Os02g0527950 Query: AACUGCAAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACG CGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCA GCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCC AUAGACCCCGUCCAGGUAAGUAU Number of hits: 852 >> URS00023CE889_4513 Hordeum vulgare (H. vulgare) long non-coding RNA (HVUL_LNC006469) E-value: 9.5e-41 Identity: 87.88% Query coverage: 97.54% Gaps: 0.00% Alignment: Query 6 CAAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU 96 ||| ||| | | |||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 284 GGAAAACCAGGUACCAAAAUUUAAUAUUCAAGAACUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUAACACAAAUUACGACGUUCACUCU 374 Query 97 CCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACC 187 |||||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||| | ||||| |||||| || | |||| Sbjct 375 CCCACUUGGGGAGAUGAUAGGCCAGCGCGCCCACCAAGUGCAAUGUGGGCCACUAACCUAGGCCACGGGCCUUCUUGAUCGCCCGUCGACC 465 Query 188 CCGUCCAGGUAAGUAU 203 |||||||||||||||| Sbjct 466 CCGUCCAGGUAAGUAU 481 >> URS0002365A55_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC011279) E-value: 1.6e-40 Identity: 90.27% Query coverage: 91.13% Gaps: 0.54% Alignment: Query 18 AGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 | |||||||| ||||| | |||||||||||||||||||||||||||||||||||| || |||||||||||| || ||||||||||||| Sbjct 1173 AUCAAAAUUUUAAUUU-AGAAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUAUCAUAAAUUAUGACGUUCAUUCUCCCACUUGGG 1260 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAG 195 |||||| || || ||| || | |||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1261 GAGAUGAUAGGCGAGCACAUCAACCAAGUGCAAUGUUGGUCACUAGCCUAGGCCAUGACCCUUCUUGAUCGGCCAUAGACCCCGUCCAG 1349 Query 196 GUAAGUA 202 ||||||| Sbjct 1350 GUAAGUA 1356 >> URS00023BC36C_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC009287) E-value: 4.7e-40 Identity: 89.06% Query coverage: 94.58% Gaps: 0.00% Alignment: Query 12 CCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU 96 ||| ||| |||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 170855 CCAGGGACCAAAAUUUAAUUUUCAAGGAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU 170939 Query 97 CCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCA 181 |||||||||||||||||| ||||||||| ||||||| |||||||| | ||||| || |||||| || ||||| |||||| | Sbjct 170940 CCCACUUGGGGAGAUGGUGGGCCAGCGCAUCCACCAAAUGCAAUGUUGACCACUGACCCAGGCCACGAGCCUUCUUGAUCGCUCG 171024 Query 182 UAGACCCCGUCCAGGUAAGUAU 203 | |||||||||||||||||||| Sbjct 171025 UCGACCCCGUCCAGGUAAGUAU 171046 >> URS00024079D4_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC011138) E-value: 4.9e-40 Identity: 88.83% Query coverage: 92.61% Gaps: 0.00% Alignment: Query 16 GGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 104 | ||||| || ||||| | |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2391 UGGACAAAAGUUUAAUUUCAGGAAUUGGCGGGGGCCGCGCGAACGCGUACCCCCUCUGCCACAAAUUAUGACGUCCACUCUCCCACUUG 2479 Query 105 GGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 |||||||||||||||| ||||||||| ||||||||||||||||| | ||||||||| | ||||| |||||| || | |||||||||| Sbjct 2480 GGGAGAUGGUAAGCCAACGCACCCACAAAGUGCAAUGUGGGCCAUUGACCUAGGCCACGGGCCUUCUUGAUCGCCCGUCGACCCCGUCC 2568 Query 194 AGGUAAGUAU 203 |||||||||| Sbjct 2569 AGGUAAGUAU 2578 >> URS00023B5403_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC009336) E-value: 5.5e-39 Identity: 86.91% Query coverage: 94.09% Gaps: 0.00% Alignment: Query 11 UCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 99 |||||||||||||||||| || | |||||||||||||||||||||||||||||||||| || ||||||||||||||| || |||||| Sbjct 5136 GCCAAGGAGCAAAAUUUAAUUUAAACGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUUUAUCACAAAUUAUGACGUUCAUUCUCCC 5224 Query 100 ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCC 188 ||||||||||||| | |||| ||||||||||||||||||||||||||| | || |||||| | |||| |||||| || | ||||| Sbjct 5225 ACUUGGGGAGAUGAUGGGCCAACGCACCCACCAAGUGCAAUGUGGGCCAUUGACCCAGGCCACGGGCCUUGUUGAUCGCCCGUCGACCC 5313 Query 189 CGUCCAGGUAAGU 201 ||||||||||||| Sbjct 5314 CGUCCAGGUAAGU 5326 >> URS0002381C83_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC010593) E-value: 1.9e-38 Identity: 87.69% Query coverage: 93.10% Gaps: 3.08% Alignment: Query 13 CAAGGAGCA--AAAUUUAAAUUUGAA---GAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU 94 ||||| || |||||| || |||| | |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 27403 AAAGGACCAAAAAAUUUGAAAUUGAUACGUAUUUGGUAGGGGCCGCGCGAACGCGUACCCCCUCUAUCACAAAUUAUGACGUCCACU 27489 Query 95 CUCCCACU-UGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCC 180 ||||| | ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| |||| ||||| ||| Sbjct 27490 CUCCCUCAAAGGGGAGAUGGUAAGCCAGCGCGCCCACAAAGUGCAAUGUCGGCCACUAGCCUAGGCCAUGACUCUUCUUGAUCAGCC 27576 Query 181 AUAGACCCCGUCCAGGUAAGU 201 ||||||||||||||||||||| Sbjct 27577 AUAGACCCCGUCCAGGUAAGU 27597 >> URS00023C340A_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC010593) E-value: 1.9e-38 Identity: 87.69% Query coverage: 93.10% Gaps: 3.08% Alignment: Query 13 CAAGGAGCA--AAAUUUAAAUUUGAA---GAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU 94 ||||| || |||||| || |||| | |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 32694 AAAGGACCAAAAAAUUUGAAAUUGAUACGUAUUUGGUAGGGGCCGCGCGAACGCGUACCCCCUCUAUCACAAAUUAUGACGUCCACU 32780 Query 95 CUCCCACU-UGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCC 180 ||||| | ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| |||| ||||| ||| Sbjct 32781 CUCCCUCAAAGGGGAGAUGGUAAGCCAGCGCGCCCACAAAGUGCAAUGUCGGCCACUAGCCUAGGCCAUGACUCUUCUUGAUCAGCC 32867 Query 181 AUAGACCCCGUCCAGGUAAGU 201 ||||||||||||||||||||| Sbjct 32868 AUAGACCCCGUCCAGGUAAGU 32888 >> URS000238BCEC_4577 Zea mays (Z. mays) long non-coding RNA (ZMAY_LNC000781) E-value: 1.9e-37 Identity: 86.01% Query coverage: 95.07% Gaps: 0.00% Alignment: Query 11 UCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 99 | ||||| || |||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2536 CCAAAGGACCAGAAUUAAAUUUAUCAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 2624 Query 100 ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCC 188 ||||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||| |||| ||||| | ||||| Sbjct 2625 ACUUGGGGAGAUGGUAAGCCAGCGCACCCGCCAUGUGCAAUGCAGGCCACUGACCUAGGCCACUGGGCUUCUUGAUCCCUAGUCGACCC 2713 Query 189 CGUCCAGGUAAGUAU 203 ||||||||||||||| Sbjct 2714 CGUCCAGGUAAGUAU 2728 >> URS00023D20E1_4641 Musa acuminata (dwarf banana) long non-coding RNA (MACU_LNC004735) E-value: 1.3e-36 Identity: 86.46% Query coverage: 93.10% Gaps: 1.56% Alignment: Query 15 AGGAGCAAAAUUUAAAUUUGA--AGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 102 ||| ||| ||||| | |||||| || |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 58 UGGACCAACGUUUAAUAGACACUAGAAUUGGGUAGGGGCCGCGCGUACGCGUACCCCCUCUGCCACAAAUUAUGACGUCCACUCUCCCACU 148 Query 103 UGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 ||||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||| |||| |||||| |||| |||||||||| Sbjct 149 UGGGGAGAUGGUAAGCCAGUGCACCUCCCAAGUGCAAUGGAGGCCACUGGCCUAGGCCAUGAGCCUUUUUGAUCGCCCAUCGACCCCGUCC 239 Query 194 AGGUAAGUAU 203 |||||||||| Sbjct 240 AGGUAAGUAU 249 >> URS0002416B38_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC007972) E-value: 2.6e-36 Identity: 85.86% Query coverage: 94.09% Gaps: 0.00% Alignment: Query 13 CAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 97 || ||| |||| || || ||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 347013 CAGGGACCAAACUUAAAUUUUGAAGGAUCGACAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 347097 Query 98 CCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAU 182 ||||||||| ||||||| ||| |||| |||||||||||||||| ||||| || |||||| || ||||| |||||| | | Sbjct 347098 CCACUUGGGAAGAUGGUGGACCAACGCAUUCACCAAGUGCAAUGUGAACCACUGACCCAGGCCACGAGCCUUCUUGAUCGCUCGU 347182 Query 183 AGACCCCGUCCAGGUAAGUAU 203 |||||||||||||||||||| Sbjct 347183 CGACCCCGUCCAGGUAAGUAU 347203 >> URS0002355F7A_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008447) E-value: 1.6e-35 Identity: 85.87% Query coverage: 90.64% Gaps: 1.09% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 |||| |||| | | | || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 22490 CAAACUUUAUACAUUA--GUUUAGUAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCUGCUUGAG 22574 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 ||||||||||||| | || || |||||||||||| ||||||| | |||||||| ||||||| |||||||||||||||||||||| Sbjct 22575 GAGAUGGUAAGCCCGUGCUCCUCCCAAGUGCAAUGGAGGCCACUGACUUAGGCCAUAACCCUUCUUGAUCGGCCAUAGACCCCGUCC 22661 Query 194 AGGUAAGUAU 203 |||||||||| Sbjct 22662 AGGUAAGUAU 22671 >> URS00023E1C94_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008447) E-value: 1.6e-35 Identity: 85.87% Query coverage: 90.64% Gaps: 1.09% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 |||| |||| | | | || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 22491 CAAACUUUAUACAUUA--GUUUAGUAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCUGCUUGAG 22575 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 ||||||||||||| | || || |||||||||||| ||||||| | |||||||| ||||||| |||||||||||||||||||||| Sbjct 22576 GAGAUGGUAAGCCCGUGCUCCUCCCAAGUGCAAUGGAGGCCACUGACUUAGGCCAUAACCCUUCUUGAUCGGCCAUAGACCCCGUCC 22662 Query 194 AGGUAAGUAU 203 |||||||||| Sbjct 22663 AGGUAAGUAU 22672 >> URS0002422F35_51953 Elaeis guineensis (African oil palm) long non-coding RNA (EGUI_LNC020975) E-value: 2.8e-35 Identity: 85.41% Query coverage: 91.13% Gaps: 0.00% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 |||||||||| | | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7072 AAAAAAUUUAAAGAAAAGAAUUUGGUAGGGGCCGCGCGGACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 7159 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 ||||||||| |||||| ||| |||||||||||| ||||| ||| |||||||| | ||||| ||||| |||| ||||||||||| Sbjct 7160 GAGAUGGUAGAGCAGCGCUCCCGCCAAGUGCAAUGCGGGCCGCUACCCUAGGCCGCGGGCCUUCUUGAUCACCCAUCGACCCCGUCCA 7247 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 7248 GGUAAGUAU 7256 >> URS0002392F4A_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC004092) E-value: 2.5e-32 Identity: 82.26% Query coverage: 91.63% Gaps: 0.54% Alignment: Query 18 AGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 104 | |||| | ||||| | |||||| |||||||||||| ||||||||||| || ||||||||| |||||||||||||||||||| Sbjct 55284 AA-AAAAAAUUAAUUUAACAAAUUGGUAGGGGCCGCGCGGACGCGUACCCCUGCUGUCACAAAUUACGACGUCCACUCUCCCACUUG 55369 Query 105 GGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGU 191 |||||| |||| |||||||||||||| ||||||||||| || || ||||||||| ||||| ||| || |||| ||||||| Sbjct 55370 GGGAGAAGGUAGACCAGCGCACCCACCGCGUGCAAUGUGGACCGCUGAUCUAGGCCAUAGGCCUUCCUGACCGCCCAUCGACCCCGC 55456 Query 192 CCAGGUAAGUAU 203 |||||||||||| Sbjct 55457 CCAGGUAAGUAU 55468 >> URS00023E04AE_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC000264) E-value: 3.1e-32 Identity: 83.33% Query coverage: 88.67% Gaps: 3.23% Alignment: Query 24 AUUUAAAUUUGA----AGAAUU--GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 105 || || ||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||||||| ||||| |||||||| Sbjct 8660 AUAAAACUUUGAGAGCUGAAUUGGGGCAGGGGUCGCGCGAACGCGAACCCCCUCUACCACAAAUUAUGACGUAGACUCUGCCACUUGG 8747 Query 106 GGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 | |||| || | ||| || || |||||||||||| || |||| ||||||||||||| |||| |||||||||||||||||||||| Sbjct 8748 GCAGAUCUUAGGGCAGUGCCCCUCCCAAGUGCAAUGGAGGUCACUGUCCUAGGCCAUGACUCUUCUUGAUCGGCCAUAGACCCCGUCC 8835 Query 194 AGGUAAGUAU 203 |||||||||| Sbjct 8836 AGGUAAGUAU 8845 >> URS00023C1DF3_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC010704) E-value: 3.7e-32 Identity: 82.05% Query coverage: 96.06% Gaps: 3.08% Alignment: Query 9 AAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 97 ||| || |||||| ||||| || ||||| || ||||||||||||| | |||| |||||| ||||||||| ||| ||||||||| Sbjct 7734 AAUUCAU-----GAAAUUUUAAUUUUAAAAAUUGACAAGGGCCGCGCGAACACAUACC-CCUCUAUCACAAAUUACGACAUCCACUCUC 7816 Query 98 CCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGAC 186 ||||||| |||||||||| ||| | ||| |||||| ||||||||| |||| | |||||||||| |||||| ||||| ||||| ||| Sbjct 7817 CCACUUGAGGAGAUGGUAGACCAACACACUCACCAAAUGCAAUGUGAGCCAUUGAUCUAGGCCAUGGCCCUUCUUGAUCAGCCAUCGAC 7905 Query 187 CCCGUCCAGGUAAGUAU 203 ||||||||||||||||| Sbjct 7906 CCCGUCCAGGUAAGUAU 7922 >> URS000240F619_51953 Elaeis guineensis (African oil palm) long non-coding RNA (EGUI_LNC020976) E-value: 2.8e-35 Identity: 85.41% Query coverage: 91.13% Gaps: 0.00% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 108 |||||||||| | | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 124 AAAAAAUUUAAAGAAAAGAAUUUGGUAGGGGCCGCGCGGACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 213 Query 109 GAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUA 198 ||||||| |||||| ||| |||||||||||| ||||| ||| |||||||| | ||||| ||||| |||| ||||||||||||||| Sbjct 214 GAUGGUAGAGCAGCGCUCCCGCCAAGUGCAAUGCGGGCCGCUACCCUAGGCCGCGGGCCUUCUUGAUCACCCAUCGACCCCGUCCAGGUA 303 Query 199 AGUAU 203 ||||| Sbjct 304 AGUAU 308 >> URS000241C23D_4555 Setaria italica (foxtail millet) long non-coding RNA (SITA_LNC005245) E-value: 3e-31 Identity: 84.85% Query coverage: 81.28% Gaps: 0.00% Alignment: Query 37 GAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCG 123 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||||| | Sbjct 51230 AAUUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUUCCACAAAUUAUGACGUCCACUCUCCCGUUUAGGAAGAUGGUAAGCCAAUG 51316 Query 124 CACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | || |||||||||||| ||||| | |||||||| | |||| |||||||| || |||||||||||||||||| Sbjct 51317 CUCCUCCCAAGUGCAAUGGAGGCCAUUGAUUUAGGCCAUAGCUCUUCUUGAUCGGCUAUCGACCCCGUCCAGGUAAGU 51394 >> URS00023A46F1_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC027714) E-value: 5.4e-31 Identity: 82.12% Query coverage: 88.18% Gaps: 1.12% Alignment: Query 23 AAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 |||| | || |||||||| |||||||||| ||||||| ||| ||| ||||||||||||| |||| |||||||||| ||| Sbjct 266695 AAUUGUACCUUC--AAAUUGGCAAGGGCCGCGCGGACGCGUAACCCUACUAGCACAAAUUAUGACAUCCAUUCUCCCACUUAGGG 266777 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUC 192 ||||||||||||||| | || | |||||||||| ||| ||| |||||||||||| ||||| |||| || ||| ||||||||| Sbjct 266778 AGAUGGUAAGCCAGCACUCCUCCGAAGUGCAAUGGAGGCUGCUAACCUAGGCCAUGAGCCUUCUUGAUAGGUCAUUGACCCCGUC 266862 Query 193 CAGGUAAGU 201 ||||||||| Sbjct 266863 CAGGUAAGU 266871 >> URS000235505A_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008309) E-value: 1e-30 Identity: 84.24% Query coverage: 81.28% Gaps: 0.00% Alignment: Query 37 GAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCA 125 | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||||| || Sbjct 8309 AAUUUGGCAAGGGCCGCGCGAACGCGUACCCCCUCUUCCACAAAUUAUGACGUCCACUCUCCCGUUUAGGAAGAUGGUAAGCCAAUGCU 8397 Query 126 CCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || |||||||||||| ||||| | |||||||| | |||| |||||||| || |||||||||||||||||| Sbjct 8398 CCUCCCAAGUGCAAUGGAGGCCAUUGAUUUAGGCCAUAGCUCUUCUUGAUCGGCUAUCGACCCCGUCCAGGUAAGU 8473 >> URS00023B7350_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008309) E-value: 1e-30 Identity: 84.24% Query coverage: 81.28% Gaps: 0.00% Alignment: Query 37 GAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCA 125 | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||||| || Sbjct 8574 AAUUUGGCAAGGGCCGCGCGAACGCGUACCCCCUCUUCCACAAAUUAUGACGUCCACUCUCCCGUUUAGGAAGAUGGUAAGCCAAUGCU 8662 Query 126 CCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || |||||||||||| ||||| | |||||||| | |||| |||||||| || |||||||||||||||||| Sbjct 8663 CCUCCCAAGUGCAAUGGAGGCCAUUGAUUUAGGCCAUAGCUCUUCUUGAUCGGCUAUCGACCCCGUCCAGGUAAGU 8738 >> URS00023F77A7_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008309) E-value: 1e-30 Identity: 84.24% Query coverage: 81.28% Gaps: 0.00% Alignment: Query 37 GAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCA 125 | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||||||| || Sbjct 8309 AAUUUGGCAAGGGCCGCGCGAACGCGUACCCCCUCUUCCACAAAUUAUGACGUCCACUCUCCCGUUUAGGAAGAUGGUAAGCCAAUGCU 8397 Query 126 CCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || |||||||||||| ||||| | |||||||| | |||| |||||||| || |||||||||||||||||| Sbjct 8398 CCUCCCAAGUGCAAUGGAGGCCAUUGAUUUAGGCCAUAGCUCUUCUUGAUCGGCUAUCGACCCCGUCCAGGUAAGU 8473 >> URS00023534F9_4513 Hordeum vulgare (H. vulgare) long non-coding RNA (HVUL_LNC016999) E-value: 1.6e-29 Identity: 80.75% Query coverage: 90.64% Gaps: 5.35% Alignment: Query 18 AGCAAAAUUUAAAUUUGAA---GAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC 101 || |||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||| ||||||||| Sbjct 54115 GGCGAAAUUUAAGUUUGAACUUGAAUUGGCAGGGGCCGCGCGA-------CCCCCUCUAUCACAAAUUAAGACGUCCGCUCUCCCAC 54194 Query 102 UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCC 188 | |||||||||| |||| ||| | | |||||||| ||| | |||| | |||||||| |||||||| ||||||| | | ||||| Sbjct 54195 GAGAGGAGAUGGUAGGCCAACGCGCUCGCCAAGUGCGAUGCGAGCCAUUGAUCUAGGCCACGACCCUUCUUGAUCGGUCGUCGACCC 54281 Query 189 CGUCCAGGUAAGU 201 ||||||||||||| Sbjct 54282 CGUCCAGGUAAGU 54294 >> URS00009D2223_4577 Zea mays Zm_95 E-value: 2e-28 Identity: 94.81% Query coverage: 66.50% Gaps: 0.00% Alignment: Query 42 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 91 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 |||||||| |||||||| |||||||||| || |||| ||||| Sbjct 92 UGUGCAAUGCGGGCCACUGGCCUAGGCCACGAGGCUUCUUGAUC 135 >> URS000256471B_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 2.2e-27 Identity: 94.66% Query coverage: 64.53% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCGCUUGGGGAGAUGGUAAGCCAGCGCACCCACCAU 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUG 173 |||||||||||||||||||||||||||| | |||| || Sbjct 92 GUGCAAUGUGGGCCACUAGCCUAGGCCACGGGUCUUCCUG 131 >> URS00025CFEBA_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 3.4e-27 Identity: 93.94% Query coverage: 65.02% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUACGACGUCCACUCUCCCACUUGGGGAGAUGGUAGGCCAGCACAUCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 ||||||||||| |||||||||||||||| ||| |||| ||| Sbjct 92 GUGCAAUGUGGACCACUAGCCUAGGCCACGACUCUUCUUGA 132 >> URS00025B0B24_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 4.4e-27 Identity: 92.37% Query coverage: 64.53% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUAUCCCCUCUACCAUAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAUCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUG 173 |||||||||| |||||||| ||||||| || |||| || Sbjct 92 AUGCAAUGUGGACCACUAGCUUAGGCCACAACUCUUCUUG 131 >> URS00025E308E_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 5.1e-27 Identity: 86.49% Query coverage: 72.91% Gaps: 0.00% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAA 116 | || ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2 UAAAUUUUGAAGGAUCGACAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGAAGAUGGUGG 92 Query 117 GCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUG 173 ||| |||| |||||||||||||||| ||||| || |||||| || ||||| || Sbjct 93 ACCAACGCAUUCACCAAGUGCAAUGUGAACCACUGACCCAGGCCACGAGCCUUCUUG 149 >> URS00025B8EF3_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 7.8e-27 Identity: 93.94% Query coverage: 65.02% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUUCACUCUCCCACUUGGGGAGAUGAUAGGCCAGCGCACCCACCAC 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 |||||||||||||||||| ||||||||| || ||||| ||| Sbjct 92 GUGCAAUGUGGGCCACUAACCUAGGCCACGAGCCUUCUUGA 132 >> URS000258638B_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 8.5e-27 Identity: 93.18% Query coverage: 65.02% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUUCACUCUCCCACUUGGGGAGAUGAUAGGCCAGCGCACCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 ||||||||||||||||| | ||||||| || ||||| ||| Sbjct 92 AUGCAAUGUGGGCCACUAACUUAGGCCACGAGCCUUCUUGA 132 >> URS0002395770_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC000982) E-value: 1.6e-27 Identity: 78.26% Query coverage: 90.64% Gaps: 0.54% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 109 || ||||| |||| || ||||| |||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||| || Sbjct 482 AAAGCAUUAAAACUGAAUU-GGGGUAGGGGUCGCGCGGACGCGAACCCCCUCUACCACAAAUUAUGACGUAGACUCUGCCACUUGGGCAG 570 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 || || | ||| || || | ||||||||| || |||| |||||||||| ||||| |||||| ||||| ||||||||||||||| Sbjct 571 AUCUUAGGGCAGUGCCCCUCCUGAGUGCAAUGGAGGUCACUUCUCUAGGCCAUGGUCCUUCUUGAUCGACCAUACACCCCGUCCAGGUAA 660 Query 200 GUAU 203 |||| Sbjct 661 GUAU 664 >> URS00025B6231_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 2.2e-26 Identity: 93.18% Query coverage: 65.02% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUACGACGUCCACUCUCCCACUUGGGGAGAUGGUAGGCCAGCGCAUCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 ||||||||||| ||||||||| || ||| ||| |||| ||| Sbjct 92 GUGCAAUGUGGACCACUAGCCCAGACCACGACUCUUCUUGA 132 >> URS00023FF8F8_3641 Theobroma cacao (cacao) long non-coding RNA (TCAC_LNC000106) E-value: 3.1e-26 Identity: 78.69% Query coverage: 89.66% Gaps: 0.55% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU 111 | |||| |||| | |||| || |||||||||||| |||| |||||||| |||||||||||||||| |||||||||||||||||| Sbjct 454 ACGUUUAUAUUUCCAAAAUUGGGUAGGGGCCGCGCGCACGCAGGCCCCCUCUGCCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGAC 544 Query 112 GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || | ||||| | |||||||||| ||||| |||||||||||| |||| |||||| |||| ||||||||||||||||||| Sbjct 545 CUUAGACAGAUGCACCACCGAAGUGCAAUGGAGGCCAUCUACCUAGGCCAUGAGCCUUUUUGAUCGCCCAUUGACCCCGUCCAGGUAAGUA 635 Query 203 U 203 | Sbjct 636 U 636 >> URS00025B7B44_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.1e-25 Identity: 90.08% Query coverage: 64.53% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||| || |||||||||||| || ||||||||||||||||||| || || ||| || | ||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUAUCAUAAAUUAUGACGUUCAUUCUCCCACUUGGGGAGAUGAUAGGCGAGCACAUCAACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUG 173 ||||||||| || |||||||||||||||||||||||| || Sbjct 92 GUGCAAUGUUGGUCACUAGCCUAGGCCAUGACCCUUCUUG 131 >> URS00023B25D8_4641 Musa acuminata (dwarf banana) long non-coding RNA (MACU_LNC005446) E-value: 2.6e-25 Identity: 79.35% Query coverage: 89.66% Gaps: 2.72% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 | |||| | | | ||| | ||||||||||| |||||| ||||| |||||||||||| |||| |||||||||||||||||| Sbjct 54424 AGAUUUGAUAUG---GCAUUGUGUGGGGGCCGCGCGGACGCGUUCCCCCGAUACCACAAAUUACGACGCCCACUCUCCCACUUGGGG 54507 Query 108 AGAUGGUAAGCCAGCGCA-CCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 |||||||| |||| || ||| ||| |||||||| ||||| || ||||||||| | ||||| ||||| || | |||||||||| Sbjct 54508 AGAUGGUAGAGCAGCUCAACCCCCCACGUGCAAUGGGGGCCGCUGCCCUAGGCCACGUGCCUUCUUGAUCACCCGUCGACCCCGUCC 54594 Query 194 AGGUAAGUAU 203 |||||||||| Sbjct 54595 AGGUAAGUAU 54604 >> URS00023D1402_3871 Lupinus angustifolius (narrow-leaved blue lupine) long non-coding RNA (LANG_LNC001377) E-value: 2.6e-25 Identity: 76.22% Query coverage: 91.13% Gaps: 1.62% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 109 ||||||| | | || | |||||||||||||||||||| |||||||| ||||||||||||| | |||| ||||||||| || Sbjct 228 AACAAAUUUAGACUG---GAUUGGGCAGGGGCCGCGCGAACGCAGGCCCCCUCUUUCACAAAUUAUGACAUAGGCUCUACCACUUGGGUAG 315 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 | || || ||| | | | |||||||||| | ||| ||||||||||||| ||||| ||||| |||| ||||||||||||||||| Sbjct 316 ACCUUAGGCUAGCACCCUUCCAAAGUGCAAUGGAAGUCACAAGCCUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCGUCCAGGUAAG 406 Query 201 UAU 203 ||| Sbjct 407 UAU 409 >> URS00025A3AAA_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.8e-24 Identity: 90.91% Query coverage: 65.02% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUGGGCCAGCGCAUCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 |||||||| | ||||| || |||||| || ||||| ||| Sbjct 92 AUGCAAUGUUGACCACUGACCCAGGCCACGAGCCUUCUUGA 132 >> URS000252C33A_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 2e-24 Identity: 89.31% Query coverage: 64.53% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 |||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| Sbjct 1 GCAGAGGCUGCGCGAACGCGUAACCCCUCUACCAUAAAUUAUGACGUUCACUCUCCCGCUUGGGGAGAUGGUAAGCCAGCGCAUCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUG 173 |||||||||| |||||| ||||||||| |||||| || Sbjct 92 GUGCAAUGUGAACCACUAACCUAGGCCACAGCCCUUCUUG 131 >> URS000254BC10_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 2.1e-24 Identity: 89.31% Query coverage: 64.53% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| || ||| |||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUACGACGUUCACUCUCCCACUUGGGGAGAUGAUAAGUCAACGCGCCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUG 173 ||||||||||||||| | || ||||||| | |||| || Sbjct 92 GUGCAAUGUGGGCCAUUGGCUUAGGCCACGGGCCUUGUUG 131 >> URS0002382C7D_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC001675) E-value: 2.6e-24 Identity: 75.82% Query coverage: 89.66% Gaps: 1.10% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 108 |||||| | | ||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||| | Sbjct 23814 AAAUUUGGGCU--UAUGAUUGGUAGGGGCCGCGCGAACGCAGGCCCCCUCUAUCACAAAUUAUGACGUAGGCUCCACCACUUGGGUA 23898 Query 109 GAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAG 195 || || || | | || | |||||||||| || || | |||||||||| ||||| |||||| |||| |||||||||||| Sbjct 23899 GACCUUAGGCAGACACCCCUCCUAAGUGCAAUGGAGGUCAUCAACCUAGGCCAUAGGCCUUCUUGAUCGCCCAUUGACCCCGUCCAG 23985 Query 196 GUAAGUAU 203 |||||||| Sbjct 23986 GUAAGUAU 23993 >> URS00023AD06F_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC007494) E-value: 3.2e-24 Identity: 74.35% Query coverage: 93.60% Gaps: 0.52% Alignment: Query 14 AAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-A 100 | || | | |||| | || | | | ||||||||||||||||| || |||| ||||| |||||||||||||| ||| || | Sbjct 9454 CAAGAAAAUAUUUUAGAAUUAAGAAUUGGGCAGGGGCCGCGCGAAUGCAGGCCCCUUCUACUACAAAUUAUGACGUAGGCUCAACCAA 9541 Query 101 CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCC 188 |||||| || || || || | || |||||||||||| || ||| | | ||||||||| ||||| ||||| |||| ||||| Sbjct 9542 CUUGGGCUGACCUUAGGCGGGCACCCCUCCCAAGUGCAAUGGAGGUCACCAACUUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCC 9629 Query 189 CGUCCAGGUAAGUAU 203 ||||||||||||||| Sbjct 9630 CGUCCAGGUAAGUAU 9644 >> URS00025C28C1_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 3.5e-24 Identity: 90.15% Query coverage: 65.02% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUAUCACAAAUUAUGACGUCCACUCUCCCACUUGAGGAGAUGGUGGACCAGCGCAUCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 ||||||||||| ||||| || |||||| || ||||| ||| Sbjct 92 GUGCAAUGUGGACCACUGACCCAGGCCACGAGCCUUCUUGA 132 >> URS00025AA996_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 3.9e-24 Identity: 90.15% Query coverage: 65.02% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| |||||||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUUCACUCUCCCACUUGGGGAGAUGAUGGGCCAACGCACCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 ||||||||||||||| | || |||||| | ||||| ||| Sbjct 92 GUGCAAUGUGGGCCAUUGACCCAGGCCACGGGCCUUCUUGA 132 >> URS0002352EBA_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC000869) E-value: 4.9e-24 Identity: 76.44% Query coverage: 93.60% Gaps: 1.57% Alignment: Query 14 AAGGAGCAAAAUUUAAAUUUGAAGAAUUG-GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU 103 ||||| ||| |||| ||| ||||||| | ||||||||||||||||| |||| ||||||||||||||||||| ||| |||||| Sbjct 19 GAGGAGAAAAUUUUAGGUUU--AGAAUUGUGUAGGGGCCGCGCGAACGCAGGACCCCACUACCACAAAUUAUGACGUAGGCUCGACCACUU 107 Query 104 GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 ||| || || || ||| | || |||||||||| || ||| | ||||||||||| ||| |||||| |||| |||||| |||| Sbjct 108 GGGUCGACCUUAGGCAAGCACCCCUCUAAAGUGCAAUGAAGGUCACCAACCUAGGCCAUGGGUCUUAUUGAUCGCCCAUUGACCCCAUCCA 198 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 199 GGUAAGUAU 207 >> URS000241DF2A_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC002199) E-value: 5.6e-24 Identity: 75.54% Query coverage: 90.64% Gaps: 0.00% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 108 |||| || | | || || ||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||| Sbjct 837 CAAACGUUUGGACUUAGGAUCGGGUAGGGGCCGCGCGAACGCAGGCCCCUACUACCACAAAUUAUGACGUAGGCUCGGCCACUUGGGCC 925 Query 109 GAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGU 197 || || || ||| | || | |||||||||| || ||||||||||||||||| ||| |||||| |||| |||||||||||||| Sbjct 926 GACCUUAGGCUAGCACCCCUCCAAAGUGCAAUGGAGGUCACUAGCCUAGGCCAUGGGUCUUGUUGAUCGCCCAUUGACCCCGUCCAGGU 1014 Query 198 AAGUAU 203 |||||| Sbjct 1015 AAGUAU 1020 >> URS0000A512DF_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 5.8e-24 Identity: 81.25% Query coverage: 78.82% Gaps: 0.00% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||||||||||||| || | ||| | || | ||| Sbjct 2 CAGGGGUCGCGCGAACGCAGACCCCCUCAACCACAAAUUAUGAUGUAGGCUCUCCCACUUGGGGAGACCUUAGGGUAGCACCCCUCCUAAG 92 Query 135 UGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| | || | |||||||||||| ||||| |||||| ||||||||||| ||||||||||||| Sbjct 93 UGCAAUGGAAGUUACCAACCUAGGCCAUGAACCUUCCUGAUCGUCCAUAGACCCCAUCCAGGUAAGUAU 161 >> URS00025B282C_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 8.6e-24 Identity: 90.98% Query coverage: 65.52% Gaps: 0.75% Alignment: Query 42 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| Sbjct 1 GGCAGGGGCCGCGCGAACGCGUACC-CCUCUACCACAAAUUAUGACAUCCACUCUCCCACUUGGGGAGAUGGUGGGCCAGCGCAUCCACCA 90 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 |||||||||||| ||||| || |||||| || ||||| ||| Sbjct 91 AGUGCAAUGUGGACCACUGACCCAGGCCACGAGCCUUCUUGA 132 >> URS000257721A_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 9.1e-24 Identity: 90.15% Query coverage: 65.02% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUAGCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUGGGCCAACGCACCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 |||||||||| |||| | || |||||| | ||||| ||| Sbjct 92 GUGCAAUGUGAGCCAUUGACCCAGGCCACGGGCCUUCUUGA 132 >> URS0002387AEF_3983 Manihot esculenta (cassava) long non-coding RNA (MESC_LNC004221) E-value: 4.3e-25 Identity: 78.57% Query coverage: 87.19% Gaps: 2.75% Alignment: Query 27 UAAAUUUG----AAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUGGGGAGA 110 ||| |||| ||| |||| ||||||||||||||||| |||||||| |||||||||| ||||| ||||||| ||||||||||| Sbjct 1603 UAACUUUGGUCUGAGAUUUGGUAGGGGCCGCGCGAACGCAGGCCCCCUCUGCCACAAAUUACGACGUAGGCUCUCCCAACUUGGGGAGA 1691 Query 111 UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 || ||||| | || | |||||||||| || |||| ||||||||||| ||||| ||||| ||| |||||||||||||||| Sbjct 1692 CCUUAGACCAGCACCCCUCCUAAGUGCAAUGGAGGUCACUGACCUAGGCCAUGGACCUUCCUGAUCACACAUUGACCCCGUCCAGGUAA 1780 Query 200 GUAU 203 |||| Sbjct 1781 GUAU 1784 >> URS00023E8B66_226208 Salvia miltiorrhiza (S. miltiorrhiza) long non-coding RNA (SMIL_LNC006541) E-value: 1.8e-23 Identity: 77.22% Query coverage: 87.19% Gaps: 2.22% Alignment: Query 27 UAAAUUUGAA--G-AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 112 |||||||| | | | | ||||||||| ||||| |||| |||||||||||||||||||||||||| || ||||||||| || Sbjct 123 UAAAUUUGCAUUGAAUUAGGCAGGGGCUGCGCGCACGCAAACCCCCUCUACCACAAAUUAUGACGUAAGUUCGACCACUUGGGUCGACU 211 Query 113 GUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || || ||| | | | |||||||||| || || | |||||||||||| ||||| |||| |||| |||||||||||||||||| Sbjct 212 UUAGGCAAGCACCC-UCCUAAGUGCAAUGGAGGUUACAAACCUAGGCCAUGAGCCUUCUAGAUCAACCAUCGACCCCGUCCAGGUAAGU 299 Query 202 AU 203 || Sbjct 300 AU 301 >> URS00019A28CD_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.9e-23 Identity: 81.37% Query coverage: 79.31% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||| || | | |||| ||| Sbjct 1 GCAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACCUUAGGGUGGUGCACUUUCCA 90 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||||| | ||||| | ||||||||||| ||||| ||||| |||| ||||||| |||||||||||| Sbjct 91 AGUGCAAUGAGAGCCACCAUCCUAGGCCAUGGGCCUUCUUGAUCCCCCAUUGACCCCGCCCAGGUAAGUAU 161 >> URS00019A2A46_85681 Citrus clementina U1 spliceosomal RNA E-value: 2e-23 Identity: 81.99% Query coverage: 79.31% Gaps: 0.62% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 ||||||||||||||||||| | ||| ||||||||||||||||||| |||||||||||||||||| || | | |||| | ||| Sbjct 1 GCAGGGGCCGCGCGAACGCAGGC-CCCACUACCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACAUUAGGGUGGUGCACUCUCCA 89 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||||| | ||||| | ||||||||||| ||||| ||||| |||| ||||||| |||||||||||| Sbjct 90 AGUGCAAUGAGAGCCACCAUCCUAGGCCAUGGACCUUCCUGAUCACCCAUUGACCCCGCCCAGGUAAGUAU 160 >> URS00025BD94D_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 3e-23 Identity: 81.46% Query coverage: 74.38% Gaps: 1.99% Alignment: Query 23 AAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGG 113 | ||| |||||| | ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||| Sbjct 2 AGUUUGAAUUUG---AGUUGGCAGAGGCCGCGCGAACGCGUACCCCCUCUGUCACAAAUUAUGACGUCCACUCUCCAACAAGAGGAGAUGG 89 Query 114 UAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUG 173 || |||| || | | |||||||||||| | |||| | |||||||| | |||||| || Sbjct 90 UAGGCCAACGUGCUCGCCAAGUGCAAUGCGAGCCAUUGAUCUAGGCCACGGCCCUUCUUG 149 >> URS000236F241_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC007754) E-value: 1.3e-23 Identity: 75.27% Query coverage: 89.66% Gaps: 1.10% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 |||| || | | ||||||| | |||||||||||||||| ||||| ||| ||||||||||||||| ||| ||||||||| Sbjct 11875 AAAAAAUUGA--CUAGAGAAUUGACGGGGGCCGCGCGAACGCAGGCCCCCACUAGCACAAAUUAUGACGUAGGCUCGACCACUUGGG 11959 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 || ||||| | ||| || | ||||||||| || | | | | ||||||||| ||||| ||||| |||| |||||||||| Sbjct 11960 CCGACCUUAAGCUAACGCCCCUCCUGAGUGCAAUGGAGGUCGCCAACUUAGGCCAUGGACCUUCUUGAUCAACCAUUGACCCCGUCC 12046 Query 194 AGGUAAGU 201 |||||||| Sbjct 12047 AGGUAAGU 12054 >> URS00023B016C_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC004134) E-value: 3.1e-23 Identity: 75.00% Query coverage: 90.15% Gaps: 0.54% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAG 109 |||| | | | | || | ||||||||| |||||||||| ||||| | | |||||||||||| | ||||||| || ||| |||| Sbjct 78 CAAAUUCAUAUUCUUUAGUUUGGGCAGGGGCUGCGCGAACGCAAGCCCCCACGGCAACAAAUUAUGACAUUGACUCUCCUACAUUGAGGAG 168 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 || || || || | || | ||||||||| || ||| |||| ||||||||| ||||| |||||| ||||||||| ||||||||||| Sbjct 169 AUCAUAGGCAGGCACCCCUUCAGAGUGCAAUGAAGGUCACCAGCCCAGGCCAUGAGCCUUCUUGAUCGCUCAUAGACCCUGUCCAGGUAAG 259 Query 201 UA 202 || Sbjct 260 UA 261 >> URS00019A276A_85681 Citrus clementina U1 spliceosomal RNA E-value: 6.8e-23 Identity: 81.65% Query coverage: 77.83% Gaps: 0.00% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 |||||||||||||||| ||||| || |||||||||||||||| |||| || |||||| ||| ||||| | ||||| |||||| Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUGCCUCUUGGGCAGACCUUAAGCGGGUGCACCUCCCAAGU 93 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| |||||| | | ||||||||| ||||||||||| |||| |||||||||||||||||||| Sbjct 94 GCAAUGGAGGCCACCAACUUAGGCCAUGGGCCUUCAUGAUCACCCAUUGACCCCGUCCAGGUAAGUAU 161 >> URS0002396D4D_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC004135) E-value: 7e-23 Identity: 76.24% Query coverage: 88.67% Gaps: 1.10% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAG 109 | | || || || ||| | ||||||||| |||||||||| ||||| | | |||||||||||| | ||||||| || ||| |||| Sbjct 834 AGAGUUGAACUU-UAGAUUGGGCAGGGGCUGCGCGAACGCAAGCCCCCACGGCAACAAAUUAUGACAUUGACUCUCCUACAUUGAGGAG 921 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUA 198 || || || || | || | |||||||||| || ||| |||| ||||||| | ||||| |||||| ||||||||| ||||||||| Sbjct 922 AUCAUAGGCAGGCACCCCUUCAAAGUGCAAUGAAGGUCACCAGCCCAGGCCAUAAGCCUUCUUGAUCGCUCAUAGACCCUGUCCAGGUA 1010 Query 199 AGU 201 ||| Sbjct 1011 AGU 1013 >> URS000240E1F1_4039 Daucus carota (carrot) long non-coding RNA (DCAR_LNC005651) E-value: 9.2e-23 Identity: 75.41% Query coverage: 89.66% Gaps: 2.73% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGG-GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 109 || | ||||| |||||||| ||| || |||||||||| | ||| ||| ||||||||||||||| ||| ||||||||| || Sbjct 306 CAGAGUUUAAC----UAGAAUUGGUGGGGAGCUGCGCGAACGCAAGCUCCCCCUAGCACAAAUUAUGACGUAGGCUCCACCACUUGGGUAG 392 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 | || || || || | | ||||||||| ||| ||| ||||||||||| |||||| ||||| ||||| ||||||||||||||||| Sbjct 393 ACCUUAGGCGAGAGCCCUUCCGGAGUGCAAUGGAAGCCUCUAACCUAGGCCAUGGCCCUUCUUGAUCAGCCAUCGACCCCGUCCAGGUAAG 483 Query 201 U 201 | Sbjct 484 U 484 >> URS00023711DB_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC011668) E-value: 4.1e-24 Identity: 77.60% Query coverage: 88.67% Gaps: 3.28% Alignment: Query 24 AUUUAAAUUUGAAGAAUUG--GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGG 107 || ||| || ||||| | ||| ||||||||||||| ||||| | | |||||||||||||| |||||| || ||| || Sbjct 46667 UUUAAAAACUG---AAUUGAUGAAGGAGCCGCGCGAACGCAGGCCCCCACAGCAACAAAUUAUGACGUUGGCUCUCCUACGUUGAGG 46750 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 ||| ||||| ||| | || | |||||||||| || ||| |||||||||||||| ||||| |||||| |||| ||||||||||| Sbjct 46751 AGACCAUAAGCAAGCACCCCUCCUAAGUGCAAUGGAGGUCACCAGCCUAGGCCAUGAGCCUUCUUGAUCGCCCAUUGACCCCGUCCA 46837 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 46838 GGUAAGUAU 46846 >> URS000237332E_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC011669) E-value: 4.1e-24 Identity: 77.60% Query coverage: 88.67% Gaps: 3.28% Alignment: Query 24 AUUUAAAUUUGAAGAAUUG--GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGG 107 || ||| || ||||| | ||| ||||||||||||| ||||| | | |||||||||||||| |||||| || ||| || Sbjct 39777 UUUAAAAACUG---AAUUGAUGAAGGAGCCGCGCGAACGCAGGCCCCCACAGCAACAAAUUAUGACGUUGGCUCUCCUACGUUGAGG 39860 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 ||| ||||| ||| | || | |||||||||| || ||| |||||||||||||| ||||| |||||| |||| ||||||||||| Sbjct 39861 AGACCAUAAGCAAGCACCCCUCCUAAGUGCAAUGGAGGUCACCAGCCUAGGCCAUGAGCCUUCUUGAUCGCCCAUUGACCCCGUCCA 39947 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 39948 GGUAAGUAU 39956 >> URS0002387CE9_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC011668) E-value: 1.1e-22 Identity: 76.76% Query coverage: 89.66% Gaps: 3.24% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUG--GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGG 105 || || ||| ||| |||| | ||||||||||||||||| ||||| | | ||||||||||||| |||||| || ||| Sbjct 44134 AAUUUCAAAACUGA---AUUGAUGAAGGGGCCGCGCGAACGCAGGCCCCCACAGCAACAAAUUAUGACGCUGGCUCUCCUACGUUGA 44217 Query 106 GGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUC 192 ||||| || || ||| | || | |||||||||| || ||| |||||||| ||||| ||||| |||||| |||| ||||||||| Sbjct 44218 GGAGACCAUAGGCAAGCACCCCUCCUAAGUGCAAUGGAGGUCACCAGCCUAGGACAUGAGCCUUCUUGAUCGCCCAUCGACCCCGUC 44304 Query 193 CAGGUAAGUAU 203 ||||||||||| Sbjct 44305 CAGGUAAGUAU 44315 >> URS0002374718_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC006123) E-value: 1.6e-22 Identity: 76.50% Query coverage: 89.16% Gaps: 1.64% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCC--UCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 | |||||||||||| | ||||||||| ||||| | ||||| ||||||| ||||||| |||| ||||| |||| |||| || ||||| Sbjct 3352 CUAAAUUUAAAUUUUCUGGAUUGGCAGG-GCCGCACAAACGCAUACCCCCCAUCUACCAAAAAUCAUGACAUCCAUUCUCUCAAUUGGG 3439 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAG 195 ||||||||| || | | | |||||| |||||| || ||| |||||||| |||||||| | || | ||| |||||||||| Sbjct 3440 GAGAUGGUAGAACAACACGCUCACCAAAUGCAAUUUGAGCCGUGGAUCUAGGCCACGACCCUUCUUUAUAAGUCAUCAGCCCCGUCCAG 3528 Query 196 GUAAG 200 ||| | Sbjct 3529 GUAGG 3533 >> URS00023FDA94_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC006123) E-value: 1.6e-22 Identity: 76.50% Query coverage: 89.16% Gaps: 1.64% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCC--UCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 | |||||||||||| | ||||||||| ||||| | ||||| ||||||| ||||||| |||| ||||| |||| |||| || ||||| Sbjct 3338 CUAAAUUUAAAUUUUCUGGAUUGGCAGG-GCCGCACAAACGCAUACCCCCCAUCUACCAAAAAUCAUGACAUCCAUUCUCUCAAUUGGG 3425 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAG 195 ||||||||| || | | | |||||| |||||| || ||| |||||||| |||||||| | || | ||| |||||||||| Sbjct 3426 GAGAUGGUAGAACAACACGCUCACCAAAUGCAAUUUGAGCCGUGGAUCUAGGCCACGACCCUUCUUUAUAAGUCAUCAGCCCCGUCCAG 3514 Query 196 GUAAG 200 ||| | Sbjct 3515 GUAGG 3519 >> URS000258EC02_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.8e-22 Identity: 87.88% Query coverage: 65.02% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | ||| |||||||||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUUCAUUCUCCCACUUGGGGAGAUGAUGGGCCGACGCACCCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 ||||||||||||||| || |||||| | ||||| ||| Sbjct 92 GUGCAAUGUGGGCCAUCGACCCAGGCCACGGGCCUUCUUGA 132 >> URS000241E3FF_3988 Ricinus communis (castor bean) long non-coding RNA (RCOM_LNC000238) E-value: 1.5e-24 Identity: 78.07% Query coverage: 89.16% Gaps: 3.74% Alignment: Query 23 AAUUUAAAUUUGAAG-----AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUU 103 ||| ||||| ||| | | | | |||||||||||||||||| ||||| || |||||||||||||||| ||||||| |||| Sbjct 12207 AAUGUAAAU-UGACGACUAAAUUGGUCAGGGGCCGCGCGAACGCUGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUCCCAACUU 12292 Query 104 GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 ||||||| || |||||| | || | |||||||||| || ||| | ||||||||||| |||| ||||| |||| ||||||| Sbjct 12293 GGGGAGACCUUAGGCCAGCACCCCUCCUAAGUGCAAUGGAGGUCACAAACCUAGGCCAUGGACCUUAUUGAUCACCCAUCGACCCCG 12379 Query 191 UCCAGGUAAGUAU 203 ||||||||||||| Sbjct 12380 UCCAGGUAAGUAU 12392 >> URS00023CF971_3888 Pisum sativum (pea) long non-coding RNA (PSAT_LNC039773) E-value: 2.5e-22 Identity: 73.54% Query coverage: 92.61% Gaps: 0.53% Alignment: Query 16 GGAGCAAAAUUUAAAUUUGAAGAAUUGGCA-GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 105 | | |||| || | | |||||| | |||||||||||||||| ||||| | | ||||||||||| || ||| |||||||| Sbjct 153 GAAACAAAUAUUUAGUAACUUCAAUUGGGAGGGGGCCGCGCGAACGCAGGCCCCCACAGCAACAAAUUAUGAUGUAGGCUCCACCACUUGG 243 Query 106 GGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGG 196 | ||| || || ||| | || | |||||||||| || |||| ||||||||||| |||| |||||| |||| |||||| |||||| Sbjct 244 GUAGACCUUAGGCUAGCACCCCUCCUAAGUGCAAUGGAGGUCACUUGCCUAGGCCAUAGACCUUGAUGAUCAUCCAUUGACCCCAUCCAGG 334 Query 197 UAAGUAU 203 ||||||| Sbjct 335 UAAGUAU 341 >> URS00019A2884_85681 Citrus clementina U1 spliceosomal RNA E-value: 6.5e-22 Identity: 81.25% Query coverage: 78.82% Gaps: 0.63% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||| || | | |||| | ||| Sbjct 1 GCAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACCUUAGGGUGGUGCACUCUCCA 90 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||| | | ||||| ||||||||||| ||||| ||||| |||| ||||||| ||||||||||| Sbjct 91 AGUGCAAUAAGAGUCACUAUCCUAGGCCAUGGGCCUUCUUGAUCC-CCAUCGACCCCGCCCAGGUAAGUA 159 >> URS0000A33835_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 1.2e-21 Identity: 79.87% Query coverage: 78.33% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 ||||||||||||||||| ||||| ||||||||||||||||||| |||| | ||||| ||| || || ||| | || |||||| Sbjct 3 AGGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUAUGACGUAGGCUCUGUCUCUUGGACAGACCUUAGGCUAGCACCCCUCCCAAGU 93 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || ||| ||||||||||||| |||| ||||| |||| |||||||||||||||||||| Sbjct 94 GCAAUGGAGGUCACCAGCCUAGGCCAUGGGCCUUGUUGAUCACCCAUUGACCCCGUCCAGGUAAGUAU 161 >> URS00019A274C_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.2e-21 Identity: 81.13% Query coverage: 77.83% Gaps: 0.63% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU-GGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 |||||||||||||||| ||||| || |||||||||||||||| ||| |||||| ||| || || || | ||||| ||||| Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCAACCACUUUGGGUUGACCUUAGGCGGGUGCACCUCCCAAG 93 Query 135 UGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| |||||| | ||||||||||| |||||||||||| |||| |||||||||||||||||||| Sbjct 94 UGCAAUGGAGGCCACCAACCUAGGCCAUGGGCCUUCAUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 162 >> URS00019A2BE0_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.7e-21 Identity: 81.13% Query coverage: 77.83% Gaps: 0.63% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG-AGAUGGUAAGCCAGCGCACCCACCAAG 134 |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||| ||| || || || | ||||| | ||| Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUAUGACGUAGGCUCAGCCACUUUGGGCUGACCUUAGGCGGGUGCACCUCCGAAG 93 Query 135 UGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| |||||| | |||||||||||| |||| ||||||| |||| |||||||||||||||||||| Sbjct 94 UGCAAUGGAGGCCACCAACCUAGGCCAUGAGCCUUAAUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 162 >> URS0002547AFB_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 2e-21 Identity: 85.50% Query coverage: 64.53% Gaps: 0.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||| || | ||| |||||| Sbjct 1 GCAGGGGCCACGCGAACGCGUACCCCCUCUACCACAAAUUAUGACAUCCAUUCUCCCACUUGGGAAGAUGGUAGAUCAACACACUCACCAA 91 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUG 173 ||| |||| | |||| | |||||||| |||||||| || Sbjct 92 GUGUAAUGCGAGCCAUUGAUCUAGGCCACGACCCUUCUUG 131 >> URS00021D1069_158383 Olea europaea subsp. europaea non-coding RNA E-value: 2.7e-21 Identity: 75.86% Query coverage: 84.73% Gaps: 1.15% Alignment: Query 18 AGCA-AAAUUUAAAUUUGAAGAAUUG-GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 104 | | || || || | |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| Sbjct 653 AUUAAAACCUUCAAACUAAAGAAUUGGGCAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGACGUAGGCUCGACCACUUG 741 Query 105 GGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCC 189 || || || || |||| || | |||||||||| || | | | ||||||||||| |||| |||||| |||| |||||| Sbjct 742 GGCCGACCUUAGGCGGGCGCCCCUCCUAAGUGCAAUGGAGGUCGCCAACCUAGGCCAUGGGUCUUCUUGAUCGCCCAUUGACCCC 826 >> URS000238A02E_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC012863) E-value: 2.9e-21 Identity: 74.58% Query coverage: 86.70% Gaps: 0.56% Alignment: Query 28 AAAUUUGAAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAG 117 |||| || || || ||||||||||||||||| ||||| || |||||||||||||||| ||| ||||| ||| | || | Sbjct 252 UUUGUUGAUGACUUAGGUAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCGACCACUAGGGCCAACCUUAGG 342 Query 118 CCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | || | || | |||||||||| || ||| | ||||||||||| | ||| |||||| |||| ||||| |||||||||||||| Sbjct 343 CGGGCACCCCUCCAAAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGCUCUUAUUGAUCGCCCAUUGACCCUGUCCAGGUAAGUAU 428 >> URS00019A275F_85681 Citrus clementina U1 spliceosomal RNA E-value: 3.1e-21 Identity: 81.13% Query coverage: 77.83% Gaps: 0.63% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG-AGAUGGUAAGCCAGCGCACCCACCAAG 134 |||||||||||||||| ||||| || |||||||||||||||| ||| |||||| ||| || || || | ||||| ||||| Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCAGCCACUUUGGGCUGACCUUAGGCGGGUGCACCUCCCAAG 93 Query 135 UGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| |||||| | ||||||||||| |||||||||||| |||| |||||||||||||||||||| Sbjct 94 UGCAAUGGAGGCCACCAACCUAGGCCAUGGGCCUUCAUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 162 >> URS000239921B_226208 Salvia miltiorrhiza (S. miltiorrhiza) long non-coding RNA (SMIL_LNC006540) E-value: 1.8e-23 Identity: 77.22% Query coverage: 87.19% Gaps: 2.22% Alignment: Query 27 UAAAUUUGAA--G-AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 112 |||||||| | | | | ||||||||| ||||| |||| |||||||||||||||||||||||||| || ||||||||| || Sbjct 450 UAAAUUUGCAUUGAAUUAGGCAGGGGCUGCGCGCACGCAAACCCCCUCUACCACAAAUUAUGACGUAAGUUCGACCACUUGGGUCGACU 538 Query 113 GUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || || ||| | | | |||||||||| || || | |||||||||||| ||||| |||| |||| |||||||||||||||||| Sbjct 539 UUAGGCAAGCACCC-UCCUAAGUGCAAUGGAGGUUACAAACCUAGGCCAUGAGCCUUCUAGAUCAACCAUCGACCCCGUCCAGGUAAGU 626 Query 202 AU 203 || Sbjct 627 AU 628 >> URS000234A9BB_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001487) E-value: 4e-21 Identity: 74.86% Query coverage: 87.68% Gaps: 1.68% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAG 109 ||| | | || | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || |||||||| Sbjct 261608 UUAGACU--AAAAUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAG 261690 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 | || | || | || | ||||||||| || ||| | ||||||||||| || || |||||| |||| ||||| ||||| Sbjct 261691 ACCAUAGACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCA 261775 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 261776 GGUAAGUAU 261784 >> URS000237D7EB_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001488) E-value: 4e-21 Identity: 74.86% Query coverage: 87.68% Gaps: 1.68% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAG 109 ||| | | || | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || |||||||| Sbjct 650259 UUAGACU--AAAAUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAG 650341 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 | || | || | || | ||||||||| || ||| | ||||||||||| || || |||||| |||| ||||| ||||| Sbjct 650342 ACCAUAGACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCA 650426 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 650427 GGUAAGUAU 650435 >> URS0002383582_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001487) E-value: 4e-21 Identity: 74.86% Query coverage: 87.68% Gaps: 1.68% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAG 109 ||| | | || | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || |||||||| Sbjct 261576 UUAGACU--AAAAUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAG 261658 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 | || | || | || | ||||||||| || ||| | ||||||||||| || || |||||| |||| ||||| ||||| Sbjct 261659 ACCAUAGACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCA 261743 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 261744 GGUAAGUAU 261752 >> URS00023ABEFB_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001487) E-value: 4e-21 Identity: 74.86% Query coverage: 87.68% Gaps: 1.68% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAG 109 ||| | | || | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || |||||||| Sbjct 261544 UUAGACU--AAAAUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAG 261626 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 | || | || | || | ||||||||| || ||| | ||||||||||| || || |||||| |||| ||||| ||||| Sbjct 261627 ACCAUAGACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCA 261711 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 261712 GGUAAGUAU 261720 >> URS00023B9AB5_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001487) E-value: 4e-21 Identity: 74.86% Query coverage: 87.68% Gaps: 1.68% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAG 109 ||| | | || | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || |||||||| Sbjct 328658 UUAGACU--AAAAUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAG 328740 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 | || | || | || | ||||||||| || ||| | ||||||||||| || || |||||| |||| ||||| ||||| Sbjct 328741 ACCAUAGACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCA 328825 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 328826 GGUAAGUAU 328834 >> URS00023ED959_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001487) E-value: 4e-21 Identity: 74.86% Query coverage: 87.68% Gaps: 1.68% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAG 109 ||| | | || | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || |||||||| Sbjct 261587 UUAGACU--AAAAUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAG 261669 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 | || | || | || | ||||||||| || ||| | ||||||||||| || || |||||| |||| ||||| ||||| Sbjct 261670 ACCAUAGACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCA 261754 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 261755 GGUAAGUAU 261763 >> URS00019A2B86_85681 Citrus clementina U1 spliceosomal RNA E-value: 9.2e-21 Identity: 80.50% Query coverage: 77.83% Gaps: 0.63% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG-AGAUGGUAAGCCAGCGCACCCACCAAG 134 |||||||||||||||| ||||| || |||||||||||||||| ||| |||||| ||| || || || | ||||| ||||| Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCAACCACUUUGGGCUGACCUUAGGCGGGUGCACCUCCCAAG 93 Query 135 UGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| |||||| | ||||||||||| |||||||||||| | || |||||||||||||||||||| Sbjct 94 UGCAAUGGAGGCCACCAACCUAGGCCAUGGGCCUUCAUGAUCGCCGAUUGACCCCGUCCAGGUAAGUAU 162 >> URS00019A2A1F_85681 Citrus clementina U1 spliceosomal RNA E-value: 1e-20 Identity: 78.88% Query coverage: 79.31% Gaps: 2.48% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 |||||||||||||||| | ||||| || |||||||||||||||| |||||||||||||||||| || | | | | ||| Sbjct 1 GCAGGGGCCGCGCGAAUGUAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACCUUAGGGCGGUGUU----CCA 86 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||||| | ||||| | ||||||||||| ||||| ||||| |||| ||||||| |||||||||||| Sbjct 87 AGUGCAAUGAGAGCCACCAUCCUAGGCCAUGGGCCUUCUUGAUCCCCCAUUGACCCCGCCCAGGUAAGUAU 157 >> URS0000CFF8B4_3702 Arabidopsis thaliana (thale cress) ATSL294030 E-value: 1.1e-20 Identity: 73.08% Query coverage: 87.68% Gaps: 2.75% Alignment: Query 25 UUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUA 115 ||| | | || | ||| |||| |||||||||||| |||||||| |||||||| |||||| |||||||||||||||||| || Sbjct 68 UUUCAUGUAAAAAGAAUGGUAGGGACCGCGCGAACGCAGGCCCCCUCUGCCACAAAUAAUGACGCAGGCUCUCCCACUUGGGGAGACCUUA 158 Query 116 AGCCAGCGCAC----CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||| | |||| || | |||||||| || ||||||||||||||| ||| ||||| | ||||||||||||||||||| Sbjct 159 AGCUAA-GCACCCCUCCGUUAUGUGCAAUGGAGGUCACUAGCCUAGGCCACUCGUCUUAUUGAUCACAAGUUGACCCCGUCCAGGUAAGUA 248 >> URS000242ECAF_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC004981) E-value: 1.2e-20 Identity: 73.91% Query coverage: 88.67% Gaps: 2.17% Alignment: Query 24 AUUUAAAUUUGAAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU-UGGGGA 108 | | | | | ||||| ||| |||||||||||||||| ||||||| |||||||||||||| |||| |||| | || | Sbjct 16672 UUGUUGAACUAAGGAAUUGGGCGGGGGCCGCGCGAACGCAGGCCCCCUCAGGAACAAAUUAUGACGUAGGCUCUUUCACUGUAGGAA 16758 Query 109 GAUGGUAAGCCAGCGCAC--CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 || ||| |||| | | ||| | |||||||| || |||| |||||||||||| || | ||||| ||||| |||||||||| Sbjct 16759 GACCUUAAAACAGCACCCCUCCAGUAUGUGCAAUGGAGGUCACUGAUCUAGGCCAUGACUCUGCUUGAUCAGCCAUUGACCCCGUCC 16845 Query 194 AGGUAAGUAU 203 |||||||||| Sbjct 16846 AGGUAAGUAU 16855 >> URS0002354C5D_81985 Capsella rubella (C. rubella) long non-coding RNA (CRUB_LNC004625) E-value: 1.5e-20 Identity: 72.11% Query coverage: 91.63% Gaps: 4.21% Alignment: Query 17 GAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 102 || || |||||| | || ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | Sbjct 19265 GAUGAAGAUUUAAGACUA---AAAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCA 19347 Query 103 UGGGGAGAUGGUAAGCCAGCGCACC----CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAG 184 |||| ||| ||||| | ||||| | | |||||||| || ||||||||||||||| |||| ||||| | | Sbjct 19348 UGGGAAGACCUUAAGCUAA-GCACCCCUCCGUAAUGUGCAAUGGAGGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCACGAGUUG 19432 Query 185 ACCCCGUCCAGGUAAGUA 202 |||||||||||||||||| Sbjct 19433 ACCCCGUCCAGGUAAGUA 19450 >> URS0002360D1F_264402 Capsella grandiflora (C. grandiflora) long non-coding RNA (CGRA_LNC001402) E-value: 1.5e-20 Identity: 72.11% Query coverage: 91.63% Gaps: 4.21% Alignment: Query 17 GAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 105 || || |||||| | || ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | ||| Sbjct 123 GAUGAAGAUUUAAGACUA---AAAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAUGG 208 Query 106 GGAGAUGGUAAGCCAGCGCACC----CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 | ||| ||||| | ||||| | | |||||||| || ||||||||||||||| |||| ||||| | ||||||| Sbjct 209 GAAGACCUUAAGCUAA-GCACCCCUCCGUAAUGUGCAAUGGAGGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCACGAGUUGACCCCG 296 Query 191 UCCAGGUAAGUA 202 |||||||||||| Sbjct 297 UCCAGGUAAGUA 308 >> URS00025DB433_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.5e-20 Identity: 85.83% Query coverage: 62.56% Gaps: 0.00% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGC 137 ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||| | |||| ||| |||||||||||| Sbjct 2 GGGCCGCGCGAACAUGUACCCCCUCUACCACAAAUUAUGACGUUCACUCUUCCACUUGGGAAGAUGAUGGGCCAACGCGCCCACCAAGUGC 92 Query 138 AAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUG 173 ||||||||||| | || |||||| | ||||| || Sbjct 93 AAUGUGGGCCAUUGACCCAGGCCACGGGCCUUCGUG 128 >> URS0000A69F09_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 2.3e-20 Identity: 79.11% Query coverage: 77.83% Gaps: 0.63% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG 136 |||||||||||||||| | ||| |||||||||||||||| || |||||| ||||| ||||| || ||| || | || | ||||| Sbjct 4 GGGGCCGCGCGAACGCAGGC-CCCACUACCACAAAUUAUGAUGUAGGCUCUCCUACUUGAGGAGACCUUAGGCCUGCACCCCUCCAAAGUG 93 Query 137 CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||| || ||| | ||||||||||| ||||| ||||| |||| |||||| ||||||||||||| Sbjct 94 CAAUGGAGGUCACAAUCCUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 160 >> URS00019A2790_85681 Citrus clementina U1 spliceosomal RNA E-value: 2.6e-20 Identity: 80.00% Query coverage: 75.86% Gaps: 0.65% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU-GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCA 138 ||||||||||| ||||| || |||||||||||||||| ||| |||||| ||| || || || | ||||| ||||||||| Sbjct 8 ACGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCAACCACUUUGGGUUGACCUUAGGCGGGUGCACCUCCCAAGUGCA 97 Query 139 AUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||| |||||| | ||||||||||| |||||||||||| |||| |||||||||||||||||||| Sbjct 98 AUGGAGGCCACCAACCUAGGCCAUGGGCCUUCAUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 162 >> URS0000A2B30F_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 3.8e-20 Identity: 77.36% Query coverage: 78.33% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 |||||||||||||||| |||||||| ||||||||||||| || |||| ||||||| ||| || ||| | || | |||| Sbjct 3 GGGGGCCGCGCGAACGCAGGCCCCCUCUGCCACAAAUUAUGAUGUAGGCUCUAUCACUUGGACAGACCUUAGAAUAGCACCCCUCCUAAGU 93 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || ||||| ||||||||||| ||||| ||||| |||| |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCACUACCCUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS00023C030F_180498 Jatropha curcas (J. curcas) long non-coding RNA (JCUR_LNC001971) E-value: 3.9e-20 Identity: 76.05% Query coverage: 81.77% Gaps: 1.20% Alignment: Query 38 AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUGGGGAGAUGGUAAGCCAGCGCA 125 | | ||||||||||||||||| ||||| || |||||||||||||||| ||||||| ||||||||||| || || || | Sbjct 132 AUAGGACAGGGGCCGCGCGAACGUAGGCCCCCACUUCCACAAAUUAUGACGUAGGCUCUCCCAACUUGGGGAGACCUUAGACCGGCACC 220 Query 126 CCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | | |||||||||| || ||||| |||| |||| ||| | |||||| |||| || ||||||||||||||||| Sbjct 221 -CUCCUAAGUGCAAUGGAGGUCACUAAUCUAGACCAUAGGCCUACUUGAUCGCCCAUUGAUCCCGUCCAGGUAAGUAU 297 >> URS000241642D_180498 Jatropha curcas (J. curcas) long non-coding RNA (JCUR_LNC001192) E-value: 6.1e-20 Identity: 72.45% Query coverage: 95.07% Gaps: 3.06% Alignment: Query 3 CUGCAAAAUCCAAGGAGCAAAA---UUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAU 84 || ||| ||||| | | ||| || | | || ||| |||||||||||||||||| ||||| || |||||||||| Sbjct 16135 CUUGAAAGUCCAACAACCUAAACCAUUCAGAC---UAGUCUUGACAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAC 16216 Query 85 GACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUU 169 ||||| |||||||||||||||||| || | | || | || | ||||||||| || | ||| |||||||||| |||| Sbjct 16217 GACGUAGGCUCUCCCACUUGGGGAGACCUUAGGACGGCACCCCUUCAGAGUGCAAUGAAGGUCGCUAACCUAGGCCAUAGGCCUU 16301 Query 170 CAUGAUCGGCCAUAGACCCCGUCCAG 195 ||||| |||| |||||||||||| Sbjct 16302 AUUGAUCACCCAUCGACCCCGUCCAG 16327 >> URS00023B3526_3988 Ricinus communis (castor bean) long non-coding RNA (RCOM_LNC001732) E-value: 4.5e-25 Identity: 77.05% Query coverage: 90.15% Gaps: 1.64% Alignment: Query 21 AAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU 111 || |||| | ||| | || | ||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||||||| Sbjct 125 AAG-UUUAGAAUUG--GCAUGGAAAGGGGCCGCGCGAACGCAGGCCCCCACUGUCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGAC 212 Query 112 GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || || | ||| | | |||||||||| | ||| |||||||||||| | ||| |||||| |||| ||||||||||||||||||| Sbjct 213 CUUAGGCAGGUGCAUCUCCUAAGUGCAAUGGAGACCAACUACCUAGGCCAUGAACAUUCUUGAUCGCCCAUUGACCCCGUCCAGGUAAGUA 303 Query 203 U 203 | Sbjct 304 U 304 >> URS0000A73A73_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 1.5e-19 Identity: 77.36% Query coverage: 78.33% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 ||||||||||||||||| ||||| |||||||||||||||| || |||| |||||||| ||| ||| ||| | || | |||| Sbjct 3 AGGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUAUGAUGUAGGCUCUGCCACUUGGACAGACCUUAAAGAAGCACCCCUCCUAAGU 93 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || |||| ||||||||||| |||| |||| |||| |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCACUCCCCUAGGCCAUGGACCUUAUUGAUUAUCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS00019BAA19_3755 Prunus dulcis sRNA ncRNA E-value: 1.7e-19 Identity: 74.85% Query coverage: 81.77% Gaps: 0.60% Alignment: Query 25 UUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU-UGGGGAGAUGGU 114 | ||| ||||||| ||||||||||||| |||| ||||| | | |||||||||||||| |||||| || || ||||| | Sbjct 227 AGUUUGUUUAUAGAAUUGACAGGGGCCGCGCGGACGCAGGCCCCCACGGCAACAAAUUAUGACGUUGGCUCUCCUACAGUGAGGAGACCAU 317 Query 115 AAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 | || || | || | |||||||||| |||||| | |||||||||||| ||||| |||||| |||| ||||||| Sbjct 318 AGGCAGGCACCCCUCCUAAGUGCAAUGGAGGCCACCAACCUAGGCCAUGAGCCUUCUUGAUCGCCCAUUGACCCCG 393 >> URS0002197E17_158383 Olea europaea subsp. europaea non-coding RNA E-value: 1.8e-19 Identity: 75.15% Query coverage: 83.25% Gaps: 1.18% Alignment: Query 21 AAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 109 ||| | |||| |||| | |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| | Sbjct 222 AAAUUCUAAACUUGAU--UUGGGCAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGACGUAGGCUCGACCACUUGGGCCG 308 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCC 189 | || | |||| || | | |||||||| || | | | ||||||||||| ||||| ||||| |||| |||||| Sbjct 309 ACCUUAGACGGGCGCCCCUCCUAGGUGCAAUGGAGGUCGCCAAUCUAGGCCAUGAGCCUUCUUGAUCACCCAUUGACCCC 388 >> URS0002396AC0_37334 Citrus maxima (C. maxima) long non-coding RNA (CMAX_LNC001524) E-value: 2.1e-19 Identity: 76.33% Query coverage: 81.77% Gaps: 2.96% Alignment: Query 37 GAAUUGGCAG-GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCA 125 || ||| || || |||||||||| |||| ||||||||||||||||||| || ||||| | |||||||| || || || ||| Sbjct 288 GAGUUGCGAGGGGAUUGCGCGAACGCAGU-CCCCACUACCACAAAUUAUGACGUACAGUCUCC-UCAGAGGGAGAUGUUAGGCUAGUGCA 375 Query 126 C--CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | || ||||||||| ||||| ||||||||||||| ||||| ||||| |||| ||||||||||||||| ||| Sbjct 376 CAUCCCUUGAGUGCAAUGGAAGCCACAAGCCUAGGCCAUGGGCCUUCUUGAUCACCCAUCGACCCCGUCCAGGUAUGUA 454 >> URS00009EB43F_3981 Hevea brasiliensis miscellaneous RNA E-value: 2.3e-19 Identity: 73.30% Query coverage: 83.74% Gaps: 3.41% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA------CUCUCCCACUUG 104 |||| |||| | ||| | | || |||||||||||||| ||||| ||||||||||||||||||| |||||||||||| Sbjct 62 CAAAUUUUAGAAAUGAUACAGAGAUAGAGGCCGCGCGAACGCAGGCCCCCCCUACCACAAAUUAUGACGUAGGCUCUCCCUCUCCCACUUG 152 Query 105 GGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCC 189 |||||| || ||||| | || ||| |||||||| || |||| |||| |||||| || || |||||| ||||||| ||| Sbjct 153 GGGAGACCUUAGACCAGCACCCCUCCCAUGUGCAAUGGAGGUCACUCAUCUAGACCAUGAGCCCUCUUGAUCGCCCAUAGAUCCC 237 >> URS00021CB651_158383 Olea europaea subsp. europaea non-coding RNA E-value: 3.8e-19 Identity: 75.15% Query coverage: 81.28% Gaps: 1.21% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 | ||| || ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| || Sbjct 595 ACUUUUCAACUUGAA--UUUGGCAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGACGUAGGCUCGACCACUUGGGCCGA 681 Query 111 UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGAC 186 || | |||| || | |||||||||| | ||| | |||||||||| ||||| ||||| |||| ||| Sbjct 682 CCUUAGACAGGCGCCCCUCCUAAGUGCAAUGGAGAUCACCAAUCUAGGCCAUGGGCCUUCUUGAUCACCCAUUGAC 757 >> URS0002409CFB_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC002199) E-value: 1.2e-24 Identity: 76.09% Query coverage: 90.64% Gaps: 0.00% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 ||||| || ||| || | | |||||| |||||||||| ||||| ||||||||||||||||||| ||| ||||||||| || Sbjct 97 CAAAAGUUUGGAAUGAGGAUUGGAUAGGGGCUGCGCGAACGCAGGCCCCCGCUACCACAAAUUAUGACGUAGGCUCGACCACUUGGGUCGA 187 Query 111 UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || || ||| | || | |||||||||| || ||| ||||||||||||| ||| |||||| |||| |||||||||||||||||| Sbjct 188 CCUUAGGCUAGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUGGGUCUUUUUGAUCGCCCAUUGACCCCGUCCAGGUAAGU 278 Query 202 AU 203 || Sbjct 279 AU 280 >> URS00023CDD66_81985 Capsella rubella (C. rubella) long non-coding RNA (CRUB_LNC002097) E-value: 4.6e-19 Identity: 70.98% Query coverage: 91.13% Gaps: 5.70% Alignment: Query 18 AGCAAAAUUUAAAUUUGA-----AGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC 98 || || || ||| || | || | ||| |||||| ||||| |||| ||||||||| |||||||| |||||| |||| | Sbjct 28604 AGAAACGUUGAAAGUUAAAACUAAG-AAUGGUAGGGGCUGCGCGGACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUC 28688 Query 99 CACUUGGGGAGAUGGUAAGCCAGCGCACC---CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCA 181 | | ||| ||| ||||| ||||| | | ||||||||||| ||||||||||||||| |||| |||||| Sbjct 28689 CUCAAGGGAAGACCUUAAGCUUA-GCACCCCACGUUAUGUGCAAUGUGG-UCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAG 28772 Query 182 UAGACCCCGUCCAGGUAAGUA 202 | ||||||||||||||||||| Sbjct 28773 UUGACCCCGUCCAGGUAAGUA 28793 >> URS0000A1DEE2_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 5.1e-19 Identity: 76.73% Query coverage: 78.33% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 ||||||||||||||||| ||||| |||||||||||||||| || ||||| ||||||| ||| || ||| || | |||| Sbjct 3 AGGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUAUGAUGUAGACUCUAUCACUUGGACAGACCUUAGAGAAGCAGCCCUCCUAAGU 93 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || |||| ||||||||||| |||| ||||| |||| |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCACUCCCCUAGGCCAUGGACCUUAGUGAUCAUCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS000239B489_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC004136) E-value: 5.8e-19 Identity: 74.73% Query coverage: 90.15% Gaps: 2.69% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 105 || | |||| | | | ||||| || ||||||||||||||||| | ||| || |||||||||||||||| ||| |||||||| Sbjct 9580 GCUAUGUUUAGACU-AAGGAAUUGGGUAGGGGCCGCGCGAACGCAGGC-CCCACUGCCACAAAUUAUGACGUAGGCUCGGCCACUUGG 9665 Query 106 GGAGAUGGUAAGCCAGCGCACCC-ACCAAGUGCAAUGUGGGCCACUAG-CCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGU 191 || | || ||| | || | |||||||||| || |||||| || ||||||||| | ||| |||| | |||| |||||||| Sbjct 9666 ACCGACCUUGGGCUAGCACCCCUCCCGAAGUGCAAUGGAGGUCACUAGGCCCAGGCCAUGAGCUUUCUUGAUAGCCCAUUGACCCCGU 9753 Query 192 CCAGGUAAGU 201 |||||||||| Sbjct 9754 CCAGGUAAGU 9763 >> URS000240FDD9_4054 Panax ginseng (P. ginseng) long non-coding RNA (PGIN_LNC005046) E-value: 1.1e-20 Identity: 73.60% Query coverage: 87.68% Gaps: 1.69% Alignment: Query 25 UUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUA 115 || || || ||||| | ||||||||||||||| |||| ||| |||||||||||| || ||| ||||||||| ||| || Sbjct 238 GUUGAACUU---CAAUUGUUAAGGGCCGCGCGAACGCAGGCCCCAACUAUCACAAAUUAUGAUGUAGGCUCCACCACUUGGGUAGACCUUA 325 Query 116 AGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | ||| | || | |||||||||| | ||||| ||||||||||| || || ||||| |||| |||||| |||||||||||| Sbjct 326 GGAUAGCACCCCUCCAAAGUGCAAUGAAAGUCACUAACCUAGGCCAUGGGCCAUCUUGAUCACCCAUUGACCCCAUCCAGGUAAGUA 412 >> URS0000A2299B_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 8.4e-19 Identity: 75.95% Query coverage: 77.83% Gaps: 0.00% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG 136 ||||||||||||||| |||||||| ||||||||||||| || |||| ||||||| ||| || ||| | || | ||||| Sbjct 4 AGGGCCGCGCGAACGCAGGCCCCCUCUGCCACAAAUUAUGAUGUAGGCUCUAUCACUUGGACAGACCUUAGAAUAGCACCCCUCCUAAGUG 94 Query 137 CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||| || ||||| ||||||||||| |||| || || |||| |||||| ||||||||||||| Sbjct 95 CAAUGGAGGUCACUACCCUAGGCCAUGGGCCUUUUUGGUCACCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS0000D4061F_3702 Arabidopsis thaliana (thale cress) ATSL005080 E-value: 9.7e-19 Identity: 73.45% Query coverage: 85.22% Gaps: 2.82% Alignment: Query 30 AUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCA 120 | | ||| | ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | ||| ||| ||||| | Sbjct 7 ACUGGAACUAAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAAGGGAAGACCUUAAGC-A 96 Query 121 GCGCACCCACC----AAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||| | | |||||||| | ||||||||||||||| |||| |||||| | ||||||||||||||||||| Sbjct 97 UAGCACCCUUCCGGUAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCGUCCAGGUAAGUA 182 >> URS0002381B87_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC015721) E-value: 3.4e-28 Identity: 79.67% Query coverage: 89.16% Gaps: 0.55% Alignment: Query 21 AAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU-GGG 106 |||||| | ||| || | ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||| | | || Sbjct 92001 CAAAUUUUAGUUUAAAAACUUGGCAGGGGCCGCGCGAACGUGUACCCCCUCUAUCACAAAUUAUGACGUUCACUCUUUCUCAAAAGG 92087 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 |||||||| || | ||| ||| |||||||| | | |||| | ||||||||||| |||| ||||| |||||||||||||| Sbjct 92088 AAGAUGGUAGAUCAACACACUCACAAAGUGCAACGCGAGCCAUUGAUCUAGGCCAUGAGCCUUAUUGAUCACUCAUAGACCCCGUCC 92174 Query 194 AGGUAAGU 201 |||||||| Sbjct 92175 AGGUAAGU 92182 >> URS00021CF782_158383 Olea europaea subsp. europaea non-coding RNA E-value: 2.4e-18 Identity: 73.81% Query coverage: 82.76% Gaps: 0.00% Alignment: Query 23 AAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU 111 | ||| | | ||| | |||||||||||||||||||| ||||| ||||||||||||| ||||| ||| ||||||||| || Sbjct 589 AUUUUGUACUAACAGAUUGGGCAGGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUACGACGUAGGCUCGACCACUUGGGCCGAC 677 Query 112 GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || || || | || | |||||||||| | ||| | ||||||||||| ||||| ||||| |||| ||||||| Sbjct 678 CUUAGGCGGGCACCCCACCUAAGUGCAAUGGAAGUCACCAACCUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCG 756 >> URS0002423D8F_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC004134) E-value: 3.1e-23 Identity: 75.00% Query coverage: 90.15% Gaps: 0.54% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAG 109 |||| | | | | || | ||||||||| |||||||||| ||||| | | |||||||||||| | ||||||| || ||| |||| Sbjct 78 CAAAUUCAUAUUCUUUAGUUUGGGCAGGGGCUGCGCGAACGCAAGCCCCCACGGCAACAAAUUAUGACAUUGACUCUCCUACAUUGAGGAG 168 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 || || || || | || | ||||||||| || ||| |||| ||||||||| ||||| |||||| ||||||||| ||||||||||| Sbjct 169 AUCAUAGGCAGGCACCCCUUCAGAGUGCAAUGAAGGUCACCAGCCCAGGCCAUGAGCCUUCUUGAUCGCUCAUAGACCCUGUCCAGGUAAG 259 Query 201 UA 202 || Sbjct 260 UA 261 >> URS000237F1A5_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC001996) E-value: 1.9e-21 Identity: 72.63% Query coverage: 93.60% Gaps: 1.05% Alignment: Query 13 CAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 99 || | |||||| || | | || | ||||||||||||||||||| ||||| || ||||||||||||| || || || Sbjct 68990 AAAUAAAGAAAAUUAAACUCUUAA--UUGUGCAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGAUGUAGGUUCGACC 69074 Query 100 ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGAC 186 ||||||| || || | ||| | || | ||||||||| || ||||| |||||||||||| || || ||| | |||| ||| Sbjct 69075 ACUUGGGCCGACCUUAGGGUAGCACCCCUUCAGAGUGCAAUGAAGGUCACUAACCUAGGCCAUGAGCCAUCUUGACCACCCAUUGAC 69161 Query 187 CCCGUCCAGGUAAGUA 202 ||| |||||||||||| Sbjct 69162 CCCAUCCAGGUAAGUA 69177 >> URS000241158D_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC001996) E-value: 1.9e-21 Identity: 72.63% Query coverage: 93.60% Gaps: 1.05% Alignment: Query 13 CAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 99 || | |||||| || | | || | ||||||||||||||||||| ||||| || ||||||||||||| || || || Sbjct 13043 AAAUAAAGAAAAUUAAACUCUUAA--UUGUGCAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGAUGUAGGUUCGACC 13127 Query 100 ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGAC 186 ||||||| || || | ||| | || | ||||||||| || ||||| |||||||||||| || || ||| | |||| ||| Sbjct 13128 ACUUGGGCCGACCUUAGGGUAGCACCCCUUCAGAGUGCAAUGAAGGUCACUAACCUAGGCCAUGAGCCAUCUUGACCACCCAUUGAC 13214 Query 187 CCCGUCCAGGUAAGUA 202 ||| |||||||||||| Sbjct 13215 CCCAUCCAGGUAAGUA 13230 >> URS0000A19A08_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 3.5e-18 Identity: 74.21% Query coverage: 78.33% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 ||||| |||||||||| ||||| |||||||||||||||| || |||||| |||| ||||| || || | | | || | |||| Sbjct 3 AGGGGUUGCGCGAACGCAGGCCCCCGCUACCACAAAUUAUGAUGUAGGCUCUCCUACUUAAGGAGACCUUAGGCUAACACCCCUCCUAAGU 93 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || || | |||||||||| | |||||| |||| |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCAUCAAUCUAGGCCAUGGACUCAAAUGAUCAUCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS00023C2221_264402 Capsella grandiflora (C. grandiflora) long non-coding RNA (CGRA_LNC001402) E-value: 3.5e-18 Identity: 74.70% Query coverage: 79.80% Gaps: 3.01% Alignment: Query 41 UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC-- 127 ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | |||| ||| ||||| | ||||| Sbjct 1 UGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAUGGGAAGACCUUAAGCUAA-GCACCCC 88 Query 128 --CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | | |||||||| || ||||||||||||||| |||| ||||| | ||||||||||||||||||| Sbjct 89 UCCGUAAUGUGCAAUGGAGGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 165 >> URS0000A6E1C9_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 3.9e-18 Identity: 75.47% Query coverage: 78.33% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 ||||||||||||||||| ||| | |||||||||||||||| || |||| ||||||| ||| || ||| | | | |||| Sbjct 3 AGGGGCCGCGCGAACGCAGGCCCACACUACCACAAAUUAUGAUGUAGGCUCUGUCACUUGGACAGACCUUAGAAAAGCACCCUUCCUAAGU 93 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || |||| ||||||||||| |||| ||||| |||| |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCACUCCCCUAGGCCAUGGACCUUAUUGAUCAUCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS0000A35944_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 6.4e-18 Identity: 75.80% Query coverage: 77.34% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 |||| |||||||||||| |||| || |||||||| |||| || |||||||| | |||||| ||||| || | || | |||| Sbjct 2 AGGGACCGCGCGAACGCAGGUCCCCACUGCCACAAAUAAUGAAGUAGGCUCUCCCAUUAAGGGAGACCUUAAGCUUGCACCCCUCCAAAGU 92 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 |||||| ||||| || ||||||||| |||| |||||| |||| |||||| ||||||||||| Sbjct 93 GCAAUGGAAGCCACAGGCUUAGGCCAUGGACCUUAAUGAUCAUCCAUUGACCCCAUCCAGGUAAGU 158 >> URS0000E5EA63_3880 Medicago truncatula (barrel medic) ncRNA E-value: 5.8e-18 Identity: 75.80% Query coverage: 77.34% Gaps: 0.00% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG 136 |||||||||||||||| ||||| | | ||||||||||| || ||| |||||| || ||| || | ||| | || | ||||| Sbjct 5 GGGGCCGCGCGAACGCAGGCCCCCACAGCAACAAAUUAUGAUGUAGGCUCCACCACUUAGGUAGACCUUAGGAUAGCACCCCUCCAAAGUG 95 Query 137 CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||||| || |||| ||||||||||| ||||| ||||| |||| |||||| |||||||||||| Sbjct 96 CAAUGGAGGUCACUUUCCUAGGCCAUGGGCCUUCGUGAUCACCCAUUGACCCCAUCCAGGUAAGUA 161 >> URS000218749B_50452 Arabis alpina U1 spliceosomal RNA E-value: 7.2e-18 Identity: 75.46% Query coverage: 78.33% Gaps: 3.07% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACC-- 131 |||||| |||||||||| ||||||||| |||||||| | ||||| |||| ||||||||| ||| ||||| | |||||| | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAACGACGUAGGCUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUCCG 90 Query 132 --AAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | |||||||| | ||||||||||||||| |||| |||||| | ||||||||||||||||||| Sbjct 91 AUAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS00009C9405_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 7.8e-18 Identity: 75.47% Query coverage: 78.33% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 ||||||||||||||||| |||| ||| |||||||||||| || |||| |||||||| ||| || ||| | || | |||| Sbjct 3 AGGGGCCGCGCGAACGCAGGCCCCUACUAUCACAAAUUAUGAUGUAGGCUCUACCACUUGGAUAGACCUUAGAGAAGCACCCCUCCAAAGU 93 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||| || |||| |||||||||||| || | ||||| |||| |||||| ||||||||||||| Sbjct 94 GCAAUAGAGGUCACUCCCCUAGGCCAUGAGUCUACUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS00021871E0_50452 Arabis alpina U1 spliceosomal RNA E-value: 7.8e-18 Identity: 74.39% Query coverage: 78.82% Gaps: 3.05% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC----CA 129 |||||| |||||||||| |||||||| |||||||| |||||| |||| ||||||||| ||| ||||| | ||||| | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCGGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUCCU 90 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | |||||||| | ||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct 91 UUAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUUCUUCAUGAUCAAGAGUUGACCCCGUCCAGGUAAGUAU 164 >> URS0002187239_50452 Arabis alpina U1 spliceosomal RNA E-value: 8.1e-18 Identity: 74.39% Query coverage: 78.82% Gaps: 3.05% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC----CA 129 |||||| |||||||||| |||||||| ||||||||| |||||| ||| ||||||||| ||| ||||| | ||||| | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCGACCACAAAUAAUGACGCAGGUUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUCCU 90 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | |||||||| | ||||||||||||||| |||| |||||| | |||||||||||||||||||| Sbjct 91 UUACGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUUCUUCUUGAUCGAGAGUCGACCCCGUCCAGGUAAGUAU 164 >> URS0000A41445_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 8.6e-18 Identity: 75.00% Query coverage: 78.33% Gaps: 0.63% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 ||||| |||||||||| |||| || ||||||||||||| || |||||| ||||| ||||| || | | | || |||||| Sbjct 3 AGGGGUUGCGCGAACGCAGGCCCCUACUGCCACAAAUUAUGAUGUAGGCUCUCCUACUUGAGGAGACCUUAGAUUAACACCCCUCCCAAGU 93 Query 136 GCAAUGUGGGCCA-CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || || | | |||||||||| |||| |||||| |||| |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCAUCAAAUCUAGGCCAUGGACCUUAAUGAUCAUCCAUUGACCCCAUCCAGGUAAGUAU 162 >> URS00021871F2_50452 Arabis alpina U1 spliceosomal RNA E-value: 1e-17 Identity: 75.46% Query coverage: 78.33% Gaps: 3.07% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACC-- 131 |||||| |||||||||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||||| | |||||| | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUCCC 90 Query 132 --AAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | |||||||| | ||||||||||||||| |||||||||| | ||||||||||||||||||| Sbjct 91 AUAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCAUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS0002187390_50452 Arabis alpina U1 spliceosomal RNA E-value: 1e-17 Identity: 74.07% Query coverage: 77.83% Gaps: 3.09% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC----CA 129 |||||| |||||||||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||||| | ||||| | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGCUGGCUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUCCG 90 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | |||||||| | ||||||||||||||| |||| ||||| | |||||||||||||||||| Sbjct 91 UUAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUUUUCUUCUUGAUCAAGAGUUGACCCCGUCCAGGUAAGU 162 >> URS0002187163_50452 Arabis alpina U1 spliceosomal RNA E-value: 1.2e-17 Identity: 74.69% Query coverage: 77.83% Gaps: 3.09% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC----CA 129 |||||| |||||||||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||||| | ||||| | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUCCG 90 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | |||||||| | ||||||||||||||| |||| |||||| | |||||||||||||||||| Sbjct 91 UUAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCGUCCAGGUAAGU 162 >> URS00021876D2_50452 Arabis alpina U1 spliceosomal RNA E-value: 1.4e-17 Identity: 75.31% Query coverage: 77.83% Gaps: 3.09% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACC-- 131 |||||| |||||||||| ||||||||| |||||||| | ||||| |||| ||||||||| ||| ||||| | |||||| | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAACGACGUAGGCUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUCCG 90 Query 132 --AAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | |||||||| | ||||||||||||||| |||| |||||| | |||||||||||||||||| Sbjct 91 AUAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCGUCCAGGUAAGU 162 >> URS0000D29606_3702 Arabidopsis thaliana (thale cress) ATSL257800 E-value: 2e-17 Identity: 70.05% Query coverage: 87.68% Gaps: 5.88% Alignment: Query 25 UUUAAAUUUGAAGAAU-----UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 | | || | |||| | ||| |||||| |||||||||| ||||||||| |||||||| |||||| |||| || | |||| ||| Sbjct 104 UAUGAAGAUUAAGACUAAUGAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCUCAUGGGAAGA 194 Query 111 UGGUAAGCCAGCGCACC----CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGU 197 ||||| ||||| | | |||||||| | | ||||||||||||||| ||| ||||| | |||||||||||||| Sbjct 195 CCUUAAGCA-UAGCACCCCAGCGUUAUGUGCAAUGCG-GUCACUAGCCUAGGCCACUCGUCUUAUUGAUCACGAGUUGACCCCGUCCAGGU 283 Query 198 AAGUA 202 ||||| Sbjct 284 AAGUA 288 >> URS00021874AE_50452 Arabis alpina U1 spliceosomal RNA E-value: 2.6e-17 Identity: 74.23% Query coverage: 78.33% Gaps: 3.07% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC----CA 129 |||||| |||||||||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||||| | ||||| | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUCCU 90 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | |||||||| | ||||||||||||||| |||| ||||| | ||||||||||||||||||| Sbjct 91 UUAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS0000A0706E_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 3.8e-17 Identity: 73.78% Query coverage: 77.83% Gaps: 3.66% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCU------CUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCAC 130 ||||| |||||||||| ||||| |||||||||||||||| || |||| ||||||| ||| || ||| | || | Sbjct 4 GGGGCUGCGCGAACGCAGGCCCCCACUACCACUACCACAAAUUAUGAUGUAGGCUCUGUCACUUGGACAGACCUUAGAGAAGCACCCCUCC 94 Query 131 CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||||||| || |||| ||||||||||| ||||| ||||| |||| |||||| ||||||||||||| Sbjct 95 UAAGUGCAAUGGAGGUCACUCCCCUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 167 >> URS0000A5F3B8_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 6.7e-17 Identity: 74.21% Query coverage: 78.33% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 |||| | |||||||||| |||| ||||||||||||||| || ||||| ||||||||| ||| || | | | || | |||| Sbjct 3 AGGGACUGCGCGAACGCAAGCCCCUAUUACCACAAAUUAUGAUGUAGACUCUGCCACUUGGGCAGACCUUAGAGAAACACCCCUCCUAAGU 93 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || |||| |||||||||| | ||| ||||| |||| |||||| || |||||||||| Sbjct 94 GCAAUGGAGGUCACUCCCCUAGGCCAUAGGCAUUCUUGAUCACCCAUUGACCCCAUCUAGGUAAGUAU 161 >> URS00023F8E9B_157791 Vigna radiata (V. radiata) long non-coding RNA (VRAD_LNC009612) E-value: 5.2e-20 Identity: 74.10% Query coverage: 81.77% Gaps: 0.00% Alignment: Query 38 AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGC 124 | | | |||||| |||||||||| | |||||||| ||||||||||||| || |||| ||||| ||| ||| || |||| | Sbjct 2717 ACAUAGUAGGGGCUGCGCGAACGCAUGCCCCCUCUGCCACAAAUUAUGAUGUAGGCUCUGCCACUAGGGCAGACCUUAGAACAGCAC 2803 Query 125 ACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 || | |||||||| || ||| |||| |||||| |||| |||||| ||| |||||| ||||||||||||| Sbjct 2804 CCCUUCUUUGUGCAAUGAAGGUCACAGUUCUAGACCAUGAGCCUUUAUGAUCACUCAUUGACCCCAUCCAGGUAAGUAU 2882 >> URS00021874C4_50452 Arabis alpina U1 spliceosomal RNA E-value: 1e-16 Identity: 74.23% Query coverage: 78.33% Gaps: 3.07% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACC-- 131 |||||| ||||| |||| |||||||| |||||||| |||||| |||| ||||||||| ||| ||||| | |||||| | Sbjct 2 UAGGGGCUGCGCGGACGCAAACCCCCUCGGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUCUU 90 Query 132 --AAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||||||||| | ||||||||||||||| ||||| ||||| | ||||||||||||||||||| Sbjct 91 UAUAGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUCCUUCUUGAUCAAGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS00021CBAAA_158383 Olea europaea subsp. europaea non-coding RNA E-value: 1.1e-16 Identity: 72.35% Query coverage: 83.74% Gaps: 1.18% Alignment: Query 17 GAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU 103 | |||||||| || |||| | |||| ||||||||||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct 1185 GCACAAAAUUUCAACUUGAU--UUGGGCACGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGACAUAGGCUCAACCACUU 1269 Query 104 GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGAC 186 ||| || || | | | || | |||||||||| || | | | |||||||||| |||| |||||| |||| ||| Sbjct 1270 GGGCCGACCUUAGACGGACACCCCUCCUAAGUGCAAUGGAGGUCGCCAAUCUAGGCCAUGGGCCUUAUUGAUCGCCCAUUGAC 1352 >> URS000241F195_59689 Arabidopsis lyrata (A. lyrata) long non-coding RNA (ALYR_LNC001330) E-value: 1.4e-16 Identity: 71.93% Query coverage: 82.27% Gaps: 3.51% Alignment: Query 35 AAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCA 120 | || ||| |||||| |||||||||| ||||||||| |||||||| ||||| | |||| || | ||| ||| ||||| Sbjct 93517 AUUAAAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACAUAGGCUCUUCCUCAAGGGAAGACCUUAAGCA- 93601 Query 121 GCGCACC----CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||||| || | |||||||| | | ||||||||||||||| ||| |||||| | ||||| |||||||||||| Sbjct 93602 UAGCACCCCAACAGUAUGUGCAAUGCG-GUCACUAGCCUAGGCCACUCGUCUUAUUGAUCGCGAGUCGACCCUGUCCAGGUAAGU 93685 >> URS00019A27C3_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.5e-16 Identity: 76.58% Query coverage: 77.34% Gaps: 0.63% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU-UGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 |||||||||||||||| ||||| || |||||||||||||||| ||| ||||| |||| || || | | ||| | ||| | Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCGCUGCCACAAAUUAUGACGUAGGCUCAGCCACUAUGGGCUGACCUUAGGUGGGUGCAUCUCCCACG 93 Query 135 UGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||||||| | |||| | ||||||||||| ||| |||||| |||| ||||||||||||||||||| Sbjct 94 UGCAAUGGAGACCACCAACCUAGGCCAUGGGCCUGUUUGAUCGCCCAUCGACCCCGUCCAGGUAAGUA 161 >> URS0002364567_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC005302) E-value: 8.4e-23 Identity: 74.47% Query coverage: 90.64% Gaps: 2.13% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU-GGG 106 | ||| | | |||| |||| || ||||||||||||||||| ||||| || | |||||||||||||| |||||| |||| | | Sbjct 4782 UACAAUAUUGAACUGAAAAAUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCUCCUACUUUGAG 4870 Query 107 GAGAUGGUAAGCCAGCG--CACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 |||| || || | ||| | |||||||| || ||| | |||||||||||| ||| |||||| ||||| |||||||||| Sbjct 4871 GAGACCUUAGAGUGGCACCCUUCCAGUAUGUGCAAUGGAGGUCACCACUCUAGGCCAUGACUCUUUAUGAUCAGCCAUUGACCCCGUCC 4959 Query 194 AGGUAAGUAU 203 |||||||||| Sbjct 4960 AGGUAAGUAU 4969 >> URS000236A5AB_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC005301) E-value: 8.4e-23 Identity: 74.47% Query coverage: 90.64% Gaps: 2.13% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU-G 104 | ||| | | |||| |||| || ||||||||||||||||| ||||| || | |||||||||||||| |||||| |||| | Sbjct 61548 UACAAUAUUGAACUGAAAAAUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCUCCUACUUUG 61634 Query 105 GGGAGAUGGUAAGCCAGCG--CACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCC 189 ||||| || || | ||| | |||||||| || ||| | |||||||||||| ||| |||||| ||||| |||||| Sbjct 61635 AGGAGACCUUAGAGUGGCACCCUUCCAGUAUGUGCAAUGGAGGUCACCACUCUAGGCCAUGACUCUUUAUGAUCAGCCAUUGACCCC 61721 Query 190 GUCCAGGUAAGUAU 203 |||||||||||||| Sbjct 61722 GUCCAGGUAAGUAU 61735 >> URS0000CDE080_3702 Arabidopsis thaliana (thale cress) ATSL259430 E-value: 2.1e-16 Identity: 71.43% Query coverage: 84.24% Gaps: 3.43% Alignment: Query 32 UUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGC 122 | | | ||| |||||| |||||||||| ||||| ||| |||||||| ||||||| || || | ||| ||| || | || Sbjct 167 CUAAUUGAAUGGUAGGGGCUGCGCGAACGCAAACCCCUUCUGCCACAAAUAAUGACGUAGGAUCCUCCUCAAGGGAAGACCUUAGG-CAUA 256 Query 123 GCACCC--AC--CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||| || | |||||||| | | ||||||||||||||| ||| |||||| ||||||||||||||||||||| Sbjct 257 GCACCCCAACGGUAUGUGCAAUGCG-GUCACUAGCCUAGGCCACUCGUCUUGUUGAUCGCGAGUAGACCCCGUCCAGGUAAGUA 339 >> URS00024254E7_57918 Fragaria vesca (wild strawberry) long non-coding RNA (FVES_LNC001884) E-value: 2.1e-16 Identity: 73.13% Query coverage: 75.86% Gaps: 5.00% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACC------ACAAAUUAUGACGUCCACUCUCCCACUU 103 || |||| | || ||||| |||||| ||||| |||| ||||||| || |||||| ||||||| |||||||| ||| Sbjct 7952 AAUUUUAGAGACGA--AAUUGUAAGGGGCUGCGCGGACGCAAACCCCCUGGCCCCUGGCAACAAAUAAUGACGUAGACUCUCCCUCUU 8037 Query 104 GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAU 175 ||||||| ||||| ||| | || |||||||||||| || |||| |||||||||||| |||| ||| Sbjct 8038 GGGGAGACCUUAAGCGAGCACCCCUCCCAAGUGCAAUGGAGGUCACUUACCUAGGCCAUGAGUCUUCUCGAU 8109 >> URS0000A0A37D_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 2.7e-16 Identity: 72.78% Query coverage: 77.83% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 |||||| |||| ||||| |||| ||||||||||||||| || || | |||||||| | || | | | | || |||||| Sbjct 3 AGGGGCAGCGCAAACGCAGGUCCCCAUUACCACAAAUUAUGAUGUAGGCUUUGCCACUUGGACAAGCCUUAGGGUAACACCCCUCCCAAGU 93 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||| || | || ||||||||||| ||||| ||||| |||| |||||| |||||||| ||| Sbjct 94 GCAAUGGAGGUUAUUACCCUAGGCCAUGGACCUUCUUGAUCAUCCAUUGACCCCAUCCAGGUAUGUA 160 >> URS000240A861_3641 Theobroma cacao (cacao) long non-coding RNA (TCAC_LNC000106) E-value: 3e-16 Identity: 79.84% Query coverage: 63.55% Gaps: 0.00% Alignment: Query 75 CACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGAC 165 ||||||||||||||| |||||||||||||||||| || | ||||| | |||||||||| ||||| |||||||||||| Sbjct 2 CACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACCUUAGACAGAUGCACCACCGAAGUGCAAUGGAGGCCAUCUACCUAGGCCAUGAG 92 Query 166 CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||| |||||| |||| |||||||||||||||||||| Sbjct 93 CCUUUUUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 130 >> URS0000A76B77_3702 Arabidopsis thaliana (thale-cress) ncRNA (AT5G04445) E-value: 3.6e-16 Identity: 71.84% Query coverage: 83.74% Gaps: 3.45% Alignment: Query 33 UGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCG 123 || | ||| |||||| |||||||||| ||||||||| |||||||| || ||| |||| || | ||| ||| || | || | Sbjct 119 ACAAUGACUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUAACGCAGGCUCUUCCUCAAGGGAAGACCUUAGG-CAUAG 208 Query 124 CACCC--AC--CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||||| || | |||||||| | | ||||||||||||||| ||| |||||| | ||||||||||||||||||| Sbjct 209 CACCCCAACGGUAUGUGCAAUGCG-GUCACUAGCCUAGGCCACUCGUCUUAUUGAUCGCGAGUUGACCCCGUCCAGGUAAGUA 290 >> URS00023532DC_4039 Daucus carota (carrot) long non-coding RNA (DCAR_LNC003794) E-value: 9.2e-21 Identity: 76.65% Query coverage: 82.27% Gaps: 1.20% Alignment: Query 36 AGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGC 124 |||||| || ||| | |||||||||| ||| || |||||||||||| || |||| ||||||||| |||| || || ||| | Sbjct 5290 AGAAUU-GCGGGGACUGCGCGAACGCAAGU-CCCCCUGUCACAAAUUAUGAUGUAGACUCCACCACUUGGGUAGAUCUUAGGCGAGCAC 5376 Query 125 ACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || | ||||||||| || ||||| ||||||||||| ||||| ||||| |||| |||||| |||||||||||| Sbjct 5377 CCCUCCUCAGUGCAAUGGAGGUCACUAACCUAGGCCAUGGACCUUCUUGAUCAUCCAUUGACCCCAUCCAGGUAAGUA 5454 >> URS00023DFA3F_4039 Daucus carota (carrot) long non-coding RNA (DCAR_LNC003794) E-value: 9.2e-21 Identity: 76.65% Query coverage: 82.27% Gaps: 1.20% Alignment: Query 36 AGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGC 124 |||||| || ||| | |||||||||| ||| || |||||||||||| || |||| ||||||||| |||| || || ||| | Sbjct 5402 AGAAUU-GCGGGGACUGCGCGAACGCAAGU-CCCCCUGUCACAAAUUAUGAUGUAGACUCCACCACUUGGGUAGAUCUUAGGCGAGCAC 5488 Query 125 ACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || | ||||||||| || ||||| ||||||||||| ||||| ||||| |||| |||||| |||||||||||| Sbjct 5489 CCCUCCUCAGUGCAAUGGAGGUCACUAACCUAGGCCAUGGACCUUCUUGAUCAUCCAUUGACCCCAUCCAGGUAAGUA 5566 >> URS000218736F_50452 Arabis alpina U1 spliceosomal RNA E-value: 5e-16 Identity: 71.78% Query coverage: 78.33% Gaps: 3.07% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCC----A 129 |||||| ||||| |||| |||| |||| |||||||| |||||| |||| |||| |||| ||| || || |||||| Sbjct 2 UAGGGGCUGCGCGUACGCAAACCCUCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACAUGGGAAGACCUUAG-GCAUAGCACCCUUCCU 90 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | |||||||| | ||||||||||||||| |||||||||| | ||||||||||||||||||| Sbjct 91 UUAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCAUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS0000AE7DF4_3702 Arabidopsis thaliana (thale cress) miscellaneous RNA E-value: 7.2e-16 Identity: 74.70% Query coverage: 80.30% Gaps: 3.01% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCC- 128 | ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | ||| ||| ||||| | |||||| Sbjct 6 AAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAAGGGAAGACCUUAAGCUAA-GCACCCC 95 Query 129 --ACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || ||||||| | || ||||||||||||||| | || ||||| |||||||||||||||||||| Sbjct 96 AGACAAAGUGCAG-GCCGGUCACUAGCCUAGGCCACUCGUCAUCUUGAUCACGAGUAGACCCCGUCCAGGUAAGU 169 >> URS0002187112_50452 Arabis alpina U1 spliceosomal RNA E-value: 9.3e-16 Identity: 72.39% Query coverage: 78.33% Gaps: 3.07% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC----CA 129 |||||| ||||| |||| |||||||| |||||||| |||||| |||| || |||||| ||| ||||| | ||||| | Sbjct 2 UAGGGGCUGCGCGUACGCAAACCCCCUCGGCCACAAAUAAUGACGCAGGCUCUUCCGCUUGGGAAGACCUUAAGC-AUAGCACCCUUCCU 90 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | |||||||| | ||||||||||||||| |||| ||||| | ||||||||||||||||||| Sbjct 91 UUACGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUUCUUCUUGAUCAAGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS0002372D57_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC008983) E-value: 4.3e-22 Identity: 74.46% Query coverage: 90.64% Gaps: 1.09% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 | ||||| | |||| | | || |||| | |||||||||| ||| || |||||||||||||||| ||| |||||||| Sbjct 15279 AACAAUUUGACUUUGUA--UUGGGUAGGGACUGCGCGAACGCAGGACCCUGCUGCCACAAAUUAUGACGUAGGCUCAACCACUUGGA 15363 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 ||| || || || | || | |||||||||| || ||| | ||||||||||| ||||||||||| |||| |||||||||| Sbjct 15364 UAGACCUUAGGCAGGCACCCCACCAAAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCUUCAUGAUCACCCAUUGACCCCGUCC 15450 Query 194 AGGUAAGUAU 203 |||||||||| Sbjct 15451 AGGUAAGUAU 15460 >> URS0002373705_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001167) E-value: 2.6e-22 Identity: 74.18% Query coverage: 89.66% Gaps: 1.65% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 ||| || | ||||||||| |||||| |||||||||| |||| || | |||||||||||||| ||| |||||||| || Sbjct 4838 AAAAUU---GCUUAAGAAUUGGUAGGGGCUGCGCGAACGCAAGACCCCACUGCAACAAAUUAUGACGUAGGCUCGACCACUUGGAUCGA 4923 Query 111 UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 || | || | || | |||||||||| || ||| ||||||||||||| ||| |||||| |||| |||||||||||||||| Sbjct 4924 CCUUAGGUAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUGGGUCUUACUGAUCGCCCAUCGACCCCGUCCAGGUAA 5012 Query 200 GUAU 203 |||| Sbjct 5013 GUAU 5016 >> URS00023FFFEC_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001167) E-value: 2.6e-22 Identity: 74.18% Query coverage: 89.66% Gaps: 1.65% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 ||| || | ||||||||| |||||| |||||||||| |||| || | |||||||||||||| ||| |||||||| || Sbjct 4747 AAAAUU---GCUUAAGAAUUGGUAGGGGCUGCGCGAACGCAAGACCCCACUGCAACAAAUUAUGACGUAGGCUCGACCACUUGGAUCGA 4832 Query 111 UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 || | || | || | |||||||||| || ||| ||||||||||||| ||| |||||| |||| |||||||||||||||| Sbjct 4833 CCUUAGGUAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUGGGUCUUACUGAUCGCCCAUCGACCCCGUCCAGGUAA 4921 Query 200 GUAU 203 |||| Sbjct 4922 GUAU 4925 >> URS0000D217E7_3702 Arabidopsis thaliana (thale cress) ATSL007620 E-value: 2.8e-15 Identity: 75.00% Query coverage: 79.31% Gaps: 3.05% Alignment: Query 41 UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCC--- 128 ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | ||| ||| ||||| | |||||| Sbjct 3 UGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAAGGGAAGACCUUAAGCUAA-GCACCCCAG 92 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || ||||||| | || ||||||||||||||| | || ||||| |||||||||||||||||||| Sbjct 93 ACAAAGUGCAG-GCCGGUCACUAGCCUAGGCCACUCGUCAUCUUGAUCACGAGUAGACCCCGUCCAGGUAAGU 164 >> URS0000A1D536_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 3.5e-15 Identity: 72.33% Query coverage: 78.33% Gaps: 0.63% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 |||||| |||||||||| |||| |||||||||||||||| || ||| ||||||||| ||| || | ||| || |||| Sbjct 3 AGGGGCUGCGCGAACGCAA-GCCCCACUACCACAAAUUAUGAUGUAGGUUCUACCACUUGGGUAGACCUUAGGAAAGCAACCCUCUUAAGU 92 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| | ||| |||| | ||| |||| ||||| |||| |||||| ||||||||||||| Sbjct 93 GCAAUGAAUGUCACCCUCCUAUGUUAUGGACCUUAUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 160 >> URS00021876B7_50452 Arabis alpina U1 spliceosomal RNA E-value: 4.8e-15 Identity: 72.29% Query coverage: 78.82% Gaps: 4.22% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCA--CAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC---- 127 |||||| |||||||||| |||||||| |||| ||||| |||||| ||| ||||||||| ||| ||||| | ||||| Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCGACCACACAAAUAAUGACGCAGGUUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUC 90 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | | |||||||| | ||||||||||||||| |||| | | || | |||||||||||||||||||| Sbjct 91 CUUUACGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUUCUUCUUUAACGAGAGUCGACCCCGUCCAGGUAAGUAU 166 >> URS0000A61095_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 9.6e-15 Identity: 76.47% Query coverage: 67.00% Gaps: 0.00% Alignment: Query 68 CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGG 158 || |||||||||||||||| || |||||| ||||| ||||| || | | | | || |||||||||||| || || | ||||| Sbjct 4 CCGCUACCACAAAUUAUGAUGUAGGCUCUCCUACUUGAGGAGACCUUAGACUAACACCCCUUCCAAGUGCAAUGAAGGUCAUCAAUCUAGG 94 Query 159 CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||| |||| |||||| |||| |||||| ||||||||||||| Sbjct 95 CCAUGGACCUUAAUGAUCAUCCAUUGACCCCAUCCAGGUAAGUAU 139 >> URS0002397930_57918 Fragaria vesca (wild strawberry) long non-coding RNA (FVES_LNC001569) E-value: 1.5e-14 Identity: 76.51% Query coverage: 72.91% Gaps: 2.01% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC-CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAU 140 |||||| || |||| | |||||||||||| | || ||| | |||| ||||| ||||| ||| | || | ||||||||| Sbjct 25106 GAACGCAAAC-CCCUUGGCAACAAAUUAUGACAUAGGCUAUCCCCUCUUGAGGAGACCUUAAGCAAGCACCCCUCCAAAGUGCAAU 25190 Query 141 GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | || |||||||||||||||||| |||| |||| |||| |||||| ||||||||||||| Sbjct 25191 GGAGGUCACUAGCCUAGGCCAUGAGUCUUCU-UAUCGCCCAUUGACCCCAUCCAGGUAAGUAU 25252 >> URS0000A419AC_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 3.8e-14 Identity: 70.51% Query coverage: 76.85% Gaps: 0.00% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGC 137 | | |||| ||| | || || || ||||||||||||| || ||| ||||||| ||| ||| ||| || |||||||| Sbjct 4 GAGUUGCGCCAACACAGACUCCGACUUCCACAAAUUAUGAUGUAGGUUCUGUCACUUGGACAGACCUUAAAGCAGUAACCCUCCCAAGUGC 94 Query 138 AAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||| || || | |||||||||| |||| ||||| |||| |||||| |||||||||||| Sbjct 95 AAUGAAGGUCAUUGAUCUAGGCCAUGGACCUUUUUGAUCAUCCAUUGACCCCAUCCAGGUAAGUA 159 >> URS0002187396_50452 Arabis alpina U1 spliceosomal RNA E-value: 2.2e-13 Identity: 70.37% Query coverage: 77.83% Gaps: 3.09% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC----CCAC 130 ||||| ||| |||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||||| | |||| || Sbjct 3 UGGGGCUCCGCAUACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACUUUAAGCUAA-GCACCCUUCCUU 91 Query 131 CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | |||||||| | || |||| ||||||| |||| ||||| | |||||| |||||||||||| Sbjct 92 UAUGUGCAAUGGAAGUCAUUAGCAUAGGCCACUCGUCUUCCUGAUCACAAGUUGACCCCAUCCAGGUAAGUA 163 >> URS00023B41FB_157791 Vigna radiata (V. radiata) long non-coding RNA (VRAD_LNC009612) E-value: 3.7e-17 Identity: 69.10% Query coverage: 87.68% Gaps: 1.69% Alignment: Query 25 UUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU 111 ||||| || | | | |||||| |||||||| | |||||||| ||||| ||||||| || |||| ||||| || | | Sbjct 3948 GUUAAACUUUA---CAUAGUAGGGGCUGCGCGAACACAAGCCCCCUCUGCCACAGAUUAUGAUGUAGGCUCUGCCACUAGGNCANAC 4031 Query 112 GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUA 198 || |||| | || | |||||||| || ||| |||| |||||| |||| ||||| ||| |||||| |||||||| Sbjct 4032 CUUAGAACAGCACCCCUUCNUUGUGCAAUGAAGGUCACAGUUCUAGNCCAUGAGCCUUUNUGAUCACUCAUUGACCCCAUCCAGGUA 4118 Query 199 AGUA 202 |||| Sbjct 4119 AGUA 4122 >> URS0002413387_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC040421) E-value: 5.8e-13 Identity: 68.05% Query coverage: 82.76% Gaps: 1.78% Alignment: Query 34 GAAGAA-UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCG 123 | || | || || |||||||||||| | |||| || |||||||||||||| | ||| | ||||| | || || ||| Sbjct 750 UAGGAGUUGGGUAGAGGCCGCGCGAACACAGGCCCCUGCUGCCACAAAUUAUGACAUAGGCUCAACAUCUUGGAUCAACCUUAGGCAAGCA 840 Query 124 CACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | || | ||||||||| | ||| | |||| |||||| ||| |||||| || |||||| |||||||||| | Sbjct 841 CCCCUCCAUAGUGCAAUGGAAGUCACCAACCUAAGCCAUGGGUCUUAUUGAUCGCCC--AGACCCUGUCCAGGUAAAU 916 >> URS00023FF45F_130454 Arachis ipaensis (A. ipaensis) long non-coding RNA (AIPA_LNC000303) E-value: 6.6e-13 Identity: 73.72% Query coverage: 67.49% Gaps: 0.00% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 |||| |||||||||||||||| || ||| ||||||||| ||| || | || | | | |||||||| | ||| | || Sbjct 2 CCCCACUACCACAAAUUAUGAUGUAGGCUCCACCACUUGGGUAGACCUUAGACUGGCACCCUUCCUUGGUGCAAUGGAAGUCACCAACC 90 Query 155 UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||||||||| |||| |||||| |||| |||||| |||||||||||| Sbjct 91 UAGGCCAUGGGCCUUUAUGAUCACCCAUUGACCCCAUCCAGGUAAGUA 138 >> URS00024098B8_4155 Erythranthe guttata (spotted monkey flower) long non-coding RNA (EGUT_LNC002113) E-value: 1.1e-18 Identity: 72.00% Query coverage: 97.04% Gaps: 2.50% Alignment: Query 5 GCAAAAUCCAAGGAGCA-AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU 94 || |||| | || || ||||||||| | || ||| |||||||||||||||||||| ||||| | |||||| |||||| Sbjct 144 GCUAAAUUAAUGGGCCACAAAUUUAAAAUAGA--AAUGGGCAGGGGCCGCGCGAACGCAGGCCCCCACAGGAACAAAUAAUGACGGAGGAA 232 Query 95 CUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA--AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 | |||||||| || || | |||| || | | |||||||| || ||| |||||||||||| |||||| || || |||||| Sbjct 233 CAACCACUUGGAUCGACCUUAGUCACGCGCCCCUCCUAUUUGUGCAAUGGAGGUCACGUGCCUAGGCCAUGGCCCUUCUUGUUCAGCCAUA 323 Query 184 GACCCCGUCCAGGUAAGU 201 |||||| ||||||||||| Sbjct 324 GACCCCAUCCAGGUAAGU 341 >> URS00023BE117_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC004242) E-value: 2.4e-12 Identity: 67.08% Query coverage: 79.31% Gaps: 0.00% Alignment: Query 42 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCAC 130 | ||||| || | ||||| | ||||| ||||||||||||||| | | ||||||| | | || || | | || | Sbjct 1005 AGUAGGGGUUGCACUAACGCAAGUCUCCUCUGACACAAAUUAUGACGUAGGUUUUGUCACUUGGACAAACCUUAGAACAACACCCCUUC 1093 Query 131 CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||| || |||| ||||||||| |||| ||||| | || |||||||| |||||||||| Sbjct 1094 UGUGUGCAAUGAAGGUCACUCUUCUAGGCCAUAGGCCUUUCUGAUCACCUAUUGACCCCGUGCAGGUAAGUA 1165 >> URS000236433A_3880 Medicago truncatula (barrel medic) long non-coding RNA (MTRU_LNC005741) E-value: 1.9e-11 Identity: 74.80% Query coverage: 60.59% Gaps: 0.00% Alignment: Query 80 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACC 166 ||||||| || ||| ||||||| | ||| || ||| | || |||||||||||| |||||| |||||||||| | Sbjct 91786 AUUAUGAUGUAGGCUCCACCACUUGAGUAGACCUUAGAAAAGCACCCCUCCCAAGUGCAAUGGAGGCCACCUUUCUAGGCCAUGGGC 91872 Query 167 CUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| |||| |||||| |||||||||||| Sbjct 91873 CUUCAUGAUCACCCAUUGACCCCAUCCAGGUAAGUA 91908 >> URS0000A36134_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 3.7e-11 Identity: 67.53% Query coverage: 75.86% Gaps: 0.00% Alignment: Query 49 GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAA 139 | | |||||||| | || |||||| ||||||||| || || | ||||||||| | | || || | | | | | ||||| Sbjct 5 GUCAUGCGAACGCAGGCUUCCACUACCAUAAAUUAUGAUGUAGGCUUUGCCACUUGGGCAUACCUUAGUGCAACACUCUUCCUAUAUGCAA 95 Query 140 UGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || || ||||| |||||| ||| ||| |||| | |||| |||||| || |||||| || Sbjct 96 UGAAGGUCACUAUUCUAGGCAAUGGAUCUUUUUGAUUGCCCAUUGACCCCAUCUAGGUAAUUA 158 >> URS0000A2DB2E_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 5.5e-11 Identity: 68.59% Query coverage: 76.85% Gaps: 1.28% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGC 137 ||| | | ||||| ||| |||||||||||||||| || ||||||| || | | ||| || | | | | || |||||||| Sbjct 5 GGGUUGUGUGAACGUAGGUCCCUACUACCACAAAUUAUGAUGUAGACUCUCCUACCUAAGAAGACCCUAGACUAACACCCCUCCCAAGUGC 95 Query 138 AAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||| || || | |||| |||| | | |||||| |||| |||||| || ||||||||| Sbjct 96 AAUGGAGGUCAUAAAUCUAG--CAUGGAUCAUAAUGAUCAUCCAUUGACCCCAUCUAGGUAAGUA 158 >> URS000218758D_50452 Arabis alpina U1 spliceosomal RNA E-value: 5.5e-11 Identity: 71.53% Query coverage: 65.52% Gaps: 2.92% Alignment: Query 45 AGGGGCCGCGCGAACGCGU-ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAG---CGCACCCAC 130 |||||| |||||||||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||||| | | || Sbjct 3 AGGGGCUGCGCGAACGCAAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGCAUAUCACCCGUCCUU 92 Query 131 CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCG 177 ||||||||| | ||||||||||||||| |||| ||||| Sbjct 93 AUAGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUUCUUCUUGAUCA 139 >> URS00019A29E7_85681 Citrus clementina U1 spliceosomal RNA E-value: 9.2e-11 Identity: 63.10% Query coverage: 90.15% Gaps: 14.97% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGG 107 ||||| || || | |||||||||| | ||| ||||||||||||||| ||||||| ||||| Sbjct 3 GCAAAUAUUUCAUCUAAAGAAUUGGC------------------------CGCUAACACAAAUUAUGACGUAGGCUCUCCCUUACUGGGG 68 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGAC---CCCGUCCA 194 ||| || | ||| | |||||| ||| | | |||| | ||||||||||| |||| ||||| |||| ||| |||||| | Sbjct 69 AGACCUUAGAAUGGGGCAACUCCCAAGUACAACGGAGACCACCAACCUAGGCCAUGGGCCUUUCUGAUCACCCAUUGACCACCCCGUCUA 158 Query 195 GGUAAGU 201 ||||||| Sbjct 159 GGUAAGU 165 >> URS000235E82C_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 9.3e-11 Identity: 69.33% Query coverage: 80.30% Gaps: 0.61% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC 127 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | || | || Sbjct 4064 UUAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCC 4151 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | ||||||||| | || ||||||||| ||||| ||||| || ||||||| |||||||||| Sbjct 4152 CCGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 4225 >> URS00023BD4B5_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 9.3e-11 Identity: 69.33% Query coverage: 80.30% Gaps: 0.61% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC 127 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | || | || Sbjct 4069 UUAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCC 4156 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | ||||||||| | || ||||||||| ||||| ||||| || ||||||| |||||||||| Sbjct 4157 CCGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 4230 >> URS00023E6D5A_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 9.3e-11 Identity: 69.33% Query coverage: 80.30% Gaps: 0.61% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC 127 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | || | || Sbjct 4106 UUAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCC 4193 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | ||||||||| | || ||||||||| ||||| ||||| || ||||||| |||||||||| Sbjct 4194 CCGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 4267 >> URS00023E8EA6_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 9.3e-11 Identity: 69.33% Query coverage: 80.30% Gaps: 0.61% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC 127 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | || | || Sbjct 4064 UUAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCC 4151 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | ||||||||| | || ||||||||| ||||| ||||| || ||||||| |||||||||| Sbjct 4152 CCGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 4225 >> URS00023F6060_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 9.3e-11 Identity: 69.33% Query coverage: 80.30% Gaps: 0.61% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC 127 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | || | || Sbjct 4117 UUAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCC 4204 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | ||||||||| | || ||||||||| ||||| ||||| || ||||||| |||||||||| Sbjct 4205 CCGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 4278 >> URS000241BC92_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 9.3e-11 Identity: 69.33% Query coverage: 80.30% Gaps: 0.61% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC 127 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | || | || Sbjct 1665 UUAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCC 1752 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | ||||||||| | || ||||||||| ||||| ||||| || ||||||| |||||||||| Sbjct 1753 CCGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 1826 >> URS0002425FE4_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014892) E-value: 9.3e-11 Identity: 69.33% Query coverage: 80.30% Gaps: 0.61% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC 127 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | || | || Sbjct 2962 UUAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCC 3049 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | ||||||||| | || ||||||||| ||||| ||||| || ||||||| |||||||||| Sbjct 3050 CCGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 3123 >> URS00027F4F0D_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015032510.1) E-value: 1.4e-10 Identity: 65.41% Query coverage: 89.16% Gaps: 2.16% Alignment: Query 23 AAUUUAAAUUUGAAGAAUUGGCAGGGGC-CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGG 107 | || || | ||| || |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | |||||| Sbjct 1316 GACUUUUGUUACAGGAAAUGCCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGG 1403 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 | || | | | |||| | |||||||||||| | | || ||| || | ||| | ||||| |||| ||| Sbjct 1404 AAAUCGCAGGGGUCAGCACACCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCA 1491 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 1492 GGUAAGUAU 1500 >> URS000237C026_3888 Pisum sativum (pea) long non-coding RNA (PSAT_LNC004361) E-value: 2.2e-10 Identity: 64.71% Query coverage: 87.68% Gaps: 5.35% Alignment: Query 25 UUUAAAUUUGAA--GAAUUG-GCAGGGGCCGCGCGAACGCGUA---CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUGGGGA 108 | ||| ||||| |||| | ||| |||||||||||| ||| | || |||||||||| ||||| || || ||| ||| | Sbjct 271 U-AAAAAUUGAACUGAAUAAAGAGGGGUCCGCGCGAACGCAGGCGUCCCUCACUGCCACAAAUUACGACGUAGGUGCUACCAACUAGGGUA 360 Query 109 GAUGGUAAGCCAGCG--CACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGU 197 || || ||| | || | |||||||| | || || ||| |||||| ||| | ||||| ||| | |||||||||| Sbjct 361 GACCUUAGACCAAUUUCCUUCCUUUAUGUGCAAUGGAAGUCAUCAGUCUAAGCCAUGGGCCUGCUUGAUCACCCAAUAGCUCCGUCCAGGU 451 Query 198 AAGUA 202 | ||| Sbjct 452 AUGUA 456 >> URS00023F67F9_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC022809) E-value: 2.8e-10 Identity: 60.00% Query coverage: 89.16% Gaps: 23.50% Alignment: Query 23 AAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGA-ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 || | |||| || ||| || |||||| || |||||||| ||||||||||||| || Sbjct 1003 AAAUAGAAUUGUAAAUUUUGACAAGGGCCGGGCAUGGCGCGUACC-GCUCUACCACAAAUGAU-------------------------- 1064 Query 111 UGGUAAGCCAGCGCACCCACC-AAGUGCAAUGUGG-----------------GCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCA 181 | || ||||| ||||||| | ||||||||||||| |||| ||||||| |||| || ||||| ||| Sbjct 1065 -GAUAGGCCAGUGCACCCAACAAAGUGCAAUGUGGAUGACGGGCCUGGGUGGACCACGGGCCUAGGGCAUGGAUUUUGUUGAUCACCCA 1152 Query 182 UAGACCCCGUCCAGGUAAGUAU 203 |||||| ||||||||||||||| Sbjct 1153 UAGACCUCGUCCAGGUAAGUAU 1174 >> URS0002422A87_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC022805) E-value: 2.8e-10 Identity: 60.00% Query coverage: 89.16% Gaps: 23.50% Alignment: Query 23 AAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGA-ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 108 || | |||| || ||| || |||||| || |||||||| ||||||||||||| || Sbjct 56030 AAAUAGAAUUGUAAAUUUUGACAAGGGCCGGGCAUGGCGCGUACC-GCUCUACCACAAAUGAU------------------------ 56091 Query 109 GAUGGUAAGCCAGCGCACCCACC-AAGUGCAAUGUGG-----------------GCCACUAGCCUAGGCCAUGACCCUUCAUGAUCG 177 | || ||||| ||||||| | ||||||||||||| |||| ||||||| |||| || ||||| Sbjct 56092 ---GAUAGGCCAGUGCACCCAACAAAGUGCAAUGUGGAUGACGGGCCUGGGUGGACCACGGGCCUAGGGCAUGGAUUUUGUUGAUCA 56175 Query 178 GCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||||| ||||||||||||||| Sbjct 56176 CCCAUAGACCUCGUCCAGGUAAGUAU 56201 >> URS000234B3BA_157791 Vigna radiata (V. radiata) long non-coding RNA (VRAD_LNC016237) E-value: 8.7e-17 Identity: 69.89% Query coverage: 86.70% Gaps: 0.00% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 112 | | || ||||| | |||| ||||| |||| ||||| |||||||||||||||| || ||||| | | | |||| Sbjct 1114 UCAUUUUACUAGAAUAGAAGAGGGCUGCGCGGACGCAAGCCCCCACUACCACAAAUUAUGAUGUAGACUCUGCUCAUAGAACAGAUC 1200 Query 113 GUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 || | | || || | |||||||||| || || || ||||||| ||| |||| |||||| ||||| ||||| |||||||| Sbjct 1201 UUAGGAGAAUGCCCCUCCAAAGUGCAAUGGAGGUCAGUAUCCUAGGCGAUGGACCUUAUUGAUCGUCCAUACACCCCACCCAGGUAA 1287 Query 200 GU 201 || Sbjct 1288 GU 1289 >> URS0000A767AA_3702 Arabidopsis thaliana (thale-cress) ncRNA (AT1G06867) E-value: 5.6e-10 Identity: 61.49% Query coverage: 81.28% Gaps: 16.09% Alignment: Query 36 AGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA----CUCUCCCACUUGGGGAGAUGGUAAGCCAGC 122 | | || |||||| |||||||| | ||||| ||| ||||||| ||||||| || |||| ||||||||| |||| || || | Sbjct 79 AUAGAUGAUAGGGGCUGCGCGAACCCAAACCCCAUCUUCCACAAACAAUGACGUACAUAGGCUCUUCCACUUGGGAAGAUCUUAGGCUA-- 167 Query 123 GCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA-----GGUAAG 200 | | ||||||||||||||| ||| ||||| | ||| ||||||| |||||| Sbjct 168 -----------------AGCAAGUCACUAGCCUAGGCCACUCGUUUUCUUGAUCCUGAGUUGACUCCGUCCAGUCCAGGUAAG 233 >> URS000234D4FB_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC014675) E-value: 5.6e-10 Identity: 70.80% Query coverage: 67.49% Gaps: 3.65% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAG 152 | || | | | | ||||||||| ||||| ||||| ||||||| ||||| || | | | ||||||||| | ||| | Sbjct 14291 CUCCAGUGCAAUUAUUUAUGACGUAGACUCUUCCACU-GGGGAGACCUUAAGCUGGCACCUCUUCUAAGUGCAAUAAAAGUCACCAA 14376 Query 153 CCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||| |||| ||||| |||| ||| ||||||||| ||||||||| Sbjct 14377 CCUAGGUUAUGAGCCUUCUUGAU----CAUUGACCCCGUCUAGGUAAGUA 14422 >> URS00023F319C_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC004755) E-value: 9.1e-10 Identity: 66.03% Query coverage: 76.85% Gaps: 0.64% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACC 131 |||||||| | || || | | | || ||||||| |||| || ||| | ||||||| ||| |||||| | | | || Sbjct 9871 GGGGGCCGCACAAAUGCAGAUUCUCACUCUCACAAAUAAUGAUGUAGGCUCAACUACUUGGGCUGAUCUUAAGCCGGAUCCCUUCCC 9957 Query 132 AAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 ||||| |||| | ||| || ||| |||| |||||||||| | || | || ||||| |||| Sbjct 9958 AAGUGUAAUGAAAGUCACCAGUAGAGGGCAUGGGCCUUCAUGAUUUCCUAUUAA-CCAGUCCAAAUAAG 10025 >> URS00023798A7_3880 Medicago truncatula (barrel medic) long non-coding RNA (MTRU_LNC005856) E-value: 1e-9 Identity: 69.44% Query coverage: 70.94% Gaps: 3.47% Alignment: Query 60 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGC 146 || | |||| || | |||||||| || || |||| ||||||||| ||| ||||| ||| | || | | |||||||| || Sbjct 47413 GCAUGCCCCUACUGCAACAAAUUACGAUGUAAACUCCACCACUUGGGCAGACCUUAAGCUAGCACCCCUCCAAGGUGCAAUGGAGGU 47499 Query 147 CACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||| |||||| | ||| ||||| ||||| || || |||||||||||| Sbjct 47500 CACACGCCUAGACGAUGGGCCUUCUUGAUCAC-----AACACCUGCCAGGUAAGUAU 47551 >> URS00023903D5_3880 Medicago truncatula (barrel medic) long non-coding RNA (MTRU_LNC005858) E-value: 1e-9 Identity: 69.44% Query coverage: 70.94% Gaps: 3.47% Alignment: Query 60 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCA 148 || | |||| || | |||||||| || || |||| ||||||||| ||| ||||| ||| | || | | |||||||| || || Sbjct 4615 GCAUGCCCCUACUGCAACAAAUUACGAUGUAAACUCCACCACUUGGGCAGACCUUAAGCUAGCACCCCUCCAAGGUGCAAUGGAGGUCA 4703 Query 149 CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | |||||| | ||| ||||| ||||| || || |||||||||||| Sbjct 4704 CACGCCUAGACGAUGGGCCUUCUUGAUCAC-----AACACCUGCCAGGUAAGUAU 4753 >> URS00027EA41D_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015032510.1) E-value: 1.1e-9 Identity: 66.67% Query coverage: 83.74% Gaps: 2.30% Alignment: Query 34 GAAGAAUUGGCAGGGGC-CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCA 120 | ||| || |||||| |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | Sbjct 308 AAGGAAAUGCCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGU 397 Query 121 GCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||| | |||||||||||| | | || ||| | | | ||| | ||||| |||| |||||||||||| Sbjct 398 CAGCACACCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 481 >> URS00027F3CD7_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034730.1) E-value: 1.1e-9 Identity: 66.67% Query coverage: 83.74% Gaps: 2.30% Alignment: Query 34 GAAGAAUUGGCAGGGGC-CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCA 120 | ||| || |||||| |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | Sbjct 275 AAGGAAAUGCCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGU 364 Query 121 GCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||| | |||||||||||| | | || ||| | | | ||| | ||||| |||| |||||||||||| Sbjct 365 CAGCACACCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 448 >> URS0002376E1D_4155 Erythranthe guttata (spotted monkey flower) long non-coding RNA (EGUT_LNC000703) E-value: 2e-9 Identity: 61.62% Query coverage: 89.66% Gaps: 9.09% Alignment: Query 21 AAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC---CACUUGGG 106 ||| ||| || |||| | |||| || ||||||||| | || |||||| | ||||||||||| | | | | | | | Sbjct 6859 AAAUUUUGAACUUGAUUUA--UGCAGAGGUCGCGCGAACACAGGCCUCCUCUAACCCAAAUUAUGACUUAGGUUUUACGCAGAGGUCGC 6945 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAA-----------GUGCAA--UGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAU 182 | || | | ||| | | | | || || | | || | | ||||| || |||||| | || |||||| |||| Sbjct 6946 GCGAACGCAGGCCUCCUCUAACCCAAAUUAUGACUUAGGUUCGACUAGUUAGUCGCUAGCAUAAGCCAUGGACUUUAAUGAUCACCCAU 7034 Query 183 AGACCCCGUCCAGGUAAGUA 202 ||| ||||||||||||||| Sbjct 7035 UGACUCCGUCCAGGUAAGUA 7054 >> URS0000E8A71B_10103 Mus spicilegus (steppe mouse) lncRNA (ENSMSIG00000021399.1) E-value: 2.9e-9 Identity: 68.36% Query coverage: 83.74% Gaps: 4.52% Alignment: Query 34 GAAGAAUUGGCAGGGG-CCGCGCGAACGC-GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAG-- 117 | | || |||||| ||||||||||| | ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | | Sbjct 728 UACCAGUUAUCAGGGGAGCGCGCGAACGCAGCUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGG 817 Query 118 CCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||| ||||| | |||||||||| | | || ||| || | ||||||||||| |||| |||||||||||| Sbjct 818 UCAGCACACCC-CAAAGUGCAAUGGGUGAGCCUCGCCCUGGGAAAACCACCUUCAUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 903 >> URS0002187230_50452 Arabis alpina U1 spliceosomal RNA E-value: 4.1e-9 Identity: 66.87% Query coverage: 77.83% Gaps: 7.36% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUA-CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACC- 131 |||| |||||||||||| |||||||| |||||||| |||||| ||| ||| | || || ||||||| | Sbjct 2 UAGGGACCGCGCGAACGCAGGUCCCCUCUAGCCACAAAUAAUGACGCAGGUUCUUUA------AAAGACC-UUAGGCAUAGCACCCAACC 84 Query 132 ---AAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 |||||||| ||||||||||||||| |||| |||||| | |||||||||||||||||| Sbjct 85 UUAUUGUGCAAUGGAAAUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCGUCCAGGUAAGU 157 >> URS0002187585_50452 Arabis alpina U1 spliceosomal RNA E-value: 4.4e-9 Identity: 65.03% Query coverage: 78.33% Gaps: 6.75% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCC----A 129 |||||| |||||||||| |||||||| |||||||| |||||| ||| | ||| || | |||||| Sbjct 2 UAGGGGCUGCGCGAACGCAAGCCCCCUCUGCCACAAAUAAUGACGCAGGAUCUAUAA------AAGACCUUAG-GCGUAGCACCCUAACG 84 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | |||||||| | |||||||||| ||| | ||| ||||| | ||||||||||||||||||| Sbjct 85 UUAUGUGCAAUGGAAGUCACUAGCCUAAACCACUAGUCUUAUUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 157 >> URS00027EAEDA_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034730.1) E-value: 6.6e-9 Identity: 66.04% Query coverage: 76.35% Gaps: 2.52% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGC-CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGG 106 | || || | ||| || |||||| |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||| Sbjct 1325 UGACUUUUGUUACAGGAAAUGCCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGG 1412 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUC 176 || || | | | |||| | |||||||||||| | | || ||| || | ||| | ||||| Sbjct 1413 GAAAUCGCAGGGGUCAGCACACCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUC 1483 >> URS0002382DFB_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006979) E-value: 1e-8 Identity: 64.38% Query coverage: 78.82% Gaps: 16.88% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCC 128 ||| |||| || ||||| | | ||| || |||||||||||||||| | || || | || Sbjct 10023 GCA-GGGCUGCACGAACACAGGC-CCCACUGCCACAAAUUAUGACGU-------------------------AGGCGGGCACCCCU 10081 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||||| | ||| ||||||||||| ||||| ||||| |||| ||||| |||||||||||| Sbjct 10082 CCCAAGUGCAAUGGAAGUCACCGACCUAGGCCAUGGGCCUUCUUGAUCACCCAUUAACCCCAUCCAGGUAAGUA 10155 >> URS00027F849A_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015032613.1) E-value: 1.3e-8 Identity: 63.96% Query coverage: 93.60% Gaps: 3.55% Alignment: Query 14 AAGGAGCAAAAUUUAAAUUUGAAG---AAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 97 |||||| || | || ||| || | | |||||| |||||||||| ||||| ||||||||||||||| ||| | | || Sbjct 2965 AAGGAGAAACGUCUAUUUUUAAACCGCUAAAGUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUC 3052 Query 98 CC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAU 182 || | ||||||| || | | | |||| | ||||||||| || ||| | || | ||||||||||| Sbjct 3053 CCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCAUGAUCAUGGUA 3140 Query 183 AGACCCCGUCCAGGUAAGUAU 203 |||| |||||||||||| Sbjct 3141 UCUCCCCUGCCAGGUAAGUAU 3161 >> URS00027F0F42_10181 Heterocephalus glaber (naked mole-rat) lncRNA (ENSHGLG00000032664.1) E-value: 3.3e-8 Identity: 64.80% Query coverage: 86.21% Gaps: 2.23% Alignment: Query 29 AAUUUGAAGAAUUGGCAGGGGC-CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGG 113 | ||| ||| | |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | Sbjct 1207 UAACUGACAAAUCGCCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCG 1294 Query 114 UAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 | | |||| | ||||||||| || ||| | || | ||||| ||||| |||| ||||||||| Sbjct 1295 CAGGGGUCAGCACAUCCGGAGUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAG 1382 Query 201 UAU 203 ||| Sbjct 1383 UAU 1385 >> URS00023B1275_3711 Brassica rapa (field mustard) long non-coding RNA (BRAP_LNC004621) E-value: 7.4e-8 Identity: 71.90% Query coverage: 58.13% Gaps: 2.48% Alignment: Query 84 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCA-GCGCAC--CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCA 171 |||| ||||||| |||||||||| || || | |||| | || |||||||||| || ||||||||||||||| |||| Sbjct 3 UGACACAGGCUCUCCCGCUUGGGGAGACCUUAGGCUAAGCGCCCCUCCUUAAAGUGCAAUGGAGGUCACUAGCCUAGGCCACUCAUCUUCU 93 Query 172 UGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||||| | ||||| |||||||||||| Sbjct 94 UGAUCAUGAGUUGACCCUGUCCAGGUAAGU 123 >> URS00005495DF_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.4e-8 Identity: 65.41% Query coverage: 76.85% Gaps: 1.89% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | |||||||||| ||||| ||| ||||||||||| ||| | | ||| || ||||||| || | | | |||| | |||||| Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUAACACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCAAGU 95 Query 136 GCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| | | || ||| || | ||| | ||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS0000571B74_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e-7 Identity: 65.41% Query coverage: 76.85% Gaps: 1.89% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | |||| | ||| || Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCAGGU 95 Query 136 GCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| | | || ||| | | | ||| | ||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00009EE131_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 1.3e-7 Identity: 65.94% Query coverage: 67.98% Gaps: 0.00% Alignment: Query 65 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCU 155 ||| | ||||||||||||| || |||| | ||||| ||||| || | | | | || ||||||| | || | ||| Sbjct 23 UUCCCAUUGCCACAAAUUAUGAUGUAGGCUCUUCUACUUGAGGAGACCUUAGACAUACAUCUCUCCUAAUUGCAAUGGAAGUCAUCAACCU 113 Query 156 AGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||| || ||| | || | || ||| || |||| ||||||| Sbjct 114 AGGCCAUGGCCUUUCUUAAUUAUCUAUUGACUCCAUCCAAGUAAGUA 160 >> URS00021F0A53_8049 Gadus morhua (Atlantic cod) lncRNA (ENSGMOG00000031989.1) E-value: 1.4e-7 Identity: 63.68% Query coverage: 90.15% Gaps: 3.68% Alignment: Query 20 CAAAAUUUAAAUUUG---AAGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--U 102 |||||| | |||| | ||| |||||| |||||||||| ||||| ||||||||||||||| ||| | |||||| | Sbjct 1777 CAAAAUAUUUAUUUUCCACAAUAUUAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGAUUCCCACAUU 1865 Query 103 UGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || ||| | | | | |||| | |||||||||| | || ||| | || | ||||| ||||| |||| Sbjct 1866 UGAGGAAUUCGCACGGGUCAGCACAGCCGAAGUGCAAUGGCUGAGCCUCGCCCUGGGUGAACCACCUUCUUGAUCAUGGUGUCUCCCCU 1954 Query 191 UCCAGGUAAGUA 202 ||||||||||| Sbjct 1955 GCCAGGUAAGUA 1966 >> URS00021F454E_8049 Gadus morhua (Atlantic cod) lncRNA (ENSGMOG00000031989.1) E-value: 1.4e-7 Identity: 63.68% Query coverage: 90.15% Gaps: 3.68% Alignment: Query 20 CAAAAUUUAAAUUUG---AAGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--U 102 |||||| | |||| | ||| |||||| |||||||||| ||||| ||||||||||||||| ||| | |||||| | Sbjct 1873 CAAAAUAUUUAUUUUCCACAAUAUUAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGAUUCCCACAUU 1961 Query 103 UGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || ||| | | | | |||| | |||||||||| | || ||| | || | ||||| ||||| |||| Sbjct 1962 UGAGGAAUUCGCACGGGUCAGCACAGCCGAAGUGCAAUGGCUGAGCCUCGCCCUGGGUGAACCACCUUCUUGAUCAUGGUGUCUCCCCU 2050 Query 191 UCCAGGUAAGUA 202 ||||||||||| Sbjct 2051 GCCAGGUAAGUA 2062 >> URS0000556B1B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.5e-7 Identity: 65.41% Query coverage: 76.85% Gaps: 1.89% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | |||| | ||| || Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCACGU 95 Query 136 GCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| | | || ||| || | ||| | ||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUGCUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00019A28BA_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.5e-7 Identity: 68.79% Query coverage: 76.85% Gaps: 3.82% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA-CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 ||||| ||||||||| ||| |||| ||||||| ||| |||||| | |||||||||| || | || | ||| |||| Sbjct 5 GGGCCACGCGAACGCAAGCCC---CUACAACAAAUUGGAACGCAGGCUCUCCGAGCUUGGGGAGACCUUAGGGUAGUCCU-CCAAGAAGU 90 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||| || | |||||| ||||| |||| | ||| ||| |||||| ||||||| ||| Sbjct 91 GCAAUGGAGGG-GCAGCCCUAGGACAUGAGCCUUAGUCAUCACUCAUUGACCCCAUCCAGGUGAGUU 156 >> URS00004EFDDC_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.7e-7 Identity: 64.78% Query coverage: 76.85% Gaps: 1.89% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | ||||| |||| ||||| ||| ||||||||||| ||| | | ||| || ||||||| || | | | |||| | |||||| Sbjct 6 GAGAGCGCGUACGCAGUCCCCCACUAACACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACGCCAAGU 95 Query 136 GCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| | | || ||| | | | ||| | ||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS000196770F_9544 Macaca mulatta (Macaque) lncRNA (ENSMMUG00000065044.1) E-value: 2.8e-7 Identity: 64.67% Query coverage: 80.30% Gaps: 2.40% Alignment: Query 41 UGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCAC 126 | |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | | | |||| Sbjct 1208 AGCCAGGGGAAAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCAC 1296 Query 127 CCACCAAGUGCAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | ||||||||| || ||| || | ||||| ||||| |||| |||||||||||| Sbjct 1297 AUCCGGAGUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 1374 >> URS00005A5A3F_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.9e-7 Identity: 64.78% Query coverage: 76.85% Gaps: 1.89% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | |||||||||| ||||| ||| ||||||||||| ||| | | ||| || ||||||| || | | | |||| | || ||| Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUAACACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCUAGU 95 Query 136 GCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| | | || ||| | | | ||| | ||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS0001966DE8_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000041407.1) E-value: 3.2e-7 Identity: 65.88% Query coverage: 80.30% Gaps: 5.29% Alignment: Query 41 UGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAG--CCAGCGCA 125 | |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | | |||| || Sbjct 253 AGUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCCCA 342 Query 126 CCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCC--AUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | | ||||||||| || ||| || | ||||| ||||| | ||||| |||||||||||| Sbjct 343 UC--CGGAGUGCAAUGGAUAAGCCUCGCCCUGGGGGAAACCACCUUCGUGAUCAUGGAAUCACCCCUGCCAGGUAAGUAU 420 >> URS000279B583_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 9e-8 Identity: 63.39% Query coverage: 87.68% Gaps: 2.73% Alignment: Query 26 UUAAAUUUGAAGAAUUGGC-AGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAG 109 | |||||| ||||| ||||| |||||||||| ||||| |||||| |||||||| ||| | |||| | ||||||| Sbjct 1610 AUUUCUUUGAACAAUUGAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAGUCGAGAUUCCCACAUUUGGGGAA 1697 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGG 196 | | | | |||| | ||||||||| | || ||| | || | ||||| ||||| |||| ||||| Sbjct 1698 UUCGCAGGGGUCAGCACAACCGGAGUGCAAUGGCUGAGCCUCGCCCUGGGUGAACCACCUUCUUGAUCAUGGUAUCUCCCCUGCCAGG 1785 Query 197 UAAGUAU 203 ||||||| Sbjct 1786 UAAGUAU 1792 >> URS00003FE7E7_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.1e-7 Identity: 64.78% Query coverage: 76.85% Gaps: 1.89% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | ||||| |||| ||||| |||||||||||| || ||| | | ||| || ||||||| || | | | |||| | |||||| Sbjct 6 GAGAGCGCGGACGCAGUCCCCCACUACCACAAAUUUUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCAAGU 95 Query 136 GCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| | | || ||| || | ||| | ||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUGCUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS000195DF28_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000041407.1) E-value: 5e-7 Identity: 65.91% Query coverage: 83.25% Gaps: 5.11% Alignment: Query 35 AAGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UU-GGGGAGAUGGUAAG--C 118 | | || |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | || ||||| || | | | Sbjct 25 ACUAGUUAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGGAAAUCGCAGGGGU 114 Query 119 CAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||| || | | ||||||||| || ||| | || | ||||| ||||| | ||||| |||||||||||| Sbjct 115 CAGCCCAUC--CGGAGUGCAAUGGAUAAGCCUCGCCCUGGGGAAACCACCUUCGUGAUCAUGGAAUCACCCCUGCCAGGUAAGUAU 198 >> URS0000A0C4FD_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 5.4e-7 Identity: 64.97% Query coverage: 77.34% Gaps: 0.00% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG 136 | |||| | || | |||| ||| || ||||||| | || | |||| |||| |||||| ||| | | | | ||||||| Sbjct 4 GAGGCCAUACAAAUAUAUGACCCCACUAUCAUAAAUUAUAAUGUAGAUUCUCUUACUUUAGGAGAUCUUAAACUCACACCUCUCCCAAGUG 94 Query 137 CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||||| | || | ||||||||| | ||| |||||| |||| || || || | |||||| Sbjct 95 CAAUGAAAGUCAUCAAUCUAGGCCAUAAACCUAUAUGAUCAUCCAUUGAUCCUAUCUAAGUAAGUG 160 >> URS00019727A1_9823 Sus scrofa (pig) lncRNA (ENSSSCG00060017060.1) E-value: 6.9e-7 Identity: 64.38% Query coverage: 77.34% Gaps: 1.88% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| || || || || |||||||||| |||||||||| ||| | | |||||| ||||||| || | | | | || | | || Sbjct 358 GGGAAAGCUCGCACACGGUCCCCCUCUACUACAAAUUAUGCAGUCAAGUUUCCCACAUUUGGGGAAAUUGCAGGGGUCAGAACACCCGGAG 448 Query 135 UGCAAUGUGGGCCACUAGCCUAGGCCAUGAC-CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||| || | | ||| |||| || | | |||||| ||| ||| ||||||||||| Sbjct 449 UGCAUUGGGAGAGACUCGCCUUGGGAAAACCAUCUUCAUCAUCAAGGUAUCUUCCCUGCCAGGUAAGUA 517 >> URS0000552793_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.5e-7 Identity: 65.00% Query coverage: 77.34% Gaps: 1.88% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 || |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | |||| | || Sbjct 5 GGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAG 94 Query 135 UGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| || ||| | || | ||||||||||| |||| |||||||||||| Sbjct 95 UGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCAUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS0000306833_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.1e-7 Identity: 64.15% Query coverage: 76.85% Gaps: 1.89% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | ||||| |||| ||||| ||| |||||||| || ||| | | ||| || ||||||| || | | | |||| | |||||| Sbjct 6 GAGAGCGCGUACGCAGUCCCCCACUAACACAAAUUUUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACGCCAAGU 95 Query 136 GCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| | | || ||| | | | ||| | ||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS0000CCE1B8_10116 Rattus norvegicus uncharacterized LOC102548522 E-value: 1e-6 Identity: 63.98% Query coverage: 77.83% Gaps: 1.86% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | | |||| | | Sbjct 27 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGA 116 Query 134 GUGCAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||||| || ||| || | ||||| ||||| |||| |||||||||||| Sbjct 117 GUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 187 >> URS0000CCE7EB_10116 Rattus norvegicus uncharacterized LOC102548522 E-value: 1e-6 Identity: 63.98% Query coverage: 77.83% Gaps: 1.86% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | | |||| | | Sbjct 26 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGA 115 Query 134 GUGCAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||||| || ||| || | ||||| ||||| |||| |||||||||||| Sbjct 116 GUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 186 >> URS0000CCF3A1_10116 Rattus norvegicus uncharacterized LOC102548522 E-value: 1e-6 Identity: 63.98% Query coverage: 77.83% Gaps: 1.86% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACC 131 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | | |||| | Sbjct 1463 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCG 1550 Query 132 AAGUGCAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||||| || ||| || | ||||| ||||| |||| |||||||||||| Sbjct 1551 GAGUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 1623 >> URS0000CD00C2_10116 Rattus norvegicus uncharacterized LOC102548522 E-value: 1e-6 Identity: 63.98% Query coverage: 77.83% Gaps: 1.86% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | | |||| | | Sbjct 26 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGA 115 Query 134 GUGCAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||||| || ||| || | ||||| ||||| |||| |||||||||||| Sbjct 116 GUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 186 >> URS0000CD02C3_10116 Rattus norvegicus uncharacterized LOC102548522 E-value: 1e-6 Identity: 63.98% Query coverage: 77.83% Gaps: 1.86% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | | |||| | | Sbjct 27 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGA 116 Query 134 GUGCAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||||| || ||| || | ||||| ||||| |||| |||||||||||| Sbjct 117 GUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 187 >> URS0000B5A9DE_3981 Hevea brasiliensis miscellaneous RNA E-value: 1.1e-6 Identity: 64.74% Query coverage: 82.76% Gaps: 3.47% Alignment: Query 36 AGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCG 123 | ||| |||||| ||||| |||| ||||| |||||| |||||||| ||| | |||| | ||||||| | | | | | Sbjct 21 AUAAUGAUCAGGGGAGAGCGCGGACGCAGUCCCCCACUACCAGAAAUUAUGCAGUCGAGAUUCCCACAUUUGGGGAAUUCGCAGGGGUCAG 111 Query 124 CACCCACCAAGUGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||| | |||||||||| |||||| | ||| || | ||||| ||||| |||| |||||||||||| Sbjct 112 CACAACCGAAGUGCAAUGGCUGGGCCUC-GCCCUGGGUGAACCACCUUCUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 192 >> URS00027F8522_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015039313.1) E-value: 1.6e-6 Identity: 66.67% Query coverage: 67.49% Gaps: 2.84% Alignment: Query 40 UUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCAC 126 || |||||| |||||||||| ||| | ||||||||||||||| ||| | | ||| || ||||||| || | | | |||| Sbjct 566 UUACCAGGGGAGAGCGCGAACGCAGUCCCUCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCAC 655 Query 127 CCACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUC 176 | |||||||||||| | || ||| || | ||| | ||||| Sbjct 656 ACCCCAAGUGCAAUGGAUGGGCCUCGCCCUGGGAAAACCACCUGCUUGAUC 706 >> URS00021EE530_9541 Macaca fascicularis (Crab-eating macaque) lncRNA (ENSMFAG00000062077.1) E-value: 1.7e-6 Identity: 64.38% Query coverage: 70.44% Gaps: 2.05% Alignment: Query 36 AGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGC 122 | || | ||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | | | Sbjct 1195 ACAAAAGUCAGGGAAAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCA 1283 Query 123 GCACCCACCAAGUGCAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCGG 178 |||| | ||||||||| || ||| || | ||||| ||||| Sbjct 1284 GCACAUCCGGAGUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAU 1340 >> URS00022B36DA_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000076968.1) E-value: 2e-6 Identity: 63.92% Query coverage: 76.35% Gaps: 1.90% Alignment: Query 49 GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGC 137 || ||||||| ||||| |||||||||||| || || | | |||||| ||||||| |||| | | |||| | ||||| Sbjct 690 AAAGCACGAACGCAGUCCCCCACUACCACAAAUUGUGCAGUUGAGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCAGCACAUCCGGAGUGC 780 Query 138 AAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||| || ||| | || | ||||||||||| |||| |||||||||||| Sbjct 781 AAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCAUGAUCAUGAUAUCUCCCCUGCCAGGUAAGUAU 847 >> URS00004FB91C_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.9e-6 Identity: 64.15% Query coverage: 76.85% Gaps: 1.89% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | |||| | ||| Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGU 95 Query 136 GCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || ||| | || | ||||| ||||| |||| |||||||||||| Sbjct 96 GCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00004FB91C_10116 Rattus norvegicus (Norway rat) non-coding RNA E-value: 2.9e-6 Identity: 64.15% Query coverage: 76.85% Gaps: 1.89% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | |||| | ||| Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGU 95 Query 136 GCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || ||| | || | ||||| ||||| |||| |||||||||||| Sbjct 96 GCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS000007C241_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.8e-6 Identity: 64.38% Query coverage: 77.34% Gaps: 1.88% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 || |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| | | | | |||| | || Sbjct 5 GGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAGUUGGGGAACUCGCAUGGGUCAGCACAUCCGGAG 94 Query 135 UGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| || ||| | || | ||||||||||| |||| |||||||||||| Sbjct 95 UGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCAUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00021EE917_9103 Meleagris gallopavo (turkey) lncRNA (ENSMGAG00000022270.1) E-value: 4.8e-6 Identity: 63.69% Query coverage: 80.79% Gaps: 2.38% Alignment: Query 40 UUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACC 127 || |||||| |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | |||| Sbjct 379 AUGUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACA 469 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | | |||||| | | || ||| || | ||| | ||||| |||| |||||||||||| Sbjct 470 CCCGGAGUGCAUGGGAUGAGCCUCGCCCUGGGAAAACCACCUGCCUGAUCAUGGUGUCUCCCCUGCCAGGUAAGUAU 546 >> URS0002187493_50452 Arabis alpina U1 spliceosomal RNA E-value: 5.1e-6 Identity: 63.35% Query coverage: 77.83% Gaps: 6.21% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGC-CAGCGCACCCA--C 130 |||| |||||||||| | | |||||| |||||||| | || ||| ||| || || ||| ||| | | Sbjct 2 UAGGGACCGCGCGAACACAGAUCCCCUCAGCCACAAAUACUAACACAGGAUCUAUA-------AAGACCUUAGGCAUAGCACACUUAACC 84 Query 131 CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||||||||| | ||||||||||||||| |||| |||| | |||| ||||||||||||| Sbjct 85 UUAGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUAGAUCACGAGUUGACCUCGUCCAGGUAAGU 155 >> URS0000573EF2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.2e-6 Identity: 63.92% Query coverage: 76.35% Gaps: 1.90% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | |||| | ||| Sbjct 6 GAGAGCGCGAACGCAGCCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGU 95 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGA-CCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||| || ||| || | | ||||| ||||| | |||| ||||||||| | Sbjct 96 GCAAUGGAUAAGCCUCGCCCUGGGAAAGCCACCUUCGUGAUCAUGGAAUCUCCCCUGCCAGGUAAGGA 163 >> URS00023AB742_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC004242) E-value: 7.8e-6 Identity: 62.73% Query coverage: 79.31% Gaps: 1.24% Alignment: Query 42 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCAC 130 | ||||| || | ||| | | ||| | ||||||||| || ||| ||||||| | || || || | | || | Sbjct 942 AGUAGGGGUUGCACUAACACAAGUCUCCUAUGAUACAAAUUAUU--GUAGGUUCUGUCACUUGGACAAAUCUUAGAACAACACCCCUUC 1028 Query 131 CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | || ||||| | || | ||||||||| |||| |||| |||| |||||||| ||| |||||| Sbjct 1029 UAUGUCCAAUGAAAGUCAUUGCUCUAGGCCAUAGGCCUUUCAGAUCACCCAUUGACCCCGUGCAGAUAAGUA 1100 >> URS00019559EC_9544 Macaca mulatta (Macaque) lncRNA (ENSMMUG00000055356.1) E-value: 1.5e-5 Identity: 64.71% Query coverage: 73.40% Gaps: 3.92% Alignment: Query 28 AAAUUUGAAGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGG 113 || ||||| | |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | Sbjct 975 GAACCACAAGAA--GUCAGGGGAAAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCG 1061 Query 114 UAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUC 176 | | |||| | ||||||||| || ||| | | | ||||| ||||| Sbjct 1062 CAGGGGUCAGCACAUCCGGAGUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUC 1125 >> URS000195F489_158456 Betta splendens (Siamese fighting fish) lncRNA (ENSBSLG00000001132.1) E-value: 1.7e-5 Identity: 62.37% Query coverage: 86.21% Gaps: 9.68% Alignment: Query 28 AAAUUUGAAGAAUUGG-CAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU- 111 | |||||| | || |||||| |||||||||| ||||| |||||| |||||||| ||| | |||||| ||||||| | Sbjct 48 ACUUUUGAACACUUAAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAGUCGAGAUUCCCACAUUUGGGGAAUUC 136 Query 112 -----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 ||| || ||| | ||||||||| | || ||| | || | ||| ||||||| |||| ||| Sbjct 137 GCAGAGGUCAGACAG-------CCUCAGUGCAAUGGCUGAGCCUCGCCCUGGGUGAACCACCUACAUGAUCAUGGUAUCUCCCCUGCCA 218 Query 195 GGUAAGUA 202 |||||||| Sbjct 219 GGUAAGUA 226 >> URS0002351361_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001167) E-value: 2.6e-22 Identity: 74.18% Query coverage: 89.66% Gaps: 1.65% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 ||| || | ||||||||| |||||| |||||||||| |||| || | |||||||||||||| ||| |||||||| || Sbjct 6154 AAAAUU---GCUUAAGAAUUGGUAGGGGCUGCGCGAACGCAAGACCCCACUGCAACAAAUUAUGACGUAGGCUCGACCACUUGGAUCGA 6239 Query 111 UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 || | || | || | |||||||||| || ||| ||||||||||||| ||| |||||| |||| |||||||||||||||| Sbjct 6240 CCUUAGGUAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUGGGUCUUACUGAUCGCCCAUCGACCCCGUCCAGGUAA 6328 Query 200 GUAU 203 |||| Sbjct 6329 GUAU 6332 >> URS00023BA24C_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001167) E-value: 2.6e-22 Identity: 74.18% Query coverage: 89.66% Gaps: 1.65% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 112 ||| || | ||||||||| |||||| |||||||||| |||| || | |||||||||||||| ||| |||||||| || Sbjct 38 AAAAUU---GCUUAAGAAUUGGUAGGGGCUGCGCGAACGCAAGACCCCACUGCAACAAAUUAUGACGUAGGCUCGACCACUUGGAUCGACC 125 Query 113 GUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 || | || | || | |||||||||| || ||| ||||||||||||| ||| |||||| |||| |||||||||||||||||||| Sbjct 126 UUAGGUAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUGGGUCUUACUGAUCGCCCAUCGACCCCGUCCAGGUAAGUAU 216 >> URS00024185A0_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001167) E-value: 2.6e-22 Identity: 74.18% Query coverage: 89.66% Gaps: 1.65% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 ||| || | ||||||||| |||||| |||||||||| |||| || | |||||||||||||| ||| |||||||| || Sbjct 6198 AAAAUU---GCUUAAGAAUUGGUAGGGGCUGCGCGAACGCAAGACCCCACUGCAACAAAUUAUGACGUAGGCUCGACCACUUGGAUCGA 6283 Query 111 UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 || | || | || | |||||||||| || ||| ||||||||||||| ||| |||||| |||| |||||||||||||||| Sbjct 6284 CCUUAGGUAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUGGGUCUUACUGAUCGCCCAUCGACCCCGUCCAGGUAA 6372 Query 200 GUAU 203 |||| Sbjct 6373 GUAU 6376 >> URS00027F7B0D_10181 Heterocephalus glaber (naked mole-rat) lncRNA (ENSHGLG00100035968.1) E-value: 3.3e-5 Identity: 65.19% Query coverage: 65.02% Gaps: 2.22% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | | | |||| | | Sbjct 73 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGA 162 Query 134 GUGCAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCG 177 |||||||| || ||| || | ||||| ||||| Sbjct 163 GUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCA 207 >> URS000195F80A_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000041407.1) E-value: 3.8e-5 Identity: 63.16% Query coverage: 81.28% Gaps: 7.02% Alignment: Query 35 AAGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAA--GCC 119 | | || |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | | | Sbjct 267 ACUAGUUAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUC 356 Query 120 AGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC-CUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 ||| || || ||| | | | | || || || || | ||||| ||||| | ||||| |||| || Sbjct 357 AGCCCAUCCGGCAAUGGAUAAG----C--CUCGCCCUGGGGAAACCACCUUCGUGAUCAUGGAAUCACCCCUGCCAGUUAU 431 >> URS00001D4BE1_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.6e-5 Identity: 61.39% Query coverage: 75.86% Gaps: 2.53% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC---CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 | || |||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | |||| || Sbjct 6 GAGAGCAUGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCUCCAUUUGGGGAAAUUGCAGGGGUUAGCACAUCUGGAG 95 Query 135 UGCAAUGUGGGCCACUAGCCUAGGC-CAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 |||||| ||| ||| || | ||||||||||| |||| |||||||||| Sbjct 96 UGCAAUAGAUAAGACUCGCCCUGGGAAAACCACCUUCAUGAUCAUGGUAUCUCCCCUGCCAGGUAAGU 163 >> URS0001967D56_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005013713.1) E-value: 4.7e-5 Identity: 59.39% Query coverage: 77.83% Gaps: 7.27% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 ||| | || |||| || ||||| ||||||||||||||| ||| | | | | || ||||||| || | | | |||| | Sbjct 1630 GGGGACAGCACGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUCCCACAUUUGGGGAAAUCGCAGGAGUCAGCACAUCCGG 1718 Query 133 AGUGCAAUGUGGGCCACUAGCCUAG------GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||| || ||||| | | | || || ||||| |||| ||||||||||| Sbjct 1719 AGUGCAGUGGA-----UAAGCCUGGUGCUGGGAAAACCACCCUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUA 1789 >> URS00019A2998_85681 Citrus clementina U1 spliceosomal RNA E-value: 4.8e-5 Identity: 63.47% Query coverage: 81.77% Gaps: 9.58% Alignment: Query 36 AGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA-CUUGGGGAGAUGGUAAGCCAGCGC 124 ||||||||| ||| || || | ||| |||||||| | || |||||| | |||| | ||| | | || | | Sbjct 3 AGAAUUGGCUGGGCCCA----------UA--UUCCAUACAACAAAUUACAAGGUAGGCUCUCCUAGCUUGAGAAGACCUUGGGGCAUCCC 80 Query 125 ACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||| || ||||||| || || | || | ||||||||| ||||| |||| ||||||||||||| ||| Sbjct 81 U-CCAAGAAUUGCAAUGCAGGACAGU--UCUGGAUCAUGACCCUCAUUGAUCACUCAUACACCCCGUCCAGGUGAGU 154 >> URS00025EE840_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000058798.1) E-value: 4.9e-5 Identity: 59.39% Query coverage: 77.83% Gaps: 7.27% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| | || |||| || ||||| ||||||||||||||| ||| | | | | || ||||||| || | | | |||| | || Sbjct 788 GGGGACAGCACGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUCCCACAUUUGGGGAAAUCGCAGGAGUCAGCACAUCCGGAG 878 Query 135 UGCAAUGUGGGCCACUAGCCUAG------GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||| || ||||| | | | || || ||||| |||| ||||||||||| Sbjct 879 UGCAGUGGA-----UAAGCCUGGUGCUGGGAAAACCACCCUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUA 947 >> URS00022B6AE0_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000076968.1) E-value: 5.3e-5 Identity: 62.91% Query coverage: 72.41% Gaps: 2.65% Alignment: Query 32 UUGAAGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCC 119 | ||| | | |||| | || ||||||| ||||| |||||||||||| || || | | |||||| ||||||| |||| | | Sbjct 388 UGGAAUUACAGUCAGGAGAAAGCACGAACGCAGUCCCCCACUACCACAAAUUGUGCAGUUGAGUUUCCCACAUUUGGGGAAAUGGCAGGGG 478 Query 120 AGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCGG 178 |||| | ||||||||| || ||| || | ||||||||||| Sbjct 479 UCAGCACAUCCGGAGUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCAUGAUCAU 538 >> URS00019A2A7C_85681 Citrus clementina U1 spliceosomal RNA E-value: 7.3e-5 Identity: 62.65% Query coverage: 81.28% Gaps: 9.64% Alignment: Query 37 GAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA-CUUGGGGAGAUGGUAAGCCAGCGCA 125 ||||| || ||| |||| | ||| |||||||| | || |||||| | |||| | ||| | | || | | Sbjct 3 GAAUUAGCUGGGCCCGCA------------UUCCAUACAACAAAUUACAAGGUAGGCUCUCCUAGCUUGAGAAGACCUUGGGGCAUCCCU 80 Query 126 CCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||| || ||||||| || || | || | ||||||||| ||||| |||| ||||||||||||| ||| Sbjct 81 -CCAAGAAUUGCAAUGCAGGACAGU--UCUGGAUCAUGACCCUCAUUGAUCACUCAUACACCCCGUCCAGGUGAGU 153 >> URS000236BBCC_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC015037) E-value: 8e-5 Identity: 57.54% Query coverage: 84.73% Gaps: 5.59% Alignment: Query 30 AUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA-------G 109 | | |||||| | || || | | || | | | ||| ||||||||||||||| |||| |||||| || | Sbjct 10821 ACU--UAGAAUUUGAUAGGCCCAUGGGGACACAAAU-UCUGCUAUCACAAAUUAUGACGUAAGCUCUACCACUUAGGUCGAUCAUCG 10904 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGG 196 ||| |||| |||| | || | | | || | |||| | | || |||| ||||| || |||| | | ||| Sbjct 10905 AUGUUAAGAUGGCGCCUUUUCAAAACACCACGAAGGUCGUCCUCCUAAGUUACGAACCUUUUGGAUCGCUCAGAGACUUCAUUUAGG 10991 Query 197 UAAGU 201 ||| | Sbjct 10992 UAAAU 10996 >> URS0002337C39_9606 Homo sapiens (human) HSALNT0314337 E-value: 8.1e-5 Identity: 63.09% Query coverage: 71.43% Gaps: 2.68% Alignment: Query 32 UUGAAGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCC 119 || | || || |||||| | || || || |||| ||||||||||||||| ||| | | |||||| ||||||| || | | | Sbjct 698 UUUACAAAAUGCCAGGGGAGAGUGCAAAUGCAGUUCCCCAUUACCACAAAUUAUGAAGUCGAGUUUCCCACCUUUGGGGAAAUUGCAGGGA 788 Query 120 AGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAU-GACCCUUCAUGAUC 176 |||| | ||| ||||| | ||| ||| || | |||| ||||| Sbjct 789 UCAGCACAUCCAGAGUACAAUGGAGAAGACUCGCCCUGGGAAAACCACCUUUGUGAUC 846 >> URS0002345734_9606 Homo sapiens (human) HSALNT0314335 E-value: 8.1e-5 Identity: 63.09% Query coverage: 71.43% Gaps: 2.68% Alignment: Query 32 UUGAAGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAG 117 || | || || |||||| | || || || |||| ||||||||||||||| ||| | | |||||| ||||||| || | | | Sbjct 886 UUUACAAAAUGCCAGGGGAGAGUGCAAAUGCAGUUCCCCAUUACCACAAAUUAUGAAGUCGAGUUUCCCACCUUUGGGGAAAUUGCAGG 974 Query 118 CCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAU-GACCCUUCAUGAUC 176 |||| | ||| ||||| | ||| ||| || | |||| ||||| Sbjct 975 GAUCAGCACAUCCAGAGUACAAUGGAGAAGACUCGCCCUGGGAAAACCACCUUUGUGAUC 1034 >> URS00019779A8_9823 Sus scrofa (pig) lncRNA (ENSSSCG00045013540.1) E-value: 9.2e-5 Identity: 60.38% Query coverage: 77.34% Gaps: 1.26% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 ||| || || || || |||||||||| |||||||||| ||| | | | | || ||||||| || | | | | || | | ||| Sbjct 352 GGGAAAGCUCGCACACGGUCCCCCUCUACUACAAAUUAUGCAGUCAAUUUCCCACAUUUGGGGAAAUUGCAGGGGUCAGAACACCCGGAGU 442 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCA-UGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||| || | | || ||| | | |||||| ||| ||| ||||||||| | Sbjct 443 GCAUUGGGAGAGCCUCGCCCUGAGAAAACCAUCUUCAUCAUCAAGGUAUCUUCCCUGCCAGGUAAGCA 510 >> URS00009F15E0_3981 Hevea brasiliensis miscellaneous RNA E-value: 1.1e-4 Identity: 81.43% Query coverage: 34.48% Gaps: 0.00% Alignment: Query 33 UGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 102 | | ||||| ||||||||||||||||| ||||| || |||||||||||||||| |||||||||| Sbjct 215 AGUAAGAUUGGAAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUCCCACU 284 >> URS00022AFA7B_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000086245.1) E-value: 1.2e-4 Identity: 63.37% Query coverage: 82.76% Gaps: 2.91% Alignment: Query 36 AGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAG 121 ||||| ||||| |||||||||| ||||| |||||||| |||||| ||| | | |||||| ||||||| || | | | Sbjct 2105 AGAAUGAUAAGGGGAAAGCGCGAACGCAGUCCCCCACUACCACA-AUUAUGCAGUCAAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUC 2192 Query 122 CGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||| |||||||| || ||| | || | ||||| ||||| |||| |||||||||||| Sbjct 2193 AGCACAUCUGGAGUGCAAUAGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGCAUCUCCCCUGCCAGGUAAGUAU 2275 >> URS0000B22750_10116 Rattus norvegicus long non-coding RNA NONRATT000805.2 E-value: 2e-4 Identity: 62.96% Query coverage: 65.02% Gaps: 2.22% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| |||||||||| ||||| ||||||| ||||||| ||| | | |||| | ||||||| || | | |||| | | Sbjct 165 GGGAGAGCGCGAACGCAGUCCCCCACUACCACGAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCACAGGGGUCAGCACAUCCGGA 254 Query 134 GUGCAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCG 177 |||||||| || ||| || | ||||| ||||| Sbjct 255 GUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCA 299 >> URS00001C82F3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.2e-4 Identity: 61.68% Query coverage: 77.34% Gaps: 5.99% Alignment: Query 47 GGGCCGCGCGAACGCGUACCC-------CCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACC 127 || |||||||||| ||| || | |||||||| |||| ||| | | |||| | ||| ||| || | | | |||| Sbjct 5 GGAGAGCGCGAACGCAGUCCCCCCACCACCACCACCACAAACUAUGCAGUCGAGUUUCCCUAAUUUGAGGAAAUCGCAGGGGUCAGCACA 94 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | |||||||||||| | | || ||| || | ||| | ||||| |||| |||||||||||| Sbjct 95 CCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUGCUUGAUCAUGGUGUCUCCCCUGCCAGGUAAGUAU 171 >> URS0000AA251C_7955 Danio rerio (zebrafish) lncRNA CR385078.5 (ENSDARG00000096729.2) E-value: 2.4e-4 Identity: 63.19% Query coverage: 77.83% Gaps: 4.29% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAG--CCAGCGCACCCACCA 132 ||| |||||||||| ||||| |||||| |||||||| ||| | |||| | ||||||| | | | | ||||| | | Sbjct 26 GGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAGUCGAGAUUCCCACAUUUGGGGAAUUCGCAGGGGUCAGCGUGGC--CGG 114 Query 133 AGUGCAAUGUGGGCCACUAGC-CUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||||| || || || || | ||||| ||||| |||| |||||||||||| Sbjct 115 AGUGCAAUGGCCAAGCCUCGCCCUGGGUGAACCACCUUCUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 186 >> URS000017D295_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.6e-4 Identity: 61.25% Query coverage: 77.34% Gaps: 1.88% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 || ||| ||| || ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | | ||| | || Sbjct 5 GGAGAGCGUGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCUCAUUUGGGGAAAUCUCAGGGGACAGCAUAUCCAGAG 94 Query 135 UGCAAUGUGGGCCACUAGCCUAGGC-CAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | ||||| | || || || | ||||| ||||| |||| |||||||||||| Sbjct 95 UACAAUGGGUAAGUCUCACCCUGGAAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00000D11A2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.1e-4 Identity: 65.24% Query coverage: 77.83% Gaps: 5.49% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAG--CCAGCGCACCCACC 131 ||| | ||| ||| || ||||| ||||| | ||||||| ||| | | ||| || ||||||| || | | | |||| || | | Sbjct 4 GGGACAGCGAGAAUGCAGUCCCCCACUACCCCGAAUUAUGCAGUCUAGUUUCCUGCAGUUGGGGAAAUCGCAGGGGUCAGCACAUC--CA 91 Query 132 AAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCG-GCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||||| || ||| | || | ||||| |||| | ||| |||| |||||||||||| Sbjct 92 GAGUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUUAUGGCAU-CUCCCCUGCCAGGUAAGUAU 164 >> URS0000A846DF_10090 Mus musculus (mouse) predicted gene, 48281 E-value: 4.9e-4 Identity: 65.44% Query coverage: 65.02% Gaps: 3.68% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 ||| ||||||| || |||||| |||| |||||||||| ||| | | ||| ||||||| || || | | | |||| | Sbjct 22 GGGGAGAGCGCGAAUGCAGACCCCCACUACAACAAAUUAUGCAGUCGAGUUUCCCUCACUUGGAGAAAUCGCAGGGGUCAGCACAUCCGG 111 Query 133 AGUGCAAUGUGG--GCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||||||||| ||| | | ||| || | ||||| ||||| Sbjct 112 AGUGCAAUGGAUAAGCCUCGA-CCUGGGAAAACCACCUUCGUGAUC 156 >> URS00019A2677_85681 Citrus clementina U1 spliceosomal RNA E-value: 5e-4 Identity: 64.78% Query coverage: 77.83% Gaps: 4.40% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 ||| | ||||||||||| |||| | ||||||||| || || |||||| ||| |||| | || | ||| | ||| || Sbjct 2 CAGAGCUCGCGCGAACGCAGGCCCCA--UGUCACAAAUUACGAAGUAGGCUCUCCUUGCUUAGGGAAACCUUAGGGCAGUCCU-CCAACA 88 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||||||||| || || || | | || || || ||||| || || | | || |||||||| Sbjct 89 AGUGCAAUGCUGGACA--GCCCAAAGACACGAGACUCAUUGAUCACUUAUUGAAC-CAUCUAGGUAAGU 154 >> URS00019A29CF_85681 Citrus clementina U1 spliceosomal RNA E-value: 5.5e-4 Identity: 71.93% Query coverage: 55.17% Gaps: 5.26% Alignment: Query 90 CCACUCUCCCACUUGGGGAGAUGGUA-AGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCG 177 ||||||||||||| ||||| | | |||| | ||| |||||||||| || ||||| |||| ||||| |||| |||||| Sbjct 43 UCACUCUCCCACUUAAGGAGACCUUCGUGGCAGC-CUUCCAAGAAGUGCAAUGGAGGG---UAGCCUUAGGACAUGAGCCUUAAUGAUCA 128 Query 178 GCCAUAGACCCCGUCCAGGUAAGU 201 ||| ||||| || |||||||| Sbjct 129 CUCAUUAACCCCAUCUAGGUAAGU 152 >> URS000019840B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6e-4 Identity: 64.29% Query coverage: 67.49% Gaps: 2.14% Alignment: Query 65 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU-A 151 |||| ||||||||||||||| ||| | | ||| || ||||||| || | | | |||| |||||||||||| || | Sbjct 19 UCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCUGCAUUUGGGGAAAUCGAAGGGGUCAGCACAUCCCAAGUGCAAUGGAUAAGGCUCA 108 Query 152 GCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||| || | ||||| ||||| |||| |||||||||| Sbjct 109 CCCUGGGGAAAUCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGU 158 >> URS00025F2D8C_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000107581.1) E-value: 6.3e-4 Identity: 62.35% Query coverage: 77.83% Gaps: 3.09% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 ||| |||||||||| ||||| |||||| |||||||| || | | |||| ||||| | | | | | |||| | Sbjct 4949 GGGAGAGCGCGAACGCAGUCCCCCACUACCAUAAAUUAUGCAAUCGAGAUUUCCACAUUUGGGAAAUUCGCAGGGGUCAGCACAGCCGG 5037 Query 133 AGUGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||||| || ||| | ||| || | ||||| ||||| ||| |||||||||||| Sbjct 5038 AGUGCAAUGGCUGAGCC-UCACCCUGGGUGAACCGCCUUCUUGAUCACGGUAUCUCCCUUGCCAGGUAAGUAU 5109 >> URS000057882D_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.6e-4 Identity: 63.46% Query coverage: 73.89% Gaps: 5.13% Alignment: Query 52 GCGCGAACGCGUA--CCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA-GCCAGCGCACCCACCAAGUG 136 || ||| || ||||| ||| ||||||||||| ||| | | ||| || ||||||| || | | | |||| || ||| |||| Sbjct 10 GCUUGAAUGCACUCCCCCCCACUAUCACAAAUUAUGCAGUCGAGUUUCCAGCAUUUGGGGAAAUUGCAGGGUCAGCACAUCCA--GAGUG 97 Query 137 CAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||||| | | || ||| || | ||| | ||||| |||| |||||||||| Sbjct 98 CAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGU 163 >> URS0002866797_9913 Bos taurus (cattle) lncRNA (ENSBTAG00000061774.1) E-value: 6.7e-4 Identity: 61.15% Query coverage: 75.37% Gaps: 2.55% Alignment: Query 24 AUUUAAAUUUGAAGAAUUGGCAGG-GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU 111 ||| ||| || | | |||| || || |||||| || | |||| |||||||||| | | | | ||||| ||||||| || Sbjct 106 GUUUGUUUUUCAAAACCUACCAGGAGGAAGCAUGAACGCAGUUCCUCCCUACUACAAAUUAUGCAGCCGAGUUCCCCACGUUUGGGGAAAU 196 Query 112 GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUC 176 || | | |||| | ||||||||| | || ||| | | | |||||||| || Sbjct 197 GGCAGGGGUCAGCACACCUGGAGUGCAAUGGAUGAGCCUUGCCCUGGGAAAACCACCUUCAUGCUC 262 >> URS00028678AD_9913 Bos taurus (cattle) lncRNA (ENSBTAG00000061774.1) E-value: 6.7e-4 Identity: 61.15% Query coverage: 75.37% Gaps: 2.55% Alignment: Query 24 AUUUAAAUUUGAAGAAUUGGCAGG-GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU 111 ||| ||| || | | |||| || || |||||| || | |||| |||||||||| | | | | ||||| ||||||| || Sbjct 759 GUUUGUUUUUCAAAACCUACCAGGAGGAAGCAUGAACGCAGUUCCUCCCUACUACAAAUUAUGCAGCCGAGUUCCCCACGUUUGGGGAAAU 849 Query 112 GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUC 176 || | | |||| | ||||||||| | || ||| | | | |||||||| || Sbjct 850 GGCAGGGGUCAGCACACCUGGAGUGCAAUGGAUGAGCCUUGCCCUGGGAAAACCACCUUCAUGCUC 915 >> URS00028690F0_9913 Bos taurus (cattle) lncRNA (ENSBTAG00000061774.1) E-value: 7e-4 Identity: 61.15% Query coverage: 75.37% Gaps: 2.55% Alignment: Query 24 AUUUAAAUUUGAAGAAUUGGCAGG-GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU 111 ||| ||| || | | |||| || || |||||| || | |||| |||||||||| | | | | ||||| ||||||| || Sbjct 127 GUUUGUUUUUCAAAACCUACCAGGAGGAAGCAUGAACGCAGUUCCUCCCUACUACAAAUUAUGCAGCCGAGUUCCCCACGUUUGGGGAAAU 217 Query 112 GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUC 176 || | | |||| | ||||||||| | || ||| | | | |||||||| || Sbjct 218 GGCAGGGGUCAGCACACCUGGAGUGCAAUGGAUGAGCCUUGCCCUGGGAAAACCACCUUCAUGCUC 283 >> URS00022B1EE9_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000073652.1) E-value: 7.3e-4 Identity: 64.38% Query coverage: 65.02% Gaps: 10.27% Alignment: Query 43 GCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCC 128 |||||| || | ||| | ||||| |||||||||||| || ||||| | |||||| ||||||| || | | | |||| Sbjct 1853 UCAGGGGAAUGCACAAACACAGUCCCCCACUACCACAAAUUUUGCAGUCCAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAU 1941 Query 129 ACCAAGUGCAAUGUGG--GCCACUAGCCUAGGC------CAUGA---CCCUUCAUGA 174 | ||||||||| ||| | |||||| ||||| ||||||||| Sbjct 1942 CCGGAGUGCAAUGGAUAAGCCU-CACCCUAGGAAAACCACAUGAUAUACCUUCAUGA 1997 >> URS00009C5AED_9606 Homo sapiens long non-coding RNA NONHSAT214069.1 E-value: 7.8e-4 Identity: 60.12% Query coverage: 80.79% Gaps: 2.38% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 537 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 627 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | |||||||| || ||| | || | | ||||| ||||| ||| ||||||||||| Sbjct 628 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUAAGUA 704 >> URS00023481D9_9606 Homo sapiens (human) HSALNT0314336 E-value: 1.1e-3 Identity: 62.69% Query coverage: 64.53% Gaps: 2.24% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| | || || || |||| ||||||||||||||| ||| | | |||||| ||||||| || | | | |||| | || Sbjct 792 GGGAGAGUGCAAAUGCAGUUCCCCAUUACCACAAAUUAUGAAGUCGAGUUUCCCACCUUUGGGGAAAUUGCAGGGAUCAGCACAUCCAGAG 882 Query 135 UGCAAUGUGGGCCACUAGCCUAGGCCAU-GACCCUUCAUGAUC 176 | ||||| | ||| ||| || | |||| ||||| Sbjct 883 UACAAUGGAGAAGACUCGCCCUGGGAAAACCACCUUUGUGAUC 925 >> URS0001A1903D_74940 Oncorhynchus tshawytscha (Chinook salmon) lncRNA (ENSOTSG00005038996.1) E-value: 1.1e-3 Identity: 59.44% Query coverage: 87.19% Gaps: 3.33% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU 111 || || | |||| | ||| |||||||||| ||||| |||||| |||||||| || | | |||| ||| | | | Sbjct 1150 UUUAACAUCAAGAUCAG---GGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAAUCGAGAUUUCCACAUUUGAGAAAUU 1234 Query 112 GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUA 198 | | | |||| | ||||||||| | || ||| | || | ||||| ||||| ||| ||||||| Sbjct 1235 CGCAGGGGUCAGCACAGCCGGAGUGCAAUGGCUGAGCCUCGCCCUGGGUGAACCGCCUUCUUGAUCACGGUGUCUCCCUUGCCAGGUA 1322 Query 199 AGUA 202 |||| Sbjct 1323 AGUA 1326 >> URS0001A1CCBE_74940 Oncorhynchus tshawytscha (Chinook salmon) lncRNA (ENSOTSG00005038996.1) E-value: 1.1e-3 Identity: 59.44% Query coverage: 87.19% Gaps: 3.33% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU 111 || || | |||| | ||| |||||||||| ||||| |||||| |||||||| || | | |||| ||| | | | Sbjct 1098 UUUAACAUCAAGAUCAG---GGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAAUCGAGAUUUCCACAUUUGAGAAAUU 1182 Query 112 GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUA 198 | | | |||| | ||||||||| | || ||| | || | ||||| ||||| ||| ||||||| Sbjct 1183 CGCAGGGGUCAGCACAGCCGGAGUGCAAUGGCUGAGCCUCGCCCUGGGUGAACCGCCUUCUUGAUCACGGUGUCUCCCUUGCCAGGUA 1270 Query 199 AGUA 202 |||| Sbjct 1271 AGUA 1274 >> URS000233B76A_9606 Homo sapiens (human) HSALNT0314334 E-value: 1.3e-3 Identity: 62.41% Query coverage: 64.04% Gaps: 2.26% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 || | || || || |||| ||||||||||||||| ||| | | |||||| ||||||| || | | | |||| | ||| Sbjct 231 GGAGAGUGCAAAUGCAGUUCCCCAUUACCACAAAUUAUGAAGUCGAGUUUCCCACCUUUGGGGAAAUUGCAGGGAUCAGCACAUCCAGAGU 321 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAU-GACCCUUCAUGAUC 176 ||||| | ||| ||| || | |||| ||||| Sbjct 322 ACAAUGGAGAAGACUCGCCCUGGGAAAACCACCUUUGUGAUC 363 >> URS0000B2212D_9598 Pan