Os03g0133875 Query: UUACUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUG GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCAC GGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU Number of hits: 859 >> URS00024079D4_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC011138) E-value: 1.2e-41 Identity: 89.12% Query coverage: 87.33% Gaps: 0.52% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 117 || |||| ||| ||||| | | | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2387 AAAGUGGACAAAAGUUUAAUU-UCAGGAAUUGGCGGGGGCCGCGCGAACGCGUACCCCCUCUGCCACAAAUUAUGACGUCCACUCUCCC 2474 Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 ||||||||||||||||| ||||||| | ||| |||||||||||| |||||||| |||||||||| |||||||||||| |||||||||| Sbjct 2475 ACUUGGGGAGAUGGUAAGCCAACGCACCCACAAAGUGCAAUGUGGGCCAUUGACCUAGGCCACGGGCCUUCUUGAUCGCCCGUCGACCC 2563 Query 207 CGUCCAGGUAAGUAU 221 ||||||||||||||| Sbjct 2564 CGUCCAGGUAAGUAU 2578 >> URS00023CE889_4513 Hordeum vulgare (H. vulgare) long non-coding RNA (HVUL_LNC006469) E-value: 4.8e-38 Identity: 86.53% Query coverage: 87.33% Gaps: 0.00% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC 119 | ||| |||||| ||||| || || ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| Sbjct 289 ACCAGGUACCAAAAUUUAAUAUUCAAGAACUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUAACACAAAUUACGACGUUCACUCUCCCAC 379 Query 120 UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUC 210 ||||||||||| || ||| ||||| |||||||||||||||| |||| | | |||||||||| |||||||||||| |||||||||||||| Sbjct 380 UUGGGGAGAUGAUAGGCCAGCGCGCCCACCAAGUGCAAUGUGGGCCACUAACCUAGGCCACGGGCCUUCUUGAUCGCCCGUCGACCCCGUC 470 Query 211 CAGGUAAGUAU 221 ||||||||||| Sbjct 471 CAGGUAAGUAU 481 >> URS0002416B38_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC007972) E-value: 6.2e-38 Identity: 86.91% Query coverage: 86.43% Gaps: 0.00% Alignment: Query 31 GAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 |||||||||| || || ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 347013 CAGGGACCAAACUUAAAUUUUGAAGGAUCGACAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 347097 Query 116 CCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGU 200 ||||||||| ||||||| |||||||| |||||||||||||||||| ||| ||| |||||||| |||||||||||| ||| Sbjct 347098 CCACUUGGGAAGAUGGUGGACCAACGCAUUCACCAAGUGCAAUGUGAACCACUGACCCAGGCCACGAGCCUUCUUGAUCGCUCGU 347182 Query 201 CGACCCCGUCCAGGUAAGUAU 221 ||||||||||||||||||||| Sbjct 347183 CGACCCCGUCCAGGUAAGUAU 347203 >> URS00023B5403_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC009336) E-value: 1.2e-37 Identity: 86.70% Query coverage: 85.07% Gaps: 0.00% Alignment: Query 32 AGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 120 | ||| |||| ||||| || | ||||||||||||||||||||||||||||||||| || ||||||||||||||| || ||||||||| Sbjct 5139 AAGGAGCAAAAUUUAAUUUAAACGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUUUAUCACAAAUUAUGACGUUCAUUCUCCCACU 5227 Query 121 UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGU 209 |||||||||| | ||||||| | |||||||||||||||| |||||||| ||||||||| |||| ||||||| ||||||||||||| Sbjct 5228 UGGGGAGAUGAUGGGCCAACGCACCCACCAAGUGCAAUGUGGGCCAUUGACCCAGGCCACGGGCCUUGUUGAUCGCCCGUCGACCCCGU 5316 Query 210 CCAGGUAAGU 219 |||||||||| Sbjct 5317 CCAGGUAAGU 5326 >> URS00023BC36C_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC009287) E-value: 1.3e-36 Identity: 86.32% Query coverage: 85.97% Gaps: 0.00% Alignment: Query 32 AGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC 116 |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 170857 AGGGACCAAAAUUUAAUUUUCAAGGAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC 170941 Query 117 CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUC 201 |||||||||||||||| ||| ||| |||||| |||||||| ||| ||| |||||||| |||||||||||| |||| Sbjct 170942 CACUUGGGGAGAUGGUGGGCCAGCGCAUCCACCAAAUGCAAUGUUGACCACUGACCCAGGCCACGAGCCUUCUUGAUCGCUCGUC 171026 Query 202 GACCCCGUCCAGGUAAGUAU 221 |||||||||||||||||||| Sbjct 171027 GACCCCGUCCAGGUAAGUAU 171046 >> URS00023C1DF3_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC010704) E-value: 3e-36 Identity: 84.98% Query coverage: 96.38% Gaps: 1.41% Alignment: Query 9 CAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAA 97 ||||||| | | ||| | |||| | | ||||||||| |||| ||||| || ||||||||||||| | |||| |||||| ||||| Sbjct 7713 CAAAGGGGCGGCAAGGA-ACAAAAUUCAUGAAAUUUUAAUUUUA-AAAAUUGACAAGGGCCGCGCGAACACAUACC-CCUCUAUCACAA 7798 Query 98 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCU 186 |||| ||| |||||||||||||||| |||||||||| |||||| | |||||||| ||||||||||||||||||| ||||||| |||||| Sbjct 7799 AUUACGACAUCCACUCUCCCACUUGAGGAGAUGGUAGACCAACACACUCACCAAAUGCAAUGUGAGCCAUUGAUCUAGGCCAUGGCCCU 7887 Query 187 UCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||||| ||| |||||||||||||||||||||| Sbjct 7888 UCUUGAUCAGCCAUCGACCCCGUCCAGGUAAGUAU 7922 >> URS000238BCEC_4577 Zea mays (Z. mays) long non-coding RNA (ZMAY_LNC000781) E-value: 7.8e-35 Identity: 84.74% Query coverage: 85.97% Gaps: 0.00% Alignment: Query 32 AGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 120 | |||||| | || || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2539 AAGGACCAGAAUUAAAUUUAUCAGAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 2627 Query 121 UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGU 209 |||||||||||||| ||| ||| | | ||| |||||||| |||| ||| |||||||| | |||||||||| ||||||||||| Sbjct 2628 UGGGGAGAUGGUAAGCCAGCGCACCCGCCAUGUGCAAUGCAGGCCACUGACCUAGGCCACUGGGCUUCUUGAUCCCUAGUCGACCCCGU 2716 Query 210 CCAGGUAAGUAU 221 |||||||||||| Sbjct 2717 CCAGGUAAGUAU 2728 >> URS0002422F35_51953 Elaeis guineensis (African oil palm) long non-coding RNA (EGUI_LNC020975) E-value: 1.5e-33 Identity: 83.87% Query coverage: 84.16% Gaps: 0.00% Alignment: Query 36 ACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 123 | ||| |||||| | | | |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7071 AAAAAAAUUUAAAGAAAAGAAUUUGGUAGGGGCCGCGCGGACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 7158 Query 124 GGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCC 211 |||||||||| | || ||| | | |||||||||||| | ||| | |||||| ||| ||||||||||| || |||||||||||| Sbjct 7159 GGAGAUGGUAGAGCAGCGCUCCCGCCAAGUGCAAUGCGGGCCGCUACCCUAGGCCGCGGGCCUUCUUGAUCACCCAUCGACCCCGUCC 7246 Query 212 AGGUAAGUAU 221 |||||||||| Sbjct 7247 AGGUAAGUAU 7256 >> URS0002365A55_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC011279) E-value: 6.5e-33 Identity: 83.24% Query coverage: 83.71% Gaps: 0.54% Alignment: Query 36 ACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 124 | |||| ||| |||||| | |||||||||||||||||||||||||||||||||||| || |||||||||||| || ||||||||||||| Sbjct 1173 AUCAAAAUUUUAAUUUA-GAAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUAUCAUAAAUUAUGACGUUCAUUCUCCCACUUGGG 1260 Query 125 GAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAG 213 |||||| || | | | | |||||||||||||| | || | ||||||| | |||||||||||||||| | |||||||||||| Sbjct 1261 GAGAUGAUAGGCGAGCACAUCAACCAAGUGCAAUGUUGGUCACUAGCCUAGGCCAUGACCCUUCUUGAUCGGCCAUAGACCCCGUCCAG 1349 Query 214 GUAAGUA 220 ||||||| Sbjct 1350 GUAAGUA 1356 >> URS000241C23D_4555 Setaria italica (foxtail millet) long non-coding RNA (SITA_LNC005245) E-value: 7.2e-33 Identity: 86.67% Query coverage: 74.66% Gaps: 0.00% Alignment: Query 55 UAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACG 141 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||| |||| | Sbjct 51230 AAUUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUUCCACAAAUUAUGACGUCCACUCUCCCGUUUAGGAAGAUGGUAAGCCAAUG 51316 Query 142 CGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | | |||||||||||| ||||||||| ||||||| || ||||||||||||| |||||||||||||||||||| Sbjct 51317 CUCCUCCCAAGUGCAAUGGAGGCCAUUGAUUUAGGCCAUAGCUCUUCUUGAUCGGCUAUCGACCCCGUCCAGGUAAGU 51394 >> URS0002381C83_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC010593) E-value: 7.4e-34 Identity: 82.76% Query coverage: 89.14% Gaps: 2.96% Alignment: Query 23 GUAAACAAGAGGGACCAA---AUUUUAAAUU--UAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGA 104 |||||| | ||||||| |||| ||||| || ||| |||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 27395 UCAAACAAAAAGGACCAAAAAAUUUGAAAUUGAUACGUAUUUGGUAGGGGCCGCGCGAACGCGUACCCCCUCUAUCACAAAUUAUGA 27481 Query 105 CGUCCACUCUCCCACU-UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUU 190 ||||||||||||| | ||||||||||||| ||| ||||| ||| ||||||||||| |||| | ||||||| | | |||||| Sbjct 27482 CGUCCACUCUCCCUCAAAGGGGAGAUGGUAAGCCAGCGCGCCCACAAAGUGCAAUGUCGGCCACUAGCCUAGGCCAUGACUCUUCUU 27568 Query 191 GAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 |||| ||| | |||||||||||||||||| Sbjct 27569 GAUCAGCCAUAGACCCCGUCCAGGUAAGU 27597 >> URS00023C340A_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC010593) E-value: 7.4e-34 Identity: 82.76% Query coverage: 89.14% Gaps: 2.96% Alignment: Query 23 GUAAACAAGAGGGACCAA---AUUUUAAAUU--UAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGA 104 |||||| | ||||||| |||| ||||| || ||| |||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 32686 UCAAACAAAAAGGACCAAAAAAUUUGAAAUUGAUACGUAUUUGGUAGGGGCCGCGCGAACGCGUACCCCCUCUAUCACAAAUUAUGA 32772 Query 105 CGUCCACUCUCCCACU-UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUU 190 ||||||||||||| | ||||||||||||| ||| ||||| ||| ||||||||||| |||| | ||||||| | | |||||| Sbjct 32773 CGUCCACUCUCCCUCAAAGGGGAGAUGGUAAGCCAGCGCGCCCACAAAGUGCAAUGUCGGCCACUAGCCUAGGCCAUGACUCUUCUU 32859 Query 191 GAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 |||| ||| | |||||||||||||||||| Sbjct 32860 GAUCAGCCAUAGACCCCGUCCAGGUAAGU 32888 >> URS00023534F9_4513 Hordeum vulgare (H. vulgare) long non-coding RNA (HVUL_LNC016999) E-value: 2.2e-32 Identity: 83.15% Query coverage: 82.35% Gaps: 4.89% Alignment: Query 38 CAAAUUUUAAAUUUAG--GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 122 |||||| | || | |||||||||||||||||||| ||||||||| ||||||||| ||||||| ||||||||| | Sbjct 54118 GAAAUUUAAGUUUGAACUUGAAUUGGCAGGGGCCGCGCGA-------CCCCCUCUAUCACAAAUUAAGACGUCCGCUCUCCCACGAG 54197 Query 123 GGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGU 209 |||||||||| ||||||||||| |||||||| ||| ||||||||||| ||||||||| |||||||||||||| |||||||||||| Sbjct 54198 AGGAGAUGGUAGGCCAACGCGCUCGCCAAGUGCGAUGCGAGCCAUUGAUCUAGGCCACGACCCUUCUUGAUCGGUCGUCGACCCCGU 54284 Query 210 CCAGGUAAGU 219 |||||||||| Sbjct 54285 CCAGGUAAGU 54294 >> URS000235505A_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008309) E-value: 2.7e-32 Identity: 86.06% Query coverage: 74.66% Gaps: 0.00% Alignment: Query 55 UAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||| |||| || Sbjct 8309 AAUUUGGCAAGGGCCGCGCGAACGCGUACCCCCUCUUCCACAAAUUAUGACGUCCACUCUCCCGUUUAGGAAGAUGGUAAGCCAAUGCU 8397 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | |||||||||||| ||||||||| ||||||| || ||||||||||||| |||||||||||||||||||| Sbjct 8398 CCUCCCAAGUGCAAUGGAGGCCAUUGAUUUAGGCCAUAGCUCUUCUUGAUCGGCUAUCGACCCCGUCCAGGUAAGU 8473 >> URS00023B7350_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008309) E-value: 2.7e-32 Identity: 86.06% Query coverage: 74.66% Gaps: 0.00% Alignment: Query 55 UAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||| |||| || Sbjct 8574 AAUUUGGCAAGGGCCGCGCGAACGCGUACCCCCUCUUCCACAAAUUAUGACGUCCACUCUCCCGUUUAGGAAGAUGGUAAGCCAAUGCU 8662 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | |||||||||||| ||||||||| ||||||| || ||||||||||||| |||||||||||||||||||| Sbjct 8663 CCUCCCAAGUGCAAUGGAGGCCAUUGAUUUAGGCCAUAGCUCUUCUUGAUCGGCUAUCGACCCCGUCCAGGUAAGU 8738 >> URS00023F77A7_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008309) E-value: 2.7e-32 Identity: 86.06% Query coverage: 74.66% Gaps: 0.00% Alignment: Query 55 UAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||||| |||| || Sbjct 8309 AAUUUGGCAAGGGCCGCGCGAACGCGUACCCCCUCUUCCACAAAUUAUGACGUCCACUCUCCCGUUUAGGAAGAUGGUAAGCCAAUGCU 8397 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | |||||||||||| ||||||||| ||||||| || ||||||||||||| |||||||||||||||||||| Sbjct 8398 CCUCCCAAGUGCAAUGGAGGCCAUUGAUUUAGGCCAUAGCUCUUCUUGAUCGGCUAUCGACCCCGUCCAGGUAAGU 8473 >> URS0002355F7A_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008447) E-value: 9.3e-32 Identity: 81.62% Query coverage: 83.71% Gaps: 1.08% Alignment: Query 37 CCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 123 |||| |||| | | | || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 22489 ACAAACUUUAUACAUUAG--UUUAGUAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCUGCUUGA 22573 Query 124 GGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUC 210 ||||||||||| || || | |||||||||||| |||| ||| ||||||| |||||||||||||||| | ||||||||| Sbjct 22574 GGAGAUGGUAAGCCCGUGCUCCUCCCAAGUGCAAUGGAGGCCACUGACUUAGGCCAUAACCCUUCUUGAUCGGCCAUAGACCCCGUC 22660 Query 211 CAGGUAAGUAU 221 ||||||||||| Sbjct 22661 CAGGUAAGUAU 22671 >> URS00023E1C94_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008447) E-value: 9.3e-32 Identity: 81.62% Query coverage: 83.71% Gaps: 1.08% Alignment: Query 37 CCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 123 |||| |||| | | | || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 22490 ACAAACUUUAUACAUUAG--UUUAGUAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCUGCUUGA 22574 Query 124 GGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUC 210 ||||||||||| || || | |||||||||||| |||| ||| ||||||| |||||||||||||||| | ||||||||| Sbjct 22575 GGAGAUGGUAAGCCCGUGCUCCUCCCAAGUGCAAUGGAGGCCACUGACUUAGGCCAUAACCCUUCUUGAUCGGCCAUAGACCCCGUC 22661 Query 211 CAGGUAAGUAU 221 ||||||||||| Sbjct 22662 CAGGUAAGUAU 22672 >> URS00023D20E1_4641 Musa acuminata (dwarf banana) long non-coding RNA (MACU_LNC004735) E-value: 2.7e-31 Identity: 80.73% Query coverage: 85.52% Gaps: 1.56% Alignment: Query 33 GGGACCAAAUUUUAA---AUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 120 ||||||| ||||| | | | | || |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 58 UGGACCAACGUUUAAUAGACACUAGAAUUGGGUAGGGGCCGCGCGUACGCGUACCCCCUCUGCCACAAAUUAUGACGUCCACUCUCCCACU 148 Query 121 UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCC 211 |||||||||||||| ||| || | |||||||||||| |||| || ||||||| | |||| ||||||| || |||||||||||| Sbjct 149 UGGGGAGAUGGUAAGCCAGUGCACCUCCCAAGUGCAAUGGAGGCCACUGGCCUAGGCCAUGAGCCUUUUUGAUCGCCCAUCGACCCCGUCC 239 Query 212 AGGUAAGUAU 221 |||||||||| Sbjct 240 AGGUAAGUAU 249 >> URS0002392F4A_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC004092) E-value: 1.3e-30 Identity: 81.42% Query coverage: 82.81% Gaps: 0.00% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 125 ||| | |||||| |||||| |||||||||||| ||||||||||| || ||||||||| ||||||||||||||||||||||| Sbjct 55286 AAAAAAUUAAUUUAACAAAUUGGUAGGGGCCGCGCGGACGCGUACCCCUGCUGUCACAAAUUACGACGUCCACUCUCCCACUUGGGG 55372 Query 126 AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 ||| |||| |||| ||| | |||| |||||||||| || |||| ||||||| | ||||| ||| || || ||||||||| ||| Sbjct 55373 AGAAGGUAGACCAGCGCACCCACCGCGUGCAAUGUGGACCGCUGAUCUAGGCCAUAGGCCUUCCUGACCGCCCAUCGACCCCGCCCA 55459 Query 213 GGUAAGUAU 221 ||||||||| Sbjct 55460 GGUAAGUAU 55468 >> URS000240F619_51953 Elaeis guineensis (African oil palm) long non-coding RNA (EGUI_LNC020976) E-value: 1.5e-33 Identity: 83.87% Query coverage: 84.16% Gaps: 0.00% Alignment: Query 36 ACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 125 | ||| |||||| | | | |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 AAAAAAAUUUAAAGAAAAGAAUUUGGUAGGGGCCGCGCGGACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 212 Query 126 AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGU 215 |||||||| | || ||| | | |||||||||||| | ||| | |||||| ||| ||||||||||| || |||||||||||||||| Sbjct 213 AGAUGGUAGAGCAGCGCUCCCGCCAAGUGCAAUGCGGGCCGCUACCCUAGGCCGCGGGCCUUCUUGAUCACCCAUCGACCCCGUCCAGGU 302 Query 216 AAGUAU 221 |||||| Sbjct 303 AAGUAU 308 >> URS00025BD94D_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.5e-27 Identity: 87.33% Query coverage: 67.87% Gaps: 2.00% Alignment: Query 43 UUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUA 133 ||| ||||| | ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| || | |||||||||| Sbjct 4 UUUGAAUUUG---AGUUGGCAGAGGCCGCGCGAACGCGUACCCCCUCUGUCACAAAUUAUGACGUCCACUCUCCAACAAGAGGAGAUGGUA 91 Query 134 AACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 |||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 92 GGCCAACGUGCUCGCCAAGUGCAAUGCGAGCCAUUGAUCUAGGCCACGGCCCUUCUUGA 150 >> URS00023E04AE_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC000264) E-value: 1.1e-26 Identity: 74.62% Query coverage: 89.14% Gaps: 0.00% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU 112 ||||| || ||| ||| | | |||||||| |||||||||||| |||||||||||||||||||||||||| ||| Sbjct 8649 CAACAACGCAGAUAAAACUUUGAGAGCUGAAUUGGGGCAGGGGUCGCGCGAACGCGAACCCCCUCUACCACAAAUUAUGACGUAGACU 8736 Query 113 CUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGU 200 || ||||||||| |||| || || || | |||||||||||| | || || ||||||| | | |||||||||||||| | Sbjct 8737 CUGCCACUUGGGCAGAUCUUAGGGCAGUGCCCCUCCCAAGUGCAAUGGAGGUCACUGUCCUAGGCCAUGACUCUUCUUGAUCGGCCAU 8824 Query 201 CGACCCCGUCCAGGUAAGUAU 221 |||||||||||||||||||| Sbjct 8825 AGACCCCGUCCAGGUAAGUAU 8845 >> URS00025E308E_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.4e-26 Identity: 86.49% Query coverage: 66.52% Gaps: 0.68% Alignment: Query 46 AAAUUU-AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA 135 |||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 3 AAAUUUUGAAGGAUCGACAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGAAGAUGGUGGA 93 Query 136 CCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 ||||||| |||||||||||||||||| ||| ||| |||||||| ||||||||| Sbjct 94 CCAACGCAUUCACCAAGUGCAAUGUGAACCACUGACCCAGGCCACGAGCCUUCUUGA 150 >> URS0002374718_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC006123) E-value: 2.4e-26 Identity: 80.22% Query coverage: 81.45% Gaps: 1.65% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCC--UCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 125 || ||||||||| |||||||| |||||| | ||||| ||||||| ||||||| |||| ||||| |||| |||| || |||||| Sbjct 3353 UAAAUUUAAAUUUUCUGGAUUGGCAG-GGCCGCACAAACGCAUACCCCCCAUCUACCAAAAAUCAUGACAUCCAUUCUCUCAAUUGGGG 3440 Query 126 AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGG 214 |||||||| | |||| |||||||||| |||||| |||||| | ||| ||||||||| |||||||| || | | || ||||||||||| Sbjct 3441 AGAUGGUAGAACAACACGCUCACCAAAUGCAAUUUGAGCCGUGGAUCUAGGCCACGACCCUUCUUUAUAAGUCAUCAGCCCCGUCCAGG 3529 Query 215 UAAG 218 || | Sbjct 3530 UAGG 3533 >> URS00023FDA94_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC006123) E-value: 2.4e-26 Identity: 80.22% Query coverage: 81.45% Gaps: 1.65% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCC--UCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 125 || ||||||||| |||||||| |||||| | ||||| ||||||| ||||||| |||| ||||| |||| |||| || |||||| Sbjct 3339 UAAAUUUAAAUUUUCUGGAUUGGCAG-GGCCGCACAAACGCAUACCCCCCAUCUACCAAAAAUCAUGACAUCCAUUCUCUCAAUUGGGG 3426 Query 126 AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGG 214 |||||||| | |||| |||||||||| |||||| |||||| | ||| ||||||||| |||||||| || | | || ||||||||||| Sbjct 3427 AGAUGGUAGAACAACACGCUCACCAAAUGCAAUUUGAGCCGUGGAUCUAGGCCACGACCCUUCUUUAUAAGUCAUCAGCCCCGUCCAGG 3515 Query 215 UAAG 218 || | Sbjct 3516 UAGG 3519 >> URS00023A46F1_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC027714) E-value: 5.6e-26 Identity: 75.38% Query coverage: 89.59% Gaps: 2.01% Alignment: Query 22 AGUAAACAAGAGGGAC-CAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGAC 105 || || ||||| ||||| || || | |||||||| |||||||||| ||||||| ||| ||| ||||||||||||| Sbjct 266676 AGAAAGCAAGAUCAUUGGAAAUUGUACCUUCA---AAUUGGCAAGGGCCGCGCGGACGCGUAACCCUACUAGCACAAAUUAUGAC 266757 Query 106 GUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUU 190 |||| |||||||||| |||||||||||| ||| | | | | |||||||||| || | | ||||||| | ||||||| Sbjct 266758 AUCCAUUCUCCCACUUAGGGAGAUGGUAAGCCAGCACUCCUCCGAAGUGCAAUGGAGGCUGCUAACCUAGGCCAUGAGCCUUCUU 266842 Query 191 GAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 ||| || | | |||||||||||||||||| Sbjct 266843 GAUAGGUCAUUGACCCCGUCCAGGUAAGU 266871 >> URS000257721A_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 2.4e-25 Identity: 92.42% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUAGCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUGGGCCAACGCACCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 ||||||||||||||||||| ||||||||| ||||||||| Sbjct 92 GUGCAAUGUGAGCCAUUGACCCAGGCCACGGGCCUUCUUGA 132 >> URS000254BC10_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 3.3e-25 Identity: 90.91% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||| |||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUACGACGUUCACUCUCCCACUUGGGGAGAUGAUAAGUCAACGCGCCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 |||||||||| ||||||| |||||||||| |||| |||| Sbjct 92 GUGCAAUGUGGGCCAUUGGCUUAGGCCACGGGCCUUGUUGA 132 >> URS00023B25D8_4641 Musa acuminata (dwarf banana) long non-coding RNA (MACU_LNC005446) E-value: 3.9e-25 Identity: 78.14% Query coverage: 82.35% Gaps: 2.19% Alignment: Query 40 AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 126 |||| | || | | | ||||||||||| |||||| ||||| |||||||||||| |||| ||||||||||||||||||| Sbjct 54425 GAUUUGAU---AUGGCAUUGUGUGGGGGCCGCGCGGACGCGUUCCCCCGAUACCACAAAUUACGACGCCCACUCUCCCACUUGGGGA 54508 Query 127 GAUGGUAAACCAACGCG-CUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 ||||||| | || | | | | ||| |||||||| | ||| || ||||||||| ||||||||||| |||||||||||||||| Sbjct 54509 GAUGGUAGAGCAGCUCAACCCCCCACGUGCAAUGGGGGCCGCUGCCCUAGGCCACGUGCCUUCUUGAUCACCCGUCGACCCCGUCCA 54595 Query 213 GGUAAGUAU 221 ||||||||| Sbjct 54596 GGUAAGUAU 54604 >> URS0002547AFB_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 5.4e-25 Identity: 90.91% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||| | |||| | |||||||| Sbjct 1 GCAGGGGCCACGCGAACGCGUACCCCCUCUACCACAAAUUAUGACAUCCAUUCUCCCACUUGGGAAGAUGGUAGAUCAACACACUCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 ||| |||| ||||||||||| ||||||||| |||||||||| Sbjct 92 GUGUAAUGCGAGCCAUUGAUCUAGGCCACGACCCUUCUUGA 132 >> URS00025AA996_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.8e-24 Identity: 90.91% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||| | |||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUUCACUCUCCCACUUGGGGAGAUGAUGGGCCAACGCACCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 |||||||||| |||||||| ||||||||| ||||||||| Sbjct 92 GUGCAAUGUGGGCCAUUGACCCAGGCCACGGGCCUUCUUGA 132 >> URS00009D2223_4577 Zea mays Zm_95 E-value: 3e-24 Identity: 88.97% Query coverage: 61.54% Gaps: 0.00% Alignment: Query 60 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||| Sbjct 1 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCACCCACCA 91 Query 151 AGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG 195 |||||||| | |||| || ||||||||| |||||||||| Sbjct 92 UGUGCAAUGCGGGCCACUGGCCUAGGCCACGAGGCUUCUUGAUCC 136 >> URS00023FF8F8_3641 Theobroma cacao (cacao) long non-coding RNA (TCAC_LNC000106) E-value: 1.2e-23 Identity: 76.80% Query coverage: 81.45% Gaps: 0.55% Alignment: Query 42 UUUUAAAUUUAGGUAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGG 131 |||| |||| |||| || |||||||||||| |||| |||||||| |||||||||||||||| |||||||||||||||||| Sbjct 456 GUUUAUAUUUCCAAAAUUGGGUAGGGGCCGCGCGCACGCAGGCCCCCUCUGCCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACCU 546 Query 132 UAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || || | || | | |||||||||| ||||| | ||||||| | |||| ||||||| || | |||||||||||||||||||| Sbjct 547 UAGACAGAUGCACCACCGAAGUGCAAUGGAGGCCAUCUACCUAGGCCAUGAGCCUUUUUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 636 >> URS000258638B_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 5.4e-23 Identity: 88.64% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||| ||| | |||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUUCACUCUCCCACUUGGGGAGAUGAUAGGCCAGCGCACCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 ||||||||| |||| | | ||||||||| ||||||||| Sbjct 92 AUGCAAUGUGGGCCACUAACUUAGGCCACGAGCCUUCUUGA 132 >> URS0002382C7D_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC001675) E-value: 6.8e-23 Identity: 75.14% Query coverage: 80.09% Gaps: 2.21% Alignment: Query 45 UAAAUUUAGG----UAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 127 |||||| || | ||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||| || Sbjct 23813 AAAAUUUGGGCUUAUGAUUGGUAGGGGCCGCGCGAACGCAGGCCCCCUCUAUCACAAAUUAUGACGUAGGCUCCACCACUUGGGUAG 23899 Query 128 AUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGG 214 | || | || | | | |||||||||| | ||| | ||||||| | |||||||||||| || | ||||||||||||| Sbjct 23900 ACCUUAGGCAGACACCCCUCCUAAGUGCAAUGGAGGUCAUCAACCUAGGCCAUAGGCCUUCUUGAUCGCCCAUUGACCCCGUCCAGG 23986 Query 215 UAAGUAU 221 ||||||| Sbjct 23987 UAAGUAU 23993 >> URS000258EC02_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 8.7e-23 Identity: 88.64% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | || |||| | |||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUUCAUUCUCCCACUUGGGGAGAUGAUGGGCCGACGCACCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 |||||||||| ||||| || ||||||||| ||||||||| Sbjct 92 GUGCAAUGUGGGCCAUCGACCCAGGCCACGGGCCUUCUUGA 132 >> URS00023D1402_3871 Lupinus angustifolius (narrow-leaved blue lupine) long non-coding RNA (LANG_LNC001377) E-value: 1.1e-22 Identity: 70.48% Query coverage: 87.33% Gaps: 8.10% Alignment: Query 29 AAGAGGGACCAAAUUU--------------UAAAUUUAG---GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAU 102 ||| ||||||| ||| |||||||| | | | |||||||||||||||||||| |||||||| |||||||||| Sbjct 200 AAGGUGGACCAAGUUUGAAGGCCGAUUAAACAAAUUUAGACUGGAUUGGGCAGGGGCCGCGCGAACGCAGGCCCCCUCUUUCACAAAUUAU 290 Query 103 GACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAU 193 ||| | |||| ||||||||| ||| || | | | | || | |||||||||| || || ||||||| || |||||||||| Sbjct 291 GACAUAGGCUCUACCACUUGGGUAGACCUUAGGCUAGCACCCUUCCAAAGUGCAAUGGAAGUCACAAGCCUAGGCCAUGGGCCUUCUUGAU 381 Query 194 CGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | || | |||||||||||||||||||| Sbjct 382 CACCCAUUGACCCCGUCCAGGUAAGUAU 409 >> URS000256471B_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.5e-22 Identity: 88.55% Query coverage: 59.28% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| | ||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCGCUUGGGGAGAUGGUAAGCCAGCGCACCCACCAU 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUG 191 |||||||||| |||| | |||||||||| |||| || Sbjct 92 GUGCAAUGUGGGCCACUAGCCUAGGCCACGGGUCUUCCUG 131 >> URS000252C33A_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.7e-22 Identity: 87.12% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 |||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||| ||| ||| |||||| Sbjct 1 GCAGAGGCUGCGCGAACGCGUAACCCCUCUACCAUAAAUUAUGACGUUCACUCUCCCGCUUGGGGAGAUGGUAAGCCAGCGCAUCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 ||||||||||| ||| | | |||||||| ||||||||||| Sbjct 92 GUGCAAUGUGAACCACUAACCUAGGCCACAGCCCUUCUUGA 132 >> URS00025B8EF3_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.8e-22 Identity: 88.64% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||| ||| | ||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUUCACUCUCCCACUUGGGGAGAUGAUAGGCCAGCGCACCCACCAC 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 |||||||||| |||| | | ||||||||| ||||||||| Sbjct 92 GUGCAAUGUGGGCCACUAACCUAGGCCACGAGCCUUCUUGA 132 >> URS00025C28C1_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 2.7e-22 Identity: 87.88% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUAUCACAAAUUAUGACGUCCACUCUCCCACUUGAGGAGAUGGUGGACCAGCGCAUCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 |||||||||| ||| ||| |||||||| ||||||||| Sbjct 92 GUGCAAUGUGGACCACUGACCCAGGCCACGAGCCUUCUUGA 132 >> URS00025B0B24_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 4.9e-22 Identity: 86.36% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUAUCCCCUCUACCAUAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAGCCAGCGCAUCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 ||||||||| ||| | |||||||| | |||||||| Sbjct 92 AUGCAAUGUGGACCACUAGCUUAGGCCACAACUCUUCUUGA 132 >> URS00025CFEBA_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.3e-21 Identity: 87.12% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| | | |||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUACGACGUCCACUCUCCCACUUGGGGAGAUGGUAGGCCAGCACAUCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 |||||||||| ||| | ||||||||| | |||||||| Sbjct 92 GUGCAAUGUGGACCACUAGCCUAGGCCACGACUCUUCUUGA 132 >> URS00025DB433_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.5e-21 Identity: 87.40% Query coverage: 57.47% Gaps: 0.00% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGC 155 ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||| | ||||||||| |||||||||| Sbjct 2 GGGCCGCGCGAACAUGUACCCCCUCUACCACAAAUUAUGACGUUCACUCUUCCACUUGGGAAGAUGAUGGGCCAACGCGCCCACCAAGUGC 92 Query 156 AAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUG 191 |||||| |||||||| ||||||||| ||||| || Sbjct 93 AAUGUGGGCCAUUGACCCAGGCCACGGGCCUUCGUG 128 >> URS0002387AEF_3983 Manihot esculenta (cassava) long non-coding RNA (MESC_LNC004221) E-value: 5.1e-23 Identity: 72.33% Query coverage: 90.95% Gaps: 2.91% Alignment: Query 21 AAGUAAACAAGAGGGACCAAAUUUUAAAUUUA----GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGAC 105 |||| | ||| | || | ||| ||| | | |||| ||||||||||||||||| |||||||| |||||||||| ||| Sbjct 