,0.018760152,"up",0.641052765,0.126830478,0.278956084,false,0.095245621,0.806585915,0.953693899,false,1.046022072,0.003259556,0.016347086,"up",0.552132532,0.137638464,0.389252417,false,"chr_001",51149961,51151809,"-","MS01G33940","--","K23341 erlin | (RefSeq) erlin-1 (A)","--","hypothetical protein DVH24_016513 [Malus domestica]","CHR4_ARATH RecName: Full=Protein CHROMATIN REMODELING 4 {ECO:0000303|PubMed:16547115}; Short=AtCHR4; EC=3.6.4.-; AltName: Full=Protein PICKLE RELATED 1 {ECO:0000303|PubMed:10570159};","A0A498HWY8_MALDO RecName: Full=PHB domain-containing protein {ECO:0000259|Pfam:PF01145};","Prohibitin-related membrane protease subunits","GO:0000785,chromatin; GO:0005634,nucleus; GO:0009506,plasmodesma; GO:0042735,protein body; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0140658,ATP-dependent chromatin remodeler activity; GO:0003682,chromatin binding; GO:0003677,DNA binding; GO:0004386,helicase activity; GO:0042393,histone binding; GO:0046872,metal ion binding; GO:0006338,chromatin remodeling; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0008094,ATP-dependent activity, acting on DNA; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0003676,nucleic acid binding; GO:0005515,protein binding; GO:0043169,cation binding; GO:0006325,chromatin organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005694,chromosome; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction; GO:0005737,cytoplasm","PF01145.28:SPFH domain / Band 7 family","--","--","--"]
["MS01G35080",16.0257,16.3916,16.28,1.2823,1.5207,2.6989,1.5445,2.6428,0.9518,6.7417,7.9458,7.8787,3.7857,4.5955,3.9884,205,209,204,12,17,29,15,24,11,70,87,102,38,46,40,-0.922984072,"1.19545E-06","6.11471E-06",false,-1.685362951,"1.03296E-13","9.15956E-13","down",-2.928809698,"2.59234E-21","4.90257E-20","down",-2.98281463,"2.29533E-17","2.5817E-16","down",-2.038439295,"6.98594E-07","6.68607E-06","down",-1.2720279,0.005223057,0.025344627,"down",-0.025527845,0.964811369,0.990311029,false,-1.990688583,"4.01568E-08","9.35905E-07","down",-1.223066221,0.002656506,0.027749392,"down","chr_001",52874666,52875212,"+","MS01G35080","--","--","--","uncharacterized protein LOC103431782 [Malus domestica]","--","A0A540LNB4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD87977.1};","--","--","--","--","--","--"]
["MS01G35110",16.7026,19.121,20.7014,9.5686,8.1368,9.0428,7.2117,7.3608,8.6224,7.7869,9.1819,7.0259,6.6063,6.7135,6.5414,1205,1375,1463,505,513,548,395,377,562,456,567,513,374,379,370,-1.050433411,"1.45766E-11","1.49984E-10","down",-1.214557291,"3.06677E-19","4.37178E-18","down",-0.864705209,"5.82674E-09","3.17169E-08",false,-1.001740382,"4.89857E-12","3.4781E-11","down",0.060731025,0.717529023,0.81722078,false,0.228904763,0.119470858,0.267785665,false,-0.138156312,0.367102038,0.789463067,false,0.201700428,0.238640924,0.419568224,false,0.375081622,0.009431499,0.069214266,false,"chr_001",52885506,52899927,"-","MS01G35110","--","K00889 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68] | (RefSeq) phosphatidylinositol 4-phosphate 5-kinase 7 (A)","ko00562: Inositol phosphate metabolism; ko01100: Metabolic pathways; ko04070: Phosphatidylinositol signaling system; ko04144: Endocytosis","phosphatidylinositol 4-phosphate 5-kinase 7 [Malus domestica]","PI5K8_ARATH RecName: Full=Phosphatidylinositol 4-phosphate 5-kinase 8; Short=AtPIP5K8; EC=2.7.1.68; AltName: Full=1-phosphatidylinositol 4-phosphate kinase 8; AltName: Full=Diphosphoinositide kinase 8; AltName: Full=PtdIns(4)P-5-kinase 8;","A0A498HS39_MALDO RecName: Full=1-phosphatidylinositol-4-phosphate 5-kinase {ECO:0000256|ARBA:ARBA00012172}; EC=2.7.1.68 {ECO:0000256|ARBA:ARBA00012172}; Flags: Fragment;","Phosphatidylinositol-4-phosphate 5-kinase","GO:0005886,plasma membrane; GO:0016308,1-phosphatidylinositol-4-phosphate 5-kinase activity; GO:0005524,ATP binding; GO:0046854,phosphatidylinositol phosphate biosynthetic process; GO:0016310,phosphorylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016307,phosphatidylinositol phosphate kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006629,lipid metabolic process; GO:0006644,phospholipid metabolic process; GO:0006650,glycerophospholipid metabolic process; GO:0006661,phosphatidylinositol biosynthetic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0008654,phospholipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0019637,organophosphate metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0045017,glycerolipid biosynthetic process; GO:0046474,glycerophospholipid biosynthetic process; GO:0046486,glycerolipid metabolic process; GO:0046488,phosphatidylinositol metabolic process; GO:0071704,organic substance metabolic process; GO:0090407,organophosphate biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF01504.21:Phosphatidylinositol-4-phosphate 5-Kinase","--","--","--"]
["MS01G36440",11.0312,10.0723,9.4897,19.9928,18.58,27.4456,20.0809,10.8246,15.7771,10.5363,13.4669,11.267,11.5305,13.7804,15.651,89,81,75,118,131,186,123,62,115,69,93,92,73,87,99,0.387258274,0.10263982,0.163143651,false,0.710212174,0.0033252,0.007045656,false,1.316641781,"5.11066E-08","2.41975E-07","up",0.892250467,0.002383948,0.005163254,false,0.516908172,0.080659088,0.167241026,false,0.197058978,0.501868266,0.684334391,false,-0.426305798,0.143813085,0.598609758,false,0.945461068,0.000109608,0.000988387,false,0.630954941,0.010130725,0.072935954,false,"chr_001",54746362,54747272,"+","MS01G36440","--","K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] | (RefSeq) DExH-box ATP-dependent RNA helicase DExH9 (A)","ko03018: RNA degradation","zinc finger CCCH domain-containing protein 5-like [Pyrus ussuriensis x Pyrus communis]","MTR4_ARATH RecName: Full=DExH-box ATP-dependent RNA helicase DExH9 {ECO:0000305}; EC=3.6.4.13 {ECO:0000305}; AltName: Full=Protein MTR4 homolog {ECO:0000305}; Short=AtMTR4 {ECO:0000303|PubMed:21682783};","A0A5N5FBR2_9ROSA SubName: Full=Zinc finger CCCH domain-containing protein 5-like {ECO:0000313|EMBL:KAB2600529.1};","Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily","GO:0005730,nucleolus; GO:0005654,nucleoplasm; GO:0005634,nucleus; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0003724,RNA helicase activity; GO:0019843,rRNA binding; GO:0000460,maturation of 5.8S rRNA; GO:0006401,RNA catabolic process; GO:0031125,rRNA 3'-end processing; GO:0006364,rRNA processing; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0004386,helicase activity; GO:0008186,ATP-dependent activity, acting on RNA; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016072,rRNA metabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0034470,ncRNA processing; GO:0034641,cellular nitrogen compound metabolic process; GO:0034660,ncRNA metabolic process; GO:0042254,ribosome biogenesis; GO:0043170,macromolecule metabolic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0019439,aromatic compound catabolic process; GO:0034655,nucleobase-containing compound catabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0044270,cellular nitrogen compound catabolic process; GO:0046700,heterocycle catabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901575,organic substance catabolic process; GO:0031123,RNA 3'-end processing; GO:0043628,small regulatory ncRNA 3'-end processing; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity","PF08148.15:DSHCT (NUC185) domain","--","--","--"]
["MS02G01580",14.3657,16.9955,18.0934,3.4174,3.8428,5.0641,3.7353,3.6266,4.4605,4.8728,6.1466,6.7101,4.5649,5.293,5.378,385,454,475,67,90,114,76,69,108,106,141,182,96,111,113,-1.291435269,"3.25883E-12","3.60951E-11","down",-1.40545967,"5.83636E-15","5.80764E-14","down",-1.789874287,"3.29107E-17","4.32412E-16","down",-1.778849061,"6.20709E-20","8.39368E-19","down",-0.473989911,0.03907562,0.094442445,false,-0.357800201,0.115005799,0.261100621,false,0.009190811,0.97138301,0.992011845,false,-0.480459738,0.053361231,0.145370946,false,-0.359347077,0.138046612,0.389651323,false,"chr_002",3482621,3483766,"-","MS02G01580","--","K15111 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26 | (RefSeq) protein MITOFERRINLIKE 1, chloroplastic-like (A)","--","protein MITOFERRINLIKE 1, chloroplastic-like [Malus domestica]","MFL1_ARATH RecName: Full=Protein MITOFERRINLIKE 1, chloroplastic; Short=AtMFL1; Flags: Precursor;","A0A5N5IJ19_9ROSA SubName: Full=Protein MITOFERRINLIKE 1 {ECO:0000313|EMBL:KAB2635224.1};","Mitochondrial carrier protein PET8","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009706,chloroplast inner membrane; GO:0016021,integral component of membrane; GO:0005743,mitochondrial inner membrane; GO:0009536,plastid; GO:0000095,S-adenosyl-L-methionine transmembrane transporter activity; GO:0006826,iron ion transport; GO:0010039,response to iron ion; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015101,organic cation transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:1901682,sulfur compound transmembrane transporter activity; GO:0000041,transition metal ion transport; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0008150,biological_process; GO:0030001,metal ion transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009528,plastid inner membrane; GO:0016020,membrane; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031969,chloroplast membrane; GO:0042170,plastid membrane; GO:0031224,intrinsic component of membrane; GO:0005739,mitochondrion; GO:0005740,mitochondrial envelope; GO:0031966,mitochondrial membrane","PF00153.30:Mitochondrial carrier protein","--","--","--"]
["MS02G02070",3.8569,3.6171,4.9644,5.0431,5.277,5.1905,4.3072,4.2518,4.9187,7.8505,4.408,9.9415,7.2658,8.3577,6.7375,46,43,58,44,55,52,39,36,53,76,45,120,68,78,63,1.034955968,0.005396847,0.012733111,"up",1.14120888,"3.76087E-05",0.000114662,"up",0.537199515,0.073626104,0.112112219,false,0.401916281,0.19430566,0.261317075,false,-0.618286969,0.100201462,0.197867412,false,-0.723393174,0.010197567,0.043103295,false,-0.137272975,0.644440678,0.906547216,false,-0.476652861,0.201119843,0.373895366,false,-0.578123976,0.033911071,0.165484516,false,"chr_002",4528934,4529443,"+","MS02G02070","--","--","--","hypothetical protein DVH24_030648 [Malus domestica]","--","A0A498JYV1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI00158.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF12555.11:Thiamine pyrophosphokinase C terminal","--","--","--"]
["MS02G03720",52.1572,56.2651,62.9212,15.9834,14.7179,21.7747,15.7862,16.0584,16.4088,29.1702,31.8579,33.6277,19.9561,29.0309,22.6901,1249,1343,1476,280,308,438,287,273,355,567,653,815,375,544,426,-0.6682853,"1.53392E-07","9.08032E-07",false,-0.965312402,"1.58183E-08","7.88963E-08",false,-1.497850303,"5.36469E-17","6.91144E-16","down",-1.543637479,"2.11324E-28","4.82494E-27","down",-0.862588332,"3.33275E-10","5.84023E-09",false,-0.563254443,0.002839885,0.015605272,false,-0.046685224,0.804740736,0.953441977,false,-0.812355174,"5.78319E-06","7.70016E-05",false,-0.508088402,0.018809005,0.111613789,false,"chr_002",8092458,8093877,"+","MS02G03720","--","K02952 small subunit ribosomal protein S13 | (RefSeq) 30S ribosomal protein S13, chloroplastic (A)","ko03010: Ribosome","30S ribosomal protein S13, chloroplastic [Malus domestica]","RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor;","A0A498K4U2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI00332.1};","Ribosomal protein S18","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0005739,mitochondrion; GO:0015935,small ribosomal subunit; GO:0003729,mRNA binding; GO:0019843,rRNA binding; GO:0003735,structural constituent of ribosome; GO:0006412,translation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0005840,ribosome; GO:0032991,protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0044391,ribosomal subunit; GO:1990904,ribonucleoprotein complex","PF00416.25:Ribosomal protein S13/S18","--","--","--"]
["MS02G04790",0.6084,0.6685,0.8281,1.7029,1.4255,1.3106,1.7172,2.3261,3.1105,0.464,0.7785,1.0591,1.0707,0.6664,1.2564,21,23,28,43,43,38,45,57,97,13,23,37,29,18,34,0.321926407,0.477030755,0.575564913,false,0.803954858,0.055830221,0.08787005,false,1.293028574,0.000413549,0.001045047,"up",2.047342423,"1.0235E-08","5.03043E-08","up",1.736925525,"1.93934E-05",0.000134626,"up",1.260767292,0.000930159,0.00622799,"up",0.754642487,0.026254291,0.31125896,false,0.988956447,0.018472766,0.064947538,false,0.515254703,0.183725607,0.456399569,false,"chr_002",10054089,10076009,"+","MS02G04790","--","K00085 aldose-6-phosphate reductase (NADPH2) [EC:1.1.1.200] | (RefSeq) S6PDH; NADP-dependent D-sorbitol-6-phosphate dehydrogenase (A)","--","hypothetical protein C1H46_007998 [Malus baccata]","S6PD_MALDO RecName: Full=NADP-dependent D-sorbitol-6-phosphate dehydrogenase; EC=1.1.1.200; AltName: Full=Aldose-6-phosphate reductase [NADPH]; AltName: Full=NADP-S6PDH;","A0A540N5Q0_MALBA RecName: Full=Polyprenol reductase {ECO:0000256|RuleBase:RU367081}; EC=1.3.1.94 {ECO:0000256|RuleBase:RU367081};","Aldo/keto reductase family proteins","GO:0047641,aldose-6-phosphate reductase (NADPH) activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","PF02544.19:3-oxo-5-alpha-steroid 4-dehydrogenase","--","--","--"]
["MS02G05730",0.467,0.2343,0.2384,15.3216,22.2449,11.3976,16.8781,27.5883,22.5186,14.312,8.1842,10.0076,18.0405,10.0341,17.5352,16,8,8,384,666,328,439,671,697,398,240,347,485,269,471,5.307072692,"1.36645E-40","1.22735E-38","up",5.892355973,"7.57981E-54","6.50828E-52","up",5.92933497,"3.95312E-45","2.94819E-43","up",6.435953868,"1.69681E-71","2.41531E-69","up",1.144054685,"8.79628E-05",0.000513845,"up",0.559758559,0.047449184,0.138100681,false,0.502470837,0.119867156,0.562315368,false,0.643572451,0.061452157,0.160939463,false,0.065255905,0.846546519,0.942920491,false,"chr_002",12438879,12440950,"-","MS02G05730","--","--","--","uncharacterized protein LOC103445011 [Malus domestica]","--","A0A498JX21_MALDO RecName: Full=AB hydrolase-1 domain-containing protein {ECO:0000259|Pfam:PF00561};","Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)","--","PF00561.23:alpha/beta hydrolase fold","--","--","--"]
["MS02G07330",1.2685,1.3061,0.6815,0.2738,0.4584,0.5564,0.2198,0.3291,0.2217,0.4935,0.585,0.4618,0.2552,0.3413,0.6387,38,39,20,6,12,14,5,7,6,12,15,14,6,8,15,-0.903715907,0.059928663,0.103166254,false,-1.116366406,0.043114169,0.069813234,false,-1.122440428,0.037021422,0.061333783,false,-1.81304404,0.002154398,0.004715173,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_002",17332977,17337073,"+","MS02G07330","--","K06972 presequence protease [EC:3.4.24.-] | (RefSeq) presequence protease 1, chloroplastic/mitochondrial-like (A)","--","hypothetical protein DVH24_021614 [Malus domestica]","PREP1_ARATH RecName: Full=Presequence protease 1, chloroplastic/mitochondrial; Short=AtPreP1; Short=PreP 1; EC=3.4.24.-; AltName: Full=Zinc metalloprotease 1; Short=AtZnMP1; Flags: Precursor;","A0A498K250_MALDO RecName: Full=M16C_associated domain-containing protein {ECO:0000259|SMART:SM01264};","Metalloendoprotease HMP1 (insulinase superfamily)","GO:0048046,apoplast; GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0005829,cytosol; GO:0005759,mitochondrial matrix; GO:0005739,mitochondrion; GO:0046872,metal ion binding; GO:0004222,metalloendopeptidase activity; GO:0016485,protein processing; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008237,metallopeptidase activity; GO:0016787,hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0051604,protein maturation; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0031974,membrane-enclosed lumen; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen","PF05193.24:Peptidase M16 inactive domain","--","--","--"]
["MS02G08020",7.2802,5.6124,6.0238,3.3522,2.7184,4.4703,3.0787,1.7271,2.4599,2.6907,4.4317,2.6123,4.004,4.4559,3.6165,190,146,154,64,62,98,61,32,58,57,99,69,82,91,74,-0.782330099,0.004337211,0.010503067,false,-0.356325837,0.11723139,0.168587107,false,-0.638339567,0.014911971,0.027254584,false,-1.097004161,0.000133645,0.000361825,"down",-0.305026699,0.391040344,0.543985169,false,-0.725926253,0.015926383,0.060740188,false,-0.460154848,0.164438654,0.618915203,false,0.156981768,0.632961476,0.78100832,false,-0.25752851,0.342590421,0.631545709,false,"chr_002",19099298,19100413,"+","MS02G08020","--","K18801 glucuronoxylan 4-O-methyltransferase [EC:2.1.1.112] | (RefSeq) glucuronoxylan 4-O-methyltransferase 3-like (A)","--","protein IRX15-LIKE-like [Malus sylvestris]","IX15L_ARATH RecName: Full=Protein IRX15-LIKE;","A0A540LXS6_MALBA RecName: Full=Polysacc_synt_4 domain-containing protein {ECO:0000259|Pfam:PF04669};","--","GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0009834,plant-type secondary cell wall biogenesis; GO:0045492,xylan biosynthetic process; GO:0008150,biological_process; GO:0009832,plant-type cell wall biogenesis; GO:0009987,cellular process; GO:0042546,cell wall biogenesis; GO:0044085,cellular component biogenesis; GO:0071554,cell wall organization or biogenesis; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010410,hemicellulose metabolic process; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044038,cell wall macromolecule biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0045491,xylan metabolic process; GO:0070589,cellular component macromolecule biosynthetic process; GO:0070592,cell wall polysaccharide biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane","PF04669.16:Polysaccharide biosynthesis","--","--","--"]
["MS02G09530",2.9722,2.1162,3.0342,3.5387,4.8274,1.9404,3.5361,5.4021,4.3511,2.1262,1.2321,0.8526,5.0095,1.4703,2.0789,31,22,31,27,44,17,28,40,41,18,11,9,41,12,17,-0.766433109,0.139875743,0.211538797,false,0.379443774,0.47513206,0.555760369,false,0.576358678,0.229518904,0.30075448,false,0.992667796,0.008973494,0.017275703,false,1.77567125,0.000327179,0.001640281,"up",0.631943867,0.221099659,0.407283598,false,0.413649544,0.372488625,0.792502458,false,1.357767558,0.023270507,0.077342217,false,0.22697516,0.70476471,0.877417726,false,"chr_002",22669954,22670498,"-","MS02G09530","--","--","--","phytosulfokines-like [Malus domestica]","PSK_ASPOF RecName: Full=Phytosulfokines; Contains: RecName: Full=Phytosulfokine-alpha; Short=PSK-alpha; Short=Phytosulfokine-a; Contains: RecName: Full=Phytosulfokine-beta; Short=PSK-beta; Short=Phytosulfokine-b; Flags: Precursor;","A0A498JN88_MALDO RecName: Full=Phytosulfokine {ECO:0000256|RuleBase:RU368031}; Contains: RecName: Full=Phytosulfokine-alpha {ECO:0000256|RuleBase:RU368031}; Short=PSK-alpha {ECO:0000256|RuleBase:RU368031}; Short=Phytosulfokine-a {ECO:0000256|RuleBase:RU368031}; Contains: RecName: Full=Phytosulfokine-beta {ECO:0000256|RuleBase:RU368031}; Short=PSK-beta {ECO:0000256|RuleBase:RU368031}; Short=Phytosulfokine-b {ECO:0000256|RuleBase:RU368031};","--","GO:0005576,extracellular region; GO:0008083,growth factor activity; GO:0030154,cell differentiation; GO:0008283,cell population proliferation; GO:0003674,molecular_function; GO:0005102,signaling receptor binding; GO:0005488,binding; GO:0005515,protein binding; GO:0030545,signaling receptor regulator activity; GO:0030546,signaling receptor activator activity; GO:0048018,receptor ligand activity; GO:0098772,molecular function regulator activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF06404.15:Phytosulfokine precursor protein (PSK)","--","--","--"]
["MS02G10180",52.4037,56.6399,69.3307,1.7192,9.4346,11.9781,5.1539,4.5274,3.4029,15.8388,29.5502,30.791,6.5891,16.7868,17.111,375,404,486,9,59,72,28,23,22,92,181,223,37,94,96,-1.045024886,"4.48199E-05",0.000171187,"down",-1.851210814,"3.18963E-09","1.73777E-08","down",-2.731531174,"3.75014E-08","1.81304E-07","down",-3.493334629,"1.28406E-38","5.05302E-37","down",-2.428870908,"1.90569E-11","3.998E-10","down",-1.618578541,0.000209924,0.001809729,"down",-0.752046417,0.232311985,0.689006606,false,-1.666638012,0.002950223,0.015081978,"down",-0.854776206,0.16067282,0.42410525,false,"chr_002",23827979,23828500,"-","MS02G10180","--","K14488 SAUR family protein | (RefSeq) auxin-induced protein 15A-like (A)","ko04075: Plant hormone signal transduction","auxin-induced protein 15A-like [Malus domestica]","AX6B_SOYBN RecName: Full=Auxin-induced protein 6B;","A0A540MUF8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE02418.1};","--","GO:0009734,auxin-activated signaling pathway; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009733,response to auxin; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus","PF02519.17:Auxin responsive protein","--","--","--"]
["MS02G11260",1.5156,2.2889,1.6137,1.448,1.4359,1.5132,1.4382,1.6528,1.8218,0.7228,0.971,0.9983,0.6438,0.6248,0.7067,93,140,97,65,77,78,67,72,101,36,51,62,31,30,34,-0.823721561,0.004872342,0.011640599,false,-1.164575502,0.000141345,0.00038996,"down",-0.088080133,0.746785771,0.79721197,false,0.138984273,0.60813775,0.68023078,false,0.975785491,0.000372352,0.001837246,false,1.320517788,"5.37398E-06","7.82706E-05","up",0.226563476,0.359272157,0.784359319,false,0.75243249,0.00674551,0.029368834,false,1.102354857,0.000140717,0.002887049,"up","chr_002",25614498,25617121,"-","MS02G11260","--","no KO assigned | (RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g50270-like (A)","--","hypothetical protein DVH24_010030 [Malus domestica]","PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g35130, chloroplastic; Flags: Precursor;","A0A498JRA5_MALDO RecName: Full=DYW_deaminase domain-containing protein {ECO:0000259|Pfam:PF14432};","FOG: PPR repeat","GO:0009507,chloroplast; GO:0008270,zinc ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF01535.23:PPR repeat","--","--","--"]
["MS02G11530",12.5962,17.2745,9.0347,2.0064,1.8049,1.1736,2.7989,3.7955,3.9039,6.2073,3.4551,4.2424,1.3958,4.3392,2.0956,575,786,404,67,72,45,97,123,161,230,135,196,50,155,75,-1.290699184,"5.80945E-05",0.000217365,"down",-2.031629795,"1.20217E-07","5.33056E-07","down",-2.748481845,"1.48347E-16","1.83728E-15","down",-1.614501272,"1.37253E-08","6.62222E-08","down",-0.306751181,0.310245221,0.460814286,false,0.43246539,0.273200381,0.466423181,false,1.134270072,0.000270971,0.027675211,"up",-1.437366113,"5.32424E-05",0.00053218,"down",-0.689989606,0.124157248,0.366651459,false,"chr_002",26001378,26005738,"-","MS02G11530","--","K00423 L-ascorbate oxidase [EC:1.10.3.3] | (RefSeq) L-ascorbate oxidase homolog (A)","ko00053: Ascorbate and aldarate metabolism; ko01100: Metabolic pathways","L-ascorbate oxidase homolog [Pyrus x bretschneideri]","ASOL_TOBAC RecName: Full=L-ascorbate oxidase homolog; EC=1.10.3.-; AltName: Full=Pollen-specific protein NTP303; Flags: Precursor;","A0A5N5HB68_9ROSA SubName: Full=L-ascorbate oxidase-like protein {ECO:0000313|EMBL:KAB2623372.1};","Multicopper oxidases","GO:0005615,extracellular space; GO:0005507,copper ion binding; GO:0016491,oxidoreductase activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF00394.25:Multicopper oxidase","--","--","--"]
["MS02G12550",12.9203,13.3311,15.4263,23.8839,21.061,24.7215,24.8945,20.151,24.3775,15.1339,13.79,15.3082,15.7806,16.7462,16.3174,914,940,1069,1236,1302,1469,1337,1012,1558,869,835,1096,876,927,905,0.27657791,0.046365975,0.082774175,false,0.522834371,"1.89185E-05","6.06331E-05",false,0.955164632,"5.12306E-13","4.50799E-12",false,1.02045637,"3.44642E-12","2.48681E-11","up",0.756803105,"4.8331E-07","4.80872E-06",false,0.51268764,0.000239159,0.00201653,false,0.063086973,0.659629453,0.91155747,false,0.696284066,"3.0139E-07","5.7343E-06",false,0.457459181,0.000140317,0.00288097,false,"chr_002",28114449,28120114,"-","MS02G12550","--","--","--","AT-rich interactive domain-containing protein 3-like isoform X1 [Malus sylvestris]","ARID3_ARATH RecName: Full=AT-rich interactive domain-containing protein 3; Short=ARID domain-containing protein 3;","A0A540NS75_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE13839.1};","DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain","GO:0005634,nucleus; GO:0032991,protein-containing complex; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0006357,regulation of transcription by RNA polymerase II; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF01388.24:ARID/BRIGHT DNA binding domain","ARID","TR","ARID"]
["MS02G13570",1.7434,1.8341,2.0516,1.9694,2.0088,2.2196,1.515,1.3472,2.3183,1.0441,1.6266,1.5671,0.7097,1.1759,0.8648,144,151,166,119,145,154,95,79,173,70,115,131,46,76,56,-0.224285015,0.323144234,0.421304929,false,-0.741824202,0.003270738,0.006940712,false,0.354367983,0.064347857,0.09976565,false,0.161782698,0.517561451,0.596407528,false,0.399779813,0.171675793,0.298410389,false,0.918610902,0.003252835,0.01737084,false,-0.193197204,0.457349988,0.833881776,false,0.595638376,0.012810034,0.048790883,false,1.121305982,"1.71285E-05",0.000523447,"up","chr_002",29748139,29751670,"-","MS02G13570","--","K14303 nuclear pore complex protein Nup160 | (RefSeq) nuclear pore complex protein NUP160 isoform X3 (A)","ko03013: Nucleocytoplasmic transport","hypothetical protein DVH24_010306 [Malus domestica]","--","A0A498JXR8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH97981.1};","--","--","--","--","--","--"]
["MS02G14260",29.5638,42.5065,30.0997,14.1033,18.5481,14.9947,16.3834,20.2501,16.434,18.3884,13.7361,15.6793,13.882,13.1848,14.0612,1129,1618,1126,394,619,481,475,549,567,570,449,606,416,394,421,-0.904175171,"4.18008E-05",0.00016061,false,-1.021412916,"5.90736E-08","2.74004E-07","down",-0.881886838,0.000121157,0.000338185,false,-0.661249565,0.002075275,0.004558435,false,0.257065979,0.21435168,0.351694709,false,0.374940816,0.027260039,0.091921289,false,0.217067713,0.317968695,0.756919819,false,0.042155513,0.851156495,0.920694259,false,0.166889862,0.385977941,0.669869854,false,"chr_002",30804609,30808189,"-","MS02G14260","--","K22651 E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1 (A)","--","E3 ubiquitin-protein ligase RNF4-like isoform X2 [Malus domestica]","YCF3_ATRBE RecName: Full=Photosystem I assembly protein Ycf3 {ECO:0000255|HAMAP-Rule:MF_00439};","A0A5N5IBV9_9ROSA SubName: Full=E3 ubiquitin-protein ligase RNF4 {ECO:0000313|EMBL:KAB2636583.1};","Predicted E3 ubiquitin ligase","GO:0009535,chloroplast thylakoid membrane; GO:0015979,photosynthesis; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0044237,cellular metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity","PF13923.9:Zinc finger, C3HC4 type (RING finger)","--","--","--"]
["MS02G15240",6.17,3.0091,2.8868,13.237,30.7419,10.0488,24.4938,44.6624,28.5979,17.7364,5.0559,7.8745,12.9408,7.6658,16.122,144,70,66,226,627,197,434,740,603,336,101,186,237,140,295,1.552728287,0.00171198,0.004572965,"up",1.892374024,"3.27606E-07","1.36461E-06","up",2.39641243,"6.67241E-07","2.69447E-06","up",3.300529136,"1.60676E-20","2.26868E-19","up",1.764974138,"9.11755E-05",0.000530506,"up",1.422989683,"1.08059E-05",0.00014488,"up",0.896945834,0.043891903,0.382179701,false,0.86851089,0.110858082,0.247516783,false,0.533673541,0.236195969,0.523164445,false,"chr_002",32093430,32094603,"-","MS02G15240","--","K00799 glutathione S-transferase [EC:2.5.1.18] | (RefSeq) probable glutathione S-transferase isoform X2 (A)","ko00480: Glutathione metabolism; ko01100: Metabolic pathways","probable glutathione S-transferase [Malus sylvestris]","GSTX1_TOBAC RecName: Full=Probable glutathione S-transferase; EC=2.5.1.18; AltName: Full=Auxin-induced protein PGNT1/PCNT110;","A0A540MB54_MALBA RecName: Full=Glutathione transferase {ECO:0000256|ARBA:ARBA00012452}; EC=2.5.1.18 {ECO:0000256|ARBA:ARBA00012452};","Glutathione S-transferase","GO:0005737,cytoplasm; GO:0004364,glutathione transferase activity; GO:0009734,auxin-activated signaling pathway; GO:0006749,glutathione metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016765,transferase activity, transferring alkyl or aryl (other than methyl) groups; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009733,response to auxin; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0006518,peptide metabolic process; GO:0006575,cellular modified amino acid metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043603,cellular amide metabolic process; GO:0044237,cellular metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF02798.23:Glutathione S-transferase, N-terminal domain","--","--","--"]
["MS02G16280",0.6246,0.9311,0.2551,0.8783,0.7556,0.9986,1.2929,0.6033,1.8767,1.3632,2.377,2.3453,2.1834,3.8544,2.3446,35,52,14,36,37,47,55,24,95,62,114,133,96,169,103,1.919225329,"2.12599E-05","8.63458E-05","up",2.491778422,"6.64374E-09","3.47198E-08","up",0.740944696,0.134526826,0.190017608,false,1.321282651,0.014976582,0.027400117,"up",-0.578533896,0.166512855,0.291703001,false,-1.147063967,0.00457945,0.022870805,"down",0.585787137,0.173230542,0.629713343,false,-1.16349301,0.000295523,0.002264228,"down",-1.725766748,"7.84596E-08","5.47794E-06","down","chr_002",33268005,33271862,"+","MS02G16280","--","--","--","prunin 1 Pru du 6.0101-like [Malus sylvestris]","PRU01_PRUDU RecName: Full=Prunin 1 Pru du 6.0101 {ECO:0000303|PubMed:21720172}; Short=Pru1 Pru du 6.0101 {ECO:0000303|PubMed:21720172}; AltName: Full=11S globulin {ECO:0000303|PubMed:21720172, ECO:0000303|PubMed:23498967}; AltName: Full=11S seed storage protein {ECO:0000303|PubMed:21720172}; AltName: Full=Allergen Pru du 6.01 {ECO:0000303|PubMed:21720172, ECO:0000303|PubMed:23498967}; AltName: Full=Amandin Pru du 6.0101 {ECO:0000303|PubMed:21720172}; AltName: Allergen=Pru du 6.0101 {ECO:0000303|PubMed:21720172}; Contains: RecName: Full=Prunin 1 Pru du 6.0101 acidic chain {ECO:0000305}; Contains: RecName: Full=Prunin 1 Pru du 6.0101 basic chain {ECO:0000305}; Flags: Precursor;","A0A498JXR5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH98272.1};","--","GO:0043245,extraorganismal space; GO:0045735,nutrient reservoir activity; GO:0034214,protein hexamerization; GO:0048316,seed development; GO:0003674,molecular_function; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0051259,protein complex oligomerization; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF00190.25:Cupin","--","--","--"]
["MS02G16810",3.5718,3.8022,4.6563,7.4729,6.3516,8.0453,6.6264,6.5431,7.9628,3.698,4.9958,5.153,5.6417,6.0218,4.4489,213,226,272,326,331,403,300,277,429,179,255,311,264,281,208,0.389143863,0.045427056,0.081343691,false,0.717643439,0.000284094,0.000742393,false,1.075345848,"1.98568E-09","1.14712E-08","up",1.096823391,"3.79285E-10","2.2125E-09","up",0.720035611,0.00010795,0.000614763,false,0.394782853,0.04040018,0.123113553,false,0.020742262,0.900239313,0.976442617,false,0.702706712,0.000185547,0.001532925,false,0.383127119,0.046133937,0.200996617,false,"chr_002",34167483,34174068,"-","MS02G16810","--","--","--","putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Malus domestica]","PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12775, mitochondrial; Flags: Precursor;","A0A5N5IDX4_9ROSA SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:KAB2636781.1};","FOG: PPR repeat","GO:0005739,mitochondrion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF12854.10:PPR repeat","--","--","--"]
["MS02G18280",4.934,5.0876,3.6377,9.3676,6.4302,10.1162,9.0263,3.475,4.7028,5.5721,8.6465,5.8231,10.6542,10.6841,9.4399,36,37,26,50,41,62,50,18,31,33,54,43,61,61,54,0.729479456,0.041372309,0.075010314,false,1.462138478,"2.45779E-06","9.04396E-06","up",1.12664947,0.001278824,0.002940939,"up",0.616062925,0.181776699,0.24696142,false,-0.103286023,0.819791946,0.887800611,false,-0.832693677,0.037522002,0.116740294,false,-0.514178344,0.236128556,0.692637065,false,0.411972906,0.233827965,0.413733725,false,-0.311042795,0.292439415,0.585361261,false,"chr_002",36852930,36864057,"-","MS02G18280","--","--","--","G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 [Malus domestica]","Y1675_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520; EC=2.7.11.1; Flags: Precursor;","A0A498HUR5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH75196.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0005516,calmodulin binding; GO:0030246,carbohydrate binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0045087,innate immune response; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0002376,immune system process; GO:0006950,response to stress; GO:0006952,defense response; GO:0006955,immune response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","--","--","--","--"]
["MS02G19300",0.4363,0.394,0.7572,1.2824,0.699,0.8311,0.7759,0.6146,0.4347,0.7257,0.6627,0.7545,0.5839,0.697,0.7235,20,18,34,43,28,32,27,20,18,27,26,35,21,25,26,0.627409783,0.136103031,0.206700621,false,0.633651882,0.142273711,0.199389761,false,1.03956558,0.021679139,0.038080724,"up",0.491848669,0.307711845,0.386686973,false,-0.127596257,0.764134022,0.8504283,false,-0.131749076,0.761992697,0.866621072,false,-0.551812671,0.217387085,0.674999014,false,0.427326395,0.287469375,0.475090295,false,0.42807676,0.291363562,0.584160231,false,"chr_002",37959930,37962254,"-","MS02G19300","--","--","--","hypothetical protein C1H46_031401 [Malus baccata]","--","A0A540L982_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD83025.1};","--","--","PF12799.10:Leucine Rich repeats (2 copies)","--","--","--"]
["MS02G20380",1.7908,1.4633,1.7986,4.3825,2.8589,1.6677,1.5218,2.197,0.5435,0.7828,3.4587,1.1701,1.3619,3.5804,2.2841,124,101,122,222,173,97,80,108,34,44,205,82,74,194,124,0.260418644,0.583535943,0.674281326,false,0.802958452,0.01593682,0.028893067,false,1.042943946,0.004836468,0.009888052,"up",0.05348652,0.906495025,0.929458108,false,-0.199901275,0.745064048,0.836400938,false,-0.739258451,0.138949024,0.29719712,false,-0.993581208,0.059569958,0.433201782,false,0.793904578,0.148673812,0.304319063,false,0.264434073,0.543264578,0.786757483,false,"chr_002",39283282,39290089,"+","MS02G20380","--","K13418 somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) LOW QUALITY PROTEIN: somatic embryogenesis receptor kinase 2 (A)","--","hypothetical protein DVH24_011137 [Malus domestica]","Y1561_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g56130; EC=2.7.11.1; Flags: Precursor;","A0A498JZA7_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS02G21360",4.5287,3.8585,1.7656,166.9616,306.3008,126.5769,277.4854,294.8863,188.7956,124.4276,100.6867,82.119,320.1169,135.0312,199.7338,199,169,76,5367,11762,4672,9257,9199,7495,4438,3787,3652,11038,4643,6881,5.105350803,"5.81062E-54","9.7011E-52","up",6.302694822,"8.18281E-65","1.03289E-62","up",6.110605594,"7.71562E-48","6.45555E-46","up",6.511728033,"1.24636E-82","2.45558E-80","up",1.419326251,"3.59032E-08","4.44968E-07","up",0.223717603,0.485923072,0.67103317,false,0.393113142,0.283455831,0.730521307,false,1.02623896,0.004136022,0.019765867,"up",-0.161839734,0.687195912,0.869678399,false,"chr_002",40584907,40586785,"+","MS02G21360","--","K22395 cinnamyl-alcohol dehydrogenase [EC:1.1.1.195] | (RefSeq) berberine bridge enzyme-like 15 (A)","ko00940: Phenylpropanoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","berberine bridge enzyme-like 26 [Malus domestica]","STOX_ARGME RecName: Full=Tetrahydroberberine oxidase {ECO:0000305}; Short=THB oxidase {ECO:0000305}; EC=1.3.3.8 {ECO:0000269|PubMed:21327819}; AltName: Full=(S)-tetrahydroprotoberberine oxidase {ECO:0000303|PubMed:21327819}; Short=AmSTOX {ECO:0000303|PubMed:21327819}; Flags: Precursor;","A0A540LJJ8_MALBA RecName: Full=FAD-binding PCMH-type domain-containing protein {ECO:0000259|PROSITE:PS51387};","--","GO:0071949,FAD binding; GO:0050328,tetrahydroberberine oxidase activity; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0050660,flavin adenine dinucleotide binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0016634,oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","PF01565.26:FAD binding domain","--","--","--"]
["MS02G21520",0,0,0,2.6517,3.8605,1.4057,5.3325,5.7026,4.7611,1.3508,0.5912,0.3333,3.0095,0.3234,1.6137,0,0,0,23,40,14,48,48,51,13,6,4,28,3,15,"NA","NA","NA","NA","NA","NA","NA","NA",7.633536713,"1.46239E-08","7.52442E-08","up",8.67937875,"2.17991E-12","1.61044E-11","up",2.92851156,"2.92168E-08","3.67226E-07","up",1.674269967,0.004540756,0.022710348,"up",1.042218121,0.020134071,0.279565536,false,1.870806196,0.008642717,0.035852814,"up",0.639663934,0.387894292,0.671139451,false,"chr_002",40779793,40783323,"+","MS02G21520","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1-like (A)","ko04626: Plant-pathogen interaction","putative wall-associated receptor kinase-like 16 [Malus domestica]","WAK2_ARATH RecName: Full=Wall-associated receptor kinase 2; EC=2.7.11.-; Flags: Precursor;","A0A314V418_PRUYE SubName: Full=Putative wall-associated receptor kinase-like 16 {ECO:0000313|EMBL:PQM42469.1};","--","GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0005509,calcium ion binding; GO:0030247,polysaccharide binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0007166,cell surface receptor signaling pathway; GO:0009992,cellular water homeostasis; GO:0009311,oligosaccharide metabolic process; GO:0006468,protein phosphorylation; GO:0009751,response to salicylic acid; GO:0009826,unidimensional cell growth; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0030246,carbohydrate binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0006884,cell volume homeostasis; GO:0008361,regulation of cell size; GO:0016043,cellular component organization; GO:0019725,cellular homeostasis; GO:0030104,water homeostasis; GO:0032535,regulation of cellular component size; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0055082,cellular chemical homeostasis; GO:0065008,regulation of biological quality; GO:0071840,cellular component organization or biogenesis; GO:0090066,regulation of anatomical structure size; GO:0005975,carbohydrate metabolic process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0010033,response to organic substance; GO:0014070,response to organic cyclic compound; GO:0042221,response to chemical; GO:1901700,response to oxygen-containing compound; GO:0000902,cell morphogenesis; GO:0009653,anatomical structure morphogenesis; GO:0016049,cell growth; GO:0032502,developmental process; GO:0040007,growth; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0060560,developmental growth involved in morphogenesis; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS02G22350",39.6882,40.9505,51.1069,147.0318,160.2316,139.5254,153.7158,161.0923,110.4491,169.6933,171.6609,174.6369,168.0329,137.0861,166.4385,1511,1554,1906,4095,5331,4462,4443,4354,3799,5244,5594,6729,5020,4084,4968,2.15954934,"7.91668E-59","1.69526E-56","up",2.136117993,"3.12958E-43","1.78798E-41","up",1.983163491,"1.36597E-33","5.80411E-32","up",1.985227647,"2.55281E-21","3.79541E-20","up",-0.163479271,0.406701602,0.558698409,false,-0.137781359,0.501999671,0.684360653,false,-0.003093224,0.988685681,0.996732602,false,-0.158353432,0.271243846,0.457368521,false,-0.126430976,0.451218213,0.723160296,false,"chr_002",41997799,42001910,"+","MS02G22350","--","K11517 (S)-2-hydroxy-acid oxidase [EC:1.1.3.15] | (RefSeq) (S)-2-hydroxy-acid oxidase GLO1-like isoform X1 (A)","ko00630: Glyoxylate and dicarboxylate metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01200: Carbon metabolism; ko04146: Peroxisome","glycolate oxidase 1 isoform X1 [Malus sylvestris]","GLO1_ARATH RecName: Full=Glycolate oxidase 1; Short=AtGLO1; Short=GOX1 {ECO:0000303|PubMed:25416784}; EC=1.1.3.15 {ECO:0000269|PubMed:25416784}; AltName: Full=(S)-2-hydroxy-acid oxidase GLO1; AltName: Full=Short chain alpha-hydroxy acid oxidase GLO1;","A0A540KRC8_MALBA RecName: Full=(S)-2-hydroxy-acid oxidase {ECO:0000256|ARBA:ARBA00013087}; EC=1.1.3.15 {ECO:0000256|ARBA:ARBA00013087};","Glycolate oxidase","GO:0048046,apoplast; GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0005829,cytosol; GO:0022626,cytosolic ribosome; GO:0005634,nucleus; GO:0005777,peroxisome; GO:0009506,plasmodesma; GO:0003973,(S)-2-hydroxy-acid oxidase activity; GO:0010181,FMN binding; GO:0003729,mRNA binding; GO:0042742,defense response to bacterium; GO:0050665,hydrogen peroxide biosynthetic process; GO:0009854,oxidative photosynthetic carbon pathway; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0016899,oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0032553,ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0042743,hydrogen peroxide metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0072593,reactive oxygen species metabolic process; GO:1903409,reactive oxygen species biosynthetic process; GO:0009853,photorespiration; GO:0043094,cellular metabolic compound salvage; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0009532,plastid stroma; GO:0005840,ribosome; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0042579,microbody; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF01070.21:FMN-dependent dehydrogenase","--","--","--"]
["MS02G23320",30.5524,26.8079,21.4413,22.6868,49.7499,16.3782,33.1305,48.8806,28.4558,21.8405,13.2664,16.2807,21.4028,13.1162,20.4341,1539,1346,1058,836,2190,693,1267,1748,1295,893,572,830,846,517,807,-0.422535634,0.092444792,0.149288816,false,-0.22869394,0.331747212,0.411991987,false,0.408139085,0.310137824,0.388570811,false,0.775300155,0.002944362,0.006264823,false,1.211738795,"3.51787E-05",0.000227576,"up",1.018391586,0.000240464,0.00202568,"up",0.358956808,0.401497873,0.806805366,false,0.853528509,0.043391386,0.124193513,false,0.667246881,0.105178991,0.334022832,false,"chr_002",43047125,43051549,"-","MS02G23320","--","--","--","MACPF domain-containing protein CAD1 [Malus domestica]","CAD1_ARATH RecName: Full=MACPF domain-containing protein CAD1; AltName: Full=Protein CONSTITUTIVELY ACTIVATED CELL DEATH 1; Short=Protein CAD1;","A0A540KWX4_MALBA RecName: Full=MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412};","--","GO:0008219,cell death; GO:0006955,immune response; GO:0009626,plant-type hypersensitive response; GO:2000031,regulation of salicylic acid mediated signaling pathway; GO:0010337,regulation of salicylic acid metabolic process; GO:0008150,biological_process; GO:0009987,cellular process; GO:0002376,immune system process; GO:0050896,response to stimulus; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0012501,programmed cell death; GO:0033554,cellular response to stress; GO:0034050,programmed cell death induced by symbiont; GO:0043207,response to external biotic stimulus; GO:0044403,biological process involved in symbiotic interaction; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0051707,response to other organism; GO:0051716,cellular response to stimulus; GO:0098542,defense response to other organism; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009751,response to salicylic acid; GO:0009863,salicylic acid mediated signaling pathway; GO:0009966,regulation of signal transduction; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0014070,response to organic cyclic compound; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0042221,response to chemical; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071407,cellular response to organic cyclic compound; GO:0071446,cellular response to salicylic acid stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006082,organic acid metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0008152,metabolic process; GO:0009696,salicylic acid metabolic process; GO:0010565,regulation of cellular ketone metabolic process; GO:0018958,phenol-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042180,cellular ketone metabolic process; GO:0042537,benzene-containing compound metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0062012,regulation of small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901615,organic hydroxy compound metabolic process","PF01823.22:MAC/Perforin domain","--","--","--"]
["MS02G24070",1.9385,1.2584,1.4551,0.5456,0.3915,1.2218,0.1502,0.1606,0.3155,1.1239,1.199,1.7464,1.3805,0.9472,0.7272,34,22,25,7,6,18,2,2,5,16,18,31,19,13,10,-0.001208067,0.997781002,0.998321531,false,-0.312284076,0.518796056,0.597484271,false,-0.908747871,0.11379689,0.16431812,false,-2.587399402,0.000238318,0.000617001,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_002",43932419,43934161,"+","MS02G24070","--","--","--","hypothetical protein DVH24_011428 [Malus domestica]","--","A0A498JYL9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH99103.1};","--","GO:0043743,LPPG:FO 2-phospho-L-lactate transferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor","PF01933.21:2-phospho-L-lactate transferase CofD","--","--","--"]
["MS02G24760",7.4692,8.8674,9.0228,18.1232,14.2808,18.6363,14.1426,11.7048,15.3292,14.6465,16.0709,23.4627,16.4591,19.0905,14.7667,240,284,284,426,401,503,345,267,445,382,442,763,415,480,372,1.281962262,"4.36811E-09","3.27703E-08","up",1.282262237,"7.37532E-14","6.63352E-13","up",1.220209141,"2.99173E-12","2.40842E-11","up",0.982145644,"1.93477E-08","9.16989E-08",false,-0.286465968,0.20346006,0.338377427,false,-0.284584778,0.119092333,0.267134808,false,-0.239067474,0.178160795,0.636267693,false,-0.04328321,0.84700264,0.918494021,false,-0.037080018,0.836218721,0.939150321,false,"chr_002",44684395,44686946,"+","MS02G24760","--","K15109 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29 | (RefSeq) mitochondrial arginine transporter BAC1 isoform X1 (A)","--","mitochondrial arginine transporter BAC1 isoform X1 [Malus domestica]","BAC1_ARATH RecName: Full=Mitochondrial arginine transporter BAC1; AltName: Full=Mitochondrial basic amino acid carrier 1; Short=AtMBAC1;","A0A498JTE5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH99169.1};","Mitochondrial carnitine-acylcarnitine carrier protein","GO:0016021,integral component of membrane; GO:0005743,mitochondrial inner membrane; GO:0005290,L-histidine transmembrane transporter activity; GO:0015189,L-lysine transmembrane transporter activity; GO:0000064,L-ornithine transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:1990575,mitochondrial L-ornithine transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005342,organic acid transmembrane transporter activity; GO:0008324,cation transmembrane transporter activity; GO:0008509,anion transmembrane transporter activity; GO:0008514,organic anion transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015171,amino acid transmembrane transporter activity; GO:0015173,aromatic amino acid transmembrane transporter activity; GO:0015174,basic amino acid transmembrane transporter activity; GO:0015179,L-amino acid transmembrane transporter activity; GO:0046943,carboxylic acid transmembrane transporter activity; GO:1901474,azole transmembrane transporter activity; GO:0003333,amino acid transmembrane transport; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0006820,anion transport; GO:0006865,amino acid transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015711,organic anion transport; GO:0015807,L-amino acid transport; GO:0015822,ornithine transport; GO:0015849,organic acid transport; GO:0034220,ion transmembrane transport; GO:0046942,carboxylic acid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0098655,cation transmembrane transport; GO:0098656,anion transmembrane transport; GO:1902475,L-alpha-amino acid transmembrane transport; GO:1903352,L-ornithine transmembrane transport; GO:1903825,organic acid transmembrane transport; GO:1905039,carboxylic acid transmembrane transport; GO:1990542,mitochondrial transmembrane transport; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005740,mitochondrial envelope; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031966,mitochondrial membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00153.30:Mitochondrial carrier protein","--","--","--"]
["MS02G25660",5.8096,9.556,7.9306,2.4933,3.1694,1.7693,5.5168,4.282,2.318,1.9974,1.5784,0.7342,2.4105,1.1223,2.0679,86,141,115,27,41,22,62,45,31,24,20,11,28,13,24,-2.2594078,"4.08674E-08","2.65131E-07","down",-1.759751854,"1.90942E-06","7.14177E-06","down",-1.422009182,"9.53468E-05",0.000271225,"down",-0.654235083,0.089834537,0.134604758,false,1.610906392,0.002313301,0.008934279,"up",1.120497721,0.019120713,0.069879488,false,0.761480211,0.10228807,0.532874734,false,0.848374146,0.114416572,0.253473931,false,0.366129978,0.444956022,0.718597733,false,"chr_002",45694430,45696567,"+","MS02G25660","--","--","--","hypothetical protein DVH24_011584 [Malus domestica]","--","A0A498JTN7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH99259.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS02G26430",21.286,15.5213,22.4476,4.2518,4.7354,4.3469,3.0638,4.648,3.7721,3.0656,2.9071,2.5923,2.6885,3.3528,2.8288,787,572,813,115,153,135,86,122,126,92,92,97,78,97,82,-2.603514832,"2.09694E-34","1.35004E-32","down",-2.446859387,"4.23096E-31","1.31547E-29","down",-1.932406517,"9.55269E-20","1.57289E-18","down",-2.083181505,"6.6826E-19","8.44909E-18","down",0.532159919,0.041400221,0.098874617,false,0.378620587,0.144209405,0.304890127,false,-0.152781003,0.546557968,0.873124929,false,0.688441414,0.00269595,0.014044769,false,0.540239165,0.017570534,0.106575264,false,"chr_002",46548821,46551404,"-","MS02G26430","--","K08695 anthocyanidin reductase [EC:1.3.1.77] | (RefSeq) anthocyanidin reductase (A)","ko00941: Flavonoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","hypothetical protein DVH24_011654 [Malus domestica]","ANRPN_VITVI RecName: Full=Anthocyanidin reductase ((2S)-flavan-3-ol-forming) {ECO:0000250|UniProtKB:Q5FB34}; Short=VvANR {ECO:0000250|UniProtKB:Q5FB34}; EC=1.3.1.112 {ECO:0000250|UniProtKB:Q5FB34};","A0A498JTW1_MALDO RecName: Full=Epimerase domain-containing protein {ECO:0000259|Pfam:PF01370};","Flavonol reductase/cinnamoyl-CoA reductase","GO:0033729,anthocyanidin reductase activity; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0009813,flavonoid biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0016628,oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process","PF01370.24:NAD dependent epimerase/dehydratase family","--","--","--"]
["MS02G27340",3.6281,2.5562,1.4136,3.8616,1.7114,1.3848,1.751,2.7308,3.4333,1.6378,0.8413,0.903,1.2353,0.8848,1.2364,131,92,50,102,54,42,48,70,112,48,26,33,35,25,35,-0.980240371,0.032119074,0.060347835,false,-0.893532672,0.029391881,0.049767713,false,0.08221602,0.869265585,0.896846024,false,0.327228944,0.419847967,0.501867446,false,1.327173035,0.001227503,0.00518182,"up",1.240733688,0.000513537,0.003816087,"up",0.249953962,0.583238896,0.885988222,false,1.078959651,0.034426064,0.104275887,false,0.997252155,0.030998216,0.155936217,false,"chr_002",47534434,47535977,"-","MS02G27340","--","K20716 mitogen-activated protein kinase kinase kinase 17/18 | (RefSeq) mitogen-activated protein kinase kinase kinase 18-like (A)","ko04016: MAPK signaling pathway - plant","mitogen-activated protein kinase kinase kinase 18-like [Malus domestica]","M3K18_ARATH RecName: Full=Mitogen-activated protein kinase kinase kinase 18 {ECO:0000303|PubMed:26443375}; EC=2.7.11.25 {ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:25680457, ECO:0000269|PubMed:26443375};","A0A5N5HB79_9ROSA SubName: Full=Mitogen-activated protein kinase kinase kinase ANP1-like {ECO:0000313|EMBL:KAB2623853.1};","MEKK and related serine/threonine protein kinases","GO:0005634,nucleus; GO:0005524,ATP binding; GO:0004709,MAP kinase kinase kinase activity; GO:0004672,protein kinase activity; GO:0019901,protein kinase binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0009738,abscisic acid-activated signaling pathway; GO:1902457,negative regulation of stomatal opening; GO:0009789,positive regulation of abscisic acid-activated signaling pathway; GO:1900057,positive regulation of leaf senescence; GO:0046777,protein autophosphorylation; GO:0006468,protein phosphorylation; GO:2000038,regulation of stomatal complex development; GO:0009737,response to abscisic acid; GO:0006970,response to osmotic stress; GO:0007165,signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0019900,kinase binding; GO:0007154,cell communication; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0010118,stomatal movement; GO:0010119,regulation of stomatal movement; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:1902456,regulation of stomatal opening; GO:1990069,stomatal opening; GO:0009787,regulation of abscisic acid-activated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009967,positive regulation of signal transduction; GO:0010646,regulation of cell communication; GO:0010647,positive regulation of cell communication; GO:0023051,regulation of signaling; GO:0023056,positive regulation of signaling; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:1901419,regulation of response to alcohol; GO:1905957,regulation of cellular response to alcohol; GO:0007275,multicellular organism development; GO:0010150,leaf senescence; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0051094,positive regulation of developmental process; GO:0090693,plant organ senescence; GO:0099402,plant organ development; GO:1900055,regulation of leaf senescence; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0009791,post-embryonic development; GO:0009888,tissue development; GO:0010374,stomatal complex development; GO:0048580,regulation of post-embryonic development; GO:0051239,regulation of multicellular organismal process; GO:0090558,plant epidermis development; GO:2000026,regulation of multicellular organismal development; GO:0006950,response to stress; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00069.28:Protein kinase domain","--","--","--"]
["MS02G27680",1.5288,1.5338,1.5607,0,0.1029,0.2677,0,0.3167,0,0.277,0.9981,0.4887,0,0.4022,0.0574,34,34,34,0,2,5,0,5,0,5,19,11,0,7,1,-1.217400956,0.017578265,0.035918636,"down",-3.045023562,"8.23082E-05",0.000237264,"down",-3.392329214,"5.7204E-06","2.00409E-05","down",-3.678354504,"3.82022E-05",0.000113368,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_002",47845071,47846350,"-","MS02G27680","--","--","--","hypothetical protein DVH24_011769 [Malus domestica]","--","A0A498K0I3_MALDO RecName: Full=PGG domain-containing protein {ECO:0000259|Pfam:PF13962};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF12796.10:Ankyrin repeats (3 copies)","--","--","--"]
["MS02G28100",32.2155,29.4941,32.0759,8.7384,7.9349,9.1581,8.7531,7.9871,10.0339,9.6553,10.4219,9.4566,7.6401,7.2924,8.9828,892,814,870,177,192,213,184,157,251,217,247,265,166,158,195,-1.481800976,"4.05396E-28","1.74888E-26","down",-1.679420763,"4.69714E-28","1.23544E-26","down",-1.647780422,"1.78289E-29","5.96019E-28","down",-1.525332524,"9.99669E-24","1.73008E-22","down",-0.031336355,0.856548051,0.912268154,false,0.169342272,0.37695378,0.57303021,false,0.120452398,0.506170774,0.857127008,false,-0.14942554,0.379059041,0.569451775,false,0.056879219,0.760303855,0.904556065,false,"chr_002",48137618,48140391,"+","MS02G28100","--","K10047 inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase [EC:3.1.3.25 3.1.3.93] | (RefSeq) inositol monophosphatase 1 (A)","ko00053: Ascorbate and aldarate metabolism; ko00562: Inositol phosphate metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01240: Biosynthesis of cofactors; ko04070: Phosphatidylinositol signaling system","inositol monophosphatase 1 [Malus domestica]","IMP1_SOLLC RecName: Full=Inositol monophosphatase 1; Short=IMP 1; Short=IMPase 1; Short=LeIMP1; EC=3.1.3.25; AltName: Full=Inositol-1(or 4)-monophosphatase 1;","A0A5N5IGE2_9ROSA RecName: Full=Inositol-1-monophosphatase {ECO:0000256|RuleBase:RU364068}; EC=3.1.3.25 {ECO:0000256|RuleBase:RU364068};","Inositol monophosphatase","GO:0008934,inositol monophosphate 1-phosphatase activity; GO:0052832,inositol monophosphate 3-phosphatase activity; GO:0052833,inositol monophosphate 4-phosphatase activity; GO:0052834,inositol monophosphate phosphatase activity; GO:0000287,magnesium ion binding; GO:0006021,inositol biosynthetic process; GO:0006020,inositol metabolic process; GO:0046855,inositol phosphate dephosphorylation; GO:0046854,phosphatidylinositol phosphate biosynthetic process; GO:0007165,signal transduction; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0052745,inositol phosphate phosphatase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0005975,carbohydrate metabolic process; GO:0006066,alcohol metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0019751,polyol metabolic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046165,alcohol biosynthetic process; GO:0046173,polyol biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0009056,catabolic process; GO:0016311,dephosphorylation; GO:0019637,organophosphate metabolic process; GO:0043647,inositol phosphate metabolic process; GO:0044282,small molecule catabolic process; GO:0046164,alcohol catabolic process; GO:0046174,polyol catabolic process; GO:0046434,organophosphate catabolic process; GO:0046838,phosphorylated carbohydrate dephosphorylation; GO:0071545,inositol phosphate catabolic process; GO:1901575,organic substance catabolic process; GO:1901616,organic hydroxy compound catabolic process; GO:0006629,lipid metabolic process; GO:0006644,phospholipid metabolic process; GO:0006650,glycerophospholipid metabolic process; GO:0006661,phosphatidylinositol biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0008654,phospholipid biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0045017,glycerolipid biosynthetic process; GO:0046474,glycerophospholipid biosynthetic process; GO:0046486,glycerolipid metabolic process; GO:0046488,phosphatidylinositol metabolic process; GO:0090407,organophosphate biosynthetic process; GO:0007154,cell communication; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation","PF00459.28:Inositol monophosphatase family","--","--","--"]
["MS03G00540",9.9528,10.1945,11.4683,29.2472,21.4824,17.8086,30.6154,21.0294,22.7585,35.6103,26.5629,48.8466,53.9999,65.4996,54.8835,334,341,377,718,630,502,780,501,690,970,763,1659,1422,1720,1444,2.004180049,"9.39969E-17","1.66929E-15","up",2.756472751,"5.59253E-85","1.26097E-82","up",1.337097859,"1.27663E-08","6.62352E-08","up",1.522267425,"3.8677E-14","3.37333E-13","up",-0.468154626,0.083814605,0.172387059,false,-1.220719048,"4.62262E-10","1.77916E-08","down",0.181533876,0.490446719,0.851459802,false,-0.646529225,0.027356167,0.087509525,false,-1.394637738,"1.01556E-09","1.25108E-07","down","chr_003",949584,952298,"-","MS03G00540","--","--","--","uncharacterized protein LOC103444535 [Malus domestica]","--","A0A5N5I8G8_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2634752.1};","--","--","--","--","--","--"]
["MS03G01850",2.8803,3.112,3.5435,3.1296,2.5353,3.6048,3.9884,4.6814,4.823,4.5493,6.2987,4.4513,4.9882,6.3235,4.9926,39,42,47,31,30,41,41,45,59,50,73,61,53,67,53,0.86417349,0.003697312,0.009097651,false,1.067158349,0.000238827,0.000632495,"up",0.169443633,0.611828194,0.679768532,false,0.784620375,0.009631881,0.018406247,false,-0.067477528,0.821425691,0.888890816,false,-0.266854174,0.357868424,0.554600424,false,0.61455058,0.056448498,0.42413786,false,-0.679662561,0.039775577,0.116118961,false,-0.872693298,0.005472447,0.046415328,false,"chr_003",3432796,3433876,"-","MS03G01850","--","K02977 ubiquitin-small subunit ribosomal protein S27Ae | (RefSeq) ubiquitin-40S ribosomal protein S27a-like (A)","ko03010: Ribosome; ko04120: Ubiquitin mediated proteolysis","hypothetical protein DVH24_009339 [Malus domestica]","RS27A_SOLLC RecName: Full=Ubiquitin-40S ribosomal protein S27a; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=40S ribosomal protein S27a; Flags: Precursor;","A0A498IPU3_MALDO RecName: Full=Ubiquitin-like domain-containing protein {ECO:0000259|PROSITE:PS50053};","Ubiquitin/40S ribosomal protein S27a fusion","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0005840,ribosome; GO:0046872,metal ion binding; GO:0003729,mRNA binding; GO:0031386,protein tag; GO:0003735,structural constituent of ribosome; GO:0031625,ubiquitin protein ligase binding; GO:0019941,modification-dependent protein catabolic process; GO:0016567,protein ubiquitination; GO:0006412,translation; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0044389,ubiquitin-like protein ligase binding; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009987,cellular process; GO:0019538,protein metabolic process; GO:0030163,protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:0070647,protein modification by small protein conjugation or removal; GO:0006518,peptide metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle","PF00240.26:Ubiquitin family","--","--","--"]
["MS03G02930",0.0614,0.2157,0.2509,0.6299,2.7067,1.7554,2.7919,1.6443,1.3941,2.2707,1.8662,2.0944,1.4093,1.2955,1.8024,2,7,8,15,77,48,69,38,41,60,52,69,36,33,46,3.756501104,"3.74244E-14","5.11058E-13","up",3.391417223,"1.63981E-10","1.03871E-09","up",3.504667364,"6.96272E-07","2.80259E-06","up",3.76070149,"5.19882E-11","3.31827E-10","up",0.012344942,0.973267494,0.984775474,false,0.379736744,0.325038786,0.522015322,false,0.244723547,0.655725935,0.910465817,false,-0.230551882,0.648625257,0.792686635,false,0.144321897,0.780176654,0.914568242,false,"chr_003",5407610,5417237,"-","MS03G02930","--","K05909 laccase [EC:1.10.3.2] | (RefSeq) laccase-15-like (A)","--","laccase-15-like [Malus domestica]","LAC15_ARATH RecName: Full=Laccase-15; EC=1.10.3.2; AltName: Full=Benzenediol:oxygen oxidoreductase 15; AltName: Full=Diphenol oxidase 15; AltName: Full=Protein TRANSPARENT TESTA 10; AltName: Full=Urishiol oxidase 15; Flags: Precursor;","A0A498IX49_MALDO RecName: Full=Laccase {ECO:0000256|ARBA:ARBA00012297, ECO:0000256|RuleBase:RU361119}; EC=1.10.3.2 {ECO:0000256|ARBA:ARBA00012297, ECO:0000256|RuleBase:RU361119}; AltName: Full=Benzenediol:oxygen oxidoreductase {ECO:0000256|RuleBase:RU361119}; AltName: Full=Diphenol oxidase {ECO:0000256|RuleBase:RU361119}; AltName: Full=Urishiol oxidase {ECO:0000256|RuleBase:RU361119};","Multicopper oxidases","GO:0048046,apoplast; GO:0005507,copper ion binding; GO:0052716,hydroquinone:oxygen oxidoreductase activity; GO:0016491,oxidoreductase activity; GO:0009813,flavonoid biosynthetic process; GO:0009809,lignin biosynthetic process; GO:0046274,lignin catabolic process; GO:0010023,proanthocyanidin biosynthetic process; GO:0046688,response to copper ion; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016679,oxidoreductase activity, acting on diphenols and related substances as donors; GO:0016682,oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0006725,cellular aromatic compound metabolic process; GO:0009698,phenylpropanoid metabolic process; GO:0009699,phenylpropanoid biosynthetic process; GO:0009808,lignin metabolic process; GO:0009987,cellular process; GO:0019438,aromatic compound biosynthetic process; GO:0019748,secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044550,secondary metabolite biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:0009056,catabolic process; GO:0019439,aromatic compound catabolic process; GO:0044248,cellular catabolic process; GO:0046271,phenylpropanoid catabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901575,organic substance catabolic process; GO:0018130,heterocycle biosynthetic process; GO:0018958,phenol-containing compound metabolic process; GO:0046189,phenol-containing compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF07731.17:Multicopper oxidase","--","--","--"]
["MS03G03940",7.9188,5.6334,1.4698,28.3412,179.5824,27.2533,51.0144,100.7954,20.558,125.761,58.3682,62.0255,36.329,43.2388,91.4534,55,39,10,144,1090,159,269,497,129,709,347,436,198,235,498,4.228497221,"1.08144E-08","7.63986E-08","up",3.781457231,"3.78981E-07","1.5645E-06","up",4.210552213,0.000121253,0.000338422,"up",3.812624198,"1.96621E-05","6.11613E-05","up",-0.402493796,0.444286725,0.594741221,false,0.042114492,0.954586391,0.976788537,false,-0.412533066,0.700023308,0.923260137,false,0.0094215,0.992243627,0.995821808,false,0.461749076,0.635717326,0.840029704,false,"chr_003",6836479,6836775,"-","MS03G03940","--","K24028 salicylic acid 3-hydroxylase [EC:1.14.11.-] | (RefSeq) LOW QUALITY PROTEIN: protein DOWNY MILDEW RESISTANCE 6 (A)","--","hypothetical protein C1H46_035631 [Malus baccata]","ODD19_ORYSJ RecName: Full=2-oxoglutarate-dependent dioxygenase 19 {ECO:0000303|PubMed:25728912}; EC=1.14.11.- {ECO:0000255|PROSITE-ProRule:PRU00805, ECO:0000269|PubMed:25728912}; AltName: Full=Melatonin 2-hydroxylase {ECO:0000303|PubMed:25728912};","A0A540KX46_MALBA RecName: Full=Fe2OG dioxygenase domain-containing protein {ECO:0000259|PROSITE:PS51471};","Iron/ascorbate family oxidoreductases","GO:0005737,cytoplasm; GO:0051213,dioxygenase activity; GO:0031418,L-ascorbic acid binding; GO:0046872,metal ion binding; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005488,binding; GO:0019842,vitamin binding; GO:0030246,carbohydrate binding; GO:0031406,carboxylic acid binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0043177,organic acid binding; GO:0048029,monosaccharide binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF14226.9:non-haem dioxygenase in morphine synthesis N-terminal","--","--","--"]
["MS03G04880",0.7113,0.9332,0.9496,0.1496,0.0626,0.228,0,0.2312,0.1211,0.4045,0.6393,0.2703,0.1743,0,0.0698,26,34,34,4,2,7,0,6,4,12,20,10,5,0,2,-0.809075491,0.089281639,0.144941038,false,-3.108578731,"4.24364E-05",0.000128256,"down",-2.36044482,0.000152207,0.000417,"down",-2.614246759,0.000306944,0.000781012,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_003",8436037,8439497,"-","MS03G04880","--","K01179 endoglucanase [EC:3.2.1.4] | (RefSeq) endoglucanase 24-like (A)","ko00500: Starch and sucrose metabolism; ko01100: Metabolic pathways","endoglucanase 24-like [Malus sylvestris]","GUN24_ARATH RecName: Full=Endoglucanase 24; EC=3.2.1.4; AltName: Full=Endo-1,4-beta glucanase 24; Flags: Precursor;","A0A540KPL4_MALBA RecName: Full=Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};","--","GO:0005576,extracellular region; GO:0008810,cellulase activity; GO:0030245,cellulose catabolic process; GO:0010047,fruit dehiscence; GO:1990059,fruit valve development; GO:0009828,plant-type cell wall loosening; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0000272,polysaccharide catabolic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009251,glucan catabolic process; GO:0009987,cellular process; GO:0016052,carbohydrate catabolic process; GO:0030243,cellulose metabolic process; GO:0043170,macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044247,cellular polysaccharide catabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0044275,cellular carbohydrate catabolic process; GO:0051273,beta-glucan metabolic process; GO:0051275,beta-glucan catabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0000003,reproduction; GO:0009900,dehiscence; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032504,multicellular organism reproduction; GO:0048609,multicellular organismal reproductive process; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0032502,developmental process; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0009664,plant-type cell wall organization; GO:0009827,plant-type cell wall modification; GO:0016043,cellular component organization; GO:0042545,cell wall modification; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00759.22:Glycosyl hydrolase family 9","--","--","--"]
["MS03G06140",14.7104,13.4438,14.5914,5.4546,3.6801,3.9705,5.3343,7.0469,6.4602,5.1361,4.9401,5.2961,3.5671,5.2515,3.5703,247,225,240,67,54,56,68,84,98,70,71,90,47,69,47,-1.287770709,"2.76796E-11","2.76992E-10","down",-1.495518836,"1.09713E-10","7.08789E-10","down",-1.497650136,"3.11803E-10","1.99857E-09","down",-0.900691993,"1.62166E-05","5.11442E-05",false,0.400885706,0.108677252,0.210148809,false,0.611063404,0.03533471,0.111663123,false,0.59579273,0.040122083,0.371283373,false,-0.191216732,0.503932804,0.684532381,false,0.02518036,0.937671083,0.980326143,false,"chr_003",11177042,11179333,"-","MS03G06140","--","K03020 DNA-directed RNA polymerases I and III subunit RPAC2 | (RefSeq) DNA-directed RNA polymerases I and III subunit RPAC2 (A)","ko03020: RNA polymerase","DNA-directed RNA polymerases I and III subunit RPAC2 [Malus domestica]","NRPBB_ARATH RecName: Full=DNA-directed RNA polymerases II, IV and V subunit 11; AltName: Full=DNA-directed RNA polymerase II 13.6 kDa polypeptide; AltName: Full=DNA-directed RNA polymerase II subunit J; AltName: Full=DNA-directed RNA polymerase II subunit RPB11; Short=RNA polymerase II subunit B11;","A0A498IYW4_MALDO RecName: Full=RNA_pol_L_2 domain-containing protein {ECO:0000259|Pfam:PF13656};","DNA-directed RNA polymerase, subunit L","GO:0005665,RNA polymerase II, core complex; GO:0000418,RNA polymerase IV complex; GO:0000419,RNA polymerase V complex; GO:0003677,DNA binding; GO:0046983,protein dimerization activity; GO:0001055,RNA polymerase II activity; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0003824,catalytic activity; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034062,5'-3' RNA polymerase activity; GO:0097747,RNA polymerase activity; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0000428,DNA-directed RNA polymerase complex; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0016591,RNA polymerase II, holoenzyme; GO:0030880,RNA polymerase complex; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0055029,nuclear DNA-directed RNA polymerase complex; GO:0061695,transferase complex, transferring phosphorus-containing groups; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF13656.9:RNA polymerase Rpb3/Rpb11 dimerisation domain","--","--","--"]
["MS03G06680",17.1421,18.139,14.3826,5.5026,4.9967,7.0868,3.5722,3.9163,4.6255,8.9098,7.9909,6.6908,6.3905,6.5829,6.8095,1005,1060,826,236,256,349,159,163,245,424,401,397,294,302,313,-0.886848239,"3.44993E-06","1.63353E-05",false,-1.038167222,"7.12958E-11","4.69221E-10","down",-1.291525702,"1.6866E-11","1.25813E-10","down",-1.75664374,"1.09578E-21","1.67005E-20","down",-0.856083693,"3.21472E-05",0.00020978,false,-0.701304278,"4.79532E-05",0.000521828,false,-0.465151236,0.02114617,0.283208732,false,-0.38837891,0.066978016,0.172204052,false,-0.22820509,0.19718867,0.474033084,false,"chr_003",12478225,12480731,"+","MS03G06680","--","K19041 E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27] | (RefSeq) RING-H2 finger protein ATL65 (A)","--","hypothetical protein C1H46_045367 [Malus baccata]","ATL65_ARATH RecName: Full=RING-H2 finger protein ATL65; EC=2.3.2.27 {ECO:0000305}; AltName: Full=RING-type E3 ubiquitin transferase ATL65 {ECO:0000305};","A0A540K4H5_MALBA RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483}; EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};","FOG: Predicted E3 ubiquitin ligase","GO:0009507,chloroplast; GO:0016021,integral component of membrane; GO:0031982,vesicle; GO:0046872,metal ion binding; GO:0016740,transferase activity; GO:0031625,ubiquitin protein ligase binding; GO:0016567,protein ubiquitination; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0044389,ubiquitin-like protein ligase binding; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane","PF13639.9:Ring finger domain","--","--","--"]
["MS03G08900",2.5814,4.7855,4.2965,8.5916,4.4951,10.2883,6.1351,4.5847,6.8947,6.2913,8.4574,8.539,5.5066,8.1755,6.9429,46,85,75,112,70,154,83,58,111,91,129,154,77,114,97,1.183412881,"4.46176E-05",0.000170436,"up",1.114876796,0.000208426,0.000558545,"up",1.20487399,0.001327404,0.00304209,"up",0.878607939,0.005541025,0.0111352,false,-0.290741159,0.251383926,0.395985793,false,-0.218922748,0.416659036,0.61032212,false,-0.325342965,0.334573422,0.769041985,false,0.036982862,0.908876804,0.952062449,false,0.113180511,0.730948807,0.889942855,false,"chr_003",20539421,20540763,"-","MS03G08900","--","K05278 flavonol synthase [EC:1.14.20.6] | (RefSeq) flavonol synthase/flavanone 3-hydroxylase-like (A)","ko00941: Flavonoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","2-oxoglutarate-dependent dioxygenase 11-like [Pyrus x bretschneideri]","ODD11_ORYSJ RecName: Full=2-oxoglutarate-dependent dioxygenase 11 {ECO:0000303|PubMed:25728912}; EC=1.14.11.- {ECO:0000255|PROSITE-ProRule:PRU00805, ECO:0000269|PubMed:25728912}; AltName: Full=Melatonin 2-hydroxylase {ECO:0000303|PubMed:25728912};","A0A5N5H225_9ROSA SubName: Full=Protein SRG1-like {ECO:0000313|EMBL:KAB2620142.1};","Iron/ascorbate family oxidoreductases","GO:0005737,cytoplasm; GO:0051213,dioxygenase activity; GO:0031418,L-ascorbic acid binding; GO:0046872,metal ion binding; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005488,binding; GO:0019842,vitamin binding; GO:0030246,carbohydrate binding; GO:0031406,carboxylic acid binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0043177,organic acid binding; GO:0048029,monosaccharide binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF14226.9:non-haem dioxygenase in morphine synthesis N-terminal","--","--","--"]
["MS03G09960",1.3918,1.0927,1.256,2.3161,1.3387,1.3207,2.0723,3.0117,3.7731,0.497,1.0133,0.7175,1.388,1.0311,0.9004,69,54,61,84,58,55,78,106,169,20,43,36,54,40,35,-0.568504509,0.100695373,0.160550824,false,0.122863839,0.696007363,0.756252556,false,0.622898915,0.067048371,0.103385762,false,1.522014108,"1.59506E-07","6.69391E-07","up",2.102854506,"3.05079E-09","4.57795E-08","up",1.416108725,"1.29955E-05",0.000170116,"up",0.8995639520000001,0.00985477,0.200528064,false,1.208907527,0.003000709,0.015290095,"up",0.52496202,0.15385561,0.413554092,false,"chr_003",22818041,22821189,"+","MS03G09960","--","no KO assigned | (RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g50270-like (A)","--","pentatricopeptide repeat-containing protein At2g21090 [Malus domestica]","PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090;","A0A498IWP8_MALDO RecName: Full=PLCXc domain-containing protein {ECO:0000259|SMART:SM00148};","FOG: PPR repeat","--","PF01535.23:PPR repeat","--","--","--"]
["MS03G11060",5.5788,7.9413,3.4886,0.7586,0.7687,0.7998,0.1924,0.7406,1.0022,2.5549,2.8323,1.6162,1.1539,1.829,2.0863,191,271,117,19,23,23,5,18,31,71,83,56,31,49,56,-1.102320946,0.002674448,0.006815507,"down",-1.464269559,"5.8186E-05",0.000171709,"down",-2.660817842,"1.24603E-11","9.41505E-11","down",-2.862670681,"8.52436E-09","4.22666E-08","down",-1.746714869,0.000992282,0.004303323,"down",-1.378588906,0.010056967,0.04267195,"down",-0.200558505,0.736185634,0.934300002,false,-1.541684951,"5.48009E-05",0.000544689,"down",-1.171552034,0.002480024,0.026367971,"down","chr_003",24541104,24542903,"+","MS03G11060","--","--","--","NAC domain-containing protein 22-like [Malus domestica]","NAC6_SOYBN RecName: Full=NAC domain-containing protein 6 {ECO:0000303|PubMed:16919368}; Short=GmNAC6 {ECO:0000303|PubMed:16919368};","A0A498IZP0_MALDO RecName: Full=NAC domain-containing protein {ECO:0000259|PROSITE:PS51005};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02365.18:No apical meristem (NAM) protein","NAC","TF","NAC"]
["MS03G12240",17.8212,18.5503,21.1679,7.0536,9.021,6.4274,9.251,9.8259,10.8941,8.0641,9.1543,8.2614,9.0721,5.0067,7.8613,373,387,434,108,165,113,147,146,206,137,164,175,149,82,129,-0.988961097,"6.71396E-10","5.6094E-09",false,-1.09353214,"5.65504E-06","1.97159E-05","down",-1.130008079,"2.9705E-07","1.26272E-06","down",-0.656794907,"8.16372E-05",0.000229318,false,0.344762757,0.060601417,0.133548786,false,0.452604918,0.088558034,0.216566498,false,0.46927659,0.054398327,0.417038716,false,-0.123405251,0.613122565,0.767730862,false,-0.009057381,0.976660607,0.992906026,false,"chr_003",26764236,26766164,"+","MS03G12240","--","K12394 AP-1 complex subunit sigma 1/2 | (RefSeq) AP-1 complex subunit sigma-1 (A)","--","AP-1 complex subunit sigma-1 [Malus domestica]","AP1S1_ARATH RecName: Full=AP-1 complex subunit sigma-1; AltName: Full=Adaptor AP-1 19 kDa protein; AltName: Full=Adaptor protein complex AP-1 sigma-1 subunit; AltName: Full=Adaptor-related protein complex 1 sigma-1 subunit; AltName: Full=Clathrin assembly protein complex 1 sigma-1 small chain; AltName: Full=Clathrin assembly small subunit protein AP19-1; Short=AtAP19-1; AltName: Full=Sigma 1 subunit of AP-1 clathrin; AltName: Full=Sigma-adaptin 1; AltName: Full=Sigma1-adaptin;","A0A5N5FHG5_9ROSA RecName: Full=AP complex subunit sigma {ECO:0000256|PIRNR:PIRNR015588};","Clathrin adaptor complex, small subunit","GO:0030121,AP-1 adaptor complex; GO:0043231,intracellular membrane-bounded organelle; GO:0035615,clathrin adaptor activity; GO:0006886,intracellular protein transport; GO:0016192,vesicle-mediated transport; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0030276,clathrin binding; GO:0030674,protein-macromolecule adaptor activity; GO:0060090,molecular adaptor activity; GO:0140312,cargo adaptor activity; GO:0006810,transport; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0005798,Golgi-associated vesicle; GO:0012505,endomembrane system; GO:0012506,vesicle membrane; GO:0012510,trans-Golgi network transport vesicle membrane; GO:0016020,membrane; GO:0030117,membrane coat; GO:0030118,clathrin coat; GO:0030119,AP-type membrane coat adaptor complex; GO:0030120,vesicle coat; GO:0030125,clathrin vesicle coat; GO:0030130,clathrin coat of trans-Golgi network vesicle; GO:0030131,clathrin adaptor complex; GO:0030133,transport vesicle; GO:0030135,coated vesicle; GO:0030136,clathrin-coated vesicle; GO:0030140,trans-Golgi network transport vesicle; GO:0030658,transport vesicle membrane; GO:0030659,cytoplasmic vesicle membrane; GO:0030660,Golgi-associated vesicle membrane; GO:0030662,coated vesicle membrane; GO:0030665,clathrin-coated vesicle membrane; GO:0031090,organelle membrane; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0048475,coated membrane; GO:0097708,intracellular vesicle; GO:0098588,bounding membrane of organelle; GO:0098796,membrane protein complex; GO:0110165,cellular anatomical entity","PF01217.23:Clathrin adaptor complex small chain","--","--","--"]
["MS03G12590",7.2167,9.4014,7.0006,0.2454,0.4519,0.6411,0.2838,0.1011,0.4769,0.575,1.3423,0.8514,0.6863,0.9177,0.4579,201,261,191,5,11,15,6,2,12,13,32,24,15,20,10,-2.914666436,"9.10272E-20","2.12308E-18","down",-3.226932164,"1.88503E-22","3.34003E-21","down",-3.913042198,"4.31799E-25","1.0808E-23","down",-4.450202114,"5.59637E-25","1.04844E-23","down",-1.547616415,0.022442952,0.0599675,false,"NA","NA","NA","NA","NA","NA","NA","NA",-0.990751598,0.097636471,0.226901883,false,"NA","NA","NA","NA","chr_003",27297046,27300048,"+","MS03G12590","--","--","--","hypothetical protein DVH24_034766 [Malus domestica]","--","A0A498IXG3_MALDO RecName: Full=AB hydrolase-1 domain-containing protein {ECO:0000259|Pfam:PF00561};","Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)","--","PF00561.23:alpha/beta hydrolase fold","--","--","--"]
["MS03G13380",1.0626,1.8013,2.4314,5.4096,2.4739,4.275,4.199,2.3743,3.4069,2.7085,1.9692,2.4619,3.1753,2.4818,2.5238,29,49,65,108,59,98,87,46,84,60,46,68,68,53,54,0.629083778,0.092143442,0.148867249,false,0.92911433,0.00877911,0.016895268,false,1.410732268,0.00056102,0.001384354,"up",1.205066633,0.001479044,0.003341299,"up",0.589337017,0.070570738,0.150985342,false,0.291556325,0.351207888,0.548320219,false,-0.20597787,0.569746808,0.881223736,false,0.797637919,0.025546513,0.083219724,false,0.504455056,0.139322906,0.39165845,false,"chr_003",28350041,28352392,"+","MS03G13380","--","K00224 chloroplastic oxoene reductase [EC:1.3.1.-] | (RefSeq) chloroplast envelope quinone oxidoreductase homolog (A)","ko00592: alpha-Linolenic acid metabolism; ko01110: Biosynthesis of secondary metabolites","chloroplast envelope quinone oxidoreductase homolog [Pyrus x bretschneideri]","QORH_ARATH RecName: Full=Chloroplast envelope quinone oxidoreductase homolog {ECO:0000303|PubMed:20424175}; Short=ceQORH {ECO:0000303|PubMed:20424175}; EC=1.3.1.- {ECO:0000269|PubMed:26678323};","A0A5N5F211_9ROSA SubName: Full=Quinone-oxidoreductase-like protein {ECO:0000313|EMBL:KAB2597066.1};","Zinc-binding oxidoreductase","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009706,chloroplast inner membrane; GO:0009535,chloroplast thylakoid membrane; GO:0005829,cytosol; GO:0000325,plant-type vacuole; GO:0005886,plasma membrane; GO:0016491,oxidoreductase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009528,plastid inner membrane; GO:0016020,membrane; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031969,chloroplast membrane; GO:0042170,plastid membrane; GO:0009534,chloroplast thylakoid; GO:0009579,thylakoid; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane; GO:0005773,vacuole; GO:0071944,cell periphery","PF13602.9:Zinc-binding dehydrogenase","--","--","--"]
["MS03G14630",8.4646,6.3801,8.3276,1.8585,2.8105,3.185,2.3107,0.9885,2.5243,4.4306,3.7404,3.8568,1.6767,2.6342,3.3564,193,145,186,31,56,61,40,16,52,82,73,89,30,47,60,-0.757763795,0.00113071,0.003158785,false,-1.306700007,"6.91186E-06","2.38265E-05","down",-1.341506628,"2.34071E-06","8.72267E-06","down",-1.704713292,"5.04225E-07","1.98396E-06","down",-0.937177721,0.013095604,0.038402311,false,-0.385537865,0.378984701,0.574742167,false,-0.367039526,0.395204136,0.803272228,false,-0.567816886,0.069341575,0.176553679,false,-0.011484038,0.975823107,0.992862359,false,"chr_003",30644599,30648015,"-","MS03G14630","--","K03676 glutaredoxin 3 | (RefSeq) monothiol glutaredoxin-S10-like (A)","--","glutaredoxin-C5, chloroplastic-like isoform X1 [Malus sylvestris]","GRXC5_ARATH RecName: Full=Glutaredoxin-C5, chloroplastic {ECO:0000303|PubMed:15170506}; Short=AtGrxC5 {ECO:0000303|PubMed:15170506}; Flags: Precursor;","A0A498IXU9_MALDO RecName: Full=Glutaredoxin domain-containing protein {ECO:0000259|Pfam:PF00462};","Glutaredoxin and related proteins","GO:0009507,chloroplast; GO:0005737,cytoplasm; GO:0015038,glutathione disulfide oxidoreductase activity; GO:0097573,glutathione oxidoreductase activity; GO:0034599,cellular response to oxidative stress; GO:0016226,iron-sulfur cluster assembly; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0015036,disulfide oxidoreductase activity; GO:0016491,oxidoreductase activity; GO:0016667,oxidoreductase activity, acting on a sulfur group of donors; GO:0015035,protein-disulfide reductase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006950,response to stress; GO:0006979,response to oxidative stress; GO:0008150,biological_process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0062197,cellular response to chemical stress; GO:0070887,cellular response to chemical stimulus; GO:0006790,sulfur compound metabolic process; GO:0008152,metabolic process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0031163,metallo-sulfur cluster assembly; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00462.27:Glutaredoxin","--","--","--"]
["MS03G15770",1.5581,1.8411,1.838,1.7512,8.5582,1.1954,2.8276,7.4134,4.1391,7.7209,1.2945,2.6001,1.765,1.9027,2.8264,45,53,52,37,216,29,62,152,108,181,32,76,40,43,64,1.369999221,0.018073055,0.036792289,"up",0.601387422,0.055593075,0.087543458,false,1.391593377,0.03783873,0.062509081,false,1.744643596,"6.45269E-06","2.16326E-05","up",0.393851392,0.524232017,0.665385258,false,1.158779899,0.004018686,0.020569215,"up",0.344246725,0.619395479,0.898562672,false,0.047367596,0.965833589,0.982657184,false,0.82428527,0.218203277,0.501048665,false,"chr_003",32019892,32021126,"-","MS03G15770","--","K14516 ethylene-responsive transcription factor 1 | (RefSeq) ethylene-responsive transcription factor 1B-like (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction","ethylene-responsive transcription factor 1B-like [Malus domestica]","ERFC3_SOLLC RecName: Full=Ethylene-response factor C3 {ECO:0000305}; Short=Sl.ERF.C.3 {ECO:0000303|PubMed:23057995}; AltName: Full=Ethylene-responsive element-binding factor C3 {ECO:0000305}; AltName: Full=Ethylene-responsive transcription factor C3 {ECO:0000305};","A0A498IVL4_MALDO RecName: Full=AP2/ERF domain-containing protein {ECO:0000259|PROSITE:PS51032};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0043565,sequence-specific DNA binding; GO:0006952,defense response; GO:0009873,ethylene-activated signaling pathway; GO:0045893,positive regulation of DNA-templated transcription; GO:0031347,regulation of defense response; GO:0010104,regulation of ethylene-activated signaling pathway; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009723,response to ethylene; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0048583,regulation of response to stimulus; GO:0080134,regulation of response to stress; GO:0009966,regulation of signal transduction; GO:0010646,regulation of cell communication; GO:0023051,regulation of signaling; GO:0070297,regulation of phosphorelay signal transduction system; GO:1902531,regulation of intracellular signal transduction; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00847.23:AP2 domain","AP2/ERF-ERF","TF","AP2/ERF->AP2/ERF-ERF"]
["MS03G16570",15.9859,15.9783,16.1976,30.5824,24.9427,29.0189,21.7356,25.8425,29.9662,14.5387,16.9847,18.0881,18.9565,18.6295,19.6309,806,803,800,1128,1099,1229,832,925,1365,595,733,923,750,735,776,0.22809866,0.071397569,0.11977687,false,0.54099404,"2.43987E-06","8.9836E-06",false,1.024279978,"2.50806E-14","2.52486E-13","up",0.966762718,"1.61084E-10","9.7801E-10",false,0.752840135,"5.47524E-06","4.32147E-05",false,0.442286168,0.004886798,0.024032763,false,-0.057667378,0.735324903,0.933700243,false,0.813642555,"3.60554E-08","8.47975E-07",false,0.508170707,0.000176158,0.003412116,false,"chr_003",33479039,33484486,"+","MS03G16570","--","--","--","hypothetical protein DVH24_021800 [Malus domestica]","DA2_ARATH RecName: Full=E3 ubiquitin-protein ligase DA2 {ECO:0000305}; EC=2.3.2.27 {ECO:0000269|PubMed:24045020}; AltName: Full=RING-type E3 ubiquitin transferase DA2 {ECO:0000305};","A0A498IWB3_MALDO RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};","Putative Zn-finger protein","GO:0046872,metal ion binding; GO:0061630,ubiquitin protein ligase activity; GO:0016567,protein ubiquitination; GO:0046620,regulation of organ growth; GO:0080113,regulation of seed growth; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0004842,ubiquitin-protein transferase activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0061659,ubiquitin-like protein ligase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0035265,organ growth; GO:0040007,growth; GO:0040008,regulation of growth; GO:0048589,developmental growth; GO:0048638,regulation of developmental growth; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0065007,biological regulation; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0080112,seed growth; GO:2000241,regulation of reproductive process","--","--","--","--"]
["MS03G17780",0.7526,0.7207,0.8032,0.982,0.8221,0.6109,0.4506,0.2891,0.4165,0.1686,1.1191,0.338,0.3052,0.1749,0.0873,22,21,23,21,21,15,10,6,11,4,28,10,7,4,2,-0.325998094,0.6265113,0.711148323,false,"NA","NA","NA","NA",0.300508123,0.504532086,0.581432659,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-0.994995413,0.072301914,0.468306124,false,0.641919979,0.372912103,0.563407093,false,2.036533961,0.002943988,0.029890649,"up","chr_003",35257095,35259830,"+","MS03G17780","--","--","--","metal tolerance protein 10-like [Malus domestica]","MTP10_ARATH RecName: Full=Metal tolerance protein 10; Short=AtMTP10;","A0A540MWK8_MALBA RecName: Full=ZT_dimer domain-containing protein {ECO:0000259|Pfam:PF16916};","Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily)","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0005774,vacuolar membrane; GO:0008324,cation transmembrane transporter activity; GO:0009787,regulation of abscisic acid-activated signaling pathway; GO:2000022,regulation of jasmonic acid mediated signaling pathway; GO:2000031,regulation of salicylic acid mediated signaling pathway; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009738,abscisic acid-activated signaling pathway; GO:0009755,hormone-mediated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901419,regulation of response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:1905957,regulation of cellular response to alcohol; GO:0009753,response to jasmonic acid; GO:0009867,jasmonic acid mediated signaling pathway; GO:0070542,response to fatty acid; GO:0071395,cellular response to jasmonic acid stimulus; GO:0071398,cellular response to fatty acid; GO:0009751,response to salicylic acid; GO:0009863,salicylic acid mediated signaling pathway; GO:0014070,response to organic cyclic compound; GO:0071407,cellular response to organic cyclic compound; GO:0071446,cellular response to salicylic acid stimulus; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle","PF01545.24:Cation efflux family","--","--","--"]
["MS03G18600",6.5836,5.6265,4.8736,0.7193,0.5727,1.3445,0.8114,0.7954,0.8665,1.5178,2.6238,1.547,0.8668,1.312,1.2277,513,437,372,41,39,88,48,44,61,96,175,122,53,80,75,-1.412117888,"3.23732E-08","2.13493E-07","down",-2.039576114,"1.33457E-18","1.82496E-17","down",-2.497986664,"2.2044E-15","2.4555E-14","down",-2.508534838,"2.98643E-27","6.36891E-26","down",-1.085127946,0.000378935,0.001865838,"down",-0.453324758,0.115113595,0.261204398,false,-0.009096331,0.980410966,0.993968149,false,-1.074468791,0.005041084,0.023174293,"down",-0.435587577,0.239856723,0.527504924,false,"chr_003",36957374,36961900,"+","MS03G18600","--","K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor protein kinase CLAVATA1-like (A)","--","hypothetical protein DVH24_022006 [Malus domestica]","BAME3_ARATH RecName: Full=Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 {ECO:0000303|PubMed:16367950}; EC=2.7.11.1 {ECO:0000255|PROSITE-ProRule:PRU00159}; AltName: Full=Protein BARELY ANY MERISTEM 3 {ECO:0000303|PubMed:16367950}; Flags: Precursor;","A0A498IYZ2_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0042802,identical protein binding; GO:0042277,peptide binding; GO:0001653,peptide receptor activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0030154,cell differentiation; GO:0048437,floral organ development; GO:0009755,hormone-mediated signaling pathway; GO:0010078,maintenance of root meristem identity; GO:0010088,phloem development; GO:0006468,protein phosphorylation; GO:0045595,regulation of cell differentiation; GO:0010075,regulation of meristem growth; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0033218,amide binding; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0099402,plant organ development; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071495,cellular response to endogenous stimulus; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0010015,root morphogenesis; GO:0010073,meristem maintenance; GO:0010074,maintenance of meristem identity; GO:0019827,stem cell population maintenance; GO:0022622,root system development; GO:0048364,root development; GO:0048507,meristem development; GO:0098727,maintenance of cell number; GO:1905392,plant organ morphogenesis; GO:0010087,phloem or xylem histogenesis; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0050793,regulation of developmental process; GO:0035266,meristem growth; GO:0040007,growth; GO:0040008,regulation of growth; GO:0048589,developmental growth; GO:0048638,regulation of developmental growth; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS03G19900",14.6913,15.043,13.0906,5.521,5.1416,5.5896,4.7214,5.4758,4.9734,7.7125,12.0913,10.4755,6.0477,6.9034,6.8901,291,297,254,80,89,93,71,77,89,124,205,210,94,107,107,-0.320030899,0.114740746,0.178995078,false,-0.819919008,"1.21213E-05","4.01557E-05",false,-1.186094303,"2.10636E-09","1.21284E-08","down",-1.217883135,"4.25617E-09","2.18124E-08","down",-0.88403877,0.000298673,0.001514208,false,-0.38190699,0.096550262,0.230295991,false,-0.032762264,0.89051487,0.974731137,false,-0.849015346,0.000408069,0.0029687,false,-0.340743299,0.122465659,0.363592881,false,"chr_003",38294195,38295388,"+","MS03G19900","--","K17362 acyl-coenzyme A thioesterase 13 [EC:3.1.2.-] | (RefSeq) acyl-coenzyme A thioesterase 13-like (A)","--","uncharacterized protein LOC126587975 [Malus sylvestris]","--","A0A498IUJ9_MALDO RecName: Full=4HBT domain-containing protein {ECO:0000259|Pfam:PF03061};","HGG motif-containing thioesterase","GO:0047617,acyl-CoA hydrolase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016289,CoA hydrolase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016790,thiolester hydrolase activity","PF03061.25:Thioesterase superfamily","--","--","--"]
["MS03G20440",2.3114,3.1622,1.9306,0.1436,0,0,0,0,0.2035,0.356,1.0127,0.6229,0.1674,0.1007,0.1005,88,120,72,4,0,0,0,0,7,11,33,24,5,3,3,-1.72145589,"2.6969E-05",0.000107625,"down",-4.037485927,"3.20695E-13","2.71492E-12","down",-5.609209891,"1.60693E-11","1.20322E-10","down",-4.78168892,"3.66143E-11","2.37367E-10","down",-3.110098825,0.003249912,0.011964361,"down","NA","NA","NA","NA","NA","NA","NA","NA",-3.828188848,0.000429265,0.003095921,"down","NA","NA","NA","NA","chr_003",38877253,38879230,"+","MS03G20440","--","K19996 phosphatidylinositol transfer protein SFH5 | (RefSeq) patellin-4-like (A)","--","hypothetical protein C1H46_002414 [Malus baccata]","PATL4_ARATH RecName: Full=Patellin-4;","A0A540NNB9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE12020.1};","Phosphatidylinositol transfer protein SEC14 and related proteins","GO:0005829,cytosol; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0008289,lipid binding; GO:0007049,cell cycle; GO:0051301,cell division; GO:0071365,cellular response to auxin stimulus; GO:1901703,protein localization involved in auxin polar transport; GO:0003674,molecular_function; GO:0005488,binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009733,response to auxin; GO:0010033,response to organic substance; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071495,cellular response to endogenous stimulus; GO:0006810,transport; GO:0008104,protein localization; GO:0009914,hormone transport; GO:0009926,auxin polar transport; GO:0010817,regulation of hormone levels; GO:0033036,macromolecule localization; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0060918,auxin transport; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0070727,cellular macromolecule localization; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0016020,membrane; GO:0071944,cell periphery","PF00650.23:CRAL/TRIO domain","--","--","--"]
["MS03G21960",1.0762,1.3441,1.5022,0.4804,0.5278,0.5752,0.4918,0.6806,0.4862,0.7847,1.5395,0.5859,0.6157,0.4771,0.5603,49,61,67,16,21,22,17,22,20,29,60,27,22,17,20,-0.25661893,0.529784122,0.625850513,false,-0.950351723,0.007636703,0.014910451,false,-1.089968002,0.00246002,0.00533757,"down",-0.962637455,0.009534018,0.01823915,false,-0.692928921,0.161361016,0.284944736,false,0.005164326,0.990795812,0.99578469,false,0.127977019,0.774462114,0.945443694,false,-0.82220053,0.094525109,0.221814025,false,-0.11413119,0.793321357,0.920708511,false,"chr_003",40693373,40697201,"-","MS03G21960","--","--","--","uncharacterized protein LOC103429672 [Malus domestica]","--","A0A498IY36_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH86383.1};","--","GO:0016021,integral component of membrane; GO:0046873,metal ion transmembrane transporter activity; GO:0015693,magnesium ion transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0008150,biological_process; GO:0030001,metal ion transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF01544.21:CorA-like Mg2+ transporter protein","--","--","--"]
["MS03G22800",4.3298,6.4082,5.0411,1.9322,1.167,2.0235,1.0841,1.2601,2.0992,0.8376,1.4005,0.9546,0.8664,1.4633,1.3008,242,357,276,79,57,95,46,50,106,38,67,54,38,64,57,-2.126182882,"2.35043E-15","3.64766E-14","down",-1.830588196,"5.66786E-12","4.19788E-11","down",-1.419590609,"3.48007E-07","1.46306E-06","down",-1.548456726,"1.17542E-07","5.0228E-07","down",0.589298378,0.103763401,0.202940179,false,0.298497117,0.401024804,0.596258296,false,-0.12859901,0.714889517,0.927114687,false,0.721553625,0.03341434,0.102000341,false,0.435231633,0.188597899,0.462591469,false,"chr_003",41627028,41630162,"-","MS03G22800","--","K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) systemin receptor SR160 (A)","ko04075: Plant hormone signal transduction","calmodulin-binding receptor kinase CaMRLK-like [Malus sylvestris]","CARLK_ARATH RecName: Full=Calmodulin-binding receptor kinase CaMRLK {ECO:0000305}; EC=2.7.11.1 {ECO:0000269|PubMed:14720124}; AltName: Full=Calmodulin-binding receptor-like kinase {ECO:0000303|PubMed:14720124}; Short=AtCaMRLK {ECO:0000303|PubMed:14720124}; AltName: Full=Protein MATERNAL EFFECT EMBRYO ARREST 62 {ECO:0000303|PubMed:15634699}; Flags: Precursor;","A0A498ISX6_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0005516,calmodulin binding; GO:0004672,protein kinase activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0009793,embryo development ending in seed dormancy; GO:0046777,protein autophosphorylation; GO:0009733,response to auxin; GO:0009625,response to insect; GO:0006970,response to osmotic stress; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0006950,response to stress; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["MS03G23590",3.0611,3.2294,1.9007,0.9922,0.7222,0.9392,0.9145,1.2002,2.0958,0.311,1.2167,0.5301,0.2815,0.4436,0.7245,97,102,59,23,20,25,22,27,60,8,33,17,7,11,18,-1.829798226,0.000156506,0.000538095,"down",-2.215138264,"5.30921E-07","2.15114E-06","down",-1.423479588,0.000149969,0.000411589,"down",-0.685778368,0.084265593,0.127402622,false,1.152124864,0.045115677,0.105726587,false,1.545897332,0.003491632,0.018411571,"up",0.739129591,0.096622924,0.523323761,false,0.420897629,0.464451379,0.64998577,false,0.816857762,0.116839453,0.354014634,false,"chr_003",42543440,42545877,"-","MS03G23590","--","--","--","hypothetical protein DVH24_017275 [Malus domestica]","NAC73_ARATH RecName: Full=NAC domain-containing protein 73 {ECO:0000303|PubMed:15029955}; Short=ANAC073 {ECO:0000303|PubMed:15029955}; AltName: Full=Protein SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 2 {ECO:0000303|PubMed:18952777};","A0A498IWZ2_MALDO RecName: Full=NAC domain-containing protein {ECO:0000259|PROSITE:PS51005};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0045893,positive regulation of DNA-templated transcription; GO:2000652,regulation of secondary cell wall biogenesis; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009832,plant-type cell wall biogenesis; GO:0009834,plant-type secondary cell wall biogenesis; GO:0042546,cell wall biogenesis; GO:0044085,cellular component biogenesis; GO:0044087,regulation of cellular component biogenesis; GO:0071554,cell wall organization or biogenesis; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:1903338,regulation of cell wall organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02365.18:No apical meristem (NAM) protein","NAC","TF","NAC"]
["MS03G24160",1.1552,0.9658,1.0024,0.5527,0.4186,0.8251,0.3043,0.4882,0.4475,0.4507,0.2924,0.5897,0.3435,0.246,0.3684,60,50,51,21,19,36,12,18,21,19,13,31,14,10,15,-1.030530072,0.008007549,0.018053795,"down",-1.413233526,0.000392766,0.000999235,"down",-0.594085238,0.111322097,0.161190023,false,-1.053446755,0.00619982,0.012344041,"down",-0.004798899,0.992432441,0.996044092,false,"NA","NA","NA","NA",-0.45665841,0.333764585,0.768219982,false,0.455744609,0.353079135,0.543627347,false,0.842004558,0.086092681,0.297323315,false,"chr_003",43025063,43027283,"-","MS03G24160","--","K03798 cell division protease FtsH [EC:3.4.24.-] | (RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic (A)","--","pentatricopeptide repeat-containing protein At2g33760 [Malus domestica]","PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760;","A0A498ISG3_MALDO RecName: Full=DYW_deaminase domain-containing protein {ECO:0000259|Pfam:PF14432};","FOG: PPR repeat","GO:0043231,intracellular membrane-bounded organelle; GO:0003723,RNA binding; GO:0008270,zinc ion binding; GO:0009451,RNA modification; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016070,RNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0110165,cellular anatomical entity","PF13041.9:PPR repeat family","--","--","--"]
["MS03G24350",127.8926,61.7579,111.3303,1011.3769,889.1123,915.6283,1407.8008,1226.5755,1112.5423,757.2694,908.5734,822.3136,1203.2991,885.1529,702.496,3266,1572,2785,18894,19842,19641,27294,22237,25668,15697,19860,21253,24113,17688,14065,3.232091177,"4.52428E-37","3.45471E-35","up",3.511048671,"4.20648E-34","1.57874E-32","up",3.442314353,"1.15653E-37","6.24063E-36","up",3.926936307,"1.23888E-48","7.34199E-47","up",0.705435562,"5.41928E-06","4.28206E-05",false,0.429211371,0.064624186,0.172903906,false,0.480973932,0.003461144,0.11639575,false,0.226549627,0.080963943,0.198097178,false,-0.043071992,0.849812194,0.944100663,false,"chr_003",43160542,43162238,"+","MS03G24350","--","K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] | (RefSeq) asparagine synthetase [glutamine-hydrolyzing] 1 (A)","ko00250: Alanine, aspartate and glutamate metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01230: Biosynthesis of amino acids","stem-specific protein TSJT1-like [Malus domestica]","TSJT1_TOBAC RecName: Full=Stem-specific protein TSJT1;","A0A5N5FDL0_9ROSA SubName: Full=Stem-specific protein TSJT1-like {ECO:0000313|EMBL:KAB2601185.1};","--","--","PF12481.11:Aluminium induced protein","--","--","--"]
["MS03G25030",4.9933,3.9337,2.7026,0.5726,5.7714,1.2567,1.8319,16.2858,6.4728,11.6634,4.7765,1.4569,1.7937,1.4347,1.8807,298,234,158,25,301,63,83,690,349,565,244,88,84,67,88,0.832596149,0.319122595,0.416978768,false,-0.899509104,0.001777277,0.003973615,false,-0.36829051,0.700987054,0.758072845,false,1.367307751,0.108270732,0.158243885,false,0.550558755,0.616059539,0.740700384,false,2.282293214,0.005870364,0.027883726,"up",1.7262259,0.148542095,0.603091404,false,-1.175973004,0.320664739,0.511749973,false,0.566176906,0.402970102,0.684079959,false,"chr_003",43970388,43972939,"-","MS03G25030","--","--","--","hypothetical protein DVH24_017105 [Malus domestica]","R13L4_ARATH RecName: Full=Disease resistance RPP13-like protein 4; AltName: Full=Disease resistance protein ZAR1 {ECO:0000305}; AltName: Full=Protein HOPZ-ACTIVATED RESISTANCE 1 {ECO:0000303|PubMed:20368970}; Short=AtZAR1 {ECO:0000303|PubMed:28652264};","A0A498IW93_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH86052.1};","--","GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0043531,ADP binding; GO:0043621,protein self-association; GO:0042742,defense response to bacterium; GO:0050829,defense response to Gram-negative bacterium; GO:0050776,regulation of immune response; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0002376,immune system process; GO:0002682,regulation of immune system process; GO:0006955,immune response; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery","PF12799.10:Leucine Rich repeats (2 copies)","--","--","--"]
["MS03G26120",70.0277,64.3065,53.4713,12.0623,19.2053,14.5389,15.8071,20.2851,17.6393,14.6977,14.8863,12.6423,13.674,11.5473,14.3388,3968,3632,2968,500,951,692,680,816,903,676,722,725,608,512,637,-1.968291275,"3.34787E-31","1.79552E-29","down",-1.957083043,"2.90136E-30","8.65631E-29","down",-1.816605528,"1.40178E-14","1.4468E-13","down",-1.524148611,"1.53504E-16","1.63273E-15","down",0.457170525,0.008797654,0.027708855,false,0.448456822,0.010840641,0.045205715,false,0.288797712,0.239965764,0.695475355,false,0.169924521,0.471849845,0.65668659,false,0.167985026,0.476934638,0.741046476,false,"chr_003",45300473,45304537,"+","MS03G26120","--","K13412 calcium-dependent protein kinase [EC:2.7.11.1] | (RefSeq) calcium-dependent protein kinase 2-like (A)","ko04626: Plant-pathogen interaction","calcium-dependent protein kinase 2-like [Malus sylvestris]","CDPKL_ARATH RecName: Full=Calcium-dependent protein kinase 21; EC=2.7.11.1;","A0A498IR15_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH85928.1};","Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0005524,ATP binding; GO:0005509,calcium ion binding; GO:0009931,calcium-dependent protein serine/threonine kinase activity; GO:0005516,calmodulin binding; GO:0004683,calmodulin-dependent protein kinase activity; GO:0004672,protein kinase activity; GO:0019903,protein phosphatase binding; GO:0106310,protein serine kinase activity; GO:0035556,intracellular signal transduction; GO:0018105,peptidyl-serine phosphorylation; GO:0046777,protein autophosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0003824,catalytic activity; GO:0004674,protein serine/threonine kinase activity; GO:0010857,calcium-dependent protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0019902,phosphatase binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0018193,peptidyl-amino acid modification; GO:0018209,peptidyl-serine modification; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0016020,membrane; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF00069.28:Protein kinase domain","--","--","--"]
["MS03G27140",1.2736,1.0327,1.2823,0,0.0399,0,0,0,0,0.3654,0.3669,0.3448,0.0222,0.1338,0,73,59,72,0,2,0,0,0,0,17,18,20,1,6,0,-1.551714428,"5.86412E-06","2.66232E-05","down",-4.233721899,"4.25949E-10","2.58607E-09","down",-6.176507186,"1.36159E-08","7.03493E-08","down",-7.911647458,"1.55897E-10","9.49425E-10","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_003",45972648,45980455,"+","MS03G27140","--","K13436 pto-interacting protein 1 [EC:2.7.11.1] | (RefSeq) PTI1-like tyrosine-protein kinase 1 isoform X1 (A)","ko04626: Plant-pathogen interaction","probable LRR receptor-like serine/threonine-protein kinase At1g53420 isoform X1 [Pyrus x bretschneideri]","Y5344_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g53440; EC=2.7.11.1; Flags: Precursor;","A0A498IRI9_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF11721.11:Malectin domain","--","--","--"]
["MS03G27660",2.428,1.5997,1.6277,1.5852,3.4418,1.6394,2.0525,2.6544,2.0457,5.7592,3.0059,3.3658,3.2788,2.5934,4.5297,67,44,44,32,83,38,43,52,51,129,71,94,71,56,98,1.296385593,0.000490249,0.001499414,"up",1.16748901,0.000401567,0.001019956,"up",0.468259872,0.286770159,0.363694795,false,0.534815473,0.112580317,0.16357025,false,-0.74577874,0.042044774,0.100127754,false,-0.61783026,0.055076727,0.154242465,false,0.062100875,0.884845366,0.97339717,false,-0.807791762,0.075969198,0.188698649,false,-0.670559785,0.111338764,0.345042849,false,"chr_003",46546946,46549878,"-","MS03G27660","--","--","--","nudix hydrolase 2 [Malus domestica]","NUDT2_ARATH RecName: Full=Nudix hydrolase 2 {ECO:0000303|PubMed:15878881}; Short=AtNUDT2 {ECO:0000303|PubMed:15878881}; EC=3.6.1.- {ECO:0000269|PubMed:15878881}; AltName: Full=ADP-ribose pyrophosphatase {ECO:0000303|PubMed:15878881}; EC=3.6.1.13 {ECO:0000269|PubMed:15878881}; AltName: Full=NADH pyrophosphatase {ECO:0000303|PubMed:15878881}; EC=3.6.1.22 {ECO:0000269|PubMed:15878881};","A0A540MUS5_MALBA RecName: Full=Nudix hydrolase domain-containing protein {ECO:0000259|PROSITE:PS51462};","Predicted NUDIX hydrolase FGF-2 and related proteins","GO:0005829,cytosol; GO:0047631,ADP-ribose diphosphatase activity; GO:0046872,metal ion binding; GO:0051287,NAD binding; GO:0000210,NAD+ diphosphatase activity; GO:0035529,NADH pyrophosphatase activity; GO:0006979,response to oxidative stress; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0000166,nucleotide binding; GO:0036094,small molecule binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0004551,dinucleotide phosphatase activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF18290.4:Nudix hydrolase domain","--","--","--"]
["MS04G00690",0.949,1.6802,1.3107,1.7933,3.4176,1.1298,2.8677,4.0103,3.9855,0.1032,0.0326,0.1103,0.3557,0.3924,0.2848,34,60,46,47,107,34,78,102,129,3,1,4,10,11,8,-3.795617068,"1.75483E-08","1.2029E-07","down",-1.637781072,0.000458161,0.001151523,"down",0.92536718,0.056373336,0.088748418,false,1.744985727,"1.31531E-08","6.36371E-08","up",5.554163462,"9.41292E-21","5.75018E-19","up",3.399612131,"1.83319E-18","2.78736E-16","up",0.813884378,0.064244598,0.447489024,false,4.744645382,"2.21758E-10","8.44974E-09","up",2.593063066,"3.03875E-06",0.000123865,"up","chr_004",500691,502709,"+","MS04G00690","--","--","--","BTB/POZ domain-containing protein At3g19850-like [Malus sylvestris]","Y3985_ARATH RecName: Full=BTB/POZ domain-containing protein At3g19850;","A0A498I6L3_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH79076.1};","--","GO:0016567,protein ubiquitination; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF03000.17:NPH3 family","--","--","--"]
["MS04G01530",3.5474,3.3268,2.6176,0.7379,0.9928,0.5508,1.0412,1.9824,0.6188,1.5201,0.9235,0.6477,1.5478,1.6015,1.6476,184,172,133,28,45,24,41,73,29,64,41,34,63,65,67,-1.432177658,"5.73924E-05",0.000215065,"down",-0.695622869,0.003606967,0.007577992,false,-1.833447505,"2.5774E-08","1.27802E-07","down",-1.096080557,0.008451402,0.016360567,"down",0.345910163,0.515798569,0.658417928,false,-0.38764048,0.366743076,0.562919804,false,0.734712901,0.157250345,0.613864031,false,-0.385970788,0.418418093,0.606589776,false,-1.110778033,0.001262439,0.016132912,"down","chr_004",1119039,1123995,"+","MS04G01530","--","--","--","MACPF domain-containing protein At1g14780 isoform X1 [Malus domestica]","MACP1_ARATH RecName: Full=MACPF domain-containing protein At1g14780;","A0A498IB00_MALDO RecName: Full=MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412};","--","GO:0009626,plant-type hypersensitive response; GO:2000031,regulation of salicylic acid mediated signaling pathway; GO:0002376,immune system process; GO:0006950,response to stress; GO:0006952,defense response; GO:0006955,immune response; GO:0008150,biological_process; GO:0008219,cell death; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009987,cellular process; GO:0012501,programmed cell death; GO:0033554,cellular response to stress; GO:0034050,programmed cell death induced by symbiont; GO:0043207,response to external biotic stimulus; GO:0044403,biological process involved in symbiotic interaction; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0045087,innate immune response; GO:0050896,response to stimulus; GO:0051702,biological process involved in interaction with symbiont; GO:0051707,response to other organism; GO:0051716,cellular response to stimulus; GO:0098542,defense response to other organism; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009751,response to salicylic acid; GO:0009863,salicylic acid mediated signaling pathway; GO:0009966,regulation of signal transduction; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0014070,response to organic cyclic compound; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0042221,response to chemical; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071407,cellular response to organic cyclic compound; GO:0071446,cellular response to salicylic acid stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound","PF01823.22:MAC/Perforin domain","--","--","--"]
["MS04G02120",4.2156,3.544,3.5066,0.2401,0.469,0.8829,0.18,0.2474,0.3888,1.4908,1.9837,1.5813,1.1441,0.9478,1.2696,216,181,176,9,21,38,7,9,18,62,87,82,46,38,51,-0.975035245,"1.01672E-05","4.39575E-05",false,-1.453883161,"3.06698E-09","1.67386E-08","down",-2.610629373,"2.5783E-11","1.88228E-10","down",-3.4876327,"1.06313E-22","1.71333E-21","down",-2.503455635,"7.72009E-10","1.27721E-08","down",-2.023073664,"4.63612E-06","6.91247E-05","down",-0.884800556,0.160960975,0.616297911,false,-1.622983743,0.000295391,0.002263842,"down",-1.135372808,0.015990522,0.099489405,false,"chr_004",1647628,1650749,"+","MS04G02120","--","--","--","hypothetical protein DVH24_040345 [Malus domestica]","HMGYA_MAIZE RecName: Full=HMG-Y-related protein A; Short=ZmHMGA; AltName: Full=High mobility group A protein;","A0A498I628_MALDO RecName: Full=H15 domain-containing protein {ECO:0000259|PROSITE:PS51504};","--","GO:0005730,nucleolus; GO:0000786,nucleosome; GO:0005634,nucleus; GO:0003690,double-stranded DNA binding; GO:0031492,nucleosomal DNA binding; GO:0043565,sequence-specific DNA binding; GO:0030261,chromosome condensation; GO:0045910,negative regulation of DNA recombination; GO:0006334,nucleosome assembly; GO:2000014,regulation of endosperm development; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003682,chromatin binding; GO:0031490,chromatin DNA binding; GO:0031491,nucleosome binding; GO:0044877,protein-containing complex binding; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0051276,chromosome organization; GO:0071840,cellular component organization or biogenesis; GO:0000018,regulation of DNA recombination; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006310,DNA recombination; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009892,negative regulation of metabolic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051052,regulation of DNA metabolic process; GO:0051053,negative regulation of DNA metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006325,chromatin organization; GO:0006338,chromatin remodeling; GO:0022607,cellular component assembly; GO:0034728,nucleosome organization; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0065003,protein-containing complex assembly; GO:0065004,protein-DNA complex assembly; GO:0071824,protein-DNA complex subunit organization; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009888,tissue development; GO:0009960,endosperm development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0061458,reproductive system development; GO:2000241,regulation of reproductive process; GO:0006351,DNA-templated transcription; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0051252,regulation of RNA metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0000785,chromatin; GO:0005694,chromosome; GO:0032991,protein-containing complex; GO:0032993,protein-DNA complex; GO:0044815,DNA packaging complex","PF00538.22:linker histone H1 and H5 family","--","--","--"]
["MS04G03180",10.4845,6.3874,3.8156,37.6268,52.6292,16.6674,67.0052,84.2382,51.6786,22.5164,8.0303,12.8632,27.5293,20.8871,18.0997,331,201,118,869,1452,442,1606,1888,1474,577,217,411,682,516,448,1.269141344,0.004561187,0.010984243,"up",1.97238654,"7.77663E-09","4.02485E-08","up",2.598996974,"3.12554E-08","1.53095E-07","up",3.576953877,"6.80977E-24","1.19241E-22","up",2.323977348,"8.92772E-10","1.46168E-08","up",1.618116092,"1.9795E-10","8.20042E-09","up",0.971544745,0.017978388,0.267695478,false,1.353634258,0.004893824,0.022647698,"up",0.655118285,0.099257545,0.32329267,false,"chr_004",2548710,2550059,"-","MS04G03180","--","K20725 MAP kinase substrate 1 | (RefSeq) protein MKS1-like (A)","ko04016: MAPK signaling pathway - plant","VQ motif-containing protein 20-like [Malus domestica]","MKS1_ARATH RecName: Full=Protein MKS1; AltName: Full=Protein MAP kinase 4 substrate 1; AltName: Full=VQ motif-containing protein 21 {ECO:0000303|PubMed:22535423}; Short=AtVQ21 {ECO:0000303|PubMed:22535423};","A0A540M103_MALBA RecName: Full=VQ domain-containing protein {ECO:0000259|Pfam:PF05678};","--","GO:0005634,nucleus; GO:0006952,defense response; GO:0002758,innate immune response-activating signal transduction; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0002218,activation of innate immune response; GO:0002253,activation of immune response; GO:0002376,immune system process; GO:0002682,regulation of immune system process; GO:0002684,positive regulation of immune system process; GO:0002757,immune response-activating signal transduction; GO:0002764,immune response-regulating signaling pathway; GO:0002831,regulation of response to biotic stimulus; GO:0002833,positive regulation of response to biotic stimulus; GO:0006955,immune response; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009987,cellular process; GO:0023052,signaling; GO:0031347,regulation of defense response; GO:0031349,positive regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0032103,positive regulation of response to external stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0045087,innate immune response; GO:0045088,regulation of innate immune response; GO:0045089,positive regulation of innate immune response; GO:0048518,positive regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050776,regulation of immune response; GO:0050778,positive regulation of immune response; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051707,response to other organism; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0098542,defense response to other organism; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF05678.17:VQ motif","--","--","--"]
["MS04G03970",3.0008,4.3925,5.7375,4.2197,3.4901,5.0365,1.4741,1.5418,2.4503,5.1969,5.4742,4.8607,5.2346,6.8681,5.3334,244,356,457,251,248,344,91,89,180,343,381,400,334,437,340,0.434219889,0.071209852,0.119516235,false,0.706275069,0.003830581,0.007999426,false,0.170506482,0.521011235,0.597062198,false,-0.980745584,0.000834835,0.001967859,false,-1.398624401,"1.85922E-09","2.88596E-08","down",-1.667809346,"8.58426E-12","4.75856E-10","down",-1.14908257,"6.73484E-06",0.00221095,"down",-0.24692877,0.174316087,0.339413591,false,-0.510571301,0.010537843,0.074741025,false,"chr_004",3238593,3245692,"+","MS04G03970","--","K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] | (RefSeq) phosphoenolpyruvate carboxylase 4-like isoform X1 (A)","ko00620: Pyruvate metabolism; ko00710: Carbon fixation in photosynthetic organisms; ko01100: Metabolic pathways; ko01200: Carbon metabolism","phosphoenolpyruvate carboxylase 4-like isoform X1 [Malus domestica]","CAPP4_ARATH RecName: Full=Phosphoenolpyruvate carboxylase 4; Short=AtPPC4; Short=PEPC 4; Short=PEPCase 4; EC=4.1.1.31;","A0A498I6K3_MALDO RecName: Full=Phosphoenolpyruvate carboxylase {ECO:0000256|ARBA:ARBA00012305}; EC=4.1.1.31 {ECO:0000256|ARBA:ARBA00012305};","--","GO:0005829,cytosol; GO:0008964,phosphoenolpyruvate carboxylase activity; GO:0015977,carbon fixation; GO:0015979,photosynthesis; GO:0006099,tricarboxylic acid cycle; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004611,phosphoenolpyruvate carboxykinase activity; GO:0016829,lyase activity; GO:0016830,carbon-carbon lyase activity; GO:0016831,carboxy-lyase activity; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0071704,organic substance metabolic process; GO:0009987,cellular process; GO:0044237,cellular metabolic process; GO:0006091,generation of precursor metabolites and energy; GO:0009060,aerobic respiration; GO:0015980,energy derivation by oxidation of organic compounds; GO:0044238,primary metabolic process; GO:0045333,cellular respiration; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF00311.20:Phosphoenolpyruvate carboxylase","--","--","--"]
["MS04G04060",25.3609,17.9043,11.284,27.3198,51.9515,19.6327,35.3304,54.6839,45.0914,32.7707,15.0175,18.2939,30.1947,21.2799,29.9825,2845,2002,1240,2242,5093,1850,3009,4355,4570,2984,1442,2077,2658,1868,2637,0.474995881,0.198608405,0.28250494,false,0.864854055,0.002776282,0.005979948,false,1.08742822,0.00859919,0.016648389,"up",1.585004082,"1.97714E-07","8.19905E-07","up",1.126761909,0.000577832,0.002693451,"up",0.736336046,0.001056501,0.006910079,false,0.49217941,0.191955489,0.648935218,false,0.635813002,0.136315668,0.286403143,false,0.251734837,0.48914083,0.750294836,false,"chr_004",3354681,3360706,"+","MS04G04060","--","K01530 phospholipid-translocating ATPase [EC:7.6.2.1] | (RefSeq) putative phospholipid-transporting ATPase 9 (A)","--","hypothetical protein DVH24_040522 [Malus domestica]","ALA9_ARATH RecName: Full=Putative phospholipid-transporting ATPase 9 {ECO:0000303|PubMed:11402198}; Short=AtALA9 {ECO:0000303|PubMed:11402198}; EC=7.6.2.1 {ECO:0000305|PubMed:11402198}; AltName: Full=Aminophospholipid flippase 9 {ECO:0000303|PubMed:11402198};","A0A498IBL3_MALDO RecName: Full=Phospholipid-transporting ATPase {ECO:0000256|RuleBase:RU362033}; EC=7.6.2.1 {ECO:0000256|RuleBase:RU362033};","P-type ATPase","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0140326,ATPase-coupled intramembrane lipid transporter activity; GO:0000287,magnesium ion binding; GO:0045332,phospholipid translocation; GO:1901703,protein localization involved in auxin polar transport; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0005215,transporter activity; GO:0005319,lipid transporter activity; GO:0140303,intramembrane lipid transporter activity; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0006810,transport; GO:0006869,lipid transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0010876,lipid localization; GO:0015748,organophosphate ester transport; GO:0015914,phospholipid transport; GO:0016043,cellular component organization; GO:0033036,macromolecule localization; GO:0034204,lipid translocation; GO:0051179,localization; GO:0051234,establishment of localization; GO:0061024,membrane organization; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0071702,organic substance transport; GO:0071840,cellular component organization or biogenesis; GO:0097035,regulation of membrane lipid distribution; GO:0008104,protein localization; GO:0009914,hormone transport; GO:0009926,auxin polar transport; GO:0010817,regulation of hormone levels; GO:0051641,cellular localization; GO:0060918,auxin transport; GO:0070727,cellular macromolecule localization; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF16212.8:Phospholipid-translocating P-type ATPase C-terminal","--","--","--"]
["MS04G05360",11.411,13.6776,13.8254,5.2132,4.0719,7.9185,2.8281,2.3053,3.5897,9.3228,16.6818,14.1085,9.3948,11.8772,9.7861,760,908,902,254,237,443,143,109,216,504,951,951,491,619,511,0.221901141,0.293366851,0.389403217,false,-0.032675671,0.832969506,0.870763416,false,-0.97488346,"6.17195E-05",0.000181389,false,-1.874145346,"4.44439E-22","6.91891E-21","down",-2.085952058,"2.93296E-16","1.09049E-14","down",-1.825473639,"1.13611E-18","1.78634E-16","down",-0.901164919,0.001328173,0.066957406,false,-1.182382629,"3.40362E-05",0.000358377,"down",-0.917975796,0.000189283,0.003605879,false,"chr_004",4439024,4444508,"+","MS04G05360","--","K20027 palmitoyltransferase ZDHHC1/11 [EC:2.3.1.225] | (RefSeq) probable protein S-acyltransferase 22 (A)","--","probable protein S-acyltransferase 22 [Malus domestica]","ZDHC1_ARATH RecName: Full=Probable protein S-acyltransferase 22; EC=2.3.1.225; AltName: Full=Probable palmitoyltransferase At1g69420; AltName: Full=Zinc finger DHHC domain-containing protein At1g69420;","A0A498IBK8_MALDO RecName: Full=S-acyltransferase {ECO:0000256|RuleBase:RU079119}; EC=2.3.1.225 {ECO:0000256|RuleBase:RU079119}; AltName: Full=Palmitoyltransferase {ECO:0000256|RuleBase:RU079119};","DHHC-type Zn-finger proteins","GO:0030659,cytoplasmic vesicle membrane; GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0019706,protein-cysteine S-palmitoyltransferase activity; GO:0018230,peptidyl-L-cysteine S-palmitoylation; GO:0006612,protein targeting to membrane; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016409,palmitoyltransferase activity; GO:0016417,S-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0019707,protein-cysteine S-acyltransferase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006497,protein lipidation; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0018193,peptidyl-amino acid modification; GO:0018198,peptidyl-cysteine modification; GO:0018231,peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine; GO:0018345,protein palmitoylation; GO:0019538,protein metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0036211,protein modification process; GO:0042157,lipoprotein metabolic process; GO:0042158,lipoprotein biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043543,protein acylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006605,protein targeting; GO:0006810,transport; GO:0006886,intracellular protein transport; GO:0008104,protein localization; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0051668,localization within membrane; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0072657,protein localization to membrane; GO:0090150,establishment of protein localization to membrane; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012506,vesicle membrane; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity; GO:0012505,endomembrane system; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery","PF01529.23:DHHC palmitoyltransferase","--","--","--"]
["MS04G05960",1.567,1.754,1.1766,0.7612,0.4742,0.6167,0.29,0.4013,0.4157,1.1168,1.4373,1.1132,0.5446,0.7944,0.9415,121,135,89,43,32,40,17,22,29,70,95,87,33,48,57,-0.115292547,0.660147481,0.740487472,false,-0.694331657,0.023428501,0.040713516,false,-1.077415743,0.00076361,0.001833082,"down",-1.744132368,"2.47061E-07","1.01269E-06","down",-1.614996665,"8.4561E-07","7.94851E-06","down",-1.03312045,0.007236848,0.03292754,"down",-0.66674845,0.088922486,0.507686641,false,-0.9468932,0.002308129,0.012398073,false,-0.358462444,0.318955571,0.610342458,false,"chr_004",4992663,4997290,"+","MS04G05960","--","K24810 inhibitor of Bruton tyrosine kinase | (RefSeq) uncharacterized protein LOC103453886 (A)","--","PH, RCC1 and FYVE domains-containing protein 1-like isoform X2 [Malus domestica]","PRAF1_ARATH RecName: Full=PH, RCC1 and FYVE domains-containing protein 1 {ECO:0000303|PubMed:11563980}; AltName: Full=Protein Praf4 {ECO:0000303|PubMed:15358268};","A0A540M0N8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD92293.1};","--","GO:0005085,guanyl-nucleotide exchange factor activity; GO:0046872,metal ion binding; GO:0070300,phosphatidic acid binding; GO:0035091,phosphatidylinositol binding; GO:0003674,molecular_function; GO:0030234,enzyme regulator activity; GO:0030695,GTPase regulator activity; GO:0060589,nucleoside-triphosphatase regulator activity; GO:0098772,molecular function regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0005543,phospholipid binding; GO:0008289,lipid binding; GO:0043168,anion binding","PF00415.21:Regulator of chromosome condensation (RCC1) repeat","--","--","--"]
["MS04G06710",2.043,2.3965,2.246,0.9023,1.061,0.5613,0.8487,1.7045,0.8349,1.4134,0.6426,0.5435,1.0414,0.8435,1.343,130,152,140,42,59,30,41,77,48,73,35,35,52,42,67,-1.166543758,0.002849225,0.007208068,"down",-0.758161132,0.003191663,0.006790962,false,-1.179813226,0.000200451,0.000537363,"down",-0.696983619,0.04040984,0.066522396,false,0.484261709,0.336957666,0.489346599,false,0.077788098,0.842888434,0.914536429,false,0.481122814,0.282865635,0.72963778,false,0.004759827,0.992458713,0.995932038,false,-0.393676702,0.302407963,0.594921026,false,"chr_004",5712053,5714894,"-","MS04G06710","--","--","--","hypothetical protein DVH24_040787 [Malus domestica]","FH4_ARATH RecName: Full=Formin-like protein 4; Short=AtFH4; Short=AtFORMIN-4; Flags: Precursor;","A0A498I915_MALDO RecName: Full=Formin-like protein {ECO:0000256|RuleBase:RU361260};","Rho GTPase effector BNI1 and related formins","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0051015,actin filament binding; GO:0045010,actin nucleation; GO:0003674,molecular_function; GO:0003779,actin binding; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0044877,protein-containing complex binding; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0007015,actin filament organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0030029,actin filament-based process; GO:0030036,actin cytoskeleton organization; GO:0071840,cellular component organization or biogenesis; GO:0097435,supramolecular fiber organization; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF02181.26:Formin Homology 2 Domain","--","--","--"]
["MS04G07210",17.5186,13.4414,11.6244,43.9219,89.8683,37.9907,71.4282,91.136,63.9676,91.2603,73.3319,71.6187,110.1287,62.3804,95.1428,880,673,572,1614,3945,1603,2724,3250,2903,3721,3153,3641,4341,2452,3747,2.661151067,"5.92123E-35","3.94095E-33","up",2.944250629,"8.89317E-32","2.88657E-30","up",2.242846003,"4.79462E-10","3.01865E-09","up",2.696804172,"4.822E-31","1.28084E-29","up",0.048762632,0.821612239,0.888890816,false,-0.232630688,0.358383122,0.555075623,false,0.446427178,0.218827396,0.676052191,false,-0.396972572,0.260623338,0.44557424,false,-0.671513041,0.069639622,0.261271122,false,"chr_004",6290900,6295955,"+","MS04G07210","--","K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] | (RefSeq) aldehyde dehydrogenase family 2 member B7, mitochondrial-like (A)","ko00010: Glycolysis / Gluconeogenesis; ko00053: Ascorbate and aldarate metabolism; ko00071: Fatty acid degradation; ko00280: Valine, leucine and isoleucine degradation; ko00310: Lysine degradation; ko00330: Arginine and proline metabolism; ko00340: Histidine metabolism; ko00380: Tryptophan metabolism; ko00410: beta-Alanine metabolism; ko00561: Glycerolipid metabolism; ko00620: Pyruvate metabolism; ko00770: Pantothenate and CoA biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01240: Biosynthesis of cofactors","aldehyde dehydrogenase family 2 member B7, mitochondrial-like isoform X9 [Malus sylvestris]","AL2B7_ARATH RecName: Full=Aldehyde dehydrogenase family 2 member B7, mitochondrial; Short=ALDH2b; EC=1.2.1.3; Flags: Precursor;","A0A540L4G5_MALBA RecName: Full=Aldedh domain-containing protein {ECO:0000259|Pfam:PF00171};","Aldehyde dehydrogenase","GO:0005759,mitochondrial matrix; GO:0005634,nucleus; GO:0004029,aldehyde dehydrogenase (NAD+) activity; GO:0043878,glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004030,aldehyde dehydrogenase [NAD(P)+] activity; GO:0016491,oxidoreductase activity; GO:0016620,oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; GO:0016903,oxidoreductase activity, acting on the aldehyde or oxo group of donors; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0031974,membrane-enclosed lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity","PF00171.25:Aldehyde dehydrogenase family","--","--","--"]
["MS04G07650",1.2964,1.4864,0.7563,0.1125,0.0235,0,0,0.087,0.0228,0.2028,0.1683,0.183,0.1049,0.1052,0.105,63,72,36,4,1,0,0,3,1,8,7,9,4,4,4,-2.49496693,"5.12241E-07","2.78565E-06","down",-3.203122146,"5.18905E-08","2.42111E-07","down",-4.570356711,"2.94313E-08","1.44828E-07","down",-4.799326897,"3.04549E-08","1.40601E-07","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_004",6603498,6606235,"+","MS04G07650","--","K23877 xyloglucan O-acetyltransferase | (RefSeq) protein ALTERED XYLOGLUCAN 4 (A)","--","protein trichome birefringence-like 2 [Malus domestica]","TBL2_ARATH RecName: Full=Protein trichome birefringence-like 2;","A0A498ICC7_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0005794,Golgi apparatus; GO:0016021,integral component of membrane; GO:0016413,O-acetyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008374,O-acyltransferase activity; GO:0016407,acetyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane","PF13839.9:GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p","--","--","--"]