troglodytes long non-coding RNA NONPTRT008781.1 E-value: 1.7e-3 Identity: 62.67% Query coverage: 71.92% Gaps: 3.33% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCA 138 ||||||||| ||||| ||||||||||||||| | | | |||||| ||||||| || | | | |||| || ||| | Sbjct 412 AAGCGCGAACGUAGUCCCCCACUACCACAAAUUAUGCAAUUGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUACAGAGUACU 502 Query 139 AUGUGGGCCACUAGCCUAGGCCAUGA-CCCUUCAUGAUCGGCCAUAG-ACCCCGUCCAG 195 ||| || ||| || | | ||||| |||||| ||| |||| |||| Sbjct 503 AUGGAUAAGCCUCGCCCUGGGAAAAACACCUUCGUGAUCGC-GAUAUCUCCCCUGCCAG 560 >> URS0000D4265F_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 1.8e-3 Identity: 61.11% Query coverage: 77.83% Gaps: 2.47% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | |||| | || Sbjct 35 GGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACAUCCGGAG 125 Query 135 UGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| || ||| | | | | ||||| ||||| ||| |||||||||||| Sbjct 126 UGCAAUCGAUGAGCCUCACACUGGGAAAAACCACCUUCGUGAUCAUGAUAUCUUCCCUGCCAGGUAAGUAU 196 >> URS000044F42B_9606 Homo sapiens (human) WEE2 antisense RNA 1 (ENSG00000261994.5) E-value: 1.9e-3 Identity: 60.74% Query coverage: 78.33% Gaps: 2.45% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 34 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACAUCCGGA 124 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| || ||| | || | | ||||| ||||| ||| |||||||||||| Sbjct 125 GUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUAAGUAU 196 >> URS0000D57143_9606 Homo sapiens (human) non-protein coding WEE2-AS1:14 E-value: 1.9e-3 Identity: 60.74% Query coverage: 78.33% Gaps: 2.45% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 33 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACAUCCGGA 123 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| || ||| | || | | ||||| ||||| ||| |||||||||||| Sbjct 124 GUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUAAGUAU 195 >> URS000196E5D3_7950 Clupea harengus (Atlantic herring) lncRNA (ENSCHAG00000004297.1) E-value: 2.1e-3 Identity: 59.79% Query coverage: 92.12% Gaps: 3.61% Alignment: Query 16 GGAGCAAAAUUUAAAUUUGAAGAAU-UGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC- 101 || ||| | | |||||| | | | |||||| |||||||||| |||| ||||||||||||||| ||| | | | || Sbjct 1154 GGCUCAAUUUCUUUCUUUGAACAUUAUAUCAGGGGAUAGCGCGAACGCAGUCCCCAACUACCACAAAUUAUGCAGUCGAGAUUUCUACA 1242 Query 102 -UUGGGGAGAUGGUAAGCCAGCGCACCCACC--AAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGAC 186 ||| | | | | | | ||| | || |||||||| | || ||| || | ||||| ||||| | Sbjct 1243 UUUGAGAAAUUCGCACGGGUCAGCAACGGCCGGUUGUGCAAUGGCCGAGCCUCGCCAUGGGUGAACCACCUUCUUGAUCAUGGUAUCUC 1331 Query 187 CCCGUCCAGGUAAGUA 202 ||| ||||||||||| Sbjct 1332 CCCUGCCAGGUAAGUA 1347 >> URS0000B23C9D_9598 Pan troglodytes long non-coding RNA NONPTRT016410.1 E-value: 2.2e-3 Identity: 59.52% Query coverage: 80.79% Gaps: 2.38% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 571 AUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACA 661 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | |||||||| || ||| | || | | ||||| ||||| ||| ||||||||||| Sbjct 662 UCCGGAGUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUAAGUA 738 >> URS00023BE70B_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC010805) E-value: 2.3e-3 Identity: 59.59% Query coverage: 71.43% Gaps: 1.37% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUAC-CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGC 124 | | | || || | ||||||| | | | | |||||||||||| | || |||||||| | || | | | Sbjct 13044 AAUAGUAGAGGUUGUGCGAACGUAUUAACGCUAUUGUAACAAAUUAUGACAUAAGUUCAAUCACUUGGGUAAAUCUCACGUGGUCAU 13130 Query 125 ACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 || ||| || ||| | | |||||||||||||||| ||| |||| | ||| Sbjct 13131 CCCAUAGAAGCGCGAUGAA-GUCGCUAGCCUAGGCCAUGAGUCUUAUUGAUAGCUCAUU 13188 >> URS0000052627_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.4e-3 Identity: 61.54% Query coverage: 74.88% Gaps: 2.56% Alignment: Query 51 CGCGCGAACGC-GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU--UGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGC 137 || | ||||| || ||||| ||||||||||||||| ||| | | |||| ||| || | || | | |||| ||||| Sbjct 9 AGCACAAACGCAGUCCCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCUUAAGUGGAGAAACGGCAGGGGUCAGCACAUCUGGAGUGC 98 Query 138 AAUGUGGGCCACUAGCCUAGGCCAUGAC-CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||| | |||||| || | | |||| ||||| | || ||||||||||| Sbjct 99 AAUGAAUGAGUCUAGCCCUGGAAACACCUCCUUAGUGAUCAUGGUAUCUCUCCUGCCAGGUAAGUA 164 >> URS0000EB2E67_9606 Homo sapiens (human) HSALNT0064079 E-value: 2.7e-3 Identity: 59.88% Query coverage: 82.76% Gaps: 2.91% Alignment: Query 34 GAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGC 122 | |||||||| ||| ||| |||| | | ||| |||| ||||| | || || | |||||| ||||||| |||| | | Sbjct 211 GCAGAAUUGGAGGGGAGCGCAUGAACACAGUCACCCACUACUACAAACUGUGCAGUUGGGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCA 301 Query 123 GCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCA-UGACCCUUCAUGAUCGGCCAUAGA-CCCCGUCCAGGUAAGU 201 |||| |||| |||| | | ||| || | |||| |||| | |||| || | |||||| ||| Sbjct 302 GCACAUCUGGAGUGUAAUGGAUGAGCCGUGCCCUGGAAAAACCACCUUUGUGAUUGU-GAUAGCUCCUCUGCCAGGUUAGU 381 >> URS00003326F3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.7e-3 Identity: 62.67% Query coverage: 72.91% Gaps: 2.67% Alignment: Query 55 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGU 142 ||| || || ||| ||||||||||||||| ||| | | |||||| ||||||| || | | | |||| | ||||||||| Sbjct 13 UGAAUGCAGAC-CCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGUUUAGCACAUCCAGAGUGCAAUGG 101 Query 143 GGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || |||| || | | | | ||||| | |||| |||| |||||| Sbjct 102 AUAAGCCUCGCCUGGGAAAAC-CACCUUGUGAUCAUGGAAUCUCCCCUGCCAGCUAAGUA 160 >> URS00023EA49C_3649 Carica papaya (papaya) long non-coding RNA (CPAP_LNC012237) E-value: 3e-3 Identity: 71.26% Query coverage: 42.36% Gaps: 1.15% Alignment: Query 69 CUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCA-GCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 |||||||||||||||| || ||||||||| |||||| |||| || | | ||| | || ||||||||| | | | || | Sbjct 68130 UACUACCACAAAUUAUGAUGUGCACUCUCCCUCUUGGGAAGAUCUUAGACUACACGCCCUUACUCAGUGCAAUGGAAGUCGCAAGUC 68216 >> URS00023A8153_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001221) E-value: 3.1e-3 Identity: 63.57% Query coverage: 68.47% Gaps: 1.43% Alignment: Query 63 UACCCCCUCUACCACAA-AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGC 146 ||||| | |||||| |||| || || || ||| ||||| | | | ||| |||||| |||||| || Sbjct 160986 AGCCCCCAUUGCCACAAAAUUAGGAAGUAAGCUAGACCAUUUGGGACCUUAGGUGGACAGU-CACCCAAAUUUUGCAAUAAAGGU 161069 Query 147 CACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || || ||||||||| |||| |||||| |||| | | || | | |||||| Sbjct 161070 AACAAGACUAGGCCAUAGGUCUUCUUGAUCGCCCAUUGGCUCCAUAGAAGUAAGU 161124 >> URS00027F4E28_9793 Equus asinus (ass) lncRNA (ENSEASG00005027562.1) E-value: 3.3e-3 Identity: 63.27% Query coverage: 70.94% Gaps: 2.04% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGU 142 |||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | | | |||| | |||||| || Sbjct 1 GCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGUGCAGUGG 91 Query 143 GGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGU 197 || ||| | || | ||||| ||||| |||| |||||| Sbjct 92 AUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGU 147 >> URS0002337578_9606 Homo sapiens (human) HSALNT0368721 E-value: 3.8e-3 Identity: 61.15% Query coverage: 74.88% Gaps: 4.46% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUAA--GCCAGCGCACCCACCA 132 ||| || ||| || ||||| ||||||||||| ||| ||| | | || ||||| ||||| || | | |||| ||||| Sbjct 278 GGGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGGAAAUCACAGGGGUCAGCACACCC--AG 366 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGU 197 ||||||||| || ||| || | ||||| ||||| |||| |||||| Sbjct 367 AGUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGUUAUCUCCCCUGCCAGGU 432 >> URS00019B0615_9995 Marmota monax (woodchuck) non-coding RNA E-value: 4.4e-3 Identity: 61.01% Query coverage: 76.85% Gaps: 2.52% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 ||| ||||||||||| | || |||||||||| ||| | | | |||||| | ||||| || | | | ||||| ||| Sbjct 952 GGGAGCGCGCGAACGCA-AUCCUUACUACCACAAACCAUGCAGCCUUGUUUCCCACAUUCGGGGAAAUCGCAGGGGUCAGCACCUCCCA 1039 Query 133 AGUGCAAUGUGGGCCACUAGC-CUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||||||||| | || || || | || | |||||| || | |||||||||| Sbjct 1040 AGUGCAAUGGAAAAGCCGUGCCCUGGGAAAACCAUCUACGUGAUCGUGGUGUUUCCGCUGCCAGGUAAGU 1109 >> URS0000CE483A_9598 Pan troglodytes (chimpanzee) retained intron E-value: 4.7e-3 Identity: 60.12% Query coverage: 78.33% Gaps: 2.45% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 34 GGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACAUCCGGA 124 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| || ||| | || | | ||||| ||||| ||| |||||||||||| Sbjct 125 GUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUAAGUAU 196 >> URS00004AF9B7_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5e-3 Identity: 64.15% Query coverage: 74.38% Gaps: 10.69% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUA-AGCCAGCGCACCCACCAAGUGCA 138 || | ||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | || |||| || | |||||| Sbjct 8 GCUCUAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCUCAUUUGGGGAAAUCGAAGAGGCAGCACAG---CACAGUGCA 94 Query 139 AUGUGGGCCA-----CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||| || | || ||| || | ||||| ||| | || | | ||||||||||| Sbjct 95 AUGAUGGAUAAGCCUCU-CCCUGGGAAAACCACCUUCGUGAAC----AUGG-UAUCUCCCAGGUAAGUA 157 >> URS0002335A7C_9606 Homo sapiens (human) HSALNT0368720 E-value: 5.4e-3 Identity: 60.13% Query coverage: 72.91% Gaps: 4.58% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUAA--GCCAGCGCACCCACCA 132 ||| || ||| || ||||| ||||||||||| ||| ||| | | || ||||| ||||| || | | |||| ||||| Sbjct 279 GGGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGGAAAUCACAGGGGUCAGCACACCC--AG 367 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 ||||||||| || ||| || | ||||| ||||| |||| || Sbjct 368 AGUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGUUAUCUCCCCUGCC 429 >> URS000233EA0F_9606 Homo sapiens (human) HSALNT0368723 E-value: 5.4e-3 Identity: 60.13% Query coverage: 72.91% Gaps: 4.58% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUAA--GCCAGCGCACCCACCA 132 ||| || ||| || ||||| ||||||||||| ||| ||| | | || ||||| ||||| || | | |||| ||||| Sbjct 260 GGGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGGAAAUCACAGGGGUCAGCACACCC--AG 348 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 ||||||||| || ||| || | ||||| ||||| |||| || Sbjct 349 AGUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGUUAUCUCCCCUGCC 410 >> URS000028A5AF_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.9e-3 Identity: 62.12% Query coverage: 63.05% Gaps: 3.03% Alignment: Query 49 GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG 136 | || ||||| ||||| |||||||||||||| || | | ||| || ||||||| || | ||| |||| | |||| Sbjct 7 AGAGUGCAAACGCAGUCCCCCAAUACCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUGGGGAAAUUGCAAGGGUCGGCACAUCCAGAGUG 96 Query 137 CAAUGUGGGCCACUAGCCUAGGCCAUGA--CCCUUCAUGAUC 176 ||||| || |||| | | | ||||| ||||| Sbjct 97 CAAUGGAUAAGCCUUGCCUUGAGAAAAAACACCUUCGUGAUC 138 >> URS00025E3C68_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000092425.1) E-value: 6.3e-3 Identity: 58.24% Query coverage: 82.27% Gaps: 4.12% Alignment: Query 10 AUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC-- 98 || | | || || | || | | | | ||| ||| | |||| ||||| |||||||||| |||| ||| | ||| Sbjct 540 AUACUUGCAGUAAUACCUAGAAAUACAAUCAU----GGGAGAGCGUGGACGCAGUCCCCCACUACCACAAACUAUGCAGUCGAGAUUCCCA 626 Query 99 CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUC 176 || ||||||| | | | | ||| | ||||| ||| | | ||| ||| |||| | ||||| || || Sbjct 627 CAUUUGGGGAAUUCGCAGGGGUCAGCAUGGCCGGAGUGCGAUGGGCGAGACUCGCCGUAGGUGAACCUCCUUCGUGGUC 705 >> URS00027F1611_10181 Heterocephalus glaber (naked mole-rat) lncRNA (ENSHGLG00000049152.1, ENSHGLG00100036277.1) E-value: 6.3e-3 Identity: 63.64% Query coverage: 63.05% Gaps: 4.55% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGU 135 | || || || ||||| |||||||||| |||| || | |||| | ||||||| || ||| | |||| || ||| ||| Sbjct 181 GCACGAAAAUGCAGUCCCCCACUACCACAAAGUAUGCAGUUGAGCUUCCCACAUUUGGGGAAAUCGUAGAGGUCAGCACAUCCA--GAGU 268 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCG 177 |||||| || || || || | ||||| ||||| Sbjct 269 GCAAUGGAGGAGCCUCACCCUGGAAAACCACCUUCGUGAUCA 310 >> URS0000386043_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.7e-3 Identity: 64.15% Query coverage: 51.23% Gaps: 6.60% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA--CUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAA 139 | ||||||| |||| |||| |||||||||| ||||| ||||||| ||||||| || | | | |||| ||||||| Sbjct 10 UCUCGAACGCAGUCCCCUACUACUACAAAUUAUGCAGUCCAGUUUCUCCCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCUGGAGUGCAA 99 Query 140 UGUGGGCCACUAGCCU 155 || ||||| Sbjct 100 UGAA-----UAAGCCU 110 >> URS0000D5D2EC_9606 Homo sapiens (human) non-protein coding WEE2-AS1:26 E-value: 7e-3 Identity: 59.15% Query coverage: 78.82% Gaps: 2.44% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 654 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 744 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUA 198 | |||||||| || ||| | || | | ||||| ||||| ||| ||||||| Sbjct 745 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUA 817 >> URS00023CBD10_3708 Brassica napus (rape) long non-coding RNA (BNAP_LNC006930) E-value: 7.2e-3 Identity: 68.00% Query coverage: 49.26% Gaps: 4.00% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 108 ||||| || | | ||| || || |||||||| || ||||| || |||||||| |||||| ||| ||||||||| | Sbjct 43458 AAAUUGAACUGUUGGGAAAAGGAAGAGGCCGCGCAAA----UACCCUUGCUGCCACAAAUAAUGACGCAGGAUCUUCCACUUGGGAA 43540 Query 109 GAUGGUAAGCCAG 121 || ||||| | Sbjct 43541 GACCUUAAGCUAA 43553 >> URS00027E6FA3_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015037676.1) E-value: 8e-3 Identity: 62.41% Query coverage: 64.04% Gaps: 2.26% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACC 131 ||| | ||| ||| || ||||| ||||| | ||||||| ||| | | ||| || ||||||| || | | | |||| | Sbjct 1017 GGGACAGCGAGAAUGCAGUCCCCCACUACCCCGAAUUAUGCAGUCUAGUUUCCUGCAGUUGGGGAAAUCGCAGGGGUCAGCACAUCCA 1104 Query 132 AAGUGCAAUGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAU 175 ||||||||| || ||| | | | ||||| |||| Sbjct 1105 GAGUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAU 1149 >> URS000236233B_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC008982) E-value: 1.4e-24 Identity: 76.92% Query coverage: 89.66% Gaps: 1.10% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 108 ||||| || ||| | | || ||||| ||||||||||| |||||||| ||||||| |||||||| |||| ||||||||| Sbjct 81462 AAAUUGAACAUUGU--AUUGGGUAGGGGACGCGCGAACGCAGGCCCCCUCUGCCACAAAAUAUGACGUAGACUCGGCCACUUGGGCC 81546 Query 109 GAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAG 195 || || || || || | |||||||||| || ||| |||||||| |||| ||||| ||||||||||| |||||||||||| Sbjct 81547 GACCUUAGGCAGGCAUCCCUCCAAAGUGCAAUGGAGGUCACCAGCCUAGGUCAUGGACCUUCUUGAUCGGCCAUUGACCCCGUCCAG 81633 Query 196 GUAAGUAU 203 |||||||| Sbjct 81634 GUAAGUAU 81641 >> URS00023DA4EF_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC020820) E-value: 8.8e-3 Identity: 69.41% Query coverage: 41.87% Gaps: 2.35% Alignment: Query 23 AAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 |||| | |||| | | || |||||| || ||||| | | ||| || ||||||||||||| || ||| |||||||| Sbjct 160 AAUUGGACUUUGC--AUUGGGUAGGGGCUGCACGAACACAGGCUCCCACUGCCACAAAUUAUGAUGUAGGCUCGGCCACUUGGAC 242 >> URS00023DAA4B_3847 Glycine max (soybean) long non-coding RNA (GMAX_LNC001854) E-value: 7.1e-23 Identity: 76.47% Query coverage: 91.63% Gaps: 2.14% Alignment: Query 18 AGCAAAAUUUAAAUUUGAAGAAUUGGCAGGG-GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU 103 | |||||||| || ||| |||| |||| ||||||||||||| | ||| ||||||||||||||||||| |||| |||||| Sbjct 81392 AACAAAAUUUUAAGUUG---CAUUGAUAGGGAGCCGCGCGAACGCAGGCUCCCACUACCACAAAUUAUGACGUAGGCUCUGCCACUU 81475 Query 104 GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 ||| ||| || | ||| | || | |||||||||| | |||| |||||||||| ||||| ||||| |||| ||||||| Sbjct 81476 GGGCAGACCUUAGGAAAGCACCCCUCCAAAGUGCAAUGGAAGUCACUUCCCUAGGCCAUAGACCUUCUUGAUCAUCCAUUGACCCCG 81562 Query 191 UCCAGGUAAGUAU 203 ||||||||||||| Sbjct 81563 UCCAGGUAAGUAU 81575 >> URS000010E80F_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.4e-3 Identity: 62.58% Query coverage: 73.89% Gaps: 3.87% Alignment: Query 53 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU---GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAA 139 || ||| ||||| ||||||||||||||| ||| | | |||||| | ||||| || | | | ||| | ||||||| Sbjct 11 AGCAAACAAAGUCCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCACAUUUGGGGGAAAUCGCAGGGGUCAACACAUCCGGAGUGCAA 100 Query 140 UG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || | ||| || ||| || | ||||| |||||| ||| ||||||||||| Sbjct 101 UGGAUAAGCCUCUC-CCUGGGAAAGCCACCUUCCUGAUCGUGGUAUCUCCCAUGCCAGGUAAGUA 164 >> URS0000EAC4C2_9606 Homo sapiens (human) HSALNT0190414 E-value: 1.2e-2 Identity: 61.59% Query coverage: 65.52% Gaps: 5.07% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUAA--GCCAGCGCACCCACCAA 133 || || ||| || ||||| ||||||||||| ||| ||| | | || ||||| ||||| || | | |||| ||||| | Sbjct 339 GGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGGAAAUCACAGGGGUCAGCACACCC--AGA 427 Query 134 GUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGC 179 |||||||| || ||| || | ||||| ||||| Sbjct 428 GUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUCAUG 474 >> URS0002338877_9606 Homo sapiens (human) HSALNT0368719 E-value: 1.2e-2 Identity: 61.59% Query coverage: 65.52% Gaps: 5.07% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUAA--GCCAGCGCACCCACCAA 133 || || ||| || ||||| ||||||||||| ||| ||| | | || ||||| ||||| || | | |||| ||||| | Sbjct 280 GGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGGAAAUCACAGGGGUCAGCACACCC--AGA 368 Query 134 GUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGC 179 |||||||| || ||| || | ||||| ||||| Sbjct 369 GUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUCAUG 415 >> URS00023435B9_9606 Homo sapiens (human) HSALNT0368722 E-value: 1.2e-2 Identity: 61.59% Query coverage: 65.52% Gaps: 5.07% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUAA--GCCAGCGCACCCACCAA 133 || || ||| || ||||| ||||||||||| ||| ||| | | || ||||| ||||| || | | |||| ||||| | Sbjct 261 GGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGGAAAUCACAGGGGUCAGCACACCC--AGA 349 Query 134 GUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGC 179 |||||||| || ||| || | ||||| ||||| Sbjct 350 GUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUCAUG 396 >> URS0002418F8F_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006389) E-value: 1.2e-2 Identity: 65.14% Query coverage: 53.69% Gaps: 0.92% Alignment: Query 55 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAU 140 |||| | | | |||| ||| |||| ||||| | | || || |||||| | ||| | || || | || ||||||||||| Sbjct 14122 CGAAUG-GAAACCCCGCUAUCACAGAUUAUUGCAUAGACCCUGCCACUUAGACAGACCUUGGGCAAGUACCCCUCCCAAGUGCAAU 14206 Query 141 GUGGGCCACUAGCCUAGGCCAUG 163 | || |||| || | | | | Sbjct 14207 GAAGGUGGCUAGGCUUGUCAACG 14229 >> URS00022B7946_10116 Rattus norvegicus (Norway rat) uncharacterized LOC103691943 (ENSRNOG00000065838.1) E-value: 1.3e-2 Identity: 61.74% Query coverage: 71.43% Gaps: 2.68% Alignment: Query 51 CGCGC-GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGC 137 |||| || ||| ||||| ||||||||||||||| ||| | ||| || ||||||| || | | | ||| | ||||| Sbjct 513 AGCGCGGAUCGCAGUCCCCCACUACCACAAAUUAUGCAGUCGCUUUUCCUGCAUUUGGGGAAAUCGCAGGGGUCAACACAUCCGGAGUGC 602 Query 138 AAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAG 195 |||| || ||| | || | ||||| ||||| | |||| ||||| Sbjct 603 AAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGCUACCUCCCCUUCCAG 661 >> URS00001CE4D3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.4e-2 Identity: 62.76% Query coverage: 69.46% Gaps: 3.45% Alignment: Query 61 CGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAU--GUGGGC 146 || ||||| ||||||||||||||| || | | ||| | ||||||| || ||| | | | | ||| ||||| |||||| Sbjct 20 AGUCCCCCCACUACCACAAAUUAUGCAGUUGAGUUUCCUGAAUUUGGGGAAAUCACAAGGAUAAGUAUACCCUAAGAGCAAUAUGUGGGC 109 Query 147 CACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | | |||||| | ||| | ||| | |||| |||||||||| Sbjct 110 C-UUGUCCUAGGAAAACUACCUACUUGAACAUGGUGUCCCCCCUGCCAGGUAAGU 163 >> URS000022CFA6_9606 Homo sapiens (human) WEE2 antisense RNA 1 (WEE2-AS1) E-value: 1.5e-2 Identity: 60.84% Query coverage: 68.47% Gaps: 2.80% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 212 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 302 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCG 177 | |||||||| || ||| | || | | ||||| ||||| Sbjct 303 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUCA 354 >> URS00025378FF_9606 Homo sapiens (human) ncRNA E-value: 1.5e-2 Identity: 60.84% Query coverage: 68.47% Gaps: 2.80% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 212 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 302 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCG 177 | |||||||| || ||| | || | | ||||| ||||| Sbjct 303 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUCA 354 >> URS00000F6DA3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.7e-2 Identity: 59.24% Query coverage: 74.38% Gaps: 3.82% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 || | || |||| || ||||| ||||||||||||||| ||| | | ||| | ||||||| | || | ||| |||| Sbjct 4 GGAGUAGCACGAAUGCAGCCCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCAGAAUUUGGGGAAACCAUAGGGAUCAACACAUACCAU 93 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAU----AGACCCCGUCCAGG 196 ||| ||| | || ||| || | | |||||||| | | | ||| ||||| Sbjct 94 GUGUAAUAAAAGAACCUCGCCCUGGGGAAACCACUUCAUGACCCUGGAAUGUCUGUCCCUUGCCAGG 160 >> URS0000CDD822_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 1.7e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | |||| Sbjct 212 AUUCAUGGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACA 302 Query 128 CACCAAGUGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | | | | ||||| ||||| Sbjct 303 UCCGGAGUGCAAUCGAUGAGCCUCACACUGGGAAAAACCACCUUCGUGAUC 353 >> URS00023B8020_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007720) E-value: 1.7e-2 Identity: 63.64% Query coverage: 54.19% Gaps: 0.91% Alignment: Query 67 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCU 155 || | ||||||||||||||| | ||||||| ||| ||||| | | | | ||||| |||| | || | ||| Sbjct 4077 CCUAUUGUCACAAAUUAUGACGUAAGUUUAAUGACUUGGGUCGAUCUUAAGCAAACCACACUCCAAAGUGAAAUGGAAGUCAUCAACCU 4165 Query 156 AGGCCAUGACCCUUCAUGAUC 176 |||||||| || | ||||| Sbjct 4166 AGGCCAUGGCCUU-ACUGAUC 4185 >> URS0000316A05_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.8e-2 Identity: 61.01% Query coverage: 75.86% Gaps: 4.40% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGU 135 || ||||| ||||| ||||||||||||||| || | | |||| | ||||||| || | | | ||| | | | ||| Sbjct 8 GAGCAUGAACGAAGUCCCCCACUACCACAAAUUAUGCAGUUGAGUUUCCCGAAUUUGGGGAAAUCGCAGAGGUCAGUAUAUC--CGGAGU 95 Query 136 GCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||| | || ||| | || | ||||| ||||| |||| |||||||||||| Sbjct 96 GCAAAGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUAGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS0000CEB978_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 2.1e-2 Identity: 62.50% Query coverage: 67.98% Gaps: 5.56% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | |||| Sbjct 239 AUUCAUGGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACA 329 Query 128 CACCAAGUGCAAUG--UGGGCCACUAGCCUAGGCCAUGAC--CCUUCAUGAUC 176 | |||||||| || ||| | | || | || ||||| ||||| Sbjct 330 UCCGGAGUGCAAUCGAUGAGCCUCACAC--UGGGAAAAACCACCUUCGUGAUC 380 >> URS0002802900_34620 Dermacentor andersoni (Rocky Mountain wood tick) uncharacterized LOC126529304 E-value: 2.1e-2 Identity: 60.96% Query coverage: 88.18% Gaps: 8.02% Alignment: Query 24 AUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU--CCCA-CUUGGGGAGA 110 ||| |||| ||| | || ||| |||||||||| ||||| |||||| ||||| | | || ||| |||| |||||| Sbjct 8 UUUUUAAUUGAUAGAGUAGG--GGGAUAGCGCGAACGCAGUCCCCCACUACCAAAAAUUGC-AUGCCCCAUCUGCCCCAGUUUGGGGUAG 94 Query 111 UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCC-UUCAUGAUCGGCCAUAG--ACCCCG--UCCAG 195 ||| | | |||| | ||||||||| || || || || | | | | | ||||| || | | | || |||| Sbjct 95 UGGCAGGGGUCAGCACGAGCGCAGUGCAAUGCUCGCGCCUCUCCCUGGAGAGGCCACCUGGCUGAUC----AUGGUAAUCUCGGCACCAG 180 Query 196 GUAAGUA 202 ||||||| Sbjct 181 GUAAGUA 187 >> URS00009B291E_10090 Mus musculus long non-coding RNA NONMMUT062701.2 E-value: 2.2e-2 Identity: 68.27% Query coverage: 49.26% Gaps: 5.77% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAG--CCAGCGCACCCAC 130 |||| |+|||||| | |||| ||||||||||||||| ||||| |+||| ||+||||| | || | | | +|||| +|+|||| Sbjct 192 AGGGAAAGUGCGAACACAGUACCCCACUACCACAAAUUAUGCAGUCCAGUUUCCUGCAUUUGGGAAAAUCGCAGGGGUCAGCAUAUCCAC 281 Query 131 CAAGUGCAAUGUGG 144 ||||||||| Sbjct 282 --AGUGCAAUGGAU 293 >> URS0000CD4AA9_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 2.2e-2 Identity: 62.50% Query coverage: 67.98% Gaps: 5.56% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | |||| Sbjct 234 AUUCAUGGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACA 324 Query 128 CACCAAGUGCAAUG--UGGGCCACUAGCCUAGGCCAUGAC--CCUUCAUGAUC 176 | |||||||| || ||| | | || | || ||||| ||||| Sbjct 325 UCCGGAGUGCAAUCGAUGAGCCUCACAC--UGGGAAAAACCACCUUCGUGAUC 375 >> URS0000D03FBA_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 2.2e-2 Identity: 62.50% Query coverage: 67.98% Gaps: 5.56% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | |||| Sbjct 153 AUUCAUGGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACA 243 Query 128 CACCAAGUGCAAUG--UGGGCCACUAGCCUAGGCCAUGAC--CCUUCAUGAUC 176 | |||||||| || ||| | | || | || ||||| ||||| Sbjct 244 UCCGGAGUGCAAUCGAUGAGCCUCACAC--UGGGAAAAACCACCUUCGUGAUC 294 >> URS0000D18CFD_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 2.2e-2 Identity: 62.50% Query coverage: 67.98% Gaps: 5.56% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | |||| Sbjct 403 AUUCAUGGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACA 493 Query 128 CACCAAGUGCAAUG--UGGGCCACUAGCCUAGGCCAUGAC--CCUUCAUGAUC 176 | |||||||| || ||| | | || | || ||||| ||||| Sbjct 494 UCCGGAGUGCAAUCGAUGAGCCUCACAC--UGGGAAAAACCACCUUCGUGAUC 544 >> URS00001E3B9F_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 239 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 329 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 330 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 380 >> URS000038C235_9606 Homo sapiens (human) WEE2 antisense RNA 1 (ENSG00000261994.5) E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 387 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 477 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 478 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 528 >> URS00003A8D2C_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 234 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 324 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 325 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 375 >> URS00004D2697_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 153 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 243 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 244 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 294 >> URS0000D56D8C_9606 Homo sapiens (human) non-protein coding WEE2-AS1:16 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 212 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 302 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 303 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 353 >> URS0000D5770B_9606 Homo sapiens (human) non-protein coding WEE2-AS1:20 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 212 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 302 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 303 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 353 >> URS0000D581D3_9606 Homo sapiens (human) non-protein coding WEE2-AS1:24 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 654 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 744 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 745 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 795 >> URS0000D58F71_9606 Homo sapiens (human) non-protein coding WEE2-AS1:13 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 212 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 302 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 303 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 353 >> URS0000D593B1_9606 Homo sapiens (human) non-protein coding WEE2-AS1:23 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 463 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 553 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 554 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 604 >> URS0000D5C6DE_9606 Homo sapiens (human) non-protein coding WEE2-AS1:25 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 654 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 744 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 745 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 795 >> URS0000D5D0AC_9606 Homo sapiens (human) non-protein coding WEE2-AS1:15 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 842 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 932 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 933 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 983 >> URS0000EB071B_9606 Homo sapiens (human) HSALNT0129943 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCA 125 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | ||| Sbjct 910 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCA 998 Query 126 CCCACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | | |||||||| || ||| | || | | ||||| ||||| Sbjct 999 CAUCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 1051 >> URS0000EC20E1_9606 Homo sapiens (human) HSALNT0129942 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 736 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 826 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 827 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 877 >> URS0000EEB819_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 167 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 257 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 258 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 308 >> URS0000EF3174_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 71 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 161 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 162 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 212 >> URS0000EF52DF_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 387 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 477 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 478 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 528 >> URS0002268910_9606 Homo sapiens (human) PREDICTED lncRNA (TCONS_00247420) E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 387 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 477 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 478 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 528 >> URS0002346E22_9606 Homo sapiens (human) HSALNT0343809 E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 219 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 309 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 310 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 360 >> URS00025104C7_9606 Homo sapiens (human) ncRNA E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 167 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 257 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 258 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 308 >> URS0002511ED8_9606 Homo sapiens (human) ncRNA E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 387 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 477 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 478 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 528 >> URS0002520495_9606 Homo sapiens (human) non-coding RNA E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 153 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 243 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 244 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 294 >> URS00025468C4_9606 Homo sapiens (human) ncRNA E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 219 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 309 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 310 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 360 >> URS0002563078_9606 Homo sapiens (human) ncRNA E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 239 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 329 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 330 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 380 >> URS0002587614_9606 Homo sapiens (human) ncRNA E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 153 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 243 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 244 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 294 >> URS00025B9314_9606 Homo sapiens (human) non-coding RNA E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 167 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 257 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 258 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 308 >> URS00025DEF48_9606 Homo sapiens (human) ncRNA E-value: 2.3e-2 Identity: 61.27% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 234 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 324 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 325 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 375 >> URS000198F701_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00030007386.1) E-value: 2.4e-2 Identity: 76.54% Query coverage: 38.42% Gaps: 3.70% Alignment: Query 36 AGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGG 113 ||||| |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | Sbjct 3235 AGAAUCACCAGGGGAAAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCG 3315 >> URS000199726B_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00030007234.1) E-value: 2.4e-2 Identity: 76.54% Query coverage: 38.42% Gaps: 3.70% Alignment: Query 36 AGAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGG 113 ||||| |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | Sbjct 2883 AGAAUCACCAGGGGAAAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCG 2963 >> URS00004637B1_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.8e-2 Identity: 61.15% Query coverage: 74.38% Gaps: 5.73% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGG-GGAGAUGGUAA-GCCAGCGCACCCACCAAGUGC 137 || ||| | ||||| |||||||||||||| ||| || ||||| |||| ||| || | | ||| || | ||||| Sbjct 10 GCAUGAAUGUAGGCCCCCAUUACCACAAAUUAUGCAGUCAGCUUUCCCAUAUUUGGGGGAAAUCCCAGGGUCAG--CAUGUCCAGAGUGC 97 Query 138 AAUGUGG--GCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||| ||| | ||| || | ||||||||||| |||| |||||||| || Sbjct 98 AAUGGAUAAGCC-UCACCCUGGGAAAACCACCUUCAUGAUCAUGGUAUCUCCCCUGCCAGGUAAAUA 163 >> URS00022B48B7_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000084783.1) E-value: 2.8e-2 Identity: 59.24% Query coverage: 74.88% Gaps: 3.18% Alignment: Query 40 UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUA--AGCCAGCGCAC 126 ||| |||| | ||| | || | |||||| |||||||| ||| | | ||| ||| |||| || | | || ||| || Sbjct 421 UUGCAAGGGAUAACAUGAAUGUAGUUCCUCACUACCAUAAAUUAUGCAGUCGAGUUUCCUGCACCUGGGAGAAUCGCAGGAGUAAGCACAG 511 Query 127 CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCG-GCCAUAGACCCCGU 191 | | |||||||| | | || || || | ||||||||||| | ||| ||| | Sbjct 512 CUAUGGGGUGCAAUGAGUGAGCCUCACCCUGGGAAACCACCUUCAUGAUCAUGGCAUCUCCCCUGC 577 >> URS0000D5B83B_9606 Homo sapiens (human) non-protein coding WEE2-AS1:9 E-value: 3.1e-2 Identity: 60.99% Query coverage: 67.49% Gaps: 2.84% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 616 AUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACA 706 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAU 175 | |||||||| || ||| | || | | ||||| |||| Sbjct 707 UCCGGAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAU 756 >> URS00001D2EBE_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.4e-2 Identity: 59.85% Query coverage: 67.00% Gaps: 0.73% Alignment: Query 67 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU-AGCCU 155 | ||||||||||||||| | | ||| ||| | | ||||| | | ||| || ||||||||| | || | | | Sbjct 17 UCUACUACCACAAAUUAUGCAGCCGACUUUCCUGCAUUUGGAGAAAUCAUGGGUUAGCAUCCCUGGAGUGCAAUGGAUGAGCCUCACCUU 106 Query 156 AGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||| | || |||||||| |||| ||||||||||| Sbjct 107 AGGAAAAUCACCCUCAUGAUCAUGAGAUCUCCCCUGCCAGGUAAGUA 153 >> URS0000D3ED24_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 3.8e-2 Identity: 60.14% Query coverage: 68.47% Gaps: 2.80% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 212 AUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACA 302 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCG 177 | |||||||| || ||| | || | | ||||| ||||| Sbjct 303 UCCGGAGUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUCA 354 >> URS000283FBCE_543639 Dermacentor silvarum (Tick) uncharacterized LOC125945587 E-value: 4e-2 Identity: 59.60% Query coverage: 95.07% Gaps: 4.04% Alignment: Query 10 AUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU-- 96 || ||| || | ||| ||| | ||| | ||| |||||||||| ||||| |||||| ||||| | | || ||| Sbjct 327 AUACAACGAUCUUUCUUUGGAUUC-AGUAAUGGAGGGGGAUAGCGCGAACGCAGUCCCCCACUACCAAAAAUUGC-AUGCCCCAUCUGC 413 Query 97 CCC-ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGAC-CCUUCAUGAUCGGCCAUA 183 ||| |||||| ||| | | |||| | ||||||||| || || || || | | ||| ||||| || Sbjct 414 CCCAGUUUGGGGUAGUGGCAGGGGUCAGCACGAGCGCAGUGCAAUGCCCGCGCCUCUCCCUGGGGACACCGCCUAGCUGAUCACG-GUA 501 Query 184 GACCCCG-UCCAGGUAAGUA 202 ||| | ||||||||||| Sbjct 502 AUCCCGGCACCAGGUAAGUA 521 >> URS0002604F65_400727 Pomacea canaliculata (Apple snail) uncharacterized LOC112556437 E-value: 4.4e-2 Identity: 62.18% Query coverage: 57.64% Gaps: 1.68% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGA 110 | | |||| || ||| ||| |||||||||| |||||| || |||||| | || | || ||||| |||||| || Sbjct 992 UGACAUUUUAAAUUUUGCAGGGGAUAGCGCGAACGCAGUCCCCCUUACGCAUAAAUUACGCACUCGAGUCACCCACAUUUGGGGUGA 1078 Query 111 UGGUAAGCCAGCGCACCCACCAAGUGCAAUGU 142 | | | | | | | | | |||||||| Sbjct 1079 UCGCAGGGGUCAACCCGCCCGAGGUGCAAUGG 1110 >> URS000010D92E_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.5e-2 Identity: 58.71% Query coverage: 74.88% Gaps: 1.94% Alignment: Query 51 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCA 138 | | |||| | ||| |||| |||||||||| || | | |||| | ||||||| || | | |||| | |||||| || Sbjct 7 AGUGUGAACAAAGUCUCCCACUACUACAAAUUAUGCACUCAAGUUUCCCGAAUUUGGGGAAAUCUCAGGGGUCAGCACACCCCAAGUACA 96 Query 139 AUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||| | || ||| || | ||| | ||||| || | ||||||||| | Sbjct 97 AUGGAUGGGCCUCGCCCUGGGAAAACCACCUCCUUGAUCAUGGUAUCUCCGCUGCCAGGUAAGCA 161 >> URS00023A9556_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC007477) E-value: 2.7e-15 Identity: 81.97% Query coverage: 60.10% Gaps: 0.00% Alignment: Query 74 CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCC 160 |||||||||| || ||||||||||| ||||| | ||||| || ||| | |||||||||| |||||||| ||||||| ||||||| Sbjct 51471 CCACAAAUUACGAGGUCCACUCUCCUACUUGUGAAGAUGAUAGACCAACACACCCACCAAAUGCAAUGUAGGCCACUCAUCUAGGCC 51557 Query 161 AUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAG 195 ||| |||||||||||| |||| ||| ||||| | Sbjct 51558 AUGGGCCUUCAUGAUCGCCCAUCAACCUCGUCCGG 51592 >> URS0000EC068C_9606 Homo sapiens (human) HSALNT0207380 E-value: 4.7e-2 Identity: 61.07% Query coverage: 71.92% Gaps: 3.36% Alignment: Query 30 AUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAA 116 |||| || | | || | | ||||| ||||| ||||||||||||||| ||||| | |||||| ||||| | | | Sbjct 4000 AUUUUAAACACCAGGAGAGA--ACACGAACAUAGUCCCCCACUACCACAAAUUAUGCAGUCCAGUUUCCCACAUUUGGGAAAACCACAG 4086 Query 117 GCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC-CUAGGCCAUGACCCUUCAUGAU 175 || |||| | | ||||||| | ||| || || | |||||||||| Sbjct 4087 GCGUCAGCACAUCCAGAAUGCAAUGGAUAAGCCCAGCUCUGGGAAAAUCACCUUCAUGAU 4146 >> URS00005FFA28_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.7e-2 Identity: 60.53% Query coverage: 72.41% Gaps: 4.61% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUGCAA 139 ||| || ||||| ||||||||||||||| || | | ||| || |||| || || | || ||||| | ||| |||||| Sbjct 12 AUGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUGGAGAAAUCUCAGGAGUCAGCGUAUCCA--GAGUGCAG 99 Query 140 UGUGGGCCACUAGCCUAGGCCA-UGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 || | |||||| || | |||| ||||| | || | ||||||| Sbjct 100 UGGCUGAGUCUAGCCCUGGGAAAACCACCUUUGUGAUCACGGUACCUCUCCUGCAAGGUAAG 161 >> URS000009B22F_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.8e-2 Identity: 58.13% Query coverage: 75.37% Gaps: 8.13% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU---GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG 136 | ||| | || ||||| ||||||||||||||| | | | |||||| | ||||| || ||| | || | | |||| Sbjct 8 C--CGCCAUUGCAGUCCCCCACUACCACAAAUUAUGCAAUUGAGUUUCCCACAUUUGGGGGAAAUCGUAGGGGUCUGCUCAUCCAGAGUG 95 Query 137 CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCC----CGUCCAGGUAAGUA 202 ||| | | ||| || | |||||||| | ||| | || | ||| ||||||| Sbjct 96 CAACGGAUAGCCUCGCCCUGGGAAAACCACCUUCAUGGU----CAUGGUACCUCUCCUGCCAAGUAAGUA 161 >> URS0000CD1F00_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 5.3e-2 Identity: 63.04% Query coverage: 65.02% Gaps: 5.80% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | |||| | | Sbjct 33 GGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACAUCCGGA 123 Query 134 GUGCAAUG--UGGGCCACUAGCCUAGGCCAUGAC--CCUUCAUGAUC 176 ||||||| || ||| | | || | || ||||| ||||| Sbjct 124 GUGCAAUCGAUGAGCCUCACAC--UGGGAAAAACCACCUUCGUGAUC 168 >> URS0000CE052B_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 5.4e-2 Identity: 62.22% Query coverage: 64.53% Gaps: 2.96% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | |||| | || Sbjct 150 GGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACAUCCGGAG 240 Query 135 UGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 |||||| || ||| | | | | ||||| ||||| Sbjct 241 UGCAAUCGAUGAGCCUCACACUGGGAAAAACCACCUUCGUGAUC 284 >> URS0000D4BC95_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 5.4e-2 Identity: 63.50% Query coverage: 64.53% Gaps: 5.84% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | |||| | || Sbjct 24 GGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACAUCCGGAG 114 Query 135 UGCAAUG--UGGGCCACUAGCCUAGGCCAUGAC--CCUUCAUGAUC 176 |||||| || ||| | | || | || ||||| ||||| Sbjct 115 UGCAAUCGAUGAGCCUCACAC--UGGGAAAAACCACCUUCGUGAUC 158 >> URS0000D495C1_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 5.7e-2 Identity: 60.56% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 239 AUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACA 329 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 330 UCCGGAGUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUC 380 >> URS0000EEFC60_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 5.8e-2 Identity: 61.76% Query coverage: 65.02% Gaps: 2.94% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 33 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACAUCCGGA 123 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||||||| || ||| | || | | ||||| ||||| Sbjct 124 GUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 168 >> URS00001059DE_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.9e-2 Identity: 60.26% Query coverage: 72.91% Gaps: 7.28% Alignment: Query 55 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGU 142 | ||||| ||||| ||||||||| ||||| ||||| | ||| || ||||||| || | | | | ||||||||| Sbjct 13 CAAACGCAGUCCCCCACUACCACAAUUUAUGCAGUCCAGUUUCCUGCAUUUGGGGAAAUCACA-----GGGAUC---UUGAGUGCAAUGG 94 Query 143 GGGCCACUAGCCUAGGCCA-UGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || ||| || || |||| ||||| |||| ||||||||||| Sbjct 95 AUAAGUCUCGCCGUGGGCAAACCACCUUUGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUA 155 >> URS0000B2628A_9598 Pan troglodytes long non-coding RNA NONPTRT016409.1 E-value: 5.9e-2 Identity: 60.56% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 764 AUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACA 854 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 855 UCCGGAGUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUC 905 >> URS0000CD35B6_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 5.9e-2 Identity: 60.56% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 389 AUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACA 479 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 480 UCCGGAGUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUC 530 >> URS0000CE8733_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 5.9e-2 Identity: 60.56% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 234 AUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACA 324 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 325 UCCGGAGUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUC 375 >> URS0000D07B05_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 5.9e-2 Identity: 60.56% Query coverage: 67.98% Gaps: 2.82% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| Sbjct 153 AUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACA 243 Query 128 CACCAAGUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | |||||||| || ||| | || | | ||||| ||||| Sbjct 244 UCCGGAGUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUC 294 >> URS00000AA521_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 6e-2 Identity: 61.76% Query coverage: 65.02% Gaps: 2.94% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 33 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACAUCCGGA 123 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||||||| || ||| | || | | ||||| ||||| Sbjct 124 GUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 168 >> URS0000D5BEBB_9606 Homo sapiens (human) non-protein coding WEE2-AS1:17 E-value: 6e-2 Identity: 61.76% Query coverage: 65.02% Gaps: 2.94% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 33 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACAUCCGGA 123 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||||||| || ||| | || | | ||||| ||||| Sbjct 124 GUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 168 >> URS0000D5CDF1_9606 Homo sapiens (human) non-protein coding WEE2-AS1:19 E-value: 6e-2 Identity: 61.76% Query coverage: 65.02% Gaps: 2.94% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 33 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACAUCCGGA 123 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||||||| || ||| | || | | ||||| ||||| Sbjct 124 GUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 168 >> URS000049A716_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 6.1e-2 Identity: 61.76% Query coverage: 65.02% Gaps: 2.94% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 23 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACAUCCGGA 113 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||||||| || ||| | || | | ||||| ||||| Sbjct 114 GUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 158 >> URS00003223E6_9606 Homo sapiens (human) WEE2 antisense RNA 1 (ENSG00000261994.5) E-value: 6.6e-2 Identity: 62.22% Query coverage: 64.53% Gaps: 2.96% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| | || Sbjct 150 GGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACAUCCGGAG 240 Query 135 UGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 |||||| || ||| | || | | ||||| ||||| Sbjct 241 UGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 284 >> URS0000EED751_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 6.6e-2 Identity: 62.22% Query coverage: 64.53% Gaps: 2.96% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| ||||| | || | | |||| | || Sbjct 150 GGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCACAGGGGUCAGCACAUCCGGAG 240 Query 135 UGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 |||||| || ||| | || | | ||||| ||||| Sbjct 241 UGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUC 284 >> URS000051B26D_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.3e-2 Identity: 62.41% Query coverage: 65.02% Gaps: 8.51% Alignment: Query 54 GCGAACGC-GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGA----UGGUAAGCCAGCGCACCCACCAAGUG 136 | |||| | || ||||| ||||||||||||||| ||| | | |||| | ||||||| | | | | |||| || | ||| || Sbjct 12 GAGAACACAGUCCCCCCACUACCACAAAUUAUGCUGUCAAAUUUCCCGCAUUUGGGGAAAAAUCUCAGAGGUCAGCACAUC---CAAAUG 98 Query 137 CAAUGUGGGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCG-GCCAUAGA 185 ||||| || ||| || | ||||| ||||| | || | Sbjct 99 CAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCGC 149 >> URS0002610446_6850 Limulus polyphemus (Atlantic horseshoe crab) leukocyte elastase inhibitor A-like, transcript variant X3 E-value: 8.3e-2 Identity: 61.59% Query coverage: 65.02% Gaps: 6.52% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU--CCC-ACUUGGGGAGAUGGUAAG--CCAGCGCACCCAC 130 ||| |||||||||| ||||| |||||| |||||| ||| | ||| ||| |||||| ||| | | || | || | Sbjct 30 GGGGAUAGCGCGAACGCAGUCCCCCACUACCAAAAAUUACA-CGUUCCAUCUGCCCCAGUUUGGGGUAGUGGCAGGGGUCAACUCA--AUC 117 Query 131 CAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUC 176 ||||||||| | || || | || | ||||| ||||| Sbjct 118 AGAGUGCAAUGAAUGAGCCUUUCCCUGGGGAAGCCACCUUCUUGAUC 164 >> URS0000EBB5F8_9606 Homo sapiens (human) HSALNT0122898 E-value: 1.1e-1 Identity: 61.86% Query coverage: 56.65% Gaps: 2.54% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || ||| Sbjct 465 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCUUGCC 555 Query 155 -UAGGCCAUGACCCUUCAUGAUCGGCC 180 | || | ||||| ||||| Sbjct 556 CUGGGAAAACCACCUUCGUGAUCAUGG 582 >> URS00023D9766_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008447) E-value: 1.6e-35 Identity: 85.87% Query coverage: 90.64% Gaps: 1.09% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 |||| |||| | | | || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 46467 CAAACUUUAUACAUUA--GUUUAGUAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCUGCUUGAG 46551 Query 107 GAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 ||||||||||||| | || || |||||||||||| ||||||| | |||||||| ||||||| |||||||||||||||||||||| Sbjct 46552 GAGAUGGUAAGCCCGUGCUCCUCCCAAGUGCAAUGGAGGCCACUGACUUAGGCCAUAACCCUUCUUGAUCGGCCAUAGACCCCGUCC 46638 Query 194 AGGUAAGUAU 203 |||||||||| Sbjct 46639 AGGUAAGUAU 46648 >> URS0000E984F0_9606 Homo sapiens (human) HSALNT0122897 E-value: 1.3e-1 Identity: 61.98% Query coverage: 58.13% Gaps: 2.48% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || ||| Sbjct 465 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCUUGCC 555 Query 155 -UAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 | || | ||||| ||||| || Sbjct 556 CUGGGAAAACCACCUUCGUGAUCAUGGUUA 585 >> URS0000E9A837_9606 Homo sapiens (human) HSALNT0122901 E-value: 1.3e-1 Identity: 63.48% Query coverage: 55.17% Gaps: 2.61% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || ||| Sbjct 345 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCUUGCC 435 Query 155 -UAGGCCAUGACCCUUCAUGAUCG 177 | || | ||||| ||||| Sbjct 436 CUGGGAAAACCACCUUCGUGAUCA 459 >> URS000233F523_9606 Homo sapiens (human) HSALNT0340793 E-value: 1.3e-1 Identity: 61.98% Query coverage: 58.13% Gaps: 2.48% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || ||| Sbjct 680 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCUUGCC 770 Query 155 -UAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 | || | ||||| ||||| || Sbjct 771 CUGGGAAAACCACCUUCGUGAUCAUGGUUA 800 >> URS000234161F_9606 Homo sapiens (human) HSALNT0340790 E-value: 1.3e-1 Identity: 61.98% Query coverage: 58.13% Gaps: 2.48% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || ||| Sbjct 466 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCUUGCC 556 Query 155 -UAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 | || | ||||| ||||| || Sbjct 557 CUGGGAAAACCACCUUCGUGAUCAUGGUUA 586 >> URS000234209F_9606 Homo sapiens (human) HSALNT0340794 E-value: 1.3e-1 Identity: 61.98% Query coverage: 58.13% Gaps: 2.48% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || ||| Sbjct 401 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCUUGCC 491 Query 155 -UAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 | || | ||||| ||||| || Sbjct 492 CUGGGAAAACCACCUUCGUGAUCAUGGUUA 521 >> URS0002344F25_9606 Homo sapiens (human) HSALNT0340797 E-value: 1.3e-1 Identity: 61.98% Query coverage: 58.13% Gaps: 2.48% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || ||| Sbjct 442 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCUUGCC 532 Query 155 -UAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 | || | ||||| ||||| || Sbjct 533 CUGGGAAAACCACCUUCGUGAUCAUGGUUA 562 >> URS0000CD96D0_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 1.3e-1 Identity: 61.03% Query coverage: 65.02% Gaps: 2.94% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 33 GGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACAUCCGGA 123 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||||||| || ||| | || | | ||||| ||||| Sbjct 124 GUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUC 168 >> URS0000D148C5_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 1.3e-1 Identity: 61.03% Query coverage: 65.02% Gaps: 2.94% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 149 GGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACAUCCGGA 239 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||||||| || ||| | || | | ||||| ||||| Sbjct 240 GUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUC 284 >> URS0000D107C4_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 1.3e-1 Identity: 61.03% Query coverage: 65.02% Gaps: 2.94% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | |||| | | Sbjct 23 GGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACAUCCGGA 113 Query 134 GUGCAAU--GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||||||| || ||| | || | | ||||| ||||| Sbjct 114 GUGCAAUCGAUGAGCCUCACGCUGGGAAAAACCACCUUCGUGAUC 158 >> URS0000E9F8AE_9606 Homo sapiens (human) HSALNT0122904 E-value: 1.4e-1 Identity: 61.34% Query coverage: 57.14% Gaps: 2.52% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || Sbjct 12869 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCU 12955 Query 151 AGCC-UAGGCCAUGACCCUUCAUGAUCGGCCA 181 ||| | || | ||||| ||||| Sbjct 12956 UGCCCUGGGAAAACCACCUUCGUGAUCAUGGU 12987 >> URS000233AE5D_9606 Homo sapiens (human) HSALNT0340800 E-value: 1.4e-1 Identity: 62.39% Query coverage: 56.16% Gaps: 2.56% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || ||| Sbjct 318 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCUUGCC 408 Query 155 -UAGGCCAUGACCCUUCAUGAUCGGC 179 | || | ||||| ||||| Sbjct 409 CUGGGAAAACCACCUUCGUGAUCAUG 434 >> URS0000EA20A4_9606 Homo sapiens (human) HSALNT0122899 E-value: 1.5e-1 Identity: 61.98% Query coverage: 58.13% Gaps: 2.48% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || Sbjct 10442 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCU 10528 Query 151 AGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 ||| | || | ||||| ||||| || Sbjct 10529 UGCCCUGGGAAAACCACCUUCGUGAUCAUGGUUA 10562 >> URS0002342DDC_9606 Homo sapiens (human) HSALNT0340791 E-value: 1.5e-1 Identity: 61.98% Query coverage: 58.13% Gaps: 2.48% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || Sbjct 10428 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCU 10514 Query 151 AGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 ||| | || | ||||| ||||| || Sbjct 10515 UGCCCUGGGAAAACCACCUUCGUGAUCAUGGUUA 10548 >> URS0002203C59_9606 Homo sapiens (human) PREDICTED lncRNA (TCONS_00243965) E-value: 1.6e-1 