1580 CGGUAAUC-AGAUGAACGUCAAAAUAACUUUGGUCUGAGAUUUGGUAGGGGCCGCGCGAACGCAGGCCCCCUCUGCCACAAAUUACGAC 1667 Query 106 GUCCACUCUCCC-ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAU 193 || ||||||| ||||||||||| || |||| | | | | |||||||||| | || ||| ||||||| || ||||| |||| Sbjct 1668 GUAGGCUCUCCCAACUUGGGGAGACCUUAGACCAGCACCCCUCCUAAGUGCAAUGGAGGUCACUGACCUAGGCCAUGGACCUUCCUGAU 1756 Query 194 CGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | | |||||||||||||||||||| Sbjct 1757 CACACAUUGACCCCGUCCAGGUAAGUAU 1784 >> URS00025A3AAA_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 2.4e-21 Identity: 87.12% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUGGGCCAGCGCAUCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 |||||||| ||| ||| |||||||| ||||||||| Sbjct 92 AUGCAAUGUUGACCACUGACCCAGGCCACGAGCCUUCUUGA 132 >> URS00023AD06F_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC007494) E-value: 2.8e-21 Identity: 72.73% Query coverage: 84.16% Gaps: 0.53% Alignment: Query 36 ACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUG 122 | | |||||| | ||| | | | ||||||||||||||||| || |||| ||||| |||||||||||||| ||| || ||||| Sbjct 9458 AAAAUAUUUUAGAAUUAAGAAUUGGGCAGGGGCCGCGCGAAUGCAGGCCCCUUCUACUACAAAUUAUGACGUAGGCUCAACCAACUUG 9545 Query 123 GGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUC 210 || || || | | | | |||||||||||| | || | ||||||| || ||||||||||| || | ||||||||| Sbjct 9546 GGCUGACCUUAGGCGGGCACCCCUCCCAAGUGCAAUGGAGGUCACCAACUUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCGUC 9633 Query 211 CAGGUAAGUAU 221 ||||||||||| Sbjct 9634 CAGGUAAGUAU 9644 >> URS000240E1F1_4039 Daucus carota (carrot) long non-coding RNA (DCAR_LNC005651) E-value: 5e-21 Identity: 72.83% Query coverage: 82.81% Gaps: 2.72% Alignment: Query 37 CCAAAUUUUAAAUUUAGGUAAUUGGCAG-GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 126 || | ||||| | |||||| | | || |||||||||| | ||| ||| ||||||||||||||| ||| ||||||||| | Sbjct 305 ACAGAGUUUAACUA----GAAUUGGUGGGGAGCUGCGCGAACGCAAGCUCCCCCUAGCACAAAUUAUGACGUAGGCUCCACCACUUGGGUA 391 Query 127 GAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAA 217 || || | | || || | ||||||||| |||| | | ||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct 392 GACCUUAGGCGAGAGCCCUUCCGGAGUGCAAUGGAAGCCUCUAACCUAGGCCAUGGCCCUUCUUGAUCAGCCAUCGACCCCGUCCAGGUAA 482 Query 218 GU 219 || Sbjct 483 GU 484 >> URS00025B6231_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 8.2e-21 Identity: 86.36% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| |||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUACGACGUCCACUCUCCCACUUGGGGAGAUGGUAGGCCAGCGCAUCCACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 |||||||||| ||| | || ||||| | |||||||| Sbjct 92 GUGCAAUGUGGACCACUAGCCCAGACCACGACUCUUCUUGA 132 >> URS0002395770_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC000982) E-value: 4e-23 Identity: 74.43% Query coverage: 79.64% Gaps: 3.98% Alignment: Query 46 AAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA 135 |||| || ||||| |||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||| |||| || Sbjct 496 GAAUU-------GGGGUAGGGGUCGCGCGGACGCGAACCCCCUCUACCACAAAUUAUGACGUAGACUCUGCCACUUGGGCAGAUCUUAGG 578 Query 136 CCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || || | | ||||||||| | || | | ||||||| || |||||||||||| || | ||||||||||||||||||| Sbjct 579 GCAGUGCCCCUCCUGAGUGCAAUGGAGGUCACUUCUCUAGGCCAUGGUCCUUCUUGAUCGACCAUACACCCCGUCCAGGUAAGUAU 664 >> URS00025B282C_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 1.1e-20 Identity: 87.22% Query coverage: 60.18% Gaps: 0.75% Alignment: Query 60 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||| Sbjct 1 GGCAGGGGCCGCGCGAACGCGUACC-CCUCUACCACAAAUUAUGACAUCCACUCUCCCACUUGGGGAGAUGGUGGGCCAGCGCAUCCACCA 90 Query 151 AGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 ||||||||||| ||| ||| |||||||| ||||||||| Sbjct 91 AGUGCAAUGUGGACCACUGACCCAGGCCACGAGCCUUCUUGA 132 >> URS00019A28CD_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.4e-20 Identity: 78.26% Query coverage: 72.85% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||| || || || ||| Sbjct 1 GCAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACCUUAGGGUGGUGCACUUUCCA 90 Query 151 AGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||||| |||||| ||||||| || ||||||||||| || | ||||||| |||||||||||| Sbjct 91 AGUGCAAUGAGAGCCACCAUCCUAGGCCAUGGGCCUUCUUGAUCCCCCAUUGACCCCGCCCAGGUAAGUAU 161 >> URS000242ECAF_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC004981) E-value: 4.2e-20 Identity: 72.73% Query coverage: 83.26% Gaps: 1.60% Alignment: Query 38 CAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU-UGG 123 || | || || | ||| | | ||| |||||||||||||||| ||||||| |||||||||||||| |||| |||| | | Sbjct 16669 AAAUUGUUGAACUAAGGAAUUGGGCGGGGGCCGCGCGAACGCAGGCCCCCUCAGGAACAAAUUAUGACGUAGGCUCUUUCACUGUAG 16755 Query 124 GGAGAUGGUAAACCAACGCGC--UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCG 208 | ||| |||| || | | | || | |||||||| | || |||| ||||||| | | || ||||||| ||| | ||||||| Sbjct 16756 GAAGACCUUAAAACAGCACCCCUCCAGUAUGUGCAAUGGAGGUCACUGAUCUAGGCCAUGACUCUGCUUGAUCAGCCAUUGACCCCG 16842 Query 209 UCCAGGUAAGUAU 221 ||||||||||||| Sbjct 16843 UCCAGGUAAGUAU 16855 >> URS00019A2A46_85681 Citrus clementina U1 spliceosomal RNA E-value: 4.4e-20 Identity: 78.26% Query coverage: 72.85% Gaps: 0.62% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||||||||||||||||||| | ||| ||||||||||||||||||| |||||||||||||||||| || || ||| ||| Sbjct 1 GCAGGGGCCGCGCGAACGCAGGC-CCCACUACCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACAUUAGGGUGGUGCACUCUCCA 89 Query 151 AGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||||| |||||| ||||||| || ||||| ||||| || | ||||||| |||||||||||| Sbjct 90 AGUGCAAUGAGAGCCACCAUCCUAGGCCAUGGACCUUCCUGAUCACCCAUUGACCCCGCCCAGGUAAGUAU 160 >> URS0002352EBA_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC000869) E-value: 6.7e-20 Identity: 71.43% Query coverage: 85.52% Gaps: 0.53% Alignment: Query 33 GGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 123 ||| |||||||| ||||| | | | ||||||||||||||||| |||| ||||||||||||||||||| ||| |||||||| Sbjct 20 AGGAGAAAAUUUUAGGUUUAG-AAUUGUGUAGGGGCCGCGCGAACGCAGGACCCCACUACCACAAAUUAUGACGUAGGCUCGACCACUUGG 109 Query 124 GGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGG 214 | || || | | | | | |||||||||| | || | ||||||| || ||| ||||||| || | |||||| |||||| Sbjct 110 GUCGACCUUAGGCAAGCACCCCUCUAAAGUGCAAUGAAGGUCACCAACCUAGGCCAUGGGUCUUAUUGAUCGCCCAUUGACCCCAUCCAGG 200 Query 215 UAAGUAU 221 ||||||| Sbjct 201 UAAGUAU 207 >> URS000241DF2A_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC002199) E-value: 9e-20 Identity: 71.28% Query coverage: 88.24% Gaps: 0.51% Alignment: Query 27 ACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 || |||| | || ||| | ||||| | || ||||||||||||||||| |||| ||||||||||||||||||| ||| Sbjct 827 GCAGGAGGCCCAAACGUUUGGACUUAGG-AUCGGGUAGGGGCCGCGCGAACGCAGGCCCCUACUACCACAAAUUAUGACGUAGGCUCGG 914 Query 116 CCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGAC 204 ||||||||| || || | | | | | | |||||||||| | || | ||||||| || ||| ||||||| || | ||| Sbjct 915 CCACUUGGGCCGACCUUAGGCUAGCACCCCUCCAAAGUGCAAUGGAGGUCACUAGCCUAGGCCAUGGGUCUUGUUGAUCGCCCAUUGAC 1003 Query 205 CCCGUCCAGGUAAGUAU 221 ||||||||||||||||| Sbjct 1004 CCCGUCCAGGUAAGUAU 1020 >> URS000236F241_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC007754) E-value: 1.4e-20 Identity: 73.68% Query coverage: 77.38% Gaps: 0.00% Alignment: Query 49 UUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA 135 ||| ||||| | |||||||||||||||| ||||| ||| ||||||||||||||| ||| ||||||||| || ||| Sbjct 11884 ACUAGAGAAUUGACGGGGGCCGCGCGAACGCAGGCCCCCACUAGCACAAAUUAUGACGUAGGCUCGACCACUUGGGCCGACCUUAAG 11970 Query 136 CCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | ||||| | | ||||||||| | | | ||||||| || ||||||||||| || | |||||||||||||||||| Sbjct 11971 CUAACGCCCCUCCUGAGUGCAAUGGAGGUCGCCAACUUAGGCCAUGGACCUUCUUGAUCAACCAUUGACCCCGUCCAGGUAAGU 12054 >> URS00019A2884_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.3e-19 Identity: 78.75% Query coverage: 72.40% Gaps: 0.63% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||| || || ||| ||| Sbjct 1 GCAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACCUUAGGGUGGUGCACUCUCCA 90 Query 151 AGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||| ||| || | ||||||| || ||||||||||| || ||||||||| ||||||||||| Sbjct 91 AGUGCAAUAAGAGUCACUAUCCUAGGCCAUGGGCCUUCUUGAUCC-CCAUCGACCCCGCCCAGGUAAGUA 159 >> URS0002381B87_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC015721) E-value: 5.9e-29 Identity: 79.57% Query coverage: 83.71% Gaps: 0.54% Alignment: Query 35 GACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU 121 || || ||| | |||| | ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||| | | Sbjct 91997 AACACAAAUUUUAGUUUAAAAACUUGGCAGGGGCCGCGCGAACGUGUACCCCCUCUAUCACAAAUUAUGACGUUCACUCUUUCUCAA 92083 Query 122 -GGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCC 207 || |||||||| | |||| | ||||| |||||||| | ||||||||||| ||||||| | |||| |||||| | | |||||| Sbjct 92084 AAGGAAGAUGGUAGAUCAACACACUCACAAAGUGCAACGCGAGCCAUUGAUCUAGGCCAUGAGCCUUAUUGAUCACUCAUAGACCCC 92170 Query 208 GUCCAGGUAAGU 219 |||||||||||| Sbjct 92171 GUCCAGGUAAGU 92182 >> URS000236DBB5_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002933) E-value: 2.5e-19 Identity: 70.44% Query coverage: 88.24% Gaps: 3.94% Alignment: Query 27 ACAAGAGGGACCAAAUUU----UAAAUUUA--GGUAAUUGGCA-GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGAC 105 | |||| | || || | ||||||| | | |||| | |||||||||||||||| ||||| || |||||||||||||| Sbjct 10219 AAUAGAGAGCCCGAAACUAAUAAAAAUUUAACGAGAGUUGGGAGGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGAC 10304 Query 106 GUCCACUCUCCCACUUGGG-GAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUU 190 || ||| |||||| || || || | || | |||||||||||| |||| | ||||||| || ||||| | Sbjct 10305 GUAGGCUCAACCACUUUGGGUUGACCUUAGGCGGGUGCACCUCCCAAGUGCAAUGGAGGCCACCAACCUAGGCCAUGGGCCUUCAU 10390 Query 191 GAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||| || | |||||||||||||||||||| Sbjct 10391 GAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 10421 >> URS00025B7B44_4565 Triticum aestivum partial small subunit ribosomal RNA E-value: 4.3e-19 Identity: 81.82% Query coverage: 59.73% Gaps: 0.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||||||||||||||||||||||||||||||| || |||||||||||| || ||||||||||||||||||| || | | | | ||||| Sbjct 1 GCAGGGGCCGCGCGAACGCGUACCCCCUCUAUCAUAAAUUAUGACGUUCAUUCUCCCACUUGGGGAGAUGAUAGGCGAGCACAUCAACCAA 91 Query 152 GUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 ||||||||| | || | ||||||| | |||||||||| Sbjct 92 GUGCAAUGUUGGUCACUAGCCUAGGCCAUGACCCUUCUUGA 132 >> URS00023C030F_180498 Jatropha curcas (J. curcas) long non-coding RNA (JCUR_LNC001971) E-value: 4.7e-19 Identity: 75.74% Query coverage: 76.02% Gaps: 1.18% Alignment: Query 54 GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUGGGGAGAUGGUAAACCAACG 141 || | ||||||||||||||||| ||||| || |||||||||||||||| ||||||| ||||||||||| || ||| | Sbjct 130 AUAUAGGACAGGGGCCGCGCGAACGUAGGCCCCCACUUCCACAAAUUAUGACGUAGGCUCUCCCAACUUGGGGAGACCUUAGACCGGCA 218 Query 142 CGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | ||| | |||||||||| | || | || ||| ||| | ||| |||||||| || | || ||||||||||||||||| Sbjct 219 CCCUC-CUAAGUGCAAUGGAGGUCACUAAUCUAGACCAUAGGCCUACUUGAUCGCCCAUUGAUCCCGUCCAGGUAAGUAU 297 >> URS00023E8B66_226208 Salvia miltiorrhiza (S. miltiorrhiza) long non-coding RNA (SMIL_LNC006541) E-value: 6.4e-19 Identity: 72.99% Query coverage: 78.73% Gaps: 2.30% Alignment: Query 48 AUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAAC 136 || | | | ||||||||| ||||| |||| |||||||||||||||||||||||||| || ||||||||| || || | Sbjct 132 AU---UGAAUUAGGCAGGGGCUGCGCGCACGCAAACCCCCUCUACCACAAAUUAUGACGUAAGUUCGACCACUUGGGUCGACUUUAGGC 217 Query 137 CAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | | ||| | |||||||||| | | | ||||||| | |||||| |||| || |||||||||||||||||||||| Sbjct 218 AAGCACCCUC-CUAAGUGCAAUGGAGGUUACAAACCUAGGCCAUGAGCCUUCUAGAUCAACCAUCGACCCCGUCCAGGUAAGUAU 301 >> URS0000A512DF_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 8.8e-19 Identity: 75.63% Query coverage: 72.40% Gaps: 0.00% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||||||||||||| || | | | | | ||| Sbjct 2 CAGGGGUCGCGCGAACGCAGACCCCCUCAACCACAAAUUAUGAUGUAGGCUCUCCCACUUGGGGAGACCUUAGGGUAGCACCCCUCCUAAG 92 Query 153 UGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||| || | | ||||||| | ||||| |||||| || | |||||| ||||||||||||| Sbjct 93 UGCAAUGGAAGUUACCAACCUAGGCCAUGAACCUUCCUGAUCGUCCAUAGACCCCAUCCAGGUAAGUAU 161 >> URS00023B2A45_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC007216) E-value: 1.5e-18 Identity: 69.95% Query coverage: 85.97% Gaps: 3.11% Alignment: Query 32 AGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA 118 | ||| | |||| | | || ||| ||||||||||||||||| ||||| || | |||||||||||||| |||| || Sbjct 13624 AAGGAAAAUAUUUA-GAC--UGAAAACUGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCUUCCU 13707 Query 119 CUUGGGG-AGAUGGUAAACCAACGCGC--UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCG 202 ||| ||| ||| || | || | | | || | |||||||| || | | ||||||| | | ||||||| || ||| | | Sbjct 13708 CUUAGGGAAGACCUUAGAACAGCACCCCUCCAGUAUGUGCAAUGGAGAUCACUACUCUAGGCCAUGACUCUUCUUGGUCAGCCAUUG 13794 Query 203 ACCCCGUCCAGGUAAGUAU 221 ||||||||||||||||||| Sbjct 13795 ACCCCGUCCAGGUAAGUAU 13813 >> URS00023C5B80_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC007216) E-value: 1.5e-18 Identity: 69.95% Query coverage: 85.97% Gaps: 3.11% Alignment: Query 32 AGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 120 | ||| | |||| | | || ||| ||||||||||||||||| ||||| || | |||||||||||||| |||| || || Sbjct 9434 AAGGAAAAUAUUUA-GAC--UGAAAACUGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCUUCCUCU 9519 Query 121 UGGGG-AGAUGGUAAACCAACGCGC--UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 | ||| ||| || | || | | | || | |||||||| || | | ||||||| | | ||||||| || ||| | ||||| Sbjct 9520 UAGGGAAGACCUUAGAACAGCACCCCUCCAGUAUGUGCAAUGGAGAUCACUACUCUAGGCCAUGACUCUUCUUGGUCAGCCAUUGACCC 9608 Query 207 CGUCCAGGUAAGUAU 221 ||||||||||||||| Sbjct 9609 CGUCCAGGUAAGUAU 9623 >> URS00023CF74A_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC007216) E-value: 1.5e-18 Identity: 69.95% Query coverage: 85.97% Gaps: 3.11% Alignment: Query 32 AGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 120 | ||| | |||| | | || ||| ||||||||||||||||| ||||| || | |||||||||||||| |||| || || Sbjct 3652 AAGGAAAAUAUUUA-GAC--UGAAAACUGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCUUCCUCU 3737 Query 121 UGGGG-AGAUGGUAAACCAACGCGC--UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 | ||| ||| || | || | | | || | |||||||| || | | ||||||| | | ||||||| || ||| | ||||| Sbjct 3738 UAGGGAAGACCUUAGAACAGCACCCCUCCAGUAUGUGCAAUGGAGAUCACUACUCUAGGCCAUGACUCUUCUUGGUCAGCCAUUGACCC 3826 Query 207 CGUCCAGGUAAGUAU 221 ||||||||||||||| Sbjct 3827 CGUCCAGGUAAGUAU 3841 >> URS00019A2A1F_85681 Citrus clementina U1 spliceosomal RNA E-value: 2.3e-18 Identity: 75.16% Query coverage: 72.85% Gaps: 2.48% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 |||||||||||||||| | ||||| || |||||||||||||||| |||||||||||||||||| || | ||| Sbjct 1 GCAGGGGCCGCGCGAAUGUAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACCUUAGGGCGG----UGUUCCA 86 Query 151 AGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||||| |||||| ||||||| || ||||||||||| || | ||||||| |||||||||||| Sbjct 87 AGUGCAAUGAGAGCCACCAUCCUAGGCCAUGGGCCUUCUUGAUCCCCCAUUGACCCCGCCCAGGUAAGUAU 157 >> URS00021CB651_158383 Olea europaea subsp. europaea non-coding RNA E-value: 4.2e-18 Identity: 69.27% Query coverage: 86.88% Gaps: 1.04% Alignment: Query 13 GGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUA 101 |||| | | | | ||| | | |||| || || | | |||||||||||||||||||||| ||||||||||||||||||| Sbjct 568 GGGCUCUUGGUUUUAAAUGAGCAUCAGACUUUUCAACUU--GAAUUUGGCAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUA 654 Query 102 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUU 190 |||||| ||| ||||||||| || || || ||| | | |||||||||| || || ||||||| || ||||||| Sbjct 655 UGACGUAGGCUCGACCACUUGGGCCGACCUUAGACAGGCGCCCCUCCUAAGUGCAAUGGAGAUCACCAAUCUAGGCCAUGGGCCUUCUU 743 Query 191 GAUCGGCCGUCGAC 204 |||| || | ||| Sbjct 744 GAUCACCCAUUGAC 757 >> URS000234A9BB_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001487) E-value: 9.4e-18 Identity: 71.68% Query coverage: 77.83% Gaps: 1.73% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUA 133 | | | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || ||||||||| || Sbjct 261614 UAAA--AUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAGACCAUA 261696 Query 134 AACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAG 218 || | | | | ||||||||| | || | ||||||| || || ||||||||| || | ||||| ||||||||||| Sbjct 261697 GACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCAGGUAAG 261781 Query 219 UAU 221 ||| Sbjct 261782 UAU 261784 >> URS000237D7EB_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001488) E-value: 9.4e-18 Identity: 71.68% Query coverage: 77.83% Gaps: 1.73% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUA 133 | | | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || ||||||||| || Sbjct 650265 UAAA--AUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAGACCAUA 650347 Query 134 AACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAG 218 || | | | | ||||||||| | || | ||||||| || || ||||||||| || | ||||| ||||||||||| Sbjct 650348 GACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCAGGUAAG 650432 Query 219 UAU 221 ||| Sbjct 650433 UAU 650435 >> URS0002383582_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001487) E-value: 9.4e-18 Identity: 71.68% Query coverage: 77.83% Gaps: 1.73% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUA 133 | | | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || ||||||||| || Sbjct 261582 UAAA--AUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAGACCAUA 261664 Query 134 AACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAG 218 || | | | | ||||||||| | || | ||||||| || || ||||||||| || | ||||| ||||||||||| Sbjct 261665 GACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCAGGUAAG 261749 Query 219 UAU 221 ||| Sbjct 261750 UAU 261752 >> URS00023ABEFB_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001487) E-value: 9.4e-18 Identity: 71.68% Query coverage: 77.83% Gaps: 1.73% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUA 133 | | | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || ||||||||| || Sbjct 261550 UAAA--AUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAGACCAUA 261632 Query 134 AACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAG 218 || | | | | ||||||||| | || | ||||||| || || ||||||||| || | ||||| ||||||||||| Sbjct 261633 GACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCAGGUAAG 261717 Query 219 UAU 221 ||| Sbjct 261718 UAU 261720 >> URS00023B9AB5_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001487) E-value: 9.4e-18 Identity: 71.68% Query coverage: 77.83% Gaps: 1.73% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUA 133 | | | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || ||||||||| || Sbjct 328664 UAAA--AUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAGACCAUA 328746 Query 134 AACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAG 218 || | | | | ||||||||| | || | ||||||| || || ||||||||| || | ||||| ||||||||||| Sbjct 328747 GACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCAGGUAAG 328831 Query 219 UAU 221 ||| Sbjct 328832 UAU 328834 >> URS00023ED959_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001487) E-value: 9.4e-18 Identity: 71.68% Query coverage: 77.83% Gaps: 1.73% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUA 133 | | | | | ||||||| |||||||||| ||||| ||| ||||||||||||| | |||||| || ||||||||| || Sbjct 261593 UAAA--AUUAGUCAGGGGCUGCGCGAACGCAGGCCCCCGCUAGCACAAAUUAUGACAUUGGCUCUCCUACGUUGGGGAGACCAUA 261675 Query 134 AACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAG 218 || | | | | ||||||||| | || | ||||||| || || ||||||||| || | ||||| ||||||||||| Sbjct 261676 GACUGGCACCCCUCCUGAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCCUCUUGAUCGCCCAUUGACCCUGUCCAGGUAAG 261760 Query 219 UAU 221 ||| Sbjct 261761 UAU 261763 >> URS00019A276A_85681 Citrus clementina U1 spliceosomal RNA E-value: 1e-17 Identity: 75.95% Query coverage: 71.49% Gaps: 0.00% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 |||||||||||||||| ||||| || |||||||||||||||| |||| || |||||| ||| ||| | || | |||||| Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUGCCUCUUGGGCAGACCUUAAGCGGGUGCACCUCCCAAGU 93 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| |||| | ||||||| || ||||| ||||| || | |||||||||||||||||||| Sbjct 94 GCAAUGGAGGCCACCAACUUAGGCCAUGGGCCUUCAUGAUCACCCAUUGACCCCGUCCAGGUAAGUAU 161 >> URS0000CFF8B4_3702 Arabidopsis thaliana (thale cress) ATSL294030 E-value: 1.5e-17 Identity: 69.61% Query coverage: 80.54% Gaps: 1.66% Alignment: Query 43 UUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUA 133 ||| | | | | ||| |||| |||||||||||| |||||||| |||||||| |||||| |||||||||||||||||| || Sbjct 68 UUUCAUGUAAAAAGAAUGGUAGGGACCGCGCGAACGCAGGCCCCCUCUGCCACAAAUAAUGACGCAGGCUCUCCCACUUGGGGAGACCUUA 158 Query 134 AACCAA---CGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | || | | | | |||||||| | || | |||||||| ||| |||||| || ||||||||||||||||||| Sbjct 159 AGCUAAGCACCCCUCCGUUAUGUGCAAUGGAGGUCACUAGCCUAGGCCACUCGUCUUAUUGAUCACAAGUUGACCCCGUCCAGGUAAGUA 248 >> URS0002354C5D_81985 Capsella rubella (C. rubella) long non-coding RNA (CRUB_LNC004625) E-value: 1.7e-17 Identity: 68.48% Query coverage: 81.90% Gaps: 3.26% Alignment: Query 40 AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 125 | ||||| | || ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | |||| Sbjct 19270 AGAUUUAAGACU---AAAAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAUGGGA 19352 Query 126 AGAUGGUAAACCAACGCGC---UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCG 208 ||| ||| | || | | | |||||||| | || | |||||||| |||||||||| || ||||||| Sbjct 19353 AGACCUUAAGCUAAGCACCCCUCCGUAAUGUGCAAUGGAGGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCACGAGUUGACCCCG 19438 Query 209 UCCAGGUAAGUA 220 |||||||||||| Sbjct 19439 UCCAGGUAAGUA 19450 >> URS0002360D1F_264402 Capsella grandiflora (C. grandiflora) long non-coding RNA (CGRA_LNC001402) E-value: 1.7e-17 Identity: 68.48% Query coverage: 81.90% Gaps: 3.26% Alignment: Query 40 AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 128 | ||||| | || ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | |||| ||| Sbjct 128 AGAUUUAAGACU---AAAAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAUGGGAAGA 213 Query 129 UGGUAAACCAACGCGC---UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGG 214 ||| | || | | | |||||||| | || | |||||||| |||||||||| || ||||||||||||| Sbjct 214 CCUUAAGCUAAGCACCCCUCCGUAAUGUGCAAUGGAGGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCACGAGUUGACCCCGUCCAGG 302 Query 215 UAAGUA 220 |||||| Sbjct 303 UAAGUA 308 >> URS000238A02E_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC012863) E-value: 2.4e-17 Identity: 69.49% Query coverage: 80.09% Gaps: 0.00% Alignment: Query 45 UAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA 135 | || | | | || ||||||||||||||||| ||||| || |||||||||||||||| ||| ||||| ||| | || Sbjct 252 UUUGUUGAUGACUUAGGUAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCGACCACUAGGGCCAACCUUAGG 342 Query 136 CCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | | | | |||||||||| | || | ||||||| ||| ||| ||||||| || | ||||| |||||||||||||| Sbjct 343 CGGGCACCCCUCCAAAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGCUCUUAUUGAUCGCCCAUUGACCCUGUCCAGGUAAGUAU 428 >> URS000241E3FF_3988 Ricinus communis (castor bean) long non-coding RNA (RCOM_LNC000238) E-value: 8.9e-21 Identity: 75.54% Query coverage: 81.00% Gaps: 2.72% Alignment: Query 43 UUUAAAUUUAGG---UAAUU-GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUGGG 124 | |||||| | | |||| | |||||||||||||||||| ||||| || |||||||||||||||| ||||||| ||||||| Sbjct 12209 UGUAAAUUGACGACUAAAUUGGUCAGGGGCCGCGCGAACGCUGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUCCCAACUUGGG 12295 Query 125 GAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCC 211 |||| || ||| | | | | |||||||||| | || | ||||||| || |||| |||||| || |||||||||||| Sbjct 12296 GAGACCUUAGGCCAGCACCCCUCCUAAGUGCAAUGGAGGUCACAAACCUAGGCCAUGGACCUUAUUGAUCACCCAUCGACCCCGUCC 12382 Query 212 AGGUAAGUAU 221 |||||||||| Sbjct 12383 AGGUAAGUAU 12392 >> URS00021D1069_158383 Olea europaea subsp. europaea non-coding RNA E-value: 6.3e-17 Identity: 71.60% Query coverage: 76.47% Gaps: 0.00% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 127 || || ||| | | | | | |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| | Sbjct 658 AACCUUCAAACUAAAGAAUUGGGCAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGACGUAGGCUCGACCACUUGGGCCG 746 Query 128 AUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCC 207 | || | ||| | | |||||||||| | | | ||||||| || ||||||||||| || | |||||| Sbjct 747 ACCUUAGGCGGGCGCCCCUCCUAAGUGCAAUGGAGGUCGCCAACCUAGGCCAUGGGUCUUCUUGAUCGCCCAUUGACCCC 826 >> URS00023CF971_3888 Pisum sativum (pea) long non-coding RNA (PSAT_LNC039773) E-value: 8e-17 Identity: 68.98% Query coverage: 84.16% Gaps: 0.53% Alignment: Query 36 ACCAAAUUUUAAAUUUAGGUAAUUGGCAG-GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 125 | ||||| || | | |||||| || ||||||||||||||| ||||| | | ||||||||||| || ||| ||||||||| Sbjct 155 AACAAAUAUUUAGUAACUUCAAUUGGGAGGGGGCCGCGCGAACGCAGGCCCCCACAGCAACAAAUUAUGAUGUAGGCUCCACCACUUGGGU 245 Query 126 AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUA 216 ||| || | | | | | | |||||||||| | || | ||||||| | |||| ||||| || | |||||| |||||||| Sbjct 246 AGACCUUAGGCUAGCACCCCUCCUAAGUGCAAUGGAGGUCACUUGCCUAGGCCAUAGACCUUGAUGAUCAUCCAUUGACCCCAUCCAGGUA 336 Query 217 AGUAU 221 ||||| Sbjct 337 AGUAU 341 >> URS0000A2B30F_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 8.1e-17 Identity: 73.58% Query coverage: 71.95% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 |||||||||||||||| |||||||| ||||||||||||| || |||| ||||||| ||| || | | | | | | |||| Sbjct 3 GGGGGCCGCGCGAACGCAGGCCCCCUCUGCCACAAAUUAUGAUGUAGGCUCUAUCACUUGGACAGACCUUAGAAUAGCACCCCUCCUAAGU 93 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | || | ||||||| || ||||||||||| || | |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCACUACCCUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS0002197E17_158383 Olea europaea subsp. europaea non-coding RNA E-value: 8.1e-17 Identity: 68.48% Query coverage: 83.26% Gaps: 1.09% Alignment: Query 24 UAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU 112 || || | ||||| |||| || | |||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct 207 UAUUUAAACCGCUUAAAAUUCUAAACUUG--AUUUGGGCAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGACGUAGGCU 293 Query 113 CUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUC 201 | ||||||||| || || || ||| | | | |||||||| | | || ||||||| | ||||||||||| || | Sbjct 294 CGACCACUUGGGCCGACCUUAGACGGGCGCCCCUCCUAGGUGCAAUGGAGGUCGCCAAUCUAGGCCAUGAGCCUUCUUGAUCACCCAUU 382 Query 202 GACCCC 207 |||||| Sbjct 383 GACCCC 388 >> URS0002187239_50452 Arabis alpina U1 spliceosomal RNA E-value: 8.6e-17 Identity: 72.39% Query coverage: 72.40% Gaps: 1.84% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUCAC 148 |||||| |||||||||| |||||||| ||||||||| |||||| ||| ||||||||| ||| ||| | | | | | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCGACCACAAAUAAUGACGCAGGUUCUUCCACUUGGGAAGACCUUAAGCAUAGCACCCUUCCUU 91 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | |||||||| || || | |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 92 UACGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUUCUUCUUGAUCGAGAGUCGACCCCGUCCAGGUAAGUAU 164 >> URS0000A73A73_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 9.1e-17 Identity: 74.21% Query coverage: 71.95% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||||||||||||||||| ||||| |||||||||||||||| || |||| |||||||| ||| |||| | | | | | |||| Sbjct 3 AGGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUAUGAUGUAGGCUCUGCCACUUGGACAGACCUUAAAGAAGCACCCCUCCUAAGU 93 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | || | ||||||| || |||| ||||| || | |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCACUCCCCUAGGCCAUGGACCUUAUUGAUUAUCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS0000A41445_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 9.7e-17 Identity: 73.75% Query coverage: 71.95% Gaps: 0.63% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||||| |||||||||| |||| || ||||||||||||| || |||||| ||||| ||||| || | ||| | | |||||| Sbjct 3 AGGGGUUGCGCGAACGCAGGCCCCUACUGCCACAAAUUAUGAUGUAGGCUCUCCUACUUGAGGAGACCUUAGAUUAACACCCCUCCCAAGU 93 Query 154 GCAAUGUGAGCCAUUG-AUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | ||| || ||||||| || |||| ||||| || | |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCAUCAAAUCUAGGCCAUGGACCUUAAUGAUCAUCCAUUGACCCCAUCCAGGUAAGUAU 162 >> URS000239921B_226208 Salvia miltiorrhiza (S. miltiorrhiza) long non-coding RNA (SMIL_LNC006540) E-value: 6.4e-19 Identity: 72.99% Query coverage: 78.73% Gaps: 2.30% Alignment: Query 48 AUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAAC 136 || | | | ||||||||| ||||| |||| |||||||||||||||||||||||||| || ||||||||| || || | Sbjct 459 AU---UGAAUUAGGCAGGGGCUGCGCGCACGCAAACCCCCUCUACCACAAAUUAUGACGUAAGUUCGACCACUUGGGUCGACUUUAGGC 544 Query 137 CAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | | ||| | |||||||||| | | | ||||||| | |||||| |||| || |||||||||||||||||||||| Sbjct 545 AAGCACCCUC-CUAAGUGCAAUGGAGGUUACAAACCUAGGCCAUGAGCCUUCUAGAUCAACCAUCGACCCCGUCCAGGUAAGUAU 628 >> URS0000D4061F_3702 Arabidopsis thaliana (thale cress) ATSL005080 E-value: 2.1e-16 Identity: 70.83% Query coverage: 74.21% Gaps: 2.98% Alignment: Query 57 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGC--- 144 | ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | ||| ||| ||| | || | Sbjct 16 AAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAAGGGAAGACCUUAAGCA-UAGCACCCU 105 Query 145 -UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | |||||||| || || | |||||||| ||||||||||| || ||||||||||||||||||| Sbjct 106 UCCGGUAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCGUCCAGGUAAGUA 182 >> URS0000A33835_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 2.1e-16 Identity: 74.21% Query coverage: 71.95% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||||||||||||||||| ||||| ||||||||||||||||||| |||| | ||||| ||| || | | | | | |||||| Sbjct 3 AGGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUAUGACGUAGGCUCUGUCUCUUGGACAGACCUUAGGCUAGCACCCCUCCCAAGU 93 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | || ||||||| || |||| |||||| || | |||||||||||||||||||| Sbjct 94 GCAAUGGAGGUCACCAGCCUAGGCCAUGGGCCUUGUUGAUCACCCAUUGACCCCGUCCAGGUAAGUAU 161 >> URS00023711DB_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC011668) E-value: 3.7e-17 Identity: 72.28% Query coverage: 81.90% Gaps: 2.72% Alignment: Query 41 AUUUUAAAUUUAGGUAAUUG--GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGG 124 |||||||| | ||||| | ||| ||||||||||||| ||||| | | |||||||||||||| |||||| || ||| | Sbjct 46665 AUUUUAAAAACUG--AAUUGAUGAAGGAGCCGCGCGAACGCAGGCCCCCACAGCAACAAAUUAUGACGUUGGCUCUCCUACGUUGAG 46749 Query 125 GAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCC 211 |||| ||| | | | | | | |||||||||| | || ||||||| | |||||||||||| || | |||||||||| Sbjct 46750 GAGACCAUAAGCAAGCACCCCUCCUAAGUGCAAUGGAGGUCACCAGCCUAGGCCAUGAGCCUUCUUGAUCGCCCAUUGACCCCGUCC 46836 Query 212 AGGUAAGUAU 221 |||||||||| Sbjct 46837 AGGUAAGUAU 46846 >> URS000237332E_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC011669) E-value: 3.7e-17 Identity: 72.28% Query coverage: 81.90% Gaps: 2.72% Alignment: Query 41 AUUUUAAAUUUAGGUAAUUG--GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGG 124 |||||||| | ||||| | ||| ||||||||||||| ||||| | | |||||||||||||| |||||| || ||| | Sbjct 39775 AUUUUAAAAACUG--AAUUGAUGAAGGAGCCGCGCGAACGCAGGCCCCCACAGCAACAAAUUAUGACGUUGGCUCUCCUACGUUGAG 39859 Query 125 GAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCC 211 |||| ||| | | | | | | |||||||||| | || ||||||| | |||||||||||| || | |||||||||| Sbjct 39860 GAGACCAUAAGCAAGCACCCCUCCUAAGUGCAAUGGAGGUCACCAGCCUAGGCCAUGAGCCUUCUUGAUCGCCCAUUGACCCCGUCC 39946 Query 212 AGGUAAGUAU 221 |||||||||| Sbjct 39947 AGGUAAGUAU 39956 >> URS0002387CE9_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC011668) E-value: 2.6e-16 Identity: 70.49% Query coverage: 81.90% Gaps: 2.19% Alignment: Query 41 AUUUUAAA-UUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGG 125 |||| ||| | | | | | ||||||||||||||||| ||||| | | ||||||||||||| |||||| || ||| || Sbjct 44135 AUUUCAAAACUGAAUUGA--UGAAGGGGCCGCGCGAACGCAGGCCCCCACAGCAACAAAUUAUGACGCUGGCUCUCCUACGUUGAGG 44219 Query 126 AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 ||| || | | | | | | |||||||||| | || |||| || | |||||||||||| || ||||||||||||| Sbjct 44220 AGACCAUAGGCAAGCACCCCUCCUAAGUGCAAUGGAGGUCACCAGCCUAGGACAUGAGCCUUCUUGAUCGCCCAUCGACCCCGUCCA 44306 Query 213 GGUAAGUAU 221 ||||||||| Sbjct 44307 GGUAAGUAU 44315 >> URS0000A6E1C9_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 2.7e-16 Identity: 73.58% Query coverage: 71.95% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||||||||||||||||| ||| | |||||||||||||||| || |||| ||||||| ||| || | | | | || | |||| Sbjct 3 AGGGGCCGCGCGAACGCAGGCCCACACUACCACAAAUUAUGAUGUAGGCUCUGUCACUUGGACAGACCUUAGAAAAGCACCCUUCCUAAGU 93 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | || | ||||||| || |||| |||||| || | |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCACUCCCCUAGGCCAUGGACCUUAUUGAUCAUCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS000218749B_50452 Arabis alpina U1 spliceosomal RNA E-value: 2.8e-16 Identity: 72.22% Query coverage: 71.95% Gaps: 1.85% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUCAC 148 |||||| |||||||||| ||||||||| |||||||| | ||||| |||| ||||||||| ||| ||| | | | | | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAACGACGUAGGCUCUUCCACUUGGGAAGACCUUAAGCAUAGCACCCUUCCGA 91 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||| || || | |||||||| ||||||||||| || ||||||||||||||||||| Sbjct 92 UAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS00023CDD66_81985 Capsella rubella (C. rubella) long non-coding RNA (CRUB_LNC002097) E-value: 3.3e-16 Identity: 69.57% Query coverage: 82.35% Gaps: 3.26% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 124 ||| || ||| | || | ||| |||||| ||||| |||| ||||||||| |||||||| |||||| |||| || | ||| Sbjct 28614 AAAGUUAAAACUAAG---AAUGGUAGGGGCUGCGCGGACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCUCAAGGG 28696 Query 125 GAGAUGGUAAACCAACGCGC--UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCG 208 ||| ||| | | | | | |||||||||| | || | |||||||| ||||||||||| || ||||||| Sbjct 28697 AAGACCUUAAGCUUAGCACCCCACGUUAUGUGCAAUGUG-GUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCG 28781 Query 209 UCCAGGUAAGUA 220 |||||||||||| Sbjct 28782 UCCAGGUAAGUA 28793 >> URS0000A19A08_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 3.4e-16 Identity: 72.33% Query coverage: 71.95% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||||| |||||||||| ||||| |||||||||||||||| || |||||| |||| ||||| || | ||| | | | |||| Sbjct 3 AGGGGUUGCGCGAACGCAGGCCCCCGCUACCACAAAUUAUGAUGUAGGCUCUCCUACUUAAGGAGACCUUAGGCUAACACCCCUCCUAAGU 93 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | ||| || ||||||| || | ||||| || | |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCAUCAAUCUAGGCCAUGGACUCAAAUGAUCAUCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS0002187390_50452 Arabis alpina U1 spliceosomal RNA E-value: 3.9e-16 Identity: 71.43% Query coverage: 71.49% Gaps: 1.86% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUCAC 148 |||||| |||||||||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||| | | | | | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGCUGGCUCUUCCACUUGGGAAGACCUUAAGCAUAGCACCCUUCCGU 91 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | |||||||| || || | |||||||| |||||||||| || |||||||||||||||||| Sbjct 92 UAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUUUUCUUCUUGAUCAAGAGUUGACCCCGUCCAGGUAAGU 162 >> URS0002187163_50452 Arabis alpina U1 spliceosomal RNA E-value: 4.4e-16 Identity: 72.05% Query coverage: 71.49% Gaps: 1.86% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUCAC 148 |||||| |||||||||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||| | | | | | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGCAUAGCACCCUUCCGU 91 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | |||||||| || || | |||||||| ||||||||||| || |||||||||||||||||| Sbjct 92 UAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCGUCCAGGUAAGU 162 >> URS0002396AC0_37334 Citrus maxima (C. maxima) long non-coding RNA (CMAX_LNC001524) E-value: 4.9e-16 Identity: 72.09% Query coverage: 76.47% Gaps: 2.91% Alignment: Query 52 AGGUAAUUGGCAG-GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAAC 140 || | ||| || || |||||||||| |||| ||||||||||||||||||| || ||||| | |||||||| || | | Sbjct 285 AGCGAGUUGCGAGGGGAUUGCGCGAACGCAGU-CCCCACUACCACAAAUUAUGACGUACAGUCUCC-UCAGAGGGAGAUGUUAGGCUAGU 372 Query 141 GCGCUCACC--AAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || | || ||||||||| ||||| ||||||| || ||||||||||| || ||||||||||||||||| ||| Sbjct 373 GCACAUCCCUUGAGUGCAAUGGAAGCCACAAGCCUAGGCCAUGGGCCUUCUUGAUCACCCAUCGACCCCGUCCAGGUAUGUA 454 >> URS00019A274C_85681 Citrus clementina U1 spliceosomal RNA E-value: 5.3e-16 Identity: 74.84% Query coverage: 71.49% Gaps: 0.63% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG-AGAUGGUAAACCAACGCGCUCACCAAG 152 |||||||||||||||| ||||| || |||||||||||||||| ||| |||||| ||| || || | || | ||||| Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCAACCACUUUGGGUUGACCUUAGGCGGGUGCACCUCCCAAG 93 Query 153 UGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||| |||| | ||||||| || ||||| |||||| || | |||||||||||||||||||| Sbjct 94 UGCAAUGGAGGCCACCAACCUAGGCCAUGGGCCUUCAUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 162 >> URS00021876D2_50452 Arabis alpina U1 spliceosomal RNA E-value: 5.3e-16 Identity: 72.05% Query coverage: 71.49% Gaps: 1.86% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUCAC 148 |||||| |||||||||| ||||||||| |||||||| | ||||| |||| ||||||||| ||| ||| | | | | | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAACGACGUAGGCUCUUCCACUUGGGAAGACCUUAAGCAUAGCACCCUUCCGA 91 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | |||||||| || || | |||||||| ||||||||||| || |||||||||||||||||| Sbjct 92 UAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCGUCCAGGUAAGU 162 >> URS00009EB43F_3981 Hevea brasiliensis miscellaneous RNA E-value: 7.7e-16 Identity: 70.06% Query coverage: 77.38% Gaps: 3.39% Alignment: Query 37 CCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA------CUCUCCCACUU 121 |||||||||| | | | | || |||||||||||||| ||||| ||||||||||||||||||| ||||||||||| Sbjct 61 CCAAAUUUUAGAAAUGAUACAGAGAUAGAGGCCGCGCGAACGCAGGCCCCCCCUACCACAAAUUAUGACGUAGGCUCUCCCUCUCCCACUU 151 Query 122 GGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCC 207 ||||||| || |||| | | | ||| |||||||| | || | || ||| ||| | || ||||||||| || | || ||| Sbjct 152 GGGGAGACCUUAGACCAGCACCCCUCCCAUGUGCAAUGGAGGUCACUCAUCUAGACCAUGAGCCCUCUUGAUCGCCCAUAGAUCCC 237 >> URS0000A69F09_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 7.9e-16 Identity: 74.05% Query coverage: 71.49% Gaps: 0.63% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUG 154 |||||||||||||||| | ||| |||||||||||||||| || |||||| ||||| ||||| || || | | | | ||||| Sbjct 4 GGGGCCGCGCGAACGCAGGC-CCCACUACCACAAAUUAUGAUGUAGGCUCUCCUACUUGAGGAGACCUUAGGCCUGCACCCCUCCAAAGUG 93 Query 155 CAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||| | || ||||||| || ||||||||||| || | |||||| ||||||||||||| Sbjct 94 CAAUGGAGGUCACAAUCCUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 160 >> URS00021874AE_50452 Arabis alpina U1 spliceosomal RNA E-value: 1e-15 Identity: 71.60% Query coverage: 71.95% Gaps: 1.85% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUCAC 148 |||||| |||||||||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||| | | | | | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGCAUAGCACCCUUCCUU 91 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||| || || | |||||||| |||||||||| || ||||||||||||||||||| Sbjct 92 UAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS0000A1DEE2_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 1.1e-15 Identity: 72.96% Query coverage: 71.95% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||||||||||||||||| ||||| |||||||||||||||| || ||||| ||||||| ||| || | | | | | |||| Sbjct 3 AGGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUAUGAUGUAGACUCUAUCACUUGGACAGACCUUAGAGAAGCAGCCCUCCUAAGU 93 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | || | ||||||| || |||| ||||| || | |||||| ||||||||||||| Sbjct 94 GCAAUGGAGGUCACUCCCCUAGGCCAUGGACCUUAGUGAUCAUCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS000237F1A5_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC001996) E-value: 7.2e-16 Identity: 69.66% Query coverage: 80.09% Gaps: 0.56% Alignment: Query 39 AAAUUUUAAAUUUAGGUAA-UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 124 ||| |||| | | || | |||||||||||||||||||| ||||| || |||||||||||| || ||| || |||||| Sbjct 71903 AAAACUUAAGUGAAUAAAAUUAGGCAGGGGCCGCGCGAACGCAGGCCCCCACUGGCACAAAUUAUGAUGUAGGCUCGACCUCUUGGG 71989 Query 125 GAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCC 211 || || | | | | || | |||||||||| || || | ||||||| || || |||||| | || | |||||| ||| Sbjct 71990 CCGACCUUAGAUUAGCACCCUUCCAAAGUGCAAUGGAAGUCACUAGCCUAGGCCAUGGGCCAUCUUGACCACCCAUUGACCCCAUCC 72076 Query 212 AGGU 215 |||| Sbjct 72077 AGGU 72080 >> URS000241158D_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC001996) E-value: 7.2e-16 Identity: 69.66% Query coverage: 80.09% Gaps: 0.56% Alignment: Query 39 AAAUUUUAAAUUUAGGUAA-UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 124 ||| |||| | | || | |||||||||||||||||||| ||||| || |||||||||||| || ||| || |||||| Sbjct 15956 AAAACUUAAGUGAAUAAAAUUAGGCAGGGGCCGCGCGAACGCAGGCCCCCACUGGCACAAAUUAUGAUGUAGGCUCGACCUCUUGGG 16042 Query 125 GAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCC 211 || || | | | | || | |||||||||| || || | ||||||| || || |||||| | || | |||||| ||| Sbjct 16043 CCGACCUUAGAUUAGCACCCUUCCAAAGUGCAAUGGAAGUCACUAGCCUAGGCCAUGGGCCAUCUUGACCACCCAUUGACCCCAUCC 16129 Query 212 AGGU 215 |||| Sbjct 16130 AGGU 16133 >> URS000239B489_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC004136) E-value: 1.3e-15 Identity: 68.81% Query coverage: 90.50% Gaps: 4.46% Alignment: Query 20 UAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 |||| ||||| | | | |||| | | ||| | | || ||||||||||||||||| | ||| || |||||||||||||||| Sbjct 9569 UAAGGAAACAGG------CUAUGUUUAGACUAAGGAAUUGGGUAGGGGCCGCGCGAACGCAGGC-CCCACUGCCACAAAUUAUGACGU 9649 Query 108 CCACUCUCCCACUUGGGGAGAUGGUAAACCAACGC-GCUCACCAAGUGCAAUGUGAGCCAUU-GAUGUAGGCCACGGCCCUUCUUGAU 193 ||| |||||||| || | | | | | ||| | |||||||||| | || | | |||||| | | |||||||| Sbjct 9650 AGGCUCGGCCACUUGGACCGACCUUGGGCUAGCACCCCUCCCGAAGUGCAAUGGAGGUCACUAGGCCCAGGCCAUGAGCUUUCUUGAU 9737 Query 194 CGGCCGUCGACCCCGUCCAGGUAAGU 219 | || | |||||||||||||||||| Sbjct 9738 AGCCCAUUGACCCCGUCCAGGUAAGU 9763 >> URS00019A275F_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.4e-15 Identity: 74.84% Query coverage: 71.49% Gaps: 0.63% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG-AGAUGGUAAACCAACGCGCUCACCAAG 152 |||||||||||||||| ||||| || |||||||||||||||| ||| |||||| ||| || || | || | ||||| Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCAGCCACUUUGGGCUGACCUUAGGCGGGUGCACCUCCCAAG 93 Query 153 UGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||| |||| | ||||||| || ||||| |||||| || | |||||||||||||||||||| Sbjct 94 UGCAAUGGAGGCCACCAACCUAGGCCAUGGGCCUUCAUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 162 >> URS00023C2221_264402 Capsella grandiflora (C. grandiflora) long non-coding RNA (CGRA_LNC001402) E-value: 1.6e-15 Identity: 70.91% Query coverage: 73.30% Gaps: 1.82% Alignment: Query 59 UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGC--- 144 ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | |||| ||| ||| | || | Sbjct 1 UGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAUGGGAAGACCUUAAGCUAAGCACCCCU 89 Query 145 UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | |||||||| | || | |||||||| |||||||||| || ||||||||||||||||||| Sbjct 90 CCGUAAUGUGCAAUGGAGGUCACUAGCCUAGGCCACUCGUCUUCUUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 165 >> URS0000A2299B_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 1.8e-15 Identity: 72.15% Query coverage: 71.49% Gaps: 0.00% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUG 154 ||||||||||||||| |||||||| ||||||||||||| || |||| ||||||| ||| || | | | | | | ||||| Sbjct 4 AGGGCCGCGCGAACGCAGGCCCCCUCUGCCACAAAUUAUGAUGUAGGCUCUAUCACUUGGACAGACCUUAGAAUAGCACCCCUCCUAAGUG 94 Query 155 CAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||| | || | ||||||| || |||| ||| || || | |||||| ||||||||||||| Sbjct 95 CAAUGGAGGUCACUACCCUAGGCCAUGGGCCUUUUUGGUCACCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS0002396D4D_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC004135) E-value: 2e-15 Identity: 69.44% Query coverage: 81.00% Gaps: 1.67% Alignment: Query 41 AUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGA 128 | || || ||||| | ||||||||| |||||||||| ||||| | | |||||||||||| | ||||||| || ||| ||||| Sbjct 836 AGUUGAACUUUAGA--UUGGGCAGGGGCUGCGCGAACGCAAGCCCCCACGGCAACAAAUUAUGACAUUGACUCUCCUACAUUGAGGAGA 922 Query 129 UGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAA 217 | || | | | | | |||||||||| | || |||||| |||||||||||| | | ||||| |||||||||| Sbjct 923 UCAUAGGCAGGCACCCCUUCAAAGUGCAAUGAAGGUCACCAGCCCAGGCCAUAAGCCUUCUUGAUCGCUCAUAGACCCUGUCCAGGUAA 1011 Query 218 GU 219 || Sbjct 1012 GU 1013 >> URS00023B016C_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC004134) E-value: 2.4e-16 Identity: 66.83% Query coverage: 90.95% Gaps: 1.95% Alignment: Query 20 UAAGUAAACAAGAGGGACCA---AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 |||| ||| | | ||||| |||| | | | | ||||||||| |||||||||| ||||| | | |||||||||||| | Sbjct 57 UAAGGAAAACAUAUAGACCAUCAAAUUCAUAUUCUUUAGUUUGGGCAGGGGCUGCGCGAACGCAAGCCCCCACGGCAACAAAUUAUGACAU 147 Query 108 CCACUCUCCCAC-UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGC 197 ||||||| || ||| |||||| || | | | | | ||||||||| | || |||||| | |||||||||||| Sbjct 148 UGACUCUCCUACAUUGAGGAGAUCAUAGGCAGGCACCCCUUCAGAGUGCAAUGAAGGUCACCAGCCCAGGCCAUGAGCCUUCUUGAUCGCU 238 Query 198 CGUCGACCCCGUCCAGGUAAGUA 220 | | ||||| ||||||||||||| Sbjct 239 CAUAGACCCUGUCCAGGUAAGUA 261 >> URS000241642D_180498 Jatropha curcas (J. curcas) long non-coding RNA (JCUR_LNC001192) E-value: 2.1e-15 Identity: 73.25% Query coverage: 71.04% Gaps: 0.00% Alignment: Query 57 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACG 141 ||| |||||||||||||||||| ||||| || |||||||||| ||||| |||||||||||||||||| || | | Sbjct 16171 CUUGACAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUACGACGUAGGCUCUCCCACUUGGGGAGACCUUAGGACGGCA 16255 Query 142 CGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAG 213 | | | ||||||||| | | | | ||||||| | |||| |||||| || |||||||||||||| Sbjct 16256 CCCCUUCAGAGUGCAAUGAAGGUCGCUAACCUAGGCCAUAGGCCUUAUUGAUCACCCAUCGACCCCGUCCAG 16327 >> URS00021CBAAA_158383 Olea europaea subsp. europaea non-coding RNA E-value: 2.5e-15 Identity: 71.01% Query coverage: 76.47% Gaps: 1.78% Alignment: Query 36 ACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 122 || |||||| || || | | |||| ||||||||||||||| ||||||||||||||||||||||| | ||| ||||||| Sbjct 1187 ACAAAAUUUCAACUUGA---UUUGGGCACGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGACAUAGGCUCAACCACUUG 1270 Query 123 GGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGAC 204 || || || || || | | | |||||||||| | | || ||||||| || |||| ||||||| || | ||| Sbjct 1271 GGCCGACCUUAGACGGACACCCCUCCUAAGUGCAAUGGAGGUCGCCAAUCUAGGCCAUGGGCCUUAUUGAUCGCCCAUUGAC 1352 >> URS0000A5F3B8_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 2.7e-15 Identity: 72.33% Query coverage: 71.95% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 |||| | |||||||||| |||| ||||||||||||||| || ||||| ||||||||| ||| || | ||| | | | |||| Sbjct 3 AGGGACUGCGCGAACGCAAGCCCCUAUUACCACAAAUUAUGAUGUAGACUCUGCCACUUGGGCAGACCUUAGAGAAACACCCCUCCUAAGU 93 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | || | ||||||| | | ||||||||| || | |||||| || |||||||||| Sbjct 94 GCAAUGGAGGUCACUCCCCUAGGCCAUAGGCAUUCUUGAUCACCCAUUGACCCCAUCUAGGUAAGUAU 161 >> URS00021CF782_158383 Olea europaea subsp. europaea non-coding RNA E-value: 3e-15 Identity: 70.00% Query coverage: 76.92% Gaps: 0.00% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 127 ||||| | | | | | |||||||||||||||||||| ||||| ||||||||||||| ||||| ||| ||||||||| | Sbjct 587 UCAUUUUGUACUAACAGAUUGGGCAGGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUACGACGUAGGCUCGACCACUUGGGCCG 675 Query 128 AUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCG 208 | || | | | | | |||||||||| || || | ||||||| || ||||||||||| || | ||||||| Sbjct 676 ACCUUAGGCGGGCACCCCACCUAAGUGCAAUGGAAGUCACCAACCUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCG 756 >> URS00021874C4_50452 Arabis alpina U1 spliceosomal RNA E-value: 4.1e-15 Identity: 71.78% Query coverage: 71.95% Gaps: 3.07% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACC-- 149 |||||| ||||| |||| |||||||| |||||||| |||||| |||| ||||||||| ||| ||| | | || | | | Sbjct 2 UAGGGGCUGCGCGGACGCAAACCCCCUCGGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGC-AUAGCACCCUUCUU 90 Query 150 --AAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||||||| || || | |||||||| ||||||||||| || ||||||||||||||||||| Sbjct 91 UAUAGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUCCUUCUUGAUCAAGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS00019A2B86_85681 Citrus clementina U1 spliceosomal RNA E-value: 4.2e-15 Identity: 74.21% Query coverage: 71.49% Gaps: 0.63% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG-AGAUGGUAAACCAACGCGCUCACCAAG 152 |||||||||||||||| ||||| || |||||||||||||||| ||| |||||| ||| || || | || | ||||| Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCAACCACUUUGGGCUGACCUUAGGCGGGUGCACCUCCCAAG 93 Query 153 UGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||| |||| | ||||||| || ||||| |||||| | | |||||||||||||||||||| Sbjct 94 UGCAAUGGAGGCCACCAACCUAGGCCAUGGGCCUUCAUGAUCGCCGAUUGACCCCGUCCAGGUAAGUAU 162 >> URS00021871E0_50452 Arabis alpina U1 spliceosomal RNA E-value: 4.5e-15 Identity: 70.55% Query coverage: 72.40% Gaps: 1.84% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUCAC 148 |||||| |||||||||| |||||||| |||||||| |||||| |||| ||||||||| ||| ||| | | | | | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCGGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGCAUAGCACCCUUCCUU 91 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | |||||||| || || | |||||||| |||| ||||| || |||||||||||||||||||| Sbjct 92 UAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUUCUUCAUGAUCAAGAGUUGACCCCGUCCAGGUAAGUAU 164 >> URS000240FDD9_4054 Panax ginseng (P. ginseng) long non-coding RNA (PGIN_LNC005046) E-value: 1.3e-17 Identity: 72.29% Query coverage: 75.11% Gaps: 0.00% Alignment: Query 55 UAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCU 145 ||||| | ||||||||||||||| |||| ||| |||||||||||| || ||| ||||||||| ||| || | | | | Sbjct 247 CAAUUGUUAAGGGCCGCGCGAACGCAGGCCCCAACUAUCACAAAUUAUGAUGUAGGCUCCACCACUUGGGUAGACCUUAGGAUAGCACCCC 337 Query 146 CACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||||| || || | | ||||||| || || |||||||| || | |||||| |||||||||||| Sbjct 338 UCCAAAGUGCAAUGAAAGUCACUAACCUAGGCCAUGGGCCAUCUUGAUCACCCAUUGACCCCAUCCAGGUAAGUA 412 >> URS00021871F2_50452 Arabis alpina U1 spliceosomal RNA E-value: 5.3e-15 Identity: 72.22% Query coverage: 71.95% Gaps: 1.85% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA-CGCGCUCAC-- 148 |||||| |||||||||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||| | | | | || | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGCAUAGCACCCUUCCCA 91 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||| || || | |||||||| |||| ||||| || ||||||||||||||||||| Sbjct 92 UAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCAUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS0002409CFB_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC002199) E-value: 6.8e-19 Identity: 71.51% Query coverage: 84.16% Gaps: 0.54% Alignment: Query 36 ACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 126 || ||| ||| | | ||| | | | |||||| |||||||||| ||||| ||||||||||||||||||| ||| ||||||||| Sbjct 96 ACAAAAGUUUGGAAUGAGG-AUUGGAUAGGGGCUGCGCGAACGCAGGCCCCCGCUACCACAAAUUAUGACGUAGGCUCGACCACUUGGGUC 185 Query 127 GAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAA 217 || || | | | | | | |||||||||| | || ||||||| || ||| ||||||| || | |||||||||||||||| Sbjct 186 GACCUUAGGCUAGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUGGGUCUUUUUGAUCGCCCAUUGACCCCGUCCAGGUAA 276 Query 218 GUAU 221 |||| Sbjct 277 GUAU 280 >> URS000241F195_59689 Arabidopsis lyrata (A. lyrata) long non-coding RNA (ALYR_LNC001330) E-value: 6.6e-15 Identity: 70.41% Query coverage: 75.11% Gaps: 2.37% Alignment: Query 54 GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA 139 ||| ||| |||||| |||||||||| ||||||||| |||||||| ||||| | |||| || | ||| ||| ||| | | Sbjct 93518 UUAAAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACAUAGGCUCUUCCUCAAGGGAAGACCUUAAGCAUA 93603 Query 140 ---CGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | | || | |||||||| | | || | |||||||| ||| ||||||| |||||||| |||||||||||| Sbjct 93604 GCACCCCAACAGUAUGUGCAAUGCG-GUCACUAGCCUAGGCCACUCGUCUUAUUGAUCGCGAGUCGACCCUGUCCAGGUAAGU 93685 >> URS00023B3526_3988 Ricinus communis (castor bean) long non-coding RNA (RCOM_LNC001732) E-value: 4e-20 Identity: 72.13% Query coverage: 82.81% Gaps: 1.64% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU 129 || ||| |||| | || | ||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||||||| Sbjct 125 AAGUUUAGAAUU---GGCAUGGAAAGGGGCCGCGCGAACGCAGGCCCCCACUGUCACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGAC 212 Query 130 GGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || | || | |||||||||| ||| | ||||||| | | |||||||||| || | ||||||||||||||||||| Sbjct 213 CUUAGGCAGGUGCAUCUCCUAAGUGCAAUGGAGACCAACUACCUAGGCCAUGAACAUUCUUGAUCGCCCAUUGACCCCGUCCAGGUAAGUA 303 Query 221 U 221 | Sbjct 304 U 304 >> URS00019A2790_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.2e-14 Identity: 73.55% Query coverage: 69.68% Gaps: 0.65% Alignment: Query 68 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG-AGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 ||||||||||| ||||| || |||||||||||||||| ||| |||||| ||| || || | || | ||||||||| Sbjct 8 ACGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCAACCACUUUGGGUUGACCUUAGGCGGGUGCACCUCCCAAGUGCA 97 Query 157 AUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||| |||| | ||||||| || ||||| |||||| || | |||||||||||||||||||| Sbjct 98 AUGGAGGCCACCAACCUAGGCCAUGGGCCUUCAUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 162 >> URS00019A2BE0_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.2e-14 Identity: 73.58% Query coverage: 71.49% Gaps: 0.63% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG-AGAUGGUAAACCAACGCGCUCACCAAG 152 |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||| ||| || || | || | | ||| Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUAUGACGUAGGCUCAGCCACUUUGGGCUGACCUUAGGCGGGUGCACCUCCGAAG 93 Query 153 UGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||| |||| | ||||||| | |||| |||||| || | |||||||||||||||||||| Sbjct 94 UGCAAUGGAGGCCACCAACCUAGGCCAUGAGCCUUAAUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 162 >> URS0000A419AC_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 1.3e-14 Identity: 71.15% Query coverage: 70.59% Gaps: 0.00% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGC 155 | | |||| ||| | || || || ||||||||||||| || ||| ||||||| ||| |||| || | |||||||| Sbjct 4 GAGUUGCGCCAACACAGACUCCGACUUCCACAAAUUAUGAUGUAGGUUCUGUCACUUGGACAGACCUUAAAGCAGUAACCCUCCCAAGUGC 94 Query 156 AAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||| | ||||||| ||||||| || |||| |||||| || | |||||| |||||||||||| Sbjct 95 AAUGAAGGUCAUUGAUCUAGGCCAUGGACCUUUUUGAUCAUCCAUUGACCCCAUCCAGGUAAGUA 159 >> URS000236A5D0_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010304) E-value: 3e-18 Identity: 69.12% Query coverage: 92.31% Gaps: 2.94% Alignment: Query 18 UGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACG 106 ||| ||| ||| || |||||| || |||||| | || ||||||||||||||||| ||||| || ||||||||||||| Sbjct 7055 UGUUAGUUUUCAAAGGG----AAAUUU-UAACUUAGGU-UUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGUAACAAAUUAUGACG 7137 Query 107 UCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG 195 | ||| ||||||||| || || | | | | | |||||||||| | || ||||||| | ||| ||||||| Sbjct 7138 UAGGCUCGACCACUUGGGCCGACCUUAGGCAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUAGGUCUUAUUGAUCG 7226 Query 196 GCCGUCGACCCCGUCCAGGUAAGUAU 221 || | |||||||||||||||||||| Sbjct 7227 CCCAUUGACCCCGUCCAGGUAAGUAU 7252 >> URS0002371E14_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010302) E-value: 3e-18 Identity: 69.12% Query coverage: 92.31% Gaps: 2.94% Alignment: Query 18 UGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACG 106 ||| ||| ||| || |||||| || |||||| | || ||||||||||||||||| ||||| || ||||||||||||| Sbjct 9578 UGUUAGUUUUCAAAGGG----AAAUUU-UAACUUAGGU-UUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGUAACAAAUUAUGACG 9660 Query 107 UCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG 195 | ||| ||||||||| || || | | | | | |||||||||| | || ||||||| | ||| ||||||| Sbjct 9661 UAGGCUCGACCACUUGGGCCGACCUUAGGCAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUAGGUCUUAUUGAUCG 9749 Query 196 GCCGUCGACCCCGUCCAGGUAAGUAU 221 || | |||||||||||||||||||| Sbjct 9750 CCCAUUGACCCCGUCCAGGUAAGUAU 9775 >> URS00023AFD87_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010303) E-value: 3e-18 Identity: 69.12% Query coverage: 92.31% Gaps: 2.94% Alignment: Query 18 UGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACG 106 ||| ||| ||| || |||||| || |||||| | || ||||||||||||||||| ||||| || ||||||||||||| Sbjct 8951 UGUUAGUUUUCAAAGGG----AAAUUU-UAACUUAGGU-UUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGUAACAAAUUAUGACG 9033 Query 107 UCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG 195 | ||| ||||||||| || || | | | | | |||||||||| | || ||||||| | ||| ||||||| Sbjct 9034 UAGGCUCGACCACUUGGGCCGACCUUAGGCAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUAGGUCUUAUUGAUCG 9122 Query 196 GCCGUCGACCCCGUCCAGGUAAGUAU 221 || | |||||||||||||||||||| Sbjct 9123 CCCAUUGACCCCGUCCAGGUAAGUAU 9148 >> URS00023D2D5F_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010304) E-value: 3e-18 Identity: 69.12% Query coverage: 92.31% Gaps: 2.94% Alignment: Query 18 UGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACG 106 ||| ||| ||| || |||||| || |||||| | || ||||||||||||||||| ||||| || ||||||||||||| Sbjct 7059 UGUUAGUUUUCAAAGGG----AAAUUU-UAACUUAGGU-UUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGUAACAAAUUAUGACG 7141 Query 107 UCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG 195 | ||| ||||||||| || || | | | | | |||||||||| | || ||||||| | ||| ||||||| Sbjct 7142 UAGGCUCGACCACUUGGGCCGACCUUAGGCAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUAGGUCUUAUUGAUCG 7230 Query 196 GCCGUCGACCCCGUCCAGGUAAGUAU 221 || | |||||||||||||||||||| Sbjct 7231 CCCAUUGACCCCGUCCAGGUAAGUAU 7256 >> URS00023FB12B_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010302) E-value: 3e-18 Identity: 69.12% Query coverage: 92.31% Gaps: 2.94% Alignment: Query 18 UGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACG 106 ||| ||| ||| || |||||| || |||||| | || ||||||||||||||||| ||||| || ||||||||||||| Sbjct 9652 UGUUAGUUUUCAAAGGG----AAAUUU-UAACUUAGGU-UUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGUAACAAAUUAUGACG 9734 Query 107 UCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG 195 | ||| ||||||||| || || | | | | | |||||||||| | || ||||||| | ||| ||||||| Sbjct 9735 UAGGCUCGACCACUUGGGCCGACCUUAGGCAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAGCCUAGGCCAUAGGUCUUAUUGAUCG 9823 Query 196 GCCGUCGACCCCGUCCAGGUAAGUAU 221 || | |||||||||||||||||||| Sbjct 9824 CCCAUUGACCCCGUCCAGGUAAGUAU 9849 >> URS0000A35944_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 1.6e-14 Identity: 71.97% Query coverage: 71.04% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 |||| |||||||||||| |||| || |||||||| |||| || |||||||| | |||||| ||| | | | | | |||| Sbjct 2 AGGGACCGCGCGAACGCAGGUCCCCACUGCCACAAAUAAUGAAGUAGGCUCUCCCAUUAAGGGAGACCUUAAGCUUGCACCCCUCCAAAGU 92 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 |||||| ||||| | ||||||| || |||| ||||| || | |||||| ||||||||||| Sbjct 93 GCAAUGGAAGCCACAGGCUUAGGCCAUGGACCUUAAUGAUCAUCCAUUGACCCCAUCCAGGUAAGU 158 >> URS00019BAA19_3755 Prunus dulcis sRNA ncRNA E-value: 1.8e-14 Identity: 66.50% Query coverage: 89.59% Gaps: 2.00% Alignment: Query 11 AAGGGCCUG-UAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUU 100 | |||||| || || | || | || || |||| ||||| ||||||||||||| |||| ||||| | | ||||||| Sbjct 196 AUGGGCCUUUUACGUUGAGAACUUACAAAGAAGUU--UGUUUAUAGAAUUGACAGGGGCCGCGCGGACGCAGGCCCCCACGGCAACAAAUU 284 Query 101 AUGACGUCCACUCUCCCACU-UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUU 190 ||||||| |||||| || || ||||| || | | | | | |||||||||| |||| | ||||||| | ||||||| Sbjct 285 AUGACGUUGGCUCUCCUACAGUGAGGAGACCAUAGGCAGGCACCCCUCCUAAGUGCAAUGGAGGCCACCAACCUAGGCCAUGAGCCUUCUU 375 Query 191 GAUCGGCCGUCGACCCCG 208 ||||| || | ||||||| Sbjct 376 GAUCGCCCAUUGACCCCG 393 >> URS000240A861_3641 Theobroma cacao (cacao) long non-coding RNA (TCAC_LNC000106) E-value: 2.1e-14 Identity: 77.52% Query coverage: 58.37% Gaps: 0.00% Alignment: Query 93 CACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGC 183 ||||||||||||||| |||||||||||||||||| || || | || | | |||||||||| ||||| | ||||||| | Sbjct 2 CACAAAUUAUGACGUAGGCUCUCCCACUUGGGGAGACCUUAGACAGAUGCACCACCGAAGUGCAAUGGAGGCCAUCUACCUAGGCCAUGAG 92 Query 184 CCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||| ||||||| || | |||||||||||||||||||| Sbjct 93 CCUUUUUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 130 >> URS0000A0706E_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 2.3e-14 Identity: 70.73% Query coverage: 71.49% Gaps: 3.66% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCU------CUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCAC 148 ||||| |||||||||| ||||| |||||||||||||||| || |||| ||||||| ||| || | | | | | | Sbjct 4 GGGGCUGCGCGAACGCAGGCCCCCACUACCACUACCACAAAUUAUGAUGUAGGCUCUGUCACUUGGACAGACCUUAGAGAAGCACCCCUCC 94 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||||||| | || | ||||||| || ||||||||||| || | |||||| ||||||||||||| Sbjct 95 UAAGUGCAAUGGAGGUCACUCCCCUAGGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 167 >> URS0002187112_50452 Arabis alpina U1 spliceosomal RNA E-value: 3.5e-14 Identity: 69.75% Query coverage: 71.95% Gaps: 1.85% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUCAC 148 |||||| ||||| |||| |||||||| |||||||| |||||| |||| || |||||| ||| ||| | | | | | Sbjct 2 UAGGGGCUGCGCGUACGCAAACCCCCUCGGCCACAAAUAAUGACGCAGGCUCUUCCGCUUGGGAAGACCUUAAGCAUAGCACCCUUCCUU 91 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||| || || | |||||||| |||||||||| || ||||||||||||||||||| Sbjct 92 UACGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUUCUUCUUGAUCAAGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS0000D29606_3702 Arabidopsis thaliana (thale cress) ATSL257800 E-value: 3.8e-14 Identity: 70.06% Query coverage: 73.76% Gaps: 3.59% Alignment: Query 58 UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGC---- 144 ||| |||||| |||||||||| ||||||||| |||||||| |||||| |||| || | |||| ||| ||| | | || | Sbjct 124 AUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCUCAUGGGAAGACCUUAAGCAUA-GCACCCCA 213 Query 145 UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | |||||||| | | || | |||||||| ||| |||||| || ||||||||||||||||||| Sbjct 214 GCGUUAUGUGCAAUGCG-GUCACUAGCCUAGGCCACUCGUCUUAUUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 288 >> URS00023F8E9B_157791 Vigna radiata (V. radiata) long non-coding RNA (VRAD_LNC009612) E-value: 9.7e-17 Identity: 71.34% Query coverage: 74.21% Gaps: 0.00% Alignment: Query 58 UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | | |||||| |||||||||| |||||||| ||||||||||||| || |||| ||||| ||| ||| || | || | | Sbjct 9 AUAGUAGGGGCUGCGCGAACGCAAGCCCCCUCUGCCACAAAUUAUGAUGUAGGCUCUGCCACUAGGGCAGACCUUAGAACAGCAUCCCU 97 Query 147 ACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||| |||||||| | || | | ||||||| | |||| ||||| | | |||||| ||||||||||||| Sbjct 98 UCCAUGUGCAAUGAAGGUCACAGUUCUAGGCCAUGAGCCUUUCUGAUCACUCAUUGACCCCAUCCAGGUAAGUAU 172 >> URS00021876B7_50452 Arabis alpina U1 spliceosomal RNA E-value: 5.2e-14 Identity: 70.30% Query coverage: 72.40% Gaps: 3.03% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCA--CAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUC 146 |||||| |||||||||| |||||||| |||| ||||| |||||| ||| ||||||||| ||| ||| | | | | | Sbjct 2 UAGGGGCUGCGCGAACGCAAACCCCCUCGACCACACAAAUAAUGACGCAGGUUCUUCCACUUGGGAAGACCUUAAGCAUAGCACCCUUCC 91 Query 147 ACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | |||||||| || || | |||||||| |||||| | || ||||||||||||||||||||||| Sbjct 92 UUUACGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUUCUUCUUUAACGAGAGUCGACCCCGUCCAGGUAAGUAU 166 >> URS0000A0A37D_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 5.3e-14 Identity: 70.25% Query coverage: 71.49% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 |||||| |||| ||||| |||| ||||||||||||||| || || | |||||||| | || ||| | | |||||| Sbjct 3 AGGGGCAGCGCAAACGCAGGUCCCCAUUACCACAAAUUAUGAUGUAGGCUUUGCCACUUGGACAAGCCUUAGGGUAACACCCCUCCCAAGU 93 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||| | ||| ||||||| || ||||||||||| || | |||||| |||||||| ||| Sbjct 94 GCAAUGGAGGUUAUUACCCUAGGCCAUGGACCUUCUUGAUCAUCCAUUGACCCCAUCCAGGUAUGUA 160 >> URS0000A61095_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 5.3e-14 Identity: 75.74% Query coverage: 61.54% Gaps: 0.00% Alignment: Query 86 CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGG 176 || |||||||||||||||| || |||||| ||||| ||||| || || ||| | | |||||||||||| | ||| || |||| Sbjct 4 CCGCUACCACAAAUUAUGAUGUAGGCUCUCCUACUUGAGGAGACCUUAGACUAACACCCCUUCCAAGUGCAAUGAAGGUCAUCAAUCUAGG 94 Query 177 CCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||| || |||| ||||| || | |||||| ||||||||||||| Sbjct 95 CCAUGGACCUUAAUGAUCAUCCAUUGACCCCAUCCAGGUAAGUAU 139 >> URS00009C9405_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 8e-14 Identity: 71.07% Query coverage: 71.95% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||||||||||||||||| |||| ||| |||||||||||| || |||| |||||||| ||| || | | | | | | |||| Sbjct 3 AGGGGCCGCGCGAACGCAGGCCCCUACUAUCACAAAUUAUGAUGUAGGCUCUACCACUUGGAUAGACCUUAGAGAAGCACCCCUCCAAAGU 93 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||| | || | ||||||| | || ||||||| || | |||||| ||||||||||||| Sbjct 94 GCAAUAGAGGUCACUCCCCUAGGCCAUGAGUCUACUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 161 >> URS0000CDE080_3702 Arabidopsis thaliana (thale cress) ATSL259430 E-value: 1.4e-13 Identity: 65.26% Query coverage: 84.62% Gaps: 2.11% Alignment: Query 34 GGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 124 | | | | || | || | | ||| |||||| |||||||||| ||||| ||| |||||||| ||||||| || || | ||| Sbjct 151 GCAUAACAGAUUGAGACUAAUUGAAUGGUAGGGGCUGCGCGAACGCAAACCCCUUCUGCCACAAAUAAUGACGUAGGAUCCUCCUCAAGGG 241 Query 125 GAGAUGGUAAACCAA---CGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 ||| || | | | | | | |||||||| | | || | |||||||| ||| ||||||| || ||||||||||| Sbjct 242 AAGACCUUAGGCAUAGCACCCCAACGGUAUGUGCAAUGCG-GUCACUAGCCUAGGCCACUCGUCUUGUUGAUCGCGAGUAGACCCCGUCCA 331 Query 213 GGUAAGUA 220 |||||||| Sbjct 332 GGUAAGUA 339 >> URS0002364567_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC005302) E-value: 1.2e-17 Identity: 70.81% Query coverage: 82.35% Gaps: 1.62% Alignment: Query 40 AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU-GGGGAG 127 ||| || || | | | | || ||||||||||||||||| ||||| || | |||||||||||||| |||||| |||| | |||| Sbjct 4785 AAUAUUGAACUGAAAAAUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCUCCUACUUUGAGGAG 4873 Query 128 AUGGUAAACCAACGCGCU--CACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGG 214 | || | | | || || | |||||||| | || | ||||||| | | ||| ||||| ||| | ||||||||||||| Sbjct 4874 ACCUUAGAGUGGCACCCUUCCAGUAUGUGCAAUGGAGGUCACCACUCUAGGCCAUGACUCUUUAUGAUCAGCCAUUGACCCCGUCCAGG 4962 Query 215 UAAGUAU 221 ||||||| Sbjct 4963 UAAGUAU 4969 >> URS000236A5AB_4006 Linum usitatissimum (flax) long non-coding RNA (LUSI_LNC005301) E-value: 1.2e-17 Identity: 70.81% Query coverage: 82.35% Gaps: 1.62% Alignment: Query 40 AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU-GGGG 125 ||| || || | | | | || ||||||||||||||||| ||||| || | |||||||||||||| |||||| |||| | || Sbjct 61551 AAUAUUGAACUGAAAAAUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCUCCUACUUUGAGG 61637 Query 126 AGAUGGUAAACCAACGCGCU--CACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUC 210 ||| || | | | || || | |||||||| | || | ||||||| | | ||| ||||| ||| | ||||||||| Sbjct 61638 AGACCUUAGAGUGGCACCCUUCCAGUAUGUGCAAUGGAGGUCACCACUCUAGGCCAUGACUCUUUAUGAUCAGCCAUUGACCCCGUC 61724 Query 211 CAGGUAAGUAU 221 ||||||||||| Sbjct 61725 CAGGUAAGUAU 61735 >> URS00024254E7_57918 Fragaria vesca (wild strawberry) long non-coding RNA (FVES_LNC001884) E-value: 2e-13 Identity: 66.15% Query coverage: 78.28% Gaps: 9.90% Alignment: Query 21 AAGUAAACAAGAGGGACCAAAUUUU---------AAAUUUAG----GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACC-- 93 ||| ||||| |||| || | || | || ||||| | ||||| |||||| ||||| |||| ||||||| || Sbjct 7918 AAGAAAACACGAGGAACAAGCUUGUGUUUCCAGAAAUUUUAGAGACGAAAUUGUAAGGGGCUGCGCGGACGCAAACCCCCUGGCCCCU 8005 Query 94 ----ACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGC 177 |||||| ||||||| |||||||| |||||||||| ||| | | | | | |||||||||||| | || | | ||||| Sbjct 8006 GGCAACAAAUAAUGACGUAGACUCUCCCUCUUGGGGAGACCUUAAGCGAGCACCCCUCCCAAGUGCAAUGGAGGUCACUUACCUAGGC 8093 Query 178 CACGGCCCUUCUUGAU 193 || | ||||| ||| Sbjct 8094 CAUGAGUCUUCUCGAU 8109 >> URS0002373705_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001167) E-value: 8.5e-17 Identity: 68.68% Query coverage: 82.35% Gaps: 1.10% Alignment: Query 40 AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 130 || ||| || | |||||| |||||| |||||||||| ||||| || | |||||||||||| | ||| | ||||||| || Sbjct 186 AAAUUUUGCUUAA--GAAUUGGUAGGGGCUGCGCGAACGCAAGCCCCCGCUGCAACAAAUUAUGACAUAGGCUCGACUACUUGGGCCGACC 274 Query 131 GUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || | | | | |||||||||| | || | ||||||| | ||| ||||||| || | |||||||||||||||||||| Sbjct 275 UUAGGUAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAACCUAGGCCAUAGGUCUUAUUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 365 >> URS00023FFFEC_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001167) E-value: 8.5e-17 Identity: 68.68% Query coverage: 82.35% Gaps: 1.10% Alignment: Query 40 AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 130 || ||| || | |||||| |||||| |||||||||| ||||| || | |||||||||||| | ||| | ||||||| || Sbjct 95 AAAUUUUGCUUAA--GAAUUGGUAGGGGCUGCGCGAACGCAAGCCCCCGCUGCAACAAAUUAUGACAUAGGCUCGACUACUUGGGCCGACC 183 Query 131 GUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || | | | | |||||||||| | || | ||||||| | ||| ||||||| || | |||||||||||||||||||| Sbjct 184 UUAGGUAGGCACCCCUCCAAAGUGCAAUGGAGGUCACAAACCUAGGCCAUAGGUCUUAUUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 274 >> URS0000E5EA63_3880 Medicago truncatula (barrel medic) ncRNA E-value: 8.1e-15 Identity: 70.59% Query coverage: 76.47% Gaps: 0.59% Alignment: Query 47 AAUUUAGGUAAU-UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAA 134 |||| | |||| ||| |||||||||||||||| ||||| | | ||||||||||| || ||| ||||||||| ||| || Sbjct 6639 AAUUAAACUAAUAUGGAGGGGGCCGCGCGAACGCAGGCCCCCACAGCAACAAAUUAUGAUGUAGGCUCCACCACUUGGGUAGACCUUAG 6727 Query 135 ACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGU 215 | | | | | | |||||||||| | || | | ||||||| | ||||| ||||| || | |||||| ||||||| Sbjct 6728 AAGAGCACCCCUCCAAAGUGCAAUGGAGGUCACUUUUCUAGGCCAUAGGCCUUCAUGAUCACCCAUUGACCCCAUCCAGGU 6808 >> URS0000A76B77_3702 Arabidopsis thaliana (thale-cress) ncRNA (AT5G04445) E-value: 2.6e-13 Identity: 68.24% Query coverage: 75.57% Gaps: 2.35% Alignment: Query 54 GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CG 141 | | ||| |||||| |||||||||| ||||||||| |||||||| || ||| |||| || | ||| ||| || | | | Sbjct 122 AUGACUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUAACGCAGGCUCUUCCUCAAGGGAAGACCUUAGGCAUAGCACC 212 Query 142 CGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | | |||||||| | | || | |||||||| ||| ||||||| || ||||||||||||||||||| Sbjct 213 CCAACGGUAUGUGCAAUGCG-GUCACUAGCCUAGGCCACUCGUCUUAUUGAUCGCGAGUUGACCCCGUCCAGGUAAGUA 290 >> URS0002187396_50452 Arabis alpina U1 spliceosomal RNA E-value: 3e-13 Identity: 69.57% Query coverage: 71.49% Gaps: 1.86% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUCACC 149 ||||| ||| |||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||| | || | | | Sbjct 3 UGGGGCUCCGCAUACGCAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACUUUAAGCUAAGCACCCUUCCUUU 92 Query 150 AAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||| || |||| |||||||| |||| ||||| || |||||| |||||||||||| Sbjct 93 AUGUGCAAUGGAAGUCAUUAGCAUAGGCCACUCGUCUUCCUGAUCACAAGUUGACCCCAUCCAGGUAAGUA 163 >> URS000218736F_50452 Arabis alpina U1 spliceosomal RNA E-value: 3.5e-13 Identity: 68.52% Query coverage: 71.95% Gaps: 1.85% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCA---ACGCGCUCAC 148 |||||| ||||| |||| |||| |||| |||||||| |||||| |||| |||| |||| ||| || | || | | Sbjct 2 UAGGGGCUGCGCGUACGCAAACCCUCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACAUGGGAAGACCUUAGGCAUAGCACCCUUCCUU 91 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||| || || | |||||||| |||| ||||| || ||||||||||||||||||| Sbjct 92 UAUGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCAUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 163 >> URS0000A1D536_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 5.4e-13 Identity: 71.60% Query coverage: 71.95% Gaps: 4.32% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA---UGGUAAACCAACGCGCUCACCA 150 |||||| |||||||||| |||| |||||||||||||||| || ||| ||||||||| ||| | | ||| |||| | || | Sbjct 3 AGGGGCUGCGCGAACGCAA-GCCCCACUACCACAAAUUAUGAUGUAGGUUCUACCACUUGGGUAGACCUUAGGAAAGCAACCCUCU---UA 89 Query 151 AGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||||| | || || | | || |||| |||||| || | |||||| ||||||||||||| Sbjct 90 AGUGCAAUGAAUGUCACCCUCCUAUGUUAUGGACCUUAUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 160 >> URS00019A27C3_85681 Citrus clementina U1 spliceosomal RNA E-value: 8.9e-13 Identity: 71.52% Query coverage: 71.04% Gaps: 0.63% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG-AGAUGGUAAACCAACGCGCUCACCAAG 152 |||||||||||||||| ||||| || |||||||||||||||| ||| ||||| ||| || || || ||| | Sbjct 4 GGGGCCGCGCGAACGCAGGCCCCCGCUGCCACAAAUUAUGACGUAGGCUCAGCCACUAUGGGCUGACCUUAGGUGGGUGCAUCUCCCACG 93 Query 153 UGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||||| ||| | ||||||| || ||| ||||||| || ||||||||||||||||||||| Sbjct 94 UGCAAUGGAGACCACCAACCUAGGCCAUGGGCCUGUUUGAUCGCCCAUCGACCCCGUCCAGGUAAGUA 161 >> URS0000AE7DF4_3702 Arabidopsis thaliana (thale cress) miscellaneous RNA E-value: 1.3e-12 Identity: 70.30% Query coverage: 73.76% Gaps: 1.82% Alignment: Query 57 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACG--CGCU 145 | ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | ||| ||| ||| | || | | Sbjct 6 AAUGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAAGGGAAGACCUUAAGCUAAGCACCCCA 96 Query 146 CACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 || ||||||| | | || | |||||||| | |||||||| || |||||||||||||||||| Sbjct 97 GACAAAGUGCAG-GCCGGUCACUAGCCUAGGCCACUCGUCAUCUUGAUCACGAGUAGACCCCGUCCAGGUAAGU 169 >> URS00023532DC_4039 Daucus carota (carrot) long non-coding RNA (DCAR_LNC003794) E-value: 2.8e-17 Identity: 65.98% Query coverage: 87.78% Gaps: 2.58% Alignment: Query 27 ACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 ||| | | || ||| | | | || ||| | |||||||||| ||| || |||||||||||| || |||| Sbjct 5266 UAAAGUAAGGCUAAUGUUUUCAC----UAGAAUUGCGGGGACUGCGCGAACGCAAGU-CCCCCUGUCACAAAUUAUGAUGUAGACUCCA 5349 Query 116 CCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGAC 204 ||||||||| |||| || | | | | | | ||||||||| | || | | ||||||| || ||||||||||| || | ||| Sbjct 5350 CCACUUGGGUAGAUCUUAGGCGAGCACCCCUCCUCAGUGCAAUGGAGGUCACUAACCUAGGCCAUGGACCUUCUUGAUCAUCCAUUGAC 5438 Query 205 CCCGUCCAGGUAAGUA 220 ||| |||||||||||| Sbjct 5439 CCCAUCCAGGUAAGUA 5454 >> URS00023DFA3F_4039 Daucus carota (carrot) long non-coding RNA (DCAR_LNC003794) E-value: 2.8e-17 Identity: 65.98% Query coverage: 87.78% Gaps: 2.58% Alignment: Query 27 ACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 ||| | | || ||| | | | || ||| | |||||||||| ||| || |||||||||||| || |||| Sbjct 5378 UAAAGUAAGGCUAAUGUUUUCAC----UAGAAUUGCGGGGACUGCGCGAACGCAAGU-CCCCCUGUCACAAAUUAUGAUGUAGACUCCA 5461 Query 116 CCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGAC 204 ||||||||| |||| || | | | | | | ||||||||| | || | | ||||||| || ||||||||||| || | ||| Sbjct 5462 CCACUUGGGUAGAUCUUAGGCGAGCACCCCUCCUCAGUGCAAUGGAGGUCACUAACCUAGGCCAUGGACCUUCUUGAUCAUCCAUUGAC 5550 Query 205 CCCGUCCAGGUAAGUA 220 ||| |||||||||||| Sbjct 5551 CCCAUCCAGGUAAGUA 5566 >> URS00023BE117_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC004242) E-value: 3.9e-12 Identity: 63.30% Query coverage: 84.16% Gaps: 1.06% Alignment: Query 35 GACCAAAUUUUAAAUUUAGG--UAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU 121 | ||||||||| | | | | ||||| || | ||||| | ||||| ||||||||||||||| | | ||||| Sbjct 978 UAAUAAAUUUUAAGGUAUAUUUUUUUAAGUAGGGGUUGCACUAACGCAAGUCUCCUCUGACACAAAUUAUGACGUAGGUUUUGUCACUU 1066 Query 122 GGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUC 210 || | | || | |||| | | | |||||||| | || | | ||||||| | |||| ||||| | | |||||||| Sbjct 1067 GGACAAACCUUAGAACAACACCCCUUCUGUGUGCAAUGAAGGUCACUCUUCUAGGCCAUAGGCCUUUCUGAUCACCUAUUGACCCCGUG 1155 Query 211 CAGGUAAGUA 220 |||||||||| Sbjct 1156 CAGGUAAGUA 1165 >> URS0000D217E7_3702 Arabidopsis thaliana (thale cress) ATSL007620 E-value: 4.5e-12 Identity: 70.55% Query coverage: 72.85% Gaps: 1.84% Alignment: Query 59 UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACG--CGCUCA 147 ||| |||||| |||||||||| ||||||||| |||||||| ||||||| |||| || | ||| ||| ||| | || | | | Sbjct 3 UGGUAGGGGCUGCGCGAACGCAAACCCCCUCUGCCACAAAUAAUGACGUAGGCUCUUCCUCAAGGGAAGACCUUAAGCUAAGCACCCCAGA 93 Query 148 CCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | ||||||| | | || | |||||||| | |||||||| || |||||||||||||||||| Sbjct 94 CAAAGUGCAG-GCCGGUCACUAGCCUAGGCCACUCGUCAUCUUGAUCACGAGUAGACCCCGUCCAGGUAAGU 164 >> URS0002413387_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC040421) E-value: 1.1e-11 Identity: 63.92% Query coverage: 87.33% Gaps: 1.55% Alignment: Query 27 ACAAGAGGGACCAAAUUUU-AAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC 116 || || ||| ||| || ||||| | || || |||||||||||| | |||| || |||||||||||||| | ||| | Sbjct 725 GCAGAAGCUACCCAAUAUUGUUGGUUAGGAGUUGGGUAGAGGCCGCGCGAACACAGGCCCCUGCUGCCACAAAUUAUGACAUAGGCUCAAC 815 Query 117 CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCC 207 ||||| | || | | | | | | ||||||||| || || | || |||| || ||| ||||||| || ||||| Sbjct 816 AUCUUGGAUCAACCUUAGGCAAGCACCCCUCCAUAGUGCAAUGGAAGUCACCAACCUAAGCCAUGGGUCUUAUUGAUCGCCC--AGACCCU 904 Query 208 GUCCAGGUAAGU 219 |||||||||| | Sbjct 905 GUCCAGGUAAAU 916 >> URS00023FF45F_130454 Arachis ipaensis (A. ipaensis) long non-coding RNA (AIPA_LNC000303) E-value: 4e-11 Identity: 71.53% Query coverage: 61.99% Gaps: 0.00% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 |||| |||||||||||||||| || ||| ||||||||| ||| || || | | || | |||||||| || || | Sbjct 2 CCCCACUACCACAAAUUAUGAUGUAGGCUCCACCACUUGGGUAGACCUUAGACUGGCACCCUUCCUUGGUGCAAUGGAAGUCACCAACC 90 Query 173 UAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||||| || |||| ||||| || | |||||| |||||||||||| Sbjct 91 UAGGCCAUGGGCCUUUAUGAUCACCCAUUGACCCCAUCCAGGUAAGUA 138 >> URS000234B3BA_157791 Vigna radiata (V. radiata) long non-coding RNA (VRAD_LNC016237) E-value: 1.9e-12 Identity: 67.27% Query coverage: 74.66% Gaps: 0.00% Alignment: Query 55 UAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACG 141 ||| | |||| ||||| |||| ||||| |||||||||||||||| || ||||| | | | |||| || || | Sbjct 1125 GAAUAGAAGAGGGCUGCGCGGACGCAAGCCCCCACUACCACAAAUUAUGAUGUAGACUCUGCUCAUAGAACAGAUCUUAGGAGAAUG 1211 Query 142 CGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | | | |||||||||| | || | ||||| | || |||| ||||||| || | ||||| |||||||||| Sbjct 1212 CCCCUCCAAAGUGCAAUGGAGGUCAGUAUCCUAGGCGAUGGACCUUAUUGAUCGUCCAUACACCCCACCCAGGUAAGU 1289 >> URS0000A36134_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 1.8e-10 Identity: 66.88% Query coverage: 69.68% Gaps: 0.00% Alignment: Query 67 GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 | | |||||||| | || |||||| ||||||||| || || | ||||||||| | | || |||| | || | | ||||| Sbjct 5 GUCAUGCGAACGCAGGCUUCCACUACCAUAAAUUAUGAUGUAGGCUUUGCCACUUGGGCAUACCUUAGUGCAACACUCUUCCUAUAUGCAA 95 Query 158 UGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || | || | | ||||| | || ||| ||||| | || | |||||| || |||||| || Sbjct 96 UGAAGGUCACUAUUCUAGGCAAUGGAUCUUUUUGAUUGCCCAUUGACCCCAUCUAGGUAAUUA 158 >> URS0002423D8F_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC004134) E-value: 2.4e-16 Identity: 66.83% Query coverage: 90.95% Gaps: 1.95% Alignment: Query 20 UAAGUAAACAAGAGGGACCA---AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 |||| ||| | | ||||| |||| | | | | ||||||||| |||||||||| ||||| | | |||||||||||| | Sbjct 57 UAAGGAAAACAUAUAGACCAUCAAAUUCAUAUUCUUUAGUUUGGGCAGGGGCUGCGCGAACGCAAGCCCCCACGGCAACAAAUUAUGACAU 147 Query 108 CCACUCUCCCAC-UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGC 197 ||||||| || ||| |||||| || | | | | | ||||||||| | || |||||| | |||||||||||| Sbjct 148 UGACUCUCCUACAUUGAGGAGAUCAUAGGCAGGCACCCCUUCAGAGUGCAAUGAAGGUCACCAGCCCAGGCCAUGAGCCUUCUUGAUCGCU 238 Query 198 CGUCGACCCCGUCCAGGUAAGUA 220 | | ||||| ||||||||||||| Sbjct 239 CAUAGACCCUGUCCAGGUAAGUA 261 >> URS0000A2DB2E_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 3.1e-10 Identity: 67.95% Query coverage: 70.59% Gaps: 1.28% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGC 155 ||| | | ||||| ||| |||||||||||||||| || ||||||| || | | ||| || || ||| | | |||||||| Sbjct 5 GGGUUGUGUGAACGUAGGUCCCUACUACCACAAAUUAUGAUGUAGACUCUCCUACCUAAGAAGACCCUAGACUAACACCCCUCCCAAGUGC 95 Query 156 AAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||| | ||| || ||| || || | | ||||| || | |||||| || ||||||||| Sbjct 96 AAUGGAGGUCAUAAAUCUAG--CAUGGAUCAUAAUGAUCAUCCAUUGACCCCAUCUAGGUAAGUA 158 >> URS000237C026_3888 Pisum sativum (pea) long non-coding RNA (PSAT_LNC004361) E-value: 4.9e-10 Identity: 66.27% Query coverage: 72.40% Gaps: 3.61% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUA---CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUGGGGAGAUGGUAAACCAACGCGCU-- 145 | ||| |||||||||||| ||| | || |||||||||| ||||| || || ||| ||| ||| || ||||| || Sbjct 291 GAGGGGUCCGCGCGAACGCAGGCGUCCCUCACUGCCACAAAUUACGACGUAGGUGCUACCAACUAGGGUAGACCUUAGACCAAUUUCCUUC 381 Query 146 CACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | |||||||| || ||| | || |||| || ||| ||||||| || | ||||||||||| ||| Sbjct 382 CUUUAUGUGCAAUGGAAGUCAUCAGUCUAAGCCAUGGGCCUGCUUGAUCACCCAAUAGCUCCGUCCAGGUAUGUA 456 >> URS000218758D_50452 Arabis alpina U1 spliceosomal RNA E-value: 5.9e-10 Identity: 69.66% Query coverage: 63.80% Gaps: 2.76% Alignment: Query 63 AGGGGCCGCGCGAACGCGU-ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCA---ACGCGCUCAC 148 |||||| |||||||||| ||||||||| |||||||| |||||| |||| ||||||||| ||| ||| | || || | Sbjct 3 AGGGGCUGCGCGAACGCAAAACCCCCUCUGCCACAAAUAAUGACGCAGGCUCUUCCACUUGGGAAGACCUUAAGCAUAUCACCCGUCCUU 92 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGA 203 ||||||||| || || | |||||||| |||||||||| ||||| Sbjct 93 AUAGUGCAAUGGAAGUCACUAGCCUAGGCCACUCUUCUUCUUGAUCAAGAGUCGA 147 >> URS000235E82C_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 1.3e-9 Identity: 68.52% Query coverage: 73.30% Gaps: 0.62% Alignment: Query 58 UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | | | ||| | Sbjct 4065 UAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCCC 4152 Query 147 ACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 ||||||||| | | | ||||||| ||||| ||||| ||||||||| |||||||||| Sbjct 4153 CGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 4225 >> URS00023BD4B5_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 1.3e-9 Identity: 68.52% Query coverage: 73.30% Gaps: 0.62% Alignment: Query 58 UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | | | ||| | Sbjct 4070 UAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCCC 4157 Query 147 ACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 ||||||||| | | | ||||||| ||||| ||||| ||||||||| |||||||||| Sbjct 4158 CGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 4230 >> URS00023E6D5A_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 1.3e-9 Identity: 68.52% Query coverage: 73.30% Gaps: 0.62% Alignment: Query 58 UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | | | ||| | Sbjct 4107 UAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCCC 4194 Query 147 ACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 ||||||||| | | | ||||||| ||||| ||||| ||||||||| |||||||||| Sbjct 4195 CGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 4267 >> URS00023E8EA6_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 1.3e-9 Identity: 68.52% Query coverage: 73.30% Gaps: 0.62% Alignment: Query 58 UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | | | ||| | Sbjct 4065 UAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCCC 4152 Query 147 ACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 ||||||||| | | | ||||||| ||||| ||||| ||||||||| |||||||||| Sbjct 4153 CGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 4225 >> URS00023F6060_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 1.3e-9 Identity: 68.52% Query coverage: 73.30% Gaps: 0.62% Alignment: Query 58 UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | | | ||| | Sbjct 4118 UAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCCC 4205 Query 147 ACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 ||||||||| | | | ||||||| ||||| ||||| ||||||||| |||||||||| Sbjct 4206 CGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 4278 >> URS000241BC92_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014891) E-value: 1.3e-9 Identity: 68.52% Query coverage: 73.30% Gaps: 0.62% Alignment: Query 58 UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | | | ||| | Sbjct 1666 UAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCCC 1753 Query 147 ACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 ||||||||| | | | ||||||| ||||| ||||| ||||||||| |||||||||| Sbjct 1754 CGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 1826 >> URS0002425FE4_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC014892) E-value: 1.3e-9 Identity: 68.52% Query coverage: 73.30% Gaps: 0.62% Alignment: Query 58 UUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | ||| ||||||||||||||||| ||||| || |||||||||| ||||| | | | | | | ||||| || | | | ||| | Sbjct 2963 UAGGCGGGGGCCGCGCGAACGCGAGCCCCCACUGCCACAAAUUACGACGUGUAUGCCCU-CCGUAGAGAGAUACUAGAGCCGCCCGCCC 