["MS04G08620",17.0696,17.8557,21.5587,6.7293,4.1999,7.2477,6.0238,4.4724,7.6413,6.5313,8.5418,7.5695,7.6098,6.9239,5.3501,586,611,725,169,126,209,157,109,237,182,251,263,205,186,144,-1.133021351,"4.86116E-12","5.28522E-11","down",-1.209058775,"4.40998E-10","2.6725E-09","down",-1.428988936,"4.35323E-10","2.7524E-09","down",-1.355751501,"2.65601E-10","1.58001E-09","down",-0.210058566,0.373024851,0.526542631,false,-0.13152582,0.61072087,0.766507187,false,0.071737142,0.799417288,0.952301688,false,-0.280180964,0.250854964,0.433891047,false,-0.19555435,0.458937476,0.728569814,false,"chr_004",7651356,7653541,"+","MS04G08620","--","K25840 E3 ubiquitin-protein ligase AIRP2 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase AIRP2-like isoform X1 (A)","--","E3 ubiquitin-protein ligase AIRP2-like [Malus sylvestris]","AIRP2_ARATH RecName: Full=E3 ubiquitin-protein ligase AIRP2 {ECO:0000305}; EC=2.3.2.27 {ECO:0000269|PubMed:21969385}; AltName: Full=Protein ABA INSENSITIVE RING PROTEIN 2 {ECO:0000303|PubMed:21969385}; Short=AtAIRP2 {ECO:0000303|PubMed:21969385}; AltName: Full=RING-type E3 ubiquitin transferase AIRP2 {ECO:0000305};","A0A498ICL7_MALDO RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};","Predicted E3 ubiquitin ligase","GO:0005829,cytosol; GO:0046872,metal ion binding; GO:0061630,ubiquitin protein ligase activity; GO:0004842,ubiquitin-protein transferase activity; GO:0009789,positive regulation of abscisic acid-activated signaling pathway; GO:0016567,protein ubiquitination; GO:0009737,response to abscisic acid; GO:0009651,response to salt stress; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0061659,ubiquitin-like protein ligase activity; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009738,abscisic acid-activated signaling pathway; GO:0009755,hormone-mediated signaling pathway; GO:0009787,regulation of abscisic acid-activated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009967,positive regulation of signal transduction; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0010647,positive regulation of cell communication; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0023056,positive regulation of signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901419,regulation of response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:1905957,regulation of cellular response to alcohol; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0009628,response to abiotic stimulus; GO:0006508,proteolysis; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF13920.9:Zinc finger, C3HC4 type (RING finger)","--","--","--"]
["MS04G09550",2.2629,2.1532,1.5718,0.6059,0.614,0.7776,0.5531,0.5586,0.8779,0.776,0.8994,0.6915,0.327,0.6559,0.7141,97,92,66,19,23,28,18,17,34,27,33,30,11,22,24,-1.161192908,0.000284832,0.000920401,"down",-1.534739805,"5.54227E-05",0.000164275,"down",-1.37392044,"6.35657E-05",0.000186392,"down",-1.305911212,0.00026988,0.000691802,"down",-0.133358669,0.744768864,0.836201753,false,0.241932057,0.617084842,0.770708527,false,0.066783471,0.875719768,0.971434613,false,-0.197528941,0.617101576,0.770413512,false,0.18456767,0.69192811,0.871568432,false,"chr_004",8604171,8608743,"-","MS04G09550","--","K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) uncharacterized protein LOC103413440 isoform X1 (A)","ko04075: Plant hormone signal transduction","hypothetical protein DVH24_041056 [Malus domestica]","SPL2_ARATH RecName: Full=Squamosa promoter-binding-like protein 2;","A0A498IAE7_MALDO RecName: Full=SBP-type domain-containing protein {ECO:0000259|PROSITE:PS51141};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0000976,transcription cis-regulatory region binding; GO:0048653,anther development; GO:0090356,negative regulation of auxin metabolic process; GO:0048510,regulation of timing of transition from vegetative to reproductive phase; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048437,floral organ development; GO:0048438,floral whorl development; GO:0048443,stamen development; GO:0048466,androecium development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0099402,plant organ development; GO:0008152,metabolic process; GO:0009850,auxin metabolic process; GO:0009892,negative regulation of metabolic process; GO:0009987,cellular process; GO:0010817,regulation of hormone levels; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0032350,regulation of hormone metabolic process; GO:0032351,negative regulation of hormone metabolic process; GO:0042445,hormone metabolic process; GO:0044237,cellular metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0090354,regulation of auxin metabolic process; GO:0009888,tissue development; GO:0040034,regulation of development, heterochronic; GO:0048506,regulation of timing of meristematic phase transition; GO:0048507,meristem development; GO:0048509,regulation of meristem development; GO:0050793,regulation of developmental process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03110.17:SBP domain","SBP","TF","SBP"]
["MS04G10230",5.9774,4.982,5.1632,0.1257,0.3157,0.5474,0.2423,0.3886,0.1018,3.5121,5.5867,3.5437,1.9922,2.4679,1.8767,65,54,55,1,3,5,2,3,1,31,52,39,17,21,16,-0.173612065,0.588788222,0.679022821,false,-1.056405673,0.00328479,0.00696753,"down",-3.787700018,"7.19853E-10","4.41638E-09","down",-4.236854206,"1.44086E-09","7.8372E-09","down",-4.046854344,"5.07749E-08","6.11149E-07","down","NA","NA","NA","NA","NA","NA","NA","NA",-3.603414704,"7.08936E-08","1.55341E-06","down","NA","NA","NA","NA","chr_004",9536801,9537925,"+","MS04G10230","--","K16297 serine carboxypeptidase-like clade II [EC:3.4.16.-] | (RefSeq) LOW QUALITY PROTEIN: serine carboxypeptidase-like 45 (A)","--","hypothetical protein C1H46_042039 [Malus baccata]","SCP45_ARATH RecName: Full=Serine carboxypeptidase-like 45; EC=3.4.16.-; Flags: Precursor;","A0A540KE70_MALBA RecName: Full=Carboxypeptidase {ECO:0000256|RuleBase:RU361156}; EC=3.4.16.- {ECO:0000256|RuleBase:RU361156};","Serine carboxypeptidases (lysosomal cathepsin A)","GO:0005576,extracellular region; GO:0009505,plant-type cell wall; GO:0009506,plasmodesma; GO:0004185,serine-type carboxypeptidase activity; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004180,carboxypeptidase activity; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0008238,exopeptidase activity; GO:0016787,hydrolase activity; GO:0017171,serine hydrolase activity; GO:0070008,serine-type exopeptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0005618,cell wall; GO:0030312,external encapsulating structure; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF00450.25:Serine carboxypeptidase","--","--","--"]
["MS04G10980",7.024,8.8406,6.0405,4.7135,3.2151,4.3077,3.2522,3.2081,5.2067,3.6712,4.7993,2.9233,2.7125,3.0193,2.3619,330,414,278,162,132,170,116,107,221,140,193,139,100,111,87,-0.764235888,0.002371987,0.006116457,false,-1.146293241,"5.16104E-07","2.09657E-06","down",-0.633932103,0.009256278,0.01777382,false,-0.634329704,0.014384747,0.026413172,false,0.142549705,0.620536544,0.744101777,false,0.530329344,0.045498839,0.134116891,false,0.001286856,0.996195369,0.998872295,false,0.144998652,0.588992718,0.750677949,false,0.536711183,0.02362192,0.12996276,false,"chr_004",10332661,10335995,"-","MS04G10980","--","K08245 phytepsin [EC:3.4.23.40] | (RefSeq) aspartic proteinase-like (A)","--","aspartic proteinase-like [Malus domestica]","ASPR1_ORYSJ RecName: Full=Aspartic proteinase oryzasin-1; EC=3.4.23.-; Flags: Precursor;","A0A540K8Y1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD70686.1};","Aspartyl protease","GO:0005773,vacuole; GO:0004190,aspartic-type endopeptidase activity; GO:0006629,lipid metabolic process; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00026.26:Eukaryotic aspartyl protease","--","--","--"]
["MS04G11690",33.9172,27.5428,31.8748,10.2371,11.8702,9.8256,9.1776,12.9475,11.9818,13.3362,13.4588,12.6874,13.8836,11.8131,14.6271,1952,1580,1797,431,597,475,401,529,623,623,663,739,627,532,660,-1.054119855,"4.67415E-14","6.31865E-13","down",-0.918023623,"3.25889E-09","1.77238E-08",false,-1.327696824,"5.24941E-14","5.12316E-13","down",-1.169908145,"1.57279E-10","9.57446E-10","down",-0.102841582,0.570661527,0.704144296,false,-0.236046606,0.217605214,0.403226803,false,0.155680984,0.469091904,0.841399657,false,-0.255803718,0.142842024,0.295672782,false,-0.383378598,0.040786088,0.18608529,false,"chr_004",11441005,11445391,"-","MS04G11690","--","K03377 N-acetylneuraminate 9-O-acetyltransferase [EC:2.3.1.45] | (RefSeq) protein REDUCED WALL ACETYLATION 2-like isoform X1 (A)","--","protein REDUCED WALL ACETYLATION 2-like isoform X1 [Malus domestica]","RWA2_ARATH RecName: Full=Protein REDUCED WALL ACETYLATION 2 {ECO:0000303|PubMed:21212300, ECO:0000303|PubMed:21673009}; EC=2.3.1.- {ECO:0000305};","A0A540MVF1_MALBA RecName: Full=Cas1_AcylT domain-containing protein {ECO:0000259|Pfam:PF07779};","O-acetyltransferase","GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0000138,Golgi trans cisterna; GO:0016021,integral component of membrane; GO:0016407,acetyltransferase activity; GO:0016491,oxidoreductase activity; GO:0005975,carbohydrate metabolic process; GO:0050832,defense response to fungus; GO:0009834,plant-type secondary cell wall biogenesis; GO:0005976,polysaccharide metabolic process; GO:1990937,xylan acetylation; GO:0045492,xylan biosynthetic process; GO:0045491,xylan metabolic process; GO:0010411,xyloglucan metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0009832,plant-type cell wall biogenesis; GO:0009987,cellular process; GO:0042546,cell wall biogenesis; GO:0044085,cellular component biogenesis; GO:0071554,cell wall organization or biogenesis; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0043170,macromolecule metabolic process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010410,hemicellulose metabolic process; GO:0043412,macromolecule modification; GO:0044036,cell wall macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0000271,polysaccharide biosynthetic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0044038,cell wall macromolecule biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0070589,cellular component macromolecule biosynthetic process; GO:0070592,cell wall polysaccharide biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006073,cellular glucan metabolic process; GO:0044042,glucan metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment; GO:0098588,bounding membrane of organelle; GO:0005795,Golgi stack; GO:0031985,Golgi cisterna; GO:0098791,Golgi apparatus subcompartment; GO:0031224,intrinsic component of membrane","PF07779.15:10 TM Acyl Transferase domain found in Cas1p","--","--","--"]
["MS04G12030",1.6629,1.9663,3.6983,0.6495,0.4078,0.2121,0.4694,0.5019,0.7889,0.2195,0.6939,0.5281,0.3027,0.4554,0.4545,28,33,61,8,6,3,6,6,12,3,10,9,4,6,6,-2.152098608,0.000207538,0.00069299,"down",-2.296016305,"9.21551E-05",0.000262968,"down",-2.317000635,0.000206764,0.000552446,"down",-1.757935911,0.001467106,0.003315841,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_004",11773800,11776036,"-","MS04G12030","--","--","--","FIP1[V]","--","A0A498I9M5_MALDO RecName: Full=Fip1 domain-containing protein {ECO:0000259|Pfam:PF05182};","--","GO:0005634,nucleus; GO:0006397,mRNA processing; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016071,mRNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS04G12860",6.6585,6.4399,8.5577,13.7512,16.4081,13.5727,14.6174,16.9141,14.2806,12.3736,11.4914,12.7795,12.1278,10.4681,14.0936,417,402,525,630,898,714,695,752,808,629,616,810,596,513,692,0.950309423,"7.92082E-09","5.68817E-08",false,1.055820968,"5.08604E-09","2.70288E-08","up",1.236544903,"1.36642E-10","9.18533E-10","up",1.369893935,"1.76046E-14","1.58086E-13","up",0.431716107,0.006931253,0.022737876,false,0.328644091,0.066865087,0.177101604,false,0.129426438,0.502635968,0.856073712,false,0.30493599,0.086905414,0.208577504,false,0.207263332,0.293008632,0.585679185,false,"chr_004",12696932,12702279,"+","MS04G12860","--","K00249 acyl-CoA dehydrogenase [EC:1.3.8.7] | (RefSeq) probable acyl-CoA dehydrogenase IBR3 (A)","ko00071: Fatty acid degradation; ko00280: Valine, leucine and isoleucine degradation; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01212: Fatty acid metabolism","probable acyl-CoA dehydrogenase IBR3 [Malus domestica]","IBR3_ARATH RecName: Full=Probable acyl-CoA dehydrogenase IBR3 {ECO:0000305}; EC=1.3.99.- {ECO:0000305}; AltName: Full=Protein INDOLE-3-BUTYRIC ACID RESPONSE 3 {ECO:0000303|PubMed:17277896};","A0A498IDJ8_MALDO RecName: Full=Sucrose synthase {ECO:0000256|ARBA:ARBA00012540, ECO:0000256|RuleBase:RU280817}; EC=2.4.1.13 {ECO:0000256|ARBA:ARBA00012540, ECO:0000256|RuleBase:RU280817}; Flags: Fragment;","Predicted acyl-CoA dehydrogenase","GO:0005737,cytoplasm; GO:0005777,peroxisome; GO:0003995,acyl-CoA dehydrogenase activity; GO:0050660,flavin adenine dinucleotide binding; GO:0033539,fatty acid beta-oxidation using acyl-CoA dehydrogenase; GO:0048767,root hair elongation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0052890,oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006635,fatty acid beta-oxidation; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009062,fatty acid catabolic process; GO:0009987,cellular process; GO:0016042,lipid catabolic process; GO:0016054,organic acid catabolic process; GO:0019395,fatty acid oxidation; GO:0019752,carboxylic acid metabolic process; GO:0030258,lipid modification; GO:0032787,monocarboxylic acid metabolic process; GO:0034440,lipid oxidation; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044242,cellular lipid catabolic process; GO:0044248,cellular catabolic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044282,small molecule catabolic process; GO:0046395,carboxylic acid catabolic process; GO:0071704,organic substance metabolic process; GO:0072329,monocarboxylic acid catabolic process; GO:1901575,organic substance catabolic process; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0010015,root morphogenesis; GO:0010053,root epidermal cell differentiation; GO:0010054,trichoblast differentiation; GO:0016049,cell growth; GO:0021700,developmental maturation; GO:0022622,root system development; GO:0030154,cell differentiation; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0040007,growth; GO:0048364,root development; GO:0048468,cell development; GO:0048469,cell maturation; GO:0048588,developmental cell growth; GO:0048589,developmental growth; GO:0048731,system development; GO:0048764,trichoblast maturation; GO:0048765,root hair cell differentiation; GO:0048856,anatomical structure development; GO:0048869,cellular developmental process; GO:0060560,developmental growth involved in morphogenesis; GO:0071695,anatomical structure maturation; GO:0080147,root hair cell development; GO:0090558,plant epidermis development; GO:0090627,plant epidermal cell differentiation; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0042579,microbody; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01636.26:Phosphotransferase enzyme family","--","--","--"]
["MS04G14110",0.7265,1.666,2.1191,3.2632,3.2067,3.089,2.8709,2.0468,3.3316,3.836,1.9401,3.6919,2.3808,5.0402,2.6476,7,16,20,23,27,25,21,14,29,30,16,36,18,38,20,1.273161815,0.020935343,0.041742145,"up",1.454349691,0.007563304,0.014786691,"up",1.305411909,0.010388697,0.019715689,"up",1.160953458,0.030727443,0.052171066,false,-0.095500541,0.83962345,0.901341783,false,-0.27677772,0.56002108,0.730392278,false,-0.143105073,0.732166618,0.932800917,false,0.052933786,0.905971361,0.950801588,false,-0.123263884,0.783492713,0.9161682,false,"chr_004",14552105,14552620,"-","MS04G14110","--","K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] | (RefSeq) peptide methionine sulfoxide reductase B5-like (A)","--","hypothetical protein C1H46_014662 [Malus baccata]","MSRB5_ORYSJ RecName: Full=Peptide methionine sulfoxide reductase B5; Short=OsMSRB5; EC=1.8.4.12; AltName: Full=Peptide-methionine (R)-S-oxide reductase;","A0A540MLR2_MALBA RecName: Full=MsrB domain-containing protein {ECO:0000259|PROSITE:PS51790};","Predicted pilin-like transcription factor","GO:0005829,cytosol; GO:0046872,metal ion binding; GO:0033743,peptide-methionine (R)-S-oxide reductase activity; GO:0030091,protein repair; GO:0006979,response to oxidative stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016667,oxidoreductase activity, acting on a sulfur group of donors; GO:0016671,oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF01641.21:SelR domain","--","--","--"]
["MS04G15290",5.6826,9.4068,7.1788,1.3594,1.9508,3.5517,1.0292,1.801,1.3366,3.4129,3.9833,3.2987,2.3535,3.8125,4.4394,80,132,99,14,24,42,11,18,17,39,48,47,26,42,49,-0.874686705,0.003540466,0.008753708,false,-0.781511974,0.019644349,0.034802971,false,-1.488724556,0.000257264,0.000675201,"down",-2.142176781,"3.49386E-08","1.60059E-07","down",-1.254479696,0.00207376,0.008131864,"down",-1.3426118,0.002684243,0.014897923,"down",-0.646964544,0.221307321,0.678613443,false,-0.599014171,0.16290506,0.32422253,false,-0.683285265,0.137338018,0.388799425,false,"chr_004",16458091,16458692,"-","MS04G15290","--","--","--","preprotein translocase subunit SECE1 [Malus sylvestris]","SECE1_ARATH RecName: Full=Preprotein translocase subunit SECE1; Flags: Precursor;","A0A540L8H7_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD82760.1};","--","GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0008320,protein transmembrane transporter activity; GO:0009306,protein secretion; GO:0006605,protein targeting; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0022857,transmembrane transporter activity; GO:0022884,macromolecule transmembrane transporter activity; GO:0140318,protein transporter activity; GO:0006810,transport; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015031,protein transport; GO:0032940,secretion by cell; GO:0033036,macromolecule localization; GO:0035592,establishment of protein localization to extracellular region; GO:0045184,establishment of protein localization; GO:0046903,secretion; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0071692,protein localization to extracellular region; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0140352,export from cell; GO:0006886,intracellular protein transport; GO:0046907,intracellular transport; GO:0051649,establishment of localization in cell; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF00584.23:SecE/Sec61-gamma subunits of protein translocation complex","--","--","--"]
["MS04G15900",3.118,1.8833,2.9232,1.1308,0.4733,1.1363,1.1315,1.6134,0.7043,1.6463,1.8585,1.6347,1.0542,0.6099,1.8262,98,59,90,26,13,30,27,36,20,42,50,52,26,15,45,-0.439445419,0.149026229,0.222992258,false,-0.891493183,0.035256956,0.058517909,false,-1.334051354,0.001445759,0.003289394,"down",-0.9177888,0.024663154,0.042910482,false,-0.468879803,0.250899692,0.395420365,false,-0.007560854,0.988506382,0.994688816,false,0.420008383,0.418949243,0.814700241,false,-0.880289825,0.034686506,0.104872281,false,-0.419051853,0.441222857,0.715997723,false,"chr_004",17540991,17543311,"-","MS04G15900","--","K05275 pyridoxine 4-dehydrogenase [EC:1.1.1.65] | (RefSeq) pyridoxal reductase, chloroplastic isoform X1 (A)","ko00750: Vitamin B6 metabolism; ko01100: Metabolic pathways","hypothetical protein C1H46_029793 [Malus baccata]","PERR_RAUSE RecName: Full=Perakine reductase; EC=1.1.1.317;","A0A540LDV3_MALBA RecName: Full=Aldo_ket_red domain-containing protein {ECO:0000259|Pfam:PF00248};","Voltage-gated shaker-like K+ channel, subunit beta/KCNAB","GO:0016491,oxidoreductase activity; GO:0009820,alkaloid metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF00248.24:Aldo/keto reductase family","--","--","--"]
["MS04G16640",3.6347,3.432,4.2561,8.8168,6.6058,7.8906,6.4304,7.981,6.863,5.8827,5.079,6.6546,5.4948,5.1459,5.4541,102,96,117,181,162,186,137,159,174,134,122,189,121,113,120,0.829810883,0.000188605,0.000636095,false,0.801895128,0.000114555,0.000320903,false,1.25445177,"7.21973E-09","3.88031E-08","up",1.194638061,"3.8888E-08","1.76953E-07","up",0.378456759,0.088035503,0.178924029,false,0.407580436,0.050017338,0.143745955,false,-0.060781229,0.778155599,0.946516884,false,0.442817768,0.046168481,0.130134511,false,0.477173982,0.020386547,0.117850052,false,"chr_004",19010776,19017244,"+","MS04G16640","--","--","--","filament-like plant protein 7 isoform X2 [Malus domestica]","FPP4_ARATH RecName: Full=Filament-like plant protein 4; Short=AtFPP4;","A0A498JWU5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH99860.1};","--","GO:0008017,microtubule binding; GO:0046785,microtubule polymerization; GO:0010090,trichome morphogenesis; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0015631,tubulin binding; GO:0000226,microtubule cytoskeleton organization; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0007017,microtubule-based process; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0031109,microtubule polymerization or depolymerization; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0051258,protein polymerization; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0097435,supramolecular fiber organization; GO:0000902,cell morphogenesis; GO:0000904,cell morphogenesis involved in differentiation; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0010026,trichome differentiation; GO:0030154,cell differentiation; GO:0032502,developmental process; GO:0048468,cell development; GO:0048856,anatomical structure development; GO:0048869,cellular developmental process; GO:0090558,plant epidermis development; GO:0090626,plant epidermis morphogenesis","PF05911.14:Filament-like plant protein, long coiled-coil","--","--","--"]
["MS04G17730",16.7706,17.2622,22.901,6.0538,7.0615,7.3465,6.1201,6.1359,7.393,6.6187,9.5844,7.6038,4.4409,6.8656,6.1116,231,237,309,61,85,85,64,60,92,74,113,106,48,74,66,-1.072937676,"1.4676E-06","7.39581E-06","down",-1.415473366,"4.5728E-09","2.44288E-08","down",-1.256356187,"3.97264E-08","1.91471E-07","down",-1.24781783,"3.02021E-08","1.39542E-07","down",-0.163217425,0.520541938,0.662448559,false,0.182481935,0.5132409,0.692554877,false,0.006102169,0.98088116,0.994001869,false,-0.167214298,0.519224813,0.697885333,false,0.184468788,0.510863461,0.76558548,false,"chr_004",21164270,21164858,"+","MS04G17730","--","K17769 mitochondrial import receptor subunit TOM22 | (RefSeq) mitochondrial import receptor subunit TOM9-2-like (A)","--","mitochondrial import receptor subunit TOM9-2-like [Pyrus x bretschneideri]","TOM92_ARATH RecName: Full=Mitochondrial import receptor subunit TOM9-2; AltName: Full=Mitochondrial import receptor subunit TOM22 homolog 2; AltName: Full=Translocase of outer membrane 22 kDa subunit homolog 2; AltName: Full=Translocase of outer membrane 9 kDa subunit TOM9-2;","A0A540NG33_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE09573.1};","Translocase of outer mitochondrial membrane complex, subunit TOM22","GO:0016021,integral component of membrane; GO:0005742,mitochondrial outer membrane translocase complex; GO:0005739,mitochondrion; GO:0000325,plant-type vacuole; GO:0009536,plastid; GO:0015450,protein-transporting ATPase activity; GO:0006626,protein targeting to mitochondrion; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0008320,protein transmembrane transporter activity; GO:0015399,primary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0022884,macromolecule transmembrane transporter activity; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0140318,protein transporter activity; GO:0140657,ATP-dependent activity; GO:0006605,protein targeting; GO:0006810,transport; GO:0006839,mitochondrial transport; GO:0006886,intracellular protein transport; GO:0006996,organelle organization; GO:0007005,mitochondrion organization; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015031,protein transport; GO:0016043,cellular component organization; GO:0033036,macromolecule localization; GO:0033365,protein localization to organelle; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070585,protein localization to mitochondrion; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0071840,cellular component organization or biogenesis; GO:0072594,establishment of protein localization to organelle; GO:0072655,establishment of protein localization to mitochondrion; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005740,mitochondrial envelope; GO:0005741,mitochondrial outer membrane; GO:0019867,outer membrane; GO:0031090,organelle membrane; GO:0031966,mitochondrial membrane; GO:0031967,organelle envelope; GO:0031968,organelle outer membrane; GO:0031975,envelope; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0098796,membrane protein complex; GO:0098798,mitochondrial protein-containing complex; GO:0098799,outer mitochondrial membrane protein complex; GO:0005773,vacuole","PF04281.16:Mitochondrial import receptor subunit Tom22","--","--","--"]
["MS04G19120",93.9273,133.265,87.376,69.5636,40.6887,35.8164,66.9385,64.5595,90.7777,50.5479,30.0502,47.8863,40.2228,70.1375,53.923,4068,5753,3707,2204,1540,1303,2201,1985,3552,1777,1114,2099,1367,2377,1831,-1.09752132,"3.56129E-05",0.000138619,"down",-0.651153068,0.006423839,0.012767709,false,-0.889679069,0.003311825,0.007008599,false,-0.227379672,0.295310502,0.373500869,false,0.887023312,0.000399002,0.001953138,false,0.440555503,0.053596594,0.151221304,false,0.66379694,0.020405676,0.281072384,false,0.227398037,0.480086066,0.663664838,false,-0.215047071,0.479818992,0.743327902,false,"chr_004",23928327,23930711,"-","MS04G19120","--","K14504 xyloglucan:xyloglucosyl transferase TCH4 [EC:2.4.1.207] | (RefSeq) XET02; probable xyloglucan endotransglucosylase/hydrolase protein 23 precursor (A)","ko04075: Plant hormone signal transduction","probable xyloglucan endotransglucosylase/hydrolase protein 23 [Malus sylvestris]","XTH23_ARATH RecName: Full=Probable xyloglucan endotransglucosylase/hydrolase protein 23; Short=At-XTH23; Short=XTH-23; EC=2.4.1.207; Flags: Precursor;","A0A498I928_MALDO RecName: Full=Xyloglucan endotransglucosylase/hydrolase {ECO:0000256|RuleBase:RU361120}; EC=2.4.1.207 {ECO:0000256|RuleBase:RU361120};","--","GO:0048046,apoplast; GO:0005794,Golgi apparatus; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0030247,polysaccharide binding; GO:0016762,xyloglucan:xyloglucosyl transferase activity; GO:0042546,cell wall biogenesis; GO:0071555,cell wall organization; GO:0010411,xyloglucan metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0005488,binding; GO:0030246,carbohydrate binding; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0044085,cellular component biogenesis; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008152,metabolic process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010410,hemicellulose metabolic process; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0071704,organic substance metabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00722.24:Glycosyl hydrolases family 16","--","--","--"]
["MS04G21140",3.4851,3.4964,8.8661,17.2412,10.7613,11.5907,8.088,10.4416,19.5938,12.131,14.606,19.0759,12.5483,15.7648,17.2162,63,63,157,228,170,176,111,134,320,178,226,349,178,223,244,1.725716456,"4.17471E-06","1.94892E-05","up",1.82368125,"2.09593E-07","8.97992E-07","up",1.546735284,0.000123963,0.00034534,"up",1.54765421,0.000309964,0.000787954,"up",-0.16263845,0.630827171,0.752310198,false,-0.256026591,0.42259015,0.614844228,false,0.004425267,0.990123398,0.997393345,false,-0.164406787,0.547118357,0.719463047,false,-0.254828185,0.314054167,0.60577268,false,"chr_004",33448122,33448894,"+","MS04G21140","--","--","--","protein GLUTAMINE DUMPER 3 [Malus domestica]","GDU3_ARATH RecName: Full=Protein GLUTAMINE DUMPER 3; AltName: Full=Protein LESS SUSCEPTIBLE TO BSCTV 1; Short=Protein LBS1;","A0A540NSL2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE13955.1};","--","GO:0016021,integral component of membrane; GO:0006865,amino acid transport; GO:0019048,modulation by virus of host process; GO:0080143,regulation of amino acid export; GO:0009615,response to virus; GO:0032940,secretion by cell; GO:0006810,transport; GO:0008150,biological_process; GO:0015849,organic acid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0016032,viral process; GO:0035821,modulation of process of another organism; GO:0044003,modulation by symbiont of host process; GO:0044403,biological process involved in symbiotic interaction; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051701,biological process involved in interaction with host; GO:0003333,amino acid transmembrane transport; GO:0009987,cellular process; GO:0015837,amine transport; GO:0032879,regulation of localization; GO:0032890,regulation of organic acid transport; GO:0032973,amino acid export across plasma membrane; GO:0034762,regulation of transmembrane transport; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051049,regulation of transport; GO:0051952,regulation of amine transport; GO:0051955,regulation of amino acid transport; GO:0055085,transmembrane transport; GO:0065007,biological regulation; GO:0140115,export across plasma membrane; GO:0140352,export from cell; GO:1903789,regulation of amino acid transmembrane transport; GO:1903825,organic acid transmembrane transport; GO:1905039,carboxylic acid transmembrane transport; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0046903,secretion; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS05G00210",267.1222,255.1923,264.661,523.0428,448.1393,575.3103,544.3095,398.2555,476.3551,422.6708,463.8636,467.2812,489.4885,483.5761,504.386,13212,12581,12823,18925,19370,23902,20439,13984,21286,16969,19638,23391,18998,18716,19559,0.968253598,"1.04236E-26","4.06906E-25",false,1.201077989,"8.27746E-37","3.62209E-35","up",1.184917325,"2.83768E-22","5.82516E-21","up",1.133881842,"3.14114E-13","2.51072E-12","up",0.177878216,0.249821028,0.394201539,false,-0.052500061,0.732650989,0.849271178,false,-0.05337686,0.749365639,0.938077142,false,0.233477636,0.050902003,0.140368678,false,0.008655787,0.942624079,0.981910415,false,"chr_005",221884,225707,"-","MS05G00210","--","K20102 YTH domain-containing family protein | (RefSeq) YTP2; YTH domain-containing family protein 2-like (A)","--","YTH domain-containing protein ECT4-like isoform X1 [Malus sylvestris]","ECT2_ARATH RecName: Full=YTH domain-containing protein ECT2 {ECO:0000305}; AltName: Full=Protein EVOLUTIONARILY CONSERVED C-TERMINAL REGION 2 {ECO:0000303|PubMed:16113215};","A0A498IKD6_MALDO RecName: Full=YTH domain-containing protein {ECO:0000259|PROSITE:PS50882};","Uncharacterized high-glucose-regulated protein","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005634,nucleus; GO:0003729,mRNA binding; GO:0061157,mRNA destabilization; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006401,RNA catabolic process; GO:0006402,mRNA catabolic process; GO:0006412,translation; GO:0006417,regulation of translation; GO:0006518,peptide metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0009893,positive regulation of metabolic process; GO:0009894,regulation of catabolic process; GO:0009896,positive regulation of catabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0010608,post-transcriptional regulation of gene expression; GO:0010629,negative regulation of gene expression; GO:0016070,RNA metabolic process; GO:0016071,mRNA metabolic process; GO:0017148,negative regulation of translation; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019439,aromatic compound catabolic process; GO:0019538,protein metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0031329,regulation of cellular catabolic process; GO:0031331,positive regulation of cellular catabolic process; GO:0034248,regulation of cellular amide metabolic process; GO:0034249,negative regulation of cellular amide metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0034655,nucleobase-containing compound catabolic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043487,regulation of RNA stability; GO:0043488,regulation of mRNA stability; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0044270,cellular nitrogen compound catabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0046700,heterocycle catabolic process; GO:0048518,positive regulation of biological process; GO:0048519,negative regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0048523,negative regulation of cellular process; GO:0050779,RNA destabilization; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051248,negative regulation of protein metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0061013,regulation of mRNA catabolic process; GO:0061014,positive regulation of mRNA catabolic process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901575,organic substance catabolic process; GO:1901576,organic substance biosynthetic process; GO:1903311,regulation of mRNA metabolic process; GO:1903313,positive regulation of mRNA metabolic process; GO:2000112,regulation of cellular macromolecule biosynthetic process; GO:2000113,negative regulation of cellular macromolecule biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF04146.18:YT521-B-like domain","--","--","--"]
["MS05G00230",129.7605,123.1779,106.6493,51.4022,37.9413,52.9128,52.5725,51.3774,71.3812,43.3733,56.0859,46.0096,36.5651,37.0451,39.4551,7471,7069,6015,2165,1909,2559,2298,2100,3713,2027,2764,2681,1652,1669,1781,-1.12483579,"6.0226E-14","8.03132E-13","down",-1.379396301,"1.85551E-24","3.82458E-23","down",-1.130892166,"1.37546E-10","9.23987E-10","down",-0.761708471,"9.01885E-06","2.95888E-05",false,0.37661948,0.030027844,0.07607661,false,0.634833015,"6.58447E-05",0.000679643,false,0.370279761,0.050432764,0.403821876,false,0.009316659,0.957125315,0.978461406,false,0.272575745,0.078505133,0.280593848,false,"chr_005",247041,251465,"+","MS05G00230","--","K04077 chaperonin GroEL [EC:5.6.1.7] | (RefSeq) LOW QUALITY PROTEIN: ruBisCO large subunit-binding protein subunit beta, chloroplastic (A)","ko03018: RNA degradation","ruBisCO large subunit-binding protein subunit beta, chloroplastic [Malus sylvestris]","CPNB2_ARATH RecName: Full=Chaperonin 60 subunit beta 2, chloroplastic; Short=CPN-60 beta 2; Flags: Precursor;","A0A540LM64_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD87508.1};","Mitochondrial chaperonin, Cpn60/Hsp60p","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0022626,cytosolic ribosome; GO:0005739,mitochondrion; GO:0005730,nucleolus; GO:0005634,nucleus; GO:0005524,ATP binding; GO:0140662,ATP-dependent protein folding chaperone; GO:0003729,mRNA binding; GO:0051085,chaperone cofactor-dependent protein refolding; GO:0006457,protein folding; GO:0042026,protein refolding; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0044183,protein folding chaperone; GO:0140657,ATP-dependent activity; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0006458,'de novo' protein folding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0051084,'de novo' post-translational protein folding; GO:0061077,chaperone-mediated protein folding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0005829,cytosol; GO:0005840,ribosome; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen","PF00118.27:TCP-1/cpn60 chaperonin family","--","--","--"]
["MS05G01250",6.8029,6.3376,7.2754,61.9963,43.9277,46.7612,40.6432,37.8743,28.8648,50.6858,46.0785,46.3324,34.3681,40.2604,44.2116,84,78,88,560,474,485,381,332,322,508,487,579,333,389,428,2.998874296,"4.21463E-63","1.11202E-60","up",2.832574418,"1.38457E-52","1.13286E-50","up",3.117932584,"3.94652E-45","2.94819E-43","up",2.684239817,"4.77912E-31","1.27059E-29","up",-0.303683251,0.14163862,0.257661648,false,-0.135374385,0.516466823,0.695348175,false,-0.436411047,0.064981053,0.449877144,false,0.135676254,0.496461491,0.678479497,false,0.309496787,0.12721099,0.372488783,false,"chr_005",1918755,1919853,"-","MS05G01250","--","K13459 disease resistance protein RPS2 | (RefSeq) disease resistance protein At4g27190-like (A)","ko04626: Plant-pathogen interaction","disease resistance protein At4g27190-like [Malus sylvestris]","DRL28_ARATH RecName: Full=Probable disease resistance protein At4g27220;","A0A540MM44_MALBA RecName: Full=NB-ARC domain-containing protein {ECO:0000259|Pfam:PF00931};","--","GO:0043531,ADP binding; GO:0005524,ATP binding; GO:0006952,defense response; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus","PF12799.10:Leucine Rich repeats (2 copies)","--","--","--"]
["MS05G01910",23.8847,33.5356,21.0398,8.6283,8.5962,8.6609,8.6653,8.745,9.6434,8.6524,8.6033,8.7548,9.1955,8.1799,8.9013,1612,2256,1391,426,507,491,444,419,588,474,497,598,487,432,471,-1.407976129,"1.56876E-11","1.60799E-10","down",-1.287658564,"5.15494E-10","3.10294E-09","down",-1.387418278,"3.11783E-10","1.99857E-09","down",-1.257763291,"3.91358E-09","2.01678E-08","down",0.164985151,0.212826,0.350100495,false,0.046889439,0.744815959,0.856538853,false,0.128673874,0.368652032,0.790513511,false,0.038711493,0.781884688,0.880558623,false,-0.073728759,0.619589683,0.832287758,false,"chr_005",2951694,2955825,"+","MS05G01910","--","--","--","WEB family protein At5g55860-like [Malus sylvestris]","Y5586_ARATH RecName: Full=WEB family protein At5g55860;","A0A4Y1QC97_MALDO SubName: Full=Predicted WEB family protein At5g55860 {ECO:0000313|EMBL:BBC44093.1};","--","GO:0005829,cytosol; GO:0009536,plastid; GO:0071260,cellular response to mechanical stimulus; GO:0009904,chloroplast accumulation movement; GO:0009903,chloroplast avoidance movement; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009612,response to mechanical stimulus; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071496,cellular response to external stimulus; GO:0104004,cellular response to environmental stimulus; GO:0006996,organelle organization; GO:0009657,plastid organization; GO:0009658,chloroplast organization; GO:0009902,chloroplast relocation; GO:0016043,cellular component organization; GO:0019750,chloroplast localization; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051640,organelle localization; GO:0051641,cellular localization; GO:0051644,plastid localization; GO:0051649,establishment of localization in cell; GO:0051656,establishment of organelle localization; GO:0051667,establishment of plastid localization; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF05701.14:Weak chloroplast movement under blue light","--","--","--"]
["MS05G02830",13.7608,13.1696,8.8438,1.5886,3.778,1.8866,2.4701,5.3574,3.2158,9.0134,7.4366,4.6714,6.6981,5.5693,6.8387,521,497,328,44,125,60,71,144,110,277,241,179,199,165,203,-0.572541854,0.057348731,0.099309251,false,-0.616445272,0.007554763,0.014772925,false,-2.073536883,"3.34313E-08","1.63083E-07","down",-1.415634513,"1.58619E-05","5.01213E-05","down",-0.829562637,0.026661373,0.069132173,false,-0.784180033,0.011381229,0.047035953,false,0.655085957,0.146924284,0.602375644,false,-1.482838406,0.000395463,0.002891572,"down",-1.427714259,"8.48692E-05",0.001930621,"down","chr_005",4186965,4189484,"+","MS05G02830","--","K20858 calcium uniporter protein, mitochondrial | (RefSeq) calcium uniporter protein 6, mitochondrial-like (A)","--","calcium uniporter protein 6, mitochondrial-like [Malus domestica]","MCU6_ARATH RecName: Full=Calcium uniporter protein 6, mitochondrial; Flags: Precursor;","A0A540L2X4_MALBA RecName: Full=Calcium uniporter protein {ECO:0000256|RuleBase:RU367035};","Uncharacterized conserved protein","GO:0031305,integral component of mitochondrial inner membrane; GO:0005739,mitochondrion; GO:1990246,uniplex complex; GO:0005262,calcium channel activity; GO:0015292,uniporter activity; GO:0036444,calcium import into the mitochondrion; GO:0051560,mitochondrial calcium ion homeostasis; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005216,ion channel activity; GO:0005261,cation channel activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015085,calcium ion transmembrane transporter activity; GO:0015267,channel activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022803,passive transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0046873,metal ion transmembrane transporter activity; GO:0015291,secondary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0006816,calcium ion transport; GO:0006851,mitochondrial calcium ion transmembrane transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0030001,metal ion transport; GO:0034220,ion transmembrane transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0070588,calcium ion transmembrane transport; GO:0098655,cation transmembrane transport; GO:0098660,inorganic ion transmembrane transport; GO:0098662,inorganic cation transmembrane transport; GO:1990542,mitochondrial transmembrane transport; GO:0006873,cellular ion homeostasis; GO:0006874,cellular calcium ion homeostasis; GO:0006875,cellular metal ion homeostasis; GO:0019725,cellular homeostasis; GO:0030003,cellular cation homeostasis; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055065,metal ion homeostasis; GO:0055074,calcium ion homeostasis; GO:0055080,cation homeostasis; GO:0055082,cellular chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0072503,cellular divalent inorganic cation homeostasis; GO:0072507,divalent inorganic cation homeostasis; GO:0098771,inorganic ion homeostasis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005740,mitochondrial envelope; GO:0005743,mitochondrial inner membrane; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031224,intrinsic component of membrane; GO:0031300,intrinsic component of organelle membrane; GO:0031301,integral component of organelle membrane; GO:0031304,intrinsic component of mitochondrial inner membrane; GO:0031966,mitochondrial membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0032592,integral component of mitochondrial membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098573,intrinsic component of mitochondrial membrane; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0034702,ion channel complex; GO:0034703,cation channel complex; GO:0034704,calcium channel complex; GO:0098796,membrane protein complex; GO:0098798,mitochondrial protein-containing complex; GO:0098800,inner mitochondrial membrane protein complex; GO:1902495,transmembrane transporter complex; GO:1990351,transporter complex","PF04678.16:Mitochondrial calcium uniporter","--","--","--"]
["MS05G03610",1.5497,0.9914,1.4215,1.7806,1.799,3.2619,1.3312,0.9491,1.6904,3.0712,3.1748,5.237,5.4951,6.3429,4.6406,69,44,62,58,70,122,45,30,68,111,121,236,192,221,162,1.723277877,"3.89699E-08","2.536E-07","up",2.349150845,"1.03145E-20","1.62312E-19","up",0.992456216,0.004129279,0.008563301,false,0.286714359,0.402385414,0.484634876,false,-1.421488101,"2.06279E-05",0.000142361,"down",-2.04270643,"8.756E-14","6.60231E-12","down",-0.706638521,0.048795265,0.39692573,false,-0.711949343,0.036496217,0.108825431,false,-1.330775883,"3.53492E-06",0.000142041,"down","chr_005",4988794,4990697,"+","MS05G03610","--","--","--","hypothetical protein C1H46_010294 [Malus baccata]","--","A0A540MZ81_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE04074.1};","--","--","--","--","--","--"]
["MS05G04250",1.362,1.9554,2.9485,0.0321,0.1881,0.1957,0.3093,0.2315,0.156,1.9962,1.1522,1.2297,0.389,0.6002,1.4377,58,83,123,1,7,7,10,7,6,69,42,53,13,20,48,-0.316202996,0.415296888,0.51558368,false,-1.075938576,0.027325386,0.04664836,"down",-3.659155184,"2.81281E-10","1.81347E-09","down",-2.889770926,"5.70757E-09","2.88334E-08","down",-2.561352911,"7.3567E-07","7.01021E-06","down",-1.791835098,0.006150555,0.028926941,"down","NA","NA","NA","NA",-3.327711515,"4.17245E-08","9.66096E-07","down",-2.566977411,0.000725015,0.010525525,"down","chr_005",5826541,5829191,"-","MS05G04250","--","K01568 pyruvate decarboxylase [EC:4.1.1.1] | (RefSeq) pyruvate decarboxylase 1-like isoform X1 (A)","ko00010: Glycolysis / Gluconeogenesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","pyruvate decarboxylase 1-like isoform X2 [Malus domestica]","PDC2_TOBAC RecName: Full=Pyruvate decarboxylase 2; Short=NtPDC2; EC=4.1.1.1;","A0A498IMW0_MALDO RecName: Full=Pyruvate decarboxylase {ECO:0000256|ARBA:ARBA00013202}; EC=4.1.1.1 {ECO:0000256|ARBA:ARBA00013202};","Thiamine pyrophosphate-requiring enzyme","GO:0005829,cytosol; GO:0016831,carboxy-lyase activity; GO:0000287,magnesium ion binding; GO:0004737,pyruvate decarboxylase activity; GO:0030976,thiamine pyrophosphate binding; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016830,carbon-carbon lyase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0019842,vitamin binding; GO:0036094,small molecule binding; GO:0043168,anion binding; GO:0050997,quaternary ammonium group binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1901681,sulfur compound binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF02776.21:Thiamine pyrophosphate enzyme, N-terminal TPP binding domain","--","--","--"]
["MS05G05380",4.1258,2.7916,2.2528,0.3935,0.8784,0.5711,1.306,0.9911,0.8142,0.4728,0.7847,0.5056,0.2445,0.5722,0.5303,129,87,69,9,24,15,31,22,23,12,21,16,6,14,13,-2.205453093,"4.76399E-08","3.06111E-07","down",-2.48433696,"2.13097E-08","1.04451E-07","down",-2.086836164,"2.67538E-06","9.88939E-06","down",-1.282997935,0.000914148,0.002137202,"down",0.935035309,0.046955606,0.109168518,false,1.217516547,0.019571496,0.071155788,false,0.80117018,0.114226498,0.553684285,false,0.133962319,0.81216264,0.89828217,false,"NA","NA","NA","NA","chr_005",7073820,7075956,"+","MS05G05380","--","K04802 proliferating cell nuclear antigen | (RefSeq) proliferating cell nuclear antigen-like (A)","ko03030: DNA replication; ko03410: Base excision repair; ko03420: Nucleotide excision repair; ko03430: Mismatch repair","proliferating cell nuclear antigen-like [Malus domestica]","PCNA_TOBAC RecName: Full=Proliferating cell nuclear antigen; Short=PCNA;","A0A498INA5_MALDO RecName: Full=Proliferating cell nuclear antigen {ECO:0000256|RuleBase:RU000641};","DNA polymerase delta processivity factor (proliferating cell nuclear antigen)","GO:0043626,PCNA complex; GO:0003677,DNA binding; GO:0030337,DNA polymerase processivity factor activity; GO:0006272,leading strand elongation; GO:0006298,mismatch repair; GO:0006275,regulation of DNA replication; GO:0019985,translesion synthesis; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0008047,enzyme activator activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006260,DNA replication; GO:0006261,DNA-templated DNA replication; GO:0006271,DNA strand elongation involved in DNA replication; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0022616,DNA strand elongation; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006281,DNA repair; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0033554,cellular response to stress; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051052,regulation of DNA metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0080090,regulation of primary metabolic process; GO:0000731,DNA synthesis involved in DNA repair; GO:0006301,postreplication repair; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071897,DNA biosynthetic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0044796,DNA polymerase processivity factor complex; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:0150005,enzyme activator complex","PF02747.18:Proliferating cell nuclear antigen, C-terminal domain","--","--","--"]
["MS05G06550",0.0914,0.55,0,16.7367,36.8036,15.0111,15.8864,12.227,12.1362,28.3668,18.7876,17.3339,33.0687,20.9011,28.5527,1,6,0,134,352,138,132,95,120,252,176,192,284,179,245,6.839582662,"1.70976E-26","6.52778E-25","up",7.295086401,"7.75894E-33","2.68356E-31","up",6.96581533,"2.04648E-21","3.89002E-20","up",6.248550922,"3.57611E-23","5.96352E-22","up",-0.577038943,0.047340842,0.10985736,false,-1.031592694,"5.68559E-05",0.000601443,"down",-0.726961238,0.069832365,0.461513507,false,0.148509787,0.721072468,0.84200049,false,-0.297375841,0.447929405,0.720870198,false,"chr_005",9343628,9344095,"+","MS05G06550","--","K08248 (R)-mandelonitrile lyase [EC:4.1.2.10] | (RefSeq) (R)-mandelonitrile lyase 2-like isoform X1 (A)","ko00460: Cyanoamino acid metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","(R)-mandelonitrile lyase 2 isoform X1 [Pyrus x bretschneideri]","--","A0A540NLI2_MALBA RecName: Full=(R)-mandelonitrile lyase {ECO:0000256|ARBA:ARBA00013074}; EC=4.1.2.10 {ECO:0000256|ARBA:ARBA00013074};","--","GO:0050660,flavin adenine dinucleotide binding; GO:0046593,mandelonitrile lyase activity; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016830,carbon-carbon lyase activity; GO:0016832,aldehyde-lyase activity; GO:0016491,oxidoreductase activity","--","--","--","--"]
["MS05G07370",2.5511,2.8032,2.5547,0.8303,1.1677,1.3595,1.5041,0.8898,1.7211,1.5266,1.6747,1.4404,1.1456,0.6831,0.9917,105,115,103,25,42,47,47,26,64,51,59,60,37,22,32,-0.585857669,0.013886378,0.029267266,false,-1.193496378,"6.35049E-05",0.000186308,"down",-1.017680352,0.000426822,0.00107585,"down",-0.657311558,0.028411909,0.048622543,false,-0.060692889,0.856634011,0.912325499,false,0.549545998,0.164292207,0.333052272,false,0.357688269,0.350361957,0.778155712,false,-0.416975669,0.204828519,0.378475761,false,0.199171287,0.609947539,0.827467321,false,"chr_005",10520806,10524640,"-","MS05G07370","--","--","--","hypothetical protein C1H46_029913 [Malus baccata]","ALPL_ARATH RecName: Full=Protein ALP1-like {ECO:0000305}; EC=3.1.-.-;","A0A540LDH9_MALBA RecName: Full=DDE Tnp4 domain-containing protein {ECO:0000259|Pfam:PF13359};","Predicted transposase","GO:0000118,histone deacetylase complex; GO:0046872,metal ion binding; GO:0004518,nuclease activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:1902494,catalytic complex","PF13359.9:DDE superfamily endonuclease","--","--","--"]
["MS05G07770",5.0013,4.6413,3.5739,8.0331,7.583,11.6104,9.8815,4.7553,7.6117,5.3914,5.4048,6.3006,3.9834,9.2675,6.6981,40,37,28,47,53,78,60,27,55,35,37,51,25,58,42,0.557581147,0.098446953,0.157535382,false,0.87798674,0.027158538,0.046409125,false,1.247995791,0.000204202,0.000546485,"up",1.032360675,0.007777572,0.015158724,"up",0.488745804,0.186004185,0.316859663,false,0.168208709,0.690274771,0.822326904,false,-0.217152133,0.549644839,0.874104589,false,0.708117136,0.025875235,0.083945177,false,0.393118378,0.301201198,0.593663857,false,"chr_005",11158313,11159534,"-","MS05G07770","--","--","--","chitinase 2-like [Malus domestica]","CHIT2_TULSB RecName: Full=Chitinase 2; EC=3.2.1.14; AltName: Full=Tulip bulb chitinase-2; Short=TBC-2;","A0A498IK97_MALDO RecName: Full=GH18 domain-containing protein {ECO:0000259|PROSITE:PS51910};","--","GO:0008061,chitin binding; GO:0004568,chitinase activity; GO:0006032,chitin catabolic process; GO:0000272,polysaccharide catabolic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0097367,carbohydrate derivative binding; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0006022,aminoglycan metabolic process; GO:0006026,aminoglycan catabolic process; GO:0006030,chitin metabolic process; GO:0006040,amino sugar metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0043170,macromolecule metabolic process; GO:0046348,amino sugar catabolic process; GO:0071704,organic substance metabolic process; GO:1901071,glucosamine-containing compound metabolic process; GO:1901072,glucosamine-containing compound catabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901136,carbohydrate derivative catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0016052,carbohydrate catabolic process; GO:0044238,primary metabolic process","--","--","--","--"]
["MS05G09630",27.4009,32.2852,25.9979,8.5286,3.5906,7.9054,5.2384,6.4757,6.4616,10.2036,10.486,11.6443,10.0432,11.0039,8.9817,751,882,698,171,86,182,109,126,160,227,246,323,216,236,193,-1.219704095,"8.98806E-14","1.17265E-12","down",-1.221344353,"1.3007E-12","1.03083E-11","down",-1.897611996,"5.54907E-10","3.46073E-09","down",-1.956947744,"3.77829E-25","7.1413E-24","down",-0.723011621,0.000128332,0.000718447,false,-0.719394422,0.000367447,0.002903812,false,-0.056368577,0.864797896,0.968893414,false,-0.661415485,0.034953617,0.105354461,false,-0.65349598,0.036862399,0.174241469,false,"chr_005",14275241,14279287,"+","MS05G09630","--","K04565 superoxide dismutase, Cu-Zn family [EC:1.15.1.1] | (RefSeq) superoxide dismutase [Cu-Zn], chloroplastic (A)","ko04146: Peroxisome","hypothetical protein DVH24_005825 [Malus domestica]","SODCP_SOLCS RecName: Full=Superoxide dismutase [Cu-Zn], chloroplastic; EC=1.15.1.1; Flags: Precursor;","A0A498INN8_MALDO RecName: Full=Superoxide dismutase {ECO:0000256|ARBA:ARBA00012682}; EC=1.15.1.1 {ECO:0000256|ARBA:ARBA00012682};","Cu2+/Zn2+ superoxide dismutase SOD1","GO:0009507,chloroplast; GO:0046872,metal ion binding; GO:0004784,superoxide dismutase activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016209,antioxidant activity; GO:0016491,oxidoreductase activity; GO:0016721,oxidoreductase activity, acting on superoxide radicals as acceptor; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00080.23:Copper/zinc superoxide dismutase (SODC)","--","--","--"]
["MS05G10500",2.5388,2.9153,2.8103,1.6725,1.2251,2.1849,1.3295,1.0341,0.8464,0.829,1.4294,1.6018,1.1304,1.5245,0.7803,83,95,90,40,35,60,33,24,25,22,40,53,29,39,20,-0.908416345,0.003224511,0.008044535,false,-0.97353173,0.00262797,0.005691623,false,-0.496009955,0.095258207,0.140449508,false,-1.084964611,0.000723162,0.001721126,"down",-0.156477782,0.707143165,0.809824468,false,-0.09381124,0.826673757,0.905427962,false,-0.587320651,0.128989445,0.577156082,false,0.431985027,0.268026288,0.453748941,false,0.501387372,0.207734394,0.487592678,false,"chr_005",15979313,15983717,"+","MS05G10500","--","K08286 protein-serine/threonine kinase [EC:2.7.11.-] | (RefSeq) serine/threonine-protein kinase D6PKL1-like (A)","--","serine/threonine-protein kinase D6PKL1-like [Malus domestica]","G11A_ORYSI RecName: Full=Protein kinase G11A; EC=2.7.11.1;","A0A498INE2_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","Putative serine/threonine protein kinase","GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF00069.28:Protein kinase domain","--","--","--"]
["MS05G10520",56.6318,82.407,68.1037,2.4972,6.4262,7.9744,2.7627,4.0029,1.5727,12.5035,13.0428,14.3735,12.0714,19.9736,20.5393,837,1214,986,27,83,99,31,42,21,150,165,215,140,231,238,-2.187803952,"5.86473E-30","2.94242E-28","down",-1.689658017,"6.06762E-13","4.98663E-12","down",-3.401614662,"2.64063E-21","4.98125E-20","down",-4.360200878,"8.52201E-43","4.01155E-41","down",-2.156643011,"6.83878E-10","1.13937E-08","down",-2.652080457,"7.8175E-13","5.16309E-11","down",-0.946607973,0.070040023,0.462018766,false,-1.194909902,0.001890653,0.010540058,"down",-1.685991754,"2.692E-05",0.000757531,"down","chr_005",16003911,16004897,"+","MS05G10520","--","--","--","MLP-like protein 423 [Malus domestica]","ML423_ARATH RecName: Full=MLP-like protein 423;","A0A498IJZ5_MALDO RecName: Full=Bet_v_1 domain-containing protein {ECO:0000259|SMART:SM01037};","--","GO:0005829,cytosol; GO:0005634,nucleus; GO:0010427,abscisic acid binding; GO:0004864,protein phosphatase inhibitor activity; GO:0038023,signaling receptor activity; GO:0009738,abscisic acid-activated signaling pathway; GO:0006952,defense response; GO:0003674,molecular_function; GO:0005488,binding; GO:0008289,lipid binding; GO:0019840,isoprenoid binding; GO:0031406,carboxylic acid binding; GO:0033293,monocarboxylic acid binding; GO:0036094,small molecule binding; GO:0042562,hormone binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0043177,organic acid binding; GO:0043178,alcohol binding; GO:0004857,enzyme inhibitor activity; GO:0019208,phosphatase regulator activity; GO:0019212,phosphatase inhibitor activity; GO:0019888,protein phosphatase regulator activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0060089,molecular transducer activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006950,response to stress; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00407.22:Pathogenesis-related protein Bet v 1 family","--","--","--"]
["MS05G11940",2.7499,1.0576,2.854,0.0627,0.4196,0.0546,0,0.2582,0.2029,1.4681,0.9103,0.8604,1.577,0.5857,0.7015,60,23,61,1,8,1,0,4,4,26,17,19,27,10,12,-0.847748321,0.091667919,0.148244879,false,-0.913764437,0.098041974,0.14420206,false,-3.359482768,"2.74191E-05","8.55188E-05","down",-3.568528607,"3.6102E-06","1.25354E-05","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_005",20124841,20128888,"+","MS05G11940","--","--","--","TMV resistance protein N-like [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5I0M4_9ROSA SubName: Full=TMV resistance protein N-like {ECO:0000313|EMBL:KAB2631952.1};","--","--","--","--","--","--"]
["MS05G14130",3.2503,4.4837,4.0093,1.3884,0.2712,1.5316,1.0257,0.4292,2.4734,1.1262,1.5426,1.405,0.8629,1.1249,0.8205,96,132,116,30,7,38,23,9,66,27,39,42,20,26,19,-1.341049629,"1.84482E-06","9.15165E-06","down",-1.771334222,"1.89537E-08","9.35084E-08","down",-1.690724964,0.000884527,0.002095817,"down",-1.306062835,0.008923631,0.017191946,"down",0.050430538,0.930680078,0.958553267,false,0.482459766,0.418012563,0.61131309,false,0.382006848,0.604158026,0.893024763,false,-0.332847714,0.568132361,0.735713395,false,0.102736779,0.864748019,0.950399904,false,"chr_005",27342535,27344558,"+","MS05G14130","--","--","--","chaperonin-like RbcX protein 2, chloroplastic [Malus domestica]","RBCX2_ARATH RecName: Full=Chaperonin-like RbcX protein 2, chloroplastic {ECO:0000303|PubMed:21922322}; Short=AtRBCX2 {ECO:0000303|PubMed:21922322}; Flags: Precursor;","A0A498IR74_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH83971.1};","--","GO:0009570,chloroplast stroma; GO:0044183,protein folding chaperone; GO:0015977,carbon fixation; GO:0061077,chaperone-mediated protein folding; GO:0015979,photosynthesis; GO:0110102,ribulose bisphosphate carboxylase complex assembly; GO:0003674,molecular_function; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0071704,organic substance metabolic process; GO:0006457,protein folding; GO:0009987,cellular process; GO:0044237,cellular metabolic process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009532,plastid stroma; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02341.18:RbcX protein","--","--","--"]
["MS05G15010",7.8583,7.5621,7.7988,15.027,13.2299,15.864,9.9667,9.6727,10.8928,14.0819,15.7726,17.1281,15.6253,18.1844,15.6019,539,517,524,754,793,914,519,471,675,784,926,1189,841,976,839,1.202480534,"3.88788E-21","1.02216E-19","up",1.381316408,"8.64193E-26","1.95599E-24","up",1.137816247,"2.90794E-18","4.21489E-17","up",0.677224073,"1.91922E-07","7.97442E-07",false,-0.512018133,0.000126865,0.00071192,false,-0.688770774,"9.8383E-07","1.80421E-05",false,-0.461836152,0.000538099,0.042035771,false,-0.047248895,0.728039912,0.846239824,false,-0.21846236,0.119171675,0.357551467,false,"chr_005",29533368,29536919,"+","MS05G15010","--","K14411 RNA-binding protein Musashi | (RefSeq) heterogeneous nuclear ribonucleoprotein 1-like (A)","ko03015: mRNA surveillance pathway","hypothetical protein DVH24_003239, partial [Malus domestica]","RNP1_ARATH RecName: Full=Heterogeneous nuclear ribonucleoprotein 1; Short=hnRNP1;","A0A498IMP4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH82741.1}; Flags: Fragment;","RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1","GO:0005829,cytosol; GO:0005634,nucleus; GO:0005681,spliceosomal complex; GO:0003729,mRNA binding; GO:0006397,mRNA processing; GO:0051028,mRNA transport; GO:1901000,regulation of response to salt stress; GO:2000070,regulation of response to water deprivation; GO:0008380,RNA splicing; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016071,mRNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006403,RNA localization; GO:0006810,transport; GO:0015931,nucleobase-containing compound transport; GO:0033036,macromolecule localization; GO:0050657,nucleic acid transport; GO:0050658,RNA transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051236,establishment of RNA localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0009628,response to abiotic stimulus; GO:0009651,response to salt stress; GO:0047484,regulation of response to osmotic stress; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0001101,response to acid chemical; GO:0009414,response to water deprivation; GO:0009415,response to water; GO:0010035,response to inorganic substance; GO:0042221,response to chemical; GO:1901700,response to oxygen-containing compound; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0032991,protein-containing complex; GO:0140513,nuclear protein-containing complex; GO:1990904,ribonucleoprotein complex","PF00076.25:RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","--","--","--"]
["MS05G15850",1.6375,1.8305,2.9611,0.7035,0.4818,1.0025,0.4314,0.7908,1.3464,0.4035,1.2025,0.8321,0.8347,0.7175,1.3128,35,39,62,11,9,18,7,12,26,7,22,18,14,12,22,-1.214166856,0.012043514,0.025837003,"down",-0.868851578,0.050214483,0.079878564,false,-1.345409677,0.004928521,0.010061061,"down",-1.031251675,0.040415713,0.066528382,false,0.193031945,0.763950597,0.85034407,false,-0.146576235,0.802241642,0.891165772,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_005",31187990,31188903,"-","MS05G15850","--","--","--","glycine-rich protein 5 [Malus domestica]","--","A0A5N5FS74_9ROSA SubName: Full=Glycine-rich cell wall structural protein {ECO:0000313|EMBL:KAB2605996.1};","--","--","--","--","--","--"]
["MS05G16540",7.064,8.4935,7.4314,2.1376,0.3702,1.3481,0.2841,0.6077,0.8953,1.7273,2.6459,1.7583,1.3056,1.6539,1.857,131,157,135,29,6,21,4,8,15,26,42,33,19,24,27,-1.72836257,"4.07937E-10","3.51559E-09","down",-1.964253562,"1.03363E-11","7.45187E-11","down",-2.387578571,"5.87728E-07","2.39638E-06","down",-3.383895444,"2.54389E-17","2.8548E-16","down",-1.654036007,0.002226901,0.008646438,"down",-1.412221836,0.010914106,0.045437315,"down",-1.016462093,0.177999992,0.636267693,false,-0.643735914,0.284177193,0.471435851,false,-0.39761104,0.50755835,0.76355508,false,"chr_005",32641000,32644342,"+","MS05G16540","--","--","--","protein LHCP TRANSLOCATION DEFECT-like [Malus sylvestris]","LTD_ARATH RecName: Full=Protein LHCP TRANSLOCATION DEFECT; AltName: Full=Protein GRANA-DEFICIENT CHLOROPLAST 1; Flags: Precursor;","A0A540LVZ8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD90546.1};","--","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0009535,chloroplast thylakoid membrane; GO:0090391,granum assembly; GO:0006886,intracellular protein transport; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009658,chloroplast organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0044085,cellular component biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0006810,transport; GO:0008104,protein localization; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0009534,chloroplast thylakoid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane","PF12796.10:Ankyrin repeats (3 copies)","--","--","--"]
["MS05G17230",3.8657,3.208,3.9463,0.9786,2.3483,2.2726,1.9487,2.4201,1.7432,4.5273,5.2969,5.1871,3.9532,2.9885,3.8349,81,67,81,15,43,40,31,36,33,77,95,110,65,49,63,0.632509169,0.006326856,0.014661033,false,0.26210666,0.328480493,0.408639528,false,-0.751668391,0.051084182,0.081447031,false,-0.571111643,0.067213049,0.104313643,false,-1.192259648,"4.249E-05",0.000269173,"down",-0.817778752,0.012201863,0.049561449,false,0.182569185,0.68280402,0.918040158,false,-1.364448401,0.00022499,0.00179707,"down",-0.986838799,0.013067351,0.086879545,false,"chr_005",33689387,33693523,"-","MS05G17230","--","K03809 NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] | (RefSeq) probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 (A)","ko00130: Ubiquinone and other terpenoid-quinone biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01240: Biosynthesis of cofactors","probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Malus domestica]","FQRL1_ARATH RecName: Full=Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 {ECO:0000305}; EC=1.6.5.2 {ECO:0000250|UniProtKB:Q9LSQ5};","A0A5N5FRQ5_9ROSA RecName: Full=NAD(P)H dehydrogenase (quinone) {ECO:0000256|ARBA:ARBA00012648}; EC=1.6.5.2 {ECO:0000256|ARBA:ARBA00012648};","1,4-benzoquinone reductase-like; Trp repressor binding protein-like/protoplast-secreted protein","GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0010181,FMN binding; GO:0050136,NADH dehydrogenase (quinone) activity; GO:0008753,NADPH dehydrogenase (quinone) activity; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0032553,ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0003954,NADH dehydrogenase activity; GO:0003955,NAD(P)H dehydrogenase (quinone) activity; GO:0016491,oxidoreductase activity; GO:0016651,oxidoreductase activity, acting on NAD(P)H; GO:0016655,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF03358.18:NADPH-dependent FMN reductase","--","--","--"]
["MS05G18470",2.5087,2.3276,2.5032,0.4126,0.2374,0.6063,0.3478,0.4251,0.3967,1.0922,1.6528,1.3792,0.5288,0.7955,0.4812,133,123,130,16,11,27,14,16,19,47,75,74,22,33,20,-0.648235104,0.005932977,0.013844843,false,-1.731807508,"4.79221E-09","2.55547E-08","down",-2.345438217,"2.27092E-11","1.66811E-10","down",-2.370335357,"6.59834E-14","5.62893E-13","down",-1.707288246,"3.94648E-06","3.23625E-05","down",-0.62136466,0.169898825,0.340572995,false,"NA","NA","NA","NA",-1.681379933,"5.221E-05",0.000522597,"down",-0.591600159,0.230158169,0.515422708,false,"chr_005",36023664,36030040,"+","MS05G18470","--","K15377 solute carrier family 44 (choline transporter-like protein), member 2/4/5 | (RefSeq) LOW QUALITY PROTEIN: choline transporter protein 1 (A)","--","hypothetical protein DVH24_003644 [Malus domestica]","CHER1_ARATH RecName: Full=Choline transporter protein 1 {ECO:0000303|PubMed:25008948}; Short=AtCTL1 {ECO:0000303|PubMed:25008948}; AltName: Full=Protein SIGNIFICANT IONOME CHANGES 1 {ECO:0000303|PubMed:29284002};","A0A498IIG2_MALDO RecName: Full=Choline transporter-like protein {ECO:0000256|RuleBase:RU368066};","Choline transporter-like protein","GO:0005856,cytoskeleton; GO:0031901,early endosome membrane; GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0009524,phragmoplast; GO:0009705,plant-type vacuole membrane; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0009551,secondary plasmodesma; GO:0097218,sieve plate; GO:0055044,symplast; GO:0005802,trans-Golgi network; GO:0032588,trans-Golgi network membrane; GO:0015220,choline transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0015871,choline transport; GO:0006897,endocytosis; GO:0050801,ion homeostasis; GO:0048366,leaf development; GO:0055088,lipid homeostasis; GO:0010088,phloem development; GO:0009663,plasmodesma organization; GO:0010497,plasmodesmata-mediated intercellular transport; GO:0010067,procambium histogenesis; GO:0015031,protein transport; GO:2000012,regulation of auxin polar transport; GO:0030100,regulation of endocytosis; GO:0051510,regulation of unidimensional cell growth; GO:0048364,root development; GO:0090603,sieve element differentiation; GO:0055085,transmembrane transport; GO:0016192,vesicle-mediated transport; GO:0010051,xylem and phloem pattern formation; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015101,organic cation transmembrane transporter activity; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0008150,biological_process; GO:0015695,organic cation transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:0009888,tissue development; GO:0010087,phloem or xylem histogenesis; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0034330,cell junction organization; GO:0045216,cell-cell junction organization; GO:0071840,cellular component organization or biogenesis; GO:0010496,intercellular transport; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0009793,embryo development ending in seed dormancy; GO:0010065,primary meristem tissue development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0048316,seed development; GO:0048507,meristem development; GO:0048508,embryonic meristem development; GO:0048608,reproductive structure development; GO:0061458,reproductive system development; GO:0008104,protein localization; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0009914,hormone transport; GO:0009926,auxin polar transport; GO:0010817,regulation of hormone levels; GO:0032879,regulation of localization; GO:0050789,regulation of biological process; GO:0051049,regulation of transport; GO:0060918,auxin transport; GO:0050794,regulation of cellular process; GO:0051128,regulation of cellular component organization; GO:0060627,regulation of vesicle-mediated transport; GO:0000902,cell morphogenesis; GO:0001558,regulation of cell growth; GO:0009653,anatomical structure morphogenesis; GO:0009826,unidimensional cell growth; GO:0016049,cell growth; GO:0022603,regulation of anatomical structure morphogenesis; GO:0022604,regulation of cell morphogenesis; GO:0040007,growth; GO:0040008,regulation of growth; GO:0048589,developmental growth; GO:0048638,regulation of developmental growth; GO:0050793,regulation of developmental process; GO:0060560,developmental growth involved in morphogenesis; GO:0022622,root system development; GO:0030154,cell differentiation; GO:0048869,cellular developmental process; GO:0003002,regionalization; GO:0007389,pattern specification process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0005769,early endosome; GO:0010008,endosome membrane; GO:0012505,endomembrane system; GO:0012506,vesicle membrane; GO:0030659,cytoplasmic vesicle membrane; GO:0031090,organelle membrane; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane; GO:0000325,plant-type vacuole; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0070161,anchoring junction; GO:0005618,cell wall; GO:0009505,plant-type cell wall; GO:0030312,external encapsulating structure; GO:0005794,Golgi apparatus; GO:0031984,organelle subcompartment; GO:0098791,Golgi apparatus subcompartment","PF04515.15:Plasma-membrane choline transporter","--","--","--"]
["MS05G19870",0.6599,0.309,0.3593,0.7818,13.3405,1.2046,0.4636,2.3548,1.4121,17.8314,3.8034,5.9117,5.1578,4.1603,8.8658,15,7,8,13,265,23,8,38,29,329,74,136,92,74,158,4.589828416,"8.60331E-14","1.12693E-12","up",4.061212151,"9.95606E-20","1.47331E-18","up",3.787517242,1,1,false,1.94912652,0.003984114,0.008252846,"up",-2.622217512,"7.17513E-05",0.000429449,"down",-2.096812703,"3.70068E-05",0.000419881,"down",-1.848278868,0.158076097,0.613916261,false,-0.773106698,0.557652623,0.72790457,false,-0.236717786,0.845456522,0.942551374,false,"chr_005",38192977,38194075,"-","MS05G19870","--","--","--","hypothetical protein DVH24_026901 [Malus domestica]","EP1G_DAUCA RecName: Full=Epidermis-specific secreted glycoprotein EP1; AltName: Full=52/54 kDa medium protein; Flags: Precursor;","A0A498IPX0_MALDO RecName: Full=Bulb-type lectin domain-containing protein {ECO:0000259|PROSITE:PS50927};","--","GO:0005576,extracellular region; GO:0030246,carbohydrate binding; GO:0006833,water transport; GO:0003674,molecular_function; GO:0005488,binding; GO:0006810,transport; GO:0008150,biological_process; GO:0042044,fluid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00954.23:S-locus glycoprotein domain","--","--","--"]
["MS05G20680",3.2173,2.6557,2.8686,1.0021,0.2796,0.2424,0.4828,0.8605,1.5326,0.4516,0.4282,1.0462,0.3633,0.5725,0.6753,79,65,69,18,6,5,9,15,34,9,9,26,7,11,13,-1.973611372,"3.75715E-06","1.76739E-05","down",-2.150629415,"1.05924E-07","4.73467E-07","down",-2.331025162,"1.68791E-05","5.46598E-05","down",-1.317362926,0.001962772,0.004331931,"down",0.675550431,0.292117758,0.4408616,false,"NA","NA","NA","NA",0.993625812,0.180700395,0.63897753,false,-0.308033616,0.695102018,0.824771911,false,"NA","NA","NA","NA","chr_005",39472505,39474031,"+","MS05G20680","--","K20718 LRR receptor-like serine/threonine-protein kinase ERECTA [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase ERL1 (A)","ko04016: MAPK signaling pathway - plant","receptor-like serine/threonine-protein kinase At1g78530 [Malus sylvestris]","Y1853_ARATH RecName: Full=Receptor-like serine/threonine-protein kinase At1g78530; EC=2.7.11.1;","A0A5N5FVN9_9ROSA SubName: Full=Receptor-like serine/threonine-protein kinase {ECO:0000313|EMBL:KAB2605430.1};","Serine/threonine protein kinase","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS05G20930",0.7346,0.8157,1.0047,0.4289,0.1632,0.3141,0.2818,0.2612,0.4342,0.2812,0.25,0.4439,0.2272,0.2278,0.091,103,114,138,44,20,37,30,26,55,32,30,63,25,25,10,-1.190706989,0.000128621,0.000449754,"down",-1.927980407,"1.40331E-07","6.16903E-07","down",-1.2938514,0.000458049,0.001148825,"down",-1.096552211,0.000270873,0.000694174,"down",0.107412977,0.787096691,0.866922987,false,0.841109614,0.073747116,0.189789263,false,0.19159362,0.666998049,0.91408269,false,-0.078645996,0.864839079,0.927888408,false,0.66032086,0.212664388,0.494032433,false,"chr_005",39793903,39805532,"-","MS05G20930","--","K11000 callose synthase [EC:2.4.1.-] | (RefSeq) putative callose synthase 8 (A)","--","putative callose synthase 8 [Malus sylvestris]","CALS8_ARATH RecName: Full=Putative callose synthase 8; EC=2.4.1.34; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 4;","A0A540LGQ6_MALBA RecName: Full=1,3-beta-glucan synthase {ECO:0000256|ARBA:ARBA00012589}; EC=2.4.1.34 {ECO:0000256|ARBA:ARBA00012589}; AltName: Full=1,3-beta-glucan synthase {ECO:0000256|ARBA:ARBA00032165};","1,3-beta-glucan synthase/callose synthase catalytic subunit","GO:0000148,1,3-beta-D-glucan synthase complex; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0003843,1,3-beta-D-glucan synthase activity; GO:0046527,glucosyltransferase activity; GO:0006075,(1->3)-beta-D-glucan biosynthetic process; GO:0071555,cell wall organization; GO:0008360,regulation of cell shape; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0006074,(1->3)-beta-D-glucan metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0000902,cell morphogenesis; GO:0009653,anatomical structure morphogenesis; GO:0022603,regulation of anatomical structure morphogenesis; GO:0022604,regulation of cell morphogenesis; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0016020,membrane; GO:0032991,protein-containing complex; GO:0071944,cell periphery; GO:0098796,membrane protein complex; GO:0098797,plasma membrane protein complex; GO:0110165,cellular anatomical entity; GO:1902494,catalytic complex; GO:1990234,transferase complex; GO:0031224,intrinsic component of membrane","PF02364.18:1,3-beta-glucan synthase component","--","--","--"]
["MS05G21670",3.9147,3.0896,2.2912,13.7706,10.9153,14.4938,14.9878,11.0836,14.299,4.871,6.9974,5.7633,6.502,5.6698,7.5729,300,236,172,772,731,933,872,603,990,303,459,447,391,340,455,1.099933026,"7.03994E-06","3.14541E-05","up",1.373886049,"8.78974E-09","4.52619E-08","up",2.280622199,"2.91886E-21","5.4818E-20","up",2.395219069,"3.79659E-23","6.31703E-22","up",1.307598604,"1.30702E-11","2.81054E-10","up",1.037205306,"4.10426E-08","1.04008E-06","up",0.113966546,0.527058314,0.865683885,false,1.195888947,"9.53505E-11","3.87782E-09","up",0.93075221,"2.52838E-07","1.52021E-05",false,"chr_005",40772303,40776463,"-","MS05G21670","--","--","--","hypothetical protein DVH24_027085 [Malus domestica]","TIC_ARATH RecName: Full=Protein TIME FOR COFFEE;","A0A498ILG6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH84186.1};","--","GO:0005634,nucleus; GO:0042752,regulation of circadian rhythm; GO:0048511,rhythmic process; GO:0007623,circadian rhythm; GO:0008150,biological_process; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS05G22390",3.1952,4.1946,2.776,8.2709,3.3062,3.035,4.925,6.0808,11.0615,1.6751,1.3502,1.8136,3.7253,3.1711,2.1678,94,123,80,178,85,75,110,127,294,40,34,54,86,73,50,-0.881988208,0.003964773,0.009686094,false,0.127891033,0.677468959,0.739619318,false,0.737074504,0.088414898,0.131715822,false,1.386297426,"3.18028E-05","9.56656E-05","up",2.285786809,"1.31015E-10","2.43403E-09","up",1.27801644,0.000308701,0.002511812,"up",0.652475499,0.150771912,0.604607338,false,1.637027475,0.000280417,0.002168992,"up",0.632447485,0.150917839,0.409389377,false,"chr_005",41671757,41674483,"+","MS05G22390","--","K14490 histidine-containing phosphotransfer peotein | (RefSeq) histidine-containing phosphotransfer protein 1 (A)","ko04075: Plant hormone signal transduction","histidine-containing phosphotransfer protein 1 [Malus domestica]","AHP1_ARATH RecName: Full=Histidine-containing phosphotransfer protein 1;","A0A540LJ24_MALBA RecName: Full=Histidine-containing phosphotransfer protein {ECO:0000256|RuleBase:RU369004};","Two-component phosphorelay intermediate involved in MAP kinase cascade regulation","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005634,nucleus; GO:0009927,histidine phosphotransfer kinase activity; GO:0043424,protein histidine kinase binding; GO:0009736,cytokinin-activated signaling pathway; GO:0009553,embryo sac development; GO:0009825,multidimensional cell growth; GO:0000160,phosphorelay signal transduction system; GO:0016310,phosphorylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0060089,molecular transducer activity; GO:0140096,catalytic activity, acting on a protein; GO:0005488,binding; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0019900,kinase binding; GO:0019901,protein kinase binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009735,response to cytokinin; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071368,cellular response to cytokinin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0016049,cell growth; GO:0040007,growth; GO:0035556,intracellular signal transduction; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008152,metabolic process; GO:0044237,cellular metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01627.26:Hpt domain","--","--","--"]
["MS05G23170",9.2869,10.6382,7.1104,10.9897,18.5577,12.5824,13.8301,17.8652,11.8903,23.2669,13.5218,18.1811,16.7808,14.5252,26.1658,268,306,201,232,468,305,303,366,310,545,334,531,380,328,592,1.2182741,"9.35535E-06","4.07097E-05","up",1.374665424,"1.92855E-07","8.31342E-07","up",0.861020795,0.002861471,0.006133548,false,0.973541706,0.000143157,0.000385389,false,-0.229843271,0.41858735,0.570392031,false,-0.386157767,0.159865416,0.326973811,false,0.107714645,0.717713017,0.928064018,false,-0.335852385,0.283933152,0.471267467,false,-0.486228576,0.1156685,0.352279913,false,"chr_005",42381901,42384748,"+","MS05G23170","--","K00949 thiamine pyrophosphokinase [EC:2.7.6.2] | (RefSeq) thiamine pyrophosphokinase 1-like isoform X1 (A)","ko00730: Thiamine metabolism; ko01100: Metabolic pathways; ko01240: Biosynthesis of cofactors","thiamine pyrophosphokinase 1-like isoform X1 [Malus sylvestris]","TPK1_ARATH RecName: Full=Thiamine pyrophosphokinase 1 {ECO:0000303|PubMed:17611796}; Short=AtTPK1 {ECO:0000303|PubMed:17611796}; EC=2.7.6.2 {ECO:0000269|PubMed:17611796}; AltName: Full=Thiamine kinase 1 {ECO:0000303|PubMed:17611796};","A0A498IMB1_MALDO RecName: Full=Thiamine pyrophosphokinase {ECO:0000256|PIRNR:PIRNR031057}; EC=2.7.6.2 {ECO:0000256|PIRNR:PIRNR031057};","Thiamine pyrophosphokinase","GO:0005829,cytosol; GO:0005524,ATP binding; GO:0016301,kinase activity; GO:0030975,thiamine binding; GO:0004788,thiamine diphosphokinase activity; GO:0016310,phosphorylation; GO:0009229,thiamine diphosphate biosynthetic process; GO:0006772,thiamine metabolic process; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0019842,vitamin binding; GO:0043169,cation binding; GO:0043178,alcohol binding; GO:1901681,sulfur compound binding; GO:0016778,diphosphotransferase activity; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0044237,cellular metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006766,vitamin metabolic process; GO:0006767,water-soluble vitamin metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009058,biosynthetic process; GO:0009110,vitamin biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042357,thiamine diphosphate metabolic process; GO:0042364,water-soluble vitamin biosynthetic process; GO:0042723,thiamine-containing compound metabolic process; GO:0042724,thiamine-containing compound biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044272,sulfur compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0072527,pyrimidine-containing compound metabolic process; GO:0072528,pyrimidine-containing compound biosynthetic process; GO:0090407,organophosphate biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006066,alcohol metabolic process; GO:0034308,primary alcohol metabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF04263.19:Thiamin pyrophosphokinase, catalytic domain","--","--","--"]
["MS06G00490",0.1777,0.2318,0.2721,0.0729,0.122,0.1481,0.0468,0.2503,0,0.2846,0.5191,0.4741,0.2265,0.4315,0.4987,10,13,15,3,6,7,2,10,0,13,25,27,10,19,22,1.092938448,0.02840368,0.054292183,false,1.053561669,0.049117915,0.078296077,false,"NA","NA","NA","NA","NA","NA","NA","NA",-2.004229348,0.039454435,0.095171763,false,-1.968993236,0.041457929,0.125466456,false,"NA","NA","NA","NA",-1.837514325,0.003879098,0.018802483,"down",-1.791462611,0.006755659,0.054402486,false,"chr_006",389370,399489,"+","MS06G00490","--","--","--","hypothetical protein C1H46_024031 [Malus baccata]","YSL7_ARATH RecName: Full=Probable metal-nicotianamine transporter YSL7; AltName: Full=Protein YELLOW STRIPE LIKE 7; Short=AtYSL7;","A0A540LV77_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD90394.1};","--","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0035673,oligopeptide transmembrane transporter activity; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0022857,transmembrane transporter activity; GO:0042887,amide transmembrane transporter activity; GO:1904680,peptide transmembrane transporter activity; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF03169.18:OPT oligopeptide transporter protein","--","--","--"]
["MS06G00940",7.0777,8.103,6.7942,1.7696,2.2542,2.0939,1.9275,2.6559,2.9124,1.9415,1.5781,1.5432,1.7214,1.5464,1.6332,503,574,473,92,140,125,104,134,187,112,96,111,96,86,91,-1.932005093,"1.17317E-22","3.45648E-21","down",-1.872752347,"1.74308E-24","3.60289E-23","down",-1.62695699,"2.10607E-16","2.57624E-15","down",-1.272119045,"7.32591E-10","4.14031E-09","down",0.672093843,0.008512848,0.026949287,false,0.61731106,0.010415494,0.043819743,false,0.353792819,0.164507122,0.618915203,false,0.32113433,0.201849638,0.374605038,false,0.27192338,0.24519506,0.533379115,false,"chr_006",724035,728916,"-","MS06G00940","--","K25870 zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13 | (RefSeq) protein indeterminate-domain 5, chloroplastic-like (A)","--","protein indeterminate-domain 5, chloroplastic-like [Malus domestica]","IDD5_ARATH RecName: Full=Protein indeterminate-domain 5, chloroplastic {ECO:0000303|PubMed:16784536}; AltName: Full=ID1-like zinc finger protein 2 {ECO:0000303|Ref.1}; Flags: Precursor;","A0A498HJB5_MALDO RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};","FOG: Zn-finger","GO:0009507,chloroplast; GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0043565,sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0045893,positive regulation of DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF12171.11:Zinc-finger double-stranded RNA-binding","C2H2","TF","C2H2"]
["MS06G01810",18.3889,14.4222,11.2856,1.8953,1.3778,2.2152,1.682,1.0793,2.4635,1.9778,4.3905,3.1004,0.9764,3.8234,2.6061,504,394,303,38,33,51,35,21,61,44,103,86,21,82,56,-2.047588017,"2.9379E-11","2.93204E-10","down",-2.294797149,"5.20719E-09","2.76329E-08","down",-2.80467099,"2.15971E-21","4.10001E-20","down",-2.796381801,"5.42032E-18","6.39645E-17","down",-0.739602475,0.074597239,0.1574418,false,-0.493357101,0.332478279,0.529143718,false,0.006121728,0.987784142,0.99646999,false,-0.742261325,0.0486956,0.135602919,false,-0.48725567,0.314176038,0.605796969,false,"chr_006",1423760,1430157,"+","MS06G01810","--","K17991 peroxygenase [EC:1.11.2.3] | (RefSeq) probable peroxygenase 4 (A)","ko00073: Cutin, suberine and wax biosynthesis","probable peroxygenase 4 [Malus domestica]","PXG4_ARATH RecName: Full=Probable peroxygenase 4; Short=AtPXG4; EC=1.11.2.3; AltName: Full=Caleosin-4;","A0A540KGE2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD73296.1};","--","GO:0005811,lipid droplet; GO:0102070,18-hydroxyoleate peroxygenase activity; GO:0005509,calcium ion binding; GO:0004497,monooxygenase activity; GO:1990137,plant seed peroxidase activity; GO:0009819,drought recovery; GO:0009737,response to abscisic acid; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016684,oxidoreductase activity, acting on peroxide as acceptor; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0001101,response to acid chemical; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009414,response to water deprivation; GO:0009415,response to water; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:1901700,response to oxygen-containing compound; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0097305,response to alcohol; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF05042.16:Caleosin related protein","--","--","--"]
["MS06G02640",1.6957,1.0725,0.9032,5.0391,8.3944,4.8274,8.2544,7.4773,6.202,6.676,3.876,7.5397,7.1875,8.3854,5.9243,46,29,24,100,199,110,170,144,152,147,90,207,153,178,126,2.492013514,"4.6318E-11","4.50097E-10","up",2.837793951,"1.35996E-20","2.12422E-19","up",2.537807417,"5.92192E-11","4.14159E-10","up",2.860712302,"1.42172E-19","1.88654E-18","up",0.383142822,0.215762025,0.353313892,false,0.035434639,0.881718746,0.936724618,false,0.316311063,0.320182929,0.758586281,false,0.068620921,0.852747679,0.921429119,false,-0.271631732,0.384728136,0.668953399,false,"chr_006",2221627,2224529,"+","MS06G02640","--","K25817 repressor of RNA polymerase III transcription MAF1 | (RefSeq) LOW QUALITY PROTEIN: repressor of RNA polymerase III transcription MAF1 homolog (A)","--","uncharacterized protein LOC126607587 isoform X2 [Malus sylvestris]","--","A0A5N5FSW0_9ROSA RecName: Full=Repressor of RNA polymerase III transcription {ECO:0000256|PIRNR:PIRNR037240};","Mod5 protein sorting/negative effector of RNA Pol III synthesis","GO:0005634,nucleus; GO:0016480,negative regulation of transcription by RNA polymerase III; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006359,regulation of transcription by RNA polymerase III; GO:0006383,transcription by RNA polymerase III; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045892,negative regulation of DNA-templated transcription; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF09174.13:Maf1 regulator","--","--","--"]
["MS06G03560",3.801,2.0749,2.6249,6.1892,10.7459,2.3291,7.5099,8.976,4.2072,18.3868,5.6815,7.7875,5.8411,7.2862,11.3361,68,37,46,81,168,35,102,114,68,267,87,141,82,102,159,2.11507188,"8.38247E-06","3.68726E-05","up",1.810366384,"1.38721E-07","6.1037E-07","up",1.421427279,0.009102294,0.017501137,"up",1.573376243,"5.85423E-05",0.000168714,"up",-0.52584007,0.284103328,0.43264834,false,-0.225676258,0.539630329,0.714028407,false,0.14466265,0.791092684,0.950521192,false,-0.670157285,0.264410163,0.449503611,false,-0.36037768,0.484527214,0.746934694,false,"chr_006",3038938,3040355,"+","MS06G03560","--","--","--","uncharacterized protein LOC126606575 [Malus sylvestris]","--","A0A498HJS5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH70152.1};","--","GO:0010112,regulation of systemic acquired resistance; GO:0002831,regulation of response to biotic stimulus; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009627,systemic acquired resistance; GO:0031347,regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0098542,defense response to other organism","PF15699.8:NPR1 interacting","--","--","--"]
["MS06G04350",0.3693,0.5928,0.7539,1.1105,0.5071,0.7034,0.0973,0,0.5722,1.4558,1.3805,0.6568,4.4235,3.1146,2.5434,5,8,10,11,6,8,1,0,7,16,16,9,47,33,27,"NA","NA","NA","NA",2.85625634,"1.70345E-08","8.45767E-08","up","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-3.822869676,"4.73203E-07","9.38707E-06","down","NA","NA","NA","NA","NA","NA","NA","NA",-2.19567828,"2.21893E-05",0.000652219,"down","chr_006",3744628,3745206,"-","MS06G04350","--","K25786 bZIP transcription factor 1/2/11/44/53 | (RefSeq) bZIP transcription factor 11-like (A)","--","hypothetical protein DVH24_007331 [Malus domestica]","BZP43_ARATH RecName: Full=Basic leucine zipper 43 {ECO:0000303|PubMed:11906833}; Short=AtbZIP43 {ECO:0000303|PubMed:11906833}; Short=bZIP protein 43 {ECO:0000303|PubMed:11906833};","A0A498HKN4_MALDO RecName: Full=BZIP domain-containing protein {ECO:0000259|PROSITE:PS50217};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00170.24:bZIP transcription factor","bZIP","TF","bZIP"]
["MS06G05210",116.6313,97.9256,96.4688,26.4266,31.0037,25.7109,29.5317,36.1925,27.9839,39.3144,40.4569,38.8337,37.0462,32.1775,38.7856,5665,4741,4590,939,1316,1049,1089,1248,1228,1550,1682,1909,1412,1223,1477,-1.205281697,"1.07655E-18","2.27399E-17","down",-1.234764813,"2.93092E-16","3.26928E-15","down",-1.685324681,"1.54407E-21","2.96529E-20","down",-1.44530715,"1.7594E-15","1.71951E-14","down",-0.227794614,0.170735966,0.297224943,false,-0.196112444,0.264830904,0.457098833,false,0.236621663,0.244931845,0.700291883,false,-0.461924822,0.00481232,0.022343365,false,-0.424239214,0.016488458,0.101606732,false,"chr_006",4483510,4486765,"+","MS06G05210","--","K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] | (RefSeq) UDP-glucose 6-dehydrogenase 1 (A)","ko00040: Pentose and glucuronate interconversions; ko00053: Ascorbate and aldarate metabolism; ko00520: Amino sugar and nucleotide sugar metabolism; ko01100: Metabolic pathways; ko01240: Biosynthesis of cofactors; ko01250: Biosynthesis of nucleotide sugars","UDP-glucose 6-dehydrogenase 1 [Malus domestica]","UGDH1_SOYBN RecName: Full=UDP-glucose 6-dehydrogenase 1; Short=UDP-Glc dehydrogenase 1; Short=UDP-GlcDH 1; Short=UDPGDH 1; EC=1.1.1.22; AltName: Full=Gm-UGD1;","A0A498HG55_MALDO RecName: Full=UDP-glucose 6-dehydrogenase {ECO:0000256|ARBA:ARBA00012954, ECO:0000256|PIRNR:PIRNR000124}; EC=1.1.1.22 {ECO:0000256|ARBA:ARBA00012954, ECO:0000256|PIRNR:PIRNR000124};","UDP-glucose/GDP-mannose dehydrogenase","GO:0005829,cytosol; GO:0005634,nucleus; GO:0051287,NAD binding; GO:0003979,UDP-glucose 6-dehydrogenase activity; GO:0006024,glycosaminoglycan biosynthetic process; GO:0006065,UDP-glucuronate biosynthetic process; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0036094,small molecule binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0006022,aminoglycan metabolic process; GO:0006023,aminoglycan biosynthetic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0030203,glycosaminoglycan metabolic process; GO:0043170,macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006082,organic acid metabolic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006793,phosphorus metabolic process; GO:0009225,nucleotide-sugar metabolic process; GO:0009226,nucleotide-sugar biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0046398,UDP-glucuronate metabolic process; GO:0046483,heterocycle metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF03721.17:UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain","--","--","--"]
["MS06G05360",8.2164,9.1995,9.0364,5.4606,4.675,6.8092,3.2886,2.7495,3.9694,4.0266,6.7353,5.6066,5.2064,7.5995,4.7478,181,202,195,88,90,126,55,43,79,72,127,125,90,131,82,-0.510538078,0.022291206,0.044047305,false,-0.29982359,0.201937266,0.269758085,false,-0.43341197,0.042464524,0.069117395,false,-1.116059773,"1.1886E-06","4.43673E-06","down",-0.594343177,0.03972207,0.095679228,false,-0.802957361,0.006567008,0.030445438,false,-0.684337808,0.01121051,0.213347849,false,0.093177252,0.73192142,0.848423918,false,-0.109189191,0.693215204,0.87213513,false,"chr_006",4559991,4562396,"+","MS06G05360","--","--","--","uncharacterized protein LOC126609419 [Malus sylvestris]","--","A0A540LL84_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD87214.1};","--","--","--","--","--","--"]
["MS06G06850",6.6767,5.5735,7.076,0.836,2.2162,5.2485,0.5706,0.6102,1.0437,13.343,25.6934,21.6292,20.6868,16.4135,10.8888,262,218,272,24,76,173,17,17,37,425,863,859,637,504,335,1.827099704,"2.79968E-14","3.87329E-13","up",1.610944825,"2.68111E-10","1.66021E-09","up",-1.025629761,0.04425551,0.071667092,false,-2.822676343,"5.84948E-22","9.0495E-21","down",-4.641392342,"1.32193E-44","4.0816E-42","down",-4.421202242,"1.90336E-38","1.88113E-35","down",-1.812586364,0.002644456,0.099308406,false,-2.837539451,"2.42715E-08","5.9705E-07","down",-2.610006483,"2.66117E-07","1.58629E-05","down","chr_006",5757804,5760873,"+","MS06G06850","--","K12126 phytochrome-interacting factor 3 | (RefSeq) transcription factor PIF3-like (A)","ko04075: Plant hormone signal transduction; ko04712: Circadian rhythm - plant","transcription factor BHLH089-like [Malus domestica]","BH089_ORYSJ RecName: Full=Transcription factor BHLH089 {ECO:0000305}; AltName: Full=Basic helix-loop-helix protein 89 {ECO:0000303|PubMed:16896230}; Short=OsbHLH089 {ECO:0000303|PubMed:16896230}; AltName: Full=bHLH transcription factor bHLH089 {ECO:0000305};","A0A498HK16_MALDO RecName: Full=BHLH domain-containing protein {ECO:0000259|PROSITE:PS50888};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0046983,protein dimerization activity; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0005515,protein binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00010.29:Helix-loop-helix DNA-binding domain","bHLH","TF","bHLH"]
["MS06G07130",13.5226,16.3628,19.8373,20.7428,17.4525,24.8545,15.7382,7.3429,16.196,26.7381,36.3604,44.8521,30.3875,53.4263,31.665,524,632,753,588,591,809,463,202,567,841,1206,1759,924,1620,962,1.302817247,"3.29108E-09","2.51022E-08","up",1.508837272,"7.25041E-10","4.28397E-09","up",0.554057688,0.005290922,0.010722235,false,-0.059688884,0.8401228,0.87666269,false,-1.349503563,"1.59862E-05",0.000113215,"down",-1.553515375,"1.69012E-06","2.87466E-05","down",-0.615496902,0.040509278,0.372982923,false,-0.731804321,0.000856147,0.00551599,false,-0.930196607,0.000246273,0.004476191,false,"chr_006",6042365,6044190,"+","MS06G07130","--","K11820 N-hydroxythioamide S-beta-glucosyltransferase [EC:2.4.1.195] | (RefSeq) UDP-glycosyltransferase 74B1-like (A)","ko00380: Tryptophan metabolism; ko00966: Glucosinolate biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01210: 2-Oxocarboxylic acid metabolism","hypothetical protein DVH24_007067 [Malus domestica]","U74B1_ARATH RecName: Full=UDP-glycosyltransferase 74B1; AltName: Full=N-hydroxythioamide S-beta-glucosyltransferase; EC=2.4.1.195 {ECO:0000269|PubMed:15584955}; AltName: Full=Thiohydroximate S-glucosyltransferase;","A0A498HKX1_MALDO RecName: Full=Glycosyltransferase {ECO:0000256|RuleBase:RU362057}; EC=2.4.1.- {ECO:0000256|RuleBase:RU362057};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0005829,cytosol; GO:0005634,nucleus; GO:0080043,quercetin 3-O-glucosyltransferase activity; GO:0080044,quercetin 7-O-glucosyltransferase activity; GO:0047251,thiohydroximate beta-D-glucosyltransferase activity; GO:0102659,UDP-glucose: 4-methylthiobutylhydroximate S-glucosyltransferase activity; GO:0103100,UDP-glucose: 6-methylthiohexylhydroximate S-glucosyltransferase activity; GO:0103103,UDP-glucose: 9-methylthiononylhydroximate S-glucosyltransferase activity; GO:0103099,UDP-glucose:5-methylthiopentylhydroximate S-glucosyltransferase activity; GO:0103101,UDP-glucose:7-methylthioheptylhydroximate S-glucosyltransferase activity; GO:0103102,UDP-glucose:8-methylthiooctylhydroximate S-glucosyltransferase activity; GO:0052544,defense response by callose deposition in cell wall; GO:0042742,defense response to bacterium; GO:0019761,glucosinolate biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009743,response to carbohydrate; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0016043,cellular component organization; GO:0033036,macromolecule localization; GO:0033037,polysaccharide localization; GO:0033554,cellular response to stress; GO:0042221,response to chemical; GO:0042545,cell wall modification; GO:0045229,external encapsulating structure organization; GO:0050896,response to stimulus; GO:0051179,localization; GO:0051641,cellular localization; GO:0051716,cellular response to stimulus; GO:0052386,cell wall thickening; GO:0052482,defense response by cell wall thickening; GO:0052542,defense response by callose deposition; GO:0052543,callose deposition in cell wall; GO:0052545,callose localization; GO:0070727,cellular macromolecule localization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071840,cellular component organization or biogenesis; GO:1901700,response to oxygen-containing compound; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006082,organic acid metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0016143,S-glycoside metabolic process; GO:0016144,S-glycoside biosynthetic process; GO:0019748,secondary metabolic process; GO:0019757,glycosinolate metabolic process; GO:0019758,glycosinolate biosynthetic process; GO:0019760,glucosinolate metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044272,sulfur compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044550,secondary metabolite biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901657,glycosyl compound metabolic process; GO:1901659,glycosyl compound biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00201.21:UDP-glucoronosyl and UDP-glucosyl transferase","--","--","--"]
["MS06G07940",87.228,108.9621,68.8935,14.7927,84.0551,14.1712,29.5444,63.8368,31.6872,65.69,14.2518,19.6352,26.5781,18.9838,36.6816,2660,3312,2058,330,2240,363,684,1382,873,1626,372,606,636,453,877,-1.193997179,0.085080481,0.139106634,false,-1.400390902,"1.08608E-07","4.84805E-07","down",-0.980642259,0.261850757,0.336474833,false,-0.795149757,0.015150504,0.027687664,false,0.416427856,0.592279634,0.721175159,false,0.620274408,0.072237879,0.187105843,false,0.173667973,0.851617061,0.965838197,false,0.24187521,0.823131779,0.90400586,false,0.453920971,0.61197308,0.828093626,false,"chr_006",6695672,6699032,"-","MS06G07940","--","K01304 pyroglutamyl-peptidase [EC:3.4.19.3] | (RefSeq) uncharacterized protein LOC103451988 (A)","--","uncharacterized protein LOC126607952 [Malus sylvestris]","--","A0A540L9I8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD83157.1};","Predicted pyroglutamyl peptidase","GO:0005829,cytosol; GO:0016920,pyroglutamyl-peptidase activity; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0008242,omega peptidase activity; GO:0016787,hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF01470.20:Pyroglutamyl peptidase","--","--","--"]
["MS06G08820",17.8717,19.7563,20.2871,51.3298,33.8247,37.0429,44.2614,39.8753,44.4393,24.2262,23.8992,26.2268,33.6666,30.5644,30.2929,1286,1417,1430,2702,2127,2239,2418,2037,2889,1415,1472,1910,1901,1721,1709,0.548962459,"3.9157E-06","1.83759E-05",false,1.001398594,"6.35264E-16","6.87318E-15","up",1.292936056,"9.60755E-11","6.56656E-10","up",1.434359308,"1.44973E-32","4.24502E-31","up",0.898419249,"5.71021E-14","1.65514E-12",false,0.448344637,0.000500105,0.003729289,false,0.140548446,0.478614427,0.846966017,false,0.761114155,0.000134838,0.001172357,false,0.316023411,0.11211031,0.34615947,false,"chr_006",7612025,7616544,"-","MS06G08820","--","K24810 inhibitor of Bruton tyrosine kinase | (RefSeq) uncharacterized protein LOC103449318 isoform X2 (A)","--","ultraviolet-B receptor UVR8 [Pyrus x bretschneideri]","UVR8_ARATH RecName: Full=Ultraviolet-B receptor UVR8 {ECO:0000303|PubMed:12226503}; AltName: Full=Protein UV-B RESISTANCE 8 {ECO:0000303|PubMed:12226503}; AltName: Full=RCC1 domain-containing protein UVR8 {ECO:0000303|PubMed:12226503};","A0A540LKM1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD87010.1};","FOG: RCC1 domain","GO:0000785,chromatin; GO:0005829,cytosol; GO:0005634,nucleus; GO:0009536,plastid; GO:0003682,chromatin binding; GO:0005085,guanyl-nucleotide exchange factor activity; GO:0042802,identical protein binding; GO:0009881,photoreceptor activity; GO:0042803,protein homodimerization activity; GO:0009649,entrainment of circadian clock; GO:0009411,response to UV; GO:0010224,response to UV-B; GO:0003674,molecular_function; GO:0005488,binding; GO:0030234,enzyme regulator activity; GO:0030695,GTPase regulator activity; GO:0060589,nucleoside-triphosphatase regulator activity; GO:0098772,molecular function regulator activity; GO:0005515,protein binding; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0046983,protein dimerization activity; GO:0007623,circadian rhythm; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0042752,regulation of circadian rhythm; GO:0048511,rhythmic process; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0065007,biological regulation; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005694,chromosome; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005737,cytoplasm; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle","PF00415.21:Regulator of chromosome condensation (RCC1) repeat","--","--","--"]
["MS06G09630",6.5864,9.2241,8.3619,12.1569,10.0236,11.065,10.6131,10.8317,9.5476,14.0868,14.7647,14.2379,12.015,12.7751,11.6844,197,275,245,266,262,278,241,230,258,342,378,431,282,299,274,1.021408506,"8.55062E-09","6.10927E-08","up",0.887117897,"1.12857E-06","4.37749E-06",false,0.673677874,0.000862026,0.00204788,false,0.644064489,0.001622476,0.003636057,false,-0.366009392,0.024117994,0.063682443,false,-0.229101615,0.178395106,0.352149679,false,-0.031936052,0.861465055,0.968497758,false,-0.33112207,0.039060753,0.114618316,false,-0.188527272,0.255988347,0.545428934,false,"chr_006",8540248,8541650,"-","MS06G09630","--","K12946 signal peptidase complex subunit 1 [EC:3.4.-.-] | (RefSeq) probable signal peptidase complex subunit 1 (A)","ko03060: Protein export","hypothetical protein C1H46_017631 [Malus baccata]","SPCS1_ARATH RecName: Full=Signal peptidase complex subunit 1; AltName: Full=Microsomal signal peptidase 12 kDa subunit; Short=SPase 12 kDa subunit;","A0A540MDC3_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD96738.1};","Signal peptidase subunit","GO:0030176,integral component of endoplasmic reticulum membrane; GO:0005787,signal peptidase complex; GO:0045047,protein targeting to ER; GO:0006465,signal peptide processing; GO:0006605,protein targeting; GO:0006810,transport; GO:0006886,intracellular protein transport; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0033365,protein localization to organelle; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070727,cellular macromolecule localization; GO:0070972,protein localization to endoplasmic reticulum; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0072594,establishment of protein localization to organelle; GO:0072599,establishment of protein localization to endoplasmic reticulum; GO:0006508,proteolysis; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0010467,gene expression; GO:0016485,protein processing; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0051604,protein maturation; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0031090,organelle membrane; GO:0031224,intrinsic component of membrane; GO:0031227,intrinsic component of endoplasmic reticulum membrane; GO:0031300,intrinsic component of organelle membrane; GO:0031301,integral component of organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0098796,membrane protein complex; GO:0140534,endoplasmic reticulum protein-containing complex; GO:1902494,catalytic complex; GO:1905368,peptidase complex","PF06645.16:Microsomal signal peptidase 12 kDa subunit (SPC12)","--","--","--"]
["MS06G10150",2.6653,3.1391,1.4985,0.7393,1.9007,0.9657,1.0685,2.5029,2.2661,0.6662,0.1805,0.7252,0.8368,0.5924,1.5274,69,81,38,14,43,21,21,46,53,14,4,19,17,12,31,-2.017475021,0.000231439,0.000763737,"down",-1.02055039,0.029374794,0.049741632,"down",-0.789289496,0.113889498,0.16441199,false,-0.05049708,0.908347331,0.930843796,false,1.985885435,0.00077702,0.003483308,"up",0.988531406,0.049789307,0.143194709,false,0.73615311,0.163400149,0.618370931,false,1.252266064,0.063645884,0.165253425,false,0.259394627,0.651556021,0.850194416,false,"chr_006",9162991,9164097,"-","MS06G10150","--","--","--","hypothetical protein DVH24_025129 [Malus domestica]","BAG5_ARATH RecName: Full=BAG family molecular chaperone regulator 5, mitochondrial; AltName: Full=Bcl-2-associated athanogene 5; Flags: Precursor;","A0A498HJE9_MALDO RecName: Full=BAG domain-containing protein {ECO:0000259|PROSITE:PS51035};","--","GO:0005739,mitochondrion; GO:0005516,calmodulin binding; GO:0051087,chaperone binding; GO:0006457,protein folding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02179.19:BAG domain","--","--","--"]
["MS06G11260",3.642,3.9118,3.6304,4.1585,3.3831,3.9277,3.7813,1.9917,4.3158,4.8036,7.9592,7.4935,4.0952,4.9828,3.9349,85,91,83,71,69,77,67,33,91,91,159,177,75,91,72,1.037962708,"2.87999E-05",0.000114268,"up",0.510010052,0.031547458,0.053025509,false,0.246596827,0.31005945,0.388533057,false,0.133016532,0.67866727,0.741610699,false,-0.891129254,0.008635494,0.027267656,false,-0.360441188,0.272133902,0.465292646,false,-0.115984922,0.729612277,0.931927493,false,-0.774073118,0.004336429,0.020543762,false,-0.23814725,0.346184097,0.635114039,false,"chr_006",10304388,10306860,"-","MS06G11260","--","K16241 transcription factor HY5 | (RefSeq) transcription factor HY5-like isoform X1 (A)","ko04712: Circadian rhythm - plant","transcription factor HY5-like isoform X2 [Malus domestica]","HYH_ARATH RecName: Full=Transcription factor HY5-like; AltName: Full=HY5 homolog; AltName: Full=bZIP transcription factor 64 {ECO:0000303|PubMed:11906833}; Short=AtbZIP64 {ECO:0000303|PubMed:11906833};","A0A540L9L9_MALBA RecName: Full=BZIP domain-containing protein {ECO:0000259|PROSITE:PS50217};","Transcriptional activator FOSB/c-Fos and related bZIP transcription factors","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0000976,transcription cis-regulatory region binding; GO:0045944,positive regulation of transcription by RNA polymerase II; GO:0010017,red or far-red light signaling pathway; GO:0009585,red, far-red light phototransduction; GO:0010099,regulation of photomorphogenesis; GO:0010218,response to far red light; GO:0010114,response to red light; GO:0010224,response to UV-B; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006357,regulation of transcription by RNA polymerase II; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045893,positive regulation of DNA-templated transcription; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009639,response to red or far red light; GO:0023052,signaling; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071478,cellular response to radiation; GO:0071482,cellular response to light stimulus; GO:0071489,cellular response to red or far red light; GO:0104004,cellular response to environmental stimulus; GO:0007602,phototransduction; GO:0009581,detection of external stimulus; GO:0009582,detection of abiotic stimulus; GO:0009583,detection of light stimulus; GO:0009605,response to external stimulus; GO:0051606,detection of stimulus; GO:0007275,multicellular organism development; GO:0009640,photomorphogenesis; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048580,regulation of post-embryonic development; GO:0048583,regulation of response to stimulus; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:2000026,regulation of multicellular organismal development; GO:2000030,regulation of response to red or far red light; GO:0009411,response to UV; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00170.24:bZIP transcription factor","bZIP","TF","bZIP"]
["MS06G12260",19.3418,21.2291,18.2824,6.0638,7.3461,7.413,6.1333,6.1321,7.3193,6.6191,6.2769,6.1798,4.5294,6.6195,6.1851,702,768,650,161,233,226,169,158,240,195,195,227,129,188,176,-1.439510646,"4.37239E-20","1.05304E-18","down",-1.474983023,"1.49744E-15","1.57458E-14","down",-1.283405095,"1.91037E-13","1.75733E-12","down",-1.30639179,"2.23557E-15","2.1678E-14","down",0.146568261,0.414610722,0.566665042,false,0.18386525,0.388488169,0.584527681,false,-0.025200682,0.898269441,0.97614589,false,0.173413804,0.369681573,0.560195955,false,0.216916499,0.331777647,0.62279305,false,"chr_006",11644106,11646857,"-","MS06G12260","--","--","--","uncharacterized protein LOC103403519 [Malus domestica]","--","A0A498HQH9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH71845.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS06G13120",19.8477,33.7538,20.5909,10.4224,7.9399,6.4834,8.183,7.7281,11.2077,3.9262,5.5613,4.9426,5.6036,6.9597,4.6309,492,834,500,189,172,135,154,136,251,79,118,124,109,135,90,-2.181651071,"3.02086E-16","5.08947E-15","down",-1.818760102,"1.82565E-11","1.27601E-10","down",-1.362000316,"6.1142E-06","2.13028E-05","down",-1.17622223,"1.20785E-05","3.8944E-05","down",1.020134613,"1.56941E-05",0.000111368,"up",0.660828466,0.008180301,0.036448243,false,0.18664575,0.491731101,0.851480583,false,0.835935408,0.002532429,0.013354645,false,0.48194297,0.088738643,0.302664106,false,"chr_006",12860805,12862085,"+","MS06G13120","--","K07213 copper chaperone | (RefSeq) copper transport protein ATX1 (A)","--","putative copper-binding family protein [Malus domestica]","HIP23_ARATH RecName: Full=Heavy metal-associated isoprenylated plant protein 23 {ECO:0000303|PubMed:21072340, ECO:0000303|PubMed:23368984}; Short=AtHIP23 {ECO:0000303|PubMed:21072340, ECO:0000303|PubMed:23368984}; Flags: Precursor;","E4Z8N6_MALDO SubName: Full=Putative copper-binding family protein {ECO:0000313|EMBL:CBL94161.1};","Copper chaperone","GO:0046872,metal ion binding; GO:0050896,response to stimulus; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0008150,biological_process","PF00403.29:Heavy-metal-associated domain","--","--","--"]
["MS06G13370",1.7854,1.3543,1.8226,0.3572,0.4983,0.6739,0.2294,0.6747,0.723,0.7511,0.814,0.7314,0.3884,0.7234,1.333,41,31,41,6,10,13,4,11,15,14,16,17,7,13,24,-0.926682882,0.022017385,0.043593684,false,-0.733980177,0.137924278,0.194095449,false,-1.476656229,0.002062281,0.004548807,"down",-1.323397618,0.010100881,0.019206264,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_006",13198435,13199513,"+","MS06G13370","--","--","--","uncharacterized protein LOC114822196 [Malus domestica]","--","A0A498HKH4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH71976.1};","--","--","PF08813.14:Phage tail tube protein, TTP","--","--","--"]
["MS06G14120",3.7462,4.8584,6.7158,2.5605,2.5093,5.2212,1.5044,1.1583,1.1631,3.8836,6.6717,7.8995,5.8802,5.5464,3.9624,82,106,144,41,48,96,25,18,23,69,125,175,101,95,68,0.454492769,0.162392858,0.239751767,false,0.306807838,0.295379317,0.373368881,false,-0.367181098,0.325170911,0.404303203,false,-1.71418278,"1.46736E-06","5.40471E-06","down",-2.156775619,"6.14638E-09","8.7824E-08","down",-2.006748508,"3.54491E-09","1.11984E-07","down",-1.347504078,0.00129616,0.066189937,false,-0.804803808,0.037321697,0.110682305,false,-0.64820053,0.068767945,0.25912315,false,"chr_006",14243611,14244599,"-","MS06G14120","--","K19073 divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75] | (RefSeq) LOW QUALITY PROTEIN: divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic-like (A)","ko00860: Porphyrin metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic-like [Malus sylvestris]","DCVR_CUCSA RecName: Full=Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic; EC=1.3.1.75 {ECO:0000269|PubMed:23154534}; Flags: Precursor;","A0A5N5HC96_9ROSA RecName: Full=Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic {ECO:0000256|ARBA:ARBA00024089}; EC=1.3.1.75 {ECO:0000256|ARBA:ARBA00024059};","Predicted dehydrogenase","GO:0009507,chloroplast; GO:0051744,3,8-divinyl protochlorophyllide a 8-vinyl reductase activity; GO:0033728,divinyl chlorophyllide a 8-vinyl-reductase activity; GO:0015995,chlorophyll biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0016628,oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; GO:0006725,cellular aromatic compound metabolic process; GO:0006778,porphyrin-containing compound metabolic process; GO:0006779,porphyrin-containing compound biosynthetic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0015994,chlorophyll metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0033013,tetrapyrrole metabolic process; GO:0033014,tetrapyrrole biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042440,pigment metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046148,pigment biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13460.9:NAD(P)H-binding","--","--","--"]
["MS06G14910",10.9621,6.6956,13.6569,11.1871,9.7104,11.5044,9.5465,7.1889,7.1866,11.6821,17.1818,23.5724,16.6636,16.749,16.3701,363,221,443,271,281,320,240,169,215,314,487,790,433,434,425,0.927785332,0.003046194,0.007640955,false,0.965801379,"8.48289E-05",0.000243806,false,0.265841181,0.327521542,0.406769655,false,-0.096996829,0.734796793,0.789747276,false,-1.014313089,0.000300445,0.001521331,"down",-1.05088948,"2.40882E-08","6.36061E-07","down",-0.367526905,0.070559105,0.463553592,false,-0.644997846,0.013352342,0.050463712,false,-0.675329336,"4.56705E-06",0.000174848,false,"chr_006",15427991,15429406,"-","MS06G14910","--","K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) aspartyl protease family protein 2 (A)","--","gamma conglutin 1 [Malus domestica]","GIP2_NICBE RecName: Full=Probable aspartic proteinase GIP2 {ECO:0000305}; EC=3.4.23.- {ECO:0000305}; AltName: Full=Glucanase inhibitor protein 2 {ECO:0000303|PubMed:28082413}; Short=NbGIP2 {ECO:0000303|PubMed:28082413}; Flags: Precursor;","A0A540LV17_MALBA RecName: Full=Peptidase A1 domain-containing protein {ECO:0000259|PROSITE:PS51767};","Aspartyl protease","GO:0048046,apoplast; GO:0004190,aspartic-type endopeptidase activity; GO:0006952,defense response; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF14541.9:Xylanase inhibitor C-terminal","--","--","--"]
["MS06G15890",0.4771,0.5385,0.6088,0.0272,0.091,0,0.0786,0.168,0.044,0.3919,0.209,0.1179,0.1267,0.2286,0.0254,24,27,30,1,4,0,3,6,2,16,9,6,5,9,1,-0.997463649,0.075137892,0.125085902,false,-1.798529415,0.006328924,0.012598559,"down",-3.517548905,"4.84098E-05",0.000144831,"down",-2.234540988,0.000893235,0.002092584,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_006",17097280,17113144,"-","MS06G15890","--","K24221 type I inositol polyphosphate 5-phosphatase IP5P1/2 [EC:3.1.3.56] | (RefSeq) type I inositol polyphosphate 5-phosphatase 2 isoform X1 (A)","ko00562: Inositol phosphate metabolism; ko01100: Metabolic pathways","type IV inositol polyphosphate 5-phosphatase 7-like [Malus domestica]","IP5P7_ARATH RecName: Full=Type IV inositol polyphosphate 5-phosphatase 7 {ECO:0000303|PubMed:21677096}; Short=At5PTase7 {ECO:0000303|PubMed:21677096}; EC=3.1.3.36 {ECO:0000269|PubMed:19473324, ECO:0000269|PubMed:21677096, ECO:0000269|PubMed:23658066}; EC=3.1.3.86 {ECO:0000269|PubMed:19473324, ECO:0000269|PubMed:21677096, ECO:0000269|PubMed:23658066}; AltName: Full=Protein CVP2 LIKE 1 {ECO:0000303|PubMed:19473324}; Short=Protein CVL1 {ECO:0000303|PubMed:19473324};","A0A498HNW7_MALDO RecName: Full=IPPc domain-containing protein {ECO:0000259|SMART:SM00128};","Inositol polyphosphate 5-phosphatase and related proteins","GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0004445,inositol-polyphosphate 5-phosphatase activity; GO:0034485,phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity; GO:0004439,phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; GO:0071472,cellular response to salt stress; GO:0046855,inositol phosphate dephosphorylation; GO:0010305,leaf vascular tissue pattern formation; GO:0046856,phosphatidylinositol dephosphorylation; GO:2000377,regulation of reactive oxygen species metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0046030,inositol trisphosphate phosphatase activity; GO:0052745,inositol phosphate phosphatase activity; GO:0034594,phosphatidylinositol trisphosphate phosphatase activity; GO:0034595,phosphatidylinositol phosphate 5-phosphatase activity; GO:0052866,phosphatidylinositol phosphate phosphatase activity; GO:0034593,phosphatidylinositol bisphosphate phosphatase activity; GO:0106019,phosphatidylinositol-4,5-bisphosphate phosphatase activity; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009651,response to salt stress; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0062197,cellular response to chemical stress; GO:0070887,cellular response to chemical stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071470,cellular response to osmotic stress; GO:0104004,cellular response to environmental stimulus; GO:0005975,carbohydrate metabolic process; GO:0006066,alcohol metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0016311,dephosphorylation; GO:0019637,organophosphate metabolic process; GO:0019751,polyol metabolic process; GO:0043647,inositol phosphate metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044281,small molecule metabolic process; GO:0044282,small molecule catabolic process; GO:0046164,alcohol catabolic process; GO:0046174,polyol catabolic process; GO:0046434,organophosphate catabolic process; GO:0046838,phosphorylated carbohydrate dephosphorylation; GO:0071545,inositol phosphate catabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901616,organic hydroxy compound catabolic process; GO:0003002,regionalization; GO:0007275,multicellular organism development; GO:0007389,pattern specification process; GO:0010051,xylem and phloem pattern formation; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0006629,lipid metabolic process; GO:0006644,phospholipid metabolic process; GO:0006650,glycerophospholipid metabolic process; GO:0030258,lipid modification; GO:0044255,cellular lipid metabolic process; GO:0046486,glycerolipid metabolic process; GO:0046488,phosphatidylinositol metabolic process; GO:0046839,phospholipid dephosphorylation; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0072593,reactive oxygen species metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery","--","--","--","--"]
["MS06G17690",2.8893,2.9165,3.4759,0.9236,0.6816,0.9419,0.7846,0.7138,1.6335,1.0186,1.506,1.0892,0.7251,0.7953,0.9298,325,327,383,76,67,89,67,57,166,93,145,124,64,70,82,-1.178586656,"4.83649E-09","3.59736E-08","down",-1.628303865,"1.69537E-16","1.93943E-15","down",-1.656150155,"2.77002E-15","3.06038E-14","down",-1.290079395,"2.32342E-05","7.1429E-05","down",-0.099767281,0.779956366,0.86181113,false,0.355889899,0.312870156,0.509357326,false,0.364813017,0.316859405,0.756446625,false,-0.46196397,0.084015491,0.203563309,false,-0.002706747,0.991724796,0.997738757,false,"chr_006",21737422,21747275,"+","MS06G17690","--","K19704 protein phosphatase PTC1 [EC:3.1.3.16] | (RefSeq) putative protein phosphatase 2C-like protein 44 (A)","--","hypothetical protein DVH24_018572 [Malus domestica]","CIP7_ARATH RecName: Full=COP1-interacting protein 7 {ECO:0000303|PubMed:9668129};","A0A498HP85_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH71217.1};","--","GO:0005634,nucleus; GO:0009718,anthocyanin-containing compound biosynthetic process; GO:0015995,chlorophyll biosynthetic process; GO:0045893,positive regulation of DNA-templated transcription; GO:0009416,response to light stimulus; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0009813,flavonoid biosynthetic process; GO:0042440,pigment metabolic process; GO:0046148,pigment biosynthetic process; GO:0046283,anthocyanin-containing compound metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006778,porphyrin-containing compound metabolic process; GO:0006779,porphyrin-containing compound biosynthetic process; GO:0006807,nitrogen compound metabolic process; GO:0009987,cellular process; GO:0015994,chlorophyll metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0033013,tetrapyrrole metabolic process; GO:0033014,tetrapyrrole biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009314,response to radiation; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS06G18120",15.4064,10.9226,13.5082,26.1614,21.802,25.372,24.8702,25.1256,25.5414,19.2546,20.7991,19.1467,22.7529,23.5606,22.1616,900,636,773,1118,1113,1245,1103,1042,1348,913,1040,1132,1043,1077,1015,0.757342542,"5.59966E-06","2.55403E-05",false,1.073437689,"7.10425E-11","4.67658E-10","up",1.092742847,"1.6369E-09","9.56496E-09","up",1.206398598,"1.5274E-12","1.14258E-11","up",0.461495793,"6.92118E-05",0.000416444,false,0.147543683,0.215098867,0.399973086,false,0.112260324,0.389480078,0.800439903,false,0.351925661,0.007699176,0.032742548,false,0.043795601,0.736068848,0.892843041,false,"chr_006",22579866,22583539,"-","MS06G18120","--","--","--","hypothetical protein DVH24_018618 [Malus domestica]","--","A0A498HQY8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH71263.1};","--","--","PF12043.11:Domain of unknown function (DUF3527)","--","--","--"]
["MS06G19450",23.5442,22.4717,39.885,0.4349,0.9466,0.5303,0.0838,0.6274,0.5635,0.4704,0.8921,0.3772,0.1622,1.4637,0.8928,370,352,614,5,13,7,1,7,8,6,12,6,2,18,11,-5.454211056,"1.36384E-39","1.15151E-37","down",-4.799522313,"2.36383E-28","6.3186E-27","down",-5.244348447,"1.8691E-35","8.85105E-34","down",-5.78092944,"2.87209E-34","9.1975E-33","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_006",25871597,25872460,"+","MS06G19450","--","--","--","uncharacterized protein LOC114822219 [Malus domestica]","--","A0A5N5HLK5_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2626410.1};","--","--","--","--","--","--"]
["MS06G20930",0.7248,1.2119,1.4798,3.7648,1.9352,2.4159,3.3095,4.1517,5.7225,2.262,0.9596,0.4297,1.3546,0.6175,0.5547,15,25,30,57,35,42,52,61,107,38,17,9,22,10,9,0.300192344,0.645685881,0.728136231,false,-0.129705223,0.816287847,0.858147738,false,1.461386022,0.000933249,0.002201279,"up",2.23208583,"2.82226E-09","1.48122E-08","up",1.949479126,0.000498822,0.002368669,"up",2.380896298,"7.84064E-08","1.8737E-06","up",0.774218628,0.034405539,0.351005228,false,1.182054421,0.055582456,0.149641425,false,1.618066034,0.001380985,0.017252546,"up","chr_006",30244059,30244943,"+","MS06G20930","--","--","--","hypothetical protein DVH24_015427 [Malus domestica]","--","A0A498HMN2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH70805.1};","--","--","PF05553.14:Cotton fibre expressed protein","--","--","--"]
["MS06G23120",9.2457,10.0005,11.3925,17.7237,9.0508,11.6519,11.1317,10.3781,18.5887,5.9622,6.6667,5.3171,8.7908,7.1539,8.476,256,276,309,359,219,271,234,204,465,134,158,149,191,155,184,-0.586574815,0.001397477,0.003813893,false,-0.031795236,0.860896072,0.892847165,false,0.539710342,0.048890761,0.078318824,false,0.664689323,0.006107646,0.012173554,false,1.263378002,"1.78055E-06","1.5732E-05","up",0.714389414,0.005518983,0.026510472,false,0.125789054,0.693481421,0.921719177,false,1.139743642,"7.46365E-05",0.000710135,"up",0.594893297,0.032664427,0.161475403,false,"chr_006",38315793,38317161,"+","MS06G23120","--","--","--","hypothetical protein DVH24_015682 [Malus domestica]","--","A0A498HK18_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH71060.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS07G00020",2.4564,2.1884,1.986,0.9671,0.9894,0.6317,0.9836,1.2456,1.2833,1.1621,1.0102,0.7961,0.8264,0.6781,0.8021,125,111,99,36,44,27,38,45,59,48,44,41,33,27,32,-0.979185645,0.000482334,0.001477195,false,-1.232365928,"1.46565E-05","4.7809E-05","down",-1.139386667,0.000293561,0.000763202,"down",-0.636783741,0.017818666,0.032034404,false,0.354060737,0.281593165,0.430004056,false,0.611789881,0.064920385,0.173360742,false,0.499601916,0.164145425,0.61879347,false,-0.144763926,0.707231315,0.832863527,false,0.120216284,0.75271713,0.901127863,false,"chr_007",18619,22253,"+","MS07G00020","--","K12373 hexosaminidase [EC:3.2.1.52] | (RefSeq) beta-hexosaminidase 1-like (A)","ko00511: Other glycan degradation; ko00513: Various types of N-glycan biosynthesis; ko00520: Amino sugar and nucleotide sugar metabolism; ko00531: Glycosaminoglycan degradation; ko00600: Sphingolipid metabolism; ko00603: Glycosphingolipid biosynthesis - globo and isoglobo series; ko00604: Glycosphingolipid biosynthesis - ganglio series; ko01100: Metabolic pathways","hypothetical protein C1H46_006129 [Malus baccata]","HEXO2_ARATH RecName: Full=Beta-hexosaminidase 2; EC=3.2.1.52; AltName: Full=Beta-GlcNAcase 2; AltName: Full=Beta-N-acetylhexosaminidase 2; AltName: Full=Beta-hexosaminidase 3; Short=AtHEX3; AltName: Full=N-acetyl-beta-glucosaminidase 2; Flags: Precursor;","A0A540NBD0_MALBA RecName: Full=Beta-hexosaminidase {ECO:0000256|PIRNR:PIRNR001093}; EC=3.2.1.52 {ECO:0000256|PIRNR:PIRNR001093};","Beta-N-acetylhexosaminidase","GO:0016020,membrane; GO:0005886,plasma membrane; GO:0004563,beta-N-acetylhexosaminidase activity; GO:0015929,hexosaminidase activity; GO:0102148,N-acetyl-beta-D-galactosaminidase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0005975,carbohydrate metabolic process; GO:0030203,glycosaminoglycan metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006022,aminoglycan metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00728.25:Glycosyl hydrolase family 20, catalytic domain","--","--","--"]
["MS07G01080",6.2394,8.9472,10.638,5.1353,2.6167,5.6002,3.2702,1.5645,4.3028,4.2258,5.8011,4.8739,3.4969,5.2601,4.2917,191,273,319,115,70,144,76,34,119,105,152,151,84,126,103,-0.606947327,0.013175584,0.027936549,false,-0.690328606,0.00727245,0.014270004,false,-0.746564015,0.0221879,0.038887248,false,-1.216548064,0.000573801,0.001391092,"down",-0.596256759,0.094376064,0.189071618,false,-0.50899577,0.160998619,0.328608412,false,-0.470446088,0.256307137,0.710641986,false,-0.125163248,0.688395645,0.820547055,false,-0.033023019,0.918269839,0.972846374,false,"chr_007",1435597,1438341,"-","MS07G01080","--","--","--","hypothetical protein DVH24_006656 [Malus domestica]","ATAB2_ARATH RecName: Full=Protein TAB2 homolog, chloroplastic {ECO:0000305}; AltName: Full=Protein ATAB2 {ECO:0000303|PubMed:17139246}; Flags: Precursor;","A0A498KB08_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI05399.1};","--","GO:0009507,chloroplast; GO:0003723,RNA binding; GO:0009658,chloroplast organization; GO:0009704,de-etiolation; GO:0048564,photosystem I assembly; GO:0006412,translation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0007275,multicellular organism development; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009639,response to red or far red light; GO:0009640,photomorphogenesis; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0050896,response to stimulus; GO:0006091,generation of precursor metabolites and energy; GO:0008152,metabolic process; GO:0015979,photosynthesis; GO:0019684,photosynthesis, light reaction; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0065003,protein-containing complex assembly; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF20429.1:RNA-binding protein Tab2/Atab2, C terminal","--","--","--"]
["MS07G02120",0.0921,0.1231,0.1566,0.2307,0.6321,0.4018,0.5457,0.6484,0.2547,0.397,0.6095,0.3335,0.2346,0.2745,0.2544,6,8,10,11,36,22,27,30,15,21,34,22,12,14,13,2.030112909,0.000160409,0.000550169,"up","NA","NA","NA","NA",2.000917708,0.001154809,0.002675364,"up",2.2535308,0.000146285,0.00039292,"up",0.229595121,0.654835844,0.770813318,false,0.929524986,0.080348551,0.202006491,false,0.244896351,0.669501845,0.914514084,false,-0.012201449,0.981767626,0.990906455,false,0.696846639,0.205543449,0.485533776,false,"chr_007",3426285,3444703,"+","MS07G02120","--","K13418 somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) LOW QUALITY PROTEIN: somatic embryogenesis receptor kinase 2 (A)","--","probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Malus sylvestris]","Y3471_ARATH RecName: Full=Putative receptor-like protein kinase At3g47110; EC=2.7.11.1; Flags: Precursor;","A0A498JKP7_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF13855.9:Leucine rich repeat","--","--","--"]
["MS07G02990",0.3478,0.3053,0.3107,0.9212,0.5224,0.9058,1.0308,0.2756,0.5534,0.241,0.6096,0.494,0.3324,0.5834,0.8318,16,14,14,31,21,35,36,9,23,9,24,23,12,21,30,"NA","NA","NA","NA",1.144641604,0.023744637,0.041209551,"up",1.487715545,0.001060292,0.002473516,"up",1.234307151,0.032364029,0.054582192,false,0.586611326,0.337743435,0.490086842,false,0.103287608,0.859980278,0.924346859,false,-0.257557808,0.6351816,0.903573268,false,0.842313472,0.088322627,0.21102049,false,0.366056658,0.443083514,0.71770622,false,"chr_007",4874560,4879953,"+","MS07G02990","--","K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1-like (A)","ko04626: Plant-pathogen interaction","hypothetical protein C1H46_030466 [Malus baccata]","R13L1_ARATH RecName: Full=Putative disease resistance RPP13-like protein 1;","A0A540LC13_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD84016.1};","Apoptotic ATPase","GO:0043531,ADP binding; GO:0005524,ATP binding; GO:0006952,defense response; GO:0051707,response to other organism; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms","PF00931.25:NB-ARC domain","--","--","--"]