Identity: 61.98% Query coverage: 58.13% Gaps: 2.48% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || ||| Sbjct 242 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCUUGCC 332 Query 155 -UAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 | || | ||||| ||||| || Sbjct 333 CUGGGAAAACCACCUUCGUGAUCAUGGUUA 362 >> URS00005DA835_28829 Solea senegalensis (Senegalese sole) U1 snRNA E-value: 1.6e-1 Identity: 59.74% Query coverage: 74.88% Gaps: 1.95% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | |||||| ||| |||| ||| || |||||||| ||| | |||||| ||||||| | | | | ||| | ||| Sbjct 6 GAAAGCGCGACCGCAGCACCCCACUAGCAAAAAUUAUGCAGUCAAGAUUCCCACGUUUGGGGAAUUUGCAGGGGUCAACACAGCCGGAGU 95 Query 136 GCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 |||||| | | || ||| || | |||| ||||| |||| |||||||| Sbjct 96 GCAAUGGUGAGC-CUCGCCCUGGGUGAACCGCUUCUUGAUCAUGGUAUCUCCCCUGCCAGGUAA 158 >> URS0000EB43BF_9606 Homo sapiens (human) HSALNT0122902 E-value: 1.8e-1 Identity: 63.48% Query coverage: 55.17% Gaps: 2.61% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || Sbjct 12749 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCU 12835 Query 151 AGCC-UAGGCCAUGACCCUUCAUGAUCG 177 ||| | || | ||||| ||||| Sbjct 12836 UGCCCUGGGAAAACCACCUUCGUGAUCA 12863 >> URS0000EB55EB_9606 Homo sapiens (human) HSALNT0122900 E-value: 1.8e-1 Identity: 63.48% Query coverage: 55.17% Gaps: 2.61% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || Sbjct 12840 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCU 12926 Query 151 AGCC-UAGGCCAUGACCCUUCAUGAUCG 177 ||| | || | ||||| ||||| Sbjct 12927 UGCCCUGGGAAAACCACCUUCGUGAUCA 12954 >> URS0000EBF3E5_9606 Homo sapiens (human) HSALNT0122903 E-value: 1.8e-1 Identity: 63.48% Query coverage: 55.17% Gaps: 2.61% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || Sbjct 10327 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCU 10413 Query 151 AGCC-UAGGCCAUGACCCUUCAUGAUCG 177 ||| | || | ||||| ||||| Sbjct 10414 UGCCCUGGGAAAACCACCUUCGUGAUCA 10441 >> URS0002342870_9606 Homo sapiens (human) HSALNT0340799 E-value: 1.8e-1 Identity: 63.48% Query coverage: 55.17% Gaps: 2.61% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| || ||| Sbjct 318 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAGCCUUGCC 408 Query 155 -UAGGCCAUGACCCUUCAUGAUCG 177 | || | ||||| ||||| Sbjct 409 CUGGGAAAACCACCUUCGUGAUCA 432 >> URS0002359EE6_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007720) E-value: 1.7e-2 Identity: 63.64% Query coverage: 54.19% Gaps: 0.91% Alignment: Query 67 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCU 155 || | ||||||||||||||| | ||||||| ||| ||||| | | | | ||||| |||| | || | ||| Sbjct 2914 CCUAUUGUCACAAAUUAUGACGUAAGUUUAAUGACUUGGGUCGAUCUUAAGCAAACCACACUCCAAAGUGAAAUGGAAGUCAUCAACCU 3002 Query 156 AGGCCAUGACCCUUCAUGAUC 176 |||||||| || | ||||| Sbjct 3003 AGGCCAUGGCCUU-ACUGAUC 3022 >> URS0002371D4C_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007720) E-value: 1.7e-2 Identity: 63.64% Query coverage: 54.19% Gaps: 0.91% Alignment: Query 67 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 || | ||||||||||||||| | ||||||| ||| ||||| | | | | ||||| |||| | || | | Sbjct 12717 CCUAUUGUCACAAAUUAUGACGUAAGUUUAAUGACUUGGGUCGAUCUUAAGCAAACCACACUCCAAAGUGAAAUGGAAGUCAUCAAC 12803 Query 154 CUAGGCCAUGACCCUUCAUGAUC 176 |||||||||| || | ||||| Sbjct 12804 CUAGGCCAUGGCCUU-ACUGAUC 12825 >> URS000239BFC3_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007720) E-value: 2e-1 Identity: 51.70% Query coverage: 72.41% Gaps: 12.24% Alignment: Query 51 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAA 139 ||| | || | ||||| | || ||| ||||| | | || || | || | || ||||| Sbjct 5163 CGCACCAA------------------UGCAGUAUGAUAUAAGUUCAACCAUUUGGGUCGGGUUUCGGCGGGCACCCCUCCAAAUUGCAA 5233 Query 140 UGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGU 197 || | || | | || ||||||||||| ||| | |||| ||| || ||| Sbjct 5234 UGGUAGUUACCAACGUAAACCAUGACCCUUAUUGAACCCCCAUUGACUUAGUUCAGUA 5291 >> URS00023B6893_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007721) E-value: 2e-1 Identity: 51.70% Query coverage: 72.41% Gaps: 12.24% Alignment: Query 51 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAA 139 ||| | || | ||||| | || ||| ||||| | | || || | || | || ||||| Sbjct 6261 CGCACCAA------------------UGCAGUAUGAUAUAAGUUCAACCAUUUGGGUCGGGUUUCGGCGGGCACCCCUCCAAAUUGCAA 6331 Query 140 UGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGU 197 || | || | | || ||||||||||| ||| | |||| ||| || ||| Sbjct 6332 UGGUAGUUACCAACGUAAACCAUGACCCUUAUUGAACCCCCAUUGACUUAGUUCAGUA 6389 >> URS000241A118_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007720) E-value: 1.7e-2 Identity: 63.64% Query coverage: 54.19% Gaps: 0.91% Alignment: Query 67 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 || | ||||||||||||||| | ||||||| ||| ||||| | | | | ||||| |||| | || | | Sbjct 12727 CCUAUUGUCACAAAUUAUGACGUAAGUUUAAUGACUUGGGUCGAUCUUAAGCAAACCACACUCCAAAGUGAAAUGGAAGUCAUCAAC 12813 Query 154 CUAGGCCAUGACCCUUCAUGAUC 176 |||||||||| || | ||||| Sbjct 12814 CUAGGCCAUGGCCUU-ACUGAUC 12835 >> URS0002607790_34632 Rhipicephalus sanguineus (Brown dog tick) uncharacterized LOC119374492 E-value: 2e-1 Identity: 61.54% Query coverage: 55.67% Gaps: 4.27% Alignment: Query 30 AUUUGAAGAAUUGGCAGGGG--CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGGAGAUGGUA 115 || || | | | ||||| ||||| |||| || |||| |||||| |||||| |||| | || ||||||||| ||| Sbjct 59 UUUCGAUUAGUGGAAAGGGGGCUGGCGCGUACGCCUAGCCCCACUACCAAAAAUUACAUGCUCCAGCUACCCCGACUUGGGGAAGUGGCG 148 Query 116 AGCCAGCGCACCCACCAAGUGCAAUGU 142 || || | ||||||||| Sbjct 149 UGCUUCAGCCAG-CCGCAGUGCAAUGG 174 >> URS00000DD985_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.1e-1 Identity: 58.64% Query coverage: 72.91% Gaps: 12.35% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA-CUUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAGUGCA 138 || |||| || ||||| ||||||||||||||| ||| | | ||||| ||||||| | || | | |||| || | || | Sbjct 8 GCUUGAACAAGU-CCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCAAAUUGGGGAAACGGGCAGAGUCAGCACAU----CUGGUUCC 92 Query 139 AUGUGGGCCA-----------CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 |||| | | ||| || || | |||||| |||| |||| ||||||| Sbjct 93 AUGUCAGUUUGCAUGGAAGCCAUGUCCUGGGACACCA-CCUUCAGGAUCAUGGCCCCUCCCCCAACAGGUAA 163 >> URS00022AEDCE_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000076052.1) E-value: 2.1e-1 Identity: 63.56% Query coverage: 55.67% Gaps: 5.93% Alignment: Query 64 ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAG--CCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 | ||| ||||| ||||||||| ||| | | |||||| ||||||| || | | | |||| || | | ||||||||| || Sbjct 444 UCGCCCACUACCGCAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUC--CAGAGUGCAAUGGAUAAGCCU 532 Query 151 AGCCU-AGGCCAUGACCCUUCAUGAUC 176 ||| || | |||| ||||| Sbjct 533 UGCCCUGGGAAACCCACCUUUGUGAUC 559 >> URS0000D5CB05_9606 Homo sapiens (human) non-protein coding lnc-ZSCAN10-1:4 E-value: 2.4e-1 Identity: 64.36% Query coverage: 48.28% Gaps: 2.97% Alignment: Query 44 CAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACC 131 |||||| | ||| || ||||| ||||||||||||||| | | | | |||| ||||||||| || | | |||| | Sbjct 810 CAGGGGAAGGUAUGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGGCGAGUGUCCCACACUUGGGGAAAUCACAGGGGUCAGCACAUCCG 900 Query 132 AAGUGCAAUG 141 ||||||| Sbjct 901 GGGUGCAAUU 910 >> URS000241968D_2711 Citrus sinensis (sweet orange) long non-coding RNA (CSIN_LNC001306) E-value: 1.1e-23 Identity: 78.14% Query coverage: 89.16% Gaps: 3.28% Alignment: Query 23 AAUUUAAAUUUGAAGAAUUGGCA-GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG- 107 | ||||| | | | |||| | |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||| ||| Sbjct 61668 ACUUUAACU----AUACUUGGGAGGGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUAUGACGUAGGCUCAGCCACUUUGGGC 61750 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 || || || | ||||| | |||||||||| |||||| | |||||||||||| |||| ||||||| |||| ||||||||||| Sbjct 61751 UGACCUUAGGCGGGUGCACCUCCGAAGUGCAAUGGAGGCCACCAACCUAGGCCAUGAGCCUUAAUGAUCGCCCAUUGACCCCGUCCA 61837 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 61838 GGUAAGUAU 61846 >> URS00002BC911_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.9e-1 Identity: 57.69% Query coverage: 75.86% Gaps: 4.49% Alignment: Query 49 GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG 136 || | || || | ||||| ||||||| ||||||| ||| | | | | || || |||| || | | | | || | Sbjct 7 AGAGCUCAAAGGCAUUCCCCCACUACCACUAAUUAUGCAGUCAAGUUUGCUGCAUUUAGGGAAAUCACAUGGG-----UCAGAACAUUGG 91 Query 137 CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||| | |||| || | ||||||||||| |||| |||||||||||| Sbjct 92 GAAUGCAAUUGAUAAGCCCUGGGAAAACACCUUCAUGAUCAUAGUACCACCCAUUCCAGGUAAGUA 157 >> URS00023427EA_9606 Homo sapiens (human) HSALNT0321486 E-value: 3e-1 Identity: 64.17% Query coverage: 57.14% Gaps: 5.00% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAG--CCAGCGCACCCA 129 |||||| || | ||| ||||| ||||||||||||||| || | | |||||| |||| || || | | |||| || | Sbjct 257 GCAGGGAAAGCACAAACAAAAUCCCCCACUACCACAAAUUAUGCAGUUGAGUUUCCCACAUUUGGUGAAAUCACAGGUGUCAGCACAUC-- 345 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGG 158 | ||||||||| ||| ||| || Sbjct 346 CAGAGUGCAAUGGAUAAGACUUGCCAUGG 374 >> URS000000AA84_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.1e-1 Identity: 57.50% Query coverage: 76.35% Gaps: 4.38% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUA----AGCCAGCGCACCCACCA 132 || | || || || || || |||||||||||||| || | | |||||| | ||||| | | ||||| || | Sbjct 3 GGAGAGUGCAAAUGCAGCCCUCCACUACCACAAAUUAUACAGUUGAAUUUCCCACAUUUGGAGAAGUUGCAGGGGCCAGUACAU--GCAG 90 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGAC-CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 |||| ||| || |||| || | | |||| ||||| |||| ||||||||| Sbjct 91 AGUGAGAUGAAUAAGUCUUGCCUUGGGAAAACCAUCUUCUUGAUCACAGUAUCUCCCCUGCCAGGUAAGA 160 >> URS0000409780_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.1e-1 Identity: 59.49% Query coverage: 75.86% Gaps: 3.16% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||| | || ||||| ||||| | |||||||| |||| ||| | | ||| || ||||||| || | | |||| || Sbjct 4 GGGACAGCAUUAACGCAGUCCCCCACCACCACAAACUAUGCAGUCAAGUUUCCUGCAUUUGGGGAAAUUCCAGGGGUCAGCACAUCUGAA 93 Query 134 GUGCAAUGUGG--GCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 || ||||| ||| | ||| | || |||| |||||| |||| |||| ||| Sbjct 94 GUACAAUGGAUAAGCC-UCACCCUGGAAAAUCUACCUUUAUGAUCAUGGUAUCUCCCCUGCCAGUUAA 160 >> URS000280F642_6087 Hydra vulgaris (Swiftwater hydra) uncharacterized LOC124805855, transcript variant X4 E-value: 3.4e-1 Identity: 61.01% Query coverage: 74.88% Gaps: 6.29% Alignment: Query 51 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUGC 137 |||||||||| | || |||||| ||||||| ||| | | || || | | || || | | | |||| | | |||||| Sbjct 20 AGCGCGAACGCAGGCUUCCGCUACCAGAAAUUAUACUGUCGAGUUACCGACGUUAGCGGUAAUCGCAGAGGUCAGCCUA--GUCGAAGUGC 108 Query 138 AAUGUGG--GCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAG-ACCCCGUCCAGGUAAGUA 202 |||| ||| | | || | | | | |||| ||||| | | || ||| |||||||||| Sbjct 109 AAUGAAUAAGCCUC-ACUCUGGAAGAAGCCGCUUCGUGAUCCGACUUAACUUCCCAGUCAGGUAAGUA 175 >> URS000260874C_34632 Rhipicephalus sanguineus (Brown dog tick) uncharacterized LOC119399493 E-value: 3.5e-1 Identity: 62.10% Query coverage: 58.62% Gaps: 13.71% Alignment: Query 23 AAUUUAAAUUUGAAGAAUUGGCAGGGGCC-GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU--CCCACUUGGGGAG 109 ||||||| | || |||||| ||||| |||| || |||| |||||| |||||| |||| || |||||| Sbjct 40 AAUUUAA---------AACGGAAGGGGCUGGCGCGUACGCCUAGCCCCACUACCAAAAAUUACAUGCCCCACCUACCCCGGUUUGGGGUA 120 Query 110 AUGGUAAGC--CAGCGCACCCACCAAGUGCAAUG 141 ||| || |||| ||| | ||||||||| Sbjct 121 GUGGCGUGCUUCAGCCCAC---CGCAGUGCAAUG 151 >> URS0000E9D491_9606 Homo sapiens (human) HSALNT0064074 E-value: 3.6e-1 Identity: 59.01% Query coverage: 77.34% Gaps: 3.11% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| ||| |||| | | ||| |||| ||||| | || || | |||||| ||||||| |||| | | |||| || Sbjct 140 GGGAGCGCAUGAACACAGUCACCCACUACUACAAACUGUGCAGUUGGGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCAGCACAUCUGGAG 230 Query 135 UGCAAUGUGGGCCACUAGCCUAGGCCA-UGACCCUUCAUGAUCGGCCAUAGA-CCCCGUCCAGGUAAGUA 202 || |||| | | ||| || | |||| |||| | |||| || | |||||| |||| Sbjct 231 UGUAAUGGAUGAGCCGUGCCCUGGAAAAACCACCUUUGUGAUUGU-GAUAGCUCCUCUGCCAGGUUAGUA 299 >> URS00004E5C34_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.4e-1 Identity: 57.05% Query coverage: 75.37% Gaps: 7.05% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGC 137 || ||| || | | | |||| ||||||||||| | | | | |||||| ||||||| || | | ||| | ||| Sbjct 8 GAGCAUGAAUGCAGUCUCUCACUACAACAAAUUAUGAAGGCUAGUUUCCCACAUUUGGGGAAAUCUCAGACAUGCG--------GAAUGC 89 Query 138 AAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | || | || ||| | || | |||||||||| | | | |||||||||| Sbjct 90 AGUGGAUGAGCCUUGCCCUGGGAAAAUCACCUUCAUGAUUAGGAUGUUUCUUCCAUCAGGUAAGUA 155 >> URS00004FB451_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.4e-1 Identity: 60.00% Query coverage: 73.89% Gaps: 6.25% Alignment: Query 53 CGCGAACGCGUA--CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCA 138 || || || | ||| | ||||||||| ||| | | | |||| | |||||| ||| | | | |||| | |||||| Sbjct 9 CGUGAGUGCAGUCCCUCCCACCACCACAAAUCAUGCAGCUGAGUUUCCCGAAUUUGGGGGGAUCGCAGGGGUCUGCACAUCCGGAGUGCA 98 Query 139 AUGUGGGCCA--CUAGCCUAGGCCAUGAC--CCUUCAUGAUC--GGCCAUAGACCCCGUCCAGGUAAGUA 202 || || | || ||| || | || ||||||||||| || | || ||||||||||| Sbjct 99 AUAAGGAUAAGCCUCGCCCUGGGAAAAACCACCUUCAUGAUCAUGGUACCUCUCUCCUGCCAGGUAAGUA 168 >> URS0000CCE54A_10116 Rattus norvegicus uncharacterized LOC103691943 E-value: 4.5e-1 Identity: 65.56% Query coverage: 43.35% Gaps: 2.22% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUG 143 || ||| ||||| ||||||||||||||| ||| | ||| || ||||||| || | | | ||| | ||||||||| Sbjct 367 GAUCGCAGUCCCCCACUACCACAAAUUAUGCAGUCGCUUUUCCUGCAUUUGGGGAAAUCGCAGGGGUCAACACAUCCGGAGUGCAAUGGA 456 >> URS00000B7CAB_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.1e-1 Identity: 56.49% Query coverage: 74.38% Gaps: 1.95% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAA 139 || ||| || | ||| |||||||||||| | ||| | | ||| || ||||||| | | | | |||| ||||||| Sbjct 10 GCAUGAAUGCAGUCUCCCACUACCACAAAUUUCGCAGUCGAAUUUCCUGCAUUUGGGGAAACAGCAGGGGUCAGCACAUCUGGAGUGCAA 99 Query 140 UGUGGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || || ||| | | | |||| ||| || | ||||||||||| Sbjct 100 UGGAUAAGCCUCGCCCUGGGAAAACUACCUUUGUGACUAUGGUAUUUCCUCUGCCAGGUAAGUA 163 >> URS0001953441_158456 Betta splendens (Siamese fighting fish) lncRNA (ENSBSLG00000002776.1) E-value: 7.2e-1 Identity: 71.43% Query coverage: 33.50% Gaps: 2.86% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUA 115 | |||||||| | ||||| |||||| |||||||| ||| | ||| || |||||||||| | | Sbjct 203 GAGAGCGCGAACACAGUCCCCCACUACCAGAAAUUAUGCAGUCAAGAUUCCCACAUUUGGGGAGAUCGCA 272 >> URS0002338703_9606 Homo sapiens (human) HSALNT0321487 E-value: 7.3e-1 Identity: 63.25% Query coverage: 55.67% Gaps: 5.13% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAG--CCAGCGCACCCACCA 132 ||| || | ||| ||||| ||||||||||||||| || | | |||||| |||| || || | | |||| || | | Sbjct 40 GGGAAAGCACAAACAAAAUCCCCCACUACCACAAAUUAUGCAGUUGAGUUUCCCACAUUUGGUGAAAUCACAGGUGUCAGCACAUC--CAG 128 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGG 158 ||||||||| ||| ||| || Sbjct 129 AGUGCAAUGGAUAAGACUUGCCAUGG 154 >> URS0000EC1EB1_9606 Homo sapiens (human) HSALNT0064076 E-value: 7.4e-1 Identity: 57.24% Query coverage: 69.95% Gaps: 2.76% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACC 131 | ||| ||| |||| | | ||| |||| ||||| | || || | |||||| ||||||| |||| | | |||| Sbjct 92 UCUGGGAGCGCAUGAACACAGUCACCCACUACUACAAACUGUGCAGUUGGGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCAGCACAUCUG 182 Query 132 AAGUGCAAUGUGGGCCACUAGCCUAGGCCAU-GACCCUUCAUGAUCGGCCAUAG 184 |||| |||| | | ||| || | |||| |||| | |||| Sbjct 183 GAGUGUAAUGGAUGAGCCGUGCCCUGGAAAAACCACCUUUGUGAUUGU-GAUAG 235 >> URS00023772B6_59689 Arabidopsis lyrata (A. lyrata) long non-coding RNA (ALYR_LNC000924) E-value: 7.4e-1 Identity: 54.49% Query coverage: 72.91% Gaps: 23.72% Alignment: Query 52 GCGCGAACGCGUA--------CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACC 131 || |||| || | |||||||| |||||||| || |||| ||||||| | | Sbjct 952 GCACGAAAGCAAACCCCCCUCCCCCCUCUGCCACAAAUAAUAACGUAGACUCUCCAGC---------------------G------UU 1012 Query 132 AAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 | |||||||| | | || || |||||| || ||| |||||| | |||| |||| |||| Sbjct 1013 AUGUGCAAUGCG-GUCAUUAACCUAGGUCACUCGUCUUAUUGAUCGCGAGUCGACC-UGUCCGAGUAA 1078 >> URS00001DE2C5_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.7e-1 Identity: 62.24% Query coverage: 68.47% Gaps: 4.20% Alignment: Query 64 ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG--GCCACU 150 || || |||| |||||||||| ||| | | ||||| ||||||| || | | ||| | ||||||||| ||| Sbjct 18 UCCUCCACUACUACAAAUUAUGUGGUCGAGUUUCCCAAUUUGGGGAAAUCACAGGGGUCACCACAUCCGGAGUGCAAUGGAUAAGCCU-C 106 Query 151 AGCCUAGGCCAUGACCCUUCAUGAUCG-GCCAUAGACCCCGUCCAGGUAAGUA 202 | ||| || | ||| ||||| | ||| |||| | | ||||||||| Sbjct 107 ACCCUGGGAAAACCACCUAUGUGAUCAUGGCAUCUACCCUG-CUAGGUAAGUA 158 >> URS00027F7ABC_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015035420.1) E-value: 7.8e-1 Identity: 59.13% Query coverage: 56.16% Gaps: 0.87% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU-AG 152 | | ||||||||||||||| | | ||| ||| | | ||||| | | ||| || ||||||||| | || | Sbjct 1238 CUCUACUACCACAAAUUAUGCAGCCGACUUUCCUGCAUUUGGAGAAAUCAUGGGUUAGCAUCCCUGGAGUGCAAUGGAUGAGCCUCAC 1325 Query 153 CCUAGGCCAUGACCCUUCAUGAUCGGC 179 | |||| | || |||||||| Sbjct 1326 CUUAGGAAAAUCACCCUCAUGAUCAUG 1352 >> URS00027F8618_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015035420.1) E-value: 7.8e-1 Identity: 59.13% Query coverage: 56.16% Gaps: 0.87% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU-AG 152 | | ||||||||||||||| | | ||| ||| | | ||||| | | ||| || ||||||||| | || | Sbjct 2912 CUCUACUACCACAAAUUAUGCAGCCGACUUUCCUGCAUUUGGAGAAAUCAUGGGUUAGCAUCCCUGGAGUGCAAUGGAUGAGCCUCAC 2999 Query 153 CCUAGGCCAUGACCCUUCAUGAUCGGC 179 | |||| | || |||||||| Sbjct 3000 CUUAGGAAAAUCACCCUCAUGAUCAUG 3026 >> URS00027FC3B3_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015035420.1) E-value: 7.8e-1 Identity: 59.13% Query coverage: 56.16% Gaps: 0.87% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU-AG 152 | | ||||||||||||||| | | ||| ||| | | ||||| | | ||| || ||||||||| | || | Sbjct 1833 CUCUACUACCACAAAUUAUGCAGCCGACUUUCCUGCAUUUGGAGAAAUCAUGGGUUAGCAUCCCUGGAGUGCAAUGGAUGAGCCUCAC 1920 Query 153 CCUAGGCCAUGACCCUUCAUGAUCGGC 179 | |||| | || |||||||| Sbjct 1921 CUUAGGAAAAUCACCCUCAUGAUCAUG 1947 >> URS0000120EDC_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.8e-1 Identity: 63.46% Query coverage: 73.40% Gaps: 5.77% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAGUGCAA 139 ||||| | || | || ||||||||||| || | | ||| || || |||| || | | |||| | ||| ||||||| Sbjct 10 GCGAAUGUAGUCCUCUACUUUCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCAG-GAGUGCAA 98 Query 140 UG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAG-ACCCCGUCCAGGUAAGUA 202 | || |||| |||||| | | |||||||| || || |||| |||||||||||| Sbjct 99 UAGAUGAGCCA-UAGCCUGAGAAAACCACCUUCAUGGUCAUGAUUAUUUCCCCUUCCAGGUAAGUA 163 >> URS00023F002F_3694 Populus trichocarpa (black cottonwood) long non-coding RNA (PTRI_LNC001676) E-value: 4.5e-25 Identity: 82.53% Query coverage: 81.28% Gaps: 1.20% Alignment: Query 39 AUUGGCAGGGGCCGCG-CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGC 124 | | ||||||||||| | | ||| |||||||||||||||||| |||||| |||||||||||||||||||||| ||| | | || Sbjct 27369 UUAGACAGGGGCCGCGGCUAGCGCAGGCCCCCUCUACCACAAAUUUUGACGUACACUCUCCCACUUGGGGAGAUGUUAAACUGGUGC 27455 Query 125 ACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||| | ||||||||| ||||| |||||||||| ||| |||| |||||| ||| ||||||||||||||||||||| Sbjct 27456 ACCCGCUGAGUGCAAUGCUAGCCACCAGCCUAGGCC-UGAGCCUUAUUGAUCGCCCAAAGACCCCGUCCAGGUAAGUAU 27533 >> URS000012B775_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.3e+0 Identity: 57.89% Query coverage: 73.89% Gaps: 1.32% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUG 141 | ||| | ||||| ||||||||||||| || | | |||||| || |||| || | | | |||| ||| | || Sbjct 12 ACAAACACAGUCCCCCACUACCACAAAUUACAGAGUUGAGUUUCCCACAUUUAGGGAAAUCGCAUGGGUCAGCACAUCUGGAGUUCGAUA 101 Query 142 UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 || ||| || | ||| ||||||| |||| |||||||||||| Sbjct 102 GAUAAGUCUGGCCCUGGAAAACCACCUCCAUGAUCAUGGCAUCUCCCCUGCCAGGUAAGUAU 163 >> URS0000E72CDB_96440 Salvator merianae (Argentine black and white tegu) lncRNA (ENSSMRG00000021866.1) E-value: 1.3e+0 Identity: 63.64% Query coverage: 57.14% Gaps: 5.79% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAG--CCAGCGCACCCACCAAGUGCAAUGU-GGGC 146 | | ||| ||||||||||| ||| ||| | | |||||| ||||||| || | | |||| || || ||||||| | | Sbjct 484 GAAUUCCCACUACCACAAAUNAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCACAGGGGUCAGCACAGCC--AGAGUGCAACGGCCGAG 571 Query 147 CACUAGCCUAGGCCAUGACCCUUCAUGAUCG 177 | | | ||| || | ||||||||| | Sbjct 572 CCCCACCCUGGGAGAACCUCCUUCAUGACCA 602 >> URS0000127C31_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.7e+0 Identity: 57.24% Query coverage: 70.44% Gaps: 1.38% Alignment: Query 60 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCC 147 || |||| ||||||||||||||| || | | ||| || ||||||| | | | |||| | ||||||||| Sbjct 10 GCAGUCCCCUACUACCACAAAUUAUGCAGUUGAGUUUCCGGCAUUUGGGGAAACCACAGGGGUCAGCACAUCCGGAGUGCAAUGGAUAAG 99 Query 148 ACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || ||| || | | ||| |||| || ||||||||||| Sbjct 100 CCUGACCUGGGAAACCAAUCUUUCUGAUUAUGGUAUCUCCUGUGCCAGGUAAGUA 154 >> URS000051777C_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.7e+0 Identity: 60.49% Query coverage: 76.85% Gaps: 5.56% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAG--CCAGCGCACCCACC 131 ||| | ||| |||| | ||||| | | |||||||||| ||| | | ||| | |||| || || | | | |||| || | | Sbjct 4 GGGACAGCGUGAACACAGUCCCCCACACCUACAAAUUAUGCAGUCGAGUUUCCUGAAUUUGGAGAAAUCGCAGGGGUCAGCACAUC--CA 91 Query 132 AAGUGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||||||| | | || ||| ||| || | | ||| ||||| |||| ||| ||||| Sbjct 92 GAGUGCAACGGAUAAACCUCUA-CCUGGGAAAACCACUUUCGUGAUCAUGGUAUCUCCCCUGCCAAAUAAGU 162 >> URS0000EF560D_9606 Homo sapiens (human) novel transcript, antisense to SLC2A2 E-value: 1.8e+0 Identity: 57.78% Query coverage: 65.02% Gaps: 2.22% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| ||| |||| | | ||| |||| ||||| | || || | |||||| ||||||| |||| | | |||| || Sbjct 139 GGGAGCGCAUGAACACAGUCACCCACUACUACAAACUGUGCAGUUGGGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCAGCACAUCUGGAG 229 Query 135 UGCAAUGUGGGCCACUAGCCUAGGCCAU-GACCCUUCAUGAUCG 177 || |||| | | ||| || | |||| |||| | Sbjct 230 UGUAAUGGAUGAGCCGUGCCCUGGAAAAACCACCUUUGUGAUUG 273 >> URS0000050376_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.9e+0 Identity: 61.15% Query coverage: 66.50% Gaps: 3.60% Alignment: Query 68 CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCU 155 || ||||||||||||||| ||| | | |||||| | ||| | || | | | |||| || | ||||||| | || |||| Sbjct 2 CCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUACGGGAAAAUCACAGGGCUCAGCACAUACAGAAUGCAAUGGAUGAGCCUUGCCU 91 Query 156 AGGCCAUGACCCUUCAUG--AUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || | ||| || || ||| || ||||||||||| Sbjct 92 UGGGAAA-ACCUUUUUUGUAAUCAUGGUGUCUCCUUUGCCAGGUAAGUA 139 >> URS0002352336_66656 Durio zibethinus (D. zibethinus) long non-coding RNA (DZIB_LNC001488) E-value: 7.3e-22 Identity: 74.59% Query coverage: 89.16% Gaps: 0.55% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 109 | |||| || || | | | || | |||||||||||| |||| || |||||||||||||||| ||||||||||||||||| Sbjct 8140 AUAUUUGAAA-CCAAUAUUGUGUAGAGACCGCGCGAACGCAGGUCCCCGCUGCCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAG 8226 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGU 197 | || |||| | || |||||||||||| | |||| |||| |||||| |||| |||||| |||| ||||||||||||| Sbjct 8227 ACCUUAGAGCAGCACCCCACCCAAGUGCAAUGGAAGUCACUGCCCUAAGCCAUGGGUCUUCUUGAUCGCCCAUUAACCCCGUCCAGGU 8314 Query 198 AAGUA 202 ||||| Sbjct 8315 AAGUA 8319 >> URS0002369BAB_66656 Durio zibethinus (D. zibethinus) long non-coding RNA (DZIB_LNC001489) E-value: 2.1e-18 Identity: 71.12% Query coverage: 92.12% Gaps: 1.07% Alignment: Query 17 GAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 102 || || |||| || || | | || |||| ||||||||| || ||||| || |||||||||||||||| || | ||||| Sbjct 10028 GAAGAAUAUUUGAAA-CCAAUAUUGGGUAGGGACCGCGCGAAUGCAGGCCCCCGCUGCCACAAAUUAUGACGUAGGCUUU-CCACU 10111 Query 103 UGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCC 188 |||| ||| || | || | || ||||||||||| | || | ||||||||||| ||| ||||| |||| ||||| Sbjct 10112 UGGGAAGACCUUAGAGCCGCACCCCUCCCAAGUGCAAUAGAAGUCAUUGCCCUAGGCCAUGGGUCUUAUUGAUCAUCCAUUGACCC 10197 Query 189 CGUCCAGGUAAGUAU 203 ||||||||||||| Sbjct 10198 UAUCCAGGUAAGUAU 10212 >> URS000236DBB5_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002933) E-value: 6.1e-25 Identity: 79.35% Query coverage: 88.67% Gaps: 2.17% Alignment: Query 24 AUUUAAAUUUGA--AGAAUUGGCAG-GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU-GG 105 || |||||| | ||| |||| || ||||||||||||||| ||||| || |||||||||||||||| ||| |||||| || Sbjct 10238 AUAAAAAUUUAACGAGAGUUGGGAGGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCAACCACUUUGG 10323 Query 106 GGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGU 191 | || || || | ||||| |||||||||||| |||||| | ||||||||||| |||||||||||| |||| |||||||| Sbjct 10324 GUUGACCUUAGGCGGGUGCACCUCCCAAGUGCAAUGGAGGCCACCAACCUAGGCCAUGGGCCUUCAUGAUCGCCCAUUGACCCCGU 10409 Query 192 CCAGGUAAGUAU 203 |||||||||||| Sbjct 10410 CCAGGUAAGUAU 10421 >> URS00008B2E1F_9606 Homo sapiens (human) non-protein coding lnc-SEC61G-7:5 E-value: 2e+0 Identity: 63.74% Query coverage: 43.84% Gaps: 7.69% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| |||| Sbjct 307 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAU-----AAGCC 392 >> URS00008BD3C8_9606 Homo sapiens (human) non-protein coding lnc-SEC61G-7:9 E-value: 2e+0 Identity: 63.74% Query coverage: 43.84% Gaps: 7.69% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | ||| | ||||||||| |||| Sbjct 438 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAU-----AAGCC 523 >> URS0000097C92_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.1e+0 Identity: 56.76% Query coverage: 70.44% Gaps: 4.73% Alignment: Query 59 CGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UU-GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGC 146 || || || ||||||||||||||| ||| | ||||| || ||| | |||| ||| |||| | | || |||| Sbjct 17 UGCAGACACCUGCUACCACAAAUUAUGCAGUCAUGUUUCCCAAAUUGGGGAAAAUGGCAAGGGUCAGCACAUUCAGA--GCUCAGUGGAU 104 Query 147 CA---CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | | || ||| | ||||| ||||| || |||| ||||| Sbjct 105 AAGCCUUGCCCCAGGAAAACCACCUUCGUGAUCAUGGUAUCUCCGAUGCCAGUUAAGU 162 >> URS00023DF02C_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC001234) E-value: 1.1e-23 Identity: 74.86% Query coverage: 90.15% Gaps: 1.64% Alignment: Query 21 AAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 | ||||| | ||||||||| |||||| |||||||||| ||||| || | |||||||||||||| ||| ||||||||| Sbjct 28177 A-AAUUUUG--CUUAAGAAUUGGUAGGGGCUGCGCGAACGCAAGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCGACCACUUGGGU 28260 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 || || | || | || | |||||||||| || ||| | ||||||||||| ||| |||||| |||| ||||||||||| Sbjct 28261 CGACCUUAGGUAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAACCUAGGCCAUGGGUCUUAUUGAUCGCCCAUUGACCCCGUCCA 28347 Query 195 GGUAAGUAU 203 ||||||||| Sbjct 28348 GGUAAGUAU 28356 >> URS000054C26E_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.5e+0 Identity: 57.53% Query coverage: 70.44% Gaps: 7.53% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAG--CCAGCGCACCCACCAAGUGCAAUGUG 143 |||| |||| ||| |||||||||||| |||| || ||| ||| | | | |||| || | | |||||||||| | Sbjct 11 GAACAU--GUCCCCACUAACACAAAUUAUGAAGUCCC----UGCAUUUGAGGAAGUCUCAGGGGUCAGCACAUC--CAAAGUGCAAUGGG 92 Query 144 GGCCACUAGCCUAGGCC-AUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUA 198 || ||| || | |||| ||| | |||| ||||||| Sbjct 93 UAAACCUUGCCCUGGGAAAACCACCUUUGUGACCAUGGUGUCUCCCCUGCCAGGUA 148 >> URS000260D24C_34632 Rhipicephalus sanguineus (Brown dog tick) uncharacterized LOC119384947 E-value: 2.5e+0 Identity: 63.25% Query coverage: 53.69% Gaps: 10.26% Alignment: Query 35 AAGAAUUGG--CAGGGGC-CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCC--ACUCUCCCACUUGGGGA-GAUGG--UAA 116 |||||| |||| || |||||||||| | |||| |||||| ||||| | || || |||| || |||| ||| | Sbjct 39 UUGAAUUGAUACAGGAGCUGGCGCGAACGCCAAGCCCCACUACCAAAAAUUGCAU-GCCCCAUCUAUCCCUGUUUGGGAAAGUGGCGUGC 127 Query 117 GCCAGCGCACCCACCAAGUGCAAUGUG 143 | |||| ||| ||||||||| Sbjct 128 GUCAGCCAACC---GCAGUGCAAUGGU 151 >> URS0000407D1B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.8e+0 Identity: 67.00% Query coverage: 47.29% Gaps: 6.00% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAG--CCAGCGCACCCACC 131 |||| || | || || ||||| ||||| |||||||| ||| | | |||| | ||||||| || | | | |||| | ||| Sbjct 4 GGGGGGGCACAAAGGCAGUCCCCCACUACCCCAAAUUAUUCAGUCUAGUUUCCCGAAUUUGGGGAAAUUGCAGGGAUCAGCAUAUCCAG- 92 Query 132 AAGUGCAAUG 141 |||||||| Sbjct 93 -CGUGCAAUG 101 >> URS00019A2A37_85681 Citrus clementina U1 spliceosomal RNA E-value: 2.8e+0 Identity: 78.00% Query coverage: 24.63% Gaps: 0.00% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU 94 |||||||||||||||| |||| || |||||||||||| ||| || Sbjct 3 GGGGGCCGCGCGAACGCAGGCCCCUACUGCCACAAAUUAUGUCGUAUACA 52 >> URS00001BF248_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.9e+0 Identity: 59.74% Query coverage: 72.91% Gaps: 5.84% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUGC 137 || |||| | ||||| ||||||||||||||| || | | | |||| ||||||| | | || || || | || || Sbjct 10 GCAUGAACACAGUCCCCCACUACCACAAAUUAUGCAGUUGAGUGUUCCACAUUUGGGGAAACCACAGGAGUCAAUACAUCU--GGAGAGC 97 Query 138 AAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 || | ||| | ||| || | |||||||||| | | || ||||||||| Sbjct 98 AACAGAUAAGCC-UUGCCCUGGGAAACCCACCUUCAUGAUGAUGCUAUUGCUCCUUCCAGGUAA 160 >> URS00001F928C_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.1e+0 Identity: 60.83% Query coverage: 57.14% Gaps: 5.00% Alignment: Query 60 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAGUGCAAUGUGGG 145 || ||||| | |||||||||||| ||| | | |||||| ||||||| || | | |||| ||| |||||| || Sbjct 21 GCUGUCCCCCAAUUCCACAAAUUAUGUAGUCAAGUUUCCCACAUUUGGGGAAAUCAGAGGGGUCAGCACAC--CUGGAGUGCACUGGACA 108 Query 146 CCACUAGCCUAGGCCAUGACCCUUCAUGAU 175 | | ||| || | |||| |||| Sbjct 109 AGAUCAACCUGGGUACACAAGCUUCCUGAU 138 >> URS00002E677B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.1e+0 Identity: 67.05% Query coverage: 41.38% Gaps: 6.82% Alignment: Query 53 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAG--CCAGCGCACCCACCAAGUG 136 | ||| || | ||| ||||||||||||||| ||| | | |||||| ||||||| | | | | ||| || ||| |||| Sbjct 11 CAUGAAUGCAGUCUCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCACAUUUGGGGAAACUGCAGGGGUCAGGACAUCCA--GAGUG 96 >> URS000048B7EE_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.2e+0 Identity: 57.42% Query coverage: 74.88% Gaps: 1.94% Alignment: Query 51 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCA 138 | | ||| | |||| ||||||||||||||| || | | | ||| ||||||| || | | |||| | |||| Sbjct 8 AGUGUCAACACAGUUCCCCACUACCACAAAUUAUGCACUCAAGUUUUCCAGCUUUGGGGAUAUCUCAGGGUUCAGCACAUCUGACAUGCA 97 Query 139 AUGUGGGCCACUAG-CCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||| || | ||| ||| | |||| ||||| | |||| ||| |||||| Sbjct 98 AUGGAUAAGCCUUGCCCUGGGCUAAACACCUUUGUGAUCAUGGCUUAUCCCCUGCCAACUAAGUA 162 >> URS000234B63D_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC008693) E-value: 3.4e+0 Identity: 74.32% Query coverage: 34.98% Gaps: 4.05% Alignment: Query 131 CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAU--GACCCUUCAUGAUCG-GCCAUAGACCCCGUCCAGGUAAGU 201 |||||||||| || ||| | |||| |||| | | || |||||| |||| ||||||||||| |||||| Sbjct 7100 UAAGUGCAAUGAAGGUCACGAACCUAAUCCAUAUGCCUCUAUAUGAUCACACCAUUGACCCCGUCCAAGUAAGU 7173 >> URS00023CD93C_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC008693) E-value: 3.4e+0 Identity: 74.32% Query coverage: 34.98% Gaps: 4.05% Alignment: Query 131 CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAU--GACCCUUCAUGAUCG-GCCAUAGACCCCGUCCAGGUAAGU 201 |||||||||| || ||| | |||| |||| | | || |||||| |||| ||||||||||| |||||| Sbjct 7566 UAAGUGCAAUGAAGGUCACGAACCUAAUCCAUAUGCCUCUAUAUGAUCACACCAUUGACCCCGUCCAAGUAAGU 7639 >> URS0002407E71_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC008693) E-value: 3.4e+0 Identity: 74.32% Query coverage: 34.98% Gaps: 4.05% Alignment: Query 131 CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAU--GACCCUUCAUGAUCG-GCCAUAGACCCCGUCCAGGUAAGU 201 |||||||||| || ||| | |||| |||| | | || |||||| |||| ||||||||||| |||||| Sbjct 7581 UAAGUGCAAUGAAGGUCACGAACCUAAUCCAUAUGCCUCUAUAUGAUCACACCAUUGACCCCGUCCAAGUAAGU 7654 >> URS00005A8181_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.5e+0 Identity: 60.53% Query coverage: 71.43% Gaps: 7.89% Alignment: Query 58 ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA-CUCUCCCACUUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUGCAAUGUGG 144 || | ||||| ||||||| ||||||| | || | || ||||||| || | | | ||| || ||| ||||||||| | Sbjct 14 ACACAGUCCCCCACUACCACGUAUUAUGAAUUGAGUUUCCCACAUUUGGGGAAAUCGCAGAGGUCAGGACAUCCA--GAGUGCAAUGGGC 101 Query 145 GCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGA----CCCCGUCCAGGUAAGUA 202 || ||| || ||| | ||| || ||| || |||| | |||||||| Sbjct 102 AAGCCUCGCCCUGGGA-AAACCAUCUAUG--CGAUCAUGGAAUCUCCCCUGGCGGGUAAGUA 160 >> URS00005DD576_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.6e+0 Identity: 65.22% Query coverage: 44.33% Gaps: 2.17% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAA 139 | | ||| || ||||| ||||||||||||||| ||| | | | || | ||||||| || | | |||| ||||||| Sbjct 10 GUGUGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUACCGAAUUUGGGGAAAUCACAGGGGUCAGCACAUCUGGAGUGCAA 99 Query 140 UG 141 || Sbjct 100 UG 101 >> URS00022AFC7F_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000076052.1) E-value: 3.7e+0 Identity: 70.73% Query coverage: 38.42% Gaps: 7.32% Alignment: Query 64 ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAG--CCAGCGCACCCACCAAGUGCAAUG 141 | ||| ||||| ||||||||| ||| | | |||||| ||||||| || | | | |||| || || ||||||||| Sbjct 1296 UCGCCCACUACCGCAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUCC--AGAGUGCAAUG 1375 >> URS0000119A44_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.9e+0 Identity: 60.48% Query coverage: 59.61% Gaps: 4.03% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUG 143 |||||| | | ||| |||||||||| ||| | | ||| || ||||||| || | | | |||| | ||||||||| Sbjct 10 GAACGC--AGUCAUGCUAUUACAAAUUAUGCAGUCAAGUUUCCUGCAUUUGGGGAAAUUGCAGGGGUCUGCACAUCCAGAGUGCAAUGGA 97 Query 144 GGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUC 176 || ||| | | | ||||| ||||| Sbjct 98 UAAGCCUCGCCCUGGGAAAACCACCUUCUUGAUC 131 >> URS00002BC1B2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.9e+0 Identity: 67.47% Query coverage: 39.90% Gaps: 2.41% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGU 142 || |||| ||||||||||| ||| ||| | | || || ||||||| || ||| |||| | | ||||||||| Sbjct 21 GUCCCCCUACUACCACAAAUAAUGCAGUCAAGUUUCUAGCAUUUGGGGAAAUCACAAGGGUCAGCACACCCAGAGUGCAAUGG 103 >> URS0000376F46_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.9e+0 Identity: 58.44% Query coverage: 73.40% Gaps: 4.55% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUGCAA 139 | || ||| |||| ||||||||||||||| || | | || ||| | | || || | | |||| || ||| | || || Sbjct 9 GUGAGCGCAGUUCCCCACUACCACAAAUUAUGCAGUUGAGUUUCUCACAUUUGUAGAAAUCACAGGGGUCAGCACAUCCAUAA--UGAAA 96 Query 140 UGUG-GGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || | | | ||| || | ||| ||||| |||| ||||||||||| Sbjct 97 UGGAUAAGCUCCACCCUGGGAAAACCACCUCUGUGAUCAUGGUAUCUCCCCUACCAGGUAAGUA 160 >> URS00002458D6_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.1e+0 Identity: 60.54% Query coverage: 67.98% Gaps: 7.48% Alignment: Query 64 ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUGCAAUGUGGG---- 145 |||| ||||||||||||||| ||| | | ||| || ||||||| || | || || | || ||| ||||||||| Sbjct 22 UCCCCUACUACCACAAAUUAUGCAGUCAAGUUUCCUGCAUUUGGGGAAAUCUCAGGAGUCACCACAUCCA--GAGUGCAAUGGAUAAUCC 109 Query 146 CCACUAGCCUAGGCCAUG-ACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||| ||| || | ||||| ||||| |||| ||||||| | Sbjct 110 UCACCCGCCCUGGUAAAACCACCUUCCUGAUCAUGGUAUCUCCCCUGACAGGUAAAU 166 >> URS00023D375E_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC028250) E-value: 4.2e+0 Identity: 61.86% Query coverage: 57.64% Gaps: 1.69% Alignment: Query 85 GACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCC-AGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAU 172 ||| | ||| | |||||||| | || | | | || |||| ||| | || ||| | | ||||||| ||||| | Sbjct 2495 GACAUAGGCUCGACAACUUGGGGCUGACCUUAGUCGGGUACCCCUCUGAAGUCCAACGGAGGACACCAAGCCCAGCCAUGAGCCUUC-U 2582 Query 173 GAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||||| || |||||||| |||||| Sbjct 2583 GAUCGUCCCAUUGACCCGUCCAUGUAAGU 2611 >> URS000240A895_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC028250) E-value: 4.2e+0 Identity: 61.86% Query coverage: 57.64% Gaps: 1.69% Alignment: Query 85 GACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCC-AGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAU 172 ||| | ||| | |||||||| | || | | | || |||| ||| | || ||| | | ||||||| ||||| | Sbjct 2500 GACAUAGGCUCGACAACUUGGGGCUGACCUUAGUCGGGUACCCCUCUGAAGUCCAACGGAGGACACCAAGCCCAGCCAUGAGCCUUC-U 2587 Query 173 GAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||||| || |||||||| |||||| Sbjct 2588 GAUCGUCCCAUUGACCCGUCCAUGUAAGU 2616 >> URS000240B685_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC028250) E-value: 4.2e+0 Identity: 61.86% Query coverage: 57.64% Gaps: 1.69% Alignment: Query 85 GACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCC-AGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAU 172 ||| | ||| | |||||||| | || | | | || |||| ||| | || ||| | | ||||||| ||||| | Sbjct 2480 GACAUAGGCUCGACAACUUGGGGCUGACCUUAGUCGGGUACCCCUCUGAAGUCCAACGGAGGACACCAAGCCCAGCCAUGAGCCUUC-U 2567 Query 173 GAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||||| || |||||||| |||||| Sbjct 2568 GAUCGUCCCAUUGACCCGUCCAUGUAAGU 2596 >> URS00005B57AC_6239 Caenorhabditis elegans Unclassified non-coding RNA T27E4.15 E-value: 4.4e+0 Identity: 64.53% Query coverage: 76.85% Gaps: 12.79% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUAC-CACAAAUUAUGACGU---CCACUCUCCCACUUGGG--------GAGAUGGUAAGCCAGCGCA 125 |||||||||| |||| |||| ||| || |||||| | || | | |||| ||| | | |||| | || |||| || Sbjct 7 GGGCCGCGCGCACGCA--GCCCCGAUACGCAAAAAUUAAGCUGUUGGCGAAUCUC-AACUCGAGACUGCCCUGAGACUGCGAGUCAGCCCA 94 Query 126 CCCACCAAGUGCAAUG--UGGGCCACUAGCCUAGGCCAUG-ACCCUUCAUGAUCG-GCCAUAGACCCCGUCCAGGUAAGUA 202 ||| |||||||||| | |||| | || || || |||||||||||| | ||| |||| |||||||||| Sbjct 95 UCCAA-AAGUGCAAUGGAUAGGCC--UCACCAUGGGGAUCCCGCCUUCAUGAUCGCGAGAUAACCCCCAGCCAGGUAAGUU 172 >> URS0000E88497_10103 Mus spicilegus (steppe mouse) lncRNA (ENSMSIG00000010641.1) E-value: 4.4e+0 Identity: 58.39% Query coverage: 66.01% Gaps: 3.65% Alignment: Query 69 CUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGG--UAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUA 156 ||||||||||||||| | ||| ||| | | |||| | | | | | ||| || ||||||||| | || ||| Sbjct 526 UGCUACCACAAAUUAUGCAGCUGACUUUCCUGCCUUUGGAGGAGUCACAGGUUAACAUACCUAC--AGUGCAAUGGAUGAGCCUCACCUU 613 Query 157 GGCCA-UGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || | || ||||| || |||| ||||||||||| Sbjct 614 GGGAAAAUCACCCUCAUGGUCAUGAGAUCUCCCCUGCCAGGUAAGUA 660 >> URS00005602E6_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.7e+0 Identity: 58.87% Query coverage: 60.10% Gaps: 1.61% Alignment: Query 55 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGU 142 || | | ||||| ||||||||||||||| || | | ||| | ||||| | || | | | |||| |||||| || Sbjct 13 GGACCACAGUCCCCCACUACCACAAAUUAUGUAGUUGAAUUUCCUGUAUUUGGGAAAAUCGCAGGGGUCAGCACAUCUGGAGUGCAUUGG 102 Query 143 GGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 || ||| || | ||||| ||||| Sbjct 103 AUAAGUCUGGCCCGGGAAAACUACCUUCGUGAUC 136 >> URS00019CA8FE_506608 Cinara cedri non-coding RNA E-value: 4.7e+0 Identity: 56.28% Query coverage: 91.13% Gaps: 9.05% Alignment: Query 18 AGCAAAAUUUAAAUUUGAAG-------AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 99 || || | | || | ||| ||| |||| | |||||||||| ||| |||||| |||||||| | | || Sbjct 63 AGUCAAUUGUUGAUAUUAAGCUCAUUUCAUUAUAAGGGACGGCGCGAACGCAGU-CCCAGCUACCAAAAAUUAUGCGUCCGAGGUAUCC 150 Query 100 AC-UUGGGGAGAU-GGUAAG--CCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCC-AUGACCCUUCAUGAUCGGCCAUA 183 || || |||| | | | | || | | | | |||||||| | || ||| || | ||| ||||| | | Sbjct 151 ACAUUAGGGAUACUCGCAGGGGUCAAC--CCAGUCGAUGUGCAAUGACCGGGCCUCGCCCUGGAGGAACCGCCUAUUUGAUCA-CGGUU 236 Query 184 GACCCC--GUCCAGGUAAGUA 202 |||| | ||||||||||| Sbjct 237 GACCUCCACGCCAGGUAAGUA 257 >> URS00001E3C3B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8e+0 Identity: 57.24% Query coverage: 69.46% Gaps: 2.76% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCAC--UCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCAC 149 | || ||||||||||||||| || | |||| || ||||||| | | | | ||||| | |||| || | | Sbjct 20 AGUCUCCUACUACCACAAAUUAUGCAGUGGAGCAUCUCACAUUUGGGGAACUUGCUGGGCUCCGCACGUCCAGAGUGUAAAGGAUAAGCC 109 Query 150 UAGCCUAGGCCAUGAC--CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | | || || | || |||| ||||| ||| |||| |||||| Sbjct 110 UCGUCUUGGGAAAUACCACCUUUGUGAUCACGACAUCUCCCUUGCCAGCUAAGUA 164 >> URS0000BB0A26_6335 Trichinella nativa U1 spliceosomal RNA E-value: 8.1e+0 Identity: 59.15% Query coverage: 77.34% Gaps: 6.71% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC-UCCCACUUGGGGAGAUGGU-----AAGCCAGCGCACCCACC 131 ||| |||||||||| |||| | | ||| ||| |||| || | | ||||| || |||| | | | ||| | | | Sbjct 4 GGGUGGCGCGAACGCCGACCCUCACACCCAAAAACUAUGCAGUGAGCACGUCCCAGUUCGGGACG--GCCCCAGAGGUCAG--CUGCUUCG 90 Query 132 AAGUGCAAUGUGGGCCACU-AGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||||| || | ||| | | |||| ||||| | | | ||| |||||||||||| Sbjct 91 GAGUGCAAUGAAUCAGCCUCACCCUGGAAGUUCGAUCUUCCUGAUCAUCGAAACUUCCCUGCCAGGUAAGUAU 163 >> URS0000272E27_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.8e+0 Identity: 57.05% Query coverage: 69.46% Gaps: 6.71% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU-----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG 144 ||||| | |||| |||||||| | | | | ||| || ||||| | || || | ||| || || ||||||||| Sbjct 20 AGUCCCCCACAACCAUAAAUUAUGCAGCCGAGUUUCCUACAUUUGGGAAAAUUGGGGGGGGGGGUAGCACAGCC--AGAGUGCAAUGGAU 107 Query 145 GCCACUAGCCUAG-GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || ||| | | | ||||| |||| |||| |||| |||||| Sbjct 108 AAGCCUCGCCCUGGGAAAACCACCUUCGAGAUCAUUGUAUAUCCCCUGCCAGCUAAGUA 166 >> URS00004A6080_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.6e+0 Identity: 55.33% Query coverage: 68.47% Gaps: 11.33% Alignment: Query 57 AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAA-----GCCAGCGCACCCACCAAGUGCAAUG 141 ||| |||| ||||||||||||||| ||| | | ||| | | || || | | | |||| || | ||||||||| Sbjct 15 AACAUAGUCCCCUACUACCACAAAUUAUGCAGUCAAGUUUCCUGCCUUUGGGGACAAUUACAGGGGUCAGCACA--AUCAUAGUGCAAUG 102 Query 142 UGGGCCACUAGCCUAGGCCAUGA------CCCUUCAUGAUCGGCCAUAGACCCCGUCCAG 195 |||||| || || ||||| ||||| |||| |||| Sbjct 103 GAU----UAAGCCUAACCCUGGAAAAACCACCUUCGUGAUCAUGGGCUCUCCCCUGCCAG 158 >> URS00027E74E5_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034700.1) E-value: 1e+1 Identity: 61.44% Query coverage: 71.92% Gaps: 5.88% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--GCCAGCGCACCCACCAA 133 ||||| | || | || ||||||||||| || | | ||| || || |||| || | | |||| | ||| | Sbjct 28368 AUGCGAAUGUAGUCCUCUACUUUCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCAG-GA 28452 Query 134 GUGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAG-ACCCCGUCCAGGU 197 ||||||| || |||| |||||| | | |||||||| || || |||| ||||||| Sbjct 28453 GUGCAAUAGAUGAGCCA-UAGCCUGAGAAAACCACCUUCAUGGUCAUGAUUAUUUCCCCUUCCAGGU 28518 >> URS00027F0117_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034700.1) E-value: 1.1e+1 Identity: 61.84% Query coverage: 71.43% Gaps: 5.92% Alignment: Query 53 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAG 134 ||||| | || | || ||||||||||| || | | ||| || || |||| || | | |||| | ||| || Sbjct 22808 UGCGAAUGUAGUCCUCUACUUUCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCAG-GAG 22892 Query 135 UGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAG-ACCCCGUCCAGGU 197 |||||| || |||| |||||| | | |||||||| || || |||| ||||||| Sbjct 22893 UGCAAUAGAUGAGCCA-UAGCCUGAGAAAACCACCUUCAUGGUCAUGAUUAUUUCCCCUUCCAGGU 22957 >> URS00027E7E3C_9796 Equus caballus (horse) lncRNA (ENSECAG00000046291.1) E-value: 1.2e+1 Identity: 59.32% Query coverage: 56.16% Gaps: 5.93% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUA--AGCCAGCGCACCCACCAA 133 || | | |||| | || || ||| ||| ||||||| ||| | | |||||| ||||| | || | | | ||||| ||| | Sbjct 146 GGAAAGUGAGAACACAGUCCGCCACUAUCACCAAUUAUGCAGUCAAGUUUCCCACAGUUGGGUAAAUCGCAGAGGUCAGCGUUUCCAAC-- 234 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCC 160 | ||| | ||| ||| || Sbjct 235 -UUGGAUGGAUGAAACUUGCCCUGGGA 260 >> URS00002D2B58_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.5e+1 Identity: 57.69% Query coverage: 62.56% Gaps: 2.31% Alignment: Query 51 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCA 138 | | ||| | |||| ||||||||||||||| || | | | ||| ||||||| || | | |||| | |||| Sbjct 8 AGUGUCAACACAGUUCCCCACUACCACAAAUUAUGCACUCAAGUUUUCCAGCUUUGGGGAUAUCUCAGGGUUCAGCACAUCUGACAUGCA 97 Query 139 AUGUGGGCCACUAGC-CUAGGCCAUGACCCUUCAUGAUCG 177 ||| || || || ||| | |||| ||||| Sbjct 98 AUGGAUAAGCCUUGCCCUGGGCUAAACACCUUUGUGAUCA 137 >> URS00019F2507_506608 Cinara cedri non-coding RNA E-value: 1.6e+1 Identity: 55.98% Query coverage: 87.19% Gaps: 6.52% Alignment: Query 25 UUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA-CUCUCCCACUUGGGGAGA-U 111 |||| | | | | ||||| | |||||||||| ||| |||||| |||||| | | | | | ||| || || | | | Sbjct 132 UUUAUCACAGUAUAUUGUUCAGGGACGGCGCGAACGCA--GUCCCGCUACCAAAAAUUACGUGUCCGAGAUAUUCCAAUUUGGAAUACU 218 Query 112 GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGAC---CCUUCAUGAUCGGCCAUAGACCCCGU--CCAG 195 | | | | | | | |||||||| | || | | || || ||| ||||| | | |||| || ||| Sbjct 219 CGCAGGGGUCAACCGUCCCGAUGUGCAAUGGGAAAGUCUCGUCCUGGAG--GAACCGCCUCGGUGAUCA-CGGUUGACCUCGACACCAA 304 Query 196 GUAAGU 201 |||||| Sbjct 305 GUAAGU 310 >> URS00003E9CF3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.7e+1 Identity: 61.38% Query coverage: 67.49% Gaps: 8.28% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCC---ACUUGGGGAGAU--GGUAAGCCAGCGCACCCACCAAGUGCAAUG--UGGGCCA 148 |||| |||||||||||||||| | | | ||| | ||||||| || | | | |||| || | ||||||| | | ||| Sbjct 25 CCCCACUACCACAAAUUAUGAAGCUGAGUUUCCUUGAAUUUGGGGAAAUCCCGGAGGUCAGCUCAUC---AGAGUGCAAAGGAUAAGCCU 111 Query 149 CUAGCCUAGGCCA-UGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | | ||| || | |||| ||||| || | ||||||||||| Sbjct 112 CAA-CCUGGGAAAAACCACCUUUCUGAUCAUGGUACCUCCUCUGCCAGGUAAGUA 165 >> URS000195D64F_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000043013.1) E-value: 1.7e+1 Identity: 55.56% Query coverage: 65.52% Gaps: 5.19% Alignment: Query 58 ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGG 145 | | | | || | |||||||||||| || | | ||| || ||||||| || | | | | ||| ||||||| Sbjct 297 AUGAAGUCUCUCUUUGCCACAAAUUAUGCAGUUGAGUUUCCUGCAGUUGGGGAAAUUACA-----GGGGUCAGCCCAUCUGCAAUGGAUA 381 Query 146 CCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || || || || ||||||| | | || | ||| | Sbjct 382 AGCCUCGCUGGGGAAAUCACCCUUCUGGUCAUGGAAUCGCCCCUG 426 >> URS000055D559_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.8e+1 Identity: 59.24% Query coverage: 74.88% Gaps: 5.10% Alignment: Query 51 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUG 136 | | ||| | |||| |||||||| |||||| || | | | ||| ||||||| || | || |||| || | | || Sbjct 8 AGUGUCAACACAGUUCCCCACUACCACA-AUUAUGCACUCAAGUUUUCCAGCUUUGGGGAAAUCUCAGGAGUCAGCACAUCUGAC--AUG 94 Query 137 CAAUGUGGGCCACUAG-CCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||||| || | ||| ||| | |||| ||||| | |||| |||| |||||| Sbjct 95 CAAUGGAUAAGCCUUGCCCUGGGCUAAACACCUUUGUGAUCAUGGCUUAUCCCCUGCCAGCUAAGUA 161 >> URS000239B89E_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC007076) E-value: 1e-24 Identity: 74.11% Query coverage: 97.04% Gaps: 3.05% Alignment: Query 7 AAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC 95 |||| || | || ||| ||||| | |||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct 2875 AAAAAUAAAAUUG----GUUAAAACUUGAA--UUGGGCAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGACGUAGGCUC 2957 Query 96 UCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAG 184 ||||||||| || || | |||| || | |||||||||| || | | | |||||||||| |||| |||||| |||| | Sbjct 2958 GACCACUUGGGCCGACCUUAGACGGGCGCCCCUCCUAAGUGCAAUGGAGGUCGCCAAUCUAGGCCAUGGGUCUUCUUGAUCGCCCAUUG 3046 Query 185 ACCCCGUCCAGGUAAGUAU 203 ||||||||||||||||||| Sbjct 3047 ACCCCGUCCAGGUAAGUAU 3065 >> URS0000048044_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.9e+1 Identity: 59.46% Query coverage: 70.94% Gaps: 12.16% Alignment: Query 58 ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAGUGCAAUGUG 143 | | |||| |||||||||||||| || | | |||||| ||||| | || | | ||| || || ||||||||| Sbjct 16 AUGUAGUCCCCUACUACCACAAAUUAUAUAGUUGAGUUUCCCACAUUUGGGAAAAUAACAGGGGUCAGUACAUCC--AGAGUGCAAUGA- 102 Query 144 GGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | ||||| | |||| ||||||| || ||| |||| ||||| Sbjct 103 ----AUAAGCCUUGCCCAUUGU-GAUCAUGAU-----AUCU-GCCCUGCCAGCUAAGU 149 >> URS0000454C86_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2e+1 Identity: 62.60% Query coverage: 62.56% Gaps: 6.87% Alignment: Query 67 CCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUG--UGGGCCACUAG 152 ||| ||| ||||||||||| || | | ||| || |||| || || | | | || | || ||||||||| | |||| || Sbjct 7 CCCACUAUCACAAAUUAUGCAGUGGAGUUUCCUGCAUUUGGAGAAAUCGCAGGGGUCAGCUCAUACGGAGUGCAAUGGAUAAGCCA-UAC 95 Query 153 CCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 ||| || | | ||||||||| || | || | || Sbjct 96 CCUGGGAAAACUGCAUUCAUGAUC----AUGGUACCUGCCC 132 >> URS000194C9C2_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000043013.1) E-value: 2.1e+1 Identity: 55.22% Query coverage: 65.02% Gaps: 5.22% Alignment: Query 58 ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGG 145 | | | | || | |||||||||||| || | | ||| || ||||||| || | | | | ||| ||||||| Sbjct 297 AUGAAGUCUCUCUUUGCCACAAAUUAUGCAGUUGAGUUUCCUGCAGUUGGGGAAAUUACA-----GGGGUCAGCCCAUCUGCAAUGGAUA 381 Query 146 CCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCC 189 || || || || ||||||| | | || | ||| Sbjct 382 AGCCUCGCUGGGGAAAUCACCCUUCUGGUCAUGGAAUCGCCCCU 425 >> URS00027F4989_9796 Equus caballus (horse) lncRNA (ENSECAG00000046291.1) E-value: 2.1e+1 Identity: 59.52% Query coverage: 60.10% Gaps: 7.14% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUG 136 | | |||| | || || ||| ||| ||||||| ||| | | |||||| ||||| | || | | | ||||| ||| | | Sbjct 8 AAGUGAGAACACAGUCCGCCACUAUCACCAAUUAUGCAGUCAAGUUUCCCACAGUUGGGUAAAUCGCAGAGGUCAGCGUUUCCAAC---UU 95 Query 137 CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCA 171 ||| | ||| ||| || | | || ||| Sbjct 96 GGAUGGAUGAAACUUGCCCUGGGAA--AACCAUCA 128 >> URS000005C81E_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.3e+1 Identity: 62.37% Query coverage: 44.83% Gaps: 2.15% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUG 143 ||| | | ||| || |||||||||||| || || | |||| | ||||| | | || | |||| ||| ||||||| | Sbjct 12 GAAUGUAGUCACCCACUGCCACAAAUUAUGCAGUUCAGUUUCCCUAAUUUGGGAAAACCAUAGGGGUCAGCACAUCCCACAUGCAAUGGG 101 Query 144 GGC 146 | Sbjct 102 UGA 104 >> URS0001957515_158456 Betta splendens (Siamese fighting fish) lncRNA (ENSBSLG00000001672.1) E-value: 2.5e+1 Identity: 72.60% Query coverage: 34.98% Gaps: 2.74% Alignment: Query 18 AGCAAAAUUUAAAUUUGAAGA-AUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACG 88 | | ||||| |||||| | ||| |||||| |||||||||| ||||| |||||| |||||||| | Sbjct 779 AUUAUAAUUUUCUUUUGAACACAUUAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAG 851 >> URS00027E8D5D_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034700.1) E-value: 2.6e+1 Identity: 61.07% Query coverage: 69.95% Gaps: 6.04% Alignment: Query 53 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAG 134 ||||| | || | || ||||||||||| || | | ||| || || |||| || | | |||| | ||| || Sbjct 22808 UGCGAAUGUAGUCCUCUACUUUCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCAG-GAG 22892 Query 135 UGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGA-CCCCGUCCA 194 |||||| || |||| |||||| | | |||||||| || || |||| |||| Sbjct 22893 UGCAAUAGAUGAGCCA-UAGCCUGAGAAAACCACCUUCAUGGUCAUGAUUAUUUCCCCUUCCA 22954 >> URS00027F3CB4_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034700.1) E-value: 2.6e+1 Identity: 59.86% Query coverage: 67.00% Gaps: 5.63% Alignment: Query 53 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAG 134 ||||| | || | || ||||||||||| || | | ||| || || |||| || | | |||| | ||| || Sbjct 25457 UGCGAAUGUAGUCCUCUACUUUCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCAG-GAG 25541 Query 135 UGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCC 188 |||||| || |||| |||||| | | |||||||| || || || Sbjct 25542 UGCAAUAGAUGAGCCA-UAGCCUGAGAAAACCACCUUCAUGGUCAUGAUUAUUUCC 25596 >> URS000026CF63_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.7e+1 Identity: 57.69% Query coverage: 74.38% Gaps: 4.49% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA----UGGUAAGCCAGCGCACCCACCAAGUGC 137 || | || || |||| || || |||||||| ||| | | ||| | | | ||| | | | |||| || ||| ||||| Sbjct 10 GCACAAAUGCAGUUCCCCACUGCCUCAAAUUAUACAGUCAAGUUUCCUGCAUUUGCAGAAAUCUCGGGGGUCAGCACAUCCA--GAGUGC 97 Query 138 AAUGUGGG-CCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || || ||| || | ||||||||||| ||||| |||| |||||| Sbjct 98 AACAGAUAAGUCUUACCCUGGGAAAACCACCUUCAUGAUCACAGUAUCACCCCUGCCAGUUAAGUA 163 >> URS000041D2D2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.8e+1 Identity: 57.14% Query coverage: 73.40% Gaps: 3.25% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGU 142 || | | | |||| ||||||||||||||| ||| | | ||| | || |||| || | | | ||| | | | || |||| Sbjct 12 GCCACCACAGUCCCCUACUACCACAAAUUAUGCAGUCAAAUUUCCUGAAUUAGGGAAAUCUCAGGGGUGAGCAUACCUCGAAUGAAAUGG 101 Query 143 GGG---CCACUA-GCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | || ||| || | |||| ||||| ||| ||||||||||| Sbjct 102 CUAAACCUUCUCUCCCUGGGAAAACCACCUUUGUGAUCAUGGUAUCUCCCUUGCCAGGUAAGUA 165 >> URS0000EB8F30_9606 Homo sapiens (human) HSALNT0165484 E-value: 3.1e+1 Identity: 62.39% Query coverage: 57.14% Gaps: 11.97% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU-A 151 |||||||| ||||||||||||||| ||| | ||| | ||| | || | || ||| | |||||||| | || | Sbjct 153 GUACCCCCACUACCACAAAUUAUGCAGUCAGGUUUCCUGC------AGAC-----GUCAACACAUCCAGC--GUGCAAUGGAUGAGCCUCA 230 Query 152 GCCUAGGCCAUGACCCUUCAUGAUCG 177 ||| || | ||||||||||| Sbjct 231 CCCUGGGAAAGCCACCUUCAUGAUCA 256 >> URS0000CCE86B_10116 Rattus norvegicus uncharacterized LOC102548318 E-value: 3.1e+1 Identity: 56.38% Query coverage: 69.95% Gaps: 6.04% Alignment: Query 35 AAGAAUUGGCAGGGGC----CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU-CCCACUUGGGGAGAUGGUAAGCC 119 | || ||||| | | | | ||| || | ||| | |||||||||| || || || | || ||||||| | | | Sbjct 322 UAUAACUGGCAAGCGGGGCAAGGACAAACACGGCCUCCCAUCAUCACAAAUUAUACAGUGCAUUCAGCACAUUUGGGGAAACCACAGG-- 409 Query 120 AGCGCACCCACCA--AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 || ||||| | || |||||| | | | | | || | ||||| |||| Sbjct 410 GGCUGACCCAGCCAGAGCGCAAUGAGAAACCAUUGUCCUGGGAAACUGCCUUCGUGAUG 468 >> URS0000E96AF6_9606 Homo sapiens (human) HSALNT0165482 E-value: 3.2e+1 Identity: 62.39% Query coverage: 57.14% Gaps: 11.97% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 |||||||| ||||||||||||||| ||| | ||| | ||| | || | || ||| | |||||||| | || Sbjct 1123 GUACCCCCACUACCACAAAUUAUGCAGUCAGGUUUCCUGC------AGAC-----GUCAACACAUCCAGC--GUGCAAUGGAUGAGCCU 1198 Query 151 -AGCCUAGGCCAUGACCCUUCAUGAUCG 177 | ||| || | ||||||||||| Sbjct 1199 CACCCUGGGAAAGCCACCUUCAUGAUCA 1226 >> URS000240CF80_3827 Cicer arietinum (chickpea) long non-coding RNA (CARI_LNC002567) E-value: 3.2e+1 Identity: 85.11% Query coverage: 23.15% Gaps: 0.00% Alignment: Query 157 GGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 ||||||| ||||| ||||| |||| |||||| ||||||||||||| Sbjct 1 GGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 47 >> URS00002C68B3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.3e+1 Identity: 62.61% Query coverage: 54.68% Gaps: 4.35% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG--GCCACUA 151 | || ||| ||||||||||| ||| | | |||| | ||||||| || | | | |||| | |||||| | || || Sbjct 14 CUCCACUAUCACAAAUUAUGCAGUCGAGUUUCCCGAAUUUGGGGAAAUUGCAGGGAUCAGCACAAGCAGAGUGCAGUAGAUAAACCUCU- 102 Query 152 GCCUAGGCCAUGACCCUUCAUGAUC 176 ||| || | ||||||||||| Sbjct 103 CCCUGGGAAAACCACCUUCAUGAUC 127 >> URS00027ECF5D_9796 Equus caballus (horse) lncRNA (ENSECAG00000046291.1) E-value: 3.3e+1 Identity: 60.48% Query coverage: 59.11% Gaps: 7.26% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUGCA 138 | | |||| | || || ||| ||| ||||||| ||| | | |||||| ||||| | || | | | ||||| ||| | | Sbjct 7 GUGAGAACACAGUCCGCCACUAUCACCAAUUAUGCAGUCAAGUUUCCCACAGUUGGGUAAAUCGCAGAGGUCAGCGUUUCCAAC---UUGG 94 Query 139 AUGUGGGCCACUAGCCUAGGCCAUGACCCUUCA 171 ||| | ||| ||| || | | || ||| Sbjct 95 AUGGAUGAAACUUGCCCUGGGAA--AACCAUCA 125 >> URS00027EF9F3_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034700.1) E-value: 3.4e+1 Identity: 60.58% Query coverage: 64.53% Gaps: 5.84% Alignment: Query 53 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAG 134 ||||| | || | || ||||||||||| || | | ||| || || |||| || | | |||| | ||| || Sbjct 22808 UGCGAAUGUAGUCCUCUACUUUCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCAG-GAG 22892 Query 135 UGCAAUG--UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 |||||| || |||| |||||| | | |||||||| || || Sbjct 22893 UGCAAUAGAUGAGCCA-UAGCCUGAGAAAACCACCUUCAUGGUCAUGAUUA 22942 >> URS0002343FD0_9606 Homo sapiens (human) HSALNT0358904 E-value: 3.5e+1 Identity: 62.39% Query coverage: 57.14% Gaps: 11.97% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU-A 151 |||||||| ||||||||||||||| ||| | ||| | ||| | || | || ||| | |||||||| | || | Sbjct 24 GUACCCCCACUACCACAAAUUAUGCAGUCAGGUUUCCUGC------AGAC-----GUCAACACAUCCAGC--GUGCAAUGGAUGAGCCUCA 101 Query 152 GCCUAGGCCAUGACCCUUCAUGAUCG 177 ||| || | ||||||||||| Sbjct 102 CCCUGGGAAAGCCACCUUCAUGAUCA 127 >> URS0000479DD4_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.6e+1 Identity: 56.46% Query coverage: 68.47% Gaps: 5.44% Alignment: Query 64 ACCCCCUC----UACCACAAAUUAUGAC-GUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGC 146 ||||| | | | ||||||| | || | | |||||| |||| || || | | |||| | ||||||||| | Sbjct 18 UCCCCCCCCAAGUGCUGCAAAUUAAUGCAUUCAAAUUUCCCACAUUUGGAGAAAUCUCAGGGGUCAGCACAUCCGGAGUGCAAUGGAAGA 107 Query 147 CACUAGCCUAGGCCAUGACCC-UUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||| ||| || | | | ||| |||| |||| |||||||||| Sbjct 108 GACUCGCCCUGGGAAAACCACUUUCUCGAUCAUGGUAUCUCCCCUGUCAGGUAAGUA 164 >> URS00023A7826_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006392) E-value: 4.4e+1 Identity: 62.50% Query coverage: 39.41% Gaps: 0.00% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||| | |||| | ||| |||||||||| || | || || |||| | | ||| || || | || ||| Sbjct 10169 GCGAAUGGAAACCCUCGCUAUCACAAAUUAUUACAUAGACCCUGCCACGUAGACAGACCUUAGGCAGGUAACCCUCCCAC 10248 >> URS00023EBBA6_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006392) E-value: 4.4e+1 Identity: 62.50% Query coverage: 39.41% Gaps: 0.00% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||| | |||| | ||| |||||||||| || | || || |||| | | ||| || || | || ||| Sbjct 10169 GCGAAUGGAAACCCUCGCUAUCACAAAUUAUUACAUAGACCCUGCCACGUAGACAGACCUUAGGCAGGUAACCCUCCCAC 10248 >> URS000240F549_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006391) E-value: 4.4e+1 Identity: 62.50% Query coverage: 39.41% Gaps: 0.00% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 ||||| | |||| | ||| |||||||||| || | || || |||| | | ||| || || | || ||| Sbjct 10704 GCGAAUGGAAACCCUCGCUAUCACAAAUUAUUACAUAGACCCUGCCACGUAGACAGACCUUAGGCAGGUAACCCUCCCAC 10783 >> URS00002E7775_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.6e+1 Identity: 56.49% Query coverage: 74.38% Gaps: 2.60% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAA 139 | | ||| || ||||| ||| | |||||||| ||| | ||| | ||||||| || | | |||| ||||||| Sbjct 8 GAGUGAAUGCAGUCCCCCAGUACUGCUAAUUAUGAUGUCAGGUUUCCUGAAUUUGGGGAAAUCACAGGGGUCAGCACAUUUGUAGUGCAA 97 Query 140 UGUGGG-CCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || | | ||| || | | ||||| || || || | || |||||||| Sbjct 98 UGGAUAAGCUUCAUCCUGGGAAAACA-CCUUCGUGUUCAUGGCAUCUCCUCAGCCUGGUAAGUA 160 >> URS0000533424_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.7e+1 Identity: 65.12% Query coverage: 40.39% Gaps: 6.98% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAG--CCAGCGCACCCACCAAGUGCAAUGUG 143 || || || |||||||||||| || || | | |||||| ||||||| | | | | |||| || | | |||||| | Sbjct 23 GUCCCUCCACUACCACAAAUUUUGCAGUUGAAUUUCCCACAUUUGGGGAAACUGAAGGGGUCAGCACAUCU--GGACAGCAAUGGG 106 >> URS000233BEAC_9606 Homo sapiens (human) HSALNT0310815 E-value: 4.8e+1 Identity: 58.56% Query coverage: 52.71% Gaps: 4.50% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAU 140 | | |||| | ||| || ||| | |||||| || | | | || ||||||| || | | | |||| | |||||||| Sbjct 193 GUGUGAACACAGUUUCCCACUGCCAAAGAUUAUGCAGUUGAGUUCUCCACAUUUGGGGAAAUUGCAGGGAUCAGCACAUCCAGAGUGCAAU 283 Query 141 GUGG--GCCACUAGCCUAGG 158 | ||| | | ||| || Sbjct 284 GAAUAAGCCUC-ACCCUGGG 302 >> URS00027F5054_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015032189.1) E-value: 4.9e+1 Identity: 60.47% Query coverage: 41.38% Gaps: 2.33% Alignment: Query 61 CGUACCCCCUCUACCACAAAUUAUGACGUCCAC--UCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG 144 | | || ||||||||||||||| || | |||| || ||||||| | | | | ||||| | |||| || | Sbjct 265 CAGUCUCCUACUACCACAAAUUAUGCAGUGGAGCAUCUCACAUUUGGGGAACUUGCUGGGCUCCGCACGUCCAGAGUGUAAAGGAU 350 >> URS0000E0EDEF_7266 Drosophila guanche non-coding RNA E-value: 5e+1 Identity: 55.93% Query coverage: 81.28% Gaps: 11.30% Alignment: Query 38 AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA--GAUGGU--AAGCCAGCGC 124 | | ||| | |||||||||| ||| |||||| |||||| | | | ||| | ||| || | | | || | | Sbjct 463 UUUAUGUCGGGACGGCGCGAACGCCAUUCCCGGCUACCAAAAAUUACACGCACGAGUUAUUCACAUUAGGAAUAAUCGCAGAGGUCAACUC 553 Query 125 ACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCC------AUGACCCUUCAUGAUCGGCCAUAGACCCC--GUCCAGGUAAGUA 202 | | | |||||||||| ||| ||||| | | ||||| ||||| | ||| | ||||||||||| Sbjct 554 AGC--CGAAGUGCAAUGG---CCA--AGCCUCACUCCGGAGGAACCGCCUUCGUGAUCACG-GUUCACCUCUACGCCAGGUAAGUA 631 >> URS0001A1DB6D_9606 Homo sapiens (human) X active specific transcript E-value: 5.2e+1 Identity: 54.36% Query coverage: 67.49% Gaps: 12.75% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUG---GUAAGCCAGCGCACCCACCAA 133 | | |||| | | || | |||| |||||||| || | | |||||| |||| || || | | |||| || | Sbjct 13788 GAGUGAACACAGUUCACCACCACCAUAAAUUAUGCAAUCAAGUUUCCCACAUUUGGUGAAAUCUCAGGGGGUCAGCACAUCU----- 13869 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUG-------ACCCUUCAUGAUCGGCCAUAGACCC 188 | |||| | ||||| ||| || ||||||||||| |||| Sbjct 13870 --GGAAUGGAAUAGAUGAGCCUUGGCGCUGGGAGAACCACCUUCAUGAUCAUGGCACUACCC 13929 >> URS00025C80F9_9606 Homo sapiens (human) non-coding RNA E-value: 5.2e+1 Identity: 54.36% Query coverage: 67.49% Gaps: 12.75% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUG---GUAAGCCAGCGCACCCACCAA 133 | | |||| | | || | |||| |||||||| || | | |||||| |||| || || | | |||| || | Sbjct 13780 GAGUGAACACAGUUCACCACCACCAUAAAUUAUGCAAUCAAGUUUCCCACAUUUGGUGAAAUCUCAGGGGGUCAGCACAUCU----- 13861 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUG-------ACCCUUCAUGAUCGGCCAUAGACCC 188 | |||| | ||||| ||| || ||||||||||| |||| Sbjct 13862 --GGAAUGGAAUAGAUGAGCCUUGGCGCUGGGAGAACCACCUUCAUGAUCAUGGCACUACCC 13921 >> URS0002187333_50452 Arabis alpina U1 spliceosomal RNA E-value: 5.4e+1 Identity: 68.00% Query coverage: 36.95% Gaps: 1.33% Alignment: Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | | | |||||||| || |||||||||||| | || || | || ||| |||| | || |||| |||| Sbjct 53 CUCAAUGUGCAAUGAAAAUCAUUAGCCUAGGCCACAAGCCAUCUUAGUCACUCAUUGACC-CAUCUAGGUGAGUA 126 >> URS00002D7FF0_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.8e+1 Identity: 58.33% Query coverage: 68.97% Gaps: 2.78% Alignment: Query 63 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 || | | ||| |||||| | || | | |||||| ||||||| || | | | | | | | ||| |||| | || Sbjct 16 CACUUCUGUUGCCAGAAAUUAAGCAGUAGAAUGUCCCACAUUUGGGGAAAUCUCAGGGAUCUGUAUACCCAAGGUGGAAUGGAUGAGCCU 105 Query 151 AGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCG-UCCAGGUAAGUA 202 ||| || ||| | |||| || ||||||| ||| | ||| ||||| Sbjct 106 CCCCUGGGACCAAGUACCUUAAUCCAUGGCCAUAUCUCCCUCACUAGGGAAGUA 159 >> URS000058B2A7_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.3e+1 Identity: 59.86% Query coverage: 67.98% Gaps: 9.15% Alignment: Query 65 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG--GGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUG--UGGGCCACU 150 |||| |||||||||||||| || | | |||||| | |||| || || || | ||| | | ||||| | |||| Sbjct 23 CCCCUCAUACCACAAAUUAUGCAGUUGAGUUUCCCACAUUGUGGGAAAUUGUCAGG------AUCCA--GAAUCCAAUGACUAGGCCU-C 103 Query 151 AGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | ||||| | | || ||||| |||| ||||||||||| Sbjct 104 ACUCUAGGAAAGCUGCUUUUGUGAUCAUAUUAUCUCCCCUGCCAGGUAAGUA 155 >> URS0002579EFC_9606 Homo sapiens (human) ncRNA E-value: 6.8e+1 Identity: 55.40% Query coverage: 62.56% Gaps: 13.67% Alignment: Query 51 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUG---GUAAGCCAGCGCACCCACCA 132 | | |||| | | || | |||| |||||||| || | | |||||| |||| || || | | |||| || | Sbjct 13759 AGAGUGAACACAGUUCACCACCACCAUAAAUUAUGCAAUCAAGUUUCCCACAUUUGGUGAAAUCUCAGGGGGUCAGCACAUCU---- 13841 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGGCCAUG-------ACCCUUCAUGAUCG 177 | |||| | ||||| ||| || ||||||||||| Sbjct 13842 ---GGAAUGGAAUAGAUGAGCCUUGGCGCUGGGAGAACCACCUUCAUGAUCA 13890 >> URS00004E980D_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.9e+1 Identity: 54.97% Query coverage: 72.91% Gaps: 1.99% Alignment: Query 55 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGU 142 || | || | ||| || |||||||| ||| | | || | | ||| ||| || | | | |||| | ||| ||||| Sbjct 13 UGAGCAUAGUCCUCUACUAACAGAAAUUAUGCAGUCAAGUUUCUCAAAUUUGUGGAAAUCGCAGGGGUUAGCACAACCUGAGUACAAUGG 102 Query 143 GGGCCACUAGCCUAGGCCAUGAC-CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | || | | || | | | ||||| || | |||| |||| ||||| Sbjct 103 AUGAGCCUGGUCCUGGAAAAGCCACCUUCCCCAUUACGGUGUGUCCCCUGGCAGGCAAGUA 163 >> URS0000CBBE53_45464 Teladorsagia circumcincta U1 spliceosomal RNA E-value: 7.1e+1 Identity: 58.18% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC-CACUUGG-GGA------GAUGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | ||| || || ||| | | || | ||| |||| | Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCCGUUGGCUAACCUCACCUCGAGGUUGCCACGCGGGUCAGCCUUC-----A 86 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUG-ACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||||| | || || || | ||||| |||||| |||| |||||||||| Sbjct 87 CUAAAGUGCAAUGUGAGGGCCUCACCACGGGGGUCCCGCCUUCCUGAUCGCGAGAUCCCCCCAGCCAGGUAAGUU 161 >> URS00023A2EB1_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC003779) E-value: 7.1e+1 Identity: 73.77% Query coverage: 30.05% Gaps: 1.64% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 |||| | || ||| | | |||| |||| || ||||||||| |||| | || ||||| || Sbjct 63100 GGGGGCACGUGAAUGAAUGCCCCUUCUAUCAGAAAUUAUGAAAUCCAUU-UCACACUUAGG 63159 >> URS00001BD0AE_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.6e+1 Identity: 67.65% Query coverage: 32.51% Gaps: 2.94% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAG 117 || | ||||| | ||| | ||||||||||| ||| | ||| ||||| ||||||| | | | Sbjct 10 GCACAAACGCUUUCCCUCACUACCACAAAUAAUGCAGAGGACUUUCCCAUAUCUGGGGAGGUCACAGG 77 >> URS000043C565_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.2e+1 Identity: 66.67% Query coverage: 38.92% Gaps: 2.47% Alignment: Query 63 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUG 141 ||||| |||||| ||||||| ||| ||| ||||| ||||||| || || | |||| ||||||||| Sbjct 20 CCCCCCCACUACCAAAAAUUAUAUAGUCAACUUUCCCAUGUUUGGGGAAAUCACCAGGGACAGCACAUUGGGAGUGCAAUG 100 >> URS000081EEA6_29172 Dictyocaulus viviparus (bovine lungworm) U1 spliceosomal RNA E-value: 8.4e+1 Identity: 59.39% Query coverage: 76.85% Gaps: 10.30% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGG-----AGAUGGUAAGCCAGCGCACCCA 129 ||||||||||||||| |||| | || ||||| | || || || | ||| | | | ||| | |||| | | Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUUACUUCAACUCGAAGUAGCCACAUG---GGUCAGCCCUAC-- 86 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAU-GACCCUUCAUGAUCGGCCAUAGA-CCCCGUCCAGGUAAGUA 202 |||||||||||| | || || || | ||||| ||||| | || |||| |||||||||| Sbjct 87 GAAAGUGCAAUGUGAGGGCCUCACCAUGGGGGUCCCGCCUUCUUGAUCAC-GAGAGCCCCCCAGCCAGGUAAGUU 160 >> URS00005A9EA9_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.4e+1 Identity: 55.92% Query coverage: 74.38% Gaps: 11.84% Alignment: Query 53 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGU 142 | |||| | ||||| ||||||||||| ||| | | || | |||||| ||||| | ||||||| Sbjct 11 CUUGAACACAGUCCCCCACUACCACAAAUGAUGCAGAGAAAUCACA--G-------------UGGCCAGCACACCC--UGAAUGCAAUGG 83 Query 143 GGGCCACUAGCCUAG-GCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | || ||| | | | ||||||||||| |||| |||||||||||| Sbjct 84 AGAAGCCUUGCCCUGAGAAAACCACCUUCAUGAUCAUGUUAUCUCCCCUGCCAGGUAAGUAU 145 >> URS00023FBEC9_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC038046) E-value: 9.4e+1 Identity: 67.95% Query coverage: 38.42% Gaps: 1.28% Alignment: Query 126 CCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | |||| ||| || || ||| |||| | ||| | |||| ||||| |||| || ||||| ||| |||||| Sbjct 1039 CUUACCAUGUGAGAUAGAGGUCACCAGCCCAA-CCACAAGCCUUUCUGAUCAUCCAUUGAAACCGUCAAGGCAAGUAU 1115 >> URS00000F8939_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.5e+1 Identity: 58.72% Query coverage: 51.72% Gaps: 10.09% Alignment: Query 51 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAGUG 136 | | |||| | ||||| || | |||||||||| ||| | | ||| | | || || || || | |||| |||||| | Sbjct 9 AGUGUGAACACAGUCCCCCACUCCUACAAAUUAUGCAGUCGAGUUUCCUGAAUUCGGAGAAAUCAUAGGUGUCAGCACACCCAG----AG 94 Query 137 CAAUGUGGGCCACUAGCCU 155 | | || ||||| Sbjct 95 GAU---AGUACAUAAGCCU 110 >> URS00004AD4E1_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.8e+1 Identity: 58.04% Query coverage: 69.46% Gaps: 8.39% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG-GGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUG-GGCCAC 149 || | |||||||||||||||||| || | | ||||| | ||| | |||| || || |||||||| Sbjct 18 GUCUCUCCUCUACCACAAAUUAUGGAGUUGAGUUUCCCAUAUUAACCAGA-----UGUCAGCACAUCCU-GGAGUGCAAUAGUUAAGUCU 101 Query 150 UAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | |||| | | ||| ||||||| ||| | | |||||||||| Sbjct 102 UGGCCUGCGAAAAACACCUACAUGAUC----AUAUCUCUUCUGCAGGUAAGUA 150 >> URS00008265A1_29172 Dictyocaulus viviparus (bovine lungworm) U1 spliceosomal RNA E-value: 9.9e+1 Identity: 58.79% Query coverage: 76.85% Gaps: 10.30% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGG-----AGAUGGUAAGCCAGCGCACCCA 129 ||||||||||||||| |||| | || ||||| | || || || | ||| | | | ||| | |||| | | Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUUACUUCAACUCGAAGUAGCCACAUG---GGUCAGCCCUAC-- 86 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGA-CCCCGUCCAGGUAAGUA 202 ||||||||||| | || || || ||||| |||||| | || |||| |||||||||| Sbjct 87 GAAAGUGCAAUGUAAGGGCCUCACCAUGGGGGUCCCGCCUUCUUGAUCGC-GAGAGCCCCCCAGCCAGGUAAGUU 160 >> URS0000026CD2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1e+2 Identity: 59.60% Query coverage: 47.78% Gaps: 4.04% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUG 143 || || | ||| | ||||||||||| ||| | || |||| | | |||||| || | || ||||||||||| Sbjct 10 GCUAAUACAGUCCCUCACUACCACAAAUCAUGGAAGUUUCCUAUGUACGUGGGAAUCUCAGGGGCCAGCACAUC--CCGAGUGCAAUGUG 97 Query 144 GG--CCACU 150 | || || Sbjct 98 UGAGCCUCU 106 >> URS000025A2D5_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1e+2 Identity: 56.38% Query coverage: 71.92% Gaps: 5.37% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUGCAAUGUG 143 || || | ||| ||||||||||||||| | |||| | |||| || | | | | |||| || | ||||||||| Sbjct 14 AAAUGCAGUCUCCCACUACCACAAAUUAUGC---AAAUUCUCGAAUUUGGAGAAACUGAAGAGGUCAGCACAUC--UGGAGUGCAAUGGA 98 Query 144 GGCCACUAGCCUA-GGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 ||| || || | | ||| ||||| | || ||||||| || Sbjct 99 UAAGACUCACCCUGGGAAAACCACUUUCUUGAUCCUAGUAUCUCUCCUGCCAGGUAGGU 157 >> URS00004B192A_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e+2 Identity: 56.69% Query coverage: 74.38% Gaps: 5.10% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA-----UGGUAAGCCAGCGCACCCACCAAGUG 136 || | || || ||| || || |||||||| ||| | | ||| | | | ||| | | | |||| || ||| |||| Sbjct 10 GCACAAAUGCAGUUCCCUACUGCCUCAAAUUAUACAGUCAAGUUUCCUGCAUUUGCAGAAAAUCUCGGGGGUCAGCACAUCCA--GAGUG 97 Query 137 CAAUGUGGG-CCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||| || ||| || | ||||||||||| ||||| |||| |||||| Sbjct 98 CAACAGAUAAGUCUUACCCUGGGAAAACCACCUUCAUGAUCACAGUAUCACCCCUGCCAGUUAAGUA 164 >> URS00004E9AB5_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e+2 Identity: 63.79% Query coverage: 28.57% Gaps: 6.90% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCC 119 || | ||| ||||||||||||||| ||| |||||| | ||||| | Sbjct 19 GUCCUCCCACUACCACAAAUUAUGUACCUGACUUUCCCACAUUUGGAGAAA----UAC 72 >> URS0000828BD4_29172 Dictyocaulus viviparus (bovine lungworm) U1 spliceosomal RNA E-value: 1.1e+2 Identity: 57.32% Query coverage: 76.85% Gaps: 9.15% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGG-----AGAUGGUAAGCCAGCGCACCCA 129 ||||||||||||||| |||| | || ||||| | || || || | ||| | | | ||| | |||| | | Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUUACUUCAACUCGAAGUAGCCACAUG---GGUCAGCCCUAC-- 86 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||||||||||| | || || || ||||| |||||| |||| |||||||||| Sbjct 87 GAAAGUGCAAUGUAAGGGCCUCACCAUGGGGGUCCCGCCUUCUUGAUCGCGAGAUCCCCCCAGCCAGGUAAGUU 160 >> URS0000EF2B78_9823 Sus scrofa (pig) lncRNA (ENSSSCG00070010801.1) E-value: 1.1e+2 Identity: 58.77% Query coverage: 54.68% Gaps: 2.63% Alignment: Query 92 ACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGC 179 | | ||| || ||||||| || | | | |||| | ||||||||| || ||| | || | ||||| ||||| Sbjct 108 AGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGUGCAAUGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUG 198 Query 180 CAUAGACCCCGUCCAGGUAAGUA 202 |||| ||||||||||| Sbjct 199 GUAUCUCCCCUGCCAGGUAAGUA 221 >> URS0001A1E6DA_7957 Carassius auratus (goldfish) lncRNA (ENSCARG00000024231.1) E-value: 1.2e+2 Identity: 63.16% Query coverage: 37.44% Gaps: 0.00% Alignment: Query 36 AGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU 111 ||||| |||| |||| ||| | | |||| | | | ||||||| ||| | |||| |||| || || Sbjct 2629 AGAAUCCCAAGGGAGAGCGCUAACACAUUUCCCCAAUUCUAUUAAUUAUGCAGUCGAGACUCCUACUUUUGGGGAA 2704 >> URS00027EFA1E_9796 Equus caballus (horse) lncRNA (ENSECAG00000056859.1) E-value: 1.2e+2 Identity: 56.16% Query coverage: 67.00% Gaps: 11.64% Alignment: Query 41 UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUA----AGCCAGCGCACC 127 || | ||| || |||| | | |||||| | ||||||| ||| ||| | ||| | || | || | |||| || | Sbjct 139 UGCCGGGGAGAGCAGGAACACAGAUCCCCUCCAGCACAAAUCAUGCAGUCAAGAUUCCUGCAUGCAGCCAUACUGCAGUGAUCAGCACAUC 229 Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCU------AGGCCAUGACCCUUCAUGAUC 176 | ||||||||| || || || || | |||||| ||||| Sbjct 230 C--AGAGUGCAAUGC-----ACAAGUCUCACGCCGGGAAAAUCCCCUUCUUGAUC 277 >> URS00019C0219_506608 Cinara cedri non-coding RNA E-value: 1.3e+2 Identity: 59.88% Query coverage: 78.82% Gaps: 5.39% Alignment: Query 43 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC--UCUCCCACUUGGGGAGA-UGGUA--AGCCAGCGCAC 126 ||||| | |||||||||| | || ||| || ||||||| |||||| | ||| || |||| | | | | | || | || Sbjct 106 UCAGGGACGGCGCGAACGCAGUC-CCAGCUAACAAAAAUUAU-ACGUCCGAGAUAUCCACAUUAGGGAUACUCGCAGGGGUCAACCCAA 192 Query 127 CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUG-ACCCUUCAUGAUCG-GCCAUAGACCCCGUCCAGGUAAGUA 202 | | |||||||| || |||| || ||| |||||| | || || ||||||||||| Sbjct 193 UCUGUAUGUGCAAUGAUCAGAUCUCGCCUUGGAGGAACCGCCUAAAUGAUCACGGUUUACCUCCACGCCAGGUAAGUA 270 >> URS00023F6F2A_3708 Brassica napus (rape) long non-coding RNA (BNAP_LNC018653) E-value: 1.4e-4 Identity: 67.83% Query coverage: 54.68% Gaps: 4.35% Alignment: Query 92 ACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC----CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 |||| ||||||||| ||| ||||| | |||| | | |||||||| | ||||||| |||| || ||||| || Sbjct 54259 GCUCUUCCACUUGGGAAGACCUUAAGCUAAA-CACCCUUUCUUAAUGUGCAAUGGAAGUCACUAGCUUAGGGCACUCAUCUUCAAGA 54344 Query 175 UCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || | ||||||||||| ||||||| Sbjct 54345 UCAAGAGUCGACCCCGUCCAUGUAAGUA 54372 >> URS0002335FBF_9606 Homo sapiens (human) HSALNT0390841 E-value: 1.4e+2 Identity: 68.75% Query coverage: 31.03% Gaps: 1.56% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAGAUGGU 114 |||| || || ||||| ||||||||| ||||| | | | | || || | ||||| || | Sbjct 842 GCGCAAAAGCAGUCCCCCACUACCACAAGUUAUGCAGCCGAGUUUUCUCAUUCGGGGAAAUCGC 905 >> URS00027EAA88_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034996.1) E-value: 2.3e-8 Identity: 65.84% Query coverage: 75.86% Gaps: 4.35% Alignment: Query 23 AAUUUAAAUUUGAA---GAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUG 104 | | | | |||| | ||| |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||| Sbjct 2143 AGUCUUAUUUUGUAACAAGAUUACCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUG 2230 Query 105 GGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCC-AUGACCCUUCAUGAUC 176 |||| || | | | |||| | |||||||||||| | | || ||| || | ||| | ||||| Sbjct 2231 GGGAAAUCGCAGGGGUCAGCACACCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUGCUUGAUC 2303 >> URS0000476A03_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.6e+2 Identity: 63.74% Query coverage: 44.33% Gaps: 3.30% Alignment: Query 53 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUG 141 | | ||| | ||||| ||| ||||| |||| || | | ||| | || ||| || | | |||| | | |||||||||||| Sbjct 11 CACAAACACAGUCCCCCACUAUCACAAUUUAUAUAGUGGAGUUUCCUGCACUGAGGAAAUCAUUGGUCAGCAUAUC--CCAAGUGCAAUG 98 Query 142 U 142 Sbjct 99 G 99 >> URS00019BB59C_506608 Cinara cedri non-coding RNA E-value: 1.7e+2 Identity: 63.77% Query coverage: 33.99% Gaps: 1.45% Alignment: Query 25 UUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC 93 || | | ||| |||| |||| | |||||||||| ||| |||||| |||||| | | | Sbjct 92 UUGGACUCGGAAAAAUUUUUAGGGACGGCGCGAACGCAGU-CCCAGCUACCAAAAAUUACGUGCCCGAG 159 >> URS000012ED1C_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.9e+2 Identity: 59.79% Query coverage: 46.80% Gaps: 2.06% Alignment: Query 60 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCC 147 || ||||| || |||||||| | || ||| | | | | ||||| || || | || |||| |||||||||| | Sbjct 18 GCAGUCCCCCACUGCCACAAAUCACACAGUUGACUUUUCUGAAUUAGGGGAAAUCCUACGGAUUGACAAACACCGAGUGCAAUGUAUGAG 107 Query 148 ACUAGCC 154 || || Sbjct 108 CCUUACC 114 >> URS00007E58BD_29170 Ancylostoma caninum (dog hookworm) U1 spliceosomal RNA E-value: 1.9e+2 Identity: 58.43% Query coverage: 76.85% Gaps: 10.84% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAG------AUGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | || || | | ||| | || ||| |||| |||| Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUAACCUCAACUCGAGGCUGCCACACAGGUCAGCCCGCGCU--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGA-CCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || ||||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCGCCUUCUUGAUCGC-GAGAGCCCCCCAGCCAGGUAAGUU 161 >> URS00007E58BD_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 1.9e+2 Identity: 58.43% Query coverage: 76.85% Gaps: 10.84% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAG------AUGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | || || | | ||| | || ||| |||| |||| Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUAACCUCAACUCGAGGCUGCCACACAGGUCAGCCCGCGCU--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGA-CCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || ||||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCGCCUUCUUGAUCGC-GAGAGCCCCCCAGCCAGGUAAGUU 161 >> URS00007E58BD_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 1.9e+2 Identity: 58.43% Query coverage: 76.85% Gaps: 10.84% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAG------AUGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | || || | | ||| | || ||| |||| |||| Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUAACCUCAACUCGAGGCUGCCACACAGGUCAGCCCGCGCU--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGA-CCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || ||||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCGCCUUCUUGAUCGC-GAGAGCCCCCCAGCCAGGUAAGUU 161 >> URS0000564596_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2e+2 Identity: 60.69% Query coverage: 68.47% Gaps: 7.59% Alignment: Query 63 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG---GUAAGCCAGCGCACCCACCAAGUGCAA--UGUGGGCC 147 | || |||||||||||||| ||| | | | |||| | | ||| || |||| |||||| ||||||| || || Sbjct 21 GCUCGCCACUACCACAAAUUAUACAGUCAAGUUUUCCACAUUUGAAGAACCACAGGAGACAGCACACCCA--GAGUGCAACAGAUGAGCU 108 Query 148 ACUAGCCUAGGCCAUGACCCUUCAUGAU-CGGCCAUAGACCCCGUCCAGGUAAGU 201 | || || || ||||| || || | ||| ||| | ||||||||| Sbjct 109 UCAUCCCCAGAAAAUCACCCUC-AUAAUUAUGACAU--CUCCCCUGCAGGUAAGU 160 >> URS00023BE71F_3880 Medicago truncatula (barrel medic) long non-coding RNA (MTRU_LNC002649) E-value: 2e+2 Identity: 64.29% Query coverage: 34.48% Gaps: 10.00% Alignment: Query 115 AAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAG 184 | || || | || ||||||||||| || |||||| | || ||||| ||||| ||||| Sbjct 6370 AGGCAGGCACCCCUCAUAAGUGCAAUGUAGG-------UCUAGGCUACGAGCCUUCUUGAUCACUCAUAG 6432 >> URS0002394347_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC000572) E-value: 7.4e-20 Identity: 74.73% Query coverage: 90.15% Gaps: 2.15% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU 103 || | |||| | | | ||||| || ||||||||||||||||| |||| || ||||||||||||| || ||| |||||| Sbjct 42631 GCUAUGUUUAGACU-AAGGAAUUGGGUAGGGGCCGCGCGAACGCAAGACCCCACUGCCACAAAUUAUGAAGUAGGCUCGGCCACUU 42715 Query 104 GGGGAGAUGGUAAGCCAGCGCACCCA-CCAAGUGCAAUGUGGGCCACUAG-CCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACC 187 || || | || ||| | || | |||||||||| || |||||| || ||||||||| ||||| |||| | |||| |||| Sbjct 42716 GGACUGACCUUGGGCUAGCACCCCUCCCGAAGUGCAAUGGAGGUCACUAGGCCCAGGCCAUGAGCCUUCUUGAUAGCCCAUUGACC 42801 Query 188 CCGUCCAGGUAAGU 201 |||||||||||||| Sbjct 42802 CCGUCCAGGUAAGU 42815 >> URS00023CE3D2_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC000577) E-value: 7.4e-20 Identity: 74.73% Query coverage: 90.15% Gaps: 2.15% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU 103 || | |||| | | | ||||| || ||||||||||||||||| |||| || ||||||||||||| || ||| |||||| Sbjct 38931 GCUAUGUUUAGACU-AAGGAAUUGGGUAGGGGCCGCGCGAACGCAAGACCCCACUGCCACAAAUUAUGAAGUAGGCUCGGCCACUU 39015 Query 104 GGGGAGAUGGUAAGCCAGCGCACCCA-CCAAGUGCAAUGUGGGCCACUAG-CCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACC 187 || || | || ||| | || | |||||||||| || |||||| || ||||||||| ||||| |||| | |||| |||| Sbjct 39016 GGACUGACCUUGGGCUAGCACCCCUCCCGAAGUGCAAUGGAGGUCACUAGGCCCAGGCCAUGAGCCUUCUUGAUAGCCCAUUGACC 39101 Query 188 CCGUCCAGGUAAGU 201 |||||||||||||| Sbjct 39102 CCGUCCAGGUAAGU 39115 >> URS000237E422_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006400) E-value: 2.6e-1 Identity: 64.22% Query coverage: 53.69% Gaps: 0.92% Alignment: Query 55 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAU 140 |||| | |||| | ||| |||||||||| || | || || |||||| | ||| || || | | || |||||| || | Sbjct 11002 CGAAUGGAAACCCUCGCUAUCACAAAUUAUUACAUAGACCCUGCCACUUAGACAGACCUUAGGCAGGUACCCCUCCCAAGU-CAGU 11086 Query 141 GUGGGCCACUAGCCUAGGCCAUG 163 | || |||| || | | | | Sbjct 11087 GGAGGUGGCUAGGCUGGUCAACG 11109 >> URS00023E79E0_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC008999) E-value: 2.2e-39 Identity: 87.18% Query coverage: 95.57% Gaps: 0.51% Alignment: Query 10 AUCCAAGGAGCAAAAUU-UAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC 95 | | | ||| ||||| | ||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22197 AGCUAGGGAUCAAAAGUUUAAUUCUUUAAAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC 22283 Query 96 UCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAU 182 |||| |||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||| | ||||||||| | || | Sbjct 22284 UCCCUCUUGGGGAGAUGGUAAGCUAGCGCACCCGCCAAGUGCAAUGCGGGCCACUGACCUAGGCCACGGGCCUUCAUGACCAACCGU 22370 Query 183 AGACCCCGUCCAGGUAAGUAU 203 |||||||||||||||||||| Sbjct 22371 CGACCCCGUCCAGGUAAGUAU 22391 >> URS0002407270_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC008999) E-value: 2.2e-39 Identity: 87.18% Query coverage: 95.57% Gaps: 0.51% Alignment: Query 10 AUCCAAGGAGCAAAAUU-UAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC 95 | | | ||| ||||| | ||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 38567 AGCUAGGGAUCAAAAGUUUAAUUCUUUAAAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC 38653 Query 96 UCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAU 182 |||| |||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||| | ||||||||| | || | Sbjct 38654 UCCCUCUUGGGGAGAUGGUAAGCUAGCGCACCCGCCAAGUGCAAUGCGGGCCACUGACCUAGGCCACGGGCCUUCAUGACCAACCGU 38740 Query 183 AGACCCCGUCCAGGUAAGUAU 203 |||||||||||||||||||| Sbjct 38741 CGACCCCGUCCAGGUAAGUAU 38761 >> URS000240CBD1_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC008999) E-value: 2.2e-39 Identity: 87.18% Query coverage: 95.57% Gaps: 0.51% Alignment: Query 10 AUCCAAGGAGCAAAAUU-UAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC 95 | | | ||| ||||| | ||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 38666 AGCUAGGGAUCAAAAGUUUAAUUCUUUAAAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC 38752 Query 96 UCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAU 182 |||| |||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||| | ||||||||| | || | Sbjct 38753 UCCCUCUUGGGGAGAUGGUAAGCUAGCGCACCCGCCAAGUGCAAUGCGGGCCACUGACCUAGGCCACGGGCCUUCAUGACCAACCGU 38839 Query 183 AGACCCCGUCCAGGUAAGUAU 203 |||||||||||||||||||| Sbjct 38840 CGACCCCGUCCAGGUAAGUAU 38860 >> URS0000059417_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.3e+2 Identity: 60.99% Query coverage: 67.49% Gaps: 7.09% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAG 152 |||| |||||||||| | || | | | | || ||| || |||| || | | |||| || | ||||||||| || | Sbjct 9 CCCCACUACCACAAACUGUGUAGGCAAGUUUCUCACAUUUGGGAAAUCACAGGGGUCAGCACAU---CGGAGUGCAAUGGA-UAAGCUUG 94 Query 153 CCUAGGCCAUGAC-CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || || || | |||| ||||| | |||| |||| |||||| Sbjct 95 UCUUGGAAAUACCACCUUUGUGAUCAU--GGUGUCCCCUGCCAGAUAAGUA 143 >> URS0000282329_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.3e+2 Identity: 57.35% Query coverage: 66.01% Gaps: 1.47% Alignment: Query 69 CUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUA 156 ||||||||||||||| ||| | | ||||| || || | || ||| || | ||| ||||| | | || | Sbjct 18 UACUACCACAAAUUAUGUAGUCAAGUUUCCCAAAUUUAGGAAAAUCACAAGAGUCAAUACAUGCUGAGUACAAUGGAGACACCUCAUCCU 107 Query 157 GGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||| | | | ||| | ||| |||| ||| ||||||| Sbjct 108 GGCAAAGCCACUUUUGUGACCAUGAUAUUCCCCUGCCAUGUAAGUA 153 >> URS00005F8127_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.3e+2 Identity: 63.75% Query coverage: 38.42% Gaps: 2.50% Alignment: Query 63 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAU 140 ||| || || ||| |||||||| ||| ||| |||||| || |||| | || | |||| ||| |||| Sbjct 19 GACCUCCACUGCCAUAAAUUAUGCAGUCGACUUUCCCACAUUUUGGGACACCAUAGGGUUCAGCACAACUGUAGUACAAU 98 >> URS000082708E_29172 Dictyocaulus viviparus (bovine lungworm) U1 spliceosomal RNA E-value: 2.4e+2 Identity: 58.79% Query coverage: 76.85% Gaps: 10.30% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGG-----AGAUGGUAAGCCAGCGCACCCA 129 ||||||||||||||| |||| | || ||||| | || || || | ||| | | | ||| | |||| | | Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUUACUUCAACUCGAAGUAGCCACAUG---GGUCAGCCCUAC-- 86 Query 130 CCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGA-CCCCGUCCAGGUAAGUA 202 ||||||||||| | || || || ||||| |||| | | | || |||| |||||||||| Sbjct 87 GAAAGUGCAAUGUAAGGGCCUCACCAUGGGGGUCCCGCCUUCUUGAUAG-CGAGAGCCCCCCAGCCAGGUAAGUU 160 >> URS0000074087_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.5e+2 Identity: 61.68% Query coverage: 50.74% Gaps: 5.61% Alignment: Query 65 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUA-AGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU- 150 |||| || |||||||||||| | | | ||| || ||||||| || | || | |||||| ||||||||| | Sbjct 20 UCCCCGCUGCCACAAAUUAUGCAGCCAAGCUUCCUGCAUUUGGGGAACUGCAGGGGUCAACACACCCA--GAGUGCAAUGGAUAAGGUUA 107 Query 151 AGCCUAGGCCAUGACCC 167 | |||||| | ||| Sbjct 108 ACCCUAGGAAACCACCU 124 >> URS0000008D07_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.6e+2 Identity: 58.33% Query coverage: 68.47% Gaps: 4.86% Alignment: Query 64 ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAGUGCAAUGUG-GGCCA 148 |||| ||||| |||||||| ||| | | | | || ||| || || | | |||| || || ||||||| Sbjct 13 UUCCCCACUACCUCAAAUUAUACAGUCAAGUUUUCUGCAUUUGCAGAAAUCUCAGGUGUCAGCACAUCC--AGAGUGCAACAGACAAGUC 100 Query 149 CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || ||| || | ||||||||||| ||||| |||||||| || Sbjct 101 UUAUCCUGGGAAAACCACCUUCAUGAUCACAGUAUCACCCCUACCAGGUAAAUA 154 >> URS0000CAB135_45464 Teladorsagia circumcincta U1 spliceosomal RNA E-value: 2.6e+2 Identity: 58.79% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC-CACUU-GGGGA------GAUGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | ||| || || ||| | | || | ||| |||| ||| Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCCGUUGGCUAACCUCACCUCGAGGUUGCCACGCGGGUCAGCCUUCGC---- 87 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUG-ACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || | ||||| |||||| |||| |||||||||| Sbjct 88 -UGAAGUGCAAUGCGAGGGCCUCACCACGGGGGUCCCGCCUUCUUGAUCGCGAGAUCCCCCCAGCCAGGUAAGUU 161 >> URS00003C54A7_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.7e+2 Identity: 62.39% Query coverage: 54.68% Gaps: 6.84% Alignment: Query 73 ACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUA--AGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC-UAG 157 |||||||| ||| | | | || || ||||||| || | | |||||| ||||| | |||||||| | | | | || | | Sbjct 34 CCCACAAAUCAUGCAGCUGAGUUGCCUGCAUUUGGGGAAAUUGCAGGAGCCAGGAUACCCAGC--GUGCAAUGGGUGAGAUUCACCCUGG 121 Query 158 GCCAUGACCCUUCAUGAUCG-GCCAUA 183 | | |||| |||||| | ||| Sbjct 122 GAAAACCAACUUCUUGAUCGUGGCAUC 148 >> URS000006B1EF_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.8e+2 Identity: 54.35% Query coverage: 62.56% Gaps: 13.77% Alignment: Query 70 UCUACCACAAAUUAUGACGUCCACUCUCC---CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGG----CCACUAG 152 ||||||| |||||| || | ||| | ||||||| || | | |||| | ||||||||| ||| | Sbjct 29 AUUACCACAGAUUAUGCAGUUGCGUUUCCCCACGUUUGGGGAAAUCACAGGGGUCAGCACAUCCUGAGUGCAAUGAAUAAACCUCACCUG 118 Query 153 CCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGA----CCCCGUCCAGG 196 ||| |||||| || | |||||| || || | ||| Sbjct 119 GGUAGACCAUGAU--------AUUGACCAUAGUAUCUCCUCGGCUAGG 158 >> URS0000C9E9F4_45464 Teladorsagia circumcincta U1 spliceosomal RNA E-value: 2.8e+2 Identity: 56.89% Query coverage: 76.85% Gaps: 11.98% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU--------GGUAAGCCAGCGCACCC 128 ||||||||||||||| | |||||| || ||||| | || | || | | || | ||| |||| | || Sbjct 4 GGGCCGCGCGAACGC--AGCCCCUCACACAAAAAUUUAGCUGUUGGCGAACCUCAAUUCGAAGCUGCCACACGGGUCAGCCGGUGCU--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCU---AGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | || || ||| | || |||| |||||| | ||| |||||||||| Sbjct 89 --AAAGUGCAAUGCACGGGCCUCACCAUGGAGGUCCUG--CCUUGUUGAUCGCAAGUCUCUCCCAGCCAGGUAAGUU 161 >> URS000035E53B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.9e+2 Identity: 60.75% Query coverage: 51.23% Gaps: 2.80% Alignment: Query 73 ACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA--UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCC 160 |||| ||| | ||||| | ||||| || ||| || | | | |||| ||||||||||| | | || ||| || Sbjct 27 ACCAUGCAUUUUUCAGUCCAGUUUCCCAUUUUGGGGGAACUCUCAGGGGUCAGCACAAUGCAAGUGCAAUGGGUGAACCUUGCCCUGGGG 116 Query 161 AUGAC-CCUUCAUGAUC 176 || | || ||||||| Sbjct 117 AUACCACCAACAUGAUC 133 >> URS000054BF28_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.9e+2 Identity: 59.57% Query coverage: 67.00% Gaps: 4.96% Alignment: Query 65 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAG--CCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 ||||| |||||||| | ||| | | ||| | ||||||| |||| | | ||||| || | ||||| ||| ||| Sbjct 22 CCCCCACUACCACAUCACUUACAGUCAAAUUCCCCAAAUUUGGGGAAAUGGCAGGGGCCAGCCCAUCA--GGAGUGCCAUGGAUAAAACU 109 Query 151 AGCCUAGGCCAUGAC-CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 || || | ||| |||| || || |||| ||||||||| Sbjct 110 CACCCUGGGGAAGACACCUUUGUGGUCAUGGUAGCUCCCCUGCCAGGUAAG 160 >> URS000241DAFF_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC016724) E-value: 4.3e-40 Identity: 88.60% Query coverage: 95.07% Gaps: 0.00% Alignment: Query 11 UCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 97 ||| ||| |||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 28743 CCCAGGGACCAAAAUUUAAUUCUUUAAAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 28829 Query 98 CCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAG 184 || |||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| | ||||||||| | | | | Sbjct 28830 CCUCUUGGGGAGAUGGUAAGCCAGCGCACCCGCCAAGUGCAAUGCGGGCCACUGACCUAGGCCACGGGCCUUCAUGACCACCUGUCG 28916 Query 185 ACCCCGUCCAGGUAAGUAU 203 ||||||||||||||||||| Sbjct 28917 ACCCCGUCCAGGUAAGUAU 28935 >> URS0000197697_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3e+2 Identity: 57.14% Query coverage: 64.04% Gaps: 2.26% Alignment: Query 73 ACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU--GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCC 160 |||| ||| | ||||| | ||||| || ||| || | | |||| | ||||||||| | | || ||| || Sbjct 27 ACCAUGCAUUUUUCAGUCCAGUUUCCCAUUUUGGGGGAACUCCCAGGGGUCAGCACAAUGCUAGUGCAAUGGGUGAACCUUGCCCUGGGG 116 Query 161 AUGAC-CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || | || ||||||| |||| | ||| ||||| Sbjct 117 AUACCACCAACAUGAUCAUGAGGUCUCCCCUGCUAGGGAAGUA 159 >> URS0001962F9D_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000049214.1) E-value: 3e+2 Identity: 63.29% Query coverage: 36.95% Gaps: 5.06% Alignment: Query 92 ACUCUCCCACUUGGGGAGAUGG----UAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACC 166 | ||||| |||| | || | ||| ||| |||| || | ||||| ||||| ||| | || | |||||| Sbjct 2671 UCCCUCCCGCUUGAGAUGAGGAGACAUAAAAAAGCCCACCAACUGACUGCAAGGUGGGAAACUUGACUGGAUCAUGACU 2749 >> URS000196655C_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025014099.1) E-value: 3e+2 Identity: 63.29% Query coverage: 36.95% Gaps: 5.06% Alignment: Query 92 ACUCUCCCACUUGGGGAGAUGG----UAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACC 166 | ||||| |||| | || | ||| ||| |||| || | ||||| ||||| ||| | || | |||||| Sbjct 2675 UCCCUCCCGCUUGAGAUGAGGAGACAUAAAAAAGCCCACCAACUGACUGCAAGGUGGGAAACUUGACUGGAUCAUGACU 2753 >> URS000236F437_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC008391) E-value: 3.1e+2 Identity: 56.98% Query coverage: 42.36% Gaps: 9.30% Alignment: Query 105 GGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || | | | || || | || || ||| ||| | ||| || ||| | || ||| |||| |||||| | || | Sbjct 33076 GGUUGUUUGGAAAAGAGGG--------AACUGUAAUUUGGACAUCUACCCAAGGUAAAGAUCCUGCAUGCUCGGCCUCUGUCCAUG 33153 >> URS00023AD1A9_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC003912) E-value: 3.4e+2 Identity: 80.00% Query coverage: 21.67% Gaps: 2.22% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAG 109 |||| | |||||||| ||||| || | | |||||||||||||| Sbjct 157694 CCCCACAACCACAAAGUAUGAUGUUCUCUUCUCCCACUUGGGGGC 157738 >> URS000234A6C9_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC012456) E-value: 3.5e+2 Identity: 66.07% Query coverage: 27.59% Gaps: 0.00% Alignment: Query 127 CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAU 182 | || || ||| ||| | ||| || |||| | || ||| ||||||| ||| Sbjct 23498 GGAGGAACUGUAAUUUGGACAUCUACCCAAGGCAAGGAUCCUGCAUGAUCUGCCUC 23553 >> URS000081A915_29170 Ancylostoma caninum (dog hookworm) U1 spliceosomal RNA E-value: 3.6e+2 Identity: 56.97% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | +||+ | ||+|| || | || ||| |||| | || Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACAGGUCAGCCCGGGC---- 87 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || |||| ||||||| | |||| |||||||||| Sbjct 88 -GAAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCGCCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS000081A915_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 3.6e+2 Identity: 56.97% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | +||+ | ||+|| || | || ||| |||| | || Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACAGGUCAGCCCGGGC---- 87 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || |||| ||||||| | |||| |||||||||| Sbjct 88 -GAAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCGCCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS0000E33CF9_7266 Drosophila guanche non-coding RNA E-value: 3.7e+2 Identity: 59.63% Query coverage: 51.23% Gaps: 6.42% Alignment: Query 38 AAU-UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA--GAUGGU--AAGCCAGCG 123 ||| | ||| | |||||||||| ||| |||||| |||||| | | | ||| | ||| || | | | || | Sbjct 357 AAUAAUGUCGGGACGGCGCGAACGCCAUUCCCGGCUACCAAAAAUUACACGCACGAGUUAUUCACAUUAGGAAUAAUCGCAGAGGUCAACU 447 Query 124 CACCCACCAAGUGCAAUG 141 || | | |||||||||| Sbjct 448 CAGC--CGAAGUGCAAUG 463 >> URS00002C45D6_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.8e+2 Identity: 55.70% Query coverage: 75.37% Gaps: 4.43% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAGU 135 || | || || ||| || || | |||||| ||| | | ||| | ||| || || | | |||| || ||| ||| Sbjct 8 GAGCACAAAUGCAGUUUCCCACUGCCUCGAAUUAUACAGUCAAGUUUCCUGCAUUUGCAGAAAUCUCAGGGGUCAGCACAUCCA--GAGU 95 Query 136 GCAAUGUGGG-CCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||| || ||| || | ||||||||||| | ||| |||||||| || Sbjct 96 GCAACAGAUAAGUCUUACCCUGGGAAAACCACCUUCAUGAUCACAGUAUCAGCCCUGCCAGGUAAAUA 163 >> URS000022E374_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.9e+2 Identity: 57.64% Query coverage: 68.47% Gaps: 4.86% Alignment: Query 64 ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--GCCAGCGCACCCACCAAGUGCAAUGUG-GGCCA 148 |||| ||||| |||||||| ||| | | | | || ||| || || | | |||| || || ||||||| Sbjct 13 UUCCCCACUACCUCAAAUUAUACAGUCAAGUUUUCUGCAUUUGCAGAAAUCUCAGGUGUCAGCACAUCC--AGAGUGCAACAGACAAGUC 100 Query 149 CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || ||| || | ||||||||||| | ||| |||||||| || Sbjct 101 UUAUCCUGGGAAAACCACCUUCAUGAUCACAGUAUCAGCCCUGCCAGGUAAAUA 154 >> URS00003E28E2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.1e+2 Identity: 56.90% Query coverage: 56.16% Gaps: 1.72% Alignment: Query 63 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 |||| ||||| |||| || ||| | | |||||| ||||||| || | | || ||||||||| | || Sbjct 20 GUUCCCCAUUACCAGAAAUCAUUUAGUCAAUUUUCCCACAUUUGGGGAAAUCUCAGGGGUCAACAUAUCUGUAGUGCAAUGGGUAAUACA 109 Query 151 AGCCUAGGCCAUGACCCUUCAUGAUC 176 || || || |||| ||||| Sbjct 110 GACCCUGGAAAUUCACCUUUGUGAUC 135 >> URS00023C1DBF_15368 Brachypodium distachyon (stiff brome) long non-coding RNA (BDIS_LNC001676) E-value: 4.1e+2 Identity: 64.20% Query coverage: 34.48% Gaps: 13.58% Alignment: Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG---CCAUGACCCUU--------CAUGAUCGGCCAUAGACCCCGUCCAGGUA 198 ||||||||||| | ||||| ||||| | | | ||||||| | |||| | |||||| | || ||| || Sbjct 30924 ACCAAGUGCAAAAUUGGCCAGUAGCCCAUGACUCGAUGACCCAUCAACUUGGCAUGUUUGGCCAUCUCUCUCGCUCAGUUA 31004 >> URS000075E0AC_9601 Pongo abelii prion protein, testis-specific (PRNT) E-value: 4.4e+2 Identity: 52.38% Query coverage: 67.49% Gaps: 23.13% Alignment: Query 16 GGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 104 || || |||||| || | |||||||| || |||||||| | | || | | || ||||| Sbjct 1567 GGGUCACAAUUUACAUCAUAGAAAUUGGCAA------------------------AUAGUACAAAUUAGGGCUCCCUCACCCCUACUUG 1631 Query 105 GG----GAGAUGGUAAGCCAGCGCACCCAC-----CAAGUGCA-AUGUGGGCCACUAG 152 || ||| ||||| | ||| |||| | |||| ||| ||||| || Sbjct 1632 GGCAUAGAGCUGGUACACUAGCACACCUCUGGUUAUACAUGCAUGCGUGUGCCACCAG 1689 >> URS00023B1DCD_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC004840) E-value: 4.4e+2 Identity: 58.51% Query coverage: 45.81% Gaps: 1.06% Alignment: Query 92 ACUCUCCCACUUGGGGA-GAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCG 177 ||| ||| || | | | |||| | | || | || || ||| ||| | ||| || ||| | || ||| |||| ||| Sbjct 10831 ACUAUCCAACCUAGCCACUAUGGGUUGUUUGGACAAGGAGGAACUGUAAUUUGGACAUCUACCCAAGGUAAAGAUCCUGCAUGCUCG 10917 Query 178 GCCAUAG 184 ||| Sbjct 10918 GCCUCUA 10924 >> URS000242DAC7_3694 Populus trichocarpa (black cottonwood) long non-coding RNA (PTRI_LNC003103) E-value: 4.6e+2 Identity: 58.00% Query coverage: 43.35% Gaps: 12.00% Alignment: Query 29 AAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUA------CCACAAAUUAUGACGUCCACUCUCCC------AC 101 | ||| || || |||||| || || || |||| |||||| | | || ||||| | | | || | | Sbjct 125959 AUUUUAAAAUGUUUGCAGGGCUCGGGCCCCUGCUUACCUCCUCUAGUUCCGGCCCUGAUCAUGACCACAAAUAUCACCGCGAUAG 126043 Query 102 UUGGGGAGAUGGUAA 116 || ||||||||| | Sbjct 126044 CUGAGGAGAUGGUGA 126058 >> URS000233BD00_9606 Homo sapiens (human) HSALNT0310814 E-value: 4.7e+2 Identity: 60.42% Query coverage: 45.32% Gaps: 5.21% Alignment: Query 67 CCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG--GCCACUAGC 153 ||| || ||| | |||||| || | | | || ||||||| || | | | |||| | ||||||||| ||| | | | Sbjct 5 CCCACUGCCAAAGAUUAUGCAGUUGAGUUCUCCACAUUUGGGGAAAUUGCAGGGAUCAGCACAUCCAGAGUGCAAUGAAUAAGCCUC-ACC 94 Query 154 CUAGG 158 || || Sbjct 95 CUGGG 99 >> URS000239142B_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC005160) E-value: 4.7e+2 Identity: 63.49% Query coverage: 31.03% Gaps: 0.00% Alignment: Query 128 CACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 | || || ||| ||| | ||| || || | | || ||| |||| |||||| | || | Sbjct 41010 GAGGAACUGUAAUUUGGACAUCUACCCAAGACAAAGAUCCUGCAUGCUCGGCCUCUGUCCAAG 41072 >> URS00023FB6F4_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC010812) E-value: 4.7e+2 Identity: 57.32% Query coverage: 38.92% Gaps: 13.41% Alignment: Query 42 GGCAGGGGCCGCGCG---AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCA 120 || ||||| || | || | | || ||||||| | || || | ||| |||||||||||| || | Sbjct 30398 GGUCUGGGCCACGAGUUGAAAUUGAGC--------CCUACAAUUAUGUCAUCUACAAUUCCAAUUGGGGAGAUGGCUAGUCU 30471 >> URS000240D104_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC010812) E-value: 4.7e+2 Identity: 57.32% Query coverage: 38.92% Gaps: 13.41% Alignment: Query 42 GGCAGGGGCCGCGCG---AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCA 120 || ||||| || | || | | || ||||||| | || || | ||| |||||||||||| || | Sbjct 30724 GGUCUGGGCCACGAGUUGAAAUUGAGC--------CCUACAAUUAUGUCAUCUACAAUUCCAAUUGGGGAGAUGGCUAGUCU 30797 >> URS00026F6005_74358 Podarcis lilfordi non-coding RNA E-value: 5.2e+2 Identity: 62.79% Query coverage: 40.89% Gaps: 5.81% Alignment: Query 94 UCUCCCACUUGGGGAGAUGGUAAG--CCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCC-AUGACCCUUCAUGAUC 176 | | || ||||||| || | | | |||| |||| | ||||||||| | || ||| || | ||||||||||| Sbjct 2119 CCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACC--CAUAGUGCAAUGGAUGAUCCUCACCUUGGGAAAACCUCCUUCAUGAUC 2202 >> URS00007FC796_29170 Ancylostoma caninum (dog hookworm) U1 spliceosomal RNA E-value: 5.4e+2 Identity: 56.97% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | +||+ | ||+|| || | || ||| |||| | || Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || |||| ||||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCGCCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS00007FC796_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 5.4e+2 Identity: 56.97% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | +||+ | ||+|| || | || ||| |||| | || Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || |||| ||||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCGCCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS00023A1F07_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC013970) E-value: 5.6e+2 Identity: 55.17% Query coverage: 50.25% Gaps: 14.66% Alignment: Query 10 AUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUU-------------- 82 | || ||| |||| || ||||||||| |||| ||| | | || || || ||| || ||| || Sbjct 97516 ACCCGAGGUGCAA---CUAGAUUUGAAGACUUGGUCAGGGGCUAGUGACCGUGUCCCCACUAAGGGACAUUUUUUUAGGAAAGGAGG 97599 Query 83 AUGACGUCCACUCUCCCACUUGGGGAGAU 111 ||||| || ||| | ||||||| Sbjct 97600 AUGACCCCCGGCCUCUGCAUCUGGGAGAU 97628 >> URS00023A2410_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC013969) E-value: 5.6e+2 Identity: 55.17% Query coverage: 50.25% Gaps: 14.66% Alignment: Query 10 AUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUU-------------- 82 | || ||| |||| || ||||||||| |||| ||| | | || || || ||| || ||| || Sbjct 98221 ACCCGAGGUGCAA---CUAGAUUUGAAGACUUGGUCAGGGGCUAGUGACCGUGUCCCCACUAAGGGACAUUUUUUUAGGAAAGGAGG 98304 Query 83 AUGACGUCCACUCUCCCACUUGGGGAGAU 111 ||||| || ||| | ||||||| Sbjct 98305 AUGACCCCCGGCCUCUGCAUCUGGGAGAU 98333 >> URS00027EF012_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015033696.1) E-value: 5.8e+2 Identity: 59.74% Query coverage: 36.95% Gaps: 2.60% Alignment: Query 41 UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUA 115 ||||| || ||| || | | ||||||||||||||| || | | ||| || ||||||| | Sbjct 10515 AAACAGGGAGAGCAUGAAUGCCAUUUCUCACUACCACAAAUUAUGUAGUUGAGUUUCCUGUGUUUAGGGAGAUAAAA 10591 >> URS0000D5BC01_9606 Homo sapiens (human) non-protein coding lnc-CCDC180-1:1 E-value: 5.9e+2 Identity: 68.85% Query coverage: 30.05% Gaps: 3.28% Alignment: Query 122 CGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAU 182 | ||| |||| ||| |||||| || | | || |||| |||||| ||| |||||| Sbjct 1116 GGGUCCCCCCAACUGCUAUGUGGACCCAUGGUCUUGGCCCUGACCCAG--AGAUGGGCCAU 1174 >> URS0002575E9B_9606 Homo sapiens (human) ncRNA E-value: 5.9e+2 Identity: 68.85% Query coverage: 30.05% Gaps: 3.28% Alignment: Query 122 CGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAU 182 | ||| |||| ||| |||||| || | | || |||| |||||| ||| |||||| Sbjct 1116 GGGUCCCCCCAACUGCUAUGUGGACCCAUGGUCUUGGCCCUGACCCAG--AGAUGGGCCAU 1174 >> URS000259E3A0_9606 Homo sapiens (human) non-coding RNA E-value: 5.9e+2 Identity: 68.85% Query coverage: 30.05% Gaps: 3.28% Alignment: Query 122 CGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAU 182 | ||| |||| ||| |||||| || | | || |||| |||||| ||| |||||| Sbjct 1116 GGGUCCCCCCAACUGCUAUGUGGACCCAUGGUCUUGGCCCUGACCCAG--AGAUGGGCCAU 1174 >> URS000238B0D2_3046 Dunaliella salina (D. salina) long non-coding RNA (DSAL_LNC000236) E-value: 5.9e+2 Identity: 58.33% Query coverage: 63.55% Gaps: 6.06% Alignment: Query 75 CACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAG---CGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGG 158 || |||||| ||| ||| + ||| | | | || ||+ | |||| | | |||||||||| | || || | | Sbjct 21860 CAAAAAUUAAACCGUGCACAUACCCCGUAGAGCAGU---GCUGCUGGAGCCGCAGC--CAAAGUGCAAUGGGAGCAGCUCCAACAUG 21941 Query 159 CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 | | |||||| |||| | || | ||| ++|||||||||| Sbjct 21942 CGAACCCCCUUCGGGAUCAGGGUUACGCACCGGUUAGGUAAGUAU 21986 >> URS00024273C8_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC000139) E-value: 6e+2 Identity: 61.25% Query coverage: 39.41% Gaps: 7.50% Alignment: Query 78 AAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 ||| ||| || || ||||||| |||||||||| | || | | || | || || |||||| | ||| Sbjct 47067 AAAGUAUACUGU---CUAUCCCACUAGGGGAGAUGGAUAUAUAGAGUCC---UCAUGGGCCAUAUGGGCCUUCAAUAUAG 47140 >> URS0000422F7B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.1e+2 Identity: 63.92% Query coverage: 45.81% Gaps: 8.25% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGG--UAAGCCAGCGCACCCACCAAGUGC 137 | | |||| | |||| ||| | ||||||||| || | | ||| || ||||| | || | || | |||| | | || ||| | Sbjct 10 GUGUGAACAC--UCCCCAGCUAUCUCAAAUUAUGCCGCUGAGUUUCCUGCAGUUGGGAAAAUAGCAUAGGUCAGCUGAUC--CCUAGUAC 95 Query 138 AAUGUGG 144 |||| | Sbjct 96 AAUGGAG 102 >> URS00019A9DF0_9995 Marmota monax (woodchuck) non-coding RNA E-value: 6.2e+2 Identity: 61.04% Query coverage: 37.93% Gaps: 0.00% Alignment: Query 86 ACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAU 162 | ||| |||| || | |||||| ||| | | ||||| || ||| || | | | || |||| | ||| Sbjct 581 AGCUCCUUCUUCCCGUGUGUGUAGAUGGGAAGUCUCAGAACCCAGCAGGUGGUGUGGGAGACCCUGGCCUCGACCAG 657 >> URS0000515488_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.5e+2 Identity: 71.70% Query coverage: 25.12% Gaps: 3.77% Alignment: Query 61 CGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU 111 | ||||| || |||||||| ||| || | | |||||| ||||||| || Sbjct 17 CAGUCCCCCACUUCCACAAAUGAUGUAGUUGAGUUUCCCACAUUUGGGGAAAU 69 >> URS0000DC98ED_29170 Ancylostoma caninum (dog hookworm) U1 spliceosomal RNA E-value: 6.5e+2 Identity: 57.58% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 |||||||||| |||| | |||| | |||||||| | || | || || || | || ||| |||| | || Sbjct 4 GGGCCGCGCGUACGC--AGCCCCACACACACAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || |||| ||||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCGCCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS00026C78AD_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 6.5e+2 Identity: 60.47% Query coverage: 42.36% Gaps: 6.98% Alignment: Query 15 AGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA 100 ||| ||||| |||||| || |||| ||| | || | | | | | |||||||||| |||||| ||| || Sbjct 3024 GGGAUGAAAAUAGGCUUUUGAAAAAGUGGCGGGGACAUGUCGCCUGUGCCCUC---CCCCCACAAAUUA---CGUCCAUGCUCACA 3103 >> URS000234D8FA_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC002610) E-value: 6.6e+2 Identity: 55.75% Query coverage: 55.67% Gaps: 5.31% Alignment: Query 5 GCAAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCC 91 |||| |||||| ||||| | | ||||| | | || | | | || | | ||| | || || || | | Sbjct 62068 ACAAAUAUCAAGGAUAAAAAUGUCAUUUUGAGGGCUCGGA----GUAGGGGGAUUGUUAAUCCCACCCUCCCCAUGGGAUUA--GCA 62148 Query 92 ACUCUCCCACUUGGGGAGAUGGUAAG 117 || | |||| |||||| ||| || Sbjct 62149 ACACCCCCAUUUGGGGGGAUUCGUAG 62174 >> URS000239889E_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC002613) E-value: 6.6e+2 Identity: 55.75% Query coverage: 55.67% Gaps: 5.31% Alignment: Query 5 GCAAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCC 91 |||| |||||| ||||| | | ||||| | | || | | | || | | ||| | || || || | | Sbjct 17907 ACAAAUAUCAAGGAUAAAAAUGUCAUUUUGAGGGCUCGGA----GUAGGGGGAUUGUUAAUCCCACCCUCCCCAUGGGAUUA--GCA 17987 Query 92 ACUCUCCCACUUGGGGAGAUGGUAAG 117 || | |||| |||||| ||| || Sbjct 17988 ACACCCCCAUUUGGGGGGAUUCGUAG 18013 >> URS0000A44BA8_3981 Hevea brasiliensis miscellaneous RNA E-value: 6.9e+2 Identity: 59.05% Query coverage: 51.72% Gaps: 2.86% Alignment: Query 10 AUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA 100 |||||| | | |||| ||| |||| ||| || | ||| || || || | ||||| | |||| | | |||| | || Sbjct 113 AUCCAAUGGUAACAAUUGAAACUUGAUGAAAGGGAAAGGGUCGAAUAUACAAGUGC---UUCUACUUCUCCCUAUGGCUUUCACUACCUCA 200 Query 101 CUUGGGGAGAUGGU 114 || | | |||| Sbjct 201 UUUUGACAAAUGGC 214 >> URS0000122407_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7e+2 Identity: 58.16% Query coverage: 67.49% Gaps: 3.55% Alignment: Query 65 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUG--UGGGCCACU 150 ||||| |||| |||||||| || | | | | | ||||||| || || | ||| | |||| |||| || ||| Sbjct 22 CCCCCACUACAGCAAAUUAUACAGUUGAAUUUUCUGUAUUUGGGGAAAUUGUGGGAAUCAGCAAAACCUAAGUAUAAUGGAUGAGCC-UC 110 Query 151 AGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | |||||| | || || ||||| ||| |||||||| | Sbjct 111 ACCCUAGGAAAACCACCCUCUUGAUCAUGAUAUCUGCCCUGCCAGGUAACU 161 >> URS00023B8282_42345 Phoenix dactylifera (date palm) long non-coding RNA (PDAC_LNC001036) E-value: 7.4e+2 Identity: 61.84% Query coverage: 37.44% Gaps: 7.89% Alignment: Query 80 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCU 155 ||||||| ||||||| |||| ||| | ||| |||| || | | | |||| |||| | | | || Sbjct 8324 UUUAUGACUUCCACUCAACCACAUGGAGGGAUACUAAGUCAA------GAUCUAAUGCAGAGUGGACGCUUGGACU 8393 >> URS0000D56ED7_9606 Homo sapiens (human) non-protein coding lnc-ABCG2-3:5 E-value: 7.5e+2 Identity: 51.72% Query