3050 Query 147 ACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 ||||||||| | | | ||||||| ||||| ||||| ||||||||| |||||||||| Sbjct 3051 CGUCAGUGCAAUGGGCCGGGCUCCUCUAGGCCAUCCACCUUCCUGAUCAUGGAUCGACCCCGCCCAGGUAAGU 3123 >> URS00023B41FB_157791 Vigna radiata (V. radiata) long non-coding RNA (VRAD_LNC009612) E-value: 1.4e-14 Identity: 67.03% Query coverage: 82.35% Gaps: 1.65% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 125 || | ||||| || || | | |||||| |||||||| | |||||||| ||||| ||||||| || |||| ||||| || Sbjct 3944 AAGUGUUAAACUU---UACAUAGUAGGGGCUGCGCGAACACAAGCCCCCUCUGCCACAGAUUAUGAUGUAGGCUCUGCCACUAGGNC 4027 Query 126 AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | | || | || | | | | |||||||| | || | | ||| ||| | |||| ||||| | | |||||| |||| Sbjct 4028 ANACCUUAGAACAGCACCCCUUCNUUGUGCAAUGAAGGUCACAGUUCUAGNCCAUGAGCCUUUNUGAUCACUCAUUGACCCCAUCCA 4114 Query 213 GGUAAGUA 220 |||||||| Sbjct 4115 GGUAAGUA 4122 >> URS0002372D57_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC008983) E-value: 4.4e-17 Identity: 69.61% Query coverage: 81.90% Gaps: 1.10% Alignment: Query 41 AUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 127 | ||| | || ||| | || |||| | |||||||||| ||| || |||||||||||||||| ||| |||||||| || Sbjct 15282 AAUUUGACUU--UGUAUUGGGUAGGGACUGCGCGAACGCAGGACCCUGCUGCCACAAAUUAUGACGUAGGCUCAACCACUUGGAUAG 15366 Query 128 AUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGG 214 | || | | | | | |||||||||| | || | ||||||| || ||||| ||||| || | ||||||||||||| Sbjct 15367 ACCUUAGGCAGGCACCCCACCAAAGUGCAAUGGAGGUCACCAACCUAGGCCAUGGGCCUUCAUGAUCACCCAUUGACCCCGUCCAGG 15453 Query 215 UAAGUAU 221 ||||||| Sbjct 15454 UAAGUAU 15460 >> URS0000A767AA_3702 Arabidopsis thaliana (thale-cress) ncRNA (AT1G06867) E-value: 3.1e-9 Identity: 60.11% Query coverage: 76.47% Gaps: 15.73% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA----CUCUCCCACUUGGGGAGAUGGUAAAC 136 | | || || |||||| |||||||| | ||||| ||| ||||||| ||||||| || |||| ||||||||| |||| || | Sbjct 75 UGAUAUAGAUGAUAGGGGCUGCGCGAACCCAAACCCCAUCUUCCACAAACAAUGACGUACAUAGGCUCUUCCACUUGGGAAGAUCUUAGGC 165 Query 137 CAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA-----GGUAAG 218 | | || || | |||||||| ||||||||| || ||| ||||||| |||||| Sbjct 166 UA-------------------AGCAAGUCACUAGCCUAGGCCACUCGUUUUCUUGAUCCUGAGUUGACUCCGUCCAGUCCAGGUAAG 233 >> URS0002382DFB_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006979) E-value: 6.4e-9 Identity: 61.54% Query coverage: 76.47% Gaps: 15.98% Alignment: Query 52 AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACC 137 || | ||| |||| || ||||| | | ||| || |||||||||||||||| | || Sbjct 10014 UUGUUAACAGCA-GGGCUGCACGAACACAGGC-CCCACUGCCACAAAUUAUGACGUAGGC------------------GGG----- 10074 Query 138 AACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | | |||||||||||| || || || ||||||| || ||||||||||| || | ||||| |||||||||||| Sbjct 10075 --CACCCCUCCCAAGUGCAAUGGAAGUCACCGACCUAGGCCAUGGGCCUUCUUGAUCACCCAUUAACCCCAUCCAGGUAAGUA 10155 >> URS000236433A_3880 Medicago truncatula (barrel medic) long non-coding RNA (MTRU_LNC005741) E-value: 1.5e-8 Identity: 70.73% Query coverage: 55.66% Gaps: 0.00% Alignment: Query 98 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCC 184 ||||||| || ||| ||||||| | ||| || | | | | | |||||||||||| |||| | ||||||| || | Sbjct 91786 AUUAUGAUGUAGGCUCCACCACUUGAGUAGACCUUAGAAAAGCACCCCUCCCAAGUGCAAUGGAGGCCACCUUUCUAGGCCAUGGGC 91872 Query 185 CUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||| ||||| || | |||||| |||||||||||| Sbjct 91873 CUUCAUGAUCACCCAUUGACCCCAUCCAGGUAAGUA 91908 >> URS00027F4F0D_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015032510.1) E-value: 1.7e-8 Identity: 64.06% Query coverage: 85.07% Gaps: 2.60% Alignment: Query 34 GGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--A 118 | | | | ||| | ||| || || |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | Sbjct 1310 GCAUCUGACUUUUGUUACAGGAAA-UGCCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCA 1396 Query 119 CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACC 205 ||||||| || | | || | | |||||||||||| | | | | | | || | ||| ||||||| || Sbjct 1397 UUUGGGGAAAUCGCAGGGGUCAGCACACCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCC 1484 Query 206 CCGUCCAGGUAAGUAU 221 || |||||||||||| Sbjct 1485 CCUGCCAGGUAAGUAU 1500 >> URS00009EE131_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 3.2e-8 Identity: 67.15% Query coverage: 61.99% Gaps: 0.00% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUA 174 ||| | ||||||||||||| || |||| | ||||| ||||| || || || | || ||||||| || ||| | || Sbjct 24 UCCCAUUGCCACAAAUUAUGAUGUAGGCUCUUCUACUUGAGGAGACCUUAGACAUACAUCUCUCCUAAUUGCAAUGGAAGUCAUCAACCUA 114 Query 175 GGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||| |||| ||||| || | | ||| || |||| ||||||| Sbjct 115 GGCCAUGGCCUUUCUUAAUUAUCUAUUGACUCCAUCCAAGUAAGUA 160 >> URS00024098B8_4155 Erythranthe guttata (spotted monkey flower) long non-coding RNA (EGUT_LNC002113) E-value: 2.7e-14 Identity: 66.67% Query coverage: 88.24% Gaps: 3.03% Alignment: Query 25 AAACAAGAGGGAC-CAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU 114 ||| | ||| | ||||||| |||| | ||| |||||||||||||||||||| ||||| | |||||| |||||| | Sbjct 147 AAAUUAAUGGGCCACAAAUUUAAAAU---AGAAAUGGGCAGGGGCCGCGCGAACGCAGGCCCCCACAGGAACAAAUAAUGACGGAGGAACA 234 Query 115 CCCACUUGGGGAGAUGGUAAACCAACGCGCUCACC--AAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGA 203 |||||||| || || | ||| | | |||||||| | || ||||||| ||||||||||| || ||| | || Sbjct 235 ACCACUUGGAUCGACCUUAGUCACGCGCCCCUCCUAUUUGUGCAAUGGAGGUCACGUGCCUAGGCCAUGGCCCUUCUUGUUCAGCCAUAGA 325 Query 204 CCCCGUCCAGGUAAGU 219 |||| ||||||||||| Sbjct 326 CCCCAUCCAGGUAAGU 341 >> URS0002397930_57918 Fragaria vesca (wild strawberry) long non-coding RNA (FVES_LNC001569) E-value: 5.4e-8 Identity: 69.59% Query coverage: 66.52% Gaps: 2.03% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC-CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAU 158 |||||| || |||| | |||||||||||| | || ||| | |||| ||||| ||| | | | | | | ||||||||| Sbjct 25106 GAACGCAAAC-CCCUUGGCAACAAAUUAUGACAUAGGCUAUCCCCUCUUGAGGAGACCUUAAGCAAGCACCCCUCCAAAGUGCAAU 25190 Query 159 GUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | || | ||||||| | |||||| |||| || | |||||| |||||||||||| Sbjct 25191 GGAGGUCACUAGCCUAGGCCAUGAGUCUUCUU-AUCGCCCAUUGACCCCAUCCAGGUAAGUA 25251 >> URS00023AB742_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC004242) E-value: 6.5e-8 Identity: 64.60% Query coverage: 72.85% Gaps: 1.24% Alignment: Query 60 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCAC 148 | ||||| || | ||| | | ||| | ||||||||| || ||| ||||||| | || || | |||| | | | Sbjct 942 AGUAGGGGUUGCACUAACACAAGUCUCCUAUGAUACAAAUUAUU--GUAGGUUCUGUCACUUGGACAAAUCUUAGAACAACACCCCUUC 1028 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | || ||||| || ||||| | ||||||| | |||| |||| || | |||||||| ||| |||||| Sbjct 1029 UAUGUCCAAUGAAAGUCAUUGCUCUAGGCCAUAGGCCUUUCAGAUCACCCAUUGACCCCGUGCAGAUAAGUA 1100 >> URS0002187585_50452 Arabis alpina U1 spliceosomal RNA E-value: 9.1e-8 Identity: 64.42% Query coverage: 71.95% Gaps: 6.75% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA----CUUGGGGAGAUGGUAAACCAACGCGCUCA 147 |||||| |||||||||| |||||||| |||||||| |||||| ||| | | | || | | | | | |||| Sbjct 2 UAGGGGCUGCGCGAACGCAAGCCCCCUCUGCCACAAAUAAUGACGCAGGAUCUAUAAAAGACCUUAGGCG-UAGCACCCUAACG------ 84 Query 148 CCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||| || || | || |||| ||| |||||| || ||||||||||||||||||| Sbjct 85 UUAUGUGCAAUGGAAGUCACUAGCCUAAACCACUAGUCUUAUUGAUCACGAGUUGACCCCGUCCAGGUAAGUA 157 >> URS00027EA41D_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015032510.1) E-value: 1.4e-7 Identity: 65.52% Query coverage: 76.92% Gaps: 2.30% Alignment: Query 52 AGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCA 138 | | || || |||||| |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | Sbjct 308 AAGGAAAUGCCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGU 397 Query 139 ACGCGCUCACCAAGUGCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || | | |||||||||||| | | | | | | || | ||| ||||||| |||| |||||||||||| Sbjct 398 CAGCACACCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 481 >> URS00027F3CD7_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034730.1) E-value: 1.4e-7 Identity: 65.52% Query coverage: 76.92% Gaps: 2.30% Alignment: Query 52 AGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCA 138 | | || || |||||| |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | Sbjct 275 AAGGAAAUGCCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGU 364 Query 139 ACGCGCUCACCAAGUGCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || | | |||||||||||| | | | | | | || | ||| ||||||| |||| |||||||||||| Sbjct 365 CAGCACACCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 448 >> URS0002187230_50452 Arabis alpina U1 spliceosomal RNA E-value: 1.8e-7 Identity: 65.24% Query coverage: 71.49% Gaps: 8.54% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUA-CCACAAAUUAUGACGUCCACUCUCCCA-----CUUGGGGAGAUGGUAAACCAACGCGCU 145 |||| |||||||||||| |||||||| |||||||| |||||| ||| | ||| || | | | | |||| Sbjct 2 UAGGGACCGCGCGAACGCAGGUCCCCUCUAGCCACAAAUAAUGACGCAGGUUCUUUAAAAGACCUUAGGCAUA--GC-ACCCAA-----C 83 Query 146 CACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | |||||||| | || | |||||||| ||||||||||| || |||||||||||||||||| Sbjct 84 CUUAUUGUGCAAUGGAAAUCACUAGCCUAGGCCACUCGUCUUCUUGAUCGCGAGUUGACCCCGUCCAGGUAAGU 157 >> URS00023F319C_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC004755) E-value: 1.8e-7 Identity: 62.82% Query coverage: 70.59% Gaps: 0.64% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACC 149 |||||||| | || || | | | || ||||||| |||| || ||| | ||||||| ||| ||| || | || || Sbjct 9871 GGGGGCCGCACAAAUGCAGAUUCUCACUCUCACAAAUAAUGAUGUAGGCUCAACUACUUGGGCUGAUCUUAAGCCGGAUCCCUUCCC 9957 Query 150 AAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAG 218 ||||| |||| || || | ||| || || ||||| |||| | | || ||||| |||| Sbjct 9958 AAGUGUAAUGAAAGUCACCAGUAGAGGGCAUGGGCCUUCAUGAUUUCCUAUUA-ACCAGUCCAAAUAAG 10025 >> URS0000E8A71B_10103 Mus spicilegus (steppe mouse) lncRNA (ENSMSIG00000021399.1) E-value: 4e-7 Identity: 64.11% Query coverage: 89.59% Gaps: 5.74% Alignment: Query 24 UAAACAAGAGGGACCA-AAUUUUAAAUUUAGGUA---AUUGGCAGGGG-CCGCGCGAACGC-GUACCCCCUCUACCACAAAUUAUGACGU 107 ||||||||| | | | | | ||| | || || |||||| ||||||||||| | ||||| ||||||||||||||| || Sbjct 696 GCCACAAGAGGGGAAAGUAAUCUGAUUUUCGUUACCAGUUAUCAGGGGAGCGCGCGAACGCAGCUCCCCCACUACCACAAAUUAUGCAGU 785 Query 108 CCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCA-CCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 | | | |||| | ||||||| || | | || | | | |||||||||| |||||| | | | || | ||||| ||| Sbjct 786 CGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCAAAGUGCAAUGGGUGAGCC-UCGCCCUGGGAAAACCACCUUCAUGA 874 Query 193 UCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || |||| |||||||||||| Sbjct 875 UCAUGGUAUCUCCCCUGCCAGGUAAGUAU 903 >> URS00027EAEDA_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034730.1) E-value: 7.6e-7 Identity: 64.46% Query coverage: 73.30% Gaps: 3.01% Alignment: Query 34 GGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--A 118 | | | | ||| | ||| || || |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | Sbjct 1320 GCAUCUGACUUUUGUUACAGGAAA-UGCCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCA 1406 Query 119 CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG 195 ||||||| || | | || | | |||||||||||| | | | | | | || | ||| ||||||| Sbjct 1407 UUUGGGGAAAUCGCAGGGGUCAGCACACCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCA 1484 >> URS00019A29E7_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.8e-6 Identity: 66.67% Query coverage: 60.63% Gaps: 2.90% Alignment: Query 86 CCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUA 174 || ||| ||||||||||||||| ||||||| |||||||| || | || |||||| ||| | ||| | || Sbjct 28 CCGCUAACACAAAUUAUGACGUAGGCUCUCCCUUACUGGGGAGACCUUAGAAUGGGGCAACUCCCAAGUACAACGGAGACCACCAACCUA 117 Query 175 GGCCACGGCCCUUCUUGAUCGGCCGUCGA---CCCCGUCCAGGUAAGU 219 ||||| || |||| ||||| || | || ||||||| |||||||| Sbjct 118 GGCCAUGGGCCUUUCUGAUCACCCAUUGACCACCCCGUCUAGGUAAGU 165 >> URS00021F0A53_8049 Gadus morhua (Atlantic cod) lncRNA (ENSGMOG00000031989.1) E-value: 2.4e-6 Identity: 63.44% Query coverage: 81.00% Gaps: 4.30% Alignment: Query 42 UUUUAAAUUU--AGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGG 125 | || | ||| | ||| |||||| |||||||||| ||||| ||||||||||||||| ||| | |||||| ||| || Sbjct 1782 UAUUUAUUUUCCACAAUAUUAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGAUUCCCACAUUUGAGG 1870 Query 126 AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | | | | || | | |||||||||| |||||| | | | || | ||||||||||| |||| ||| Sbjct 1871 AAUUCGCACGGGUCAGCACAGCCGAAGUGCAAUGGCUGAGCC-UCGCCCUGGGUGAACCACCUUCUUGAUCAUGGUGUCUCCCCUGCCA 1958 Query 213 GGUAAGUA 220 |||||||| Sbjct 1959 GGUAAGUA 1966 >> URS00021F454E_8049 Gadus morhua (Atlantic cod) lncRNA (ENSGMOG00000031989.1) E-value: 2.4e-6 Identity: 63.44% Query coverage: 81.00% Gaps: 4.30% Alignment: Query 42 UUUUAAAUUU--AGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGG 125 | || | ||| | ||| |||||| |||||||||| ||||| ||||||||||||||| ||| | |||||| ||| || Sbjct 1878 UAUUUAUUUUCCACAAUAUUAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGAUUCCCACAUUUGAGG 1966 Query 126 AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | | | | || | | |||||||||| |||||| | | | || | ||||||||||| |||| ||| Sbjct 1967 AAUUCGCACGGGUCAGCACAGCCGAAGUGCAAUGGCUGAGCC-UCGCCCUGGGUGAACCACCUUCUUGAUCAUGGUGUCUCCCCUGCCA 2054 Query 213 GGUAAGUA 220 |||||||| Sbjct 2055 GGUAAGUA 2062 >> URS0000A0C4FD_3821 Cajanus cajan (pigeon pea) U1 spliceosomal RNA E-value: 2.9e-6 Identity: 64.33% Query coverage: 71.04% Gaps: 0.00% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUG 154 | |||| | || | |||| ||| || ||||||| | || | |||| |||| |||||| ||||| || | ||||||| Sbjct 4 GAGGCCAUACAAAUAUAUGACCCCACUAUCAUAAAUUAUAAUGUAGAUUCUCUUACUUUAGGAGAUCUUAAACUCACACCUCUCCCAAGUG 94 Query 155 CAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||| || ||| || ||||||| ||| ||||| || | || || || | |||||| Sbjct 95 CAAUGAAAGUCAUCAAUCUAGGCCAUAAACCUAUAUGAUCAUCCAUUGAUCCUAUCUAAGUAAGUG 160 >> URS0001966DE8_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000041407.1) E-value: 3.7e-6 Identity: 58.30% Query coverage: 98.64% Gaps: 10.21% Alignment: Query 4 CUUAUCAAAGGGCCUGUAAGUAAACAAGA--GGGA-CCAAA-----UUUUAAAUUUAGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACC 84 | | ||||| || ||||||| | | || | | ||| || || | |||||| |||||||||| || Sbjct 193 CCUGACAAAGUAACUCUAAGUAAGCCUUAAAGGUUGCUUAGCUGUUUUUCUAACAAAGA---GAGUCAGGGGAGAGCGCGAACGCAGUCC 279 Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAU--- 167 ||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | | ||||||||| | |||| Sbjct 280 CCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCCCAUCCGGAGUGCAAUGGAUAAGCCUCGCC 369 Query 168 -UGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || | | | ||||| ||||| ||||| |||||||||||| Sbjct 370 CUGGGGGAAAC----CACCUUCGUGAUCAUGGAAUCACCCCUGCCAGGUAAGUAU 420 >> URS000234D4FB_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC014675) E-value: 4.1e-6 Identity: 65.69% Query coverage: 61.99% Gaps: 3.65% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGA 170 | || | | | | ||||||||| ||||| ||||| ||||||| ||| | | | | ||||||||| || || | Sbjct 14291 CUCCAGUGCAAUUAUUUAUGACGUAGACUCUUCCACU-GGGGAGACCUUAAGCUGGCACCUCUUCUAAGUGCAAUAAAAGUCACCAA 14376 Query 171 UGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||| | | ||||||||||| | ||||||||| ||||||||| Sbjct 14377 CCUAGGUUAUGAGCCUUCUUGAUC----AUUGACCCCGUCUAGGUAAGUA 14422 >> URS00027EAA88_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034996.1) E-value: 6e-6 Identity: 63.87% Query coverage: 68.33% Gaps: 4.52% Alignment: Query 44 UUAAAUUUAGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGA 128 || | | ||| |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| | Sbjct 2152 UUGUAACAA---GAUUACCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAA 2236 Query 129 UGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 | | | || | | |||||||||||| | | | | | | || | ||| ||||||| Sbjct 2237 UCGCAGGGGUCAGCACACCCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUGCUUGAUC 2303 >> URS00027F849A_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015032613.1) E-value: 6.4e-6 Identity: 61.78% Query coverage: 84.16% Gaps: 4.71% Alignment: Query 36 ACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACU 120 | | ||||||| | | | |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | | Sbjct 2975 GUCUAUUUUUAAACC---GCUAAAGUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUU 3059 Query 121 UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 |||||| || | | || | | ||||||||| | ||| | | | || | ||||| ||||| ||| Sbjct 3060 UGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGUGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCAUGAUCAUGGUAUCUCCC 3146 Query 207 CGUCCAGGUAAGUAU 221 | |||||||||||| Sbjct 3147 CUGCCAGGUAAGUAU 3161 >> URS00005495DF_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1e-5 Identity: 64.15% Query coverage: 70.59% Gaps: 1.89% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | |||||||||| ||||| ||| ||||||||||| ||| | | ||| || ||||||| || | | || | | |||||| Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUAACACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCAAGU 95 Query 154 GCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | | | | | | || | ||| ||||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00023798A7_3880 Medicago truncatula (barrel medic) long non-coding RNA (MTRU_LNC005856) E-value: 1e-5 Identity: 65.28% Query coverage: 65.16% Gaps: 3.47% Alignment: Query 78 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGC 164 || | |||| || | |||||||| || || |||| ||||||||| ||| ||| | | | | | | | |||||||| | Sbjct 47413 GCAUGCCCCUACUGCAACAAAUUACGAUGUAAACUCCACCACUUGGGCAGACCUUAAGCUAGCACCCCUCCAAGGUGCAAUGGAGGU 47499 Query 165 CAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || ||| | | || ||||||||||| | || || |||||||||||| Sbjct 47500 CACACGCCUAGACGAUGGGCCUUCUUGAUCA-----CAACACCUGCCAGGUAAGUAU 47551 >> URS00023903D5_3880 Medicago truncatula (barrel medic) long non-coding RNA (MTRU_LNC005858) E-value: 1e-5 Identity: 65.28% Query coverage: 65.16% Gaps: 3.47% Alignment: Query 78 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCA 166 || | |||| || | |||||||| || || |||| ||||||||| ||| ||| | | | | | | | |||||||| | || Sbjct 4615 GCAUGCCCCUACUGCAACAAAUUACGAUGUAAACUCCACCACUUGGGCAGACCUUAAGCUAGCACCCCUCCAAGGUGCAAUGGAGGUCA 4703 Query 167 UUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||| | | || ||||||||||| | || || |||||||||||| Sbjct 4704 CACGCCUAGACGAUGGGCCUUCUUGAUCA-----CAACACCUGCCAGGUAAGUAU 4753 >> URS0000571B74_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.2e-5 Identity: 64.15% Query coverage: 70.59% Gaps: 1.89% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | || | | ||| || Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCAGGU 95 Query 154 GCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | | | | | | || | ||| ||||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00027F0F42_10181 Heterocephalus glaber (naked mole-rat) lncRNA (ENSHGLG00000032664.1) E-value: 1.3e-5 Identity: 64.53% Query coverage: 75.57% Gaps: 3.49% Alignment: Query 55 UAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAA 139 ||| | |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | | Sbjct 1215 AAAUCGCCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUC 1302 Query 140 CGCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || | | ||||||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 1303 AGCACAUCCGGAGUGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 1385 >> URS000195DF28_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000041407.1) E-value: 1.5e-5 Identity: 62.50% Query coverage: 82.35% Gaps: 5.73% Alignment: Query 40 AAUUUUAAAUUUAGGU----AAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UU- 121 |||| | ||| || | || |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | || Sbjct 8 AAUUCUGCUUUUUUGUCACUAGUUAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUG 97 Query 122 GGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGU 209 ||||| || | | || | | ||||||||| | ||| | | | || | ||||| ||||| ||||| Sbjct 98 GGGGAAAUCGCAGGGGUCAGCCCAUCCGGAGUGCAAUGGAUAAGC-CUCGCCCUGGGGAAACCACCUUCGUGAUCAUGGAAUCACCCCUG 186 Query 210 CCAGGUAAGUAU 221 |||||||||||| Sbjct 187 CCAGGUAAGUAU 198 >> URS0000556B1B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.9e-5 Identity: 64.15% Query coverage: 70.59% Gaps: 1.89% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | |||||||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | || | | ||| || Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCACGU 95 Query 154 GCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | | | | | | || | ||| ||||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUGCUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00004EFDDC_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.5e-5 Identity: 63.52% Query coverage: 70.59% Gaps: 1.89% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | ||||| |||| ||||| ||| ||||||||||| ||| | | ||| || ||||||| || | | || | | |||||| Sbjct 6 GAGAGCGCGUACGCAGUCCCCCACUAACACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACGCCAAGU 95 Query 154 GCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | | | | | | || | ||| ||||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00023F67F9_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC022809) E-value: 2.8e-5 Identity: 55.45% Query coverage: 82.81% Gaps: 26.73% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGA-ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 126 |||| ||||||| || || |||||| || |||||||| ||||||||||||| |||| Sbjct 1008 GAAUUGUAAAUUU-------UGACAAGGGCCGGGCAUGGCGCGUACC-GCUCUACCACAAAUGAUGAU--------------------- 1067 Query 127 GAUGGUAAACCAACGCGCUCA-CCAAGUGCAAUGUG-----------------AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGC 197 | ||| || | || | |||||||||||| ||| | |||| || || || |||||| | Sbjct 1068 ------AGGCCAGUGCACCCAACAAAGUGCAAUGUGGAUGACGGGCCUGGGUGGACCACGGGCCUAGGGCAUGGAUUUUGUUGAUCACC 1150 Query 198 CGUCGACCCCGUCCAGGUAAGUAU 221 | | |||| ||||||||||||||| Sbjct 1151 CAUAGACCUCGUCCAGGUAAGUAU 1174 >> URS0002422A87_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC022805) E-value: 2.8e-5 Identity: 55.45% Query coverage: 82.81% Gaps: 26.73% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGA-ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 124 |||| ||||||| || || |||||| || |||||||| ||||||||||||| |||| Sbjct 56035 GAAUUGUAAAUUU-------UGACAAGGGCCGGGCAUGGCGCGUACC-GCUCUACCACAAAUGAUGAU------------------- 56094 Query 125 GAGAUGGUAAACCAACGCGCUCA-CCAAGUGCAAUGUG-----------------AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAU 193 | ||| || | || | |||||||||||| ||| | |||| || || || ||||| Sbjct 56095 --------AGGCCAGUGCACCCAACAAAGUGCAAUGUGGAUGACGGGCCUGGGUGGACCACGGGCCUAGGGCAUGGAUUUUGUUGAU 56173 Query 194 CGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | || | |||| ||||||||||||||| Sbjct 56174 CACCCAUAGACCUCGUCCAGGUAAGUAU 56201 >> URS00005A5A3F_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.2e-5 Identity: 63.52% Query coverage: 70.59% Gaps: 1.89% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | |||||||||| ||||| ||| ||||||||||| ||| | | ||| || ||||||| || | | || | | || ||| Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUAACACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCUAGU 95 Query 154 GCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | | | | | | || | ||| ||||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00023B1275_3711 Brassica rapa (field mustard) long non-coding RNA (BRAP_LNC004621) E-value: 3.3e-5 Identity: 67.21% Query coverage: 53.39% Gaps: 4.10% Alignment: Query 102 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCU----CACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUC 188 |||| ||||||| |||||||||| || | || |||| | |||||||||| | || | |||||||| |||| Sbjct 3 UGACACAGGCUCUCCCGCUUGGGGAGACCUUAGGCUAA-GCGCCCCUCCUUAAAGUGCAAUGGAGGUCACUAGCCUAGGCCACUCAUCUUC 92 Query 189 UUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 |||||| || ||||| |||||||||||| Sbjct 93 UUGAUCAUGAGUUGACCCUGUCCAGGUAAGU 123 >> URS000196770F_9544 Macaca mulatta (Macaque) lncRNA (ENSMMUG00000065044.1) E-value: 3.6e-5 Identity: 64.67% Query coverage: 73.30% Gaps: 3.59% Alignment: Query 60 GGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCU 145 | |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | | || | Sbjct 1209 GCCAGGGGAAAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACA 1297 Query 146 CACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | ||||||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 1298 UCCGGAGUGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 1374 >> URS000279B583_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 3.6e-5 Identity: 64.37% Query coverage: 76.02% Gaps: 4.02% Alignment: Query 54 GUAAUUGG-CAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAA 135 ||||| |||||| |||||||||| ||||| |||||| |||||||| ||| | |||||| ||||||| | | | Sbjct 10453 ACAAUUGAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAGUCGAGAUUCCCACAUUUGGGGAAUUCGCAGG 10538 Query 136 CCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 || | | ||||||||| |||||| | | | || | ||||||||||| |||| |||||||||| Sbjct 10539 GGUCAGCACAACCGGAGUGCAAUGGCUGAGCC-UCGCCCUGGGUGAACCACCUUCUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGU 10623 Query 220 AU 221 || Sbjct 10624 AU 10625 >> URS0000B5A9DE_3981 Hevea brasiliensis miscellaneous RNA E-value: 4.9e-5 Identity: 61.88% Query coverage: 80.09% Gaps: 2.21% Alignment: Query 45 UAAAUUUAGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGU 132 ||| | | |||| |||||| ||||| |||| ||||| |||||| |||||||| ||| | |||||| ||||||| | | Sbjct 12 UAAUUGAACAUAAUGAUCAGGGGAGAGCGCGGACGCAGUCCCCCACUACCAGAAAUUAUGCAGUCGAGAUUCCCACAUUUGGGGAAUUCGC 102 Query 133 AAACCAACGCGCUCACCAAGUGCAAUGUGA-GCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | || | | |||||||||| | | | | | || | ||||||||||| |||| |||||||||||| Sbjct 103 AGGGGUCAGCACAACCGAAGUGCAAUGGCUGGGCCUCGCCCUGGGUGAACCACCUUCUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 192 >> URS00003FE7E7_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.1e-5 Identity: 63.52% Query coverage: 70.59% Gaps: 1.89% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | ||||| |||| ||||| |||||||||||| || ||| | | ||| || ||||||| || | | || | | |||||| Sbjct 6 GAGAGCGCGGACGCAGUCCCCCACUACCACAAAUUUUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACCCCAAGU 95 Query 154 GCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | | | | | | || | ||| ||||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUGCUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS0002187493_50452 Arabis alpina U1 spliceosomal RNA E-value: 5.6e-5 Identity: 61.11% Query coverage: 71.49% Gaps: 7.41% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA----CUUGGGGAGAUGGUAAACCAACGCGCUCA 147 |||| |||||||||| | | |||||| |||||||| | || ||| | ||| || | | | | || Sbjct 2 UAGGGACCGCGCGAACACAGAUCCCCUCAGCCACAAAUACUAACACAGGAUCUAUAAAGACCUUAGGCA--UAGCACAC------UUAAC 83 Query 148 CCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | ||||||||| || || | |||||||| ||||| |||| || |||| ||||||||||||| Sbjct 84 CUUAGUGCAAUGGAAGUCACUAGCCUAGGCCACUCGUCUUCUAGAUCACGAGUUGACCUCGUCCAGGUAAGU 155 >> URS00009F15E0_3981 Hevea brasiliensis miscellaneous RNA E-value: 5.9e-5 Identity: 77.11% Query coverage: 37.56% Gaps: 2.41% Alignment: Query 38 CAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 120 ||| ||| | || ||||| ||||||||||||||||| ||||| || |||||||||||||||| |||||||||| Sbjct 204 CAACCUUUGACAGUAA--GAUUGGAAGGGGCCGCGCGAACGCAGGCCCCCACUGCCACAAAUUAUGACGUAGGCUCUCCCACU 284 >> URS0000306833_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.5e-5 Identity: 62.89% Query coverage: 70.59% Gaps: 1.89% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | ||||| |||| ||||| ||| |||||||| || ||| | | ||| || ||||||| || | | || | | |||||| Sbjct 6 GAGAGCGCGUACGCAGUCCCCCACUAACACAAAUUUUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACACGCCAAGU 95 Query 154 GCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | | | | | | || | ||| ||||||| |||| |||||||||||| Sbjct 96 GCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS0000CCF3A1_10116 Rattus norvegicus uncharacterized LOC102548522 E-value: 8.5e-5 Identity: 63.58% Query coverage: 71.49% Gaps: 3.09% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACC 149 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | | Sbjct 1463 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCG 1550 Query 150 AAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 1551 GAGUGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 1623 >> URS0000CCE1B8_10116 Rattus norvegicus uncharacterized LOC102548522 E-value: 1.1e-4 Identity: 63.58% Query coverage: 71.49% Gaps: 3.09% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | | | Sbjct 27 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGA 116 Query 152 GUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 117 GUGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 187 >> URS0000CCE7EB_10116 Rattus norvegicus uncharacterized LOC102548522 E-value: 1.1e-4 Identity: 63.58% Query coverage: 71.49% Gaps: 3.09% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | | | Sbjct 26 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGA 115 Query 152 GUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 116 GUGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 186 >> URS0000CD00C2_10116 Rattus norvegicus uncharacterized LOC102548522 E-value: 1.1e-4 Identity: 63.58% Query coverage: 71.49% Gaps: 3.09% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | | | Sbjct 26 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGA 115 Query 152 GUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 116 GUGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 186 >> URS0000CD02C3_10116 Rattus norvegicus uncharacterized LOC102548522 E-value: 1.1e-4 Identity: 63.58% Query coverage: 71.49% Gaps: 3.09% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | | | Sbjct 27 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGA 116 Query 152 GUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 117 GUGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 187 >> URS00021EE530_9541 Macaca fascicularis (Crab-eating macaque) lncRNA (ENSMFAG00000062077.1) E-value: 1.3e-4 Identity: 64.14% Query coverage: 63.80% Gaps: 3.45% Alignment: Query 54 GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAAC 140 || | ||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | | Sbjct 1195 ACAAAAGUCAGGGAAAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCA 1283 Query 141 GCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 || | | ||||||||| | ||| | | | || | ||||| ||||| Sbjct 1284 GCACAUCCGGAGUGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUC 1338 >> URS00027F8522_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015039313.1) E-value: 1.7e-4 Identity: 65.25% Query coverage: 61.99% Gaps: 2.84% Alignment: Query 58 UUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGC 144 || |||||| |||||||||| ||| | ||||||||||||||| ||| | | ||| || ||||||| || | | || | Sbjct 566 UUACCAGGGGAGAGCGCGAACGCAGUCCCUCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCAC 655 Query 145 UCACCAAGUGCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 | |||||||||||| | | | | | || | ||| ||||||| Sbjct 656 ACCCCAAGUGCAAUGGAUGGGCCUCGCCCUGGGAAAACCACCUGCUUGAUC 706 >> URS00023EA49C_3649 Carica papaya (papaya) long non-coding RNA (CPAP_LNC012237) E-value: 2e-4 Identity: 77.50% Query coverage: 35.75% Gaps: 1.25% Alignment: Query 87 CUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCA-ACGCGCUCACCAAGUGCAAUGUGAGCC 165 |||||||||||||||| || ||||||||| |||||| |||| || || | |||| || || ||||||||| || | Sbjct 68130 UACUACCACAAAUUAUGAUGUGCACUCUCCCUCUUGGGAAGAUCUUAGACUACACGCCCUUACUCAGUGCAAUGGAAGUC 68209 >> URS0000552793_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.5e-4 Identity: 63.35% Query coverage: 71.04% Gaps: 3.11% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 || |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | | || Sbjct 5 GGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAG 94 Query 153 UGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 95 UGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCAUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00004FB91C_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.8e-4 Identity: 63.13% Query coverage: 70.59% Gaps: 3.13% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | | ||| Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGU 95 Query 154 GCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 96 GCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00004FB91C_10116 Rattus norvegicus (Norway rat) non-coding RNA E-value: 2.8e-4 Identity: 63.13% Query coverage: 70.59% Gaps: 3.13% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | | ||| Sbjct 6 GAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGU 95 Query 154 GCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 96 GCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00021EE917_9103 Meleagris gallopavo (turkey) lncRNA (ENSMGAG00000022270.1) E-value: 3e-4 Identity: 63.91% Query coverage: 74.21% Gaps: 3.55% Alignment: Query 58 UUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCU 145 || |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | Sbjct 379 AUGUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACA 469 Query 146 CACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | |||||| | |||||| | | | || | ||| | ||||| |||| |||||||||||| Sbjct 470 CCCGGAGUGCAUGGGAUGAGCC-UCGCCCUGGGAAAACCACCUGCCUGAUCAUGGUGUCUCCCCUGCCAGGUAAGUAU 546 >> URS0001967D56_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005013713.1) E-value: 5.3e-4 Identity: 59.88% Query coverage: 71.95% Gaps: 1.85% Alignment: Query 62 CA-GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCAC 148 || ||| | || |||| || ||||| ||||||||||||||| ||| | | | | || ||||||| || | | || | | Sbjct 1628 CAGGGGACAGCACGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUCCCACAUUUGGGGAAAUCGCAGGAGUCAGCACAUCC 1716 Query 149 CAAGUGCAAUGUGAGCCAUUGAUGUAGG-CCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||| || || || || | || || ||||| |||| ||||||||||| Sbjct 1717 GGAGUGCAGUGGAUAAGCCUGGUGCUGGGAAAACCACCCUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUA 1789 >> URS00019727A1_9823 Sus scrofa (pig) lncRNA (ENSSSCG00060017060.1) E-value: 5.3e-4 Identity: 60.49% Query coverage: 71.04% Gaps: 4.32% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 ||| || || || || |||||||||| |||||||||| ||| | | |||||| ||||||| || | | | | | | || Sbjct 358 GGGAAAGCUCGCACACGGUCCCCCUCUACUACAAAUUAUGCAGUCAAGUUUCCCACAUUUGGGGAAAUUGCAGGGGUCAGAACACCCGGAG 448 Query 153 UGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGC---CGUCGACCCCGUCCAGGUAAGUA 220 |||| || ||| | | | || | || |||| ||| | ||| ||||||||||| Sbjct 449 UGCAUUGGGAGAGACUCGCCUUGGGAAA--ACCAUCUUCAUCAUCAAGGUAUCUUCCCUGCCAGGUAAGUA 517 >> URS00025EE840_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000058798.1) E-value: 6.6e-4 Identity: 59.88% Query coverage: 71.95% Gaps: 1.85% Alignment: Query 62 CA-GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 || ||| | || |||| || ||||| ||||||||||||||| ||| | | | | || ||||||| || | | || | | Sbjct 786 CAGGGGACAGCACGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUCCCACAUUUGGGGAAAUCGCAGGAGUCAGCACAUCCGG 876 Query 151 AGUGCAAUGUGAGCCAUUGAUGUAGG-CCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||| || || || || | || || ||||| |||| ||||||||||| Sbjct 877 AGUGCAGUGGAUAAGCCUGGUGCUGGGAAAACCACCCUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUA 947 >> URS00022B36DA_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000076968.1) E-value: 7.8e-4 Identity: 62.50% Query coverage: 70.59% Gaps: 3.13% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUG 154 | || ||||||| ||||| |||||||||||| || || | | |||||| ||||||| |||| | || | | |||| Sbjct 689 GAAAGCACGAACGCAGUCCCCCACUACCACAAAUUGUGCAGUUGAGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCAGCACAUCCGGAGUG 779 Query 155 CAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 780 CAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCAUGAUCAUGAUAUCUCCCCUGCCAGGUAAGUAU 847 >> URS0000AA251C_7955 Danio rerio (zebrafish) lncRNA CR385078.5 (ENSDARG00000096729.2) E-value: 1.3e-3 Identity: 61.25% Query coverage: 71.04% Gaps: 1.88% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 || |||||||||| ||||| |||||| |||||||| ||| | |||| | ||||||| | | | ||| | ||| Sbjct 27 GGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAGUCGAGAUUCCCACAUUUGGGGAAUUCGCAGGGGUCAGCGUGGCCGGAGU 117 Query 154 GCAAUGU-GAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||| | | | | | || | ||||||||||| |||| |||||||||||| Sbjct 118 GCAAUGGCCAAGCCUCGCCCUGGGUGAACCACCUUCUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 186 >> URS000007C241_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.6e-3 Identity: 62.73% Query coverage: 71.04% Gaps: 3.11% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 || |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| | | | || | | || Sbjct 5 GGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAGUUGGGGAACUCGCAUGGGUCAGCACAUCCGGAG 94 Query 153 UGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||| | ||| | | | || | ||||| ||||| |||| |||||||||||| Sbjct 95 UGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCAUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS000195F80A_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000041407.1) E-value: 1.6e-3 Identity: 68.87% Query coverage: 44.80% Gaps: 6.60% Alignment: Query 35 GACCAAAUUUUAAAUUUAGGU----AAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-- 117 | | ||||| | ||| || | || |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||| Sbjct 245 GUCAAAAUUCUGCUUUUUUGUCACUAGUUAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGC 334 Query 118 ACUUGGGGAGAUGGUA 133 | ||||||| || | | Sbjct 335 AUUUGGGGAAAUCGCA 350 >> URS00019A28BA_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.8e-3 Identity: 63.69% Query coverage: 70.59% Gaps: 3.82% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA-CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||||| ||||||||| ||| |||| ||||||| ||| |||||| | |||||||||| || | | || |||| Sbjct 5 GGGCCACGCGAACGCAAGCCC---CUACAACAAAUUGGAACGCAGGCUCUCCGAGCUUGGGGAGACCUUAGGGUAGU-CCUCCAAGAAGU 90 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||| || | |||| || | |||| | ||| | | |||||| ||||||| ||| Sbjct 91 GCAAUGG-AGGGGCAGCCCUAGGACAUGAGCCUUAGUCAUCACUCAUUGACCCCAUCCAGGUGAGUU 156 >> URS0000573EF2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.9e-3 Identity: 62.89% Query coverage: 70.14% Gaps: 3.14% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | |||||||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | | ||| Sbjct 6 GAGAGCGCGAACGCAGCCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGU 95 Query 154 GCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||| | |||| | | | || | ||||| ||||| |||| ||||||||| | Sbjct 96 GCAAUGGAUAAGCC-UCGCCCUGGGAAAGCCACCUUCGUGAUCAUGGAAUCUCCCCUGCCAGGUAAGGA 163 >> URS00009C5AED_9606 Homo sapiens long non-coding RNA NONHSAT214069.1 E-value: 2.8e-3 Identity: 56.98% Query coverage: 76.02% Gaps: 10.06% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 533 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGG-----AAUAUCACAGGG 618 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGC-----------CCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||| || | | | | || || |||| ||||| ||||| ||||| ||| ||||||||||| Sbjct 619 GUCAGCACAUCCG--GAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUAAGUA 704 >> URS00025F2D8C_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000107581.1) E-value: 2.9e-3 Identity: 56.85% Query coverage: 82.35% Gaps: 8.12% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGG----------CA-GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC 116 || || |||| || || | || ||| |||||||||| ||||| |||||| |||||||| || | | | Sbjct 4913 AAUGUUAAAAUGAUUGUUGUUAGACACCAAGAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCAUAAAUUAUGCAAUCGAGAUUUC 5001 Query 117 CAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUC 201 ||| ||||| | | | | || | | ||||||||| |||||| | || | ||||||||||| Sbjct 5002 CACAUUUGGGAAAUUCGCAGGGGUCAGCACAGCCGGAGUGCAAUGGCUGAGCCUCA-CCCUGGGUGAACCGCCUUCUUGAUCACGGUAU 5089 Query 202 GACCCCGUCCAGGUAAGUA 220 ||| ||||||||||| Sbjct 5090 CUCCCUUGCCAGGUAAGUA 5108 >> URS00027F7B0D_10181 Heterocephalus glaber (naked mole-rat) lncRNA (ENSHGLG00100035968.1) E-value: 2.9e-3 Identity: 65.67% Query coverage: 58.82% Gaps: 3.73% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | | || | | | Sbjct 73 GGGAGAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGA 162 Query 152 GUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAU 193 |||||||| | |||| | | | || | ||||| |||| Sbjct 163 GUGCAAUGGAUAAGCC-UCGCCCUGGGAAAACCACCUUCGUGAU 205 >> URS0000B22750_10116 Rattus norvegicus long non-coding RNA NONRATT000805.2 E-value: 4e-3 Identity: 63.55% Query coverage: 47.06% Gaps: 5.61% Alignment: Query 58 UUGGCA-GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGC 144 | || ||| |||||||||| ||||| ||||||| ||||||| ||| | | |||| | ||||||| || | || | Sbjct 161 U---CAGGGGAGAGCGCGAACGCAGUCCCCCACUACCACGAAUUAUGCAGUCGAGUUUCCCGCAUUUGGGGAAAUCACAGGGGUCAGCAC 247 Query 145 UCACCAAGUGCAAUGUG 161 | ||||||||| Sbjct 248 AUCCGGAGUGCAAUGGA 264 >> URS000195F489_158456 Betta splendens (Siamese fighting fish) lncRNA (ENSBSLG00000001132.1) E-value: 4.3e-3 Identity: 61.76% Query coverage: 74.66% Gaps: 5.88% Alignment: Query 56 AAUUGGCAG-GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 ||| ||| || |||||||||| ||||| |||||| |||||||| ||| | |||||| ||||||| | | | | Sbjct 62 AAU---CAGGGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAGUCGAGAUUCCCACAUUUGGGGAAUUCGCAGAGGUCA- 146 Query 142 CGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | ||||||||| |||||| | | | || | ||| | ||||| |||| ||||||||||| Sbjct 147 GACAGCCUCAGUGCAAUGGCUGAGCC-UCGCCCUGGGUGAACCACCUACAUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUA 226 >> URS00022AFA7B_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000086245.1) E-value: 4.5e-3 Identity: 60.80% Query coverage: 77.38% Gaps: 3.98% Alignment: Query 51 UAGGUAAUUGGCAGG-GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAAC 136 || ||| ||| | |||||||||| ||||| |||||||| |||||| ||| | | |||||| ||||||| || | | Sbjct 2102 UACAGAAUGAUAAGGGGAAAGCGCGAACGCAGUCCCCCACUACCACA-AUUAUGCAGUCAAGUUUCCCACAUUUGGGGAAAUCGCAGGG 2189 Query 137 CAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || | |||||||| | || | | | | || | ||||| ||||| |||| |||||||||||| Sbjct 2190 GUCAGCACAUCUGGAGUGCAAUAGAUAAG-CCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGGCAUCUCCCCUGCCAGGUAAGUAU 2275 >> URS00019559EC_9544 Macaca mulatta (Macaque) lncRNA (ENSMMUG00000055356.1) E-value: 5.6e-3 Identity: 69.39% Query coverage: 43.44% Gaps: 2.04% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | | || | | Sbjct 992 GGGAAAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGG 1080 Query 151 AGUGCAAUG 159 ||||||||| Sbjct 1081 AGUGCAAUG 1089 >> URS00023DA4EF_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC020820) E-value: 7.1e-3 Identity: 63.96% Query coverage: 50.23% Gaps: 6.31% Alignment: Query 14 GGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGA 104 ||| | | ||| || ||| | ||| | | | | | | || |||||| || ||||| | | ||| || ||||||||||||| Sbjct 138 GGCAUCUGAGUUAAACAGAA---AC-AAU-UGGAC--UUUGCAUUGGGUAGGGGCUGCACGAACACAGGCUCCCACUGCCACAAAUUAUGA 221 Query 105 CGUCCACUCUCCCACUUGGG 124 || ||| |||||||| Sbjct 222 UGUAGGCUCGGCCACUUGGA 241 >> URS00023CBD10_3708 Brassica napus (rape) long non-coding RNA (BNAP_LNC006930) E-value: 8.7e-3 Identity: 66.67% Query coverage: 46.15% Gaps: 3.92% Alignment: Query 41 AUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 127 | || || | | || || || || |||||||| || ||||| || |||||||| |||||| ||| ||||||||| || Sbjct 43459 AAUUGAACUGUUGGGAAAAGGAAGAGGCCGCGCAAA----UACCCUUGCUGCCACAAAUAAUGACGCAGGAUCUUCCACUUGGGAAG 43541 Query 128 AUGGUAAACCAACGC 142 | ||| | || | Sbjct 43542 ACCUUAAGCUAAGGG 43556 >> URS000196E5D3_7950 Clupea harengus (Atlantic herring) lncRNA (ENSCHAG00000004297.1) E-value: 1.1e-2 Identity: 59.88% Query coverage: 71.49% Gaps: 7.78% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU-----GGUAAACCAACGCGC 144 ||| |||||||||| |||| ||||||||||||||| ||| | | | || ||| | | | || | ||||| | Sbjct 1185 GGGGAUAGCGCGAACGCAGUCCCCAACUACCACAAAUUAUGCAGUCGAGAUUUCUACAUUUGAGAAAUUCGCACGGGUCAGCAACGGCC 1273 Query 145 UCACCAAGUGCAAUGU--GAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||| ||||| | | | || | ||||||||||| |||| ||||||||||| Sbjct 1274 ---GGUUGUGCAAUGGCCGAGCC-UCGCCAUGGGUGAACCACCUUCUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUA 1347 >> URS00022B1EE9_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000073652.1) E-value: 1.1e-2 Identity: 65.55% Query coverage: 52.49% Gaps: 3.36% Alignment: Query 45 UAAAUUUAGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUG 130 || ||||| | || |||||| || | ||| | ||||| |||||||||||| || ||||| | |||||| ||||||| || Sbjct 1838 UAUAUUUAUUUU-UUAUCAGGGGAAUGCACAAACACAGUCCCCCACUACCACAAAUUUUGCAGUCCAGUUUCCCACAUUUGGGGAAAUC 1925 Query 131 GUAAACCAACGCGCUCACCAAGUGCAAUGU 160 | | || | | ||||||||| Sbjct 1926 GCAGGGGUCAGCACAUCCGGAGUGCAAUGG 1955 >> URS0001A1903D_74940 Oncorhynchus tshawytscha (Chinook salmon) lncRNA (ENSOTSG00005038996.1) E-value: 1.3e-2 Identity: 62.65% Query coverage: 72.40% Gaps: 4.82% Alignment: Query 62 CAG-GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUC 146 ||| || |||||||||| ||||| |||||| |||||||| || | | |||| ||| | | | | | || | Sbjct 1164 CAGGGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAAUCGAGAUUUCCACAUUUGAGAAAUUCGCAGGGGUCAGCACAG 1251 Query 147 ACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGC-CGUCGACCCCGUCCAGGUAAGUAU 221 | ||||||||| |||||| | | | || | ||||||||||| ||| ||| |||||||||||| Sbjct 1252 CCGGAGUGCAAUGGCUGAGCC-UCGCCCUGGGUGAACCGCCUUCUUGAUCACGGUGUC-UCCCUUGCCAGGUAAGUAU 1327 >> URS0001A1CCBE_74940 Oncorhynchus tshawytscha (Chinook salmon) lncRNA (ENSOTSG00005038996.1) E-value: 1.3e-2 Identity: 62.65% Query coverage: 72.40% Gaps: 4.82% Alignment: Query 62 CAG-GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUC 146 ||| || |||||||||| ||||| |||||| |||||||| || | | |||| ||| | | | | | || | Sbjct 1112 CAGGGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCAAUCGAGAUUUCCACAUUUGAGAAAUUCGCAGGGGUCAGCACAG 1199 Query 147 ACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGC-CGUCGACCCCGUCCAGGUAAGUAU 221 | ||||||||| |||||| | | | || | ||||||||||| ||| ||| |||||||||||| Sbjct 1200 CCGGAGUGCAAUGGCUGAGCC-UCGCCCUGGGUGAACCGCCUUCUUGAUCACGGUGUC-UCCCUUGCCAGGUAAGUAU 1275 >> URS0002351361_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001167) E-value: 1.5e-16 Identity: 69.36% Query coverage: 78.28% Gaps: 0.58% Alignment: Query 49 UUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACC 137 |||| ||||| |||||| |||||||||| ||||| || | |||||||||||||| ||| |||||||| || || Sbjct 2094 UUUAA-AUAUUGGUAGGGGCUGCGCGAACGCAAGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCGACCACUUGGAUCGACCUUAGGUA 2181 Query 138 AACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | | | |||||||||| | || | |||| || || ||| ||||||| || | |||| ||||||||||||||| Sbjct 2182 GGCACCCCUCCUAAGUGCAAUGGAGGUCACAAACCUAGGUCAUGGGUCUUAUUGAUCGCCCAUUGACCUCGUCCAGGUAAGUAU 2265 >> URS00023BA24C_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001167) E-value: 1.5e-16 Identity: 69.36% Query coverage: 78.28% Gaps: 0.58% Alignment: Query 49 UUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACC 137 |||| ||||| |||||| |||||||||| ||||| || | |||||||||||||| ||| |||||||| || || Sbjct 2073 UUUAA-AUAUUGGUAGGGGCUGCGCGAACGCAAGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCGACCACUUGGAUCGACCUUAGGUA 2160 Query 138 AACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | | | |||||||||| | || | |||| || || ||| ||||||| || | |||| ||||||||||||||| Sbjct 2161 GGCACCCCUCCUAAGUGCAAUGGAGGUCACAAACCUAGGUCAUGGGUCUUAUUGAUCGCCCAUUGACCUCGUCCAGGUAAGUAU 2244 >> URS00024185A0_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001167) E-value: 1.5e-16 Identity: 69.36% Query coverage: 78.28% Gaps: 0.58% Alignment: Query 49 UUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACC 137 |||| ||||| |||||| |||||||||| ||||| || | |||||||||||||| ||| |||||||| || || Sbjct 2138 UUUAA-AUAUUGGUAGGGGCUGCGCGAACGCAAGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCGACCACUUGGAUCGACCUUAGGUA 2225 Query 138 AACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | | | |||||||||| | || | |||| || || ||| ||||||| || | |||| ||||||||||||||| Sbjct 2226 GGCACCCCUCCUAAGUGCAAUGGAGGUCACAAACCUAGGUCAUGGGUCUUAUUGAUCGCCCAUUGACCUCGUCCAGGUAAGUAU 2309 >> URS00001C82F3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.5e-2 Identity: 60.24% Query coverage: 70.59% Gaps: 6.02% Alignment: Query 66 GGCCGCGCGAACGCGUACCC-------CCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | |||||||||| ||| || | |||||||| |||| ||| | | |||| | ||| ||| || | | || | | Sbjct 6 GAGAGCGCGAACGCAGUCCCCCCACCACCACCACCACAAACUAUGCAGUCGAGUUUCCCUAAUUUGAGGAAAUCGCAGGGGUCAGCACAC 95 Query 147 ACCAAGUGCAAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||||||||| | | | | | | || | ||| ||||||| |||| |||||||||||| Sbjct 96 CCCAAGUGCAAUGGGUGGGCCUCGCCCUGGGAAAACCACCUGCUUGAUCAUGGUGUCUCCCCUGCCAGGUAAGUAU 171 >> URS0000A846DF_10090 Mus musculus (mouse) predicted gene, 48281 E-value: 1.6e-2 Identity: 63.97% Query coverage: 59.73% Gaps: 3.68% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||| ||||||| || |||||| |||| |||||||||| ||| | | ||| ||||||| || || | | || | | Sbjct 22 GGGGAGAGCGCGAAUGCAGACCCCCACUACAACAAAUUAUGCAGUCGAGUUUCCCUCACUUGGAGAAAUCGCAGGGGUCAGCACAUCCGG 111 Query 151 AGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||||||||| | || | | || | || | ||||| ||||| Sbjct 112 AGUGCAAUGGAUAAG-CCUCGACCUGGGAAAACCACCUUCGUGAUC 156 >> URS000044F42B_9606 Homo sapiens (human) WEE2 antisense RNA 1 (ENSG00000261994.5) E-value: 1.9e-2 Identity: 57.06% Query coverage: 71.95% Gaps: 10.59% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | ||| || | Sbjct 34 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGG-----AAUAUCACAGGGGUCAGCACAU 119 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGC-----------CCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | | || || |||| ||||| ||||| ||||| ||| |||||||||||| Sbjct 120 CCG--GAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUAAGUAU 196 >> URS0000D57143_9606 Homo sapiens (human) non-protein coding WEE2-AS1:14 E-value: 2e-2 Identity: 57.06% Query coverage: 71.95% Gaps: 10.59% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | ||| || | Sbjct 33 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGG-----AAUAUCACAGGGGUCAGCACAU 118 Query 154 GCAAUGUGAGCCAUUGAUGUAGGCCACGGC-----------CCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | | || || |||| ||||| ||||| ||||| ||| |||||||||||| Sbjct 119 CCG--GAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUAAGUAU 195 >> URS0000D5D2EC_9606 Homo sapiens (human) non-protein coding WEE2-AS1:26 E-value: 2e-2 Identity: 56.00% Query coverage: 74.21% Gaps: 10.29% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 650 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGG-----AAUAUCACAGGG 735 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGC-----------CCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUA 216 ||| || | | | | || || |||| ||||| ||||| ||||| ||| ||||||| Sbjct 736 GUCAGCACAUCCG--GAGUGCAAUCGAUGAGCCCCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUA 817 >> URS0000B23C9D_9598 Pan troglodytes long non-coding RNA NONPTRT016410.1 E-value: 2.2e-2 Identity: 59.20% Query coverage: 76.02% Gaps: 4.60% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | Sbjct 567 UGUAAUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAG 657 Query 142 CGCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACG--GCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | | |||||||| |||||| | | | || | ||||| ||||| ||| ||||||||||| Sbjct 658 CACAUCCGGAGUGCAAUCGAUGAGCC--UCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUAAGUA 738 >> URS000017D295_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.3e-2 Identity: 58.49% Query coverage: 70.59% Gaps: 1.89% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 || ||| ||| || ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | || | || Sbjct 5 GGAGAGCGUGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCUCAUUUGGGGAAAUCUCAGGGGACAGCAUAUCCAGAG 94 Query 153 UGCAAUGUGAGCCAUUGAUGUAGGCC-ACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | ||||| | | | || | ||||| ||||| |||| ||||||||||| Sbjct 95 UACAAUGGGUAAGUCUCACCCUGGAAAAACCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUA 163 >> URS00022B6AE0_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000076968.1) E-value: 2.5e-2 Identity: 63.64% Query coverage: 57.92% Gaps: 3.79% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUG 154 | || ||||||| ||||| |||||||||||| || || | | |||||| ||||||| |||| | || | | |||| Sbjct 405 GAAAGCACGAACGCAGUCCCCCACUACCACAAAUUGUGCAGUUGAGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCAGCACAUCCGGAGUG 495 Query 155 CAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAU 193 ||||| | |||| | | | || | ||||| |||| Sbjct 496 CAAUGGAUAAGCC-UCGCCCUGGGAAAACCACCUUCAUGAU 535 >> URS00001D4BE1_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.6e-2 Identity: 58.23% Query coverage: 69.68% Gaps: 2.53% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC---CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 | || |||||| ||||| ||||||||||||||| ||| | | ||| || ||||||| || | | || | || Sbjct 6 GAGAGCAUGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCUCCAUUUGGGGAAAUUGCAGGGGUUAGCACAUCUGGAG 95 Query 153 UGCAAUGUG-AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 |||||| | | | | || | ||||| ||||| |||| |||||||||| Sbjct 96 UGCAAUAGAUAAGACUCGCCCUGGGAAAACCACCUUCAUGAUCAUGGUAUCUCCCCUGCCAGGUAAGU 163 >> URS00019779A8_9823 Sus scrofa (pig) lncRNA (ENSSSCG00045013540.1) E-value: 2.8e-2 Identity: 64.71% Query coverage: 45.70% Gaps: 0.98% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 ||| || || || || |||||||||| |||||||||| ||| | | | | || ||||||| || | | | | | | || Sbjct 351 GGGGAAAGCUCGCACACGGUCCCCCUCUACUACAAAUUAUGCAGUCAAUUUCCCACAUUUGGGGAAAUUGCAGGGGUCAGAACACCCGGAG 441 Query 153 UGCAAUGUGAG 163 |||| || ||| Sbjct 442 UGCAUUGGGAG 452 >> URS000236BBCC_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC015037) E-value: 2.9e-2 Identity: 55.45% Query coverage: 87.78% Gaps: 5.45% Alignment: Query 26 AACAAGAGGGACCAAAUUUU-AAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC 111 | | | | |||||| || | |||| |||| | || || | | || | | | ||| ||||||||||||||| | Sbjct 10798 GGCCAUAUAGCCCAAAUAUUUGGACUUAG--AAUUUGAUAGGCCCAUGGGGACACAAAU-UCUGCUAUCACAAAUUAUGACGUAAGC 10881 Query 112 UCUCCCACUUGGGGA-------GAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUG 191 ||| |||||| || |||| ||| ||| | | || | | | | | | || | ||| |||| | | Sbjct 10882 UCUACCACUUAGGUCGAUCAUCGAUGUUAAGAUGGCGCCUUUUCAAAACACCACGAAGGUCGUCCUCCUAAGUUACGAACCUUUUGG 10968 Query 192 AUCGGCCGUCGACCCCGUCCAGGUAAGU 219 |||| | ||| | | |||||| | Sbjct 10969 AUCGCUCAGAGACUUCAUUUAGGUAAAU 10996 >> URS00022B7946_10116 Rattus norvegicus (Norway rat) uncharacterized LOC103691943 (ENSRNOG00000065838.1) E-value: 3.7e-2 Identity: 60.98% Query coverage: 71.49% Gaps: 4.27% Alignment: Query 57 AUUGGCAGGGGC-CGCGC-GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGC 142 ||| ||| || |||| || ||| ||||| ||||||||||||||| ||| | ||| || ||||||| || | | | Sbjct 500 UUUGCCAGAGGAGAGCGCGGAUCGCAGUCCCCCACUACCACAAAUUAUGCAGUCGCUUUUCCUGCAUUUGGGGAAAUCGCAGGGGUCAAC 589 Query 143 GCUCACCAAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGG 214 | | ||||||||| | || | | | | || | ||||| ||||| | | |||| ||||| Sbjct 590 ACAUCCGGAGUGCAAUGGAUAAG-CCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGCUACCUCCCCUUCCAGA 662 >> URS00000D11A2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.8e-2 Identity: 61.11% Query coverage: 71.49% Gaps: 3.09% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| | ||| ||| || ||||| ||||| | ||||||| ||| | | ||| || ||||||| || | | || | | | Sbjct 4 GGGACAGCGAGAAUGCAGUCCCCCACUACCCCGAAUUAUGCAGUCUAGUUUCCUGCAGUUGGGGAAAUCGCAGGGGUCAGCACAUCCAGA 93 Query 152 GUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 |||||||| | ||| | | | || | ||||| |||| |||| |||||||||||| Sbjct 94 GUGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUUAUGGCAUCUCCCCUGCCAGGUAAGUAU 164 >> URS00023B8020_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007720) E-value: 3.8e-2 Identity: 63.64% Query coverage: 49.77% Gaps: 0.91% Alignment: Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGU 173 || | ||||||||||||||| | ||||||| ||| ||| | ||| | ||||| |||| || ||| | | Sbjct 4077 CCUAUUGUCACAAAUUAUGACGUAAGUUUAAUGACUUGGGUCGAUCUUAAGCAAACCACACUCCAAAGUGAAAUGGAAGUCAUCAACCU 4165 Query 174 AGGCCACGGCCCUUCUUGAUC 194 |||||| |||| | | ||||| Sbjct 4166 AGGCCAUGGCCUUAC-UGAUC 4185 >> URS000022CFA6_9606 Homo sapiens (human) WEE2 antisense RNA 1 (WEE2-AS1) E-value: 3.9e-2 Identity: 59.38% Query coverage: 57.92% Gaps: 5.47% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 208 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 293 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCAC 180 ||| || | | | || || |||| |||| Sbjct 294 GUCAGCACAUCCGG--AGUGCAAUCGAUGAGCCCCAC 328 >> URS00025378FF_9606 Homo sapiens (human) ncRNA E-value: 3.9e-2 Identity: 59.38% Query coverage: 57.92% Gaps: 5.47% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 208 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 293 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCAC 180 ||| || | | | || || |||| |||| Sbjct 294 GUCAGCACAUCCGG--AGUGCAAUCGAUGAGCCCCAC 328 >> URS00001059DE_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.3e-2 Identity: 61.59% Query coverage: 