["MS07G03300",8.6935,6.9066,8.4692,32.8764,22.5724,33.6228,24.1224,24.1806,31.5053,25.3892,24.9531,30.9581,30.7616,38.4048,28.5935,197,156,188,545,447,640,415,389,645,467,484,710,547,681,508,1.944323181,"5.41133E-27","2.16681E-25","up",2.314267636,"2.51563E-35","1.00683E-33","up",2.095932523,"5.33225E-23","1.1551E-21","up",2.009460456,"1.11772E-27","2.44861E-26","up",0.079360768,0.654275316,0.770313119,false,-0.289068567,0.124696089,0.275880627,false,-0.08603507,0.672986928,0.914832275,false,0.168928437,0.398138939,0.587787084,false,-0.194412164,0.347213972,0.635882186,false,"chr_007",5454389,5456538,"-","MS07G03300","--","--","--","rust resistance kinase Lr10-like [Malus domestica]","AT21A_ARATH RecName: Full=Putative RING-H2 finger protein ATL21A; EC=2.3.2.27 {ECO:0000305}; AltName: Full=RING-type E3 ubiquitin transferase ATL21A {ECO:0000305}; Flags: Precursor;","A0A5N5HH36_9ROSA RecName: Full=Non-specific serine/threonine protein kinase {ECO:0000256|ARBA:ARBA00012513}; EC=2.7.11.1 {ECO:0000256|ARBA:ARBA00012513};","--","GO:0016021,integral component of membrane; GO:0046872,metal ion binding; GO:0030247,polysaccharide binding; GO:0016740,transferase activity; GO:0016567,protein ubiquitination; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0030246,carbohydrate binding; GO:0003824,catalytic activity; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF13947.9:Wall-associated receptor kinase galacturonan-binding","--","--","--"]
["MS07G04590",0.3899,1.3474,0.8403,7.8175,5.503,6.4472,7.5327,6.0417,7.5289,3.2025,3.0369,2.8253,4.1961,5.8135,3.3708,9,31,19,132,111,125,132,99,157,60,60,66,76,105,61,2.002991187,"4.65864E-06","2.15543E-05","up",2.669555679,"6.00405E-10","3.58483E-09","up",3.152002825,"1.33885E-14","1.38469E-13","up",3.316177041,"3.31871E-18","3.9715E-17","up",1.33021165,"2.24987E-08","2.89316E-07","up",0.66293879,0.015023213,0.058069798,false,0.165866627,0.476980886,0.846159379,false,1.166660092,"6.81452E-06","8.87765E-05","up",0.506894358,0.07812338,0.280060278,false,"chr_007",7753745,7756298,"-","MS07G04590","--","K00079 carbonyl reductase 1 [EC:1.1.1.184 1.1.1.189 1.1.1.197] | (RefSeq) (+)-neomenthol dehydrogenase-like (A)","ko00590: Arachidonic acid metabolism; ko00790: Folate biosynthesis; ko01100: Metabolic pathways","hypothetical protein C1H46_034539 [Malus baccata]","SDR1_ARATH RecName: Full=(+)-neomenthol dehydrogenase {ECO:0000303|PubMed:18599651}; EC=1.1.1.- {ECO:0000269|PubMed:21169366}; EC=1.1.1.208 {ECO:0000269|PubMed:18599651}; AltName: Full=Menthone:neomenthol reductase; AltName: Full=Short-chain dehydrogenase/reductase 1; Short=AtSDR1;","A0A540L095_MALBA RecName: Full=Short-chain dehydrogenase/reductase {ECO:0000256|RuleBase:RU369024}; EC=1.1.1.- {ECO:0000256|RuleBase:RU369024};","Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)","GO:0005737,cytoplasm; GO:0047501,(+)-neomenthol dehydrogenase activity; GO:0006952,defense response; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0016616,oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF00106.28:short chain dehydrogenase","--","--","--"]
["MS07G05400",7.8558,8.9714,10.6075,5.0266,2.9327,5.9364,4.3665,2.6291,6.3211,2.8486,5.8582,3.7434,2.3785,3.4888,3.6953,282,321,373,132,92,179,119,67,205,83,180,136,67,98,104,-0.961791594,0.000317668,0.001015184,false,-1.228364767,"4.47575E-08","2.10711E-07","down",-0.777027577,0.004507707,0.009266154,false,-0.763819924,0.010032599,0.019084968,false,0.208310323,0.576468154,0.708635727,false,0.48137896,0.15720121,0.323172802,false,0.013061781,0.971578761,0.992011845,false,0.198035333,0.569392912,0.736548273,false,0.47482456,0.127764281,0.373798855,false,"chr_007",9681157,9685488,"+","MS07G05400","--","K10664 E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase ATL6-like (A)","--","putative RING-H2 finger protein ATL61 [Malus domestica]","ATL38_ARATH RecName: Full=RING-H2 finger protein ATL38; EC=2.3.2.27 {ECO:0000305}; AltName: Full=RING-type E3 ubiquitin transferase ATL38 {ECO:0000305};","A0A498KED6_MALDO RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};","FOG: Predicted E3 ubiquitin ligase","GO:0016021,integral component of membrane; GO:0046872,metal ion binding; GO:0016740,transferase activity; GO:0016567,protein ubiquitination; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF13639.9:Ring finger domain","--","--","--"]
["MS07G07270",3.751,3.2158,2.4135,10.0686,10.9518,7.4426,10.66,17.196,13.3866,5.5734,3.0012,4.5823,7.9959,5.8104,7.104,165,141,104,324,421,275,356,537,532,199,113,204,276,200,245,0.681841996,0.029676154,0.056396144,false,1.44696435,"2.39188E-09","1.3245E-08","up",1.820794765,"3.4523E-11","2.48142E-10","up",2.416820571,"5.25639E-20","7.1536E-19","up",1.750958393,"6.35983E-09","9.04191E-08","up",0.985700502,"4.23234E-05",0.000470373,false,0.594099961,0.030374643,0.330679497,false,1.160073494,0.000187986,0.001548121,"up",0.40039049,0.109392962,0.341381909,false,"chr_007",13311154,13314157,"-","MS07G07270","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1-like (A)","ko04626: Plant-pathogen interaction","ser/thr protein kinase [Malus domestica]","PBL19_ARATH RecName: Full=Probable serine/threonine-protein kinase PBL19 {ECO:0000305}; EC=2.7.11.1 {ECO:0000305}; AltName: Full=PBS1-like protein 19 {ECO:0000303|PubMed:20413097};","A7UGD8_MALDO SubName: Full=Ser/thr protein kinase {ECO:0000313|EMBL:ABU49132.1};","Serine/threonine protein kinase","GO:0005886,plasma membrane; GO:0009536,plastid; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0045087,innate immune response; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0002376,immune system process; GO:0006950,response to stress; GO:0006952,defense response; GO:0006955,immune response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["MS07G09220",1.0624,1.2879,0.5423,0,0,0.0527,0,0,0.098,0.3817,0.4137,0.2624,0.0564,0.1131,0.1129,24,29,12,0,0,1,0,0,2,7,8,6,1,2,2,-1.28121155,0.03888904,0.071136492,false,-3.07293399,0.000524951,0.001304845,"down",-5.419185601,"7.42467E-05",0.000215358,"down",-4.465727287,0.000347919,0.000875757,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_007",21279388,21281611,"-","MS07G09220","--","K08850 aurora kinase, other [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase Aurora-3 (A)","--","serine/threonine-protein kinase Aurora-3 [Malus domestica]","AUR3_ARATH RecName: Full=Serine/threonine-protein kinase Aurora-3; Short=AtAur3; EC=2.7.11.1; AltName: Full=Aurora-like kinase 3;","A0A498KME1_MALDO RecName: Full=Aurora kinase {ECO:0000256|RuleBase:RU367134}; EC=2.7.11.1 {ECO:0000256|RuleBase:RU367134};","Serine/threonine protein kinase","GO:0032133,chromosome passenger complex; GO:0000775,chromosome, centromeric region; GO:0005634,nucleus; GO:0048471,perinuclear region of cytoplasm; GO:0005819,spindle; GO:0005876,spindle microtubule; GO:0051233,spindle midzone; GO:0005524,ATP binding; GO:0035175,histone kinase activity (H3-S10 specific); GO:0044022,histone kinase activity (H3-S28 specific); GO:0035174,histone serine kinase activity; GO:0106310,protein serine kinase activity; GO:0007059,chromosome segregation; GO:0043987,NA; GO:0043988,NA; GO:0016572,NA; GO:0007052,mitotic spindle organization; GO:0016310,phosphorylation; GO:0032465,regulation of cytokinesis; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0035173,histone kinase activity; GO:0140096,catalytic activity, acting on a protein; GO:0008150,biological_process; GO:0009987,cellular process; GO:0000226,microtubule cytoskeleton organization; GO:0000278,mitotic cell cycle; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0007017,microtubule-based process; GO:0007049,cell cycle; GO:0007051,spindle organization; GO:0016043,cellular component organization; GO:0022402,cell cycle process; GO:0071840,cellular component organization or biogenesis; GO:1902850,microtubule cytoskeleton organization involved in mitosis; GO:1903047,mitotic cell cycle process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008152,metabolic process; GO:0044237,cellular metabolic process; GO:0000910,cytokinesis; GO:0010564,regulation of cell cycle process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051301,cell division; GO:0051302,regulation of cell division; GO:0051726,regulation of cell cycle; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005856,cytoskeleton; GO:0005875,microtubule associated complex; GO:0015630,microtubule cytoskeleton; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005694,chromosome; GO:0098687,chromosomal region; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005737,cytoplasm; GO:0005874,microtubule; GO:0099080,supramolecular complex; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber","PF00069.28:Protein kinase domain","--","--","--"]
["MS07G10240",4.3464,4.213,4.3202,7.1252,5.7215,5.6412,5.9187,5.9612,8.2472,3.0196,3.5507,3.0837,5.1224,3.4663,3.6472,266,257,259,319,306,290,275,259,456,150,186,191,246,166,175,-0.231880753,0.151998169,0.226624516,false,0.222187877,0.297459478,0.375552921,false,0.736178166,"6.27458E-05",0.000184187,false,0.923363671,"4.17502E-07","1.66252E-06",false,1.168247668,"3.74445E-09","5.53696E-08","up",0.717308037,0.002525111,0.014171041,false,0.185734505,0.383346034,0.798079941,false,0.984678336,"7.17604E-07","1.2316E-05",false,0.540365598,0.023535246,0.129640292,false,"chr_007",23655249,23659446,"-","MS07G10240","--","K00511 squalene monooxygenase [EC:1.14.14.17] | (RefSeq) squalene epoxidase 3-like (A)","ko00100: Steroid biosynthesis; ko00909: Sesquiterpenoid and triterpenoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","squalene epoxidase 3-like [Malus domestica]","SQE1_PANGI RecName: Full=Squalene monooxygenase SE1 {ECO:0000303|Ref.1}; EC=1.14.14.17 {ECO:0000250|UniProtKB:Q9SM02}; AltName: Full=Squalene epoxidase 1 {ECO:0000303|PubMed:19857882, ECO:0000303|PubMed:29509695, ECO:0000303|Ref.1, ECO:0000303|Ref.2}; Short=PgSQE1 {ECO:0000303|PubMed:19857882, ECO:0000303|PubMed:29509695}; Short=SE {ECO:0000303|Ref.1, ECO:0000303|Ref.2}; Short=SE1 {ECO:0000303|PubMed:19857882}; Short=gse {ECO:0000303|PubMed:15493471};","A0A498KMV5_MALDO RecName: Full=Squalene monooxygenase {ECO:0000256|ARBA:ARBA00012312}; EC=1.14.14.17 {ECO:0000256|ARBA:ARBA00012312};","Squalene monooxygenase","GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0050660,flavin adenine dinucleotide binding; GO:0004506,squalene monooxygenase activity; GO:0009723,response to ethylene; GO:0042542,response to hydrogen peroxide; GO:0009753,response to jasmonic acid; GO:0010038,response to metal ion; GO:0002238,response to molecule of fungal origin; GO:0071731,response to nitric oxide; GO:0009751,response to salicylic acid; GO:1902438,response to vanadate(3-); GO:0016126,sterol biosynthetic process; GO:0046246,terpene biosynthetic process; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004497,monooxygenase activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0000302,response to reactive oxygen species; GO:0006950,response to stress; GO:0006979,response to oxidative stress; GO:0010035,response to inorganic substance; GO:1901700,response to oxygen-containing compound; GO:0033993,response to lipid; GO:0070542,response to fatty acid; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:1901698,response to nitrogen compound; GO:0014070,response to organic cyclic compound; GO:0006629,lipid metabolic process; GO:0006694,steroid biosynthetic process; GO:0008152,metabolic process; GO:0008202,steroid metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0016125,sterol metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0006720,isoprenoid metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0009987,cellular process; GO:0042214,terpene metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0120251,hydrocarbon biosynthetic process; GO:0120252,hydrocarbon metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF08491.13:Squalene epoxidase","--","--","--"]
["MS07G10980",1.6123,1.6879,2.1826,1.4853,0.9626,1.0015,0.5078,0.5925,0.4656,1.8568,1.9656,1.4546,1.206,0.9854,1.1177,46,48,61,31,24,24,11,12,12,43,48,42,27,22,25,0.129340945,0.67819628,0.755879092,false,-0.432094356,0.209065888,0.278017716,false,-0.458254148,0.210880713,0.279815258,false,-1.529113267,0.000269694,0.000691523,"down",-1.6480268,0.000122344,0.00068845,"down",-1.080537521,0.020900733,0.074862281,false,-1.072357825,0.026233114,0.31125896,false,-0.57275916,0.134095645,0.283501384,false,-0.000461667,0.999094655,0.999730311,false,"chr_007",24985157,24986376,"+","MS07G10980","--","--","--","probable membrane-associated kinase regulator 1 [Malus sylvestris]","--","A0A540N872_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE07237.1};","--","--","--","--","--","--"]
["MS07G11730",18.266,27.2233,26.8383,3.4639,4.9536,12.5697,1.8079,1.0411,2.5711,13.7882,28.2477,23.3686,13.5897,17.0011,9.6963,173,257,249,24,41,100,13,7,22,106,229,224,101,126,72,0.033233664,0.907189378,0.933178547,false,-0.54861452,0.043769444,0.070769547,false,-1.586674919,0.000264542,0.000692778,"down",-3.43410489,"1.38493E-21","2.09784E-20","down",-3.459634589,"2.67468E-17","1.1323E-15","down",-2.873228179,"1.86012E-12","1.15121E-10","down",-1.86148182,0.00140499,0.069309484,false,-1.605110015,0.000552487,0.003818711,"down",-1.013255081,0.027996456,0.145798041,false,"chr_007",26083884,26084288,"-","MS07G11730","--","--","--","protein RALF-like 34 [Malus domestica]","RLF34_ARATH RecName: Full=Protein RALF-like 34; Flags: Precursor;","A0A650F6F5_9ROSA SubName: Full=Rapid alkalinization factor 20 {ECO:0000313|EMBL:QGT52215.1};","--","GO:0048046,apoplast; GO:0005179,hormone activity; GO:0019722,calcium-mediated signaling; GO:0007267,cell-cell signaling; GO:0003674,molecular_function; GO:0005102,signaling receptor binding; GO:0005488,binding; GO:0005515,protein binding; GO:0030545,signaling receptor regulator activity; GO:0030546,signaling receptor activator activity; GO:0048018,receptor ligand activity; GO:0098772,molecular function regulator activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0019932,second-messenger-mediated signaling; GO:0023052,signaling; GO:0035556,intracellular signal transduction; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF05498.14:Rapid ALkalinization Factor (RALF)","--","--","--"]
["MS07G12840",4.4626,2.7398,3.2977,1.3202,6.7072,1.1498,2.3688,7.8811,3.76,9.9701,2.7625,2.2376,6.9602,2.9792,8.0283,134,82,97,29,176,29,54,168,102,243,71,68,164,70,189,0.727273299,0.181518433,0.262506176,false,1.067396889,0.004249893,0.008787034,"up",0.057294029,0.928872628,0.944151874,false,0.7031721,0.107600887,0.157396321,false,-0.007185877,0.990782664,0.995091936,false,-0.34841388,0.466774726,0.654094439,false,0.637391827,0.362089309,0.786589193,false,-0.646623091,0.539113765,0.713032774,false,-0.976772961,0.135593061,0.386349315,false,"chr_007",28645026,28646309,"-","MS07G12840","--","K20893 probable galacturonosyltransferase-like 1 [EC:2.4.1.-] | (RefSeq) probable galacturonosyltransferase-like 1 (A)","--","probable galacturonosyltransferase-like 1 [Malus sylvestris]","GATL1_ARATH RecName: Full=Probable galacturonosyltransferase-like 1; EC=2.4.1.-; AltName: Full=Protein GAOLAOZHUANGREN 1; AltName: Full=Protein PARVUS;","A0A540NDM1_MALBA RecName: Full=Hexosyltransferase {ECO:0000256|RuleBase:RU362027}; EC=2.4.1.- {ECO:0000256|RuleBase:RU362027};","--","GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0005794,Golgi apparatus; GO:0016021,integral component of membrane; GO:0047262,polygalacturonate 4-alpha-galacturonosyltransferase activity; GO:0052386,cell wall thickening; GO:0010417,glucuronoxylan biosynthetic process; GO:0048366,leaf development; GO:0032504,multicellular organism reproduction; GO:0045489,pectin biosynthetic process; GO:0010051,xylem and phloem pattern formation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0042545,cell wall modification; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071840,cellular component organization or biogenesis; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010410,hemicellulose metabolic process; GO:0010413,glucuronoxylan metabolic process; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0042546,cell wall biogenesis; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044038,cell wall macromolecule biosynthetic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0045491,xylan metabolic process; GO:0045492,xylan biosynthetic process; GO:0070589,cellular component macromolecule biosynthetic process; GO:0070592,cell wall polysaccharide biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:0000003,reproduction; GO:0010393,galacturonan metabolic process; GO:0045488,pectin metabolic process; GO:0003002,regionalization; GO:0007389,pattern specification process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment; GO:0031224,intrinsic component of membrane","PF01501.23:Glycosyl transferase family 8","--","--","--"]
["MS07G13650",2.7787,2.6329,3.467,0,0.6183,0.1838,0,0,0,0,0.5411,0.1525,0,0.4932,0,36,34,44,0,7,2,0,0,0,0,6,2,0,5,0,-3.505335599,"1.08122E-06","5.56735E-06","down",-3.880443666,"4.03587E-06","1.4397E-05","down",-3.184008031,"1.71797E-05","5.55366E-05","down",-7.071143067,"2.85011E-08","1.32032E-07","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_007",29623546,29624850,"-","MS07G13650","--","--","--","protein RADIALIS-like 4 [Malus domestica]","RADL3_ARATH RecName: Full=Protein RADIALIS-like 3; Short=AtRL3; Short=Protein RAD-like 3;","A0A540LX12_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD90802.1};","Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","MYB-related","TF","MYB->MYB-related"]
["MS07G14470",44.2954,46.3874,47.0783,97.6412,76.1958,94.4806,97.3364,74.2119,84.3683,78.4904,87.1461,85.4025,89.4378,88.1573,83.8605,1848,1929,1924,2980,2778,3311,3083,2198,3180,2658,3112,3606,2928,2878,2743,1.051691581,"9.84123E-29","4.50183E-27","up",1.217837803,"1.47332E-30","4.4451E-29","up",1.173599145,"1.07244E-17","1.47207E-16","up",1.178033663,"6.23853E-15","5.84556E-14","up",0.138475952,0.351362821,0.504208754,false,-0.025166708,0.86836617,0.929444569,false,0.002268738,0.989259502,0.996969225,false,0.138544543,0.303356431,0.493463832,false,-0.019428562,0.887920097,0.959347639,false,"chr_007",30466178,30469547,"-","MS07G14470","--","K01285 lysosomal Pro-X carboxypeptidase [EC:3.4.16.2] | (RefSeq) lysosomal Pro-X carboxypeptidase-like (A)","--","hypothetical protein C1H46_039711 [Malus baccata]","EDA2_ARATH RecName: Full=Probable serine protease EDA2; EC=3.4.-.-; AltName: Full=Protein EMBRYO SAC DEVELOPMENT ARREST 2; Flags: Precursor;","A0A540KL61_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD74762.1};","Hydrolytic enzymes of the alpha/beta hydrolase fold","GO:0005576,extracellular region; GO:0008239,dipeptidyl-peptidase activity; GO:0008236,serine-type peptidase activity; GO:0009561,megagametogenesis; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008233,peptidase activity; GO:0008238,exopeptidase activity; GO:0016787,hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0017171,serine hydrolase activity; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009553,embryo sac development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF05577.15:Serine carboxypeptidase S28","--","--","--"]
["MS07G15390",50.3256,51.9275,52.4198,112.5859,91.2296,110.8802,120.7072,99.7347,120.035,54.0373,64.2379,58.4638,79.7423,73.2109,66.3607,3932,4044,4012,6435,6229,7277,7160,5532,8473,3427,4296,4623,4889,4476,4065,0.376942006,0.000126513,0.000443222,false,0.798171126,"2.94283E-10","1.81466E-09",false,1.236784638,"4.1799E-23","9.14786E-22","up",1.420563231,"1.20438E-29","2.96855E-28","up",1.055934894,"8.97686E-16","3.11732E-14","up",0.637781437,"1.94111E-05",0.000241748,false,0.182244075,0.204224982,0.662046285,false,0.876135447,"2.93494E-11","1.32412E-09",false,0.463780572,0.001716536,0.020109449,false,"chr_007",31600622,31606453,"+","MS07G15390","--","K01681 aconitate hydratase [EC:4.2.1.3] | (RefSeq) aconitate hydratase 1-like (A)","ko00020: Citrate cycle (TCA cycle); ko00630: Glyoxylate and dicarboxylate metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01200: Carbon metabolism; ko01210: 2-Oxocarboxylic acid metabolism; ko01230: Biosynthesis of amino acids","aconitate hydratase 1-like [Malus domestica]","ACO1_ARATH RecName: Full=Aconitate hydratase 1 {ECO:0000303|PubMed:25061985}; Short=Aconitase 1 {ECO:0000303|PubMed:25061985}; EC=4.2.1.3 {ECO:0000250|UniProtKB:P19414}; AltName: Full=Citrate hydro-lyase 1 {ECO:0000303|PubMed:25061985};","A0A540LHG8_MALBA RecName: Full=Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275}; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};","RNA-binding translational regulator IRP (aconitase superfamily)","GO:0048046,apoplast; GO:0005829,cytosol; GO:0005739,mitochondrion; GO:0000325,plant-type vacuole; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0051539,4 iron, 4 sulfur cluster binding; GO:0003994,aconitate hydratase activity; GO:0047780,citrate dehydratase activity; GO:0005507,copper ion binding; GO:0030350,iron-responsive element binding; GO:0048027,mRNA 5'-UTR binding; GO:0006101,citrate metabolic process; GO:0006102,isocitrate metabolic process; GO:1990641,response to iron ion starvation; GO:0006099,tricarboxylic acid cycle; GO:0003674,molecular_function; GO:0005488,binding; GO:0051536,iron-sulfur cluster binding; GO:0051540,metal cluster binding; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016835,carbon-oxygen lyase activity; GO:0016836,hydro-lyase activity; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0003729,mRNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006082,organic acid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0072350,tricarboxylic acid metabolic process; GO:0006066,alcohol metabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:1902652,secondary alcohol metabolic process; GO:0006950,response to stress; GO:0009605,response to external stimulus; GO:0009991,response to extracellular stimulus; GO:0031667,response to nutrient levels; GO:0042594,response to starvation; GO:0050896,response to stimulus; GO:0006091,generation of precursor metabolites and energy; GO:0009060,aerobic respiration; GO:0015980,energy derivation by oxidation of organic compounds; GO:0044238,primary metabolic process; GO:0045333,cellular respiration; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005773,vacuole; GO:0016020,membrane; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF00330.23:Aconitase family (aconitate hydratase)","--","--","--"]
["MS07G16030",74.8252,92.5963,81.0141,46.2543,36.2916,64.6115,35.7627,25.9198,35.6834,54.1138,73.2896,62.8168,52.6413,84.9602,60.2144,2574,3175,2730,1164,1091,1867,934,633,1109,1511,2158,2187,1421,2287,1624,-0.20350726,0.177328257,0.257727222,false,-0.039291075,0.84232397,0.878211193,false,-0.552820432,0.011021403,0.020813076,false,-1.070762043,"1.70886E-09","9.21154E-09","down",-0.855000433,"2.99851E-06","2.52897E-05",false,-1.016619188,"5.25315E-06","7.68796E-05","down",-0.518638591,0.02594322,0.309969776,false,-0.334097733,0.127728566,0.274084518,false,-0.489605857,0.050769418,0.213961795,false,"chr_007",32159694,32161979,"+","MS07G16030","--","K25507 high mobility group B protein, plant | (RefSeq) high mobility group B protein 3-like (A)","--","hypothetical protein DVH24_018385 [Malus domestica]","HMGB3_ARATH RecName: Full=High mobility group B protein 3; AltName: Full=High mobility group protein B 2; Short=AtHMGbeta2; Short=HMG beta 2; AltName: Full=Nucleosome/chromatin assembly factor group D 03; Short=Nucleosome/chromatin assembly factor group D 3;","M5W3F5_PRUPE RecName: Full=HMG box domain-containing protein {ECO:0000259|PROSITE:PS50118};","HMG box-containing protein","GO:0000785,chromatin; GO:0005829,cytosol; GO:0005634,nucleus; GO:0003682,chromatin binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0030527,structural constituent of chromatin; GO:0006325,chromatin organization; GO:0003674,molecular_function; GO:0005488,binding; GO:0003676,nucleic acid binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0005198,structural molecule activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005694,chromosome; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005737,cytoplasm; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle","PF00505.22:HMG (high mobility group) box","HMG","TR","HMG"]
["MS07G16390",9.936,10.4873,10.4951,15.3205,15.8832,15.2927,17.1188,16.6675,17.8446,11.7099,12.565,13.5869,13.7607,12.6701,12.5357,461,485,477,520,644,596,603,549,748,441,499,638,501,460,456,0.479310062,0.000227537,0.000752035,false,0.627465347,"3.76715E-06","1.35021E-05",false,0.805223347,"6.34328E-09","3.43588E-08",false,1.022792061,"1.83728E-15","1.7921E-14","up",0.55657622,"1.97736E-05",0.000137031,false,0.410887019,0.002948944,0.0160642,false,0.215095286,0.12981635,0.578681146,false,0.344124376,0.018144422,0.06407087,false,0.203868932,0.174443787,0.444510488,false,"chr_007",32508061,32512701,"-","MS07G16390","--","--","--","hypothetical protein C1H46_025364 [Malus baccata]","ARID3_ARATH RecName: Full=AT-rich interactive domain-containing protein 3; Short=ARID domain-containing protein 3;","A0A540LRF9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD89076.1};","DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain","GO:0005634,nucleus; GO:0032991,protein-containing complex; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0006357,regulation of transcription by RNA polymerase II; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF01388.24:ARID/BRIGHT DNA binding domain","ARID","TR","ARID"]
["MS07G17250",25.3956,23.3359,14.3407,4.27,9.5724,4.286,4.6724,9.4216,6.7979,11.4146,6.7628,6.7832,6.9719,6.3375,8.8464,1439,1318,796,177,474,204,201,379,348,525,328,389,310,281,393,-1.143668582,0.000215005,0.000715416,"down",-1.223913282,"1.12212E-06","4.35477E-06","down",-1.570755644,"4.42984E-05",0.000133509,"down",-1.315680413,"2.56533E-05","7.83156E-05","down",-0.156273771,0.643083593,0.762290009,false,-0.075817233,0.786758145,0.881598564,false,0.250453057,0.542325256,0.871563684,false,-0.405344345,0.316214012,0.507319382,false,-0.317584413,0.381961724,0.66672555,false,"chr_007",33543844,33547732,"-","MS07G17250","--","K23877 xyloglucan O-acetyltransferase | (RefSeq) protein ALTERED XYLOGLUCAN 4-like (A)","--","hypothetical protein DVH24_018231 [Malus domestica]","TBL16_ARATH RecName: Full=Protein trichome birefringence-like 16;","A0A498KDD3_MALDO RecName: Full=PMR5N domain-containing protein {ECO:0000259|Pfam:PF14416};","--","GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0000138,Golgi trans cisterna; GO:0016021,integral component of membrane; GO:0005802,trans-Golgi network; GO:0016413,O-acetyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008374,O-acyltransferase activity; GO:0016407,acetyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity; GO:0005795,Golgi stack; GO:0031984,organelle subcompartment; GO:0031985,Golgi cisterna; GO:0098791,Golgi apparatus subcompartment; GO:0016020,membrane; GO:0031224,intrinsic component of membrane","PF13839.9:GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p","--","--","--"]
["MS07G17970",24.5294,23.7044,23.8733,48.8545,47.4393,39.1534,54.4151,52.18,45.0493,39.8235,37.5954,41.9648,46.0373,36.7397,43.9413,1523,1467,1452,2219,2574,2042,2565,2300,2527,2007,1998,2637,2243,1785,2139,0.915596254,"1.58971E-14","2.26507E-13",false,1.107018486,"4.80632E-15","4.83529E-14","up",1.129073661,"8.12481E-12","6.25822E-11","up",1.359531448,"3.02672E-19","3.92182E-18","up",0.456403089,0.003196164,0.0117986,false,0.266935161,0.114195533,0.259900731,false,0.22677548,0.235763108,0.692375237,false,0.232000723,0.179764724,0.346481615,false,0.04816183,0.796185176,0.921634687,false,"chr_007",34357655,34362003,"-","MS07G17970","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1-like (A)","ko04626: Plant-pathogen interaction","hypothetical protein DVH24_018150 [Malus domestica]","PUB34_ARATH RecName: Full=U-box domain-containing protein 34; AltName: Full=Plant U-box protein 34; Includes: RecName: Full=E3 ubiquitin ligase; EC=2.3.2.27; AltName: Full=RING-type E3 ubiquitin transferase {ECO:0000305}; Includes: RecName: Full=Serine/threonine-protein kinase; EC=2.7.11.-;","A0A498KER7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI06108.1};","--","GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004842,ubiquitin-protein transferase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0019787,ubiquitin-like protein transferase activity; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["MS07G18850",1.4115,1.0679,1.3228,2.3723,2.4095,2.3966,4.0232,3.2594,2.7149,0.9122,1.5409,1.8976,2.7129,1.7742,2.4496,61,46,56,75,91,87,132,100,106,32,57,83,92,60,83,0.380231035,0.267342531,0.360922798,false,1.162226576,"6.45584E-05",0.000189135,"up",1.132613224,"1.65553E-05","5.3693E-05","up",1.681153852,"3.99434E-09","2.05484E-08","up",1.313108115,"7.89825E-05",0.000467979,"up",0.532994253,0.063656402,0.1710422,false,0.543727974,0.03861609,0.366407569,false,0.769349727,0.016487694,0.059561743,false,-0.003585337,0.989423329,0.997629532,false,"chr_007",35318411,35326681,"+","MS07G18850","--","K02934 large subunit ribosomal protein L6e | (RefSeq) 60S ribosomal protein L6-like isoform X2 (A)","ko03010: Ribosome","hypothetical protein C1H46_033276 [Malus baccata]","Y4291_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g29180; EC=2.7.11.1; Flags: Precursor;","A0A540L3W0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD81166.1};","--","GO:0016021,integral component of membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF12819.10:Malectin-like domain","--","--","--"]
["MS07G19540",2.644,4.2339,4.931,0.139,2.851,5.811,0.6028,1.7905,0.6754,2.8815,22.6325,11.3541,1.2311,4.1586,2.0104,52,83,95,2,49,96,9,25,12,46,381,226,19,64,31,1.803159873,0.001294861,0.003561801,"up",-0.383329086,0.39623336,0.477656712,false,-0.226578064,0.779726234,0.824778068,false,-1.664175934,0.0008093,0.001911606,"down",-3.451706439,"2.33616E-07","2.49759E-06","down",-1.261762882,0.039066156,0.12026401,false,-1.424501634,0.123967889,0.569833851,false,-2.020828522,0.121220476,0.264329955,false,0.183741647,0.831188997,0.937389014,false,"chr_007",36184771,36185611,"+","MS07G19540","--","--","--","lachrymatory-factor synthase-like [Malus domestica]","LFS_ALLCE RecName: Full=Lachrymatory-factor synthase; Flags: Precursor;","A0A498KJM6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI05965.1};","--","GO:0005773,vacuole; GO:0043086,negative regulation of catalytic activity; GO:0008150,biological_process; GO:0044092,negative regulation of molecular function; GO:0050790,regulation of catalytic activity; GO:0065007,biological regulation; GO:0065009,regulation of molecular function; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF10604.12:Polyketide cyclase / dehydrase and lipid transport","--","--","--"]
["MS07G20440",43.0291,35.1798,40.1003,71.8093,57.432,76.4801,67.8714,53.7297,65.1081,63.8936,76.9303,77.097,72.658,88.7685,73.5755,643,524,587,785,750,960,770,570,879,775,984,1166,852,1038,862,1.065357671,"1.18583E-13","1.52558E-12","up",1.28137301,"7.63951E-17","9.00791E-16","up",1.007709249,"1.33259E-09","7.8982E-09","up",0.940770541,"1.16727E-08","5.69375E-08",false,-0.112086279,0.464074059,0.612939402,false,-0.325917156,0.046548915,0.136320551,false,-0.068427384,0.682370732,0.917735444,false,-0.041141714,0.788403608,0.884361625,false,-0.249283086,0.12512828,0.36843793,false,"chr_007",37262912,37299030,"-","MS07G20440","--","--","--","protein LIKE COV 1 [Pyrus x bretschneideri]","COV1_ARATH RecName: Full=Protein CONTINUOUS VASCULAR RING 1 {ECO:0000303|PubMed:12668628};","A0A5N5I9A8_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2634270.1};","--","GO:0005794,Golgi apparatus; GO:0016021,integral component of membrane; GO:0010222,stem vascular tissue pattern formation; GO:0003002,regionalization; GO:0007275,multicellular organism development; GO:0007389,pattern specification process; GO:0008150,biological_process; GO:0010051,xylem and phloem pattern formation; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane","PF04367.16:Protein of unknown function (DUF502)","--","--","--"]
["MS07G21400",6.3276,6.4484,7.7514,3.8696,3.2012,2.8943,3.8164,6.0515,2.9121,4.185,2.1399,3.1919,2.4191,2.8941,2.7611,190,193,228,85,84,73,87,129,79,102,55,97,57,68,65,-0.910949095,0.001764851,0.004698902,false,-1.052659858,"9.35934E-07","3.67522E-06","down",-0.826795434,0.000346146,0.000886831,false,-0.393370452,0.203358785,0.271890206,false,0.53147495,0.178727995,0.307509712,false,0.67285978,0.045950661,0.135031606,false,0.429335073,0.224130921,0.682490534,false,0.105125776,0.759533031,0.866803255,false,0.251949158,0.347518128,0.636043443,false,"chr_007",38319084,38322026,"-","MS07G21400","--","--","--","SPX domain-containing protein 1-like [Malus sylvestris]","SPX1_ARATH RecName: Full=SPX domain-containing protein 1 {ECO:0000303|PubMed:18315545}; AltName: Full=Protein SPX DOMAIN GENE 1 {ECO:0000303|PubMed:18315545}; Short=AtSPX1 {ECO:0000303|PubMed:18315545};","A0A540MU58_MALBA RecName: Full=SPX domain-containing protein {ECO:0000259|PROSITE:PS51382};","Protein involved in vacuolar polyphosphate accumulation, contains SPX domain","GO:0005634,nucleus; GO:0071456,cellular response to hypoxia; GO:0016036,cellular response to phosphate starvation; GO:0080040,positive regulation of cellular response to phosphate starvation; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0007154,cell communication; GO:0009267,cellular response to starvation; GO:0009605,response to external stimulus; GO:0009991,response to extracellular stimulus; GO:0031667,response to nutrient levels; GO:0031668,cellular response to extracellular stimulus; GO:0031669,cellular response to nutrient levels; GO:0042594,response to starvation; GO:0071496,cellular response to external stimulus; GO:0010646,regulation of cell communication; GO:0010647,positive regulation of cell communication; GO:0032101,regulation of response to external stimulus; GO:0032103,positive regulation of response to external stimulus; GO:0032104,regulation of response to extracellular stimulus; GO:0032106,positive regulation of response to extracellular stimulus; GO:0032107,regulation of response to nutrient levels; GO:0032109,positive regulation of response to nutrient levels; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0080135,regulation of cellular response to stress; GO:0140255,regulation of cellular response to phosphate starvation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03105.22:SPX domain","--","--","--"]
["MS07G21940",19.7122,17.3321,20.0175,44.0623,40.1797,39.4108,43.6436,41.182,35.7599,28.6873,34.4667,35.9778,41.1336,39.2866,33.8247,1335,1170,1328,2183,2378,2242,2244,1980,2188,1577,1998,2466,2186,2082,1796,0.981333169,"7.06262E-14","9.3507E-13",false,1.296037142,"1.03022E-19","1.52224E-18","up",1.332478818,"1.33224E-21","2.57675E-20","up",1.367576305,"7.86523E-18","9.16532E-17","up",0.397921904,0.012848182,0.037850155,false,0.085340455,0.608431031,0.76501031,false,0.031685395,0.848305281,0.96481343,false,0.368554428,0.011052136,0.043477965,false,0.062157996,0.687935689,0.869916205,false,"chr_007",39073566,39077326,"-","MS07G21940","--","K05016 chloride channel 7 | (RefSeq) LOW QUALITY PROTEIN: putative chloride channel-like protein CLC-g (A)","--","putative chloride channel-like protein CLC-g [Malus sylvestris]","CLCG_ARATH RecName: Full=Putative chloride channel-like protein CLC-g; AltName: Full=CBS domain-containing protein CBSCLC6;","A0A540MAR5_MALBA RecName: Full=Chloride channel protein {ECO:0000256|RuleBase:RU361221};","Cl- channel CLC-7 and related proteins (CLC superfamily)","GO:0034707,chloride channel complex; GO:0043231,intracellular membrane-bounded organelle; GO:0009705,plant-type vacuole membrane; GO:0015108,chloride transmembrane transporter activity; GO:0005247,voltage-gated chloride channel activity; GO:0034765,regulation of ion transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0008509,anion transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015103,inorganic anion transmembrane transporter activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0005216,ion channel activity; GO:0005244,voltage-gated ion channel activity; GO:0005253,anion channel activity; GO:0005254,chloride channel activity; GO:0008308,voltage-gated anion channel activity; GO:0015267,channel activity; GO:0022803,passive transmembrane transporter activity; GO:0022832,voltage-gated channel activity; GO:0022836,gated channel activity; GO:0006810,transport; GO:0006811,ion transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032879,regulation of localization; GO:0034220,ion transmembrane transport; GO:0034762,regulation of transmembrane transport; GO:0043269,regulation of ion transport; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051049,regulation of transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0031224,intrinsic component of membrane; GO:0032991,protein-containing complex; GO:0034702,ion channel complex; GO:0098796,membrane protein complex; GO:0110165,cellular anatomical entity; GO:1902495,transmembrane transporter complex; GO:1990351,transporter complex; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0000325,plant-type vacuole; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle","PF00654.23:Voltage gated chloride channel","--","--","--"]
["MS07G23320",19.4309,18.4149,21.7577,1.5624,0.6155,1.7609,0.797,0.3788,0.6698,9.1115,20.5016,16.1432,2.9132,6.2723,3.6876,289,273,317,17,8,22,9,4,9,110,261,243,34,73,43,-0.20542523,0.450271417,0.550242769,false,-1.92079485,"4.92817E-12","3.67028E-11","down",-3.725050025,"2.88539E-30","1.01469E-28","down",-4.71760776,"1.02623E-36","3.68723E-35","down",-4.503242937,"2.74632E-22","1.91206E-20","down",-2.785890612,"1.09899E-07","2.54711E-06","down","NA","NA","NA","NA",-3.503807085,"6.62782E-16","6.1485E-14","down",-1.779137545,0.000326889,0.00561383,"down","chr_007",40271390,40272248,"+","MS07G23320","--","--","--","hypothetical protein C1H46_034249 [Malus baccata]","--","A0A540L175_MALBA RecName: Full=Ribosomal_L18_c domain-containing protein {ECO:0000259|Pfam:PF14204};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0005840,ribosome; GO:0008097,5S rRNA binding; GO:0003735,structural constituent of ribosome; GO:0006412,translation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0019843,rRNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle","PF05757.14:Oxygen evolving enhancer protein 3 (PsbQ)","--","--","--"]
["MS07G23440",36.4507,43.32,50.3794,29.3085,22.5981,32.0895,20.8463,16.769,20.5366,50.0816,57.6329,46.4803,34.2487,34.9554,38.3161,1831,2169,2479,1077,992,1354,795,598,932,2042,2478,2363,1350,1374,1509,0.4326238,0.006590421,0.015196123,false,0.019295377,0.895815131,0.920369109,false,-0.420545704,0.022272749,0.039019886,false,-0.876875685,"2.28709E-07","9.40963E-07",false,-1.297719495,"1.01358E-16","3.97127E-15","down",-0.880762365,"8.84313E-10","3.20309E-08",false,-0.457725282,0.008536574,0.186803724,false,-0.837731238,"8.61782E-07","1.44754E-05",false,-0.415276724,0.007973258,0.061386591,false,"chr_007",40341145,40345748,"+","MS07G23440","--","K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] | (RefSeq) acetolactate synthase small subunit 2, chloroplastic-like (A)","ko00290: Valine, leucine and isoleucine biosynthesis; ko00650: Butanoate metabolism; ko00660: C5-Branched dibasic acid metabolism; ko00770: Pantothenate and CoA biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01210: 2-Oxocarboxylic acid metabolism; ko01230: Biosynthesis of amino acids","acetolactate synthase small subunit 2, chloroplastic-like [Malus sylvestris]","ILVH2_ARATH RecName: Full=Acetolactate synthase small subunit 2, chloroplastic; AltName: Full=Acetohydroxy-acid synthase small subunit; Short=AHAS; Short=ALS; Flags: Precursor;","A0A540L181_MALBA RecName: Full=Acetohydroxy-acid synthase small subunit {ECO:0000256|ARBA:ARBA00031510};","Acetolactate synthase, small subunit","GO:0009507,chloroplast; GO:0005829,cytosol; GO:0005777,peroxisome; GO:0003984,acetolactate synthase activity; GO:1990610,acetolactate synthase regulator activity; GO:0043621,protein self-association; GO:0009097,isoleucine biosynthetic process; GO:0050790,regulation of catalytic activity; GO:0001666,response to hypoxia; GO:0009099,valine biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016744,transketolase or transaldolase activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0005488,binding; GO:0005515,protein binding; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006549,isoleucine metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009058,biosynthetic process; GO:0009081,branched-chain amino acid metabolic process; GO:0009082,branched-chain amino acid biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901605,alpha-amino acid metabolic process; GO:1901607,alpha-amino acid biosynthetic process; GO:0065007,biological regulation; GO:0065009,regulation of molecular function; GO:0006950,response to stress; GO:0009628,response to abiotic stimulus; GO:0036293,response to decreased oxygen levels; GO:0050896,response to stimulus; GO:0070482,response to oxygen levels; GO:0006573,valine metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0042579,microbody","PF10369.12:Small subunit of acetolactate synthase","--","--","--"]
["MS08G00510",5.5705,7.583,4.6956,0.8847,0,0,0.1827,0.1302,0.0768,0.3417,0.9181,0.2284,0,0.0295,0,241,327,199,28,0,0,6,4,3,12,34,10,0,1,0,-3.424809373,"6.13844E-15","9.1384E-14","down",-8.847899749,"2.77798E-13","2.36329E-12","down",-4.116958494,0.065497896,0.101262345,false,-5.267399155,"1.85658E-26","3.80394E-25","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-0.692641709,0.766179274,0.870608985,false,"NA","NA","NA","NA","chr_008",602911,604894,"-","MS08G00510","--","--","--","probable polyamine transporter At3g13620 [Malus sylvestris]","PHSC_ARATH RecName: Full=Probable polyamine transporter At3g13620;","A0A540L1L4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD80376.1};","Amino acid transporters","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0015203,polyamine transmembrane transporter activity; GO:0015293,symporter activity; GO:0015846,polyamine transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0022857,transmembrane transporter activity; GO:0015291,secondary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0006810,transport; GO:0008150,biological_process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF13520.9:Amino acid permease","--","--","--"]
["MS08G01420",9.7952,8.9067,12.2046,3.6812,3.3863,7.5392,0.8186,1.4173,1.7688,13.4164,29.6635,19.5613,11.0496,14.8623,8.1529,331,300,404,91,100,214,21,34,54,368,858,669,293,393,216,1.194729418,"1.17578E-05","5.00946E-05","up",0.435785813,0.076012466,0.115344476,false,-0.879812095,0.005377232,0.010881597,false,-2.660266176,"1.17673E-20","1.67813E-19","down",-3.846795085,"2.40925E-27","2.54413E-25","down",-3.081825957,"2.60474E-20","5.22326E-18","down",-1.782118684,"1.39983E-05",0.003747741,"down",-2.062513535,"1.5688E-08","4.05218E-07","down",-1.291521665,0.000188353,0.003590629,"down","chr_008",1824829,1826273,"+","MS08G01420","--","K13466 EIX receptor 1/2 | (RefSeq) receptor-like protein EIX2 (A)","ko04626: Plant-pathogen interaction","leucine-rich repeat receptor-like protein [Malus domestica]","DR100_ARATH RecName: Full=DNA damage-repair/toleration protein DRT100; Flags: Precursor;","H6V789_MALDO SubName: Full=Leucine-rich repeat receptor-like protein {ECO:0000313|EMBL:AFB75325.1};","FOG: Leucine rich repeat","GO:0009507,chloroplast; GO:0000166,nucleotide binding; GO:0006281,DNA repair; GO:0003674,molecular_function; GO:0005488,binding; GO:0036094,small molecule binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13855.9:Leucine rich repeat","--","--","--"]
["MS08G02470",9.4356,10.1713,13.9361,16.0542,18.0337,26.051,18.5104,8.0595,15.9993,12.4902,18.0599,15.869,14.3269,21.5507,18.4365,94,101,136,117,157,218,140,57,144,101,154,160,112,168,144,0.654644496,0.006725995,0.015472511,false,0.988967716,"6.00084E-05",0.000176769,false,1.054490322,"8.50285E-05",0.000243924,"up",0.629847424,0.060952588,0.095700838,false,-0.012866604,0.968956147,0.982304365,false,-0.344367543,0.291198206,0.486290987,false,-0.427575991,0.211184113,0.668547599,false,0.416219676,0.104193818,0.237436775,false,0.090819084,0.727483757,0.888520998,false,"chr_008",3169966,3171984,"-","MS08G02470","--","K01363 cathepsin B [EC:3.4.22.1] | (RefSeq) cathepsin B-like protease 2 (A)","--","hypothetical protein DVH24_038272 [Malus domestica]","CATB2_ARATH RecName: Full=Cathepsin B-like protease 2 {ECO:0000305}; EC=3.4.22.- {ECO:0000305}; AltName: Full=Cathepsin B2 {ECO:0000305}; Short=AtCathB2 {ECO:0000303|PubMed:19453434}; Flags: Precursor;","A0A498K994_MALDO RecName: Full=Pept_C1 domain-containing protein {ECO:0000259|SMART:SM00645};","Cysteine proteinase Cathepsin L","GO:0005576,extracellular region; GO:0005615,extracellular space; GO:0005764,lysosome; GO:0000325,plant-type vacuole; GO:0004197,cysteine-type endopeptidase activity; GO:0006952,defense response; GO:0051603,proteolysis involved in protein catabolic process; GO:0050790,regulation of catalytic activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0019538,protein metabolic process; GO:0030163,protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0065007,biological regulation; GO:0065009,regulation of molecular function; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0000323,lytic vacuole; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00112.26:Papain family cysteine protease","--","--","--"]
["MS08G03260",2.0423,2.2395,2.5051,4.2634,4.2754,4.2972,4.8588,4.2371,4.3283,2.8671,2.0161,2.5185,2.9052,2.6302,2.928,129,141,155,197,236,228,233,190,247,147,109,161,144,130,145,0.318796469,0.171792553,0.251154316,false,0.613071814,0.001504386,0.003415978,false,1.136305375,"5.90648E-10","3.66827E-09","up",1.269569988,"2.74571E-11","1.80639E-10","up",0.96463959,"1.83555E-05",0.000128047,false,0.67140331,0.000347765,0.002771006,false,0.130050061,0.467267678,0.839680142,false,0.836642229,0.00019262,0.001580305,false,0.549155955,0.002742228,0.028340442,false,"chr_008",4159863,4163368,"-","MS08G03260","--","K09422 transcription factor MYB, plant | (RefSeq) telomere repeat-binding factor 1-like (A)","--","hypothetical protein DVH24_038349 [Malus domestica]","SMH3_MAIZE RecName: Full=Single myb histone 3; AltName: Full=Protein SINGLE MYB HISTONE3;","A0A498KE89_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI04075.1};","--","GO:0000785,chromatin; GO:0000781,chromosome, telomeric region; GO:0005730,nucleolus; GO:0000786,nucleosome; GO:0005634,nucleus; GO:0003691,double-stranded telomeric DNA binding; GO:0042803,protein homodimerization activity; GO:0043047,single-stranded telomeric DNA binding; GO:0006334,nucleosome assembly; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0042162,telomeric DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0003697,single-stranded DNA binding; GO:0098847,sequence-specific single stranded DNA binding; GO:0006325,chromatin organization; GO:0006338,chromatin remodeling; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0034728,nucleosome organization; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0065003,protein-containing complex assembly; GO:0065004,protein-DNA complex assembly; GO:0071824,protein-DNA complex subunit organization; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005694,chromosome; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0098687,chromosomal region; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0032991,protein-containing complex; GO:0032993,protein-DNA complex; GO:0044815,DNA packaging complex","PF00249.34:Myb-like DNA-binding domain","MYB-related","TF","MYB->MYB-related"]
["MS08G04090",0.3733,0.4213,0.6906,0.1276,0.1068,0,0.1536,0.0329,0.1549,1.0059,0.8176,0.5993,0.5054,0.5963,0.6249,16,18,29,4,4,0,5,1,6,35,30,26,17,20,21,0.897206935,0.045475529,0.081415312,false,0.514367298,0.259832579,0.334919261,false,"NA","NA","NA","NA","NA","NA","NA","NA",-2.695091968,"4.34795E-05",0.000274767,"down",-2.306238356,0.000624957,0.004488564,"down","NA","NA","NA","NA",-3.33521835,"1.51855E-05",0.000178129,"down",-2.939493449,0.00016068,0.003208731,"down","chr_008",5281193,5284055,"-","MS08G04090","--","K01568 pyruvate decarboxylase [EC:4.1.1.1] | (RefSeq) pyruvate decarboxylase 1-like (A)","ko00010: Glycolysis / Gluconeogenesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","pyruvate decarboxylase 2-like [Malus sylvestris]","PDC2_TOBAC RecName: Full=Pyruvate decarboxylase 2; Short=NtPDC2; EC=4.1.1.1;","A0A498KFD6_MALDO RecName: Full=Pyruvate decarboxylase {ECO:0000256|ARBA:ARBA00013202}; EC=4.1.1.1 {ECO:0000256|ARBA:ARBA00013202};","Thiamine pyrophosphate-requiring enzyme","GO:0005829,cytosol; GO:0016831,carboxy-lyase activity; GO:0000287,magnesium ion binding; GO:0004737,pyruvate decarboxylase activity; GO:0030976,thiamine pyrophosphate binding; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016830,carbon-carbon lyase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0019842,vitamin binding; GO:0036094,small molecule binding; GO:0043168,anion binding; GO:0050997,quaternary ammonium group binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1901681,sulfur compound binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF02776.21:Thiamine pyrophosphate enzyme, N-terminal TPP binding domain","--","--","--"]
["MS08G04520",4.4823,5.5762,4.3012,11.5192,8.617,10.2455,12.1623,8.0817,9.1289,9.2772,10.3686,10.0978,9.2536,12.1437,9.7191,50,62,47,94,84,96,103,64,92,84,99,114,81,106,85,1.235239606,"7.75518E-07","4.09165E-06","up",1.405652692,"1.10523E-07","4.92607E-07","up",1.290235082,"2.43359E-06","9.04731E-06","up",1.315457122,"9.27331E-06","3.03633E-05","up",0.092395529,0.719919443,0.818888405,false,-0.075828329,0.779058193,0.876983174,false,0.022641658,0.933802797,0.983912065,false,0.071372168,0.76146045,0.867847644,false,-0.090955066,0.713623543,0.882246998,false,"chr_008",5962550,5964024,"-","MS08G04520","--","K25866 nuclear migration protein NudC | (RefSeq) protein BOBBER 1-like (A)","--","nudC domain-containing protein 2-like [Malus domestica]","BOB2_ARATH RecName: Full=Protein BOBBER 2;","A0A5N5GLV2_9ROSA SubName: Full=NudC domain-containing protein 2-like {ECO:0000313|EMBL:KAB2616526.1};","Nuclear distribution protein NUDC","GO:0005737,cytoplasm; GO:0051082,unfolded protein binding; GO:0006457,protein folding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF04969.19:CS domain","--","--","--"]
["MS08G05550",1.9005,0.66,0.9452,0,0,0,0,0,0,0.03,0,0,0,0,0,78,27,38,0,0,0,0,0,0,1,0,0,0,0,0,-6.713112244,"3.06298E-07","1.72704E-06","down",-7.388249793,"1.7914E-08","8.85564E-08","down",-7.517376318,"1.53764E-08","7.87754E-08","down",-7.40197812,"2.11008E-08","9.96429E-08","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_008",7414609,7417232,"+","MS08G05550","--","K05909 laccase [EC:1.10.3.2] | (RefSeq) laccase-2 (A)","--","laccase-2-like [Malus sylvestris]","LAC2_ARATH RecName: Full=Laccase-2; EC=1.10.3.2; AltName: Full=Benzenediol:oxygen oxidoreductase 2; AltName: Full=Diphenol oxidase 2; AltName: Full=Urishiol oxidase 2; Flags: Precursor;","A0A540MNU4_MALBA RecName: Full=Laccase {ECO:0000256|ARBA:ARBA00012297, ECO:0000256|RuleBase:RU361119}; EC=1.10.3.2 {ECO:0000256|ARBA:ARBA00012297, ECO:0000256|RuleBase:RU361119}; AltName: Full=Benzenediol:oxygen oxidoreductase {ECO:0000256|RuleBase:RU361119}; AltName: Full=Diphenol oxidase {ECO:0000256|RuleBase:RU361119}; AltName: Full=Urishiol oxidase {ECO:0000256|RuleBase:RU361119};","Multicopper oxidases","GO:0048046,apoplast; GO:0005507,copper ion binding; GO:0052716,hydroquinone:oxygen oxidoreductase activity; GO:0016491,oxidoreductase activity; GO:0046274,lignin catabolic process; GO:0080022,primary root development; GO:0009414,response to water deprivation; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016679,oxidoreductase activity, acting on diphenols and related substances as donors; GO:0016682,oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; GO:0006725,cellular aromatic compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009698,phenylpropanoid metabolic process; GO:0009808,lignin metabolic process; GO:0009987,cellular process; GO:0019439,aromatic compound catabolic process; GO:0019748,secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0046271,phenylpropanoid catabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901575,organic substance catabolic process; GO:0007275,multicellular organism development; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048364,root development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:0001101,response to acid chemical; GO:0006950,response to stress; GO:0009415,response to water; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF00394.25:Multicopper oxidase","--","--","--"]
["MS08G06780",6.8992,11.9016,9.9253,2.3967,3.1527,3.9576,1.8595,1.8603,1.9658,5.5262,9.3106,7.1769,4.6717,7.9729,5.8665,303,521,427,77,121,146,62,58,78,197,350,319,161,274,202,-0.204436235,0.430286502,0.530626234,false,-0.343311386,0.193318937,0.259867175,false,-1.38209452,"9.05938E-07","3.5912E-06","down",-2.053353408,"3.11513E-15","2.97417E-14","down",-1.837456789,"2.10301E-13","5.74957E-12","down",-1.694657616,"1.10871E-10","4.90115E-09","down",-0.674099605,0.013280885,0.234464591,false,-1.161646351,"2.09299E-05",0.000236331,"down",-1.012662395,0.000342536,0.005828365,"down","chr_008",9046461,9061314,"+","MS08G06780","--","K15397 3-ketoacyl-CoA synthase [EC:2.3.1.199] | (RefSeq) 3-ketoacyl-CoA synthase 12-like (A)","ko00062: Fatty acid elongation; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko04626: Plant-pathogen interaction","3-ketoacyl-CoA synthase 12-like [Malus domestica]","KCS12_ARATH RecName: Full=3-ketoacyl-CoA synthase 12 {ECO:0000303|PubMed:18465198}; Short=KCS-12 {ECO:0000303|PubMed:18465198}; EC=2.3.1.199 {ECO:0000305}; AltName: Full=Very long-chain fatty acid condensing enzyme 12 {ECO:0000303|PubMed:18465198}; Short=VLCFA condensing enzyme 12 {ECO:0000303|PubMed:18465198}; Flags: Precursor;","A0A498K853_MALDO RecName: Full=3-ketoacyl-CoA synthase {ECO:0000256|PIRNR:PIRNR036417}; EC=2.3.1.- {ECO:0000256|PIRNR:PIRNR036417};","--","GO:0005783,endoplasmic reticulum; GO:0016020,membrane; GO:0102756,very-long-chain 3-ketoacyl-CoA synthase activity; GO:0006633,fatty acid biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF08392.15:FAE1/Type III polyketide synthase-like protein","--","--","--"]
["MS08G07420",2.0066,1.9315,1.5778,7.265,5.7403,2.9376,4.6074,4.9654,7.2032,0.7683,0.5702,1.1789,2.1424,2.0445,1.2797,74,71,57,196,185,91,129,130,240,23,18,44,62,59,37,-0.935189146,0.011940695,0.025636405,false,0.279520878,0.374158601,0.455094819,false,1.755363982,"3.4857E-06","1.26755E-05","up",1.880693291,"5.03683E-13","3.94746E-12","up",2.829421069,"8.61624E-17","3.41834E-15","up",1.617790146,"6.24042E-08","1.51616E-06","up",0.122733427,0.740811472,0.935962007,false,2.714591578,"9.08721E-10","3.04777E-08","up",1.501854407,0.000176874,0.003423608,"up","chr_008",9974674,9978191,"-","MS08G07420","--","K17815 exonuclease V [EC:3.1.-.-] | (RefSeq) exonuclease V, chloroplastic (A)","--","exonuclease V, chloroplastic [Malus domestica]","EXO5_ARATH RecName: Full=Exonuclease V, chloroplastic; Short=Exo V; EC=3.1.-.-; Flags: Precursor;","A0A498KAM7_MALDO RecName: Full=MaoC-like domain-containing protein {ECO:0000259|Pfam:PF01575};","Uncharacterized conserved protein","GO:0009507,chloroplast; GO:0005634,nucleus; GO:0051539,4 iron, 4 sulfur cluster binding; GO:0003677,DNA binding; GO:0046872,metal ion binding; GO:0045145,single-stranded DNA 5'-3' exodeoxyribonuclease activity; GO:0036297,interstrand cross-link repair; GO:0003674,molecular_function; GO:0005488,binding; GO:0051536,iron-sulfur cluster binding; GO:0051540,metal cluster binding; GO:0003676,nucleic acid binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0004518,nuclease activity; GO:0004527,exonuclease activity; GO:0004529,exodeoxyribonuclease activity; GO:0004536,deoxyribonuclease activity; GO:0008297,single-stranded DNA exodeoxyribonuclease activity; GO:0008409,5'-3' exonuclease activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016796,exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters; GO:0016895,exodeoxyribonuclease activity, producing 5'-phosphomonoesters; GO:0035312,5'-3' exodeoxyribonuclease activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006281,DNA repair; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF09810.12:Exonuclease V - a 5' deoxyribonuclease","--","--","--"]
["MS08G07700",9.4875,11.0522,6.059,18.286,21.7905,18.5482,20.8773,16.4677,18.0665,16.5079,14.2099,11.8401,14.927,14.0208,14.2232,422,490,264,595,847,693,705,520,726,596,541,533,521,488,496,0.864583711,0.001239561,0.003428273,false,0.986604798,"3.06164E-05","9.49214E-05",false,1.353953422,"2.80122E-07","1.19623E-06","up",1.337212105,"1.6429E-07","6.88785E-07","up",0.48677209,0.017361255,0.048568428,false,0.366035328,0.021938292,0.077663856,false,-0.020468141,0.914112161,0.979417695,false,0.508300364,0.017589397,0.062617283,false,0.394089686,0.021043161,0.120256211,false,"chr_008",10265653,10276499,"-","MS08G07700","--","K08472 mlo protein | (RefSeq) MLO-like protein 2 (A)","--","MLO-like protein 2 [Malus domestica]","MLO6_ARATH RecName: Full=MLO-like protein 6; Short=AtMlo6;","A0A540MPB2_MALBA RecName: Full=MLO-like protein {ECO:0000256|RuleBase:RU280816};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005516,calmodulin binding; GO:0050832,defense response to fungus; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF03094.18:Mlo family","--","--","--"]
["MS08G08910",23.7704,29.152,29.7494,10.7541,6.5824,8.0565,6.6854,5.4216,5.852,14.8508,17.4432,17.0928,10.834,8.1078,8.6317,562,687,689,186,136,160,120,91,125,285,353,409,201,150,160,-0.556654921,0.000244092,0.000801285,false,-1.28751058,"9.47399E-12","6.86034E-11","down",-1.491806116,"4.91731E-11","3.47325E-10","down",-1.918035158,"4.03047E-24","7.1458E-23","down",-1.348977136,"2.67381E-13","7.19244E-12","down",-0.614752945,0.007149299,0.032631132,false,-0.427218222,0.097132975,0.524751666,false,-0.918558454,"4.7777E-05",0.000483338,false,-0.179183097,0.485831015,0.747834958,false,"chr_008",12591229,12594333,"+","MS08G08910","--","K02939 large subunit ribosomal protein L9 | (RefSeq) 50S ribosomal protein L9, chloroplastic-like (A)","ko03010: Ribosome","50S ribosomal protein L9, chloroplastic-like [Malus domestica]","RK9_ARATH RecName: Full=50S ribosomal protein L9, chloroplastic; AltName: Full=CL9; Flags: Precursor;","A0A498KB17_MALDO RecName: Full=50S ribosomal protein L9, chloroplastic {ECO:0000256|ARBA:ARBA00017532}; AltName: Full=CL9 {ECO:0000256|ARBA:ARBA00031047};","Mitochondrial ribosomal protein L9","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0005829,cytosol; GO:0005739,mitochondrion; GO:0000311,plastid large ribosomal subunit; GO:0003729,mRNA binding; GO:0019843,rRNA binding; GO:0003735,structural constituent of ribosome; GO:0006412,translation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0000313,organellar ribosome; GO:0000315,organellar large ribosomal subunit; GO:0005840,ribosome; GO:0009547,plastid ribosome; GO:0015934,large ribosomal subunit; GO:0032991,protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0044391,ribosomal subunit; GO:1990904,ribonucleoprotein complex","PF03948.17:Ribosomal protein L9, C-terminal domain","--","--","--"]
["MS08G09480",379.1961,314.8483,268.4914,26.1808,139.7868,35.635,30.7289,71.874,39.0033,255.482,85.0758,109.0333,70.7266,95.2278,166.1904,42033,34787,29154,2123,13541,3318,2586,5656,3906,22987,8072,12232,6152,8260,14443,-0.888448674,0.021303858,0.042382545,false,-1.252640842,"1.16018E-05","3.85551E-05","down",-2.012234572,0.014874439,0.027197669,"down",-2.477420992,"3.83747E-15","3.64046E-14","down",-1.572646237,0.020374859,0.055326284,false,-1.210539433,0.000973901,0.006458366,"down",-0.47581562,0.572199479,0.882640981,false,-1.096943078,0.241908004,0.42328606,false,-0.727794206,0.379727919,0.664392025,false,"chr_008",13945800,13988595,"-","MS08G09480","--","K08711 ATP-binding cassette, subfamily G (WHITE), member 2, PDR | (RefSeq) pleiotropic drug resistance protein 2-like (A)","ko02010: ABC transporters","pleiotropic drug resistance protein 2-like [Malus sylvestris]","PDR2_NICPL RecName: Full=Pleiotropic drug resistance protein 2; AltName: Full=NpPDR2;","A0A5N5GM45_9ROSA SubName: Full=Pleiotropic drug resistance protein 2-like {ECO:0000313|EMBL:KAB2614941.1};","Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily","GO:0016021,integral component of membrane; GO:0140359,ABC-type transporter activity; GO:0005524,ATP binding; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015399,primary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0140657,ATP-dependent activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF01061.27:ABC-2 type transporter","--","--","--"]
["MS08G11160",27.3276,31.8299,32.0553,18.5059,16.9152,27.9486,16.5247,13.4572,13.5255,26.4045,30.1097,28.7139,25.6707,36.513,25.731,1845,2142,2120,914,998,1585,847,645,825,1447,1740,1962,1360,1929,1362,0.088202998,0.449441676,0.549497833,false,0.238804618,0.173878805,0.237057847,false,-0.32042781,0.116693718,0.167923044,false,-0.7814161,"1.35489E-06","5.01093E-06",false,-0.85795977,"1.71486E-08","2.2552E-07",false,-1.006272642,"5.28228E-07","1.03671E-05","down",-0.462856948,0.035253763,0.353216243,false,-0.392362115,0.048538217,0.135256147,false,-0.534616966,0.021555413,0.122307666,false,"chr_008",18672968,18676865,"+","MS08G11160","--","--","--","glycosyltransferase BC10 [Malus domestica]","BC10_ORYSJ RecName: Full=Glycosyltransferase BC10 {ECO:0000305}; EC=2.4.-.- {ECO:0000269|PubMed:18939965}; AltName: Full=Protein BRITTLE CULM 10 {ECO:0000303|PubMed:18939965}; AltName: Full=Protein FRAGILE CULM 116 {ECO:0000303|PubMed:27708650};","A0A5N5GK16_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2615183.1};","--","GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0016757,glycosyltransferase activity; GO:0030244,cellulose biosynthetic process; GO:0009664,plant-type cell wall organization; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0030243,cellulose metabolic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF02485.24:Core-2/I-Branching enzyme","--","--","--"]
["MS08G12550",2.0016,2.4189,1.3932,0.2487,1.1973,0.1625,0.2996,0.3845,0.2518,3.7549,3.0294,2.9666,1.2754,1.2208,3.0752,44,53,30,4,23,3,5,6,5,67,57,66,22,21,53,0.931024732,0.005402266,0.012743862,false,0.221935011,0.630978986,0.69922812,false,-1.598549513,0.028912749,0.049183046,"down",-2.371182981,"2.58565E-05","7.88954E-05","down",-3.292082914,"3.92282E-11","7.86392E-10","down",-2.573402525,"4.3866E-05",0.000483435,"down","NA","NA","NA","NA",-2.508176299,0.000187016,0.001541467,"down",-1.788837793,0.02099051,0.120060865,false,"chr_008",23981421,23989494,"+","MS08G12550","--","K19891 glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39] | (RefSeq) LOW QUALITY PROTEIN: glucan endo-1,3-beta-glucosidase 3-like (A)","ko00500: Starch and sucrose metabolism; ko01100: Metabolic pathways","glucan endo-1,3-beta-glucosidase-like [Malus domestica]","E13G_TOBAC RecName: Full=Glucan endo-1,3-beta-glucosidase, acidic isoform GI9; EC=3.2.1.39; AltName: Full=(1->3)-beta-glucan endohydrolase; Short=(1->3)-beta-glucanase; AltName: Full=Beta-1,3-endoglucanase; AltName: Full=PR-2B; AltName: Full=PR-36; Flags: Precursor;","A0A498K787_MALDO RecName: Full=Glucan endo-1,3-beta-D-glucosidase {ECO:0000256|ARBA:ARBA00012780}; EC=3.2.1.39 {ECO:0000256|ARBA:ARBA00012780}; AltName: Full=(1->3)-beta-glucan endohydrolase {ECO:0000256|ARBA:ARBA00033335}; AltName: Full=Beta-1,3-endoglucanase {ECO:0000256|ARBA:ARBA00033417};","--","GO:0046658,anchored component of plasma membrane; GO:0005615,extracellular space; GO:0042973,glucan endo-1,3-beta-D-glucosidase activity; GO:0005975,carbohydrate metabolic process; GO:0006952,defense response; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0008422,beta-glucosidase activity; GO:0015926,glucosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005886,plasma membrane; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0031225,anchored component of membrane; GO:0031226,intrinsic component of plasma membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity; GO:0005576,extracellular region","PF00332.21:Glycosyl hydrolases family 17","--","--","--"]
["MS08G13810",16.9049,14.0951,16.4346,22.4619,21.1484,26.6736,24.4588,23.1213,29.2014,13.057,12.8937,14.5915,17.7924,15.8499,18.6795,965,802,919,938,1055,1279,1060,937,1506,605,630,843,797,708,836,-0.038511958,0.787792064,0.84409149,false,0.434404889,0.00276255,0.005952976,false,0.778141528,"1.60529E-07","7.11642E-07",false,0.975238275,"3.52546E-11","2.29001E-10",false,1.02750414,"1.04019E-12","2.60331E-11","up",0.556943022,0.00019929,0.001735352,false,0.196076445,0.188733015,0.646574722,false,0.834259391,"4.18955E-09","1.22987E-07",false,0.368825975,0.012426441,0.083926922,false,"chr_008",26771086,26774233,"+","MS08G13810","--","K14494 DELLA protein | (RefSeq) DELLA protein GAI-like (A)","ko04075: Plant hormone signal transduction","scarecrow-like protein 21 [Malus domestica]","PAT1_ARATH RecName: Full=Scarecrow-like transcription factor PAT1; AltName: Full=GRAS family protein 29; Short=AtGRAS-29; AltName: Full=Protein PHYTOCHROME A SIGNAL TRANSDUCTION 1;","A0A498KD23_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI03382.1};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0043565,sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:1990110,callus formation; GO:0009640,photomorphogenesis; GO:0009585,red, far-red light phototransduction; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009611,response to wounding; GO:0032501,multicellular organismal process; GO:0042060,wound healing; GO:0050896,response to stimulus; GO:0007275,multicellular organism development; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009639,response to red or far red light; GO:0009791,post-embryonic development; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0007602,phototransduction; GO:0009581,detection of external stimulus; GO:0009582,detection of abiotic stimulus; GO:0009583,detection of light stimulus; GO:0009605,response to external stimulus; GO:0009987,cellular process; GO:0010017,red or far-red light signaling pathway; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051606,detection of stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0071214,cellular response to abiotic stimulus; GO:0071478,cellular response to radiation; GO:0071482,cellular response to light stimulus; GO:0071489,cellular response to red or far red light; GO:0104004,cellular response to environmental stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF03514.17:GRAS domain family","GRAS","TF","GRAS"]
["MS08G14990",4.2425,3.5638,4.3653,1.5649,1.676,1.7437,1.8405,1.6837,1.8821,1.9704,2.2619,2.1292,2.2527,1.8933,2.5768,252,211,254,68,87,87,83,71,101,95,115,128,105,88,120,-0.749904189,"6.31769E-05",0.000234511,false,-0.563168597,0.00671208,0.013280729,false,-1.071293445,"2.58908E-07","1.11154E-06","down",-0.886818425,"1.42012E-05","4.52824E-05",false,-0.12420828,0.567068374,0.701116704,false,-0.308057307,0.194919388,0.374064093,false,0.182197098,0.438878877,0.824591123,false,-0.304157286,0.177148346,0.343092726,false,-0.482698362,0.047164829,0.20365925000000001,false,"chr_008",28316102,28320565,"-","MS08G14990","--","--","--","uncharacterized protein LOC103417651 [Malus domestica]","Y5162_ARATH RecName: Full=Uncharacterized protein At5g41620;","A0A540LWV4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD90954.1};","--","GO:0009507,chloroplast; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS08G16030",2.5945,3.2457,1.6676,0,0,0,0,0,0.0355,0.5525,0.3368,0.1582,0.1633,0,0.1634,81,101,51,0,0,0,0,0,1,14,9,5,4,0,4,-2.677476355,"2.06019E-07","1.19412E-06","down",-4.232678219,"1.85413E-10","1.16727E-09","down",-8.222154719,"6.70659E-11","4.66408E-10","down",-7.14543867,"1.21985E-08","5.9376E-08","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_008",30351936,30354004,"+","MS08G16030","--","--","--","uncharacterized protein LOC126614515 [Malus sylvestris]","--","A0A498K879_MALDO RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS00028};","--","--","--","C2H2","TF","C2H2"]
["MS08G16990",15.7448,15.5447,19.9085,110.4016,83.5736,111.0584,93.1356,61.1916,64.7585,61.366,69.9827,88.2504,91.2026,103.9884,91.0089,440,433,545,2257,2041,2607,1976,1214,1635,1392,1674,2496,2000,2274,1994,2.287503737,"1.4935E-36","1.10336E-34","up",2.777469005,"2.47085E-82","5.17599E-80","up",2.787479599,"7.46647E-58","9.50411E-56","up",2.387625083,"1.02548E-27","2.25652E-26","up",0.111588729,0.624743689,0.747517918,false,-0.376917118,0.063745717,0.17119907,false,-0.403428433,0.067083638,0.455079559,false,0.517286921,0.005330543,0.024237966,false,0.034439728,0.82169086,0.932656651,false,"chr_008",31639135,31641147,"-","MS08G16990","--","--","--","stem-specific protein TSJT1-like [Malus domestica]","TSJT1_TOBAC RecName: Full=Stem-specific protein TSJT1;","A0A498K9T3_MALDO RecName: Full=DUF3700 domain-containing protein {ECO:0000259|SMART:SM01172};","--","--","PF12481.11:Aluminium induced protein","--","--","--"]
["MS08G17380",2.8893,2.4639,2.5071,1.4106,1.0627,0.8845,0.7883,1.4244,1.7361,2.034,1.4949,1.2439,1.4465,0.5538,1.0529,140,119,119,50,45,36,29,49,76,80,62,61,55,21,40,-0.533657654,0.056194373,0.097556099,false,-1.067795047,0.002253732,0.004940086,"down",-1.015878654,0.000469861,0.001175976,"down",-0.713739331,0.02378391,0.041541203,false,-0.17048784,0.659616487,0.774100415,false,0.36953454,0.412997582,0.607088729,false,0.298299358,0.455020164,0.832497536,false,-0.465319076,0.203131783,0.376224808,false,0.081276547,0.85279955,0.945792997,false,"chr_008",32179946,32182181,"+","MS08G17380","--","K13466 EIX receptor 1/2 | (RefSeq) receptor-like protein EIX2 (A)","ko04626: Plant-pathogen interaction","receptor-like protein 2 [Pyrus x bretschneideri]","PSYR1_ARATH RecName: Full=Tyrosine-sulfated glycopeptide receptor 1 {ECO:0000305}; EC=2.7.11.1 {ECO:0000305}; AltName: Full=PSY1 receptor {ECO:0000303|PubMed:23062058};","A0A5N5FR71_9ROSA SubName: Full=Receptor-like protein 2 {ECO:0000313|EMBL:KAB2605629.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0042802,identical protein binding; GO:0001653,peptide receptor activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004888,transmembrane signaling receptor activity; GO:0045851,pH reduction; GO:0006468,protein phosphorylation; GO:0031347,regulation of defense response; GO:0009826,unidimensional cell growth; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006885,regulation of pH; GO:0008150,biological_process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055067,monovalent inorganic cation homeostasis; GO:0055080,cation homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0098771,inorganic ion homeostasis; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006950,response to stress; GO:0006952,defense response; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0080134,regulation of response to stress; GO:0000902,cell morphogenesis; GO:0009653,anatomical structure morphogenesis; GO:0016049,cell growth; GO:0032502,developmental process; GO:0040007,growth; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0060560,developmental growth involved in morphogenesis; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF13855.9:Leucine rich repeat","--","--","--"]
["MS08G18460",0.2569,0.315,0.2914,0.5463,0.588,0.6797,0.5264,0.4423,0.4423,0.6682,0.8337,0.3667,0.7639,0.4742,0.9831,9,11,10,14,18,20,14,11,14,19,25,13,21,13,27,1.29052766,0.020967809,0.041787141,"up",1.656410012,0.001815502,0.004050493,"up","NA","NA","NA","NA","NA","NA","NA","NA",-0.287991124,0.594742713,0.723113615,false,-0.64959102,0.204427744,0.387235878,false,"NA","NA","NA","NA",0.010778235,0.983392222,0.991565908,false,-0.344661257,0.475065523,0.73997562,false,"chr_008",34888878,34900556,"-","MS08G18460","--","K03353 anaphase-promoting complex subunit 6 | (RefSeq) anaphase-promoting complex subunit 6 isoform X1 (A)","ko04120: Ubiquitin mediated proteolysis","anaphase-promoting complex subunit 6 isoform X3 [Malus sylvestris]","CDC16_ARATH RecName: Full=Anaphase-promoting complex subunit 6; AltName: Full=Cell division cycle protein 16 homolog; Short=CDC16 homolog; AltName: Full=Cyclosome subunit 6; AltName: Full=Protein NOMEGA;","A0A540MWI3_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE03152.1};","Anaphase-promoting complex (APC), Cdc16 subunit","GO:0005680,anaphase-promoting complex; GO:0005737,cytoplasm; GO:0031145,anaphase-promoting complex-dependent catabolic process; GO:0051301,cell division; GO:0007091,metaphase/anaphase transition of mitotic cell cycle; GO:0010087,phloem or xylem histogenesis; GO:0045842,positive regulation of mitotic metaphase/anaphase transition; GO:0016567,protein ubiquitination; GO:0032875,regulation of DNA endoreduplication; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009987,cellular process; GO:0010498,proteasomal protein catabolic process; GO:0019538,protein metabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0000070,mitotic sister chromatid segregation; GO:0000278,mitotic cell cycle; GO:0000280,nuclear division; GO:0000819,sister chromatid segregation; GO:0006996,organelle organization; GO:0007049,cell cycle; GO:0007059,chromosome segregation; GO:0010564,regulation of cell cycle process; GO:0010965,regulation of mitotic sister chromatid separation; GO:0016043,cellular component organization; GO:0022402,cell cycle process; GO:0033043,regulation of organelle organization; GO:0033044,regulation of chromosome organization; GO:0033045,regulation of sister chromatid segregation; GO:0044770,cell cycle phase transition; GO:0044772,mitotic cell cycle phase transition; GO:0044784,metaphase/anaphase transition of cell cycle; GO:0048285,organelle fission; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051128,regulation of cellular component organization; GO:0051276,chromosome organization; GO:0051304,chromosome separation; GO:0051306,mitotic sister chromatid separation; GO:0051726,regulation of cell cycle; GO:0051983,regulation of chromosome segregation; GO:0065007,biological regulation; GO:0071840,cellular component organization or biogenesis; GO:0098813,nuclear chromosome segregation; GO:0140014,mitotic nuclear division; GO:1903047,mitotic cell cycle process; GO:1905818,regulation of chromosome separation; GO:0009888,tissue development; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0007088,regulation of mitotic nuclear division; GO:0007346,regulation of mitotic cell cycle; GO:0010638,positive regulation of organelle organization; GO:0030071,regulation of mitotic metaphase/anaphase transition; GO:0045787,positive regulation of cell cycle; GO:0045840,positive regulation of mitotic nuclear division; GO:0045931,positive regulation of mitotic cell cycle; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0051130,positive regulation of cellular component organization; GO:0051783,regulation of nuclear division; GO:0051785,positive regulation of nuclear division; GO:0090068,positive regulation of cell cycle process; GO:1901970,positive regulation of mitotic sister chromatid separation; GO:1901987,regulation of cell cycle phase transition; GO:1901989,positive regulation of cell cycle phase transition; GO:1901990,regulation of mitotic cell cycle phase transition; GO:1901992,positive regulation of mitotic cell cycle phase transition; GO:1902099,regulation of metaphase/anaphase transition of cell cycle; GO:1902101,positive regulation of metaphase/anaphase transition of cell cycle; GO:1905820,positive regulation of chromosome separation; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:0070647,protein modification by small protein conjugation or removal; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006260,DNA replication; GO:0006261,DNA-templated DNA replication; GO:0006275,regulation of DNA replication; GO:0006725,cellular aromatic compound metabolic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042023,DNA endoreduplication; GO:0044786,cell cycle DNA replication; GO:0046483,heterocycle metabolic process; GO:0051052,regulation of DNA metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0090329,regulation of DNA-templated DNA replication; GO:1901360,organic cyclic compound metabolic process; GO:0000151,ubiquitin ligase complex; GO:0000152,nuclear ubiquitin ligase complex; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF12895.10:Anaphase-promoting complex, cyclosome, subunit 3","--","--","--"]
["MS08G19590",12.9207,12.7158,12.541,6.7004,5.8202,6.0063,6.3753,4.2178,4.1315,5.9882,7.9549,9.6661,3.9988,8.4918,6.5136,630,618,599,239,248,246,236,146,182,237,332,477,153,324,249,-0.509757794,0.007299435,0.016618979,false,-0.719856329,0.003879802,0.008089061,false,-0.829920983,"5.81177E-08","2.73259E-07",false,-1.088456053,"1.20305E-06","4.4868E-06","down",-0.565060197,0.035476652,0.087417573,false,-0.354956801,0.256174636,0.447961772,false,-0.263325459,0.285415498,0.732518073,false,-0.300918955,0.169101721,0.332246024,false,-0.084448513,0.764381942,0.907294393,false,"chr_008",36568280,36571573,"-","MS08G19590","--","K09419 heat shock transcription factor, other eukaryote | (RefSeq) LOW QUALITY PROTEIN: heat stress transcription factor A-6b (A)","--","hypothetical protein C1H46_035942 [Malus baccata]","HFA6B_ARATH RecName: Full=Heat stress transcription factor A-6b; Short=AtHsfA6b; AltName: Full=AtHsf-07;","A0A540KWA6_MALBA RecName: Full=HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434};","Heat shock transcription factor","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0034605,cellular response to heat; GO:0006357,regulation of transcription by RNA polymerase II; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0000977,RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000987,cis-regulatory region sequence-specific DNA binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009266,response to temperature stimulus; GO:0009408,response to heat; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00447.20:HSF-type DNA-binding","HSF","TF","HSF"]
["MS08G19600",3.1157,2.5007,2.8926,5.143,4.1438,4.689,5.7145,3.9085,5.635,3.853,4.3268,4.9953,4.1503,4.6878,3.5841,265,212,241,320,308,335,369,236,433,266,315,430,277,312,239,0.817023725,"4.6638E-06","2.15719E-05",false,0.838368547,"7.33624E-06","2.51995E-05",false,0.928278171,"4.0515E-07","1.68804E-06",false,1.123880263,"8.33725E-08","3.63472E-07","up",0.320450528,0.122696007,0.230723074,false,0.300618477,0.160326131,0.327601345,false,0.193558316,0.352563228,0.779466333,false,0.128664114,0.47048375,0.655513216,false,0.114855346,0.539317311,0.78475496,false,"chr_008",36583642,36591629,"+","MS08G19600","--","K17506 protein phosphatase 1L [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 59 isoform X1 (A)","--","hypothetical protein C1H46_037164 [Malus baccata]","Y3333_ARATH RecName: Full=Probable inactive protein kinase At3g63330;","A0A540KSW3_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD77298.1};","Serine/threonine protein phosphatase","GO:0005524,ATP binding; GO:0004672,protein kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF00481.24:Protein phosphatase 2C","--","--","--"]
["MS08G20590",3.4694,3.9403,5.0452,2.2594,2.1348,2.708,1.2502,0.7607,1.431,3.6089,3.3458,4.8994,3.1074,3.7226,2.5674,212,240,302,101,114,139,58,33,79,179,175,303,149,178,123,0.121476392,0.60167985,0.690253552,false,-0.110000333,0.625597896,0.694660417,false,-0.595597839,0.007067376,0.013964103,false,-1.566557928,"1.87478E-08","8.89693E-08","down",-1.674183219,"1.60503E-08","2.12949E-07","down",-1.441203151,"1.00298E-06","1.83326E-05","down",-0.972538934,0.000787505,0.051340807,false,-0.698679623,0.003029729,0.015404784,false,-0.459976796,0.04755069,0.204715991,false,"chr_008",37716901,37719513,"+","MS08G20590","--","K01214 isoamylase [EC:3.2.1.68] | (RefSeq) LOW QUALITY PROTEIN: isoamylase 2, chloroplastic-like (A)","ko00500: Starch and sucrose metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","isoamylase 2, chloroplastic-like [Malus sylvestris]","ISOA2_ARATH RecName: Full=Isoamylase 2, chloroplastic; Short=AtISA2; AltName: Full=Protein DEBRANCHING ENZYME 1; Flags: Precursor;","A0A498KB18_MALDO RecName: Full=Aamy domain-containing protein {ECO:0000259|SMART:SM00642};","1,4-alpha-glucan branching enzyme/starch branching enzyme II","GO:0009507,chloroplast; GO:0019156,isoamylase activity; GO:0010021,amylopectin biosynthetic process; GO:0019252,starch biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:2000896,amylopectin metabolic process; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0005982,starch metabolic process; GO:0006073,cellular glucan metabolic process; GO:0009250,glucan biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02922.21:Carbohydrate-binding module 48 (Isoamylase N-terminal domain)","--","--","--"]
["MS08G21390",57.0152,62.299,59.4688,15.7571,11.0629,19.4775,12.7342,7.3328,13.0332,18.782,25.0513,20.3296,15.3214,24.0761,24.6622,460,501,470,93,78,132,78,42,95,123,173,166,97,152,156,-1.295805733,"4.2933E-15","6.4929E-14","down",-1.192003429,"6.64496E-09","3.472E-08","down",-1.744794849,"3.26675E-15","3.58788E-14","down",-2.14779809,"2.67045E-20","3.70895E-19","down",-0.841276315,0.002698369,0.010188735,false,-0.942520326,0.002149348,0.012474606,false,-0.406281994,0.207453164,0.66474679,false,-0.43375311,0.097802448,0.227064536,false,-0.529133109,0.068245046,0.257853898,false,"chr_008",38636779,38637123,"-","MS08G21390","--","K08472 mlo protein | (RefSeq) MLO-like protein 1 (A)","--","MLO-like protein 1 [Malus domestica]","MLO1_ARATH RecName: Full=MLO-like protein 1; Short=AtMlo1; AltName: Full=MLO protein homolog 1; Short=AtMlo-H1;","A0A540KCM5_MALBA RecName: Full=MLO-like protein {ECO:0000256|RuleBase:RU280816};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005516,calmodulin binding; GO:0006952,defense response; GO:0009607,response to biotic stimulus; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF03094.18:Mlo family","--","--","--"]
["MS08G22090",526.874,428.85,338.6244,1055.9076,1306.3923,699.665,1283.4211,1562.8797,955.8264,3121.3025,2224.993,2979.5318,2311.7633,2084.5521,2033.1843,10202,8277,6423,14957,22106,11380,18867,21484,16721,49058,36877,58390,35126,31585,30866,2.875184787,"7.16312E-36","5.10066E-34","up",2.601894121,"1.63215E-41","8.59337E-40","up",1.46686362,"5.62275E-07","2.29801E-06","up",1.842710177,"6.2708E-13","4.87602E-12","up",-1.018961817,"4.79943E-05",0.000299303,"down",-0.745894236,0.000561868,0.004106862,false,0.370323815,0.23240762,0.689006606,false,-1.387210595,"1.4745E-06","2.3215E-05","down",-1.107741098,"2.46585E-05",0.00070608,"down","chr_008",39224629,39225836,"+","MS08G22090","--","--","--","protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial [Malus domestica]","ARG2_VIGRR RecName: Full=Indole-3-acetic acid-induced protein ARG2;","A0A498KAS7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI02562.1};","--","--","PF03242.16:Late embryogenesis abundant protein","--","--","--"]
["MS09G00320",5.9985,4.3198,8.0939,11.7719,11.7913,10.5703,9.5047,8.9514,9.4005,11.085,9.4712,12.8808,10.104,11.0811,9.6963,202,145,267,290,347,299,243,214,286,303,273,439,267,292,256,1.055209748,"4.92095E-05",0.000186698,"up",1.043131954,"1.10562E-05","3.68379E-05","up",1.113128793,"1.45463E-05","4.7707E-05","up",0.886265429,0.00030487,0.000775998,false,-0.156753205,0.408599538,0.560411303,false,-0.142896443,0.381018265,0.576706145,false,-0.230141271,0.192226808,0.649553584,false,0.076335225,0.705303768,0.831719282,false,0.095380401,0.587109906,0.813629092,false,"chr_009",645007,650143,"+","MS09G00320","--","K22279 vicianin beta-glucosidase [EC:3.2.1.119] | (RefSeq) vicianin hydrolase-like isoform X1 (A)","--","vicianin hydrolase-like isoform X1 [Malus sylvestris]","VICHY_VICSN RecName: Full=Vicianin hydrolase {ECO:0000312|EMBL:ABD03937.1}; Short=VH {ECO:0000303|PubMed:17548373}; EC=3.2.1.119; Flags: Precursor; Fragment;","A0A5N5EV69_9ROSA SubName: Full=Vicianin hydrolase-like {ECO:0000313|EMBL:KAB2594667.1};","Beta-glucosidase, lactase phlorizinhydrolase, and related proteins","GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0050392,vicianin beta-glucosidase activity; GO:0016052,carbohydrate catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0008422,beta-glucosidase activity; GO:0015926,glucosidase activity; GO:0005975,carbohydrate metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process","PF00232.21:Glycosyl hydrolase family 1","--","--","--"]
["MS09G01450",117.1396,129.6334,130.3809,49.3462,48.9321,71.7218,44.8893,32.4205,55.9124,71.5351,89.5844,87.1757,63.0355,92.1095,67.3141,2901,3200,3163,894,1059,1492,844,570,1251,1438,1899,2185,1225,1785,1307,-0.419082799,0.000506709,0.001542892,false,-0.470540065,0.005435855,0.010976131,false,-0.942224923,"7.86378E-08","3.62586E-07",false,-1.224399144,"4.96486E-10","2.85751E-09","down",-0.791688479,0.000157469,0.00086103,false,-0.737824477,0.001569801,0.009617246,false,-0.282903933,0.235378373,0.691723202,false,-0.506492395,0.005845341,0.026093127,false,-0.446897253,0.038689994,0.18024358,false,"chr_009",2135643,2139497,"-","MS09G01450","--","K02863 large subunit ribosomal protein L1 | (RefSeq) 50S ribosomal protein L1, chloroplastic-like (A)","ko03010: Ribosome","50S ribosomal protein L1, chloroplastic-like [Malus domestica]","RK1_ARATH RecName: Full=50S ribosomal protein L1, chloroplastic; AltName: Full=CL1; Flags: Precursor;","A0A498JJ89_MALDO RecName: Full=Ribosomal protein {ECO:0000256|RuleBase:RU000659};","50S ribosomal protein L1","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0009535,chloroplast thylakoid membrane; GO:0005829,cytosol; GO:0022625,cytosolic large ribosomal subunit; GO:0005634,nucleus; GO:0003729,mRNA binding; GO:0003723,RNA binding; GO:0019843,rRNA binding; GO:0003735,structural constituent of ribosome; GO:0000470,maturation of LSU-rRNA; GO:0006412,translation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0006139,nucleobase-containing compound metabolic process; GO:0006364,rRNA processing; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016072,rRNA metabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0034470,ncRNA processing; GO:0034641,cellular nitrogen compound metabolic process; GO:0034660,ncRNA metabolic process; GO:0042254,ribosome biogenesis; GO:0042273,ribosomal large subunit biogenesis; GO:0043170,macromolecule metabolic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006518,peptide metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0019538,protein metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0009534,chloroplast thylakoid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane; GO:0005840,ribosome; GO:0015934,large ribosomal subunit; GO:0022626,cytosolic ribosome; GO:0032991,protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0044391,ribosomal subunit; GO:1990904,ribonucleoprotein complex","PF00687.24:Ribosomal protein L1p/L10e family","--","--","--"]
["MS09G01990",6.2618,7.3774,6.0769,6.5606,6.4583,8.2393,8.4649,7.3697,8.8233,3.6542,4.3557,4.2333,5.5911,4.6065,4.7028,304,357,289,233,274,336,312,254,387,144,181,208,213,175,179,-0.503003149,0.004220507,0.010245643,false,-0.110817561,0.554326049,0.630463169,false,0.318388706,0.08229107,0.123656635,false,0.603671775,0.000513687,0.001255933,false,1.119816321,"2.89585E-11","5.93076E-10","up",0.730645917,"6.38871E-05",0.000663479,false,0.283684882,0.100348194,0.529608001,false,0.838590677,"3.59256E-06","5.08893E-05",false,0.454924372,0.017773395,0.107563967,false,"chr_009",2949373,2951448,"+","MS09G01990","--","K15032 mTERF domain-containing protein, mitochondrial | (RefSeq) transcription termination factor MTERF4, chloroplastic (A)","--","transcription termination factor MTERF4, chloroplastic [Malus sylvestris]","MTEF4_ARATH RecName: Full=Transcription termination factor MTERF4, chloroplastic {ECO:0000305}; AltName: Full=Mitochondrial transcription termination factor 4 {ECO:0000303|PubMed:23087700}; AltName: Full=Protein BELAYA SMERT' {ECO:0000303|PubMed:21464319}; AltName: Full=Protein RUGOSA2 {ECO:0000303|PubMed:21790815}; Flags: Precursor;","A0A6P5RGA4_PRUAV SubName: Full=transcription termination factor MTERF4, chloroplastic {ECO:0000313|RefSeq:XP_021801994.1};","Mitochondrial transcription termination factor, mTERF","GO:0009507,chloroplast; GO:0005739,mitochondrion; GO:0009536,plastid; GO:0003690,double-stranded DNA binding; GO:0003729,mRNA binding; GO:0032502,developmental process; GO:0006353,DNA-templated transcription termination; GO:0009793,embryo development ending in seed dormancy; GO:0042794,plastid rRNA transcription; GO:0042793,plastid transcription; GO:0006355,regulation of DNA-templated transcription; GO:0008380,RNA splicing; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003723,RNA binding; GO:0008150,biological_process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0009303,rRNA transcription; GO:0016072,rRNA metabolic process; GO:0034660,ncRNA metabolic process; GO:0098781,ncRNA transcription; GO:0009889,regulation of biosynthetic process; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0080090,regulation of primary metabolic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0006396,RNA processing; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02536.17:mTERF","mTERF","TR","mTERF"]
["MS09G03240",4.9695,3.498,3.5593,38.1291,29.3042,32.0614,33.3618,26.0806,22.1795,24.736,20.7416,26.0556,32.8902,35.3384,38.8998,124,87,87,696,639,672,632,462,500,501,443,658,644,690,761,2.760598363,"7.99159E-36","5.67691E-34","up",3.44381951,"6.37064E-72","1.02266E-69","up",3.260120887,"2.95062E-48","2.5255E-46","up",3.049281952,"6.80817E-33","2.01937E-31","up",0.300990849,0.179720291,0.308747177,false,-0.381724835,0.060493289,0.164912894,false,-0.214294048,0.339446294,0.771882933,false,0.51756587,0.005897483,0.026289548,false,-0.159759182,0.332900553,0.623679454,false,"chr_009",4844987,4855725,"+","MS09G03240","--","K19784 chromate reductase, NAD(P)H dehydrogenase (quinone) | (RefSeq) LOW QUALITY PROTEIN: NADPH:quinone oxidoreductase (A)","--","hypothetical protein DVH24_015862 [Malus domestica]","NQR_ARATH RecName: Full=NADPH:quinone oxidoreductase; EC=1.6.5.2;","A0A498JG12_MALDO RecName: Full=NAD(P)H dehydrogenase (quinone) {ECO:0000256|ARBA:ARBA00012648}; EC=1.6.5.2 {ECO:0000256|ARBA:ARBA00012648};","Predicted flavoprotein","GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0005829,cytosol; GO:0005886,plasma membrane; GO:0010181,FMN binding; GO:0050136,NADH dehydrogenase (quinone) activity; GO:0008753,NADPH dehydrogenase (quinone) activity; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0032553,ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0003954,NADH dehydrogenase activity; GO:0003955,NAD(P)H dehydrogenase (quinone) activity; GO:0016491,oxidoreductase activity; GO:0016651,oxidoreductase activity, acting on NAD(P)H; GO:0016655,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma; GO:0016020,membrane; GO:0071944,cell periphery","PF03358.18:NADPH-dependent FMN reductase","--","--","--"]
["MS09G04560",6.8286,6.8036,7.019,0.1931,0.2156,0.9531,0.1551,0.1327,0.3388,1.5665,2.9986,1.745,1.2903,1.4143,0.9911,290,288,292,6,8,34,5,4,13,54,109,75,43,47,33,-1.534388842,"1.68403E-09","1.33168E-08","down",-2.189253726,"1.61909E-22","2.88265E-21","down",-3.724222892,"5.78437E-15","6.19983E-14","down",-4.715850345,"4.95589E-36","1.73456E-34","down",-3.189174062,"4.57851E-10","7.85369E-09","down",-2.528685215,"7.91664E-07","1.49032E-05","down","NA","NA","NA","NA",-2.18405256,0.00027042,0.002109257,"down",-1.517839191,0.011469759,0.079182758,false,"chr_009",6855746,6857561,"-","MS09G04560","--","K21995 cytochrome P450 family 77 subfamily A [EC:1.14.-.-] | (RefSeq) cytochrome P450 77A3-like (A)","ko00073: Cutin, suberine and wax biosynthesis","hypothetical protein C1H46_031965 [Malus baccata]","C77A3_SOYBN RecName: Full=Cytochrome P450 77A3; EC=1.14.-.-;","A0A498JBJ1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH93098.1};","Cytochrome P450 CYP2 subfamily","GO:0016020,membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0004497,monooxygenase activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS09G05250",3.8845,4.4124,3.4411,1.5359,0.9551,2.0638,1.4377,0.9949,2.8072,0.9888,1.5377,2.0301,1.3092,1.4769,0.778,121,137,105,35,26,54,34,22,79,25,41,64,32,36,19,-1.176014544,0.000154417,0.000531902,"down",-1.427777965,"7.03008E-06","2.4207E-05","down",-1.166289425,0.000373681,0.000952379,"down",-0.886369448,0.017927624,0.032204989,false,0.307585961,0.511439403,0.654652834,false,0.555673104,0.240165594,0.430753936,false,0.279561028,0.553776503,0.875483238,false,0.030903977,0.942044128,0.971334375,false,0.284810175,0.508653804,0.764249032,false,"chr_009",7920808,7922139,"-","MS09G05250","--","K19041 E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27] | (RefSeq) RING-H2 finger protein ATL16-like (A)","--","hypothetical protein DVH24_013751 [Malus domestica]","ATL52_ARATH RecName: Full=RING-H2 finger protein ATL52; EC=2.3.2.27 {ECO:0000305}; AltName: Full=RING-type E3 ubiquitin transferase ATL52 {ECO:0000305};","A0A498JE91_MALDO RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483}; EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};","FOG: Predicted E3 ubiquitin ligase","GO:0016021,integral component of membrane; GO:0046872,metal ion binding; GO:0016740,transferase activity; GO:0016567,protein ubiquitination; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF13639.9:Ring finger domain","--","--","--"]
["MS09G06870",0.3702,1.8572,3.2125,0.7591,1.6946,0.8815,2.9259,0.7823,2.6637,2.0525,4.9742,5.853,2.5949,4.0216,3.3055,2,10,17,3,8,4,12,3,13,9,23,32,11,17,14,1.434375339,0.05340478,0.093437812,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-0.895112763,0.183475189,0.313676058,false,"NA","NA","NA","NA","NA","NA","NA","NA",-1.873674294,0.009348451,0.038177884,"down","NA","NA","NA","NA","chr_009",11477905,11478351,"-","MS09G06870","--","--","--","hypothetical protein D8674_020273 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5HFM5_9ROSA RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};","--","GO:0016021,integral component of membrane; GO:0003676,nucleic acid binding; GO:0004523,RNA-DNA hybrid ribonuclease activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004518,nuclease activity; GO:0004519,endonuclease activity; GO:0004521,endoribonuclease activity; GO:0004540,ribonuclease activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016891,endoribonuclease activity, producing 5'-phosphomonoesters; GO:0016893,endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF13456.9:Reverse transcriptase-like","--","--","--"]
["MS09G08200",4.2458,4.8681,3.034,0.0829,0.0694,0.0722,0,0,0,1.7934,1.7716,1.0788,0.5411,0.7751,0.3868,70,80,49,1,1,1,0,0,0,24,25,18,7,10,5,-1.213399585,0.001684595,0.004506742,"down",-2.546504229,"9.36514E-08","4.22553E-07","down",-5.555155347,"1.9796E-09","1.14383E-08","down",-7.878835898,"3.01563E-10","1.7783E-09","down",-6.660035167,"6.14927E-07","5.97184E-06","down","NA","NA","NA","NA","NA","NA","NA","NA",-4.331352489,"1.86831E-05",0.000214271,"down","NA","NA","NA","NA","chr_009",14397735,14400213,"-","MS09G08200","--","K25796 plant-specific transcription factor YABBY family protein | (RefSeq) axial regulator YABBY 1-like (A)","--","axial regulator YABBY 1-like [Malus domestica]","YAB1_ARATH RecName: Full=Axial regulator YABBY 1; AltName: Full=Fl-54; AltName: Full=Protein ABNORMAL FLORAL ORGANS; AltName: Full=Protein FILAMENTOUS FLOWER; AltName: Full=Protein antherless;","D9ZJG4_MALDO SubName: Full=YABBY domain class transcription factor {ECO:0000313|EMBL:ADL36867.1};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0000976,transcription cis-regulatory region binding; GO:0010158,abaxial cell fate specification; GO:0045165,cell fate commitment; GO:0010154,fruit development; GO:0010450,inflorescence meristem growth; GO:0009933,meristem structural organization; GO:0009944,polarity specification of adaxial/abaxial axis; GO:0009909,regulation of flower development; GO:2000024,regulation of leaf development; GO:1902183,regulation of shoot apical meristem development; GO:0010093,specification of floral organ identity; GO:0090706,specification of plant organ position; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0001708,cell fate specification; GO:0008150,biological_process; GO:0009987,cellular process; GO:0030154,cell differentiation; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0009791,post-embryonic development; GO:0009888,tissue development; GO:0010229,inflorescence development; GO:0035266,meristem growth; GO:0040007,growth; GO:0048367,shoot system development; GO:0048507,meristem development; GO:0048589,developmental growth; GO:0090567,reproductive shoot system development; GO:0009653,anatomical structure morphogenesis; GO:0048532,anatomical structure arrangement; GO:0003002,regionalization; GO:0007389,pattern specification process; GO:0009798,axis specification; GO:0009943,adaxial/abaxial axis specification; GO:0009955,adaxial/abaxial pattern specification; GO:0065001,specification of axis polarity; GO:0009908,flower development; GO:0048580,regulation of post-embryonic development; GO:0048831,regulation of shoot system development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0065007,biological regulation; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:0048366,leaf development; GO:0048827,phyllome development; GO:0099402,plant organ development; GO:0048509,regulation of meristem development; GO:1902182,shoot apical meristem development; GO:0048437,floral organ development; GO:0048444,floral organ morphogenesis; GO:0048449,floral organ formation; GO:0048646,anatomical structure formation involved in morphogenesis; GO:0090696,post-embryonic plant organ development; GO:0090697,post-embryonic plant organ morphogenesis; GO:0090698,post-embryonic plant morphogenesis; GO:0090701,specification of plant organ identity; GO:1905392,plant organ morphogenesis; GO:1905393,plant organ formation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF04690.16:YABBY protein","C2C2-YABBY","TF","C2C2->C2C2-YABBY"]
["MS09G08770",1.3696,1.374,1.4758,2.1842,1.306,1.6305,2.2049,3.3225,6.2322,1.3123,0.7111,0.3007,1.5514,1.1668,0,18,18,19,21,15,18,22,31,74,14,8,4,16,12,0,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",1.754734199,0.000196272,0.000515774,"up",2.449177865,0.00011867,0.000669899,"up",2.099035024,0.007804229,0.035070873,"up",1.270909339,0.010976879,0.210734414,false,"NA","NA","NA","NA","NA","NA","NA","NA","chr_009",16424455,16425146,"-","MS09G08770","--","--","--","protein LITTLE ZIPPER 1-like [Malus sylvestris]","ZPR1_ARATH RecName: Full=Protein LITTLE ZIPPER 1 {ECO:0000303|PubMed:18055602};","A0A498JCS1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH93538.1};","--","GO:0009943,adaxial/abaxial axis specification; GO:0010358,leaf shaping; GO:0003002,regionalization; GO:0007275,multicellular organism development; GO:0007389,pattern specification process; GO:0008150,biological_process; GO:0009798,axis specification; GO:0009955,adaxial/abaxial pattern specification; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0009653,anatomical structure morphogenesis; GO:0009965,leaf morphogenesis; GO:0010016,shoot system morphogenesis; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048532,anatomical structure arrangement; GO:0048731,system development; GO:0048827,phyllome development; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis","--","--","--","--"]
["MS09G10270",19.4778,19.4143,22.6421,76.8747,59.2869,67.4563,63.7152,56.201,59.2053,45.6411,45.7667,54.2143,57.1603,62.3608,56.9026,1694,1683,1929,4891,4506,4928,4207,3470,4652,3222,3407,4772,3901,4244,3880,1.431312215,"6.86832E-27","2.73171E-25","up",1.813439231,"1.07231E-55","9.96004E-54","up",1.94157847,"1.31989E-37","7.08367E-36","up",1.827554876,"1.30653E-44","6.53265E-43","up",0.408876831,0.002839107,0.010628318,false,0.028551153,0.817756126,0.899941783,false,-0.115978816,0.444061778,0.82725315,false,0.527861163,0.000737261,0.0048626,false,0.152835429,0.288734764,0.581814247,false,"chr_009",20606814,20614051,"-","MS09G10270","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1-like (A)","ko04626: Plant-pathogen interaction","U-box domain-containing protein 33 [Malus domestica]","PUB33_ARATH RecName: Full=U-box domain-containing protein 33; AltName: Full=Plant U-box protein 33; Includes: RecName: Full=E3 ubiquitin ligase; EC=2.3.2.27; AltName: Full=RING-type E3 ubiquitin transferase {ECO:0000305}; Includes: RecName: Full=Serine/threonine-protein kinase; EC=2.7.11.-;","A0A540N701_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE06779.1};","--","GO:0005829,cytosol; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004842,ubiquitin-protein transferase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0019787,ubiquitin-like protein transferase activity; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF00069.28:Protein kinase domain","--","--","--"]
["MS09G11310",128.5153,150.0359,156.7563,187.2624,159.933,187.3014,158.7232,103.103,88.1809,324.4408,274.3629,383.1544,276.297,335.9528,307.0045,1668,1941,1993,1778,1814,2042,1564,950,1034,3418,3048,5033,2814,3412,3124,1.364728782,"5.16891E-15","7.75756E-14","up",1.371046324,"2.16482E-25","4.73997E-24","up",0.509961588,0.000210635,0.000562032,false,-0.021710827,0.930396666,0.947142787,false,-1.374741797,"2.24087E-07","2.40295E-06","down",-1.380662318,"1.11003E-08","3.15701E-07","down",-0.536842431,0.033235434,0.344938027,false,-0.836021475,"1.78612E-06","2.74811E-05",false,-0.836119027,"4.84901E-10","6.49298E-08",false,"chr_009",22429887,22432079,"-","MS09G11310","--","K14496 abscisic acid receptor PYR/PYL family | (RefSeq) abscisic acid receptor PYL3-like (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction","abscisic acid receptor PYL3-like [Malus domestica]","PYL3_ORYSJ RecName: Full=Abscisic acid receptor PYL3 {ECO:0000305}; AltName: Full=PYR1-like protein 10 {ECO:0000303|PubMed:24743650}; Short=OsPYL10 {ECO:0000303|PubMed:24743650}; AltName: Full=PYR1-like protein 3 {ECO:0000303|PubMed:22071266}; Short=OsPYL3 {ECO:0000303|PubMed:22071266}; AltName: Full=Regulatory components of ABA receptor 3 {ECO:0000305};","A0A498JAK9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH92849.1};","--","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005634,nucleus; GO:0010427,abscisic acid binding; GO:0004864,protein phosphatase inhibitor activity; GO:0038023,signaling receptor activity; GO:0009738,abscisic acid-activated signaling pathway; GO:1905183,negative regulation of protein serine/threonine phosphatase activity; GO:0080163,regulation of protein serine/threonine phosphatase activity; GO:0009409,response to cold; GO:0009414,response to water deprivation; GO:0009845,seed germination; GO:0003674,molecular_function; GO:0005488,binding; GO:0008289,lipid binding; GO:0019840,isoprenoid binding; GO:0031406,carboxylic acid binding; GO:0033293,monocarboxylic acid binding; GO:0036094,small molecule binding; GO:0042562,hormone binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0043177,organic acid binding; GO:0043178,alcohol binding; GO:0004857,enzyme inhibitor activity; GO:0019208,phosphatase regulator activity; GO:0019212,phosphatase inhibitor activity; GO:0019888,protein phosphatase regulator activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0060089,molecular transducer activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006470,protein dephosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009892,negative regulation of metabolic process; GO:0010563,negative regulation of phosphorus metabolic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0010921,regulation of phosphatase activity; GO:0010923,negative regulation of phosphatase activity; GO:0016311,dephosphorylation; GO:0019220,regulation of phosphate metabolic process; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031399,regulation of protein modification process; GO:0031400,negative regulation of protein modification process; GO:0032515,negative regulation of phosphoprotein phosphatase activity; GO:0035303,regulation of dephosphorylation; GO:0035304,regulation of protein dephosphorylation; GO:0035305,negative regulation of dephosphorylation; GO:0035308,negative regulation of protein dephosphorylation; GO:0036211,protein modification process; GO:0043086,negative regulation of catalytic activity; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043666,regulation of phosphoprotein phosphatase activity; GO:0044092,negative regulation of molecular function; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0045936,negative regulation of phosphate metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050790,regulation of catalytic activity; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051174,regulation of phosphorus metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051248,negative regulation of protein metabolic process; GO:0051336,regulation of hydrolase activity; GO:0051346,negative regulation of hydrolase activity; GO:0060255,regulation of macromolecule metabolic process; GO:0065009,regulation of molecular function; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:0010035,response to inorganic substance; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0090351,seedling development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF10604.12:Polyketide cyclase / dehydrase and lipid transport","--","--","--"]
["MS09G12240",4.9256,4.1665,4.0917,5.512,5.0286,5.519,4.3571,5.5778,6.4943,2.9747,2.7927,2.9106,3.0155,3.2708,3.4801,204,172,166,167,182,192,137,164,243,100,99,122,98,106,113,-0.417326007,0.041334067,0.074956114,false,-0.142909234,0.481384337,0.561757701,false,0.496464475,0.009538592,0.018261762,false,0.596226146,0.006376968,0.01265947,false,1.027752801,"5.58362E-06","4.39846E-05","up",0.7559367,0.000752239,0.005249204,false,0.09979445,0.64198874,0.905919634,false,0.93153253,"2.17781E-06","3.27618E-05",false,0.664335096,0.000605076,0.009091486,false,"chr_009",23886039,23888580,"-","MS09G12240","--","--","--","protein IQ-DOMAIN 1-like [Malus domestica]","IQD17_ARATH RecName: Full=Protein IQ-DOMAIN 17 {ECO:0000303|PubMed:16368012}; Short=AtIQD17 {ECO:0000303|PubMed:16368012};","A0A498JDQ0_MALDO RecName: Full=DUF4005 domain-containing protein {ECO:0000259|Pfam:PF13178};","--","GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0005886,plasma membrane; GO:0005516,calmodulin binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0016020,membrane; GO:0071944,cell periphery","PF13178.9:Protein of unknown function (DUF4005)","--","--","--"]
["MS09G13420",10.2255,8.549,7.6972,3.8828,3.4276,5.8408,2.9251,4.2193,2.8582,3.563,5.1285,4.6946,4.3437,3.5639,3.9523,198,165,146,55,58,95,43,58,50,56,85,92,66,54,60,-0.801866712,0.000851159,0.002451282,false,-0.867440061,0.000379487,0.000968791,false,-0.805285379,0.003703697,0.007762883,false,-1.127000238,"6.80598E-05",0.000194037,"down",-0.310576351,0.315810906,0.46694064,false,-0.243830493,0.430383482,0.622124804,false,-0.319092297,0.343017764,0.773747065,false,0.013391881,0.964666196,0.982052734,false,0.08661357,0.772182088,0.910853581,false,"chr_009",26033515,26034342,"+","MS09G13420","--","K14486 auxin response factor | (RefSeq) LOW QUALITY PROTEIN: auxin response factor 19-like (A)","ko04075: Plant hormone signal transduction","auxin response factor 18-like [Malus domestica]","ARFP_ARATH RecName: Full=Auxin response factor 16;","A0A498JK04_MALDO RecName: Full=Auxin response factor {ECO:0000256|RuleBase:RU004561};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0035198,miRNA binding; GO:0009734,auxin-activated signaling pathway; GO:0051301,cell division; GO:0007389,pattern specification process; GO:0009733,response to auxin; GO:0048829,root cap development; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0003723,RNA binding; GO:0061980,regulatory RNA binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0022622,root system development; GO:0048364,root development; GO:0048731,system development; GO:0099402,plant organ development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02362.24:B3 DNA binding domain","B3","TF","B3->B3"]
["MS09G14460",18.3416,18.9394,21.4978,28.4448,30.0711,26.8582,31.6001,37.5706,28.0584,47.3955,32.4141,36.387,50.1195,45.1427,41.6813,513,528,589,582,735,631,671,746,709,1076,776,1030,1100,988,914,1.179979244,"7.75431E-09","5.57808E-08","up",1.515985669,"2.4897E-25","5.44325E-24","up",0.757912688,"1.04126E-06","4.08883E-06",false,1.01532193,"3.22599E-08","1.48382E-07","up",-0.151244576,0.515312684,0.657858684,false,-0.486603124,0.008993017,0.039154147,false,0.253887748,0.202889973,0.660710191,false,-0.402888628,0.066465754,0.171199792,false,-0.731576105,"1.11364E-05",0.0003653,false,"chr_009",27546578,27549772,"+","MS09G14460","--","K18368 caffeoylshikimate esterase [EC:3.1.1.-] | (RefSeq) caffeoylshikimate esterase-like (A)","ko00940: Phenylpropanoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","caffeoylshikimate esterase-like [Malus domestica]","CSE_ARATH RecName: Full=Caffeoylshikimate esterase; EC=3.1.1.-; AltName: Full=Lysophospholipase 2; Short=LysoPL2;","A0A498JEU5_MALDO RecName: Full=Hydrolase_4 domain-containing protein {ECO:0000259|Pfam:PF12146};","Lysophospholipase","GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0016020,membrane; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0003846,2-acylglycerol O-acyltransferase activity; GO:0090430,caffeoyl-CoA: alcohol caffeoyl transferase activity; GO:0016787,hydrolase activity; GO:0016298,lipase activity; GO:0004622,lysophospholipase activity; GO:0009809,lignin biosynthetic process; GO:0046686,response to cadmium ion; GO:0042542,response to hydrogen peroxide; GO:0006979,response to oxidative stress; GO:0010043,response to zinc ion; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008374,O-acyltransferase activity; GO:0016411,acylglycerol O-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0016788,hydrolase activity, acting on ester bonds; GO:0004620,phospholipase activity; GO:0052689,carboxylic ester hydrolase activity; GO:0006725,cellular aromatic compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009698,phenylpropanoid metabolic process; GO:0009699,phenylpropanoid biosynthetic process; GO:0009808,lignin metabolic process; GO:0009987,cellular process; GO:0019438,aromatic compound biosynthetic process; GO:0019748,secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044550,secondary metabolite biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0000302,response to reactive oxygen species; GO:0006950,response to stress; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF12146.11:Serine aminopeptidase, S33","--","--","--"]
["MS09G14770",2.3999,0.7004,1.1581,67.5199,88.4772,32.3624,146.4435,167.9173,122.9644,41.0699,17.0264,21.6861,68.0057,41.877,44.0227,55,16,26,1132,1772,623,2548,2732,2546,764,334,503,1223,751,791,4.429983962,"1.21607E-21","3.36164E-20","up",5.468405814,"1.06287E-49","7.80947E-48","up",5.697930124,"1.26391E-32","5.11505E-31","up",6.967442496,"5.8442E-88","1.30726E-85","up",2.552182337,"8.05838E-14","2.29136E-12","up",1.512645431,"6.86958E-10","2.53808E-08","up",1.262890447,0.000591564,0.043970469,"up",1.290336991,0.003638869,0.017843597,"up",0.257826316,0.49663928,0.755154868,false,"chr_009",27944816,27945795,"+","MS09G14770","--","--","--","zinc finger protein ZAT12-like [Malus domestica]","ZAT5_ARATH RecName: Full=Zinc finger protein ZAT5;","A0A498JLD2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH94422.1};","FOG: Zn-finger","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0000976,transcription cis-regulatory region binding; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13912.9:C2H2-type zinc finger","C2H2","TF","C2H2"]
["MS09G15860",38.1312,31.6061,30.8164,10.2697,12.5966,14.0238,11.2111,15.7299,13.8175,18.0078,15.2737,13.0073,12.5532,21.3191,23.7968,1680,1388,1330,331,485,519,375,492,550,644,576,580,434,735,822,-0.929907604,"1.74464E-06","8.69263E-06",false,-0.517371943,0.027842774,0.047438395,false,-1.23487645,"2.58542E-11","1.88702E-10","down",-1.021508348,"1.02858E-07","4.42455E-07","down",-0.078105582,0.722833769,0.821012128,false,-0.488959768,0.059064297,0.16200677,false,0.212146895,0.31983783,0.758174847,false,-0.287795278,0.18291074,0.350569656,false,-0.693243917,0.008044916,0.061769801,false,"chr_009",29453825,29456130,"+","MS09G15860","--","--","--","homeobox protein OTX1-like [Malus domestica]","--","A0A498JFC0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH94539.1};","--","--","--","--","--","--"]
["MS09G16650",6.2897,5.39,5.1723,0.3881,0.4998,0.442,0.374,0.6768,0.5076,1.2377,0.9696,0.561,0.501,0.3907,0.6964,288,246,232,13,20,17,13,22,21,46,38,26,18,14,25,-2.428846752,"2.85537E-15","4.39932E-14","down",-3.117420267,"1.80241E-26","4.26585E-25","down",-3.44281043,"2.61208E-30","9.22935E-29","down",-3.162597766,"1.25656E-25","2.4449E-24","down",-0.723452136,0.136763576,0.250962929,false,-0.023255841,0.962044091,0.980648524,false,"NA","NA","NA","NA",-1.007488939,0.037621205,0.11138435,false,"NA","NA","NA","NA","chr_009",30785453,30789338,"+","MS09G16650","--","K23877 xyloglucan O-acetyltransferase | (RefSeq) protein ALTERED XYLOGLUCAN 4-like (A)","--","protein ESKIMO 1-like [Malus domestica]","TBL29_ARATH RecName: Full=Xylan O-acetyltransferase 1 {ECO:0000303|PubMed:30083810}; EC=2.3.1.- {ECO:0000269|PubMed:30083810}; AltName: Full=Protein ESKIMO 1 {ECO:0000303|PubMed:17316173}; AltName: Full=Protein trichome birefringence-like 29 {ECO:0000303|PubMed:23340742};","A0A498JHV1_MALDO RecName: Full=PMR5N domain-containing protein {ECO:0000259|Pfam:PF14416};","--","GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0016413,O-acetyltransferase activity; GO:1990538,xylan O-acetyltransferase activity; GO:0045893,positive regulation of DNA-templated transcription; GO:0009409,response to cold; GO:0050826,response to freezing; GO:0045492,xylan biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008374,O-acyltransferase activity; GO:0016407,acetyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006355,regulation of DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010410,hemicellulose metabolic process; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0042546,cell wall biogenesis; GO:0044036,cell wall macromolecule metabolic process; GO:0044038,cell wall macromolecule biosynthetic process; GO:0044085,cellular component biogenesis; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0045491,xylan metabolic process; GO:0070589,cellular component macromolecule biosynthetic process; GO:0070592,cell wall polysaccharide biosynthetic process; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane","PF13839.9:GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p","--","--","--"]
["MS09G17470",7.2694,6.9947,6.2252,1.5757,1.3616,2.2798,1.2,1.0475,1.4405,3.5274,5.0175,3.9128,2.3693,2.0195,2.6796,391,375,328,62,64,103,49,40,70,154,231,213,100,85,113,-0.537902156,0.003932019,0.009611639,false,-1.244687733,"2.56317E-10","1.59118E-09","down",-1.76809795,"5.8094E-14","5.65301E-13","down",-2.189575872,"3.0667E-23","5.13418E-22","down",-1.639958305,"5.29127E-11","1.04161E-09","down",-0.929805339,0.00048178,0.003614065,false,-0.423395968,0.162362608,0.617303696,false,-1.215261933,"4.33885E-06","5.9877E-05","down",-0.499459433,0.069980026,0.262134363,false,"chr_009",31454893,31459083,"+","MS09G17470","--","K03549 KUP system potassium uptake protein | (RefSeq) LOW QUALITY PROTEIN: potassium transporter 2-like (A)","--","LOW QUALITY PROTEIN: potassium transporter 2-like [Malus domestica]","POT2_ARATH RecName: Full=Potassium transporter 2; Short=AtKT2; Short=AtKUP2; Short=AtPOT2;","A0A498JGR7_MALDO RecName: Full=Potassium transporter {ECO:0000256|RuleBase:RU321113};","--","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0005886,plasma membrane; GO:0015079,potassium ion transmembrane transporter activity; GO:0006813,potassium ion transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0046873,metal ion transmembrane transporter activity; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0008150,biological_process; GO:0030001,metal ion transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF02705.19:K+ potassium transporter","--","--","--"]
["MS09G18090",0.6008,0.295,0.3654,0.0874,0.1902,0.1674,0.2863,0.108,0.2405,0.3622,0.2539,0.3158,0.0977,0.4248,0.1141,47,23,28,5,13,11,17,6,17,23,17,25,6,26,7,-0.249139378,0.583664131,0.674350344,false,-0.704063225,0.265609735,0.341338094,false,-1.277170844,0.022744468,0.039739758,"down",-0.706426521,0.190757878,0.257488515,false,-0.443357547,0.408831327,0.560648001,false,"NA","NA","NA","NA","NA","NA","NA","NA",-1.008777789,0.07196178,0.181461343,false,"NA","NA","NA","NA","chr_009",32091961,32106976,"-","MS09G18090","--","--","--","LOW QUALITY PROTEIN: ATP-dependent DNA helicase SRS2-like protein At4g25120 [Malus sylvestris]","SRS2L_ARATH RecName: Full=ATP-dependent DNA helicase SRS2-like protein At4g25120; EC=3.6.4.12; AltName: Full=AtSRS2;","A0A5N5F5D1_9ROSA RecName: Full=DNA helicase {ECO:0000256|ARBA:ARBA00012551}; EC=3.6.4.12 {ECO:0000256|ARBA:ARBA00012551};","3'-5' DNA helicase","GO:0005634,nucleus; GO:0043138,3'-5' DNA helicase activity; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0003677,DNA binding; GO:0003678,DNA helicase activity; GO:0006310,DNA recombination; GO:0036292,DNA rewinding; GO:0000725,recombinational repair; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004386,helicase activity; GO:0008094,ATP-dependent activity, acting on DNA; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0140657,ATP-dependent activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0003676,nucleic acid binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006996,organelle organization; GO:0016043,cellular component organization; GO:0032392,DNA geometric change; GO:0051276,chromosome organization; GO:0071103,DNA conformation change; GO:0071840,cellular component organization or biogenesis; GO:0006281,DNA repair; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0033554,cellular response to stress; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00580.24:UvrD/REP helicase N-terminal domain","--","--","--"]
["MS09G18150",4.2137,3.836,2.4694,0.96,0,1.3005,0.1028,0.3297,1.2092,1.5381,2.0968,1.2336,0.1989,0.7978,0.9953,54,49,31,9,0,14,1,3,14,16,23,16,2,8,10,-0.939481686,0.028013077,0.053677502,false,-2.119951977,0.00019448,0.000524312,"down",-2.046165597,0.008316603,0.016159057,"down",-2.380727281,0.000509097,0.001246144,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_009",32272355,32273187,"-","MS09G18150","--","--","--","mavicyanin [Pyrus x bretschneideri]","BCP_PEA RecName: Full=Blue copper protein; Flags: Precursor;","A0A5N5F171_9ROSA SubName: Full=Mavicyanin {ECO:0000313|EMBL:KAB2596473.1};","--","GO:0009055,electron transfer activity; GO:0046872,metal ion binding; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding","PF02298.20:Plastocyanin-like domain","--","--","--"]
["MS09G18810",17.6346,13.6184,11.828,4.0177,9.7398,2.245,6.4,10.0749,6.9953,8.2465,2.5207,2.5683,6.7982,4.1685,5.699,1038,799,682,173,501,111,286,421,372,394,127,153,314,192,263,-1.4807862,0.000921996,0.002629913,"down",-1.078201949,"1.00533E-05","3.37474E-05","down",-1.187289903,0.012744198,0.023673133,"down",-0.593366194,0.019965026,0.035470859,false,0.904466545,0.054911126,0.123666491,false,0.500245586,0.064094191,0.171901391,false,0.586441345,0.236203263,0.692713912,false,0.316652051,0.709988202,0.834967068,false,-0.077945812,0.872790442,0.953645837,false,"chr_009",32783687,32788477,"+","MS09G18810","--","K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] | (RefSeq) LOW QUALITY PROTEIN: trehalose-phosphate phosphatase A (A)","ko00500: Starch and sucrose metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","trehalose-phosphate phosphatase A-like isoform X1 [Malus sylvestris]","TPPA_ARATH RecName: Full=Trehalose-phosphate phosphatase A; Short=AtTPPA; EC=3.1.3.12; AltName: Full=Trehalose 6-phosphate phosphatase;","A0A498JM61_MALDO RecName: Full=Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};","Trehalose-6-phosphate synthase component TPS1 and related subunits","GO:0004805,trehalose-phosphatase activity; GO:0005992,trehalose biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0019203,carbohydrate phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0005975,carbohydrate metabolic process; GO:0005984,disaccharide metabolic process; GO:0005991,trehalose metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009311,oligosaccharide metabolic process; GO:0009312,oligosaccharide biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044262,cellular carbohydrate metabolic process; GO:0046351,disaccharide biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process","PF02358.19:Trehalose-phosphatase","--","--","--"]
["MS09G19890",8.9301,9.9068,7.144,12.6767,5.8954,9.149,7.7474,6.8942,14.9217,3.9141,3.0597,4.4118,2.6809,3.4566,3.9428,208,230,163,216,120,179,137,114,314,74,61,104,49,63,72,-1.000720034,"9.38897E-05",0.000337863,"down",-1.078761463,"1.96739E-05","6.28972E-05","down",0.29802863,0.338091763,0.417668336,false,0.454257738,0.144180385,0.202797336,false,1.472449489,"1.60294E-05",0.000113436,"up",1.552629783,"3.69932E-06","5.68099E-05","up",0.159038085,0.668077866,0.914427045,false,1.316915802,"7.36311E-05",0.000702341,"up",1.399682081,"1.87658E-05",0.000564767,"up","chr_009",34356389,34358668,"-","MS09G19890","--","--","--","remorin-like [Malus domestica]","REMO_SOLTU RecName: Full=Remorin; AltName: Full=pp34;","A0A540MYP9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE03926.1};","--","GO:0005886,plasma membrane; GO:0048032,galacturonate binding; GO:0007267,cell-cell signaling; GO:0003674,molecular_function; GO:0005488,binding; GO:0031406,carboxylic acid binding; GO:0033293,monocarboxylic acid binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0007154,cell communication; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF03763.16:Remorin, C-terminal region","--","--","--"]
["MS09G20940",9.7228,10.9382,10.1663,7.2906,9.6136,6.6303,9.1387,13.1637,9.6648,28.1432,13.2339,14.7833,22.3748,16.3457,27.1503,206,231,211,113,178,118,147,198,185,484,240,317,372,271,451,1.068761494,0.000858822,0.00246998,"up",1.387919434,"2.42553E-10","1.50891E-09","up",-0.165934432,0.488029086,0.566391364,false,0.336165924,0.13261104,0.188620121,false,-0.715834506,0.041023961,0.098165836,false,-1.035329553,"6.25526E-05",0.000652476,"down",0.499710565,0.078321015,0.485605245,false,-1.214250073,0.000846363,0.005460282,"down",-1.526776846,"3.52632E-08","2.70755E-06","down","chr_009",35336898,35337929,"-","MS09G20940","--","K01183 chitinase [EC:3.2.1.14] | (RefSeq) hevamine-A (A)","ko00520: Amino sugar and nucleotide sugar metabolism; ko01100: Metabolic pathways","hypothetical protein C1H46_040936 [Malus baccata]","CHLY_HEVBR RecName: Full=Hevamine-A; Includes: RecName: Full=Chitinase; EC=3.2.1.14; Includes: RecName: Full=Lysozyme; EC=3.2.1.17; Flags: Precursor;","A0A540KH43_MALBA RecName: Full=Chitinase {ECO:0000256|ARBA:ARBA00012729}; EC=3.2.1.14 {ECO:0000256|ARBA:ARBA00012729};","Chitinase","GO:0005773,vacuole; GO:0004568,chitinase activity; GO:0003796,lysozyme activity; GO:0006032,chitin catabolic process; GO:0000272,polysaccharide catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0061783,peptidoglycan muralytic activity; GO:0006022,aminoglycan metabolic process; GO:0006026,aminoglycan catabolic process; GO:0006030,chitin metabolic process; GO:0006040,amino sugar metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0043170,macromolecule metabolic process; GO:0046348,amino sugar catabolic process; GO:0071704,organic substance metabolic process; GO:1901071,glucosamine-containing compound metabolic process; GO:1901072,glucosamine-containing compound catabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901136,carbohydrate derivative catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0016052,carbohydrate catabolic process; GO:0044238,primary metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00704.31:Glycosyl hydrolases family 18","--","--","--"]
["MS09G21600",1.5604,1.1182,1.0998,0.4571,0.5102,0.3981,0.3915,0.5756,0.1645,1.0527,0.9549,0.8443,0.7575,0.6647,0.5212,42,30,29,9,12,9,8,11,4,23,22,23,16,14,11,-0.224402419,0.570446368,0.662469582,false,-0.667795657,0.134827411,0.190263113,false,-1.252280947,0.009939266,0.018959568,"down",-1.477443443,0.010201779,0.019379537,"down",-1.242113951,0.039924784,0.096053477,false,"NA","NA","NA","NA","NA","NA","NA","NA",-1.011553567,0.048835476,0.135894449,false,"NA","NA","NA","NA","chr_009",35833143,35835583,"+","MS09G21600","--","K10664 E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27] | (RefSeq) RING-H2 finger protein ATL38-like (A)","--","putative RING-H2 finger protein ATL21B [Malus sylvestris]","AT21B_ARATH RecName: Full=Putative RING-H2 finger protein ATL21B; EC=2.3.2.27 {ECO:0000305}; AltName: Full=RING-type E3 ubiquitin transferase ATL21B {ECO:0000305}; Flags: Precursor;","A0A498JJZ3_MALDO RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};","--","GO:0016021,integral component of membrane; GO:0046872,metal ion binding; GO:0030247,polysaccharide binding; GO:0016740,transferase activity; GO:0016567,protein ubiquitination; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0030246,carbohydrate binding; GO:0003824,catalytic activity; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF13947.9:Wall-associated receptor kinase galacturonan-binding","--","--","--"]
["MS09G22500",78.1288,41.4673,28.2018,16.0451,9.7422,23.0518,16.1472,25.5892,37.7795,14.4844,22.825,7.9925,11.8582,9.9671,8.1012,4047,2141,1431,608,441,1003,635,941,1768,609,1012,419,482,404,329,-1.534535016,0.000260217,0.000848938,"down",-2.017808984,"2.99105E-09","1.63575E-08","down",-1.408203217,0.000474673,0.001186126,"down",-0.633381645,0.102273553,0.150767465,false,0.91493297,0.020296668,0.055177258,false,1.403985896,"2.325E-06","3.79585E-05","up",0.781137485,0.028176536,0.320675265,false,0.137215078,0.730167814,0.847602589,false,0.632554127,0.034445194,0.167089936,false,"chr_009",36832006,36835762,"-","MS09G22500","--","--","--","NAC domain-containing protein 91-like [Malus sylvestris]","NAC91_ARATH RecName: Full=NAC domain-containing protein 91 {ECO:0000303|PubMed:15029955}; Short=ANAC091 {ECO:0000303|PubMed:15029955}; AltName: Full=TCV-interacting protein {ECO:0000303|PubMed:11041886};","D9ZJ91_MALDO SubName: Full=NAC domain class transcription factor {ECO:0000313|EMBL:ADL36794.1};","--","GO:0012505,endomembrane system; GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0003713,transcription coactivator activity; GO:0071456,cellular response to hypoxia; GO:0051607,defense response to virus; GO:0002230,positive regulation of defense response to virus by host; GO:0002237,response to molecule of bacterial origin; GO:0009615,response to virus; GO:0016032,viral process; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0003712,transcription coregulator activity; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0140546,defense response to symbiont; GO:0002831,regulation of response to biotic stimulus; GO:0031347,regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0048583,regulation of response to stimulus; GO:0050688,regulation of defense response to virus; GO:0050691,regulation of defense response to virus by host; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0009617,response to bacterium; GO:0010033,response to organic substance; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF02365.18:No apical meristem (NAM) protein","NAC","TF","NAC"]
["MS10G00150",33.2816,37.7061,40.0403,19.2215,14.5986,18.8684,14.768,12.9597,12.1008,20.4209,23.1077,25.3581,20.7436,23.0867,20.6668,1787,2018,2106,755,685,851,602,494,587,890,1062,1378,874,970,870,-0.501911731,0.000163676,0.000560398,false,-0.489967616,0.000102332,0.00028938,false,-0.863631605,"4.1835E-08","2.00951E-07",false,-1.191824977,"8.7057E-14","7.31417E-13","down",-0.67773296,"3.03817E-05",0.000199589,false,-0.687841713,"1.24899E-05",0.00016443,false,-0.330206455,0.06426084,0.447489124,false,-0.344602124,0.03140017,0.097533277,false,-0.348992101,0.023610289,0.129924554,false,"chr_0010",176612,180859,"+","MS10G00150","--","K00231 protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] | (RefSeq) protoporphyrinogen oxidase 1, chloroplastic (A)","ko00860: Porphyrin metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01240: Biosynthesis of cofactors","protoporphyrinogen oxidase 1, chloroplastic [Malus domestica]","PPOC_ARATH RecName: Full=Protoporphyrinogen oxidase 1, chloroplastic; Short=PPO1; EC=1.3.3.4; Flags: Precursor;","A0A4Y6GN86_MALDO RecName: Full=Protoporphyrinogen oxidase {ECO:0000256|ARBA:ARBA00012867, ECO:0000256|RuleBase:RU367069}; EC=1.3.3.4 {ECO:0000256|ARBA:ARBA00012867, ECO:0000256|RuleBase:RU367069};","Protoporphyrinogen oxidase","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009534,chloroplast thylakoid; GO:0005829,cytosol; GO:0016491,oxidoreductase activity; GO:0004729,oxygen-dependent protoporphyrinogen oxidase activity; GO:0015995,chlorophyll biosynthetic process; GO:0006783,heme biosynthetic process; GO:0006779,porphyrin-containing compound biosynthetic process; GO:0006782,protoporphyrinogen IX biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0016634,oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor; GO:0070818,protoporphyrinogen oxidase activity; GO:0006725,cellular aromatic compound metabolic process; GO:0006778,porphyrin-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0015994,chlorophyll metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0033013,tetrapyrrole metabolic process; GO:0033014,tetrapyrrole biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042440,pigment metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046148,pigment biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0042168,heme metabolic process; GO:0046501,protoporphyrinogen IX metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009579,thylakoid; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment","PF01593.27:Flavin containing amine oxidoreductase","--","--","--"]