coverage: 66.50% Gaps: 10.34% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG 144 ||| || | ||||||||||||| | || | | |||||| | ||||| || | || ||||| |||| Sbjct 2544 GAAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGAAA-----UCACAGGGAUCAGCAAGUCUUCAGUGG 2627 Query 145 -------GCCACUAG-CCUAGGCC--AUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || | |||||| | |||||| | | || |||| | Sbjct 2628 AAUAGAGAAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUG 2683 >> URS0000D58B9D_9606 Homo sapiens (human) non-protein coding lnc-ABCG2-3:2 E-value: 7.5e+2 Identity: 51.72% Query coverage: 66.50% Gaps: 10.34% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG 144 ||| || | ||||||||||||| | || | | |||||| | ||||| || | || ||||| |||| Sbjct 3229 GAAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGAAA-----UCACAGGGAUCAGCAAGUCUUCAGUGG 3312 Query 145 -------GCCACUAG-CCUAGGCC--AUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || | |||||| | |||||| | | || |||| | Sbjct 3313 AAUAGAGAAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUG 3368 >> URS0000D5DF5D_9606 Homo sapiens (human) non-protein coding lnc-ABCG2-3:3 E-value: 7.5e+2 Identity: 51.72% Query coverage: 66.50% Gaps: 10.34% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG 144 ||| || | ||||||||||||| | || | | |||||| | ||||| || | || ||||| |||| Sbjct 2898 GAAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGAAA-----UCACAGGGAUCAGCAAGUCUUCAGUGG 2981 Query 145 -------GCCACUAG-CCUAGGCC--AUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || | |||||| | |||||| | | || |||| | Sbjct 2982 AAUAGAGAAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUG 3037 >> URS0000E99A46_9606 Homo sapiens (human) HSALNT0074768 E-value: 7.5e+2 Identity: 51.72% Query coverage: 66.50% Gaps: 10.34% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG 144 ||| || | ||||||||||||| | || | | |||||| | ||||| || | || ||||| |||| Sbjct 4672 GAAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGAAA-----UCACAGGGAUCAGCAAGUCUUCAGUGG 4755 Query 145 -------GCCACUAG-CCUAGGCC--AUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || | |||||| | |||||| | | || |||| | Sbjct 4756 AAUAGAGAAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUG 4811 >> URS0000EB8DA1_9606 Homo sapiens (human) HSALNT0074770 E-value: 7.5e+2 Identity: 51.72% Query coverage: 66.50% Gaps: 10.34% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG 144 ||| || | ||||||||||||| | || | | |||||| | ||||| || | || ||||| |||| Sbjct 2672 GAAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGAAA-----UCACAGGGAUCAGCAAGUCUUCAGUGG 2755 Query 145 -------GCCACUAG-CCUAGGCC--AUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || | |||||| | |||||| | | || |||| | Sbjct 2756 AAUAGAGAAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUG 2811 >> URS00000C9A2B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.5e+2 Identity: 56.30% Query coverage: 64.04% Gaps: 5.93% Alignment: Query 55 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU--UGGGGAGAUGGUA-AGCCAGCGCACCCACCAAGUGCAAU- 140 || || |||| |||||||||||||| || | | ||| || ||| || | |||||| || | | ||||| Sbjct 13 UGAGUGCAGUCCCCUAUUACCACAAAUUAUGCAGUUGAGUUUCCUGGAUGUGAGGAAAUCUCAGGGCCAGCACAUCA---GACUGCAAGA 99 Query 141 GUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCG-GCCAUAG 184 | | | || ||| || |||| ||| | ||||| | Sbjct 100 GACAGGCCUUACCCUGGGAACGCCAUCUUCUUGACCUUGCCAUUG 144 >> URS00023C8329_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC001929) E-value: 5.1e-23 Identity: 76.11% Query coverage: 86.70% Gaps: 2.22% Alignment: Query 28 AAAUUUG---AAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 112 ||| ||| | ||||| || ||||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| || Sbjct 2046 AAAAUUGUAUAGGAAUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGAUGUAGGCUCAACCACUUGGGCCGACC 2134 Query 113 GUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || | || | | | |||||||||| | ||| | |||||||||||| ||| |||||| |||| |||||||||||||||||| Sbjct 2135 UUAGGUAGGCACCCUUCCAAAGUGCAAUGGAAGUCACCAACCUAGGCCAUGAGUCUUACUGAUCGCCCAUUGACCCCGUCCAGGUAAGU 2223 Query 202 AU 203 || Sbjct 2224 AU 2225 >> URS00023CFF4E_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC001928) E-value: 5.1e-23 Identity: 76.11% Query coverage: 86.70% Gaps: 2.22% Alignment: Query 28 AAAUUUG---AAGAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 112 ||| ||| | ||||| || ||||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| || Sbjct 4379 AAAAUUGUAUAGGAAUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGAUGUAGGCUCAACCACUUGGGCCGACC 4467 Query 113 GUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 || | || | | | |||||||||| | ||| | |||||||||||| ||| |||||| |||| |||||||||||||||||| Sbjct 4468 UUAGGUAGGCACCCUUCCAAAGUGCAAUGGAAGUCACCAACCUAGGCCAUGAGUCUUACUGAUCGCCCAUUGACCCCGUCCAGGUAAGU 4556 Query 202 AU 203 || Sbjct 4557 AU 4558 >> URS0000D00CD2_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 7.6e+2 Identity: 53.92% Query coverage: 50.25% Gaps: 15.69% Alignment: Query 7 AAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 97 |||||||||| |||||||||||| |||| | | |||| || || | || ||||| |||| | Sbjct 817 AAAAUCCAAGCAGCAAAAUUUAAUAUUGAUGGG----AA------UAAU--GAGCGUCCCUCCCCACCCCCAAAUGUUGACUAUC----CA 891 Query 98 CCACUUGGGGA 108 | ||| || Sbjct 892 UUAGAUGGAGA 902 >> URS0000D159F1_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 7.6e+2 Identity: 53.92% Query coverage: 50.25% Gaps: 15.69% Alignment: Query 7 AAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 97 |||||||||| |||||||||||| |||| | | |||| || || | || ||||| |||| | Sbjct 99 AAAAUCCAAGCAGCAAAAUUUAAUAUUGAUGGG----AA------UAAU--GAGCGUCCCUCCCCACCCCCAAAUGUUGACUAUC----CA 173 Query 98 CCACUUGGGGA 108 | ||| || Sbjct 174 UUAGAUGGAGA 184 >> URS0000D31A45_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 7.6e+2 Identity: 53.92% Query coverage: 50.25% Gaps: 15.69% Alignment: Query 7 AAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 97 |||||||||| |||||||||||| |||| | | |||| || || | || ||||| |||| | Sbjct 62 AAAAUCCAAGCAGCAAAAUUUAAUAUUGAUGGG----AA------UAAU--GAGCGUCCCUCCCCACCCCCAAAUGUUGACUAUC----CA 136 Query 98 CCACUUGGGGA 108 | ||| || Sbjct 137 UUAGAUGGAGA 147 >> URS00022B7D2F_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000086186.1) E-value: 7.7e+2 Identity: 57.66% Query coverage: 53.69% Gaps: 3.60% Alignment: Query 92 ACUCUCCCACUUGGGGAGAUGGUAAGCCAGC--GCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCC 180 | ||||| || ||||| || || | | | | | || ||| ||| || ||||| || | || | || ||| || | Sbjct 356 AGAUUCCCAUUUUGGGAGUUGCUAUGUGACCAAGGUCUGCCCCUGUGGUAUGGGGACCACUUGCUCAUGCAGUUACAGUUCUUGCCUAACA 446 Query 181 AUAGACCCCGUCCAGGUAAG 200 || ||| || |||||| Sbjct 447 --GGAGCCCAUCAUGGUAAG 464 >> URS0000127726_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.9e+2 Identity: 58.02% Query coverage: 63.05% Gaps: 2.29% Alignment: Query 73 ACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCC 160 |||||| ||| | ||| | |||| ||||||| || | | |||| | |||| ||||||| | | || || || Sbjct 30 ACCACACAUUUUUCAUCCCAGUUUCCCGAGUUUGGGGAAAUCUCAGGGGUCAGCACACCCCAAAUGCAAUGGGUGAACCUUCCCCUGGGG 119 Query 161 AUGAC-CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 || | || || |||| ||| | | ||||||| Sbjct 120 AUACCACCAACACGAUCAUGAUGUCUCCCUGGCUAGGUAAG 160 >> URS000234884D_9606 Homo sapiens (human) HSALNT0320799 E-value: 8e+2 Identity: 51.39% Query coverage: 66.01% Gaps: 10.42% Alignment: Query 57 AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG- 144 || || | ||||||||||||| | || | | |||||| | ||||| || | || ||||| |||| Sbjct 1068 AAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGAAA-----UCACAGGGAUCAGCAAGUCUUCAGUGGA 1151 Query 145 ------GCCACUAG-CCUAGGCC--AUGACCCUUCAUGAUCGGCCAUAGACCCCG 190 || | |||||| | |||||| | | || |||| | Sbjct 1152 AUAGAGAAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUG 1206 >> URS00009AF1AE_10090 Mus musculus long non-coding RNA NONMMUT059646.2 E-value: 8.1e+2 Identity: 53.40% Query coverage: 48.28% Gaps: 8.74% Alignment: Query 44 CAGGGGCCGCGCGAACGCGUACCCCCUC-----UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCC 128 | | ||| |||| | ||| || ||||| | | | | ||||| | | ||||| ||||| |||| || || Sbjct 338 UCUGAGUCGCUGGAACAGUUUUCCCUUCCAUGAUACCAUAGCUGAGCAUGUCCAUUGCUCUCAAGGGGGAUAUGGUGAGCCUGCUAUCCA 427 Query 129 ACCAAGUGCAAUG 141 || || | | Sbjct 428 ACUAAA----AAG 436 >> URS00007FFF84_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 8.1e+2 Identity: 57.58% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 |||||||||| |||| |||| | || ||||| | || | || || || | || ||| |||| | || Sbjct 4 GGGCCGCGCGUACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACU-AGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || | | | || | |||| ||||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUUCCGCCUUGAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS000217F50C_42100 Phocoena sinus (vaquita) lncRNA (ENSPSNG00000014739.1) E-value: 8.1e+2 Identity: 59.77% Query coverage: 42.86% Gaps: 1.15% Alignment: Query 14 AAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA 100 ||| | | | | ||||||| ||||||| | | | ||| |||| |||| ||| | |||| | |||| |||| Sbjct 4220 AAGUGGUUUGACUCAGUUUUGAAGCCCUGGCAGGAGAAGGACUG-UCCGUUCCCCUUCUAGAACAGCUGAUGAAGCCCACAACCCCA 4305 >> URS00008356DC_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 8.2e+2 Identity: 57.58% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | || | || || || | || ||| |||| | || Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACU-AGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || | | | || | |||| |||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUUCCGCCUUGUUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS000236A5D0_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010304) E-value: 1.5e-22 Identity: 74.59% Query coverage: 91.13% Gaps: 1.08% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 | ||| ||||| || | | | || ||||||||||||||||| ||||| || |||||||||||||| ||| ||||||||| Sbjct 7070 GGAAAUUUUAACUU--AGGUUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGUAACAAAUUAUGACGUAGGCUCGACCACUUGGGC 7156 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGG 196 || || || || | || | |||||||||| || ||| |||||||||||| ||| |||||| |||| ||||||||||||| Sbjct 7157 CGACCUUAGGCAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUAGGUCUUAUUGAUCGCCCAUUGACCCCGUCCAGG 7245 Query 197 UAAGUAU 203 ||||||| Sbjct 7246 UAAGUAU 7252 >> URS0002371E14_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010302) E-value: 1.5e-22 Identity: 74.59% Query coverage: 91.13% Gaps: 1.08% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 | ||| ||||| || | | | || ||||||||||||||||| ||||| || |||||||||||||| ||| ||||||||| Sbjct 9593 GGAAAUUUUAACUU--AGGUUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGUAACAAAUUAUGACGUAGGCUCGACCACUUGGGC 9679 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGG 196 || || || || | || | |||||||||| || ||| |||||||||||| ||| |||||| |||| ||||||||||||| Sbjct 9680 CGACCUUAGGCAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUAGGUCUUAUUGAUCGCCCAUUGACCCCGUCCAGG 9768 Query 197 UAAGUAU 203 ||||||| Sbjct 9769 UAAGUAU 9775 >> URS000237DA26_218851 Aquilegia coerulea (A. coerulea) long non-coding RNA (ACOE_LNC000826) E-value: 8.2e+2 Identity: 57.14% Query coverage: 48.28% Gaps: 8.16% Alignment: Query 68 CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC 154 | ||||||| |||||| || |||| |||||||| | | || ||| | | || || | ||||| | Sbjct 2250 GUUUGACCACAAUUUAUGAUGUAGACUCCUCCACUUGGAU---UCUUUCGCAAGCACCCUUCAUAAUUGGA-----AAUCACUAACG 2328 Query 155 UAGGCCAUGAC 165 |||| | ||| Sbjct 2329 UAGGACCUGAG 2339 >> URS00023AFD87_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010303) E-value: 1.5e-22 Identity: 74.59% Query coverage: 91.13% Gaps: 1.08% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 | ||| ||||| || | | | || ||||||||||||||||| ||||| || |||||||||||||| ||| ||||||||| Sbjct 8966 GGAAAUUUUAACUU--AGGUUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGUAACAAAUUAUGACGUAGGCUCGACCACUUGGGC 9052 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGG 196 || || || || | || | |||||||||| || ||| |||||||||||| ||| |||||| |||| ||||||||||||| Sbjct 9053 CGACCUUAGGCAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUAGGUCUUAUUGAUCGCCCAUUGACCCCGUCCAGG 9141 Query 197 UAAGUAU 203 ||||||| Sbjct 9142 UAAGUAU 9148 >> URS00023D2D5F_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010304) E-value: 1.5e-22 Identity: 74.59% Query coverage: 91.13% Gaps: 1.08% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 | ||| ||||| || | | | || ||||||||||||||||| ||||| || |||||||||||||| ||| ||||||||| Sbjct 7074 GGAAAUUUUAACUU--AGGUUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGUAACAAAUUAUGACGUAGGCUCGACCACUUGGGC 7160 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGG 196 || || || || | || | |||||||||| || ||| |||||||||||| ||| |||||| |||| ||||||||||||| Sbjct 7161 CGACCUUAGGCAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUAGGUCUUAUUGAUCGCCCAUUGACCCCGUCCAGG 7249 Query 197 UAAGUAU 203 ||||||| Sbjct 7250 UAAGUAU 7256 >> URS00023FB12B_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010302) E-value: 1.5e-22 Identity: 74.59% Query coverage: 91.13% Gaps: 1.08% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 | ||| ||||| || | | | || ||||||||||||||||| ||||| || |||||||||||||| ||| ||||||||| Sbjct 9667 GGAAAUUUUAACUU--AGGUUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGUAACAAAUUAUGACGUAGGCUCGACCACUUGGGC 9753 Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGG 196 || || || || | || | |||||||||| || ||| |||||||||||| ||| |||||| |||| ||||||||||||| Sbjct 9754 CGACCUUAGGCAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUAGGUCUUAUUGAUCGCCCAUUGACCCCGUCCAGG 9842 Query 197 UAAGUAU 203 ||||||| Sbjct 9843 UAAGUAU 9849 >> URS0000E83B77_96440 Salvator merianae (Argentine black and white tegu) lncRNA (ENSSMRG00000022345.1) E-value: 8.3e+2 Identity: 55.65% Query coverage: 52.22% Gaps: 7.83% Alignment: Query 32 UUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGAC-------GUCCACUCUCCCACUUGGGGAGAUGG- 113 || | || | |||| | ||||| || || || ||||||||| ||| | | | | | || | | |||| | Sbjct 335 UUCAGUAACUUCAAGGGAUAGUGCGAAUGCAGUCCUCCACUACCACAAUUUAGCAAAGGAAAACUGCUCAAUAGCAGUAGAGGAGCAGAU 424 Query 114 -UAAGCCAGCGCACCCACCAAGUGC 137 | ||| || | || |||||| | Sbjct 425 UUCAGCAAGUGUGCCUACCAAGAGG 449 >> URS000194B38C_9823 Sus scrofa (pig) lncRNA (ENSSSCG00030003464.1) E-value: 8.4e+2 Identity: 62.82% Query coverage: 36.45% Gaps: 5.13% Alignment: Query 92 ACUCUCCCACUUGGGGAGAUGG----UAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGAC 165 | ||||| |||| | || | ||| ||| |||| || | ||||| ||||| ||| | || | | |||| Sbjct 2676 UCCCUCCCGCUUGAGAUGAGGAGACAUAAAAAAGCCCACCAACUGACUGCAAGGUGGGAAACUUGACUGGAUCGUGAC 2753 >> URS0001963E26_9823 Sus scrofa (pig) lncRNA (ENSSSCG00055001734.1) E-value: 8.4e+2 Identity: 62.82% Query coverage: 36.45% Gaps: 5.13% Alignment: Query 92 ACUCUCCCACUUGGGGAGAUGG----UAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGAC 165 | ||||| |||| | || | ||| ||| |||| || | ||||| ||||| ||| | || | | |||| Sbjct 2682 UCCCUCCCGCUUGAGAUGAGGAGACAUAAAAAAGCCCACCAACUGACUGCAAGGUGGGAAACUUGACUGGAUCGUGAC 2759 >> URS000196E604_9823 Sus scrofa (pig) lncRNA (ENSSSCG00040060169.1) E-value: 8.4e+2 Identity: 62.82% Query coverage: 36.45% Gaps: 5.13% Alignment: Query 92 ACUCUCCCACUUGGGGAGAUGG----UAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGAC 165 | ||||| |||| | || | ||| ||| |||| || | ||||| ||||| ||| | || | | |||| Sbjct 2677 UCCCUCCCGCUUGAGAUGAGGAGACAUAAAAAAGCCCACCAACUGACUGCAAGGUGGGAAACUUGACUGGAUCGUGAC 2754 >> URS0000B6E65F_3981 Hevea brasiliensis miscellaneous RNA E-value: 8.5e+2 Identity: 53.70% Query coverage: 67.98% Gaps: 15.43% Alignment: Query 16 GGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGG-----GCCGCGCGAACGCGUACC---------------CCCUCUACCACA-AAUUA 83 | ||||| |||| | |||||| |||||| || | | | || || || | | | | || || | Sbjct 1866 GAAGCAACAUUUGGACGUGAAGAUUUGGCAUGGCAUGGAAAGAGUGGACAUGUGCCGUGAUGGUGGCCAUCACAUGCAGCGCAUAAGUG 1954 Query 84 UGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCAC-CCACCAAGUGCAAUGUGGGCCACUAGC 153 |||||||||| | || |||| ||| |||||| || |||| ||||||| ||||| Sbjct 1955 GGACGUCCACUUCCAUUGUAUUUGGGACAUG-CAAGCCAACGUGAAAUGGAGAGUGAAAUGUGGCGCACUAAA 2026 >> URS00005D0A6C_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.7e+2 Identity: 61.80% Query coverage: 41.87% Gaps: 6.74% Alignment: Query 66 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA----UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 |||| | ||||| |||| || ||||| | || || || || || | | | ||| || | ||||||||| || ||| Sbjct 19 CCCCACAACCACCAAUUCUGCAGUCCAGUUUCUCAAAUGUGGGGAAUUUUCAGAGGUCAGGACAUCA--GUAGUGCAAUGGAGGAAACU 105 >> URS0000D581B9_9606 Homo sapiens (human) non-protein coding lnc-ABCG2-3:4 E-value: 8.8e+2 Identity: 51.05% Query coverage: 65.52% Gaps: 10.49% Alignment: Query 57 AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG--- 144 || || | ||||||||||||| | || | | |||||| | ||||| || | || ||||| |||| Sbjct 644 AAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGAAA-----UCACAGGGAUCAGCAAGUCUUCAGUGGAAU 729 Query 145 ----GCCACUAG-CCUAGGCC--AUGACCCUUCAUGAUCGGCCAUAGACCCC 189 || | |||||| | |||||| | | || |||| Sbjct 730 AGAGAAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCU 781 >> URS0000E93004_9606 Homo sapiens (human) HSALNT0074769 E-value: 8.8e+2 Identity: 51.05% Query coverage: 65.52% Gaps: 10.49% Alignment: Query 57 AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG--- 144 || || | ||||||||||||| | || | | |||||| | ||||| || | || ||||| |||| Sbjct 772 AAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGAAA-----UCACAGGGAUCAGCAAGUCUUCAGUGGAAU 857 Query 145 ----GCCACUAG-CCUAGGCC--AUGACCCUUCAUGAUCGGCCAUAGACCCC 189 || | |||||| | |||||| | | || |||| Sbjct 858 AGAGAAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCU 909 >> URS00009B4F19_9606 Homo sapiens (human) HSALNT0211630 E-value: 8.9e+2 Identity: 53.92% Query coverage: 50.25% Gaps: 15.69% Alignment: Query 7 AAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 97 |||||||||| |||||||||||| |||| | | |||| || || | || ||||| |||| | Sbjct 748 AAAAUCCAAGCAGCAAAAUUUAAUAUUGAUGGG----AA------UAAU--GAGCGUCCCUCCCCACCCCCAAAUGUUGACUAUC----CA 822 Query 98 CCACUUGGGGA 108 | ||| || Sbjct 823 UUAGAUGGAGA 833 >> URS00023F7828_15368 Brachypodium distachyon (stiff brome) long non-coding RNA (BDIS_LNC001545) E-value: 9.1e+2 Identity: 63.29% Query coverage: 33.50% Gaps: 13.92% Alignment: Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG---CCAUGACCCUUC--------AUGAUCGGCCAUAGACCCCGUCCAGG 196 ||||||||||| ||| ||| ||||| | | | ||||||| || ||| | |||||| | || ||| Sbjct 66385 ACCAAGUGCAAAUUGGCCCAGUAGCCCAUGACUCGAUGACCCAUCAAUUUGGUAUGUUUGGCCAUCUCUCUCGCUCAGU 66463 >> URS000219969A_158383 Olea europaea subsp. europaea non-coding RNA E-value: 9.2e+2 Identity: 55.04% Query coverage: 59.11% Gaps: 9.30% Alignment: Query 28 AAAUUUGAAGAAUUGGCAGGGGCC-------GCGCGAACG--CGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 105 || | | | || || | ||||| | ||| || | | || |||||||| | | || ||| || ||| Sbjct 1833 GAAGUGAAGGGAUGGGUAAGGGCCAUAAAGUGGGCGUACUUACUCAACCUAUCUACCACCACUAAUACCGUAUCCUUUCCA---GAA 1916 Query 106 GGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCC 147 | || ||||||||| | | |||| | ||||| || Sbjct 1917 GAAGUUGGUAAGCCUUCAAUAAAAUCAAGCGUAAUGUCUUCC 1958 >> URS000236ADBC_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC000433) E-value: 9.5e+2 Identity: 58.70% Query coverage: 43.35% Gaps: 4.35% Alignment: Query 28 AAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU----ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 || | || |||| | ||| | ||| | | || | | | | ||| || | || | || |||| || |||||||| Sbjct 36633 AAGGUGGACGAAUCUGAAGGCGGCGCUCAAGCGAUUUUUUGGAACUUUUCCCAGAAUUCAUCUCCUCAGUUCUCUCAAUUGGGGAGG 36719 Query 111 UGGUA 115 ||| | Sbjct 36720 UGGAA 36724 >> URS00023B8A11_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC000433) E-value: 9.5e+2 Identity: 58.70% Query coverage: 43.35% Gaps: 4.35% Alignment: Query 28 AAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU----ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 || | || |||| | ||| | ||| | | || | | | | ||| || | || | || |||| || |||||||| Sbjct 12243 AAGGUGGACGAAUCUGAAGGCGGCGCUCAAGCGAUUUUUUGGAACUUUUCCCAGAAUUCAUCUCCUCAGUUCUCUCAAUUGGGGAGG 12329 Query 111 UGGUA 115 ||| | Sbjct 12330 UGGAA 12334 >> URS0000CECC48_9598 Pan troglodytes (chimpanzee) retained intron E-value: 1e+3 Identity: 57.83% Query coverage: 40.89% Gaps: 14.46% Alignment: Query 7 AAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 89 |||||||||| |||||||||||| |||| | | |||| || || | || ||||| |||| Sbjct 62 AAAAUCCAAGCAGCAAAAUUUAAUAUUGAUGGG----AA------UAAU--GAGCGUCCCUCCCCACCCCCAAAUGUUGACUA 132 >> URS0000D3A901_9598 Pan troglodytes (chimpanzee) retained intron E-value: 1e+3 Identity: 57.83% Query coverage: 40.89% Gaps: 14.46% Alignment: Query 7 AAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 89 |||||||||| |||||||||||| |||| | | |||| || || | || ||||| |||| Sbjct 825 AAAAUCCAAGCAGCAAAAUUUAAUAUUGAUGGG----AA------UAAU--GAGCGUCCCUCCCCACCCCCAAAUGUUGACUA 895 >> URS0000D437B7_9598 Pan troglodytes (chimpanzee) retained intron E-value: 1e+3 Identity: 57.83% Query coverage: 40.89% Gaps: 14.46% Alignment: Query 7 AAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 89 |||||||||| |||||||||||| |||| | | |||| || || | || ||||| |||| Sbjct 99 AAAAUCCAAGCAGCAAAAUUUAAUAUUGAUGGG----AA------UAAU--GAGCGUCCCUCCCCACCCCCAAAUGUUGACUA 169 >> URS000234AC48_37334 Citrus maxima (C. maxima) long non-coding RNA (CMAX_LNC003383) E-value: 1e+3 Identity: 52.21% Query coverage: 52.22% Gaps: 22.06% Alignment: Query 70 UCUACCACAAA---------UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC---------CCACCAA-- 133 || |||| ||| || || | | | ||||||||| | | ||| ||| |||| || ||| | Sbjct 336864 UCAACCAUAAACUCGUGUAUUUGAGAUGGCUUCACUCCCACUUUGUGUAAUGAUAAAACAGCCGACAAGUCGGGACCAGUCACU 336947 Query 134 -----GUG-----CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAU 175 ||| ||||||| ||||||| |||| || | |||| Sbjct 336948 CCUCUGUGGGACCUAAUGUGGUGCACUAGCUCAGGCGGUGUUAAAUUGUGAU 336999 >> URS000234B5C4_37334 Citrus maxima (C. maxima) long non-coding RNA (CMAX_LNC003392) E-value: 1e+3 Identity: 52.21% Query coverage: 52.22% Gaps: 22.06% Alignment: Query 70 UCUACCACAAA---------UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC---------CCACCAA---- 133 || |||| ||| || || | | | ||||||||| | | ||| ||| |||| || ||| | Sbjct 33213 UCAACCAUAAACUCGUGUAUUUGAGAUGGCUUCACUCCCACUUUGUGUAAUGAUAAAACAGCCGACAAGUCGGGACCAGUCACUCC 33298 Query 134 ---GUG-----CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAU 175 ||| ||||||| ||||||| |||| || | |||| Sbjct 33299 UCUGUGGGACCUAAUGUGGUGCACUAGCUCAGGCGGUGUUAAAUUGUGAU 33348 >> URS0002399B0A_37334 Citrus maxima (C. maxima) long non-coding RNA (CMAX_LNC003382) E-value: 1e+3 Identity: 52.21% Query coverage: 52.22% Gaps: 22.06% Alignment: Query 70 UCUACCACAAA---------UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC---------CCACCAA---- 133 || |||| ||| || || | | | ||||||||| | | ||| ||| |||| || ||| | Sbjct 34505 UCAACCAUAAACUCGUGUAUUUGAGAUGGCUUCACUCCCACUUUGUGUAAUGAUAAAACAGCCGACAAGUCGGGACCAGUCACUCC 34590 Query 134 ---GUG-----CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAU 175 ||| ||||||| ||||||| |||| || | |||| Sbjct 34591 UCUGUGGGACCUAAUGUGGUGCACUAGCUCAGGCGGUGUUAAAUUGUGAU 34640 >> URS000239FB96_37334 Citrus maxima (C. maxima) long non-coding RNA (CMAX_LNC003382) E-value: 1e+3 Identity: 52.21% Query coverage: 52.22% Gaps: 22.06% Alignment: Query 70 UCUACCACAAA---------UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC---------CCACCAA-- 133 || |||| ||| || || | | | ||||||||| | | ||| ||| |||| || ||| | Sbjct 337117 UCAACCAUAAACUCGUGUAUUUGAGAUGGCUUCACUCCCACUUUGUGUAAUGAUAAAACAGCCGACAAGUCGGGACCAGUCACU 337200 Query 134 -----GUG-----CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAU 175 ||| ||||||| ||||||| |||| || | |||| Sbjct 337201 CCUCUGUGGGACCUAAUGUGGUGCACUAGCUCAGGCGGUGUUAAAUUGUGAU 337252 >> URS00023BB652_37334 Citrus maxima (C. maxima) long non-coding RNA (CMAX_LNC003388) E-value: 1e+3 Identity: 52.21% Query coverage: 52.22% Gaps: 22.06% Alignment: Query 70 UCUACCACAAA---------UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC---------CCACCAA-- 133 || |||| ||| || || | | | ||||||||| | | ||| ||| |||| || ||| | Sbjct 231360 UCAACCAUAAACUCGUGUAUUUGAGAUGGCUUCACUCCCACUUUGUGUAAUGAUAAAACAGCCGACAAGUCGGGACCAGUCACU 231443 Query 134 -----GUG-----CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAU 175 ||| ||||||| ||||||| |||| || | |||| Sbjct 231444 CCUCUGUGGGACCUAAUGUGGUGCACUAGCUCAGGCGGUGUUAAAUUGUGAU 231495 >> URS00023DA66A_37334 Citrus maxima (C. maxima) long non-coding RNA (CMAX_LNC003382) E-value: 1e+3 Identity: 52.21% Query coverage: 52.22% Gaps: 22.06% Alignment: Query 70 UCUACCACAAA---------UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC---------CCACCAA-- 133 || |||| ||| || || | | | ||||||||| | | ||| ||| |||| || ||| | Sbjct 337070 UCAACCAUAAACUCGUGUAUUUGAGAUGGCUUCACUCCCACUUUGUGUAAUGAUAAAACAGCCGACAAGUCGGGACCAGUCACU 337153 Query 134 -----GUG-----CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAU 175 ||| ||||||| ||||||| |||| || | |||| Sbjct 337154 CCUCUGUGGGACCUAAUGUGGUGCACUAGCUCAGGCGGUGUUAAAUUGUGAU 337205 >> URS000196706D_9823 Sus scrofa (pig) lncRNA (ENSSSCG00015055558.1) E-value: 1.1e+3 Identity: 62.82% Query coverage: 36.45% Gaps: 5.13% Alignment: Query 92 ACUCUCCCACUUGGGGAGAUGG----UAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGAC 165 | ||||| |||| | || | ||| ||| |||| || | ||||| ||||| ||| | || | | |||| Sbjct 2912 UCCCUCCCGCUUGAGAUGAGGAGACAUAAAAAAGCCCACCAACUGACUGCAAGGUGGGAAACUUGACUGGAUCGUGAC 2989 >> URS00023A769E_2711 Citrus sinensis (sweet orange) long non-coding RNA (CSIN_LNC003383) E-value: 1.1e+3 Identity: 51.47% Query coverage: 52.22% Gaps: 22.06% Alignment: Query 71 CUACCACAAA---------UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC---------CCACCAA---- 133 | |||| ||| || || | | | ||||||||| | | ||| ||| |||| || ||| | Sbjct 141585 CAACCAUAAACUCGUGUAUUUGAGAUGGCUUCACUCCCACUUUGUGUAAUGAUAAAACAGCCGACAAGUCGGGACCAGUCACUCC 141669 Query 134 ---GUG-----CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||| ||||||| ||||||| |||| || | |||| Sbjct 141670 UCUGUGGGACCUAAUGUGGUGCACUAGCUCAGGCGGUGUUAAAUUGUGAUU 141720 >> URS00023ADC1B_2711 Citrus sinensis (sweet orange) long non-coding RNA (CSIN_LNC003383) E-value: 1.1e+3 Identity: 51.47% Query coverage: 52.22% Gaps: 22.06% Alignment: Query 71 CUACCACAAA---------UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC---------CCACCAA---- 133 | |||| ||| || || | | | ||||||||| | | ||| ||| |||| || ||| | Sbjct 141555 CAACCAUAAACUCGUGUAUUUGAGAUGGCUUCACUCCCACUUUGUGUAAUGAUAAAACAGCCGACAAGUCGGGACCAGUCACUCC 141639 Query 134 ---GUG-----CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||| ||||||| ||||||| |||| || | |||| Sbjct 141640 UCUGUGGGACCUAAUGUGGUGCACUAGCUCAGGCGGUGUUAAAUUGUGAUU 141690 >> URS00023B49BD_2711 Citrus sinensis (sweet orange) long non-coding RNA (CSIN_LNC003386) E-value: 1.1e+3 Identity: 51.47% Query coverage: 52.22% Gaps: 22.06% Alignment: Query 71 CUACCACAAA---------UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC---------CCACCAA------ 133 | |||| ||| || || | | | ||||||||| | | ||| ||| |||| || ||| | Sbjct 63951 CAACCAUAAACUCGUGUAUUUGAGAUGGCUUCACUCCCACUUUGUGUAAUGAUAAAACAGCCGACAAGUCGGGACCAGUCACUCCUC 64037 Query 134 -GUG-----CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||| ||||||| ||||||| |||| || | |||| Sbjct 64038 UGUGGGACCUAAUGUGGUGCACUAGCUCAGGCGGUGUUAAAUUGUGAUU 64086 >> URS000240203F_37334 Citrus maxima (C. maxima) long non-coding RNA (CMAX_LNC003396) E-value: 1.1e+3 Identity: 51.47% Query coverage: 52.22% Gaps: 22.06% Alignment: Query 71 CUACCACAAA---------UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAC---------CCACCAA--- 133 | |||| ||| || || | | | ||||||||| | | ||| ||| |||| || ||| | Sbjct 112915 CAACCAUAAACUCGUGUAUUUGAGAUGGCUUCACUCCCACUUUGUGUAAUGAUAAAACAGCCGACAAGUCGGGACCAGUCACUC 112998 Query 134 ----GUG-----CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 ||| ||||||| ||||||| |||| || | |||| Sbjct 112999 CUCUGUGGGACCUAAUGUGGUGCACUAGCUCAGGCGGUGUUAAAUUGUGAUU 113050 >> URS00002A1294_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e+3 Identity: 60.19% Query coverage: 50.74% Gaps: 6.48% Alignment: Query 74 CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA----UGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGC 159 ||| | | | ||||| | |||| || ||| || | | | ||| ||| | ||||||||||| | | || ||| || Sbjct 27 CCAUGCAGUUUUCAGUCCAGUUUCCCUAUUUGGGGGAACUCUCGGGGGUCAG--CACACUGCAAGUGCAAUGGGUGAACCUUGCCCUGGG 114 Query 160 CAUGAC-CCUUCAUGAUC 176 || | || ||||||| Sbjct 115 GAUACCACCAACAUGAUC 132 >> URS000237B4E8_3046 Dunaliella salina (D. salina) long non-coding RNA (DSAL_LNC000238) E-value: 1.1e+3 Identity: 57.50% Query coverage: 37.44% Gaps: 5.00% Alignment: Query 78 AAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA----GUGCAAUGUGGGCCACUAGC 153 | ||| | |||| | | ||||||| || | | || | ||||||| | || |||||||||| | Sbjct 7893 ACAUUGCAAAUCCCACGUUUGAAUUUGGGGAAAUUGCAUGCGCGUACACCCACUCAUGCAUCUCAUUGUGGGCCACCUGG 7972 >> URS0002398D86_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC021666) E-value: 1.1e+3 Identity: 58.14% Query coverage: 42.36% Gaps: 0.00% Alignment: Query 83 AUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCU 168 | |||| || || | ||| | | | || ||| | || | || | | | ||||| ||| ||||| |||| | | | Sbjct 44957 AGGACGGAUACGCUAACGUUUGAAGUGGUAAAAAUCCAAAGUACGUAUCACGCCCUGUUUGGGCGACUGGCCUAUGCCAAGUUCAU 45042 >> URS000196AA07_9823 Sus scrofa (pig) lncRNA (ENSSSCG00015003206.1) E-value: 1.2e+3 Identity: 55.45% Query coverage: 49.75% Gaps: 0.00% Alignment: Query 14 AAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 102 || | ||||| |||||||| | ||| | || || | | ||| || ||| | | || |||||| ||| | Sbjct 2051 CAGAACCAAAAGUUAAAUUUAGGCUGGUCUCAGAGUCCAUGCUCUUGGGCCCCCUACCUUCCAAAUUAUGUGUUGUCCACAGUCCUAGG 2139 Query 103 UGGGGAGAUGGU 114 ||| | ||| Sbjct 2140 UGGACAAUGGGU 2151 >> URS0000E93526_9606 Homo sapiens (human) HSALNT0215738 E-value: 1.3e+3 Identity: 60.58% Query coverage: 49.75% Gaps: 3.85% Alignment: Query 41 UGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU--UGGGGAGAUGGUAAGCCAGCGCACCC 128 | |||||| || |||| | ||||| |||||| || | | | | | | ||||||| |||||| || | | | |||| Sbjct 251 UUCCAGGGGAAAGCAUGAACACAG-CCCCCAUGACCACAGAUGACGCAGCCGAGUUUCCCACUUUUGGGGAAAUUGCAGGGGUCAGCACGU 340 Query 129 ACCAAGUGCAAUG 141 |||||| || Sbjct 341 CUGGAGUGCAGUG 353 >> URS0000EB10E5_9606 Homo sapiens (human) HSALNT0215740 E-value: 1.3e+3 Identity: 60.58% Query coverage: 49.75% Gaps: 3.85% Alignment: Query 41 UGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU--UGGGGAGAUGGUAAGCCAGCGCACCC 128 | |||||| || |||| | ||||| |||||| || | | | | | | ||||||| |||||| || | | | |||| Sbjct 165 UUCCAGGGGAAAGCAUGAACACAG-CCCCCAUGACCACAGAUGACGCAGCCGAGUUUCCCACUUUUGGGGAAAUUGCAGGGGUCAGCACGU 254 Query 129 ACCAAGUGCAAUG 141 |||||| || Sbjct 255 CUGGAGUGCAGUG 267 >> URS00023A5ECC_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC007216) E-value: 1.3e+3 Identity: 56.00% Query coverage: 49.26% Gaps: 0.00% Alignment: Query 12 CCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC 98 ||||| | || ||| |||| ||| ||| ||||| | ||| || ||| ||| || | ||| ||| Sbjct 22546 CCAAGAAAGAAGCAUUAGAUUUUAAGCUUUGAUUUGGGCCAACACGGUGUAUACACCUGAGCCCAGAAACAUGGAGGCCCAUUCUAU 22632 Query 99 CACUUGGGGAGAU 111 |||||||| | Sbjct 22633 CACUUGGGAAUUG 22645 >> URS00023B2A45_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC007216) E-value: 1.3e-22 Identity: 73.58% Query coverage: 93.60% Gaps: 1.55% Alignment: Query 14 AAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA 100 || || ||||| | | | || ||| ||||||||||||||||| ||||| || | |||||||||||||| |||| || Sbjct 13621 UAGAAGGAAAAUAUUUAGACUGAAAACUGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCUUCCU 13707 Query 101 CUUGGGG-AGAUGGUAAGCCAGCGCAC--CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAG 184 ||| ||| ||| || |||| | | ||| | |||||||| | ||||| |||||||||||| |||| || || ||||| | Sbjct 13708 CUUAGGGAAGACCUUAGAACAGCACCCCUCCAGUAUGUGCAAUGGAGAUCACUACUCUAGGCCAUGACUCUUCUUGGUCAGCCAUUG 13794 Query 185 ACCCCGUCCAGGUAAGUAU 203 ||||||||||||||||||| Sbjct 13795 ACCCCGUCCAGGUAAGUAU 13813 >> URS00023C5B80_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC007216) E-value: 1.3e-22 Identity: 73.58% Query coverage: 93.60% Gaps: 1.55% Alignment: Query 14 AAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 102 || || ||||| | | | || ||| ||||||||||||||||| ||||| || | |||||||||||||| |||| || || Sbjct 9431 UAGAAGGAAAAUAUUUAGACUGAAAACUGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCUUCCUCU 9519 Query 103 UGGGG-AGAUGGUAAGCCAGCGCAC--CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCC 188 | ||| ||| || |||| | | ||| | |||||||| | ||||| |||||||||||| |||| || || ||||| ||||| Sbjct 9520 UAGGGAAGACCUUAGAACAGCACCCCUCCAGUAUGUGCAAUGGAGAUCACUACUCUAGGCCAUGACUCUUCUUGGUCAGCCAUUGACCC 9608 Query 189 CGUCCAGGUAAGUAU 203 ||||||||||||||| Sbjct 9609 CGUCCAGGUAAGUAU 9623 >> URS00023CF74A_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC007216) E-value: 1.3e-22 Identity: 73.58% Query coverage: 93.60% Gaps: 1.55% Alignment: Query 14 AAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 102 || || ||||| | | | || ||| ||||||||||||||||| ||||| || | |||||||||||||| |||| || || Sbjct 3649 UAGAAGGAAAAUAUUUAGACUGAAAACUGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCUUCCUCU 3737 Query 103 UGGGG-AGAUGGUAAGCCAGCGCAC--CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCC 188 | ||| ||| || |||| | | ||| | |||||||| | ||||| |||||||||||| |||| || || ||||| ||||| Sbjct 3738 UAGGGAAGACCUUAGAACAGCACCCCUCCAGUAUGUGCAAUGGAGAUCACUACUCUAGGCCAUGACUCUUCUUGGUCAGCCAUUGACCC 3826 Query 189 CGUCCAGGUAAGUAU 203 ||||||||||||||| Sbjct 3827 CGUCCAGGUAAGUAU 3841 >> URS0000815D40_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 1.3e+3 Identity: 56.97% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 | ||||||||||||| |||| | || ||||| | || | || || || | || ||| |||| | || Sbjct 4 GAGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACU-AGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || | | | || | |||| |||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUUCCGCCUUGUUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS0000CE1964_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 1.3e+3 Identity: 58.54% Query coverage: 40.39% Gaps: 14.63% Alignment: Query 7 AAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACG 88 |||||||||| |||||||||||| |||| | | |||| || || | || ||||| |||| Sbjct 539 AAAAUCCAAGCAGCAAAAUUUAAUAUUGAUGGG----AA------UAAU--GAGCGUCCCUCCCCACCCCCAAAUGUUGACU 608 >> URS0000D09AF1_9598 Pan troglodytes (chimpanzee) retained intron E-value: 1.3e+3 Identity: 58.54% Query coverage: 40.39% Gaps: 14.63% Alignment: Query 7 AAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACG 88 |||||||||| |||||||||||| |||| | | |||| || || | || ||||| |||| Sbjct 539 AAAAUCCAAGCAGCAAAAUUUAAUAUUGAUGGG----AA------UAAU--GAGCGUCCCUCCCCACCCCCAAAUGUUGACU 608 >> URS0002183E1A_9305 Sarcophilus harrisii (Tasmanian devil) lncRNA (ENSSHAG00000028073.1) E-value: 1.3e+3 Identity: 57.73% Query coverage: 47.78% Gaps: 8.25% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 132 || || || | || | | || | || |||| || |||| ||| | |||| ||| || || ||| ||| | Sbjct 12587 GGAGCUGCAAGG------ACACUCCCUUCUCCACAUUAGGAAGUCCUGUCUGAAAGAUGGGACGAUAGUCCCUCA--GCAUCCAGAA 12665 Query 133 AGUGCAAUGU 142 || ||||| | Sbjct 12666 AGGGCAAUCU 12675 >> URS0002357B4E_3983 Manihot esculenta (cassava) long non-coding RNA (MESC_LNC001004) E-value: 1.3e+3 Identity: 62.34% Query coverage: 33.50% Gaps: 15.58% Alignment: Query 94 UCUCCCACUUGGGGAGAUGGUAAG---------CCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCA 161 |||| | ||| || |||||||| || | ||||| || || | |||| | ||||||||| ||| Sbjct 24815 UCUCUUAUGUGGCGAAAUGGUAAGUUGCAAAUUCCUGAGCACC---CAGGUCCCAUGUUUGAUACUAGCCUAAGCCU 24888 >> URS0002351DDB_4555 Setaria italica (foxtail millet) long non-coding RNA (SITA_LNC001116) E-value: 1.4e+3 Identity: 53.46% Query coverage: 73.89% Gaps: 15.09% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 108 |||||||| ||||| | | | ||||||| | | | ||| || | | |||| | ||| |||||||| | | Sbjct 6858 CAAAAUUUCAAUUUCUAACUUAGUCAGGGGCUGGGGGGACGAGUCCG------AGUACAAUU--CGACU-----UCUCCCACCAGUCGG 6933 Query 109 GAUGG------UAAGCCAGCGCAC---CCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUU 169 || ||| || || | | | ||||| ||| | || | || || | | || || Sbjct 6934 AUUGACCCACACGAGCUGGCACAUAAGCUAUC--AUGCAAAUUGGACUACAACCCAAGUCGACUCCCAUU 7001 >> URS00007E8DD7_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 1.4e+3 Identity: 56.36% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 |||||||||| |||| |||| | || ||||| | || | || || || | || ||| |||| | || Sbjct 4 GGGCCGCGCGUACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGG-CCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || |||| ||||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCGCCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS00019E864B_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.4e+3 Identity: 68.63% Query coverage: 25.12% Gaps: 1.96% Alignment: Query 25 UUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACC 75 || ||| ||||||| |||||||| || || | |||| ||| || | Sbjct 13830 UUAUAAUAUGAAGAAAAUGCAGGGGCUCCGUGAUGGAGUACUCCCC-UAGC 13879 >> URS0002397D1F_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC006113) E-value: 1.4e+3 Identity: 53.93% Query coverage: 81.77% Gaps: 15.17% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCA---CAAAUUAUGACGUCCACUC----UCCCA 100 ||||||| | | | |||||| | || || | |||| ||| | | || | | ||| | |||||||| | || Sbjct 6833 GCAAAAUAUCAUUAUGAAGAUAUAGCUGGAUUAGUGCGAGCGCCUUCUGAUCCUUGCGGGUCUCCUUA-GGAGUCCACUCGGCCUUCCU 6920 Query 101 CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACC-----CUUCAUGAUCGGCCAUAG 184 |||| || || | ||||||| | | ||| || || || |||| | | | || ||| ||||||| Sbjct 6921 CUUGCCGAAAU---UAUCCAGCGCCUCAUCAUAGU-----------CAUGAGUCUGCGCCAGAAUCCCCCGCAUCUUGACUUGCCAUAG 6995 >> URS00024102CC_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC006113) E-value: 1.4e+3 Identity: 53.93% Query coverage: 81.77% Gaps: 15.17% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCA---CAAAUUAUGACGUCCACUC----UCCCA 100 ||||||| | | | |||||| | || || | |||| ||| | | || | | ||| | |||||||| | || Sbjct 8568 GCAAAAUAUCAUUAUGAAGAUAUAGCUGGAUUAGUGCGAGCGCCUUCUGAUCCUUGCGGGUCUCCUUA-GGAGUCCACUCGGCCUUCCU 8655 Query 101 CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACC-----CUUCAUGAUCGGCCAUAG 184 |||| || || | ||||||| | | ||| || || || |||| | | | || ||| ||||||| Sbjct 8656 CUUGCCGAAAU---UAUCCAGCGCCUCAUCAUAGU-----------CAUGAGUCUGCGCCAGAAUCCCCCGCAUCUUGACUUGCCAUAG 8730 >> URS000242B8E3_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC006113) E-value: 1.4e+3 Identity: 53.93% Query coverage: 81.77% Gaps: 15.17% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCA---CAAAUUAUGACGUCCACUC----UCCCA 100 ||||||| | | | |||||| | || || | |||| ||| | | || | | ||| | |||||||| | || Sbjct 7569 GCAAAAUAUCAUUAUGAAGAUAUAGCUGGAUUAGUGCGAGCGCCUUCUGAUCCUUGCGGGUCUCCUUA-GGAGUCCACUCGGCCUUCCU 7656 Query 101 CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACC-----CUUCAUGAUCGGCCAUAG 184 |||| || || | ||||||| | | ||| || || || |||| | | | || ||| ||||||| Sbjct 7657 CUUGCCGAAAU---UAUCCAGCGCCUCAUCAUAGU-----------CAUGAGUCUGCGCCAGAAUCCCCCGCAUCUUGACUUGCCAUAG 7731 >> URS0002627A0E_6573 Mizuhopecten yessoensis (Yesso scallop) uncharacterized LOC110464750 E-value: 1.5e+3 Identity: 64.58% Query coverage: 23.65% Gaps: 0.00% Alignment: Query 93 CUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAU 140 | || |||| ||||||||||| ||| |||| | |||| | Sbjct 1296 AUUCCCAGGUUGGAGAGAUGGUAAGAUAGCUUACCCCUCGAGUGUCAA 1343 >> URS00000E041E_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.5e+3 Identity: 52.67% Query coverage: 71.92% Gaps: 6.00% Alignment: Query 54 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUG 141 | ||| | | ||| || |||||||| ||| || | | | ||||| || | | || |||| | | ||||||| Sbjct 8 GUGAAUUCAGCCUCCCCCUGCCACAAAUCAUGCAGUGGAGUUCACCACACUUAGGAAAACC-----ACAUUGCACAUCCAGAAUGCAAUG 92 Query 142 UGGGC--CACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAA 199 | | ||| || | |||| ||||| | |||| | ||||| Sbjct 93 GUUGAGUCUUGGCCCUGGGAAACCCACCUUUGUGAUCCUGGUAUGGCCCCUGCUGGGUAA 152 >> URS000239848F_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC016265) E-value: 1.5e+3 Identity: 57.14% Query coverage: 47.29% Gaps: 6.12% Alignment: Query 14 AAGGAGCAAAAUUUAAAUUUGAAGA--AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 102 |||| || ||||| ||| | || | | | |||| | ||||| |||||||| | || | ||| | ||||| Sbjct 397 AAGGGGCUAAAUUGUAAUGCGCUGAAAAAUAGGAGGGACUGCGCGCGUAAAUACCCCCUUUUAA-GAA---AACACGCGGAUCCUCCCCUC 483 Query 103 UGGGGAG 109 |||| | Sbjct 484 UGGGUCG 490 >> URS0000465BB6_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.6e+3 Identity: 56.69% Query coverage: 72.91% Gaps: 8.92% Alignment: Query 55 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUA-AGCCAGCGCACCCACCAAGUGCAAUG 141 |||| | |||| ||||||||||| ||| ||| | || | |||||| | | || | | | | ||| ||||| Sbjct 13 UGAACACA-GCCCCUGCUACCACAAAUCAUGCAGUCACAACACCUGAAUCUGGGGAAACUACAGAGGUACCAGAUC--UAGAGUACAAUG 99 Query 142 UGGGCCACUAGCCUAGG----CCAUGAC--CCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 ||| ||||| | | ||| |||| |||||| |||| ||||| |||| | Sbjct 100 CGGGGU--GAGCCUCAGAGUGAGAAGACUGCCUUUAUGAUCAUAGUAUCUCCCCUUCCAGCUAAGCA 164 >> URS00021F556F_28377 Anolis carolinensis (green anole) lncRNA (ENSACAG00000034300.2) E-value: 1.6e+3 Identity: 67.92% Query coverage: 26.11% Gaps: 0.00% Alignment: Query 75 CACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC 127 ||| | |||| | ||| |||||| ||||||||||| | || || || Sbjct 1870 CACUAGAGAUGAGGACCAGGGUCCCACAUGGGGAGAUGGGACACCUGCCAACU 1922 >> URS0000181DC8_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.7e+3 Identity: 54.73% Query coverage: 71.92% Gaps: 5.41% Alignment: Query 55 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG 144 ||| || |||| |||||||||||| ||||| | || || ||| | || |||| | ||||||| Sbjct 14 UGAAUGCAAUUCCCCAUAACCACAAAUUAUAUAGUCCAGUUUCU-----UGGAUUAUGCUCAGGGUCAGCACAUCCGUAGUGCAACAGAU 98 Query 145 GCCACUAGCCU-AGGCCAUGACCCUUCAUGAUCG-GCCAUAGACCCCGUCCAGGUAAG 200 || || || | ||| ||||| | ||| ||| || |||||||| Sbjct 99 AAGCCUCGCUCUGGGAAAACCAUCUUGGUGAUCAUGGCAUCUUCCCUGU-CAGGUAAG 155 >> URS0000CD1D2B_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 1.7e+3 Identity: 56.92% Query coverage: 63.05% Gaps: 2.31% Alignment: Query 66 CCCCUCUACC-ACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCAC-UAG 152 | | ||| | ||| ||||| || | | || |||| | |||||| || ||| || | ||| ||| | | Sbjct 1299 CGGCGCUAUGAAGUAAUAAUGACCGCCUAUAAUAUCAUCGGUGAGA-GCCCAGCCAGUGCGCCCGUGGAGGUCUUUGUCGGCGAGGCUG 1386 Query 153 CCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 || ||||||| ||| ||| || || ||||||| | Sbjct 1387 CCCCGGCCAUGGCCCCUCAGAAUGUGCAGGUGACCCCGCUC 1427 >> URS000234F3F4_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC006670) E-value: 1.7e+3 Identity: 57.61% Query coverage: 45.32% Gaps: 11.96% Alignment: Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCC 193 ||| | || |||||||| | | ||||| |||| ||| | ||| | ||| || ||| | || | ||| Sbjct 41538 AGAGAAUUAGUAAGCGCACCGAAGAGCUGCAAAGUGGAGCACAA-----------GACUUUGCAUAAUUGGCAAACGAGCUUGUCA 41612 Query 194 AGGUAA 199 ||| || Sbjct 41613 AGGCAA 41618 >> URS00023D0747_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC006882) E-value: 1.7e+3 Identity: 55.17% Query coverage: 56.16% Gaps: 5.17% Alignment: Query 6 CAAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGC--AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU 94 |||| |||| ||| | | ||||||| | | || |||| | || || | ||| || || || || | ||| Sbjct 352 CAAAUAUUAAGGGUAAAAUUGUCAAUUUGAGGCCUAGGAGUAGGG----GGGGAUUGCUAAUCCCACCUCCCCCAUGGGAUUAGCAACACC 438 Query 95 CUCCCACUUGGGGAGAUGGUAAGCC 119 | | | |||||| ||| || | Sbjct 439 CCCAUAUUUGGGGGGAUUCGUAGUC 463 >> URS00002583EA_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.8e+3 Identity: 61.97% Query coverage: 33.99% Gaps: 2.82% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGG 113 |||| || ||| || | | ||||||||||||||| || | | ||| || ||||||| Sbjct 3 AGGGAGAGCAUGAAUGCCAUUUCUCACUACCACAAAUUAUGUAGUUGAGUUUCCUGUGUUUAGGGAGAUAA 73 >> URS0002356E62_3055 Chlamydomonas reinhardtii (C. reinhardtii) long non-coding RNA (CREI_LNC000918) E-value: 1.8e+3 Identity: 57.50% Query coverage: 58.62% Gaps: 4.17% Alignment: Query 27 UAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAA-CGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 112 ||||| | | ||| |||| || ||| ||| ||| | |||| ||| | ||||| | ||| || || ||| Sbjct 68508 UAAAUGUAAGGAAAUGGCGCUCCGAGCAGGAAUUAUGUAUCCCGCCCACCAU--UCCCUGAAGCCCACU--CGCACCUGCCGAAAUG 68590 Query 113 GUAAGCCAGCGCACCCACCAAGUGCAAUGUGGG 145 |||| | || | | || |||| |||| Sbjct 68591 CUAAGAAAUUGCUCACUGCAGCUGCACUGUGUA 68623 >> URS0001999700_64176 Podarcis muralis (common wall lizard) lncRNA (ENSPMRG00000017145.1) E-value: 1.9e+3 Identity: 56.73% Query coverage: 44.83% Gaps: 13.46% Alignment: Query 87 CGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU-------------AGCCUAGGCCAUG 163 |||| |||| || |||||| | || || |||||||||| |||| | | | | || | | ||||| | Sbjct 118 CGUCUCUCCUCCUGCUCUUUGAGAUGCU-GGCAAGAGCACCCACCAGCUGCACUUUCGCACGCUGGUUGCAAUUUCGAUACCUGGCCAGG 206 Query 164 ACCCUUCAUGAUCG 177 ||| |||||| | Sbjct 207 ACCUUUCAUGUCAG 220 >> URS00021EF64A_8049 Gadus morhua (Atlantic cod) lncRNA (ENSGMOG00000026499.1) E-value: 1.9e+3 Identity: 56.18% Query coverage: 43.84% Gaps: 2.25% Alignment: Query 95 CUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUA 183 |||| || || ||| | || | | || |||| |||| | | ||| ||||||| || | | ||||| || | Sbjct 671 UUCCCUCUCGGUCGUGUGGGCUGUCAACUUAACCUGAAAGUUCAAUAA--AACUUUGGCCCAGGCCAUAACUCAUUAUGAUUGGUUCUG 757 >> URS0000D5D8EC_9606 Homo sapiens (human) non-protein coding lnc-SMC1B-2:2 E-value: 2e+3 Identity: 53.79% Query coverage: 60.59% Gaps: 15.17% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAA---------------GUGCAAUG 141 ||| |||| | || || | |||||| || | || | || || | | | | |||| ||| |||| Sbjct 876 AACCUCAAAGGAGGAGGUACCAUCUCCCUCUGGACAAGUUUACCGGAAAAUCGGUAAAUUCCCCAAACUCAGUGUUCUCCUGUGUAAUG 964 Query 142 UGGGCCACUA---GCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 | ||| | | |||| ||| | |||||| |||| | |||| || ||| Sbjct 965 CAGCCCAUUGUGUGUGCAGGCAUCCACCAUCCAUGAUGGGCCCUUGACCUCGCCCA 1020 >> URS0000EAE84C_9606 Homo sapiens (human) HSALNT0278765 E-value: 2e+3 Identity: 53.79% Query coverage: 60.59% Gaps: 15.17% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAA---------------GUGCAAUG 141 ||| |||| | || || | |||||| || | || | || || | | | | |||| ||| |||| Sbjct 1036 AACCUCAAAGGAGGAGGUACCAUCUCCCUCUGGACAAGUUUACCGGAAAAUCGGUAAAUUCCCCAAACUCAGUGUUCUCCUGUGUAAUG 1124 Query 142 UGGGCCACUA---GCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 | ||| | | |||| ||| | |||||| |||| | |||| || ||| Sbjct 1125 CAGCCCAUUGUGUGUGCAGGCAUCCACCAUCCAUGAUGGGCCCUUGACCUCGCCCA 1180 >> URS000235C504_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004858) E-value: 2e+3 Identity: 53.97% Query coverage: 59.61% Gaps: 7.94% Alignment: Query 9 AAUCCAAGGAGCAAAAUUUAAAUUUGAAG----AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCC 91 | ||||| | |||||| | |||| || || ||| |||| ||| || ||| |||| |||| Sbjct 23325 GAAACAAGGGGAAAAAUUCAGAUUUUUAGGGGAAAAGGGCUGGGGUGUUGCGCCAGCCA-----GCGCACCCCAAAAAGGGACGCUG 23406 Query 92 ACUCUCCCACUUGGGG-AGAUGGUAAGCCAGCGCACCCA 129 | | || ||||||| ||| | | ||| | || | Sbjct 23407 AACUUUCCCCUUGGGGAAGAGCGCCUGGCAGAACGCCUA 23445 >> URS000032458F_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2e+3 Identity: 54.49% Query coverage: 75.86% Gaps: 2.56% Alignment: Query 49 GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG 136 || |||| | ||||| || |||||| ||| || | | ||| | ||||||| | | | ||| | | || Sbjct 7 AGAGCUUGAACACAGUCCCCCAAUAUUACAAAUAAUGCAGUUGAGUUUCCUGAAUUUGGGGAAGUCCCAGGAUUCAGCAUAUCUCUAAUG 96 Query 137 CAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||| | ||| | ||| | ||| |||| || |||| ||||||||||| Sbjct 97 AAAUGGAUGAGACUCACUCAGGGAAACCAACUU-GAGAUCAUGUAUC-UCCCCUGCCAGGUAAGUA 160 >> URS0000E96AF0_9606 Homo sapiens (human) HSALNT0260566 E-value: 2.1e+3 Identity: 57.89% Query coverage: 37.44% Gaps: 0.00% Alignment: Query 6 CAAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAU 81 ||| |||| ||||| || |||| | | ||| |||| | | | | | || |||||| | || | Sbjct 453 UGAAAGCCAAAUUUAAAAAUAAAAUGUUGAGGGAGGGGCCGGGGUCCCUGGGAAGGGUCCCCCCUUCUCUGCAUCU 528 >> URS00009BB7B5_10090 Mus musculus long non-coding RNA NONMMUT134379.1 E-value: 2.1e+3 Identity: 55.77% Query coverage: 51.23% Gaps: 4.81% Alignment: Query 58 ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGG 145 || || | | | | ||| || |||| |||||| || || ||| | | || | | | | ||| |||||||| Sbjct 1553 ACCCGAAUGCACACGCAUACACAUCAUGAAUUCCACUUUCUCAU-----GAGUUAGAUUUCCCGUGAAGAGCGCUUGUGGAAUGUGGG 1635 Query 146 CCACUAGCCUAGGCCA 161 | | |||| | | | Sbjct 1636 GAAUUUGCCUUGCCAA 1651 >> URS00009C0979_10090 Mus musculus long non-coding RNA NONMMUT134380.1 E-value: 2.1e+3 Identity: 55.77% Query coverage: 51.23% Gaps: 4.81% Alignment: Query 58 ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGG 145 || || | | | | ||| || |||| |||||| || || ||| | | || | | | | ||| |||||||| Sbjct 1406 ACCCGAAUGCACACGCAUACACAUCAUGAAUUCCACUUUCUCAU-----GAGUUAGAUUUCCCGUGAAGAGCGCUUGUGGAAUGUGGG 1488 Query 146 CCACUAGCCUAGGCCA 161 | | |||| | | | Sbjct 1489 GAAUUUGCCUUGCCAA 1504 >> URS00009C1848_10090 Mus musculus long non-coding RNA NONMMUT134378.1 E-value: 2.1e+3 Identity: 55.77% Query coverage: 51.23% Gaps: 4.81% Alignment: Query 58 ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGG 145 || || | | | | ||| || |||| |||||| || || ||| | | || | | | | ||| |||||||| Sbjct 1380 ACCCGAAUGCACACGCAUACACAUCAUGAAUUCCACUUUCUCAU-----GAGUUAGAUUUCCCGUGAAGAGCGCUUGUGGAAUGUGGG 1462 Query 146 CCACUAGCCUAGGCCA 161 | | |||| | | | Sbjct 1463 GAAUUUGCCUUGCCAA 1478 >> URS000056B917_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.2e+3 Identity: 55.00% Query coverage: 67.49% Gaps: 2.86% Alignment: Query 64 ACCCCCUCUACCACAAAUUAUGACGUCC-ACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUG--UGGGCCACU 150 |||| || |||||||| || | | | |||| || |||| || | | | |||| ||||| ||| || ||| | Sbjct 20 UCCCCUAUUAUCACAAAUUCUGUAGCUGAAUUUUCCCUGUUUGGGAAAUAGCAGGGGUCAGCACAUCCCAAGGUUCAUGGUUGAGCCUCC 109 Query 151 AGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 || || | ||| | |||| |||| |||| |||| Sbjct 110 CA-CUGGGAAAAUCACCUCCUUGAUUAUGGUGUCUCCCCUGCCAGAUAAG 158 >> URS0000C61779_1794912 Anaerosporomusa subterranea Bacterial small subunit ribosomal RNA E-value: 2.2e+3 Identity: 57.61% Query coverage: 45.32% Gaps: 10.87% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 106 |||| ||| ||| | ||| | | | |||| | ||| | |||| || | || ||||| | | | || | |||| Sbjct 186 GCAAGAUUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGUGCCGCAGUUAACACAAUA----------AGUAUUCCGCCUGGG 263 Query 107 GAGA 110 ||| Sbjct 264 GAGU 267 >> URS0000EFA4F7_5851 Plasmodium knowlesi strain H snRNA U1 E-value: 2.2e+3 Identity: 56.92% Query coverage: 63.05% Gaps: 1.54% Alignment: Query 74 CCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCA-CCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAU 162 || ||||| || || | || ||| ||| || || || | || || | ||||||||| | | ||| |||| Sbjct 32 GCAAAAAUUUUGCUGUUAGCACCUUCCAUGUGGAAAGUCUAUAGCUCAUCACAGUCAGCUGAGUGCAAUGCUCUGCUCCGAACUACGCCAG 122 Query 163 GACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | ||| ||| | || | || | |||||||||| Sbjct 123 GGUAAUUCGUGAGCUACCCCAAACGACAGCCAGGUAAGU 161 >> URS000261D9C3_2607531 Octopus sinensis (East Asian common octopus) protocadherin-18, transcript variant X3 E-value: 2.2e+3 Identity: 59.18% Query coverage: 47.78% Gaps: 3.06% Alignment: Query 61 CGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGU-AAGCCAGCGCACCCACCAAGUGCAAUGUGGG 145 | | |||| ||| || | | || ||| ||| | |||| | |||||| ||| ||| | || || | ||| | Sbjct 3329 UUUGGCGCCUCAACCGGAAGUGACAACCUCCCCUCCACUACUUCGUGAGAUGUGGAAGGUG--ACACAAAGCACAUGAAGUGUCGA 3412 Query 146 CCACUAGCCUAG 157 |||||| ||| Sbjct 3413 CCACUAUAUUAG 3424 >> URS00008B62A5_9606 Homo sapiens (human) non-protein coding lnc-RAB6C-9:1 E-value: 2.3e+3 Identity: 54.35% Query coverage: 45.32% Gaps: 0.00% Alignment: Query 86 ACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUC 176 | ||| || || | | | | | ||||| ||| || | || | ||||| | || || | |||||| | ||| | Sbjct 57 AUGUCUACCCUGGCCAGUCUGUAAUAAGACAGCCAACGCCCCUUUCUGGUACUAUGUGUGUCAUCAGACAAGGCCAAGUAGGGACAUUACU 147 Query 177 G 177 | Sbjct 148 G 148 >> URS0000019FDB_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.3e+3 Identity: 52.98% Query coverage: 73.40% Gaps: 5.96% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUG 141 | | |||| | | ||| |||||||| | ||| || || ||| ||| |||| | | |||| ||| || ||| Sbjct 8 GUGUGAACACAGUCUCCCACUACCACAUAC---GAC---UUUUC-UACAUUUGAGGAAAUGGCAGGAGUCAGCACAUGACAAAUGGGAUG 90 Query 142 --UGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 || || | | || || ||| ||||| | || ||||| ||| Sbjct 91 GAUGAGCUUCAUUCUGAGAAAGCCACUUUUCCUGAUCAAGGUGUCUCUCCUGCCAGGCAAG 151 >> URS0001A0DF0E_9995 Marmota monax (woodchuck) non-coding RNA E-value: 2.3e+3 Identity: 55.28% Query coverage: 55.17% Gaps: 9.76% Alignment: Query 69 CUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU-----------GCAAUGUGGGCCA 148 || | | || |||| | ||| ||||| | | || | | || || |||||| || | ||| ||||| Sbjct 132 CUUUUAGUGAUCUUGUGACAUGCACCUUCCCAGAUCAGUAGCUUGAGAGGCAUGGCACCCUCCCUGACCUUGCAGGCCGCAGCCCAGGCCA 222 Query 149 CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCC 180 | | || ||||| ||| || | ||| |||| Sbjct 223 CCAACC-AGGCCCUGAUCCGCCGUGACUGGCC 253 >> URS000236288E_88036 Selaginella moellendorffii (S. moellendorffii) long non-coding RNA (SMOE_LNC000321) E-value: 2.3e+3 Identity: 61.11% Query coverage: 34.98% Gaps: 16.67% Alignment: Query 37 GAAUUGGCAGGGGCCGCGCGAACGCGUACCC-CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 ||||| ||| ||||| ||| | || ||| ||| || ||||||||||| ||| | || Sbjct 72669 GAAUU-----------UGCGUACGCGAGCCCUCAACUUCCAAAAACUACGACGUCCACUCCUCCAGACGCGG 72729 >> URS000240B169_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC005889) E-value: 2.3e+3 Identity: 72.97% Query coverage: 18.23% Gaps: 0.00% Alignment: Query 31 UUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCC 67 | ||| | ||||| | |||||||||||||||| Sbjct 1838 UAAGAAAACUUGGCCAAAGUCGCGCGAACGCGUACCU 1874 >> URS0001CC57A1_410658 soil metagenome partial contains 5.8S ribosomal RNA, internal transcribed spacer 2, and large subunit ribosomal RNA E-value: 2.4e+3 Identity: 53.98% Query coverage: 51.72% Gaps: 9.73% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCA 138 ||| | | ||| | | | || ||||||| || | | | | || |||| ||| |||| | | ||| | | || ||| Sbjct 97 CCGAGGGCACGUCUGC-CUGAGUAUCACAAAUCAUCAUA--CCCCCAUCCUCUUGAGGAUAUGGGACGGAAGCUGAUCUCCCGUGUGUU 182 Query 139 AU--------GUGGGCCACUAGCC 154 | || ||||| | | Sbjct 183 ACCGCAUGCGGUUGGCCAAAAUCU 206 >> URS0002357501_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCU 155 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 2740 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAG 2828 Query 156 AGGCCAUGACCCUUC 170 | ||| ||| | Sbjct 2829 GUGAUCUGAACCUCC 2843 >> URS0002366B82_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 224 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 314 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 315 GAUCUGAACCUCC 327 >> URS00023723FE_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 295 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 385 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 386 GAUCUGAACCUCC 398 >> URS0002377368_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 174 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 264 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 265 GAUCUGAACCUCC 277 >> URS0002377C95_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 293 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 383 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 384 GAUCUGAACCUCC 396 >> URS000237AE99_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCU 155 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 3821 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAG 3909 Query 156 AGGCCAUGACCCUUC 170 | ||| ||| | Sbjct 3910 