["MS10G01160",0.4756,0.5192,0.3427,0.0191,0.064,0.1166,0.1105,0.1182,0.2787,0.0862,0.1634,0.1244,0.1248,0,0.0535,34,37,24,1,4,7,6,6,18,5,10,9,7,0,3,-1.65777698,0.001404641,0.00383203,"down",-2.610056576,0.000411159,0.00104217,"down",-2.514257821,0.000164424,0.000447755,"down",-1.10827639,0.042215451,0.069150406,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",1783477,1788116,"+","MS10G01160","--","K14326 regulator of nonsense transcripts 1 [EC:3.6.4.13 5.6.2.3] | (RefSeq) regulator of nonsense transcripts 1 homolog (A)","ko03013: Nucleocytoplasmic transport; ko03015: mRNA surveillance pathway","hypothetical protein C1H46_039289 [Malus baccata]","MAA3_ARATH RecName: Full=Probable helicase MAGATAMA 3; EC=3.6.4.-; AltName: Full=SEN1-like protein;","A0A540KLT9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD75167.1};","tRNA-splicing endonuclease positive effector (SEN1)","GO:0005634,nucleus; GO:0005524,ATP binding; GO:0004386,helicase activity; GO:0016787,hydrolase activity; GO:0003723,RNA binding; GO:0009553,embryo sac development; GO:0010183,pollen tube guidance; GO:0009875,pollen-pistil interaction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0140657,ATP-dependent activity; GO:0003676,nucleic acid binding; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0006935,chemotaxis; GO:0009605,response to external stimulus; GO:0009856,pollination; GO:0022414,reproductive process; GO:0040011,locomotion; GO:0042221,response to chemical; GO:0042330,taxis; GO:0044706,multi-multicellular organism process; GO:0048868,pollen tube development; GO:0050896,response to stimulus; GO:0050918,positive chemotaxis; GO:0007154,cell communication; GO:0009987,cellular process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13087.9:AAA domain","--","--","--"]
["MS10G02670",39.4196,41.1216,43.4438,99.1009,61.2627,75.7517,96.7486,84.4427,91.5673,53.0174,53.2246,45.3511,54.4066,52.6419,47.1475,578,601,624,1063,785,933,1077,879,1213,631,668,673,626,604,542,0.477782947,0.000753152,0.002199749,false,0.608915166,"7.92899E-06","2.70844E-05",false,1.142272562,"3.67594E-08","1.77977E-07","up",1.421879646,"1.14161E-26","2.36017E-25","up",0.956201318,"2.683E-10","4.78726E-09",false,0.827944973,"1.45352E-08","4.05069E-07",false,0.278962313,0.178944449,0.637459259,false,0.679567023,0.00180327,0.01015059,false,0.557449856,0.00789216,0.060985476,false,"chr_0010",4299845,4300861,"+","MS10G02670","--","--","--","leucine-rich repeat extensin-like protein 3 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5GNX8_9ROSA SubName: Full=Leucine-rich repeat extensin-like protein 3 {ECO:0000313|EMBL:KAB2612444.1};","--","--","--","--","--","--"]
["MS10G03370",45.4561,35.9283,26.3509,1.2602,1.8664,2.5327,0.9341,1.8979,2.0408,3.4072,3.9767,2.7327,2.3496,4.1687,3.4371,641,505,364,13,23,30,10,19,26,39,48,39,26,46,38,-3.23744892,"3.3679E-29","1.60783E-27","down",-3.152068197,"3.90328E-26","9.03536E-25","down",-4.036557023,"1.50073E-32","6.04065E-31","down",-4.188019568,"2.01004E-33","6.13951E-32","down",-0.940585543,0.030848052,0.077828382,false,-1.020803431,0.023751211,0.082664731,false,-0.148557548,0.772462574,0.944712464,false,-0.787748418,0.058620922,0.155452267,false,-0.862218848,0.044594001,0.196667702,false,"chr_0010",5505585,5506780,"-","MS10G03370","--","--","--","uncharacterized protein LOC103444113 [Malus domestica]","--","A0A498J8G5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH90454.1};","--","--","--","--","--","--"]
["MS10G03570",67.4921,61.8302,70.8601,1.3469,2.7059,0.5865,0.4542,2.0124,1.5268,2.1849,0.2878,0.0974,0.4395,0.5037,0.6284,1370,1251,1409,20,48,10,7,29,28,36,5,2,7,8,10,-6.054599834,"1.01271E-07","6.17807E-07","down",-6.700392211,"1.74167E-95","5.71596E-93","down",-5.187327447,"1.09399E-36","5.56067E-35","down",-5.369897304,"9.16405E-65","1.02109E-62","down",0.710486785,0.48207956,0.628913015,false,1.35129498,0.039842154,0.121923248,false,-0.185054772,0.796490249,0.952045753,false,0.896624518,0.379759284,0.570297029,false,1.544923911,0.024512151,0.133195021,false,"chr_0010",5961502,5962657,"+","MS10G03570","--","--","--","transcription factor bHLH162-like [Malus sylvestris]","BH162_ARATH RecName: Full=Transcription factor bHLH162; AltName: Full=Basic helix-loop-helix protein 162; Short=AtbHLH162 {ECO:0000303|PubMed:14600211}; Short=bHLH 162; AltName: Full=bHLH transcription factor bHLH162;","A0A498J6Q7_MALDO RecName: Full=BHLH domain-containing protein {ECO:0000259|PROSITE:PS50888};","--","GO:0090575,RNA polymerase II transcription regulator complex; GO:0003700,DNA-binding transcription factor activity; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0046983,protein dimerization activity; GO:0000977,RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0050832,defense response to fungus; GO:0006357,regulation of transcription by RNA polymerase II; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0005515,protein binding; GO:0000976,transcription cis-regulatory region binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006366,transcription by RNA polymerase II; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005667,transcription regulator complex; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex","PF00010.29:Helix-loop-helix DNA-binding domain","bHLH","TF","bHLH"]
["MS10G04970",4.8595,3.3656,4.4457,10.1879,10.4731,8.5249,7.998,7.5059,8.7099,12.028,10.7651,14.763,8.7984,8.7552,8.6593,549,379,492,842,1034,809,686,602,889,1103,1041,1688,780,774,767,1.756482957,"8.51575E-18","1.66434E-16","up",1.341468709,"7.16162E-15","7.07231E-14","up",1.424099732,"1.37834E-11","1.03832E-10","up",1.216490683,"1.92307E-11","1.28479E-10","up",-0.526229194,0.002145469,0.008371455,false,-0.109382424,0.39115596,0.587013031,false,-0.210325663,0.235223044,0.691599389,false,-0.313045092,0.120215309,0.262888219,false,0.108332049,0.52384029,0.774637492,false,"chr_0010",8674328,8688774,"-","MS10G04970","--","--","--","hypothetical protein DVH24_000004 [Malus domestica]","HDR1_ORYSI RecName: Full=Protein HEADING DATE REPRESSOR 1 {ECO:0000250|UniProtKB:Q6K678};","A0A498J180_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH88405.1};","--","GO:0005634,nucleus; GO:0009909,regulation of flower development; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048580,regulation of post-embryonic development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048831,regulation of shoot system development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0061458,reproductive system development; GO:0065007,biological regulation; GO:0090567,reproductive shoot system development; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS10G06560",2.5259,2.0571,1.2741,1.9092,2.6863,1.2382,2.1136,2.8045,3.2892,2.1234,1.0415,1.0277,2.1207,1.7848,2.0467,85,69,42,47,79,35,54,67,100,58,30,35,56,47,54,-0.292175288,0.508784982,0.60598545,false,0.31036932,0.358742921,0.439438878,false,0.218856229,0.611473239,0.679526243,false,0.760117702,0.027607152,0.047391597,false,1.070170142,0.007426575,0.024104125,"up",0.468580642,0.105511224,0.24553876,false,0.538466669,0.163799595,0.618528288,false,0.530981091,0.27191842,0.458043448,false,-0.064188781,0.866579036,0.950866463,false,"chr_0010",16342954,16344392,"-","MS10G06560","--","K06215 pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] | (RefSeq) pyridoxal 5'-phosphate synthase-like subunit PDX1.2 (A)","ko00750: Vitamin B6 metabolism; ko01100: Metabolic pathways; ko01240: Biosynthesis of cofactors","pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Malus domestica]","PDX12_ARATH RecName: Full=Pyridoxal 5'-phosphate synthase-like subunit PDX1.2; Short=AtPDX1.2; Short=AtPDX1;3;","A0A498J3V7_MALDO RecName: Full=SOR_SNZ domain-containing protein {ECO:0000259|Pfam:PF01680};","Stationary phase-induced protein, SOR/SNZ family","GO:0005829,cytosol; GO:0016843,amine-lyase activity; GO:0046982,protein heterodimerization activity; GO:0006520,cellular amino acid metabolic process; GO:0042823,pyridoxal phosphate biosynthetic process; GO:0008615,pyridoxine biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016840,carbon-nitrogen lyase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0046983,protein dimerization activity; GO:0006082,organic acid metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006081,cellular aldehyde metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006766,vitamin metabolic process; GO:0006767,water-soluble vitamin metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0009058,biosynthetic process; GO:0009110,vitamin biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042364,water-soluble vitamin biosynthetic process; GO:0042816,vitamin B6 metabolic process; GO:0042819,vitamin B6 biosynthetic process; GO:0042822,pyridoxal phosphate metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044283,small molecule biosynthetic process; GO:0046184,aldehyde biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0072524,pyridine-containing compound metabolic process; GO:0072525,pyridine-containing compound biosynthetic process; GO:0090407,organophosphate biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0008614,pyridoxine metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF01680.20:SOR/SNZ family","--","--","--"]
["MS10G07700",17.1046,25.3317,23.2814,166.4538,348.1169,132.6008,121.2316,178.6938,57.2482,302.5411,185.7955,183.4913,326.1827,191.2627,340.2348,84,124,112,598,1494,547,452,623,254,1206,781,912,1257,735,1310,3.554128185,"6.27001E-37","4.73875E-35","up",4.002347521,"1.14088E-52","9.41289E-51","up",3.537511166,"7.95094E-20","1.3179E-18","up",2.744633484,"2.39086E-12","1.75798E-11","up",-0.798521433,0.050655125,0.115751707,false,-1.245716242,0.001287995,0.008148765,"down",-0.802857728,0.09425499,0.519731176,false,0.005155758,0.989854053,0.994778936,false,-0.43436621,0.270400947,0.560766232,false,"chr_0010",18743146,18743541,"-","MS10G07700","--","--","--","hypothetical protein I3760_01G225400 [Carya illinoinensis]","--","A0A5E4FIJ2_PRUDU SubName: Full=PREDICTED: CARUB_v10012353mg {ECO:0000313|EMBL:VVA27913.1};","--","--","--","--","--","--"]
["MS10G08720",5.7441,4.6422,4.6829,2.3447,3.7429,7.5031,0.4729,0.6181,1.1038,4.1772,9.4603,7.4886,3.8125,5.4035,3.5106,144,116,115,43,82,158,9,11,25,85,203,190,75,106,69,0.660777284,0.028341133,0.054181303,false,0.045936618,0.858977255,0.891223798,false,0.049031018,0.902646878,0.923640108,false,-2.483968898,"2.07616E-11","1.3831E-10","down",-3.137050978,"4.03396E-13","1.06495E-11","down",-2.515480859,"4.74701E-10","1.8245E-08","down",-2.542669745,"1.0585E-06",0.000503264,"down",-0.596646049,0.178676767,0.344899864,false,0.028230934,0.945977345,0.983631453,false,"chr_0010",20431986,20433267,"-","MS10G08720","--","K23947 2-oxoglutarate-dependent dioxygenase [EC:1.14.11.-] | (RefSeq) 2-oxoglutarate-dependent dioxygenase DAO-like (A)","ko00380: Tryptophan metabolism","probable inactive 2-oxoglutarate-dependent dioxygenase AOP2 [Malus domestica]","AOP1L_ARATH RecName: Full=Probable 2-oxoglutarate-dependent dioxygenase AOP1.2; EC=1.14.11.-;","A0A498IZF6_MALDO RecName: Full=Fe2OG dioxygenase domain-containing protein {ECO:0000259|PROSITE:PS51471};","Iron/ascorbate family oxidoreductases","GO:0051213,dioxygenase activity; GO:0046872,metal ion binding; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding","PF03171.23:2OG-Fe(II) oxygenase superfamily","--","--","--"]
["MS10G09860",27.8003,24.3337,25.3909,15.7884,37.7748,25.6454,25.4026,45.7051,32.4658,66.3149,33.6086,33.1216,28.8898,33.6735,75.851,1035,903,926,430,1229,802,718,1208,1092,2004,1071,1248,844,981,2214,0.982706811,0.001029569,0.002905346,false,1.121069698,0.000420686,0.001064582,"up",0.254629808,0.416046912,0.496449536,false,0.703707151,0.003032422,0.006434704,false,-0.263994674,0.448293465,0.598395991,false,-0.402002549,0.266786849,0.459271694,false,0.444141957,0.219837252,0.676570089,false,-0.706808055,0.075311126,0.187498415,false,-0.839152977,0.043070292,0.192800766,false,"chr_0010",21987411,22034669,"-","MS10G09860","--","--","--","hypothetical protein DVH24_000515 [Malus domestica]","GLIP1_ARATH RecName: Full=GDSL esterase/lipase 1 {ECO:0000303|PubMed:16126835}; EC=3.1.1.- {ECO:0000305}; AltName: Full=Extracellular lipase 1; Flags: Precursor;","A0A498J0X8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH88916.1};","--","GO:0005615,extracellular space; GO:0016298,lipase activity; GO:0042742,defense response to bacterium; GO:0050832,defense response to fungus; GO:0009866,induced systemic resistance, ethylene mediated signaling pathway; GO:0009871,jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; GO:0016042,lipid catabolic process; GO:0009620,response to fungus; GO:0009751,response to salicylic acid; GO:0009627,systemic acquired resistance; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0000160,phosphorelay signal transduction system; GO:0002218,activation of innate immune response; GO:0002252,immune effector process; GO:0002253,activation of immune response; GO:0002376,immune system process; GO:0002682,regulation of immune system process; GO:0002684,positive regulation of immune system process; GO:0002831,regulation of response to biotic stimulus; GO:0002833,positive regulation of response to biotic stimulus; GO:0006955,immune response; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009682,induced systemic resistance; GO:0009719,response to endogenous stimulus; GO:0009723,response to ethylene; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009873,ethylene-activated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0031347,regulation of defense response; GO:0031349,positive regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0032103,positive regulation of response to external stimulus; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0045087,innate immune response; GO:0045088,regulation of innate immune response; GO:0045089,positive regulation of innate immune response; GO:0048518,positive regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050776,regulation of immune response; GO:0050778,positive regulation of immune response; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0080134,regulation of response to stress; GO:0009611,response to wounding; GO:0009861,jasmonic acid and ethylene-dependent systemic resistance; GO:0006629,lipid metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0014070,response to organic cyclic compound; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF00657.25:GDSL-like Lipase/Acylhydrolase","--","--","--"]
["MS10G11280",0.7239,0.5933,0.7806,0.9199,0.5017,0.8497,0.8461,1.4506,1.1511,0.8542,0.5241,0.9571,0.4028,0.6254,0.5332,71,58,75,66,43,70,63,101,102,68,44,95,31,48,41,0.351513209,0.27881181,0.373438235,false,-0.134720147,0.658099927,0.722989568,false,0.31951321,0.319472197,0.398469654,false,1.000408018,0.000725333,0.001726017,"up",0.664766953,0.057133566,0.127519139,false,1.150492733,0.000454146,0.003449625,"up",0.682593416,0.045465803,0.386955992,false,-0.012510918,0.973157941,0.98646745,false,0.477936041,0.173338039,0.442688364,false,"chr_0010",24297479,24301672,"+","MS10G11280","--","K03018 DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] | (RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit 1-like (A)","ko03020: RNA polymerase","hypothetical protein DVH24_032718 [Malus domestica]","NRPC1_ARATH RecName: Full=DNA-directed RNA polymerase III subunit 1 {ECO:0000305}; AltName: Full=DNA-directed RNA polymerase III subunit RPC1 {ECO:0000305}; Short=DNA polymerase I subunit C1 {ECO:0000305}; EC=2.7.7.6 {ECO:0000305}; AltName: Full=Nuclear RNA polymerase C1 {ECO:0000312|EMBL:AED97269.1};","A0A498JAG0_MALDO RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};","RNA polymerase III, large subunit","GO:0005666,RNA polymerase III complex; GO:0003677,DNA binding; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0046872,metal ion binding; GO:0006351,DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034062,5'-3' RNA polymerase activity; GO:0097747,RNA polymerase activity; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0000428,DNA-directed RNA polymerase complex; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0030880,RNA polymerase complex; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055029,nuclear DNA-directed RNA polymerase complex; GO:0061695,transferase complex, transferring phosphorus-containing groups; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF04998.20:RNA polymerase Rpb1, domain 5","--","--","--"]
["MS10G11860",4.2037,3.9103,4.1269,4.1831,3.5755,3.8156,4.455,3.3123,4.8846,2.0438,2.5779,1.6391,3.2019,1.8936,2.7733,261,242,251,190,194,199,210,146,274,103,137,103,156,92,135,-0.787121012,0.000268503,0.000873173,false,-0.342147424,0.144843544,0.202549179,false,0.132087559,0.444509229,0.524722934,false,0.329358547,0.093502936,0.139343403,false,1.126328866,"9.90911E-06","7.32635E-05","up",0.6867376,0.009853223,0.042013597,false,0.194849189,0.358143165,0.783376174,false,0.934817226,0.000104564,0.000948929,false,0.50066987,0.048845904,0.208486414,false,"chr_0010",25017267,25023148,"+","MS10G11860","--","K20292 conserved oligomeric Golgi complex subunit 5 | (RefSeq) conserved oligomeric Golgi complex subunit 5 (A)","--","hypothetical protein DVH24_032662 [Malus domestica]","COG5_ARATH RecName: Full=Conserved oligomeric Golgi complex subunit 5 {ECO:0000303|PubMed:27448097}; Short=COG complex subunit 5 {ECO:0000303|PubMed:27448097}; AltName: Full=Component of oligomeric Golgi complex 5 {ECO:0000303|PubMed:27448097};","A0A498J6D6_MALDO RecName: Full=Conserved oligomeric Golgi complex subunit 5 {ECO:0000256|ARBA:ARBA00020974};","Predicted Golgi transport complex 1 protein","GO:0000139,Golgi membrane; GO:0017119,Golgi transport complex; GO:0005739,mitochondrion; GO:0042803,protein homodimerization activity; GO:0006891,intra-Golgi vesicle-mediated transport; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0006810,transport; GO:0008150,biological_process; GO:0016192,vesicle-mediated transport; GO:0048193,Golgi vesicle transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0099023,vesicle tethering complex","PF10392.12:Golgi transport complex subunit 5","--","--","--"]
["MS10G13180",24.3701,18.3642,23.3743,64.9683,32.4975,37.3164,34.4966,38.7523,68.9347,16.2794,18.1205,15.3894,42.7059,20.0703,20.7777,1125,845,1057,2194,1311,1447,1209,1270,2875,610,716,719,1547,725,752,-0.223045437,0.169979208,0.249060669,false,0.639703224,0.032975528,0.055168404,false,1.243385178,"1.39831E-05","4.59511E-05","up",1.374879646,"1.07509E-07","4.61395E-07","up",1.612450887,"6.24534E-10","1.04787E-08","up",0.754747333,0.030400114,0.099845426,false,0.135168228,0.688109038,0.919581796,false,1.481203601,"1.02464E-07","2.17387E-06","up",0.62835621,0.085861955,0.296778779,false,"chr_0010",26817774,26820315,"+","MS10G13180","--","K16285 RING/U-box domain-containing protein [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase XERICO (A)","--","probable E3 ubiquitin-protein ligase XERICO [Malus domestica]","XERIC_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase XERICO; EC=2.3.2.27; AltName: Full=RING-type E3 ubiquitin transferase XERICO;","A0A498J3I8_MALDO RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};","FOG: Predicted E3 ubiquitin ligase","GO:0016021,integral component of membrane; GO:0046872,metal ion binding; GO:0016740,transferase activity; GO:0009688,abscisic acid biosynthetic process; GO:0009687,abscisic acid metabolic process; GO:0016567,protein ubiquitination; GO:0009739,response to gibberellin; GO:0006970,response to osmotic stress; GO:0009651,response to salt stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0006066,alcohol metabolic process; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006714,sesquiterpenoid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0016106,sesquiterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043288,apocarotenoid metabolic process; GO:0043289,apocarotenoid biosynthetic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046165,alcohol biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:0120254,olefinic compound metabolic process; GO:0120255,olefinic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:1902644,tertiary alcohol metabolic process; GO:1902645,tertiary alcohol biosynthetic process; GO:0006807,nitrogen compound metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0070647,protein modification by small protein conjugation or removal; GO:1901564,organonitrogen compound metabolic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:1901700,response to oxygen-containing compound; GO:0006950,response to stress; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF13639.9:Ring finger domain","--","--","--"]
["MS10G14030",25.2756,25.1085,19.6606,3.2625,4.3053,2.348,2.8162,4.9728,3.4673,2.777,2.1106,2.391,2.26,2.7535,2.6214,1525,1510,1162,144,227,119,129,213,189,136,109,146,107,130,124,-3.079231163,"2.0546E-51","3.02067E-49","down",-2.909439044,"2.8996E-55","2.64337E-53","down",-2.595547779,"3.76076E-21","6.99675E-20","down",-2.35645123,"3.58315E-21","5.28501E-20","down",0.736230993,0.010719144,0.032516872,false,0.568487366,0.034612514,0.110045049,false,0.236876723,0.49027472,0.851459802,false,0.502300922,0.111091642,0.247921262,false,0.341277785,0.251406552,0.540252735,false,"chr_0010",27767848,27772852,"+","MS10G14030","--","K17275 plastin-1 | (RefSeq) fimbrin-1-like (A)","--","hypothetical protein DVH24_032428 [Malus domestica]","FIMB5_ARATH RecName: Full=Fimbrin-5 {ECO:0000305}; Short=AtFIM5; AltName: Full=Fimbrin-like protein 2 {ECO:0000312|EMBL:AED94007.1}; AltName: Full=Fimbrin5 {ECO:0000303|PubMed:21098731};","A0A498J9J7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH90071.1};","Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily","GO:0005884,actin filament; GO:0032432,actin filament bundle; GO:0005737,cytoplasm; GO:0051015,actin filament binding; GO:0030036,actin cytoskeleton organization; GO:0051017,actin filament bundle assembly; GO:0051639,actin filament network formation; GO:0009846,pollen germination; GO:0009860,pollen tube growth; GO:0003674,molecular_function; GO:0003779,actin binding; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0044877,protein-containing complex binding; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0030029,actin filament-based process; GO:0071840,cellular component organization or biogenesis; GO:0007015,actin filament organization; GO:0022607,cellular component assembly; GO:0044085,cellular component biogenesis; GO:0061572,actin filament bundle organization; GO:0097435,supramolecular fiber organization; GO:0000003,reproduction; GO:0009856,pollination; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0044706,multi-multicellular organism process; GO:0000902,cell morphogenesis; GO:0000904,cell morphogenesis involved in differentiation; GO:0003006,developmental process involved in reproduction; GO:0009653,anatomical structure morphogenesis; GO:0009826,unidimensional cell growth; GO:0009932,cell tip growth; GO:0016049,cell growth; GO:0030154,cell differentiation; GO:0032502,developmental process; GO:0040007,growth; GO:0048468,cell development; GO:0048588,developmental cell growth; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0048868,pollen tube development; GO:0048869,cellular developmental process; GO:0060560,developmental growth involved in morphogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005856,cytoskeleton; GO:0015629,actin cytoskeleton; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0099080,supramolecular complex; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber; GO:0110165,cellular anatomical entity","PF00307.34:Calponin homology (CH) domain","--","--","--"]
["MS10G14540",27.2812,26.1122,27.5437,34.2749,26.4464,21.6087,27.4263,34.8197,35.5361,14.1692,16.1432,12.5488,18.234,14.0012,14.6,1001,955,990,920,848,666,764,907,1178,422,507,466,525,402,420,-0.732662478,"3.02821E-07","1.70809E-06",false,-0.494002168,0.002171477,0.00477686,false,0.244641734,0.258229768,0.332524831,false,0.55444707,0.000215482,0.000562333,false,1.299287195,"3.47212E-13","9.24359E-12","up",1.064639354,"1.79851E-08","4.91121E-07","up",0.309052706,0.19101871,0.64815208,false,0.992748102,"2.60092E-05",0.000285177,false,0.764124859,0.001419927,0.017591556,false,"chr_0010",28339895,28342417,"+","MS10G14540","--","K14012 UBX domain-containing protein 1 | (RefSeq) plant UBX domain-containing protein 4-like (A)","ko04141: Protein processing in endoplasmic reticulum","plant UBX domain-containing protein 4-like [Malus domestica]","PUX4_ARATH RecName: Full=Plant UBX domain-containing protein 4 {ECO:0000303|Ref.6}; Short=PUX4 {ECO:0000303|Ref.6}; AltName: Full=CDC48-interacting UBX-domain protein 4 {ECO:0000312|EMBL:AAS78926.1};","A0A540KYJ1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD79288.1};","Protein tyrosine phosphatase SHP1/Cofactor for p97 ATPase-mediated vesicle membrane fusion","GO:0005829,cytosol; GO:0005634,nucleus; GO:0051117,ATPase binding; GO:0043130,ubiquitin binding; GO:0000045,autophagosome assembly; GO:0007030,Golgi organization; GO:0061025,membrane fusion; GO:0031468,nuclear membrane reassembly; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0032182,ubiquitin-like protein binding; GO:0006914,autophagy; GO:0006996,organelle organization; GO:0007033,vacuole organization; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0016236,macroautophagy; GO:0022607,cellular component assembly; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0061919,process utilizing autophagic mechanism; GO:0070925,organelle assembly; GO:0071840,cellular component organization or biogenesis; GO:1905037,autophagosome organization; GO:0010256,endomembrane system organization; GO:0061024,membrane organization; GO:0006997,nucleus organization; GO:0006998,nuclear envelope organization; GO:0044091,membrane biogenesis; GO:0071709,membrane assembly; GO:0071763,nuclear membrane organization; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009057,macromolecule catabolic process; GO:0010498,proteasomal protein catabolic process; GO:0019538,protein metabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF08059.16:SEP domain","--","--","--"]
["MS10G14970",0.0557,0.0559,0.1137,4.795,1.9114,1.392,2.8602,4.9411,5.9164,0.1372,0,0.055,1.4191,0.2846,0.4971,1,1,2,63,30,21,39,63,96,2,0,1,20,4,7,"NA","NA","NA","NA","NA","NA","NA","NA",5.3913598,"9.92013E-09","5.22513E-08","up",6.21174494,"3.83736E-14","3.34883E-13","up",6.296904433,"1.447E-11","3.09281E-10","up",2.633165747,"2.53404E-06","4.09366E-05","up",0.82609979,0.109388193,0.54529726,false,5.469924283,"2.00552E-07","4.00356E-06","up",1.818161457,0.010347468,0.07384426,false,"chr_0010",28856344,28857111,"-","MS10G14970","--","--","--","hypothetical protein DVH24_032328 [Malus domestica]","--","A0A498J992_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89971.1};","--","--","PF14009.9:PADRE domain","--","--","--"]
["MS10G15820",6.3816,6.122,7.6559,14.0722,12.5795,15.4718,12.3325,9.9077,11.9617,10.2149,15.673,17.3055,16.9179,19.1679,18.1211,137,131,161,221,236,279,201,151,232,178,288,376,285,322,305,1.282697427,"3.82114E-08","2.49158E-07","up",1.72064936,"5.6812E-24","1.1202E-22","up",1.276395791,"7.14181E-12","5.52392E-11","up",1.047884896,"1.39181E-07","5.88409E-07","up",-0.222869544,0.346186709,0.498695656,false,-0.657532525,0.000157412,0.001427278,false,-0.230477696,0.206208823,0.663484822,false,0.010504453,0.963466596,0.981298435,false,-0.419153693,0.009108237,0.067485198,false,"chr_0010",30113664,30114730,"+","MS10G15820","--","--","--","formimidoyltransferase-cyclodeaminase-like isoform X1 [Malus domestica]","--","A0A540M513_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD93840.1};","--","GO:0005542,folic acid binding; GO:0016740,transferase activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0019842,vitamin binding; GO:0031406,carboxylic acid binding; GO:0033218,amide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0043177,organic acid binding; GO:0072341,modified amino acid binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity","PF07837.15:Formiminotransferase domain, N-terminal subdomain","--","--","--"]
["MS10G16790",33.4911,39.3974,31.7542,15.7311,16.6859,14.9882,13.5386,16.3833,18.018,15.2379,16.0876,15.7683,13.5999,12.3182,14.145,1362,1597,1265,468,593,512,418,473,662,503,560,649,434,392,451,-0.966705994,"2.98866E-11","2.97868E-10",false,-1.093731711,"1.61754E-12","1.2673E-11","down",-0.926011194,"5.06855E-08","2.40133E-07",false,-0.847245194,"8.99312E-07","3.40692E-06",false,0.133641086,0.392893585,0.545812952,false,0.263388496,0.116849093,0.263986035,false,0.077444632,0.671372588,0.914612235,false,0.058590601,0.701439953,0.829042306,false,0.193874719,0.238024634,0.525660649,false,"chr_0010",31383447,31387263,"+","MS10G16790","--","K20242 ecotropic viral integration site 5 protein | (RefSeq) EVI5-like protein (A)","--","EVI5-like protein [Malus domestica]","GAP22_ARATH RecName: Full=Rab GTPase-activating protein 22 {ECO:0000303|PubMed:16332933};","A0A498J2I2_MALDO RecName: Full=Rab-GAP TBC domain-containing protein {ECO:0000259|PROSITE:PS50086};","Rab6 GTPase activator GAPCenA and related TBC domain proteins","GO:0005634,nucleus; GO:0005777,peroxisome; GO:0005096,GTPase activator activity; GO:0006952,defense response; GO:0003674,molecular_function; GO:0008047,enzyme activator activity; GO:0030234,enzyme regulator activity; GO:0030695,GTPase regulator activity; GO:0060589,nucleoside-triphosphatase regulator activity; GO:0098772,molecular function regulator activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005737,cytoplasm; GO:0042579,microbody","PF00566.21:Rab-GTPase-TBC domain","--","--","--"]
["MS10G18160",6.9484,7.2069,7.6799,2.8923,2.5408,3.6695,2.3397,1.6558,2.0818,6.1789,6.8665,7.485,5.2263,7.1771,4.6978,266,275,288,81,85,118,68,45,72,192,225,290,157,215,141,0.099032123,0.528387849,0.624400741,false,-0.060084643,0.771413804,0.821149255,false,-1.052154378,"1.94792E-07","8.5291E-07","down",-1.560082439,"6.01374E-13","4.68593E-12","down",-1.645389307,"2.50878E-13","6.77419E-12","down",-1.485537173,"3.88005E-08","9.87789E-07","down",-0.509346505,0.060790812,0.437099059,false,-1.133413319,"9.13161E-08","1.95933E-06","down",-0.967737845,0.000165565,0.00328145,false,"chr_0010",33253195,33255770,"-","MS10G18160","--","K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB16-like (A)","--","MYB domain class transcription factor [Malus domestica]","MYB16_ARATH RecName: Full=Transcription factor MYB16 {ECO:0000305}; AltName: Full=Myb-related protein 16 {ECO:0000303|PubMed:11597504}; Short=AtMYB16 {ECO:0000303|PubMed:11597504}; AltName: Full=Protein MIXTA homolog {ECO:0000303|PubMed:17376813}; Short=AtMIXTA {ECO:0000303|PubMed:17376813};","A0A678STA0_MALDO SubName: Full=MYB domain class transcription factor {ECO:0000313|EMBL:AUZ96345.1};","Transcription factor, Myb superfamily","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0000902,cell morphogenesis; GO:0035017,cuticle pattern formation; GO:1901957,regulation of cutin biosynthetic process; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0008150,biological_process; GO:0009653,anatomical structure morphogenesis; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0003002,regionalization; GO:0007275,multicellular organism development; GO:0007389,pattern specification process; GO:0032501,multicellular organismal process; GO:0042335,cuticle development; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010143,cutin biosynthetic process; GO:0010556,regulation of macromolecule biosynthetic process; GO:0019222,regulation of metabolic process; GO:0043170,macromolecule metabolic process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","MYB","TF","MYB->MYB"]
["MS10G18930",3.8389,2.9015,2.39,0.0706,0.4925,0.082,0.1814,0.4607,0.2858,0.5302,0.1408,0.2041,0.0439,0.176,0.3074,223,168,136,3,25,4,8,19,15,25,7,12,2,8,14,-3.19924061,"3.73809E-12","4.10954E-11","down",-3.831847228,"5.48661E-17","6.5478E-16","down",-3.564307766,"8.32401E-09","4.4259E-08","down",-3.031261744,"1.47866E-14","1.33749E-13","down",0.180277501,0.798082823,0.874155189,false,"NA","NA","NA","NA",0.538801392,0.536270039,0.869376319,false,-0.363209198,0.700239419,0.828297284,false,"NA","NA","NA","NA","chr_0010",33836094,33847538,"-","MS10G18930","--","--","--","TMV resistance protein N-like [Malus sylvestris]","RPP2A_ARATH RecName: Full=Disease resistance protein RPP2A {ECO:0000305}; EC=3.2.2.6 {ECO:0000255|PROSITE-ProRule:PRU00204};","A0A540MH13_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD98048.1};","--","GO:0043531,ADP binding; GO:0005524,ATP binding; GO:0050135,NAD(P)+ nucleosidase activity; GO:0061809,NAD+ nucleotidase, cyclic ADP-ribose generating; GO:0006952,defense response; GO:0007165,signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016799,hydrolase activity, hydrolyzing N-glycosyl compounds; GO:0003953,NAD+ nucleosidase activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0007154,cell communication; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation","PF12799.10:Leucine Rich repeats (2 copies)","--","--","--"]
["MS10G19800",1.0686,1.0193,0.7153,0.2874,0.2406,0.1251,0.2307,0.0987,0.2909,0.5827,0.2865,0.2077,0.1116,0.2463,0.2905,61,58,40,12,12,6,10,4,15,27,14,12,5,11,13,-1.198564981,0.012796511,0.027246177,"down",-1.828269476,0.000109894,0.00030893,"down",-1.892918507,"9.04836E-05",0.000258205,"down",-1.882552698,0.000120878,0.00032983,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",34949543,34953565,"-","MS10G19800","--","K00278 L-aspartate oxidase [EC:1.4.3.16] | (RefSeq) L-aspartate oxidase, chloroplastic-like (A)","ko00250: Alanine, aspartate and glutamate metabolism; ko00760: Nicotinate and nicotinamide metabolism; ko01100: Metabolic pathways; ko01240: Biosynthesis of cofactors","L-aspartate oxidase, chloroplastic-like [Malus domestica]","AO2A_TOBAC RecName: Full=L-aspartate oxidase 2-a, chloroplastic {ECO:0000303|PubMed:32242247}; EC=1.4.3.16 {ECO:0000250|UniProtKB:Q94AY1}; Flags: Precursor;","A0A498J468_MALDO RecName: Full=L-aspartate oxidase {ECO:0000256|ARBA:ARBA00012173, ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|ARBA:ARBA00012173, ECO:0000256|RuleBase:RU362049};","Succinate dehydrogenase, flavoprotein subunit","GO:0009507,chloroplast; GO:0008734,L-aspartate oxidase activity; GO:0044318,L-aspartate:fumarate oxidoreductase activity; GO:0000166,nucleotide binding; GO:0009435,NAD biosynthetic process; GO:0001716,L-amino-acid oxidase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016638,oxidoreductase activity, acting on the CH-NH2 group of donors; GO:0016641,oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor; GO:0005488,binding; GO:0036094,small molecule binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009117,nucleotide metabolic process; GO:0009165,nucleotide biosynthetic process; GO:0009987,cellular process; GO:0018130,heterocycle biosynthetic process; GO:0019359,nicotinamide nucleotide biosynthetic process; GO:0019362,pyridine nucleotide metabolic process; GO:0019363,pyridine nucleotide biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0046496,nicotinamide nucleotide metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0072524,pyridine-containing compound metabolic process; GO:0072525,pyridine-containing compound biosynthetic process; GO:0090407,organophosphate biosynthetic process; GO:1901293,nucleoside phosphate biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00890.27:FAD binding domain","--","--","--"]
["MS10G20760",1.3621,1.4247,1.8491,0.9904,0.6798,1.3111,0.9352,0.5511,0.818,1.2496,2.2346,1.6895,1.348,1.3333,0.7763,94,98,125,50,41,76,49,27,51,70,132,118,73,72,42,0.340178609,0.207254283,0.292481916,false,-0.124871388,0.675304174,0.737801346,false,-0.430688662,0.161491464,0.222251293,false,-0.71998834,0.017285396,0.031154764,false,-1.049385372,0.001629047,0.006625819,"down",-0.58116068,0.108345308,0.250354017,false,-0.291082641,0.423947479,0.816223953,false,-0.756269785,0.024829278,0.081380334,false,-0.281530853,0.435394157,0.711823479,false,"chr_0010",36106265,36110427,"+","MS10G20760","--","--","--","hypothetical protein DVH24_031667 [Malus domestica]","PP264_ARATH RecName: Full=Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic {ECO:0000303|PubMed:29891689}; Flags: Precursor;","A0A498J1E6_MALDO RecName: Full=PPR_long domain-containing protein {ECO:0000259|Pfam:PF17177};","FOG: PPR repeat","GO:0009570,chloroplast stroma; GO:0009535,chloroplast thylakoid membrane; GO:0003729,mRNA binding; GO:0043022,ribosome binding; GO:0003723,RNA binding; GO:0008494,translation activator activity; GO:0010207,photosystem II assembly; GO:0032544,plastid translation; GO:0009416,response to light stimulus; GO:0006413,translational initiation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043021,ribonucleoprotein complex binding; GO:0044877,protein-containing complex binding; GO:0045182,translation regulator activity; GO:0090079,translation regulator activity, nucleic acid binding; GO:0006091,generation of precursor metabolites and energy; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0015979,photosynthesis; GO:0016043,cellular component organization; GO:0019684,photosynthesis, light reaction; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0006412,translation; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006996,organelle organization; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009657,plastid organization; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0009314,response to radiation; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009532,plastid stroma; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane","PF13041.9:PPR repeat family","--","--","--"]
["MS10G21300",4.7354,4.8746,5.7545,1.9069,2.2696,2.7114,2.1125,1.8581,1.9117,3.4723,4.1243,4.4445,2.1285,2.947,2.9413,499,512,594,147,209,240,169,139,182,297,372,474,176,243,243,-0.164233564,0.289345808,0.384878375,false,-0.646798717,0.000317306,0.00082184,false,-0.942113273,"5.08803E-07","2.08865E-06",false,-1.099934431,"1.45274E-10","8.86905E-10","down",-0.923026343,"2.30921E-07","2.4697E-06",false,-0.438074791,0.034677273,0.110187642,false,-0.160056477,0.448419171,0.829016296,false,-0.759931687,0.000114065,0.001018867,false,-0.270345364,0.225638608,0.510271019,false,"chr_0010",36493617,36505462,"+","MS10G21300","--","K05016 chloride channel 7 | (RefSeq) LOW QUALITY PROTEIN: chloride channel protein CLC-b (A)","--","uncharacterized protein LOC103442143 [Malus domestica]","CLCB_ARATH RecName: Full=Chloride channel protein CLC-b; Short=AtCLC-b; AltName: Full=CBS domain-containing protein CBSCLC7;","A0A5N5GJQ0_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2614091.1};","--","GO:0034707,chloride channel complex; GO:0043231,intracellular membrane-bounded organelle; GO:0009705,plant-type vacuole membrane; GO:0009671,nitrate:proton symporter activity; GO:0005247,voltage-gated chloride channel activity; GO:0034765,regulation of ion transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0008324,cation transmembrane transporter activity; GO:0008509,anion transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015078,proton transmembrane transporter activity; GO:0015103,inorganic anion transmembrane transporter activity; GO:0015112,nitrate transmembrane transporter activity; GO:0015291,secondary active transmembrane transporter activity; GO:0015293,symporter activity; GO:0015294,solute:cation symporter activity; GO:0015295,solute:proton symporter activity; GO:0015296,anion:cation symporter activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0015513,high-affinity secondary active nitrite transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022853,active ion transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0005216,ion channel activity; GO:0005244,voltage-gated ion channel activity; GO:0005253,anion channel activity; GO:0005254,chloride channel activity; GO:0008308,voltage-gated anion channel activity; GO:0015108,chloride transmembrane transporter activity; GO:0015267,channel activity; GO:0022803,passive transmembrane transporter activity; GO:0022832,voltage-gated channel activity; GO:0022836,gated channel activity; GO:0006810,transport; GO:0006811,ion transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032879,regulation of localization; GO:0034220,ion transmembrane transport; GO:0034762,regulation of transmembrane transport; GO:0043269,regulation of ion transport; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051049,regulation of transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0031224,intrinsic component of membrane; GO:0032991,protein-containing complex; GO:0034702,ion channel complex; GO:0098796,membrane protein complex; GO:0110165,cellular anatomical entity; GO:1902495,transmembrane transporter complex; GO:1990351,transporter complex; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0000325,plant-type vacuole; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle","PF03602.18:Conserved hypothetical protein 95","--","--","--"]
["MS11G00310",0.5683,0.2851,0.1934,0.3884,2.7094,1.0711,1.5594,2.4014,1.5725,3.6754,2.3789,2.1991,2.3535,1.9365,2.416,12,6,4,6,50,19,25,36,30,63,43,47,39,32,40,3.166007791,"2.06776E-09","1.61609E-08","up",2.965854903,"3.88503E-09","2.09096E-08","up","NA","NA","NA","NA",2.678529228,"1.83935E-06","6.68302E-06","up",-0.474261236,0.239084696,0.381906307,false,-0.276304545,0.45673859,0.644732045,false,0.441148594,0.505778207,0.857127008,false,-0.914821081,0.157586733,0.316701906,false,-0.702872785,0.259362025,0.548905404,false,"chr_0011",278838,281542,"-","MS11G00310","--","--","--","uncharacterized protein At4g15970-like [Malus domestica]","Y4597_ARATH RecName: Full=Uncharacterized protein At4g15970;","A0A540LB01_MALBA RecName: Full=Nucleotid_trans domain-containing protein {ECO:0000259|Pfam:PF03407};","--","--","PF03407.19:Nucleotide-diphospho-sugar transferase","--","--","--"]
["MS11G01130",8.0699,5.3509,4.4505,1.6484,2.1759,1.7116,1.9549,3.5278,2.7721,1.257,1.8964,1.0082,2.6597,0.5927,1.0056,174,115,94,26,41,31,32,54,54,22,35,22,45,10,17,-1.931714028,"2.55821E-07","1.46026E-06","down",-1.770730393,0.000416459,0.001054518,"down",-1.473639266,"3.70286E-05",0.000113296,"down",-0.838607463,0.01826119,0.032758707,false,1.105395208,0.007617639,0.024606168,"up",0.950932586,0.085894456,0.211820564,false,0.633669546,0.096487188,0.523220903,false,0.473225212,0.266146248,0.451541895,false,0.324145383,0.574218326,0.805572248,false,"chr_0011",1067196,1070144,"+","MS11G01130","--","K07976 Rab family, other | (RefSeq) ras-related protein RABA6a-like (A)","--","ras-related protein RABA6a-like [Malus domestica]","RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a;","A0A540NHF0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE09940.1};","GTPase Rab11/YPT3, small G protein superfamily","GO:0005886,plasma membrane; GO:0005525,GTP binding; GO:0003924,GTPase activity; GO:0006886,intracellular protein transport; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0019001,guanyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0006810,transport; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF00071.25:Ras family","--","--","--"]
["MS11G02170",1.4578,1.5167,0.8819,0,0.0618,0.0643,0,0,0.0598,0.1996,0,0,0,0.207,0,27,28,16,0,1,1,0,0,1,3,0,0,0,3,0,-4.181593007,"7.32916E-05",0.000268948,"down",-3.937506639,0.000177746,0.000481836,"down",-4.664232578,"8.57022E-05",0.000245785,"down",-5.430697512,"4.57863E-05",0.000134307,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0011",2019685,2021978,"+","MS11G02170","--","--","--","hypothetical protein DVH24_009046 [Malus domestica]","HIP26_ARATH RecName: Full=Heavy metal-associated isoprenylated plant protein 26 {ECO:0000303|PubMed:21072340, ECO:0000303|PubMed:23368984}; Short=AtHIP26 {ECO:0000303|PubMed:23368984}; Short=AtHIPP26 {ECO:0000303|PubMed:21072340, ECO:0000303|PubMed:23368984}; AltName: Full=Farnesylated protein 6 {ECO:0000303|PubMed:8837031}; Short=AtFP6 {ECO:0000303|PubMed:8837031}; Flags: Precursor;","A0A498JSL7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH96542.1};","Copper chaperone","GO:0031965,nuclear membrane; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0046870,cadmium ion binding; GO:0005507,copper ion binding; GO:0032791,lead ion binding; GO:0010286,heat acclimation; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009266,response to temperature stimulus; GO:0009408,response to heat; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005635,nuclear envelope; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF00403.29:Heavy-metal-associated domain","--","--","--"]
["MS11G02400",13.5036,16.945,13.8924,3.019,2.6957,4.0816,2.2718,2.0443,3.6319,8.0849,12.041,11.9916,5.4949,8.8434,7.646,642,803,647,105,112,163,82,69,156,312,490,577,205,329,285,-0.285008551,0.143239671,0.215819891,false,-0.724003153,0.000454615,0.001143779,false,-1.971101722,"8.61804E-21","1.54544E-19","down",-2.20017439,"4.39829E-20","6.00777E-19","down",-1.901739086,"1.09787E-12","2.73562E-11","down",-1.460513814,"1.75531E-07","3.88286E-06","down",-0.229491229,0.432536266,0.821050673,false,-1.669770362,"1.22861E-12","7.07437E-11","down",-1.223064337,"1.07349E-06","5.04323E-05","down","chr_0011",2239951,2242373,"-","MS11G02400","--","--","--","transcription factor MYBS1-like [Malus sylvestris]","SRM1_ARATH RecName: Full=Transcription factor SRM1 {ECO:0000305}; AltName: Full=Myb-related protein SRM1 {ECO:0000305}; AltName: Full=Protein SALT-RELATED MYB 1 {ECO:0000303|PubMed:26243618};","A0A498JLA8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH96518.1};","Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0009738,abscisic acid-activated signaling pathway; GO:1901001,negative regulation of response to salt stress; GO:0010116,positive regulation of abscisic acid biosynthetic process; GO:1905615,positive regulation of developmental vegetative growth; GO:0045893,positive regulation of DNA-templated transcription; GO:0009787,regulation of abscisic acid-activated signaling pathway; GO:1901371,regulation of leaf morphogenesis; GO:0006355,regulation of DNA-templated transcription; GO:0009739,response to gibberellin; GO:0009751,response to salicylic acid; GO:0009651,response to salt stress; GO:0009414,response to water deprivation; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0009628,response to abiotic stimulus; GO:0047484,regulation of response to osmotic stress; GO:0048519,negative regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0080134,regulation of response to stress; GO:1901000,regulation of response to salt stress; GO:0006066,alcohol metabolic process; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006714,sesquiterpenoid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009687,abscisic acid metabolic process; GO:0009688,abscisic acid biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010115,regulation of abscisic acid biosynthetic process; GO:0010565,regulation of cellular ketone metabolic process; GO:0016053,organic acid biosynthetic process; GO:0016106,sesquiterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0019216,regulation of lipid metabolic process; GO:0019222,regulation of metabolic process; GO:0019747,regulation of isoprenoid metabolic process; GO:0019748,secondary metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042180,cellular ketone metabolic process; GO:0043288,apocarotenoid metabolic process; GO:0043289,apocarotenoid biosynthetic process; GO:0043436,oxoacid metabolic process; GO:0043455,regulation of secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0045828,positive regulation of isoprenoid metabolic process; GO:0045834,positive regulation of lipid metabolic process; GO:0046165,alcohol biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0046889,positive regulation of lipid biosynthetic process; GO:0046890,regulation of lipid biosynthetic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0062012,regulation of small molecule metabolic process; GO:0062013,positive regulation of small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:0080090,regulation of primary metabolic process; GO:0120254,olefinic compound metabolic process; GO:0120255,olefinic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:1902644,tertiary alcohol metabolic process; GO:1902645,tertiary alcohol biosynthetic process; GO:1902930,regulation of alcohol biosynthetic process; GO:1902932,positive regulation of alcohol biosynthetic process; GO:0032502,developmental process; GO:0040007,growth; GO:0040008,regulation of growth; GO:0045927,positive regulation of growth; GO:0048589,developmental growth; GO:0048638,regulation of developmental growth; GO:0048639,positive regulation of developmental growth; GO:0050793,regulation of developmental process; GO:0051094,positive regulation of developmental process; GO:0080186,developmental vegetative growth; GO:1905613,regulation of developmental vegetative growth; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009966,regulation of signal transduction; GO:0010646,regulation of cell communication; GO:0023051,regulation of signaling; GO:1901419,regulation of response to alcohol; GO:1905957,regulation of cellular response to alcohol; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009965,leaf morphogenesis; GO:0010016,shoot system morphogenesis; GO:0022603,regulation of anatomical structure morphogenesis; GO:0032501,multicellular organismal process; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:1900618,regulation of shoot system morphogenesis; GO:1905392,plant organ morphogenesis; GO:1905421,regulation of plant organ morphogenesis; GO:0014070,response to organic cyclic compound; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:0010035,response to inorganic substance; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","MYB","TF","MYB->MYB"]
["MS11G02980",2.9808,2.9905,4.2601,2.2967,2.8528,2.9034,2.3558,2.4429,1.6797,4.1397,3.9257,4.6053,4.2821,4.6404,4.6315,55,55,77,31,46,45,33,32,28,62,62,86,62,67,67,0.500978675,0.070732075,0.118835838,false,0.701298877,0.009711318,0.018490505,false,-0.123794927,0.697276125,0.754909372,false,-0.375082023,0.283168738,0.360797891,false,-0.865810338,0.007468169,0.024219753,false,-1.065033203,0.000756577,0.005275238,"down",-0.254890441,0.482224248,0.847942159,false,-0.606082661,0.040715381,0.118262251,false,-0.79839203,0.005406857,0.046070476,false,"chr_0011",2701864,2703455,"+","MS11G02980","--","K05863 solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31 | (RefSeq) LOW QUALITY PROTEIN: ADP,ATP carrier protein ER-ANT1-like (A)","--","hypothetical protein DVH24_008972 [Malus domestica]","ADT4_ARATH RecName: Full=ADP,ATP carrier protein ER-ANT1; AltName: Full=ADP/ATP translocase ER-ANT1; AltName: Full=Endoplasmic reticulum-adenine nucleotide transporter 1; Short=ER-ANT1;","A0A498JL57_MALDO RecName: Full=ADP/ATP translocase {ECO:0000256|RuleBase:RU368008}; AltName: Full=ADP,ATP carrier protein {ECO:0000256|RuleBase:RU368008};","Mitochondrial ADP/ATP carrier proteins","GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0005743,mitochondrial inner membrane; GO:0005471,ATP:ADP antiporter activity; GO:0051503,adenine nucleotide transport; GO:0140021,mitochondrial ADP transmembrane transport; GO:1990544,mitochondrial ATP transmembrane transport; GO:0048364,root development; GO:0048316,seed development; GO:0048367,shoot system development; GO:0000295,adenine nucleotide transmembrane transporter activity; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005346,purine ribonucleotide transmembrane transporter activity; GO:0005347,ATP transmembrane transporter activity; GO:0008509,anion transmembrane transporter activity; GO:0008514,organic anion transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015215,nucleotide transmembrane transporter activity; GO:0015216,purine nucleotide transmembrane transporter activity; GO:0015217,ADP transmembrane transporter activity; GO:0015291,secondary active transmembrane transporter activity; GO:0015297,antiporter activity; GO:0015605,organophosphate ester transmembrane transporter activity; GO:0015932,nucleobase-containing compound transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022853,active ion transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0140323,solute:anion antiporter activity; GO:1901505,carbohydrate derivative transmembrane transporter activity; GO:0006810,transport; GO:0006862,nucleotide transport; GO:0008150,biological_process; GO:0015748,organophosphate ester transport; GO:0015865,purine nucleotide transport; GO:0015931,nucleobase-containing compound transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0006811,ion transport; GO:0006820,anion transport; GO:0009987,cellular process; GO:0015711,organic anion transport; GO:0015866,ADP transport; GO:0015868,purine ribonucleotide transport; GO:0034220,ion transmembrane transport; GO:0055085,transmembrane transport; GO:0072530,purine-containing compound transmembrane transport; GO:0098656,anion transmembrane transport; GO:1901264,carbohydrate derivative transport; GO:1901679,nucleotide transmembrane transport; GO:1990542,mitochondrial transmembrane transport; GO:0015867,ATP transport; GO:0007275,multicellular organism development; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0048608,reproductive structure development; GO:0061458,reproductive system development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane; GO:0005739,mitochondrion; GO:0005740,mitochondrial envelope; GO:0019866,organelle inner membrane; GO:0031966,mitochondrial membrane; GO:0031967,organelle envelope; GO:0031975,envelope","PF00153.30:Mitochondrial carrier protein","--","--","--"]
["MS11G03930",12.8337,14.9057,15.8193,31.7382,25.0449,31.7615,31.003,18.2277,23.1646,33.1964,34.3421,40.5675,35.2206,41.5123,33.4177,241,279,291,436,411,501,442,243,393,506,552,771,519,610,492,1.49994852,"9.56591E-21","2.44958E-19","up",1.632149844,"9.42776E-24","1.83807E-22","up",1.235408614,"8.92108E-13","7.64232E-12","up",1.019403965,"1.58595E-05","5.0119E-05","up",-0.468010824,0.042922659,0.101791706,false,-0.598853274,0.009020959,0.0392511,false,-0.219475566,0.354263506,0.780846491,false,-0.247039301,0.135712165,0.285663988,false,-0.371841256,0.02843568,0.147406053,false,"chr_0011",3766828,3769276,"+","MS11G03930","--","--","--","uncharacterized protein LOC103420347 [Malus domestica]","--","A0A540KYV6_MALBA RecName: Full=HNHc domain-containing protein {ECO:0000259|SMART:SM00507};","--","GO:0004519,endonuclease activity; GO:0003676,nucleic acid binding; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004518,nuclease activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding","PF01844.26:HNH endonuclease","--","--","--"]
["MS11G04570",1.6509,1.4697,0.3798,0.0636,0,0.0277,0,0.0328,0,0.2578,0.0815,0.2068,0.2371,0.0594,0,71,63,16,2,0,1,0,1,0,9,3,9,8,2,0,-2.493341216,0.000333459,0.001059803,"down",-3.267382792,0.00015692,0.00042956,"down",-5.133036037,"1.61751E-06","6.17443E-06","down",-6.513764155,"1.45076E-06","5.3469E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0011",4262010,4266133,"-","MS11G04570","--","K13418 somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) LOW QUALITY PROTEIN: somatic embryogenesis receptor kinase 2 (A)","--","LRR receptor-like serine/threonine-protein kinase FEI 2 [Malus domestica]","FEI1_ARATH RecName: Full=LRR receptor-like serine/threonine-protein kinase FEI 1; EC=2.7.11.1; Flags: Precursor;","A0A5N5HBV6_9ROSA SubName: Full=LRR receptor-like serine/threonine-protein kinase FEI 2 {ECO:0000313|EMBL:KAB2620624.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0030244,cellulose biosynthetic process; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0030243,cellulose metabolic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS11G06020",2.7566,4.7555,2.6082,0.3217,0.0769,0.8404,0.0886,0.4735,0.1861,3.3133,3.9275,3.1223,1.071,1.1599,1.072,82,141,76,7,2,21,2,10,5,80,100,94,25,27,25,0.215222398,0.487269807,0.585433,false,-1.325956973,0.000240137,0.000635567,"down",-2.847731729,"4.59247E-06","1.63372E-05","down",-3.504973045,"3.90742E-10","2.27709E-09","down",-3.713412851,"1.2065E-13","3.38654E-12","down",-2.158359549,0.000514671,0.003821437,"down","NA","NA","NA","NA",-3.047970862,"1.04693E-07","2.2162E-06","down",-1.500386985,0.027289745,0.143532664,false,"chr_0011",5676996,5680747,"+","MS11G06020","--","--","--","hypothetical protein DVH24_008703 [Malus domestica]","--","A0A498JJU3_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH96199.1};","--","--","PF03080.18:Neprosin","--","--","--"]
["MS11G06470",10.5772,8.4015,10.9055,38.4878,38.5724,43.9375,44.9761,39.49,46.6965,28.0694,35.3442,32.6352,46.0138,41.3416,33.2753,701,555,708,1866,2234,2446,2263,1858,2796,1510,2005,2189,2393,2144,1729,1.868626076,"5.32843E-35","3.57053E-33","up",2.309322383,"2.20729E-36","9.43511E-35","up",2.231363597,"1.76842E-48","1.53122E-46","up",2.417143323,"5.35705E-56","4.34257E-54","up",0.560511564,"2.39599E-05",0.000162474,false,0.122978193,0.480128139,0.665693973,false,0.183439643,0.147901395,0.602441488,false,0.379295472,0.00366991,0.017958583,false,-0.052025645,0.764780308,0.907413347,false,"chr_0011",6234342,6238397,"-","MS11G06470","--","K03517 quinolinate synthase [EC:2.5.1.72] | (RefSeq) quinolinate synthase, chloroplastic (A)","ko00760: Nicotinate and nicotinamide metabolism; ko01100: Metabolic pathways; ko01240: Biosynthesis of cofactors","quinolinate synthase, chloroplastic [Malus domestica]","NADA_ARATH RecName: Full=Quinolinate synthase, chloroplastic {ECO:0000303|PubMed:16698895}; EC=2.5.1.72 {ECO:0000269|PubMed:17452319}; AltName: Full=Protein ONSET OF LEAF DEATH 5 {ECO:0000303|PubMed:18978034}; AltName: Full=Protein SULFUR E 3 {ECO:0000303|PubMed:17452319}; Flags: Precursor;","A0A498JMR4_MALDO RecName: Full=Quinolinate synthase {ECO:0000256|ARBA:ARBA00012669}; EC=2.5.1.72 {ECO:0000256|ARBA:ARBA00012669};","--","GO:0009507,chloroplast; GO:0051539,4 iron, 4 sulfur cluster binding; GO:0008047,enzyme activator activity; GO:0046872,metal ion binding; GO:0042803,protein homodimerization activity; GO:0008987,quinolinate synthetase A activity; GO:0034628,'de novo' NAD biosynthetic process from aspartate; GO:0009060,aerobic respiration; GO:0016226,iron-sulfur cluster assembly; GO:0009435,NAD biosynthetic process; GO:0051176,positive regulation of sulfur metabolic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0051536,iron-sulfur cluster binding; GO:0051540,metal cluster binding; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0043167,ion binding; GO:0043169,cation binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016765,transferase activity, transferring alkyl or aryl (other than methyl) groups; GO:0006082,organic acid metabolic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006531,aspartate metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009066,aspartate family amino acid metabolic process; GO:0009117,nucleotide metabolic process; GO:0009165,nucleotide biosynthetic process; GO:0009987,cellular process; GO:0018130,heterocycle biosynthetic process; GO:0019359,nicotinamide nucleotide biosynthetic process; GO:0019362,pyridine nucleotide metabolic process; GO:0019363,pyridine nucleotide biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0034627,'de novo' NAD biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043436,oxoacid metabolic process; GO:0043648,dicarboxylic acid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0046496,nicotinamide nucleotide metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0072524,pyridine-containing compound metabolic process; GO:0072525,pyridine-containing compound biosynthetic process; GO:0090407,organophosphate biosynthetic process; GO:1901293,nucleoside phosphate biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901605,alpha-amino acid metabolic process; GO:0006091,generation of precursor metabolites and energy; GO:0015980,energy derivation by oxidation of organic compounds; GO:0045333,cellular respiration; GO:0006790,sulfur compound metabolic process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0031163,metallo-sulfur cluster assembly; GO:0044085,cellular component biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0009893,positive regulation of metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0042762,regulation of sulfur metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02445.19:Quinolinate synthetase A protein","--","--","--"]
["MS11G07530",14.6844,8.2527,4.7886,6.691,7.8571,5.0179,6.895,33.5165,19.1883,26.55,5.0831,3.0227,5.8046,3.1276,2.6013,216,121,69,72,101,62,77,350,255,317,64,45,67,36,30,0.542454529,0.593619682,0.683261479,false,-0.975358749,0.03584487,0.059383584,false,-0.287407249,0.51296201,0.589470927,false,1.380197103,0.009958219,0.018961663,"up",0.85755189,0.425223305,0.576613194,false,2.372254244,"4.6894E-06","6.97312E-05","up",1.668197029,0.000965067,0.057231575,false,-0.805888597,0.247204113,0.429408436,false,0.71531621,0.075539971,0.274454964,false,"chr_0011",7999024,7999652,"+","MS11G07530","--","K13448 calcium-binding protein CML | (RefSeq) putative calcium-binding protein CML19 (A)","ko04626: Plant-pathogen interaction","putative calcium-binding protein CML19 [Pyrus x bretschneideri]","CML19_ORYSJ RecName: Full=Putative calcium-binding protein CML19; AltName: Full=Calmodulin-like protein 19;","A0A5N5H493_9ROSA SubName: Full=Calcium-binding protein CML19 {ECO:0000313|EMBL:KAB2620912.1};","Calmodulin and related proteins (EF-Hand superfamily)","GO:0005509,calcium ion binding; GO:0030234,enzyme regulator activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0098772,molecular function regulator activity","PF00036.35:EF hand","--","--","--"]
["MS11G08720",18.6771,7.4689,9.8665,83.1635,141.386,62.0401,127.3062,114.3597,121.7252,86.9225,62.6227,58.6149,94.3401,59.8207,77.3642,715,285,370,2329,4730,1995,3700,3108,4210,2701,2052,2271,2834,1792,2322,2.722642539,"8.41703E-16","1.36334E-14","up",2.975375038,"3.13968E-20","4.80501E-19","up",3.221167009,"3.43006E-15","3.75617E-14","up",3.614114924,"2.11644E-31","5.76595E-30","up",0.905369735,"1.41378E-05",0.000101184,false,0.653660736,0.001020257,0.006714286,false,0.386144439,0.229810162,0.686896626,false,0.519378633,0.133778375,0.283020326,false,0.274306096,0.417195812,0.696532558,false,"chr_0011",9486518,9489154,"+","MS11G08720","--","--","--","uncharacterized protein LOC103438661 [Malus domestica]","--","A0A498JLI7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH95916.1};","--","--","PF07712.15:Stress up-regulated Nod 19","--","--","--"]
["MS11G09440",1.651,1.546,0.8146,0.2633,0,0.2948,0.0362,0,0,1.695,1.8003,1.7673,0.6663,1.3363,0.737,60,56,29,7,0,9,1,0,0,50,56,65,19,38,21,0.571913425,0.105119263,0.166419123,false,-0.267718538,0.548043546,0.624809247,false,-2.676834307,0.000291764,0.000758994,"down",-6.461773498,"4.83664E-07","1.90911E-06","down",-7.019282043,"1.32178E-08","1.77734E-07","down",-6.178726034,"2.2222E-06","3.66041E-05","down","NA","NA","NA","NA",-3.235530145,"1.73561E-07","3.51419E-06","down",-2.387674091,0.001989123,0.022439771,"down","chr_0011",10619562,10621887,"+","MS11G09440","--","--","--","hypothetical protein DVH24_008343 [Malus domestica]","IQD17_ARATH RecName: Full=Protein IQ-DOMAIN 17 {ECO:0000303|PubMed:16368012}; Short=AtIQD17 {ECO:0000303|PubMed:16368012};","A0A498JPQ3_MALDO RecName: Full=DUF4005 domain-containing protein {ECO:0000259|Pfam:PF13178};","--","GO:0005737,cytoplasm; GO:0005856,cytoskeleton; GO:0005886,plasma membrane; GO:0005516,calmodulin binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0016020,membrane; GO:0071944,cell periphery","PF13178.9:Protein of unknown function (DUF4005)","--","--","--"]
["MS11G09960",0.6269,0.3145,0.3733,1.714,1.2255,1.1817,1.0666,0.5519,0.9831,1.8022,1.9226,1.8067,1.5646,1.6691,1.4993,24,12,14,48,41,38,31,15,34,56,63,70,47,50,45,2.255981322,"1.90552E-09","1.498E-08","up",2.137173431,"4.95108E-08","2.31612E-07","up",1.858633451,"2.47318E-05","7.77396E-05","up",1.2652085,0.01106542,0.020847081,"up",-0.973824196,0.005472884,0.018609379,false,-0.853041245,0.019372229,0.070589362,false,-0.592476431,0.139752358,0.594095951,false,-0.382842337,0.219272355,0.396205621,false,-0.25647296,0.423613132,0.701946592,false,"chr_0011",11436905,11438634,"-","MS11G09960","--","--","--","hypothetical protein C1H46_017914 [Malus baccata]","DVL12_ARATH RecName: Full=Small polypeptide DEVIL 12 {ECO:0000303|PubMed:14871303}; AltName: Full=Small polypeptide ROTUNDIFOLIA LIKE 22 {ECO:0000303|PubMed:15125775}; Short=Small polypeptide ROT-FOUR-LIKE 22 {ECO:0000303|PubMed:15125775};","A0A540MDB1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD96419.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0008285,negative regulation of cell population proliferation; GO:0048367,shoot system development; GO:0008150,biological_process; GO:0008283,cell population proliferation; GO:0009987,cellular process; GO:0042127,regulation of cell population proliferation; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","--","--","--","--"]
["MS11G10960",6.4689,4.9458,3.7573,11.8005,12.4564,11.8172,10.1072,9.4577,11.9501,8.9863,9.043,9.301,11.001,11.488,10.0434,290,221,165,387,488,445,344,301,484,327,347,422,387,403,353,1.031917312,"1.00235E-05","4.33936E-05","up",1.388225479,"1.60452E-09","9.11048E-09","up",1.461572713,"2.09294E-09","1.20557E-08","up",1.329547965,"3.59434E-08","1.64257E-07","up",0.31334713,0.041683683,0.099434555,false,-0.041378138,0.799073617,0.889241332,false,-0.13250276,0.428357868,0.818729945,false,0.447869189,0.003437353,0.017049824,false,0.098998471,0.534038944,0.781918095,false,"chr_0011",13031885,13034508,"-","MS11G10960","--","K01792 glucose-6-phosphate 1-epimerase [EC:5.1.3.15] | (RefSeq) putative glucose-6-phosphate 1-epimerase (A)","ko00010: Glycolysis / Gluconeogenesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","putative glucose-6-phosphate 1-epimerase [Malus domestica]","AAPC_CENCI RecName: Full=Putative glucose-6-phosphate 1-epimerase {ECO:0000250|UniProtKB:Q03161}; EC=5.1.3.15 {ECO:0000250|UniProtKB:Q03161}; AltName: Full=Putative D-hexose-6-phosphate mutarotase {ECO:0000250|UniProtKB:Q03161}; AltName: Full=Putative apospory-associated protein C;","A0A498JKX5_MALDO RecName: Full=Glucose-6-phosphate 1-epimerase {ECO:0000256|ARBA:ARBA00012083, ECO:0000256|PIRNR:PIRNR016020}; EC=5.1.3.15 {ECO:0000256|ARBA:ARBA00012083, ECO:0000256|PIRNR:PIRNR016020};","Uncharacterized enzymes related to aldose 1-epimerase","GO:0030246,carbohydrate binding; GO:0047938,glucose-6-phosphate 1-epimerase activity; GO:0005975,carbohydrate metabolic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0003824,catalytic activity; GO:0016853,isomerase activity; GO:0016854,racemase and epimerase activity; GO:0016857,racemase and epimerase activity, acting on carbohydrates and derivatives; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process","PF01263.23:Aldose 1-epimerase","--","--","--"]
["MS11G12240",0.0212,0.0426,0,2.7296,0.5105,0.784,2.1265,2.8426,2.4453,0,0.0496,0.1049,0.2436,0.3258,0.1084,1,2,0,94,21,31,76,95,104,0,2,5,9,12,4,"NA","NA","NA","NA","NA","NA","NA","NA",6.178815446,"1.45509E-08","7.48945E-08","up",7.133280235,"7.66417E-16","7.70041E-15","up",5.606473251,"1.23392E-18","6.04321E-17","up",3.45671575,"4.69844E-16","5.09155E-14","up",0.961653491,0.085620442,0.500332548,false,4.698094157,"4.29207E-07","7.82525E-06","up",2.507547737,0.000478094,0.007572462,"up","chr_0011",15882693,15884705,"-","MS11G12240","--","K09840 9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51] | (RefSeq) probable carotenoid cleavage dioxygenase 4, chloroplastic (A)","ko00906: Carotenoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","hypothetical protein C1H46_039653 [Malus baccata]","CCD4_ARATH RecName: Full=Probable carotenoid cleavage dioxygenase 4, chloroplastic {ECO:0000305}; Short=AtCCD4 {ECO:0000305}; EC=1.14.99.- {ECO:0000250|UniProtKB:O65572}; AltName: Full=AtNCED4 {ECO:0000303|PubMed:11532178, ECO:0000303|PubMed:15340011}; Flags: Precursor;","A0A540KKS4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD74816.1};","Beta, beta-carotene 15,15'-dioxygenase and related enzymes","GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0005829,cytosol; GO:0010287,plastoglobule; GO:0010436,carotenoid dioxygenase activity; GO:0046872,metal ion binding; GO:1901811,beta-carotene catabolic process; GO:0016121,carotene catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016701,oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; GO:0016702,oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:0051213,dioxygenase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008300,isoprenoid catabolic process; GO:0009056,catabolic process; GO:0009987,cellular process; GO:0016042,lipid catabolic process; GO:0016108,tetraterpenoid metabolic process; GO:0016110,tetraterpenoid catabolic process; GO:0016115,terpenoid catabolic process; GO:0016116,carotenoid metabolic process; GO:0016118,carotenoid catabolic process; GO:0016119,carotene metabolic process; GO:0042214,terpene metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044242,cellular lipid catabolic process; GO:0044248,cellular catabolic process; GO:0044255,cellular lipid metabolic process; GO:0046247,terpene catabolic process; GO:0071704,organic substance metabolic process; GO:0120252,hydrocarbon metabolic process; GO:0120253,hydrocarbon catabolic process; GO:1901575,organic substance catabolic process; GO:1901810,beta-carotene metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma","PF03055.18:Retinal pigment epithelial membrane protein","--","--","--"]
["MS11G12420",2.1578,1.0672,1.0859,0,0,0,0,0,0,0,0,0,0,0,0,71,35,35,0,0,0,0,0,0,0,0,0,0,0,0,-7.654692331,"3.1577E-09","2.41121E-08","down",-7.367875914,"1.10912E-08","5.64636E-08","down",-7.497281306,"8.54647E-09","4.53447E-08","down",-7.382036336,"1.26908E-08","6.15203E-08","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0011",16440045,16449854,"+","MS11G12420","--","K01919 glutamate--cysteine ligase [EC:6.3.2.2] | (RefSeq) LOW QUALITY PROTEIN: glutamate--cysteine ligase, chloroplastic-like (A)","ko00270: Cysteine and methionine metabolism; ko00480: Glutathione metabolism; ko01100: Metabolic pathways; ko01240: Biosynthesis of cofactors","hypothetical protein DVH24_008044 [Malus domestica]","GSH1_TOBAC RecName: Full=Glutamate--cysteine ligase, chloroplastic; EC=6.3.2.2; AltName: Full=Gamma-ECS; Short=GCS; AltName: Full=Gamma-glutamylcysteine synthetase; Flags: Precursor;","A0A498JNX2_MALDO RecName: Full=Glutamate--cysteine ligase {ECO:0000256|PIRNR:PIRNR017901}; EC=6.3.2.2 {ECO:0000256|PIRNR:PIRNR017901};","--","GO:0009507,chloroplast; GO:0005524,ATP binding; GO:0004357,glutamate-cysteine ligase activity; GO:0006750,glutathione biosynthetic process; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016874,ligase activity; GO:0016879,ligase activity, forming carbon-nitrogen bonds; GO:0016881,acid-amino acid ligase activity; GO:0006518,peptide metabolic process; GO:0006575,cellular modified amino acid metabolic process; GO:0006749,glutathione metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0019184,nonribosomal peptide biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042398,cellular modified amino acid biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044272,sulfur compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF04107.16:Glutamate-cysteine ligase family 2(GCS2)","--","--","--"]
["MS11G13930",5.8325,5.4511,3.8858,12.5468,10.8192,16.9934,13.7071,11.4155,12.3,11.043,10.2928,11.5562,12.9877,15.9271,15.9357,190,177,124,299,308,465,339,264,362,292,287,381,332,406,407,1.301520699,"2.09581E-09","1.63585E-08","up",1.850397671,"1.70079E-18","2.30336E-17","up",1.613645327,"1.28902E-10","8.68857E-10","up",1.582343472,"2.20393E-12","1.62657E-11","up",0.294291076,0.080494332,0.166948161,false,-0.25334597,0.138388398,0.2964748,false,-0.03274173,0.873549088,0.971142548,false,0.329889664,0.102724694,0.235060131,false,-0.212221389,0.292625744,0.585462709,false,"chr_0011",22448093,22449668,"+","MS11G13930","--","--","--","hypothetical protein DVH24_036042 [Malus domestica]","AHL24_ARATH RecName: Full=AT-hook motif nuclear-localized protein 24 {ECO:0000312|EMBL:FAA00295.1};","A0A498JU81_MALDO RecName: Full=AT-hook motif nuclear-localized protein {ECO:0000256|PIRNR:PIRNR016021};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0003680,minor groove of adenine-thymine-rich DNA binding; GO:0010228,vegetative to reproductive phase transition of meristem; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0000217,DNA secondary structure binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009791,post-embryonic development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03479.18:Plants and Prokaryotes Conserved (PCC) domain","--","--","--"]
["MS11G14880",3.9879,5.8231,2.096,0,0,0.188,0,0.1112,0,0.4864,1.2916,1.4045,0.0503,0.0505,0.0504,101,147,52,0,0,4,0,2,0,10,28,36,1,1,1,-1.728612193,0.000494431,0.001510799,"down",-6.014866671,"2.10854E-10","1.31949E-09","down",-5.757901168,"1.80264E-10","1.19266E-09","down",-6.607353939,"4.31823E-09","2.21114E-08","down",-4.841753304,"8.05806E-05",0.000475482,"down","NA","NA","NA","NA","NA","NA","NA","NA",-4.023059765,0.000166252,0.001399584,"down","NA","NA","NA","NA","chr_0011",27387985,27392692,"-","MS11G14880","--","K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) probable pectinesterase 53 (A)","ko00040: Pentose and glucuronate interconversions; ko01100: Metabolic pathways","hypothetical protein DVH24_035926 [Malus domestica]","PME68_ARATH RecName: Full=Probable pectinesterase 68; Short=PE 68; EC=3.1.1.11; AltName: Full=Pectin methylesterase 68; Short=AtPME68; Flags: Precursor;","A0A498JND3_MALDO RecName: Full=Pectinesterase {ECO:0000256|RuleBase:RU000589}; EC=3.1.1.11 {ECO:0000256|RuleBase:RU000589};","--","GO:0005576,extracellular region; GO:0045330,aspartyl esterase activity; GO:0052689,carboxylic ester hydrolase activity; GO:0030599,pectinesterase activity; GO:0042545,cell wall modification; GO:0045490,pectin catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071840,cellular component organization or biogenesis; GO:0000272,polysaccharide catabolic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0010393,galacturonan metabolic process; GO:0016052,carbohydrate catabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0045488,pectin metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF01095.22:Pectinesterase","--","--","--"]
["MS11G16400",13.3117,13.1282,11.7138,5.2543,6.3712,5.3498,5.584,7.4048,9.0095,6.1978,7.3302,5.5572,5.0424,3.8285,5.9841,471,463,406,136,197,159,150,186,288,178,222,199,140,106,166,-0.817811915,"3.17415E-06","1.51143E-05",false,-1.06987007,"2.75212E-07","1.15929E-06","down",-0.950072393,"8.83308E-07","3.50896E-06",false,-0.516666402,0.013255771,0.024541614,false,0.313586941,0.182755556,0.312694514,false,0.570089813,0.028223638,0.094293461,false,0.431854154,0.084404166,0.497455257,false,-0.115948557,0.604355801,0.761669691,false,0.145980764,0.563657818,0.798704943,false,"chr_0011",30759075,30765680,"-","MS11G16400","--","--","--","uncharacterized protein LOC103436947 [Malus domestica]","--","A0A498JQC2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH97117.1};","--","--","PF05142.15:Domain of unknown function (DUF702)","SRS","TF","SRS"]
["MS11G17560",2.0797,1.9847,1.3463,3.3977,2.0896,4.7103,2.9398,1.7148,2.7512,2.8747,3.9705,5.5633,1.6161,4.0839,2.2645,41,39,26,49,36,78,44,24,49,46,67,111,25,63,35,1.379683363,0.000139975,0.000486365,"up",0.840810468,0.049830656,0.079319254,false,1.110117715,0.005632285,0.011352229,"up",0.73230714,0.057142745,0.090430165,false,-0.632914305,0.087526481,0.178151134,false,-0.094818256,0.827052134,0.905564392,false,-0.377707236,0.339206846,0.771882933,false,-0.251540046,0.517213404,0.696240709,false,0.291730009,0.511935614,0.766279942,false,"chr_0011",32596125,32597369,"-","MS11G17560","--","--","--","late embryogenesis abundant protein 6 [Malus sylvestris]","LEA18_ARATH RecName: Full=Late embryogenesis abundant protein 18 {ECO:0000303|PubMed:18318901}; AltName: Full=Late embryogenesis abundant protein 4-2 {ECO:0000303|PubMed:20668063}; Short=AtLEA4-2 {ECO:0000303|PubMed:20668063};","A0A498JPN5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH97016.1};","--","GO:0005829,cytosol; GO:0009793,embryo development ending in seed dormancy; GO:0048868,pollen tube development; GO:0006970,response to osmotic stress; GO:0009414,response to water deprivation; GO:0048316,seed development; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0009856,pollination; GO:0044706,multi-multicellular organism process; GO:0006950,response to stress; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:0010035,response to inorganic substance; GO:0042221,response to chemical; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF03760.18:Late embryogenesis abundant (LEA) group 1","--","--","--"]
["MS11G18020",12.877,14.3814,19.098,1.3285,1.4828,1.3498,1.3868,1.483,1.255,5.8867,10.2186,5.2014,6.5021,6.8308,6.0946,159,177,231,12,16,14,13,13,14,59,108,65,63,66,59,-0.942016513,0.001882275,0.00497573,false,-0.958090984,"6.64683E-05",0.000194422,false,-3.255899078,"1.01517E-21","1.98933E-20","down",-3.210908383,"5.41271E-21","7.87423E-20","down",-2.256167869,"1.57635E-07","1.7403E-06","down",-2.236772988,"1.25888E-09","4.38754E-08","down","NA","NA","NA","NA",-2.300240709,"1.00189E-07","2.13039E-06","down",-2.271689481,"3.78212E-10","5.31402E-08","down","chr_0011",33452554,33453274,"+","MS11G18020","--","--","--","hypothetical protein DVH24_035630 [Malus domestica]","--","A0A498JTT9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH96962.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["MS11G19390",12.6891,12.076,15.0721,4.9173,3.2116,5.2472,3.9572,3.7864,4.813,3.5429,5.1955,3.8082,4.1937,3.5109,2.9622,1284,1218,1494,364,284,446,304,272,440,291,450,390,333,278,235,-1.484300906,"4.98723E-17","9.11426E-16","down",-1.603559958,"1.46744E-18","1.99834E-17","down",-1.366630134,"5.41313E-11","3.80452E-10","down",-1.382054536,"7.80176E-19","9.81405E-18","down",0.113243858,0.570300166,0.703855862,false,0.236841634,0.245622054,0.436298807,false,-0.015921036,0.941965897,0.985407497,false,0.131967251,0.582394224,0.745663931,false,0.26135192,0.275696084,0.566600731,false,"chr_0011",36029350,36044560,"+","MS11G19390","--","K12385 Niemann-Pick C1 protein | (RefSeq) NPC intracellular cholesterol transporter 1-like (A)","--","NPC intracellular cholesterol transporter 1-like [Malus domestica]","--","A0A5N5HVS3_9ROSA SubName: Full=Niemann-Pick C1 protein-like {ECO:0000313|EMBL:KAB2632025.1};","Cholesterol transport protein (Niemann-Pick C disease protein)","GO:0016021,integral component of membrane; GO:0005319,lipid transporter activity; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF02460.21:Patched family","--","--","--"]
["MS12G00310",1.1564,1.1601,1.0083,0.0329,0,0.1147,0,0.0339,0,0.3562,0.5066,0.0952,0,0.5542,0.0615,48,48,41,1,0,4,0,1,0,12,18,4,0,18,2,-1.633857276,0.00261424,0.006679353,"down",-2.154287877,0.011517126,0.02155912,"down",-4.289298649,"5.68093E-08","2.67487E-07","down",-6.376902085,"3.768E-07","1.50892E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0012",240180,242998,"-","MS12G00310","--","K13422 transcription factor MYC2 | (RefSeq) transcription factor MYC2-like (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction","hypothetical protein DVH24_037472 [Malus domestica]","ICE1_ARATH RecName: Full=Transcription factor ICE1; AltName: Full=Basic helix-loop-helix protein 116; Short=AtbHLH116; Short=bHLH 116; AltName: Full=Inducer of CBF expression 1; AltName: Full=Transcription factor EN 45; AltName: Full=Transcription factor SCREAM; AltName: Full=bHLH transcription factor bHLH116;","A0A498HE06_MALDO RecName: Full=Aspartate kinase {ECO:0000256|ARBA:ARBA00013059}; EC=2.7.2.4 {ECO:0000256|ARBA:ARBA00013059};","--","GO:0005634,nucleus; GO:0000987,cis-regulatory region sequence-specific DNA binding; GO:0001046,core promoter sequence-specific DNA binding; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0046983,protein dimerization activity; GO:0043565,sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0009738,abscisic acid-activated signaling pathway; GO:0009960,endosperm development; GO:0045892,negative regulation of DNA-templated transcription; GO:0045893,positive regulation of DNA-templated transcription; GO:0010115,regulation of abscisic acid biosynthetic process; GO:0006355,regulation of DNA-templated transcription; GO:0009409,response to cold; GO:0050826,response to freezing; GO:0010162,seed dormancy process; GO:0048317,seed morphogenesis; GO:0010440,stomatal lineage progression; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0140110,transcription regulator activity; GO:0005515,protein binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009888,tissue development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010557,positive regulation of macromolecule biosynthetic process; GO:0010604,positive regulation of macromolecule metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0045935,positive regulation of nucleobase-containing compound metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0051173,positive regulation of nitrogen compound metabolic process; GO:0051254,positive regulation of RNA metabolic process; GO:1902680,positive regulation of RNA biosynthetic process; GO:1903508,positive regulation of nucleic acid-templated transcription; GO:0006066,alcohol metabolic process; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006714,sesquiterpenoid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009687,abscisic acid metabolic process; GO:0009688,abscisic acid biosynthetic process; GO:0010565,regulation of cellular ketone metabolic process; GO:0016053,organic acid biosynthetic process; GO:0016106,sesquiterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0019216,regulation of lipid metabolic process; GO:0019747,regulation of isoprenoid metabolic process; GO:0019748,secondary metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042180,cellular ketone metabolic process; GO:0043288,apocarotenoid metabolic process; GO:0043289,apocarotenoid biosynthetic process; GO:0043436,oxoacid metabolic process; GO:0043455,regulation of secondary metabolic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046165,alcohol biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0046890,regulation of lipid biosynthetic process; GO:0062012,regulation of small molecule metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:0120254,olefinic compound metabolic process; GO:0120255,olefinic compound biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:1902644,tertiary alcohol metabolic process; GO:1902645,tertiary alcohol biosynthetic process; GO:1902930,regulation of alcohol biosynthetic process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0010431,seed maturation; GO:0021700,developmental maturation; GO:0022611,dormancy process; GO:0032504,multicellular organism reproduction; GO:0048609,multicellular organismal reproductive process; GO:0071695,anatomical structure maturation; GO:0009653,anatomical structure morphogenesis; GO:0090698,post-embryonic plant morphogenesis; GO:0010374,stomatal complex development; GO:0048869,cellular developmental process; GO:0090558,plant epidermis development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00010.29:Helix-loop-helix DNA-binding domain","bHLH","TF","bHLH"]
["MS12G01220",0.9503,1.3165,1.201,0.2474,0,0.2155,0.0596,0.1275,0.1002,0.0557,0.1586,0.1788,0.0577,0,0,21,29,26,4,0,4,1,2,2,1,3,4,1,0,0,-2.92877055,"4.2296E-05",0.00016226,"down",-5.510759794,"2.2921E-05","7.24555E-05","down",-2.738322289,0.000447789,0.001124322,"down",-3.318805471,"6.4517E-05",0.000184733,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0012",1017488,1018432,"+","MS12G01220","--","--","--","uncharacterized protein LOC103404222 [Malus domestica]","--","A0A498J140_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89288.1};","--","--","--","--","--","--"]
["MS12G01420",0.1698,0.1022,0.3121,0.4643,0.3498,0.3639,0.3132,0.1435,0.0376,1.0043,0.9127,1.0068,0.4761,0.2604,0.3899,5,3,9,10,9,9,7,3,1,24,23,30,11,6,9,2.51900475,"1.28025E-05","5.41152E-05","up","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-2.483436207,0.000482331,0.002298457,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.274275661,0.011074493,0.043553843,"down","NA","NA","NA","NA","chr_0012",1201959,1203481,"+","MS12G01420","--","K09422 transcription factor MYB, plant | (RefSeq) LOW QUALITY PROTEIN: transcription factor MYB20 (A)","--","myb-related protein 315-like [Malus sylvestris]","MYB15_ANTMA RecName: Full=Myb-related protein 315;","A0A678R5M9_MALDO SubName: Full=MYB domain class transcription factor {ECO:0000313|EMBL:AUZ96347.1};","Transcription factor, Myb superfamily","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","MYB","TF","MYB->MYB"]
["MS12G02210",2.9094,3.0546,3.2118,0.5087,0.9291,1.0874,0.5347,0.2383,0.4868,1.7505,2.1343,1.5042,1.2502,0.8647,0.7335,86,90,93,11,24,27,12,5,13,42,54,45,29,20,17,-0.587344132,0.0272728,0.052435817,false,-1.391486143,"2.17221E-05","6.89602E-05","down",-1.636257263,"3.23204E-06","1.1818E-05","down",-2.568983957,"1.19059E-10","7.33787E-10","down",-1.974719637,"1.98982E-05",0.000137693,"down",-1.168010494,0.033056088,0.106355205,false,-0.935919655,0.106870934,0.541984218,false,-1.038145035,0.01315342,0.049848061,"down",-0.223895917,0.646246266,0.846481335,false,"chr_0012",2080875,2082703,"-","MS12G02210","--","K11584 serine/threonine-protein phosphatase 2A regulatory subunit B' | (RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like (A)","ko03015: mRNA surveillance pathway","serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like [Malus domestica]","2A5K_ARATH RecName: Full=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform; Short=AtB' kappa; Short=PP2A, B' subunit, kappa isoform;","A0A540K4P0_MALBA RecName: Full=Serine/threonine protein phosphatase 2A regulatory subunit {ECO:0000256|PIRNR:PIRNR028043};","Serine/threonine protein phosphatase 2A, regulatory subunit","GO:0005737,cytoplasm; GO:0000159,protein phosphatase type 2A complex; GO:0019888,protein phosphatase regulator activity; GO:0007165,signal transduction; GO:0003674,molecular_function; GO:0019208,phosphatase regulator activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0007154,cell communication; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0008287,protein serine/threonine phosphatase complex; GO:0032991,protein-containing complex; GO:1902494,catalytic complex; GO:1903293,phosphatase complex","PF01603.23:Protein phosphatase 2A regulatory B subunit (B56 family)","--","--","--"]
["MS12G02950",3.3552,3.5094,4.0082,0.9759,1.062,1.1048,1.3634,0.6536,0.4346,3.0782,4.3786,2.8215,1.9105,2.3264,1.3658,94,98,110,20,26,26,29,13,11,70,105,80,42,51,30,0.099755968,0.695227014,0.769981767,false,-0.6619667,0.022192179,0.038802443,false,-1.572374228,"1.66221E-07","7.35451E-07","down",-1.866304177,"1.29949E-05","4.16906E-05","down",-1.956803894,"2.42292E-05",0.000163987,"down",-1.189316593,0.018358861,0.067703191,false,-0.294625662,0.58493107,0.886489179,false,-1.657650158,"1.33886E-06","2.13878E-05","down",-0.884975316,0.020514393,0.118363435,false,"chr_0012",2856025,2857745,"+","MS12G02950","--","--","--","hypothetical protein DVH24_037192 [Malus domestica]","GASAE_ARATH RecName: Full=Gibberellin-regulated protein 14; AltName: Full=GAST1 protein homolog 14; Flags: Precursor;","A0A498HD67_MALDO RecName: Full=HMA domain-containing protein {ECO:0000259|PROSITE:PS50846};","--","GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0009536,plastid; GO:0009740,gibberellic acid mediated signaling pathway; GO:2000377,regulation of reactive oxygen species metabolic process; GO:0009737,response to abscisic acid; GO:0009739,response to gibberellin; GO:0009651,response to salt stress; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010476,gibberellin mediated signaling pathway; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0008152,metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0044237,cellular metabolic process; GO:0072593,reactive oxygen species metabolic process; GO:0097305,response to alcohol; GO:0006950,response to stress; GO:0006970,response to osmotic stress; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF02704.17:Gibberellin regulated protein","--","--","--"]
["MS12G03790",36.4214,38.5699,26.4395,2.9503,4.4764,4.9783,0.3554,0.19,0.2986,23.7647,30.8887,21.059,6.3604,10.3432,7.3984,270,285,192,16,29,31,2,1,2,143,196,158,37,60,43,-0.243503973,0.314740901,0.412475426,false,-1.786863935,"1.35307E-10","8.66748E-10","down",-2.813287276,"4.12327E-19","6.4708E-18","down",-6.621559379,"3.92831E-21","5.77121E-20","down",-6.365028809,"1.6417E-19","8.66803E-18","down",-4.818531815,"2.40163E-10","9.77358E-09","down",-3.805858298,"3.91739E-06",0.001421396,"down",-2.553913287,"1.20923E-15","1.07606E-13","down",-1.00252843,0.00946591,0.069375385,false,"chr_0012",3802831,3803946,"+","MS12G03790","--","--","--","gibberellin-regulated protein 4 [Malus domestica]","GASA4_ARATH RecName: Full=Gibberellin-regulated protein 4; AltName: Full=GAST1 protein homolog 4; Flags: Precursor;","A0A540M3X2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD93229.1};","--","GO:0005576,extracellular region; GO:0045454,cell redox homeostasis; GO:0009740,gibberellic acid mediated signaling pathway; GO:0009739,response to gibberellin; GO:0008150,biological_process; GO:0009987,cellular process; GO:0019725,cellular homeostasis; GO:0042592,homeostatic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0010033,response to organic substance; GO:0010476,gibberellin mediated signaling pathway; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF02704.17:Gibberellin regulated protein","--","--","--"]
["MS12G05240",10.7754,11.7967,9.5333,8.2693,6.1868,9.1822,7.9183,5.3257,9.4579,4.2387,3.6662,4.707,4.7218,5.6048,4.6777,285,311,247,160,143,204,159,100,226,91,83,126,98,116,97,-1.159114059,"3.65615E-08","2.39138E-07","down",-0.807325896,"5.14453E-05",0.000153442,false,-0.236179956,0.269123871,0.344557215,false,-0.222277972,0.359390347,0.440828846,false,0.951601835,0.000464952,0.002227222,false,0.60170816,0.02079978,0.074587574,false,0.013549143,0.959323876,0.989353199,false,0.940892825,"8.15905E-05",0.000766416,false,0.595656989,0.008360411,0.063506132,false,"chr_0012",5436942,5438072,"+","MS12G05240","--","--","--","hypothetical protein C1H46_032466 [Malus baccata]","P4KG7_ARATH RecName: Full=Phosphatidylinositol 4-kinase gamma 7 {ECO:0000303|PubMed:17880284}; Short=AtPI4Kgamma7 {ECO:0000303|PubMed:17880284}; Short=PI-4Kgamma7 {ECO:0000303|PubMed:17880284}; Short=PI4K gamma 7 {ECO:0000303|PubMed:17880284}; EC=2.7.1.67 {ECO:0000269|PubMed:17880284}; AltName: Full=Ubiquitin-like domain kinase gamma 7 {ECO:0000303|PubMed:17880284}; Short=UbDK gamma 7 {ECO:0000303|PubMed:17880284};","A0A540L699_MALBA RecName: Full=1-phosphatidylinositol 4-kinase {ECO:0000256|ARBA:ARBA00012169}; EC=2.7.1.67 {ECO:0000256|ARBA:ARBA00012169};","Phosphatidylinositol 4-kinase","GO:0004430,1-phosphatidylinositol 4-kinase activity; GO:0005524,ATP binding; GO:0046854,phosphatidylinositol phosphate biosynthetic process; GO:0046777,protein autophosphorylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0052742,phosphatidylinositol kinase activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006629,lipid metabolic process; GO:0006644,phospholipid metabolic process; GO:0006650,glycerophospholipid metabolic process; GO:0006661,phosphatidylinositol biosynthetic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0008654,phospholipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0019637,organophosphate metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0045017,glycerolipid biosynthetic process; GO:0046474,glycerophospholipid biosynthetic process; GO:0046486,glycerolipid metabolic process; GO:0046488,phosphatidylinositol metabolic process; GO:0071704,organic substance metabolic process; GO:0090407,organophosphate biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006468,protein phosphorylation; GO:0006807,nitrogen compound metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:1901564,organonitrogen compound metabolic process","PF00454.30:Phosphatidylinositol 3- and 4-kinase","--","--","--"]
["MS12G05550",21.1228,27.0651,19.799,5.6761,5.4894,6.7549,6.1488,5.1588,7.7934,6.609,7.4726,6.167,5.1273,4.087,5.8884,819,1046,752,161,186,220,181,142,273,208,248,242,156,124,179,-1.56463323,"1.23239E-16","2.16261E-15","down",-1.879654971,"4.32503E-19","6.09197E-18","down",-1.713972579,"7.54581E-18","1.05274E-16","down",-1.553942724,"4.84262E-13","3.80026E-12","down",0.024859612,0.905651112,0.94331063,false,0.343008058,0.146992812,0.308629141,false,0.159985547,0.45491626,0.832497536,false,-0.132311036,0.47610111,0.660496639,false,0.191092469,0.378704763,0.663364821,false,"chr_0012",5707912,5712742,"-","MS12G05550","--","K20242 ecotropic viral integration site 5 protein | (RefSeq) EVI5-like protein (A)","--","EVI5-like protein [Malus domestica]","GAP22_ARATH RecName: Full=Rab GTPase-activating protein 22 {ECO:0000303|PubMed:16332933};","A0A540L681_MALBA RecName: Full=Rab-GAP TBC domain-containing protein {ECO:0000259|PROSITE:PS50086};","Rab6 GTPase activator GAPCenA and related TBC domain proteins","GO:0005634,nucleus; GO:0005777,peroxisome; GO:0005096,GTPase activator activity; GO:0006952,defense response; GO:0003674,molecular_function; GO:0008047,enzyme activator activity; GO:0030234,enzyme regulator activity; GO:0030695,GTPase regulator activity; GO:0060589,nucleoside-triphosphatase regulator activity; GO:0098772,molecular function regulator activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005737,cytoplasm; GO:0042579,microbody","PF00566.21:Rab-GTPase-TBC domain","--","--","--"]
["MS12G06530",1.0263,1.1352,1.3432,1.0072,0.6625,0.5639,0.5199,0.7413,0.5243,0.4215,0.4919,0.65,0.3689,0.3027,0.6713,39,43,50,28,22,18,15,20,18,13,16,25,11,9,20,-0.967642474,0.012614813,0.026905834,false,-1.090959122,0.013625751,0.025108785,"down",-0.438518487,0.270363113,0.345920777,false,-0.693977088,0.080352201,0.122225072,false,0.292212067,0.545413545,0.683234131,false,0.416851949,0.439440362,0.630051974,false,-0.256134588,0.592639465,0.888572525,false,0.553013851,0.256185438,0.440107482,false,0.681002011,0.203065858,0.482447723,false,"chr_0012",7102910,7104534,"+","MS12G06530","--","no KO assigned | (RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g50270-like (A)","--","putative pentatricopeptide repeat-containing protein At1g03510 isoform X1 [Malus domestica]","PPR7_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g03510;","A0A498HBC1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH68140.1};","FOG: PPR repeat","GO:0043231,intracellular membrane-bounded organelle; GO:0003723,RNA binding; GO:0009451,RNA modification; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016070,RNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0110165,cellular anatomical entity","PF13041.9:PPR repeat family","--","--","--"]
["MS12G07590",1.1539,0.5107,0.6583,3.2474,2.3689,1.7373,2.9503,3.5375,2.8173,2.6759,1.6653,1.8778,2.6382,1.7348,2.5106,34,15,19,70,61,43,66,74,75,64,42,56,61,40,58,1.611325827,0.000215974,0.000718318,"up",1.857915819,"5.51222E-06","1.92634E-05","up",1.878184341,"3.19191E-05","9.85736E-05","up",2.283108837,"2.32301E-09","1.23322E-08","up",0.687376118,0.031978138,0.080189175,false,0.438708427,0.143258581,0.303296972,false,0.404979636,0.229661712,0.686864659,false,0.285193757,0.459910976,0.645480712,false,0.043447866,0.904383022,0.966159656,false,"chr_0012",8427690,8430871,"-","MS12G07590","--","K07976 Rab family, other | (RefSeq) septum-promoting GTP-binding protein 1-like (A)","--","septum-promoting GTP-binding protein 1-like [Malus domestica]","RAH1B_ARATH RecName: Full=Ras-related protein RABH1b; Short=AtRABH1b; AltName: Full=Ras-related protein Rab6A; Short=AtRab6A;","A0A498HDT5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH68042.1};","Ras GTPases","GO:0005829,cytosol; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016020,membrane; GO:0000325,plant-type vacuole; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0005802,trans-Golgi network; GO:0005525,GTP binding; GO:0003924,GTPase activity; GO:0006887,exocytosis; GO:0006891,intra-Golgi vesicle-mediated transport; GO:0006886,intracellular protein transport; GO:0052324,plant-type cell wall cellulose biosynthetic process; GO:0001558,regulation of cell growth; GO:0042147,retrograde transport, endosome to Golgi; GO:0006890,retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0019001,guanyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0006810,transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016192,vesicle-mediated transport; GO:0032940,secretion by cell; GO:0046903,secretion; GO:0051179,localization; GO:0051234,establishment of localization; GO:0140352,export from cell; GO:0048193,Golgi vesicle transport; GO:0008104,protein localization; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0009664,plant-type cell wall organization; GO:0009832,plant-type cell wall biogenesis; GO:0010383,cell wall polysaccharide metabolic process; GO:0016043,cellular component organization; GO:0016051,carbohydrate biosynthetic process; GO:0030243,cellulose metabolic process; GO:0030244,cellulose biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034406,cell wall beta-glucan metabolic process; GO:0034410,cell wall beta-glucan biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0042546,cell wall biogenesis; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044038,cell wall macromolecule biosynthetic process; GO:0044042,glucan metabolic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0045229,external encapsulating structure organization; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0052541,plant-type cell wall cellulose metabolic process; GO:0070589,cellular component macromolecule biosynthetic process; GO:0070592,cell wall polysaccharide biosynthetic process; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:1901576,organic substance biosynthetic process; GO:0016049,cell growth; GO:0040007,growth; GO:0040008,regulation of growth; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051128,regulation of cellular component organization; GO:0065007,biological regulation; GO:0016197,endosomal transport; GO:0016482,cytosolic transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0005773,vacuole; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction; GO:0031984,organelle subcompartment; GO:0098791,Golgi apparatus subcompartment","PF00071.25:Ras family","--","--","--"]
["MS12G08450",6.5133,6.2031,8.223,21.7642,17.1928,21.9698,21.6345,12.6761,16.5433,14.0522,16.9099,19.6489,16.5405,17.0494,17.438,414,393,512,1012,955,1173,1044,572,950,725,920,1264,825,848,869,1.459777099,"2.67886E-16","4.53917E-15","up",1.579954541,"8.54328E-27","2.06838E-25","up",1.754265441,"6.22975E-24","1.43622E-22","up",1.567701065,"1.51947E-11","1.02319E-10","up",0.11966385,0.609934702,0.735702978,false,0.001560911,0.994157199,0.997111818,false,-0.190068987,0.406019616,0.808624384,false,0.311436618,0.072601103,0.182576851,false,0.198844177,0.156641791,0.417842092,false,"chr_0012",9425333,9431409,"+","MS12G08450","--","K03131 transcription initiation factor TFIID subunit 6 | (RefSeq) transcription initiation factor TFIID subunit 6 isoform X1 (A)","ko03022: Basal transcription factors","transcription initiation factor TFIID subunit 6 isoform X1 [Malus domestica]","TAF6_ARATH RecName: Full=Transcription initiation factor TFIID subunit 6; AltName: Full=Protein EMBRYO DEFECTIVE 2781; AltName: Full=TATA box associated factor II 59; AltName: Full=TBP-associated factor 6; Short=AtTAF6; AltName: Full=Transcription initiation factor TFIID subunit D5;","A0A540NAU9_MALBA RecName: Full=TAF domain-containing protein {ECO:0000259|SMART:SM00803};","Transcription initiation factor TFIID, subunit TAF6 (also component of histone acetyltransferase SAGA)","GO:0000124,SAGA complex; GO:0046695,SLIK (SAGA-like) complex; GO:0005669,transcription factor TFIID complex; GO:0046982,protein heterodimerization activity; GO:0016251,RNA polymerase II general transcription initiation factor activity; GO:0003713,transcription coactivator activity; GO:0009860,pollen tube growth; GO:0051123,RNA polymerase II preinitiation complex assembly; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0046983,protein dimerization activity; GO:0140223,general transcription initiation factor activity; GO:0003712,transcription coregulator activity; GO:0140110,transcription regulator activity; GO:0000003,reproduction; GO:0000902,cell morphogenesis; GO:0000904,cell morphogenesis involved in differentiation; GO:0003006,developmental process involved in reproduction; GO:0008150,biological_process; GO:0009653,anatomical structure morphogenesis; GO:0009826,unidimensional cell growth; GO:0009856,pollination; GO:0009932,cell tip growth; GO:0009987,cellular process; GO:0016049,cell growth; GO:0022414,reproductive process; GO:0030154,cell differentiation; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0040007,growth; GO:0044706,multi-multicellular organism process; GO:0048468,cell development; GO:0048588,developmental cell growth; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0048868,pollen tube development; GO:0048869,cellular developmental process; GO:0060560,developmental growth involved in morphogenesis; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006352,DNA-templated transcription initiation; GO:0006366,transcription by RNA polymerase II; GO:0006367,transcription initiation at RNA polymerase II promoter; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0016043,cellular component organization; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0022607,cellular component assembly; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0065003,protein-containing complex assembly; GO:0065004,protein-DNA complex assembly; GO:0070897,transcription preinitiation complex assembly; GO:0071704,organic substance metabolic process; GO:0071824,protein-DNA complex subunit organization; GO:0071840,cellular component organization or biogenesis; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0000123,histone acetyltransferase complex; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005654,nucleoplasm; GO:0031248,protein acetyltransferase complex; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0070461,SAGA-type complex; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902493,acetyltransferase complex; GO:1902494,catalytic complex; GO:1905368,peptidase complex; GO:1990234,transferase complex; GO:0000428,DNA-directed RNA polymerase complex; GO:0005667,transcription regulator complex; GO:0016591,RNA polymerase II, holoenzyme; GO:0030880,RNA polymerase complex; GO:0055029,nuclear DNA-directed RNA polymerase complex; GO:0061695,transferase complex, transferring phosphorus-containing groups; GO:0090575,RNA polymerase II transcription regulator complex","PF07571.16:TAF6 C-terminal HEAT repeat domain","--","--","--"]
["MS12G09330",76.6362,64.5884,53.8904,51.028,25.8208,40.4935,27.2265,37.0821,70.5805,22.9258,32.3831,25.1856,25.312,25.6678,23.9485,2751,2311,1895,1340,810,1221,742,945,2289,668,995,915,713,721,674,-1.09942323,"1.8687E-08","1.2771E-07","down",-1.091538191,"4.47213E-10","2.70905E-09","down",-0.528369936,0.050687744,0.080879903,false,-0.270746477,0.388739064,0.47132849,false,0.844554257,0.008787397,0.027679619,false,0.841179184,0.005622729,0.026938673,false,0.263579993,0.465488002,0.838575308,false,0.585256802,0.025961953,0.084159181,false,0.585881581,0.016012758,0.099569459,false,"chr_0012",10466548,10468932,"-","MS12G09330","--","K16285 RING/U-box domain-containing protein [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase XERICO (A)","--","probable E3 ubiquitin-protein ligase XERICO [Malus domestica]","XERIC_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase XERICO; EC=2.3.2.27; AltName: Full=RING-type E3 ubiquitin transferase XERICO;","A0A540NAP5_MALBA RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};","FOG: Predicted E3 ubiquitin ligase","GO:0016021,integral component of membrane; GO:0046872,metal ion binding; GO:0016740,transferase activity; GO:0009688,abscisic acid biosynthetic process; GO:0009687,abscisic acid metabolic process; GO:0016567,protein ubiquitination; GO:0009739,response to gibberellin; GO:0006970,response to osmotic stress; GO:0009651,response to salt stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0006066,alcohol metabolic process; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006714,sesquiterpenoid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0016106,sesquiterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043288,apocarotenoid metabolic process; GO:0043289,apocarotenoid biosynthetic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046165,alcohol biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:0120254,olefinic compound metabolic process; GO:0120255,olefinic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:1902644,tertiary alcohol metabolic process; GO:1902645,tertiary alcohol biosynthetic process; GO:0006807,nitrogen compound metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0070647,protein modification by small protein conjugation or removal; GO:1901564,organonitrogen compound metabolic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:1901700,response to oxygen-containing compound; GO:0006950,response to stress; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF13639.9:Ring finger domain","--","--","--"]
["MS12G10370",111.8843,124.3634,131.1868,70.4509,73.9296,59.8683,63.0327,72.5062,76.0844,50.945,48.2738,58.4872,59.6367,50.3894,58.9129,3493,3870,4012,1609,2017,1570,1494,1607,2146,1291,1290,1848,1461,1231,1442,-1.030836409,"4.71495E-14","6.36798E-13","down",-0.826209293,"5.3981E-10","3.24204E-09",false,-0.625787231,0.000156147,0.00042697,false,-0.512888253,"8.07484E-05",0.000227164,false,0.531742539,0.0003285,0.001645452,false,0.329381288,0.025978869,0.088525212,false,0.110459073,0.539200156,0.870274435,false,0.424154174,0.018493601,0.065012737,false,0.226900639,0.205676636,0.485702804,false,"chr_0012",12274979,12278335,"-","MS12G10370","--","K20723 reticulon-3 | (RefSeq) reticulon-like protein B11 (A)","--","hypothetical protein DVH24_027901 [Malus domestica]","RTNLH_ARATH RecName: Full=Reticulon-like protein B8; Short=AtRTNLB8;","A0A498HBV4_MALDO RecName: Full=Reticulon-like protein {ECO:0000256|RuleBase:RU363132};","Reticulon","GO:0005829,cytosol; GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0005739,mitochondrion; GO:0009617,response to bacterium; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0005783,endoplasmic reticulum; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0031224,intrinsic component of membrane","PF02453.20:Reticulon","--","--","--"]
["MS12G11330",1.3512,1.1397,0.9155,0.6538,0.8757,1.0962,0.6773,0.859,0.7809,0.5893,0.2515,0.4726,0.4572,0.4737,0.2135,113,95,75,40,64,77,43,51,59,40,18,40,30,31,14,-1.181676099,0.002111809,0.005508524,"down",-1.282502807,0.000624906,0.001533681,"down",-0.16494754,0.595233966,0.665352157,false,-0.278291854,0.342476109,0.423650264,false,0.91995318,0.022524812,0.06012967,false,1.02044539,0.009912058,0.042199444,"up",-0.114726177,0.716738856,0.927949742,false,1.034387843,0.013972212,0.052303832,false,1.14202835,0.005446181,0.046277515,"up","chr_0012",13476840,13480501,"+","MS12G11330","--","K20718 LRR receptor-like serine/threonine-protein kinase ERECTA [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase ERECTA isoform X2 (A)","ko04016: MAPK signaling pathway - plant","hypothetical protein DVH24_027809 [Malus domestica]","RPK1_IPONI RecName: Full=Receptor-like protein kinase; EC=2.7.11.1; Flags: Precursor;","A0A498HCS4_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0005576,extracellular region; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0019199,transmembrane receptor protein kinase activity; GO:0050832,defense response to fungus; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0004888,transmembrane signaling receptor activity; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["MS12G11550",0.9615,1.8785,1.2915,3.6663,2.9533,3.0725,3.1328,2.2098,3.1367,0.6858,1.6554,1.9501,1.0318,1.8108,1.8073,19,37,25,53,51,51,47,31,56,11,28,39,16,28,28,0.23799193,0.637739807,0.720765251,false,0.459054796,0.306133668,0.384859338,false,1.44286358,0.000122945,0.000342855,"up",1.319949873,0.000723895,0.001722732,"up",1.090945962,0.012946336,0.038073676,"up",0.876729511,0.022281498,0.078527241,false,-0.12213772,0.69645955,0.922324764,false,1.218741002,0.004240464,0.020153031,"up",1.007987556,0.005896699,0.04909724,"up","chr_0012",13759297,13760141,"+","MS12G11550","--","K13434 pathogenesis-related genes transcriptional activator PTI6 | (RefSeq) pathogenesis-related genes transcriptional activator PTI6 (A)","ko04626: Plant-pathogen interaction","hypothetical protein DVH24_027786 [Malus domestica]","PTI6_SOLLC RecName: Full=Pathogenesis-related genes transcriptional activator PTI6; AltName: Full=PTO-interacting protein 6;","A0A498H9G9_MALDO RecName: Full=AP2/ERF domain-containing protein {ECO:0000259|PROSITE:PS51032};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0006952,defense response; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00847.23:AP2 domain","AP2/ERF-ERF","TF","AP2/ERF->AP2/ERF-ERF"]
["MS12G12800",2.9414,2.8899,3.3961,2.3015,0.9749,3.1636,1.6299,1.6859,2.2004,1.1496,1.185,1.2026,0.5946,1.0629,1.3972,145,142,164,83,42,131,61,59,98,46,50,60,23,41,54,-1.195260418,"1.44741E-07","8.60437E-07","down",-1.30587009,"2.23628E-05","7.08572E-05","down",-0.323311846,0.397498049,0.47778254,false,-0.456776377,0.046402665,0.075193599,false,0.750916535,0.005930344,0.01990751,false,0.862477183,0.015676332,0.060009838,false,-0.134241562,0.740894701,0.935989591,false,0.886368554,0.033674277,0.102598659,false,1.004792606,0.032140458,0.159998064,false,"chr_0012",16229136,16233602,"+","MS12G12800","--","K15032 mTERF domain-containing protein, mitochondrial | (RefSeq) uncharacterized protein LOC103405399 isoform X1 (A)","--","hypothetical protein C1H46_001906 [Malus baccata]","MTEF2_ARATH RecName: Full=Transcription termination factor MTERF2, chloroplastic {ECO:0000305}; AltName: Full=Mitochondrial transcription termination factor 2 {ECO:0000303|PubMed:23087700}; AltName: Full=Protein EMBRYO DEFECTIVE 2219 {ECO:0000303|PubMed:15266054}; Flags: Precursor;","A0A540NNC8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE12515.1};","Mitochondrial transcription termination factor, mTERF","GO:0009507,chloroplast; GO:0009506,plasmodesma; GO:0003690,double-stranded DNA binding; GO:0032502,developmental process; GO:0006353,DNA-templated transcription termination; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0008150,biological_process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0080090,regulation of primary metabolic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF02536.17:mTERF","mTERF","TR","mTERF"]
["MS12G13790",0.1481,0.1828,0.2558,0.4204,0.391,0.339,0.3151,0.1444,0.4665,0.8139,0.2795,0.619,0.4355,0.3639,0.2906,13,16,22,27,30,25,21,9,37,58,21,55,30,25,20,1.752203177,0.00065507,0.001940204,"up",1.193235011,0.007772516,0.015154584,"up",1.191890472,0.006926229,0.013719802,"up",0.945203639,0.083803556,0.126787825,false,-0.792531943,0.162346225,0.28627518,false,-0.228186081,0.649495816,0.793707119,false,-0.246483098,0.618589358,0.89813195,false,-0.537744976,0.268094997,0.453757016,false,0.024884128,0.950474847,0.984482633,false,"chr_0012",18822641,18826618,"-","MS12G13790","--","K07904 Ras-related protein Rab-11A | (RefSeq) ras-related protein Rab2BV (A)","ko04144: Endocytosis","uncharacterized protein LOC103401496 isoform X1 [Malus domestica]","RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV;","A0A540N759_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE06888.1};","GTPase Rab11/YPT3, small G protein superfamily","GO:0009504,cell plate; GO:0005768,endosome; GO:0005886,plasma membrane; GO:0005525,GTP binding; GO:0003924,GTPase activity; GO:0042546,cell wall biogenesis; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0019001,guanyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0044085,cellular component biogenesis; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0016020,membrane; GO:0071944,cell periphery","--","--","--","--"]
["MS12G15200",1.5803,1.3724,1.228,1.1929,0.5668,0.6739,1.0252,0.9635,0.9659,0.3487,0.7991,0.4894,1.052,0.7234,0.361,67,58,51,37,21,24,33,29,37,12,29,21,35,24,12,-1.177258017,0.002621078,0.006694509,"down",-0.672447049,0.113317715,0.16373473,false,-0.579188924,0.143864655,0.201229778,false,-0.221225259,0.488201903,0.568165185,false,0.968651007,0.024153547,0.06375854,false,0.467717906,0.308551701,0.504467777,false,0.35846259,0.390447158,0.80129276,false,0.617353385,0.232481368,0.411977735,false,0.121471669,0.81911295,0.931939893,false,"chr_0012",22908407,22915633,"+","MS12G15200","--","K08150 MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13 | (RefSeq) inositol transporter 1 (A)","--","probable plastidic glucose transporter 3 isoform X1 [Pyrus x bretschneideri]","PLST3_ARATH RecName: Full=Probable plastidic glucose transporter 3;","A0A540NMK1_MALBA RecName: Full=MFS domain-containing protein {ECO:0000259|PROSITE:PS50850};","Predicted transporter (major facilitator superfamily)","GO:0031969,chloroplast membrane; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0005802,trans-Golgi network; GO:0015149,hexose transmembrane transporter activity; GO:0015749,monosaccharide transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015144,carbohydrate transmembrane transporter activity; GO:0015145,monosaccharide transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0051119,sugar transmembrane transporter activity; GO:0006810,transport; GO:0008150,biological_process; GO:0008643,carbohydrate transport; GO:0009987,cellular process; GO:0034219,carbohydrate transmembrane transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0071702,organic substance transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009536,plastid; GO:0009941,chloroplast envelope; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0097708,intracellular vesicle; GO:0031224,intrinsic component of membrane; GO:0031984,organelle subcompartment; GO:0098791,Golgi apparatus subcompartment","PF00083.27:Sugar (and other) transporter","--","--","--"]
["MS12G16130",7.5698,7.9984,9.1251,3.8529,1.6587,3.7389,2.0154,2.2687,2.1393,1.7858,3.4811,3.0236,2.1551,3.3961,3.3896,94,99,111,35,18,39,19,20,24,18,37,38,21,33,33,-1.387243782,"6.06059E-06","2.74267E-05","down",-1.174145876,"7.97011E-05",0.000230346,"down",-1.217469163,0.000595,0.0014607,"down",-1.661157294,"9.2941E-08","4.02064E-07","down",-0.256654975,0.546457387,0.684119371,false,-0.469821611,0.250362912,0.441601941,false,-0.441606163,0.330667444,0.766763198,false,0.19092504,0.683999396,0.817702212,false,-0.01867861,0.966415309,0.989687548,false,"chr_0012",24865845,24867504,"+","MS12G16130","--","K02295 cryptochrome | (RefSeq) (6-4)DNA photolyase (A)","--","(6-4)DNA photolyase [Malus domestica]","UVR3_ARATH RecName: Full=(6-4)DNA photolyase; EC=4.1.99.13; AltName: Full=Protein UV repair defective 3;","A0A498HC21_MALDO RecName: Full=Photolyase/cryptochrome alpha/beta domain-containing protein {ECO:0000259|PROSITE:PS51645};","Deoxyribodipyrimidine photolyase/cryptochrome","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0003904,deoxyribodipyrimidine photo-lyase activity; GO:0003914,DNA (6-4) photolyase activity; GO:0003677,DNA binding; GO:0071949,FAD binding; GO:0032922,circadian regulation of gene expression; GO:0043153,entrainment of circadian clock by photoperiod; GO:0006290,pyrimidine dimer repair; GO:0009411,response to UV; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0003913,DNA photolyase activity; GO:0016829,lyase activity; GO:0016830,carbon-carbon lyase activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0000166,nucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0050660,flavin adenine dinucleotide binding; GO:1901265,nucleoside phosphate binding; GO:0007623,circadian rhythm; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0019222,regulation of metabolic process; GO:0032501,multicellular organismal process; GO:0043170,macromolecule metabolic process; GO:0048511,rhythmic process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009605,response to external stimulus; GO:0009628,response to abiotic stimulus; GO:0009648,photoperiodism; GO:0009649,entrainment of circadian clock; GO:0042752,regulation of circadian rhythm; GO:0050896,response to stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006281,DNA repair; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0034641,cellular nitrogen compound metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0051716,cellular response to stimulus; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF03441.17:FAD binding domain of DNA photolyase","--","--","--"]
["MS12G16880",25.3177,22.6453,10.5525,1.9319,16.819,2.74,4.7868,7.1098,9.6539,24.4254,2.8776,4.5483,5.8147,5.5214,7.6224,627,559,256,35,364,57,90,125,216,491,61,114,113,107,148,-0.653072101,0.507535933,0.60477326,false,-1.343449807,"4.48676E-05",0.000135065,"down",-1.198367324,0.234181876,0.305854158,false,-1.175337892,0.001351166,0.003069254,"down",-0.502236374,0.59831092,0.725874262,false,0.188585949,0.518968289,0.697663807,false,0.011000783,0.991102148,0.997554889,false,-0.51534119,0.686157051,0.819123605,false,0.179727038,0.851983195,0.94525358,false,"chr_0012",25965664,25991443,"+","MS12G16880","--","--","--","umecyanin-like [Malus sylvestris]","CPC_CUCSA RecName: Full=Cucumber peeling cupredoxin; Short=CPC; AltName: Full=Stellacyanin;","A0A498HGE0_MALDO RecName: Full=Phytocyanin domain-containing protein {ECO:0000259|PROSITE:PS51485};","--","GO:0009055,electron transfer activity; GO:0046872,metal ion binding; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding","PF02298.20:Plastocyanin-like domain","--","--","--"]
["MS12G18110",1.0387,0.8048,0.5039,0.1546,0.0824,0.1102,0.0677,0.0579,0.1821,0.19,0.4325,0.1118,0.0917,0.184,0.0656,101,78,48,11,7,9,5,4,16,15,36,11,7,14,5,-1.516340523,0.003572132,0.008823879,"down",-2.497921881,"8.34535E-07","3.29795E-06","down",-2.564482165,"2.04201E-07","8.91969E-07","down",-2.635156739,"1.04935E-06","3.94716E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0012",27792485,27799418,"+","MS12G18110","--","--","--","uncharacterized protein LOC103426116 [Malus domestica]","--","A0A540LG40_MALBA RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};","--","--","PF13445.9:RING-type zinc-finger","--","--","--"]
["MS12G19200",3.0428,2.32,2.0708,1.0537,0.325,0.3381,0.4275,0.6286,0.6736,0.8497,1.4693,0.7616,0.5687,0.6222,0.621,75,57,50,19,7,7,8,11,15,17,31,19,11,12,12,-1.099567115,0.005064131,0.012045246,"down",-1.748087781,"2.14859E-05","6.82825E-05","down",-1.924219772,0.000306716,0.000794282,"down",-1.823073117,"2.2676E-05","6.985E-05","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-0.806814416,0.21654849,0.393390183,false,"NA","NA","NA","NA","chr_0012",29349322,29350375,"-","MS12G19200","--","--","--","uncharacterized protein LOC103928832 [Pyrus x bretschneideri]","--","A0A5N5FSQ2_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2604400.1};","--","--","--","--","--","--"]
["MS12G20700",3.6847,7.977,8.7107,0.7953,0.3329,2.0778,1.1495,1.0927,0.7513,3.4643,5.211,4.6946,1.1121,1.9826,1.9788,38,82,88,6,3,18,9,8,7,29,46,49,9,16,16,-0.419831531,0.28486291,0.379946112,false,-1.710697893,0.00023523,0.000623921,"down",-2.471035163,"7.39633E-05",0.000214557,"down",-2.487169447,"1.66046E-06","6.07011E-06","down",-2.059005352,"2.127E-05",0.000146386,"down","NA","NA","NA","NA","NA","NA","NA","NA",-2.035062583,0.00079644,0.005193774,"down","NA","NA","NA","NA","chr_0012",32447517,32448154,"+","MS12G20700","--","--","--","leucine-rich repeat extensin-like protein 1 [Malus sylvestris]","--","A0A498HHJ0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH68591.1};","--","--","--","--","--","--"]
["MS12G21600",31.9438,31.537,32.6096,240.2515,174.0293,221.961,213.731,123.1567,162.2783,136.7205,189.7207,200.1906,231.7597,257.4565,231.4765,251,247,251,1381,1195,1465,1275,687,1152,872,1276,1592,1429,1583,1426,2.635872895,"5.59356E-53","8.93488E-51","up",3.199165848,"3.5157E-137","3.5808E-134","up",2.938257083,"9.63047E-67","1.82709E-64","up",2.661561019,"1.14763E-31","3.17896E-30","up",0.037539879,0.877487761,0.926200852,false,-0.523529576,0.015797332,0.060322832,false,-0.279607432,0.24250454,0.698279409,false,0.319029334,0.102348365,0.234486155,false,-0.236566349,0.135960854,0.386844187,false,"chr_0012",33448343,33448678,"+","MS12G21600","--","--","--","F-box/LRR-repeat MAX2 homolog A-like [Malus sylvestris]","MAX2A_PETHY RecName: Full=F-box/LRR-repeat MAX2 homolog A; AltName: Full=F-box and leucine-rich repeat MAX2 homolog A;","A0A498HE02_MALDO RecName: Full=F-box domain-containing protein {ECO:0000259|PROSITE:PS50181};","--","--","--","--","--","--"]
["MS12G22610",5.6081,5.9076,5.224,2.3956,1.6845,2.6705,2.0314,1.9749,1.9398,2.5909,5.9786,2.632,1.7867,3.4042,2.2353,80,84,73,25,21,32,22,20,25,30,73,38,20,38,25,-0.409385792,0.273036083,0.367049827,false,-0.884016163,0.00785509,0.015300435,false,-1.105716329,0.000587981,0.001445374,"down",-1.213899767,0.000157587,0.000420997,"down",-0.79300284,0.082993484,0.171069799,false,-0.313301893,0.461015824,0.648850111,false,-0.107773505,0.790525113,0.950207719,false,-0.6840062,0.141613044,0.294160919,false,-0.196993414,0.643849699,0.845182561,false,"chr_0012",34757318,34760264,"+","MS12G22610","--","--","--","nitrogen regulatory protein P-II homolog isoform X2 [Malus sylvestris]","GLNB_ARATH RecName: Full=Nitrogen regulatory protein P-II homolog; AltName: Full=Protein PII-like; Flags: Precursor;","A0A5N5G8F0_9ROSA SubName: Full=Nitrogen regulatory protein P-II-like protein {ECO:0000313|EMBL:KAB2611715.1};","--","GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0005829,cytosol; GO:0009536,plastid; GO:0010307,acetylglutamate kinase regulator activity; GO:0005524,ATP binding; GO:0030234,enzyme regulator activity; GO:0000287,magnesium ion binding; GO:0009718,anthocyanin-containing compound biosynthetic process; GO:0006807,nitrogen compound metabolic process; GO:2000013,regulation of arginine biosynthetic process via ornithine; GO:0042304,regulation of fatty acid biosynthetic process; GO:0006808,regulation of nitrogen utilization; GO:0009416,response to light stimulus; GO:0009744,response to sucrose; GO:0003674,molecular_function; GO:0019207,kinase regulator activity; GO:0098772,molecular function regulator activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0009813,flavonoid biosynthetic process; GO:0042440,pigment metabolic process; GO:0046148,pigment biosynthetic process; GO:0046283,anthocyanin-containing compound metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0000820,regulation of glutamine family amino acid metabolic process; GO:0000821,regulation of arginine metabolic process; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006521,regulation of cellular amino acid metabolic process; GO:0006525,arginine metabolic process; GO:0006526,arginine biosynthetic process; GO:0006591,ornithine metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009064,glutamine family amino acid metabolic process; GO:0009084,glutamine family amino acid biosynthetic process; GO:0009308,amine metabolic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010565,regulation of cellular ketone metabolic process; GO:0016053,organic acid biosynthetic process; GO:0019222,regulation of metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0033238,regulation of cellular amine metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042180,cellular ketone metabolic process; GO:0042450,arginine biosynthetic process via ornithine; GO:0043436,oxoacid metabolic process; GO:0044106,cellular amine metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0062012,regulation of small molecule metabolic process; GO:0065007,biological regulation; GO:0080090,regulation of primary metabolic process; GO:0090368,regulation of ornithine metabolic process; GO:1900079,regulation of arginine biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901605,alpha-amino acid metabolic process; GO:1901607,alpha-amino acid biosynthetic process; GO:2000282,regulation of cellular amino acid biosynthetic process; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0006633,fatty acid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0019216,regulation of lipid metabolic process; GO:0019217,regulation of fatty acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0044255,cellular lipid metabolic process; GO:0046890,regulation of lipid biosynthetic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:0009605,response to external stimulus; GO:0009991,response to extracellular stimulus; GO:0019740,nitrogen utilization; GO:0031667,response to nutrient levels; GO:0032101,regulation of response to external stimulus; GO:0032104,regulation of response to extracellular stimulus; GO:0032107,regulation of response to nutrient levels; GO:0048583,regulation of response to stimulus; GO:0050896,response to stimulus; GO:0009314,response to radiation; GO:0009628,response to abiotic stimulus; GO:0009743,response to carbohydrate; GO:0010033,response to organic substance; GO:0034285,response to disaccharide; GO:0042221,response to chemical; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009579,thylakoid; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment","PF00543.25:Nitrogen regulatory protein P-II","--","--","--"]
["MS13G00670",3.5511,3.2163,3.5244,6.2701,5.4745,7.6918,6.0417,3.2653,5.7867,4.5572,4.1487,3.5088,5.4682,4.4121,3.2083,72,65,70,93,97,131,93,47,106,75,72,72,87,70,51,0.432088618,0.095372746,0.153423966,false,0.642935216,0.027431763,0.046808317,false,1.126619803,"3.44202E-06","1.25243E-05","up",0.835482397,0.005894865,0.011784976,false,0.413854878,0.193727844,0.326221657,false,0.207331826,0.542409993,0.716306361,false,-0.292441059,0.327769219,0.765145823,false,0.710682103,0.006269382,0.027593448,false,0.508910802,0.078323606,0.280382846,false,"chr_0013",4777089,4779131,"+","MS13G00670","--","K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] | (RefSeq) DExH-box ATP-dependent RNA helicase DExH9 (A)","ko03018: RNA degradation","DExH-box ATP-dependent RNA helicase DExH9 [Malus sylvestris]","MTR4_ARATH RecName: Full=DExH-box ATP-dependent RNA helicase DExH9 {ECO:0000305}; EC=3.6.4.13 {ECO:0000305}; AltName: Full=Protein MTR4 homolog {ECO:0000305}; Short=AtMTR4 {ECO:0000303|PubMed:21682783};","A0A5N5H971_9ROSA SubName: Full=Superkiller viralicidic activity 2-like 2 {ECO:0000313|EMBL:KAB2623457.1};","Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily","GO:0005730,nucleolus; GO:0005654,nucleoplasm; GO:0005634,nucleus; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0003724,RNA helicase activity; GO:0019843,rRNA binding; GO:0000460,maturation of 5.8S rRNA; GO:0006401,RNA catabolic process; GO:0031125,rRNA 3'-end processing; GO:0006364,rRNA processing; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0004386,helicase activity; GO:0008186,ATP-dependent activity, acting on RNA; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016072,rRNA metabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0034470,ncRNA processing; GO:0034641,cellular nitrogen compound metabolic process; GO:0034660,ncRNA metabolic process; GO:0042254,ribosome biogenesis; GO:0043170,macromolecule metabolic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0019439,aromatic compound catabolic process; GO:0034655,nucleobase-containing compound catabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0044270,cellular nitrogen compound catabolic process; GO:0046700,heterocycle catabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901575,organic substance catabolic process; GO:0031123,RNA 3'-end processing; GO:0043628,small regulatory ncRNA 3'-end processing; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity","PF00270.32:DEAD/DEAH box helicase","--","--","--"]
["MS13G00680",7.6847,10.8184,11.5142,18.1291,17.0199,24.0518,18.9381,11.3484,16.6002,11.4525,12.3084,11.7569,14.2157,19.3243,13.5958,62,87,91,107,120,163,116,65,121,75,85,96,90,122,86,0.431092716,0.089499534,0.145254872,false,0.945330515,0.000412521,0.001045441,false,1.191366276,"4.84664E-06","1.71798E-05","up",0.929513753,0.001516319,0.003417203,false,0.510903591,0.05743255,0.127995373,false,-0.000861592,0.997571426,0.998726315,false,-0.264035736,0.329245673,0.766191398,false,0.777517143,0.000837878,0.005421664,false,0.271466761,0.27942275,0.570663115,false,"chr_0013",4779516,4780409,"+","MS13G00680","--","K12598 ATP-dependent RNA helicase DOB1 [EC:3.6.4.13] | (RefSeq) DExH-box ATP-dependent RNA helicase DExH9 (A)","ko03018: RNA degradation","zinc finger CCCH domain-containing protein 5-like [Pyrus ussuriensis x Pyrus communis]","MTR4_ARATH RecName: Full=DExH-box ATP-dependent RNA helicase DExH9 {ECO:0000305}; EC=3.6.4.13 {ECO:0000305}; AltName: Full=Protein MTR4 homolog {ECO:0000305}; Short=AtMTR4 {ECO:0000303|PubMed:21682783};","A0A5N5FBR2_9ROSA SubName: Full=Zinc finger CCCH domain-containing protein 5-like {ECO:0000313|EMBL:KAB2600529.1};","Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily","GO:0005730,nucleolus; GO:0005654,nucleoplasm; GO:0005634,nucleus; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0003724,RNA helicase activity; GO:0019843,rRNA binding; GO:0000460,maturation of 5.8S rRNA; GO:0006401,RNA catabolic process; GO:0031125,rRNA 3'-end processing; GO:0006364,rRNA processing; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0004386,helicase activity; GO:0008186,ATP-dependent activity, acting on RNA; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016072,rRNA metabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0034470,ncRNA processing; GO:0034641,cellular nitrogen compound metabolic process; GO:0034660,ncRNA metabolic process; GO:0042254,ribosome biogenesis; GO:0043170,macromolecule metabolic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0019439,aromatic compound catabolic process; GO:0034655,nucleobase-containing compound catabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0044270,cellular nitrogen compound catabolic process; GO:0046700,heterocycle catabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901575,organic substance catabolic process; GO:0031123,RNA 3'-end processing; GO:0043628,small regulatory ncRNA 3'-end processing; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity","PF08148.15:DSHCT (NUC185) domain","--","--","--"]
["MS13G02930",86.6446,110.196,94.7361,10.093,7.195,10.3429,7.6291,8.0116,8.9233,8.1642,8.4736,9.5639,8.4118,10.6692,9.0514,3321,4210,3557,283,241,333,222,218,309,254,278,371,253,320,272,-3.288767029,"3.3856E-100","3.33492E-97","down",-3.082464825,"7.16256E-83","1.53305E-80","down",-3.191898039,"2.12971E-64","3.62489E-62","down",-3.287601531,"1.76074E-94","4.67696E-92","down",0.015069377,0.926230103,0.955910926,false,-0.189230929,0.28087345,0.475327312,false,-0.09569683,0.622742824,0.89987916,false,0.114305789,0.555428645,0.725952067,false,-0.084960906,0.671154197,0.861372044,false,"chr_0013",13764405,13767274,"-","MS13G02930","--","K14498 serine/threonine-protein kinase SRK2 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase SAPK2-like (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction","serine/threonine-protein kinase SAPK2-like [Malus domestica]","SAPK2_ORYSI RecName: Full=Serine/threonine-protein kinase SAPK2; EC=2.7.11.1; AltName: Full=Osmotic stress/abscisic acid-activated protein kinase 2;","A0A076V7H8_9ROSA SubName: Full=Sucrose non-fermenting-1-related protein kinase 2.12 {ECO:0000313|EMBL:AIK22407.1};","Serine/threonine protein kinase","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0009738,abscisic acid-activated signaling pathway; GO:0006468,protein phosphorylation; GO:0009845,seed germination; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0090351,seedling development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00069.28:Protein kinase domain","--","--","--"]
["MS13G03460",0.5804,0.4684,0.4637,0.8969,1.2561,0.7661,0.8476,0.6398,0.8659,1.057,0.6928,0.8478,1.0452,0.7579,0.7242,46,37,36,52,87,51,51,36,62,68,47,68,65,47,45,0.970599226,0.003156561,0.007886331,false,1.034523729,0.001422854,0.003245315,"up",1.173225687,0.000832158,0.001983091,"up",0.919886844,0.004028375,0.008336985,false,-0.036424564,0.910001248,0.945517226,false,-0.098501809,0.756637259,0.863867599,false,-0.258290088,0.452373945,0.831639103,false,0.222065576,0.535935836,0.710750318,false,0.166318134,0.63447978,0.839872814,false,"chr_0013",15425004,15428863,"+","MS13G03460","--","--","--","protein NETWORKED 2D-like [Malus domestica]","NET2D_ARATH RecName: Full=Protein NETWORKED 2D {ECO:0000303|PubMed:22840520};","A0A540LXZ5_MALBA RecName: Full=NAB domain-containing protein {ECO:0000259|PROSITE:PS51774};","--","GO:0110165,cellular anatomical entity; GO:0003779,actin binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0005575,cellular_component","PF07765.15:KIP1-like protein","--","--","--"]
["MS13G04470",3.2482,2.5878,1.6579,0.2612,0.3061,0.7051,0.1762,0.1615,0.4441,0.9416,0.8259,0.5664,0.1461,0.2686,0.463,170,135,85,10,14,31,7,6,21,40,37,30,6,11,19,-1.505364012,"4.07708E-05",0.000156939,"down",-2.812983835,"3.66217E-10","2.23954E-09","down",-2.358076206,"2.12929E-07","9.27646E-07","down",-2.968278349,"2.75485E-10","1.63358E-09","down",-1.457083941,0.007464254,0.02420982,"down","NA","NA","NA","NA","NA","NA","NA","NA",-0.842393028,0.100753351,0.231994724,false,0.474462699,0.461546461,0.730493231,false,"chr_0013",17302884,17307143,"+","MS13G04470","--","K18726 FAS-associated factor 2 | (RefSeq) plant UBX domain-containing protein 10-like (A)","--","plant UBX domain-containing protein 9-like isoform X2 [Malus domestica]","PUX9_ARATH RecName: Full=Plant UBX domain-containing protein 9 {ECO:0000303|Ref.5}; Short=PUX9 {ECO:0000303|Ref.5};","A0A540MD16_MALBA RecName: Full=UBX domain-containing protein {ECO:0000259|PROSITE:PS50033};","Predicted regulator of the ubiquitin pathway (contains UAS and UBX domains)","GO:0005783,endoplasmic reticulum; GO:0043130,ubiquitin binding; GO:0030433,ubiquitin-dependent ERAD pathway; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0032182,ubiquitin-like protein binding; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0006950,response to stress; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010243,response to organonitrogen compound; GO:0010498,proteasomal protein catabolic process; GO:0019538,protein metabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0033554,cellular response to stress; GO:0034976,response to endoplasmic reticulum stress; GO:0036503,ERAD pathway; GO:0042221,response to chemical; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0050896,response to stimulus; GO:0051603,proteolysis involved in protein catabolic process; GO:0051716,cellular response to stimulus; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901698,response to nitrogen compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00789.23:UBX domain","--","--","--"]
["MS13G05790",41.9193,37.8318,37.9345,11.6107,11.2695,14.0343,13.8882,10.6234,12.8053,19.7555,21.5571,21.2342,16.9826,21.1474,18.2116,1145,1030,1015,232,269,322,288,206,316,438,504,587,364,452,390,-0.726687606,"8.29071E-09","5.93648E-08",false,-0.7723853,"1.25945E-07","5.57309E-07",false,-1.461898437,"8.55096E-22","1.68452E-20","down",-1.374684895,"1.1399E-16","1.2255E-15","down",-0.635135599,0.000106784,0.000609344,false,-0.58744725,0.001242331,0.007915964,false,0.085240119,0.646719516,0.907348632,false,-0.717991309,"2.08409E-06","3.14854E-05",false,-0.664607414,0.000100264,0.002191743,false,"chr_0013",19519050,19521651,"-","MS13G05790","--","K02931 large subunit ribosomal protein L5 | (RefSeq) LOW QUALITY PROTEIN: 50S ribosomal protein L5, chloroplastic (A)","ko03010: Ribosome","50S ribosomal protein L5, chloroplastic [Pyrus x bretschneideri]","RK5_ARATH RecName: Full=50S ribosomal protein L5, chloroplastic; Flags: Precursor;","A0A498KRZ5_MALDO RecName: Full=50S ribosomal protein L5, chloroplastic {ECO:0000256|ARBA:ARBA00014091};","Mitochondrial/chloroplast ribosomal protein L5/L7","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0005829,cytosol; GO:0022626,cytosolic ribosome; GO:0003729,mRNA binding; GO:0003723,RNA binding; GO:0019843,rRNA binding; GO:0003735,structural constituent of ribosome; GO:0006412,translation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0005840,ribosome; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle","PF00673.24:ribosomal L5P family C-terminus","--","--","--"]
["MS13G06810",1.7344,1.28,1.2211,0,0.0228,0.0237,0,0,0,0.2702,0.1863,0.0591,0.0762,0,0,87,64,60,0,1,1,0,0,0,11,8,3,3,0,0,-2.885249864,"1.79735E-08","1.23091E-07","down",-5.502394742,"2.12605E-09","1.18642E-08","down",-6.22929903,"1.19954E-08","6.24861E-08","down",-7.96233389,"1.48742E-10","9.07423E-10","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0013",21004228,21009741,"-","MS13G06810","--","--","--","hypothetical protein DVH24_005481 [Malus domestica]","B561I_ARATH RecName: Full=Cytochrome b561 and DOMON domain-containing protein At3g61750; AltName: Full=Protein b561A.tha9; Flags: Precursor;","A0A498KJ25_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI07708.1};","Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains","GO:0016021,integral component of membrane; GO:0046872,metal ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF07279.14:Protein of unknown function (DUF1442)","--","--","--"]
["MS13G07700",3.1259,1.9486,1.8589,12.4458,8.9078,14.0004,9.9137,6.1987,9.7249,5.0475,9.2009,7.5267,8.2185,12.8956,7.4515,206,128,120,600,513,775,496,290,579,270,519,502,425,665,385,1.823719564,"2.21539E-10","1.97606E-09","up",2.328802372,"4.30172E-16","4.72517E-15","up",2.552732603,"8.20057E-21","1.47323E-19","up",2.173371159,"1.40946E-14","1.27723E-13","up",0.361390829,0.177967196,0.306501079,false,-0.140726441,0.60377708,0.761754497,false,-0.379405705,0.118168466,0.559679799,false,0.743190861,0.003367655,0.016780345,false,0.247246482,0.34122124,0.630699542,false,"chr_0013",22378068,22382359,"+","MS13G07700","--","K12130 pseudo-response regulator 5 | (RefSeq) two-component response regulator-like APRR3 (A)","ko04712: Circadian rhythm - plant","hypothetical protein DVH24_005391 [Malus domestica]","APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName: Full=Pseudo-response regulator 5;","A0A498KIU4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI07618.1};","GATA-4/5/6 transcription factors","GO:0005634,nucleus; GO:0009736,cytokinin-activated signaling pathway; GO:0000160,phosphorelay signal transduction system; GO:0048511,rhythmic process; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009735,response to cytokinin; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071368,cellular response to cytokinin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0035556,intracellular signal transduction; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00072.27:Response regulator receiver domain","Pseudo ARR-B","TR","Pseudo ARR-B"]
["MS13G08820",2.8741,4.4307,4.1327,15.2363,9.0444,11.4332,9.649,6.2209,7.4682,5.3329,6.429,7.2728,8.1294,8.7121,8.4271,164,252,231,636,451,548,418,252,385,247,314,420,364,389,377,0.921309827,"2.66805E-05",0.000106574,false,1.437722993,"1.49248E-13","1.30308E-12","up",1.856260079,"1.65044E-12","1.37588E-11","up",1.315584377,"1.50978E-07","6.35125E-07","up",0.40625118,0.071362063,0.152219776,false,-0.107707667,0.598138638,0.757148285,false,-0.542474624,0.037263799,0.360941596,false,0.951554495,"5.83827E-05",0.000576455,false,0.442241888,0.042018264,0.189783499,false,"chr_0013",24191679,24194514,"+","MS13G08820","--","K14486 auxin response factor | (RefSeq) LOW QUALITY PROTEIN: auxin response factor 19-like (A)","ko04075: Plant hormone signal transduction","auxin response factor 18-like isoform X1 [Malus domestica]","ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10;","A0A498KRQ9_MALDO RecName: Full=Auxin response factor {ECO:0000256|RuleBase:RU004561};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0009734,auxin-activated signaling pathway; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009733,response to auxin; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF06507.16:Auxin response factor","B3-ARF","TF","B3->B3-ARF"]
["MS13G10210",38.4305,41.3562,34.6505,4.0657,2.5377,3.8514,3.196,2.2418,2.8878,5.4963,9.1747,7.5532,3.7238,3.8676,3.7936,1473,1580,1301,114,85,124,93,61,100,171,301,293,112,116,114,-2.186190212,"2.32386E-29","1.12948E-27","down",-3.038687799,"3.26677E-78","6.06859E-76","down",-3.248583161,"1.51226E-53","1.63797E-51","down",-3.498526917,"9.76381E-72","1.39651E-69","down",-1.300418822,"5.39261E-07","5.31699E-06","down",-0.444469725,0.058486198,0.160803633,false,-0.252061278,0.363477426,0.787817246,false,-1.045697501,0.000114941,0.001024437,"down",-0.18534235,0.447095121,0.720257231,false,"chr_0013",25883019,25886111,"-","MS13G10210","--","--","--","ACT domain-containing protein ACR9-like [Malus sylvestris]","ACR9_ARATH RecName: Full=ACT domain-containing protein ACR9 {ECO:0000305}; AltName: Full=Protein ACT DOMAIN REPEATS 9 {ECO:0000303|PubMed:21861936};","A0A540M3D8_MALBA RecName: Full=ACT domain-containing protein {ECO:0000259|PROSITE:PS51671};","--","--","PF01842.28:ACT domain","--","--","--"]
["MS13G10630",5.2472,4.1553,6.0708,30.0111,21.6159,23.6711,27.9779,19.6115,24.2851,16.5663,16.3148,19.1486,20.5599,21.2077,17.6689,375,296,425,1569,1350,1421,1518,995,1568,961,998,1385,1153,1186,990,1.939412145,"1.32466E-27","5.49017E-26","up",2.237315275,"1.59062E-36","6.83872E-35","up",2.499844938,"1.50362E-32","6.0441E-31","up",2.501990046,"3.46592E-34","1.10634E-32","up",0.574801744,0.001435986,0.005932319,false,0.27881712,0.126736939,0.278791043,false,-0.00035296,0.998640238,0.999353708,false,0.577681263,0.001710061,0.009726413,false,0.28701743,0.117536383,0.355275186,false,"chr_0013",26383804,26387627,"+","MS13G10630","--","--","--","uncharacterized protein LOC103432283 [Malus domestica]","--","A0A540N9N5_MALBA RecName: Full=BED-type domain-containing protein {ECO:0000259|PROSITE:PS50808};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0046872,metal ion binding; GO:0046983,protein dimerization activity; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0005515,protein binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF04937.18:Protein of unknown function (DUF 659)","--","--","--"]
["MS13G11820",37.2255,41.7819,51.4606,144.2624,118.2115,212.0585,100.2039,51.692,71.4731,178.3355,220.3537,229.5215,186.5145,264.633,208.9342,1903,2129,2577,5395,5281,9106,3889,1876,3301,7400,9642,11875,7482,10586,8374,2.453570795,"4.77446E-54","8.01647E-52","up",2.63249605,"3.2247E-50","2.42362E-48","up",2.068239205,"1.1759E-19","1.91814E-18","up",1.063995291,"2.76901E-05","8.40763E-05","up",-1.378744234,"3.56899E-08","4.42517E-07","down",-1.555345058,"1.08401E-09","3.85079E-08","down",-1.007512615,0.000468513,0.038914805,"down",-0.369397492,0.087929621,0.210336071,false,-0.540086209,0.018743358,0.111295712,false,"chr_0013",27909790,27913681,"+","MS13G11820","--","K05857 phosphatidylinositol phospholipase C, delta [EC:3.1.4.11] | (RefSeq) phosphoinositide phospholipase C 2-like (A)","ko00562: Inositol phosphate metabolism; ko01100: Metabolic pathways; ko04070: Phosphatidylinositol signaling system","hypothetical protein DVH24_022946 [Malus domestica]","PLCD2_ARATH RecName: Full=Phosphoinositide phospholipase C 2; EC=3.1.4.11; AltName: Full=Phosphoinositide phospholipase PLC2; Short=AtPLC2; Short=PI-PLC2;","A0A498KSY7_MALDO RecName: Full=Phosphoinositide phospholipase C {ECO:0000256|RuleBase:RU361133}; EC=3.1.4.11 {ECO:0000256|RuleBase:RU361133};","Phosphoinositide-specific phospholipase C","GO:0005886,plasma membrane; GO:0004435,phosphatidylinositol phospholipase C activity; GO:0004629,phospholipase C activity; GO:0042742,defense response to bacterium; GO:0009553,embryo sac development; GO:0048437,floral organ development; GO:0016042,lipid catabolic process; GO:0009556,microsporogenesis; GO:0048015,phosphatidylinositol-mediated signaling; GO:0010601,positive regulation of auxin biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004620,phospholipase activity; GO:0008081,phosphoric diester hydrolase activity; GO:0016298,lipase activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0042578,phosphoric ester hydrolase activity; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0099402,plant organ development; GO:0006629,lipid metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0007049,cell cycle; GO:0009555,pollen development; GO:0009987,cellular process; GO:0019953,sexual reproduction; GO:0022402,cell cycle process; GO:0034293,sexual sporulation; GO:0043934,sporulation; GO:0048236,plant-type sporogenesis; GO:0048869,cellular developmental process; GO:0051321,meiotic cell cycle; GO:1903046,meiotic cell cycle process; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0023052,signaling; GO:0035556,intracellular signal transduction; GO:0048017,inositol lipid-mediated signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0009058,biosynthetic process; GO:0009850,auxin metabolic process; GO:0009851,auxin biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010600,regulation of auxin biosynthetic process; GO:0010817,regulation of hormone levels; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032350,regulation of hormone metabolic process; GO:0032352,positive regulation of hormone metabolic process; GO:0042445,hormone metabolic process; GO:0042446,hormone biosynthetic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0046885,regulation of hormone biosynthetic process; GO:0046886,positive regulation of hormone biosynthetic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0065008,regulation of biological quality; GO:0090354,regulation of auxin metabolic process; GO:0090355,positive regulation of auxin metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF00388.22:Phosphatidylinositol-specific phospholipase C, X domain","--","--","--"]
["MS13G12440",7.003,6.5352,8.5268,10.1345,9.67,13.0412,8.9408,8.3765,10.7394,11.9533,13.5978,14.844,11.8659,12.7242,11.1029,358,333,427,379,432,560,347,304,496,496,595,768,476,509,445,1.060140353,"3.86688E-11","3.79257E-10","up",0.988883932,"4.77943E-10","2.88809E-09",false,0.785662596,"1.6653E-05","5.39863E-05",false,0.630097897,0.00025809,0.000663801,false,-0.416724468,0.008928484,0.028055589,false,-0.342743918,0.033387316,0.107084746,false,-0.15683089,0.379142189,0.796193968,false,-0.257227181,0.123947413,0.268484998,false,-0.177832659,0.284933136,0.576901145,false,"chr_0013",28421694,28425309,"+","MS13G12440","--","K14207 solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 | (RefSeq) amino acid transporter AVT6A-like (A)","--","amino acid transporter AVT6C-like isoform X1 [Malus domestica]","AVT6C_ARATH RecName: Full=Amino acid transporter AVT6C {ECO:0000305}; Short=AtAvt6C {ECO:0000303|PubMed:27925655};","A0A498KML6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI08746.1};","Amino acid transporter protein","GO:0016021,integral component of membrane; GO:0015179,L-amino acid transmembrane transporter activity; GO:0003333,amino acid transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005342,organic acid transmembrane transporter activity; GO:0015171,amino acid transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0046943,carboxylic acid transmembrane transporter activity; GO:0006810,transport; GO:0006865,amino acid transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015849,organic acid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:1903825,organic acid transmembrane transport; GO:1905039,carboxylic acid transmembrane transport; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF01490.21:Transmembrane amino acid transporter protein","--","--","--"]
["MS13G12560",27.9517,21.3833,15.0503,4.8331,5.878,4.8048,3.2072,17.3372,8.8977,11.9992,2.455,4.9106,14.2397,4.1347,11.9974,838,639,442,106,154,121,73,369,241,292,63,149,335,97,282,-1.520453169,0.034826559,0.064754851,false,-0.791448909,0.048415596,0.077329125,false,-1.838486658,"1.1086E-10","7.52011E-10","down",-0.846472378,0.224678098,0.296205505,false,0.692804615,0.442712886,0.593249469,false,-0.037584413,0.962968323,0.981089633,false,0.992355851,0.050441703,0.403821876,false,-0.294009941,0.570806817,0.737427439,false,-1.020120028,0.014591644,0.09332053,false,"chr_0013",28522198,28524147,"+","MS13G12560","--","K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase P7-like (A)","ko00940: Phenylpropanoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","peroxidase P7-like [Malus domestica]","PER52_ARATH RecName: Full=Peroxidase 52; Short=Atperox P52; EC=1.11.1.7; AltName: Full=ATP49; Flags: Precursor;","A0A498KLW3_MALDO RecName: Full=Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}; EC=1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060};","--","GO:0048046,apoplast; GO:0005794,Golgi apparatus; GO:0009505,plant-type cell wall; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0004601,peroxidase activity; GO:0042744,hydrogen peroxide catabolic process; GO:0009809,lignin biosynthetic process; GO:1901430,positive regulation of syringal lignin biosynthetic process; GO:0006979,response to oxidative stress; GO:0010089,xylem development; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016209,antioxidant activity; GO:0016491,oxidoreductase activity; GO:0016684,oxidoreductase activity, acting on peroxide as acceptor; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009987,cellular process; GO:0042743,hydrogen peroxide metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0072593,reactive oxygen species metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0009058,biosynthetic process; GO:0009698,phenylpropanoid metabolic process; GO:0009699,phenylpropanoid biosynthetic process; GO:0009808,lignin metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0019748,secondary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044550,secondary metabolite biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0043455,regulation of secondary metabolic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:1900376,regulation of secondary metabolite biosynthetic process; GO:1900378,positive regulation of secondary metabolite biosynthetic process; GO:1901064,syringal lignin metabolic process; GO:1901066,syringal lignin biosynthetic process; GO:1901141,regulation of lignin biosynthetic process; GO:1901428,regulation of syringal lignin biosynthetic process; GO:2000762,regulation of phenylpropanoid metabolic process; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0009888,tissue development; GO:0010087,phloem or xylem histogenesis; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005618,cell wall; GO:0030312,external encapsulating structure; GO:0071944,cell periphery","PF00141.26:Peroxidase","--","--","--"]
["MS13G13140",182.5136,192.4236,185.5119,94.7571,73.4778,73.0166,95.8922,111.7695,118.2508,86.9441,91.1283,81.1995,71.4747,45.0937,63.3652,3931,4131,3914,1493,1383,1321,1568,1709,2301,1520,1680,1770,1208,760,1070,-0.92557558,"6.5023E-17","1.17956E-15",false,-1.343750608,"2.2134E-12","1.70698E-11","down",-1.000158588,"1.51566E-09","8.91852E-09","down",-0.500872299,"8.57405E-05",0.000240051,false,0.437733341,0.001588079,0.006480531,false,0.859496737,"3.58837E-05",0.000409489,false,0.498711749,0.006015267,0.156783551,false,-0.058115283,0.738459188,0.85278613,false,0.369228112,0.108457787,0.339840939,false,"chr_0013",29026614,29028465,"-","MS13G13140","--","K02866 large subunit ribosomal protein L10e | (RefSeq) 60S ribosomal protein L10-like (A)","ko03010: Ribosome","hypothetical protein DVH24_022820 [Malus domestica]","RL10_VITRI RecName: Full=60S ribosomal protein L10; AltName: Full=QM protein homolog;","A0A498KMF5_MALDO RecName: Full=Ribosomal_L16 domain-containing protein {ECO:0000259|Pfam:PF00252};","60s ribosomal protein L10","GO:0005840,ribosome; GO:0003735,structural constituent of ribosome; GO:0006412,translation; GO:0003674,molecular_function; GO:0005198,structural molecule activity; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00252.21:Ribosomal protein L16p/L10e","--","--","--"]
["MS13G14210",0.1276,0.1173,0.0868,0.3197,0.3163,0.3291,0.2941,0.1498,0.306,0.0393,0.236,0.1366,0.2439,0.1359,0.0271,12,11,8,22,26,26,21,10,26,3,19,13,18,10,2,"NA","NA","NA","NA","NA","NA","NA","NA",1.752278017,0.000277985,0.000725684,"up",1.457748336,0.008429991,0.016320181,"up",0.985492361,0.144317552,0.261363364,false,0.876790105,0.224292113,0.410967069,false,-0.293291844,0.516020461,0.862149665,false,1.284461903,0.035292107,0.106167889,false,1.185891783,0.072631442,0.268033326,false,"chr_0013",30022198,30029002,"-","MS13G14210","--","K08790 serine/threonine kinase 38 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase tricorner-like (A)","--","probable serine/threonine protein kinase IRE isoform X1 [Malus sylvestris]","IRE_ARATH RecName: Full=Probable serine/threonine protein kinase IRE {ECO:0000305}; EC=2.7.11.1 {ECO:0000305}; AltName: Full=Protein INCOMPLETE ROOT HAIR ELONGATION {ECO:0000303|PubMed:12000677}; Short=AtIRE {ECO:0000303|PubMed:17237187};","A0A498KK74_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","Microtubule-associated serine/threonine kinase and related proteins","GO:0005524,ATP binding; GO:0016301,kinase activity; GO:0046872,metal ion binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0035556,intracellular signal transduction; GO:0018105,peptidyl-serine phosphorylation; GO:0040008,regulation of growth; GO:0009826,unidimensional cell growth; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0043169,cation binding; GO:0004672,protein kinase activity; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0018193,peptidyl-amino acid modification; GO:0018209,peptidyl-serine modification; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0040007,growth; GO:0000902,cell morphogenesis; GO:0009653,anatomical structure morphogenesis; GO:0016049,cell growth; GO:0032502,developmental process; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0060560,developmental growth involved in morphogenesis","PF00069.28:Protein kinase domain","--","--","--"]
["MS13G14590",2.6369,2.9728,3.6632,0.4831,0.3733,0.6796,0.3581,0.2298,0.1805,0.9712,0.9528,1.343,0.485,0.799,0.5201,97,109,132,13,12,21,10,6,6,29,30,50,14,23,15,-1.308308178,"7.01192E-06","3.13478E-05","down",-2.067686199,"1.04057E-09","6.03839E-09","down",-2.383266758,"2.40622E-11","1.76227E-10","down",-3.321949207,"1.00627E-14","9.23395E-14","down",-1.991396485,0.000138362,0.000767491,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.055381029,0.017589055,0.062617283,false,-0.292503836,0.565152912,0.799352371,false,"chr_0013",30519618,30521817,"-","MS13G14590","--","K01206 alpha-L-fucosidase [EC:3.2.1.51] | (RefSeq) alpha-L-fucosidase 1-like (A)","ko00511: Other glycan degradation","alpha-L-fucosidase 1-like [Malus sylvestris]","FUCO1_ARATH RecName: Full=Alpha-L-fucosidase 1; EC=3.2.1.51 {ECO:0000269|PubMed:16516937}; AltName: Full=Alpha-1,3/4-fucosidase {ECO:0000303|PubMed:16516937}; Short=AtFUC1 {ECO:0000303|PubMed:11788770}; AltName: Full=Alpha-L-fucoside fucohydrolase; Flags: Precursor;","A0A540MF64_MALBA RecName: Full=Alpha-L-fucosidase {ECO:0000256|ARBA:ARBA00012662}; EC=3.2.1.51 {ECO:0000256|ARBA:ARBA00012662};","Alpha-L-fucosidase","GO:0048046,apoplast; GO:0005764,lysosome; GO:0000325,plant-type vacuole; GO:0099503,secretory vesicle; GO:0004560,alpha-L-fucosidase activity; GO:0006004,fucose metabolic process; GO:0006516,glycoprotein catabolic process; GO:0016139,glycoside catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0015928,fucosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0005975,carbohydrate metabolic process; GO:0005996,monosaccharide metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019318,hexose metabolic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009100,glycoprotein metabolic process; GO:0009987,cellular process; GO:0019538,protein metabolic process; GO:0030163,protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901136,carbohydrate derivative catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0016137,glycoside metabolic process; GO:1901657,glycosyl compound metabolic process; GO:1901658,glycosyl compound catabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0000323,lytic vacuole; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0097708,intracellular vesicle","PF01120.20:Alpha-L-fucosidase","--","--","--"]
["MS13G15580",7.6624,6.1444,6.6166,0.3379,0.2828,0.327,0.3979,0.4255,0.2736,0.7444,1.2193,0.7598,0.49,0.6318,0.7006,279,223,236,9,9,10,11,11,9,22,38,28,14,18,20,-2.730446276,"7.8229E-24","2.49648E-22","down",-3.196343847,"6.25662E-28","1.62249E-26","down",-4.221830954,"1.14665E-32","4.67226E-31","down",-3.956736528,"4.64965E-30","1.17028E-28","down",-1.20446021,0.017296247,0.048412458,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.475691928,0.003920622,0.018950227,"down","NA","NA","NA","NA","chr_0013",31706679,31709153,"+","MS13G15580","--","K07375 tubulin beta | (RefSeq) tubulin beta-1 chain (A)","ko04145: Phagosome; ko04814: Motor proteins","tubulin beta-1 chain [Malus domestica]","TBB1_LUPAL RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin;","A0A540LJW6_MALBA RecName: Full=Tubulin beta chain {ECO:0000256|RuleBase:RU000352};","Beta tubulin","GO:0005737,cytoplasm; GO:0005874,microtubule; GO:0005525,GTP binding; GO:0005200,structural constituent of cytoskeleton; GO:0007017,microtubule-based process; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0019001,guanyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0005856,cytoskeleton; GO:0015630,microtubule cytoskeleton; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0099080,supramolecular complex; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber","PF00091.28:Tubulin/FtsZ family, GTPase domain","--","--","--"]
["MS13G16370",3.5006,1.5743,0.6777,137.0382,64.0917,41.8178,151.4837,167.6091,109.6266,13.9046,42.8008,33.0973,170.4029,95.4482,44.2259,116,52,22,3322,1856,1164,3811,3943,3282,374,1214,1110,4431,2475,1149,4.119606581,"5.67579E-08","3.60467E-07","up",6.042421176,"1.88039E-13","1.62877E-12","up",5.612868105,"5.59285E-12","4.38276E-11","up",6.49813699,"8.37786E-23","1.36272E-21","up",2.388205277,"3.53021E-11","7.13222E-10","up",0.469579366,0.246142156,0.436970227,false,0.885654583,0.030070594,0.329685704,false,1.506386517,0.001441158,0.008443786,"up",-0.405681234,0.576835302,0.806907636,false,"chr_0013",32505225,32506641,"-","MS13G16370","--","K01183 chitinase [EC:3.2.1.14] | (RefSeq) acidic endochitinase-like (A)","ko00520: Amino sugar and nucleotide sugar metabolism; ko01100: Metabolic pathways","pathogenesis related protein 8, partial [Malus domestica]","CHIA_CICAR RecName: Full=Acidic endochitinase; EC=3.2.1.14; Flags: Precursor;","J7I628_MALDO RecName: Full=Chitinase {ECO:0000256|ARBA:ARBA00012729}; EC=3.2.1.14 {ECO:0000256|ARBA:ARBA00012729}; Flags: Fragment;","Chitinase","GO:0005615,extracellular space; GO:0004568,chitinase activity; GO:0006032,chitin catabolic process; GO:0000272,polysaccharide catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0006022,aminoglycan metabolic process; GO:0006026,aminoglycan catabolic process; GO:0006030,chitin metabolic process; GO:0006040,amino sugar metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0043170,macromolecule metabolic process; GO:0046348,amino sugar catabolic process; GO:0071704,organic substance metabolic process; GO:1901071,glucosamine-containing compound metabolic process; GO:1901072,glucosamine-containing compound catabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901136,carbohydrate derivative catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0016052,carbohydrate catabolic process; GO:0044238,primary metabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF00704.31:Glycosyl hydrolases family 18","--","--","--"]
["MS13G17430",31.2036,31.6715,35.849,134.4898,78.8467,103.6467,81.1017,75.522,121.1724,107.1625,101.6835,103.9139,92.6955,114.0608,106.5206,1196,1210,1346,3771,2641,3337,2360,2055,4196,3334,3336,4031,2788,3421,3201,1.853611215,"3.70742E-54","6.26046E-52","up",1.958178453,"1.963E-54","1.72563E-52","up",1.895998868,"8.97134E-19","1.36686E-17","up",1.768162227,"1.36139E-20","1.93232E-19","up",-0.07106214,0.717726539,0.817340446,false,-0.172878158,0.383981276,0.579922166,false,-0.12614028,0.617725011,0.897775109,false,0.058628124,0.782538184,0.880945092,false,-0.0387942,0.855234164,0.946700501,false,"chr_0013",33546303,33548189,"-","MS13G17430","--","K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein ATHB-7-like (A)","--","homeobox-leucine zipper protein ATHB-7-like [Malus sylvestris]","HOX6_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX6; AltName: Full=HD-ZIP protein HOX6; AltName: Full=Homeodomain transcription factor HOX6; AltName: Full=OsHox6;","A0A498KJ65_MALDO SubName: Full=Homeobox 7-like protein {ECO:0000313|EMBL:AZB48884.1};","Transcription factor HEX, contains HOX and HALZ domains","GO:0005634,nucleus; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0043565,sequence-specific DNA binding; GO:0003674,molecular_function; GO:0003700,DNA-binding transcription factor activity; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00046.32:Homeodomain","HB-HD-ZIP","TF","HB->HB-HD-ZIP"]
["MS13G18330",20.9633,17.0822,12.4916,2.1395,1.9538,2.1795,2.7987,4.0619,3.0343,3.576,4.0671,2.8211,2.5748,3.3821,2.9279,2210,1795,1290,165,180,193,224,304,289,306,367,301,213,279,242,-2.091461868,"7.10256E-18","1.39646E-16","down",-2.222587483,"1.32448E-22","2.37385E-21","down",-2.801896216,"4.00961E-32","1.5756E-30","down",-2.072425104,"7.40652E-16","7.44909E-15","down",0.031412149,0.896261453,0.938069375,false,0.164123617,0.460931022,0.64882005,false,0.728094121,0.001232219,0.065597796,false,-0.693916094,0.000997367,0.006237551,false,-0.554943268,0.002926159,0.029753216,false,"chr_0013",34215185,34220851,"-","MS13G18330","--","K20924 cellulose synthase-like protein [EC:2.4.1.-] | (RefSeq) LOW QUALITY PROTEIN: cellulose synthase-like protein D3 (A)","--","cellulose synthase-like protein D3 [Malus sylvestris]","CSLD3_ARATH RecName: Full=Cellulose synthase-like protein D3; Short=AtCslD3; EC=2.4.1.-; AltName: Full=Protein KOJAK;","A0A498KK82_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI08138.1};","--","GO:0005783,endoplasmic reticulum; GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005802,trans-Golgi network; GO:0016760,cellulose synthase (UDP-forming) activity; GO:0051753,mannan synthase activity; GO:0071555,cell wall organization; GO:0030244,cellulose biosynthetic process; GO:0009833,plant-type primary cell wall biogenesis; GO:0009409,response to cold; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0016759,cellulose synthase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0000030,mannosyltransferase activity; GO:0019187,beta-1,4-mannosyltransferase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0016051,carbohydrate biosynthetic process; GO:0030243,cellulose metabolic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0000278,mitotic cell cycle; GO:0000281,mitotic cytokinesis; GO:0000910,cytokinesis; GO:0007049,cell cycle; GO:0009832,plant-type cell wall biogenesis; GO:0022402,cell cycle process; GO:0042546,cell wall biogenesis; GO:0044085,cellular component biogenesis; GO:0051301,cell division; GO:0061640,cytoskeleton-dependent cytokinesis; GO:0071669,plant-type cell wall organization or biogenesis; GO:1903047,mitotic cell cycle process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0097708,intracellular vesicle; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery; GO:0031984,organelle subcompartment; GO:0098791,Golgi apparatus subcompartment","PF03552.17:Cellulose synthase","--","--","--"]
["MS14G01000",53.9823,66.7768,65.55,295.8355,237.5138,264.6837,266.3379,192.9052,224.1972,164.6237,172.1085,205.2402,219.3043,239.6619,228.7058,3103,3826,3691,12440,11931,12780,11623,7872,11643,7681,8468,11940,9892,10780,10307,1.727582736,"6.30881E-32","3.4847E-30","up",2.177221033,"1.48017E-68","2.15369E-66","up",2.313763944,"7.64029E-51","7.48597E-49","up",2.160565065,"5.28009E-35","1.76102E-33","up",0.445504193,0.01072327,0.032525917,false,-0.002154046,0.989216068,0.995185816,false,-0.155921738,0.379514945,0.796400893,false,0.603890868,"6.9331E-05",0.000666961,false,0.161516448,0.220772372,0.504565355,false,"chr_0014",1342200,1348218,"+","MS14G01000","--","K13863 solute carrier family 7 (cationic amino acid transporter), member 1 | (RefSeq) cationic amino acid transporter 2, vacuolar-like isoform X1 (A)","--","cationic amino acid transporter 2, vacuolar-like isoform X2 [Malus domestica]","CAAT2_ARATH RecName: Full=Cationic amino acid transporter 2, vacuolar;","A0A498IF50_MALDO RecName: Full=AA_permease_C domain-containing protein {ECO:0000259|Pfam:PF13906};","Amino acid transporters","GO:0016021,integral component of membrane; GO:0000325,plant-type vacuole; GO:0009705,plant-type vacuole membrane; GO:0015171,amino acid transmembrane transporter activity; GO:0080144,amino acid homeostasis; GO:0006865,amino acid transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005342,organic acid transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0046943,carboxylic acid transmembrane transporter activity; GO:0008150,biological_process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0006810,transport; GO:0015849,organic acid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005774,vacuolar membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle","PF13520.9:Amino acid permease","--","--","--"]
["MS14G01730",4.0616,2.3065,3.8333,0.1571,0.3946,0.7755,0.6561,0.3778,0.2545,0.8497,1.2982,0.6058,0.7324,0.5386,0.391,106,60,98,3,9,17,13,7,6,18,29,16,15,11,8,-1.715264082,"2.06419E-05","8.39742E-05","down",-2.321580846,"5.59602E-08","2.60258E-07","down",-2.720574945,"1.46784E-07","6.54314E-07","down",-2.711633643,"1.64026E-08","7.84275E-08","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0014",2166302,2168686,"-","MS14G01730","--","--","--","uncharacterized protein LOC103449404 [Malus domestica]","--","A0A498IJB0_MALDO RecName: Full=DUF4378 domain-containing protein {ECO:0000259|Pfam:PF14309};","--","--","--","--","--","--"]
["MS14G02250",7.4239,7.0177,7.0397,2.4807,2.6052,2.8675,3.2161,4.5547,4.0903,3.4552,3.3536,3.7491,2.9013,1.8553,2.483,225,212,209,55,69,73,74,98,112,85,87,115,69,44,59,-0.836698141,"1.01413E-05","4.38649E-05",false,-1.275025618,"7.86105E-08","3.58266E-07","down",-1.218737332,"5.40786E-09","2.95774E-08","down",-0.576228599,0.007792622,0.015183084,false,0.274846519,0.264233778,0.410064724,false,0.715596282,0.014492214,0.056540681,false,0.642470008,0.015096061,0.247349357,false,-0.364198076,0.135396233,0.285167894,false,0.081242757,0.782622113,0.9158468,false,"chr_0014",2831562,2835122,"+","MS14G02250","--","K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] | (RefSeq) 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic-like isoform X1 (A)","ko00340: Histidine metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01230: Biosynthesis of amino acids","1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]","HIS3_ARATH RecName: Full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic; EC=5.3.1.16 {ECO:0000269|PubMed:9747713}; AltName: Full=5-proFAR isomerase; AltName: Full=BBM II isomerase {ECO:0000303|PubMed:9747713}; AltName: Full=Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; AltName: Full=Protein ALBINO AND PALE GREEN 10; AltName: Full=Protein HISTIDINE BIOSYNTHESIS 3; Flags: Precursor;","A0A540LRU0_MALBA RecName: Full=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic {ECO:0000256|RuleBase:RU364022}; EC=5.3.1.16 {ECO:0000256|RuleBase:RU364022}; AltName: Full=5-proFAR isomerase {ECO:0000256|RuleBase:RU364022}; AltName: Full=Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|RuleBase:RU364022};","Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase","GO:0009507,chloroplast; GO:0005737,cytoplasm; GO:0003949,1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity; GO:0000105,histidine biosynthetic process; GO:0000162,tryptophan biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016853,isomerase activity; GO:0016860,intramolecular oxidoreductase activity; GO:0016861,intramolecular oxidoreductase activity, interconverting aldoses and ketoses; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006547,histidine metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006568,tryptophan metabolic process; GO:0006576,cellular biogenic amine metabolic process; GO:0006586,indolalkylamine metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0009072,aromatic amino acid family metabolic process; GO:0009073,aromatic amino acid family biosynthetic process; GO:0009308,amine metabolic process; GO:0009309,amine biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0042401,cellular biogenic amine biosynthetic process; GO:0042430,indole-containing compound metabolic process; GO:0042435,indole-containing compound biosynthetic process; GO:0044106,cellular amine metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046219,indolalkylamine biosynthetic process; GO:0046483,heterocycle metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901605,alpha-amino acid metabolic process; GO:1901607,alpha-amino acid biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00977.24:Histidine biosynthesis protein","--","--","--"]
["MS14G02730",5.8714,6.7424,6.4272,3.8637,3.3315,5.7478,3.0359,1.6062,2.6317,2.5855,4.2659,4.5787,2.9372,3.9997,3.1255,484,554,519,233,240,398,190,94,196,173,301,382,190,258,202,-0.55551818,0.011368368,0.024577265,false,-0.628817544,0.00030398,0.000790026,false,-0.352505538,0.109433244,0.158786955,false,-1.105355943,"5.99902E-06","2.01959E-05","down",-0.537134398,0.078806389,0.164226711,false,-0.461772693,0.088656017,0.216731465,false,-0.754744661,0.011204532,0.213347849,false,0.219701387,0.432188707,0.619435566,false,0.30070737,0.218365331,0.501296194,false,"chr_0014",3523073,3527823,"-","MS14G02730","--","K17756 long-chain-alcohol oxidase [EC:1.1.3.20] | (RefSeq) long-chain-alcohol oxidase FAO2-like (A)","--","uncharacterized protein LOC126593991 [Malus sylvestris]","FAO1_LOTJA RecName: Full=Long-chain-alcohol oxidase FAO1; EC=1.1.3.20; AltName: Full=Long-chain fatty alcohol oxidase 1;","A0A5N5GYT7_9ROSA RecName: Full=(R)-mandelonitrile lyase {ECO:0000256|ARBA:ARBA00013074}; EC=4.1.2.10 {ECO:0000256|ARBA:ARBA00013074};","--","GO:0016021,integral component of membrane; GO:0050660,flavin adenine dinucleotide binding; GO:0046577,long-chain-alcohol oxidase activity; GO:0006066,alcohol metabolic process; GO:0009409,response to cold; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0016899,oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00732.22:GMC oxidoreductase","--","--","--"]
["MS14G03620",9.7844,9.684,5.1455,9.9074,39.3191,7.491,25.4284,37.4953,20.092,41.4794,9.8145,14.4852,19.6479,13.9774,24.4134,297,293,153,220,1043,191,586,808,551,1022,255,445,468,332,581,1.631132529,0.021478445,0.04269251,"up",1.523332787,"3.761E-07","1.55346E-06","up",1.447623969,0.073988641,0.112560686,false,2.039708647,"6.99642E-10","3.96464E-09","up",0.426068134,0.392478329,0.545383985,false,0.530461718,0.072746931,0.187844157,false,0.580668189,0.473467323,0.843595975,false,-0.155824977,0.872045947,0.932134376,false,-0.042741445,0.957024307,0.986519166,false,"chr_0014",4893552,4895968,"+","MS14G03620","--","K08486 syntaxin 1B/2/3 | (RefSeq) syntaxin-121-like (A)","ko04130: SNARE interactions in vesicular transport","hypothetical protein C1H46_037563 [Malus baccata]","SY121_ARATH RecName: Full=Syntaxin-121 {ECO:0000303|PubMed:11718726}; Short=AtSYP121 {ECO:0000303|PubMed:11718726}; AltName: Full=Protein SYNTAXIN OF PLANTS 121 {ECO:0000303|PubMed:11718726}; AltName: Full=Syntaxin-related protein At-Syr1 {ECO:0000303|PubMed:9915701};","A0A540KRP0_MALBA RecName: Full=t-SNARE coiled-coil homology domain-containing protein {ECO:0000259|PROSITE:PS50192};","SNARE protein Syntaxin 1 and related proteins","GO:0009504,cell plate; GO:0005829,cytosol; GO:0012505,endomembrane system; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0031201,SNARE complex; GO:0005802,trans-Golgi network; GO:0043495,protein-membrane adaptor activity; GO:0005484,SNAP receptor activity; GO:0000149,SNARE binding; GO:0006952,defense response; GO:0050832,defense response to fungus; GO:0006887,exocytosis; GO:0006886,intracellular protein transport; GO:0072660,maintenance of protein location in plasma membrane; GO:0031348,negative regulation of defense response; GO:0072659,protein localization to plasma membrane; GO:0006612,protein targeting to membrane; GO:0010119,regulation of stomatal movement; GO:0009737,response to abscisic acid; GO:0009620,response to fungus; GO:0032940,secretion by cell; GO:0010148,transpiration; GO:0048278,vesicle docking; GO:0006906,vesicle fusion; GO:0016192,vesicle-mediated transport; GO:0003674,molecular_function; GO:0030674,protein-macromolecule adaptor activity; GO:0060090,molecular adaptor activity; GO:0005488,binding; GO:0005515,protein binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006810,transport; GO:0009987,cellular process; GO:0046903,secretion; GO:0051179,localization; GO:0051234,establishment of localization; GO:0140352,export from cell; GO:0008104,protein localization; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0032507,maintenance of protein location in cell; GO:0045185,maintenance of protein location; GO:0051235,maintenance of location; GO:0051651,maintenance of location in cell; GO:0051668,localization within membrane; GO:0072657,protein localization to membrane; GO:0072658,maintenance of protein location in membrane; GO:1990778,protein localization to cell periphery; GO:0031347,regulation of defense response; GO:0048519,negative regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0006605,protein targeting; GO:0090150,establishment of protein localization to membrane; GO:0010118,stomatal movement; GO:0050794,regulation of cellular process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0097305,response to alcohol; GO:1901700,response to oxygen-containing compound; GO:0006833,water transport; GO:0042044,fluid transport; GO:0022406,membrane docking; GO:0051640,organelle localization; GO:0140056,organelle localization by membrane tethering; GO:0006996,organelle organization; GO:0016043,cellular component organization; GO:0016050,vesicle organization; GO:0048284,organelle fusion; GO:0061024,membrane organization; GO:0061025,membrane fusion; GO:0071840,cellular component organization or biogenesis; GO:0090174,organelle membrane fusion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction; GO:0032991,protein-containing complex; GO:0098796,membrane protein complex; GO:0005794,Golgi apparatus; GO:0031984,organelle subcompartment; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098791,Golgi apparatus subcompartment","PF00804.28:Syntaxin","--","--","--"]
["MS14G04910",13.4363,13.0874,16.4596,5.9916,6.2397,5.684,6.117,6.9826,7.5661,7.3285,7.9555,6.8571,6.3504,4.5678,5.7902,515,500,618,168,209,183,178,190,262,228,261,266,191,137,174,-0.769900118,"1.8438E-06","9.14809E-06",false,-1.066485772,"3.24281E-08","1.55542E-07","down",-1.043177156,"5.64699E-09","3.07948E-08","down",-0.772057086,"6.61824E-06","2.21601E-05",false,0.010367557,0.95324042,0.972893386,false,0.310379241,0.142586369,0.302382756,false,0.268864693,0.167084808,0.622439185,false,-0.25641012,0.170159976,0.33365818,false,0.04975947,0.820841401,0.932497068,false,"chr_0014",7081872,7086179,"+","MS14G04910","--","K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] | (RefSeq) enoyl-[acyl-carrier-protein] reductase [NADH] 1, chloroplastic-like (A)","ko00061: Fatty acid biosynthesis; ko00780: Biotin metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01212: Fatty acid metabolism; ko01240: Biosynthesis of cofactors","enoyl-[acyl-carrier-protein]","FABI_ARATH RecName: Full=Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic; Short=ENR; EC=1.3.1.9; AltName: Full=NADH-dependent enoyl-ACP reductase 1; AltName: Full=Protein MOSAIC DEATH 1; Flags: Precursor;","M9T9I8_MALDO SubName: Full=Enoyl-ACP reductase {ECO:0000313|EMBL:AGJ00074.1}; EC=1.3.1.9 {ECO:0000313|EMBL:AGJ00074.1};","Reductases with broad range of substrate specificities","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0005835,fatty acid synthase complex; GO:0005739,mitochondrion; GO:0009579,thylakoid; GO:0005507,copper ion binding; GO:0004318,enoyl-[acyl-carrier-protein] reductase (NADH) activity; GO:0016631,enoyl-[acyl-carrier-protein] reductase activity; GO:0006633,fatty acid biosynthetic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0004312,fatty acid synthase activity; GO:0016491,oxidoreductase activity; GO:0016627,oxidoreductase activity, acting on the CH-CH group of donors; GO:0016628,oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006631,fatty acid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0032991,protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex","PF13561.9:Enoyl-(Acyl carrier protein) reductase","--","--","--"]
["MS14G05820",0.8017,1.0456,0.8675,0.0877,0.055,0.1909,0.1267,0.1355,0.213,0.4148,0.7493,0.2852,0.3882,0.1434,0.0409,50,65,53,4,3,10,6,6,12,21,40,18,19,7,2,-0.734923109,0.077327171,0.128260219,false,-1.941296649,0.001155974,0.002684276,"down",-2.819006377,"1.32652E-07","5.93984E-07","down",-2.219192832,"1.62862E-06","5.95957E-06","down",-1.482506195,0.014500736,0.041809573,"down","NA","NA","NA","NA","NA","NA","NA","NA",-2.081298061,0.002722624,0.014168124,"down","NA","NA","NA","NA","chr_0014",9154726,9157491,"-","MS14G05820","--","K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor protein kinase CLAVATA1-like (A)","--","leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 [Malus sylvestris]","PXC3_ARATH RecName: Full=Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 {ECO:0000305}; EC=2.7.10.1; AltName: Full=Protein PXY/TDR-CORRELATED 3 {ECO:0000303|PubMed:23815750}; Flags: Precursor;","A0A540NL21_MALBA RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0004714,transmembrane receptor protein tyrosine kinase activity; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0004713,protein tyrosine kinase activity; GO:0004888,transmembrane signaling receptor activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0019199,transmembrane receptor protein kinase activity; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0140096,catalytic activity, acting on a protein; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF13855.9:Leucine rich repeat","--","--","--"]
["MS14G06810",15.9194,13.4773,17.5072,41.1201,40.1398,39.3387,32.4452,33.7777,30.5165,23.1389,26.9884,25.9264,26.5588,28.2698,25.141,634,535,683,1198,1397,1316,981,955,1098,748,920,1045,830,881,785,0.883630269,"7.45041E-10","6.19348E-09",false,1.063909166,"5.45318E-13","4.51304E-12","up",1.58015712,"9.47971E-25","2.32589E-23","up",1.331686562,"6.34766E-17","6.9351E-16","up",0.459455267,0.000700996,0.003185997,false,0.281732273,0.045824662,0.134833161,false,-0.251605113,0.085296401,0.499179449,false,0.71354996,"5.6655E-08","1.27337E-06",false,0.541860601,"6.86962E-05",0.001623291,false,"chr_0014",10998734,11003723,"+","MS14G06810","--","--","--","uncharacterized protein LOC126593804 [Malus sylvestris]","--","A0A498ICS4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH81020.1};","--","--","--","--","--","--"]
["MS14G08070",8.8782,7.6543,7.5397,16.8408,12.1459,15.3737,15.0439,11.2617,15.7096,12.2698,14.2152,13.4819,14.2056,12.5913,10.6636,583,501,485,809,697,848,750,525,932,654,799,896,732,647,549,0.915113201,"6.40841E-11","6.12666E-10",false,0.9313533,"1.36149E-07","5.9959E-07",false,1.091574655,"1.80628E-09","1.04918E-08","up",1.082586607,"2.31054E-09","1.22726E-08","up",0.180716611,0.280294077,0.428480979,false,0.166984173,0.394901648,0.590517308,false,-0.009807123,0.959914419,0.989563427,false,0.19273393,0.241536,0.422926378,false,0.184965062,0.33947558,0.628897409,false,"chr_0014",15196823,15206004,"+","MS14G08070","--","K01209 alpha-L-arabinofuranosidase [EC:3.2.1.55] | (RefSeq) LOW QUALITY PROTEIN: alpha-L-arabinofuranosidase 1-like (A)","ko00520: Amino sugar and nucleotide sugar metabolism; ko01100: Metabolic pathways","alpha-L-arabinofuranosidase 1-like [Malus sylvestris]","ASD1_ARATH RecName: Full=Alpha-L-arabinofuranosidase 1; Short=AtASD1; EC=3.2.1.55; AltName: Full=Beta-D-xylosidase; EC=3.2.1.-; Flags: Precursor;","A0A498IG03_MALDO RecName: Full=Non-reducing end alpha-L-arabinofuranosidase {ECO:0000256|ARBA:ARBA00012670}; EC=3.2.1.55 {ECO:0000256|ARBA:ARBA00012670};","--","GO:0048046,apoplast; GO:0000325,plant-type vacuole; GO:0099503,secretory vesicle; GO:0046556,alpha-L-arabinofuranosidase activity; GO:0009044,xylan 1,4-beta-xylosidase activity; GO:0046373,L-arabinose metabolic process; GO:0045493,xylan catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0097599,xylanase activity; GO:0005975,carbohydrate metabolic process; GO:0005996,monosaccharide metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019321,pentose metabolic process; GO:0019566,arabinose metabolic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0000272,polysaccharide catabolic process; GO:0005976,polysaccharide metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0009987,cellular process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010410,hemicellulose metabolic process; GO:0016052,carbohydrate catabolic process; GO:0016998,cell wall macromolecule catabolic process; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0044347,cell wall polysaccharide catabolic process; GO:0045491,xylan metabolic process; GO:0071554,cell wall organization or biogenesis; GO:1901575,organic substance catabolic process; GO:2000895,hemicellulose catabolic process; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0097708,intracellular vesicle","PF06964.15:Alpha-L-arabinofuranosidase C-terminal domain","--","--","--"]
["MS14G09030",242.357,287.4081,276.8565,42.3905,29.4661,72.1689,18.9983,21.8706,34.2306,195.7256,302.7205,222.9929,153.5334,189.8532,129.1031,5713,6753,6393,731,607,1429,340,366,729,3745,6108,5320,2840,3502,2386,0.018852671,0.913471633,0.938138605,false,-0.478401309,0.005452167,0.011006059,false,-2.289114239,"1.48827E-15","1.68617E-14","down",-3.150248716,"1.93929E-48","1.1402E-46","down",-3.156266762,"1.99141E-36","3.87452E-34","down",-2.654401535,"3.07539E-27","1.05068E-24","down",-0.858753489,0.009965722,0.201751681,false,-2.294572766,"5.08321E-14","3.69046E-12","down",-1.786925957,"2.38168E-09","2.56751E-07","down","chr_0014",17346527,17347641,"+","MS14G09030","--","K09873 aquaporin TIP | (RefSeq) aquaporin TIP1-1 (A)","--","aquaporin TIP1-1 [Malus domestica]","TIP11_ARATH RecName: Full=Aquaporin TIP1-1; AltName: Full=Aquaporin TIP; AltName: Full=Gamma-tonoplast intrinsic protein; Short=Gamma-TIP; AltName: Full=Tonoplast intrinsic protein 1-1; Short=AtTIP1;1; AltName: Full=Tonoplast intrinsic protein, root-specific RB7;","A0A498IF76_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH80802.1};","Aquaporin (major intrinsic protein family)","GO:0042807,central vacuole; GO:0009941,chloroplast envelope; GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0000325,plant-type vacuole; GO:0009705,plant-type vacuole membrane; GO:0000326,protein storage vacuole; GO:0015204,urea transmembrane transporter activity; GO:0015250,water channel activity; GO:0080170,hydrogen peroxide transmembrane transport; GO:0015840,urea transport; GO:0006833,water transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0022857,transmembrane transporter activity; GO:0042887,amide transmembrane transporter activity; GO:0005372,water transmembrane transporter activity; GO:0015267,channel activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022803,passive transmembrane transporter activity; GO:0006810,transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0019755,one-carbon compound transport; GO:0042886,amide transport; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0042044,fluid transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009536,plastid; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031224,intrinsic component of membrane; GO:0005774,vacuolar membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0000322,storage vacuole","PF00230.23:Major intrinsic protein","--","--","--"]
["MS14G09500",3.2024,3.4963,4.8076,6.8239,7.6524,8.4098,2.2331,2.3881,8.4445,5.8019,4.6216,14.425,3.7209,6.8609,3.7242,34,37,50,53,71,75,18,18,81,50,42,155,31,57,31,1.305069885,0.005399644,0.012738695,"up",0.608200776,0.11065636,0.160297053,false,1.2107225,"6.80068E-05",0.000198515,"up",0.455027628,0.397419274,0.479817582,false,-0.831158497,0.175687878,0.30367469,false,-0.132852302,0.811603328,0.896658371,false,-0.750604683,0.14486227,0.600168565,false,-0.073490758,0.870738446,0.931515968,false,0.62796907,0.070824926,0.263896396,false,"chr_0014",18385080,18389647,"+","MS14G09500","--","--","--","hypothetical protein D8674_041351 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5GUI7_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2614394.1};","--","--","--","--","--","--"]
["MS14G10900",0.5427,0.8745,0.3526,0.0674,0,0.0979,0.0217,0.1853,0,0.1216,0.2498,0.2275,0.0629,0,0.0629,33,53,21,3,0,5,1,8,0,6,13,14,3,0,3,-1.382966729,0.011697184,0.025181285,"down",-3.524698031,"1.70367E-05","5.49761E-05","down",-3.248513893,"6.29436E-05",0.000184713,"down",-2.855802028,0.002004565,0.00441485,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0014",20708150,20711829,"-","MS14G10900","--","K05681 ATP-binding cassette, subfamily G (WHITE), member 2 | (RefSeq) ABC transporter G family member 20-like (A)","ko02010: ABC transporters","ABC transporter G family member 20-like [Malus domestica]","AB20G_ARATH RecName: Full=ABC transporter G family member 20; Short=ABC transporter ABCG.20; Short=AtABCG20; AltName: Full=Probable white-brown complex homolog protein 20; Short=AtWBC20;","A0A540LAU7_MALBA RecName: Full=ABC transporter domain-containing protein {ECO:0000259|PROSITE:PS50893};","Transporter, ABC superfamily (Breast cancer resistance protein)","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0005524,ATP binding; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:1903825,organic acid transmembrane transport; GO:0010345,suberin biosynthetic process; GO:0055085,transmembrane transport; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005215,transporter activity; GO:0015399,primary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0140657,ATP-dependent activity; GO:0006810,transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015849,organic acid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0006725,cellular aromatic compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009698,phenylpropanoid metabolic process; GO:0009699,phenylpropanoid biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019748,secondary metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044550,secondary metabolite biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF01061.27:ABC-2 type transporter","--","--","--"]
["MS14G11000",12.8647,8.1889,4.5272,1.3065,1.8812,1.2516,1.0827,4.9006,3.6392,2.5198,1.139,0.4155,0.9744,0.6107,0.6583,673,427,232,50,86,55,43,182,172,107,51,22,40,25,27,-2.448969138,0.002290441,0.005923755,"down",-3.224629162,"4.31877E-16","4.74037E-15","down",-2.310650633,"1.2197E-08","6.34431E-08","down",-1.139898896,0.023647592,0.041341944,"down",1.328637493,0.043685676,0.103153392,false,2.102440321,"2.90497E-05",0.000339134,"up",1.171803057,0.020609652,0.281614139,false,0.160701201,0.787256482,0.883628554,false,0.941439398,0.012097172,0.082304715,false,"chr_0014",20927772,20930008,"-","MS14G11000","--","K07195 exocyst complex component 7 | (RefSeq) exocyst complex component EXO70H1-like (A)","--","exocyst complex component EXO70H1-like [Malus domestica]","E70H1_ARATH RecName: Full=Exocyst complex component EXO70H1 {ECO:0000303|PubMed:16942608}; Short=AtExo70h1 {ECO:0000303|PubMed:16942608}; AltName: Full=Exocyst subunit Exo70 family protein H1 {ECO:0000303|PubMed:16942608};","A0A540LAE8_MALBA RecName: Full=Exocyst subunit Exo70 family protein {ECO:0000256|RuleBase:RU365026};","Exocyst component protein and related proteins","GO:0005829,cytosol; GO:0012505,endomembrane system; GO:0000145,exocyst; GO:0016020,membrane; GO:0005634,nucleus; GO:0045335,phagocytic vesicle; GO:0031982,vesicle; GO:0005546,phosphatidylinositol-4,5-bisphosphate binding; GO:0006952,defense response; GO:0006887,exocytosis; GO:1900426,positive regulation of defense response to bacterium; GO:0009617,response to bacterium; GO:0009620,response to fungus; GO:0002237,response to molecule of bacterial origin; GO:0003674,molecular_function; GO:0005488,binding; GO:0005543,phospholipid binding; GO:0008289,lipid binding; GO:0035091,phosphatidylinositol binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:1901981,phosphatidylinositol phosphate binding; GO:1902936,phosphatidylinositol bisphosphate binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0006810,transport; GO:0009987,cellular process; GO:0016192,vesicle-mediated transport; GO:0032940,secretion by cell; GO:0046903,secretion; GO:0051179,localization; GO:0051234,establishment of localization; GO:0140352,export from cell; GO:0002831,regulation of response to biotic stimulus; GO:0002833,positive regulation of response to biotic stimulus; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0031347,regulation of defense response; GO:0031349,positive regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0032103,positive regulation of response to external stimulus; GO:0042742,defense response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0048518,positive regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0051707,response to other organism; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0098542,defense response to other organism; GO:1900424,regulation of defense response to bacterium; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0005938,cell cortex; GO:0032991,protein-containing complex; GO:0071944,cell periphery; GO:0099023,vesicle tethering complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0030139,endocytic vesicle; GO:0031410,cytoplasmic vesicle; GO:0097708,intracellular vesicle","PF03081.18:Exo70 exocyst complex subunit","--","--","--"]
["MS14G11920",10.5831,9.5773,5.3288,88.4625,89.927,40.9896,74.7853,101.481,112.3917,28.499,19.7576,24.729,58.2753,51.6309,40.2676,296,267,146,1810,2198,963,1588,2015,2840,647,473,700,1279,1130,883,1.706084143,"7.51244E-09","5.41619E-08","up",2.847332381,"2.6124E-25","5.69465E-24","up",3.329959294,"1.18579E-18","1.78744E-17","up",3.772903552,"7.48743E-42","3.35468E-40","up",2.083687963,"3.5658E-20","2.01773E-18","up",0.943058309,"1.26498E-05",0.00016622,false,0.441676891,0.188989379,0.647039685,false,1.644556214,"1.42636E-06","2.25571E-05","up",0.509690444,0.122529247,0.363703756,false,"chr_0014",22349305,22352005,"-","MS14G11920","--","K07025 putative hydrolase of the HAD superfamily | (RefSeq) suppressor of disruption of TFIIS-like (A)","--","suppressor of disruption of TFIIS-like [Malus sylvestris]","--","A0A498IAQ4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH80506.1};","Haloacid dehalogenase-like hydrolase","--","PF13419.9:Haloacid dehalogenase-like hydrolase","--","--","--"]
["MS14G12790",30.7043,28.4751,33.6378,87.3904,61.0723,78.5746,69.5095,47.5049,62.4727,60.4928,67.8936,71.1094,82.0743,90.3756,77.4342,1230,1137,1320,2561,2138,2644,2114,1351,2261,1967,2328,2883,2580,2833,2432,1.290315601,"2.94331E-27","1.19969E-25","up",1.722462899,"6.07273E-42","3.28517E-40","up",1.502855017,"1.94334E-18","2.86414E-17","up",1.235207713,"4.37855E-12","3.12453E-11","up",-0.042777131,0.80849397,0.880702524,false,-0.472672406,0.008204447,0.036521087,false,-0.269450417,0.189262073,0.647039685,false,0.229137063,0.167759291,0.330615315,false,-0.195368533,0.247004054,0.535643558,false,"chr_0014",23785155,23806953,"-","MS14G12790","--","K13691 pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 74F2-like (A)","--","hypothetical protein C1H46_036838 [Malus baccata]","UGT8_CATRO RecName: Full=7-deoxyloganetic acid glucosyltransferase; EC=2.4.1.323; AltName: Full=UDP-glucose glucosyltransferase 8; Short=CrUGT8; AltName: Full=UDP-glycosyltransferase 709C2;","A0A540KU24_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD77629.1};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0102970,7-deoxyloganetic acid glucosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:1900994,(-)-secologanin biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0008194,UDP-glycosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0006081,cellular aldehyde metabolic process; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016098,monoterpenoid metabolic process; GO:0016099,monoterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0016137,glycoside metabolic process; GO:0016138,glycoside biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0046184,aldehyde biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0120254,olefinic compound metabolic process; GO:0120255,olefinic compound biosynthetic process; GO:1900992,(-)-secologanin metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901657,glycosyl compound metabolic process; GO:1901659,glycosyl compound biosynthetic process; GO:1901804,beta-glucoside metabolic process; GO:1901806,beta-glucoside biosynthetic process","PF00201.21:UDP-glucoronosyl and UDP-glucosyl transferase","--","--","--"]
["MS14G13590",13.5838,12.9189,14.4306,28.7136,28.0551,26.7946,29.5005,31.7037,31.9045,21.1161,21.4695,18.4195,27.3312,23.9078,24.0873,615,583,640,951,1110,1019,1014,1019,1305,776,832,844,971,847,855,0.763355212,"3.08313E-08","2.0419E-07",false,1.174568227,"7.3325E-18","9.40426E-17","up",1.246827165,"6.35995E-20","1.06127E-18","up",1.469520812,"7.57329E-32","2.13155E-30","up",0.718719952,"3.38961E-07","3.49492E-06",false,0.310424514,0.025993704,0.088553954,false,0.220503841,0.11716622,0.558605756,false,0.500436514,0.00125429,0.007532371,false,0.098282869,0.514107658,0.767518595,false,"chr_0014",24821816,24825807,"+","MS14G13590","--","--","--","uncharacterized protein LOC103452949 [Malus domestica]","APD2_ARATH RecName: Full=E3 ubiquitin-protein ligase APD2 {ECO:0000305}; EC=2.3.2.27 {ECO:0000269|PubMed:22897245}; AltName: Full=Protein ABERRANT POLLEN DEVELOPMENT 2 {ECO:0000303|PubMed:22897245};","A0A498IIB6_MALDO RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};","--","GO:0005768,endosome; GO:0016021,integral component of membrane; GO:0009705,plant-type vacuole membrane; GO:0046872,metal ion binding; GO:0004842,ubiquitin-protein transferase activity; GO:0000278,mitotic cell cycle; GO:0009555,pollen development; GO:0016567,protein ubiquitination; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0140096,catalytic activity, acting on a protein; GO:0007049,cell cycle; GO:0008150,biological_process; GO:0009987,cellular process; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0000325,plant-type vacuole; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle","PF16041.8:Domain of unknown function (DUF4793)","--","--","--"]
["MS14G14400",85.6347,92.1463,74.1924,65.4161,97.9282,100.7147,80.3213,78.3277,35.6842,191.7282,160.6954,180.757,128.5306,156.0715,177.8309,3060,3282,2597,1710,3058,3023,2179,1987,1152,5561,4915,6537,3604,4364,4982,1.270589846,"5.24493E-15","7.86766E-14","up",1.163591407,"1.60241E-12","1.25678E-11","up",0.279534381,0.192870602,0.25897506,false,-0.078187348,0.802210665,0.84525473,false,-1.33775724,"2.35451E-05",0.000159929,"down",-1.23065486,"6.17028E-05",0.000645071,"down",-0.364531919,0.287773768,0.733881238,false,-0.971773892,"6.60108E-06","8.62729E-05",false,-0.857698974,"9.98483E-05",0.002186094,false,"chr_0014",26256119,26258293,"+","MS14G14400","--","K14496 abscisic acid receptor PYR/PYL family | (RefSeq) abscisic acid receptor PYL4-like isoform X1 (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction","abscisic acid receptor PYL4-like isoform X1 [Malus domestica]","PYL4_ARATH RecName: Full=Abscisic acid receptor PYL4 {ECO:0000303|PubMed:19407142, ECO:0000303|PubMed:19624469, ECO:0000303|PubMed:19898420, ECO:0000303|PubMed:21658606, ECO:0000303|PubMed:23844015, ECO:0000303|PubMed:24563205}; AltName: Full=ABI1-binding protein 2 {ECO:0000303|PubMed:19874541}; AltName: Full=PYR1-like protein 4 {ECO:0000303|PubMed:19407142, ECO:0000303|PubMed:19624469, ECO:0000303|PubMed:19898420, ECO:0000303|PubMed:21658606, ECO:0000303|PubMed:23844015, ECO:0000303|PubMed:24563205}; AltName: Full=Regulatory components of ABA receptor 10;","A0A498IIF5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH81915.1};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0009705,plant-type vacuole membrane; GO:0005886,plasma membrane; GO:0010427,abscisic acid binding; GO:0042803,protein homodimerization activity; GO:0004864,protein phosphatase inhibitor activity; GO:0038023,signaling receptor activity; GO:0044389,ubiquitin-like protein ligase binding; GO:0009738,abscisic acid-activated signaling pathway; GO:0080163,regulation of protein serine/threonine phosphatase activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0008289,lipid binding; GO:0019840,isoprenoid binding; GO:0031406,carboxylic acid binding; GO:0033293,monocarboxylic acid binding; GO:0036094,small molecule binding; GO:0042562,hormone binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0043177,organic acid binding; GO:0043178,alcohol binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0004857,enzyme inhibitor activity; GO:0019208,phosphatase regulator activity; GO:0019212,phosphatase inhibitor activity; GO:0019888,protein phosphatase regulator activity; GO:0030234,enzyme regulator activity; GO:0098772,molecular function regulator activity; GO:0060089,molecular transducer activity; GO:0019899,enzyme binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006470,protein dephosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0010921,regulation of phosphatase activity; GO:0016311,dephosphorylation; GO:0019220,regulation of phosphate metabolic process; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031399,regulation of protein modification process; GO:0035303,regulation of dephosphorylation; GO:0035304,regulation of protein dephosphorylation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043666,regulation of phosphoprotein phosphatase activity; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0050790,regulation of catalytic activity; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051174,regulation of phosphorus metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051336,regulation of hydrolase activity; GO:0060255,regulation of macromolecule metabolic process; GO:0065009,regulation of molecular function; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0000325,plant-type vacuole; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0071944,cell periphery","PF10604.12:Polyketide cyclase / dehydrase and lipid transport","--","--","--"]
["MS14G15120",442.6179,615.7858,589.5661,79.9892,13.7353,37.3616,7.0817,28.5318,111.6849,88.8804,135.412,50.0344,26.2907,43.142,28.0681,3540,4909,4619,468,96,251,43,162,807,577,927,405,165,270,176,-2.4049986,"2.56819E-14","3.57142E-13","down",-3.787281838,"1.02396E-66","1.39377E-64","down",-3.444109164,"8.77929E-13","7.52735E-12","down",-3.240909211,0.000860386,0.002022646,"down",-0.818310318,0.427630858,0.578827893,false,0.572908951,0.564218215,0.733136623,false,0.217647289,0.848375949,0.96485401,false,-1.029978675,0.058700748,0.155558077,false,0.363373437,0.471688304,0.738158109,false,"chr_0014",27405005,27405346,"+","MS14G15120","--","--","--","non-specific lipid-transfer protein isoform X2 [Malus domestica]","NLTP_MALDO RecName: Full=Non-specific lipid-transfer protein; Short=LTP; AltName: Allergen=Mal d 3; Flags: Precursor;","A0A498IKL0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH81991.1};","--","GO:0008289,lipid binding; GO:0006869,lipid transport; GO:0003674,molecular_function; GO:0005488,binding; GO:0006810,transport; GO:0008150,biological_process; GO:0010876,lipid localization; GO:0033036,macromolecule localization; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport","PF00234.25:Protease inhibitor/seed storage/LTP family","--","--","--"]
["MS14G16080",4.715,5.2923,4.0507,1.1487,1.3889,1.6673,1.1068,1.7755,1.6018,2.5305,3.1087,2.4908,1.1898,1.0142,1.7267,101,113,85,18,26,30,18,27,31,44,57,54,20,17,29,-0.609555338,0.021262533,0.042303179,false,-1.549185192,"3.16783E-06","1.14709E-05","down",-1.525982112,"1.9384E-06","7.32054E-06","down",-1.370870293,"2.74331E-05","8.33386E-05","down",-0.748081667,0.035628763,0.087754326,false,0.196072609,0.654665761,0.797875698,false,0.157071719,0.707024434,0.924453185,false,-0.900862739,0.010789286,0.042704468,false,0.046794889,0.913860863,0.970653602,false,"chr_0014",28500577,28502060,"+","MS14G16080","--","--","--","uncharacterized protein LOC103450811 [Malus domestica]","--","A0A498IJE4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH82102.1};","--","--","--","--","--","--"]
["MS14G17110",164.1755,196.4342,247.0373,352.9162,386.1668,528.9063,340.5259,190.831,260.7122,384.7079,579.7656,532.455,384.4004,524.1057,388.137,5114,6099,7538,8042,10512,13839,8053,4220,7337,9727,15458,16786,9396,12775,9479,1.483699793,"4.25627E-14","5.78552E-13","up",1.388579638,"2.91661E-13","2.47765E-12","up",1.272622819,"1.19243E-09","7.10637E-09","up",0.670632416,0.005764666,0.011546409,false,-0.802854564,0.001088272,0.004661961,false,-0.704445731,0.00312711,0.016858855,false,-0.606460622,0.015680254,0.250995344,false,-0.195158315,0.345920044,0.53706149,false,-0.090327692,0.657144591,0.853480934,false,"chr_0014",29475118,29477286,"-","MS14G17110","--","--","--","dormancy-associated protein homolog 3-like isoform X1 [Malus sylvestris]","DRMH3_ARATH RecName: Full=Dormancy-associated protein homolog 3 {ECO:0000305}; AltName: Full=DRM1 homolog 3 {ECO:0000305};","A0A540M5G2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD93759.1};","--","--","PF05564.15:Dormancy/auxin associated protein","--","--","--"]
["MS14G18010",8.3921,8.2909,10.0712,2.4958,2.0526,2.3642,2.1517,3.8351,3.7936,2.0915,2.3576,3.0066,1.6736,1.4327,1.1848,262,258,308,57,56,62,51,85,107,53,63,95,41,35,29,-1.649816903,"3.33485E-14","4.5815E-13","down",-2.344447952,"3.15599E-22","5.48437E-21","down",-1.74031486,"9.33602E-16","1.08203E-14","down",-1.168992484,"5.53322E-06","1.87188E-05","down",0.498267217,0.121712572,0.229207592,false,1.191045593,0.000584989,0.004244466,"up",0.57012962,0.073563213,0.472091961,false,-0.069451632,0.807188104,0.895293475,false,0.630290895,0.044327861,0.195961665,false,"chr_0014",30490636,30494593,"+","MS14G18010","--","K17426 large subunit ribosomal protein L45 | (RefSeq) 39S ribosomal protein L45, mitochondrial (A)","--","39S ribosomal protein L45, mitochondrial [Malus domestica]","--","A0A6P5SVD4_PRUAV SubName: Full=39S ribosomal protein L45, mitochondrial {ECO:0000313|RefSeq:XP_021817591.1, ECO:0000313|RefSeq:XP_021817592.1};","Putative mitochondrial/chloroplast ribosomal protein L45","GO:0005840,ribosome; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF04280.18:Tim44-like domain","--","--","--"]
["MS14G18990",3.4635,8.2861,6.5275,1.2747,0.4573,0.6344,0.3509,0,0,1.477,4.2021,2.5009,1.6976,2.0429,1.3593,26,62,48,7,3,4,2,0,0,9,27,19,10,12,8,-0.983487596,0.054471803,0.095007024,false,-1.546318027,0.002322222,0.005078217,"down",-2.760554598,"1.47767E-05","4.83617E-05","down",-5.467965563,"2.13887E-06","7.69239E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0014",31673966,31674730,"-","MS14G18990","--","K05275 pyridoxine 4-dehydrogenase [EC:1.1.1.65] | (RefSeq) pyridoxal reductase, chloroplastic isoform X1 (A)","ko00750: Vitamin B6 metabolism; ko01100: Metabolic pathways","perakine reductase-like [Malus sylvestris]","PERR_RAUSE RecName: Full=Perakine reductase; EC=1.1.1.317;","A0A5N5HQH6_9ROSA SubName: Full=Aldo-keto reductase 1 {ECO:0000313|EMBL:KAB2629848.1};","Voltage-gated shaker-like K+ channel, subunit beta/KCNAB","GO:0016491,oxidoreductase activity; GO:0009820,alkaloid metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process","PF00248.24:Aldo/keto reductase family","--","--","--"]
["MS14G20040",2.6629,3.5175,4.4174,0.7584,0.9395,0.6604,1.2861,0.969,1.7685,1.2302,1.8666,0.9867,1.4705,1.106,1.2737,120,158,195,25,37,25,44,31,72,45,72,45,52,39,45,-1.194918112,0.000156028,0.000536951,"down",-1.162038011,"4.0768E-05",0.000123644,"down",-1.941386817,"2.63428E-09","1.50143E-08","down",-1.108592349,0.00033382,0.000843625,"down",0.094255312,0.802840528,0.87726912,false,0.069883263,0.837362813,0.91108004,false,0.82732484,0.031510306,0.336529056,false,-0.731682482,0.068778513,0.175640127,false,-0.752224133,0.035933601,0.171459383,false,"chr_0014",32683519,32686272,"+","MS14G20040","--","--","--","U-box domain-containing protein 9-like [Malus sylvestris]","PUB9_ARATH RecName: Full=U-box domain-containing protein 9; EC=2.3.2.27; AltName: Full=Plant U-box protein 9; AltName: Full=RING-type E3 ubiquitin transferase PUB9 {ECO:0000305};","A0A498IG22_MALDO RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483}; EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};","FOG: Armadillo/beta-catenin-like repeats","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0070696,transmembrane receptor protein serine/threonine kinase binding; GO:0004842,ubiquitin-protein transferase activity; GO:0009738,abscisic acid-activated signaling pathway; GO:0071215,cellular response to abscisic acid stimulus; GO:0048527,lateral root development; GO:0016567,protein ubiquitination; GO:0003674,molecular_function; GO:0005102,signaling receptor binding; GO:0005488,binding; GO:0005515,protein binding; GO:0033612,receptor serine/threonine kinase binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048364,root development; GO:0048528,post-embryonic root development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0090696,post-embryonic plant organ development; GO:0099402,plant organ development; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0016020,membrane; GO:0071944,cell periphery","PF04564.18:U-box domain","--","--","--"]
["MS14G20510",1.0922,1.1871,0.9292,0.5475,0.8332,0.6718,0.6714,0.6411,0.4634,0.4934,0.7656,0.6835,0.2552,0.2792,0.3018,60,65,50,22,40,31,28,25,23,22,36,38,11,12,13,-0.540879725,0.097210656,0.155894725,false,-1.650339507,"3.30379E-05",0.00010168,"down",-0.422514488,0.222425411,0.292773136,false,-0.577001388,0.105924514,0.155294489,false,-0.021078751,0.958091717,0.975656301,false,1.091019263,0.020758616,0.074478567,false,-0.15593886,0.705470603,0.923932208,false,0.137011878,0.73042507,0.847693232,false,1.253713103,0.0064682,0.052746566,false,"chr_0014",33062199,33064547,"+","MS14G20510","--","no KO assigned | (RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g50270-like (A)","--","pentatricopeptide repeat-containing protein [Pyrus ussuriensis x Pyrus communis]","PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330;","A0A5N5HTC3_9ROSA SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:KAB2629983.1};","FOG: PPR repeat","GO:0043231,intracellular membrane-bounded organelle; GO:0003723,RNA binding; GO:0008270,zinc ion binding; GO:0009451,RNA modification; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016070,RNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0110165,cellular anatomical entity","PF01535.23:PPR repeat","--","--","--"]
["MS15G00050",4.0271,4.0934,4.1651,1.5211,2.3041,2.2079,1.9543,2.0899,0.9971,6.3322,5.5715,3.9791,1.1479,1.7606,1.2165,76,77,77,21,38,35,28,28,17,97,90,76,17,26,18,0.556189512,0.043815149,0.078877945,false,-1.283277413,0.000111498,0.000313142,"down",-0.803162712,0.010165985,0.019339849,false,-1.008087819,0.006949513,0.013681955,"down",-1.553745102,0.000117164,0.000662189,"down",0.29408332,0.540423541,0.714547651,false,-0.201669994,0.659669309,0.91155747,false,-1.345641035,0.000152712,0.001298694,"down",0.504563652,0.232788643,0.518476143,false,"chr_0015",146672,147666,"-","MS15G00050","--","--","--","uncharacterized protein LOC126631789 isoform X1 [Malus sylvestris]","--","A0A5N5HS55_9ROSA SubName: Full=PCTP-like protein {ECO:0000313|EMBL:KAB2628350.1};","--","GO:0008289,lipid binding; GO:0003674,molecular_function; GO:0005488,binding","PF01852.22:START domain","--","--","--"]
["MS15G01040",9.8144,8.1643,10.2689,3.9141,3.1687,3.8124,3.1264,3.3434,3.4612,4.5719,6.4923,4.4485,3.913,3.924,5.1898,521,432,534,152,147,170,126,126,166,197,295,239,163,163,216,-0.683022935,0.000542256,0.001638635,false,-0.824595572,"1.0242E-05","3.43343E-05",false,-1.162580446,"2.29503E-10","1.49649E-09","down",-1.224509867,"5.05518E-12","3.5799E-11","down",-0.529985824,0.015673209,0.044570345,false,-0.384320888,0.06346051,0.170681573,false,-0.063032261,0.748387961,0.937780753,false,-0.464262492,0.040374021,0.117440039,false,-0.313138898,0.139014853,0.391106729,false,"chr_0015",1079058,1081540,"-","MS15G01040","--","K16221 transcription factor TCP21 (protein CCA1 HIKING EXPEDITION) | (RefSeq) transcription factor TCP7-like (A)","ko04712: Circadian rhythm - plant","hypothetical protein DVH24_033154 [Malus domestica]","TCP8_ARATH RecName: Full=Transcription factor TCP8;","A0A498J986_MALDO RecName: Full=TCP domain-containing protein {ECO:0000259|PROSITE:PS51369};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0000978,RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0043565,sequence-specific DNA binding; GO:0000976,transcription cis-regulatory region binding; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0000977,RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000987,cis-regulatory region sequence-specific DNA binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03634.16:TCP family transcription factor","TCP","TF","TCP"]
["MS15G02640",2.3518,1.55,0.5432,0.3989,0.825,0.7357,0.6783,2.6599,1.9761,3.701,2.2462,0.5767,1.1594,1.0091,0.9196,137,90,31,17,42,36,30,110,104,175,112,34,53,46,42,0.746477181,0.249920281,0.341615903,false,-0.24323103,0.612042291,0.682493701,false,-0.972242094,0.081892731,0.123112677,false,0.525773659,0.361239285,0.442783893,false,-0.203915505,0.752712436,0.842655847,false,0.786539766,0.0869609,0.213764439,false,1.498209427,0.004643514,0.135645693,false,-1.701048731,0.00622779,0.027472926,"down",-0.697639583,0.069222019,0.26026803,false,"chr_0015",3564735,3567225,"+","MS15G02640","--","K13436 pto-interacting protein 1 [EC:2.7.11.1] | (RefSeq) PTI1-like tyrosine-protein kinase 1 isoform X1 (A)","ko04626: Plant-pathogen interaction","serine/threonine-protein kinase-like protein CCR4 [Malus domestica]","ACCR4_ARATH RecName: Full=Serine/threonine-protein kinase-like protein CCR4; EC=2.7.11.1; AltName: Full=CRINKLY 4-related kinase 1; Short=AtCRK1; AltName: Full=Protein CRINKLY 4 RELATED 4; Short=AtCCR4; Flags: Precursor;","A0A540LZX6_MALBA RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","Serine/threonine protein kinase","GO:0016021,integral component of membrane; GO:0005524,ATP binding; GO:0042803,protein homodimerization activity; GO:0004672,protein kinase activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00069.28:Protein kinase domain","--","--","--"]
["MS15G03690",0.7078,0.6904,0.5218,0.8869,1.2599,1.1235,1.3725,0.7754,1.5015,0.7751,0.6661,1.0684,1.2277,0.9799,0.978,36,35,26,33,56,48,53,28,69,32,29,55,49,39,39,0.577107209,0.12264569,0.189229441,false,1.021992911,0.002721442,0.005875109,"up",0.986175264,0.005397716,0.010918599,false,1.205899132,0.001358047,0.003083643,"up",0.644115595,0.09455115,0.189342261,false,0.201687995,0.56907916,0.736610304,false,0.217325802,0.552958361,0.875326439,false,0.428808648,0.240311656,0.421603964,false,-0.008526694,0.979437422,0.994027031,false,"chr_0015",5186337,5189434,"-","MS15G03690","--","K09490 endoplasmic reticulum chaperone BiP [EC:3.6.4.10] | (RefSeq) luminal-binding protein 5-like (A)","ko03060: Protein export; ko04141: Protein processing in endoplasmic reticulum","hypothetical protein DVH24_033461 [Malus domestica]","BIP3_ARATH RecName: Full=Heat shock 70 kDa protein BIP3; AltName: Full=BiP chaperone BIP-L {ECO:0000303|PubMed:12853141}; AltName: Full=Heat shock 70 kDa protein 13 {ECO:0000303|PubMed:11599561}; AltName: Full=Heat shock protein 70-13 {ECO:0000303|PubMed:11599561}; Short=AtHsp70-13 {ECO:0000303|PubMed:11599561}; AltName: Full=Hsp70 protein BiP chaperone BIP-L {ECO:0000305}; AltName: Full=Luminal-binding protein 3; Short=AtBP3; Short=BiP3 {ECO:0000303|PubMed:21482766}; Flags: Precursor;","A0A498JCJ9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH92565.1};","Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily","GO:0005737,cytoplasm; GO:0034663,endoplasmic reticulum chaperone complex; GO:0005788,endoplasmic reticulum lumen; GO:0016592,mediator complex; GO:0016020,membrane; GO:0005634,nucleus; GO:0099503,secretory vesicle; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0140662,ATP-dependent protein folding chaperone; GO:0031072,heat shock protein binding; GO:0051787,misfolded protein binding; GO:0044183,protein folding chaperone; GO:0051082,unfolded protein binding; GO:0034620,cellular response to unfolded protein; GO:0051085,chaperone cofactor-dependent protein refolding; GO:0030968,endoplasmic reticulum unfolded protein response; GO:0009860,pollen tube growth; GO:0042026,protein refolding; GO:0000304,response to singlet oxygen; GO:0030433,ubiquitin-dependent ERAD pathway; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0005515,protein binding; GO:0006950,response to stress; GO:0006986,response to unfolded protein; GO:0008150,biological_process; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0033554,cellular response to stress; GO:0035966,response to topologically incorrect protein; GO:0035967,cellular response to topologically incorrect protein; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0006457,protein folding; GO:0006458,'de novo' protein folding; GO:0051084,'de novo' post-translational protein folding; GO:0061077,chaperone-mediated protein folding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0023052,signaling; GO:0034976,response to endoplasmic reticulum stress; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0000003,reproduction; GO:0000902,cell morphogenesis; GO:0000904,cell morphogenesis involved in differentiation; GO:0003006,developmental process involved in reproduction; GO:0009653,anatomical structure morphogenesis; GO:0009826,unidimensional cell growth; GO:0009856,pollination; GO:0009932,cell tip growth; GO:0016049,cell growth; GO:0022414,reproductive process; GO:0030154,cell differentiation; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0040007,growth; GO:0044706,multi-multicellular organism process; GO:0048468,cell development; GO:0048588,developmental cell growth; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0048868,pollen tube development; GO:0048869,cellular developmental process; GO:0060560,developmental growth involved in morphogenesis; GO:0000302,response to reactive oxygen species; GO:0006979,response to oxidative stress; GO:0010035,response to inorganic substance; GO:1901700,response to oxygen-containing compound; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0010243,response to organonitrogen compound; GO:0010498,proteasomal protein catabolic process; GO:0019538,protein metabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0036503,ERAD pathway; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901698,response to nitrogen compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0005783,endoplasmic reticulum; GO:0012505,endomembrane system; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0140534,endoplasmic reticulum protein-containing complex; GO:0031974,membrane-enclosed lumen; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0140513,nuclear protein-containing complex; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0097708,intracellular vesicle","PF00012.23:Hsp70 protein","--","--","--"]
["MS15G04790",39.155,29.7572,27.6868,2.2134,8.3378,2.6724,3.5385,6.7906,4.4398,13.5103,5.976,4.9814,4.2207,2.4455,6.3835,1064,806,737,44,198,61,73,131,109,298,139,137,90,52,136,-1.778118575,"2.32728E-06","1.13375E-05","down",-2.599731427,"5.26727E-17","6.30131E-16","down",-2.629076479,"2.18998E-08","1.09595E-07","down",-2.429151837,"4.56122E-18","5.41054E-17","down",-0.633915271,0.153189738,0.273869198,false,0.188460963,0.63265108,0.782521492,false,0.194907524,0.716980824,0.927996338,false,-0.829476986,0.152710092,0.309951479,false,0.001416306,0.99795988,0.999366016,false,"chr_0015",7396509,7399320,"-","MS15G04790","--","--","--","hypothetical protein DVH24_033600 [Malus domestica]","STR6_ARATH RecName: Full=Rhodanese-like domain-containing protein 6; AltName: Full=Sulfurtransferase 6; Short=AtStr6;","A0A498JF88_MALDO RecName: Full=FSH1 domain-containing protein {ECO:0000259|Pfam:PF03959};","Phospholipase/carboxyhydrolase","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0016787,hydrolase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF03959.16:Serine hydrolase (FSH1)","--","--","--"]
["MS15G05580",3.751,3.4566,4.4674,1.2154,0.7154,1.1908,1.0064,0.9198,1.061,0.89,1.5744,0.9746,0.6551,0.5326,0.8151,270,248,315,64,45,72,55,47,69,52,97,71,37,30,46,-1.583954634,"3.52386E-10","3.06907E-09","down",-2.248946515,"7.35895E-20","1.10056E-18","down",-1.697563714,"3.96793E-11","2.83351E-10","down",-1.680594804,"1.79547E-14","1.61084E-13","down",-0.086381669,0.782744153,0.863749142,false,0.583586621,0.061606455,0.166944324,false,0.015679081,0.959114338,0.989317131,false,-0.098784754,0.778008098,0.878531227,false,0.576241549,0.095745788,0.316503531,false,"chr_0015",8929917,8939522,"+","MS15G05580","--","K06630 14-3-3 protein epsilon | (RefSeq) 14-3-3 protein 7-like (A)","--","hypothetical protein C1H46_016525 [Malus baccata]","14337_SOLLC RecName: Full=14-3-3 protein 7;","A0A540MGE5_MALBA RecName: Full=14_3_3 domain-containing protein {ECO:0000259|SMART:SM00101};","Multifunctional chaperone (14-3-3 family)","GO:0005737,cytoplasm; GO:0008104,protein localization; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0033036,macromolecule localization; GO:0051179,localization; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0007154,cell communication; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF00244.23:14-3-3 protein","--","--","--"]
["MS15G06800",0.9782,0.9533,1.1698,0.4585,0.3198,0.6322,0.0736,0.1968,0.2165,1.1363,1.2734,0.7732,0.3562,0.75,0.4278,35,34,41,12,10,19,2,5,7,33,39,28,10,21,12,0.218141999,0.547103678,0.641336856,false,-0.724134883,0.103607938,0.151244636,false,-0.930365146,0.035736422,0.059408542,false,-2.379082548,"4.237E-05",0.00012479,"down",-2.588852865,"2.10112E-05",0.000144865,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.137039498,0.017904887,0.063446015,false,"NA","NA","NA","NA","chr_0015",11346412,11348233,"+","MS15G06800","--","--","--","uncharacterized protein LOC103441591 [Malus domestica]","--","A0A498JC14_MALDO RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};","--","--","--","C2H2","TF","C2H2"]
["MS15G07340",108.1915,117.3735,123.8578,13.7918,12.6261,23.7158,9.3874,7.9828,17.7729,21.8976,29.1922,26.3858,18.0551,29.4081,18.509,2520,2725,2826,235,257,464,166,132,374,414,582,622,330,536,338,-1.989140531,"1.90826E-50","2.68528E-48","down",-2.113819302,"2.67927E-25","5.83611E-24","down",-2.598270339,"3.1337E-28","9.65257E-27","down",-3.040702127,"2.03712E-30","5.25167E-29","down",-1.03686209,0.000450235,0.002168792,"down",-0.910059018,0.004848658,0.023883396,false,-0.441253659,0.205208756,0.662918261,false,-0.593073887,0.02008922,0.069266693,false,-0.46053153,0.117044745,0.354341428,false,"chr_0015",12589662,12592302,"-","MS15G07340","--","K03542 photosystem II 22kDa protein | (RefSeq) photosystem II 22 kDa protein, chloroplastic (A)","ko00195: Photosynthesis; ko01100: Metabolic pathways","photosystem II 22 kDa protein, chloroplastic [Malus domestica]","PSBS_SPIOL RecName: Full=Photosystem II 22 kDa protein, chloroplastic; AltName: Full=CP22; Flags: Precursor;","A0A498J700_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH90966.1};","--","GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0009523,photosystem II; GO:0042802,identical protein binding; GO:0051219,phosphoprotein binding; GO:0015979,photosynthesis; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0044237,cellular metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane; GO:0009521,photosystem; GO:0032991,protein-containing complex; GO:0098796,membrane protein complex","PF00504.24:Chlorophyll A-B binding protein","--","--","--"]
["MS15G09800",2.3467,4.8539,4.7024,1.9801,1.2929,1.8969,1.4119,1.1018,2.2126,0.9994,1.6585,0.916,0.9599,1.8512,0.739,81,167,159,50,39,55,37,27,69,28,49,32,26,50,20,-1.555575814,"4.30822E-05",0.000164998,"down",-1.450461787,0.000463985,0.00116507,"down",-0.992741228,0.006057231,0.012134832,false,-1.048017212,0.005788764,0.011589995,"down",0.519095694,0.208986819,0.345400532,false,0.417500707,0.360222031,0.556801892,false,-0.052764503,0.886792158,0.97383044,false,0.576893912,0.130074612,0.277417582,false,0.482935012,0.258621316,0.548308155,false,"chr_0015",20215448,20218266,"+","MS15G09800","--","K19893 glucan endo-1,3-beta-glucosidase 5/6 [EC:3.2.1.39] | (RefSeq) glucan endo-1,3-beta-glucosidase 5 (A)","ko00500: Starch and sucrose metabolism; ko01100: Metabolic pathways","glucan endo-1,3-beta-glucosidase 5 [Malus domestica]","E135_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 5; EC=3.2.1.39; AltName: Full=(1->3)-beta-glucan endohydrolase 5; Short=(1->3)-beta-glucanase 5; AltName: Full=Beta-1,3-endoglucanase 5; Short=Beta-1,3-glucanase 5; Flags: Precursor;","A0A540KHI4_MALBA RecName: Full=Glucan endo-1,3-beta-D-glucosidase {ECO:0000256|ARBA:ARBA00012780}; EC=3.2.1.39 {ECO:0000256|ARBA:ARBA00012780}; AltName: Full=(1->3)-beta-glucan endohydrolase {ECO:0000256|ARBA:ARBA00033335}; AltName: Full=Beta-1,3-endoglucanase {ECO:0000256|ARBA:ARBA00033417};","--","GO:0031225,anchored component of membrane; GO:0046658,anchored component of plasma membrane; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0005773,vacuole; GO:0042973,glucan endo-1,3-beta-D-glucosidase activity; GO:0005975,carbohydrate metabolic process; GO:0006952,defense response; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0008422,beta-glucosidase activity; GO:0015926,glucosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0031226,intrinsic component of plasma membrane; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00332.21:Glycosyl hydrolases family 17","--","--","--"]
["MS15G10970",6.817,8.8719,10.8767,2.6392,1.9093,2.9228,2.0093,1.578,1.1872,4.8453,4.9846,5.6759,3.3717,4.2036,3.0098,286,371,447,81,70,103,64,47,45,165,179,241,111,138,99,-0.585399145,0.006094535,0.014168798,false,-1.031113083,"9.88005E-06","3.31923E-05","down",-1.619593078,"2.636E-10","1.70576E-09","down",-2.188654883,"2.35746E-14","2.0992E-13","down",-1.59296712,"4.5017E-09","6.57795E-08","down",-1.14421355,0.000141886,0.001311864,"down",-0.571026602,0.075844801,0.479515734,false,-1.017330192,"9.11402E-06",0.000114478,"down",-0.563614171,0.030316694,0.153885436,false,"chr_0015",22055270,22059874,"-","MS15G10970","--","K00103 L-gulonolactone oxidase [EC:1.1.3.8] | (RefSeq) L-gulonolactone oxidase 3 (A)","ko00053: Ascorbate and aldarate metabolism; ko01100: Metabolic pathways; ko01240: Biosynthesis of cofactors","hypothetical protein DVH24_020857 [Malus domestica]","GGLO3_ARATH RecName: Full=L-gulonolactone oxidase 3 {ECO:0000303|PubMed:20622436}; Short=AtGulLO3 {ECO:0000303|PubMed:20622436}; EC=1.1.3.8 {ECO:0000269|PubMed:20622436}; Flags: Precursor;","A0A498JCI5_MALDO RecName: Full=ER membrane protein complex subunit 1 {ECO:0000256|ARBA:ARBA00020824}; EC=1.1.3.8 {ECO:0000256|ARBA:ARBA00013121};","D-arabinono-1, 4-lactone oxidase","GO:0016020,membrane; GO:0005773,vacuole; GO:0003885,D-arabinono-1,4-lactone oxidase activity; GO:0071949,FAD binding; GO:0050105,L-gulonolactone oxidase activity; GO:0016491,oxidoreductase activity; GO:0019853,L-ascorbic acid biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016614,oxidoreductase activity, acting on CH-OH group of donors; GO:0016899,oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0050660,flavin adenine dinucleotide binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005975,carbohydrate metabolic process; GO:0005996,monosaccharide metabolic process; GO:0006082,organic acid metabolic process; GO:0006766,vitamin metabolic process; GO:0006767,water-soluble vitamin metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009110,vitamin biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0019852,L-ascorbic acid metabolic process; GO:0042364,water-soluble vitamin biosynthetic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046364,monosaccharide biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:1901334,lactone metabolic process; GO:1901336,lactone biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01565.26:FAD binding domain","--","--","--"]
["MS15G11880",7.6577,8.1073,9.0763,1.6356,1.2639,1.4244,1.3093,1.1668,1.4874,3.0842,4.1076,3.8923,2.1112,2.6347,1.62,416,439,483,65,60,65,54,45,73,136,191,214,90,112,69,-0.978134353,"3.75456E-09","2.84126E-08",false,-1.670032925,"5.16762E-15","5.17405E-14","down",-2.311908343,"2.0404E-30","7.23517E-29","down",-2.360635862,"4.00882E-32","1.14896E-30","down",-1.369841512,"4.65768E-09","6.78492E-08","down",-0.67745655,0.019405696,0.070674928,false,-0.053399865,0.846986149,0.964212599,false,-1.315108007,"2.96209E-08","7.11378E-07","down",-0.614615639,0.033631725,0.164613131,false,"chr_0015",23422500,23425872,"-","MS15G11880","--","--","--","uncharacterized protein LOC126631606 isoform X1 [Malus sylvestris]","--","A0A540MFI4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97500.1};","--","--","PF04784.17:Protein of unknown function, DUF547","--","--","--"]
["MS15G12830",7.7239,7.1501,6.0946,0.204,0.5551,0.4886,0.4423,0.0526,0.3717,3.4018,6.7569,5.5303,1.8545,2.2889,1.6658,207,191,160,4,13,11,9,1,9,74,155,150,39,48,35,-0.242767138,0.367622568,0.467111602,false,-1.562207163,"1.19534E-09","6.88511E-09","down",-3.831372877,"4.43914E-23","9.69385E-22","down",-4.286607458,"2.13072E-22","3.3916E-21","down",-4.036755939,"4.99372E-15","1.61746E-13","down",-2.71768083,"1.06153E-06","1.93008E-05","down","NA","NA","NA","NA",-3.575213588,"5.57172E-15","4.50611E-13","down",-2.247835086,"3.24653E-06",0.000131368,"down","chr_0015",24800627,24802578,"-","MS15G12830","--","--","--","uncharacterized protein LOC126633035 [Malus sylvestris]","RSS3_ORYSJ RecName: Full=Protein RICE SALT SENSITIVE 3 {ECO:0000303|PubMed:23715469};","A0A498J853_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH91650.1};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF14215.9:bHLH-MYC and R2R3-MYB transcription factors N-terminal","--","--","--"]
["MS15G12900",427.4537,383.3734,583.5068,53.6373,14.8446,41.3739,16.8762,16.694,43.963,35.7128,39.1056,31.1742,25.512,33.7703,21.8574,2669,2386,3569,245,81,217,80,74,248,181,209,197,125,165,107,-3.528961915,"2.17916E-70","7.23556E-68","down",-3.80685714,"3.50781E-67","4.88727E-65","down",-3.461321295,"5.61063E-19","8.70407E-18","down",-3.896173527,"4.13059E-30","1.04494E-28","down",-0.354435887,0.35017892,0.503068953,false,-0.070984426,0.85520625,0.921721551,false,-0.431684745,0.388143089,0.800144872,false,0.079401782,0.845741903,0.917704805,false,0.367022965,0.377894279,0.662602632,false,"chr_0015",24931452,24931814,"-","MS15G12900","--","--","--","hypothetical protein C1H46_015171, partial [Malus baccata]","--","A0A540MKD4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD99257.1}; Flags: Fragment;","--","--","--","--","--","--"]
["MS15G13970",3.1298,2.8318,3.1362,0,0.022,0.2057,0.0759,0.2975,0.0213,0.6387,1.7722,0.664,0.1468,0.319,0.3429,163,147,160,0,1,9,3,11,1,27,79,35,6,13,14,-1.396853255,0.000289627,0.000933591,"down",-3.201944708,"8.15954E-20","1.21721E-18","down",-5.079650288,"1.9357E-18","2.85467E-17","down",-4.309706435,"3.27838E-16","3.39477E-15","down",-2.858697928,0.000380287,0.001870875,"down","NA","NA","NA","NA","NA","NA","NA","NA",-3.710146876,"3.54459E-05",0.000371156,"down","NA","NA","NA","NA","chr_0015",26449014,26452491,"+","MS15G13970","--","K09285 AP2-like factor, ANT lineage | (RefSeq) AP2-like ethylene-responsive transcription factor ANT (A)","--","hypothetical protein DVH24_020557 [Malus domestica]","ANT_ARATH RecName: Full=AP2-like ethylene-responsive transcription factor ANT {ECO:0000303|PubMed:8742706, ECO:0000303|PubMed:8742707}; AltName: Full=Complementing a protein kinase C mutant protein 1; AltName: Full=Protein AINTEGUMENTA {ECO:0000303|PubMed:8742706, ECO:0000303|PubMed:8742707}; AltName: Full=Protein DRAGON; AltName: Full=Protein OVULE MUTANT {ECO:0000303|PubMed:12271029};","A0A498JBQ4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH91534.1};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0030154,cell differentiation; GO:0051301,cell division; GO:0009908,flower development; GO:0019760,glucosinolate metabolic process; GO:0010492,maintenance of shoot apical meristem identity; GO:0010601,positive regulation of auxin biosynthetic process; GO:0042127,regulation of cell population proliferation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0006082,organic acid metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016143,S-glycoside metabolic process; GO:0019748,secondary metabolic process; GO:0019757,glycosinolate metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901657,glycosyl compound metabolic process; GO:0009888,tissue development; GO:0010073,meristem maintenance; GO:0010074,maintenance of meristem identity; GO:0019827,stem cell population maintenance; GO:0048507,meristem development; GO:0098727,maintenance of cell number; GO:0009058,biosynthetic process; GO:0009850,auxin metabolic process; GO:0009851,auxin biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009891,positive regulation of biosynthetic process; GO:0009893,positive regulation of metabolic process; GO:0010600,regulation of auxin biosynthetic process; GO:0010817,regulation of hormone levels; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031325,positive regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031328,positive regulation of cellular biosynthetic process; GO:0032350,regulation of hormone metabolic process; GO:0032352,positive regulation of hormone metabolic process; GO:0042445,hormone metabolic process; GO:0042446,hormone biosynthetic process; GO:0044249,cellular biosynthetic process; GO:0046885,regulation of hormone biosynthetic process; GO:0046886,positive regulation of hormone biosynthetic process; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0090354,regulation of auxin metabolic process; GO:0090355,positive regulation of auxin metabolic process; GO:0008283,cell population proliferation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00847.23:AP2 domain","AP2/ERF-AP2","TF","AP2/ERF->AP2/ERF-AP2"]
["MS15G14830",38.3409,28.7814,21.55,2.3431,15.0719,4.6182,4.2778,5.4643,5.3922,15.671,3.5835,6.7745,4.8285,7.2631,11.6217,425,318,234,19,146,43,36,43,54,141,34,76,42,63,101,-1.560747952,0.001244138,0.003438601,"down",-1.621821961,"1.82656E-06","6.85878E-06","down",-1.768407635,0.002237184,0.004896521,"down",-2.274824073,"3.05575E-14","2.6904E-13","down",-0.696285635,0.188971018,0.320376648,false,-0.63690369,0.089432024,0.218221708,false,-0.515863354,0.409349197,0.809481065,false,-0.18344445,0.799368296,0.890602764,false,-0.114908384,0.855633567,0.946953532,false,"chr_0015",27440027,27440500,"+","MS15G14830","--","K13993 HSP20 family protein | (RefSeq) 17.9 kDa class II heat shock protein-like isoform X1 (A)","ko04141: Protein processing in endoplasmic reticulum","17.9 kDa class II heat shock protein-like isoform X1 [Malus domestica]","HSP21_SOYBN RecName: Full=17.9 kDa class II heat shock protein;","A0A5N5HWS5_9ROSA SubName: Full=17.3 kDa class II heat shock protein-like {ECO:0000313|EMBL:KAB2627834.1};","Molecular chaperone (small heat-shock protein Hsp26/Hsp42)","GO:0005737,cytoplasm; GO:0043621,protein self-association; GO:0051082,unfolded protein binding; GO:0051259,protein complex oligomerization; GO:0006457,protein folding; GO:0009408,response to heat; GO:0042542,response to hydrogen peroxide; GO:0009651,response to salt stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0000302,response to reactive oxygen species; GO:0006979,response to oxidative stress; GO:0010035,response to inorganic substance; GO:0042221,response to chemical; GO:1901700,response to oxygen-containing compound; GO:0006970,response to osmotic stress; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF00011.24:Hsp20/alpha crystallin family","--","--","--"]
["MS15G16160",141.6407,135.3333,125.7753,56.8235,41.68,66.8891,39.3598,38.1081,50.9894,72.0327,96.0941,76.4226,94.0068,100.4102,78.0964,4157,3959,3616,1220,1069,1649,877,794,1352,1716,2414,2270,2165,2306,1797,-0.538754696,0.000171188,0.000583415,false,-0.271606987,0.069384894,0.106474524,false,-1.079446414,"8.23412E-09","4.38045E-08","down",-1.371343908,"2.29874E-19","3.00473E-18","down",-0.819827667,"1.98478E-06","1.73529E-05",false,-1.083460043,"6.24951E-10","2.34023E-08","down",-0.291280186,0.150702017,0.604607338,false,-0.525776969,0.008450084,0.035254633,false,-0.783559114,"7.81539E-05",0.001805224,false,"chr_0015",28902830,28904169,"-","MS15G16160","--","K12130 pseudo-response regulator 5 | (RefSeq) two-component response regulator-like APRR3 (A)","ko04712: Circadian rhythm - plant","zinc finger protein CONSTANS-LIKE 4-like [Malus domestica]","COL4_ARATH RecName: Full=Zinc finger protein CONSTANS-LIKE 4;","Q9ZTK7_MALDO SubName: Full=COL domain class transcription factor {ECO:0000313|EMBL:ADL36664.1}; SubName: Full=CONSTANS-like 2 {ECO:0000313|EMBL:ACD69428.1}; SubName: Full=CONSTANS-like protein 2 {ECO:0000313|EMBL:AAC99310.1};","GATA-4/5/6 transcription factors","GO:0005634,nucleus; GO:0008270,zinc ion binding; GO:0009909,regulation of flower development; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009791,post-embryonic development; GO:0009908,flower development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048580,regulation of post-embryonic development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048831,regulation of shoot system development; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0051239,regulation of multicellular organismal process; GO:0061458,reproductive system development; GO:0065007,biological regulation; GO:0090567,reproductive shoot system development; GO:2000026,regulation of multicellular organismal development; GO:2000241,regulation of reproductive process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF06203.17:CCT motif","C2C2-CO-like","TF","C2C2->C2C2-CO-like"]
["MS15G16840",2.4968,1.2348,1.759,0.1923,0.6841,0.0419,0.0463,0.0495,0.1168,0.3466,0.0822,0,0,0.1348,0,71,35,49,4,17,1,1,1,3,8,2,0,0,3,0,-3.532036631,"5.93056E-06","2.69042E-05","down",-5.061897125,"1.66784E-07","7.24987E-07","down",-2.320891522,0.00223707,0.004896521,"down",-4.366513962,"4.78654E-08","2.14457E-07","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0015",30053841,30055447,"+","MS15G16840","--","--","--","hypothetical protein DVH24_020272 [Malus domestica]","--","A0A498J671_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH91249.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF03350.19:Uncharacterized protein family, UPF0114","--","--","--"]
["MS15G17790",23.0067,25.1549,32.2664,11.1756,9.7377,12.3378,8.0463,8.0483,11.5048,15.3888,19.8127,18.6782,11.0769,12.4673,13.5675,757,825,1040,269,280,341,201,188,342,411,558,622,286,321,350,-0.391476553,0.022969618,0.045197442,false,-0.821275048,"1.90036E-06","7.10967E-06",false,-1.060274663,"8.21325E-09","4.37091E-08","down",-1.260083631,"5.92964E-10","3.38853E-09","down",-0.855168696,"1.33159E-05","9.576E-05",false,-0.421790954,0.034673945,0.110187642,false,-0.199996136,0.328958526,0.766191398,false,-0.652614707,"7.46483E-05",0.000710135,false,-0.214030289,0.200249054,0.478247988,false,"chr_0015",30931612,30934393,"+","MS15G17790","--","K10572 inositol-pentakisphosphate 2-kinase [EC:2.7.1.158] | (RefSeq) inositol-pentakisphosphate 2-kinase-like isoform X2 (A)","ko00562: Inositol phosphate metabolism; ko01100: Metabolic pathways; ko04070: Phosphatidylinositol signaling system","inositol-pentakisphosphate 2-kinase-like isoform X1 [Malus domestica]","IPPK_ARATH RecName: Full=Inositol-pentakisphosphate 2-kinase; EC=2.7.1.158; AltName: Full=Inositol-1,3,4,5,6-pentakisphosphate 2-kinase; AltName: Full=Ins(1,3,4,5,6)P5 2-kinase; Short=AtIPK1; Short=InsP5 2-kinase;","A0A540MC15_MALBA RecName: Full=Inositol-pentakisphosphate 2-kinase {ECO:0000256|ARBA:ARBA00012023, ECO:0000256|RuleBase:RU364126}; EC=2.7.1.158 {ECO:0000256|ARBA:ARBA00012023, ECO:0000256|RuleBase:RU364126};","Inositol polyphosphate kinase","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0005524,ATP binding; GO:0035299,inositol pentakisphosphate 2-kinase activity; GO:0032942,inositol tetrakisphosphate 2-kinase activity; GO:0046872,metal ion binding; GO:0030643,cellular phosphate ion homeostasis; GO:0042742,defense response to bacterium; GO:0050832,defense response to fungus; GO:0051607,defense response to virus; GO:0032958,inositol phosphate biosynthetic process; GO:0052746,inositol phosphorylation; GO:0048527,lateral root development; GO:0010264,myo-inositol hexakisphosphate biosynthetic process; GO:0055062,phosphate ion homeostasis; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0051765,inositol tetrakisphosphate kinase activity; GO:0043169,cation binding; GO:0006873,cellular ion homeostasis; GO:0008150,biological_process; GO:0009987,cellular process; GO:0019725,cellular homeostasis; GO:0030002,cellular anion homeostasis; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055081,anion homeostasis; GO:0055082,cellular chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0072502,cellular trivalent inorganic anion homeostasis; GO:0072506,trivalent inorganic anion homeostasis; GO:0098771,inorganic ion homeostasis; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0009620,response to fungus; GO:0009615,response to virus; GO:0140546,defense response to symbiont; GO:0006066,alcohol metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0019751,polyol metabolic process; GO:0043647,inositol phosphate metabolic process; GO:0044237,cellular metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046165,alcohol biosynthetic process; GO:0046173,polyol biosynthetic process; GO:0071704,organic substance metabolic process; GO:0090407,organophosphate biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0006020,inositol metabolic process; GO:0016310,phosphorylation; GO:0044238,primary metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0046835,carbohydrate phosphorylation; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048364,root development; GO:0048528,post-embryonic root development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0090696,post-embryonic plant organ development; GO:0099402,plant organ development; GO:0033517,myo-inositol hexakisphosphate metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF06090.15:Inositol-pentakisphosphate 2-kinase","--","--","--"]
["MS15G18670",75.4977,90.0802,72.7172,19.9829,29.7013,15.5803,18.7748,29.3724,30.5857,47.741,32.8793,30.2567,26.2944,23.7593,38.9648,2071,2463,1954,401,712,359,391,572,758,1063,772,840,566,510,838,-0.908694535,"7.62656E-05",0.000278616,false,-1.131447247,"7.88679E-08","3.59328E-07","down",-1.640393465,"4.19035E-09","2.32818E-08","down",-1.319895283,"9.63334E-10","5.35786E-09","down",-0.396163631,0.148508017,0.267316312,false,-0.171048119,0.508007449,0.688881276,false,0.317298535,0.321807922,0.759520885,false,-0.711743488,0.02793947,0.089031165,false,-0.481196237,0.124067711,0.36650419,false,"chr_0015",32176764,32179123,"+","MS15G18670","--","--","--","thaumatin-like protein 1b isoform X1 [Malus sylvestris]","TLP1_PYRPY RecName: Full=Thaumatin-like protein 1; Flags: Precursor;","A0A540NAS2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE07580.1};","--","GO:0005576,extracellular region; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00314.20:Thaumatin family","--","--","--"]
["MS15G19360",5.4264,9.2073,7.7094,3.2816,11.2172,3.0068,3.0303,5.5302,1.9929,14.4488,7.742,7.4372,5.1944,6.1357,10.1428,217,367,302,96,392,101,92,157,72,469,265,301,163,192,318,0.609934423,0.065505559,0.11136548,false,0.232119348,0.426717822,0.508323212,false,-0.106328121,0.833380908,0.868059481,false,-0.787146806,0.041517922,0.06815794,false,-1.384003694,0.001365536,0.005685098,"down",-1.00614328,0.011938454,0.048825535,"down",-0.689256749,0.232131696,0.6889252,false,-0.693304527,0.194593068,0.365579976,false,-0.306713535,0.550555585,0.790472055,false,"chr_0015",32714409,32717118,"-","MS15G19360","--","K26385 lysine histidine transporter | (RefSeq) lysine histidine transporter-like 8 (A)","--","lysine histidine transporter-like 8 [Malus sylvestris]","LHTL8_ARATH RecName: Full=Lysine histidine transporter-like 8; AltName: Full=Amino acid transporter-like protein 1;","A0A498J5U5_MALDO RecName: Full=Aa_trans domain-containing protein {ECO:0000259|Pfam:PF01490};","Amino acid transporters","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0005886,plasma membrane; GO:0015171,amino acid transmembrane transporter activity; GO:0003333,amino acid transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005342,organic acid transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0046943,carboxylic acid transmembrane transporter activity; GO:0006810,transport; GO:0006865,amino acid transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015849,organic acid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:1903825,organic acid transmembrane transport; GO:1905039,carboxylic acid transmembrane transport; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF01490.21:Transmembrane amino acid transporter protein","--","--","--"]
["MS16G00360",14.3485,13.2787,11.5295,1.327,2.4114,3.2416,1.1539,1.701,1.7297,7.9926,10.152,7.8373,4.5562,8.079,5.7078,606,559,477,41,89,115,37,51,66,274,367,335,151,267,189,-0.411022834,0.020317894,0.040689488,false,-0.80747515,0.000475234,0.001191696,false,-2.277747812,"4.89279E-14","4.78767E-13","down",-2.814974526,"7.80889E-34","2.44799E-32","down",-2.390878558,"7.66893E-23","5.65828E-21","down",-1.992208806,"2.53452E-11","1.27077E-09","down",-0.537348179,0.163889169,0.618528288,false,-1.850957774,"4.00772E-09","1.18016E-07","down",-1.445744832,"4.14513E-05",0.001086634,"down","chr_0016",376556,378881,"+","MS16G00360","--","--","--","hypothetical protein DVH24_023418 [Malus domestica]","--","A0A498I4M9_MALDO RecName: Full=LysM domain-containing protein {ECO:0000259|PROSITE:PS51782};","--","GO:0005886,plasma membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity","PF01476.23:LysM domain","--","--","--"]
["MS16G01760",0.85,0.8233,0.5685,0.0401,0.2683,0.1745,0.4633,0.289,0.1622,0.3972,1.2669,0.3765,0.3361,0.7865,0.6355,29,28,19,1,8,5,12,7,5,11,37,13,9,21,17,0.024898702,0.965506222,0.97580883,false,-0.066812706,0.891590618,0.917049556,false,-1.968137787,0.004399446,0.009061118,"down",-1.022528972,0.083538763,0.126457237,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0016",1711372,1720872,"-","MS16G01760","--","--","--","protein SAR DEFICIENT 1-like [Malus sylvestris]","SARD1_ARATH RecName: Full=Protein SAR DEFICIENT 1 {ECO:0000303|PubMed:20921422};","A0A540LWL5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD90652.1};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0043565,sequence-specific DNA binding; GO:0071219,cellular response to molecule of bacterial origin; GO:0042742,defense response to bacterium; GO:0002229,defense response to oomycetes; GO:0009626,plant-type hypersensitive response; GO:1900426,positive regulation of defense response to bacterium; GO:0080142,regulation of salicylic acid biosynthetic process; GO:0010112,regulation of systemic acquired resistance; GO:0006355,regulation of DNA-templated transcription; GO:0009617,response to bacterium; GO:0010224,response to UV-B; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0002237,response to molecule of bacterial origin; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0051716,cellular response to stimulus; GO:0071216,cellular response to biotic stimulus; GO:0006950,response to stress; GO:0006952,defense response; GO:0098542,defense response to other organism; GO:0002239,response to oomycetes; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0012501,programmed cell death; GO:0033554,cellular response to stress; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0002831,regulation of response to biotic stimulus; GO:0002833,positive regulation of response to biotic stimulus; GO:0031347,regulation of defense response; GO:0031349,positive regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0032103,positive regulation of response to external stimulus; GO:0048518,positive regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:1900424,regulation of defense response to bacterium; GO:0006082,organic acid metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009696,salicylic acid metabolic process; GO:0009697,salicylic acid biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010337,regulation of salicylic acid metabolic process; GO:0010565,regulation of cellular ketone metabolic process; GO:0016053,organic acid biosynthetic process; GO:0018958,phenol-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042180,cellular ketone metabolic process; GO:0042537,benzene-containing compound metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046189,phenol-containing compound biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0050794,regulation of cellular process; GO:0062012,regulation of small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0072330,monocarboxylic acid biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0009627,systemic acquired resistance; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006807,nitrogen compound metabolic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0009314,response to radiation; GO:0009411,response to UV; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF07887.14:Calmodulin binding protein-like N-terminal domain","--","--","--"]
["MS16G01880",23.5693,18.1398,15.0206,50.2609,45.3103,34.6729,50.0711,68.6287,84.5998,52.0591,43.0739,41.4861,56.6819,44.3626,54.885,700,537,437,1092,1176,865,1129,1447,2270,1255,1095,1247,1321,1031,1278,1.456155932,"6.52404E-11","6.22914E-10","up",1.748281463,"1.65696E-16","1.89696E-15","up",1.416492121,"2.28931E-08","1.14354E-07","up",2.113296881,"7.37679E-18","8.60964E-17","up",0.672852565,0.00282476,0.010578793,false,0.383024192,0.076295667,0.194288212,false,0.697289015,0.006011002,0.156783551,false,-0.021414941,0.924584392,0.96139843,false,-0.306389332,0.159093915,0.421583664,false,"chr_0016",1888654,1890218,"-","MS16G01880","--","K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB62-like (A)","--","transcription factor MYB62-like [Malus domestica]","MYB62_ARATH RecName: Full=Transcription factor MYB62 {ECO:0000303|PubMed:9839469}; AltName: Full=Myb-related protein 62 {ECO:0000303|PubMed:9839469}; Short=AtMYB62 {ECO:0000303|PubMed:9839469};","A0A540LVW0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD90643.1};","Transcription factor, Myb superfamily","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0043565,sequence-specific DNA binding; GO:0016036,cellular response to phosphate starvation; GO:0009740,gibberellic acid mediated signaling pathway; GO:0009686,gibberellin biosynthetic process; GO:0010373,negative regulation of gibberellin biosynthetic process; GO:0045892,negative regulation of DNA-templated transcription; GO:0055062,phosphate ion homeostasis; GO:0006355,regulation of DNA-templated transcription; GO:0010015,root morphogenesis; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006950,response to stress; GO:0007154,cell communication; GO:0008150,biological_process; GO:0009267,cellular response to starvation; GO:0009605,response to external stimulus; GO:0009987,cellular process; GO:0009991,response to extracellular stimulus; GO:0031667,response to nutrient levels; GO:0031668,cellular response to extracellular stimulus; GO:0031669,cellular response to nutrient levels; GO:0033554,cellular response to stress; GO:0042594,response to starvation; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071496,cellular response to external stimulus; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009739,response to gibberellin; GO:0009755,hormone-mediated signaling pathway; GO:0010033,response to organic substance; GO:0010476,gibberellin mediated signaling pathway; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006082,organic acid metabolic process; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009685,gibberellin metabolic process; GO:0016053,organic acid biosynthetic process; GO:0016101,diterpenoid metabolic process; GO:0016102,diterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0009890,negative regulation of biosynthetic process; GO:0009892,negative regulation of metabolic process; GO:0010371,regulation of gibberellin biosynthetic process; GO:0010565,regulation of cellular ketone metabolic process; GO:0019216,regulation of lipid metabolic process; GO:0019222,regulation of metabolic process; GO:0019747,regulation of isoprenoid metabolic process; GO:0019748,secondary metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031324,negative regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0031327,negative regulation of cellular biosynthetic process; GO:0042180,cellular ketone metabolic process; GO:0043455,regulation of secondary metabolic process; GO:0045827,negative regulation of isoprenoid metabolic process; GO:0045833,negative regulation of lipid metabolic process; GO:0046890,regulation of lipid biosynthetic process; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0051055,negative regulation of lipid biosynthetic process; GO:0062012,regulation of small molecule metabolic process; GO:0062014,negative regulation of small molecule metabolic process; GO:0080090,regulation of primary metabolic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0010558,negative regulation of macromolecule biosynthetic process; GO:0010605,negative regulation of macromolecule metabolic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0045934,negative regulation of nucleobase-containing compound metabolic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051172,negative regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0051253,negative regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1902679,negative regulation of RNA biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:1903507,negative regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055081,anion homeostasis; GO:0065008,regulation of biological quality; GO:0072506,trivalent inorganic anion homeostasis; GO:0098771,inorganic ion homeostasis; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048364,root development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00249.34:Myb-like DNA-binding domain","MYB","TF","MYB->MYB"]
["MS16G02670",47.4584,59.5161,63.424,16.8023,14.1003,22.4761,12.1326,6.2296,9.6553,28.8958,43.7576,41.0458,34.4374,40.6146,34.6622,1556,1945,2037,403,404,619,302,145,286,769,1228,1362,886,1042,891,-0.401821897,0.030753359,0.058166444,false,-0.341019298,0.026527924,0.045455116,false,-1.466804725,"5.63998E-13","4.9337E-12","down",-2.319045299,"1.35948E-20","1.93053E-19","down",-1.906000669,"1.38098E-12","3.40226E-11","down",-1.963401377,"7.38307E-16","7.59523E-14","down",-0.854828852,0.002316746,0.092763506,false,-1.049392183,"2.04156E-06","3.09417E-05","down",-1.100898637,"8.61598E-09","7.9439E-07","down","chr_0016",2627789,2630365,"+","MS16G02670","--","--","--","calcium sensing receptor, chloroplastic [Malus domestica]","CAS_ARATH RecName: Full=Calcium sensing receptor, chloroplastic; AltName: Full=Sulfurtransferase 3; Short=AtStr3; Flags: Precursor;","A0A498I2I8_MALDO RecName: Full=Rhodanese domain-containing protein {ECO:0000259|PROSITE:PS50206};","--","GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0005739,mitochondrion; GO:0009536,plastid; GO:0009579,thylakoid; GO:0071277,cellular response to calcium ion; GO:0009704,de-etiolation; GO:0090333,regulation of stomatal closure; GO:0008150,biological_process; GO:0009987,cellular process; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051592,response to calcium ion; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0071241,cellular response to inorganic substance; GO:0071248,cellular response to metal ion; GO:0007275,multicellular organism development; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009639,response to red or far red light; GO:0009640,photomorphogenesis; GO:0009791,post-embryonic development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0010118,stomatal movement; GO:0010119,regulation of stomatal movement; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0090332,stomatal closure; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0009526,plastid envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane; GO:0031224,intrinsic component of membrane","PF00581.23:Rhodanese-like domain","--","--","--"]
["MS16G03710",43.9399,48.9809,14.866,74.9465,57.1196,54.9823,55.5483,44.464,32.051,34.1875,20.5863,23.898,53.2778,24.0961,35.0368,1566,1740,519,1954,1779,1646,1503,1125,1032,989,628,862,1490,672,979,-0.265007064,0.514767833,0.611656784,false,0.349805817,0.563919219,0.639355212,false,1.002518047,0.012206343,0.022769171,"up",0.574299551,0.155999699,0.217000563,false,0.853788286,0.003701085,0.013355314,false,0.239264961,0.454505642,0.643023243,false,-0.431186782,0.100008449,0.528624301,false,1.287177221,"9.42725E-07","1.56865E-05","up",0.67845033,0.025004497,0.135240777,false,"chr_0016",3422276,3424002,"-","MS16G03710","--","K24028 salicylic acid 3-hydroxylase [EC:1.14.11.-] | (RefSeq) protein DMR6-LIKE OXYGENASE 2-like (A)","--","probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Malus domestica]","JOX2_ARATH RecName: Full=Jasmonate-induced oxygenase 2 {ECO:0000303|PubMed:28559313}; EC=1.14.11.- {ECO:0000269|PubMed:28559313, ECO:0000269|PubMed:28760569, ECO:0000269|PubMed:33516967}; AltName: Full=2-oxoglutarate-dependent dioxygenase JOX2 {ECO:0000305}; AltName: Full=Jasmonic acid oxidase 2 {ECO:0000303|PubMed:28760569};","A0A498I8Q1_MALDO RecName: Full=Fe2OG dioxygenase domain-containing protein {ECO:0000259|PROSITE:PS51471};","Iron/ascorbate family oxidoreductases","GO:0005829,cytosol; GO:0051213,dioxygenase activity; GO:0005506,iron ion binding; GO:0120091,jasmonic acid hydrolase; GO:0097237,cellular response to toxic substance; GO:0006952,defense response; GO:1900366,negative regulation of defense response to insect; GO:1900150,regulation of defense response to fungus; GO:2000022,regulation of jasmonic acid mediated signaling pathway; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0016787,hydrolase activity; GO:0016810,hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; GO:0008150,biological_process; GO:0009636,response to toxic substance; GO:0009987,cellular process; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070887,cellular response to chemical stimulus; GO:0006950,response to stress; GO:0002213,defense response to insect; GO:0002831,regulation of response to biotic stimulus; GO:0002832,negative regulation of response to biotic stimulus; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0031347,regulation of defense response; GO:0031348,negative regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0032102,negative regulation of response to external stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0048519,negative regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0051707,response to other organism; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:0098542,defense response to other organism; GO:2000068,regulation of defense response to insect; GO:0009620,response to fungus; GO:0050832,defense response to fungus; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009753,response to jasmonic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009867,jasmonic acid mediated signaling pathway; GO:0009966,regulation of signal transduction; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0050794,regulation of cellular process; GO:0070542,response to fatty acid; GO:0071310,cellular response to organic substance; GO:0071395,cellular response to jasmonic acid stimulus; GO:0071396,cellular response to lipid; GO:0071398,cellular response to fatty acid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF14226.9:non-haem dioxygenase in morphine synthesis N-terminal","--","--","--"]
["MS16G04580",11.4802,9.5759,8.7812,1.6055,1.5711,3.5842,0.7844,1.3515,1.3,7.3978,10.7646,9.0714,4.5956,6.0037,5.3592,694,577,520,71,83,182,36,58,71,363,557,555,218,284,254,0.046941565,0.804096588,0.857086217,false,-0.614771107,0.000927182,0.002199515,false,-1.945891309,"1.75354E-09","1.02153E-08","down",-2.840101975,"1.7766E-29","4.32165E-28","down",-2.87349302,"7.20492E-29","8.31964E-27","down",-2.208854243,"1.07242E-17","1.49132E-15","down",-0.891438967,0.025783249,0.309129942,false,-1.977548374,"1.22627E-09","3.96921E-08","down",-1.306985972,"5.55795E-05",0.001369379,"down","chr_0016",4236396,4240635,"-","MS16G04580","--","--","--","protein IQ-DOMAIN 31-like isoform X2 [Malus domestica]","IQD31_ARATH RecName: Full=Protein IQ-DOMAIN 31 {ECO:0000303|PubMed:16368012}; Short=AtIQD31 {ECO:0000303|PubMed:16368012};","A0A498I6H3_MALDO RecName: Full=DUF4005 domain-containing protein {ECO:0000259|Pfam:PF13178};","--","GO:0005875,microtubule associated complex; GO:0005739,mitochondrion; GO:0005635,nuclear envelope; GO:0005886,plasma membrane; GO:0005516,calmodulin binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005856,cytoskeleton; GO:0015630,microtubule cytoskeleton; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005737,cytoplasm; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005634,nucleus; GO:0012505,endomembrane system; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0016020,membrane; GO:0071944,cell periphery","PF13178.9:Protein of unknown function (DUF4005)","--","--","--"]