GUGAUCUGAACCUCC 3924 >> URS000238BC33_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 291 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 381 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 382 GAUCUGAACCUCC 394 >> URS00023902C8_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 291 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 381 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 382 GAUCUGAACCUCC 394 >> URS000239278B_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 24963 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAU 25049 Query 154 CUAGGCCAUGACCCUUC 170 | ||| ||| | Sbjct 25050 AGGUGAUCUGAACCUCC 25066 >> URS00023AF099_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 195 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 285 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 286 GAUCUGAACCUCC 298 >> URS0000597466_7264 Drosophila buzzatii U1 snRNA E-value: 2.7e+3 Identity: 56.55% Query coverage: 77.34% Gaps: 10.12% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA--GAUGGU--AAGCCAGCGCACCCACCA 132 ||| | |||||||||| ||| |||||| |||||| | | | ||| | ||| || | | | || | || || | Sbjct 3 GGGACGGCGCGAACGCCAUUCCCGGCUACCAAAAAUUACACGCACGAGUUAUUCACAUUAGGAAUAAUCGCAGAGGUCAACUCAGCCG-AA 92 Query 133 AGUGCAAUGUGGGCCACUAGCCUAGGCCAUGA------CCCUUCAUGAUCGGCCAUAGACCCC-GUCCAGGUAAGUA 202 ||||||||| | ||||| | || ||||| ||||| || | | ||||||||||| Sbjct 93 AGUGCAAUGAC-----CAAGCCUCACUCCGGAGGAACCGCCUUCGUGAUCACGGUUAACCUCUACGCCAGGUAAGUA 164 >> URS000197B4B1_9544 Macaca mulatta (Macaque) lncRNA (ENSMMUG00000061998.1) E-value: 9.2e+3 Identity: 58.06% Query coverage: 45.81% Gaps: 2.15% Alignment: Query 76 ACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGA 164 ||||| |||| ||| | | | ||| | | ||| ||| | | |||||||| ||||||| | ||| || | | Sbjct 2703 ACAAAAACUGACCUCCCG-CCAUCGCGAGGGAAUGCUGCCAGCAGGCGACCUUCCAAAGUGCAACGUGGGCCC-UUCCCUGGGUCUCCA 2789 Query 165 CCCU 168 ||| Sbjct 2790 GCCU 2793 >> URS0001981247_10090 Mus musculus predicted gene 16174 (Gm16174) E-value: 5.2e+3 Identity: 67.31% Query coverage: 25.62% Gaps: 9.62% Alignment: Query 84 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 || |||||||| ||| | ||||||| || | || || | |||||| Sbjct 35 AAACUUCCACUCUUCCAAUGGGGGAGAAGGGAGGC-AGAAC----CCCAAGU 81 >> URS000196C639_9544 Macaca mulatta (Macaque) lncRNA (ENSMMUG00000063878.1) E-value: 3.8e+3 Identity: 61.90% Query coverage: 39.41% Gaps: 5.95% Alignment: Query 31 UUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAA----UUAUGACGUCCACUCUCCCACUUGGGGAGA 110 | ||| || ||| | || | | |||| || |||||| ||| | ||||||| ||| || | |||| ||||| Sbjct 2181 UAUGAGGAGUUGAUAC-CUCCACACACACGCAUAUCCCCUCCACCUUGGACUCCUUAUGACCACCAAUCCCUCACUAAGGGAGG 2263 >> URS000196F325_9544 Macaca mulatta (Macaque) lncRNA (ENSMMUG00000061998.1) E-value: 9.2e+3 Identity: 58.06% Query coverage: 45.81% Gaps: 2.15% Alignment: Query 76 ACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGA 164 ||||| |||| ||| | | | ||| | | ||| ||| | | |||||||| ||||||| | ||| || | | Sbjct 2841 ACAAAAACUGACCUCCCG-CCAUCGCGAGGGAAUGCUGCCAGCAGGCGACCUUCCAAAGUGCAACGUGGGCCC-UUCCCUGGGUCUCCA 2927 Query 165 CCCU 168 ||| Sbjct 2928 GCCU 2931 >> URS0001A17C7C_9258 Ornithorhynchus anatinus (platypus) lncRNA (ENSOANG00000036865.1) E-value: 6.8e+3 Identity: 72.34% Query coverage: 23.15% Gaps: 0.00% Alignment: Query 6 CAAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCG 52 | ||| |||||||| ||| | | |||| | |||| |||||| || Sbjct 731 CUGAAUUCAAGGAGCCAAAAUAAUAUUUUAGAAAUUAGCAGGGCCCA 777 >> URS00005A8CA8_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.5e+3 Identity: 56.34% Query coverage: 68.97% Gaps: 2.11% Alignment: Query 62 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCAC 149 || ||||| | | ||||| |||| | | | | |||||| ||||||| | | | ||| |||| |||| | Sbjct 13 GUUCCCCCAUUGCUACAAA-UAUGCAGCCAAGUUUCCCACAUUUGGGGAAACCUCAGAGGAUAGCAGAACUGGAGUGGAAUGAUAAGCCU 101 Query 150 UAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | |||||| | ||| | ||||| |||| ||| |||||| Sbjct 102 UGUCCUAGGAAAACUGCCUACGUGAUCAUGGUAUUUCCCCUGCCAAGUAAGU 153 >> URS000197A6E6_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005010172.1) E-value: 5.3e+3 Identity: 53.37% Query coverage: 76.35% Gaps: 12.92% Alignment: Query 8 AAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAU---UGGCAGGG--GCCGCGCGAACGCGUACCCCCUCUACCACA--AAUUAUGACGU 89 | | ||||||| || |||| ||||| ||| | | |||| | | || || | | || | | | ||| || |||| Sbjct 972 ACACACAAGGAGGAAGAUUUCAAUUUAAAGUCUGUCUUACAGGACAGACAAGCUAAUGAGCACUACUGCCCCUACACCCGCAAUCACGU 1060 Query 90 CCAC-------UCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCA-------CCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAU 162 |||| ||||| || | ||| | ||||| ||| | | | || || || || || ||| |||| Sbjct 1061 CCACCGUGUAGGCUCCCAAACACGACGAGGAAGGAAGCCGAGGCAGAGCCGAACAGCUCCCUUCAGUGGGGACCGCUGGCCAGUGCCAC 1149 >> URS000196680F_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005009924.1) E-value: 2.5e+3 Identity: 56.25% Query coverage: 39.41% Gaps: 1.25% Alignment: Query 26 UUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 105 || ||||| | || ||| ||| | | | | ||| ||| | | ||| || || |||| || || || Sbjct 517 AAAAGUUUGACGCAUGAAACAAGGCA-GUUGAAGGUGAUCGCUCUCCACCUCUAGCCAUGGCGACCUCUCUUCCUCUGGG 595 >> URS00023D1955_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC028889) E-value: 3.9e+3 Identity: 68.57% Query coverage: 17.24% Gaps: 0.00% Alignment: Query 29 AAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU 63 | |||||| ||| || |||||||| || || Sbjct 2727 AUUUUGAAAAAUCGGGAGGGGCCGUGCAAAUUUCA 2761 >> URS00023EC175_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005339) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 219320 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 219383 >> URS0002405DB4_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 291 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 381 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 382 GAUCUGAACCUCC 394 >> URS000236E9DE_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC008009) E-value: 3.7e+3 Identity: 65.57% Query coverage: 29.06% Gaps: 3.28% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAA 80 || ||||| |||||||| ||| ||| || || ||| | || | || | ||||| Sbjct 18438 GAAGUUAAAAUUGAAGAACUGGUAGGAUCCCUGCAAACUUAUGAACUCACUGUCACACAAC 18498 >> URS0002380228_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005337) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 292254 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 292317 >> URS00023EE17F_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC004860) E-value: 4.8e+1 Identity: 69.57% Query coverage: 33.99% Gaps: 1.45% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGU 114 || | | || ||| | | |||| | || || ||| ||| | |||| || ||||||||||||| || Sbjct 26452 GGAGGCACGUGAAUGAAUGCCCCUUUUAUCAGAAAAUAUUAAAUCCAU-UUCACACUUGGGGAGAUAGU 26519 >> URS00023F2833_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005336) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 29193 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 29256 >> URS0002863980_9913 Bos taurus (cattle) lncRNA (ENSBTAG00000056418.1) E-value: 3.2e+3 Identity: 64.18% Query coverage: 31.53% Gaps: 4.48% Alignment: Query 64 ACCCCCUCUACCACAAAUUAUGAC---GUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC 127 || |||||| | | || |||| | | || ||||| | ||||| |||| |||| |||| Sbjct 284 ACACCCUCUGUCUCUUUUUGUGACACUGACAUCUUUCCCAUUCGGGGAUAUGGGAAGCUGGCGCUAG 350 >> URS000236500B_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC001238) E-value: 3.2e+3 Identity: 54.62% Query coverage: 58.62% Gaps: 8.46% Alignment: Query 10 AUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCC------GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC 90 || | ||| |||| ||| | || | | ||| |||||| | || | | ||| | | ||| ||| Sbjct 62635 CUCGACGGACUCAAAUAUAAUUAUGUAAUAAUGGAAGGGGCAAAUAUGUAAUAAGCGAGGAGCCCUUAUUCCAUAAAAGGGACUCCU 62721 Query 91 CACUCUCCCACUUGGGGAGA-----UGGUAAGCCAGCGCACCC 128 ||| ||| || | |||||| | |||||| | ||||| Sbjct 62722 CACCCUCACAAUAGGGGAGGCCAAUUCCUAAGCCUUCUCACCC 62764 >> URS0002863182_9913 Bos taurus (cattle) lncRNA (ENSBTAG00000056418.1) E-value: 3.2e+3 Identity: 64.18% Query coverage: 31.53% Gaps: 4.48% Alignment: Query 64 ACCCCCUCUACCACAAAUUAUGAC---GUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC 127 || |||||| | | || |||| | | || ||||| | ||||| |||| |||| |||| Sbjct 305 ACACCCUCUGUCUCUUUUUGUGACACUGACAUCUUUCCCAUUCGGGGAUAUGGGAAGCUGGCGCUAG 371 >> URS000286647F_9940 Ovis aries (sheep) lncRNA (ENSOARG00020027531.1) E-value: 3.5e+3 Identity: 69.05% Query coverage: 20.69% Gaps: 0.00% Alignment: Query 88 GUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCA 129 | | || ||||||| ||||| |||| ||||| | | || Sbjct 325 GACAUCUUUCCCACUCGGGGAUAUGGGAAGCCGGUUCUACCG 366 >> URS0002375FE3_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC004706) E-value: 4.5e+3 Identity: 71.43% Query coverage: 20.69% Gaps: 0.00% Alignment: Query 80 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAG 121 |||||| || | || | ||| |||||||||||| || | Sbjct 18021 AUUAUGUCGACUACAAUUCCAAUUGGGGAGAUGGCUAGUCUU 18062 >> URS000195E89F_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000042427.1) E-value: 2.5e+3 Identity: 61.76% Query coverage: 32.51% Gaps: 2.94% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAG 117 | ||| | ||||| || ||||||||||| ||| | | || || ||| || || | | | Sbjct 348 GUUUGAAUGAAGUCCCCCACUGUCACAAAUUAUGCAGUCAAGUUUCUGGCAUUUGCAGAAAUCGCAGG 415 >> URS0000801356_338471 Ronderosia bergi partial U1 E-value: 3.7e+3 Identity: 58.04% Query coverage: 53.69% Gaps: 2.68% Alignment: Query 67 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 || |||||| |||||||| | | | ||||| | |||| || | | | || | | |||||||||| | || | Sbjct 6 CCGGCUACCAAAAAUUAUGCGCCCGAGUUACCCACAUUAGGGGUAAUCGCAGGGGUCAGCUCGAUCGAAGUGCAAUGAAAGAGCCUCAC 94 Query 154 C-UAGGCCAUGACCCUUCAUGAU 175 | | | | ||||| |||| Sbjct 95 CCUGGAGGAACCGCCUUCGUGAU 117 >> URS00009BF3E7_10090 Mus musculus long non-coding RNA NONMMUT124781.1 E-value: 4.8e+3 Identity: 66.67% Query coverage: 25.12% Gaps: 9.80% Alignment: Query 84 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 || |||||||| ||| | ||||||| || | || || | ||||| Sbjct 66 AAACUUCCACUCUUCCAAUGGGGGAGAAGGGAGGC-AGAAC----CCCAAG 111 >> URS00023804DB_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC009858) E-value: 6.1e+3 Identity: 65.52% Query coverage: 28.57% Gaps: 10.34% Alignment: Query 104 GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCA 161 ||||||| | | || | | ||| ||| |||||||||| ||| ||||| | Sbjct 26560 GGGGAGAGAGAA----UUCGGA--CCCCAUGUGUGAUGUGGGCCAAUAGGAUAGGCUA 26611 >> URS000240A682_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005340) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 220595 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 220658 >> URS000240B6E2_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 319 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 409 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 410 GAUCUGAACCUCC 422 >> URS000241395E_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC043726) E-value: 2.8e+3 Identity: 59.46% Query coverage: 33.50% Gaps: 8.11% Alignment: Query 74 CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG------CAAUG 141 | ||||| || | |||||| |||| || | ||| || |||||| | | || | || |||| Sbjct 12391 CUACAAAAGAUCCGGCCCACUCGUUCACUGGGCGGCAUGUUAGGCCAGCCCUCUGACUUAUUGGGAAACCAAUA 12464 >> URS000238B82E_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005340) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 220594 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 220657 >> URS000236CE57_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC002209) E-value: 8e+3 Identity: 53.33% Query coverage: 71.92% Gaps: 14.00% Alignment: Query 17 GAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 102 || || ||||| |||| || | || | | ||| || | | | || | |||||| | | ||| + || Sbjct 43302 GACCAGAAUUUUGUUUUG---GAUGGACAAGUGGUGCGAUAAUGAGGCC-----CUUUCUCAAAUUUUCCC--CCAGCUGUUUACG 43377 Query 103 U----GGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAU 162 | ||| | || | |||| | ||||| | |||||| | ||||| | || || Sbjct 43378 UUGGCGGGUAAUAGGAAUGCCAA-------AGUAAGUGAAGUGUGGGACUCUAGCUUGGGUCAA 43434 >> URS000240104D_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCU 155 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 3402 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAG 3490 Query 156 AGGCCAUGACCCUUC 170 | ||| ||| | Sbjct 3491 GUGAUCUGAACCUCC 3505 >> URS0002405845_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC003449) E-value: 8.2e+3 Identity: 58.33% Query coverage: 45.32% Gaps: 13.54% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 | | |||||| | | || || | |||| || | | || | |||| | ||||| | |||||| | ||||| Sbjct 63537 UUUCUCAAAUUUUC-CCUCAGCUGUU-UACUUUGGCGGGUCAUAGGAAUGCCAA-------AGUAAGUGAAGUGUGGGACUCUAGC 63613 Query 154 CUAGGCCAUG 163 || || || | Sbjct 63614 CUGGGUCAAG 63623 >> URS00001B9E97_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.9e+3 Identity: 54.61% Query coverage: 67.98% Gaps: 10.64% Alignment: Query 65 CCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAG 152 ||| ||| ||||||| ||| || | | || || ||||||| || | | | || || || ||| ||| | Sbjct 21 UUCCCACUAACACAAAUGAUGCAGUUGAGUUUCUUGCAUUUGGGGAAAUCACAGGG-------CUCAGCAGAUG---GGUGAGCCU--CG 98 Query 153 C-CUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 | || || | ||||| || || || | ||||| ||||| Sbjct 99 CCCUGGGAAAACUACCUUCCUGUUCAUGAUGUCUCCUCUACCAGGGAAGUA 149 >> URS000241CD28_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC001214) E-value: 4e+3 Identity: 58.67% Query coverage: 36.95% Gaps: 0.00% Alignment: Query 30 AUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 104 || | || |+ ||| | | ||| ||||| || | | |||| | ||| || ||| ||||| ||| Sbjct 16985 AUGUACAGGACAGGCGUGAGUCGCCGGAACGAAUAUCUUCGCUACUAGAAAAAGUGGCGUAAUCUCUCAGUUUUG 17059 >> URS00025C613C_175245 uncultured fungus partial contains 5.8S ribosomal RNA, internal transcribed spacer 2, and large subunit ribosomal RNA E-value: 4.1e+3 Identity: 56.41% Query coverage: 54.68% Gaps: 5.13% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA-----CUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 | | ||| || |||||||| ||| | ||| | |||| ||| ||| || | ||| || || |||| | | || Sbjct 43 CUGAGCGUCAGCAAACCCCCUCAACCGAACAUUUUUUUGUCCUGGUUGGUCUUGGGCUUUGGAGGCUGGGAAACCUGCGCCUGCCCUAA 131 Query 134 GUGCAAUGU-GGGCCACUAGCCUAGGCC 160 || | || ||||||| ||| Sbjct 132 ACUUGCUGCACGACCGCUAGCCUCGGCU 159 >> URS000256A05B_9606 Homo sapiens (human) non-coding RNA E-value: 4.3e+3 Identity: 55.42% Query coverage: 38.92% Gaps: 8.43% Alignment: Query 69 CUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCC 147 || | | ||||| ||| | |||||| ||||| || || || |||| ||| || | | ||||| Sbjct 100 CUGCAUUGCCUGUUAUGCUGUCAAACCUCCCAUUUGGGCAGGCCUGAGGAGAGACAGCUCACUCAGUAUCAG---CUUGGGCA 179 >> URS000241F566_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC004860) E-value: 4.8e+1 Identity: 69.57% Query coverage: 33.99% Gaps: 1.45% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGU 114 || | | || ||| | | |||| | || || ||| ||| | |||| || ||||||||||||| || Sbjct 26453 GGAGGCACGUGAAUGAAUGCCCCUUUUAUCAGAAAAUAUUAAAUCCAU-UUCACACUUGGGGAGAUAGU 26520 >> URS000241FBFF_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC003449) E-value: 8.2e+3 Identity: 58.33% Query coverage: 45.32% Gaps: 13.54% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 | | |||||| | | || || | |||| || | | || | |||| | ||||| | |||||| | ||||| Sbjct 63526 UUUCUCAAAUUUUC-CCUCAGCUGUU-UACUUUGGCGGGUCAUAGGAAUGCCAA-------AGUAAGUGAAGUGUGGGACUCUAGC 63602 Query 154 CUAGGCCAUG 163 || || || | Sbjct 63603 CUGGGUCAAG 63612 >> URS00023A03BA_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC025545) E-value: 5.7e+3 Identity: 63.10% Query coverage: 39.90% Gaps: 3.57% Alignment: Query 68 CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACC---CACCAAGUGCAAUGUGGGCCA 148 ||| | ||||| || | | |||| | || || || || | |||| ||||| |||||||| || || ||| || Sbjct 10155 CCUGGAACACAAUGCAUUCCAUUAACUCGCGGACGCGGCGAUAUCGCCGGCCACGGCACCAAUCACCAAGUACAUUGGGGGGCA 10238 >> URS00023920EA_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC013490) E-value: 7.1e+3 Identity: 62.34% Query coverage: 37.44% Gaps: 5.19% Alignment: Query 15 AGGAGCAAAAUUUAAAUUUGAAGAAUUG-GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC 90 | | ||||| ||| |||||| | | ||| || ||||| || | ||||| ||| ||| | ||| || Sbjct 47151 ACGGGCAAAUUUUUAAUUUGCAUAUUUGGGCUCGGGCCUAUCGGAUCGAACCCCCCACUAACACCAU---AGACAUC 47224 >> URS000242003E_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC012604) E-value: 3.2e+3 Identity: 56.32% Query coverage: 42.86% Gaps: 6.90% Alignment: Query 30 AUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGU 114 | ||| | |||| | | ||| | |||||| || | | ||| |||| | |||||||||| ||||| Sbjct 155438 ACUUGGGGCCUUGGUCGUGUCCGAACCAACGCGACACCUUUUGA------UAGGCGACAACCACCAUAUCACUUGGGGACAUGGU 155516 Query 115 AA 116 | Sbjct 155517 CA 155518 >> URS00001551AC_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.1e+3 Identity: 58.21% Query coverage: 33.00% Gaps: 7.46% Alignment: Query 64 ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCAC 130 ||||| |||||||| ||| || || | | ||| | | ||| || || | | ||| Sbjct 24 CCCCCCACUACCACAGAUUUUGCGGUUAAAUUUCCUUCAUUGGGG-----AAAAUCACAGGAGUCAC 85 >> URS00009B78EE_9606 Homo sapiens long non-coding RNA NONHSAT148416.1 E-value: 7.3e+3 Identity: 63.08% Query coverage: 32.02% Gaps: 7.69% Alignment: Query 82 UAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGC 146 | ||| | |||| |||| || ||| |||| ||| | || |||| |||| || ||| Sbjct 4973 AAGGACUUUCACUUUCCCCCUACAGGAAAUGGGAAGUCGGCCAGCCCA-----GGCAAGGUUGGC 5032 >> URS0000EF6B19_9606 Homo sapiens (human) novel transcript E-value: 4.5e+3 Identity: 56.10% Query coverage: 38.42% Gaps: 8.54% Alignment: Query 69 CUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGC 146 || | | ||||| ||| | |||||| ||||| || || || |||| ||| || | | ||||| Sbjct 100 CUGCAUUGCCUGUUAUGCUGUCAAACCUCCCAUUUGGGCAGGCCUGAGGAGAGACAGCUCACUCAGUAUCAG---CUUGGGC 178 >> URS00021BECCA_158383 Olea europaea subsp. europaea non-coding RNA E-value: 5.8e+3 Identity: 65.57% Query coverage: 29.06% Gaps: 3.28% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAA 80 || ||||| |||||||| ||| ||| || || ||| | || | || | ||||| Sbjct 3956 GAAGUUAAAAUUGAAGAACUGGUAGGAUCCUUGCAAACUUAUGAACUCACUGUCACACAAC 4016 >> URS00008C1463_9606 Homo sapiens (human) non-protein coding lnc-CLBA1-4:1 E-value: 6.9e+3 Identity: 64.52% Query coverage: 30.54% Gaps: 0.00% Alignment: Query 106 GGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCC 167 | || | | |||||| | |||||||||| | | |||| || | | ||| |||| | Sbjct 107 GUAGUCAGGAUGCCAGCUCCCCCACCAAGUCAACUUUGGGGAGCUUGGCAGAGCCGUGACUC 168 >> URS00009BD52F_9606 Homo sapiens long non-coding RNA NONHSAT183033.1 E-value: 6.7e+3 Identity: 69.39% Query coverage: 24.14% Gaps: 0.00% Alignment: Query 152 GCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 ||||||||| |||||||| | || ||||| | | | ||||| | Sbjct 25562 UCCUAGGCCAAGACCCUUCUUACUCAGCCAUUGUCUCAUCUCAGGUUAU 25610 >> URS0002338E16_9606 Homo sapiens (human) HSALNT0302979 E-value: 8.3e+3 Identity: 59.49% Query coverage: 38.92% Gaps: 0.00% Alignment: Query 71 CUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCAC 149 | |||| | || |||| || | | | | ||||| |||| | || || || | | ||||| | | |||| Sbjct 122 CAACCAGAUAUGCUGACCCUCAUCCCCUACCCUCAGGAGAAGGUAUGACAUAGCUCCACCUACAUGCAAGGGGAGCCAG 200 >> URS00009BBF70_10090 Mus musculus long non-coding RNA NONMMUT099683.1 E-value: 2.7e+3 Identity: 64.20% Query coverage: 39.41% Gaps: 18.52% Alignment: Query 62 GUAC-CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUG 141 |||| || | |||||||||||||||| ||| | | | | | ||| | |||| |||| |||| |||| | Sbjct 179 GUACUCCUCACUACCACAAAUUAUGAAGUCAAAUUUAC---UCAGGG---------GUCAGCACACC--CCAAAUGCACAG 245 >> URS00023B34A5_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC001929) E-value: 3.3e+3 Identity: 87.88% Query coverage: 16.26% Gaps: 0.00% Alignment: Query 171 AUGAUCGGCCAUAGACCCCGUCCAGGUAAGUAU 203 |||||| |||| |||||||||| ||||||||| Sbjct 4 UUGAUCGCCCAUCGACCCCGUCCGGGUAAGUAU 36 >> URS000233B305_9606 Homo sapiens (human) HSALNT0302971 E-value: 8.3e+3 Identity: 59.49% Query coverage: 38.92% Gaps: 0.00% Alignment: Query 71 CUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCAC 149 | |||| | || |||| || | | | | ||||| |||| | || || || | | ||||| | | |||| Sbjct 1761 CAACCAGAUAUGCUGACCCUCAUCCCCUACCCUCAGGAGAAGGUAUGACAUAGCUCCACCUACAUGCAAGGGGAGCCAG 1839 >> URS00009B0118_10090 Mus musculus long non-coding RNA NONMMUT127662.1 E-value: 3.7e+3 Identity: 60.26% Query coverage: 36.45% Gaps: 5.13% Alignment: Query 101 CUUGGGG----AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 ||||| | | ||||| | | | || |||||||| || | || || || | ||||| || | ||| | Sbjct 84 CUUGGUGACGUAUGUGGUAGGUCUGUGCUGCCACCAAGGGCCAAGUUGGUGACCACAGCAGGCCUUGUGCUGCCAUCA 161 >> URS00027EC95E_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015030056.1) E-value: 4.5e+3 Identity: 62.12% Query coverage: 31.53% Gaps: 3.03% Alignment: Query 122 CGCACCCACCAAGUGCAAUGUGGGCCA--CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGA 185 || | ||||| |||| ||||||| ||| ||| | | | | | || | ||| ||| | | Sbjct 10105 UGCCCAGACCAAAUGCAGUGUGGGCAUGCUUAGUCUAUGGCCUCAACAUUUAAGAUAGGCUGUUGU 10170 >> URS00027F2E0C_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015030056.1) E-value: 4.5e+3 Identity: 62.12% Query coverage: 31.53% Gaps: 3.03% Alignment: Query 122 CGCACCCACCAAGUGCAAUGUGGGCCA--CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGA 185 || | ||||| |||| ||||||| ||| ||| | | | | | || | ||| ||| | | Sbjct 8250 UGCCCAGACCAAAUGCAGUGUGGGCAUGCUUAGUCUAUGGCCUCAACAUUUAAGAUAGGCUGUUGU 8315 >> URS00023D8F11_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC001215) E-value: 4e+3 Identity: 58.67% Query coverage: 36.95% Gaps: 0.00% Alignment: Query 30 AUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 104 || | || |+ ||| | | ||| ||||| || | | |||| | ||| || ||| ||||| ||| Sbjct 6203 AUGUACAGGACAGGCGUGAGUCGCCGGAACGAAUAUCUUCGCUACUAGAAAAAGUGGCGUAAUCUCUCAGUUUUG 6277 >> URS00027EFFF6_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015030056.1) E-value: 4.5e+3 Identity: 62.12% Query coverage: 31.53% Gaps: 3.03% Alignment: Query 122 CGCACCCACCAAGUGCAAUGUGGGCCA--CUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGA 185 || | ||||| |||| ||||||| ||| ||| | | | | | || | ||| ||| | | Sbjct 13089 UGCCCAGACCAAAUGCAGUGUGGGCAUGCUUAGUCUAUGGCCUCAACAUUUAAGAUAGGCUGUUGU 13154 >> URS00023D8BD4_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC003449) E-value: 8.2e+3 Identity: 58.33% Query coverage: 45.32% Gaps: 13.54% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 | | |||||| | | || || | |||| || | | || | |||| | ||||| | |||||| | ||||| Sbjct 63519 UUUCUCAAAUUUUC-CCUCAGCUGUU-UACUUUGGCGGGUCAUAGGAAUGCCAA-------AGUAAGUGAAGUGUGGGACUCUAGC 63595 Query 154 CUAGGCCAUG 163 || || || | Sbjct 63596 CUGGGUCAAG 63605 >> URS00022B0277_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000079673.1) E-value: 8.8e+3 Identity: 69.23% Query coverage: 19.21% Gaps: 0.00% Alignment: Query 12 CCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGC 50 || || | | |||| ||| ||||| | ||||||| | Sbjct 353 ACAGGGGGUUACAUUUCAAUAUGAAGUUUGGGCAGGGAC 391 >> URS0000097901_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.5e+3 Identity: 71.11% Query coverage: 22.17% Gaps: 0.00% Alignment: Query 51 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC 95 || ||| || |||| ||||||||||||||| ||| | || Sbjct 8 AGCUUGAAUGCAGUUCCCCACUACCACAAAUUAUGCAGUCGAGUC 52 >> URS000005B827_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.8e+3 Identity: 56.19% Query coverage: 51.23% Gaps: 0.95% Alignment: Query 98 CCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGAC-CCUUCAUGAUCGGCCAUAGAC 186 | | |||| || | | | |||| | |||||||||||| | | || ||| || || | | ||||||| | Sbjct 56 UCUCACUGGGAAAUCGCAGGGGUCGGCACACCCCAAGUGCAAUGGGUGAGCCUUGCCCUGGGAAUACCGUCAACAUGAUCAUGAUGUCUC 145 Query 187 CCCGUCCAGGUAAGU 201 ||| | | | |||| Sbjct 146 CCCUGCUAAGAAAGU 160 >> URS00023D38FF_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC011067) E-value: 5e+3 Identity: 61.40% Query coverage: 23.65% Gaps: 15.79% Alignment: Query 39 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCU---------ACCACAAAUUAUGA 86 ||| | ||| | |||| | ||||||||||| | ||| |||| ||| Sbjct 61210 CUUGAAACGGGUCACGCGCAUGCGUACCCCCUUUGUUUGGUGCGCCAAAAAUCAUGU 61266 >> URS00023DC6D5_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC003449) E-value: 8.2e+3 Identity: 58.33% Query coverage: 45.32% Gaps: 13.54% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 | | |||||| | | || || | |||| || | | || | |||| | ||||| | |||||| | ||||| Sbjct 11822 UUUCUCAAAUUUUC-CCUCAGCUGUU-UACUUUGGCGGGUCAUAGGAAUGCCAA-------AGUAAGUGAAGUGUGGGACUCUAGC 11898 Query 154 CUAGGCCAUG 163 || || || | Sbjct 11899 CUGGGUCAAG 11908 >> URS00023EC04A_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC004479) E-value: 8.8e+3 Identity: 62.00% Query coverage: 24.63% Gaps: 0.00% Alignment: Query 19 GCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCC 68 |||||| || | || | |||||| | |||||||||| || Sbjct 206 UUAAAAUUACCCUUCGCGGAUGCGACAGGGGUCUCGCGAACGCGAACGUU 255 >> URS00023458D2_9606 Homo sapiens (human) HSALNT0406397 E-value: 5.8e+3 Identity: 52.54% Query coverage: 84.24% Gaps: 15.25% Alignment: Query 24 AUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUG 112 | ||| ||||||| || |||| | | | ||| || |||| |||| | ||| | | || | | Sbjct 74 UUAUAAGUUUGAAG--UUUGCAGAGAGCCCAGGAAAGCUUACCAAGGGGACCAGC-------------AUGCUCACGCCUCUGAG-----G 144 Query 113 GUAAGCCAGCGCACCCACCAA---GUGCAAUGUGGGCCACUAGCC-UAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCA 194 |||| || | | || || ||| ||| | | || |||| ||| | |||||| |||| | |||| || ||| Sbjct 145 UUAAGGAGGC-CCCUCAGGAAGAGGUGACAUGCGACUGGCCAGUGAAAGGCAUCCACCAUCCAUGAUGGGCCCUUGACCUCGCCCA 229 >> URS00023D1300_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC043727) E-value: 2.8e+3 Identity: 59.46% Query coverage: 33.50% Gaps: 8.11% Alignment: Query 74 CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG------CAAUG 141 | ||||| || | |||||| |||| || | ||| || |||||| | | || | || |||| Sbjct 9466 CUACAAAAGAUCCGGCCCACUCGUUCACUGGGCGGCAUGUUAGGCCAGCCCUCUGACUUAUUGGGAAACCAAUA 9539 >> URS00023D5874_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005342) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 30457 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 30520 >> URS00023DA799_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC012604) E-value: 3.2e+3 Identity: 56.32% Query coverage: 42.86% Gaps: 6.90% Alignment: Query 30 AUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGU 114 | ||| | |||| | | ||| | |||||| || | | ||| |||| | |||||||||| ||||| Sbjct 156341 ACUUGGGGCCUUGGUCGUGUCCGAACCAACGCGACACCUUUUGA------UAGGCGACAACCACCAUAUCACUUGGGGACAUGGU 156419 Query 115 AA 116 | Sbjct 156420 CA 156421 >> URS00025EFEA6_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000057142.1) E-value: 2.5e+3 Identity: 60.24% Query coverage: 40.89% Gaps: 3.61% Alignment: Query 68 CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACU 150 ||| || || |||| ||| | |||| |||||| | |||| ||| | | ||||| | |||| || ||| Sbjct 1560 CCUGAACAACUGAUUAAGACUUUGCUCCUCCUCCUUGGGAAACUGGUGAGCAUUC---CUCACCAGGCUCAAUUUGACCCAAG 1639 >> URS00023612CA_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC003118) E-value: 4.5e+3 Identity: 58.65% Query coverage: 63.55% Gaps: 7.52% Alignment: Query 4 UGCAAAAUCCAAGGAGCAAAAUUUAAAUUU---GAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 89 || |||| ||||| ||||| | |||||| | || ||| ||||| |||| || | | | ||| | | | ||| || Sbjct 9073 UGGAAAAAUGAAGGA-CAAAAGUCAAAUUUUCGGGGAAAAGGGCUGGGGCGUCGCGCUAGCCAGCGCGCCCUAGAAGGGACUCUGAGGU 9160 Query 90 CCACUCUCCCACUUGGGGAGAUGGUA-AGCCAGCGCACCCACCA 132 ||| ||||||| | || ||| || || |||| Sbjct 9161 CCAGC-----CCUUGGGGCGGUGCCCCUAGCAGAGCCCCAACCA 9199 >> URS000233672F_9606 Homo sapiens (human) HSALNT0320800 E-value: 2.6e+3 Identity: 63.16% Query coverage: 28.08% Gaps: 0.00% Alignment: Query 56 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 112 ||| || | ||||||||||||| | || | | |||||| | ||||| Sbjct 3311 GAAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGAAA 3367 >> URS00009B7661_10090 Mus musculus long non-coding RNA NONMMUT070508.2 E-value: 2.8e+3 Identity: 65.00% Query coverage: 29.56% Gaps: 1.67% Alignment: Query 50 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 109 | | |||||| ||| | |||||||||| || || || || |||| | | ||| Sbjct 937 AAGUGUGAACGCAAACCAUCACUACCACAAACUACGAAGUGG-CUUUCCCUCAUUUGGAA 995 >> URS00023BDB55_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005336) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 30457 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 30520 >> URS00027EAD47_9796 Equus caballus (horse) lncRNA (ENSECAG00000050665.1) E-value: 3.3e+3 Identity: 55.93% Query coverage: 51.72% Gaps: 11.02% Alignment: Query 45 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG--GGGAGAUGG--UAAGCCAGCGCACCCA 129 | | |||| ||| | || | ||| || |||| | | | |||||||| || |||| | | | | |||| || ||| Sbjct 1108 GGUGAGAGCGCAAACUCAGUCCUCUGCUAGCAUUAAUUCCACAGCCAAAUCUCCCACAUGCAGGGAAACAGCAUGGGUCAGCACAGCCA 1196 Query 130 CCAAGUGCAA---------UGUGGGCCAC 149 | || | || ||||||| | Sbjct 1197 GCCAGAGGAAAACGACUUUUGUGGGCGAG 1225 >> URS0002361B1A_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC008066) E-value: 5.3e+3 Identity: 68.89% Query coverage: 22.17% Gaps: 0.00% Alignment: Query 24 AUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCC 68 ||| | ||| | | ||||| | || | |||||||| |||| | Sbjct 20327 AUUAAUAUUAAGAAAGUUGGCCGAGGUUGUGCGAACGCAUACCUC 20371 >> URS000077BC9C_10090 Mus musculus (mouse) predicted gene 16174 E-value: 4.8e+3 Identity: 66.67% Query coverage: 25.12% Gaps: 9.80% Alignment: Query 84 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 || |||||||| ||| | ||||||| || | || || | ||||| Sbjct 67 AAACUUCCACUCUUCCAAUGGGGGAGAAGGGAGGC-AGAAC----CCCAAG 112 >> URS000013DC2B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.6e+3 Identity: 59.09% Query coverage: 42.36% Gaps: 2.27% Alignment: Query 57 AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGU 142 ||| | |||| | ||||||| ||| || | ||| ||||||| ||||| | | ||| | ||||||||| Sbjct 15 AACACAGUCCCCAAGGAGCACAAAUGAUGGGGUUGGGUUUCCCACACUUGGCGAGAUUACAGGGGUCAGCAUGUUCAGAGUGCAAUGG 102 >> URS00023F027A_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 285 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 375 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 376 GAUCUGAACCUCC 388 >> URS00025B04B4_175245 uncultured fungus sequence contains ITS1 E-value: 9.6e+3 Identity: 55.45% Query coverage: 45.81% Gaps: 9.90% Alignment: Query 71 CUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAU--------GUGGGCCACUA 151 | ||||||| || ||||| | | || || | ||| |||| | | ||| | | || ||| | || ||||| | Sbjct 102 GUGUCACAAAUCAU--CGUCCCCCCAUCCUCUCGAGGAUAUGGGACGGAAGCUGAUCUCCCGUGUGUUACCGCACGCGGUUGGCCAAAA 188 Query 152 GCCUAGGCCAUG 163 || || | | Sbjct 189 UCCGAGCUAAGG 200 >> URS00023E7380_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC003452) E-value: 8.2e+3 Identity: 58.33% Query coverage: 45.32% Gaps: 13.54% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 | | |||||| | | || || | |||| || | | || | |||| | ||||| | |||||| | ||||| Sbjct 72070 UUUCUCAAAUUUUC-CCUCAGCUGUU-UACUUUGGCGGGUCAUAGGAAUGCCAA-------AGUAAGUGAAGUGUGGGACUCUAGC 72146 Query 154 CUAGGCCAUG 163 || || || | Sbjct 72147 CUGGGUCAAG 72156 >> URS000236001D_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007110) E-value: 5.6e+3 Identity: 54.96% Query coverage: 62.07% Gaps: 7.63% Alignment: Query 9 AAUCCAAGGAGCAAAAUUUAAAUUUGAAG----AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCC 91 | ||||| | |||| || |||| | || ||| |||| |||| || ||| |||| |||| Sbjct 19265 GAAACAAGGGGGAAAAGUUGGAUUUUUGGGGGAAAAGGGCUGGGGUGUCGCGCCAGCCAG-----CGCACCCCAAAAAGGGACGCUG 19346 Query 92 -ACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 ||| |||| | ||| ||| || | ||| | |||| || | Sbjct 19347 AACUUUCCCCUUGGGGCAGAGCGUCUGGCAGAACGCCCAGCAGG 19390 >> URS0002368205_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC003449) E-value: 8.2e+3 Identity: 58.33% Query coverage: 45.32% Gaps: 13.54% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 | | |||||| | | || || | |||| || | | || | |||| | ||||| | |||||| | ||||| Sbjct 63526 UUUCUCAAAUUUUC-CCUCAGCUGUU-UACUUUGGCGGGUCAUAGGAAUGCCAA-------AGUAAGUGAAGUGUGGGACUCUAGC 63602 Query 154 CUAGGCCAUG 163 || || || | Sbjct 63603 CUGGGUCAAG 63612 >> URS000239C2DD_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC003515) E-value: 5.8e+3 Identity: 67.69% Query coverage: 32.02% Gaps: 4.62% Alignment: Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAU 172 || ||| |||| || | || || || |||||||||||| ||| | | |||||| ||| Sbjct 15432 GGAAGGUGGGCCACCG--GCAACGAAAUGAAAUGUGGGCCACCAGCA-AUGAAAUGACCGCUCAC 15493 >> URS00009B3353_10090 Mus musculus long non-coding RNA NONMMUT124782.1 E-value: 4.8e+3 Identity: 66.67% Query coverage: 25.12% Gaps: 9.80% Alignment: Query 84 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 || |||||||| ||| | ||||||| || | || || | ||||| Sbjct 66 AAACUUCCACUCUUCCAAUGGGGGAGAAGGGAGGC-AGAAC----CCCAAG 111 >> URS00023AB814_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC005515) E-value: 4.1e+3 Identity: 73.33% Query coverage: 20.69% Gaps: 6.67% Alignment: Query 26 UUAAAUUUGAAGAA---UUGGCAGGGGCCGCGCGAACGCGUACCC 67 |||| | |||||| ||||| | |||||||||||||||| Sbjct 6624 UUAAUUAUGAAGAUUGUUUGGCCAAAGUCGCGCGAACGCGUACCU 6668 >> URS000234158B_9606 Homo sapiens (human) HSALNT0014542 E-value: 3.2e+3 Identity: 68.18% Query coverage: 30.54% Gaps: 6.06% Alignment: Query 56 GAACGCGUA--CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAG 117 ||||| ||||| ||||||||||||||| || | | ||| || || || | || | ||| Sbjct 720 UAACGCAGCCCCCCCCACUACCACAAAUUAUGCAGUGGAAUUUCCUACAUUUAGGAAAAUCGCAAG 785 >> URS00023AFE06_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC003452) E-value: 8.2e+3 Identity: 58.33% Query coverage: 45.32% Gaps: 13.54% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCU 155 | | |||||| | | || || | |||| || | | || | |||| | ||||| | |||||| | ||||||| Sbjct 1526 UUUCUCAAAUUUUC-CCUCAGCUGUU-UACUUUGGCGGGUCAUAGGAAUGCCAA-------AGUAAGUGAAGUGUGGGACUCUAGCCU 1604 Query 156 AGGCCAUG 163 || || | Sbjct 1605 GGGUCAAG 1612 >> URS00023B94EB_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC008729) E-value: 5e+3 Identity: 60.22% Query coverage: 42.86% Gaps: 6.45% Alignment: Query 52 GCGCGAACGC---G---UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCAC 130 | |||||||| | ||| | | |||| | | | | | | |||| | || | ||||| ||||| | | ||| || Sbjct 246714 GAGCGAACGCUGUGUGCCACCGCAUAUACCGCUUAGUGUUAACUUUUGUCUCUAAGUUUGUGAGAUCGUAAGUCCGUGCAUGCAU 246798 Query 131 CAAGUGCA 138 || || || Sbjct 246799 CAUGUUCA 246806 >> URS00009B5FD3_10090 Mus musculus long non-coding RNA NONMMUT060177.2 E-value: 4.8e+3 Identity: 66.67% Query coverage: 25.12% Gaps: 9.80% Alignment: Query 84 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAG 134 || |||||||| ||| | ||||||| || | || || | ||||| Sbjct 128 AAACUUCCACUCUUCCAAUGGGGGAGAAGGGAGGC-AGAAC----CCCAAG 173 >> URS00023AFD8A_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC043725) E-value: 2.8e+3 Identity: 59.46% Query coverage: 33.50% Gaps: 8.11% Alignment: Query 74 CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUG------CAAUG 141 | ||||| || | |||||| |||| || | ||| || |||||| | | || | || |||| Sbjct 13814 CUACAAAAGAUCCGGCCCACUCGUUCACUGGGCGGCAUGUUAGGCCAGCCCUCUGACUUAUUGGGAAACCAAUA 13887 >> URS00023B3091_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005336) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 282673 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 282736 >> URS00023B9603_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC003513) E-value: 5.8e+3 Identity: 67.69% Query coverage: 32.02% Gaps: 4.62% Alignment: Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAU 172 || ||| |||| || | || || || |||||||||||| ||| | | |||||| ||| Sbjct 137087 GGAAGGUGGGCCACCG--GCAACGAAAUGAAAUGUGGGCCACCAGCA-AUGAAAUGACCGCUCAC 137148 >> URS00023AF10D_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005341) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 217763 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 217826 >> URS00023B8DBA_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAG 157 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 295 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAGGU 385 Query 158 GCCAUGACCCUUC 170 | ||| ||| | Sbjct 386 GAUCUGAACCUCC 398 >> URS00006FE841_69293 Gasterosteus aculeatus (three-spined stickleback) mir-181 microRNA precursor E-value: 8.8e+3 Identity: 66.00% Query coverage: 24.63% Gaps: 0.00% Alignment: Query 99 CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCA 148 | | || ||| | || |||||| | | ||||| ||||| ||| || Sbjct 20 CUGUCGGUGAGUUUGUGAGCCAGAGAAACCACCGAGUGCUGAGUGUACCC 69 >> URS00007FFB02_338471 Ronderosia bergi partial U1 E-value: 4.9e+3 Identity: 57.61% Query coverage: 44.33% Gaps: 2.17% Alignment: Query 67 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 || |||||| |||||||| | | | ||||| | |||| || | | | || | | |||||||||| | || | Sbjct 6 CCGGCUACCAAAAAUUAUGCGCCCGAGUUACCCACAUUAGGGGUAAUCGCAGGGGUCAGCUCGAUCGAAGUGCAAUGAAAGAGCCUCAC 94 Query 154 CUA 156 | Sbjct 95 CCG 97 >> URS00023B4755_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC009606) E-value: 7.9e+3 Identity: 75.00% Query coverage: 15.76% Gaps: 0.00% Alignment: Query 36 AGAAUUGGCAGGGGCCGCGCGAACGCGUACCC 67 | | ||||| | |||||||||||||||| Sbjct 19232 AAACUUGGCCAAAGUCGCGCGAACGCGUACCU 19263 >> URS00023B50B2_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005341) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 218882 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 218945 >> URS00007F7307_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 2.9e+3 Identity: 57.74% Query coverage: 76.85% Gaps: 13.10% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 |||||||||| |||| |||| | || ||||| | || | || || || | || ||| |||| | || Sbjct 4 GGGCCGCGCGUACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 129 ACCAAGUGCAAUGUG--GGCC--ACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | |||| |||| | || |||| ||||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCUGGCCUCACUA---UGGGGGUCCCGCCUUGAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS00008299C4_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 3e+3 Identity: 55.76% Query coverage: 76.85% Gaps: 9.70% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAGCCAGCGCACCC 128 ||||||||||||||| |||| | || ||||| | || | || || || | || ||| |||| | || Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 129 ACCAAGUGCAAUGUGGGCCACUAGCCUAGGCC-AUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 |||||||||| | | || || || |||| |||||| | | || |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCGCCUUGUUGAUCGCGAGACGCCUCCAGCCAGGUAAGUU 161 >> URS00027F8DCD_9793 Equus asinus (ass) lncRNA (ENSEASG00005024279.1) E-value: 4.2e+3 Identity: 69.35% Query coverage: 30.54% Gaps: 1.61% Alignment: Query 103 UGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGA 164 |||| || || | ||||| || ||||||| |||| || ||| +| |+||||||| || Sbjct 1234 UGGGAAGCCGGGAUGCCAGAGC-CCCACCAUACCCAAUUUGUGCCUUUGGUCUAGGCCGGGA 1294 >> URS00023DA418_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC012173) E-value: 2.7e+3 Identity: 55.14% Query coverage: 52.71% Gaps: 7.48% Alignment: Query 35 AAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCG 123 | ||| | | || ||||||| | || ||| | ||| | || ||| | |||||| | ||| || ||| Sbjct 9059 AGAAAUGCGGAAGGACCGCGCGCGCAAUUAUCCCAUUUACAGCGAAAA--------CACGCGGAUCCUUGGGUAUCGGGUCAGGUUGCG 9139 Query 124 CACCCACCAAGUGCAAUG 141 ||| |||||| || | Sbjct 9140 CACAGGUCAAGUGAAACG 9157 >> URS00023DD935_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC001214) E-value: 4e+3 Identity: 58.67% Query coverage: 36.95% Gaps: 0.00% Alignment: Query 30 AUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 104 || | || |+ ||| | | ||| ||||| || | | |||| | ||| || ||| ||||| ||| Sbjct 4079 AUGUACAGGACAGGCGUGAGUCGCCGGAACGAAUAUCUUCGCUACUAGAAAAAGUGGCGUAAUCUCUCAGUUUUG 4153 >> URS0000D00DF1_9598 Pan troglodytes (chimpanzee) processed transcript E-value: 3.3e+3 Identity: 61.73% Query coverage: 36.45% Gaps: 8.64% Alignment: Query 97 CCCACUUGGGGAGAUGGUAAGCCAGCGCA---CCCACCAAGUGCAAUGUG----GGCCACUAGCCUAGGCCAUGACCCUUC 170 ||||||||||| ||||| ||| | | | |||| | || | || ||||| | ||||||| | | || | Sbjct 1814 CCCACUUGGGGUGAUGGCUCGCCUGUGAGCUGCUGACCAUGGGCCACGUUCAUCAGCCACAUGUCUAGGCCUUAAGCCCAC 1894 >> URS0000C9773C_45464 Teladorsagia circumcincta U1 spliceosomal RNA E-value: 2.6e+3 Identity: 58.64% Query coverage: 76.35% Gaps: 7.41% Alignment: Query 47 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC-CACUUGGGGAGAUGGUAA----GCCAGCGCACCCAC- 130 ||||||||||||||| |||| | | ||||| | |||+ || || ||| | | | || | |+|||| +| || Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACGCGAAAAUUUAGCCGUUGGCUAACCUCACCUCG-AGGUUGCCACGCGGGUCAGCCUA--AACU 88 Query 131 CAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUG-ACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGU 201 | |||||||||| | || || || | ||||| |||||| |||| |||||||||| Sbjct 89 AAGGUGCAAUGUGAGGGCCUCACCACGGGGGUCCCGCCUUCCUGAUCGCGAGAUCCCCCCAGCCAGGUAAGU 160 >> URS0000E93CDD_9606 Homo sapiens (human) HSALNT0215739 E-value: 2.8e+3 Identity: 60.87% Query coverage: 44.33% Gaps: 3.26% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU--UGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAU 140 || |||| | ||||| |||||| || | | | | | | ||||||| |||||| || | | | |||| |||||| | Sbjct 358 GCAUGAACACA-GCCCCCAUGACCACAGAUGACGCAGCCGAGUUUCCCACUUUUGGGGAAAUUGCAGGGGUCAGCACGUCUGGAGUGCAGU 447 Query 141 G 141 | Sbjct 448 G 448 >> URS0000A8AD87_69293 Gasterosteus aculeatus (three-spined stickleback) miRNA (ENSGACG00000021523.1) E-value: 3.3e+3 Identity: 63.64% Query coverage: 27.09% Gaps: 0.00% Alignment: Query 99 CACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 | | || ||| | || |||||| | | ||||| ||||| ||| || || Sbjct 29 CUGUCGGUGAGUUUGUGAGCCAGAGAAACCACCGAGUGCUGAGUGUACCCUUACG 83 >> URS0000ECDAE8_5661 Leishmania donovani gene:LdHU3.19.1330(CDS-product:mitochondrial_carr ier_protein_putative) E-value: 6.7e+3 Identity: 53.99% Query coverage: 79.80% Gaps: 5.52% Alignment: Query 31 UUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAG 121 ||||| | ||| | || ||||| |||+ || |++ + |||| | || ||||+ ||| || | | | | | Sbjct 112 GUUGAACACUUGCGAAGGCGCGCGCAGACGUAAACACUUAUACGCACACACUAGAGCGUCUCCUCGGCCUCCCC---ACAC-----GGCCA 194 Query 122 CGCACCCACCAAGUGCAAUGUGGGCCACUAG-CCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUC 192 ||| | | || |||| | |||||| | ||| ||||||+||| ||| | | ||||||+| |+ Sbjct 195 CGCUCAACCAAACCGCAAACACGCGCACUAGACAUAGUCCAUGAUCCUACAUAAAAGUGCAUAGAUCGAUUU 266 >> URS0000BD80DF_10089 Mus caroli (Ryukyu mouse) predicted gene 16174 (MGP_CAROLIEiJ_G0003986.1) E-value: 7.1e+3 Identity: 73.68% Query coverage: 18.72% Gaps: 2.63% Alignment: Query 84 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAG 121 || |||||||| ||| | ||||||| || | || || Sbjct 67 AAACUUCCACUCUUCCAAUGGGGGAGAAGGGAGGC-AG 103 >> URS0000D584F0_9606 Homo sapiens (human) non-protein coding lnc-CSRNP3-9:6 E-value: 6.7e+3 Identity: 69.39% Query coverage: 24.14% Gaps: 0.00% Alignment: Query 152 GCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 ||||||||| |||||||| | || ||||| | | | ||||| | Sbjct 6173 UCCUAGGCCAAGACCCUUCUUACUCAGCCAUUGUCUCAUCUCAGGUUAU 6221 >> URS0000E9EFC0_9606 Homo sapiens (human) HSALNT0081179 E-value: 4.5e+3 Identity: 56.10% Query coverage: 38.42% Gaps: 8.54% Alignment: Query 69 CUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGC 146 || | | ||||| ||| | |||||| ||||| || || || |||| ||| || | | ||||| Sbjct 262 CUGCAUUGCCUGUUAUGCUGUCAAACCUCCCAUUUGGGCAGGCCUGAGGAGAGACAGCUCACUCAGUAUCAG---CUUGGGC 340 >> URS0000D3FA73_9598 Pan troglodytes (chimpanzee) retained intron E-value: 4.3e+3 Identity: 55.93% Query coverage: 57.64% Gaps: 2.54% Alignment: Query 20 CAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAA-UUAUGACGUCCACUCUCCCACUUGGGGAG 109 |||| | | |||||| | |||| | | | ||||| ||| +|||| ||| | || || || +| || | || | Sbjct 112 GGAAAUGGAGGCCUAAAGAAUGUGGAGGGCCAGAGGUAACGCAUACAUCCUCCACCCCUAAAUUCCCACAGAUAAA--CCGGCCCCCGGUG 200 Query 110 AUGGUAAGCCAGCGCACCCACCAAGUG 136 | | | | || || || + ||||||| Sbjct 201 AAGCUGACCCUGCUGACGUGCCAAGUG 227 >> URS0000A7EF36_10096 Mus spretus (algerian mouse) predicted gene 16174 (MGP_SPRETEiJ_G0004182.1) E-value: 7.1e+3 Identity: 73.68% Query coverage: 18.72% Gaps: 2.63% Alignment: Query 84 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAG 121 || |||||||| ||| | ||||||| || | || || Sbjct 67 AAACUUCCACUCUUCCAAUGGGGGAGAAGGGAGGC-AG 103 >> URS0000154051_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.6e+3 Identity: 61.02% Query coverage: 29.06% Gaps: 0.00% Alignment: Query 52 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 110 | || || | || | || ||||||||| || || | | ||||| | || || Sbjct 10 GUGCCAAUUCAGUCCUUCACUGCCACAAAUUGUGCAGUUGAAUUUCCCAUGUCUGGGGA 68 >> URS0000CAA30B_2044882 bacterium DOLJORAL78_65_58 6S RNA E-value: 5.9e+3 Identity: 65.31% Query coverage: 24.14% Gaps: 0.00% Alignment: Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUA 156 || |||||| ||| ||||||||+ | |||| || +|| | ||+| Sbjct 103 GGACGGUAAGACAGGGCACCCACUUGGAGCAACUCGGUUCAGUUGCUUC 151 >> URS00024285FC_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003696) E-value: 2.4e+3 Identity: 51.92% Query coverage: 42.86% Gaps: 16.35% Alignment: Query 84 UGACGUCCACUCUCCCA----------------CUUGGGGAG-AUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCU 155 || ||||||||| | | | ||| | ||||| |||| | | |||||||| || |||| ||| Sbjct 2740 CGAGCUCCACUCUCUGAGAGACGAUGUAGUUCGUUGGCUGAGAAGGGUAAACCAGAGAAGCCACCAAGAGCUUCGUGGAGGACUCAUAG 2828 Query 156 AGGCCAUGACCCUUC 170 | ||| ||| | Sbjct 2829 GUGAUCUGAACCUCC 2843 >> URS000239F143_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC018953) E-value: 7.9e+3 Identity: 75.00% Query coverage: 15.76% Gaps: 0.00% Alignment: Query 36 AGAAUUGGCAGGGGCCGCGCGAACGCGUACCC 67 | | ||||| | |||||||||||||||| Sbjct 6229 AAACUUGGCCAAAGUCGCGCGAACGCGUACCU 6260 >> URS00001C56FC_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.8e+3 Identity: 54.90% Query coverage: 67.98% Gaps: 14.38% Alignment: Query 65 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGA----------UG----GUAAGCCAGCGCACCCACCAAGUGCAA 139 |||| || |||||||||| || | | |||| | |||||||| || || | |||| | ||||| || Sbjct 22 CCCCAACUCCCACAAAUUACACAGUUGAGUUUCCCGCACUGGGGAGAAUCACAGGGCUGAUGUGUGAAUCAGCAAA--UCUCAAGUAUAA 109 Query 140 UGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAGUA 202 || || | ||| || | ||| || |||| || | ||||||||||| Sbjct 110 UGGAGGA----ACCCUUGGGAACCACCU-UCCGGAUCAUGAUCUCUCCUCUGCCAGGUAAGUA 167 >> URS000237ED6C_226208 Salvia miltiorrhiza (S. miltiorrhiza) long non-coding RNA (SMIL_LNC010458) E-value: 5.7e+3 Identity: 57.52% Query coverage: 54.68% Gaps: 1.77% Alignment: Query 11 UCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAAC--GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC 95 | ||| ||| || |||| ||| | | | || || ||||| | | | ||| || | ||||| |||| | || Sbjct 4208 ACUUAGGGGCACAAACAUGAUUUCAAGCAAUAGAAGAAUGCGAGCGAAGAGGUGCAACCCGUCCAAAUAAAAUUGUGACAAACCCUA 4294 Query 96 UCCCACUUGGGGAGAUGGUAAGCCAG 121 ||| || || | ||| | | || | Sbjct 4295 UCCAACAUGUGAAGAAGCUUCGCAGG 4320 >> URS00023E43B0_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC004860) E-value: 4.8e+1 Identity: 69.57% Query coverage: 33.99% Gaps: 1.45% Alignment: Query 46 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGU 114 || | | || ||| | | |||| | || || ||| ||| | |||| || ||||||||||||| || Sbjct 26454 GGAGGCACGUGAAUGAAUGCCCCUUUUAUCAGAAAAUAUUAAAUCCAU-UUCACACUUGGGGAGAUAGU 26521 >> URS0002361041_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC012316) E-value: 3.1e+3 Identity: 57.14% Query coverage: 47.78% Gaps: 13.39% Alignment: Query 2 ACUGCAAAAUCCAAGGAGCAAAAUUUAAAUUUGAAGAAUUGG------CAGGGGC------CGCGCGAACGCGUAC---CCCCUC 71 |||| | ||||| |||||||| ||| || |||||| | | |||| | | | || || || || | Sbjct 392269 ACUGAAGAAUCCUAGGAGCAAGCUUUGGGUUAGAAGAACUUGAUCCCGCAGGUACAAGCUUGGAGUAGACACGGACAGGCCGGGC 392353 Query 72 UACCACAAAUUAUGACGUCCACUCUCC 98 | || | ||| || |||||||| Sbjct 392354 UUCCUCCAAUCUACACCUCCACUCUAU 392380 >> URS0002412EFB_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC021875) E-value: 4.3e+3 Identity: 58.12% Query coverage: 54.19% Gaps: 7.69% Alignment: Query 79 AAUUAUGACGU---CCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCC----UAGG 158 ||| ||| || | |||||||||| || | | | ||||| | ||| ||| |||| |||| | ||| | | Sbjct 41555 AAUAAUGGUGUACUUCCUACUCCCACUUGCGGUUCUCCUC--UCCUCGCACGCGCCAUGUGUCAUGUUGGCCCAUGGCCACCUCAUG 41639 Query 159 CCAUGACCCUUCAUGAUCGGCCAUAGACCC 188 || || ||||| | | |||| | | | Sbjct 41640 CCCAGAUUGCUCAUGUUGGCCCAUGGCCAC 41669 >> URS000282C43E_37623 Ostrea edulis (European flat oyster) uncharacterized LOC125680667 E-value: 3.6e+3 Identity: 55.77% Query coverage: 48.77% Gaps: 4.81% Alignment: Query 30 AUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA-----CUUGGGGAGAUGGU 114 || ||| ||| ||| | ||| | | |||| |||| | | |||| |||||||| | | || ||||| || Sbjct 439 AUCAAAAGCAUUUUCAGUAUCAGCGUGGAUAUGUACAACCUCCGGAGUGAUCUUUGACUUCCACUCUAAUAAAGACGUCGGUGAGAUAGU 528 Query 115 AAGCCAGCGCACCC 128 ||| | | || | Sbjct 529 GAGCUUGAGAACUC 542 >> URS00023DE014_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC003452) E-value: 8.2e+3 Identity: 58.33% Query coverage: 45.32% Gaps: 13.54% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 | | |||||| | | || || | |||| || | | || | |||| | ||||| | |||||| | ||||| Sbjct 25285 UUUCUCAAAUUUUC-CCUCAGCUGUU-UACUUUGGCGGGUCAUAGGAAUGCCAA-------AGUAAGUGAAGUGUGGGACUCUAGC 25361 Query 154 CUAGGCCAUG 163 || || || | Sbjct 25362 CUGGGUCAAG 25371 >> URS000279E202_74358 Podarcis lilfordi non-coding RNA E-value: 2.9e+3 Identity: 53.91% Query coverage: 56.65% Gaps: 7.83% Alignment: Query 59 CGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGG 144 || ||| |||| | | | ||||| | || || | || || | ||||| ||| | ||| | || | Sbjct 44028 UGCCUAC--------ACACACACACUCCAGCCCACUGUGGCAUCUGUG-GGACCGUGAACCAGCCCACACCACAAAAACUUUGCCG 44104 Query 145 GCCACUAGCCUAGGCCAUGACCCUUCAUG 173 || || | ||| ||||| | || | | Sbjct 44105 ACCCCUGGGCUAUGCCAUACCUUUUAAAG 44133 >> URS00022B2EAE_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000086186.1) E-value: 3.8e+3 Identity: 58.14% Query coverage: 41.38% Gaps: 2.33% Alignment: Query 91 CACUCUCCCACUUGGGGAGAUGGUAAGCCAGC--GCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 | ||||| || ||||| || || | | | | | || ||| ||| || ||||| || | || | || ||| || Sbjct 429 AAGAUUCCCAUUUUGGGAGUUGCUAUGUGACCAAGGUCUGCCCCUGUGGUAUGGGGACCACUUGCUCAUGCAGUUACAGUUCUUGC 514 >> URS000236B425_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC005340) E-value: 7.5e+3 Identity: 64.06% Query coverage: 30.54% Gaps: 3.13% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGU--ACCCCCUCUACCACAAAUUA 83 || |||| |||||||| | | |||| || || ||| | || | || | ||||| || Sbjct 220594 GAAGUUAAGAUUGAAGAACUUGUAGGGUCCUUGCAAACUUAUGAACUCACUGUCACACAACCUA 220657 >> URS000051F49B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.3e+3 Identity: 53.33% Query coverage: 50.74% Gaps: 12.38% Alignment: Query 65 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAG 152 ||| ||||||||||||| ||| | | |||| | || |||| | | | | || ||| ||||| Sbjct 23 UUCCCAUUACCACAAAUUAUACAGUCAAGUUUCCCCUAUUUUGGGAAAAUGCAGGGGUCAAAACAUUUGGAGUACAAUG----------- 101 Query 153 CCUAGGCCAUGACCC 167 ||||||| | || Sbjct 102 AAUAGGCCACGCCCU 116 >> URS0000CAA30B_2044883 bacterium DOLZORAL124_64_63 6S RNA E-value: 5.9e+3 Identity: 65.31% Query coverage: 24.14% Gaps: 0.00% Alignment: Query 108 AGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUA 156 || |||||| ||| ||||||||+ | |||| || +|| | ||+| Sbjct 103 GGACGGUAAGACAGGGCACCCACUUGGAGCAACUCGGUUCAGUUGCUUC 151 >> URS00023A2AE9_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC003449) E-value: 8.2e+3 Identity: 58.33% Query coverage: 45.32% Gaps: 13.54% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU----GGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGC 153 | | |||||| | | || || | |||| || | | || | |||| | ||||| | |||||| | ||||| Sbjct 63347 UUUCUCAAAUUUUC-CCUCAGCUGUU-UACUUUGGCGGGUCAUAGGAAUGCCAA-------AGUAAGUGAAGUGUGGGACUCUAGC 63423 Query 154 CUAGGCCAUG 163 || || || | Sbjct 63424 CUGGGUCAAG 63433 >> URS00023A7F70_4530 Oryza sativa (Asian cultivated rice) long non-coding RNA (OSAT_LNC000751) E-value: 5.1e+3 Identity: 62.90% Query coverage: 30.54% Gaps: 1.61% Alignment: Query 72 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 || |||| |||| | |||| || | ||| ||||| || |||||||| || | Sbjct 69284 UAUUACAACUUAUUGCA-CCACCUCCCUGGUAGGGAUGAUGGAGAGGCAGCGCACUCAGACA 69344 >> URS000021E240_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3e+3 Identity: 55.73% Query coverage: 62.56% Gaps: 3.82% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUG--GUAAGCCAGCGCACCCACCAA 133 | | | ||| | |||| |||||||||||||| | | | ||| || | | || || | | |||| || || | Sbjct 6 GAGAGUGUGAAUACAGUCCCCUACUACCACAAAUUAUUCAGCUGAGUUUCCUACGUUUGAGGCAAUCCAAGAGGUCAGCACAUCCUGAAU 95 Query 134 GUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGA 174 | | | ||| | | |||||| | |||||||| Sbjct 96 GAAGUAGAUAAGCCUC-ACCCUAGGAAAACCAUCUUCAUGA 135 >> URS0002382FF1_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC014541) E-value: 8e+3 Identity: 62.90% Query coverage: 29.56% Gaps: 3.23% Alignment: Query 22 AAAUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUAC--CACAAAU 81 || ||||| |||||||| ||| ||| | || |||| | | | ||| ||||| Sbjct 19731 GAAGUUAAAAUUGAAGAACUGGUAGGAUCGUUGCAAACGUAUGAACUCACUAUUACACAACC 19792 >> URS000238816B_57577 Trifolium pratense (T. pratense) long non-coding RNA (TPRA_LNC008572) E-value: 4.7e+3 Identity: 58.14% Query coverage: 41.87% Gaps: 4.65% Alignment: Query 23 AAUUUAAAUUUGAAGAAUUG-GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 107 ||||||| | ||||| | || ||| |||||| ||| | | |||||||||| || || || | ||| Sbjct 98 CAUUUAAACUAU---AAUUGGGUGCAGGACGCACGAACGUAGGCCCAAUUAGCAACAAAUUAUGGUGUAGGUUCCACCGAUGUGGG 180 >> URS0002414CEE_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC008066) E-value: 5.3e+3 Identity: 68.89% Query coverage: 22.17% Gaps: 0.00% Alignment: Query 24 AUUUAAAUUUGAAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCC 68 ||| | ||| | | ||||| | || | |||||||| |||| | Sbjct 20354 AUUAAUAUUAAGAAAGUUGGCCGAGGUUGUGCGAACGCAUACCUC 20398 >> URS00002BFBEF_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.9e+3 Identity: 53.98% Query coverage: 54.68% Gaps: 1.77% Alignment: Query 48 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGU 135 | | || || || | |||| | ||||||||||| || | || || ||| ||| || | | | || ||| Sbjct 6 AGGAGGGCAAAAGCAUCUCCCCAUUUUCACAAAUUAUGCAGUGGGGUUUCUCAUGUUUGAGGAAAUCACAGGAAUCAGUACAUCUGGAGU 95 Query 136 GCAAUGUGGGCCACUAGCCUAGG 158 ||||| |||||| || Sbjct 96 UCAAUGGACAAGCUUAGCCUUGG 118 >> URS0000D5A72C_9606 Homo sapiens (human) non-protein coding lnc-CSRNP3-9:5 E-value: 6.7e+3 Identity: 69.39% Query coverage: 24.14% Gaps: 0.00% Alignment: Query 152 GCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACCCCGUCCAGGUAAG 200 ||||||||| |||||||| | || ||||| | | | ||||| | Sbjct 6232 UCCUAGGCCAAGACCCUUCUUACUCAGCCAUUGUCUCAUCUCAGGUUAU 6280 >> URS0000A8D1FB_9669 Mustela putorius furo (Domestic ferret) lncRNA (ENSMPUG00000026694.1) E-value: 3.8e+3 Identity: 59.46% Query coverage: 36.45% Gaps: 5.41% Alignment: Query 60 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAA 133 || |||| ||| | || | | ||||| | | ||| | |||| |||| || || || || | || Sbjct 343 CUGUUCCCCUUCUCCUCCAUA----GGCGUCCUCACCCCCUUAUAGGGAAAUGGAAACUAAGAGCUGCCUCUAA 412 >> URS0000E741E9_38626 Phascolarctos cinereus (koala) lncRNA (ENSPCIG00000030634.1) E-value: 5.3e+3 Identity: 58.16% Query coverage: 48.28% Gaps: 3.06% Alignment: Query 98 CCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCAAGUGCAAUGUGGGCCACUAGCCUAGGCCAUGACCCUUCAUGAUCGGCCAUAGACC 187 | |||||| || || |||||| | | || | | ||| ||| | |||||| ||| | || || || | | |||| Sbjct 659 CAGCUUGGGCUGAAGGGAAGCCAAGACUGAUAUCAGCUUCCGUGU---CCAACCACAUAGGCCUUGAGACCUCCUGUUCUGGUAGUGACC 745 Query 188 CCGUCCAG 195 | || | | Sbjct 746 CUGUUCUG 753