["MS16G05520",17.8798,15.9936,12.2534,1.6237,6.5815,6.1029,1.1528,4.2269,1.7991,37.9706,51.2725,41.51,13.7031,32.9157,26.872,286,255,192,19,92,82,14,48,26,493,702,672,172,412,337,1.681774896,"1.68697E-16","2.92213E-15","up",0.953538773,0.002054121,0.00454102,false,-1.472402663,0.001161095,0.002687836,"down",-2.407813381,"1.72437E-08","8.21718E-08","down",-4.079171159,"1.70242E-25","1.58036E-23","down",-3.345892819,"2.8081E-13","1.95248E-11","down",-0.929848783,0.141312585,0.595989002,false,-3.134782621,"7.51796E-14","5.20979E-12","down",-2.398809164,"6.14031E-07","3.19319E-05","down","chr_0016",5146393,5148388,"-","MS16G05520","--","K14492 two-component response regulator ARR-A family | (RefSeq) two-component response regulator ARR5-like (A)","ko04075: Plant hormone signal transduction","two-component response regulator ARR5-like [Malus domestica]","ARR6_ARATH RecName: Full=Two-component response regulator ARR6;","A0A498JN28_MALDO RecName: Full=Response regulatory domain-containing protein {ECO:0000259|PROSITE:PS50110};","GATA-4/5/6 transcription factors","GO:0005634,nucleus; GO:0000156,phosphorelay response regulator activity; GO:0009736,cytokinin-activated signaling pathway; GO:0006355,regulation of DNA-templated transcription; GO:0009735,response to cytokinin; GO:0003674,molecular_function; GO:0060089,molecular transducer activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071368,cellular response to cytokinin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00072.27:Response regulator receiver domain","Others","TR","Others"]
["MS16G06430",10.0354,11.605,11.7404,0.8801,1.2957,2.511,0.3509,0.7819,0.3195,7.1117,21.6328,10.9028,4.2723,4.2276,4.8425,452,521,518,29,51,95,12,25,13,260,834,497,151,149,171,0.416108627,0.219877731,0.307128324,false,-1.029947199,"1.68429E-10","1.06506E-09","down",-2.626150785,"2.16757E-15","2.41719E-14","down",-4.264301508,"1.80713E-41","7.95298E-40","down",-4.653245692,"9.86453E-23","7.20339E-21","down",-3.213877583,"1.03458E-19","1.90866E-17","down",-1.61190478,0.003009714,0.106678504,false,-3.034487525,"2.90929E-11","1.31716E-09","down",-1.571451428,"8.8638E-06",0.000305201,"down","chr_0016",6216244,6220063,"+","MS16G06430","--","--","--","uncharacterized protein LOC103455200 [Malus domestica]","--","A0A498I6G0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH77665.1};","--","--","PF03080.18:Neprosin","--","--","--"]
["MS16G08030",1.2084,1.0168,0.955,0.3019,0.3271,0.5414,0.1883,0.5308,0.3452,0.2561,0.6527,0.2953,0.5464,0.083,0.3149,93,78,72,17,22,35,11,29,24,16,43,23,33,5,19,-1.232143483,0.001868108,0.004944864,"down",-1.45224372,0.005012977,0.010209495,"down",-1.23227617,0.000442236,0.001111692,"down",-1.30463427,0.001306551,0.002973686,"down",-0.057514978,0.91963809,0.951839664,false,0.169914265,0.803768048,0.891918887,false,-0.064224775,0.901679173,0.97682231,false,0.008468995,0.986963474,0.993473002,false,0.23973639,0.710175223,0.880468615,false,"chr_0016",8016655,8021244,"-","MS16G08030","--","K09518 DnaJ homolog subfamily B member 12 | (RefSeq) chaperone protein dnaJ 49-like (A)","ko04141: Protein processing in endoplasmic reticulum","hypothetical protein DVH24_039804 [Malus domestica]","DNJ49_ARATH RecName: Full=Chaperone protein dnaJ 49; Short=AtDjC49; Short=AtJ49;","A0A498I9P3_MALDO RecName: Full=J domain-containing protein {ECO:0000259|PROSITE:PS50076};","--","GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0030544,Hsp70 protein binding; GO:0071218,cellular response to misfolded protein; GO:0051085,chaperone cofactor-dependent protein refolding; GO:0030433,ubiquitin-dependent ERAD pathway; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0031072,heat shock protein binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0033554,cellular response to stress; GO:0035966,response to topologically incorrect protein; GO:0035967,cellular response to topologically incorrect protein; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0051788,response to misfolded protein; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0006457,protein folding; GO:0006458,'de novo' protein folding; GO:0051084,'de novo' post-translational protein folding; GO:0061077,chaperone-mediated protein folding; GO:0006508,proteolysis; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0010243,response to organonitrogen compound; GO:0010498,proteasomal protein catabolic process; GO:0019538,protein metabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0034976,response to endoplasmic reticulum stress; GO:0036503,ERAD pathway; GO:0043161,proteasome-mediated ubiquitin-dependent protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901698,response to nitrogen compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005783,endoplasmic reticulum; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098827,endoplasmic reticulum subcompartment; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF11926.11:Domain of unknown function (DUF3444)","--","--","--"]
["MS16G08970",35.392,29.3341,24.5896,39.9037,74.5034,42.3043,59.5914,80.0879,47.12,31.8497,30.7047,24.4836,53.3386,26.9423,38.6018,1484,1226,1010,1224,2730,1490,1897,2384,1785,1084,1102,1039,1755,884,1269,0.148615376,0.46614386,0.565244859,false,0.707020455,0.007948267,0.015456446,false,1.035803324,0.000606742,0.001486097,"up",1.353171784,"1.21807E-07","5.19462E-07","up",1.216154095,"1.18218E-06","1.08117E-05","up",0.660552424,0.026246306,0.089271635,false,0.310648952,0.350806788,0.778494237,false,0.906385272,0.002481351,0.013131637,false,0.358199514,0.293301654,0.585828554,false,"chr_0016",9228734,9231448,"+","MS16G08970","--","--","--","uncharacterized protein LOC103454870 [Malus domestica]","--","A0A498I8Q8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH77921.1};","--","--","PF07712.15:Stress up-regulated Nod 19","--","--","--"]
["MS16G09850",45.8433,35.7263,41.0473,76.4242,97.8366,105.0819,122.2899,104.5275,113.0245,42.6256,66.5542,69.2531,114.418,106.0622,86.5416,1904,1479,1670,2322,3551,3666,3856,3082,4241,1437,2366,2911,3729,3447,2818,0.719466954,0.000383826,0.001204592,false,1.61826287,"4.52299E-21","7.29632E-20","up",1.40081219,"2.07594E-14","2.1111E-13","up",1.754352309,"1.94095E-29","4.70222E-28","up",1.04652354,"1.81871E-07","1.98778E-06","up",0.150686038,0.365276209,0.561509513,false,0.349749382,0.046640539,0.39077132,false,0.698617445,0.001687613,0.009617801,false,-0.190876366,0.323979117,0.615451523,false,"chr_0016",11295162,11298668,"-","MS16G09850","--","K01761 methionine-gamma-lyase [EC:4.4.1.11] | (RefSeq) methionine gamma-lyase-like (A)","ko00270: Cysteine and methionine metabolism; ko00450: Selenocompound metabolism; ko01100: Metabolic pathways","methionine gamma-lyase-like [Malus sylvestris]","MGL_ARATH RecName: Full=Methionine gamma-lyase; Short=AtMGL; EC=4.4.1.11; AltName: Full=L-methioninase;","A0A5N5G575_9ROSA SubName: Full=Methionine gamma-lyase-like {ECO:0000313|EMBL:KAB2608931.1};","Cystathionine beta-lyases/cystathionine gamma-synthases","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0016846,carbon-sulfur lyase activity; GO:0004123,cystathionine gamma-lyase activity; GO:0018826,methionine gamma-lyase activity; GO:0030170,pyridoxal phosphate binding; GO:0009970,cellular response to sulfate starvation; GO:0042631,cellular response to water deprivation; GO:0019343,cysteine biosynthetic process via cystathionine; GO:0019458,methionine catabolic process via 2-oxobutanoate; GO:0051289,protein homotetramerization; GO:0019346,transsulfuration; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0005488,binding; GO:0019842,vitamin binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0070279,vitamin B6 binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006950,response to stress; GO:0007154,cell communication; GO:0008150,biological_process; GO:0009267,cellular response to starvation; GO:0009605,response to external stimulus; GO:0009987,cellular process; GO:0009991,response to extracellular stimulus; GO:0031667,response to nutrient levels; GO:0031668,cellular response to extracellular stimulus; GO:0031669,cellular response to nutrient levels; GO:0033554,cellular response to stress; GO:0042594,response to starvation; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071496,cellular response to external stimulus; GO:0001101,response to acid chemical; GO:0009414,response to water deprivation; GO:0009415,response to water; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:0042221,response to chemical; GO:0070887,cellular response to chemical stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071229,cellular response to acid chemical; GO:0071462,cellular response to water stimulus; GO:0104004,cellular response to environmental stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0000096,sulfur amino acid metabolic process; GO:0000097,sulfur amino acid biosynthetic process; GO:0006082,organic acid metabolic process; GO:0006520,cellular amino acid metabolic process; GO:0006534,cysteine metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0008652,cellular amino acid biosynthetic process; GO:0009058,biosynthetic process; GO:0009069,serine family amino acid metabolic process; GO:0009070,serine family amino acid biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019344,cysteine biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044272,sulfur compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901605,alpha-amino acid metabolic process; GO:1901607,alpha-amino acid biosynthetic process; GO:0000098,sulfur amino acid catabolic process; GO:0006555,methionine metabolic process; GO:0009056,catabolic process; GO:0009063,cellular amino acid catabolic process; GO:0009066,aspartate family amino acid metabolic process; GO:0009068,aspartate family amino acid catabolic process; GO:0009087,methionine catabolic process; GO:0016054,organic acid catabolic process; GO:0044248,cellular catabolic process; GO:0044273,sulfur compound catabolic process; GO:0044282,small molecule catabolic process; GO:0046395,carboxylic acid catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:1901606,alpha-amino acid catabolic process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0051259,protein complex oligomerization; GO:0051260,protein homooligomerization; GO:0051262,protein tetramerization; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0009092,homoserine metabolic process; GO:0050667,homocysteine metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity","PF01053.23:Cys/Met metabolism PLP-dependent enzyme","--","--","--"]
["MS16G11060",122.9,234.7004,207.4298,272.7482,216.8906,353.6556,227.97,87.0533,195.8888,228.7021,288.2602,320.971,218.7697,449.4374,264.3469,1575,2998,2604,2557,2429,3807,2218,792,2268,2379,3162,4163,2200,4507,2656,0.753351542,0.002272462,0.005879828,false,1.013880984,0.000669743,0.001634758,"up",0.78496943,0.003906169,0.0081477,false,0.135356215,0.698996375,0.759168449,false,-0.605491095,0.061369609,0.134990329,false,-0.863792511,0.016170412,0.061527622,false,-0.651829842,0.052785828,0.412591265,false,0.048085111,0.812726834,0.898468597,false,-0.204550822,0.474341134,0.739470616,false,"chr_0016",13260686,13261233,"+","MS16G11060","--","--","--","hypothetical protein DVH24_020009 [Malus domestica]","--","A0A498I6I9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH77121.1};","--","--","PF05743.16:UEV domain","--","--","--"]
["MS16G11890",4.4988,6.4738,6.7729,2.112,3.9,3.1377,1.4365,3.2645,1.6096,7.7818,7.0079,6.9147,7.2967,7.6656,4.8108,99,142,146,34,75,58,24,51,32,139,132,154,126,132,83,0.481173935,0.039997544,0.072884469,false,0.453400785,0.096623137,0.142370427,false,-0.728688168,0.02557572,0.044098315,false,-1.207953384,0.001476902,0.003336714,"down",-1.679149616,"3.15282E-06","2.64964E-05","down",-1.647104444,"1.91727E-05",0.000239317,"down",-0.478508731,0.291466033,0.737103818,false,-1.191060094,"8.2622E-05",0.000774312,"down",-1.154095955,0.000636809,0.009505147,"down","chr_0016",15558786,15559726,"+","MS16G11890","--","K16281 RING-H2 zinc finger protein RHA1 | (RefSeq) E3 ubiquitin-protein ligase RHA1B-like (A)","--","brassinosteroid-responsive RING protein 1-like [Malus sylvestris]","BRH1_ARATH RecName: Full=Brassinosteroid-responsive RING protein 1 {ECO:0000303|PubMed:12012249};","A0A540M9D1_MALBA RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};","FOG: Predicted E3 ubiquitin ligase","GO:0016021,integral component of membrane; GO:0061630,ubiquitin protein ligase activity; GO:0008270,zinc ion binding; GO:0009742,brassinosteroid mediated signaling pathway; GO:0016567,protein ubiquitination; GO:1901371,regulation of leaf morphogenesis; GO:1905421,regulation of plant organ morphogenesis; GO:0009741,response to brassinosteroid; GO:0010200,response to chitin; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004842,ubiquitin-protein transferase activity; GO:0016740,transferase activity; GO:0019787,ubiquitin-like protein transferase activity; GO:0061659,ubiquitin-like protein ligase activity; GO:0140096,catalytic activity, acting on a protein; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0014070,response to organic cyclic compound; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0043401,steroid hormone mediated signaling pathway; GO:0048545,response to steroid hormone; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071367,cellular response to brassinosteroid stimulus; GO:0071383,cellular response to steroid hormone stimulus; GO:0071396,cellular response to lipid; GO:0071407,cellular response to organic cyclic compound; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0032446,protein modification by small protein conjugation; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009965,leaf morphogenesis; GO:0010016,shoot system morphogenesis; GO:0022603,regulation of anatomical structure morphogenesis; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0099402,plant organ development; GO:1900618,regulation of shoot system morphogenesis; GO:1905392,plant organ morphogenesis; GO:0010243,response to organonitrogen compound; GO:1901698,response to nitrogen compound; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF13639.9:Ring finger domain","--","--","--"]
["MS16G12080",7.5132,9.9968,13.0822,0.0364,0.1524,0.4758,0,0.0375,0.2359,0.9191,1.6186,0.8161,0.2377,0.2043,0.1019,282,374,481,1,5,15,0,1,8,28,52,31,7,6,3,-3.010404909,"1.92474E-21","5.20862E-20","down",-5.514860407,"2.06666E-35","8.33919E-34","down",-5.29085649,"4.64167E-27","1.32812E-25","down",-6.406032126,"8.55756E-29","1.99052E-27","down",-3.440684999,"2.82155E-05",0.000187045,"down","NA","NA","NA","NA","NA","NA","NA","NA",-2.290918487,0.001539706,0.008899947,"down","NA","NA","NA","NA","chr_0016",16084438,16086042,"+","MS16G12080","--","K15398 fatty acid omega-hydroxylase [EC:1.14.-.-] | (RefSeq) cytochrome P450 86A22-like (A)","ko00073: Cutin, suberine and wax biosynthesis; ko01100: Metabolic pathways","cytochrome P450 86A22-like [Malus domestica]","86A22_PETHY RecName: Full=Cytochrome P450 86A22 {ECO:0000303|PubMed:19940120}; EC=1.14.14.129 {ECO:0000269|PubMed:19940120}; AltName: Full=Long-chain acyl-CoA omega-monooxygenase {ECO:0000305};","A0A540KUG1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD77836.1};","Cytochrome P450 CYP4/CYP19/CYP26 subfamilies","GO:0016021,integral component of membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0035336,long-chain fatty-acyl-CoA metabolic process; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0004497,monooxygenase activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0006139,nucleobase-containing compound metabolic process; GO:0006163,purine nucleotide metabolic process; GO:0006629,lipid metabolic process; GO:0006637,acyl-CoA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006790,sulfur compound metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009117,nucleotide metabolic process; GO:0009150,purine ribonucleotide metabolic process; GO:0009259,ribonucleotide metabolic process; GO:0009987,cellular process; GO:0019637,organophosphate metabolic process; GO:0019693,ribose phosphate metabolic process; GO:0033865,nucleoside bisphosphate metabolic process; GO:0033875,ribonucleoside bisphosphate metabolic process; GO:0034032,purine nucleoside bisphosphate metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0035337,fatty-acyl-CoA metabolic process; GO:0035383,thioester metabolic process; GO:0043603,cellular amide metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044281,small molecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0072521,purine-containing compound metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901568,fatty acid derivative metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["MS16G13770",5.1491,5.6379,4.8829,1.0719,0.5085,1.0891,1.1017,0.7364,0.7233,1.8999,1.8933,2.0919,1.1658,0.7349,0.7334,197,215,183,30,17,35,32,20,25,59,62,81,35,22,22,-1.225403656,"6.4318E-09","4.69415E-08","down",-2.278389127,"6.78009E-16","7.3169E-15","down",-2.356936216,"3.1925E-14","3.17502E-13","down",-2.33505569,"4.57402E-16","4.67619E-15","down",-1.094334581,0.001205615,0.005096236,"down",-0.038699933,0.928675609,0.962302109,false,0.023997488,0.95786417,0.989105499,false,-1.113427224,0.002448195,0.012992506,"down",-0.053843481,0.906029389,0.966715013,false,"chr_0016",21212873,21217746,"-","MS16G13770","--","K15015 solute carrier family 32 (vesicular inhibitory amino acid transporter) | (RefSeq) amino acid transporter AVT1A (A)","--","amino acid transporter AVT1A [Malus domestica]","AVT1A_ARATH RecName: Full=Amino acid transporter AVT1A {ECO:0000305}; Short=AtAvt1A {ECO:0000303|PubMed:27925655};","A0A5N5FZ29_9ROSA SubName: Full=Vacuolar amino acid transporter 1 {ECO:0000313|EMBL:KAB2608399.1};","Amino acid transporters","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0000325,plant-type vacuole; GO:0015171,amino acid transmembrane transporter activity; GO:0003333,amino acid transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005342,organic acid transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0046943,carboxylic acid transmembrane transporter activity; GO:0006810,transport; GO:0006865,amino acid transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015849,organic acid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:1903825,organic acid transmembrane transport; GO:1905039,carboxylic acid transmembrane transport; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01490.21:Transmembrane amino acid transporter protein","--","--","--"]
["MS16G14750",1.3718,1.2101,0.7243,0.0323,0,0,0.0312,0,0.0524,0.1748,0.0553,0.0701,0.0603,0.0604,0,58,51,30,1,0,0,1,0,2,6,2,3,2,2,0,-3.300481946,"2.66498E-07","1.51623E-06","down",-4.487866343,"2.04821E-07","8.78717E-07","down",-6.515283443,"3.74207E-07","1.56767E-06","down",-4.950467827,"3.48524E-07","1.40154E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0016",23255366,23258455,"+","MS16G14750","--","K26222 UDP-galactose transporter | (RefSeq) UDP-galactose transporter 1 (A)","--","hypothetical protein PRUPE_7G054100 [Prunus persica]","UUAT1_ARATH RecName: Full=UDP-URONIC ACID TRANSPORTER 1 {ECO:0000303|PubMed:28062750};","A0A251N725_PRUPE RecName: Full=TPT domain-containing protein {ECO:0000259|Pfam:PF03151};","Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter","GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0015297,antiporter activity; GO:0008643,carbohydrate transport; GO:0048359,mucilage metabolic process involved in seed coat development; GO:0015780,nucleotide-sugar transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015291,secondary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0006810,transport; GO:0008150,biological_process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008152,metabolic process; GO:0009791,post-embryonic development; GO:0009987,cellular process; GO:0010154,fruit development; GO:0010191,mucilage metabolic process; GO:0010214,seed coat development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0044237,cellular metabolic process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0015931,nucleobase-containing compound transport; GO:0055085,transmembrane transport; GO:0071705,nitrogen compound transport; GO:1901264,carbohydrate derivative transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane","PF03151.19:Triose-phosphate Transporter family","--","--","--"]
["MS16G16080",15.3702,14.2802,18.0105,7.6848,6.2962,6.8351,2.6784,4.3806,7.8113,5.3786,5.7294,6.382,3.7345,5.35,6.4077,257,238,295,94,92,96,34,52,118,73,82,108,49,70,84,-1.255822759,"2.19931E-10","1.9629E-09","down",-1.330157507,"2.40842E-08","1.17273E-07","down",-0.981650078,"1.89923E-06","7.18081E-06",false,-1.402585919,"3.85196E-05",0.00011423,"down",-0.130742664,0.735514567,0.829746894,false,-0.054980343,0.892821519,0.942225989,false,-0.422159513,0.27571556,0.724794358,false,0.292642056,0.216727932,0.393391892,false,0.374383323,0.183754726,0.456428893,false,"chr_0016",26090949,26091663,"-","MS16G16080","--","--","--","uncharacterized protein LOC103424320 [Malus domestica]","--","A0A498I0H1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH76590.1};","--","--","--","--","--","--"]
["MS16G17030",1.522,1.2238,1.2224,0.3977,0.2177,0.6661,0.2211,0.5202,0.4212,0.7997,0.6799,0.6524,0.7986,0.4147,0.8707,136,109,107,26,17,50,15,33,34,58,52,59,56,29,61,-0.712100303,0.005948389,0.0138705,false,-0.636795322,0.048992923,0.078133145,false,-1.435836885,0.00025309,0.000665243,"down",-1.494154153,"2.11195E-05","6.53531E-05","down",-0.769893338,0.05250766,0.119160549,false,-0.839195024,0.062458957,0.168679949,false,-0.051372676,0.921964402,0.981527674,false,-0.71207059,0.100184578,0.231120652,false,-0.777235584,0.104590011,0.332788194,false,"chr_0016",27668691,27677278,"+","MS16G17030","--","K14792 rRNA biogenesis protein RRP5 | (RefSeq) rRNA biogenesis protein RRP5 (A)","--","hypothetical protein C1H46_028765 [Malus baccata]","RRP5_ARATH RecName: Full=rRNA biogenesis protein RRP5 {ECO:0000303|PubMed:23382868}; Short=AtRrp5 {ECO:0000303|PubMed:23382868}; AltName: Full=Ribosomal RNA-processing protein 5 {ECO:0000303|PubMed:23382868};","A0A540LGW4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD85713.1};","rRNA processing protein Rrp5","GO:0005730,nucleolus; GO:0005886,plasma membrane; GO:0032040,small-subunit processome; GO:0003723,RNA binding; GO:0009553,embryo sac development; GO:0006364,rRNA processing; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016072,rRNA metabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0034470,ncRNA processing; GO:0034641,cellular nitrogen compound metabolic process; GO:0034660,ncRNA metabolic process; GO:0042254,ribosome biogenesis; GO:0043170,macromolecule metabolic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0071944,cell periphery; GO:0030684,preribosome; GO:0032991,protein-containing complex; GO:1990904,ribonucleoprotein complex","PF00575.26:S1 RNA binding domain","--","--","--"]
["MS16G18090",3.9754,4.0577,2.9643,1.4649,1.5032,0.7819,1.5937,1.5095,1.3009,2.683,3.8771,2.6642,3.5683,1.4578,2.4691,115,117,84,31,38,19,35,31,34,63,96,78,81,33,56,-0.076545688,0.778618603,0.83665897,false,-0.258112618,0.470689316,0.551368246,false,-1.33309684,0.000295481,0.000767793,"down",-1.043502108,0.000696896,0.001663003,"down",-0.954912622,0.002738412,0.010315254,false,-0.766724179,0.058819732,0.161512051,false,0.287619705,0.494735238,0.853240002,false,-1.239635739,0.001366223,0.00807474,"down",-1.04574592,0.023951673,0.131178122,false,"chr_0016",29404780,29410950,"+","MS16G18090","--","--","--","uncharacterized protein LOC126598366 isoform X2 [Malus sylvestris]","--","A0A498I2G6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH76374.1};","--","GO:0016021,integral component of membrane; GO:0005811,lipid droplet; GO:0016298,lipase activity; GO:0019915,lipid storage; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0008150,biological_process; GO:0010876,lipid localization; GO:0033036,macromolecule localization; GO:0051179,localization; GO:0051235,maintenance of location; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle","PF10230.12:Lipid-droplet associated hydrolase","--","--","--"]
["MS16G19310",7.4874,7.9013,8.8891,3.7908,5.7754,4.5559,2.2647,3.4375,2.8239,4.6463,8.2939,5.2061,3.1099,6.379,4.8104,135,142,157,50,91,69,31,44,46,68,128,95,44,90,68,-0.241232848,0.355386415,0.454925927,false,-0.473968495,0.092907829,0.137499676,false,-0.556645321,0.033430042,0.055953429,false,-1.229046431,"4.46397E-06","1.53017E-05","down",-0.974637954,0.004256988,0.015055277,false,-0.737732518,0.041415874,0.125380317,false,-0.67283632,0.049137006,0.39829573,false,-0.300330771,0.370648737,0.561242103,false,-0.056977628,0.87174266,0.953249292,false,"chr_0016",31024528,31032706,"+","MS16G19310","--","K12873 bud site selection protein 31 | (RefSeq) protein BUD31 homolog 1 isoform X1 (A)","ko03040: Spliceosome","protein BUD31 homolog 1 isoform X1 [Malus sylvestris]","BD31A_ORYSJ RecName: Full=Protein BUD31 homolog 1 {ECO:0000305}; AltName: Full=Protein G10 homolog 1 {ECO:0000305};","A0A540KU50_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD77717.1};","G10 protein/predicted nuclear transcription regulator","GO:0005681,spliceosomal complex; GO:0000398,mRNA splicing, via spliceosome; GO:0000375,RNA splicing, via transesterification reactions; GO:0000377,RNA splicing, via transesterification reactions with bulged adenosine as nucleophile; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006397,mRNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008380,RNA splicing; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016071,mRNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:1990904,ribonucleoprotein complex","PF01125.20:G10 protein","--","--","--"]
["MS16G20170",0.9842,1.3401,0.9868,0.2643,0.0603,0.2511,0.0463,0.3961,0.0973,0.2382,0.4312,0.1737,0.0672,0.2021,0.0897,56,76,55,11,3,12,2,16,5,11,21,10,3,9,4,-1.806482131,"3.04153E-05",0.000120016,"down",-2.916930773,"2.44422E-08","1.18898E-07","down",-2.340106961,"5.19762E-06","1.8341E-05","down",-2.353840781,0.000196643,0.00051666,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0016",32072223,32074851,"-","MS16G20170","--","--","--","zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Malus sylvestris]","RSLE2_ORYSJ RecName: Full=Zinc finger BED domain-containing protein RICESLEEPER 2; AltName: Full=Transposase-like protein RICESLEEPER 2;","A0A540MZM5_MALBA RecName: Full=BED-type domain-containing protein {ECO:0000259|PROSITE:PS50808};","Tam3-transposase (Ac family)","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0046872,metal ion binding; GO:0046983,protein dimerization activity; GO:0009791,post-embryonic development; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0005515,protein binding; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF05699.17:hAT family C-terminal dimerisation region","--","--","--"]
["MS17G00640",7.34,10.3094,12.5205,3.884,1.5715,1.2966,2.1207,2.3346,2.5684,1.9252,3.0428,1.2165,1.9311,0.6657,1.5704,155,217,259,60,29,23,34,35,49,33,55,26,32,11,26,-2.108919723,"3.29163E-09","2.51022E-08","down",-2.554564748,"6.00056E-12","4.43207E-11","down",-1.944588099,"7.67239E-06","2.6298E-05","down",-1.815309681,"2.51029E-10","1.49572E-09","down",0.302015554,0.467740032,0.6161585,false,0.75510966,0.090034796,0.219185723,false,0.128054644,0.790251858,0.950138071,false,0.176465368,0.75098592,0.860995045,false,0.637045584,0.272992899,0.563594307,false,"chr_0017",638647,640111,"-","MS17G00640","--","K18789 xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41] | (RefSeq) probable glycosyltransferase At5g20260 isoform X1 (A)","--","probable glycosyltransferase At5g20260 isoform X9 [Malus sylvestris]","GLYT5_ARATH RecName: Full=Probable glycosyltransferase At5g20260; EC=2.4.-.-;","A0A540M5Z6_MALBA RecName: Full=Exostosin domain-containing protein {ECO:0000259|Pfam:PF03016};","Acetylglucosaminyltransferase EXT1/exostosin 1","GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0016757,glycosyltransferase activity; GO:0071555,cell wall organization; GO:0006486,protein glycosylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009100,glycoprotein metabolic process; GO:0009101,glycoprotein biosynthetic process; GO:0019538,protein metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043413,macromolecule glycosylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0070085,glycosylation; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005794,Golgi apparatus; GO:0012505,endomembrane system; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF03016.18:Exostosin family","--","--","--"]
["MS17G01500",6.1251,11.8881,9.2915,3.0518,3.2097,4.8386,3.0914,2.9835,2.5978,7.9692,5.3502,9.672,4.9606,9.2175,7.5204,107,207,159,39,49,71,41,37,41,113,80,171,68,126,103,-0.053138672,0.87285892,0.908330245,false,-0.041952496,0.894872888,0.919624956,false,-1.088597494,0.001254923,0.002889097,"down",-1.371447173,"2.94659E-05","8.91226E-05","down",-1.303909813,"7.76428E-05",0.000460924,"down",-1.31525569,"4.21409E-05",0.000468904,"down",-0.285893771,0.38724523,0.799900708,false,-1.015666416,0.002610134,0.013677596,"down",-1.021197696,0.001882409,0.021498402,"down","chr_0017",1684491,1685237,"-","MS17G01500","--","K14516 ethylene-responsive transcription factor 1 | (RefSeq) ethylene-responsive transcription factor 1B-like (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction","ethylene-responsive transcription factor 1B-like [Malus domestica]","ERF92_ARATH RecName: Full=Ethylene-responsive transcription factor 1B; Short=AtERF1B; AltName: Full=Ethylene-responsive element-binding factor 1B; Short=EREBP-1B;","A0A498K801_MALDO SubName: Full=AP2 domain class transcription factor {ECO:0000313|EMBL:AUZ96369.1};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0006952,defense response; GO:0009873,ethylene-activated signaling pathway; GO:0009867,jasmonic acid mediated signaling pathway; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009723,response to ethylene; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0009753,response to jasmonic acid; GO:0033993,response to lipid; GO:0070542,response to fatty acid; GO:0071395,cellular response to jasmonic acid stimulus; GO:0071396,cellular response to lipid; GO:0071398,cellular response to fatty acid; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00847.23:AP2 domain","AP2/ERF-ERF","TF","AP2/ERF->AP2/ERF-ERF"]
["MS17G02360",33.2589,40.5172,38.3476,10.5541,12.0631,16.969,10.952,10.4573,11.8328,17.0117,27.9278,26.5538,13.8126,18.4052,17.2336,224,272,253,52,71,96,56,50,72,93,161,181,73,97,91,-0.466583295,0.036209736,0.066931501,false,-0.889676303,"1.40589E-05","4.60118E-05",false,-1.289266715,"7.55225E-08","3.49007E-07","down",-1.470267385,"1.12428E-11","7.68547E-11","down",-0.990740946,0.000243152,0.001263393,false,-0.564898405,0.027434497,0.092348235,false,-0.181905005,0.52613115,0.865033498,false,-0.806362739,0.006039909,0.026810774,false,-0.374930195,0.176231652,0.446802667,false,"chr_0017",2399951,2401310,"+","MS17G02360","--","--","--","hypothetical protein D8674_007346 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5HSK5_9ROSA RecName: Full=Rubredoxin-like domain-containing protein {ECO:0000259|PROSITE:PS50903};","--","GO:0016021,integral component of membrane; GO:0005506,iron ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00301.23:Rubredoxin","--","--","--"]
["MS17G02420",10.7342,10.901,10.0186,5.4501,5.2141,5.1116,2.6546,5.1841,4.4615,7.9346,10.8515,8.4849,8.2634,7.3907,9.053,245,248,224,91,104,98,46,84,92,147,212,196,148,132,162,-0.033944612,0.853642933,0.89477028,false,-0.06591149,0.716476886,0.774165122,false,-0.790905968,"5.03088E-05",0.00015009,false,-1.084322658,"6.18598E-05",0.000177724,"down",-1.037013803,0.000437018,0.002114123,"down",-1.001510779,0.000459669,0.003480277,"down",-0.293980678,0.342718802,0.773577711,false,-0.740273446,0.000907562,0.005776572,false,-0.699195719,0.001096318,0.014435985,false,"chr_0017",2480427,2482736,"+","MS17G02420","--","K14800 pre-rRNA-processing protein TSR2 | (RefSeq) pre-rRNA-processing protein TSR2 homolog (A)","--","pre-rRNA-processing protein TSR2 homolog [Malus domestica]","--","A0A498K3H0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI01946.1};","Uncharacterized conserved protein","GO:0006364,rRNA processing; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016072,rRNA metabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0034470,ncRNA processing; GO:0034641,cellular nitrogen compound metabolic process; GO:0034660,ncRNA metabolic process; GO:0042254,ribosome biogenesis; GO:0043170,macromolecule metabolic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process","PF10273.12:Pre-rRNA-processing protein TSR2","--","--","--"]
["MS17G03050",57.5825,67.1966,61.8956,19.63,15.2964,23.2163,15.6924,8.8902,14.8744,29.3547,41.1758,37.1012,28.6023,29.7701,28.9893,1624,1889,1710,405,377,550,336,178,379,672,994,1059,633,657,641,-0.612865098,"4.8411E-05",0.000183928,false,-0.803051828,"8.5296E-11","5.56156E-10",false,-1.475945532,"9.10503E-17","1.14965E-15","down",-1.961404302,"1.764E-18","2.16855E-17","down",-1.336162367,"4.0554E-08","4.97614E-07","down",-1.142491956,"3.89554E-07","7.86272E-06","down",-0.487026266,0.05966059,0.433403698,false,-0.847234147,"1.66147E-05",0.000193138,false,-0.64825439,0.000171829,0.003357645,false,"chr_0017",3127184,3129244,"+","MS17G03050","--","--","--","UPF0603 protein At1g54780, chloroplastic-like [Malus domestica]","U603_ARATH RecName: Full=UPF0603 protein At1g54780, chloroplastic; AltName: Full=Thylakoid lumen 18.3 kDa protein; Flags: Precursor;","A0A540M5J9_MALBA RecName: Full=TPM_phosphatase domain-containing protein {ECO:0000259|Pfam:PF04536};","--","GO:0009507,chloroplast; GO:0009534,chloroplast thylakoid; GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0009579,thylakoid; GO:0031977,thylakoid lumen; GO:0003993,acid phosphatase activity; GO:0003729,mRNA binding; GO:0010206,photosystem II repair; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006091,generation of precursor metabolites and energy; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009765,photosynthesis, light harvesting; GO:0009987,cellular process; GO:0015979,photosynthesis; GO:0019538,protein metabolic process; GO:0019684,photosynthesis, light reaction; GO:0030091,protein repair; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0009526,plastid envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane; GO:0031224,intrinsic component of membrane","PF04536.17:TPM domain","--","--","--"]
["MS17G04050",3.171,3.4671,3.7411,0.1298,0.0652,0.2713,0.1,0.1872,0.2312,0.5848,0.4659,0.3002,0.2904,0.0971,0.1453,167,182,193,5,3,12,4,7,11,25,21,16,12,4,6,-2.77035037,"8.53707E-20","1.99588E-18","down",-3.987353288,"6.16931E-24","1.21239E-22","down",-4.269335361,"6.83621E-24","1.56996E-22","down",-4.025141105,"1.05823E-24","1.94576E-23","down",-1.267046291,0.039668724,0.095591261,false,"NA","NA","NA","NA","NA","NA","NA","NA",-1.511722,0.027028252,0.08676001,false,"NA","NA","NA","NA","chr_0017",3965995,3969958,"+","MS17G04050","--","--","--","uncharacterized protein LOC126618972 [Malus sylvestris]","--","A0A498K305_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI01797.1};","--","--","PF07719.20:Tetratricopeptide repeat","--","--","--"]
["MS17G04860",0.5556,0.6003,0.5672,0.1168,0.0245,0.0254,0.0281,0,0,0.0527,0.2746,0.1689,0.2451,0.1365,0.1363,26,28,26,4,1,1,1,0,0,2,11,8,9,5,5,-1.614649678,0.006327101,0.014661033,"down",-1.438613978,0.009534489,0.018187821,"down",-3.214815459,"5.2764E-05",0.000156896,"down",-5.600054008,"1.59076E-05","5.02496E-05","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0017",4595277,4602098,"-","MS17G04860","--","K01184 polygalacturonase [EC:3.2.1.15] | (RefSeq) polygalacturonase At1g48100 isoform X1 (A)","ko00040: Pentose and glucuronate interconversions; ko01100: Metabolic pathways","hypothetical protein DVH24_015060 [Malus domestica]","PGLR4_ARATH RecName: Full=Polygalacturonase At1g48100; Short=PG; EC=3.2.1.15; AltName: Full=Pectinase At1g48100; Flags: Precursor;","A0A498K294_MALDO RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};","--","GO:0005576,extracellular region; GO:0004650,polygalacturonase activity; GO:0005975,carbohydrate metabolic process; GO:0009831,plant-type cell wall modification involved in multidimensional cell growth; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0009664,plant-type cell wall organization; GO:0009825,multidimensional cell growth; GO:0009827,plant-type cell wall modification; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0016049,cell growth; GO:0040007,growth; GO:0042545,cell wall modification; GO:0042547,cell wall modification involved in multidimensional cell growth; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00295.20:Glycosyl hydrolases family 28","--","--","--"]
["MS17G05880",12.5332,14.0458,13.6449,0.4952,0.6839,0.8193,0.5725,0.4337,0.7618,2.7891,3.3221,2.3264,1.5002,1.3193,0.7854,692,773,738,20,33,38,24,17,38,125,157,130,65,57,34,-2.071734026,"1.68749E-31","9.16675E-30","down",-3.184396893,"1.09037E-42","6.08812E-41","down",-4.107780524,"4.42455E-71","9.909E-69","down",-4.210043347,"3.66024E-70","5.01807E-68","down",-2.135117902,"1.62034E-11","3.43744E-10","down",-1.021940691,0.011239846,0.046562911,"down",-0.109220108,0.792480234,0.951017665,false,-2.026489382,"7.91346E-11","3.27941E-09","down",-0.904319152,0.021742998,0.122919115,false,"chr_0017",5897760,5901321,"+","MS17G05880","--","K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) systemin receptor SR160 (A)","ko04075: Plant hormone signal transduction","hypothetical protein DVH24_014944 [Malus domestica]","Y3868_ARATH RecName: Full=Probable inactive receptor kinase At3g08680; Flags: Precursor;","A0A498K6T0_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0005829,cytosol; GO:0016021,integral component of membrane; GO:0009505,plant-type cell wall; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0005524,ATP binding; GO:0004672,protein kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0005618,cell wall; GO:0030312,external encapsulating structure; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF00069.28:Protein kinase domain","--","--","--"]
["MS17G06780",2.0224,1.8054,1.0498,0.6091,0.4903,0.4897,0.2032,0.4828,0.2656,0.7601,0.3204,0.5419,0.1966,0.1095,0.1749,118,105,60,26,25,24,9,20,14,36,16,32,9,5,8,-1.397540562,0.001163319,0.003242524,"down",-3.054603243,"2.05407E-10","1.28813E-09","down",-1.412118962,0.000254072,0.000667414,"down",-2.090565454,"5.01874E-06","1.71008E-05","down",-0.67443581,0.235080759,0.377334121,false,"NA","NA","NA","NA",-0.677865276,0.17863703,0.636775432,false,0.00597481,0.989942937,0.994778936,false,1.668296604,0.001762082,0.020463214,"up","chr_0017",7003021,7005637,"+","MS17G06780","--","K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) systemin receptor SR160 (A)","ko04075: Plant hormone signal transduction","hypothetical protein DVH24_014853 [Malus domestica]","IMK2_ARATH RecName: Full=Probably inactive leucine-rich repeat receptor-like protein kinase IMK2; AltName: Full=Protein INFLORESCENCE MERISTEM RECEPTOR-LIKE KINASE 2; Flags: Precursor;","A0A498K5H0_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0009505,plant-type cell wall; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0005524,ATP binding; GO:0004672,protein kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005618,cell wall; GO:0030312,external encapsulating structure; GO:0071944,cell periphery; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["MS17G07350",4.7696,6.1503,5.2759,1.0146,1.1639,1.5545,0.8509,1.1811,1.2628,3.0312,2.8745,2.4718,0.8758,1.4404,2.3493,347,446,376,54,74,95,47,61,83,179,179,182,50,82,134,-0.764799029,"6.62063E-05",0.00024514,false,-1.509693911,"1.33592E-06","5.1239E-06","down",-1.904201176,"1.47168E-16","1.82344E-15","down",-2.01553223,"1.93279E-18","2.36822E-17","down",-1.238014646,"8.04331E-07","7.58812E-06","down",-0.490516063,0.197254692,0.377420252,false,-0.110921037,0.710725519,0.925316413,false,-1.123967595,"7.5656E-06","9.71347E-05","down",-0.372810415,0.330741493,0.622089982,false,"chr_0017",7858646,7861866,"+","MS17G07350","--","--","--","receptor like protein 22-like [Malus domestica]","RLP54_ARATH RecName: Full=Receptor-like protein 54 {ECO:0000303|PubMed:18434605}; Short=AtRLP54 {ECO:0000303|PubMed:18434605}; Flags: Precursor;","A0A498K7U1_MALDO RecName: Full=LRRNT_2 domain-containing protein {ECO:0000259|Pfam:PF08263};","FOG: Leucine rich repeat","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0009536,plastid; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF13855.9:Leucine rich repeat","--","--","--"]
["MS17G08340",93.0927,97.5408,102.6722,4.384,3.9013,6.329,4.3004,2.564,5.8844,8.0446,13.6371,10.2773,7.4745,8.5662,5.6016,3222,3365,3481,111,118,184,113,63,184,226,404,360,203,232,152,-3.018657997,"6.6761E-62","1.64404E-59","down",-3.466426635,"1.24679E-87","3.09466E-85","down",-4.1188308,"2.3823E-107","1.8673E-104","down",-4.243449926,"1.66323E-66","2.00329E-64","down",-1.214580439,0.000138879,0.000769755,"down",-0.76289177,0.015606102,0.059807182,false,-0.125944175,0.705197556,0.923932208,false,-1.086358433,"4.41607E-05",0.000451094,"down",-0.62873733,0.016629156,0.10229182,false,"chr_0017",9267142,9269498,"-","MS17G08340","--","K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] | (RefSeq) fructose-1,6-bisphosphatase, chloroplastic (A)","ko00010: Glycolysis / Gluconeogenesis; ko00030: Pentose phosphate pathway; ko00051: Fructose and mannose metabolism; ko00710: Carbon fixation in photosynthetic organisms; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01200: Carbon metabolism","fructose-1,6-bisphosphatase, chloroplastic [Malus domestica]","F16P1_PEA RecName: Full=Fructose-1,6-bisphosphatase, chloroplastic; Short=FBPase; EC=3.1.3.11; AltName: Full=D-fructose-1,6-bisphosphate 1-phosphohydrolase; Flags: Precursor;","A0A498K434_MALDO RecName: Full=Fructose-bisphosphatase {ECO:0000256|ARBA:ARBA00013093}; EC=3.1.3.11 {ECO:0000256|ARBA:ARBA00013093}; AltName: Full=D-fructose-1,6-bisphosphate 1-phosphohydrolase {ECO:0000256|ARBA:ARBA00032973};","Fructose-1,6-bisphosphatase","GO:0009570,chloroplast stroma; GO:0010319,stromule; GO:0042132,fructose 1,6-bisphosphate 1-phosphatase activity; GO:0046872,metal ion binding; GO:0030388,fructose 1,6-bisphosphate metabolic process; GO:0009773,photosynthetic electron transport in photosystem I; GO:0019253,reductive pentose-phosphate cycle; GO:0009409,response to cold; GO:0005985,sucrose metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0019203,carbohydrate phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0050308,sugar-phosphatase activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0019637,organophosphate metabolic process; GO:0044237,cellular metabolic process; GO:0071704,organic substance metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:0006091,generation of precursor metabolites and energy; GO:0009767,photosynthetic electron transport chain; GO:0015979,photosynthesis; GO:0019684,photosynthesis, light reaction; GO:0022900,electron transport chain; GO:0005975,carbohydrate metabolic process; GO:0009058,biosynthetic process; GO:0015977,carbon fixation; GO:0016051,carbohydrate biosynthetic process; GO:0019685,photosynthesis, dark reaction; GO:0044238,primary metabolic process; GO:1901576,organic substance biosynthetic process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0050896,response to stimulus; GO:0005984,disaccharide metabolic process; GO:0009311,oligosaccharide metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009532,plastid stroma; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope","PF00316.23:Fructose-1-6-bisphosphatase, N-terminal domain","--","--","--"]
["MS17G09280",5.3773,4.3159,5.919,7.2867,8.7216,8.2665,5.9743,7.344,5.9261,8.8426,8.167,9.5175,9.7129,9.5011,9.3338,230,184,248,228,326,297,194,223,229,307,299,412,326,318,313,0.955348728,"2.92354E-07","1.65473E-06",false,1.165274147,"2.46681E-11","1.70717E-10","up",0.855820849,"1.95919E-05","6.27624E-05",false,0.588175947,0.005514451,0.011090037,false,-0.355018614,0.064179489,0.139935719,false,-0.563598716,0.001933676,0.011404647,false,-0.271063184,0.192227598,0.649553584,false,-0.080822871,0.656902826,0.798642362,false,-0.282971239,0.100072552,0.324802224,false,"chr_0017",10778235,10782967,"+","MS17G09280","--","K20029 palmitoyltransferase ZDHHC3/7/25 [EC:2.3.1.225] | (RefSeq) probable protein S-acyltransferase 16 isoform X1 (A)","--","probable protein S-acyltransferase 16 isoform X2 [Malus domestica]","ZDHC6_ARATH RecName: Full=Probable protein S-acyltransferase 16; EC=2.3.1.225; AltName: Full=Probable palmitoyltransferase At3g09320; AltName: Full=Zinc finger DHHC domain-containing protein At3g09320;","A0A498K8N9_MALDO RecName: Full=S-acyltransferase {ECO:0000256|RuleBase:RU079119}; EC=2.3.1.225 {ECO:0000256|RuleBase:RU079119}; AltName: Full=Palmitoyltransferase {ECO:0000256|RuleBase:RU079119};","Predicted DHHC-type Zn-finger protein","GO:0005783,endoplasmic reticulum; GO:0005794,Golgi apparatus; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0019706,protein-cysteine S-palmitoyltransferase activity; GO:0018230,peptidyl-L-cysteine S-palmitoylation; GO:0006612,protein targeting to membrane; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016409,palmitoyltransferase activity; GO:0016417,S-acyltransferase activity; GO:0016740,transferase activity; GO:0016746,acyltransferase activity; GO:0016747,acyltransferase activity, transferring groups other than amino-acyl groups; GO:0019707,protein-cysteine S-acyltransferase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006497,protein lipidation; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0018193,peptidyl-amino acid modification; GO:0018198,peptidyl-cysteine modification; GO:0018231,peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine; GO:0018345,protein palmitoylation; GO:0019538,protein metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0036211,protein modification process; GO:0042157,lipoprotein metabolic process; GO:0042158,lipoprotein biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043543,protein acylation; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006605,protein targeting; GO:0006810,transport; GO:0006886,intracellular protein transport; GO:0008104,protein localization; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0051668,localization within membrane; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0072657,protein localization to membrane; GO:0090150,establishment of protein localization to membrane; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane","PF01529.23:DHHC palmitoyltransferase","--","--","--"]
["MS17G10090",1.2934,0.7299,0.5364,0.0552,0.2004,0.0642,0.0532,0.1518,0.1342,0.166,0.0315,0.2396,0.1202,0.2238,0.1031,96,54,39,3,13,4,3,8,9,10,2,18,7,13,6,-2.346716762,0.000196415,0.000659499,"down",-2.234430582,"2.97082E-05","9.2319E-05","down",-2.757007834,"1.52416E-05","4.97575E-05","down",-2.64319029,"4.70625E-06","1.60877E-05","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0017",12094897,12101952,"-","MS17G10090","--","K10398 kinesin family member 11 | (RefSeq) kinesin-like protein KIN-5B (A)","ko04814: Motor proteins","kinesin-like protein KIN-5B [Malus sylvestris]","KN5B_ARATH RecName: Full=Kinesin-like protein KIN-5B {ECO:0000305}; AltName: Full=AtKRP125a {ECO:0000303|PubMed:11472632};","A0A498K4T0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI02307.1};","Kinesin-like protein","GO:0005737,cytoplasm; GO:0072686,mitotic spindle; GO:0005876,spindle microtubule; GO:0005524,ATP binding; GO:0008017,microtubule binding; GO:0008574,plus-end-directed microtubule motor activity; GO:0007018,microtubule-based movement; GO:0000070,mitotic sister chromatid segregation; GO:0090307,mitotic spindle assembly; GO:0051231,spindle elongation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0015631,tubulin binding; GO:0003774,cytoskeletal motor activity; GO:0003777,microtubule motor activity; GO:0140657,ATP-dependent activity; GO:0007017,microtubule-based process; GO:0008150,biological_process; GO:0009987,cellular process; GO:0000278,mitotic cell cycle; GO:0000280,nuclear division; GO:0000819,sister chromatid segregation; GO:0006996,organelle organization; GO:0007049,cell cycle; GO:0007059,chromosome segregation; GO:0016043,cellular component organization; GO:0022402,cell cycle process; GO:0048285,organelle fission; GO:0051276,chromosome organization; GO:0071840,cellular component organization or biogenesis; GO:0098813,nuclear chromosome segregation; GO:0140014,mitotic nuclear division; GO:1903047,mitotic cell cycle process; GO:0000226,microtubule cytoskeleton organization; GO:0007010,cytoskeleton organization; GO:0007051,spindle organization; GO:0007052,mitotic spindle organization; GO:0022607,cellular component assembly; GO:0044085,cellular component biogenesis; GO:0051225,spindle assembly; GO:0070925,organelle assembly; GO:0140694,non-membrane-bounded organelle assembly; GO:1902850,microtubule cytoskeleton organization involved in mitosis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0005819,spindle; GO:0005856,cytoskeleton; GO:0015630,microtubule cytoskeleton; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0005874,microtubule; GO:0099080,supramolecular complex; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber","PF00225.26:Kinesin motor domain","--","--","--"]
["MS17G11070",9.4047,6.1857,6.5842,7.03,10.079,6.4606,11.5269,15.8089,9.7807,8.051,7.8339,7.8888,9.74,6.2816,7.7916,331,217,227,181,310,191,308,395,311,230,236,281,269,173,215,0.285765044,0.195953475,0.279537588,false,0.395851968,0.122463547,0.175040202,false,0.310908652,0.282428794,0.358968383,false,1.030128255,0.000175866,0.000465691,"up",0.755875806,0.001644294,0.0066735,false,0.648118549,0.016103026,0.06131247,false,0.714377419,0.018062728,0.26822714,false,0.044319674,0.861804611,0.926072132,false,-0.057319919,0.841732643,0.941274074,false,"chr_0017",14005091,14009744,"+","MS17G11070","--","K09523 DnaJ homolog subfamily C member 3 | (RefSeq) LOW QUALITY PROTEIN: dnaJ protein P58IPK homolog (A)","ko04141: Protein processing in endoplasmic reticulum","hypothetical protein DVH24_001529 [Malus domestica]","DNJ36_ARATH RecName: Full=DnaJ protein P58IPK homolog; Short=AtP58IPK; AltName: Full=Chaperone protein dnaJ 36; Short=AtDjA36; Short=AtJ36; Flags: Precursor;","A0A498K5R9_MALDO RecName: Full=J domain-containing protein {ECO:0000259|PROSITE:PS50076};","Molecular chaperone (DnaJ superfamily)","GO:0005783,endoplasmic reticulum; GO:0005788,endoplasmic reticulum lumen; GO:0044794,positive regulation by host of viral process; GO:0008150,biological_process; GO:0016032,viral process; GO:0044403,biological process involved in symbiotic interaction; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0044788,modulation by host of viral process; GO:0051702,biological process involved in interaction with symbiont; GO:0051851,modulation by host of symbiont process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0031974,membrane-enclosed lumen; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen","PF00226.34:DnaJ domain","--","--","--"]
["MS17G12840",41.7542,47.0279,47.5213,26.1816,21.2137,28.8372,18.8647,11.2773,20.992,26.5404,34.422,34.6106,24.843,30.8027,26.193,2446,2746,2727,1122,1086,1419,839,469,1111,1262,1726,2052,1142,1412,1203,-0.328688156,0.015777115,0.032683458,false,-0.443790542,0.000782133,0.001882638,false,-0.628342936,"2.0567E-05","6.56391E-05",false,-1.136851059,"4.31903E-07","1.71688E-06","down",-0.794808371,0.000954783,0.004160697,false,-0.67681816,0.003903632,0.020097713,false,-0.509516614,0.037762453,0.363088357,false,-0.283138421,0.085361954,0.205999303,false,-0.159894201,0.318523612,0.609810573,false,"chr_0017",21226334,21230111,"-","MS17G12840","--","K02355 elongation factor G | (RefSeq) elongation factor G-2, chloroplastic (A)","--","elongation factor G-2, chloroplastic [Malus domestica]","EFGC2_SOYBN RecName: Full=Elongation factor G-2, chloroplastic; Short=cEF-G 2 {ECO:0000255|HAMAP-Rule:MF_03063}; Flags: Precursor;","A0A498K711_MALDO RecName: Full=Elongation factor G, chloroplastic {ECO:0000256|HAMAP-Rule:MF_03063}; Short=cEF-G {ECO:0000256|HAMAP-Rule:MF_03063};","Mitochondrial elongation factor","GO:0009507,chloroplast; GO:0005739,mitochondrion; GO:0005525,GTP binding; GO:0003924,GTPase activity; GO:0003746,translation elongation factor activity; GO:0032543,mitochondrial translation; GO:0032790,ribosome disassembly; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0019001,guanyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0003676,nucleic acid binding; GO:0008135,translation factor activity, RNA binding; GO:0045182,translation regulator activity; GO:0090079,translation regulator activity, nucleic acid binding; GO:0006412,translation; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:0140053,mitochondrial gene expression; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006996,organelle organization; GO:0016043,cellular component organization; GO:0022411,cellular component disassembly; GO:0071840,cellular component organization or biogenesis; GO:1903008,organelle disassembly; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00009.30:Elongation factor Tu GTP binding domain","--","--","--"]
["MS17G12870",0.386,0.2582,0.2627,0.9381,3.1411,2.502,1.0169,0.9666,0.8545,1.3738,1.0523,1.8223,1.2025,2.9598,3.1729,9,6,6,16,64,49,18,16,18,26,21,43,22,54,58,2.419629232,"6.96019E-06","3.11354E-05","up",3.298426794,"1.17854E-09","6.79896E-09","up",3.081194461,"4.3013E-07","1.78488E-06","up","NA","NA","NA","NA",-0.481815785,0.279277769,0.427318304,false,-1.359467645,0.003712689,0.01931731,"down",-1.162318993,0.027840228,0.319222508,false,0.684999749,0.188209845,0.357179421,false,-0.189375036,0.722171796,0.886342447,false,"chr_0017",21296527,21297523,"+","MS17G12870","--","K07195 exocyst complex component 7 | (RefSeq) exocyst complex component EXO70A1-like (A)","--","uncharacterized protein LOC126619672 [Malus sylvestris]","--","A0A540NSN4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE14019.1};","Exocyst component protein and related proteins","--","--","--","--","--"]
["MS17G14040",2.6471,1.1849,0.2079,0.9464,0.466,0.4848,0.1609,0.2868,0.1803,2.609,4.3773,2.8972,0.7785,2.9665,1.7661,65,29,5,17,10,10,3,5,4,52,92,72,15,57,34,1.453606857,0.029143933,0.055516816,false,0.714734428,0.336159856,0.41635163,false,-0.895089096,0.276920964,0.35314329,false,-2.425762181,0.007277535,0.014267326,"down",-3.87891695,"2.76133E-12","6.53109E-11","down",-3.133237611,"6.50133E-06","9.30255E-05","down","NA","NA","NA","NA",-2.346361417,"1.55408E-07","3.18294E-06","down",-1.594569533,0.007548943,0.05905587,false,"chr_0017",23991012,23992061,"+","MS17G14040","--","--","--","protein P21-like [Malus domestica]","TLP_ACTCC RecName: Full=Thaumatin-like protein; AltName: Allergen=Act c 2; Flags: Precursor;","A0A540L1H1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD80331.1};","--","GO:0005576,extracellular region; GO:0050832,defense response to fungus; GO:0031640,killing of cells of another organism; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0001906,cell killing; GO:0009987,cellular process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00314.20:Thaumatin family","--","--","--"]
["MS17G14560",0.0126,0,0,0.241,0.2882,0.1799,0.3483,0.3193,0.7526,0.1241,0.0883,0.0498,0.4012,0.1126,0.0642,1,0,0,14,20,12,21,18,54,8,6,4,25,7,4,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",6.975978042,"8.22577E-08","3.59033E-07","up",2.557972654,"4.71452E-05",0.000294396,"up",1.282401908,0.065681386,0.174802943,false,1.055920369,0.043475557,0.38120253,false,"NA","NA","NA","NA","NA","NA","NA","NA","chr_0017",24930872,24969807,"-","MS17G14560","--","K01535 H+-transporting ATPase [EC:7.1.2.1] | (RefSeq) ATPase 11, plasma membrane-type-like (A)","ko00190: Oxidative phosphorylation; ko01100: Metabolic pathways","ATPase 11, plasma membrane-type-like [Malus sylvestris]","PMA11_ARATH RecName: Full=ATPase 11, plasma membrane-type; EC=7.1.2.1; AltName: Full=Proton pump 11;","A0A498JYJ9_MALDO RecName: Full=Plasma membrane ATPase {ECO:0000256|RuleBase:RU362083}; EC=7.1.2.1 {ECO:0000256|RuleBase:RU362083};","Plasma membrane H+-transporting ATPase","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0046872,metal ion binding; GO:0003729,mRNA binding; GO:0015662,P-type ion transporter activity; GO:0008553,P-type proton-exporting transporter activity; GO:0034220,ion transmembrane transport; GO:0120029,proton export across plasma membrane; GO:1902600,proton transmembrane transport; GO:0051453,regulation of intracellular pH; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0140657,ATP-dependent activity; GO:0043169,cation binding; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005215,transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015399,primary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022853,active ion transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0140358,P-type transmembrane transporter activity; GO:0008324,cation transmembrane transporter activity; GO:0009678,pyrophosphate hydrolysis-driven proton transmembrane transporter activity; GO:0015078,proton transmembrane transporter activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0019829,ATPase-coupled cation transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0006810,transport; GO:0006811,ion transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0006812,cation transport; GO:0098655,cation transmembrane transport; GO:0098660,inorganic ion transmembrane transport; GO:0098662,inorganic cation transmembrane transport; GO:0140115,export across plasma membrane; GO:0140352,export from cell; GO:0006873,cellular ion homeostasis; GO:0006885,regulation of pH; GO:0019725,cellular homeostasis; GO:0030003,cellular cation homeostasis; GO:0030004,cellular monovalent inorganic cation homeostasis; GO:0030641,regulation of cellular pH; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055067,monovalent inorganic cation homeostasis; GO:0055080,cation homeostasis; GO:0055082,cellular chemical homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0098771,inorganic ion homeostasis; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00122.23:E1-E2 ATPase","--","--","--"]
["MS17G16120",16.5398,11.9056,10.0895,4.5035,2.462,2.5213,4.4723,6.2033,4.8373,5.7154,2.3172,2.0262,2.5704,4.7687,1.8009,492,353,294,98,64,63,101,131,130,138,59,61,60,111,42,-1.737381626,"2.87577E-05",0.000114159,"down",-1.789861864,"3.44585E-07","1.43171E-06","down",-1.814831511,"3.33692E-08","1.62833E-07","down",-1.033685499,0.000121389,0.000331163,"down",0.720430331,0.09855723,0.19537278,false,0.771166535,0.037475064,0.116666379,false,0.782812362,0.017265911,0.261894807,false,-0.057877556,0.90553962,0.950578847,false,0.000376121,0.999301619,0.999730311,false,"chr_0017",27667177,27668448,"-","MS17G16120","--","K13448 calcium-binding protein CML | (RefSeq) calmodulin-like protein 3 (A)","ko04626: Plant-pathogen interaction","calmodulin-like protein 3 [Malus domestica]","CML5_ARATH RecName: Full=Calmodulin-like protein 5; AltName: Full=Protein MULTICOPY SUPPRESSORS OF SNF4 DEFICIENCY IN YEAST 3;","A0A498K037_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI00796.1};","Calmodulin and related proteins (EF-Hand superfamily)","GO:0012505,endomembrane system; GO:0031303,integral component of endosome membrane; GO:0005509,calcium ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0010008,endosome membrane; GO:0012506,vesicle membrane; GO:0016020,membrane; GO:0016021,integral component of membrane; GO:0030659,cytoplasmic vesicle membrane; GO:0031090,organelle membrane; GO:0031224,intrinsic component of membrane; GO:0031300,intrinsic component of organelle membrane; GO:0031301,integral component of organelle membrane; GO:0031302,intrinsic component of endosome membrane; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0098588,bounding membrane of organelle","PF00036.35:EF hand","--","--","--"]
["MS17G16950",85.3805,103.1839,110.0755,37.2579,28.8774,49.5184,28.893,21.9214,31.1762,57.9389,80.8366,62.7444,54.276,107.5841,60.8193,3001,3615,3790,958,887,1462,771,547,990,1653,2432,2232,1497,2959,1676,-0.384269778,0.018236491,0.03705913,false,-0.132782609,0.596840619,0.668799324,false,-1.162718673,"2.56142E-08","1.27051E-07","down",-1.582744761,"1.32449E-19","1.75909E-18","down",-1.186855061,"4.90322E-10","8.37024E-09","down",-1.435767282,"1.47817E-07","3.31485E-06","down",-0.420782063,0.060358401,0.43572962,false,-0.763863941,0.000465634,0.003307793,false,-1.00610712,0.000570732,0.008682513,"down","chr_0017",29070309,29072759,"+","MS17G16950","--","K20547 basic endochitinase B [EC:3.2.1.14] | (RefSeq) endochitinase-like precursor (A)","ko00520: Amino sugar and nucleotide sugar metabolism; ko01100: Metabolic pathways; ko04016: MAPK signaling pathway - plant","chitinase-like protein 1 [Pyrus x bretschneideri]","CTL1_ARATH RecName: Full=Chitinase-like protein 1; Short=AtCTL1; AltName: Full=Protein ANION ALTERED ROOT MORPHOLOGY; AltName: Full=Protein ECTOPIC DEPOSITION OF LIGNIN IN PITH 1; AltName: Full=Protein ECTOPIC ROOT HAIR 2; AltName: Full=Protein POM-POM1; AltName: Full=Protein SENSITIVE TO HOT TEMPERATURES 2; Flags: Precursor;","A0A498I6S1_MALDO RecName: Full=Glyco_hydro_19_cat domain-containing protein {ECO:0000259|Pfam:PF00182};","Predicted chitinase","GO:0048046,apoplast; GO:0005794,Golgi apparatus; GO:0030247,polysaccharide binding; GO:0001708,cell fate specification; GO:0016998,cell wall macromolecule catabolic process; GO:0030244,cellulose biosynthetic process; GO:0006032,chitin catabolic process; GO:0009873,ethylene-activated signaling pathway; GO:0009825,multidimensional cell growth; GO:0010337,regulation of salicylic acid metabolic process; GO:0009735,response to cytokinin; GO:0009408,response to heat; GO:0010167,response to nitrate; GO:0009651,response to salt stress; GO:0009414,response to water deprivation; GO:0010053,root epidermal cell differentiation; GO:0003674,molecular_function; GO:0005488,binding; GO:0030246,carbohydrate binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0030154,cell differentiation; GO:0032502,developmental process; GO:0045165,cell fate commitment; GO:0048869,cellular developmental process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0071554,cell wall organization or biogenesis; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0016051,carbohydrate biosynthetic process; GO:0030243,cellulose metabolic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0044042,glucan metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0006022,aminoglycan metabolic process; GO:0006026,aminoglycan catabolic process; GO:0006030,chitin metabolic process; GO:0006040,amino sugar metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0046348,amino sugar catabolic process; GO:1901071,glucosamine-containing compound metabolic process; GO:1901072,glucosamine-containing compound catabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901136,carbohydrate derivative catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:0000160,phosphorelay signal transduction system; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009719,response to endogenous stimulus; GO:0009723,response to ethylene; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0016049,cell growth; GO:0040007,growth; GO:0006082,organic acid metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0009696,salicylic acid metabolic process; GO:0010565,regulation of cellular ketone metabolic process; GO:0018958,phenol-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019752,carboxylic acid metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0032787,monocarboxylic acid metabolic process; GO:0042180,cellular ketone metabolic process; GO:0042537,benzene-containing compound metabolic process; GO:0043436,oxoacid metabolic process; GO:0044281,small molecule metabolic process; GO:0062012,regulation of small molecule metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901615,organic hydroxy compound metabolic process; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009628,response to abiotic stimulus; GO:0010035,response to inorganic substance; GO:1901698,response to nitrogen compound; GO:1901700,response to oxygen-containing compound; GO:0006970,response to osmotic stress; GO:0001101,response to acid chemical; GO:0009415,response to water; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0010015,root morphogenesis; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0048364,root development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0090558,plant epidermis development; GO:0090627,plant epidermal cell differentiation; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00182.22:Chitinase class I","--","--","--"]
["MS17G17650",2.5601,1.5258,2.2253,4.4698,3.5967,4.1341,5.1083,4.8201,3.8437,3.8722,4.1459,3.4061,2.4227,3.9519,2.1661,101,60,86,129,124,137,153,135,137,124,140,136,75,122,67,1.041414681,"7.18849E-05",0.000264114,"up",0.726961948,0.025651937,0.04411054,false,1.163165977,"1.64667E-05","5.34289E-05","up",1.412484344,"4.78722E-07","1.89136E-06","up",0.381313151,0.100901087,0.198819947,false,0.698294245,0.018944362,0.069409154,false,0.245517009,0.291621554,0.737117416,false,0.13825437,0.523021262,0.700826272,false,0.460718393,0.111942234,0.34583313,false,"chr_0017",30081843,30083529,"+","MS17G17650","--","--","--","pentatricopeptide repeat-containing protein At1g62910-like isoform X3 [Malus sylvestris]","PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12775, mitochondrial; Flags: Precursor;","A0A498JXC3_MALDO RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};","FOG: PPR repeat","GO:0005739,mitochondrion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13041.9:PPR repeat family","--","--","--"]
["MS17G18750",1.2218,0.8755,0.98,2.7437,3.6949,3.844,3.1036,2.0897,3.2842,2.5803,1.0195,1.6383,2.7803,2.2305,2.3375,14,10,11,23,37,37,27,17,34,24,10,19,25,20,21,"NA","NA","NA","NA",1.548628412,0.001151713,0.002676277,"up",1.957233462,"1.53562E-05","5.00985E-05","up",1.745036161,0.000260565,0.000669644,"up",0.798504826,0.115928827,0.220847212,false,0.213854858,0.606396281,0.763840151,false,-0.213913425,0.586878327,0.887053794,false,1.016210697,0.038284317,0.112958829,false,0.43573019,0.267227063,0.556879482,false,"chr_0017",31645253,31645854,"+","MS17G18750","--","--","--","hypothetical protein C1H46_010826 [Malus baccata]","LYRM9_ARATH RecName: Full=LYR motif-containing protein At3g19508;","A0A540MXI2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE03511.1};","--","GO:0005829,cytosol; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF05347.18:Complex 1 protein (LYR family)","--","--","--"]
["MS22G00200",1.451,2.626,1.6264,0.6612,0.8465,1.7613,0.1499,0.7614,1.1652,2.4185,1.8946,2.3051,0.9427,1.9633,1.0524,51,92,56,17,26,52,4,19,37,69,57,82,26,54,29,0.404018772,0.220303676,0.307621506,false,-0.239172362,0.553299266,0.629524292,false,-0.601309719,0.188667829,0.254087804,false,-1.18510721,0.042572316,0.069658256,false,-1.570075613,0.005358578,0.018270746,"down",-0.926013674,0.140013318,0.29861954,false,-0.576521292,0.399769353,0.805556424,false,-0.986108375,0.017631462,0.062727698,false,-0.337588294,0.492691033,0.752253501,false,"scaffold5",124195,125697,"+","MS22G00200","--","K03881 NADH-ubiquinone oxidoreductase chain 4 [EC:7.1.1.2] | (RefSeq) nad4, C3258_p20; NADH dehydrogenase subunit 4 (A)","ko00190: Oxidative phosphorylation; ko01100: Metabolic pathways","NADH-plastoquinone oxidoreductase subunit 4 [Macromeles tschonoskii]","NU4C_VITVI RecName: Full=NAD(P)H-quinone oxidoreductase chain 4, chloroplastic {ECO:0000255|HAMAP-Rule:MF_00491}; EC=7.1.1.- {ECO:0000255|HAMAP-Rule:MF_00491}; AltName: Full=NAD(P)H dehydrogenase, chain 4 {ECO:0000255|HAMAP-Rule:MF_00491}; AltName: Full=NADH-plastoquinone oxidoreductase chain 4 {ECO:0000255|HAMAP-Rule:MF_00491};","A0A8K1U7C9_9ROSA SubName: Full=NADH-plastoquinone oxidoreductase subunit 4 {ECO:0000313|EMBL:UGO90715.1};","NADH dehydrogenase, subunit 4","GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0008137,NADH dehydrogenase (ubiquinone) activity; GO:0048039,ubiquinone binding; GO:0009060,aerobic respiration; GO:0042773,ATP synthesis coupled electron transport; GO:0015990,electron transport coupled proton transport; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0003954,NADH dehydrogenase activity; GO:0003955,NAD(P)H dehydrogenase (quinone) activity; GO:0005215,transporter activity; GO:0009055,electron transfer activity; GO:0015399,primary active transmembrane transporter activity; GO:0015453,oxidoreduction-driven active transmembrane transporter activity; GO:0016491,oxidoreductase activity; GO:0016651,oxidoreductase activity, acting on NAD(P)H; GO:0016655,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0050136,NADH dehydrogenase (quinone) activity; GO:0005488,binding; GO:0048038,quinone binding; GO:0006091,generation of precursor metabolites and energy; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0015980,energy derivation by oxidation of organic compounds; GO:0044237,cellular metabolic process; GO:0045333,cellular respiration; GO:0006119,oxidative phosphorylation; GO:0022900,electron transport chain; GO:0022904,respiratory electron transport chain; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0015988,energy coupled proton transmembrane transport, against electrochemical gradient; GO:0034220,ion transmembrane transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0098655,cation transmembrane transport; GO:0098660,inorganic ion transmembrane transport; GO:0098662,inorganic cation transmembrane transport; GO:1902600,proton transmembrane transport; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane","PF00361.23:Proton-conducting membrane transporter","--","--","--"]
["novel.1066",2.0194,2.118,2.455,2.6433,3.095,4.3928,2.1762,2.3963,2.8922,4.2519,4.9758,5.9979,3.1193,5.7477,5.7679,330,345,393,316,442,603,270,278,427,564,696,992,400,735,739,1.394137187,"5.90452E-16","9.72058E-15","up",1.439181381,"2.016E-09","1.12842E-08","up",0.829377041,0.000138798,0.000383509,false,0.462022223,0.00669345,0.013213679,false,-0.918613699,"1.03367E-06","9.54874E-06",false,-0.962556627,0.00017293,0.001541714,false,-0.368981669,0.10736737,0.542176034,false,-0.54672734,0.016026822,0.058215407,false,-0.585659669,0.039547144,0.182485486,false,"chr_0011",6282853,6290404,"+","--","--","K20617 cytochrome P450 family 71 subfamily A | (RefSeq) cytochrome P450 71A9-like (A)","--","hypothetical protein G4B88_009910 [Cannabis sativa]","C7317_PRUMU RecName: Full=Cytochrome P450 736A117 {ECO:0000303|PubMed:25015725}; EC=1.14.-.- {ECO:0000305};","A0A7J6DKP9_CANSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAF4346683.1};","Cytochrome P450 CYP2 subfamily","GO:0016021,integral component of membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["novel.1083",36.7122,29.5072,23.4234,6.6152,7.0653,8.2941,2.9124,4.7012,7.4806,8.3776,11.405,10.1403,3.9342,6.2377,4.9486,880,705,550,116,148,167,53,80,162,163,234,246,74,117,93,-1.404371856,"3.039E-10","2.66406E-09","down",-2.282537631,"3.88252E-20","5.91123E-19","down",-1.819550859,"1.00405E-14","1.05009E-13","down",-2.300398238,"1.13967E-12","8.61194E-12","down",-0.879812227,0.007923286,0.025404695,false,0.000404862,0.999100451,0.999578189,false,-0.478053056,0.162419892,0.617333181,false,-0.398269661,0.051039264,0.140596952,false,0.487788891,0.04831508,0.206817095,false,"chr_0011",7457080,7458104,".","--","--","--","--","hypothetical protein C1H46_027931 [Malus baccata]","--","A0A540LJH6_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD86442.1};","--","--","--","--","--","--"]
["novel.1219",0,0.1888,0.096,1.6719,0.8613,1.1201,2.3546,0.7952,1.0414,0.4636,1.0992,2.3241,0.8992,1.6833,1.5,0,4,2,26,16,20,38,12,20,8,20,50,15,28,25,"NA","NA","NA","NA",4.131693176,"2.43767E-07","1.0351E-06","up",3.890914821,"4.40546E-06","1.57396E-05","up","NA","NA","NA","NA",0.22570405,0.738453932,0.831642643,false,0.049526227,0.926781383,0.961095042,false,0.275324172,0.623110465,0.899957795,false,-0.048083902,0.939432541,0.969698249,false,-0.221190063,0.642283707,0.843935519,false,"chr_0011",25175046,25182486,"-","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["novel.1230",1.3714,1.5634,2.9908,1.8746,1.4266,1.8552,1.6421,1.1415,1.2419,3.0718,4.0054,5.2968,3.9718,4.8592,2.6237,22,25,47,22,20,25,20,13,18,40,55,86,50,61,33,1.255848676,0.001864137,0.004934794,"up",1.252596856,0.002611567,0.005659832,"up",0.016289381,0.971819764,0.978323087,false,-0.265285372,0.586611155,0.660126779,false,-1.511855464,0.000158359,0.000865232,"down",-1.504994923,0.000325251,0.002619518,"down",-0.285164957,0.523743798,0.864520016,false,-1.224240677,0.001144723,0.006969202,"down",-1.211247952,0.002014836,0.022669239,"down","chr_0011",27899269,27899954,".","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["novel.1309",0.1262,0.046,0.0234,0.4861,0.3019,0.3687,0.272,0.1939,0.2285,0.0707,0.2144,0.204,0.0731,0.0586,0.1609,11,4,2,31,23,27,18,12,18,5,16,18,5,4,11,"NA","NA","NA","NA","NA","NA","NA","NA",2.763734961,"2.44691E-05","7.6987E-05","up","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-0.661034165,0.139180461,0.592930696,false,1.280281676,0.017292051,0.061800489,false,1.925211471,0.000896908,0.012436465,"up","chr_0011",36693340,36697212,"-","--","--","--","--","cinnamoyl-CoA reductase 2-like [Malus domestica]","--","--","--","--","--","--","--","--"]
["novel.1382",1.9428,2.5117,3.0056,0.4107,0.1375,0.3338,0.0791,0.1129,0.3325,0.6662,1.3806,0.6729,0.3829,0.8447,0.4087,97,125,147,15,6,14,3,4,15,27,59,34,15,33,16,-1.279147485,0.000264618,0.000861774,"down",-1.895368229,"2.76565E-07","1.16432E-06","down",-2.887681224,"4.02379E-12","3.19863E-11","down",-3.505916076,"2.28285E-13","1.84911E-12","down",-2.236659317,0.00046103,0.002212537,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.592505705,0.004355593,0.020613909,"down","NA","NA","NA","NA","chr_0012",4763352,4768676,"-","--","--","--","--","uncharacterized protein LOC126610936 isoform X1 [Malus sylvestris]","--","A0A540KF46_MALBA RecName: Full=AB hydrolase-1 domain-containing protein {ECO:0000259|Pfam:PF12697};","Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)","--","PF12697.10:Alpha/beta hydrolase family","--","--","--"]
["novel.1498",5.0156,1.9354,1.0831,0.5714,1.2141,1.6076,0.4658,0.317,0.9964,3.7233,4.4699,3.6851,3.7285,9.0804,2.0914,156,60,33,13,33,42,11,7,28,94,119,116,91,221,51,0.737088999,0.136724391,0.207438317,false,1.167219449,0.170338282,0.232757301,false,-1.044119631,0.089210279,0.132714883,false,-1.908783426,0.00272791,0.005841875,"down",-2.607505642,"1.1877E-10","2.22105E-09","down",-3.055177996,"1.39825E-07","3.15867E-06","down",-0.860896545,0.148774079,0.603308398,false,-1.755954861,"2.57546E-06","3.79593E-05","down",-2.185388569,"8.95678E-05",0.002015129,"down","chr_0012",14459952,14465087,"-","--","--","--","--","GDSL esterase/lipase 1-like [Malus sylvestris]","GLIP1_ARATH RecName: Full=GDSL esterase/lipase 1 {ECO:0000303|PubMed:16126835}; EC=3.1.1.- {ECO:0000305}; AltName: Full=Extracellular lipase 1; Flags: Precursor;","A0A540NFC6_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE09731.1};","--","GO:0005615,extracellular space; GO:0016298,lipase activity; GO:0042742,defense response to bacterium; GO:0050832,defense response to fungus; GO:0009866,induced systemic resistance, ethylene mediated signaling pathway; GO:0009871,jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; GO:0016042,lipid catabolic process; GO:0009620,response to fungus; GO:0009751,response to salicylic acid; GO:0009627,systemic acquired resistance; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0000160,phosphorelay signal transduction system; GO:0002218,activation of innate immune response; GO:0002252,immune effector process; GO:0002253,activation of immune response; GO:0002376,immune system process; GO:0002682,regulation of immune system process; GO:0002684,positive regulation of immune system process; GO:0002831,regulation of response to biotic stimulus; GO:0002833,positive regulation of response to biotic stimulus; GO:0006955,immune response; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009682,induced systemic resistance; GO:0009719,response to endogenous stimulus; GO:0009723,response to ethylene; GO:0009725,response to hormone; GO:0009755,hormone-mediated signaling pathway; GO:0009873,ethylene-activated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0031347,regulation of defense response; GO:0031349,positive regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0032103,positive regulation of response to external stimulus; GO:0032870,cellular response to hormone stimulus; GO:0035556,intracellular signal transduction; GO:0042221,response to chemical; GO:0045087,innate immune response; GO:0045088,regulation of innate immune response; GO:0045089,positive regulation of innate immune response; GO:0048518,positive regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050776,regulation of immune response; GO:0050778,positive regulation of immune response; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071369,cellular response to ethylene stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0080134,regulation of response to stress; GO:0009611,response to wounding; GO:0009861,jasmonic acid and ethylene-dependent systemic resistance; GO:0006629,lipid metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0014070,response to organic cyclic compound; GO:1901700,response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF00657.25:GDSL-like Lipase/Acylhydrolase","--","--","--"]
["novel.1577",6.4435,4.7667,10.6972,0.4449,0.5958,0.0775,0.2572,0.1834,0.072,2.8065,0.4562,1.4148,1.41,0.2495,0.8302,99,73,161,5,8,1,3,2,1,35,6,22,17,3,10,-2.013771724,0.000414035,0.001290038,"down",-2.830368698,"6.11509E-08","2.83098E-07","down",-4.05734915,"1.1503E-11","8.72938E-11","down",-5.168925622,"4.19175E-13","3.30694E-12","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0012",25797730,25798386,".","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["novel.1656",1.0419,1.3634,1.4798,0.6811,0.9849,1.6178,0,0.8933,0.7521,1.0045,2.0639,1.9246,0.1732,0.4052,0.1733,23,30,32,11,19,30,0,14,15,18,39,43,3,7,3,0.546840958,0.180714318,0.26158652,false,-2.076734861,0.000835823,0.002000787,"down",-0.028001685,0.952341146,0.963173861,false,-0.960664966,0.227655358,0.299639292,false,-1.486711047,0.07193912,0.153140186,false,"NA","NA","NA","NA","NA","NA","NA","NA",-0.557630309,0.262290201,0.447274391,false,"NA","NA","NA","NA","chr_0012",32572681,32573624,".","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["novel.1760",3.2084,3.6211,0.8188,0.0685,0,0.5371,0,1.2711,0.2774,0.247,0.2928,0.3467,0.0639,0,0,64,72,16,1,0,9,0,18,5,4,5,7,1,0,0,-2.927631812,"2.15493E-05","8.74248E-05","down",-6.516871733,"1.18773E-06","4.58829E-06","down",-3.484883012,0.000303918,0.000787517,"down",-2.033896658,0.031987795,0.054054922,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0013",15070749,15071601,".","--","--","--","--","protein PELPK1-like [Malus domestica]","--","A0A540LY03_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD91375.1};","--","--","--","--","--","--"]
["novel.1848",4.328,5.3511,3.8581,1.8332,1.6043,2.7576,0.6825,1.1162,1.9229,1.3893,2.2789,1.4154,1.3983,2.2201,1.0885,142,175,124,44,46,76,17,26,57,37,64,47,36,57,28,-1.23730667,"2.0017E-05","8.16006E-05","down",-1.234764459,0.000108525,0.000305491,"down",-0.923360175,0.001684125,0.003777644,false,-1.583383741,"1.89551E-05","5.91044E-05","down",-0.336117438,0.456321964,0.605516033,false,-0.334473783,0.477141912,0.663348311,false,-0.658157635,0.132844414,0.584168003,false,0.327245606,0.362521305,0.553571398,false,0.334979702,0.383370263,0.667897986,false,"chr_0013",24343179,24344581,".","--","--","--","--","hypothetical protein D8674_031472 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5F429_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2596022.1};","--","--","--","--","--","--"]
["novel.1927",2.0468,1.4293,1.0652,2.2493,2.0895,2.6517,2.5374,2.1199,3.2872,0.8405,0.7502,1.1301,1.3042,1.436,1.0494,102,71,52,82,91,111,96,75,148,34,32,57,51,56,41,-0.552233087,0.133269754,0.203023739,false,0.026154796,0.938863854,0.95400591,false,0.827834716,0.008743518,0.016890487,false,1.08031431,0.000776728,0.00184066,"up",1.647252333,"6.34812E-08","7.5104E-07","up",1.072455186,0.00016434,0.001477035,"up",0.254557691,0.31188972,0.75285985,false,1.396508517,"1.62196E-06","2.52823E-05","up",0.826964532,0.001960303,0.022150708,false,"chr_0013",30257702,30288864,"+","--","--","K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1-like (A)","ko04626: Plant-pathogen interaction","disease resistance protein RPM1-like isoform X4 [Malus sylvestris]","RPM1_ARATH RecName: Full=Disease resistance protein RPM1 {ECO:0000303|PubMed:7638602}; AltName: Full=Resistance to Pseudomonas syringae protein 3 {ECO:0000303|PubMed:9861059}; AltName: Full=Resistance to Pseudomonas syringae pv. Maculicola protein 1 {ECO:0000303|PubMed:7638602};","A0A5N5F735_9ROSA SubName: Full=Disease resistance protein RPM1-like {ECO:0000313|EMBL:KAB2598563.1};","Apoptotic ATPase","GO:0012505,endomembrane system; GO:0019897,extrinsic component of plasma membrane; GO:0005886,plasma membrane; GO:0043531,ADP binding; GO:0005524,ATP binding; GO:0000166,nucleotide binding; GO:0009626,plant-type hypersensitive response; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0002376,immune system process; GO:0006950,response to stress; GO:0006952,defense response; GO:0006955,immune response; GO:0008150,biological_process; GO:0008219,cell death; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009987,cellular process; GO:0012501,programmed cell death; GO:0033554,cellular response to stress; GO:0034050,programmed cell death induced by symbiont; GO:0043207,response to external biotic stimulus; GO:0044403,biological process involved in symbiotic interaction; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0045087,innate immune response; GO:0050896,response to stimulus; GO:0051702,biological process involved in interaction with symbiont; GO:0051707,response to other organism; GO:0051716,cellular response to stimulus; GO:0098542,defense response to other organism; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0019898,extrinsic component of membrane; GO:0071944,cell periphery","PF00931.25:NB-ARC domain","--","--","--"]
["novel.1980",69.5322,103.775,54.9719,0.3158,0.8224,0.8861,0.2367,0.3977,0.7103,10.3402,7.0469,3.9563,0.7523,2.3945,2.7173,2709,4030,2098,9,28,29,7,11,25,327,235,156,23,73,83,-3.225025125,"4.70326E-19","1.028E-17","down",-5.004240005,"7.72064E-19","1.07164E-17","down",-6.594224713,"2.43718E-71","5.62743E-69","down",-7.114300253,"7.95569E-81","1.49799E-78","down",-3.88384866,"9.44371E-16","3.26745E-14","down",-2.10693879,0.000217947,0.001865528,"down",-0.52875238,0.394145931,0.802908448,false,-3.357007076,"1.39843E-12","7.93943E-11","down",-1.57202557,0.005081805,0.044107806,"down","chr_0013",33328562,33330227,".","--","--","--","--","hypothetical protein C1H46_019814 [Malus baccata]","--","A0A540M7U8_MALBA RecName: Full=DUF4219 domain-containing protein {ECO:0000259|Pfam:PF13961};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","--","PF13961.9:Domain of unknown function (DUF4219)","--","--","--"]
["novel.1998",3.7011,1.565,1.1866,2.3833,1.4001,1.2745,1.4907,2.2405,1.9298,0.9421,0.679,0.8462,0.7016,0.7818,0.5852,121,51,38,57,40,35,37,52,57,25,19,28,18,20,15,-1.204182974,0.017020162,0.03490858,"down",-1.358399498,0.007314948,0.014345768,"down",-0.145097532,0.776748309,0.822416647,false,0.083993086,0.857547446,0.891257775,false,1.304273552,0.000424939,0.002064095,"up",1.456809913,0.000150156,0.001374547,"up",0.233129959,0.540907696,0.870814667,false,1.075677486,0.011774418,0.045773815,"up",1.233852345,0.004333913,0.039425723,"up","chr_0014",380214,381828,"-","--","--","K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1-like (A)","ko04626: Plant-pathogen interaction","LOW QUALITY PROTEIN: uncharacterized protein LOC103449406 [Malus domestica]","POLR1_ARATH RecName: Full=Retrovirus-related Pol polyprotein from transposon RE1; AltName: Full=Retro element 1 {ECO:0000303|PubMed:10689195}; Short=AtRE1 {ECO:0000303|PubMed:10689195}; Includes: RecName: Full=Protease RE1; EC=3.4.23.-; Includes: RecName: Full=Reverse transcriptase RE1; EC=2.7.7.49; Includes: RecName: Full=Endonuclease RE1;","A0A5N5GPG8_9ROSA RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0004190,aspartic-type endopeptidase activity; GO:0004519,endonuclease activity; GO:0046872,metal ion binding; GO:0003676,nucleic acid binding; GO:0003964,RNA-directed DNA polymerase activity; GO:0015074,DNA integration; GO:0006310,DNA recombination; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0004518,nuclease activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034061,DNA polymerase activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0019538,protein metabolic process; GO:1901564,organonitrogen compound metabolic process","PF03222.16:Tryptophan/tyrosine permease family","--","--","--"]
["novel.2096",1.1889,0.9845,1.0788,5.8815,5.5929,6.7622,4.0764,3.9607,4.3655,8.602,7.7604,14.525,5.9399,9.5499,6.8117,63,52,56,228,259,301,164,149,209,370,352,779,247,396,283,3.434771451,"3.52447E-32","1.97631E-30","up",3.066843924,"1.65473E-35","6.74146E-34","up",2.698854647,"3.83228E-38","2.13361E-36","up",2.213408337,"3.68214E-24","6.53602E-23","up",-1.206958378,"8.58157E-06","6.44207E-05","down",-0.838823761,0.000189394,0.00166279,false,-0.486917375,0.004457178,0.133020711,false,-0.71650817,0.007904255,0.033409482,false,-0.343403623,0.123594377,0.365697061,false,"chr_0014",11556696,11559168,"-","--","--","K15102 solute carrier family 25 (mitochondrial phosphate transporter), member 3 | (RefSeq) mitochondrial phosphate carrier protein 3, mitochondrial-like (A)","--","hypothetical protein DVH24_021370 [Malus domestica]","--","A0A498JUN2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH99568.1};","--","--","--","--","--","--"]
["novel.2166",1.8038,1.7784,1.6509,0.3188,0.2669,0.1111,0.1434,0.3285,0.3786,0.8812,0.2362,0.3534,0.1585,0.4769,0.1983,116,114,104,15,15,6,7,15,22,46,13,23,8,24,10,-1.631868241,0.000456068,0.001404905,"down",-2.362350345,"3.25803E-09","1.77223E-08","down",-2.698751852,"2.2174E-11","1.6308E-10","down",-2.334779182,"3.32919E-10","1.95313E-09","down",-0.700183264,0.290927652,0.43967285,false,0.037498251,0.953702352,0.976172702,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0014",22828302,22831051,".","--","--","K13416 brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) LOW QUALITY PROTEIN: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction; ko04626: Plant-pathogen interaction","L-type lectin-domain containing receptor kinase S.4-like [Malus domestica]","LRKS4_ARATH RecName: Full=L-type lectin-domain containing receptor kinase S.4 {ECO:0000303|PubMed:19773388}; Short=LecRK-S.4 {ECO:0000303|PubMed:19773388}; EC=2.7.11.1 {ECO:0000255|PROSITE-ProRule:PRU00159}; Flags: Precursor;","A0A498IG42_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0030246,carbohydrate binding; GO:0106310,protein serine kinase activity; GO:0004675,transmembrane receptor protein serine/threonine kinase activity; GO:0042742,defense response to bacterium; GO:0002229,defense response to oomycetes; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0004674,protein serine/threonine kinase activity; GO:0004888,transmembrane signaling receptor activity; GO:0019199,transmembrane receptor protein kinase activity; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0002239,response to oomycetes; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00139.22:Legume lectin domain","--","--","--"]
["novel.2253",1.262,0.7791,1.5856,0.199,0.2777,0.3467,0.2557,0.2735,0.2686,0,0.2268,0.1439,0.1237,0.062,0.1238,26,16,32,3,5,6,4,4,5,0,4,3,2,1,2,-3.088352832,0.000141747,0.00049187,"down",-3.252785586,0.000129622,0.000359597,"down",-1.912793964,0.003218374,0.006823925,"down",-1.899164543,0.003624951,0.007572663,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0014",29014183,29015063,".","--","--","--","--","hypothetical protein DVH24_036508 [Malus domestica]","--","A0A498IJA9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH82167.1};","--","--","PF01535.23:PPR repeat","--","--","--"]
["novel.2324",14.1961,17.6002,12.9898,5.167,9.0798,3.5724,4.4087,7.8442,4.5351,10.9486,3.7418,4.5901,4.5227,5.6048,6.2564,492,608,441,131,275,104,116,193,142,308,111,161,123,152,170,-1.008228898,0.011033339,0.023940538,"down",-1.162565179,"1.4118E-08","7.09192E-08","down",-1.096538793,0.002396104,0.005212177,"down",-1.131117521,"6.66761E-05",0.000190439,"down",-0.105153756,0.817109294,0.886213074,false,0.046299197,0.875147371,0.93314658,false,-0.038376048,0.927538258,0.982465639,false,-0.065867809,0.895546262,0.944743051,false,0.095095616,0.799141019,0.922771383,false,"chr_0014",32831579,32833060,".","--","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) probable serine/threonine-protein kinase PBL7 isoform X2 (A)","ko04626: Plant-pathogen interaction","receptor-like protein kinase FERONIA [Malus domestica]","FERON_ARATH RecName: Full=Receptor-like protein kinase FERONIA; EC=2.7.11.1; AltName: Full=Protein SIRENE; Flags: Precursor;","G0XZB4_MALDO SubName: Full=Putative serine/threonine kinase {ECO:0000313|EMBL:AEJ72551.1};","Serine/threonine protein kinase","GO:0043680,filiform apparatus; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0009506,plasmodesma; GO:0005524,ATP binding; GO:0004672,protein kinase activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004714,transmembrane receptor protein tyrosine kinase activity; GO:0009738,abscisic acid-activated signaling pathway; GO:0009742,brassinosteroid mediated signaling pathway; GO:0032922,circadian regulation of gene expression; GO:0050832,defense response to fungus; GO:0009873,ethylene-activated signaling pathway; GO:0009788,negative regulation of abscisic acid-activated signaling pathway; GO:0030308,negative regulation of cell growth; GO:0010483,pollen tube reception; GO:0009791,post-embryonic development; GO:0046777,protein autophosphorylation; GO:0009741,response to brassinosteroid; GO:0009723,response to ethylene; GO:0048364,root development; GO:0010118,stomatal movement; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0004713,protein tyrosine kinase activity; GO:0004888,transmembrane signaling receptor activity; GO:0019199,transmembrane receptor protein kinase activity; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009737,response to abscisic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071215,cellular response to abscisic acid stimulus; GO:0071310,cellular response to organic substance; GO:0071396,cellular response to lipid; GO:0071495,cellular response to endogenous stimulus; GO:0097305,response to alcohol; GO:0097306,cellular response to alcohol; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0014070,response to organic cyclic compound; GO:0043401,steroid hormone mediated signaling pathway; GO:0048545,response to steroid hormone; GO:0071367,cellular response to brassinosteroid stimulus; GO:0071383,cellular response to steroid hormone stimulus; GO:0071407,cellular response to organic cyclic compound; GO:0007623,circadian rhythm; GO:0008152,metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0019222,regulation of metabolic process; GO:0032501,multicellular organismal process; GO:0043170,macromolecule metabolic process; GO:0048511,rhythmic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0000160,phosphorelay signal transduction system; GO:0035556,intracellular signal transduction; GO:0071369,cellular response to ethylene stimulus; GO:0009787,regulation of abscisic acid-activated signaling pathway; GO:0009966,regulation of signal transduction; GO:0009968,negative regulation of signal transduction; GO:0010646,regulation of cell communication; GO:0010648,negative regulation of cell communication; GO:0023051,regulation of signaling; GO:0023057,negative regulation of signaling; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0048583,regulation of response to stimulus; GO:0048585,negative regulation of response to stimulus; GO:1901419,regulation of response to alcohol; GO:1901420,negative regulation of response to alcohol; GO:1905957,regulation of cellular response to alcohol; GO:1905958,negative regulation of cellular response to alcohol; GO:0001558,regulation of cell growth; GO:0016043,cellular component organization; GO:0016049,cell growth; GO:0040007,growth; GO:0040008,regulation of growth; GO:0045926,negative regulation of growth; GO:0051128,regulation of cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0000003,reproduction; GO:0009856,pollination; GO:0022414,reproductive process; GO:0044706,multi-multicellular organism process; GO:0051703,biological process involved in intraspecies interaction between organisms; GO:0007275,multicellular organism development; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0022622,root system development; GO:0048731,system development; GO:0099402,plant organ development; GO:0005575,cellular_component; GO:0005618,cell wall; GO:0030312,external encapsulating structure; GO:0071944,cell periphery; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["novel.240",0.3106,0.3355,0.1463,0.7837,0.4374,0.7394,0.8811,0.774,0.9784,0.4415,0.5024,0.5193,0.4262,0.519,0.4571,13,14,6,24,16,26,28,23,37,15,18,22,14,17,15,"NA","NA","NA","NA","NA","NA","NA","NA",1.504127745,0.00652272,0.012981808,"up",2.008639871,"3.75478E-05",0.00011159,"up",0.957064276,0.017638585,0.049198175,false,0.916951202,0.029044931,0.096354088,false,0.507335525,0.216438168,0.674194484,false,0.453921182,0.327217245,0.518483906,false,0.418397033,0.372407304,0.658147517,false,"chr_001",17186478,17188738,"+","--","--","K09419 heat shock transcription factor, other eukaryote | (RefSeq) heat stress transcription factor A-2-like (A)","--","heat stress transcription factor A-2-like [Malus domestica]","HSF30_SOLPE RecName: Full=Heat shock factor protein HSF30; AltName: Full=Heat shock transcription factor 30; Short=HSTF 30; AltName: Full=Heat stress transcription factor;","A0A498HXN5_MALDO RecName: Full=HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434};","Heat shock transcription factor","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0043565,sequence-specific DNA binding; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00447.20:HSF-type DNA-binding","HSF","TF","HSF"]
["novel.2544",0.4408,0.2862,0.3706,8.862,28.2495,7.3165,14.8923,21.7339,13.4617,29.0402,11.1186,23.2395,17.779,16.2382,19.5807,17,11,14,250,952,237,436,595,469,909,367,907,538,490,592,6.05550547,"4.31918E-47","5.14114E-45","up",5.901785959,"1.2925E-99","4.54485E-97","up",5.583184589,"2.2784E-24","5.42481E-23","up",5.801638226,"1.28174E-64","1.41754E-62","up",-0.238099535,0.5202569420000001,0.662234213,false,-0.086740747,0.707434472,0.833828788,false,0.20846028,0.676705804,0.916139195,false,-0.446072521,0.554263331,0.725397565,false,-0.286570272,0.541168481,0.785815896,false,"chr_0015",23799899,23802452,"-","--","--","--","--","patatin-like protein 2 [Malus domestica]","PLP2_ARATH RecName: Full=Patatin-like protein 2; Short=AtPLP2; EC=3.1.1.-; AltName: Full=Patatin-related phospholipase A IIalpha; Short=pPLAIIa; AltName: Full=Phospholipase A IIA; Short=AtPLAIIA;","A0A540KGK0_MALBA RecName: Full=Patatin {ECO:0000256|RuleBase:RU361262}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361262};","Ca2+-independent phospholipase A2","GO:0005737,cytoplasm; GO:0016020,membrane; GO:0005777,peroxisome; GO:0047372,acylglycerol lipase activity; GO:0042802,identical protein binding; GO:0016298,lipase activity; GO:0004620,phospholipase activity; GO:0071456,cellular response to hypoxia; GO:0051607,defense response to virus; GO:0016042,lipid catabolic process; GO:0006629,lipid metabolic process; GO:0031408,oxylipin biosynthetic process; GO:0009626,plant-type hypersensitive response; GO:0046686,response to cadmium ion; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0052689,carboxylic ester hydrolase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009615,response to virus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0140546,defense response to symbiont; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0006082,organic acid metabolic process; GO:0009058,biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0031407,oxylipin metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0012501,programmed cell death; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0042579,microbody; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01734.25:Patatin-like phospholipase","--","--","--"]
["novel.2619",9.8284,12.6482,13.3427,26.3077,20.0792,19.8483,23.8582,20.0055,17.7705,22.3785,19.0573,18.4055,17.312,21.5035,21.0027,191,245,254,374,341,324,352,276,312,353,317,362,264,327,320,0.932347983,"2.54042E-06","1.23271E-05",false,1.032754248,"1.74783E-08","8.66055E-08","up",1.104253098,"3.68698E-07","1.54589E-06","up",1.07194721,"6.56739E-07","2.5407E-06","up",0.151190108,0.472277985,0.620199179,false,0.052510641,0.790702549,0.88412104,false,-0.035457628,0.873999984,0.971155202,false,0.188980657,0.375933167,0.566223527,false,0.096089514,0.631620106,0.838911596,false,"chr_0015",27668733,27669563,".","--","--","--","--","uncharacterized protein LOC103410594 [Malus domestica]","--","A0A498J7H8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH91440.1};","--","--","PF12023.11:Domain of unknown function (DUF3511)","--","--","--"]
["novel.2705",1.4308,1.2723,1.5602,0.0445,0.5954,0.813,0.1285,0.0916,0.216,0.6009,1.2157,0.482,0.2901,0.6649,0.4562,44,39,47,1,16,21,3,2,6,15,32,15,7,16,11,-0.720027512,0.099794077,0.159388973,false,-1.30475522,0.003548723,0.007467842,"down",-1.33227099,0.047584526,0.076452488,false,-2.975608861,"6.25032E-07","2.42624E-06","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-0.606623918,0.462144412,0.647718644,false,"NA","NA","NA","NA","chr_0015",32187704,32189316,"+","--","--","--","--","thaumatin-like protein 1 [Malus domestica]","THLP1_ARATH RecName: Full=Thaumatin-like protein 1 {ECO:0000303|PubMed:15988566}; Short=AtTLP1 {ECO:0000303|PubMed:15988566}; Flags: Precursor;","A0A5N5HK99_9ROSA SubName: Full=Thaumatin-like protein 1b {ECO:0000313|EMBL:KAB2628255.1};","--","GO:0006952,defense response; GO:0009617,response to bacterium; GO:0009723,response to ethylene; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical","PF00314.20:Thaumatin family","--","--","--"]
["novel.2775",139.0145,172.5638,194.1809,164.4419,72.9411,114.0496,108.3701,96.5017,161.4446,53.8294,74.3768,63.0875,78.2793,71.3194,64.9335,5221,6460,7144,4518,2394,3598,3090,2573,5478,1641,2391,2398,2307,2096,1912,-1.218590414,"4.40156E-13","5.34609E-12","down",-0.939998192,"6.48232E-09","3.39062E-08",false,-0.312672625,0.278566215,0.354861572,false,-0.18895979,0.373011359,0.454947849,false,1.042819225,"1.38158E-06","1.24825E-05","up",0.768825262,0.000235773,0.001992228,false,0.126613784,0.680832936,0.917101877,false,0.920127424,0.001261125,0.007562222,false,0.650512643,0.018741765,0.111295712,false,"chr_0016",4367515,4369699,"+","--","--","K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein HAT5 (A)","--","homeobox-leucine zipper protein HAT5-like [Malus domestica]","HOX13_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX13; AltName: Full=HD-ZIP protein HOX13; AltName: Full=Homeodomain transcription factor HOX13; AltName: Full=OsHox13;","A0A498HX63_MALDO RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};","Transcription factor HEX, contains HOX and HALZ domains","GO:0005634,nucleus; GO:0000981,DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0043565,sequence-specific DNA binding; GO:0003674,molecular_function; GO:0003700,DNA-binding transcription factor activity; GO:0140110,transcription regulator activity; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00046.32:Homeodomain","HB-HD-ZIP","TF","HB->HB-HD-ZIP"]
["novel.2869",1.0064,1.246,1.8362,1.5513,1.4457,1.8099,1.8333,1.1462,2.0383,2.0577,3.2021,2.8139,2.4559,1.9702,2.8677,47,58,84,53,59,71,65,38,86,78,128,133,90,72,105,1.167967442,"9.77349E-05",0.000350505,"up",1.133354197,0.000171778,0.000466858,"up",0.450349881,0.156827425,0.216703548,false,0.583484655,0.091718393,0.137096025,false,-0.571530699,0.059350098,0.13133122,false,-0.53206822,0.079941262,0.201094469,false,0.132446988,0.667711873,0.914427045,false,-0.702095773,0.008985708,0.036999898,false,-0.657191728,0.01488219,0.094524414,false,"chr_0016",13496546,13500608,"+","--","--","K05666 ATP-binding cassette, subfamily C (CFTR/MRP), member 2 | (RefSeq) LOW QUALITY PROTEIN: ABC transporter C family member 10-like (A)","ko02010: ABC transporters","ABC transporter C family member 10-like [Malus sylvestris]","AB10C_ARATH RecName: Full=ABC transporter C family member 10; Short=ABC transporter ABCC.10; Short=AtABCC10; EC=7.6.2.2; AltName: Full=ATP-energized glutathione S-conjugate pump 14; AltName: Full=Glutathione S-conjugate-transporting ATPase 14; AltName: Full=Multidrug resistance-associated protein 14;","A0A540LK77_MALBA RecName: Full=ABC-type xenobiotic transporter {ECO:0000256|ARBA:ARBA00012191}; EC=7.6.2.2 {ECO:0000256|ARBA:ARBA00012191};","Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily","GO:0005829,cytosol; GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0000325,plant-type vacuole; GO:0008559,ABC-type xenobiotic transporter activity; GO:0005524,ATP binding; GO:0042626,ATPase-coupled transmembrane transporter activity; GO:0055085,transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015399,primary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0042910,xenobiotic transmembrane transporter activity; GO:0140359,ABC-type transporter activity; GO:0140657,ATP-dependent activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006810,transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF00005.30:ABC transporter","--","--","--"]
["novel.2877",30.9787,18.0271,15.1356,30.4013,23.7076,36.8799,37.3125,140.3152,90.0977,173.9511,70.1474,25.3702,43.4196,41.0947,19.7877,631,366,302,453,422,631,577,2029,1658,2876,1223,523,694,655,316,2.281463639,0.005029937,0.011973551,"up",0.991921379,0.004501245,0.009252785,false,0.704844512,0.021873424,0.038394826,false,2.340149948,"5.5505E-08","2.46938E-07","up",0.075410556,0.933057782,0.959980738,false,1.364160007,0.001671266,0.010128987,"up",1.63903145,"7.39084E-05",0.011580106,"up",-1.559466736,0.036973915,0.109845999,false,-0.262495684,0.40154259,0.683035742,false,"chr_0016",14317208,14318078,".","--","--","--","--","late embryogenesis abundant protein At1g64065-like [Malus sylvestris]","Y1465_ARATH RecName: Full=Late embryogenesis abundant protein At1g64065 {ECO:0000305};","A0A5N5I136_9ROSA RecName: Full=LEA_2 domain-containing protein {ECO:0000259|Pfam:PF03168};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF03168.16:Late embryogenesis abundant protein","--","--","--"]
["novel.2968",7.4301,6.2672,6.2992,0.8348,1.1501,1.1966,0.5027,0.7348,0.859,1.8966,2.9579,2.9291,1.443,1.0243,1.2495,584,491,485,48,79,79,30,41,61,121,199,233,89,63,77,-1.180002155,"8.86387E-09","6.32086E-08","down",-2.134817613,"8.65387E-25","1.82709E-23","down",-2.433754968,"1.86464E-28","5.86486E-27","down",-2.970437326,"1.49712E-35","5.11359E-34","down",-1.777406828,"2.62137E-09","3.98196E-08","down",-0.821206387,0.009542229,0.040958912,false,-0.538068076,0.105895526,0.540272898,false,-1.23676299,"8.33349E-06",0.000105608,"down",-0.274608778,0.343422223,0.632406137,false,"chr_0016",27176354,27180296,"-","--","--","K03070 preprotein translocase subunit SecA [EC:7.4.2.8] | (RefSeq) LOW QUALITY PROTEIN: protein translocase subunit SECA2, chloroplastic (A)","ko03060: Protein export","transposable element gene [Prunus dulcis]","--","A0A5H2XH13_PRUDU RecName: Full=RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00012493}; EC=2.7.7.49 {ECO:0000256|ARBA:ARBA00012493};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0003676,nucleic acid binding; GO:0015074,DNA integration; GO:0003674,molecular_function; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process","--","--","--","--"]
["novel.3092",0.7775,0.78,1.3096,4.0918,2.1797,3.4247,0.5632,2.026,4.604,1.9157,2.5887,2.4198,0.5449,1.1426,0.8925,20,20,33,77,49,74,11,37,107,40,57,63,11,23,18,1.46110473,"4.90815E-05",0.000186308,"up",0.141823746,0.769558697,0.819676724,false,1.968714354,"5.3362E-07","2.1875E-06","up",1.594536465,0.01222851,0.022830133,"up",0.152119853,0.801964266,0.876648847,false,1.474632552,0.025495055,0.087323207,false,-0.368267739,0.546615175,0.873165734,false,0.52189947,0.114680818,0.253855613,false,1.849974242,"8.44384E-06",0.000293659,"up","chr_0017",4393775,4396100,"+","--","--","--","--","hypothetical protein DVH24_015092 [Malus domestica]","--","A0A498K7X9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI01743.1};","--","GO:0003676,nucleic acid binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding","--","--","--","--"]
["novel.3127",0.0446,0.2237,1.0014,1.28,0.8164,0.5839,1.2334,0.1884,0.5923,2.7467,1.9275,2.5994,3.1253,2.4503,0.91,1,5,22,21,16,11,21,3,12,50,37,59,55,43,16,2.732361161,0.000206677,0.000690661,"up",2.67584328,0.000778927,0.001875532,"up","NA","NA","NA","NA","NA","NA","NA","NA",-1.744830065,0.00263707,0.009995811,"down",-1.685517214,0.012393001,0.05016111,false,-0.34676822,0.630706042,0.902092832,false,-1.405321638,0.001816637,0.01021336,"down",-1.334550816,0.01911332,0.112887916,false,"chr_0017",7420857,7421853,"-","--","--","--","--","hypothetical protein DVH24_014816 [Malus domestica]","--","A0A498K252_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI01467.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","--","--","--","--"]
["novel.3227",0.0661,0.0663,0.1097,0.6327,0.8322,1.3184,0.2395,0.1513,0.6769,0.5498,0.8497,1.1596,0.4002,1.2146,0.6641,8,8,13,56,88,134,22,13,74,54,88,142,38,115,63,3.589168063,"5.3507E-16","8.86811E-15","up",3.525176281,"3.1858E-12","2.42273E-11","up",3.733607053,"8.45346E-17","1.07101E-15","up",2.412762443,0.000153561,0.000411089,"up",-1.154985262,0.030550255,0.077200475,false,-1.091813218,0.055079827,0.154242465,false,-1.314367723,0.013418589,0.234791252,false,0.162249862,0.664000414,0.804034456,false,0.232503977,0.595015858,0.818207922,false,"chr_0017",21291323,21296496,"+","--","--","--","--","hypothetical protein DVH24_031523 [Malus domestica]","--","A0A498KSD4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI10071.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.3319",4.2122,6.5628,3.9673,4.1081,7.6236,7.9744,4.3559,5.1172,5.2768,9.3229,6.176,7.4891,6.9059,9.4548,11.4994,349,542,322,249,552,555,274,301,395,627,438,628,449,613,747,0.834054143,0.002084915,0.005447508,false,1.20396894,"2.84106E-06","1.036E-05","up",0.629518524,0.048021431,0.077075458,false,0.279316449,0.2516072,0.326171694,false,-0.538818987,0.015922082,0.045169545,false,-0.908312127,"2.62868E-05",0.000311136,false,-0.3533349,0.209584086,0.666653152,false,-0.184159833,0.545462646,0.718314103,false,-0.547390876,0.066528522,0.253493158,false,"chr_0017",30186185,30189727,".","--","--","K13466 EIX receptor 1/2 | (RefSeq) receptor-like protein EIX2 (A)","ko04626: Plant-pathogen interaction","receptor-like protein EIX2 [Pyrus x bretschneideri]","EIX2_SOLLC RecName: Full=Receptor-like protein EIX2 {ECO:0000305}; AltName: Full=EIX receptor 2 {ECO:0000312|EMBL:AAR28378.1}; Flags: Precursor;","A0A540LHV6_MALBA RecName: Full=LRRNT_2 domain-containing protein {ECO:0000259|Pfam:PF08263};","FOG: Leucine rich repeat","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0050832,defense response to fungus; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF13855.9:Leucine rich repeat","--","--","--"]
["novel.3402",3.0036,4.9165,3.7924,7.4553,5.4268,7.5279,7.2878,4.5649,7.6115,2.9213,6.3717,3.5144,4.1298,5.0505,2.8228,38,62,47,69,60,80,70,41,87,30,69,45,41,50,28,0.303060117,0.437748794,0.537910717,false,0.328927324,0.364953909,0.445789819,false,1.009345352,0.001391906,0.003178176,"up",1.015038469,0.002606723,0.00560211,"up",0.721816874,0.0614697,0.135168624,false,0.702122094,0.047479455,0.138163526,false,0.00601514,0.984202537,0.995140998,false,0.719983385,0.050482362,0.139523203,false,0.705719963,0.032469988,0.160947564,false,"chr_002",4950917,4951457,".","--","--","K18752 transportin-1 | (RefSeq) transportin-1-like (A)","ko03013: Nucleocytoplasmic transport","hypothetical protein C1H46_044909 [Malus baccata]","TNPO1_ARATH RecName: Full=Transportin-1; Short=AtTRN1; AltName: Full=Importin beta-2; AltName: Full=Karyopherin beta-2;","A0A540K5Q2_MALBA RecName: Full=Importin N-terminal domain-containing protein {ECO:0000259|PROSITE:PS50166};","Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily)","GO:0005737,cytoplasm; GO:0005654,nucleoplasm; GO:0005634,nucleus; GO:0061608,nuclear import signal receptor activity; GO:0008139,nuclear localization sequence binding; GO:0031267,small GTPase binding; GO:0051170,import into nucleus; GO:0006606,protein import into nucleus; GO:0070922,RISC complex assembly; GO:0003674,molecular_function; GO:0140104,molecular carrier activity; GO:0140142,nucleocytoplasmic carrier activity; GO:0005048,signal sequence binding; GO:0005488,binding; GO:0033218,amide binding; GO:0042277,peptide binding; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0051020,GTPase binding; GO:0006810,transport; GO:0006913,nucleocytoplasmic transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0046907,intracellular transport; GO:0051169,nuclear transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0006886,intracellular protein transport; GO:0008104,protein localization; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0033365,protein localization to organelle; GO:0034504,protein localization to nucleus; GO:0045184,establishment of protein localization; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0072594,establishment of protein localization to organelle; GO:0008152,metabolic process; GO:0009892,negative regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010605,negative regulation of macromolecule metabolic process; GO:0010629,negative regulation of gene expression; GO:0016043,cellular component organization; GO:0019222,regulation of metabolic process; GO:0022607,cellular component assembly; GO:0022613,ribonucleoprotein complex biogenesis; GO:0022618,ribonucleoprotein complex assembly; GO:0031047,gene silencing by RNA; GO:0043170,macromolecule metabolic process; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0048519,negative regulation of biological process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065003,protein-containing complex assembly; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0071826,ribonucleoprotein complex subunit organization; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen","--","--","--","--"]
["novel.3474",2.1929,3.08,3.19,0.8243,1.0665,0.8485,0.1444,1.5445,0.9102,1.2833,1.9215,1.6792,1.4671,0.6305,1.2586,40,56,57,11,17,13,2,20,15,19,30,31,21,9,18,-0.606333981,0.085783231,0.140007746,false,-1.036038549,0.01580337,0.028688105,"down",-1.402919181,0.000761811,0.001829355,"down",-1.423848455,0.02024479,0.035924992,"down",-0.799492098,0.248323066,0.392491933,false,-0.368786605,0.625167951,0.776772302,false,"NA","NA","NA","NA",-0.778149737,0.097430265,0.226515393,false,"NA","NA","NA","NA","chr_002",18705670,18711755,"+","--","--","--","--","hypothetical protein C1H46_030392 [Malus baccata]","--","A0A540LCB1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD84070.1};","--","--","--","--","--","--"]
["novel.3590",4.971,3.4069,3.6947,0.5192,0.4857,0.9841,0.3384,0.4563,0.408,1.7478,2.5449,1.6998,0.968,1.5989,1.2681,445,304,324,34,38,74,23,29,33,127,195,154,68,112,89,-0.832424261,0.000600822,0.001797261,false,-1.367531735,"7.00379E-08","3.21628E-07","down",-2.399148898,"2.68601E-14","2.6956E-13","down",-3.04999795,"5.35016E-27","1.12645E-25","down",-2.20521569,"4.52939E-13","1.18582E-11","down",-1.666549697,"3.49983E-07","7.19012E-06","down",-0.647041486,0.107417803,0.542176034,false,-1.553354968,"4.30175E-06","5.95386E-05","down",-1.008600159,0.004482917,0.04033025,"down","chr_002",28891411,28895910,"+","--","--","--","--","hypothetical protein DVH24_010241 [Malus domestica]","FH1_ARATH RecName: Full=Formin-like protein 1; Short=AtFH1; Short=AtFORMIN-8; Flags: Precursor;","A0A498JS95_MALDO RecName: Full=Formin-like protein {ECO:0000256|RuleBase:RU361260};","Rho GTPase effector BNI1 and related formins","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0005886,plasma membrane; GO:0003779,actin binding; GO:0051015,actin filament binding; GO:0030036,actin cytoskeleton organization; GO:0045010,actin nucleation; GO:0051016,barbed-end actin filament capping; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0044877,protein-containing complex binding; GO:0006996,organelle organization; GO:0007010,cytoskeleton organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0030029,actin filament-based process; GO:0071840,cellular component organization or biogenesis; GO:0007015,actin filament organization; GO:0097435,supramolecular fiber organization; GO:0008064,regulation of actin polymerization or depolymerization; GO:0008154,actin polymerization or depolymerization; GO:0010639,negative regulation of organelle organization; GO:0022411,cellular component disassembly; GO:0022607,cellular component assembly; GO:0030041,actin filament polymerization; GO:0030042,actin filament depolymerization; GO:0030832,regulation of actin filament length; GO:0030833,regulation of actin filament polymerization; GO:0030834,regulation of actin filament depolymerization; GO:0030835,negative regulation of actin filament depolymerization; GO:0030837,negative regulation of actin filament polymerization; GO:0031333,negative regulation of protein-containing complex assembly; GO:0032271,regulation of protein polymerization; GO:0032272,negative regulation of protein polymerization; GO:0032535,regulation of cellular component size; GO:0032956,regulation of actin cytoskeleton organization; GO:0032970,regulation of actin filament-based process; GO:0032984,protein-containing complex disassembly; GO:0033043,regulation of organelle organization; GO:0043242,negative regulation of protein-containing complex disassembly; GO:0043244,regulation of protein-containing complex disassembly; GO:0043254,regulation of protein-containing complex assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0044087,regulation of cellular component biogenesis; GO:0048519,negative regulation of biological process; GO:0048523,negative regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051128,regulation of cellular component organization; GO:0051129,negative regulation of cellular component organization; GO:0051258,protein polymerization; GO:0051261,protein depolymerization; GO:0051493,regulation of cytoskeleton organization; GO:0051494,negative regulation of cytoskeleton organization; GO:0051693,actin filament capping; GO:0065003,protein-containing complex assembly; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0090066,regulation of anatomical structure size; GO:0110053,regulation of actin filament organization; GO:1901879,regulation of protein depolymerization; GO:1901880,negative regulation of protein depolymerization; GO:1902903,regulation of supramolecular fiber organization; GO:1902904,negative regulation of supramolecular fiber organization; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF02181.26:Formin Homology 2 Domain","--","--","--"]
["novel.3652",0.1388,0.2089,0.3543,5.6935,10.0088,5.1238,17.9214,20.7298,8.6057,4.0195,0.5677,1.8519,5.4847,1.9517,4.1614,2,3,5,60,126,62,196,212,112,47,7,27,62,22,47,3.418948442,"7.40126E-05",0.000271224,"up",4.351168259,"4.82645E-11","3.23263E-10","up",5.127417389,"9.74552E-17","1.22533E-15","up",6.375754057,"1.88998E-26","3.86439E-25","up",2.97699815,"5.21788E-07","5.15186E-06","up",2.038019573,"3.81265E-06","5.84205E-05","up",1.239510645,0.003875415,0.123262332,false,1.736525841,0.005703915,0.025558743,"up",0.806283288,0.081176036,0.286272725,false,"chr_002",34052032,34052647,".","--","--","--","--","hypothetical protein D8674_027241 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5IBQ8_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2636707.1};","--","--","--","--","--","--"]
["novel.3762",5.1874,3.2351,3.2918,2.6831,1.123,2.0864,1.939,0.8887,1.6294,4.059,1.8837,4.0866,2.5013,2.7771,3.1294,74,46,46,28,14,25,21,9,21,47,23,59,28,31,35,-0.028884948,0.945166089,0.960937284,false,-0.190925028,0.589724034,0.662483505,false,-0.795513265,0.072156219,0.110138626,false,-1.11063797,0.012080749,0.022572684,"down",-1.067480446,0.034943721,0.086354496,false,-0.903528311,0.039172437,0.120489911,false,-0.317811706,0.548755215,0.873873991,false,-0.746216604,0.137977803,0.288618413,false,-0.582467812,0.17667262,0.447171852,false,"chr_002",40368153,40369392,"+","--","--","K17680 twinkle protein [EC:5.6.2.3] | (RefSeq) twinkle homolog protein, chloroplastic/mitochondrial isoform X2 (A)","--","twinkle homolog protein, chloroplastic/mitochondrial-like [Malus domestica]","TWIH_ARATH RecName: Full=Twinkle homolog protein, chloroplastic/mitochondrial; AltName: Full=DNA helicase; EC=3.6.4.12; AltName: Full=DNA primase; EC=2.7.7.-; Flags: Precursor;","A0A540LJM2_MALBA RecName: Full=Toprim domain-containing protein {ECO:0000259|PROSITE:PS50880};","--","GO:0009507,chloroplast; GO:0005739,mitochondrion; GO:0043139,5'-3' DNA helicase activity; GO:0005524,ATP binding; GO:0016887,ATP hydrolysis activity; GO:0003678,DNA helicase activity; GO:0003896,DNA primase activity; GO:0046872,metal ion binding; GO:0003697,single-stranded DNA binding; GO:0009260,ribonucleotide biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004386,helicase activity; GO:0008094,ATP-dependent activity, acting on DNA; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0140657,ATP-dependent activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0016462,pyrophosphatase activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016818,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; GO:0017111,ribonucleoside triphosphate phosphatase activity; GO:0003899,DNA-directed 5'-3' RNA polymerase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034062,5'-3' RNA polymerase activity; GO:0097747,RNA polymerase activity; GO:0140098,catalytic activity, acting on RNA; GO:0043169,cation binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009117,nucleotide metabolic process; GO:0009165,nucleotide biosynthetic process; GO:0009259,ribonucleotide metabolic process; GO:0009987,cellular process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0019637,organophosphate metabolic process; GO:0019693,ribose phosphate metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0046390,ribose phosphate biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0090407,organophosphate biosynthetic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901293,nucleoside phosphate biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.3768",1.3847,0.9806,0.3326,0.3897,0.7922,0.6788,0.1609,0.3442,0.7212,0.8529,1.1895,1.8912,1.6089,0.7807,0.4675,34,24,8,7,17,14,3,6,16,17,25,47,31,15,9,0.720141914,0.219329418,0.306536305,false,0.373702113,0.572207883,0.646568639,false,-0.322389614,0.627739724,0.694261675,false,-0.867797012,0.25286913,0.327593477,false,-1.560645803,0.015395679,0.043961565,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.021375326,0.060427335,0.158814068,false,"NA","NA","NA","NA","chr_002",40631350,40632520,"+","--","--","--","--","hypothetical protein C1H46_002660 [Malus baccata]","--","A0A540NLC2_MALBA RecName: Full=Rep_fac-A_C domain-containing protein {ECO:0000259|Pfam:PF08646};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0006310,DNA recombination; GO:0006281,DNA repair; GO:0006260,DNA replication; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0033554,cellular response to stress; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF08646.13:Replication factor-A C terminal domain","--","--","--"]
["novel.3817",26.2046,24.8536,19.1894,7.8279,7.0513,9.0403,5.2471,5.3483,7.3029,4.3709,5.0903,4.1206,4.7593,4.9317,3.8108,421,398,302,92,99,122,64,61,106,57,70,67,60,62,48,-2.191197609,"9.4858E-22","2.6395E-20","down",-2.089520587,"1.12221E-18","1.54242E-17","down",-1.346692116,"1.53147E-09","8.99555E-09","down",-1.693368666,"1.24473E-12","9.38201E-12","down",0.510827425,0.059000647,0.130649545,false,0.412166509,0.143073798,0.303036969,false,-0.34631069,0.165382337,0.620065714,false,0.860889948,0.000483391,0.003415136,false,0.767931949,0.002487942,0.026421756,false,"chr_002",44465133,44465819,".","--","--","K11253 histone H3 | (RefSeq) histone H3.2 (A)","--","histone H3.2-like [Malus sylvestris]","H31_ARATH RecName: Full=Histone H3.1;","A0A1J3DV07_NOCCA SubName: Full=Histone H3.2 {ECO:0000313|EMBL:JAU22951.1}; Flags: Fragment;","Histones H3 and H4","GO:0010369,chromocenter; GO:0005829,cytosol; GO:0005576,extracellular region; GO:0000786,nucleosome; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0009536,plastid; GO:0003677,DNA binding; GO:0046982,protein heterodimerization activity; GO:0030527,structural constituent of chromatin; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0046983,protein dimerization activity; GO:0005198,structural molecule activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005737,cytoplasm; GO:0000785,chromatin; GO:0005694,chromosome; GO:0032991,protein-containing complex; GO:0032993,protein-DNA complex; GO:0044815,DNA packaging complex; GO:0043227,membrane-bounded organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0016020,membrane; GO:0071944,cell periphery","PF00125.27:Core histone H2A/H2B/H3/H4","--","--","--"]
["novel.3892",1.0057,0.8595,1.1788,2.2913,1.1935,1.552,2.0606,1.2068,1.9378,1.7897,1.8712,1.693,2.0411,1.3804,0.8077,27,23,31,45,28,35,42,23,47,39,43,46,43,29,17,1.001501922,0.003208836,0.00800881,"up",0.775231335,0.08362277,0.125385337,false,0.934424689,0.021746799,0.038188312,false,1.060744106,0.005849823,0.011700434,"up",0.07216304,0.835779819,0.89860566,false,0.300051101,0.503948571,0.685777167,false,0.124904998,0.756579619,0.939963939,false,-0.052565669,0.887837574,0.940798032,false,0.18573988,0.691030377,0.870912563,false,"chr_002",46746364,46752000,"-","--","--","K03250 translation initiation factor 3 subunit E | (RefSeq) eukaryotic translation initiation factor 3 subunit E-like (A)","--","hypothetical protein DVH24_011672 [Malus domestica]","EIF3E_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit E {ECO:0000255|HAMAP-Rule:MF_03004, ECO:0000303|PubMed:11029466}; Short=AtEIF3E-1 {ECO:0000303|PubMed:11029466}; Short=eIF3e {ECO:0000255|HAMAP-Rule:MF_03004, ECO:0000303|PubMed:11029466}; Short=p48 {ECO:0000303|PubMed:11029466}; AltName: Full=Eukaryotic translation initiation factor 3 subunit 6 {ECO:0000255|HAMAP-Rule:MF_03004}; Short=AtINT6 {ECO:0000303|PubMed:11029466}; Short=INT-6 {ECO:0000303|PubMed:11029466};","A0A498JWL4_MALDO RecName: Full=eIF3_N domain-containing protein {ECO:0000259|Pfam:PF09440};","Translation initiation factor 3, subunit e (eIF-3e)","GO:0008180,COP9 signalosome; GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0031597,cytosolic proteasome complex; GO:0016282,eukaryotic 43S preinitiation complex; GO:0033290,eukaryotic 48S preinitiation complex; GO:0005852,eukaryotic translation initiation factor 3 complex; GO:0071540,eukaryotic translation initiation factor 3 complex, eIF3e; GO:0005634,nucleus; GO:0003729,mRNA binding; GO:0003743,translation initiation factor activity; GO:0030371,translation repressor activity; GO:0006352,DNA-templated transcription initiation; GO:0009908,flower development; GO:0001732,formation of cytoplasmic translation initiation complex; GO:0009640,photomorphogenesis; GO:0006412,translation; GO:0006413,translational initiation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0008135,translation factor activity, RNA binding; GO:0045182,translation regulator activity; GO:0090079,translation regulator activity, nucleic acid binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048367,shoot system development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0002181,cytoplasmic translation; GO:0002183,cytoplasmic translational initiation; GO:0006518,peptide metabolic process; GO:0016043,cellular component organization; GO:0019538,protein metabolic process; GO:0022607,cellular component assembly; GO:0022613,ribonucleoprotein complex biogenesis; GO:0022618,ribonucleoprotein complex assembly; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0044260,cellular macromolecule metabolic process; GO:0065003,protein-containing complex assembly; GO:0071826,ribonucleoprotein complex subunit organization; GO:0071840,cellular component organization or biogenesis; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009639,response to red or far red light; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:0000502,proteasome complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1905368,peptidase complex; GO:1905369,endopeptidase complex; GO:0070993,translation preinitiation complex; GO:1990904,ribonucleoprotein complex","PF09440.13:eIF3 subunit 6 N terminal domain","--","--","--"]
["novel.3968",1.767,1.8171,2.3788,0.7548,0.8593,0.7494,0.4219,0.56,1.0879,0.8844,1.1741,1.1021,0.7178,0.875,0.5353,160,164,211,50,68,57,29,36,89,65,91,101,51,62,38,-0.727953521,0.001197918,0.0033286,false,-1.190454633,"7.93807E-06","2.71123E-05","down",-1.113333023,"7.66264E-06","2.62706E-05","down",-1.244168128,0.000318667,0.000808214,"down",-0.5014881,0.187008416,0.31794117,false,-0.038354731,0.926094306,0.960634521,false,-0.133076941,0.739746097,0.935787806,false,-0.367473283,0.174026049,0.339011629,false,0.103609462,0.743229885,0.896273481,false,"chr_003",4302466,4306424,"-","--","--","K03514 non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] | (RefSeq) uncharacterized protein LOC103448826 (A)","ko03018: RNA degradation","uncharacterized protein LOC114820935 [Malus domestica]","SOL1_ARATH RecName: Full=Carboxypeptidase SOL1; EC=3.4.17.-; AltName: Full=Protein SUPPRESSOR OF LLP1 1 {ECO:0000303|PubMed:12932329}; Flags: Precursor;","A0A6P5SDK7_PRUAV SubName: Full=uncharacterized protein LOC110755526 {ECO:0000313|RefSeq:XP_021812447.1};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0010008,endosome membrane; GO:0005615,extracellular space; GO:0016021,integral component of membrane; GO:0004181,metallocarboxypeptidase activity; GO:0008270,zinc ion binding; GO:0006518,peptide metabolic process; GO:0016485,protein processing; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004180,carboxypeptidase activity; GO:0008233,peptidase activity; GO:0008235,metalloexopeptidase activity; GO:0008237,metallopeptidase activity; GO:0008238,exopeptidase activity; GO:0016787,hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043603,cellular amide metabolic process; GO:0044237,cellular metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006508,proteolysis; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0051604,protein maturation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005768,endosome; GO:0012505,endomembrane system; GO:0012506,vesicle membrane; GO:0016020,membrane; GO:0030659,cytoplasmic vesicle membrane; GO:0031090,organelle membrane; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0098588,bounding membrane of organelle; GO:0110165,cellular anatomical entity; GO:0005576,extracellular region; GO:0031224,intrinsic component of membrane","PF14223.9:gag-polypeptide of LTR copia-type","--","--","--"]
["novel.4025",0.8983,1.3203,1.5141,0.5997,0.6932,0.9699,0.3027,0.3825,0.6012,2.4449,2.6358,2.4356,1.2512,2.6696,1.6786,43,63,71,21,29,39,11,13,26,95,108,118,47,100,63,1.198874554,"6.42055E-06","2.88742E-05","up",0.877239312,0.013441417,0.024799746,false,-0.505632563,0.171474039,0.234053969,false,-1.244591176,0.003185226,0.006732537,"down",-2.423467629,"1.6468E-12","4.01924E-11","down",-2.105911798,"1.3854E-06","2.43109E-05","down",-0.739206894,0.110697476,0.548337272,false,-1.685367908,"1.40254E-08","3.67967E-07","down",-1.358117302,0.000533118,0.008226879,"down","chr_003",10506835,10509489,"-","--","--","K01411 nardilysin [EC:3.4.24.61] | (RefSeq) nardilysin-like (A)","--","nardilysin-like [Malus sylvestris]","NRDC_ARATH RecName: Full=Nardilysin-like {ECO:0000305}; EC=3.4.24.61 {ECO:0000305}; AltName: Full=N-arginine dibasic convertase-like {ECO:0000305}; Short=NRD convertase-like {ECO:0000305}; Short=NRD-C {ECO:0000305};","A0A498HUH7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH74430.1};","N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily","GO:0005829,cytosol; GO:0046872,metal ion binding; GO:0004222,metalloendopeptidase activity; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008237,metallopeptidase activity; GO:0016787,hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity","PF16187.8:Middle or third domain of peptidase_M16","--","--","--"]
["novel.4133",3.1167,3.2519,3.3089,1.1929,0.2853,1.3358,0.4926,0.5268,0.276,1.3823,1.7478,0.3695,0.7944,1.4339,1.2721,25,26,26,7,2,9,3,3,2,9,12,3,5,9,8,-1.305766769,0.029917125,0.056770112,false,-1.177006345,0.02676633,0.045813124,"down",-1.594910996,0.01023145,0.019450633,"down",-2.643956332,0.000187703,0.000494917,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_003",25947656,25947998,".","--","--","K06268 serine/threonine-protein phosphatase 2B regulatory subunit | (RefSeq) calcineurin subunit B-like (A)","--","--","--","--","--","--","--","--","--","--"]
["novel.4218",2.8417,2.7967,3.2325,2.7377,1.7033,2.2876,3.244,4.1935,4.9428,1.367,0.9802,0.8557,0.9657,0.8301,1.2082,105,103,117,74,55,71,91,110,165,41,31,32,28,24,35,-1.286055417,"1.44047E-05","6.0302E-05","down",-1.26881855,"9.49709E-06","3.20187E-05","down",-0.19108958,0.472846103,0.551866855,false,0.763283297,0.001120476,0.002578447,false,2.060884105,"7.08505E-11","1.3719E-09","up",2.048222085,"1.60992E-11","8.42178E-10","up",0.954031576,0.000811887,0.051945677,false,1.109578151,0.001972691,0.010901066,"up",1.103100893,0.001198213,0.015490703,"up","chr_003",33943809,33945388,".","--","--","K13065 shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133] | (RefSeq) vinorine synthase-like (A)","ko00940: Phenylpropanoid biosynthesis; ko00941: Flavonoid biosynthesis; ko00945: Stilbenoid, diarylheptanoid and gingerol biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","BAHD acyltransferase At5g47980-like [Malus domestica]","BAHD1_ARATH RecName: Full=BAHD acyltransferase At5g47980; EC=2.3.1.-;","A0A540LTV0_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD89925.1};","--","GO:0016746,acyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity","PF02458.18:Transferase family","--","--","--"]
["novel.4316",8.0636,8.5801,6.9567,0.2227,0.1243,0.4202,0.143,0,0.0301,0.5017,1.0785,0.8584,0.4844,0.3817,0.277,297,315,251,6,4,13,4,0,1,15,34,32,14,11,8,-3.090196417,"2.28077E-28","1.01048E-26","down",-4.076145469,"7.05249E-35","2.72656E-33","down",-4.738982263,"1.70508E-33","7.19372E-32","down",-6.825184097,"3.59101E-23","5.98501E-22","down",-3.70484138,"3.59896E-05",0.00023224,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.633545536,0.008501488,0.035411846,"down","NA","NA","NA","NA","chr_003",41007703,41011189,"+","--","--","--","--","GDSL esterase/lipase At5g45670-like [Malus domestica]","GDL82_ARATH RecName: Full=GDSL esterase/lipase At5g45670; EC=3.1.1.-; AltName: Full=Extracellular lipase At5g45670; Flags: Precursor;","A0A540MPK9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE00731.1};","--","GO:0005576,extracellular region; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016042,lipid catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0006629,lipid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00657.25:GDSL-like Lipase/Acylhydrolase","--","--","--"]
["novel.438",1.3812,1.3294,1.7424,1.6425,1.6705,1.8448,1.7601,1.8823,2.7096,1.2866,1.2988,1.2871,1.1734,0.7893,0.8307,123,118,152,107,130,138,119,119,218,93,99,116,82,55,58,-0.012630232,0.952991668,0.96673155,false,-0.374329172,0.158460037,0.218824354,false,0.428520843,0.044451399,0.071919032,false,0.794816112,0.000886762,0.002078634,false,0.821226549,0.000610566,0.002824712,false,1.185464413,"2.90567E-05",0.000339134,"up",0.365823956,0.125181949,0.571152071,false,0.458691433,0.028151046,0.089547706,false,0.829067957,0.001494756,0.018217739,false,"chr_001",43836952,43841093,"-","--","--","no KO assigned | (RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g50270-like (A)","--","hypothetical protein DVH24_042654 [Malus domestica]","PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485;","A0A498I1T6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH75867.1};","FOG: PPR repeat","GO:0003729,mRNA binding; GO:0008270,zinc ion binding; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding","PF01535.23:PPR repeat","--","--","--"]
["novel.4446",12.2376,18.7219,14.8859,3.2047,1.9852,2.6793,1.8528,1.0567,1.4531,3.0615,4.1084,5.1888,2.2706,3.5352,2.2726,261,398,311,50,37,48,30,16,28,53,75,112,38,59,38,-1.703294568,"1.03664E-10","9.64838E-10","down",-2.213468892,"5.10523E-16","5.57255E-15","down",-2.337202391,"1.09902E-16","1.37776E-15","down",-3.10862226,"2.37254E-24","4.26999E-23","down",-1.39006111,0.000154408,0.000846741,"down",-0.880219651,0.025473663,0.087287356,false,-0.774745977,0.046564878,0.390573831,false,-0.61358119,0.065392637,0.168908169,false,-0.097724391,0.781371621,0.915345875,false,"chr_004",1466765,1468229,"-","--","--","--","--","probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Pyrus x bretschneideri]","CRR3_ARATH RecName: Full=Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic {ECO:0000305}; Short=Probable NDH subunit CRR3 {ECO:0000305}; AltName: Full=Protein CHLORORESPIRATORY REDUCTION 3 {ECO:0000303|PubMed:17041026}; Flags: Precursor;","A0A498I7G0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH79180.1};","--","GO:0009507,chloroplast; GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0010598,NAD(P)H dehydrogenase complex (plastoquinone); GO:0009773,photosynthetic electron transport in photosystem I; GO:0006091,generation of precursor metabolites and energy; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009767,photosynthetic electron transport chain; GO:0009987,cellular process; GO:0015979,photosynthesis; GO:0019684,photosynthesis, light reaction; GO:0022900,electron transport chain; GO:0044237,cellular metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009579,thylakoid; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0055035,plastid thylakoid membrane; GO:0031224,intrinsic component of membrane; GO:0032991,protein-containing complex; GO:1902494,catalytic complex","--","--","--","--"]
["novel.4506",3.0145,2.5389,4.787,0.3052,0.1278,0.8418,0.3431,0.5767,0.4119,1.8798,1.1739,1.7283,0.332,1.5695,0.5222,81,68,126,6,3,19,7,11,10,41,27,47,7,33,11,-0.913567591,0.011898083,0.025557915,false,-1.801173502,0.000572984,0.001415187,"down",-2.821058401,"8.53538E-07","3.39568E-06","down",-2.676484207,"3.00917E-09","1.57223E-08","down",-1.748587267,0.000420749,0.002047593,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.89512424,0.003098866,0.015686077,"down","NA","NA","NA","NA","chr_004",5806502,5807650,".","--","--","--","--","zinc finger protein 5-like [Malus sylvestris]","ZFP5_ARATH RecName: Full=Zinc finger protein 5 {ECO:0000305};","A0A498IC65_MALDO RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};","--","GO:0005634,nucleus; GO:0003700,DNA-binding transcription factor activity; GO:0046872,metal ion binding; GO:0000976,transcription cis-regulatory region binding; GO:0009736,cytokinin-activated signaling pathway; GO:0009873,ethylene-activated signaling pathway; GO:0009740,gibberellic acid mediated signaling pathway; GO:0048510,regulation of timing of transition from vegetative to reproductive phase; GO:0006355,regulation of DNA-templated transcription; GO:0048767,root hair elongation; GO:0048766,root hair initiation; GO:0010026,trichome differentiation; GO:0010090,trichome morphogenesis; GO:0003674,molecular_function; GO:0140110,transcription regulator activity; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009735,response to cytokinin; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071368,cellular response to cytokinin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0000160,phosphorelay signal transduction system; GO:0009723,response to ethylene; GO:0035556,intracellular signal transduction; GO:0071369,cellular response to ethylene stimulus; GO:0009739,response to gibberellin; GO:0010476,gibberellin mediated signaling pathway; GO:0033993,response to lipid; GO:0071370,cellular response to gibberellin stimulus; GO:0071396,cellular response to lipid; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0009888,tissue development; GO:0032502,developmental process; GO:0040034,regulation of development, heterochronic; GO:0048506,regulation of timing of meristematic phase transition; GO:0048507,meristem development; GO:0048509,regulation of meristem development; GO:0048856,anatomical structure development; GO:0050793,regulation of developmental process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0071704,organic substance metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0010015,root morphogenesis; GO:0010053,root epidermal cell differentiation; GO:0010054,trichoblast differentiation; GO:0016049,cell growth; GO:0021700,developmental maturation; GO:0022622,root system development; GO:0030154,cell differentiation; GO:0032501,multicellular organismal process; GO:0040007,growth; GO:0048364,root development; GO:0048468,cell development; GO:0048469,cell maturation; GO:0048588,developmental cell growth; GO:0048589,developmental growth; GO:0048731,system development; GO:0048764,trichoblast maturation; GO:0048765,root hair cell differentiation; GO:0048869,cellular developmental process; GO:0060560,developmental growth involved in morphogenesis; GO:0071695,anatomical structure maturation; GO:0080147,root hair cell development; GO:0090558,plant epidermis development; GO:0090627,plant epidermal cell differentiation; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0000902,cell morphogenesis; GO:0000904,cell morphogenesis involved in differentiation; GO:0090626,plant epidermis morphogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13912.9:C2H2-type zinc finger","--","--","--"]
["novel.4589",2.0811,3.3306,3.7431,0.3387,0.3969,1.0028,0.4569,0.5584,0.9872,1.5261,2.4892,1.6156,1.0735,0.5699,0.6952,42,67,74,5,7,17,7,8,18,25,43,33,17,9,11,-0.518830046,0.158771114,0.23518021,false,-1.668439822,0.000164807,0.000449069,"down",-2.182534743,"2.54302E-05","7.98002E-05","down",-1.89485518,"5.31727E-05",0.000154406,"down",-1.365611185,0.00705486,0.0230876,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.651722768,0.003295266,0.01648911,"down","NA","NA","NA","NA","chr_004",14406244,14407106,".","--","--","--","--","protein DMP2-like [Malus domestica]","DMP2_ARATH RecName: Full=Protein DMP2 {ECO:0000303|PubMed:20712629}; Short=AtDMP2 {ECO:0000303|PubMed:20712629};","A0A540MLU4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD99748.1};","--","GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0009705,plant-type vacuole membrane; GO:0009838,abscission; GO:0010256,endomembrane system organization; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment; GO:0031224,intrinsic component of membrane; GO:0000325,plant-type vacuole; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0098588,bounding membrane of organelle","PF05078.15:Protein of unknown function (DUF679)","--","--","--"]
["novel.4658",1.3112,0.9118,0.4411,0.0611,0.0511,0.0355,0,0.063,0,0.312,0.2785,0.3239,0.1139,0.1714,0.3041,88,61,29,3,3,2,0,3,0,17,16,22,6,9,16,-1.362173425,0.005222268,0.012372407,"down",-1.898600924,0.000682869,0.001664045,"down",-3.974184616,"5.6012E-08","2.63941E-07","down",-5.249459632,"2.09624E-07","8.66276E-07","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_004",22680709,22685232,"-","--","--","--","--","TORTIFOLIA1-like protein 2 isoform X2 [Malus sylvestris]","TORL2_ARATH RecName: Full=TORTIFOLIA1-like protein 2 {ECO:0000303|PubMed:15324671};","A0A498I417_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH78498.1};","--","GO:0005874,microtubule; GO:0008017,microtubule binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0008092,cytoskeletal protein binding; GO:0015631,tubulin binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005856,cytoskeleton; GO:0015630,microtubule cytoskeleton; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0099080,supramolecular complex; GO:0099081,supramolecular polymer; GO:0099512,supramolecular fiber; GO:0099513,polymeric cytoskeletal fiber; GO:0110165,cellular anatomical entity","PF02985.25:HEAT repeat","--","--","--"]
["novel.4714",0.2041,0.1024,0.1042,3.4877,1.8685,3.0374,2.2852,1.5813,3.5018,2.3889,0.7154,1.1092,1.5607,2.3476,0.9112,2,1,1,25,16,25,17,11,31,19,6,11,12,18,7,"NA","NA","NA","NA","NA","NA","NA","NA",4.554243567,"3.91395E-07","1.63451E-06","up","NA","NA","NA","NA",0.907373131,0.154114325,0.275072041,false,"NA","NA","NA","NA",-0.104057232,0.833486078,0.961039141,false,1.022692629,0.096026771,0.224133527,false,0.735612126,0.17698277,0.447632851,false,"chr_004",33464729,33465147,".","--","--","--","--","protein FAM9A-like [Malus domestica]","--","--","--","--","--","--","--","--"]
["novel.4804",3.8226,3.185,2.3811,3.8083,2.2242,2.6225,2.6455,3.0117,0.9323,4.3901,5.1472,5.6975,5.0365,4.8851,9.4208,59,49,36,43,30,34,31,33,13,55,68,89,61,59,114,0.881514838,0.00369017,0.00908392,false,1.327313129,0.000229247,0.000609146,"up",0.086012499,0.822449399,0.859198856,false,-0.228075152,0.647077734,0.714390248,false,-1.099480476,0.015889549,0.045090762,"down",-1.544161718,0.001268434,0.008048927,"down",-0.318703619,0.539548914,0.870274435,false,-0.779628494,0.019139197,0.06676962,false,-1.217759976,0.001738136,0.02029119,"down","chr_005",1516223,1567558,"+","--","--","--","--","hypothetical protein DVH24_042023 [Malus domestica]","PSYR1_ARATH RecName: Full=Tyrosine-sulfated glycopeptide receptor 1 {ECO:0000305}; EC=2.7.11.1 {ECO:0000305}; AltName: Full=PSY1 receptor {ECO:0000303|PubMed:23062058};","A0A498ISW1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH85255.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0042802,identical protein binding; GO:0001653,peptide receptor activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004888,transmembrane signaling receptor activity; GO:0045851,pH reduction; GO:0006468,protein phosphorylation; GO:0031347,regulation of defense response; GO:0009826,unidimensional cell growth; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006885,regulation of pH; GO:0008150,biological_process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055067,monovalent inorganic cation homeostasis; GO:0055080,cation homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0098771,inorganic ion homeostasis; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006950,response to stress; GO:0006952,defense response; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0080134,regulation of response to stress; GO:0000902,cell morphogenesis; GO:0009653,anatomical structure morphogenesis; GO:0016049,cell growth; GO:0032502,developmental process; GO:0040007,growth; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0060560,developmental growth involved in morphogenesis; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF12799.10:Leucine Rich repeats (2 copies)","--","--","--"]
["novel.4890",0,0,0,1.8004,0.4019,0.8363,4.2793,2.4737,4.5679,0.3245,0.9232,1.0411,0.2238,0.2244,0.448,0,0,0,15,4,8,37,20,47,3,9,12,2,2,4,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",8.137969182,"1.60319E-10","9.73766E-10","up",2.402940422,"1.30986E-05","9.44123E-05","up",3.666045567,"8.68096E-08","2.05675E-06","up",1.992777221,0.000693076,0.047900428,"up","NA","NA","NA","NA","NA","NA","NA","NA","chr_005",5683155,5683641,".","--","--","--","--","hypothetical protein C1H46_022558 [Malus baccata]","--","A0A540LZI5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD91848.1};","--","--","--","--","--","--"]
["novel.4981",0.6938,0.5495,0.584,1.6972,1.2675,1.3187,1.459,2.0232,1.3608,1.0197,0.9812,0.902,1.3806,1.0111,0.9315,57,45,47,102,91,91,91,118,101,68,69,75,89,65,60,0.852548548,0.001825142,0.004843715,false,1.157464475,0.000104313,0.000294475,"up",1.440427047,"2.61645E-07","1.12264E-06","up",1.689661542,"1.03106E-08","5.0659E-08","up",0.84869775,0.002338695,0.009021318,false,0.547028631,0.066731504,0.176832416,false,0.247430918,0.384200935,0.798079941,false,0.604599903,0.021619254,0.07306891,false,0.308584941,0.279220696,0.570460621,false,"chr_005",8775344,8837873,"+","--","--","K13420 LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase FLS2 (A)","ko04016: MAPK signaling pathway - plant; ko04626: Plant-pathogen interaction","probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Malus domestica]","Y3475_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At3g47570; EC=2.7.11.1; Flags: Precursor;","A0A5N5FZQ8_9ROSA SubName: Full=LRR receptor-like serine/threonine-protein kinase {ECO:0000313|EMBL:KAB2606920.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["novel.5051",0.9979,1.0207,1.1685,0.5082,0.7836,0.99,0.3995,0.5374,0.8988,0.7593,1.7487,1.7883,0.5361,0.7626,0.4866,102,104,117,38,70,85,31,39,83,63,153,185,43,61,39,0.608766441,0.060567216,0.10407756,false,-0.542976448,0.04676889,0.075015623,false,-0.265658194,0.371526211,0.451684886,false,-0.51335871,0.114678838,0.166205263,false,-1.111108455,0.00765848,0.024715833,"down",0.044912274,0.907594092,0.949517915,false,-0.248440727,0.538327542,0.870057455,false,-0.859260201,0.02972292,0.09350006,false,0.302089479,0.396858758,0.678434135,false,"chr_005",15673491,15677971,"-","--","--","K02111 F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC114822316 (A)","ko00190: Oxidative phosphorylation; ko00195: Photosynthesis; ko01100: Metabolic pathways","hypothetical protein C1H46_012276 [Malus baccata]","--","A0A540MUQ4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE02090.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.5155",0.8253,0.9832,0.5792,0.6346,1.0034,1.7194,0.8153,0.7992,0.5709,1.3345,1.5066,1.58,2.3664,2.6367,2.3027,16,19,11,9,17,28,12,11,10,21,25,31,36,40,35,1.072329303,0.016632361,0.034220072,"up",1.902102092,"2.40452E-06","8.8667E-06","up","NA","NA","NA","NA","NA","NA","NA","NA",-0.915561396,0.057093778,0.127480417,false,-1.745483702,"6.28981E-05",0.000654845,"down","NA","NA","NA","NA",-0.35429928,0.474920707,0.659382707,false,-1.17371255,0.007960477,0.061342389,false,"chr_005",32844662,32845490,".","--","--","--","--","hypothetical protein C1H46_022280 [Malus baccata]","--","A0A540M069_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD92123.1};","--","--","--","--","--","--"]
["novel.5216",4.5882,5.8182,5.516,2.9291,2.5585,3.5491,2.4235,3.2479,4.2021,1.8938,1.6326,1.4728,1.5137,2.3216,1.515,197,249,232,92,96,128,79,99,163,66,60,64,51,78,51,-1.486261298,"8.64719E-11","8.12765E-10","down",-1.281472558,"2.28978E-07","9.76231E-07","down",-0.606943945,0.004808427,0.009836125,false,-0.408662153,0.094726165,0.140940405,false,1.088660033,0.000208594,0.001102591,"up",0.888596705,0.004066427,0.020765865,false,0.198980706,0.467199141,0.839657703,false,0.89464982,0.000699992,0.004655735,false,0.699260741,0.013177484,0.087339433,false,"chr_005",38570483,38575412,"-","--","--","K03504 DNA polymerase delta subunit 3 | (RefSeq) uncharacterized protein LOC103448783 (A)","ko03030: DNA replication; ko03410: Base excision repair; ko03420: Nucleotide excision repair; ko03430: Mismatch repair; ko03440: Homologous recombination","eukaryotic translation initiation factor 5B [Pyrus x bretschneideri]","--","A0A540MXS0_MALBA RecName: Full=DNA polymerase delta subunit 3 {ECO:0000256|ARBA:ARBA00017589};","--","GO:0043625,delta DNA polymerase complex; GO:0006260,DNA replication; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0000228,nuclear chromosome; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005657,replication fork; GO:0005694,chromosome; GO:0030894,replisome; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0032993,protein-DNA complex; GO:0042575,DNA polymerase complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0043596,nuclear replication fork; GO:0043601,nuclear replisome; GO:0061695,transferase complex, transferring phosphorus-containing groups; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex","PF09507.13:DNA polymerase subunit Cdc27","--","--","--"]
["novel.5303",0,0.0245,0,1.2039,1.1477,1.0484,2.1911,1.4128,1.7871,0.1808,0.1429,0.0725,0.3429,0.2188,0.4056,0,1,0,36,41,36,68,41,66,6,5,3,11,7,13,"NA","NA","NA","NA","NA","NA","NA","NA",7.219735446,"7.75569E-09","4.1489E-08","up",7.952351831,"1.19201E-10","7.34513E-10","up",3.907409872,"2.16942E-13","5.90975E-12","up",2.484745725,"8.3297E-09","2.4213E-07","up",0.730399399,0.024598019,0.304813951,false,3.177084306,"1.78582E-08","4.54248E-07","up",1.762270358,0.000102418,0.002227372,"up","chr_006",1368569,1370316,".","--","--","--","--","uncharacterized protein LOC126614693 [Malus sylvestris]","--","A0A5N5G6Y9_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2610947.1};","FOG: Reverse transcriptase","--","PF14392.9:Zinc knuckle","--","--","--"]
["novel.5373",5.212,6.7022,4.6872,0.3534,1.1124,0.6402,0.9535,0.7283,0.7784,1.3377,1.5827,1.6349,1.0279,1.0044,1.0948,504,646,444,25,94,52,70,50,68,105,131,160,78,76,83,-1.681829732,"8.61353E-16","1.39016E-14","down",-2.118351166,"1.36607E-22","2.44544E-21","down",-2.748302885,"1.07718E-12","9.15405E-12","down",-2.474254403,"3.00618E-24","5.37787E-23","down",-0.779245976,0.001324202,0.005534102,false,-0.340231227,0.188930642,0.366433814,false,0.26861108,0.548617784,0.873873991,false,-1.044862337,0.011813552,0.045896968,"down",-0.600707988,0.153930075,0.413644751,false,"chr_006",5148498,5153376,"-","--","--","K02608 origin recognition complex subunit 6 | (RefSeq) origin of replication complex subunit 6 isoform X1 (A)","--","origin of replication complex subunit 6-like [Malus sylvestris]","ORC6_ARATH RecName: Full=Origin of replication complex subunit 6 {ECO:0000303|PubMed:16179646}; Short=AtORC6 {ECO:0000303|PubMed:16179646};","A0A540KVL1_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD78258.1};","Origin recognition complex, subunit 6","GO:0005664,nuclear origin of replication recognition complex; GO:0000808,origin recognition complex; GO:0003677,DNA binding; GO:0006260,DNA replication; GO:0006270,DNA replication initiation; GO:0009555,pollen development; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006261,DNA-templated DNA replication; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0000228,nuclear chromosome; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0005694,chromosome; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0032991,protein-containing complex; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0140513,nuclear protein-containing complex","--","--","--","--"]
["novel.5434",0.6974,0.4419,0.4871,0.4014,0.378,0.5244,0.4835,0.3619,0.1625,1.0401,1.0292,1.3056,1.0758,1.4072,1.2641,19,12,13,8,9,12,10,7,4,23,24,36,23,30,27,1.241273219,0.005575779,0.013115485,"up",1.492663815,0.000715693,0.001736725,"up","NA","NA","NA","NA","NA","NA","NA","NA",-1.65228954,0.004015061,0.014310142,"down",-1.905482194,0.00063453,0.004552594,"down","NA","NA","NA","NA",-1.331848269,0.007100556,0.030632747,"down",-1.576460878,0.001002044,0.013469772,"down","chr_006",9562535,9563773,"+","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["novel.5446",1.4592,1.4003,2.1373,3.2089,1.5972,1.4351,1.0028,1.4299,1.3343,2.9702,2.2978,2.8836,2.1021,3.5674,1.5375,23,22,33,37,22,19,12,16,19,38,31,46,26,44,19,0.900414054,0.016561709,0.034081981,false,0.823928803,0.065487224,0.10109389,false,0.534525708,0.270304561,0.345875576,false,"NA","NA","NA","NA",-1.009328149,0.015154246,0.043385558,"down",-0.931016939,0.056986216,0.157887421,false,-0.656278372,0.202149238,0.660140291,false,-0.350186965,0.439084797,0.626409696,false,-0.264440331,0.603962682,0.823729876,false,"chr_006",10387961,10389665,"-","--","--","K17778 mitochondrial import inner membrane translocase subunit TIM10 | (RefSeq) mitochondrial import inner membrane translocase subunit TIM10 (A)","--","hypothetical protein C1H46_020416 [Malus baccata]","TIM10_ARATH RecName: Full=Mitochondrial import inner membrane translocase subunit TIM10;","A0A540M5I7_MALBA RecName: Full=zf-Tim10_DDP domain-containing protein {ECO:0000259|Pfam:PF02953};","Mitochondrial import inner membrane translocase, subunits TIM10/TIM12","GO:0005743,mitochondrial inner membrane; GO:0005758,mitochondrial intermembrane space; GO:0046872,metal ion binding; GO:0045039,protein insertion into mitochondrial inner membrane; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0006605,protein targeting; GO:0006626,protein targeting to mitochondrion; GO:0006810,transport; GO:0006839,mitochondrial transport; GO:0006886,intracellular protein transport; GO:0006996,organelle organization; GO:0007005,mitochondrion organization; GO:0007006,mitochondrial membrane organization; GO:0007007,inner mitochondrial membrane organization; GO:0008104,protein localization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015031,protein transport; GO:0016043,cellular component organization; GO:0033036,macromolecule localization; GO:0033365,protein localization to organelle; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051204,protein insertion into mitochondrial membrane; GO:0051205,protein insertion into membrane; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0051668,localization within membrane; GO:0061024,membrane organization; GO:0070585,protein localization to mitochondrion; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0071840,cellular component organization or biogenesis; GO:0072594,establishment of protein localization to organelle; GO:0072655,establishment of protein localization to mitochondrion; GO:0072657,protein localization to membrane; GO:0090150,establishment of protein localization to membrane; GO:0090151,establishment of protein localization to mitochondrial membrane; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005740,mitochondrial envelope; GO:0016020,membrane; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031966,mitochondrial membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0031970,organelle envelope lumen; GO:0031974,membrane-enclosed lumen; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen","PF02953.18:Tim10/DDP family zinc finger","--","--","--"]
["novel.551",1.8174,1.7875,0.9458,43.4993,29.767,21.89,41.3984,47.9863,43.8208,6.8486,2.1648,3.6618,18.8911,22.8604,20.953,51,50,26,893,730,516,882,956,1111,156,52,104,416,502,461,1.679892293,0.000492875,0.00150651,"up",4.070085276,"4.79576E-61","5.22702E-59","up",4.60251343,"2.09595E-38","1.17792E-36","up",5.150097662,"3.05996E-95","8.27581E-93","up",3.488002714,"9.26551E-21","5.67233E-19","up",1.094829602,"6.21588E-13","4.18521E-11","up",0.546750397,0.049135298,0.39829573,false,2.944088987,"9.98223E-12","4.96262E-10","up",0.557087946,0.042418442,0.191054946,false,"chr_001",53926487,53927686,".","--","--","--","--","protein DMP3-like [Malus domestica]","DMP3_ARATH RecName: Full=Protein DMP3 {ECO:0000303|PubMed:20712629}; Short=AtDMP3 {ECO:0000303|PubMed:20712629};","A0A498HVG6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH73505.1};","--","GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0010256,endomembrane system organization; GO:0090693,plant organ senescence; GO:0008150,biological_process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0099402,plant organ development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment; GO:0031224,intrinsic component of membrane","PF05078.15:Protein of unknown function (DUF679)","--","--","--"]
["novel.5697",0.0257,0.1161,0.0131,1.0366,0.7942,0.8263,0.6095,0.3802,0.313,0.3959,0.4955,0.3048,0.475,0.5256,0.5082,2,9,1,59,54,54,36,21,22,25,33,24,29,32,31,3.123751422,"1.52928E-05","6.36504E-05","up",3.568950947,"3.84961E-08","1.82807E-07","up",4.307282408,"2.17205E-12","1.7808E-11","up",3.351970927,"6.71814E-06","2.24769E-05","up",0.237929086,0.59940352,0.726731049,false,-0.207382329,0.615052053,0.769245931,false,-0.962646193,0.012525595,0.227690056,false,1.20185353,0.000788674,0.005149056,"up",0.761103927,0.017234226,0.105160549,false,"chr_007",2734832,2738158,"-","--","--","K14503 brassinosteroid resistant 1/2 | (RefSeq) BES1/BZR1 homolog protein 2-like (A)","ko04075: Plant hormone signal transduction","hypothetical protein C1H46_013171 [Malus baccata]","POLR1_ARATH RecName: Full=Retrovirus-related Pol polyprotein from transposon RE1; AltName: Full=Retro element 1 {ECO:0000303|PubMed:10689195}; Short=AtRE1 {ECO:0000303|PubMed:10689195}; Includes: RecName: Full=Protease RE1; EC=3.4.23.-; Includes: RecName: Full=Reverse transcriptase RE1; EC=2.7.7.49; Includes: RecName: Full=Endonuclease RE1;","A0A6N2KNA0_SALVM RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0004190,aspartic-type endopeptidase activity; GO:0004519,endonuclease activity; GO:0046872,metal ion binding; GO:0003676,nucleic acid binding; GO:0003964,RNA-directed DNA polymerase activity; GO:0015074,DNA integration; GO:0006310,DNA recombination; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0004518,nuclease activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034061,DNA polymerase activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0019538,protein metabolic process; GO:1901564,organonitrogen compound metabolic process","PF07727.17:Reverse transcriptase (RNA-dependent DNA polymerase)","--","--","--"]
["novel.5729",2.334,2.007,2.5528,0.3418,0.3815,0.1985,0.4392,0.4697,0.5536,0.1027,0.8765,0.2471,0.2125,1.3848,0.2126,28,24,30,3,4,2,4,4,6,1,9,3,2,13,2,-2.326607038,0.000813774,0.002353477,"down",-1.64184383,0.022385666,0.039101444,"down",-2.68409777,"7.86716E-05",0.000227241,"down",-1.949123981,0.001064116,0.00246055,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_007",4987099,4987611,".","--","--","--","--","uncharacterized protein LOC126586638 [Malus sylvestris]","R13L1_ARATH RecName: Full=Putative disease resistance RPP13-like protein 1;","A0A498KA35_MALDO RecName: Full=Rx_N domain-containing protein {ECO:0000259|Pfam:PF18052};","Apoptotic ATPase","GO:0043531,ADP binding; GO:0005524,ATP binding; GO:0006952,defense response; GO:0051707,response to other organism; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms","PF18052.4:Rx N-terminal domain","--","--","--"]
["novel.5803",0.8292,1.0101,0.9069,0.8096,1.6266,1.0576,1.6382,2.5028,1.5078,1.1675,3.3905,2.3993,2.4152,2.5734,1.1331,14,17,15,10,24,15,21,30,23,16,49,41,32,34,15,1.515325474,0.002025919,0.005309794,"up",1.451882732,0.002640789,0.00571687,"up","NA","NA","NA","NA",1.320899567,0.00468904,0.009580313,"up",-0.181915021,0.711452406,0.812671587,false,-0.115458922,0.808121005,0.894417973,false,0.73998747,0.144564258,0.599673119,false,-0.920665157,0.093005748,0.219243028,false,-0.845940471,0.109955561,0.34209768,false,"chr_007",8406729,8420816,"-","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["novel.5894",8.367,7.2359,9.2544,1.89,1.8757,2.5454,1.6522,1.3854,1.8932,2.7745,3.4304,2.7182,2.2706,3.1877,1.9999,587,506,636,97,115,150,88,69,120,158,206,193,125,175,110,-1.293674536,"8.23663E-14","1.0813E-12","down",-1.443616746,"1.57798E-11","1.11638E-10","down",-1.765084424,"2.14487E-19","3.43479E-18","down",-2.047452274,"8.51153E-26","1.68028E-24","down",-0.74259332,0.00079523,0.003555693,false,-0.590630814,0.02601225,0.088606226,false,-0.284516705,0.238735003,0.69434075,false,-0.456239075,0.038963606,0.114423292,false,-0.297267611,0.256108661,0.54551755,false,"chr_007",15110949,15114421,"-","--","--","K03070 preprotein translocase subunit SecA [EC:7.4.2.8] | (RefSeq) LOW QUALITY PROTEIN: protein translocase subunit SECA2, chloroplastic (A)","ko03060: Protein export","hypothetical protein C1H46_015737 [Malus baccata]","M750_ARATH RecName: Full=Uncharacterized mitochondrial protein AtMg00750; AltName: Full=ORF119;","A0A540MIS2_MALBA RecName: Full=RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00012493}; EC=2.7.7.49 {ECO:0000256|ARBA:ARBA00012493};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0005739,mitochondrion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00665.29:Integrase core domain","--","--","--"]
["novel.5978",23.3365,20.6265,16.1636,30.0207,41.4006,28.6402,34.2378,43.4218,35.6129,31.793,21.3526,24.1266,37.3612,36.1864,39.0628,1748,1540,1186,1645,2710,1802,1947,2309,2410,1933,1369,1829,2196,2121,2294,0.554633785,0.017745582,0.036217949,false,1.19383044,"7.2206E-12","5.28824E-11","up",0.954757243,"8.71312E-05",0.000249475,false,1.195799333,"5.76075E-09","2.90873E-08","up",0.655754445,0.003381275,0.012383768,false,0.016807761,0.914075757,0.953277498,false,0.237157191,0.314724044,0.755288695,false,0.420524085,0.105396822,0.239313676,false,-0.211936361,0.313767516,0.60557284,false,"chr_007",28202837,28207634,"+","--","--","K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) probable serine/threonine-protein kinase PBL7 isoform X2 (A)","ko04626: Plant-pathogen interaction","hypothetical protein DVH24_026390 [Malus domestica]","WAKLO_ARATH RecName: Full=Wall-associated receptor kinase-like 14; EC=2.7.11.-; Flags: Precursor;","A0A498KLE9_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","Serine/threonine protein kinase","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0007166,cell surface receptor signaling pathway; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["novel.6038",2.4616,2.2226,1.7231,0.3365,0.4024,0.2512,0.2316,0.3963,0.7785,0.6499,0.5341,0.3127,0.4033,0.3146,0.2243,70,63,48,7,10,6,5,8,20,15,13,9,9,7,5,-1.929963617,"7.47753E-06","3.32534E-05","down",-2.474937481,"1.85931E-07","8.03135E-07","down",-2.476707332,"1.57665E-07","6.99675E-07","down",-1.896248381,"9.17258E-05",0.000255342,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_007",32405168,32407287,"-","--","--","K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1 (A)","ko04626: Plant-pathogen interaction","TMV resistance protein N-like isoform X2 [Malus domestica]","RPV1_VITRO RecName: Full=Disease resistance protein RPV1 {ECO:0000305}; AltName: Full=NAD(+) hydrolase RPV1; EC=3.2.2.6 {ECO:0000305|PubMed:31439792}; AltName: Full=Resistance to Plasmopara viticola protein {ECO:0000303|PubMed:24033846}; Short=MrRVP1 {ECO:0000303|PubMed:24033846};","A0A540LRY4_MALBA RecName: Full=TIR domain-containing protein {ECO:0000259|PROSITE:PS50104};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0043531,ADP binding; GO:0050135,NAD(P)+ nucleosidase activity; GO:0061809,NAD+ nucleotidase, cyclic ADP-ribose generating; GO:0042803,protein homodimerization activity; GO:0050832,defense response to fungus; GO:0043068,positive regulation of programmed cell death; GO:0007165,signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016799,hydrolase activity, hydrolyzing N-glycosyl compounds; GO:0003953,NAD+ nucleosidase activity; GO:0005515,protein binding; GO:0042802,identical protein binding; GO:0046983,protein dimerization activity; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0008219,cell death; GO:0009987,cellular process; GO:0010941,regulation of cell death; GO:0010942,positive regulation of cell death; GO:0012501,programmed cell death; GO:0043067,regulation of programmed cell death; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0007154,cell communication; GO:0023052,signaling; GO:0051716,cellular response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01582.23:TIR domain","--","--","--"]
["novel.6112",1.6241,1.9517,1.8766,3.4887,2.8183,3.1233,2.7504,1.8603,2.5088,1.9788,1.9599,2.3982,2.4108,2.0755,2.6178,91,109,103,143,138,147,117,74,127,90,94,136,106,91,115,0.406957739,0.069274108,0.116838033,false,0.675170319,0.002452714,0.005344976,false,1.003039931,"3.618E-06","1.31134E-05","up",0.669073949,0.006641505,0.013121581,false,0.275843137,0.268676873,0.415077787,false,0.009633729,0.968957422,0.984424815,false,-0.336302138,0.158746153,0.614139158,false,0.614098806,0.005555023,0.025022283,false,0.353132546,0.108003851,0.339031795,false,"chr_007",35523283,35526266,"+","--","--","K00924 kinase [EC:2.7.1.-] | (RefSeq) LOW QUALITY PROTEIN: receptor protein kinase TMK1-like (A)","--","probable LRR receptor-like serine/threonine-protein kinase At4g29180 [Pyrus x bretschneideri]","Y4291_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g29180; EC=2.7.11.1; Flags: Precursor;","A0A4Y1RX68_PRUDU SubName: Full=Root hair specific 16 {ECO:0000313|EMBL:BBH08326.1}; Flags: Fragment;","--","GO:0016021,integral component of membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["novel.6176",0,0,0,2.3441,1.2943,1.4334,1.2495,1.3876,2.0596,0,0,0,0.0465,0.0466,0.1861,0,0,0,47,31,33,26,27,51,0,0,0,1,1,4,"NA","NA","NA","NA","NA","NA","NA","NA",8.176458283,"1.54479E-10","1.02972E-09","up",8.133741159,"1.30034E-10","7.96644E-10","up",7.802926882,"9.18265E-10","1.50168E-08","up",4.078446356,"5.84943E-08","1.4287E-06","up",-0.035739699,0.929750326,0.983390582,false,7.848292734,"1.04921E-09","3.45522E-08","up",4.126796277,"6.37113E-08","4.56318E-06","up","chr_007",38928526,38930337,"+","--","--","--","--","uncharacterized protein LOC114822667 [Malus domestica]","--","A0A540KHW6_MALBA RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};","--","GO:0003676,nucleic acid binding; GO:0008270,zinc ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding","PF14223.9:gag-polypeptide of LTR copia-type","--","--","--"]
["novel.6206",0.0234,0,0.0399,1.4838,0.9472,1.3201,1.1006,0.638,0.8298,1.9048,2.3446,2.8471,2.9356,1.8561,1.6335,3,0,5,139,106,142,107,58,96,198,257,369,295,186,164,7.001286719,"3.30567E-35","2.24565E-33","up",6.972587791,"2.26115E-31","7.15838E-30","up",6.106201823,"2.07737E-24","4.966E-23","up",5.636461352,"2.20778E-19","2.8871E-18","up",-1.353618676,"5.52866E-07","5.43416E-06","down",-1.321757881,"3.1927E-05",0.000368746,"down",-0.472062409,0.109922535,0.54626488,false,-0.879681625,0.000361761,0.002687601,false,-0.841323862,0.005201987,0.044806921,false,"chr_007",39994620,40001809,"-","--","--","--","--","--","--","A0A498K380_MALDO RecName: Full=MFS domain-containing protein {ECO:0000259|PROSITE:PS50850};","--","GO:0016021,integral component of membrane; GO:0015144,carbohydrate transmembrane transporter activity; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0022857,transmembrane transporter activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.6243",1.8086,1.6294,3.3159,0.555,0.887,1.1864,0.2674,1.5078,0.6741,4.4337,1.7249,2.6624,1.7404,2.1462,4.9669,98,88,176,22,42,54,11,58,33,195,80,146,74,91,211,0.597135482,0.15098893,0.225465568,false,0.683816067,0.101099158,0.1481527,false,-1.140685259,0.004441798,0.009142657,"down",-1.169444166,0.031917076,0.05394461,false,-1.752380506,0.00270245,0.010200079,"down",-1.838314022,0.001333681,0.008393664,"down",-0.025361252,0.966791313,0.99082905,false,-1.718843666,0.000116822,0.001037291,"down",-1.800855146,"8.2673E-05",0.001886033,"down","chr_008",1310225,1312541,".","--","--","K13466 EIX receptor 1/2 | (RefSeq) receptor-like protein EIX2 (A)","ko04626: Plant-pathogen interaction","receptor-like protein 2 [Malus sylvestris]","PSYR1_ARATH RecName: Full=Tyrosine-sulfated glycopeptide receptor 1 {ECO:0000305}; EC=2.7.11.1 {ECO:0000305}; AltName: Full=PSY1 receptor {ECO:0000303|PubMed:23062058};","A0A5N5GTG8_9ROSA SubName: Full=Receptor-like protein 2 {ECO:0000313|EMBL:KAB2616480.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0042802,identical protein binding; GO:0001653,peptide receptor activity; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0004888,transmembrane signaling receptor activity; GO:0045851,pH reduction; GO:0006468,protein phosphorylation; GO:0031347,regulation of defense response; GO:0009826,unidimensional cell growth; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0038023,signaling receptor activity; GO:0060089,molecular transducer activity; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006885,regulation of pH; GO:0008150,biological_process; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0050801,ion homeostasis; GO:0055067,monovalent inorganic cation homeostasis; GO:0055080,cation homeostasis; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0098771,inorganic ion homeostasis; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0006950,response to stress; GO:0006952,defense response; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050896,response to stimulus; GO:0080134,regulation of response to stress; GO:0000902,cell morphogenesis; GO:0009653,anatomical structure morphogenesis; GO:0016049,cell growth; GO:0032502,developmental process; GO:0040007,growth; GO:0048589,developmental growth; GO:0048856,anatomical structure development; GO:0060560,developmental growth involved in morphogenesis; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF13855.9:Leucine rich repeat","--","--","--"]
["novel.6320",0,0,0,2.1605,1.7081,1.777,3.701,5.1947,3.9848,0.1082,0.5129,0.4338,1.7903,1.0099,0,0,0,0,18,17,17,32,42,41,1,5,5,16,9,0,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",8.326187007,"3.11612E-11","2.03433E-10","up",3.701234613,"1.23022E-09","1.96544E-08","up",2.198008395,0.002552417,0.014286617,"up",1.260269715,0.00173955,0.077951171,false,"NA","NA","NA","NA","NA","NA","NA","NA","chr_008",4029489,4029975,".","--","--","--","--","hypothetical protein C1H46_022558 [Malus baccata]","--","A0A540LZI5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD91848.1};","--","--","--","--","--","--"]
["novel.6403",1.5292,1.9319,1.3876,2.6324,1.9443,3.5062,4.1777,1.9147,1.8807,1.6746,1.5881,2.2385,1.8766,2.6057,1.6615,27,34,24,34,30,52,56,24,30,24,24,40,26,36,23,0.372690211,0.338794355,0.437976814,false,0.631370352,0.108170553,0.157093737,false,0.939855054,0.015182594,0.027692711,false,1.003203039,0.028993017,0.049491753,"up",0.644098347,0.164583202,0.289375492,false,0.384263885,0.401640127,0.596856869,false,0.059939751,0.894779401,0.97544921,false,0.58503466,0.133826843,0.28308067,false,0.332953313,0.392123837,0.674810852,false,"chr_008",8100708,8101677,"-","--","--","--","--","hypothetical protein C1H46_009125 [Malus baccata]","--","A0A540N2H9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE05268.1};","--","--","--","--","--","--"]
["novel.6495",1.403,2.142,1.8059,0.0834,0.2792,0.1452,0,0.2578,0.2026,1.1273,1.1403,0.8438,0.0777,0.2339,0.7781,23,35,29,1,4,2,0,3,3,15,16,14,1,3,10,-0.601917549,0.177899999,0.258386065,false,-2.010016545,0.004104406,0.008518705,"down",-3.145318569,"2.70792E-05","8.45474E-05","down",-3.257668633,"4.68608E-05",0.000137243,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_008",22729917,22730617,".","--","--","--","--","hypothetical protein C1H46_000162 [Malus baccata]","--","A0A540NUH3_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE14243.1};","--","--","--","--","--","--"]
["novel.6581",0.0244,0,0,7.4087,11.6651,3.6248,17.3898,18.3052,10.6768,10.1281,2.86,7.81,7.5121,10.0079,9.5848,2,0,0,445,837,250,1084,1067,792,675,201,649,484,643,617,9.932152163,"1.82083E-14","2.58069E-13","up",10.39823542,"1.1363E-23","2.20664E-22","up",10.09019645,"1.43478E-19","2.32516E-18","up",11.17687902,"4.35541E-26","8.74905E-25","up",1.2583731949999999,0.003475545,0.012693023,"up",0.790610408,0.001624676,0.009887765,false,1.077354176,0.011303669,0.214145336,false,0.182329291,0.724032307,0.843966045,false,-0.278705074,0.475375487,0.740125694,false,"chr_008",29089609,29094474,"-","--","--","K13031 amygdalin beta-glucosidase [EC:3.2.1.117] | (RefSeq) beta-glucosidase 12-like (A)","ko00460: Cyanoamino acid metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","uncharacterized protein LOC126584853 [Malus sylvestris]","BGLS_TRIRP RecName: Full=Non-cyanogenic beta-glucosidase; EC=3.2.1.21; Flags: Precursor;","A0A5H2XN43_PRUDU SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BBN67825.1};","--","GO:0008422,beta-glucosidase activity; GO:0102483,scopolin beta-glucosidase activity; GO:0005975,carbohydrate metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004553,hydrolase activity, hydrolyzing O-glycosyl compounds; GO:0015926,glucosidase activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process","--","--","--","--"]
["novel.6696",1.2706,2.225,3.0422,4.5474,2.855,5.6655,3.0733,1.3017,2.5315,1.1384,2.0242,2.237,2.1491,3.0408,1.5617,55,96,129,144,108,206,101,40,99,40,75,98,73,103,53,-0.088278951,0.818688397,0.867557891,false,0.346271267,0.353533539,0.434132262,false,1.207913057,0.001066645,0.002487363,"up",0.368986273,0.365889227,0.447511144,false,0.468413486,0.237393183,0.379887936,false,0.037318761,0.92286916,0.958481784,false,-0.840379031,0.02258067,0.29241283,false,1.310280449,0.000126549,0.001113564,"up",0.886099054,0.00872863,0.065655405,false,"chr_008",38159251,38161362,"-","--","--","K11816 indole-3-pyruvate monooxygenase [EC:1.14.13.168] | (RefSeq) probable indole-3-pyruvate monooxygenase YUCCA10 (A)","ko00380: Tryptophan metabolism; ko01100: Metabolic pathways","probable indole-3-pyruvate monooxygenase YUCCA10 [Malus sylvestris]","YUC10_ARATH RecName: Full=Probable indole-3-pyruvate monooxygenase YUCCA10; EC=1.14.13.168; AltName: Full=Flavin-containing monooxygenase YUCCA10;","A0A498K5F4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI02658.1};","Flavin-containing monooxygenase","GO:0050660,flavin adenine dinucleotide binding; GO:0103075,indole-3-pyruvate monooxygenase activity; GO:0004497,monooxygenase activity; GO:0050661,NADP binding; GO:0009851,auxin biosynthetic process; GO:0009723,response to ethylene; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0016709,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009850,auxin metabolic process; GO:0009987,cellular process; GO:0010817,regulation of hormone levels; GO:0042445,hormone metabolic process; GO:0042446,hormone biosynthetic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus","PF13738.9:Pyridine nucleotide-disulphide oxidoreductase","--","--","--"]
["novel.6762",0.1651,1.4908,0.5899,1.8055,1.3225,1.769,1.0873,1.1628,0.731,4.0681,5.1115,3.5889,1.3676,2.4264,3.7905,2,18,7,16,14,18,10,10,8,40,53,44,13,23,36,2.689467956,"9.02249E-06","3.94297E-05","up",2.041114476,0.004304388,0.008886011,"up","NA","NA","NA","NA","NA","NA","NA","NA",-1.998971299,"1.36632E-05","9.79844E-05","down",-1.342438149,0.019889633,0.072052076,false,"NA","NA","NA","NA",-1.341603148,0.000884965,0.005669491,"down",-0.685866711,0.184038275,0.456685131,false,"chr_009",2256366,2257010,"-","--","--","--","--","disease resistance protein RGA2-like isoform X3 [Pyrus x bretschneideri]","RGA4_SOLBU RecName: Full=Putative disease resistance protein RGA4; AltName: Full=RGA4-blb;","A0A540NR19_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE13010.1};","--","GO:0043531,ADP binding; GO:0005524,ATP binding; GO:0050832,defense response to fungus; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism","--","--","--","--"]
["novel.6803",5.0833,4.513,4.9233,16.4124,14.5969,28.7516,13.8815,7.5349,15.9674,13.3374,20.0651,22.0188,22.8423,34.3426,21.4246,956,846,907,2258,2399,4542,1982,1006,2713,2036,3230,4191,3371,5054,3159,2.111599816,"3.31142E-28","1.44971E-26","up",2.727369286,"1.58332E-42","8.74139E-41","up",2.240578844,"3.08711E-19","4.8911E-18","up",1.638736221,"1.58251E-10","9.62381E-10","up",-0.459521341,0.113515782,0.217164187,false,-1.072697987,0.000203502,0.001766472,"down",-0.601946472,0.061918829,0.440297477,false,0.14493146,0.603444032,0.761196487,false,-0.462733314,0.101443542,0.326992917,false,"chr_009",5049881,5170361,"-","--","--","K11838 ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1 (A)","ko03083: Polycomb repressive complex","hypothetical protein DVH24_015838 [Malus domestica]","UBP13_ARATH RecName: Full=Ubiquitin C-terminal hydrolase 13 {ECO:0000303|PubMed:11115897}; EC=3.4.19.12 {ECO:0000255|PROSITE-ProRule:PRU10092, ECO:0000255|PROSITE-ProRule:PRU10093}; AltName: Full=Deubiquitinating enzyme 13 {ECO:0000303|PubMed:11115897}; Short=AtUBP13 {ECO:0000303|PubMed:11115897}; AltName: Full=Ubiquitin thioesterase 13 {ECO:0000303|PubMed:11115897}; AltName: Full=Ubiquitin-specific-processing protease 13 {ECO:0000303|PubMed:11115897};","A0A498JKB3_MALDO RecName: Full=MATH domain-containing protein {ECO:0000259|PROSITE:PS50144};","Ubiquitin carboxyl-terminal hydrolase","GO:0005737,cytoplasm; GO:0005829,cytosol; GO:0005634,nucleus; GO:0009506,plasmodesma; GO:0004843,cysteine-type deubiquitinase activity; GO:0004197,cysteine-type endopeptidase activity; GO:0009867,jasmonic acid mediated signaling pathway; GO:0010078,maintenance of root meristem identity; GO:0016579,protein deubiquitination; GO:0070646,protein modification by small protein removal; GO:0031647,regulation of protein stability; GO:2000280,regulation of root development; GO:0006511,ubiquitin-dependent protein catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0019783,ubiquitin-like protein peptidase activity; GO:0101005,deubiquitinase activity; GO:0140096,catalytic activity, acting on a protein; GO:0004175,endopeptidase activity; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009753,response to jasmonic acid; GO:0009755,hormone-mediated signaling pathway; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0033993,response to lipid; GO:0042221,response to chemical; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0070542,response to fatty acid; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071395,cellular response to jasmonic acid stimulus; GO:0071396,cellular response to lipid; GO:0071398,cellular response to fatty acid; GO:0071495,cellular response to endogenous stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0010015,root morphogenesis; GO:0010073,meristem maintenance; GO:0010074,maintenance of meristem identity; GO:0019827,stem cell population maintenance; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048364,root development; GO:0048507,meristem development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0098727,maintenance of cell number; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044238,primary metabolic process; GO:0070647,protein modification by small protein conjugation or removal; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0065008,regulation of biological quality; GO:0050793,regulation of developmental process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0019941,modification-dependent protein catabolic process; GO:0030163,protein catabolic process; GO:0043632,modification-dependent macromolecule catabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0044265,cellular macromolecule catabolic process; GO:0051603,proteolysis involved in protein catabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF00917.29:MATH domain","--","--","--"]
["novel.6944",10.5923,8.5932,9.3446,27.5286,19.6776,30.5131,31.4349,19.249,25.7644,22.0714,24.5206,33.6589,27.2468,41.1938,26.6036,162,131,140,308,263,392,365,209,356,274,321,521,327,493,319,1.677403495,"2.73414E-14","3.78793E-13","up",2.025925838,"5.35408E-19","7.4914E-18","up",1.651755655,"7.46251E-14","7.15412E-13","up",1.704856157,"8.13691E-13","6.25189E-12","up",0.040862332,0.871548678,0.922395422,false,-0.307295272,0.234282928,0.422971782,false,0.051296977,0.836206382,0.961698139,false,-0.007820507,0.973551776,0.986725731,false,-0.350314476,0.154148231,0.413939225,false,"chr_009",24370650,24371555,"+","--","--","--","--","ethylene-responsive transcription factor ERF106-like [Malus domestica]","--","D5L131_MALDO SubName: Full=AP2 domain class transcription factor {ECO:0000313|EMBL:ADE41140.1};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.7012",2.5323,1.8477,1.4688,0,0,0.137,0,0.0811,0,0.1418,0.1345,0.1137,0,0.0735,0,44,32,25,0,0,2,0,1,0,2,2,2,0,1,0,-3.735275096,"8.32695E-07","4.37069E-06","down",-5.924088807,"4.28158E-06","1.52239E-05","down",-5.175790557,"8.6832E-06","2.94811E-05","down",-5.938680373,"4.5453E-06","1.55589E-05","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_009",29737568,29738499,"+","--","--","K01100 sedoheptulose-bisphosphatase [EC:3.1.3.37] | (RefSeq) LOW QUALITY PROTEIN: sedoheptulose-1,7-bisphosphatase, chloroplastic (A)","ko00710: Carbon fixation in photosynthetic organisms; ko01100: Metabolic pathways; ko01200: Carbon metabolism","hypothetical protein DVH24_024258 [Malus domestica]","S17P_SPIOL RecName: Full=Sedoheptulose-1,7-bisphosphatase, chloroplastic; EC=3.1.3.37; AltName: Full=SED(1,7)P2ase; AltName: Full=Sedoheptulose bisphosphatase; Short=SBPase; Flags: Precursor;","A0A498JKV9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH94574.1};","Fructose-1,6-bisphosphatase","GO:0009507,chloroplast; GO:0046872,metal ion binding; GO:0050278,sedoheptulose-bisphosphatase activity; GO:0019253,reductive pentose-phosphate cycle; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity; GO:0005975,carbohydrate metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0015977,carbon fixation; GO:0015979,photosynthesis; GO:0016051,carbohydrate biosynthetic process; GO:0019685,photosynthesis, dark reaction; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.7102",22.9908,32.4572,33.1791,6.7565,7.884,6.0625,5.5239,4.536,8.6207,9.0416,7.9618,10.6553,6.2033,8.9004,9.0743,307,432,434,66,92,68,56,43,104,98,91,144,65,93,95,-1.487048823,"6.41088E-11","6.12704E-10","down",-1.581784591,"1.18052E-11","8.44697E-11","down",-1.874983117,"4.57076E-14","4.48435E-13","down",-1.961143804,"8.66359E-13","6.63257E-12","down",-0.45983145,0.134159209,0.247189887,false,-0.363457305,0.251586485,0.442941391,false,-0.090800666,0.782977662,0.948196918,false,-0.368081143,0.175701181,0.341196726,false,-0.266587698,0.347322092,0.635996152,false,"chr_009",35471453,35472023,".","--","--","--","--","hypothetical protein C1H46_027949 [Malus baccata]","--","A0A540LJ20_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD86460.1};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","--","--","--","--","--"]
["novel.7103",0.7437,0.5596,0.7592,1.186,0.7801,2.656,0.4081,1.1348,1.0289,1.4506,2.6065,1.7758,1.9744,2.7719,1.3438,12,9,12,14,11,36,5,13,15,19,36,29,25,35,17,1.679327571,0.00050412,0.001536749,"up",1.855561294,0.000216414,0.000578011,"up","NA","NA","NA","NA","NA","NA","NA","NA",-1.066506879,0.051128825,0.116624651,false,-1.239433903,0.026179465,0.089077136,false,"NA","NA","NA","NA",-0.30579387,0.579933082,0.743868799,false,-0.472176725,0.395563808,0.677509667,false,"chr_009",35530807,35532309,"+","--","--","--","--","hypothetical protein DVH24_024868 [Malus domestica]","--","A0A498JMV3_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH95184.1};","--","GO:0003677,DNA binding; GO:0016987,sigma factor activity; GO:0071482,cellular response to light stimulus; GO:0006352,DNA-templated transcription initiation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003700,DNA-binding transcription factor activity; GO:0140110,transcription regulator activity; GO:0008150,biological_process; GO:0009314,response to radiation; GO:0009416,response to light stimulus; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071478,cellular response to radiation; GO:0104004,cellular response to environmental stimulus; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process","--","--","--","--"]
["novel.7163",0.7802,1.6027,1.3653,0.0508,0.4251,0.0442,0.4404,0.1047,0.2467,0.1831,0.434,0.257,0.1894,0.5223,0.1422,21,43,36,1,10,1,9,2,6,4,10,7,4,11,3,-1.920189638,0.000793007,0.002301527,"down",-1.841929695,0.003387446,0.007166237,"down",-2.574662668,0.001905598,0.004226056,"down",-1.952142714,0.002142176,0.004690621,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","scaffold2",1201277,1202427,".","--","--","K03070 preprotein translocase subunit SecA [EC:7.4.2.8] | (RefSeq) LOW QUALITY PROTEIN: protein translocase subunit SECA2, chloroplastic (A)","ko03060: Protein export","transposable element gene [Prunus dulcis]","M750_ARATH RecName: Full=Uncharacterized mitochondrial protein AtMg00750; AltName: Full=ORF119;","A0A5H2XL86_PRUDU SubName: Full=Transposable element protein {ECO:0000313|EMBL:BBN67882.1};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0005739,mitochondrion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00665.29:Integrase core domain","--","--","--"]
["novel.7164",2.0502,1.763,3.5131,0.5005,0.0838,0.2615,0.1929,0.4126,0.5673,0.3608,0.5988,0.6511,0.5599,1.0293,0.0934,28,24,47,5,1,3,2,4,7,4,7,9,6,11,1,-1.984709278,0.000466261,0.001433018,"down",-1.822525218,0.007205018,0.014149908,"down",-2.938053058,"5.80922E-05",0.000171388,"down",-2.340835439,0.000308718,0.000785055,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","scaffold2",1203101,1203684,".","--","--","--","--","hypothetical protein C1H46_007832 [Malus baccata]","M860_ARATH RecName: Full=Uncharacterized mitochondrial protein AtMg00860; AltName: Full=ORF158;","A0A540N7X4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE06590.1};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0005739,mitochondrion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00078.30:Reverse transcriptase (RNA-dependent DNA polymerase)","--","--","--"]
["novel.7165",1.7746,2.9103,2.6826,0.3732,0.6639,0.5282,1.1238,0.2404,0.6044,1.0511,1.9935,1.3488,0.8698,0.785,0.74,52,85,77,8,17,13,25,5,16,25,50,40,20,18,17,-0.565629758,0.109952989,0.172775751,false,-1.325608569,0.000330698,0.000853556,"down",-2.003977873,"2.96976E-06","1.09112E-05","down",-1.614223624,0.001444757,0.003268805,"down",-1.038156572,0.069580401,0.149417967,false,-0.275281833,0.643214612,0.789202712,false,"NA","NA","NA","NA",-1.422605771,0.003470962,0.017171524,"down","NA","NA","NA","NA","scaffold2",1204428,1205680,".","--","--","--","--","hypothetical protein C1H46_015737 [Malus baccata]","--","A0A540MIS2_MALBA RecName: Full=RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00012493}; EC=2.7.7.49 {ECO:0000256|ARBA:ARBA00012493};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0003676,nucleic acid binding; GO:0015074,DNA integration; GO:0003674,molecular_function; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process","PF13650.9:Aspartyl protease","--","--","--"]
["novel.7173",0.3149,0.4739,0.643,1.1377,0.4633,0.6963,1.274,1.8061,0.971,0.8314,0.8147,0.6668,1.0606,0.8336,1.3772,14,21,28,37,18,26,43,57,39,30,31,30,37,29,48,0.881383235,0.038397537,0.070416136,false,1.489700631,0.00033415,0.000861538,"up",0.891364275,0.080907558,0.121829662,false,1.792329953,"3.80904E-05",0.000113059,"up",0.920360998,0.018256287,0.050633479,false,0.314605808,0.413849545,0.607628703,false,0.902842862,0.047954673,0.395217596,false,0.022602737,0.960445035,0.980055114,false,-0.577199433,0.190658996,0.465283154,false,"scaffold4",165528,167428,".","--","--","K03883 NADH-ubiquinone oxidoreductase chain 5 [EC:7.1.1.2] | (RefSeq) nad5, C3258_p18; NADH dehydrogenase subunit 5 (A)","ko00190: Oxidative phosphorylation; ko01100: Metabolic pathways","hypothetical protein B456_001G167800 [Gossypium raimondii]","NU5M_MAIZE RecName: Full=NADH-ubiquinone oxidoreductase chain 5; EC=7.1.1.2; AltName: Full=NADH dehydrogenase subunit 5; Flags: Fragment;","A0A0D2LZH8_GOSRA RecName: Full=NADH5_C domain-containing protein {ECO:0000259|Pfam:PF06455};","NADH dehydrogenase subunits 2, 5, and related proteins","GO:0016021,integral component of membrane; GO:0005743,mitochondrial inner membrane; GO:0070469,respirasome; GO:0008137,NADH dehydrogenase (ubiquinone) activity; GO:0042773,ATP synthesis coupled electron transport; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0003954,NADH dehydrogenase activity; GO:0003955,NAD(P)H dehydrogenase (quinone) activity; GO:0005215,transporter activity; GO:0009055,electron transfer activity; GO:0015399,primary active transmembrane transporter activity; GO:0015453,oxidoreduction-driven active transmembrane transporter activity; GO:0016491,oxidoreductase activity; GO:0016651,oxidoreductase activity, acting on NAD(P)H; GO:0016655,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0050136,NADH dehydrogenase (quinone) activity; GO:0006091,generation of precursor metabolites and energy; GO:0006119,oxidative phosphorylation; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009060,aerobic respiration; GO:0009987,cellular process; GO:0015980,energy derivation by oxidation of organic compounds; GO:0022900,electron transport chain; GO:0022904,respiratory electron transport chain; GO:0044237,cellular metabolic process; GO:0045333,cellular respiration; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0005740,mitochondrial envelope; GO:0019866,organelle inner membrane; GO:0031090,organelle membrane; GO:0031966,mitochondrial membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF06455.14:NADH dehydrogenase subunit 5 C-terminus","--","--","--"]
["novel.7174",0.3689,0.2291,0.4125,0.8405,0.4021,0.5229,0.6479,0.7424,0.4861,0.7142,0.9852,1.2325,0.9403,1.5042,0.986,21,13,23,35,20,25,28,30,25,33,48,71,42,67,44,1.725716967,"1.84337E-05","7.56366E-05","up",2.056040059,"1.66475E-07","7.23753E-07","up",1.013131646,0.038165963,0.06297775,false,1.178188448,0.008704388,0.016807655,"up",-0.538408794,0.159489882,0.282436929,false,-0.867574532,0.020705946,0.074330776,false,0.165443002,0.711170644,0.925538802,false,-0.696878892,0.097416831,0.22650271,false,-1.021928519,0.011885875,0.081145981,false,"scaffold4",173086,175519,".","--","--","--","--","hypothetical protein GBA52_015381 [Prunus armeniaca]","--","A0A4P8PJM5_9FABA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:QCQ81888.1};","--","GO:0005739,mitochondrion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.7176",0.1811,0.2544,0.1232,0.6766,0.2349,0.503,0.5407,0.4421,0.6147,0.238,0.1834,0.2744,0.3231,0.3703,0.1386,15,21,10,41,17,35,34,26,46,16,13,23,21,24,9,"NA","NA","NA","NA",0.864887313,0.126920254,0.180519263,false,1.535719541,0.004984522,0.010166322,"up",1.793513119,"4.60939E-05",0.000135129,"up",1.303070125,0.001483056,0.006096626,"up",0.944716337,0.039888961,0.122046181,false,0.261393788,0.558064764,0.87746056,false,1.047379461,0.043829456,0.125056464,false,0.694143908,0.21011974,0.490863797,false,"scaffold4",311683,315224,"+","--","--","--","--","unnamed protein product [Brassica napus]","M030_ARATH RecName: Full=Uncharacterized mitochondrial protein AtMg00030; AltName: Full=ORF107a;","A0A0D3DV04_BRAOL SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo8g097550.1};","--","GO:0005739,mitochondrion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.7177",0.7597,0.4355,0.3508,1.632,1.5938,1.0552,1.6202,1.9365,2.1623,0.7354,1.0355,0.8043,1.0834,0.8322,0.5768,42,24,19,66,77,49,68,76,108,33,49,45,47,36,25,0.91208741,0.027002251,0.052010398,false,0.979387211,0.028633183,0.048619622,false,1.685935163,"5.91344E-05",0.000174325,"up",2.162155473,"1.95721E-09","1.04782E-08","up",1.263744193,"9.34457E-06","6.95603E-05","up",1.199872904,0.000243767,0.002047837,"up",0.476630886,0.120185823,0.562632072,false,0.789838555,0.022639721,0.075726129,false,0.73262584,0.053758329,0.221600528,false,"scaffold4",337797,340160,".","--","--","K02950 small subunit ribosomal protein S12 | (RefSeq) rps12, C3258_p10; ribosomal protein S12 (A)","ko03010: Ribosome","ribosomal protein S12C [Medicago truncatula]","RT12_NICSY RecName: Full=Ribosomal protein S12, mitochondrial;","A0A072TTI0_MEDTR RecName: Full=NADH-ubiquinone oxidoreductase chain 3 {ECO:0000256|ARBA:ARBA00021007}; AltName: Full=NADH dehydrogenase subunit 3 {ECO:0000256|ARBA:ARBA00031029};","Mitochondrial/chloroplast ribosomal protein S12","GO:0005739,mitochondrion; GO:0015935,small ribosomal subunit; GO:0003735,structural constituent of ribosome; GO:0006412,translation; GO:0003674,molecular_function; GO:0005198,structural molecule activity; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005840,ribosome; GO:0032991,protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0044391,ribosomal subunit; GO:1990904,ribonucleoprotein complex","PF00164.28:Ribosomal protein S12/S23","--","--","--"]
["novel.7178",1.2355,0.85,0.5285,3.2331,1.7909,2.2974,2.8054,2.1548,3.191,0.7393,0.9073,1.2673,0.7048,0.9023,0.7054,105,72,44,201,133,164,181,130,245,51,66,109,47,60,47,0.335982499,0.381232416,0.480663842,false,0.106964092,0.771638498,0.821315434,false,1.689898201,"6.47434E-06","2.24656E-05","up",1.912364433,"7.91342E-09","3.93752E-08","up",1.588517608,"6.56043E-09","9.30382E-08","up",1.822797373,"8.42492E-13","5.47283E-11","up",0.225529121,0.415949318,0.813623168,false,1.369042166,"1.75137E-05",0.00020218,"up",1.604720423,"8.20309E-08","5.65605E-06","up","scaffold4",394430,398063,".","--","--","--","--","hypothetical protein GBA52_015457 [Prunus armeniaca]","M030_ARATH RecName: Full=Uncharacterized mitochondrial protein AtMg00030; AltName: Full=ORF107a;","A0A0D3DV04_BRAOL SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo8g097550.1};","--","GO:0005739,mitochondrion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.7181",2.7629,1.8059,1.1111,0.6581,0.3114,0.5731,0.2481,0.4717,0.4633,1.2893,0.9781,0.9927,0.5068,0.5885,0.6941,132,86,52,23,13,23,9,16,20,50,40,48,19,22,26,-0.618074851,0.121303047,0.187529497,false,-1.38407403,0.000996125,0.002349106,"down",-1.687636498,0.000361801,0.000924159,"down",-1.990667306,"2.81461E-05","8.53999E-05","down",-1.355549,0.00163385,0.0066387,"down",-0.589154266,0.218097352,0.403652222,false,-0.299816896,0.571754766,0.882399229,false,-1.053718361,0.012666518,0.048387088,"down",-0.281759531,0.540360643,0.78532489,false,"scaffold5",56713,58755,".","--","--","K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC108171420 (A)","ko00630: Glyoxylate and dicarboxylate metabolism; ko00710: Carbon fixation in photosynthetic organisms; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01200: Carbon metabolism","ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Oreocnide frutescens]","RBL_VIBAC RecName: Full=Ribulose bisphosphate carboxylase large chain {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000255|HAMAP-Rule:MF_01338}; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338}; Flags: Precursor;","A0A6J5UH68_PRUAR RecName: Full=Ribulose bisphosphate carboxylase large chain {ECO:0000256|ARBA:ARBA00017725}; EC=4.1.1.39 {ECO:0000256|ARBA:ARBA00012287};","--","GO:0009507,chloroplast; GO:0000287,magnesium ion binding; GO:0004497,monooxygenase activity; GO:0016984,ribulose-bisphosphate carboxylase activity; GO:0009853,photorespiration; GO:0019253,reductive pentose-phosphate cycle; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0016829,lyase activity; GO:0016830,carbon-carbon lyase activity; GO:0016831,carboxy-lyase activity; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0043094,cellular metabolic compound salvage; GO:0044237,cellular metabolic process; GO:0005975,carbohydrate metabolic process; GO:0009058,biosynthetic process; GO:0015977,carbon fixation; GO:0015979,photosynthesis; GO:0016051,carbohydrate biosynthetic process; GO:0019685,photosynthesis, dark reaction; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00016.23:Ribulose bisphosphate carboxylase large chain, catalytic domain","--","--","--"]
["novel.7183",0.2682,0.346,0.4694,0.419,0.4385,0.4105,0.2019,0.4318,0.3393,0.7553,0.9848,1.0222,0.6836,0.7835,0.391,7,9,12,8,10,9,4,8,8,16,22,27,14,16,8,1.540627447,0.002852629,0.007216063,"up","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-1.40079551,0.015659406,0.04454447,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.075780592,0.041276392,0.119525956,false,"NA","NA","NA","NA","scaffold5",86308,87423,".","--","--","K02938 large subunit ribosomal protein L8e | (RefSeq) 60S ribosomal protein L8-3 (A)","ko03010: Ribosome","ribosomal protein L2 [Mucuna pruriens]","RK2_CARPA RecName: Full=50S ribosomal protein L2, chloroplastic;","A0A873AET9_MUCPR SubName: Full=Ribosomal protein L2 {ECO:0000313|EMBL:QOY46403.1};","Mitochondrial/chloroplast ribosomal protein L2","GO:0009507,chloroplast; GO:0015934,large ribosomal subunit; GO:0019843,rRNA binding; GO:0003735,structural constituent of ribosome; GO:0016740,transferase activity; GO:0006412,translation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0003824,catalytic activity; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005840,ribosome; GO:0032991,protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0044391,ribosomal subunit; GO:1990904,ribonucleoprotein complex","--","--","--","--"]
["novel.7187",1.9686,0.8904,1.0378,0.375,0.2216,0.365,0.1063,0.2728,0.5894,0.3777,0.6975,1.3233,0.2673,0.5155,0.2881,122,55,63,17,12,19,5,12,33,19,37,83,13,25,14,-0.520719636,0.296964682,0.393489522,false,-1.57894762,0.00057612,0.001422458,"down",-1.820267248,"9.7845E-05",0.000277589,"down",-1.734813901,0.002368843,0.005132407,"down",-1.1968681,0.073360701,0.155536951,false,-0.138974209,0.832600752,0.90845328,false,"NA","NA","NA","NA",-1.279815728,0.020616518,0.070600473,false,"NA","NA","NA","NA","scaffold5",160094,162743,".","--","--","--","--","maturase K [Malus sieversii]","MATK_VAUCA RecName: Full=Maturase K {ECO:0000255|HAMAP-Rule:MF_01390}; AltName: Full=Intron maturase {ECO:0000255|HAMAP-Rule:MF_01390};","A0A8K1U647_9ROSA SubName: Full=Maturase K {ECO:0000313|EMBL:UGO90481.1};","--","GO:0009507,chloroplast; GO:0003723,RNA binding; GO:0006397,mRNA processing; GO:0008380,RNA splicing; GO:0008033,tRNA processing; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016071,mRNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006399,tRNA metabolic process; GO:0034470,ncRNA processing; GO:0034660,ncRNA metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF01824.21:MatK/TrnK amino terminal region","--","--","--"]
["novel.7189",0.3319,0.1371,0.1794,0.1601,0.067,0.0581,0.0772,0.055,0.1405,0.3969,0.2281,0.3569,0.2115,0.1497,0.2241,34,14,18,12,6,5,6,4,13,33,20,37,17,12,18,0.789839645,0.112001298,0.175425365,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-1.72949212,0.002648576,0.010030058,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.763171433,0.003362502,0.016758244,"down","NA","NA","NA","NA","scaffold5",193132,197511,".","--","--","--","--","photosystem II CP43 chlorophyll apoprotein [Commiphora foliacea]","PSBD_ACOAM RecName: Full=Photosystem II D2 protein {ECO:0000255|HAMAP-Rule:MF_01383}; Short=PSII D2 protein {ECO:0000255|HAMAP-Rule:MF_01383}; EC=1.10.3.9 {ECO:0000255|HAMAP-Rule:MF_01383}; AltName: Full=Photosystem Q(A) protein {ECO:0000255|HAMAP-Rule:MF_01383};","A0A410P9V9_9ROSI SubName: Full=Photosystem II CP43 chlorophyll apoprotein {ECO:0000313|EMBL:QAT19599.1};","--","GO:0009535,chloroplast thylakoid membrane; GO:0016021,integral component of membrane; GO:0009523,photosystem II; GO:0016168,chlorophyll binding; GO:0045156,electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; GO:0005506,iron ion binding; GO:0010242,oxygen evolving activity; GO:0009772,photosynthetic electron transport in photosystem II; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0009055,electron transfer activity; GO:0016491,oxidoreductase activity; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0006091,generation of precursor metabolites and energy; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009767,photosynthetic electron transport chain; GO:0009987,cellular process; GO:0015979,photosynthesis; GO:0019684,photosynthesis, light reaction; GO:0022900,electron transport chain; GO:0044237,cellular metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity; GO:0031224,intrinsic component of membrane; GO:0009521,photosystem; GO:0032991,protein-containing complex; GO:0098796,membrane protein complex","PF00421.22:Photosystem II protein","--","--","--"]
["novel.7190",0.6088,0.2795,0.3371,0.2257,0.3188,0.3685,0.2175,0.218,0.2284,0.356,0.4581,0.7545,0.4471,0.1319,0.4343,59,27,32,16,27,30,16,15,20,28,38,74,34,10,33,0.539966792,0.229784964,0.31876704,false,0.017626458,0.973721036,0.980058551,false,-0.212025888,0.647498824,0.711543994,false,-0.60596316,0.197893623,0.265446381,false,-1.133034987,0.01053237,0.032052978,"down",-0.607055838,0.265223401,0.457605036,false,-0.397294449,0.371735426,0.792098218,false,-0.73304056,0.094605152,0.221928474,false,-0.204898472,0.703448208,0.876830917,false,"scaffold5",208711,212854,".","--","--","K03940 NADH dehydrogenase (ubiquinone) Fe-S protein 7 [EC:7.1.1.2] | (RefSeq) NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (A)","ko00190: Oxidative phosphorylation; ko01100: Metabolic pathways","NADH-plastoquinone oxidoreductase subunit J [Cormus domestica]","NDHJ_VITVI RecName: Full=NAD(P)H-quinone oxidoreductase subunit J, chloroplastic {ECO:0000255|HAMAP-Rule:MF_01357}; EC=7.1.1.- {ECO:0000255|HAMAP-Rule:MF_01357}; AltName: Full=NAD(P)H dehydrogenase subunit J; AltName: Full=NADH-plastoquinone oxidoreductase subunit J {ECO:0000255|HAMAP-Rule:MF_01357};","A0A3Q8G2S7_9FABA RecName: Full=NAD(P)H-quinone oxidoreductase subunit J, chloroplastic {ECO:0000256|HAMAP-Rule:MF_01357}; EC=7.1.1.- {ECO:0000256|HAMAP-Rule:MF_01357}; AltName: Full=NAD(P)H dehydrogenase, subunit J {ECO:0000256|HAMAP-Rule:MF_01357}; AltName: Full=NADH-plastoquinone oxidoreductase subunit J {ECO:0000256|HAMAP-Rule:MF_01357};","NADH-ubiquinone oxidoreductase, NDUFS3/30 kDa subunit","GO:0009535,chloroplast thylakoid membrane; GO:0008137,NADH dehydrogenase (ubiquinone) activity; GO:0048038,quinone binding; GO:0019684,photosynthesis, light reaction; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0003954,NADH dehydrogenase activity; GO:0003955,NAD(P)H dehydrogenase (quinone) activity; GO:0005215,transporter activity; GO:0009055,electron transfer activity; GO:0015399,primary active transmembrane transporter activity; GO:0015453,oxidoreduction-driven active transmembrane transporter activity; GO:0016491,oxidoreductase activity; GO:0016651,oxidoreductase activity, acting on NAD(P)H; GO:0016655,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; GO:0022804,active transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0050136,NADH dehydrogenase (quinone) activity; GO:0005488,binding; GO:0006091,generation of precursor metabolites and energy; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0015979,photosynthesis; GO:0044237,cellular metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009507,chloroplast; GO:0009526,plastid envelope; GO:0009534,chloroplast thylakoid; GO:0009536,plastid; GO:0009579,thylakoid; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0042170,plastid membrane; GO:0042651,thylakoid membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0055035,plastid thylakoid membrane; GO:0110165,cellular anatomical entity","PF00329.22:Respiratory-chain NADH dehydrogenase, 30 Kd subunit","--","--","--"]
["novel.721",7.5329,5.0232,9.9001,0.0617,0.5678,0.2685,0.1188,0.3812,0.699,0.3334,0.1054,0.0446,0.1724,0.1153,0,167,111,215,1,11,5,2,6,14,6,2,1,3,2,0,-5.40972063,"2.34776E-19","5.27996E-18","down",-5.98741551,"1.89689E-16","2.15827E-15","down",-4.375869156,"6.05043E-16","7.112E-15","down",-3.91513606,"1.83244E-15","1.78796E-14","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",18421911,18422858,"-","--","--","K02111 F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC114822316 (A)","ko00190: Oxidative phosphorylation; ko00195: Photosynthesis; ko01100: Metabolic pathways","uncharacterized protein LOC126633821 [Malus sylvestris]","--","A0A2N9I863_FAGSY RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};","--","GO:0003676,nucleic acid binding; GO:0008270,zinc ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding","PF14223.9:gag-polypeptide of LTR copia-type","--","--","--"]
["novel.722",93.5851,64.8369,75.361,0.6748,1.1297,1.2406,0.7224,0.7726,0.7285,8.5587,7.027,3.8115,3.2151,3.3877,1.8888,5119,3535,4038,27,54,57,30,30,36,380,329,211,138,145,81,-3.399308795,"4.92117E-30","2.49016E-28","down",-4.489853957,"2.45647E-75","4.19404E-73","down",-6.04214976,"2.9046E-119","3.3276E-116","down",-6.437992436,"7.4324E-156","6.3175E-153","down",-3.023966346,"6.18381E-17","2.47754E-15","down",-1.93137842,"4.99808E-09","1.52874E-07","down",-0.392965369,0.28920498,0.7351742,false,-2.631482064,"6.51096E-12","3.33622E-10","down",-1.529355269,"1.52324E-05",0.000474396,"down","chr_0010",18424654,18559506,"-","--","--","--","--","acid phosphatase 1-like [Malus domestica]","PPA1_SOLLC RecName: Full=Acid phosphatase 1; EC=3.1.3.2; AltName: Full=Apase-1(1); Flags: Precursor;","A0A540LZX4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD92044.1};","--","GO:0003993,acid phosphatase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016791,phosphatase activity; GO:0042578,phosphoric ester hydrolase activity","PF03767.17:HAD superfamily, subfamily IIIB (Acid phosphatase)","--","--","--"]
["novel.723",6.5347,4.194,8.7597,3.7746,3.2353,4.7279,2.3764,1.4721,3.8235,2.5616,2.9818,3.7284,1.8786,2.7415,2.5959,594,380,780,251,257,361,164,95,314,189,232,343,134,195,185,-0.881817297,0.001597451,0.004304,false,-1.13892164,"3.68343E-05",0.000112429,"down",-0.518625781,0.068098387,0.104814931,false,-1.068090162,0.002513514,0.005418627,"down",-0.171058536,0.607565983,0.733655811,false,0.088850141,0.788746482,0.882925835,false,-0.548309412,0.096400084,0.523220903,false,0.379384933,0.079294433,0.195026879,false,0.644459378,0.003780723,0.035754984,false,"chr_0010",18505943,18514785,"+","--","--","K15382 solute carrier family 50 (sugar transporter) | (RefSeq) bidirectional sugar transporter SWEET2a-like (A)","--","uncharacterized protein LOC126582282 isoform X4 [Malus sylvestris]","SWET2_ARATH RecName: Full=Bidirectional sugar transporter SWEET2 {ECO:0000303|PubMed:21107422}; Short=AtSWEET2 {ECO:0000303|PubMed:21107422}; AltName: Full=Protein SUGARS WILL EVENTUALLY BE EXPORTED TRANSPORTERS 2 {ECO:0000303|PubMed:21107422};","A0A498J1X5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH88695.1};","Multitransmembrane protein","GO:0016021,integral component of membrane; GO:0005887,integral component of plasma membrane; GO:0051119,sugar transmembrane transporter activity; GO:0008643,carbohydrate transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015144,carbohydrate transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0006810,transport; GO:0008150,biological_process; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005886,plasma membrane; GO:0031226,intrinsic component of plasma membrane; GO:0071944,cell periphery","--","--","--","--"]
["novel.73",0.9476,1.4855,0.9674,1.4573,1.491,1.8332,2.6524,1.8354,1.9667,0.2919,0.346,0.7022,0.7548,1.8922,1.9641,16,25,16,18,22,26,34,22,30,4,5,12,10,25,26,"NA","NA","NA","NA",0.723796533,0.161099564,0.221867759,false,0.703077289,0.120852729,0.173171664,false,1.206454806,0.005926499,0.011841057,"up",2.354139384,"2.46306E-05",0.000166545,"up",0.497023775,0.295845532,0.49126513,false,0.49964771,0.216465379,0.674194484,false,1.857250025,0.001619407,0.00929059,"up",0.00328509,0.994674417,0.998728437,false,"chr_001",4943164,4944178,"-","--","--","--","--","hypothetical protein C1H46_003656 [Malus baccata]","--","A0A540NJF9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE10753.1};","--","--","--","--","--","--"]
["novel.734",1.1051,0.7699,0.7521,0.1678,0.1405,0.3289,0.1213,0.3459,0.1359,0.3782,0.6814,0.5156,0.1174,0.3531,0.2349,36,25,24,4,4,9,3,8,4,10,19,17,3,9,6,-0.558797765,0.226004234,0.314363432,false,-1.612074533,0.006237174,0.012434848,"down",-1.837464596,0.002229593,0.004882419,"down",-1.865912742,0.003352229,0.007049965,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",20269913,20271305,".","--","--","K15032 mTERF domain-containing protein, mitochondrial | (RefSeq) uncharacterized protein LOC103453585 (A)","--","uncharacterized protein LOC103453585 [Malus domestica]","MTEFE_ARATH RecName: Full=Transcription termination factor MTERF15, mitochondrial {ECO:0000305}; AltName: Full=Mitochondrial transcription termination factor 15 {ECO:0000303|PubMed:23087700}; Flags: Precursor;","A0A498H9A1_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH67400.1};","Mitochondrial transcription termination factor, mTERF","GO:0009507,chloroplast; GO:0005739,mitochondrion; GO:0003690,double-stranded DNA binding; GO:0003723,RNA binding; GO:0009658,chloroplast organization; GO:0032502,developmental process; GO:0006353,DNA-templated transcription termination; GO:0006355,regulation of DNA-templated transcription; GO:0000394,RNA splicing, via endonucleolytic cleavage and ligation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009657,plastid organization; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0071840,cellular component organization or biogenesis; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010468,regulation of gene expression; GO:0010556,regulation of macromolecule biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019222,regulation of metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0080090,regulation of primary metabolic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0006396,RNA processing; GO:0008380,RNA splicing; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF02536.17:mTERF","mTERF","TR","mTERF"]
["novel.740",2.7763,2.072,3.4908,4.4893,4.1067,4.6352,4.3704,2.6707,3.9349,5.0053,4.707,3.4122,4.4872,5.3651,3.8866,82,61,101,97,106,115,98,56,105,120,119,102,104,124,90,0.844367694,0.003710366,0.009123683,false,1.016210318,0.000177013,0.00047998,"up",0.882337287,0.000897107,0.002123634,false,0.683715689,0.025575882,0.044314647,false,-0.14905016,0.614026686,0.738881471,false,-0.317598768,0.249343915,0.440450285,false,-0.200989824,0.442819621,0.826877165,false,0.055479699,0.82839916,0.907366785,false,-0.108542676,0.639325903,0.841964907,false,"chr_0010",20641457,20642719,"+","--","--","--","--","hypothetical protein DVH24_004069 [Malus domestica]","--","A0A498K815_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI03417.1};","--","--","--","--","--","--"]
["novel.741",2.0558,2.5782,2.361,4.8477,3.2347,5.0785,4.2649,2.7511,2.7875,3.3559,3.4826,3.3517,3.9953,3.5468,3.2122,40,50,45,69,55,83,63,38,49,53,58,66,61,54,49,0.729053789,0.009561013,0.021106939,false,0.914919629,0.001774449,0.003967893,false,1.117870457,0.0002588,0.000678815,"up",0.771856251,0.022329235,0.039253959,false,0.053922559,0.864771331,0.917736371,false,-0.129150106,0.689340252,0.821962805,false,-0.348416826,0.292672023,0.737895529,false,0.405006315,0.160448638,0.320893089,false,0.227597562,0.438229828,0.713829071,false,"chr_0010",20643509,20644340,".","--","--","--","--","uncharacterized protein LOC126617795 [Malus sylvestris]","--","A0A498IA58_MALDO RecName: Full=MHD domain-containing protein {ECO:0000259|PROSITE:PS51072};","--","--","--","--","--","--"]
["novel.751",1.8802,1.6707,2.1936,3.892,4.2416,3.8372,5.3069,4.9943,5.8272,3.9048,3.0125,2.3355,3.6283,3.5699,4.4538,35,31,40,53,69,60,75,66,98,59,48,44,53,52,65,0.876213023,0.013026885,0.027676862,false,1.31374766,"1.44104E-05","4.70735E-05","up",1.278710923,"2.74857E-05","8.57088E-05","up",1.774088856,"2.7834E-10","1.64986E-09","up",0.91265463,0.002759172,0.010378316,false,0.476199074,0.065652428,0.174759489,false,0.493099566,0.055273175,0.41987604,false,0.420765244,0.205562029,0.379382961,false,-0.009237496,0.973591236,0.992351323,false,"chr_0010",22050857,22051652,".","--","--","--","--","glucose-6-phosphate 1-dehydrogenase 4 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5GZD2_9ROSA SubName: Full=Glucose-6-phosphate 1-dehydrogenase 4 {ECO:0000313|EMBL:KAB2620989.1};","--","--","--","--","--","--"]
["novel.752",0.8136,0.8978,0.8139,3.025,2.3088,3.0994,1.0716,0.7334,1.0806,7.7579,7.0526,10.3377,5.4742,8.5879,9.1733,50,55,49,136,124,160,50,32,60,387,371,643,264,413,442,3.504353412,"1.50627E-49","2.01411E-47","up",3.4892404,"5.88462E-44","3.46243E-42","up",1.948128385,"1.9786E-15","2.21475E-14","up",0.476345953,0.123389018,0.177137638,false,-3.012190176,"4.12913E-31","5.50667E-29","down",-2.996705534,"2.26019E-27","8.01875E-25","down",-1.471569805,"3.52695E-08","4.59386E-05","down",-1.537644265,"1.12483E-11","5.50526E-10","down",-1.517068579,"9.12777E-10","1.13975E-07","down","chr_0010",22102988,22105615,".","--","--","--","--","cyclin-U4-1 [Pyrus ussuriensis x Pyrus communis]","CCU41_ARATH RecName: Full=Cyclin-U4-1; Short=CycU4;1; AltName: Full=Cyclin-P4.1; Short=CycP4;1;","A0A5N5F2W9_9ROSA RecName: Full=Cyclin {ECO:0000256|PIRNR:PIRNR027110};","Cyclin","GO:0019901,protein kinase binding; GO:0007049,cell cycle; GO:0051301,cell division; GO:0000079,regulation of cyclin-dependent protein serine/threonine kinase activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0019899,enzyme binding; GO:0019900,kinase binding; GO:0008150,biological_process; GO:0009987,cellular process; GO:0001932,regulation of protein phosphorylation; GO:0006468,protein phosphorylation; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0016310,phosphorylation; GO:0019220,regulation of phosphate metabolic process; GO:0019222,regulation of metabolic process; GO:0019538,protein metabolic process; GO:0031323,regulation of cellular metabolic process; GO:0031399,regulation of protein modification process; GO:0036211,protein modification process; GO:0042325,regulation of phosphorylation; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0043549,regulation of kinase activity; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0045859,regulation of protein kinase activity; GO:0050789,regulation of biological process; GO:0050790,regulation of catalytic activity; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051174,regulation of phosphorus metabolic process; GO:0051246,regulation of protein metabolic process; GO:0051338,regulation of transferase activity; GO:0051726,regulation of cell cycle; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0065009,regulation of molecular function; GO:0071704,organic substance metabolic process; GO:0071900,regulation of protein serine/threonine kinase activity; GO:0080090,regulation of primary metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1904029,regulation of cyclin-dependent protein kinase activity","PF08613.14:Cyclin","--","--","--"]
["novel.753",0.2469,0.2201,0.168,0.8999,0.6591,0.7837,0.6864,0.3091,0.3643,0.811,1.2497,1.6803,0.769,1.6124,2.0641,9,8,6,24,21,24,19,8,12,24,39,62,22,46,59,2.741821766,"7.20243E-08","4.50644E-07","up",3.089879343,"5.41127E-09","2.86541E-08","up",2.0900046,"7.86876E-05",0.000227265,"up","NA","NA","NA","NA",-1.349156295,0.008011805,0.025629883,"down",-1.696750561,0.001271917,0.008063632,"down",-0.714383631,0.163895641,0.618528288,false,-0.635639144,0.132529213,0.281110869,false,-0.976709178,0.03058906,0.154639562,false,"chr_0010",22111707,22113488,"-","--","--","K10863 aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] | (RefSeq) transcription factor bHLH140 (A)","ko03410: Base excision repair","hypothetical protein DVH24_000519 [Malus domestica]","BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic helix-loop-helix protein 140; Short=AtbHLH140; Short=bHLH 140; AltName: Full=Transcription factor EN 122; AltName: Full=bHLH transcription factor bHLH140;","A0A498J074_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH88920.1};","Polynucleotide kinase 3' phosphatase","GO:0005634,nucleus; GO:0047627,adenylylsulfatase activity; GO:0005524,ATP binding; GO:0033699,DNA 5'-adenosine monophosphate hydrolase activity; GO:0003725,double-stranded RNA binding; GO:0046872,metal ion binding; GO:0030983,mismatched DNA binding; GO:0046983,protein dimerization activity; GO:1990165,single-strand break-containing DNA binding; GO:0003697,single-stranded DNA binding; GO:0006260,DNA replication; GO:0006302,double-strand break repair; GO:0009150,purine ribonucleotide metabolic process; GO:0000012,single strand break repair; GO:0006790,sulfur compound metabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016817,hydrolase activity, acting on acid anhydrides; GO:0016819,hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0004518,nuclease activity; GO:0004527,exonuclease activity; GO:0004529,exodeoxyribonuclease activity; GO:0004536,deoxyribonuclease activity; GO:0008409,5'-3' exonuclease activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016796,exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters; GO:0016895,exodeoxyribonuclease activity, producing 5'-phosphomonoesters; GO:0035312,5'-3' exodeoxyribonuclease activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0043169,cation binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0005515,protein binding; GO:0003684,damaged DNA binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0006281,DNA repair; GO:0006950,response to stress; GO:0006974,cellular response to DNA damage stimulus; GO:0033554,cellular response to stress; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0006163,purine nucleotide metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0009117,nucleotide metabolic process; GO:0009259,ribonucleotide metabolic process; GO:0019637,organophosphate metabolic process; GO:0019693,ribose phosphate metabolic process; GO:0044281,small molecule metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0072521,purine-containing compound metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.757",0.7448,0.967,0.8051,2.0363,1.4038,1.5126,0.6925,0.6789,0.8729,1.0795,1.0237,1.3853,0.2792,0.5599,1.2853,17,22,18,34,28,29,12,11,18,20,20,32,5,10,23,0.662486513,0.122939602,0.189535522,false,"NA","NA","NA","NA",1.185837865,0.004367523,0.009003462,"up","NA","NA","NA","NA",-0.528085328,0.258325811,0.403608327,false,"NA","NA","NA","NA",-1.06634904,0.016451925,0.256662602,false,0.541255704,0.183985068,0.351844794,false,1.171696792,0.041830279,0.189082137,false,"chr_0010",22683105,22684080,".","--","--","--","--","uncharacterized protein LOC126599225 [Malus sylvestris]","--","A0A498IA58_MALDO RecName: Full=MHD domain-containing protein {ECO:0000259|PROSITE:PS51072};","--","--","--","--","--","--"]
["novel.759",5.0636,5.4001,7.713,6.3768,3.6271,6.5977,4.3589,4.0437,3.8174,8.596,11.1095,13.2565,8.5869,11.8974,6.7891,254,270,379,234,159,278,166,144,173,350,477,673,338,467,267,1.045907563,"3.95679E-06","1.85569E-05","up",0.882196746,0.000502583,0.001254526,false,0.077736562,0.781074277,0.825727767,false,-0.283641002,0.204844086,0.273511582,false,-1.318426704,"4.40185E-10","7.55979E-09","down",-1.151819456,"3.66287E-06","5.63439E-05","down",-0.361401323,0.16656541,0.621753265,false,-0.951980794,0.000353611,0.0026381,false,-0.780690615,0.00765345,0.05961831,false,"chr_0010",22735276,22739638,"+","--","--","--","--","protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic [Malus sylvestris]","HC173_ARATH RecName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic {ECO:0000303|PubMed:17435084}; Flags: Precursor;","A0A540L120_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD79962.1};","Predicted dehydrogenase","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0031969,chloroplast membrane; GO:0009570,chloroplast stroma; GO:0009535,chloroplast thylakoid membrane; GO:0009523,photosystem II; GO:0042651,thylakoid membrane; GO:0003729,mRNA binding; GO:0003723,RNA binding; GO:0010207,photosystem II assembly; GO:0006413,translational initiation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006091,generation of precursor metabolites and energy; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0015979,photosynthesis; GO:0016043,cellular component organization; GO:0019684,photosynthesis, light reaction; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0065003,protein-containing complex assembly; GO:0071840,cellular component organization or biogenesis; GO:0006412,translation; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0042170,plastid membrane; GO:0009532,plastid stroma; GO:0009534,chloroplast thylakoid; GO:0009579,thylakoid; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment; GO:0034357,photosynthetic membrane; GO:0055035,plastid thylakoid membrane; GO:0009521,photosystem; GO:0032991,protein-containing complex; GO:0098796,membrane protein complex","PF13460.9:NAD(P)H-binding","--","--","--"]
["novel.763",8.5877,13.8783,18.5953,0.4538,0.2026,0.4479,0.0583,0.5924,0.49,5.6172,5.1458,2.3181,1.4385,1.4991,1.6938,388,625,823,15,8,17,2,19,20,206,199,106,51,53,60,-1.453446284,"9.74879E-05",0.000349705,"down",-2.849575094,"1.04731E-22","1.89665E-21","down",-5.014371195,"1.86346E-36","9.37584E-35","down",-4.885609528,"4.92027E-10","2.83459E-09","down",-3.419700959,"7.51272E-09","1.05334E-07","down",-2.017066287,0.000298585,0.002446046,"down","NA","NA","NA","NA",-3.54625311,"6.84043E-14","4.81834E-12","down",-2.140364063,"1.27093E-07","8.40753E-06","down","chr_0010",23192176,23195885,"+","--","--","K15813 beta-amyrin synthase [EC:5.4.99.39] | (RefSeq) beta-amyrin synthase-like (A)","ko00909: Sesquiterpenoid and triterpenoid biosynthesis; ko00999: Biosynthesis of various plant secondary metabolites; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","beta-amyrin synthase-like isoform X1 [Malus sylvestris]","BAMS_BETPL RecName: Full=Beta-amyrin synthase; EC=5.4.99.39;","C7SCX1_MALDO RecName: Full=Terpene cyclase/mutase family member {ECO:0000256|RuleBase:RU362003}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362003};","Oxidosqualene-lanosterol cyclase and related proteins","GO:0005811,lipid droplet; GO:0042300,beta-amyrin synthase activity; GO:0019745,pentacyclic triterpenoid biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016853,isomerase activity; GO:0016866,intramolecular transferase activity; GO:0031559,oxidosqualene cyclase activity; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0006722,triterpenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016104,triterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0019742,pentacyclic triterpenoid metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0071704,organic substance metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF13249.9:Squalene-hopene cyclase N-terminal domain","--","--","--"]
["novel.767",7.9677,7.4179,8.6243,14.4127,12.7065,14.6811,14.3448,11.7685,12.6453,9.8654,10.7431,11.4595,10.3068,12.3483,10.384,597,554,633,790,832,924,816,626,856,600,689,869,606,724,610,0.604778651,"2.87847E-06","1.38379E-05",false,0.753271777,"1.13668E-07","5.0556E-07",false,1.013416989,"3.58561E-14","3.5482E-13","up",0.976388538,"1.96423E-10","1.18243E-09",false,0.383969291,0.009956534,0.030612112,false,0.237370791,0.140228116,0.298825972,false,-0.03973599,0.79136034,0.950542414,false,0.42591061,0.001090345,0.006700934,false,0.285238671,0.049920138,0.211369546,false,"chr_0010",23511710,23517042,"-","--","--","K00213 7-dehydrocholesterol reductase [EC:1.3.1.21] | (RefSeq) LOW QUALITY PROTEIN: 7-dehydrocholesterol reductase-like (A)","ko00100: Steroid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Malus domestica]","PPR46_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At1g16830;","A0A5N5GH95_9ROSA SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:KAB2613231.1};","FOG: PPR repeat","--","PF13041.9:PPR repeat family","--","--","--"]
["novel.770",2.9722,2.3962,3.5399,0.7013,1.0325,0.8846,0.7923,1.0716,1.4491,1.8091,2.1083,1.818,1.0822,0.9948,0.9703,168,135,196,29,51,42,34,43,74,83,102,104,48,44,43,-0.448647531,0.048687068,0.086323366,false,-1.251777951,"1.21529E-06","4.68554E-06","down",-1.540800667,"1.10741E-07","5.00462E-07","down",-1.141196356,"9.19279E-05",0.000255857,"down",-0.679323955,0.021837797,0.058637345,false,0.126501871,0.703361077,0.83101832,false,0.396813347,0.278387256,0.726306629,false,-1.074957048,0.000240001,0.001901981,"down",-0.262833153,0.423350396,0.701863601,false,"chr_0010",23760772,23763417,"-","--","--","--","--","hypothetical protein DVH24_000630 [Malus domestica]","--","A0A498J6E9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89031.1};","--","--","--","--","--","--"]
["novel.771",5.2335,5.6347,5.2123,2.4428,1.3146,2.2794,1.233,2.3974,1.8367,2.254,2.8831,2.2702,2.6027,1.9031,2.7135,123,132,120,42,27,45,22,40,39,43,58,54,48,35,50,-0.936776082,"9.37339E-05",0.000337385,false,-0.862580017,0.00087884,0.00209341,false,-1.212710912,"4.81338E-05",0.000144106,"down",-1.278702591,"3.08479E-05","9.30096E-05","down",-0.328284014,0.36902713,0.522431331,false,-0.398211247,0.291113863,0.48622869,false,-0.063582421,0.878550363,0.971888143,false,-0.260317658,0.464514773,0.64998577,false,-0.32513636,0.372826153,0.65872383,false,"chr_0010",23789650,23790939,"-","--","--","--","--","hypothetical protein DVH24_009662 [Malus domestica]","--","A0A498JMP5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH96820.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.775",13.0634,12.2809,12.2803,2.9869,1.7476,3.9719,2.2592,1.8533,2.8347,4.7761,5.1605,4.3876,2.9942,3.0926,2.8469,556,521,512,93,65,142,73,56,109,165,188,189,100,103,95,-1.209706847,"3.80058E-15","5.7982E-14","down",-1.782445404,"9.23293E-27","2.22805E-25","down",-1.912386856,"2.5009E-12","2.03141E-11","down",-2.151704737,"3.19934E-27","6.8132E-26","down",-0.93166694,"6.52897E-05",0.000394684,false,-0.35515928,0.153377564,0.317482035,false,-0.243105671,0.470049535,0.842241788,false,-0.689611225,0.021993672,0.074113766,false,-0.106685732,0.728231156,0.888835005,false,"chr_0010",24058550,24061588,"-","--","--","K23280 rhamnogalacturonan I rhamnosyltransferase [EC:2.4.1.351] | (RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like (A)","--","protein MANNAN SYNTHESIS-RELATED 1-like [Malus sylvestris]","MSR1_ARATH RecName: Full=Protein MANNAN SYNTHESIS-RELATED 1 {ECO:0000303|PubMed:22966747}; Short=AtMSR1 {ECO:0000303|PubMed:22966747}; EC=2.4.1.- {ECO:0000305}; AltName: Full=O-fucosyltransferase 25 {ECO:0000305}; Short=O-FucT-25 {ECO:0000305}; AltName: Full=O-fucosyltransferase family protein {ECO:0000312|EMBL:ARJ31429.1};","A0A498J5B1_MALDO RecName: Full=O-fucosyltransferase family protein {ECO:0000256|ARBA:ARBA00030350};","--","GO:0005768,endosome; GO:0005794,Golgi apparatus; GO:0005797,Golgi medial cisterna; GO:0000139,Golgi membrane; GO:0016021,integral component of membrane; GO:0005802,trans-Golgi network; GO:0051753,mannan synthase activity; GO:0052325,cell wall pectin biosynthetic process; GO:0006004,fucose metabolic process; GO:0010412,mannan metabolic process; GO:0097502,mannosylation; GO:0000030,mannosyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0019187,beta-1,4-mannosyltransferase activity; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009664,plant-type cell wall organization; GO:0009832,plant-type cell wall biogenesis; GO:0009987,cellular process; GO:0010383,cell wall polysaccharide metabolic process; GO:0010393,galacturonan metabolic process; GO:0016043,cellular component organization; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0042546,cell wall biogenesis; GO:0043170,macromolecule metabolic process; GO:0044036,cell wall macromolecule metabolic process; GO:0044038,cell wall macromolecule biosynthetic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0045229,external encapsulating structure organization; GO:0045488,pectin metabolic process; GO:0045489,pectin biosynthetic process; GO:0052546,cell wall pectin metabolic process; GO:0070589,cellular component macromolecule biosynthetic process; GO:0070592,cell wall polysaccharide biosynthetic process; GO:0071554,cell wall organization or biogenesis; GO:0071555,cell wall organization; GO:0071669,plant-type cell wall organization or biogenesis; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:1901576,organic substance biosynthetic process; GO:0005996,monosaccharide metabolic process; GO:0019318,hexose metabolic process; GO:0044281,small molecule metabolic process; GO:0070085,glycosylation; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0110165,cellular anatomical entity; GO:0005795,Golgi stack; GO:0031984,organelle subcompartment; GO:0031985,Golgi cisterna; GO:0098791,Golgi apparatus subcompartment; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle; GO:0031224,intrinsic component of membrane","PF10250.12:GDP-fucose protein O-fucosyltransferase","--","--","--"]
["novel.777",0.6718,0.9099,1.4059,1.7908,1.3453,2.2394,1.6371,0.899,1.4501,1.076,1.2951,1.5599,1.4126,1.5454,1.371,20,27,41,39,35,56,37,19,39,26,33,47,33,36,32,0.590156101,0.147068107,0.220632026,false,0.833982869,0.032619661,0.054644222,false,1.059303939,0.009095715,0.017491139,"up",0.707302012,0.106233369,0.155656163,false,0.129530312,0.739522875,0.832351485,false,-0.110484684,0.76820972,0.870543308,false,-0.353231123,0.353487051,0.780136532,false,0.484909334,0.175292669,0.340754161,false,0.250541571,0.461547029,0.730493231,false,"chr_0010",24296022,24297294,"+","--","--","--","--","uncharacterized protein LOC126617795 [Malus sylvestris]","--","A0A498IA58_MALDO RecName: Full=MHD domain-containing protein {ECO:0000259|PROSITE:PS51072};","--","--","--","--","--","--"]
["novel.781",6.5141,5.2057,5.0493,0.8675,0.9184,1.4221,1.303,1.7089,1.2189,2.2075,2.9656,1.918,1.9742,1.3357,1.6903,349,278,265,34,43,64,53,65,59,96,136,104,83,56,71,-1.063465251,"5.06334E-06","2.32557E-05","down",-1.453404585,"1.20785E-09","6.95443E-09","down",-2.176889159,"4.05522E-16","4.83542E-15","down",-1.709187606,"1.1892E-11","8.11252E-11","down",-0.632961176,0.032773542,0.081850293,false,-0.238817702,0.432213083,0.623696754,false,0.471215097,0.160070511,0.615525577,false,-1.100778103,0.000521158,0.003639389,"down",-0.699947196,0.030753471,0.155122398,false,"chr_0010",24524273,24527661,"-","--","--","K12450 UDP-glucose 4,6-dehydratase [EC:4.2.1.76] | (RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (A)","ko00520: Amino sugar and nucleotide sugar metabolism; ko01100: Metabolic pathways; ko01250: Biosynthesis of nucleotide sugars","hypothetical protein DVH24_032700 [Malus domestica]","RHM1_ARATH RecName: Full=Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 {ECO:0000305|PubMed:17190829}; AltName: Full=Protein REPRESSOR OF LRX1 1 {ECO:0000303|PubMed:18567791}; AltName: Full=Rhamnose biosynthetic enzyme 1; Short=AtRHM1; Includes: RecName: Full=UDP-glucose 4,6-dehydratase {ECO:0000305|PubMed:17190829}; EC=4.2.1.76 {ECO:0000305|PubMed:17190829}; Includes: RecName: Full=UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose 4-keto-reductase {ECO:0000305|PubMed:17190829}; EC=1.1.1.- {ECO:0000305|PubMed:17190829}; EC=5.1.3.- {ECO:0000305|PubMed:17190829};","A0A498J948_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH90343.1};","Putative NAD+-dependent epimerases","GO:0005829,cytosol; GO:0005739,mitochondrion; GO:0009506,plasmodesma; GO:0008460,dTDP-glucose 4,6-dehydratase activity; GO:0016853,isomerase activity; GO:0016491,oxidoreductase activity; GO:0050377,UDP-glucose 4,6-dehydratase activity; GO:0010280,UDP-L-rhamnose synthase activity; GO:0010315,auxin export across the plasma membrane; GO:0030154,cell differentiation; GO:0071555,cell wall organization; GO:0051555,flavonol biosynthetic process; GO:0042127,regulation of cell population proliferation; GO:0010253,UDP-rhamnose biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016829,lyase activity; GO:0016835,carbon-oxygen lyase activity; GO:0016836,hydro-lyase activity; GO:0016740,transferase activity; GO:0006810,transport; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009733,response to auxin; GO:0009734,auxin-activated signaling pathway; GO:0009755,hormone-mediated signaling pathway; GO:0009914,hormone transport; GO:0009966,regulation of signal transduction; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0010817,regulation of hormone levels; GO:0010928,regulation of auxin mediated signaling pathway; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051716,cellular response to stimulus; GO:0055085,transmembrane transport; GO:0060918,auxin transport; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0140115,export across plasma membrane; GO:0140352,export from cell; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009812,flavonoid metabolic process; GO:0009813,flavonoid biosynthetic process; GO:0042440,pigment metabolic process; GO:0046148,pigment biosynthetic process; GO:0051552,flavone metabolic process; GO:0051553,flavone biosynthetic process; GO:0051554,flavonol metabolic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:1901615,organic hydroxy compound metabolic process; GO:1901617,organic hydroxy compound biosynthetic process; GO:0008283,cell population proliferation; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006793,phosphorus metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009225,nucleotide-sugar metabolic process; GO:0009226,nucleotide-sugar biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0033478,UDP-rhamnose metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0044281,small molecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction","PF16363.8:GDP-mannose 4,6 dehydratase","--","--","--"]
["novel.790",0.2076,0.3749,0.2967,2.4403,2.0903,1.0873,1.1484,2.3977,2.2517,1.1764,1.2126,0.7794,0.6878,0.5305,0.6354,5,9,7,43,44,22,21,41,49,23,25,19,13,10,12,2.032218952,0.000294743,0.000949003,"up","NA","NA","NA","NA",2.900441805,"3.35299E-07","1.41362E-06","up",3.001967681,"2.41411E-08","1.13084E-07","up",0.984720413,0.028179936,0.072304152,false,1.648690092,0.000612851,0.004415367,"up",0.101779066,0.82922205,0.959693929,false,0.884858659,0.065545469,0.169256729,false,1.555250155,0.002147077,0.023757557,"up","chr_0010",24967980,24969567,"-","--","--","K11000 callose synthase [EC:2.4.1.-] | (RefSeq) LOW QUALITY PROTEIN: callose synthase 7 (A)","--","callose synthase 7-like isoform X3 [Malus sylvestris]","CALS7_ARATH RecName: Full=Callose synthase 7; EC=2.4.1.34; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 7;","A0A540L3Y0_MALBA RecName: Full=1,3-beta-glucan synthase {ECO:0000256|ARBA:ARBA00012589}; EC=2.4.1.34 {ECO:0000256|ARBA:ARBA00012589}; AltName: Full=1,3-beta-glucan synthase {ECO:0000256|ARBA:ARBA00032165};","1,3-beta-glucan synthase/callose synthase catalytic subunit","GO:0000148,1,3-beta-D-glucan synthase complex; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0003843,1,3-beta-D-glucan synthase activity; GO:0046527,glucosyltransferase activity; GO:0006075,(1->3)-beta-D-glucan biosynthetic process; GO:0080165,callose deposition in phloem sieve plate; GO:0071555,cell wall organization; GO:0010233,phloem transport; GO:0008360,regulation of cell shape; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0035251,UDP-glucosyltransferase activity; GO:0000271,polysaccharide biosynthetic process; GO:0005975,carbohydrate metabolic process; GO:0005976,polysaccharide metabolic process; GO:0006073,cellular glucan metabolic process; GO:0006074,(1->3)-beta-D-glucan metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009250,glucan biosynthetic process; GO:0009987,cellular process; GO:0016051,carbohydrate biosynthetic process; GO:0033692,cellular polysaccharide biosynthetic process; GO:0034637,cellular carbohydrate biosynthetic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044042,glucan metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044262,cellular carbohydrate metabolic process; GO:0044264,cellular polysaccharide metabolic process; GO:0051273,beta-glucan metabolic process; GO:0051274,beta-glucan biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901576,organic substance biosynthetic process; GO:0033036,macromolecule localization; GO:0033037,polysaccharide localization; GO:0051179,localization; GO:0052545,callose localization; GO:0016043,cellular component organization; GO:0045229,external encapsulating structure organization; GO:0071554,cell wall organization or biogenesis; GO:0071840,cellular component organization or biogenesis; GO:0003008,system process; GO:0003013,circulatory system process; GO:0003018,vascular process in circulatory system; GO:0006810,transport; GO:0010232,vascular transport; GO:0032501,multicellular organismal process; GO:0051234,establishment of localization; GO:0000902,cell morphogenesis; GO:0009653,anatomical structure morphogenesis; GO:0022603,regulation of anatomical structure morphogenesis; GO:0022604,regulation of cell morphogenesis; GO:0032502,developmental process; GO:0048856,anatomical structure development; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0016020,membrane; GO:0032991,protein-containing complex; GO:0071944,cell periphery; GO:0098796,membrane protein complex; GO:0098797,plasma membrane protein complex; GO:0110165,cellular anatomical entity; GO:1902494,catalytic complex; GO:1990234,transferase complex; GO:0031224,intrinsic component of membrane","PF02364.18:1,3-beta-glucan synthase component","--","--","--"]
["novel.795",1.86,0.6665,2.5769,0.0259,0.0869,0.0452,0.05,0.0267,0.084,0.3975,0.1774,0.15,0.1209,0.0243,0.1453,98,35,133,1,4,2,2,1,4,17,8,8,5,1,6,-2.621559236,"1.0534E-05","4.54504E-05","down",-3.833526186,"1.29099E-08","6.51938E-08","down",-4.755441718,"8.96931E-10","5.44225E-09","down",-4.662515648,"9.99146E-10","5.54977E-09","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",25240866,25243118,".","--","--","K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1-like (A)","ko04626: Plant-pathogen interaction","putative RNA-directed DNA polymerase [Rosa chinensis]","--","A0A2P6P3T2_ROSCH SubName: Full=Putative RNA-directed DNA polymerase {ECO:0000313|EMBL:PRQ16575.1}; EC=2.7.7.49 {ECO:0000313|EMBL:PRQ16575.1};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0003676,nucleic acid binding; GO:0003964,RNA-directed DNA polymerase activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034061,DNA polymerase activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid","--","--","--","--"]
["novel.797",2.5628,4.9218,2.4667,0.1001,0.5027,0.523,0.0964,0.1031,0.2431,1.8944,2.1386,0.9405,1.213,1.7779,0.7471,35,67,33,1,6,6,1,1,3,21,25,13,13,19,8,-0.826782323,0.093116968,0.150245384,false,-1.123087855,0.026486247,0.04540214,"down",-2.904216258,"1.12278E-05","3.74253E-05","down",-4.171089765,"4.19536E-07","1.66995E-06","down",-3.340224048,0.000218225,0.001148796,"down","NA","NA","NA","NA","NA","NA","NA","NA",-2.070747746,0.006268668,0.027593448,"down","NA","NA","NA","NA","chr_0010",25420809,25421392,".","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["novel.798",3.1472,6.7954,1.3969,0.1871,0,0.5702,0,0.3855,0.4544,0.2529,1.3589,1.4196,0.5231,0.2623,0,46,99,20,2,0,7,0,4,6,3,17,21,6,3,0,-1.73488835,0.014340785,0.030076906,"down",-3.559327071,"2.06193E-05","6.56637E-05","down",-3.729179381,"3.64228E-05",0.000111568,"down",-3.477531145,"3.06562E-05","9.24876E-05","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",25425879,25426503,".","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["novel.8",1.3369,1.4515,1.5704,0.751,0.2515,0.3488,0.4824,0.2838,0.527,0.2707,0.4065,0.2533,0.3734,0.2106,0.2569,73,79,84,30,12,16,20,11,26,12,19,14,16,9,11,-2.050512691,"7.78619E-09","5.59829E-08","down",-2.077565537,"5.18014E-08","2.41754E-07","down",-1.491713188,0.000615049,0.001504835,"down",-1.460452925,"3.43961E-05",0.000102853,"down",0.594403113,0.245150195,0.388861762,false,0.626593728,0.242420516,0.433180823,false,0.019244933,0.972932312,0.992299812,false,"NA","NA","NA","NA","NA","NA","NA","NA","chr_001",492625,494959,".","--","--","K13210 far upstream element-binding protein | (RefSeq) far upstream element-binding protein 2 isoform X1 (A)","--","hypothetical protein DVH24_003291 [Malus domestica]","PAP13_ARATH RecName: Full=Probable plastid-lipid-associated protein 13, chloroplastic; AltName: Full=Fibrillin-7b; Short=AtPGL30; Flags: Precursor;","A0A498INI9_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH82793.1};","K-homology type RNA binding proteins","GO:0009507,chloroplast; GO:0009570,chloroplast stroma; GO:0009534,chloroplast thylakoid; GO:0005829,cytosol; GO:0010287,plastoglobule; GO:0009579,thylakoid; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009532,plastid stroma; GO:0031976,plastid thylakoid; GO:0031984,organelle subcompartment","--","--","--","--"]
["novel.803",0,0.0216,0,1.0302,1.429,1.9737,0.8225,0.5459,1.001,1.4589,0.4528,1.7871,1.0427,1.8436,0.6316,0,1,0,35,58,77,29,18,42,55,18,84,38,67,23,7.510728654,"1.37413E-08","9.55683E-08","up",7.528131844,"4.57422E-09","2.4432E-08","up",7.77999818,"4.78593E-10","3.01446E-09","up",6.947271851,"5.26524E-08","2.34985E-07","up",-0.546668888,0.313487671,0.464572766,false,-0.564070474,0.232600423,0.421115572,false,-0.831564462,0.033738336,0.347541413,false,0.290576296,0.575761213,0.740793797,false,0.277748798,0.537803583,0.783992832,false,"chr_0010",25812357,25814342,".","--","--","--","--","hypothetical protein C1H46_002768 [Malus baccata]","--","A0A540NKK2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE11566.1};","--","--","--","--","--","--"]
["novel.804",2.0397,1.0291,1.4246,12.9951,21.3063,10.1956,13.5273,21.5397,14.7208,19.0299,15.2312,17.2659,23.3631,12.7432,19.2911,171,86,117,797,1561,718,861,1282,1115,1295,1093,1465,1537,836,1268,3.709681753,"1.19302E-46","1.38254E-44","up",3.918330723,"6.89443E-40","3.43408E-38","up",3.537433443,"9.54368E-23","2.04069E-21","up",3.756382636,"3.65975E-37","1.34251E-35","up",0.059863922,0.800521453,0.875644514,false,-0.147192749,0.597714604,0.756844675,false,0.213292685,0.532022473,0.868006847,false,-0.151333027,0.627061197,0.776766721,false,-0.352177853,0.304052446,0.596384889,false,"chr_0010",25733959,25754372,"-","--","--","K23279 gallate 1-beta-glucosyltransferase [EC:2.4.1.136] | (RefSeq) putative UDP-glucose glucosyltransferase (A)","ko00999: Biosynthesis of various plant secondary metabolites","7-deoxyloganetin glucosyltransferase-like [Malus sylvestris]","UGT6_CATRO RecName: Full=7-deoxyloganetin glucosyltransferase; EC=2.4.1.324; AltName: Full=Iridoid 1-O-glucosyltransferase; AltName: Full=UDP-glucose glucosyltransferase 6; Short=CrUGT6; AltName: Full=UDP-glycosyltransferase 85A23;","A0A540N6L2_MALBA RecName: Full=Glycosyltransferase {ECO:0000256|RuleBase:RU362057}; EC=2.4.1.- {ECO:0000256|RuleBase:RU362057};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0035251,UDP-glucosyltransferase activity; GO:1900994,(-)-secologanin biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0006081,cellular aldehyde metabolic process; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016098,monoterpenoid metabolic process; GO:0016099,monoterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0016137,glycoside metabolic process; GO:0016138,glycoside biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0046184,aldehyde biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0120254,olefinic compound metabolic process; GO:0120255,olefinic compound biosynthetic process; GO:1900992,(-)-secologanin metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901657,glycosyl compound metabolic process; GO:1901659,glycosyl compound biosynthetic process; GO:1901804,beta-glucoside metabolic process; GO:1901806,beta-glucoside biosynthetic process","PF00201.21:UDP-glucoronosyl and UDP-glucosyl transferase","--","--","--"]
["novel.806",0.5296,0.9961,0.946,2.8955,2.8784,2.2853,1.6566,1.3054,1.3188,2.528,0.8507,1.3081,2.9524,1.4381,2.1952,8,15,14,32,38,29,19,14,18,31,11,20,35,17,26,"NA","NA","NA","NA",1.713798117,0.000749865,0.001811907,"up",1.926081345,"2.92899E-05","9.09254E-05","up","NA","NA","NA","NA",-0.030755876,0.95654897,0.974585753,false,-0.620051526,0.18726603,0.364251975,false,-0.852512847,0.040584861,0.373304912,false,0.824726617,0.109392257,0.245188433,false,0.239709897,0.569820678,0.80280012,false,"chr_0010",25746891,25781665,"+","--","--","K13691 pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 74F2-like (A)","--","hypothetical protein DVH24_032599 [Malus domestica]","UGT2_GARJA RecName: Full=7-deoxyloganetin glucosyltransferase; EC=2.4.1.324; AltName: Full=Genipin glucosyltransferase; AltName: Full=UDP-glucose glucosyltransferase 2; Short=GjUGT2; AltName: Full=UDP-glycosyltransferase 85A24;","A0A498J8P7_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH90242.1};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0035251,UDP-glucosyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0046527,glucosyltransferase activity","--","--","--","--"]
["novel.807",0.2402,0.0803,0,3.6123,6.8725,2.288,5.0629,7.8958,3.7227,6.4125,4.7713,5.3012,4.3881,2.3537,5.6176,3,1,0,33,75,24,48,70,42,65,51,67,43,23,55,5.864540625,"4.08521E-13","4.97823E-12","up",5.549737227,"1.57043E-10","9.96901E-10","up",5.542138319,"2.97364E-09","1.68454E-08","up",5.979033914,"2.46117E-12","1.80611E-11","up",0.124294335,0.743841396,0.835226448,false,0.441799089,0.315080085,0.511549879,false,0.429310368,0.403902981,0.808589852,false,-0.30052522,0.523641708,0.701326594,false,0.021944482,0.966575666,0.989687548,false,"chr_0010",25781133,25781666,"-","--","--","K13691 pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 74F2-like (A)","--","7-deoxyloganetin glucosyltransferase-like [Malus domestica]","UGT2_GARJA RecName: Full=7-deoxyloganetin glucosyltransferase; EC=2.4.1.324; AltName: Full=Genipin glucosyltransferase; AltName: Full=UDP-glucose glucosyltransferase 2; Short=GjUGT2; AltName: Full=UDP-glycosyltransferase 85A24;","A0A540N6L2_MALBA RecName: Full=Glycosyltransferase {ECO:0000256|RuleBase:RU362057}; EC=2.4.1.- {ECO:0000256|RuleBase:RU362057};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0035251,UDP-glucosyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0046527,glucosyltransferase activity","--","--","--","--"]
["novel.81",1.9141,1.7533,1.2035,1.4978,4.1901,1.7833,2.576,7.307,2.5638,6.1003,1.7663,1.2608,1.4847,1.6484,1.4507,138,126,85,79,264,108,141,374,167,357,109,92,84,93,82,1.119937451,0.038775836,0.070977746,false,0.199989078,0.448176576,0.529363439,false,0.848358987,0.053313621,0.08454451,false,1.64465107,0.00015391,0.00041195,"up",0.540353877,0.52586247,0.666413085,false,1.457667337,0.000460495,0.003484629,"up",0.78996875,0.138026742,0.590660014,false,-0.248715068,0.68820796,0.820433368,false,0.678926162,0.105666336,0.334933589,false,"chr_001",5139794,5143122,"+","--","--","K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) systemin receptor SR160 (A)","ko04075: Plant hormone signal transduction","probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Malus domestica]","Y3471_ARATH RecName: Full=Putative receptor-like protein kinase At3g47110; EC=2.7.11.1; Flags: Precursor;","A0A498HPJ4_MALDO RecName: Full=Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0006468,protein phosphorylation; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00069.28:Protein kinase domain","--","--","--"]
["novel.810",3.4535,3.1159,3.7029,11.4077,10.4719,12.0329,9.7222,6.2449,8.0912,9.4244,9.3157,10.8146,10.9269,13.9772,11.4103,437,393,459,1056,1158,1279,934,561,925,968,1009,1385,1085,1384,1132,1.713245875,"1.41649E-33","8.64852E-32","up",2.113963955,"7.9046E-44","4.60717E-42","up",1.936775489,"2.975E-47","2.42776E-45","up",1.512514894,"6.728E-14","5.73355E-13","up",-0.188136319,0.346371071,0.498860044,false,-0.587423316,0.004102822,0.020928553,false,-0.42764461,0.029692492,0.327389111,false,0.24130169,0.06733604,0.172791969,false,-0.152112557,0.311479691,0.603250994,false,"chr_0010",25814668,25829707,"+","--","--","no KO assigned | (RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g50270-like (A)","--","hypothetical protein DVH24_032593 [Malus domestica]","PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22150, chloroplastic; Flags: Precursor;","A0A498J4W4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH90236.1};","FOG: PPR repeat","GO:0009507,chloroplast; GO:0043231,intracellular membrane-bounded organelle; GO:0005739,mitochondrion; GO:0009536,plastid; GO:0003729,mRNA binding; GO:0003723,RNA binding; GO:1900865,chloroplast RNA modification; GO:0080156,mitochondrial mRNA modification; GO:0009451,RNA modification; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016070,RNA metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0000959,mitochondrial RNA metabolic process; GO:0016071,mRNA metabolic process; GO:0016556,mRNA modification; GO:1900864,mitochondrial RNA modification; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0110165,cellular anatomical entity","PF13041.9:PPR repeat family","--","--","--"]
["novel.811",0.1053,0.1057,0,5.0391,2.6515,3.1347,0.2775,1.7803,1.399,2.0761,1.8457,0.7285,1.0738,1.346,0.9404,1,1,0,35,22,25,2,12,12,16,15,7,8,10,7,"NA","NA","NA","NA","NA","NA","NA","NA",5.880354427,"3.00052E-07","1.27395E-06","up","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",-1.575223851,0.014500682,0.244165374,false,1.266838217,0.026058551,0.084433433,false,1.627000242,0.002325599,0.0252096,"up","chr_0010",25817990,25826538,"-","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["novel.812",10.6327,8.921,7.5359,14.0186,27.5978,9.0879,28.176,30.2499,16.8294,11.4199,8.9429,12.4122,16.0888,8.6834,14.5783,507,424,352,489,1150,364,1020,1024,725,442,365,599,602,324,545,0.463279483,0.035183056,0.065336172,false,0.831150572,0.001578384,0.003565911,false,1.13979051,0.004367917,0.009003653,"up",1.765036227,"1.89269E-10","1.14122E-09","up",1.314351367,"2.62084E-06","2.2397E-05","up",0.947261465,0.002037203,0.011923759,false,0.615829743,0.150627027,0.604524944,false,0.699568954,0.082535415,0.200972628,false,0.338750921,0.418942712,0.697769582,false,"chr_0010",25831420,25854429,"+","--","--","K22845 phlorizin synthase [EC:2.4.1.357] | (RefSeq) phloretin 2'-O-glucosyltransferase (A)","ko00941: Flavonoid biosynthesis; ko01110: Biosynthesis of secondary metabolites","putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 [Malus sylvestris]","UFOG3_FRAAN RecName: Full=Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 {ECO:0000250|UniProtKB:Q2V6K0}; Short=FaGT3 {ECO:0000303|PubMed:16443693}; EC=2.4.1.- {ECO:0000250|UniProtKB:Q2V6K0}; AltName: Full=Flavonol 3-O-glucosyltransferase 3 {ECO:0000250|UniProtKB:Q2V6K0};","A0A540N6K7_MALBA RecName: Full=Glycosyltransferase {ECO:0000256|RuleBase:RU362057}; EC=2.4.1.- {ECO:0000256|RuleBase:RU362057};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0008194,UDP-glycosyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity","PF00201.21:UDP-glucoronosyl and UDP-glucosyl transferase","--","--","--"]
["novel.813",6.0598,4.2671,2.6145,3.4385,7.0912,2.3412,6.5662,8.3426,3.8979,3.1834,2.4578,4.0444,3.6718,1.1981,3.0917,265,186,112,110,271,86,218,259,154,113,92,179,126,41,106,-0.233524087,0.508957712,0.606117891,false,-0.410742137,0.341333599,0.421751537,false,0.223646567,0.635863833,0.701319711,false,0.825901371,0.031877195,0.053886388,false,1.072254252,0.002035328,0.008006583,"up",1.25080133,0.003355573,0.017801873,"up",0.59388048,0.202647378,0.660622306,false,0.48129351,0.279012128,0.46584621,false,0.66444999,0.194505762,0.470742962,false,"chr_0010",25831420,25854429,"-","--","--","K22845 phlorizin synthase [EC:2.4.1.357] | (RefSeq) phloretin 2'-O-glucosyltransferase (A)","ko00941: Flavonoid biosynthesis; ko01110: Biosynthesis of secondary metabolites","putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 [Malus sylvestris]","UFOG3_FRAAN RecName: Full=Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 {ECO:0000250|UniProtKB:Q2V6K0}; Short=FaGT3 {ECO:0000303|PubMed:16443693}; EC=2.4.1.- {ECO:0000250|UniProtKB:Q2V6K0}; AltName: Full=Flavonol 3-O-glucosyltransferase 3 {ECO:0000250|UniProtKB:Q2V6K0};","A0A540N6K7_MALBA RecName: Full=Glycosyltransferase {ECO:0000256|RuleBase:RU362057}; EC=2.4.1.- {ECO:0000256|RuleBase:RU362057};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0008194,UDP-glycosyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity","PF00201.21:UDP-glucoronosyl and UDP-glucosyl transferase","--","--","--"]
["novel.816",191.7084,121.562,142.1101,332.7166,184.6561,233.6524,294.6137,348.653,340.6461,240.7189,165.3348,136.0676,180.2662,166.4125,140.9319,3071,1941,2230,3899,2585,3144,3583,3965,4930,3130,2267,2206,2266,2086,1770,0.44752775,0.102137021,0.162489965,false,0.390840446,0.059469688,0.092889961,false,0.932800332,0.000584771,0.00143784,false,1.392573013,"9.05902E-12","6.26466E-11","up",0.959040307,0.000115588,0.000653933,false,1.016877685,"3.00361E-10","1.19941E-08","up",0.460932838,0.049995017,0.401915065,false,0.501694048,0.094625509,0.221957884,false,0.56525691,0.018044225,0.108683706,false,"chr_0010",26204067,26205097,"-","--","--","--","--","hypothetical protein DVH24_032565 [Malus domestica]","CSTM9_ARATH RecName: Full=Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 9 {ECO:0000303|PubMed:29272523}; Short=AthCYSTM9 {ECO:0000303|PubMed:29272523};","A0A498J3N9_MALDO RecName: Full=CYSTM domain-containing protein {ECO:0000259|Pfam:PF12734};","--","GO:0005737,cytoplasm; GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0005886,plasma membrane; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0071944,cell periphery","PF12734.10:Cysteine-rich TM module stress tolerance","--","--","--"]
["novel.818",0.8312,0.6177,1.4142,0.3367,0.3875,0.5498,0.2433,0.2602,0.2385,0.3413,0.5035,0.6996,0.3531,0.4328,0.3534,27,20,45,8,11,15,6,6,7,9,14,23,9,11,9,-0.691124593,0.180291299,0.261153286,false,-1.030444121,0.051785279,0.082138427,false,-0.947359156,0.077059767,0.11670237,false,-1.660416781,0.004976086,0.010118143,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",26163343,26165206,"-","--","--","--","--","uncharacterized protein LOC126581993 isoform X1 [Malus sylvestris]","--","A0A5N5GHS4_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2613381.1};","--","GO:0046983,protein dimerization activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding","PF05699.17:hAT family C-terminal dimerisation region","--","--","--"]
["novel.82",0.1621,0.2846,0.1241,2.6041,0.7885,0.7721,0.961,0.5709,1.3459,0.4993,0.4262,0.3604,0.7748,0.259,0.4653,4,7,3,47,17,16,18,10,30,10,9,9,15,5,9,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA",2.610655997,0.000108841,0.000299097,"up",1.278062668,0.026300128,0.068338952,false,0.942502757,0.12748548,0.279881451,false,-0.460439933,0.462854477,0.836336104,false,"NA","NA","NA","NA","NA","NA","NA","NA","chr_001",5175821,5176875,".","--","--","K13260 isoflavone/4'-methoxyisoflavone 2'-hydroxylase [EC:1.14.14.90 1.14.14.89] | (RefSeq) cytochrome P450 81E8-like (A)","ko00943: Isoflavonoid biosynthesis; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites","PREDICTED: cytochrome P450 [Prunus dulcis]","C81E8_MEDTR RecName: Full=Cytochrome P450 81E8 {ECO:0000303|PubMed:14617078}; EC=1.14.13.- {ECO:0000305};","A0A5E4E8J8_PRUDU SubName: Full=PREDICTED: cytochrome P450 {ECO:0000313|EMBL:VVA12005.1};","Cytochrome P450 CYP2 subfamily","GO:0016021,integral component of membrane; GO:0020037,heme binding; GO:0005506,iron ion binding; GO:0004497,monooxygenase activity; GO:0016705,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding; GO:0046914,transition metal ion binding; GO:0003824,catalytic activity; GO:0016491,oxidoreductase activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF00067.25:Cytochrome P450","--","--","--"]
["novel.821",1.3881,1.2908,2.3503,1.157,1.1623,1.048,1.5163,0.4769,0.712,1.5016,2.0569,2.877,2.1142,3.0287,1.5546,41,38,68,25,30,26,34,10,19,36,52,86,49,70,36,0.548372467,0.146310644,0.219640632,false,0.711754805,0.059940023,0.093516717,false,-0.356183503,0.362911195,0.442934516,false,-0.600216428,0.238026862,0.311231494,false,-1.136268409,0.023263289,0.061810587,false,-1.300785405,0.008276963,0.036771293,"down",-0.25227865,0.62633356,0.901708018,false,-0.886767762,0.019988549,0.069011789,false,-1.041828806,0.006543597,0.053080311,false,"chr_0010",26383544,26384898,"+","--","--","K13691 pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 74F2-like (A)","--","7-deoxyloganetin glucosyltransferase-like [Malus sylvestris]","UGT6_CATRO RecName: Full=7-deoxyloganetin glucosyltransferase; EC=2.4.1.324; AltName: Full=Iridoid 1-O-glucosyltransferase; AltName: Full=UDP-glucose glucosyltransferase 6; Short=CrUGT6; AltName: Full=UDP-glycosyltransferase 85A23;","A0A540N6G5_MALBA RecName: Full=UDPGT domain-containing protein {ECO:0000259|PROSITE:PS00375};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0035251,UDP-glucosyltransferase activity; GO:1900994,(-)-secologanin biosynthetic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0008194,UDP-glycosyltransferase activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity; GO:0016758,hexosyltransferase activity; GO:0046527,glucosyltransferase activity; GO:0006081,cellular aldehyde metabolic process; GO:0006629,lipid metabolic process; GO:0006720,isoprenoid metabolic process; GO:0006721,terpenoid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0008299,isoprenoid biosynthetic process; GO:0008610,lipid biosynthetic process; GO:0009058,biosynthetic process; GO:0009987,cellular process; GO:0016098,monoterpenoid metabolic process; GO:0016099,monoterpenoid biosynthetic process; GO:0016114,terpenoid biosynthetic process; GO:0016137,glycoside metabolic process; GO:0016138,glycoside biosynthetic process; GO:0018130,heterocycle biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044255,cellular lipid metabolic process; GO:0046184,aldehyde biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0120254,olefinic compound metabolic process; GO:0120255,olefinic compound biosynthetic process; GO:1900992,(-)-secologanin metabolic process; GO:1901135,carbohydrate derivative metabolic process; GO:1901137,carbohydrate derivative biosynthetic process; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1901657,glycosyl compound metabolic process; GO:1901659,glycosyl compound biosynthetic process; GO:1901804,beta-glucoside metabolic process; GO:1901806,beta-glucoside biosynthetic process","PF00201.21:UDP-glucoronosyl and UDP-glucosyl transferase","--","--","--"]
["novel.827",0.1854,0.2789,0.7947,0.7348,1.1454,0.6841,0.6104,0.1567,0.5129,0.7764,0.7363,1.1355,0.3307,0.4737,0.5438,10,15,42,29,54,31,25,6,25,34,34,62,14,20,23,1.275480585,0.020958637,0.041777315,"up",0.402653261,0.501279939,0.580776087,false,1.267846111,0.030677457,0.051823884,false,0.322596551,0.642861068,0.710653864,false,-0.938062463,0.068668524,0.147671898,false,-0.06297098,0.911500709,0.951540269,false,-0.950455484,0.079472269,0.486769906,false,0.010640682,0.978971175,0.989636188,false,0.892755247,0.043314519,0.193482109,false,"chr_0010",26698277,26700962,"-","--","--","--","--","hypothetical protein DVH24_039092 [Malus domestica]","--","A0A498KBE0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI04818.1};","--","--","--","--","--","--"]
["novel.828",11.9735,14.8661,12.6529,28.2059,28.0119,32.7179,23.2016,22.3387,20.8514,38.7621,33.8714,34.7148,28.0365,32.532,39.1782,1507,1865,1560,2597,3081,3459,2217,1996,2371,3960,3649,4422,2769,3204,3866,1.632863121,"5.99385E-26","2.2003E-24","up",1.626150808,"6.77785E-23","1.24346E-21","up",1.382725589,"2.70204E-21","5.09387E-20","up",1.034531843,"3.04687E-11","1.99E-10","up",-0.585331916,"8.79684E-05",0.000513845,false,-0.576940994,0.000465813,0.003520053,false,-0.350850454,0.009650975,0.199054062,false,-0.232200976,0.10332191,0.235905971,false,-0.218328209,0.180549082,0.452646478,false,"chr_0010",26755590,26785120,"+","--","--","K25898 CO(2)-response secreted protease | (RefSeq) CO(2)-response secreted protease-like isoform X2 (A)","--","hypothetical protein C1H46_038557 [Malus baccata]","AIR3_ARATH RecName: Full=Subtilisin-like protease SBT5.3; EC=3.4.21.-; AltName: Full=Auxin-induced in root cultures protein 3; AltName: Full=Subtilase subfamily 5 member 3; Short=AtSBT5.3; AltName: Full=Subtilisin-like protease AIR3; Flags: Precursor;","A0A540KNX6_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD75926.1};","--","GO:0005576,extracellular region; GO:0004252,serine-type endopeptidase activity; GO:0010102,lateral root morphogenesis; GO:0006508,proteolysis; GO:0009733,response to auxin; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008236,serine-type peptidase activity; GO:0016787,hydrolase activity; GO:0017171,serine hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009653,anatomical structure morphogenesis; GO:0009791,post-embryonic development; GO:0010015,root morphogenesis; GO:0010101,post-embryonic root morphogenesis; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048364,root development; GO:0048527,lateral root development; GO:0048528,post-embryonic root development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0090696,post-embryonic plant organ development; GO:0090697,post-embryonic plant organ morphogenesis; GO:0090698,post-embryonic plant morphogenesis; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0010033,response to organic substance; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0110165,cellular anatomical entity","PF00082.25:Subtilase family","--","--","--"]
["novel.833",2.541,3.2412,2.2234,1.5383,0.8308,1.4693,1.6735,1.534,1.4063,0.8497,0.933,0.2869,0.6476,0.9742,1.5279,70,89,60,31,20,34,35,30,35,19,22,8,14,21,33,-1.78441028,"9.74045E-05",0.000349533,"down",-1.060190726,0.006363531,0.012658918,"down",-0.861493297,0.018693699,0.033363924,false,-0.516492081,0.112793006,0.163831263,false,1.27907542,0.011988484,0.035681567,"up",0.56074101,0.190585887,0.368514924,false,0.345792623,0.374840337,0.793535786,false,0.932396912,0.098274311,0.227851375,false,0.223354441,0.637622809,0.840720627,false,"chr_0010",27100469,27101646,".","--","--","--","--","hypothetical protein DVH24_032495 [Malus domestica]","--","A0A498J3G8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH90138.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.838",1.5869,1.1372,2.4878,2.8084,2.5779,3.6434,1.0824,0.8183,2.9013,1.0997,2.185,2.562,0.8125,1.6658,0.7952,112,80,172,145,159,216,58,41,185,63,132,183,45,92,44,0.349918678,0.354169957,0.45370541,false,-0.374940358,0.336156752,0.41635163,false,1.007774125,0.00124495,0.002867024,"up",0.152982955,0.743800409,0.797005553,false,-0.180914884,0.711496313,0.812689061,false,0.546811756,0.270225196,0.463202543,false,-0.850784021,0.050475656,0.403821876,false,0.672704504,0.036089302,0.107895421,false,1.407311153,"2.32702E-05",0.000674205,"up","chr_0010",27407786,27410803,".","--","--","--","--","uncharacterized protein LOC104648678 [Solanum lycopersicum]","RRPO_OENBE RecName: Full=RNA-directed DNA polymerase homolog; EC=2.7.7.48; AltName: Full=Reverse transcriptase homolog;","A0A8I7B4B4_HORVV RecName: Full=Reverse transcriptase domain-containing protein {ECO:0000259|PROSITE:PS50878};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0005739,mitochondrion; GO:0003968,RNA-directed 5'-3' RNA polymerase activity; GO:0003964,RNA-directed DNA polymerase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034062,5'-3' RNA polymerase activity; GO:0097747,RNA polymerase activity; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0034061,DNA polymerase activity; GO:0140097,catalytic activity, acting on DNA; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00078.30:Reverse transcriptase (RNA-dependent DNA polymerase)","--","--","--"]
["novel.840",10.4225,15.0494,15.1144,3.5951,2.7866,4.1746,1.6038,1.3035,1.779,11.9403,18.0372,16.1209,11.4201,15.9334,9.6286,214,308,304,54,50,72,25,19,33,199,317,335,184,256,155,0.366773672,0.098510354,0.157619767,false,0.160213236,0.51869319,0.597435687,false,-1.733242186,"3.03554E-11","2.20046E-10","down",-2.825118698,"9.52871E-23","1.54149E-21","down",-3.17896693,"5.47798E-30","6.88528E-28","down",-2.970172687,"1.08137E-21","2.36954E-19","down",-1.093626733,0.001246868,0.065629951,false,-2.084187737,"1.20615E-16","1.25417E-14","down",-1.868341933,"3.59059E-11","6.67946E-09","down","chr_0010",27467283,27468684,"-","--","--","K20179 vacuolar protein sorting-associated protein 11 | (RefSeq) vacuolar protein-sorting-associated protein 11 homolog (A)","--","hypothetical protein C1H46_031381 [Malus baccata]","VPS11_ARATH RecName: Full=Vacuolar protein-sorting-associated protein 11 homolog; Short=AtVPS11;","A0A540L9A5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD83068.1};","Vacuolar assembly/sorting protein PEP5/VPS11","GO:0033263,CORVET complex; GO:0005768,endosome; GO:0030897,HOPS complex; GO:0005739,mitochondrion; GO:0009705,plant-type vacuole membrane; GO:0032991,protein-containing complex; GO:0046872,metal ion binding; GO:0030674,protein-macromolecule adaptor activity; GO:0007032,endosome organization; GO:0006886,intracellular protein transport; GO:0048284,organelle fusion; GO:0007033,vacuole organization; GO:0006904,vesicle docking involved in exocytosis; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0060090,molecular adaptor activity; GO:0006996,organelle organization; GO:0008150,biological_process; GO:0009987,cellular process; GO:0010256,endomembrane system organization; GO:0016043,cellular component organization; GO:0016050,vesicle organization; GO:0071840,cellular component organization or biogenesis; GO:0006810,transport; GO:0008104,protein localization; GO:0015031,protein transport; GO:0033036,macromolecule localization; GO:0045184,establishment of protein localization; GO:0046907,intracellular transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051641,cellular localization; GO:0051649,establishment of localization in cell; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0006887,exocytosis; GO:0016192,vesicle-mediated transport; GO:0022406,membrane docking; GO:0032940,secretion by cell; GO:0046903,secretion; GO:0048278,vesicle docking; GO:0051640,organelle localization; GO:0140029,exocytic process; GO:0140056,organelle localization by membrane tethering; GO:0140352,export from cell; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0097708,intracellular vesicle; GO:0099023,vesicle tethering complex; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0098796,membrane protein complex; GO:0000325,plant-type vacuole; GO:0005773,vacuole; GO:0005774,vacuolar membrane; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle","--","--","--","--"]
["novel.842",4.8279,5.8815,7.1112,0.8485,1.8152,2.3811,0.4542,2.2345,2.6719,2.9739,3.7871,1.2267,1.67,1.4984,2.6391,70,85,101,9,23,29,5,23,35,35,47,18,19,17,30,-0.979021185,0.019639947,0.039519274,false,-1.323140661,0.000160629,0.000438981,"down",-1.596012684,"8.76995E-05",0.000251006,"down",-1.451247203,0.004064035,0.008402018,"down",-0.468428669,0.485812235,0.631865352,false,-0.110316857,0.858417962,0.923409534,false,0.151757189,0.824584827,0.958298715,false,-0.614109418,0.292884671,0.481447517,false,-0.250448709,0.630479158,0.838443389,false,"chr_0010",27516609,27517228,".","--","--","--","--","hypothetical protein DVH24_032457 [Malus domestica]","--","A0A498J3M8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH90100.1};","--","--","--","--","--","--"]
["novel.846",0.5753,1.2986,1.566,0.0655,0,0.3995,0,0,0.0531,0.2362,0.392,0.1895,0.1222,0.3063,0,12,27,32,1,0,7,0,0,1,4,7,4,2,5,0,-1.895180889,0.005206713,0.012341668,"down",-2.706162093,0.00197834,0.004383334,"down",-2.690256832,0.005503479,0.011109904,"down",-5.424084402,"6.6995E-05",0.000191295,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",27974614,27975505,".","--","--","--","--","hypothetical protein DVH24_032403 [Malus domestica]","--","A0A498J4B5_MALDO RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};","--","GO:0003676,nucleic acid binding; GO:0004523,RNA-DNA hybrid ribonuclease activity; GO:0003674,molecular_function; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0004518,nuclease activity; GO:0004519,endonuclease activity; GO:0004521,endoribonuclease activity; GO:0004540,ribonuclease activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0016891,endoribonuclease activity, producing 5'-phosphomonoesters; GO:0016893,endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid","PF13456.9:Reverse transcriptase-like","--","--","--"]
["novel.849",2.2222,3.8562,6.3762,0.2463,0.8247,0.3575,0.1582,0.6768,0.2659,1.4798,1.4735,1.5429,0.9184,1.3815,0.766,37,64,104,3,12,5,2,8,4,20,21,26,12,18,10,-1.273751558,0.004454828,0.010754402,"down",-1.720825785,0.000475845,0.001193026,"down",-2.868549078,"3.56428E-06","1.29423E-05","down",-3.230233709,"4.95208E-07","1.95157E-06","down",-1.944196559,0.00360279,0.013060342,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.575254844,0.013112611,0.049730569,"down","NA","NA","NA","NA","chr_0010",28370834,28371545,".","--","--","--","--","hypothetical protein C1H46_035131 [Malus baccata]","CLE20_ARATH RecName: Full=CLAVATA3/ESR (CLE)-related protein 20 {ECO:0000303|PubMed:16489133}; Contains: RecName: Full=CLE20p {ECO:0000303|PubMed:16489133}; Flags: Precursor;","A0A540KYI9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD79294.1};","--","GO:0048046,apoplast; GO:0005615,extracellular space; GO:0033612,receptor serine/threonine kinase binding; GO:0045168,cell-cell signaling involved in cell fate commitment; GO:0010078,maintenance of root meristem identity; GO:0010088,phloem development; GO:0045595,regulation of cell differentiation; GO:0003674,molecular_function; GO:0005102,signaling receptor binding; GO:0005488,binding; GO:0005515,protein binding; GO:0007154,cell communication; GO:0007267,cell-cell signaling; GO:0008150,biological_process; GO:0009987,cellular process; GO:0023052,signaling; GO:0030154,cell differentiation; GO:0032502,developmental process; GO:0045165,cell fate commitment; GO:0048869,cellular developmental process; GO:0007275,multicellular organism development; GO:0009653,anatomical structure morphogenesis; GO:0009888,tissue development; GO:0010015,root morphogenesis; GO:0010073,meristem maintenance; GO:0010074,maintenance of meristem identity; GO:0019827,stem cell population maintenance; GO:0022622,root system development; GO:0032501,multicellular organismal process; GO:0048364,root development; GO:0048507,meristem development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0098727,maintenance of cell number; GO:0099402,plant organ development; GO:1905392,plant organ morphogenesis; GO:0010087,phloem or xylem histogenesis; GO:0050789,regulation of biological process; GO:0050793,regulation of developmental process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.85",5.184,4.1353,3.6399,12.9283,10.7934,11.2291,12.7904,18.3444,23.2317,6.5735,6.5291,4.8723,8.572,6.6248,6.7411,205,163,141,374,373,373,384,515,830,211,221,195,266,205,209,0.655787952,0.005808966,0.013601201,false,1.051355185,"3.47495E-06","1.2514E-05","up",1.642975797,"1.71926E-14","1.7604E-13","up",2.341302324,"5.25004E-20","7.14823E-19","up",1.699746404,"5.44159E-11","1.06898E-09","up",1.308096507,"1.38547E-07","3.13748E-06","up",0.699784274,0.004120744,0.127106974,false,1.004208093,"1.96136E-06","2.99017E-05","up",0.616845721,0.001854544,0.02126779,false,"chr_001",5424231,5426402,"-","--","--","K13425 WRKY transcription factor 22 | (RefSeq) WRKY transcription factor 22-like (A)","ko04016: MAPK signaling pathway - plant; ko04626: Plant-pathogen interaction","hypothetical protein DVH24_012487 [Malus domestica]","WRKY7_ARATH RecName: Full=Probable WRKY transcription factor 7; AltName: Full=WRKY DNA-binding protein 7;","A0A498HV75_MALDO RecName: Full=WRKY domain-containing protein {ECO:0000259|PROSITE:PS50811};","--","GO:0005634,nucleus; GO:0005516,calmodulin binding; GO:0003700,DNA-binding transcription factor activity; GO:0000976,transcription cis-regulatory region binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0005515,protein binding; GO:0140110,transcription regulator activity; GO:0001067,transcription regulatory region nucleic acid binding; GO:0003676,nucleic acid binding; GO:0003677,DNA binding; GO:0003690,double-stranded DNA binding; GO:0043565,sequence-specific DNA binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:1990837,sequence-specific double-stranded DNA binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF03106.18:WRKY DNA -binding domain","WRKY","TF","WRKY"]
["novel.851",8.9762,5.003,10.8177,6.9872,6.705,9.3503,2.299,4.3902,4.4157,5.8364,10.6324,10.84,2.2242,4.3016,4.9294,72,40,85,41,47,63,14,25,32,38,73,88,14,27,31,0.323806577,0.391795677,0.49127823,false,-0.822851035,0.055525,0.087450246,false,0.108021115,0.768267015,0.815117237,false,-0.873190781,0.043334386,0.070726244,false,-1.18419352,0.004113677,0.014605309,"down",-0.034846878,0.942424421,0.969686224,false,-0.980662227,0.011433811,0.215641577,false,-0.200807596,0.556732991,0.727154662,false,0.954586891,0.015338576,0.096780027,false,"chr_0010",28460611,28460980,"-","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["novel.852",0.1315,0.033,0.0839,0.4832,1.5238,0.3719,1.2343,1.8411,0.7279,0.7798,0.0576,0.2518,0.44,0.3257,0.5242,16,4,10,43,162,38,114,159,80,77,6,31,42,31,50,2.355842838,0.006506529,0.015026137,"up",2.667148875,"1.29611E-07","5.72329E-07","up",3.504059136,"2.74007E-07","1.17213E-06","up",4.230835123,"2.47529E-16","2.5884E-15","up",1.894445746,0.008456518,0.026799338,"up",1.573838029,"7.72315E-05",0.000775481,"up",0.715740391,0.215287198,0.673178339,false,1.17625183,0.153515441,0.311163359,false,0.868251019,0.120034087,0.359453849,false,"chr_0010",28571211,28576724,"-","--","--","K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1-like (A)","ko04626: Plant-pathogen interaction","hypothetical protein VITISV_010143 [Vitis vinifera]","POLR1_ARATH RecName: Full=Retrovirus-related Pol polyprotein from transposon RE1; AltName: Full=Retro element 1 {ECO:0000303|PubMed:10689195}; Short=AtRE1 {ECO:0000303|PubMed:10689195}; Includes: RecName: Full=Protease RE1; EC=3.4.23.-; Includes: RecName: Full=Reverse transcriptase RE1; EC=2.7.7.49; Includes: RecName: Full=Endonuclease RE1;","A5ARV9_VITVI RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0004190,aspartic-type endopeptidase activity; GO:0004519,endonuclease activity; GO:0046872,metal ion binding; GO:0003676,nucleic acid binding; GO:0003964,RNA-directed DNA polymerase activity; GO:0015074,DNA integration; GO:0006310,DNA recombination; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0004518,nuclease activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034061,DNA polymerase activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0019538,protein metabolic process; GO:1901564,organonitrogen compound metabolic process","PF07727.17:Reverse transcriptase (RNA-dependent DNA polymerase)","--","--","--"]
["novel.857",0.1734,0.087,0.177,0.8296,2.9017,0.4902,1.77,2.656,1.1515,3.2842,1.1141,2.2914,2.3753,1.0525,2.2392,8,4,8,28,117,19,62,87,48,123,44,107,86,38,81,4.141875568,"1.37428E-13","1.75959E-12","up",3.993625203,"7.24045E-15","7.14777E-14","up",3.524749906,"2.76914E-06","1.02119E-05","up",3.965986368,"6.78687E-14","5.77875E-13","up",-0.160729034,0.73808425,0.831455452,false,-0.01473527,0.972584362,0.986378621,false,0.432162646,0.505903111,0.857127008,false,-0.591639475,0.377379764,0.567739644,false,-0.436421875,0.492875564,0.75241091,false,"chr_0010",28869206,28920455,"+","--","--","K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 40 (A)","--","hypothetical protein DVH24_032326 [Malus domestica]","DTX40_ARATH RecName: Full=Protein DETOXIFICATION 40 {ECO:0000303|PubMed:11739388}; Short=AtDTX40 {ECO:0000303|PubMed:11739388}; AltName: Full=Multidrug and toxic compound extrusion protein 40 {ECO:0000305}; Short=MATE protein 40 {ECO:0000305};","A0A498J2I7_MALDO RecName: Full=Protein DETOXIFICATION {ECO:0000256|RuleBase:RU004914}; AltName: Full=Multidrug and toxic compound extrusion protein {ECO:0000256|RuleBase:RU004914};","Uncharacterized membrane protein, predicted efflux pump","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0000325,plant-type vacuole; GO:0005774,vacuolar membrane; GO:0005773,vacuole; GO:0015297,antiporter activity; GO:0022857,transmembrane transporter activity; GO:0042910,xenobiotic transmembrane transporter activity; GO:1990961,xenobiotic detoxification by transmembrane export across the plasma membrane; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0015291,secondary active transmembrane transporter activity; GO:0022804,active transmembrane transporter activity; GO:0006810,transport; GO:0008150,biological_process; GO:0009636,response to toxic substance; GO:0009987,cellular process; GO:0042221,response to chemical; GO:0042908,xenobiotic transport; GO:0046618,xenobiotic export from cell; GO:0050896,response to stimulus; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0098754,detoxification; GO:0140115,export across plasma membrane; GO:0140352,export from cell; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0031090,organelle membrane; GO:0098588,bounding membrane of organelle","PF01554.21:MatE","--","--","--"]
["novel.858",32.9207,36.9973,42.6688,11.7185,7.4878,10.7491,8.2182,6.5736,9.8817,17.3105,19.7935,15.2866,13.8981,15.6225,14.2985,649,727,824,169,129,178,123,92,176,277,334,305,215,241,221,-0.917322707,"6.14579E-08","3.8848E-07",false,-1.067032119,"1.12476E-11","8.06554E-11","down",-1.700720061,"1.05452E-15","1.21602E-14","down",-1.904443089,"2.65133E-22","4.19335E-21","down",-0.975910508,"7.43127E-06","5.69136E-05",false,-0.821397443,"7.60643E-05",0.000766264,false,-0.206105665,0.41879526,0.814665498,false,-0.768603189,0.000802463,0.005225857,false,-0.609454543,0.004595127,0.040927937,false,"chr_0010",28875111,28877058,"-","--","--","K02933 large subunit ribosomal protein L6 | (RefSeq) 50S ribosomal protein L6, chloroplastic-like (A)","ko03010: Ribosome","50S ribosomal protein L6, chloroplastic-like [Malus domestica]","RK6_ARATH RecName: Full=50S ribosomal protein L6, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2394; Flags: Precursor;","A0A5N5GJ88_9ROSA SubName: Full=50S ribosomal protein L6 {ECO:0000313|EMBL:KAB2613622.1};","Mitochondrial/chloroplast ribosomal protein L6","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0005576,extracellular region; GO:0005840,ribosome; GO:0003729,mRNA binding; GO:0019843,rRNA binding; GO:0003735,structural constituent of ribosome; GO:0009793,embryo development ending in seed dormancy; GO:0006412,translation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0008150,biological_process; GO:0009790,embryo development; GO:0009791,post-embryonic development; GO:0010154,fruit development; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048316,seed development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle","PF00347.26:Ribosomal protein L6","--","--","--"]
["novel.859",4.1527,5.0691,5.3417,0.949,1.3094,1.1173,0.6774,1.2496,0.7827,3.8173,3.3345,2.6042,1.5893,2.4317,2.3778,323,393,407,54,89,73,40,69,55,241,222,205,97,148,145,-0.38769724,0.072243865,0.120922031,false,-0.89543482,"2.62325E-05","8.22449E-05",false,-1.885655374,"1.2227E-16","1.52382E-15","down",-2.144990108,"4.22517E-15","4.0006E-14","down",-1.744216548,"3.68478E-08","4.55086E-07","down",-1.232426933,0.000124437,0.001168891,"down",-0.257629606,0.464394069,0.837987885,false,-1.482038641,"7.71481E-08","1.67816E-06","down",-0.964441812,0.000587156,0.008903059,false,"chr_0010",28905091,28947359,"+","--","--","K05387 glutamate receptor, ionotropic, plant | (RefSeq) glutamate receptor 3.4 (A)","--","glutamate receptor 3.4 [Malus domestica]","GLR34_ARATH RecName: Full=Glutamate receptor 3.4 {ECO:0000303|PubMed:11379626}; Short=AtGLR3.4 {ECO:0000303|PubMed:11379626}; AltName: Full=Glutamate receptor-like protein 3.4 {ECO:0000303|PubMed:12082126}; AltName: Full=Ligand-gated ion channel 3.4 {ECO:0000305}; Flags: Precursor;","A0A540LQR4_MALBA RecName: Full=Glutamate receptor {ECO:0000256|PIRNR:PIRNR037090};","Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits","GO:0009507,chloroplast; GO:0031969,chloroplast membrane; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0009536,plastid; GO:0005262,calcium channel activity; GO:0008066,glutamate receptor activity; GO:0015276,ligand-gated ion channel activity; GO:0038023,signaling receptor activity; GO:0006816,calcium ion transport; GO:0019722,calcium-mediated signaling; GO:0071311,cellular response to acetate; GO:0071230,cellular response to amino acid stimulus; GO:0070417,cellular response to cold; GO:0071260,cellular response to mechanical stimulus; GO:0009611,response to wounding; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005216,ion channel activity; GO:0005261,cation channel activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015085,calcium ion transmembrane transporter activity; GO:0015267,channel activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022803,passive transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0046873,metal ion transmembrane transporter activity; GO:0004888,transmembrane signaling receptor activity; GO:0060089,molecular transducer activity; GO:0022834,ligand-gated channel activity; GO:0022836,gated channel activity; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0008150,biological_process; GO:0030001,metal ion transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009987,cellular process; GO:0019932,second-messenger-mediated signaling; GO:0023052,signaling; GO:0035556,intracellular signal transduction; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0010033,response to organic substance; GO:0010034,response to acetate; GO:0042221,response to chemical; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0001101,response to acid chemical; GO:0009719,response to endogenous stimulus; GO:0010243,response to organonitrogen compound; GO:0043200,response to amino acid; GO:0071229,cellular response to acid chemical; GO:0071417,cellular response to organonitrogen compound; GO:0071495,cellular response to endogenous stimulus; GO:1901698,response to nitrogen compound; GO:1901699,cellular response to nitrogen compound; GO:0006950,response to stress; GO:0009266,response to temperature stimulus; GO:0009409,response to cold; GO:0009628,response to abiotic stimulus; GO:0033554,cellular response to stress; GO:0009605,response to external stimulus; GO:0009612,response to mechanical stimulus; GO:0071214,cellular response to abiotic stimulus; GO:0071496,cellular response to external stimulus; GO:0104004,cellular response to environmental stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0009941,chloroplast envelope; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0042170,plastid membrane; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery","PF01094.31:Receptor family ligand binding region","--","--","--"]
["novel.86",188.9633,186.7989,229.644,368.0993,280.7076,291.7184,372.465,316.8729,342.4708,316.6382,297.711,298.2314,348.9124,294.9026,291.2012,8458,8334,10069,12053,10980,10968,12657,10069,13849,11504,11406,13510,12255,10329,10219,0.783311836,"3.13432E-09","2.39706E-08",false,0.924017118,"2.37879E-10","1.48107E-09",false,0.853476836,"6.76517E-07","2.72852E-06",false,1.055860868,"6.88515E-14","5.85908E-13","up",0.284793029,0.031675693,0.079556122,false,0.146597926,0.328498517,0.525161148,false,0.20009126,0.239064381,0.69434075,false,0.08727507,0.599909016,0.758658941,false,-0.0453179,0.797331098,0.921849645,false,"chr_001",5433034,5436180,"-","--","--","K25900 cysteine proteinase RD21 [EC:3.4.22.-] | (RefSeq) low-temperature-induced cysteine proteinase-like (A)","--","hypothetical protein DVH24_012486 [Malus domestica]","RD21B_ARATH RecName: Full=Probable cysteine protease RD21B {ECO:0000305}; EC=3.4.22.- {ECO:0000305}; Flags: Precursor;","A0A498HS58_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH72802.1};","Cysteine proteinase Cathepsin L","GO:0005783,endoplasmic reticulum; GO:0005615,extracellular space; GO:0005764,lysosome; GO:0099503,secretory vesicle; GO:0005773,vacuole; GO:0004197,cysteine-type endopeptidase activity; GO:0051603,proteolysis involved in protein catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0008234,cysteine-type peptidase activity; GO:0016787,hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006508,proteolysis; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009057,macromolecule catabolic process; GO:0019538,protein metabolic process; GO:0030163,protein catabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0005576,extracellular region; GO:0000323,lytic vacuole; GO:0031410,cytoplasmic vesicle; GO:0031982,vesicle; GO:0097708,intracellular vesicle","PF00112.26:Papain family cysteine protease","--","--","--"]
["novel.862",2.3045,2.0551,2.6139,0.2333,0.1953,0.1016,0.3373,0,0.6613,0.6309,0.0997,0.5903,0.6526,1.0907,0.4355,27,24,30,2,2,1,3,0,7,6,1,7,6,10,4,-2.194849244,0.00069598,0.002047883,"down",-1.385023671,0.013386524,0.024709271,"down",-3.51271909,"1.6964E-05","5.48989E-05","down",-2.470222466,0.000857919,0.002017475,"down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",29396549,29397049,".","--","--","--","--","hypothetical protein DVH24_032495 [Malus domestica]","--","A0A498J3G8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH90138.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.865",1.2746,1.0549,1.4638,1.176,0.4011,0.9104,0.4617,0.7181,0.7407,0.3926,0.2606,0.3463,0.203,0.2443,0.4877,40,33,45,27,11,24,11,16,21,10,7,11,5,6,12,-1.734011658,0.00018601,0.000628564,"down",-1.728758254,0.000708901,0.001722367,"down",-0.410709277,0.37935077,0.459832811,false,-0.697205249,0.096726898,0.143536773,false,"NA","NA","NA","NA","NA","NA","NA","NA",-0.285905782,0.600637406,0.891451944,false,1.339634724,0.028180476,0.089616468,false,1.343412503,0.037832662,0.177586068,false,"chr_0010",29508395,29509736,".","--","--","--","--","hypothetical protein C1H46_037306 [Malus baccata]","--","A0A540KSH4_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD77170.1};","--","--","--","--","--","--"]
["novel.871",0.3099,0.2487,1.202,1.5249,2.4821,1.7707,1.2244,1.8332,1.6463,1.1452,2.8237,2.2656,2.4483,2.5343,3.399,5,4,19,18,35,24,15,21,24,15,39,37,31,32,43,2.013555696,0.002778246,0.007047812,"up",2.556837016,"9.66791E-06","3.25389E-05","up",1.95415889,0.003685307,0.007726512,"up",1.71699212,0.010612135,0.020078289,"up",-0.291794253,0.53898183,0.677357778,false,-0.827725212,0.037438954,0.11661956,false,-0.244876889,0.588642179,0.887472833,false,-0.045181184,0.925086409,0.961673853,false,-0.57425453,0.150301738,0.408641502,false,"chr_0010",29790575,29794011,"+","--","--","--","--","hypothetical protein C1H46_036037 [Malus baccata]","--","A0A540KWL5_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD78402.1};","--","--","PF12609.11:Wound-induced protein","--","--","--"]
["novel.873",2.9921,4.3151,8.9723,5.8795,3.7805,4.4525,2.2169,2.3707,2.5528,5.1453,8.6662,6.5902,4.0513,6.8507,6.0425,48,69,141,69,53,60,27,27,37,67,119,107,51,86,76,0.514593015,0.208426213,0.293785024,false,0.357746153,0.381672613,0.46312809,false,0.016284693,0.970241127,0.977196261,false,-0.894190587,0.042674953,0.069810836,false,-1.399431628,"1.04837E-05","7.72301E-05","down",-1.237452862,0.000186319,0.001642037,"down",-0.909425279,0.006392997,0.162034277,false,-0.486883092,0.11831894,0.259922593,false,-0.319533901,0.316900414,0.608546671,false,"chr_0010",29850300,29850985,".","--","--","--","--","hypothetical protein C1H46_036030 [Malus baccata]","--","A0A540KVX7_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD78395.1};","--","--","PF12609.11:Wound-induced protein","--","--","--"]
["novel.88",4.2075,5.5518,5.6959,18.1925,16.0665,19.655,13.0118,6.7642,13.5413,6.4232,13.0905,12.5172,8.7714,12.0105,8.2833,184,242,244,582,614,722,432,210,535,228,490,554,301,411,284,1.228581633,"7.83755E-06","3.46614E-05","up",1.204733985,"1.5468E-08","7.72666E-08","up",2.015766747,"6.95628E-30","2.38985E-28","up",1.387779928,"7.03357E-07","2.70978E-06","up",0.170994992,0.608694453,0.734632687,false,0.198850128,0.485803526,0.670972414,false,-0.629883288,0.018684782,0.27147079,false,0.802860335,0.002482337,0.013134407,false,0.836339818,"1.70535E-05",0.000521732,false,"chr_001",5910461,5912330,".","--","--","K13448 calcium-binding protein CML | (RefSeq) polcalcin Bet v 4-like (A)","ko04626: Plant-pathogen interaction","hypothetical protein DVH24_012447 [Malus domestica]","POLC4_BETPN RecName: Full=Polcalcin Bet v 4; AltName: Full=Calcium-binding pollen allergen Bet v 4; AltName: Allergen=Bet v 4;","A0A498HV37_MALDO RecName: Full=EF-hand domain-containing protein {ECO:0000259|PROSITE:PS50222};","--","GO:0005509,calcium ion binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0046872,metal ion binding","PF00036.35:EF hand","--","--","--"]
["novel.882",0.647,1.1212,0.5404,1.5277,1.75,1.7506,1.1621,1.9056,2.6042,0.6522,1.5118,0.6974,0.9744,1.4282,0.9003,11,19,9,19,26,25,15,23,40,9,22,12,13,19,12,"NA","NA","NA","NA","NA","NA","NA","NA",1.33614884,0.007747202,0.015163501,"up",1.571729188,0.003209103,0.006776748,"up",1.106553002,0.04431225,0.104226594,false,0.786788813,0.114616826,0.260608837,false,0.23884726,0.594353419,0.889231842,false,0.872756469,0.093664754,0.220286775,false,0.557869876,0.225719837,0.510271019,false,"chr_0010",30018895,30028625,"-","--","--","--","--","hypothetical protein DVH24_032224 [Malus domestica]","--","A0A498J5D4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89867.1};","--","--","--","--","--","--"]
["novel.883",1.9501,1.7075,1.3755,1.0178,1.5418,2.195,0.3269,0.6992,0.6672,1.3542,0.9113,0.8408,0.9941,0.725,1.5829,55,48,38,21,38,52,7,14,17,31,22,24,22,16,35,-0.513894779,0.18256141,0.263795033,false,-0.320418054,0.42999858,0.511498947,false,0.127634911,0.743410799,0.794632673,false,-1.293791993,0.004328235,0.008901832,"down",-0.769203408,0.142435531,0.2586896,false,-0.956045972,0.075767907,0.193428454,false,-1.419311664,0.005072859,0.141875422,false,0.655156614,0.145727433,0.300069973,false,0.471717756,0.309260714,0.601043926,false,"chr_0010",30021988,30033058,"-","--","--","K13416 brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 (A)","ko04016: MAPK signaling pathway - plant; ko04075: Plant hormone signal transduction; ko04626: Plant-pathogen interaction","receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Malus sylvestris]","B120_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase B120; EC=2.7.11.1; Flags: Precursor;","A0A540KWA8_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD78389.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005524,ATP binding; GO:0005516,calmodulin binding; GO:0030246,carbohydrate binding; GO:0106310,protein serine kinase activity; GO:0004674,protein serine/threonine kinase activity; GO:0031625,ubiquitin protein ligase binding; GO:0045087,innate immune response; GO:0006468,protein phosphorylation; GO:0048544,recognition of pollen; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0005515,protein binding; GO:0003824,catalytic activity; GO:0004672,protein kinase activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016773,phosphotransferase activity, alcohol group as acceptor; GO:0140096,catalytic activity, acting on a protein; GO:0019899,enzyme binding; GO:0044389,ubiquitin-like protein ligase binding; GO:0002376,immune system process; GO:0006950,response to stress; GO:0006952,defense response; GO:0006955,immune response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016310,phosphorylation; GO:0019538,protein metabolic process; GO:0036211,protein modification process; GO:0043170,macromolecule metabolic process; GO:0043412,macromolecule modification; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0008037,cell recognition; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF07714.20:Protein tyrosine and serine/threonine kinase","--","--","--"]
["novel.895",0.6256,0.7753,0.8265,1.6097,1.3475,1.1391,1.5996,0.7257,1.0998,1.0427,1.6337,0.909,1.5945,1.599,1.2673,17,21,22,32,32,26,33,14,27,23,38,25,34,34,27,0.865163284,0.044343577,0.07968846,false,1.297247823,0.000848998,0.002028872,"up",1.095377911,0.007786888,0.015230169,"up",0.908071324,0.052262311,0.083524242,false,0.052247595,0.911543854,0.946872854,false,-0.374642415,0.376562789,0.572690796,false,-0.192243345,0.663939279,0.913498045,false,0.245876978,0.56085655,0.730322702,false,-0.17667232,0.635365511,0.840029704,false,"chr_0010",30496870,30498031,".","--","--","--","--","uncharacterized protein LOC126620819 [Malus sylvestris]","--","A0A540NJ29_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE11035.1};","--","--","PF06156.16:Initiation control protein YabA","--","--","--"]
["novel.896",2.5935,2.5385,3.1642,1.0376,1.7372,1.8827,0.4166,0.1782,0.7002,1.7924,3.8429,4.5001,1.6122,3.3952,2.4205,41,40,49,12,24,25,5,2,10,23,52,72,20,42,30,0.473740719,0.22308728,0.310950059,false,0.131070822,0.727134744,0.783559976,false,-0.608455691,0.126739174,0.180520899,false,-2.363179825,"1.86574E-05","5.82311E-05","down",-2.826718316,"4.6451E-06","3.74642E-05","down",-2.48331325,"5.11682E-05",0.000550749,"down",-1.762709091,0.007969015,0.179684024,false,-1.064614673,0.026275792,0.084988642,false,-0.715362043,0.1238586,0.366160981,false,"chr_0010",30553000,30554868,"+","--","--","--","--","hypothetical protein DVH24_032167 [Malus domestica]","--","A0A498J2V3_MALDO RecName: Full=DUF4219 domain-containing protein {ECO:0000259|Pfam:PF13961};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF13961.9:Domain of unknown function (DUF4219)","--","--","--"]
["novel.897",3.0056,3.358,3.6261,19.7024,8.5983,16.5895,17.6351,13.5671,27.5216,5.8909,9.1776,8.7742,7.8345,10.65,8.7998,44,49,52,211,110,204,196,141,364,70,115,130,90,122,101,1.439154706,"1.27913E-07","7.66879E-07","up",1.74172187,"7.81422E-12","5.7018E-11","up",2.373129384,"3.77903E-12","3.00969E-11","up",2.830897294,"1.81006E-21","2.71966E-20","up",1.406408577,"3.87938E-06","3.18767E-05","up",1.106913551,0.000122457,0.001152243,"up",0.459599126,0.196088088,0.653270496,false,0.950302393,0.005065256,0.023262811,false,0.6538731,0.041405383,0.187804683,false,"chr_0010",30602469,30603094,".","--","--","--","--","hypothetical protein DVH24_032176 [Malus domestica]","--","A0A498J251_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89819.1};","--","--","--","--","--","--"]
["novel.9",1.4248,1.576,1.268,0.0499,0.1463,0.3044,0.0481,0.1801,0.2022,0.3151,0.2561,0.3429,0.1862,0.6069,0.3029,78,86,68,2,7,14,2,7,10,14,12,19,8,26,13,-2.033022157,"1.45545E-08","1.00891E-07","down",-1.675764066,"8.7635E-05",0.00025087,"down",-2.866398379,"1.55546E-08","7.95927E-08","down",-3.01983936,"5.81533E-10","3.3264E-09","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_001",486045,491446,"-","--","--","--","--","GDSL esterase/lipase EXL3-like [Malus domestica]","EXL3_ARATH RecName: Full=GDSL esterase/lipase EXL3; EC=3.1.1.-; AltName: Full=Family II extracellular lipase 3; Short=Family II lipase EXL3; Flags: Precursor;","A0A540MGK9_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD97900.1};","--","GO:0005783,endoplasmic reticulum; GO:0005576,extracellular region; GO:0016298,lipase activity; GO:0016042,lipid catabolic process; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0006629,lipid metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF00657.25:GDSL-like Lipase/Acylhydrolase","--","--","--"]
["novel.90",0.4426,0.3757,0.0695,9.9129,19.1287,5.8365,12.8255,20.3817,20.6885,12.0798,6.5629,9.8228,12.6689,8.0926,10.4219,13,11,2,213,491,144,286,425,549,288,165,292,292,186,240,5.191515902,"6.26678E-29","2.93486E-27","up",5.420687929,"3.62589E-40","1.82761E-38","up",5.52446993,"9.33876E-21","1.66765E-19","up",6.193494671,"8.07412E-52","5.65189E-50","up",1.018840929,0.00072914,0.003295983,"up",0.790738208,0.002434068,0.013783088,false,0.662104025,0.124762813,0.570557104,false,0.357729669,0.428316324,0.615969173,false,0.135717965,0.749116751,0.899322657,false,"chr_001",6099690,6101538,"+","--","--","--","--","patatin-like protein 2 [Malus sylvestris]","PLP2_ARATH RecName: Full=Patatin-like protein 2; Short=AtPLP2; EC=3.1.1.-; AltName: Full=Patatin-related phospholipase A IIalpha; Short=pPLAIIa; AltName: Full=Phospholipase A IIA; Short=AtPLAIIA;","A0A540N4R2_MALBA RecName: Full=Patatin {ECO:0000256|RuleBase:RU361262}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361262};","Ca2+-independent phospholipase A2","GO:0005737,cytoplasm; GO:0016020,membrane; GO:0005777,peroxisome; GO:0047372,acylglycerol lipase activity; GO:0042802,identical protein binding; GO:0016298,lipase activity; GO:0004620,phospholipase activity; GO:0071456,cellular response to hypoxia; GO:0051607,defense response to virus; GO:0016042,lipid catabolic process; GO:0006629,lipid metabolic process; GO:0031408,oxylipin biosynthetic process; GO:0009626,plant-type hypersensitive response; GO:0046686,response to cadmium ion; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0052689,carboxylic ester hydrolase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009615,response to virus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0140546,defense response to symbiont; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0006082,organic acid metabolic process; GO:0009058,biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0031407,oxylipin metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0012501,programmed cell death; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0042579,microbody; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01734.25:Patatin-like phospholipase","--","--","--"]
["novel.902",0.6548,0.3942,0.4457,1.2234,1.0741,1.2473,0.5463,0.5842,0.4832,1.0219,0.7395,0.6255,1.2518,1.6179,1.1137,30,18,20,41,43,48,19,19,20,38,29,29,45,58,40,0.860564517,0.046956538,0.083636469,false,1.703560587,"5.25667E-06","1.84161E-05","up",1.455637494,0.000105409,0.000297323,"up",0.388899496,0.393847175,0.476318283,false,-0.45848439,0.286371889,0.435125963,false,-1.302219467,0.000511667,0.003805257,"down",-1.070858631,0.003407884,0.115508151,false,0.61494281,0.092110458,0.217568611,false,-0.223210328,0.475913846,0.740215476,false,"chr_0010",31340928,31342886,".","--","--","--","--","uncharacterized protein LOC103413411 [Malus domestica]","--","A0A6P5S1A3_PRUAV SubName: Full=uncharacterized protein LOC110751541 {ECO:0000313|RefSeq:XP_021807708.1};","FOG: Reverse transcriptase","--","PF14111.9:Domain of unknown function (DUF4283)","--","--","--"]
["novel.906",1.1775,1.2435,0.8857,2.2026,0.9928,2.8036,1.7959,1.3967,4.5273,2.6722,6.2266,2.8168,2.9221,3.8015,3.0828,19,20,14,26,14,38,22,16,66,35,86,46,37,48,39,1.993597312,"1.34437E-05","5.65679E-05","up",1.856916578,"9.93276E-07","3.88897E-06","up",1.052578841,0.040535687,0.066376908,false,1.4926074,0.005387732,0.010864571,"up",-0.488511655,0.365435639,0.518556755,false,-0.34013937,0.469706591,0.6567728,false,0.44422884,0.437503181,0.823638734,false,-0.930162022,0.068809311,0.175671365,false,-0.780869069,0.067226142,0.255186826,false,"chr_0010",31458427,31459116,".","--","--","--","--","protein GLUTAMINE DUMPER 6-like [Malus domestica]","GDU2_ARATH RecName: Full=Protein GLUTAMINE DUMPER 2;","A0A498J2H3_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89738.1};","--","GO:0016021,integral component of membrane; GO:0006865,amino acid transport; GO:0080143,regulation of amino acid export; GO:0006810,transport; GO:0008150,biological_process; GO:0015849,organic acid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0003333,amino acid transmembrane transport; GO:0009987,cellular process; GO:0015837,amine transport; GO:0032879,regulation of localization; GO:0032890,regulation of organic acid transport; GO:0032973,amino acid export across plasma membrane; GO:0034762,regulation of transmembrane transport; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051049,regulation of transport; GO:0051952,regulation of amine transport; GO:0051955,regulation of amino acid transport; GO:0055085,transmembrane transport; GO:0065007,biological regulation; GO:0140115,export across plasma membrane; GO:0140352,export from cell; GO:1903789,regulation of amino acid transmembrane transport; GO:1903825,organic acid transmembrane transport; GO:1905039,carboxylic acid transmembrane transport; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.91",0.0565,0.0566,0.0576,3.0095,5.7491,1.5793,1.5243,6.4408,4.7487,3.5469,2.8029,2.8446,3.4531,1.9478,2.4121,2,2,2,78,178,47,41,162,152,102,85,102,96,54,67,5.941518396,"1.87151E-19","4.2477E-18","up",5.81363661,"2.31434E-17","2.84947E-16","up",6.161479892,"4.66849E-15","5.0474E-14","up",6.499950947,"2.98426E-17","3.33766E-16","up",0.571916128,0.220229544,0.359242014,false,0.703825685,0.137636309,0.295279447,false,0.334727387,0.567177183,0.880293666,false,0.239902343,0.611807582,0.767144389,false,0.378255138,0.437816719,0.713503582,false,"chr_001",6101818,6103332,"+","--","--","--","--","uncharacterized protein LOC126588666 isoform X1 [Malus sylvestris]","POLR1_ARATH RecName: Full=Retrovirus-related Pol polyprotein from transposon RE1; AltName: Full=Retro element 1 {ECO:0000303|PubMed:10689195}; Short=AtRE1 {ECO:0000303|PubMed:10689195}; Includes: RecName: Full=Protease RE1; EC=3.4.23.-; Includes: RecName: Full=Reverse transcriptase RE1; EC=2.7.7.49; Includes: RecName: Full=Endonuclease RE1;","A0A5N5FU92_9ROSA RecName: Full=gag_pre-integrs domain-containing protein {ECO:0000259|Pfam:PF13976};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0004190,aspartic-type endopeptidase activity; GO:0004519,endonuclease activity; GO:0046872,metal ion binding; GO:0003676,nucleic acid binding; GO:0003964,RNA-directed DNA polymerase activity; GO:0015074,DNA integration; GO:0006310,DNA recombination; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0004518,nuclease activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034061,DNA polymerase activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0019538,protein metabolic process; GO:1901564,organonitrogen compound metabolic process","PF13917.9:Zinc knuckle","--","--","--"]
["novel.910",11.7683,13.6641,11.2368,0.5894,0.3483,0.8152,0.1336,0.393,1.0387,6.1868,4.978,4.5108,1.2282,2.3985,2.4909,464,537,434,17,12,27,4,11,37,198,168,180,38,74,77,-1.038049043,"4.75566E-07","2.60008E-06","down",-2.297200577,"5.86957E-19","8.18553E-18","down",-4.185846723,"3.95916E-45","2.94819E-43","down",-4.260188654,"7.53084E-22","1.15844E-20","down",-3.21622256,"6.85855E-10","1.14199E-08","down",-1.954890196,0.001022937,0.006727122,"down",-0.084878523,0.906671266,0.977657366,false,-3.134221088,"5.17752E-19","7.65491E-17","down",-1.866542491,"2.32778E-05",0.000674205,"down","chr_0010",31656497,31658776,"-","--","--","--","--","uncharacterized protein LOC126582944 isoform X33 [Malus sylvestris]","--","A0A498J8J6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89711.1};","--","--","PF01190.20:Pollen protein Ole e 1 like","--","--","--"]
["novel.911",126.1264,89.9245,61.0648,61.9417,28.4735,42.2425,18.2034,56.133,40.6021,77.1759,116.3815,76.4144,27.8906,51.123,63.8028,7365,5234,3493,2646,1453,2072,807,2327,2142,3658,5817,4516,1278,2336,2921,0.136032305,0.631350952,0.715377761,false,-0.678127295,0.035426899,0.058783456,false,-0.858630672,0.012405063,0.023093576,false,-0.993539431,0.010606364,0.020068646,false,-1.11622246,0.002472279,0.009450619,"down",-0.299406303,0.444635734,0.634353274,false,-0.129452631,0.751305756,0.938400558,false,-0.981458584,0.000987116,0.006180254,false,-0.159851039,0.641651231,0.843544338,false,"chr_0010",31745793,31776229,"-","--","--","--","--","hypothetical protein C1H46_014144 [Malus baccata]","CROS1_CROSA RecName: Full=Pollen allergen Cro s 1 {ECO:0000303|PubMed:26989701, ECO:0000312|EMBL:AAX93750.1}; AltName: Allergen=Cro s 1 {ECO:0000303|PubMed:26989701}; Flags: Precursor;","A0A540MN56_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE00226.1};","--","GO:0005615,extracellular space; GO:0005575,cellular_component; GO:0005576,extracellular region; GO:0110165,cellular anatomical entity","PF01190.20:Pollen protein Ole e 1 like","--","--","--"]
["novel.915",0.2156,0.2163,0.2338,0.7735,0.7862,0.9623,0.8695,0.3036,0.6114,0.3817,0.5194,0.6123,0.3605,0.6887,0.8248,16,16,17,42,51,60,49,16,41,23,33,46,21,40,48,1.373982068,0.000861474,0.002476645,"up",1.780802762,"5.78011E-05",0.000170693,"up",2.135102167,"4.58727E-09","2.53594E-08","up",1.708362967,0.000489782,0.001202328,"up",0.348664578,0.450246324,0.600398886,false,-0.058227193,0.903745539,0.947495981,false,-0.429582284,0.302203209,0.745065327,false,0.77688423,0.021095477,0.071760013,false,0.378118351,0.314530906,0.606129605,false,"chr_0010",31972523,31975696,".","--","--","K18185 cytochrome c oxidase assembly protein subunit 23 | (RefSeq) uncharacterized protein LOC103412072 (A)","--","uncharacterized protein LOC126601936 [Malus sylvestris]","RRPO_OENBE RecName: Full=RNA-directed DNA polymerase homolog; EC=2.7.7.48; AltName: Full=Reverse transcriptase homolog;","A0A2N9EZ27_FAGSY SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:SPC80093.1};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0005739,mitochondrion; GO:0003968,RNA-directed 5'-3' RNA polymerase activity; GO:0003964,RNA-directed DNA polymerase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034062,5'-3' RNA polymerase activity; GO:0097747,RNA polymerase activity; GO:0140098,catalytic activity, acting on RNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0034061,DNA polymerase activity; GO:0140097,catalytic activity, acting on DNA; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","PF17919.4:RNase H-like domain found in reverse transcriptase","--","--","--"]
["novel.917",0.2472,0.0827,0.0841,19.034,5.374,11.5743,25.8289,17.7568,1.6415,4.3647,3.0803,5.6172,1.05,1.8953,2.312,3,1,1,169,57,118,238,153,18,43,32,69,10,18,22,5.16839821,"2.58184E-11","2.59157E-10","up","NA","NA","NA","NA",6.641415994,"2.35344E-16","2.86705E-15","up",7.077091591,"4.17681E-08","1.89031E-07","up",1.919571966,0.007734284,0.024917782,"up",3.137535374,0.002283162,0.013069745,"up",0.430738006,0.682791751,0.918040158,false,1.490290918,0.001550868,0.008955348,"up",2.712618036,"7.7421E-08","5.41908E-06","up","chr_0010",31990589,31991487,"-","--","--","--","--","uncharacterized protein LOC125474119 isoform X1 [Pyrus x bretschneideri]","--","A0A5N5GA53_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2610410.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF06522.14:NADH-ubiquinone reductase complex 1 MLRQ subunit","--","--","--"]
["novel.922",5.6048,7.3544,5.4722,1.4822,3.0233,2.5635,2.2329,2.7751,2.5525,3.556,2.4444,2.0975,2.3354,2.5176,2.5128,367,480,351,71,173,141,111,129,151,189,137,139,120,129,129,-0.994954922,0.000209043,0.000697462,false,-1.032757306,"2.03448E-07","8.73438E-07","down",-1.162902582,0.00011205,0.000314415,"down",-1.005344716,"3.3338E-06","1.16355E-05","down",0.004285625,0.987946285,0.99371843,false,0.043151479,0.834588467,0.909345879,false,0.154552422,0.625642902,0.901258679,false,-0.151035459,0.673670137,0.81109176,false,-0.101983049,0.736672082,0.892910477,false,"chr_0010",32278574,32281591,"+","--","--","K07195 exocyst complex component 7 | (RefSeq) exocyst complex component EXO70E2-like (A)","--","exocyst complex component EXO70E2-like [Malus sylvestris]","E70E2_ARATH RecName: Full=Exocyst complex component EXO70E2 {ECO:0000303|PubMed:16942608}; Short=AtExo70e2 {ECO:0000303|PubMed:16942608}; AltName: Full=Exocyst subunit Exo70 family protein E2 {ECO:0000303|PubMed:16942608};","A0A498J4N9_MALDO RecName: Full=Exocyst subunit Exo70 family protein {ECO:0000256|RuleBase:RU365026};","Exocyst component protein and related proteins","GO:0005829,cytosol; GO:0012505,endomembrane system; GO:0000145,exocyst; GO:0070062,extracellular exosome; GO:0005576,extracellular region; GO:0005886,plasma membrane; GO:0005546,phosphatidylinositol-4,5-bisphosphate binding; GO:0052542,defense response by callose deposition; GO:0006887,exocytosis; GO:0006955,immune response; GO:1903553,positive regulation of extracellular exosome assembly; GO:0015031,protein transport; GO:1903533,regulation of protein targeting; GO:0003674,molecular_function; GO:0005488,binding; GO:0005543,phospholipid binding; GO:0008289,lipid binding; GO:0035091,phosphatidylinositol binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:1901981,phosphatidylinositol phosphate binding; GO:1902936,phosphatidylinositol bisphosphate binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009743,response to carbohydrate; GO:0010033,response to organic substance; GO:0033036,macromolecule localization; GO:0033037,polysaccharide localization; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051179,localization; GO:0052545,callose localization; GO:1901700,response to oxygen-containing compound; GO:0006810,transport; GO:0009987,cellular process; GO:0016192,vesicle-mediated transport; GO:0032940,secretion by cell; GO:0046903,secretion; GO:0051234,establishment of localization; GO:0140352,export from cell; GO:0002376,immune system process; GO:0006996,organelle organization; GO:0010638,positive regulation of organelle organization; GO:0016043,cellular component organization; GO:0016050,vesicle organization; GO:0022607,cellular component assembly; GO:0033043,regulation of organelle organization; GO:0044085,cellular component biogenesis; GO:0044087,regulation of cellular component biogenesis; GO:0044089,positive regulation of cellular component biogenesis; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051128,regulation of cellular component organization; GO:0051130,positive regulation of cellular component organization; GO:0065007,biological regulation; GO:0070925,organelle assembly; GO:0071840,cellular component organization or biogenesis; GO:0071971,extracellular exosome assembly; GO:0097734,extracellular exosome biogenesis; GO:0140112,extracellular vesicle biogenesis; GO:1902115,regulation of organelle assembly; GO:1902117,positive regulation of organelle assembly; GO:1903551,regulation of extracellular exosome assembly; GO:0008104,protein localization; GO:0045184,establishment of protein localization; GO:0051641,cellular localization; GO:0070727,cellular macromolecule localization; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:0006605,protein targeting; GO:0006886,intracellular protein transport; GO:0032386,regulation of intracellular transport; GO:0032879,regulation of localization; GO:0032880,regulation of protein localization; GO:0033157,regulation of intracellular protein transport; GO:0046907,intracellular transport; GO:0051049,regulation of transport; GO:0051223,regulation of protein transport; GO:0051649,establishment of localization in cell; GO:0060341,regulation of cellular localization; GO:0070201,regulation of establishment of protein localization; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0005938,cell cortex; GO:0032991,protein-containing complex; GO:0071944,cell periphery; GO:0099023,vesicle tethering complex; GO:0005615,extracellular space; GO:0031982,vesicle; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043230,extracellular organelle; GO:0065010,extracellular membrane-bounded organelle; GO:1903561,extracellular vesicle; GO:0016020,membrane","PF03081.18:Exo70 exocyst complex subunit","--","--","--"]
["novel.923",23.4476,24.6068,27.5701,11.2073,8.6722,11.4008,11.7368,13.3925,11.2354,8.3464,12.3419,10.9826,7.6385,7.1316,8.0846,1021,1068,1176,357,330,417,388,414,442,295,460,484,261,243,276,-1.072829588,"4.80846E-11","4.66343E-10","down",-1.432297725,"7.22043E-25","1.53101E-23","down",-1.06250437,"2.02498E-11","1.49779E-10","down",-0.770056743,"1.07621E-06","4.04106E-06",false,0.315207567,0.106567714,0.207075914,false,0.677095804,"8.1527E-05",0.000813301,false,0.291430543,0.113976994,0.553603927,false,0.026665754,0.893088389,0.943439271,false,0.394585855,0.022573992,0.125919653,false,"chr_0010",32302632,32307728,"+","--","--","K14863 ribosome biogenesis protein | (RefSeq) ribosome biogenesis protein WDR12 homolog (A)","--","ribosome biogenesis protein WDR12 homolog [Malus sylvestris]","WDR12_ARATH RecName: Full=Ribosome biogenesis protein WDR12 homolog {ECO:0000255|HAMAP-Rule:MF_03029}; AltName: Full=Pescadillo-interacting protein 2 {ECO:0000305}; Short=AtPEIP2 {ECO:0000303|PubMed:25443833};","A0A5N5G5C2_9ROSA RecName: Full=Ribosome biogenesis protein WDR12 homolog {ECO:0000256|HAMAP-Rule:MF_03029};","Microtubule binding protein YTM1 (contains WD40 repeats)","GO:0080008,Cul4-RING E3 ubiquitin ligase complex; GO:0005730,nucleolus; GO:0005654,nucleoplasm; GO:0009506,plasmodesma; GO:0030687,preribosome, large subunit precursor; GO:0043021,ribonucleoprotein complex binding; GO:0000466,maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0000463,maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); GO:0003674,molecular_function; GO:0005488,binding; GO:0044877,protein-containing complex binding; GO:0000460,maturation of 5.8S rRNA; GO:0006139,nucleobase-containing compound metabolic process; GO:0006364,rRNA processing; GO:0006396,RNA processing; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0016072,rRNA metabolic process; GO:0022613,ribonucleoprotein complex biogenesis; GO:0034470,ncRNA processing; GO:0034641,cellular nitrogen compound metabolic process; GO:0034660,ncRNA metabolic process; GO:0042254,ribosome biogenesis; GO:0043170,macromolecule metabolic process; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0071840,cellular component organization or biogenesis; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0000470,maturation of LSU-rRNA; GO:0042273,ribosomal large subunit biogenesis; GO:0000151,ubiquitin ligase complex; GO:0005575,cellular_component; GO:0031461,cullin-RING ubiquitin ligase complex; GO:0032991,protein-containing complex; GO:0140535,intracellular protein-containing complex; GO:1902494,catalytic complex; GO:1990234,transferase complex; GO:0005622,intracellular anatomical structure; GO:0005634,nucleus; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity; GO:0005911,cell-cell junction; GO:0030054,cell junction; GO:0055044,symplast; GO:0070161,anchoring junction; GO:0030684,preribosome; GO:1990904,ribonucleoprotein complex","PF00400.35:WD domain, G-beta repeat","--","--","--"]
["novel.924",1.0799,0.4841,0.3049,3.7692,7.1255,2.2157,10.6535,10.5191,5.8496,1.6702,0.349,1.0217,3.5138,2.1142,2.3153,47,21,13,120,271,81,352,325,230,59,13,45,120,72,79,0.902901898,0.173972149,0.253753031,false,2.375036626,"1.86772E-07","8.06532E-07","up",3.040296767,"6.23716E-08","2.91877E-07","up",4.138658071,"2.87633E-21","4.26787E-20","up",3.253814369,"2.728E-11","5.61126E-10","up",1.77558728,"4.81535E-08","1.19726E-06","up",1.088614036,0.016150833,0.255236729,false,2.163946199,0.000279487,0.002163317,"up",0.695156252,0.123581166,0.365697061,false,"chr_0010",32330378,32334648,"+","--","--","K03124 transcription initiation factor TFIIB | (RefSeq) transcription initiation factor IIB-2-like (A)","ko03022: Basal transcription factors","hypothetical protein C1H46_019061 [Malus baccata]","TF2B_SOYBN RecName: Full=Transcription initiation factor IIB; AltName: Full=General transcription factor TFIIB;","A0A540M9Y4_MALBA RecName: Full=TFIIB-type domain-containing protein {ECO:0000259|PROSITE:PS51134};","Transcription initiation factor TFIIB","GO:0005634,nucleus; GO:0097550,transcription preinitiation complex; GO:0046872,metal ion binding; GO:0017025,TBP-class protein binding; GO:0006352,DNA-templated transcription initiation; GO:0070897,transcription preinitiation complex assembly; GO:0003674,molecular_function; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0005515,protein binding; GO:0008134,transcription factor binding; GO:0140296,general transcription initiation factor binding; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019438,aromatic compound biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0043933,protein-containing complex organization; GO:0044085,cellular component biogenesis; GO:0065003,protein-containing complex assembly; GO:0065004,protein-DNA complex assembly; GO:0071824,protein-DNA complex subunit organization; GO:0071840,cellular component organization or biogenesis; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0032993,protein-DNA complex","PF00382.22:Transcription factor TFIIB repeat","--","--","--"]
["novel.925",55.3679,61.5178,65.6334,22.2648,18.6958,22.0317,17.1364,17.9707,22.1028,31.7454,39.5303,40.5572,27.6323,34.2829,28.8144,1098,1216,1275,323,324,367,258,253,396,511,671,814,430,532,448,-0.521260608,0.000179943,0.000610293,false,-0.715575756,"5.90556E-07","2.37646E-06",false,-1.32187516,"1.18958E-19","1.9394E-18","down",-1.390932591,"6.18631E-20","8.36939E-19","down",-0.856467386,"3.88425E-07","3.93917E-06",false,-0.659736585,0.000164638,0.001479229,false,-0.070221441,0.686450481,0.919194787,false,-0.783381217,"1.09337E-06","1.79097E-05",false,-0.58107833,0.000429269,0.007003232,false,"chr_0010",32359053,32361062,"-","--","--","K02996 small subunit ribosomal protein S9 | (RefSeq) 30S ribosomal protein S9, chloroplastic-like (A)","ko03010: Ribosome","30S ribosomal protein S9, chloroplastic-like [Malus sylvestris]","RR9_ARATH RecName: Full=30S ribosomal protein S9, chloroplastic; Flags: Precursor;","A0A5N5G9I2_9ROSA SubName: Full=30S ribosomal protein S9 {ECO:0000313|EMBL:KAB2610371.1};","Mitochondrial/chloroplast ribosomal protein S9","GO:0009507,chloroplast; GO:0009941,chloroplast envelope; GO:0009570,chloroplast stroma; GO:0005739,mitochondrion; GO:0000312,plastid small ribosomal subunit; GO:0015935,small ribosomal subunit; GO:0003729,mRNA binding; GO:0003723,RNA binding; GO:0019843,rRNA binding; GO:0003735,structural constituent of ribosome; GO:0006412,translation; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005198,structural molecule activity; GO:0006518,peptide metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009987,cellular process; GO:0010467,gene expression; GO:0019538,protein metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034645,cellular macromolecule biosynthetic process; GO:0043043,peptide biosynthetic process; GO:0043170,macromolecule metabolic process; GO:0043603,cellular amide metabolic process; GO:0043604,amide biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044260,cellular macromolecule metabolic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901566,organonitrogen compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0009536,plastid; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0009526,plastid envelope; GO:0031967,organelle envelope; GO:0031975,envelope; GO:0009532,plastid stroma; GO:0000313,organellar ribosome; GO:0000314,organellar small ribosomal subunit; GO:0005840,ribosome; GO:0009547,plastid ribosome; GO:0032991,protein-containing complex; GO:0043228,non-membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0044391,ribosomal subunit; GO:1990904,ribonucleoprotein complex","PF00380.22:Ribosomal protein S9/S16","--","--","--"]
["novel.926",2.2998,1.4661,2.0298,5.1086,6.0308,9.2118,2.9661,2.5308,3.4471,3.6892,5.5415,3.9529,4.2129,6.8576,3.3917,96,61,83,156,220,323,94,75,130,125,198,167,138,224,111,1.3658451,"2.70105E-07","1.53604E-06","up",1.610130199,"3.95378E-07","1.62741E-06","up",2.018256597,"7.61958E-12","5.87971E-11","up",0.908216422,0.00076391,0.001812885,false,-0.44536788,0.071181395,0.15195992,false,-0.687901858,0.024727414,0.085375137,false,-1.111894422,"4.60679E-05",0.008413036,"down",0.667549485,0.016824126,0.060530602,false,0.432814094,0.18418703,0.456833503,false,"chr_0010",32371363,32373712,"+","--","--","K13691 pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 74F2-like (A)","--","UDP-glycosyltransferase 83A1-like [Malus sylvestris]","U83A1_ARATH RecName: Full=UDP-glycosyltransferase 83A1; EC=2.4.1.-;","A0A540M949_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD95274.1}; Flags: Fragment;","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0008194,UDP-glycosyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity","PF00201.21:UDP-glucoronosyl and UDP-glucosyl transferase","--","--","--"]
["novel.927",5.7599,6.657,5.0332,7.3382,9.0693,12.4799,5.3715,3.7322,5.2278,8.1747,11.0359,12.1108,7.4576,15.8993,13.1064,250,288,214,233,344,455,177,115,205,288,410,532,254,540,446,1.024728195,"6.24021E-07","3.33764E-06","up",1.347481186,"8.16308E-07","3.23034E-06","up",0.933367763,0.000120887,0.000337494,false,-0.004077636,0.985688585,0.989446819,false,-1.015289346,"6.91857E-06","5.33466E-05","down",-1.337425661,"5.11723E-06","7.5086E-05","down",-0.939954108,0.000245737,0.025864261,false,-0.073411244,0.762767412,0.868434545,false,-0.389881051,0.203370811,0.482787954,false,"chr_0010",32378446,32380810,"+","--","--","K13691 pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 74F2-like (A)","--","UDP-glycosyltransferase 83A1-like [Malus sylvestris]","U83A1_ARATH RecName: Full=UDP-glycosyltransferase 83A1; EC=2.4.1.-;","A0A498J1R4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89659.1};","UDP-glucuronosyl and UDP-glucosyl transferase","GO:0008194,UDP-glycosyltransferase activity; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016740,transferase activity; GO:0016757,glycosyltransferase activity","PF00201.21:UDP-glucoronosyl and UDP-glucosyl transferase","--","--","--"]
["novel.929",1.3052,1.8952,1.4376,0.3756,0.9826,1.3902,0.2262,0.4838,0.6463,0.7193,1.0433,0.7805,1.0942,0.6145,0.8762,38,55,41,8,25,34,5,10,17,17,26,23,25,14,20,-0.686281654,0.070003457,0.117812641,false,-0.548569242,0.174139637,0.237369627,false,-0.539961042,0.276076027,0.352201496,false,-1.486518726,0.002450861,0.005297378,"down","NA","NA","NA","NA",-0.922457891,0.107791263,0.249365291,false,-0.948804025,0.149753067,0.604248668,false,0.161434085,0.770294098,0.873360969,false,0.033711441,0.952123582,0.985031406,false,"chr_0010",32432538,32435692,"-","--","--","K04354 serine/threonine-protein phosphatase 2A regulatory subunit B | (RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 (A)","ko03015: mRNA surveillance pathway","hypothetical protein C1H46_045886 [Malus baccata]","MOF1_ORYSJ RecName: Full=Myb family transcription factor MOF1 {ECO:0000305}; AltName: Full=Protein MORE FLORET 1 {ECO:0000303|PubMed:32680975};","A0A540K2T2_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD68581.1};","--","GO:0005634,nucleus; GO:0003677,DNA binding; GO:0003700,DNA-binding transcription factor activity; GO:0030154,cell differentiation; GO:0010582,floral meristem determinacy; GO:0010629,negative regulation of gene expression; GO:0006355,regulation of DNA-templated transcription; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0140110,transcription regulator activity; GO:0008150,biological_process; GO:0009987,cellular process; GO:0032502,developmental process; GO:0048869,cellular developmental process; GO:0000003,reproduction; GO:0003006,developmental process involved in reproduction; GO:0007275,multicellular organism development; GO:0009791,post-embryonic development; GO:0009888,tissue development; GO:0009908,flower development; GO:0010022,meristem determinacy; GO:0010073,meristem maintenance; GO:0022414,reproductive process; GO:0032501,multicellular organismal process; GO:0048367,shoot system development; GO:0048507,meristem development; GO:0048608,reproductive structure development; GO:0048731,system development; GO:0048856,anatomical structure development; GO:0061458,reproductive system development; GO:0090567,reproductive shoot system development; GO:0008152,metabolic process; GO:0009892,negative regulation of metabolic process; GO:0010467,gene expression; GO:0010468,regulation of gene expression; GO:0010605,negative regulation of macromolecule metabolic process; GO:0019222,regulation of metabolic process; GO:0043170,macromolecule metabolic process; GO:0048519,negative regulation of biological process; GO:0050789,regulation of biological process; GO:0060255,regulation of macromolecule metabolic process; GO:0065007,biological regulation; GO:0071704,organic substance metabolic process; GO:0006139,nucleobase-containing compound metabolic process; GO:0006351,DNA-templated transcription; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0009058,biosynthetic process; GO:0009059,macromolecule biosynthetic process; GO:0009889,regulation of biosynthetic process; GO:0010556,regulation of macromolecule biosynthetic process; GO:0016070,RNA metabolic process; GO:0018130,heterocycle biosynthetic process; GO:0019219,regulation of nucleobase-containing compound metabolic process; GO:0019438,aromatic compound biosynthetic process; GO:0031323,regulation of cellular metabolic process; GO:0031326,regulation of cellular biosynthetic process; GO:0032774,RNA biosynthetic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034654,nucleobase-containing compound biosynthetic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044249,cellular biosynthetic process; GO:0044271,cellular nitrogen compound biosynthetic process; GO:0046483,heterocycle metabolic process; GO:0050794,regulation of cellular process; GO:0051171,regulation of nitrogen compound metabolic process; GO:0051252,regulation of RNA metabolic process; GO:0080090,regulation of primary metabolic process; GO:0090304,nucleic acid metabolic process; GO:0097659,nucleic acid-templated transcription; GO:1901360,organic cyclic compound metabolic process; GO:1901362,organic cyclic compound biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:1903506,regulation of nucleic acid-templated transcription; GO:2001141,regulation of RNA biosynthetic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","GARP-G2-like","TF","GARP->GARP-G2-like"]
["novel.932",17.4118,22.1567,20.7808,30.4519,26.5903,28.8829,29.0897,30.2071,28.4837,36.2775,36.2718,38.0768,37.5255,38.4489,30.7816,272,345,318,348,363,379,345,335,402,460,485,602,460,470,377,1.062461455,"7.35945E-12","7.80334E-11","up",1.117358606,"2.07062E-10","1.29769E-09","up",0.723891312,"2.45432E-05","7.72038E-05",false,0.825067786,"1.35555E-06","5.01268E-06",false,-0.224971158,0.115561855,0.220282516,false,-0.2771571,0.104333292,0.243600069,false,0.09918451,0.527760825,0.865908576,false,-0.321262767,0.027401699,0.087631364,false,-0.367721766,0.032168223,0.160050046,false,"chr_0010",32493524,32495516,"-","--","--","K22069 LYR motif-containing protein 4 | (RefSeq) LYR motif-containing protein 4 (A)","--","uncharacterized protein LOC126582769 [Malus sylvestris]","--","A0A498J5X9_MALDO RecName: Full=Complex1_LYR_dom domain-containing protein {ECO:0000259|Pfam:PF05347};","Uncharacterized conserved protein BCN92","GO:0016226,iron-sulfur cluster assembly; GO:0006790,sulfur compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0016043,cellular component organization; GO:0022607,cellular component assembly; GO:0031163,metallo-sulfur cluster assembly; GO:0044085,cellular component biogenesis; GO:0044237,cellular metabolic process; GO:0071840,cellular component organization or biogenesis","PF05347.18:Complex 1 protein (LYR family)","--","--","--"]
["novel.933",1.5143,1.1575,0.9754,0.1971,0.0825,0.0644,0.2137,0.127,0.0998,0.0666,0.3791,0.0713,0.2068,0.0922,0,84,64,53,8,4,3,9,5,5,3,18,4,9,4,0,-2.667172016,"1.16208E-05","4.95751E-05","down",-3.312773066,"1.08951E-07","4.86188E-07","down",-3.226446002,"5.16687E-09","2.83192E-08","down",-2.783315759,"3.61286E-08","1.65028E-07","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",32574390,32578590,"+","--","--","K05391 cyclic nucleotide gated channel, plant | (RefSeq) cyclic nucleotide-gated ion channel 2-like (A)","ko04626: Plant-pathogen interaction","cyclic nucleotide-gated ion channel 2-like [Malus sylvestris]","CNGC2_ARATH RecName: Full=Cyclic nucleotide-gated ion channel 2; Short=AtCNGC2; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 2; AltName: Full=Protein DEFENSE NO DEATH 1;","A0A5N5GIU6_9ROSA SubName: Full=Cyclic nucleotide-gated ion channel 2-like {ECO:0000313|EMBL:KAB2613791.1};","K+-channel ERG and related proteins, contain PAS/PAC sensor domain","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0005262,calcium channel activity; GO:0005516,calmodulin binding; GO:0030552,cAMP binding; GO:0030553,cGMP binding; GO:0005222,intracellular cAMP-activated cation channel activity; GO:0005221,intracellular cyclic nucleotide activated cation channel activity; GO:0005242,inward rectifier potassium channel activity; GO:0070509,calcium ion import; GO:0006952,defense response; GO:0007263,nitric oxide mediated signal transduction; GO:0009626,plant-type hypersensitive response; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005216,ion channel activity; GO:0005261,cation channel activity; GO:0008324,cation transmembrane transporter activity; GO:0015075,ion transmembrane transporter activity; GO:0015085,calcium ion transmembrane transporter activity; GO:0015267,channel activity; GO:0015318,inorganic molecular entity transmembrane transporter activity; GO:0022803,passive transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0022890,inorganic cation transmembrane transporter activity; GO:0046873,metal ion transmembrane transporter activity; GO:0005488,binding; GO:0005515,protein binding; GO:0000166,nucleotide binding; GO:0017076,purine nucleotide binding; GO:0030551,cyclic nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0019001,guanyl nucleotide binding; GO:0032561,guanyl ribonucleotide binding; GO:0005217,intracellular ligand-gated ion channel activity; GO:0015276,ligand-gated ion channel activity; GO:0022834,ligand-gated channel activity; GO:0022836,gated channel activity; GO:0043855,cyclic nucleotide-gated ion channel activity; GO:0099094,ligand-gated cation channel activity; GO:0005244,voltage-gated ion channel activity; GO:0005249,voltage-gated potassium channel activity; GO:0005267,potassium channel activity; GO:0015079,potassium ion transmembrane transporter activity; GO:0022832,voltage-gated channel activity; GO:0022843,voltage-gated cation channel activity; GO:0006810,transport; GO:0006811,ion transport; GO:0006812,cation transport; GO:0006816,calcium ion transport; GO:0008150,biological_process; GO:0030001,metal ion transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009987,cellular process; GO:0019932,second-messenger-mediated signaling; GO:0023052,signaling; GO:0035556,intracellular signal transduction; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0012501,programmed cell death; GO:0033554,cellular response to stress; GO:0034050,programmed cell death induced by symbiont; GO:0043207,response to external biotic stimulus; GO:0044403,biological process involved in symbiotic interaction; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00520.34:Ion transport protein","--","--","--"]
["novel.936",2.7142,2.8772,4.13,1.4701,0.7618,0.4877,1.6189,0.505,1.8139,2.082,1.9744,2.5806,1.3705,2.1597,0.9798,53,56,79,21,13,8,24,7,32,33,33,51,21,33,15,-0.355505685,0.271108559,0.365023192,false,-0.811788877,0.039809751,0.065126592,false,-1.628227175,0.000698516,0.001691821,"down",-1.011734748,0.028592736,0.048895435,"down",-0.64212952,0.193944492,0.326507268,false,-0.188399378,0.739211422,0.853443936,false,0.600098812,0.361630576,0.786579674,false,-1.251690798,0.013944345,0.052228277,false,-0.78692415,0.177477151,0.44831055,false,"chr_0010",32743044,32744413,"+","--","--","--","--","hypothetical protein C1H46_040748 [Malus baccata]","--","A0A540KHP6_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD73724.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.938",8.6113,9.5275,11.5841,2.7503,2.2716,4.5031,3.6395,2.8341,2.6427,4.66,7.7413,5.4073,3.8289,4.4567,3.8323,321,354,423,75,74,141,103,75,89,141,247,204,112,130,112,-0.557663483,0.01246854,0.026634222,false,-0.999586665,"1.52248E-07","6.64637E-07",false,-1.43624951,"1.4962E-07","6.66058E-07","down",-1.418469764,"4.69558E-10","2.71407E-09","down",-0.849532144,0.001951846,0.007719875,false,-0.404732199,0.096552383,0.230295991,false,0.018265047,0.9541404,0.988247825,false,-0.865108684,0.005855354,0.026126363,false,-0.412283546,0.150538119,0.408839466,false,"chr_0010",33061606,33064168,"+","--","--","--","--","hypothetical protein D8674_036127 [Pyrus ussuriensis x Pyrus communis]","--","A0A5N5GIW4_9ROSA RecName: Full=DUF3598 domain-containing protein {ECO:0000259|Pfam:PF12204};","--","GO:0051301,cell division; GO:0032955,regulation of division septum assembly; GO:0008150,biological_process; GO:0009987,cellular process; GO:0000910,cytokinesis; GO:0000917,division septum assembly; GO:0007049,cell cycle; GO:0010564,regulation of cell cycle process; GO:0016043,cellular component organization; GO:0022402,cell cycle process; GO:0022607,cellular component assembly; GO:0032506,cytokinetic process; GO:0032954,regulation of cytokinetic process; GO:0044085,cellular component biogenesis; GO:0044087,regulation of cellular component biogenesis; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051128,regulation of cellular component organization; GO:0051726,regulation of cell cycle; GO:0065007,biological regulation; GO:0071840,cellular component organization or biogenesis; GO:0090529,cell septum assembly; GO:1901891,regulation of cell septum assembly","PF12204.11:Domain of unknown function (DUF3598)","--","--","--"]
["novel.940",1.0617,1.91,0.2616,4.1538,7.2476,3.0945,4.0507,10.4172,6.4432,1.0374,0.5988,1.1937,9.4711,3.275,1.4476,29,52,7,83,173,71,84,202,159,23,14,33,203,70,31,-0.007026257,0.991726565,0.993946472,false,2.432174419,0.017531491,0.031467406,"up",2.386815908,0.000104207,0.000294238,"up",2.967023331,"2.1952E-07","9.04532E-07","up",2.989797555,"1.12159E-11","2.43392E-10","up",0.553860801,0.340987217,0.538008966,false,0.576797818,0.201012715,0.658603997,false,2.416652828,"1.91967E-07","3.85932E-06","up",-0.012954494,0.983029883,0.994983469,false,"chr_0010",33124966,33127701,"-","--","--","--","--","uncharacterized protein LOC103418694 isoform X1 [Malus domestica]","--","A0A5N5GIT0_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2613771.1};","--","--","PF09366.13:Protein of unknown function (DUF1997)","--","--","--"]
["novel.942",425.0741,488.2601,422.4254,141.7413,132.6505,177.496,130.2289,117.6933,156.3362,104.5324,127.0139,92.9528,107.666,128.8663,111.4629,16402,18779,15967,4001,4473,5753,3815,3224,5450,3274,4195,3630,3260,3891,3372,-1.857682336,"5.77148E-33","3.37061E-31","down",-1.649778813,"1.25858E-35","5.17752E-34","down",-1.355509421,"3.08587E-19","4.8911E-18","down",-1.446513077,"9.86991E-23","1.59495E-21","down",0.423869689,0.013953176,0.040464924,false,0.219524516,0.14565777,0.306827852,false,-0.091566214,0.570637058,0.881834657,false,0.517675561,0.003157843,0.015922146,false,0.319333146,0.03334886,0.163626842,false,"chr_0010",33195434,33197476,"+","--","--","--","--","hypothetical protein C1H46_041003 [Malus baccata]","Y5957_ARATH RecName: Full=Uncharacterized protein At5g39570;","A0A540KGZ6_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD73459.1};","--","GO:0005829,cytosol; GO:0009536,plastid; GO:0003729,mRNA binding; GO:0070300,phosphatidic acid binding; GO:0003674,molecular_function; GO:0003676,nucleic acid binding; GO:0003723,RNA binding; GO:0005488,binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0005543,phospholipid binding; GO:0008289,lipid binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","--","--","--","--"]
["novel.944",0.7301,0.7848,1.7035,1.7108,2.0886,2.4833,2.1293,0.9549,1.5007,1.4134,1.7668,2.1641,1.5949,1.9993,1.7294,14,15,32,24,35,40,31,13,26,22,29,42,24,30,26,0.927463396,0.05024418,0.088690387,false,1.026348166,0.026732738,0.045763584,"up",1.187660005,0.011483812,0.021565904,"up",0.80584622,0.131726723,0.18753266,false,-0.111194953,0.803867353,0.877942727,false,-0.206689039,0.63723722,0.785295248,false,-0.387350883,0.372378876,0.792502458,false,0.276885996,0.467750052,0.652753089,false,0.188987632,0.610359582,0.827467321,false,"chr_0010",33277953,33278772,".","--","--","--","--","uncharacterized protein LOC126618712 [Malus sylvestris]","--","A0A498K3S5_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI00964.1};","--","--","PF06156.16:Initiation control protein YabA","--","--","--"]
["novel.947",4.0945,3.7541,2.519,0.556,0.3103,0.8393,0.1429,0.2674,0.09,0.7683,2.9145,1.7147,0.6911,0.8317,0.3113,151,138,91,15,10,26,4,7,3,23,92,64,20,24,9,-0.778440425,0.072404799,0.121151412,false,-2.209987004,"2.88808E-08","1.39381E-07","down",-2.409179952,"5.23772E-09","2.86943E-08","down",-4.136142963,"1.52194E-15","1.4958E-14","down",-3.328379433,"8.01944E-07","7.57314E-06","down",-1.891974193,0.008829262,0.038650268,"down","NA","NA","NA","NA",-1.619930668,0.004579047,0.021495848,"down",-0.177666101,0.76087545,0.904876034,false,"chr_0010",33403159,33405327,"-","--","--","K15015 solute carrier family 32 (vesicular inhibitory amino acid transporter) | (RefSeq) amino acid transporter AVT1I (A)","--","hypothetical protein DVH24_031908 [Malus domestica]","AVT1I_ARATH RecName: Full=Amino acid transporter AVT1I {ECO:0000305}; Short=AtAvt1I {ECO:0000303|PubMed:27925655};","A0A498J830_MALDO RecName: Full=Aa_trans domain-containing protein {ECO:0000259|Pfam:PF01490};","Amino acid transporters","GO:0016021,integral component of membrane; GO:0016020,membrane; GO:0000325,plant-type vacuole; GO:0015171,amino acid transmembrane transporter activity; GO:0003333,amino acid transmembrane transport; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005342,organic acid transmembrane transporter activity; GO:0022857,transmembrane transporter activity; GO:0046943,carboxylic acid transmembrane transporter activity; GO:0006810,transport; GO:0006865,amino acid transport; GO:0008150,biological_process; GO:0009987,cellular process; GO:0015849,organic acid transport; GO:0051179,localization; GO:0051234,establishment of localization; GO:0055085,transmembrane transport; GO:0071702,organic substance transport; GO:0071705,nitrogen compound transport; GO:1903825,organic acid transmembrane transport; GO:1905039,carboxylic acid transmembrane transport; GO:0005575,cellular_component; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0005773,vacuole; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01490.21:Transmembrane amino acid transporter protein","--","--","--"]
["novel.949",3.6447,2.8841,1.5721,6.105,3.2896,2.3223,4.8684,6.7248,8.1253,0.7589,1.7992,1.4709,4.1868,2.1649,0.9167,71,56,30,87,56,38,72,93,143,12,30,29,64,33,14,-0.835084877,0.076937109,0.127699871,false,0.139421182,0.799513207,0.844456341,false,0.744028997,0.123743037,0.176762707,false,1.553984147,"2.18946E-05","6.76251E-05","up",2.399336448,"1.08783E-10","2.04506E-09","up",1.432315861,0.002873748,0.015741338,"up",0.813760992,0.045644412,0.387408528,false,1.595332969,0.001506765,0.008748731,"up",0.631294461,0.273319488,0.563808793,false,"chr_0010",33539382,33540841,"+","--","--","--","--","hypothetical protein DVH24_031894 [Malus domestica]","--","A0A498J4I6_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89537.1};","--","--","--","--","--","--"]
["novel.95",0.7971,0.4386,0.2362,13.7786,22.0974,8.2345,18.8651,29.1571,25.0175,15.0156,7.1497,11.8395,16.4824,12.8812,15.0866,31,17,9,392,751,269,557,805,879,474,238,466,503,392,460,4.722726777,"6.28966E-28","2.68592E-26","up",5.20271908,"7.19377E-59","7.37786E-57","up",5.132394405,"4.98502E-26","1.33769E-24","up",5.908032363,"1.53344E-63","1.62928E-61","up",1.201737865,0.0001173,0.000662561,"up",0.721632544,0.000765939,0.005321572,false,0.770178544,0.040827724,0.373720068,false,0.43346547,0.300624755,0.490563056,false,-0.040506978,0.909926212,0.968784464,false,"chr_001",6125606,6128378,"+","--","--","--","--","hypothetical protein DVH24_012432 [Malus domestica]","PLP2_ARATH RecName: Full=Patatin-like protein 2; Short=AtPLP2; EC=3.1.1.-; AltName: Full=Patatin-related phospholipase A IIalpha; Short=pPLAIIa; AltName: Full=Phospholipase A IIA; Short=AtPLAIIA;","A0A498HMM0_MALDO RecName: Full=Patatin {ECO:0000256|RuleBase:RU361262}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361262};","Ca2+-independent phospholipase A2","GO:0005737,cytoplasm; GO:0016020,membrane; GO:0005777,peroxisome; GO:0047372,acylglycerol lipase activity; GO:0042802,identical protein binding; GO:0016298,lipase activity; GO:0004620,phospholipase activity; GO:0071456,cellular response to hypoxia; GO:0051607,defense response to virus; GO:0016042,lipid catabolic process; GO:0006629,lipid metabolic process; GO:0031408,oxylipin biosynthetic process; GO:0009626,plant-type hypersensitive response; GO:0046686,response to cadmium ion; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0052689,carboxylic ester hydrolase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009615,response to virus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0140546,defense response to symbiont; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0006082,organic acid metabolic process; GO:0009058,biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0031407,oxylipin metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0012501,programmed cell death; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0042579,microbody; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","--","--","--","--"]
["novel.950",1.2729,0.6558,0.8077,0.047,0.1181,0.2457,0.0906,0.0969,0.1142,0.4662,1.9292,1.0537,0.4822,0.7913,0.3072,37,19,23,1,3,6,2,2,3,11,48,31,11,18,7,0.49863607,0.369952278,0.469264703,false,-0.503196898,0.359195364,0.439821364,false,-2.510509564,0.000699484,0.001693889,"down",-2.896785831,0.000171189,0.000454478,"down",-3.384922294,"4.64775E-05",0.00029093,"down","NA","NA","NA","NA","NA","NA","NA","NA",-2.999901851,0.000227031,0.001810828,"down","NA","NA","NA","NA","chr_0010",33732337,33734169,"+","--","--","K13947 auxin efflux carrier family protein | (RefSeq) probable auxin efflux carrier component 8 (A)","--","probable auxin efflux carrier component 8 [Malus sylvestris]","PIN8_ARATH RecName: Full=Auxin efflux carrier component 8 {ECO:0000303|PubMed:15817418}; Short=AtPIN8 {ECO:0000303|PubMed:15817418};","A0A5N5GEL0_9ROSA RecName: Full=Auxin efflux carrier component {ECO:0000256|RuleBase:RU362108};","--","GO:0005783,endoplasmic reticulum; GO:0005789,endoplasmic reticulum membrane; GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0010329,auxin efflux transmembrane transporter activity; GO:0010315,auxin export across the plasma membrane; GO:0010252,auxin homeostasis; GO:0009926,auxin polar transport; GO:0009734,auxin-activated signaling pathway; GO:0009555,pollen development; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0022857,transmembrane transporter activity; GO:0080161,auxin transmembrane transporter activity; GO:0006810,transport; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0008150,biological_process; GO:0009719,response to endogenous stimulus; GO:0009725,response to hormone; GO:0009733,response to auxin; GO:0009755,hormone-mediated signaling pathway; GO:0009914,hormone transport; GO:0009966,regulation of signal transduction; GO:0009987,cellular process; GO:0010033,response to organic substance; GO:0010646,regulation of cell communication; GO:0010817,regulation of hormone levels; GO:0010928,regulation of auxin mediated signaling pathway; GO:0023051,regulation of signaling; GO:0023052,signaling; GO:0032870,cellular response to hormone stimulus; GO:0042221,response to chemical; GO:0048583,regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0050896,response to stimulus; GO:0051179,localization; GO:0051234,establishment of localization; GO:0051716,cellular response to stimulus; GO:0055085,transmembrane transport; GO:0060918,auxin transport; GO:0065007,biological regulation; GO:0065008,regulation of biological quality; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071365,cellular response to auxin stimulus; GO:0071495,cellular response to endogenous stimulus; GO:0140115,export across plasma membrane; GO:0140352,export from cell; GO:0042592,homeostatic process; GO:0048878,chemical homeostasis; GO:0007275,multicellular organism development; GO:0032501,multicellular organismal process; GO:0032502,developmental process; GO:0048229,gametophyte development; GO:0048856,anatomical structure development; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0005737,cytoplasm; GO:0012505,endomembrane system; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity; GO:0016020,membrane; GO:0031090,organelle membrane; GO:0031984,organelle subcompartment; GO:0042175,nuclear outer membrane-endoplasmic reticulum membrane network; GO:0098827,endoplasmic reticulum subcompartment; GO:0031224,intrinsic component of membrane; GO:0071944,cell periphery","PF03547.21:Membrane transport protein","--","--","--"]
["novel.952",9.632,11.7203,11.3837,3.8915,4.1522,4.8466,2.72,2.1609,3.7715,3.9252,6.738,7.5496,3.3271,4.3732,3.4994,653,792,756,193,246,276,140,104,231,216,391,518,177,232,186,-0.666168805,0.004923536,0.011748661,false,-1.255228055,"2.55863E-13","2.18107E-12","down",-1.130505171,"1.05963E-11","8.08042E-11","down",-1.638867115,"4.49701E-14","3.90274E-13","down",-0.961124063,0.001194355,0.005053151,false,-0.36765144,0.139437693,0.297919958,false,-0.509474473,0.036299658,0.357372144,false,-0.447741911,0.085936417,0.206910693,false,0.150145638,0.444165211,0.718371621,false,"chr_0010",33763660,33767242,"+","--","--","--","--","uncharacterized protein LOC103945006 isoform X1 [Pyrus x bretschneideri]","--","A0A5N5GCF9_9ROSA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAB2611431.1};","--","--","--","--","--","--"]
["novel.959",9.2786,10.3308,7.9574,2.3914,2.6354,2.8999,2.246,2.9633,3.3825,5.2654,6.1057,4.0479,1.6932,2.6036,3.4459,419,465,352,79,104,110,77,95,138,193,236,185,60,92,122,-0.656910857,0.002460246,0.006320878,false,-1.546643866,"3.39349E-09","1.84022E-08","down",-1.58519304,"3.2144E-14","3.19573E-13","down",-1.403113223,"3.7891E-10","2.21074E-09","down",-0.733950232,0.004626445,0.016142831,false,0.159299389,0.609263726,0.765526161,false,0.181904665,0.470727169,0.842525058,false,-0.912986708,0.000210822,0.001698239,false,-0.014466139,0.961967862,0.988456551,false,"chr_0010",34485041,34487407,"-","--","--","K18875 enhanced disease susceptibility 1 protein | (RefSeq) protein EDS1-like (A)","ko04626: Plant-pathogen interaction","senescence-associated carboxylesterase 101-like [Pyrus x bretschneideri]","SG101_ARATH RecName: Full=Senescence-associated carboxylesterase 101; EC=3.1.1.1; Flags: Precursor;","A0A5N5F876_9ROSA SubName: Full=Senescence-associated carboxylesterase 101 {ECO:0000313|EMBL:KAB2598993.1};","--","GO:0005737,cytoplasm; GO:0106093,EDS1 disease-resistance complex; GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0052689,carboxylic ester hydrolase activity; GO:0080030,methyl indole-3-acetate esterase activity; GO:0007568,aging; GO:0050829,defense response to Gram-negative bacterium; GO:0060866,leaf abscission; GO:0016042,lipid catabolic process; GO:0009626,plant-type hypersensitive response; GO:1900426,positive regulation of defense response to bacterium; GO:1902290,positive regulation of defense response to oomycetes; GO:0002230,positive regulation of defense response to virus by host; GO:1900057,positive regulation of leaf senescence; GO:0009862,systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0008150,biological_process; GO:0032502,developmental process; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0042742,defense response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0007275,multicellular organism development; GO:0009838,abscission; GO:0032501,multicellular organismal process; GO:0048856,anatomical structure development; GO:0006629,lipid metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0009987,cellular process; GO:0012501,programmed cell death; GO:0033554,cellular response to stress; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0051716,cellular response to stimulus; GO:0002831,regulation of response to biotic stimulus; GO:0002833,positive regulation of response to biotic stimulus; GO:0031347,regulation of defense response; GO:0031349,positive regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0032103,positive regulation of response to external stimulus; GO:0048518,positive regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:1900424,regulation of defense response to bacterium; GO:0002229,defense response to oomycetes; GO:0002239,response to oomycetes; GO:1902288,regulation of defense response to oomycetes; GO:0009615,response to virus; GO:0050688,regulation of defense response to virus; GO:0050691,regulation of defense response to virus by host; GO:0051607,defense response to virus; GO:0140546,defense response to symbiont; GO:0010150,leaf senescence; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0050793,regulation of developmental process; GO:0051094,positive regulation of developmental process; GO:0090693,plant organ senescence; GO:0099402,plant organ development; GO:1900055,regulation of leaf senescence; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009627,systemic acquired resistance; GO:0009751,response to salicylic acid; GO:0009863,salicylic acid mediated signaling pathway; GO:0010033,response to organic substance; GO:0014070,response to organic cyclic compound; GO:0023052,signaling; GO:0042221,response to chemical; GO:0050794,regulation of cellular process; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071407,cellular response to organic cyclic compound; GO:0071446,cellular response to salicylic acid stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01764.28:Lipase (class 3)","--","--","--"]
["novel.960",3.0312,4.0185,2.7628,1.0359,0.8672,0.3866,0.2852,0.4575,0.1198,3.601,3.1619,2.0323,0.5518,0.8301,1.795,28,37,25,7,7,3,2,3,1,27,25,19,4,6,13,0.021032153,0.960773241,0.972388864,false,-1.341369548,0.018494469,0.032971458,"down",-1.890633766,0.001522158,0.003447047,"down",-3.276941089,"2.46266E-05","7.53824E-05","down",-3.286975308,"4.96517E-05",0.000308488,"down","NA","NA","NA","NA","NA","NA","NA","NA",-1.89728891,0.003108623,0.015724181,"down","NA","NA","NA","NA","chr_0010",34489707,34491299,"-","--","--","--","--","senescence-associated carboxylesterase 101-like isoform X1 [Malus sylvestris]","--","A0A498J1K4_MALDO RecName: Full=Peroxidase {ECO:0000256|ARBA:ARBA00012313}; EC=1.11.1.7 {ECO:0000256|ARBA:ARBA00012313};","--","GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0020037,heme binding; GO:0046872,metal ion binding; GO:0004601,peroxidase activity; GO:0042744,hydrogen peroxide catabolic process; GO:0006629,lipid metabolic process; GO:0006979,response to oxidative stress; GO:0003674,molecular_function; GO:0005488,binding; GO:0046906,tetrapyrrole binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0003824,catalytic activity; GO:0016209,antioxidant activity; GO:0016491,oxidoreductase activity; GO:0016684,oxidoreductase activity, acting on peroxide as acceptor; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009987,cellular process; GO:0042743,hydrogen peroxide metabolic process; GO:0044237,cellular metabolic process; GO:0044248,cellular catabolic process; GO:0072593,reactive oxygen species metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:0006950,response to stress; GO:0050896,response to stimulus; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","--","--","--","--"]
["novel.961",162.1055,162.9675,106.9463,33.1965,50.1971,45.8623,31.7562,41.5236,39.2031,68.0404,54.9597,38.9398,34.2905,44.7352,61.0878,18477,18515,11941,2768,5000,4391,2748,3360,4037,6295,5362,4492,3067,3990,5459,-1.225251748,"4.1329E-06","1.93093E-05","down",-1.341459807,"4.93154E-08","2.30772E-07","down",-1.528567565,"1.01733E-09","6.12286E-09","down",-1.663722886,"3.65559E-14","3.19676E-13","down",-0.42417555,0.085575943,0.175046463,false,-0.306365656,0.176084164,0.34918129,false,-0.137650763,0.537085506,0.869476923,false,-0.284977465,0.297771944,0.487212803,false,-0.161062521,0.533400972,0.781372032,false,"chr_0010",34507916,34527695,"-","--","--","K18875 enhanced disease susceptibility 1 protein | (RefSeq) protein EDS1L-like (A)","ko04626: Plant-pathogen interaction","senescence-associated carboxylesterase 101-like [Malus sylvestris]","SG101_ARATH RecName: Full=Senescence-associated carboxylesterase 101; EC=3.1.1.1; Flags: Precursor;","A0A498J2Q2_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89456.1};","--","GO:0005737,cytoplasm; GO:0106093,EDS1 disease-resistance complex; GO:0016021,integral component of membrane; GO:0005634,nucleus; GO:0052689,carboxylic ester hydrolase activity; GO:0080030,methyl indole-3-acetate esterase activity; GO:0007568,aging; GO:0050829,defense response to Gram-negative bacterium; GO:0060866,leaf abscission; GO:0016042,lipid catabolic process; GO:0009626,plant-type hypersensitive response; GO:1900426,positive regulation of defense response to bacterium; GO:1902290,positive regulation of defense response to oomycetes; GO:0002230,positive regulation of defense response to virus by host; GO:1900057,positive regulation of leaf senescence; GO:0009862,systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0008150,biological_process; GO:0032502,developmental process; GO:0006950,response to stress; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0042742,defense response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0007275,multicellular organism development; GO:0009838,abscission; GO:0032501,multicellular organismal process; GO:0048856,anatomical structure development; GO:0006629,lipid metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0009987,cellular process; GO:0012501,programmed cell death; GO:0033554,cellular response to stress; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0051716,cellular response to stimulus; GO:0002831,regulation of response to biotic stimulus; GO:0002833,positive regulation of response to biotic stimulus; GO:0031347,regulation of defense response; GO:0031349,positive regulation of defense response; GO:0032101,regulation of response to external stimulus; GO:0032103,positive regulation of response to external stimulus; GO:0048518,positive regulation of biological process; GO:0048583,regulation of response to stimulus; GO:0048584,positive regulation of response to stimulus; GO:0050789,regulation of biological process; GO:0065007,biological regulation; GO:0080134,regulation of response to stress; GO:1900424,regulation of defense response to bacterium; GO:0002229,defense response to oomycetes; GO:0002239,response to oomycetes; GO:1902288,regulation of defense response to oomycetes; GO:0009615,response to virus; GO:0050688,regulation of defense response to virus; GO:0050691,regulation of defense response to virus by host; GO:0051607,defense response to virus; GO:0140546,defense response to symbiont; GO:0010150,leaf senescence; GO:0048366,leaf development; GO:0048367,shoot system development; GO:0048731,system development; GO:0048827,phyllome development; GO:0050793,regulation of developmental process; GO:0051094,positive regulation of developmental process; GO:0090693,plant organ senescence; GO:0099402,plant organ development; GO:1900055,regulation of leaf senescence; GO:0007154,cell communication; GO:0007165,signal transduction; GO:0009627,systemic acquired resistance; GO:0009751,response to salicylic acid; GO:0009863,salicylic acid mediated signaling pathway; GO:0010033,response to organic substance; GO:0014070,response to organic cyclic compound; GO:0023052,signaling; GO:0042221,response to chemical; GO:0050794,regulation of cellular process; GO:0070887,cellular response to chemical stimulus; GO:0071310,cellular response to organic substance; GO:0071407,cellular response to organic cyclic compound; GO:0071446,cellular response to salicylic acid stimulus; GO:1901700,response to oxygen-containing compound; GO:1901701,cellular response to oxygen-containing compound; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0032991,protein-containing complex; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF18117.4:Enhanced disease susceptibility 1 protein EP domain","--","--","--"]
["novel.963",13.1969,16.7074,10.5122,3.4557,4.2656,2.9415,2.8219,5.0094,4.2683,3.7479,3.9546,3.9937,3.6038,2.2815,4.2628,924,1166,721,177,261,173,150,249,270,213,237,283,198,125,234,-1.605633393,"3.7854E-14","5.16446E-13","down",-1.704012739,"2.46023E-10","1.52985E-09","down",-1.702561197,"9.40577E-11","6.43603E-10","down",-1.462000207,"6.78064E-08","2.99116E-07","down",0.158054659,0.521836948,0.663591205,false,0.25959868,0.394464646,0.590055143,false,0.23908422,0.420059722,0.814714319,false,-0.078106849,0.734518127,0.85046156,false,0.028534154,0.92435187,0.975369869,false,"chr_0010",34625252,34629296,"+","--","--","K25897 protease Do-like 9 [EC:3.4.21.-] | (RefSeq) protease Do-like 9 (A)","--","protease Do-like 9 [Malus domestica]","DEGP9_ARATH RecName: Full=Protease Do-like 9; EC=3.4.21.-;","A0A5N5HHW7_9ROSA SubName: Full=Protease Do-like 9 {ECO:0000313|EMBL:KAB2627586.1};","Serine protease","GO:0005730,nucleolus; GO:0005634,nucleus; GO:0004252,serine-type endopeptidase activity; GO:0008236,serine-type peptidase activity; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0017171,serine hydrolase activity; GO:0140096,catalytic activity, acting on a protein; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0019538,protein metabolic process; GO:0043170,macromolecule metabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901564,organonitrogen compound metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0031974,membrane-enclosed lumen; GO:0031981,nuclear lumen; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043228,non-membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0043232,intracellular non-membrane-bounded organelle; GO:0043233,organelle lumen; GO:0070013,intracellular organelle lumen; GO:0110165,cellular anatomical entity","PF17815.4:PDZ domain","--","--","--"]
["novel.964",20.4138,25.5134,15.7366,20.2493,9.561,18.6341,13.5525,18.4762,30.8945,8.3607,14.1306,9.5534,9.1133,8.6493,8.8653,1119,1394,845,812,458,858,564,719,1530,372,663,530,392,371,381,-0.770171486,0.002201838,0.005714608,false,-0.922263908,"8.93579E-06","3.02888E-05",false,-0.147704626,0.631101999,0.697126058,false,0.293747253,0.33092625,0.411703087,false,1.078783871,0.000584596,0.002719624,"up",1.236395575,"7.53327E-06",0.000105856,"up",0.447458112,0.200452156,0.657788358,false,0.635545035,0.039208624,0.114933416,false,0.797345998,0.003009235,0.030294148,false,"chr_0010",34628480,34632051,"-","--","--","--","--","WAT1-related protein At3g28050-like [Malus domestica]","WTR18_ARATH RecName: Full=WAT1-related protein At3g28050;","A0A498J498_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89447.1};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0022857,transmembrane transporter activity; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00892.23:EamA-like transporter family","--","--","--"]
["novel.966",1.2314,1.6987,1.8542,0.2104,0.2114,0.3665,0.1217,0.0867,0.1704,0.4172,1.5466,0.5171,0.3139,0.2361,0.3141,40,55,59,5,6,10,3,2,5,11,43,17,8,6,8,-0.780494423,0.130323432,0.199305891,false,-2.173020844,"4.52077E-06","1.59974E-05","down",-2.384252178,"1.55239E-06","5.94569E-06","down",-3.350659833,"3.47618E-08","1.59298E-07","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",34644658,34646770,"-","--","--","--","--","WAT1-related protein At5g40240-like [Malus domestica]","WTR42_ARATH RecName: Full=WAT1-related protein At5g40240;","A0A540L4J8_MALBA RecName: Full=WAT1-related protein {ECO:0000256|RuleBase:RU363077};","--","GO:0016021,integral component of membrane; GO:0005886,plasma membrane; GO:0022857,transmembrane transporter activity; GO:0003674,molecular_function; GO:0005215,transporter activity; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity; GO:0071944,cell periphery","PF00892.23:EamA-like transporter family","--","--","--"]
["novel.968",0.7138,0.8137,1.0267,1.9071,1.5964,1.854,1.2393,0.8683,0.9337,0.8794,1.2887,1.5067,1.9432,1.2853,0.9104,22,25,31,43,43,48,29,19,26,22,34,47,47,31,22,0.715686351,0.066566642,0.112909588,false,0.997699827,0.018693345,0.033285809,false,1.282843904,0.000221241,0.000587701,"up",0.538411116,0.190987813,0.257752107,false,-0.164954968,0.684012663,0.792707915,false,-0.443874111,0.310910637,0.507181683,false,-0.748138039,0.035423676,0.354057006,false,0.583331627,0.096063241,0.224181784,false,0.312268275,0.418402978,0.697581578,false,"chr_0010",34878954,34880271,"+","--","--","--","--","hypothetical protein DVH24_034006 [Malus domestica]","--","A0A498KML4_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXI09389.1};","--","--","--","--","--","--"]
["novel.97",0.0284,0.1994,0.058,22.4732,36.8453,20.4169,33.473,42.9156,39.0969,19.3794,7.4306,10.9416,29.1284,33.9273,35.3469,1,7,2,579,1134,604,895,1073,1244,554,224,390,805,935,976,7.249995021,"6.48873E-32","3.5774E-30","up",8.716296365,"1.62618E-72","2.63915E-70","up",8.350051825,"1.97483E-49","1.84396E-47","up",8.939993765,"6.36444E-73","9.7599E-71","up",1.706301962,"8.13705E-07","7.66891E-06","up",0.238957216,0.139188448,0.297525253,false,0.584622295,0.042452829,0.378526071,false,1.123014685,0.005195464,0.023764687,"up",-0.337615318,0.218927121,0.502003801,false,"chr_001",6173907,6176382,"-","--","--","--","--","patatin-like protein 2 [Malus domestica]","PLP2_ARATH RecName: Full=Patatin-like protein 2; Short=AtPLP2; EC=3.1.1.-; AltName: Full=Patatin-related phospholipase A IIalpha; Short=pPLAIIa; AltName: Full=Phospholipase A IIA; Short=AtPLAIIA;","A0A498HT50_MALDO RecName: Full=Patatin {ECO:0000256|RuleBase:RU361262}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361262};","Ca2+-independent phospholipase A2","GO:0005737,cytoplasm; GO:0016020,membrane; GO:0005777,peroxisome; GO:0047372,acylglycerol lipase activity; GO:0042802,identical protein binding; GO:0016298,lipase activity; GO:0004620,phospholipase activity; GO:0071456,cellular response to hypoxia; GO:0051607,defense response to virus; GO:0016042,lipid catabolic process; GO:0006629,lipid metabolic process; GO:0031408,oxylipin biosynthetic process; GO:0009626,plant-type hypersensitive response; GO:0046686,response to cadmium ion; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0052689,carboxylic ester hydrolase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009615,response to virus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0140546,defense response to symbiont; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0006082,organic acid metabolic process; GO:0009058,biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0031407,oxylipin metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0012501,programmed cell death; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0042579,microbody; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01734.25:Patatin-like phospholipase","--","--","--"]
["novel.971",0,0.0278,0.085,5.9933,4.4772,2.1803,10.6362,16.3386,11.5794,0.8205,2.5287,0.8774,7.7444,2.5887,2.5483,0,1,3,158,141,66,291,418,377,24,78,32,219,73,72,5.407794787,"7.28726E-09","5.26518E-08","up",7.155250229,"3.08028E-16","3.42424E-15","up",7.050397621,"2.03668E-16","2.49854E-15","up",8.716511739,"7.5505E-30","1.87973E-28","up",3.318886817,"1.27479E-15","4.34191E-14","up",1.579954118,0.000201928,0.001753912,"up",1.66677296,"1.39529E-05",0.003747741,"up",1.655222344,0.001864015,0.010416102,"up",-0.076153527,0.883430319,0.957492828,false,"chr_0010",35057491,35059031,".","--","--","--","--","hypothetical protein C1H46_013550 [Malus baccata]","--","A0A540MR52_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQE00840.1};","--","--","--","--","--","--"]
["novel.973",2.5047,1.5123,1.157,3.7802,14.3178,4.0477,9.8825,14.7512,9.3082,6.5904,1.4962,2.3516,11.8722,4.0119,6.852,221,133,100,244,1104,300,662,924,742,472,113,210,822,277,474,1.22450961,0.019538409,0.039349794,"up",2.430289327,"1.19517E-09","6.88511E-09","up",2.334938785,"1.11551E-05","3.7191E-05","up",2.9968926,"2.26661E-20","3.17263E-19","up",1.789707489,0.000268066,0.001375483,"up",0.582089077,0.116015308,0.262638385,false,0.651750182,0.19664618,0.654127268,false,1.136306448,0.20751903,0.381753788,false,-0.062243122,0.936882579,0.980102069,false,"chr_0010",35135782,35139554,".","--","--","K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1-like (A)","ko04626: Plant-pathogen interaction","hypothetical protein F3Y22_tig00001120pilonHSYRG00173 [Hibiscus syriacus]","POLR1_ARATH RecName: Full=Retrovirus-related Pol polyprotein from transposon RE1; AltName: Full=Retro element 1 {ECO:0000303|PubMed:10689195}; Short=AtRE1 {ECO:0000303|PubMed:10689195}; Includes: RecName: Full=Protease RE1; EC=3.4.23.-; Includes: RecName: Full=Reverse transcriptase RE1; EC=2.7.7.49; Includes: RecName: Full=Endonuclease RE1;","A0A6A3AKC8_HIBSY SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KAE8704478.1};","FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations","GO:0004190,aspartic-type endopeptidase activity; GO:0004519,endonuclease activity; GO:0046872,metal ion binding; GO:0003676,nucleic acid binding; GO:0003964,RNA-directed DNA polymerase activity; GO:0015074,DNA integration; GO:0006310,DNA recombination; GO:0006508,proteolysis; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0004175,endopeptidase activity; GO:0008233,peptidase activity; GO:0016787,hydrolase activity; GO:0070001,aspartic-type peptidase activity; GO:0140096,catalytic activity, acting on a protein; GO:0004518,nuclease activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0005488,binding; GO:0043167,ion binding; GO:0043169,cation binding; GO:0097159,organic cyclic compound binding; GO:1901363,heterocyclic compound binding; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016779,nucleotidyltransferase activity; GO:0034061,DNA polymerase activity; GO:0140097,catalytic activity, acting on DNA; GO:0140640,catalytic activity, acting on a nucleic acid; GO:0006139,nucleobase-containing compound metabolic process; GO:0006259,DNA metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0034641,cellular nitrogen compound metabolic process; GO:0043170,macromolecule metabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044260,cellular macromolecule metabolic process; GO:0046483,heterocycle metabolic process; GO:0071704,organic substance metabolic process; GO:0090304,nucleic acid metabolic process; GO:1901360,organic cyclic compound metabolic process; GO:0019538,protein metabolic process; GO:1901564,organonitrogen compound metabolic process","PF07727.17:Reverse transcriptase (RNA-dependent DNA polymerase)","--","--","--"]
["novel.974",2.0633,2.7248,2.2998,1.439,0.8432,1.4036,1.1093,0.3855,0.6525,0.9079,1.1315,1.2482,0.483,1.2915,1.1279,98,129,107,50,35,56,40,13,28,35,46,60,18,48,42,-0.919474235,0.000585528,0.001754683,false,-1.001902743,0.005089252,0.010344864,"down",-0.740237568,0.014144665,0.026011792,false,-1.436989948,0.000223907,0.000582123,"down",-0.502082714,0.259336486,0.404808892,false,-0.42106924,0.41886784,0.612081291,false,-0.700813754,0.127634959,0.575891073,false,0.198200201,0.563178488,0.731693511,false,0.286477829,0.509675301,0.764664681,false,"chr_0010",35149488,35151518,"-","--","--","K06158 ATP-binding cassette, subfamily F, member 3 | (RefSeq) ABC transporter F family member 3-like (A)","--","hypothetical protein C1H46_003007 [Malus baccata]","AB3F_ARATH RecName: Full=ABC transporter F family member 3; Short=ABC transporter ABCF.3; Short=AtABCF3; AltName: Full=GCN20-type ATP-binding cassette protein GCN3;","A0A540NK72_MALBA RecName: Full=KH_dom_type_1 domain-containing protein {ECO:0000259|Pfam:PF00013};","ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b","GO:0005634,nucleus; GO:0005524,ATP binding; GO:0042742,defense response to bacterium; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009617,response to bacterium; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle; GO:0110165,cellular anatomical entity","--","--","--","--"]
["novel.976",9.9394,10.3883,9.5233,2.8709,4.8904,2.5875,3.474,3.4056,2.8923,4.9643,3.9087,3.1851,3.4234,3.6826,4.7969,407,424,382,86,175,89,108,99,107,165,137,132,110,118,154,-1.119987081,"4.29481E-07","2.36607E-06","down",-1.036579413,"3.46651E-08","1.65493E-07","down",-1.299042382,"1.03344E-05","3.46841E-05","down",-1.330380686,"5.62832E-12","3.95752E-11","down",-0.196539914,0.467588177,0.61609302,false,-0.277149891,0.24660236,0.437450457,false,-0.033709948,0.920539237,0.981075572,false,-0.163059606,0.646801918,0.79141233,false,-0.234272429,0.480070609,0.743535424,false,"chr_0010",35373370,35376502,"+","--","--","K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1] | (RefSeq) proteasome subunit alpha type-7-like (A)","ko03050: Proteasome","altered inheritance of mitochondria protein 32-like [Malus domestica]","--","A0A498J6F8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89373.1};","--","--","PF06999.15:Sucrase/ferredoxin-like","--","--","--"]
["novel.977",12.19,14.5903,9.251,1.6156,2.905,2.1041,1.4109,2.1376,1.7113,4.2537,3.8419,4.1771,2.3297,2.5781,3.188,3414,4073,2538,331,711,495,300,425,433,967,921,1184,512,565,700,-1.367852768,"2.18673E-11","2.21377E-10","down",-1.867624362,"8.45461E-19","1.16967E-17","down",-2.224293465,"4.25904E-15","4.61476E-14","down",-2.496129648,"4.77013E-25","8.95905E-24","down",-1.114212544,"4.10501E-08","5.024E-07","down",-0.612902843,0.00460464,0.022971734,false,-0.275316086,0.34917576,0.777718052,false,-0.836144742,0.001134351,0.006918959,false,-0.328876538,0.218441597,0.501321421,false,"chr_0010",35398321,35715581,"+","--","--","K13459 disease resistance protein RPS2 | (RefSeq) disease resistance protein At4g27190-like (A)","ko04626: Plant-pathogen interaction","TMV resistance protein N-like isoform X2 [Malus sylvestris]","ROQ1_NICBE RecName: Full=Disease resistance protein Roq1 {ECO:0000305}; AltName: Full=NAD(+) hydrolase RPV1; EC=3.2.2.6 {ECO:0000305|PubMed:31439792}; AltName: Full=Recognition of XopQ 1 protein {ECO:0000303|PubMed:28891100};","A0A5N5GER3_9ROSA SubName: Full=TMV resistance protein N-like {ECO:0000313|EMBL:KAB2613989.1};","--","GO:0043531,ADP binding; GO:0050135,NAD(P)+ nucleosidase activity; GO:0061809,NAD+ nucleotidase, cyclic ADP-ribose generating; GO:0006952,defense response; GO:0007165,signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016799,hydrolase activity, hydrolyzing N-glycosyl compounds; GO:0003953,NAD+ nucleosidase activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0007154,cell communication; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation","PF01582.23:TIR domain","--","--","--"]
["novel.978",0.4845,0.6887,0.4122,1.1591,0.6931,1.0095,0.7978,0.2844,0.8492,1.0944,1.7926,0.6384,1.0806,1.3417,0.824,12,17,10,21,15,21,15,5,19,22,38,16,21,26,16,1.323799312,0.016469795,0.033923393,"up",1.323992127,0.007509315,0.014693781,"up",1.054124384,0.041995854,0.068451816,false,"NA","NA","NA","NA",-0.746184727,0.223972339,0.363738967,false,-0.736132822,0.179830858,0.354095583,false,-0.484436273,0.39095121,0.801641358,false,-0.256409114,0.630975122,0.779777571,false,-0.245926536,0.593359572,0.816985774,false,"chr_0010",35392333,35393391,"-","--","--","--","--","hypothetical protein DVH24_039986 [Malus domestica]","--","A0A498I7G8_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH78015.1};","--","--","--","--","--","--"]
["novel.979",1.7513,1.3387,0.8513,0.171,0.2624,0.4468,0.1648,0.8223,0.4154,0.3596,0.5115,0.3708,0.1594,0.3197,0.5319,84,64,40,6,11,18,6,28,18,14,21,18,6,12,20,-1.491578087,0.000475084,0.001457407,"down",-1.683277021,0.000800494,0.001922291,"down",-1.953497349,0.000110937,0.000311498,"down",-1.218839665,0.029884382,0.050887777,false,0.287691622,0.651402744,0.768186394,false,0.48456104,0.494070145,0.677623191,false,"NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",35445616,35448773,"+","--","--","K13459 disease resistance protein RPS2 | (RefSeq) disease resistance protein At4g27190-like (A)","ko04626: Plant-pathogen interaction","disease resistance protein RPV1-like isoform X3 [Malus sylvestris]","ROQ1_NICBE RecName: Full=Disease resistance protein Roq1 {ECO:0000305}; AltName: Full=NAD(+) hydrolase RPV1; EC=3.2.2.6 {ECO:0000305|PubMed:31439792}; AltName: Full=Recognition of XopQ 1 protein {ECO:0000303|PubMed:28891100};","A0A5N5GER3_9ROSA SubName: Full=TMV resistance protein N-like {ECO:0000313|EMBL:KAB2613989.1};","--","GO:0043531,ADP binding; GO:0050135,NAD(P)+ nucleosidase activity; GO:0061809,NAD+ nucleotidase, cyclic ADP-ribose generating; GO:0006952,defense response; GO:0007165,signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016799,hydrolase activity, hydrolyzing N-glycosyl compounds; GO:0003953,NAD+ nucleosidase activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0007154,cell communication; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation","PF01582.23:TIR domain","--","--","--"]
["novel.98",1.3683,0.5597,0.4068,5.0663,5.442,2.989,15.2928,2.8068,3.2642,4.4024,6.5338,2.9533,1.9976,7.6563,5.3711,103,42,30,279,358,189,874,150,222,269,421,225,118,451,317,2.744125043,"1.27364E-09","1.02386E-08","up",2.957827775,"4.56103E-05",0.000137147,"up",2.749809801,"2.81926E-09","1.60134E-08","up",3.483116017,0.000184247,0.000486324,"up",0.744826356,0.371100404,0.524721847,false,0.531875364,0.560478729,0.730713647,false,0.720826427,0.381938315,0.797825647,false,0.020919736,0.953905555,0.976893719,false,-0.184723072,0.67654557,0.863692434,false,"chr_001",6139275,6154800,"-","--","--","--","--","patatin-like protein 2 isoform X1 [Malus sylvestris]","PLP2_ARATH RecName: Full=Patatin-like protein 2; Short=AtPLP2; EC=3.1.1.-; AltName: Full=Patatin-related phospholipase A IIalpha; Short=pPLAIIa; AltName: Full=Phospholipase A IIA; Short=AtPLAIIA;","A0A5N5GUS9_9ROSA RecName: Full=Patatin {ECO:0000256|RuleBase:RU361262}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361262};","Ca2+-independent phospholipase A2","GO:0005737,cytoplasm; GO:0016020,membrane; GO:0005777,peroxisome; GO:0047372,acylglycerol lipase activity; GO:0042802,identical protein binding; GO:0016298,lipase activity; GO:0004620,phospholipase activity; GO:0071456,cellular response to hypoxia; GO:0051607,defense response to virus; GO:0016042,lipid catabolic process; GO:0006629,lipid metabolic process; GO:0031408,oxylipin biosynthetic process; GO:0009626,plant-type hypersensitive response; GO:0046686,response to cadmium ion; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0052689,carboxylic ester hydrolase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009615,response to virus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0140546,defense response to symbiont; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0006082,organic acid metabolic process; GO:0009058,biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0031407,oxylipin metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0012501,programmed cell death; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0042579,microbody; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01734.25:Patatin-like phospholipase","--","--","--"]
["novel.985",1.2482,2.3189,1.7933,0.8531,0.529,1.0732,1.0656,0.7163,1.049,0.9682,0.9451,0.5024,0.6775,0.7089,0.3243,54,100,76,27,20,39,35,22,41,34,35,22,23,24,11,-0.969041313,0.014719905,0.030762935,false,-1.35174331,0.001215649,0.002811135,"down",-0.923914968,0.01978437,0.03508766,false,-0.636172744,0.079572745,0.121188142,false,0.343936807,0.418224176,0.570088581,false,0.730683137,0.105486583,0.245511371,false,0.287174685,0.480889193,0.847619073,false,0.05738076,0.901516162,0.948354244,false,0.452458923,0.351721517,0.640009596,false,"chr_0010",35548776,35550939,"-","--","--","--","--","TMV resistance protein N-like [Malus domestica]","RUN1_VITRO RecName: Full=Disease resistance protein RUN1 {ECO:0000305}; AltName: Full=NAD(+) hydrolase RUN1; EC=3.2.2.6 {ECO:0000269|PubMed:31439792}; AltName: Full=NADP(+) hydrolase RUN1 {ECO:0000305}; EC=3.2.2.- {ECO:0000269|PubMed:31439792}; AltName: Full=Resistance to Uncinula necator protein {ECO:0000303|PubMed:24033846}; Short=MrRUN1 {ECO:0000303|PubMed:24033846};","A0A540MW73_MALBA RecName: Full=TIR domain-containing protein {ECO:0000259|PROSITE:PS50104};","--","GO:0005737,cytoplasm; GO:0005634,nucleus; GO:0043531,ADP binding; GO:0050135,NAD(P)+ nucleosidase activity; GO:0003953,NAD+ nucleosidase activity; GO:0061809,NAD+ nucleotidase, cyclic ADP-ribose generating; GO:0050832,defense response to fungus; GO:0019677,NAD catabolic process; GO:0043068,positive regulation of programmed cell death; GO:0007165,signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016799,hydrolase activity, hydrolyzing N-glycosyl compounds; GO:0006950,response to stress; GO:0006952,defense response; GO:0008150,biological_process; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009620,response to fungus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0050896,response to stimulus; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0006139,nucleobase-containing compound metabolic process; GO:0006725,cellular aromatic compound metabolic process; GO:0006753,nucleoside phosphate metabolic process; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0006807,nitrogen compound metabolic process; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0009117,nucleotide metabolic process; GO:0009166,nucleotide catabolic process; GO:0009987,cellular process; GO:0019362,pyridine nucleotide metabolic process; GO:0019364,pyridine nucleotide catabolic process; GO:0019439,aromatic compound catabolic process; GO:0019637,organophosphate metabolic process; GO:0034641,cellular nitrogen compound metabolic process; GO:0034655,nucleobase-containing compound catabolic process; GO:0044237,cellular metabolic process; GO:0044238,primary metabolic process; GO:0044248,cellular catabolic process; GO:0044270,cellular nitrogen compound catabolic process; GO:0044281,small molecule metabolic process; GO:0046434,organophosphate catabolic process; GO:0046483,heterocycle metabolic process; GO:0046496,nicotinamide nucleotide metabolic process; GO:0046700,heterocycle catabolic process; GO:0055086,nucleobase-containing small molecule metabolic process; GO:0071704,organic substance metabolic process; GO:0072524,pyridine-containing compound metabolic process; GO:0072526,pyridine-containing compound catabolic process; GO:1901292,nucleoside phosphate catabolic process; GO:1901360,organic cyclic compound metabolic process; GO:1901361,organic cyclic compound catabolic process; GO:1901564,organonitrogen compound metabolic process; GO:1901565,organonitrogen compound catabolic process; GO:1901575,organic substance catabolic process; GO:0008219,cell death; GO:0010941,regulation of cell death; GO:0010942,positive regulation of cell death; GO:0012501,programmed cell death; GO:0043067,regulation of programmed cell death; GO:0048518,positive regulation of biological process; GO:0048522,positive regulation of cellular process; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0065007,biological regulation; GO:0007154,cell communication; GO:0023052,signaling; GO:0051716,cellular response to stimulus; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01582.23:TIR domain","--","--","--"]
["novel.986",1.5724,1.4868,1.3743,0.7887,0.8932,0.9562,0.4619,0.478,0.3506,0.5853,0.6476,0.4583,0.4757,0.5927,0.5772,139,131,119,51,69,71,31,30,28,42,49,41,33,41,40,-1.212333865,"2.94702E-06","1.41307E-05","down",-1.140009943,"9.46319E-06","3.19221E-05","down",-0.533913307,0.024296215,0.04215571,false,-1.505592863,"2.14155E-07","8.83892E-07","down",-0.2805007,0.438534345,0.589318128,false,-0.347717339,0.327269659,0.524088313,false,-0.97174719,0.002751589,0.101467933,false,0.692741618,0.023254051,0.077305625,false,0.631218273,0.032153826,0.160035868,false,"chr_0010",35552298,35564436,"+","--","--","K13459 disease resistance protein RPS2 | (RefSeq) disease resistance protein At4g27190-like (A)","ko04626: Plant-pathogen interaction","TMV resistance protein N-like isoform X1 [Malus sylvestris]","ROQ1_NICBE RecName: Full=Disease resistance protein Roq1 {ECO:0000305}; AltName: Full=NAD(+) hydrolase RPV1; EC=3.2.2.6 {ECO:0000305|PubMed:31439792}; AltName: Full=Recognition of XopQ 1 protein {ECO:0000303|PubMed:28891100};","A0A5N5GER3_9ROSA SubName: Full=TMV resistance protein N-like {ECO:0000313|EMBL:KAB2613989.1};","--","GO:0043531,ADP binding; GO:0050135,NAD(P)+ nucleosidase activity; GO:0061809,NAD+ nucleotidase, cyclic ADP-ribose generating; GO:0006952,defense response; GO:0007165,signal transduction; GO:0000166,nucleotide binding; GO:0003674,molecular_function; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016798,hydrolase activity, acting on glycosyl bonds; GO:0016799,hydrolase activity, hydrolyzing N-glycosyl compounds; GO:0003953,NAD+ nucleosidase activity; GO:0006950,response to stress; GO:0008150,biological_process; GO:0050896,response to stimulus; GO:0007154,cell communication; GO:0009987,cellular process; GO:0023052,signaling; GO:0050789,regulation of biological process; GO:0050794,regulation of cellular process; GO:0051716,cellular response to stimulus; GO:0065007,biological regulation","PF00931.25:NB-ARC domain","--","--","--"]
["novel.988",0.896,1.1985,0.5266,0,0.0621,0.0646,0.0358,0.0382,0.0301,0.0334,0.0634,0.5365,0.0692,0.2776,0,33,44,19,0,2,2,1,1,1,1,2,20,2,8,0,-1.844794444,0.033277763,0.062212385,false,-2.635189524,0.001264001,0.00291405,"down",-4.106827091,"1.02364E-05","3.43824E-05","down",-4.394356571,"1.21473E-05","3.91489E-05","down","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","NA","chr_0010",35656858,35662017,"+","--","--","--","--","TMV resistance protein N-like isoform X2 [Malus sylvestris]","--","A0A540MH13_MALBA SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:TQD98048.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF06999.15:Sucrase/ferredoxin-like","--","--","--"]
["novel.99",0.1697,0.1702,0.4619,89.8454,65.793,41.4125,199.7058,220.1006,172.2328,7.1078,1.586,4.471,47.826,47.9241,44.4773,6,6,16,2324,2033,1230,5361,5525,5502,204,48,160,1327,1326,1233,4.258944481,"3.23143E-12","3.58454E-11","up",7.750800371,"7.1282E-135","6.7918E-132","up",8.17563496,"7.78418E-76","2.10781E-73","up",9.825136682,"2.0256E-182","2.3178E-179","up",5.585065239,"2.20002E-38","4.84448E-36","up",2.087276385,"1.75385E-38","1.79757E-35","up",1.647792395,"5.09812E-08","5.62343E-05","up",3.940574566,"4.63923E-16","4.44912E-14","up",0.448147305,0.117158766,0.354597802,false,"chr_001",6187546,6190082,"-","--","--","--","--","hypothetical protein DVH24_012428 [Malus domestica]","PLP2_ARATH RecName: Full=Patatin-like protein 2; Short=AtPLP2; EC=3.1.1.-; AltName: Full=Patatin-related phospholipase A IIalpha; Short=pPLAIIa; AltName: Full=Phospholipase A IIA; Short=AtPLAIIA;","A0A498HR33_MALDO RecName: Full=Patatin {ECO:0000256|RuleBase:RU361262}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361262};","Ca2+-independent phospholipase A2","GO:0005737,cytoplasm; GO:0016020,membrane; GO:0005777,peroxisome; GO:0047372,acylglycerol lipase activity; GO:0042802,identical protein binding; GO:0016298,lipase activity; GO:0004620,phospholipase activity; GO:0071456,cellular response to hypoxia; GO:0051607,defense response to virus; GO:0016042,lipid catabolic process; GO:0006629,lipid metabolic process; GO:0031408,oxylipin biosynthetic process; GO:0009626,plant-type hypersensitive response; GO:0046686,response to cadmium ion; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016787,hydrolase activity; GO:0016788,hydrolase activity, acting on ester bonds; GO:0052689,carboxylic ester hydrolase activity; GO:0005488,binding; GO:0005515,protein binding; GO:0001666,response to hypoxia; GO:0006950,response to stress; GO:0008150,biological_process; GO:0009628,response to abiotic stimulus; GO:0009987,cellular process; GO:0033554,cellular response to stress; GO:0036293,response to decreased oxygen levels; GO:0036294,cellular response to decreased oxygen levels; GO:0042221,response to chemical; GO:0050896,response to stimulus; GO:0051716,cellular response to stimulus; GO:0070482,response to oxygen levels; GO:0070887,cellular response to chemical stimulus; GO:0071453,cellular response to oxygen levels; GO:0006952,defense response; GO:0009605,response to external stimulus; GO:0009607,response to biotic stimulus; GO:0009615,response to virus; GO:0043207,response to external biotic stimulus; GO:0044419,biological process involved in interspecies interaction between organisms; GO:0051707,response to other organism; GO:0098542,defense response to other organism; GO:0140546,defense response to symbiont; GO:0008152,metabolic process; GO:0009056,catabolic process; GO:0044238,primary metabolic process; GO:0071704,organic substance metabolic process; GO:1901575,organic substance catabolic process; GO:0006082,organic acid metabolic process; GO:0009058,biosynthetic process; GO:0016053,organic acid biosynthetic process; GO:0019752,carboxylic acid metabolic process; GO:0031407,oxylipin metabolic process; GO:0043436,oxoacid metabolic process; GO:0044237,cellular metabolic process; GO:0044249,cellular biosynthetic process; GO:0044281,small molecule metabolic process; GO:0044283,small molecule biosynthetic process; GO:0046394,carboxylic acid biosynthetic process; GO:1901576,organic substance biosynthetic process; GO:0002376,immune system process; GO:0006955,immune response; GO:0008219,cell death; GO:0012501,programmed cell death; GO:0034050,programmed cell death induced by symbiont; GO:0044403,biological process involved in symbiotic interaction; GO:0045087,innate immune response; GO:0051702,biological process involved in interaction with symbiont; GO:0010035,response to inorganic substance; GO:0010038,response to metal ion; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0042579,microbody; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF01734.25:Patatin-like phospholipase","--","--","--"]
["novel.992",1.6377,1.5821,1.6718,0.4146,0.4859,0.8304,0.3196,0.299,0.2685,0.8593,0.7795,0.4794,0.5024,1.0077,0.6963,54,52,54,10,14,23,8,7,8,23,22,16,13,26,18,-1.031696236,0.005702953,0.013381606,"down",-0.859045806,0.023386844,0.040655476,false,-1.284498187,0.00144317,0.003284152,"down",-2.186761285,"1.37515E-06","5.08333E-06","down",-1.146739369,0.046768988,0.108814798,false,"NA","NA","NA","NA","NA","NA","NA","NA",-0.248345749,0.641464547,0.787529371,false,-0.404014523,0.44182227,0.71624925,false,"chr_0010",35798424,35800988,"+","--","--","K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1] | (RefSeq) uncharacterized protein LOC103435646 (A)","ko03050: Proteasome","hypothetical protein DVH24_031707 [Malus domestica]","--","A0A498J1J0_MALDO SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RXH89350.1};","--","GO:0016021,integral component of membrane; GO:0005575,cellular_component; GO:0016020,membrane; GO:0031224,intrinsic component of membrane; GO:0110165,cellular anatomical entity","PF06999.15:Sucrase/ferredoxin-like","--","--","--"]
["novel.999",5.8511,5.6901,6.4036,0.5888,0.7188,0.5876,0.3073,0.4677,0.6059,1.9901,3.1453,1.8621,1.6926,1.5712,1.5681,652,632,699,48,70,55,26,37,61,180,300,210,148,137,137,-1.179301762,"4.3047E-08","2.78294E-07","down",-1.598873077,"1.36527E-25","3.03888E-24","down",-3.021460902,"5.2385E-52","5.30728E-50","down",-3.410939974,"5.21151E-48","2.99888E-46","down",-2.225577857,"1.48465E-11","3.16139E-10","down",-1.798162017,"2.9028E-10","1.16083E-08","down",-0.396466942,0.265487873,0.717613565,false,-1.827428108,"7.50487E-10","2.56059E-08","down",-1.396405696,"8.62658E-09","7.9439E-07","down","chr_0010",36380818,36392536,"+","--","--","K00939 adenylate kinase [EC:2.7.4.3] | (RefSeq) probable adenylate kinase 7, mitochondrial (A)","ko00230: Purine metabolism; ko00730: Thiamine metabolism; ko01100: Metabolic pathways; ko01110: Biosynthesis of secondary metabolites; ko01232: Nucleotide metabolism; ko01240: Biosynthesis of cofactors","hypothetical protein DVH24_031634 [Malus domestica]","KAD7_ARATH RecName: Full=Probable adenylate kinase 7, mitochondrial; EC=2.7.4.3 {ECO:0000250|UniProtKB:P69441}; AltName: Full=ATP-AMP transphosphorylase 7; AltName: Full=ATP:AMP phosphotransferase; AltName: Full=Adenylate monophosphate kinase 7; Short=AMK7; Flags: Precursor;","A0A498J3T4_MALDO RecName: Full=C2 NT-type domain-containing protein {ECO:0000259|PROSITE:PS51840};","--","GO:0005737,cytoplasm; GO:0005739,mitochondrion; GO:0004017,adenylate kinase activity; GO:0005524,ATP binding; GO:0016310,phosphorylation; GO:0003674,molecular_function; GO:0003824,catalytic activity; GO:0016301,kinase activity; GO:0016740,transferase activity; GO:0016772,transferase activity, transferring phosphorus-containing groups; GO:0016776,phosphotransferase activity, phosphate group as acceptor; GO:0019205,nucleobase-containing compound kinase activity; GO:0050145,nucleoside monophosphate kinase activity; GO:0000166,nucleotide binding; GO:0005488,binding; GO:0017076,purine nucleotide binding; GO:0030554,adenyl nucleotide binding; GO:0032553,ribonucleotide binding; GO:0032555,purine ribonucleotide binding; GO:0032559,adenyl ribonucleotide binding; GO:0035639,purine ribonucleoside triphosphate binding; GO:0036094,small molecule binding; GO:0043167,ion binding; GO:0043168,anion binding; GO:0097159,organic cyclic compound binding; GO:0097367,carbohydrate derivative binding; GO:1901265,nucleoside phosphate binding; GO:1901363,heterocyclic compound binding; GO:0006793,phosphorus metabolic process; GO:0006796,phosphate-containing compound metabolic process; GO:0008150,biological_process; GO:0008152,metabolic process; GO:0009987,cellular process; GO:0044237,cellular metabolic process; GO:0005575,cellular_component; GO:0005622,intracellular anatomical structure; GO:0110165,cellular anatomical entity; GO:0043226,organelle; GO:0043227,membrane-bounded organelle; GO:0043229,intracellular organelle; GO:0043231,intracellular membrane-bounded organelle","PF10358.12:N-terminal C2 in EEIG1 and EHBP1 proteins","--","--","--"]