66.97% Gaps: 7.28% Alignment: Query 73 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU 160 | ||||| ||||| ||||||||| ||||| ||||| | ||| || ||||||| || || | | || ||||||||| Sbjct 13 CAAACGCAGUCCCCCACUACCACAAUUUAUGCAGUCCAGUUUCCUGCAUUUGGGGA-------AAUCACAGGGAUCU-UGAGUGCAAUGG 94 Query 161 G-AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | | || ||| | |||| ||||| |||| ||||||||||| Sbjct 95 AUAAGUCUCGCCGUGGGCAAACCACCUUUGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGUA 155 >> URS00001CE4D3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.1e-2 Identity: 63.45% Query coverage: 63.80% Gaps: 3.45% Alignment: Query 79 CGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAG-CC 165 || ||||| ||||||||||||||| || | | ||| | ||||||| || || | | | | ||| ||||| || | | Sbjct 20 AGUCCCCCCACUACCACAAAUUAUGCAGUUGAGUUUCCUGAAUUUGGGGAAAUCACAAGGAUAAGUAUACCCUAAGAGCAAUAUGUGGGC 109 Query 166 AUUGAUGUAGGCCACGGCCCUUCUUGAUCG-GCCGUCGACCCCGUCCAGGUAAGU 219 ||| |||| | ||| ||||| | | ||| |||| |||||||||| Sbjct 110 CUUGUCCUAGGAAAACUACCUACUUGAACAUGGUGUC-CCCCCUGCCAGGUAAGU 163 >> URS0000D4265F_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 5.2e-2 Identity: 59.51% Query coverage: 71.95% Gaps: 2.45% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | || | | | Sbjct 34 GGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACAUCCGGA 124 Query 152 GUGCAAU--GUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||| |||||| | | | ||||| ||||| ||| |||||||||||| Sbjct 125 GUGCAAUCGAUGAGCCUCACACUGGGAAAAACCACCUUCGUGAUCAUGAUAUCUUCCCUGCCAGGUAAGUAU 196 >> URS0001953441_158456 Betta splendens (Siamese fighting fish) lncRNA (ENSBSLG00000002776.1) E-value: 5.2e-2 Identity: 60.63% Query coverage: 56.56% Gaps: 3.15% Alignment: Query 35 GACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUU 121 ||| | || ||| | |||| | | |||||||| | ||||| |||||| |||||||| ||| | ||| || || Sbjct 174 GACAAUAUCUUAUGAACACUUAAUCAGAG--GAGAGCGCGAACACAGUCCCCCACUACCAGAAAUUAUGCAGUCAAGAUUCCCACAUUU 260 Query 122 GGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG 159 |||||||| | | | | || ||||||| | Sbjct 261 GGGGAGAUCGCAGAACCUGUUUCUACGGUAGUGCAAAG 298 >> URS000198F701_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00030007386.1) E-value: 5.7e-2 Identity: 77.78% Query coverage: 31.22% Gaps: 4.17% Alignment: Query 62 CAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUG 130 |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || Sbjct 3243 CAGGGGAAAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUC 3314 >> URS000199726B_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00030007234.1) E-value: 5.7e-2 Identity: 77.78% Query coverage: 31.22% Gaps: 4.17% Alignment: Query 62 CAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUG 130 |||||| |||||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || Sbjct 2891 CAGGGGAAAGCGCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUC 2962 >> URS00023772B6_59689 Arabidopsis lyrata (A. lyrata) long non-coding RNA (ALYR_LNC000924) E-value: 5.9e-2 Identity: 55.28% Query coverage: 69.23% Gaps: 24.84% Alignment: Query 65 GGGCCGCGCGAACGCGUA--------CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGC 144 || || |||| || | |||||||| |||||||| || |||| ||||||| | Sbjct 950 GG---GCACGAAAGCAAACCCCCCUCCCCCCUCUGCCACAAAUAAUAACGUAGACUCUCCAGCG------------------------ 1010 Query 145 UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAA 217 | |||||||| | | |||| | |||| ||| ||| ||||||| ||||||| |||| |||| Sbjct 1011 ---UUAUGUGCAAUGCG-GUCAUUAACCUAGGUCACUCGUCUUAUUGAUCGCGAGUCGACC-UGUCCGAGUAA 1078 >> URS0002337C39_9606 Homo sapiens (human) HSALNT0314337 E-value: 7.8e-2 Identity: 64.49% Query coverage: 47.06% Gaps: 2.80% Alignment: Query 55 UAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGC 142 || || |||||| | || || || |||| ||||||||||||||| ||| | | |||||| ||||||| || | | || Sbjct 703 AAAAUGCCAGGGGAGAGUGCAAAUGCAGUUCCCCAUUACCACAAAUUAUGAAGUCGAGUUUCCCACCUUUGGGGAAAUUGCAGGGAUCAGC 793 Query 143 GCUCACCAAGUGCAAU 158 | | ||| |||| Sbjct 794 ACAUCCAGAGUACAAU 809 >> URS0002345734_9606 Homo sapiens (human) HSALNT0314335 E-value: 7.8e-2 Identity: 64.49% Query coverage: 47.06% Gaps: 2.80% Alignment: Query 55 UAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGC 142 || || |||||| | || || || |||| ||||||||||||||| ||| | | |||||| ||||||| || | | || Sbjct 891 AAAAUGCCAGGGGAGAGUGCAAAUGCAGUUCCCCAUUACCACAAAUUAUGAAGUCGAGUUUCCCACCUUUGGGGAAAUUGCAGGGAUCAGC 981 Query 143 GCUCACCAAGUGCAAU 158 | | ||| |||| Sbjct 982 ACAUCCAGAGUACAAU 997 >> URS00001E3B9F_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 235 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 320 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 321 GUCAGCACAUCCGG--AGUGCAAUCGAUG 347 >> URS000038C235_9606 Homo sapiens (human) WEE2 antisense RNA 1 (ENSG00000261994.5) E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 383 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 468 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 469 GUCAGCACAUCCGG--AGUGCAAUCGAUG 495 >> URS00003A8D2C_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 230 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 315 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 316 GUCAGCACAUCCGG--AGUGCAAUCGAUG 342 >> URS00004D2697_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 149 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 234 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 235 GUCAGCACAUCCGG--AGUGCAAUCGAUG 261 >> URS0000D56D8C_9606 Homo sapiens (human) non-protein coding WEE2-AS1:16 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 208 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 293 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 294 GUCAGCACAUCCGG--AGUGCAAUCGAUG 320 >> URS0000D5770B_9606 Homo sapiens (human) non-protein coding WEE2-AS1:20 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 208 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 293 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 294 GUCAGCACAUCCGG--AGUGCAAUCGAUG 320 >> URS0000D581D3_9606 Homo sapiens (human) non-protein coding WEE2-AS1:24 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 650 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 735 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 736 GUCAGCACAUCCGG--AGUGCAAUCGAUG 762 >> URS0000D58F71_9606 Homo sapiens (human) non-protein coding WEE2-AS1:13 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 208 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 293 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 294 GUCAGCACAUCCGG--AGUGCAAUCGAUG 320 >> URS0000D593B1_9606 Homo sapiens (human) non-protein coding WEE2-AS1:23 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 459 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 544 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 545 GUCAGCACAUCCGG--AGUGCAAUCGAUG 571 >> URS0000D5C6DE_9606 Homo sapiens (human) non-protein coding WEE2-AS1:25 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 650 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 735 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 736 GUCAGCACAUCCGG--AGUGCAAUCGAUG 762 >> URS0000D5D0AC_9606 Homo sapiens (human) non-protein coding WEE2-AS1:15 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 838 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 923 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 924 GUCAGCACAUCCGG--AGUGCAAUCGAUG 950 >> URS0000EB071B_9606 Homo sapiens (human) HSALNT0129943 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACG 141 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | Sbjct 906 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAG 989 Query 142 CGCUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 | ||| || | | | || || |||| Sbjct 990 GGGUCAGCACAUCCGG--AGUGCAAUCGAUG 1018 >> URS0000EC20E1_9606 Homo sapiens (human) HSALNT0129942 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 732 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 817 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 818 GUCAGCACAUCCGG--AGUGCAAUCGAUG 844 >> URS0000EEB819_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 163 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 248 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 249 GUCAGCACAUCCGG--AGUGCAAUCGAUG 275 >> URS0000EF3174_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 67 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 152 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 153 GUCAGCACAUCCGG--AGUGCAAUCGAUG 179 >> URS0000EF52DF_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 383 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 468 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 469 GUCAGCACAUCCGG--AGUGCAAUCGAUG 495 >> URS0002268910_9606 Homo sapiens (human) PREDICTED lncRNA (TCONS_00247420) E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 383 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 468 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 469 GUCAGCACAUCCGG--AGUGCAAUCGAUG 495 >> URS0002346E22_9606 Homo sapiens (human) HSALNT0343809 E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 215 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 300 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 301 GUCAGCACAUCCGG--AGUGCAAUCGAUG 327 >> URS00025104C7_9606 Homo sapiens (human) ncRNA E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 163 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 248 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 249 GUCAGCACAUCCGG--AGUGCAAUCGAUG 275 >> URS0002511ED8_9606 Homo sapiens (human) ncRNA E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 383 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 468 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 469 GUCAGCACAUCCGG--AGUGCAAUCGAUG 495 >> URS0002520495_9606 Homo sapiens (human) non-coding RNA E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 149 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 234 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 235 GUCAGCACAUCCGG--AGUGCAAUCGAUG 261 >> URS00025468C4_9606 Homo sapiens (human) ncRNA E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 215 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 300 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 301 GUCAGCACAUCCGG--AGUGCAAUCGAUG 327 >> URS0002563078_9606 Homo sapiens (human) ncRNA E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 235 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 320 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 321 GUCAGCACAUCCGG--AGUGCAAUCGAUG 347 >> URS0002587614_9606 Homo sapiens (human) ncRNA E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 149 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 234 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 235 GUCAGCACAUCCGG--AGUGCAAUCGAUG 261 >> URS00025B9314_9606 Homo sapiens (human) non-coding RNA E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 163 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 248 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 249 GUCAGCACAUCCGG--AGUGCAAUCGAUG 275 >> URS00025DEF48_9606 Homo sapiens (human) ncRNA E-value: 8.1e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 230 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 315 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 316 GUCAGCACAUCCGG--AGUGCAAUCGAUG 342 >> URS000010E80F_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.1e-2 Identity: 59.75% Query coverage: 67.87% Gaps: 8.81% Alignment: Query 71 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA-------AGU 153 || ||| ||||| ||||||||||||||| ||| | | |||||| | || | ||| | | | ||| || ||| Sbjct 11 AGCAAACAAAGUCCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCACAUUUGGG----GGAAAUCGCAGGGGUCAACACAUCCGGAGU 96 Query 154 GCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||| | |||| | | || | ||||| |||||| ||| ||||||||||| Sbjct 97 GCAAUGGAUAAGCCUCUCC-CUGGGAAAGCCACCUUCCUGAUCGUGGUAUCUCCCAUGCCAGGUAAGUA 164 >> URS0002610446_6850 Limulus polyphemus (Atlantic horseshoe crab) leukocyte elastase inhibitor A-like, transcript variant X3 E-value: 8.1e-2 Identity: 65.22% Query coverage: 59.28% Gaps: 7.97% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU--CCCA-CUUGGGGAGAUGGUAAA--CCAACGCGCUCACC 149 ||| |||||||||| ||||| |||||| |||||| ||| | ||| |||| |||||| ||| | |||| | || Sbjct 31 GGGAUAGCGCGAACGCAGUCCCCCACUACCAAAAAUUACA-CGUUCCAUCUGCCCCAGUUUGGGGUAGUGGCAGGGGUCAACUCAAUC--A 118 Query 150 AAGUGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||||||||| |||||| || | || | ||||||||||| Sbjct 119 GAGUGCAAUGAAUGAGCCUUUCCC-UGGGGAAGCCACCUUCUUGAUC 164 >> URS0000D5B83B_9606 Homo sapiens (human) non-protein coding WEE2-AS1:9 E-value: 8.3e-2 Identity: 60.00% Query coverage: 54.30% Gaps: 5.83% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCG 143 |||||| ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | Sbjct 612 UGUAAUUCAUGGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGG 697 Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUG 172 ||| || | | | || || |||| Sbjct 698 GUCAGCACAUCCGG--AGUGCAAUCGAUG 724 >> URS000028A5AF_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.3e-2 Identity: 59.01% Query coverage: 69.23% Gaps: 4.97% Alignment: Query 67 GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUG 154 | || ||||| ||||| |||||||||||||| || | | ||| || ||||||| || | || || | | |||| Sbjct 7 AGAGUGCAAACGCAGUCCCCCAAUACCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUGGGGAAAUUGCAAGGGUCGGCACAUCCAGAGUG 96 Query 155 CAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGG--CCGUCGACCCCG--UCCAGGUAAGU 219 ||||| | |||| | | || | ||||| ||||| | ||||| | ||||||| Sbjct 97 CAAUGGAUAAGCCUUGCCUUGAGAAAAAACACCUUCGUGAUCAUGGUACCCCCCCCCGCCACUGGGUAAGU 167 >> URS0000CDD822_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 1e-1 Identity: 64.10% Query coverage: 51.13% Gaps: 3.42% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | Sbjct 208 UGUAAUUCAUGGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAG 298 Query 142 CGCUCACCAAGUGCAAU--GUGAGCC 165 | | | |||||||| |||||| Sbjct 299 CACAUCCGGAGUGCAAUCGAUGAGCC 324 >> URS000019840B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e-1 Identity: 60.71% Query coverage: 61.99% Gaps: 2.14% Alignment: Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGA 170 |||| ||||||||||||||| ||| | | ||| || ||||||| || | | || | |||||||||||| | | Sbjct 19 UCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCUGCAUUUGGGGAAAUCGAAGGGGUCAGCACAUCCCAAGUGCAAUGGAUAAGGCUCA 108 Query 171 -UGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | || | ||||| ||||| |||| |||||||||| Sbjct 109 CCCUGGGGAAAUCACCUUCGUGAUCAUGGUAUCUCCCCUGCCAGGUAAGU 158 >> URS0000386043_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e-1 Identity: 66.30% Query coverage: 40.72% Gaps: 2.17% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA--CUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 | ||||||| |||| |||| |||||||||| ||||| ||||||| ||||||| || | | || | ||||||| Sbjct 10 UCUCGAACGCAGUCCCCUACUACUACAAAUUAUGCAGUCCAGUUUCUCCCAUUUGGGGAAAUCGCAGGGGUCAGCACAUCUGGAGUGCAA 99 Query 158 UG 159 || Sbjct 100 UG 101 >> URS0002604F65_400727 Pomacea canaliculata (Apple snail) uncharacterized LOC112556437 E-value: 1.2e-1 Identity: 64.29% Query coverage: 54.75% Gaps: 11.90% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGG-GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUG 122 | ||||||||||| ||||| | |||||||||| |||||| || |||||| | || | || ||||| ||| Sbjct 994 ACAUUUUAAAUUU--------UGCAGGGGAUAGCGCGAACGCAGUCCCCCUUACGCAUAAAUUACGCACUCGAGUCACCCACAUUUG 1072 Query 123 GGGAGAUGGUAAA--CCAACGCGCUCACCAAGUGCAAUG 159 ||| ||| | | |||| ||| | | |||||||| Sbjct 1073 GGGUGAUCGCAGGGGUCAACCCGC--CCGAGGUGCAAUG 1109 >> URS0000CE483A_9598 Pan troglodytes (chimpanzee) retained intron E-value: 1.3e-1 Identity: 59.15% Query coverage: 71.49% Gaps: 4.88% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | || | | | Sbjct 34 GGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACAUCCGGA 124 Query 152 GUGCAAUG--UGAGCCAUUGAUGUAGGCCACG--GCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||||| |||||| | | | || | ||||| ||||| ||| ||||||||||| Sbjct 125 GUGCAAUCGAUGAGCC--UCACGCUGGGAAAAACCACCUUCGUGAUCAUGGUAUCUUCCCUGCCAGGUAAGUA 195 >> URS00023481D9_9606 Homo sapiens (human) HSALNT0314336 E-value: 1.4e-1 Identity: 62.28% Query coverage: 49.32% Gaps: 7.02% Alignment: Query 28 CAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGC--A-GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 |||||| ||| | | ||| | ||| | | ||| | || || || |||| ||||||||||||||| ||| | | || Sbjct 756 CAAGAGAUGCCAGUAUCU---CCCAGGAACUUGUCCCAGGGGAGAGUGCAAAUGCAGUUCCCCAUUACCACAAAUUAUGAAGUCGAGUUUC 843 Query 116 CCAC--UUGGGGAGAUGGUAAAC 136 |||| ||||||| || | | Sbjct 844 CCACCUUUGGGGAAAUUGCAGGG 866 >> URS000057882D_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.4e-1 Identity: 60.65% Query coverage: 67.87% Gaps: 3.87% Alignment: Query 70 GCGCGAACGCGUA--CCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGC 155 || ||| || ||||| ||| ||||||||||| ||| | | ||| || ||||||| || | | | || | | ||||| Sbjct 10 GCUUGAAUGCACUCCCCCCCACUAUCACAAAUUAUGCAGUCGAGUUUCCAGCAUUUGGGGAAAUUGCAGGGUCA-GCACAUCCAGAGUGC 98 Query 156 AAUGUGAG-CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 |||| | | | | | | || | ||| ||||||| |||| |||||||||| Sbjct 99 AAUGGGUGGGCCUCGCCCUGGGAAAACCACCUACUUGAUCAUGGUAUCUCCCCUGCCAGGUAAGU 163 >> URS00019A2A7C_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.7e-1 Identity: 57.50% Query coverage: 71.95% Gaps: 10.00% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA-CUUGGGGAGAUGGUAAACCAACGCGCUCACC 149 || ||| |||| | ||| |||||||| | || |||||| | |||| | ||| | || | | || Sbjct 9 GCUGGGCCCGCA------------UUCCAUACAACAAAUUACAAGGUAGGCUCUCCUAGCUUGAGAAGACCUUGGGGCAUCCCU-CCAAG 85 Query 150 AAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 || ||||||| | || | | | || | |||| |||||| | | ||||||||||||| ||| Sbjct 86 AAUUGCAAUGCAGGACAGUU--CUGGAUCAUGACCCUCAUUGAUCACUCAUACACCCCGUCCAGGUGAGU 153 >> URS0000B2212D_9598 Pan troglodytes long non-coding RNA NONPTRT008781.1 E-value: 1.8e-1 Identity: 61.65% Query coverage: 58.37% Gaps: 3.76% Alignment: Query 69 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 ||||||||| ||||| ||||||||||||||| | | | |||||| ||||||| || | | || | || ||| | | Sbjct 413 AGCGCGAACGUAGUCCCCCACUACCACAAAUUAUGCAAUUGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUACAGAGUACUA 503 Query 158 UG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGC 197 || | || | | | | || | ||||| |||||| Sbjct 504 UGGAUAAG-CCUCGCCCUGGGAAAAACACCUUCGUGAUCGCG 544 >> URS00019A2998_85681 Citrus clementina U1 spliceosomal RNA E-value: 1.9e-1 Identity: 58.02% Query coverage: 72.85% Gaps: 9.88% Alignment: Query 59 UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA-CUUGGGGAGAUGGUAAACCAACGCGCUCA 147 |||| ||| || || | ||| |||||||| | || |||||| | |||| | ||| | || | | || Sbjct 8 UGGCUGGGCCC----------AUA--UUCCAUACAACAAAUUACAAGGUAGGCUCUCCUAGCUUGAGAAGACCUUGGGGCAUCCCU-CCA 84 Query 148 CCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 || ||||||| | || | | | || | |||| |||||| | | ||||||||||||| ||| Sbjct 85 AGAAUUGCAAUGCAGGACAGUU--CUGGAUCAUGACCCUCAUUGAUCACUCAUACACCCCGUCCAGGUGAGU 154 >> URS0000CD4AA9_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 2.1e-1 Identity: 63.89% Query coverage: 47.96% Gaps: 1.85% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | Sbjct 230 UGUAAUUCAUGGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAG 320 Query 142 CGCUCACCAAGUGCAAU 158 | | | |||||||| Sbjct 321 CACAUCCGGAGUGCAAU 337 >> URS0000CEB978_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 2.1e-1 Identity: 63.89% Query coverage: 47.96% Gaps: 1.85% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | Sbjct 235 UGUAAUUCAUGGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAG 325 Query 142 CGCUCACCAAGUGCAAU 158 | | | |||||||| Sbjct 326 CACAUCCGGAGUGCAAU 342 >> URS0000D03FBA_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 2.1e-1 Identity: 63.89% Query coverage: 47.96% Gaps: 1.85% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | Sbjct 149 UGUAAUUCAUGGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAG 239 Query 142 CGCUCACCAAGUGCAAU 158 | | | |||||||| Sbjct 240 CACAUCCGGAGUGCAAU 256 >> URS0000D18CFD_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 2.1e-1 Identity: 63.89% Query coverage: 47.96% Gaps: 1.85% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | | Sbjct 399 UGUAAUUCAUGGGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAG 489 Query 142 CGCUCACCAAGUGCAAU 158 | | | |||||||| Sbjct 490 CACAUCCGGAGUGCAAU 506 >> URS000283FBCE_543639 Dermacentor silvarum (Tick) uncharacterized LOC125945587 E-value: 2.2e-1 Identity: 59.07% Query coverage: 84.16% Gaps: 6.22% Alignment: Query 35 GACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU--CCCA-CU 120 || | ||| ||| ||||| | ||| |||||||||| ||||| |||||| ||||| | | || ||| |||| | Sbjct 334 GAUCUUUCUUUGGAUUC-AGUAAUGGAGGGGGAUAGCGCGAACGCAGUCCCCCACUACCAAAAAUUGC-AUGCCCCAUCUGCCCCAGUU 420 Query 121 UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU--GAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCC 207 ||||| ||| | || | | ||||||||| | ||| | || ||| ||| ||||| || | ||| Sbjct 421 UGGGGUAGUGGCAGGGGUCAGCACGAGCGCAGUGCAAUGCCCGCGCCUCUCCCUGGGGACACCGCCUA-GCUGAUCA--CGGUAAUCCC 506 Query 208 G--UCCAGGUAAGUA 220 | ||||||||||| Sbjct 507 GGCACCAGGUAAGUA 521 >> URS00027F4E28_9793 Equus asinus (ass) lncRNA (ENSEASG00005027562.1) E-value: 2.3e-1 Identity: 68.13% Query coverage: 40.27% Gaps: 2.20% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU 160 |||||||| ||||| ||||||||||||||| ||| | | |||||| ||||||| || | | || | | |||||| || Sbjct 1 GCGAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCGGAGUGCAGUGG 91 >> URS0000D5CB05_9606 Homo sapiens (human) non-protein coding lnc-ZSCAN10-1:4 E-value: 2.5e-1 Identity: 62.63% Query coverage: 43.44% Gaps: 10.10% Alignment: Query 61 GCAGGGGC-CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCAC 148 |||||| | ||| || ||||| ||||||||||||||| | | | | |||| ||||||||| || || | | ||| Sbjct 809 UCAGGGGAAGGUAUGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGGCGAGUGUCCCACACUUGGGGAAAU-------CACAGGGGUCAG 892 Query 149 CAAGUGCA 156 || | | Sbjct 893 CACAUCCG 900 >> URS0000D3ED24_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.5e-1 Identity: 62.07% Query coverage: 50.68% Gaps: 3.45% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | Sbjct 208 UGUAAUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAG 298 Query 142 CGCUCACCAAGUGCAAUG--UGAGC 164 | | | |||||||| ||||| Sbjct 299 CACAUCCGGAGUGCAAUCGAUGAGC 323 >> URS00019B0615_9995 Marmota monax (woodchuck) non-coding RNA E-value: 2.7e-1 Identity: 60.00% Query coverage: 70.59% Gaps: 3.75% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||| ||||||||||| | || |||||||||| ||| | | | |||||| | ||||| || | | || | ||| Sbjct 952 GGGAGCGCGCGAACGCA-AUCCUUACUACCACAAACCAUGCAGCCUUGUUUCCCACAUUCGGGGAAAUCGCAGGGGUCAGCACCUCCCA 1039 Query 151 AGUGCAAUGUGA--GCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 ||||||||| | ||| || | || | || | |||||| || | |||||||||| Sbjct 1040 AGUGCAAUGGAAAAGCC-GUGCCCUGGGAAAACCAUCUACGUGAUCGUGGUGUUUCCGCUGCCAGGUAAGU 1109 >> URS00019A2677_85681 Citrus clementina U1 spliceosomal RNA E-value: 2.8e-1 Identity: 61.64% Query coverage: 71.49% Gaps: 4.40% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||| | ||||||||||| |||| | ||||||||| || || |||||| ||| |||| | || || | || || Sbjct 2 CAGAGCUCGCGCGAACGCAGGCCCCA--UGUCACAAAUUACGAAGUAGGCUCUCCUUGCUUAGGGAAACCUUAGGGCAGUCC-UCCAACA 88 Query 151 AGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 ||||||||| | || | | | |||| || |||||| | || | | || |||||||| Sbjct 89 AGUGCAAUGCUGGACA--GCCCAAAGACACGAGACUCAUUGAUCACUUAUUGAAC-CAUCUAGGUAAGU 154 >> URS0000316A05_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.9e-1 Identity: 58.60% Query coverage: 69.68% Gaps: 1.91% Alignment: Query 68 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGC 155 || ||||| ||||| ||||||||||||||| || | | |||| | ||||||| || | | | | | ||||| Sbjct 8 GAGCAUGAACGAAGUCCCCCACUACCACAAAUUAUGCAGUUGAGUUUCCCGAAUUUGGGGAAAUCGCAGAGGUCAGUAUAUCCGGAGUGC 97 Query 156 AAUG-UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 || | | | | | | || | ||||| ||||| |||| |||||||||||| Sbjct 98 AAAGGAUAAGCCUCGCCCUGGGAAAACCACCUUCGUGAUCAUAGUAUCUCCCCUGCCAGGUAAGUAU 164 >> URS0002337578_9606 Homo sapiens (human) HSALNT0368721 E-value: 3.5e-1 Identity: 57.32% Query coverage: 67.42% Gaps: 8.28% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA----- 150 || || ||| || ||||| ||||||||||| ||| ||| | | || ||||| || | ||| || | | ||| || Sbjct 279 GGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGG-----AAAUCACAGGGGUCAGCACACCC 364 Query 151 --AGUGCAAUGUG-AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAG 213 ||||||||| | | | | | || | ||||| ||||| |||| |||| Sbjct 365 AGAGUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUCAUGUUAUCUCCCCUGCCAG 430 >> URS00023DAA4B_3847 Glycine max (soybean) long non-coding RNA (GMAX_LNC001854) E-value: 5e-20 Identity: 72.58% Query coverage: 84.16% Gaps: 1.61% Alignment: Query 36 ACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 122 || ||||||||| || | || | || ||||||||||||| | ||| ||||||||||||||||||| |||| ||||||| Sbjct 81393 ACAAAAUUUUAAGUUGCAUUGAUAG---GGAGCCGCGCGAACGCAGGCUCCCACUACCACAAAUUAUGACGUAGGCUCUGCCACUUG 81476 Query 123 GGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGU 209 || ||| || | | | | | |||||||||| || || | ||||||| | ||||||||||| || | |||||||| Sbjct 81477 GGCAGACCUUAGGAAAGCACCCCUCCAAAGUGCAAUGGAAGUCACUUCCCUAGGCCAUAGACCUUCUUGAUCAUCCAUUGACCCCGU 81563 Query 210 CCAGGUAAGUAU 221 |||||||||||| Sbjct 81564 CCAGGUAAGUAU 81575 >> URS00023A9556_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC007477) E-value: 2.8e-14 Identity: 80.33% Query coverage: 55.20% Gaps: 0.00% Alignment: Query 92 CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCC 178 |||||||||| || ||||||||||| ||||| | ||||| || |||||| | | |||||| |||||||| |||| | || |||||| Sbjct 51471 CCACAAAUUACGAGGUCCACUCUCCUACUUGUGAAGAUGAUAGACCAACACACCCACCAAAUGCAAUGUAGGCCACUCAUCUAGGCC 51557 Query 179 ACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAG 213 | || ||||| |||||| || || ||| ||||| | Sbjct 51558 AUGGGCCUUCAUGAUCGCCCAUCAACCUCGUCCGG 51592 >> URS0002607790_34632 Rhipicephalus sanguineus (Brown dog tick) uncharacterized LOC119374492 E-value: 3.7e-1 Identity: 61.02% Query coverage: 51.13% Gaps: 5.08% Alignment: Query 48 AUUUAGGUAAUUGGCAGGGG---CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGGAGAUGGU 132 ||| | | | ||| | ||| ||||| |||| || |||| |||||| |||||| |||| | || ||||||||| ||| Sbjct 58 CUUUCGAUUAGUGGAAAGGGGGCUGGCGCGUACGCCUAGCCCCACUACCAAAAAUUACAUGCUCCAGCUACCCCGACUUGGGGAAGUGGC 147 Query 133 AAACCAACGCGCUCACCAAGUGCAAUGU 160 | || | ||||||||| Sbjct 148 GUGCUUCAGCCA-GCCGCAGUGCAAUGG 174 >> URS0002866797_9913 Bos taurus (cattle) lncRNA (ENSBTAG00000061774.1) E-value: 4e-1 Identity: 62.73% Query coverage: 47.96% Gaps: 4.55% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 || || |||||| || | |||| |||||||||| | | | | ||||| ||||||| |||| | || | | ||| Sbjct 130 AGGAAGCAUGAACGCAGUUCCUCCCUACUACAAAUUAUGCAGCCGAGUUCCCCACGUUUGGGGAAAUGGCAGGGGUCAGCACACCUGGAGU 220 Query 154 GCAAUG--UGAGCCAUUGA 170 |||||| |||||| || Sbjct 221 GCAAUGGAUGAGCCU-UGC 238 >> URS000233B76A_9606 Homo sapiens (human) HSALNT0314334 E-value: 4.2e-1 Identity: 68.06% Query coverage: 31.67% Gaps: 2.78% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAA 135 | | || || || |||| ||||||||||||||| ||| | | |||||| ||||||| || | | Sbjct 232 GAGAGUGCAAAUGCAGUUCCCCAUUACCACAAAUUAUGAAGUCGAGUUUCCCACCUUUGGGGAAAUUGCAGG 303 >> URS0000B2628A_9598 Pan troglodytes long non-coding RNA NONPTRT016409.1 E-value: 4.8e-1 Identity: 62.04% Query coverage: 47.96% Gaps: 1.85% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | Sbjct 760 UGUAAUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAG 850 Query 142 CGCUCACCAAGUGCAAU 158 | | | |||||||| Sbjct 851 CACAUCCGGAGUGCAAU 867 >> URS0000CD35B6_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 4.8e-1 Identity: 62.04% Query coverage: 47.96% Gaps: 1.85% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | Sbjct 385 UGUAAUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAG 475 Query 142 CGCUCACCAAGUGCAAU 158 | | | |||||||| Sbjct 476 CACAUCCGGAGUGCAAU 492 >> URS0000CE8733_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 4.8e-1 Identity: 62.04% Query coverage: 47.96% Gaps: 1.85% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | Sbjct 230 UGUAAUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAG 320 Query 142 CGCUCACCAAGUGCAAU 158 | | | |||||||| Sbjct 321 CACAUCCGGAGUGCAAU 337 >> URS0000D07B05_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 4.8e-1 Identity: 62.04% Query coverage: 47.96% Gaps: 1.85% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | Sbjct 149 UGUAAUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAG 239 Query 142 CGCUCACCAAGUGCAAU 158 | | | |||||||| Sbjct 240 CACAUCCGGAGUGCAAU 256 >> URS0000D495C1_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 4.8e-1 Identity: 62.04% Query coverage: 47.96% Gaps: 1.85% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 |||||| ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | | Sbjct 235 UGUAAUUCAUGGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAG 325 Query 142 CGCUCACCAAGUGCAAU 158 | | | |||||||| Sbjct 326 CACAUCCGGAGUGCAAU 342 >> URS0002335A7C_9606 Homo sapiens (human) HSALNT0368720 E-value: 5.4e-1 Identity: 59.71% Query coverage: 59.28% Gaps: 9.35% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA---- 150 ||| || ||| || ||||| ||||||||||| ||| ||| | | || ||||| || | ||| || | | ||| || Sbjct 279 GGGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGG-----AAAUCACAGGGGUCAGCACACC 364 Query 151 ---AGUGCAAUGUG-AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||||||||| | | | | | || | ||||| ||||| Sbjct 365 CAGAGUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUC 412 >> URS000233EA0F_9606 Homo sapiens (human) HSALNT0368723 E-value: 5.4e-1 Identity: 59.71% Query coverage: 59.28% Gaps: 9.35% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA---- 150 ||| || ||| || ||||| ||||||||||| ||| ||| | | || ||||| || | ||| || | | ||| || Sbjct 260 GGGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGG-----AAAUCACAGGGGUCAGCACACC 345 Query 151 ---AGUGCAAUGUG-AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||||||||| | | | | | || | ||||| ||||| Sbjct 346 CAGAGUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUC 393 >> URS0000EAC4C2_9606 Homo sapiens (human) HSALNT0190414 E-value: 5.6e-1 Identity: 59.42% Query coverage: 58.82% Gaps: 9.42% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA----- 150 || || ||| || ||||| ||||||||||| ||| ||| | | || ||||| || | ||| || | | ||| || Sbjct 339 GGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGG-----AAAUCACAGGGGUCAGCACACCC 424 Query 151 --AGUGCAAUGUG-AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||||||||| | | | | | || | ||||| ||||| Sbjct 425 AGAGUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUC 471 >> URS0002338877_9606 Homo sapiens (human) HSALNT0368719 E-value: 5.6e-1 Identity: 59.42% Query coverage: 58.82% Gaps: 9.42% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA----- 150 || || ||| || ||||| ||||||||||| ||| ||| | | || ||||| || | ||| || | | ||| || Sbjct 280 GGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGG-----AAAUCACAGGGGUCAGCACACCC 365 Query 151 --AGUGCAAUGUG-AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||||||||| | | | | | || | ||||| ||||| Sbjct 366 AGAGUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUC 412 >> URS00023435B9_9606 Homo sapiens (human) HSALNT0368722 E-value: 5.6e-1 Identity: 59.42% Query coverage: 58.82% Gaps: 9.42% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA----- 150 || || ||| || ||||| ||||||||||| ||| ||| | | || ||||| || | ||| || | | ||| || Sbjct 261 GGAAAGCAUGAAUGCAGUCCCCCACUACCACAAAUCAUGCAGUCGAGUUUCGCACUUUUGGGG-----AAAUCACAGGGGUCAGCACACCC 346 Query 151 --AGUGCAAUGUG-AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||||||||| | | | | | || | ||||| ||||| Sbjct 347 AGAGUGCAAUGGAUAAACCUCGCCCUGGGAAAACCACCUUCGUGAUC 393 >> URS00000AA521_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 6e-1 Identity: 59.26% Query coverage: 48.87% Gaps: 6.48% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | ||| || | Sbjct 33 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGGGUCAGCACAU 118 Query 154 GCAAUGUGAGCCAUUGA 170 | | || || || Sbjct 119 CCGG--AGUGCAAUCGA 133 >> URS00003223E6_9606 Homo sapiens (human) WEE2 antisense RNA 1 (ENSG00000261994.5) E-value: 6e-1 Identity: 59.26% Query coverage: 48.87% Gaps: 6.48% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | ||| || | Sbjct 149 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGGGUCAGCACAU 234 Query 154 GCAAUGUGAGCCAUUGA 170 | | || || || Sbjct 235 CCGG--AGUGCAAUCGA 249 >> URS000049A716_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 6e-1 Identity: 59.26% Query coverage: 48.87% Gaps: 6.48% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | ||| || | Sbjct 23 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGGGUCAGCACAU 108 Query 154 GCAAUGUGAGCCAUUGA 170 | | || || || Sbjct 109 CCGG--AGUGCAAUCGA 123 >> URS0000D5BEBB_9606 Homo sapiens (human) non-protein coding WEE2-AS1:17 E-value: 6e-1 Identity: 59.26% Query coverage: 48.87% Gaps: 6.48% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | ||| || | Sbjct 33 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGGGUCAGCACAU 118 Query 154 GCAAUGUGAGCCAUUGA 170 | | || || || Sbjct 119 CCGG--AGUGCAAUCGA 133 >> URS0000D5CDF1_9606 Homo sapiens (human) non-protein coding WEE2-AS1:19 E-value: 6e-1 Identity: 59.26% Query coverage: 48.87% Gaps: 6.48% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | ||| || | Sbjct 33 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGGGUCAGCACAU 118 Query 154 GCAAUGUGAGCCAUUGA 170 | | || || || Sbjct 119 CCGG--AGUGCAAUCGA 133 >> URS0000EED751_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 6e-1 Identity: 59.26% Query coverage: 48.87% Gaps: 6.48% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | ||| || | Sbjct 149 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGGGUCAGCACAU 234 Query 154 GCAAUGUGAGCCAUUGA 170 | | || || || Sbjct 235 CCGG--AGUGCAAUCGA 249 >> URS0000EEFC60_9606 Homo sapiens (human) WEE2 antisense RNA 1 E-value: 6.2e-1 Identity: 59.26% Query coverage: 48.87% Gaps: 6.48% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 ||| ||||||| || ||||| |||| |||||||||| ||| | | | |||| | || | | || | | ||| || | Sbjct 33 GGGGAAAGCGCGAAUGCAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGA-----AUAUCACAGGGGUCAGCACAU 118 Query 154 GCAAUGUGAGCCAUUGA 170 | | || || || Sbjct 119 CCGG--AGUGCAAUCGA 133 >> URS00019CA8FE_506608 Cinara cedri non-coding RNA E-value: 6.5e-1 Identity: 59.28% Query coverage: 81.45% Gaps: 12.89% Alignment: Query 41 AUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGA 128 || |||| | | | ||| |||| | |||||||||| ||| |||||| |||||||| | | |||| || |||| | Sbjct 75 AUAUUAAGCUCAUUUCAUUAUAAGGGACGGCGCGAACGCAGU-CCCAGCUACCAAAAAUUAUGCGUCCGAGGUAUCCACAUUAGGGAUA 162 Query 129 U-------GGUAAACCAACGCGCUCACCAAGUGCAAUGUGAG--CCAUUG--AUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 ||| |||| | | | |||||||| | || | | || ||| || ||| |||||| | || |||| Sbjct 163 CUCGCAGGGGUCAACCCAGUC------GAUGUGCAAUGACCGGGCC-UCGCCCUGGAGGAACCG--CCUAUUUGAUCA-CGGUUGACCU 241 Query 207 C--GUCCAGGUAAGUA 220 | ||||||||||| Sbjct 242 CCACGCCAGGUAAGUA 257 >> URS00028678AD_9913 Bos taurus (cattle) lncRNA (ENSBTAG00000061774.1) E-value: 6.6e-1 Identity: 63.21% Query coverage: 46.15% Gaps: 3.77% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 || || |||||| || | |||| |||||||||| | | | | ||||| ||||||| |||| | || | | ||| Sbjct 783 AGGAAGCAUGAACGCAGUUCCUCCCUACUACAAAUUAUGCAGCCGAGUUCCCCACGUUUGGGGAAAUGGCAGGGGUCAGCACACCUGGAGU 873 Query 154 GCAAUG--UGAGCCA 166 |||||| |||||| Sbjct 874 GCAAUGGAUGAGCCU 888 >> URS00004AF9B7_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.9e-1 Identity: 70.97% Query coverage: 40.72% Gaps: 6.45% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCA-AGUGCA 156 || | ||||| ||||| ||||||||||||||| ||| | | |||| | ||||||| || | | | | || || || |||||| Sbjct 8 GCUCUAACGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUCCCUCAUUUGGGGAAAUCGAAGAGGCA---GCACAGCACAGUGCA 94 Query 157 AUG 159 ||| Sbjct 95 AUG 97 >> URS00000DD985_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.2e-1 Identity: 65.52% Query coverage: 52.04% Gaps: 4.31% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA-CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAU 158 || |||| || ||||| ||||||||||||||| ||| | | ||||| ||||||| | || | | || || | || | || Sbjct 8 GCUUGAACAAGU-CCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCAAAUUGGGGAAACGGGCAG--AGUCAGCACAUCUGGUUCCAU 94 Query 159 GUGAGCCAUUGAUGUAGGCCACGGCC 184 || || | ||| | |||| | || Sbjct 95 GUCAGUU-UGCAUGGAAGCCAUGUCC 119 >> URS000000AA84_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.6e-1 Identity: 54.60% Query coverage: 70.14% Gaps: 7.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUG 154 || | || || || || || |||||||||||||| || | | |||||| | ||||| | | | | || | || Sbjct 3 GGAGAGUGCAAAUGCAGCCCUCCACUACCACAAAUUAUACAGUUGAAUUUCCCACAUUUGGAGAAGUUGCAG-----GGGCCAGUACAUG 87 Query 155 CAAUGUGAGCCA--------UUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 || ||||| ||| | || | |||||||||| |||| ||||||||| Sbjct 88 CAGAGUGAGAUGAAUAAGUCUUGCCUUGGGAAAACCAUCUUCUUGAUCACAGUAUCUCCCCUGCCAGGUAAGA 160 >> URS00027F1611_10181 Heterocephalus glaber (naked mole-rat) lncRNA (ENSHGLG00000049152.1, ENSHGLG00100036277.1) E-value: 8.1e-1 Identity: 61.62% Query coverage: 43.89% Gaps: 2.02% Alignment: Query 69 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 | || || || ||||| |||||||||| |||| || | |||| | ||||||| || ||| | || | | |||||| Sbjct 182 CACGAAAAUGCAGUCCCCCACUACCACAAAGUAUGCAGUUGAGCUUCCCACAUUUGGGGAAAUCGUAGAGGUCAGCACAUCCAGAGUGCA 271 Query 157 AUGUGAGCC 165 ||| | Sbjct 272 AUGGAGGAG 280 >> URS00009B291E_10090 Mus musculus long non-coding RNA NONMMUT062701.2 E-value: 8.9e-1 Identity: 64.49% Query coverage: 44.34% Gaps: 14.95% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACC 149 ||||| | |||||| | |||| ||||||||||||||| ||||| | ||| || ||||| | || | | | | ||| | Sbjct 191 CAGGGAAAGUGCGAACACAGUACCCCACUACCACAAAUUAUGCAGUCCAGUUUCCUGCAUUUGGGAAAAUCGCA-------GGGGUCAGC 273 Query 150 A-------AGUGCAAUG 159 | ||||||||| Sbjct 274 AUAUCCACAGUGCAAUG 290 >> URS00028690F0_9913 Bos taurus (cattle) lncRNA (ENSBTAG00000061774.1) E-value: 9e-1 Identity: 63.21% Query coverage: 46.15% Gaps: 3.77% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 || || |||||| || | |||| |||||||||| | | | | ||||| ||||||| |||| | || | | ||| Sbjct 151 AGGAAGCAUGAACGCAGUUCCUCCCUACUACAAAUUAUGCAGCCGAGUUCCCCACGUUUGGGGAAAUGGCAGGGGUCAGCACACCUGGAGU 241 Query 154 GCAAUG--UGAGCCA 166 |||||| |||||| Sbjct 242 GCAAUGGAUGAGCCU 256 >> URS000236233B_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC008982) E-value: 1.1e-19 Identity: 71.58% Query coverage: 82.81% Gaps: 1.64% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 125 ||||| | || ||| | || ||||| ||||||||||| |||||||| ||||||| |||||||| |||| ||||||||| Sbjct 81462 AAAUUGAACAU---UGUAUUGGGUAGGGGACGCGCGAACGCAGGCCCCCUCUGCCACAAAAUAUGACGUAGACUCGGCCACUUGGGC 81545 Query 126 AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 || || | | | | |||||||||| | || |||| || || ||||||||||||||| | ||||||||||| Sbjct 81546 CGACCUUAGGCAGGCAUCCCUCCAAAGUGCAAUGGAGGUCACCAGCCUAGGUCAUGGACCUUCUUGAUCGGCCAUUGACCCCGUCCA 81632 Query 213 GGUAAGUAU 221 ||||||||| Sbjct 81633 GGUAAGUAU 81641 >> URS00027E6FA3_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015037676.1) E-value: 9.9e-1 Identity: 65.31% Query coverage: 43.44% Gaps: 2.04% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACC 149 ||| | ||| ||| || ||||| ||||| | ||||||| ||| | | ||| || ||||||| || | | || | | Sbjct 1017 GGGACAGCGAGAAUGCAGUCCCCCACUACCCCGAAUUAUGCAGUCUAGUUUCCUGCAGUUGGGGAAAUCGCAGGGGUCAGCACAUCCA 1104 Query 150 AAGUGCAAUG 159 ||||||||| Sbjct 1105 GAGUGCAAUG 1114 >> URS00003326F3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e+0 Identity: 60.26% Query coverage: 66.52% Gaps: 5.30% Alignment: Query 73 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG- 159 ||| || || ||| ||||||||||||||| ||| | | |||||| ||||||| || | | || | | ||||||||| Sbjct 13 UGAAUGCAGAC-CCCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGUUUAGCACAUCCAGAGUGCAAUGG 101 Query 160 -UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | |||| || || | | | | ||||| |||| |||| ||||| Sbjct 102 AUAAGCCUCGCCUG--GG-AAAACCACCUUGUGAUCAUGGAAUCUCCCCUGCCAGCUAAGU 159 >> URS00005DA835_28829 Solea senegalensis (Senegalese sole) U1 snRNA E-value: 1.1e+0 Identity: 61.15% Query coverage: 68.78% Gaps: 5.73% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAA--CCAACGCGCUCACCAA 151 | |||||| ||| |||| ||| || |||||||| ||| | |||||| ||||||| | | | |||| | | | Sbjct 6 GAAAGCGCGACCGCAGCACCCCACUAGCAAAAAUUAUGCAGUCAAGAUUCCCACGUUUGGGGAAUUUGCAGGGGUCAACA--CAGCCGGA 93 Query 152 GUGCAAUG-UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAA 217 |||||||| |||||| | | || | | |||||||||| |||| |||||||| Sbjct 94 GUGCAAUGGUGAGCCU-CGCCCUGGGUGA-ACCGCUUCUUGAUCAUGGUAUCUCCCCUGCCAGGUAA 158 >> URS00025E3C68_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000092425.1) E-value: 1.2e+0 Identity: 60.45% Query coverage: 59.28% Gaps: 2.24% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 ||| ||| | |||| ||||| |||||||||| |||| ||| | |||||| ||||||| | | | || | || Sbjct 572 GGGAGAGCGUGGACGCAGUCCCCCACUACCACAAACUAUGCAGUCGAGAUUCCCACAUUUGGGGAAUUCGCAGGGGUCAGCAUGGCCGGAG 662 Query 153 UGCAAUGUGAGCCA-UUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||| ||| | | | | | ||||| | ||||| || || Sbjct 663 UGCGAUGGGCGAGACUCGCCGUAGGUGAACCUCCUUCGUGGUC 705 >> URS0000052627_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.2e+0 Identity: 56.79% Query coverage: 68.78% Gaps: 9.88% Alignment: Query 69 CGCGCGAACGC-GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA--UGGUAAACCAACGCGCUCACCAAGUGC 155 || | ||||| || ||||| ||||||||||||||| ||| | | |||| | ||||| || | || | ||||| Sbjct 9 AGCACAAACGCAGUCCCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCUUAAGUGGAGAAACGGCAGGGGUCAGCACAUCUGGAGUGC 98 Query 156 AAUGUGAGCCAUUGAUGUAGGCCACGG-------CCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||| | | ||| || || |||| ||||| | || ||||||||||| Sbjct 99 AAUGAAUG-----AGUCUAGCCCU-GGAAACACCUCCUUAGUGAUCAUGGUAUCUCUCCUGCCAGGUAAGUA 164 >> URS00002BC911_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.2e+0 Identity: 59.76% Query coverage: 69.68% Gaps: 14.02% Alignment: Query 67 GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUG 154 || | || || | ||||| ||||||| ||||||| ||| | | | | || || |||| || || | ||| | Sbjct 7 AGAGCUCAAAGGCAUUCCCCCACUACCACUAAUUAUGCAGUCAAGUUUGCUGCAUUUAGGGAAAU-------CACAUGGGUCA----GAA 85 Query 155 CAAUGUGA--GCCAUUGAUGUAGGCCACGG------CCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || || || || |||||| | ||| || ||||| ||||| | |||| |||||||||||| Sbjct 86 CAUUGGGAAUGCAAUUGAU--AAGCCCUGGGAAAACACCUUCAUGAUCAUAGUACCACCCAUUCCAGGUAAGUA 157 >> URS00004637B1_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.2e+0 Identity: 57.14% Query coverage: 68.33% Gaps: 10.56% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG 159 || ||| | ||||| |||||||||||||| ||| || ||||| | || || || || | | ||| || || || | Sbjct 10 GCAUGAAUGUAGGCCCCCAUUACCACAAAUUAUGCAGUCAGCUUUCCCAUAUUUGGG---GGAAAUCCCA--GGGUCAGCAUGUCCAGAG 94 Query 160 UGAGCCAUUGAUG----------UAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | || || ||| | || | ||||| ||||| |||| |||||||| || Sbjct 95 U--GCAAUGGAUAAGCCUCACCCUGGGAAAACCACCUUCAUGAUCAUGGUAUCUCCCCUGCCAGGUAAAUA 163 >> URS00023D9766_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC008447) E-value: 9.3e-32 Identity: 81.62% Query coverage: 83.71% Gaps: 1.08% Alignment: Query 37 CCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 123 |||| |||| | | | || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 46466 ACAAACUUUAUACAUUAG--UUUAGUAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCUGCUUGA 46550 Query 124 GGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUC 210 ||||||||||| || || | |||||||||||| |||| ||| ||||||| |||||||||||||||| | ||||||||| Sbjct 46551 GGAGAUGGUAAGCCCGUGCUCCUCCCAAGUGCAAUGGAGGCCACUGACUUAGGCCAUAACCCUUCUUGAUCGGCCAUAGACCCCGUC 46637 Query 211 CAGGUAAGUAU 221 ||||||||||| Sbjct 46638 CAGGUAAGUAU 46648 >> URS0000CD1F00_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 1.5e+0 Identity: 64.95% Query coverage: 42.99% Gaps: 2.06% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | || | | || Sbjct 34 GGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACAUCCGGAG 124 Query 153 UGCAAU 158 |||||| Sbjct 125 UGCAAU 130 >> URS0000CE052B_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 1.5e+0 Identity: 64.95% Query coverage: 42.99% Gaps: 2.06% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | || | | || Sbjct 150 GGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACAUCCGGAG 240 Query 153 UGCAAU 158 |||||| Sbjct 241 UGCAAU 246 >> URS0000D4BC95_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 1.5e+0 Identity: 64.95% Query coverage: 42.99% Gaps: 2.06% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 ||| || ||||| | ||||| |||| |||||||||| ||| | | | |||| ||||||| || | | || | | || Sbjct 24 GGGAAAGCACGAACACAGUCCCCCACUACAACAAAUUAUGCAGUCGAGUUUUCCACAUUUGGGGAUAUCGCAGGGGUCAGCACAUCCGGAG 114 Query 153 UGCAAU 158 |||||| Sbjct 115 UGCAAU 120 >> URS000009B22F_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.8e+0 Identity: 57.05% Query coverage: 69.23% Gaps: 3.21% Alignment: Query 68 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU---GGGGAGAUGGUAAACCAACGCGCUCACCAAGUG 154 | ||| | || ||||| ||||||||||||||| | | | |||||| | ||||| || ||| || | | |||| Sbjct 8 C--CGCCAUUGCAGUCCCCCACUACCACAAAUUAUGCAAUUGAGUUUCCCACAUUUGGGGGAAAUCGUAGGGGUCUGCUCAUCCAGAGUG 95 Query 155 CAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||| | | | | | || | ||||| || || | | || ||| ||||||| Sbjct 96 CAACGGAUAGCCUCGCCCUGGGAAAACCACCUUCAUGGUCAUGGUACCUCUCCUGCCAAGUAAGUA 161 >> URS000051B26D_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.8e+0 Identity: 63.43% Query coverage: 55.66% Gaps: 12.69% Alignment: Query 72 GCGAACGC-GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCA------CCAAG 152 | |||| | || ||||| ||||||||||||||| ||| | | |||| | ||||||| ||| | | | ||| |||| Sbjct 12 GAGAACACAGUCCCCCCACUACCACAAAUUAUGCUGUCAAAUUUCCCGCAUUUGGGGAA-----AAAUCUCAGAGGUCAGCACAUCCAAA 96 Query 153 UGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||||||| | ||| | | | || | ||||| ||||| Sbjct 97 UGCAAUGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGUGAUC 139 >> URS00000F6DA3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.8e+0 Identity: 66.00% Query coverage: 44.34% Gaps: 9.00% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 || | || |||| || ||||| ||||||||||||||| ||| | | ||| | |||||| |||||| | | ||| || Sbjct 4 GGAGUAGCACGAAUGCAGCCCCCCACUACCACAAAUUAUGCAGUCAAGUUUCCAGAAUUUGGGG-------AAACCAUAGGGAUCAACAC 86 Query 152 GUGCAAUGUG 161 | | ||||| Sbjct 87 AUACCAUGUG 96 >> URS000241968D_2711 Citrus sinensis (sweet orange) long non-coding RNA (CSIN_LNC001306) E-value: 3.8e-17 Identity: 71.89% Query coverage: 82.81% Gaps: 3.24% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCA-GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 124 ||| ||||| | || |||| | |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||| || Sbjct 61666 AAACUUUAACUAUA----CUUGGGAGGGGGCCGCGCGAACGCAGGCCCCCACUACCACAAAUUAUGACGUAGGCUCAGCCACUUUGG 61748 Query 125 G-AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUC 210 | || || | || | | |||||||||| |||| | ||||||| | |||| |||||| || | ||||||||| Sbjct 61749 GCUGACCUUAGGCGGGUGCACCUCCGAAGUGCAAUGGAGGCCACCAACCUAGGCCAUGAGCCUUAAUGAUCGCCCAUUGACCCCGUC 61835 Query 211 CAGGUAAGUAU 221 ||||||||||| Sbjct 61836 CAGGUAAGUAU 61846 >> URS0000CCE86B_10116 Rattus norvegicus uncharacterized LOC102548318 E-value: 2.1e+0 Identity: 57.50% Query coverage: 66.97% Gaps: 13.13% Alignment: Query 52 AGGUAAUUGGCAGGGG----CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU-CCCACUUGGGGAGAUGGUAAAC 136 ||| ||||| | | | | ||| || | ||| | |||||||||| || || || | || ||||||| | | Sbjct 321 CUAUAACUGGCAAGCGGGGCAAGGACAAACACGGCCUCCCAUCAUCACAAAUUAUACAGUGCAUUCAGCACAUUUGGGGAAA------CC 404 Query 137 CAACGCGCUCACCA------AGUGCAAUGUGA-GCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCG 199 | | ||| ||| || |||||| || |||||| | || || || |||| |||| | || Sbjct 405 ACAGGGGCUGACCCAGCCAGAGCGCAAUGAGAAACCAUUGUCCUGGGAAACUGC-CUUCGUGAUGG--CG 471 >> URS00019F2507_506608 Cinara cedri non-coding RNA E-value: 2.1e+0 Identity: 57.37% Query coverage: 79.64% Gaps: 13.16% Alignment: Query 45 UAAAUUUAGGUAAUUG-GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA-CUCUCCCACUUGGGGAGAU-- 129 | | || |||| ||||| | |||||||||| ||| |||||| |||||| | | | | | ||| || || | | Sbjct 133 UUAUCACAGUAUAUUGUUCAGGGACGGCGCGAACGCA--GUCCCGCUACCAAAAAUUACGUGUCCGAGAUAUUCCAAUUUGGAAUACUC 219 Query 130 -----GGUAAACCAACGCGCUCACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGU- 209 ||| |||| | | | |||||||| || | | || ||| || ||| ||||| | || |||| || Sbjct 220 GCAGGGGUCAACCGU------CCCGAUGUGCAAUGGGAAAGUCUCGUCCUGGAGGAACCG--CCUCGGUGAUC-ACGGUUGACCUCGAC 299 Query 210 -CCAGGUAAGUA 220 ||| ||||||| Sbjct 300 ACCAAGUAAGUA 311 >> URS000260874C_34632 Rhipicephalus sanguineus (Brown dog tick) uncharacterized LOC119399493 E-value: 2.1e+0 Identity: 62.39% Query coverage: 51.58% Gaps: 5.98% Alignment: Query 47 AAUUUAGGUAAUUGGCAGGGGCC-GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU--CCCACUUGGGGAGAUGGUA 133 |||||| || || |||||| ||||| |||| || |||| |||||| |||||| |||| || |||||| ||| Sbjct 40 AAUUUA---AAACGGAAGGGGCUGGCGCGUACGCCUAGCCCCACUACCAAAAAUUACAUGCCCCACCUACCCCGGUUUGGGGUAGUGGCG 126 Query 134 AACCAACGCGCUCACCAAGUGCAAUGU 160 | || | | | ||||||||| Sbjct 127 UGCUUCAGCCCAC-CGCAGUGCAAUGG 152 >> URS00019A29CF_85681 Citrus clementina U1 spliceosomal RNA E-value: 2.2e+0 Identity: 61.61% Query coverage: 50.68% Gaps: 1.79% Alignment: Query 108 CCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGC 197 ||||||||||||| ||||| | | | || |||||||||| | | | |||| || | |||| ||||| Sbjct 43 UCACUCUCCCACUUAAGGAGACCUUCGUGGCAGCCUUCCAAGAAGUGCAAUGGAGGG--UAGCCUUAGGACAUGAGCCUUAAUGAUCACU 130 Query 198 CGUCGACCCCGUCCAGGUAAGU 219 | | ||||| || |||||||| Sbjct 131 CAUUAACCCCAUCUAGGUAAGU 152 >> URS00019A2A37_85681 Citrus clementina U1 spliceosomal RNA E-value: 2.5e+0 Identity: 78.00% Query coverage: 22.62% Gaps: 0.00% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU 112 |||||||||||||||| |||| || |||||||||||| ||| || Sbjct 3 GGGGGCCGCGCGAACGCAGGCCCCUACUGCCACAAAUUAUGUCGUAUACA 52 >> URS0002802900_34620 Dermacentor andersoni (Rocky Mountain wood tick) uncharacterized LOC126529304 E-value: 2.7e+0 Identity: 62.10% Query coverage: 54.75% Gaps: 4.84% Alignment: Query 40 AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU--CCCA-CUUGGGGA 126 ||||| |||| | | | || ||| |||||||||| ||||| |||||| ||||| | | || ||| |||| |||||| Sbjct 6 GAUUUUUAAUUGAUAGAGUAGG--GGGAUAGCGCGAACGCAGUCCCCCACUACCAAAAAUUGC-AUGCCCCAUCUGCCCCAGUUUGGGGU 92 Query 127 GAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU 160 ||| | || | | ||||||||| Sbjct 93 AGUGGCAGGGGUCAGCACGAGCGCAGUGCAAUGC 126 >> URS000280F642_6087 Hydra vulgaris (Swiftwater hydra) uncharacterized LOC124805855, transcript variant X4 E-value: 2.7e+0 Identity: 59.87% Query coverage: 68.78% Gaps: 3.82% Alignment: Query 69 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 |||||||||| | || |||||| ||||||| ||| | | || || | | || || | | | || | |||||||| Sbjct 20 AGCGCGAACGCAGGCUUCCGCUACCAGAAAUUAUACUGUCGAGUUACCGACGUUAGCGGUAAUCGCAGAGGUCAGCCUAGUCGAAGUGCAA 110 Query 158 UG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCG-ACCCCGUCCAGGUAAGUA 220 || | |||| | | | | | | | |||| ||||| | | | ||| |||||||||| Sbjct 111 UGAAUAAGCC-UCACUCUGGAAGAAGCCGCUUCGUGAUCCGACUUAACUUCCCAGUCAGGUAAGUA 175 >> URS0000D107C4_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.8e+0 Identity: 62.24% Query coverage: 43.44% Gaps: 2.04% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | || | | | Sbjct 23 GGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACAUCCGGA 113 Query 152 GUGCAAU 158 ||||||| Sbjct 114 GUGCAAU 120 >> URS0000D148C5_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.8e+0 Identity: 62.24% Query coverage: 43.44% Gaps: 2.04% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | || | | | Sbjct 149 GGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACAUCCGGA 239 Query 152 GUGCAAU 158 ||||||| Sbjct 240 GUGCAAU 246 >> URS00001DE2C5_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.9e+0 Identity: 61.07% Query coverage: 62.90% Gaps: 12.08% Alignment: Query 82 ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA-------AGUGCAAUG--UGA 162 || || |||| |||||||||| ||| | | ||||| || ||| ||| || | | |||||| ||||||||| | | Sbjct 18 UCCUCCACUACUACAAAUUAUGUGGUCGAGUUUCCCAAUUUGGG------GAAAUCACAGGGGUCACCACAUCCGGAGUGCAAUGGAUAA 101 Query 163 GCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC-GGCCGUCGACCCCGUCCAGGUAAGUA 220 ||| | || | ||| ||||| | | || |||| | | ||||||||| Sbjct 102 GCCUC-ACCCUGGGAAAACCACCUAUGUGAUCAUGGCAUCUACCCUG-CUAGGUAAGUA 158 >> URS0000CCE54A_10116 Rattus norvegicus uncharacterized LOC103691943 E-value: 2.9e+0 Identity: 66.67% Query coverage: 38.91% Gaps: 6.67% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAA--CCAACGCGCUCACCAAGUGCAAUG 159 || ||| ||||| ||||||||||||||| ||| | ||| || ||||||| || | | |||| | | ||||||||| Sbjct 367 GAUCGCAGUCCCCCACUACCACAAAUUAUGCAGUCGCUUUUCCUGCAUUUGGGGAAAUCGCAGGGGUCAAC--ACAUCCGGAGUGCAAUG 454 >> URS0000CD96D0_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.9e+0 Identity: 62.24% Query coverage: 43.44% Gaps: 2.04% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 ||| ||| |||||| ||||| |||| || ||||||| ||| | | | |||| ||||| | || | || | | | Sbjct 33 GGGGAAAGCGUGAACGCAGUCCCCCACUACAACUAAUUAUGCAGUCGAGUUUUCCACAUUUGGGAAUAUCUCAGGGGUCAGCACAUCCGGA 123 Query 152 GUGCAAU 158 ||||||| Sbjct 124 GUGCAAU 130 >> URS0002376E1D_4155 Erythranthe guttata (spotted monkey flower) long non-coding RNA (EGUT_LNC000703) E-value: 4.3e-5 Identity: 53.80% Query coverage: 77.38% Gaps: 23.39% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCA 138 |||||| | |||| || ||||||||||| || |||||| | ||||||||||| | || | | Sbjct 6924 UUAGGUUUUACGCAGAGGUCGCGCGAACGCAGGCCUCCUCUAACCCAAAUUAUGACUUAGGUUCGACUA-------------------- 6992 Query 139 ACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || || | | || |||| || | || ||||| || | ||| ||||||||||||||| Sbjct 6993 --------------------GUUAGUCGCUAGCAUAAGCCAUGGACUUUAAUGAUCACCCAUUGACUCCGUCCAGGUAAGUA 7054 >> URS0002352336_66656 Durio zibethinus (D. zibethinus) long non-coding RNA (DZIB_LNC001488) E-value: 2.3e-21 Identity: 72.68% Query coverage: 87.78% Gaps: 1.03% Alignment: Query 27 ACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU 114 || |||| | | |||| ||| | || | | || | |||||||||||| |||| || |||||||||||||||| |||| Sbjct 8128 ACUAGAGAAAGAAUAUUUGAAACCAA--UAUUGUGUAGAGACCGCGCGAACGCAGGUCCCCGCUGCCACAAAUUAUGACGUAGGCUCU 8213 Query 115 CCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCG 202 |||||||||||||| || | || | | | |||||||||||| || || || || |||| || ||||||||||| || | Sbjct 8214 CCCACUUGGGGAGACCUUAGAGCAGCACCCCACCCAAGUGCAAUGGAAGUCACUGCCCUAAGCCAUGGGUCUUCUUGAUCGCCCAUUA 8301 Query 203 ACCCCGUCCAGGUAAGUA 220 |||||||||||||||||| Sbjct 8302 ACCCCGUCCAGGUAAGUA 8319 >> URS0002369BAB_66656 Durio zibethinus (D. zibethinus) long non-coding RNA (DZIB_LNC001489) E-value: 2.3e-18 Identity: 70.05% Query coverage: 84.62% Gaps: 1.60% Alignment: Query 35 GACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU 120 | | |||| ||| || | || |||| ||||||||| || ||||| || |||||||||||||||| || | ||||| Sbjct 10029 AAGAAUAUUUGAAACCA--AUAUUGGGUAGGGACCGCGCGAAUGCAGGCCCCCGCUGCCACAAAUUAUGACGUAGGCUUU-CCACU 10111 Query 121 UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 |||| ||| || | | | | | ||||||||||| || ||||| ||||||| || ||| |||||| || | ||||| Sbjct 10112 UGGGAAGACCUUAGAGCCGCACCCCUCCCAAGUGCAAUAGAAGUCAUUGCCCUAGGCCAUGGGUCUUAUUGAUCAUCCAUUGACCC 10197 Query 207 CGUCCAGGUAAGUAU 221 ||||||||||||| Sbjct 10198 UAUCCAGGUAAGUAU 10212 >> URS00023BE70B_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC010805) E-value: 3.5e+0 Identity: 56.17% Query coverage: 70.14% Gaps: 9.88% Alignment: Query 45 UAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUAC-CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUG 130 |||| || ||| | | || || | ||||||| | | | | |||||||||||| | || |||||||| | | Sbjct 13034 UAAACUU--UUAAAUAGUAGAGGUUGUGCGAACGUAUUAACGCUAUUGUAACAAAUUAUGACAUAAGUUCAAUCACUUGGGUAAA-- 13116 Query 131 GUAAACCAACGCGCUCACC------AAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCG 199 | ||| | ||| | ||| || ||| || | | ||||||| | ||| ||||| | | Sbjct 13117 ----UCUCACGUGGUCAUCCCAUAGAAGCGCGAUGA-AGUCGCUAGCCUAGGCCAUGAGUCUUAUUGAUAGCUCA 13186 >> URS0000E984F0_9606 Homo sapiens (human) HSALNT0122897 E-value: 3.7e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGA 170 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | ||| Sbjct 465 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CCUUGC 554 Query 171 UGUAGGCCACGGCCCUUCUUGAUC 194 | || | ||||| ||||| Sbjct 555 CCUGGGAAAACCACCUUCGUGAUC 578 >> URS0000E9A837_9606 Homo sapiens (human) HSALNT0122901 E-value: 3.7e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGA 170 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | ||| Sbjct 345 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CCUUGC 434 Query 171 UGUAGGCCACGGCCCUUCUUGAUC 194 | || | ||||| ||||| Sbjct 435 CCUGGGAAAACCACCUUCGUGAUC 458 >> URS0000EBB5F8_9606 Homo sapiens (human) HSALNT0122898 E-value: 3.7e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGA 170 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | ||| Sbjct 465 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CCUUGC 554 Query 171 UGUAGGCCACGGCCCUUCUUGAUC 194 | || | ||||| ||||| Sbjct 555 CCUGGGAAAACCACCUUCGUGAUC 578 >> URS000233AE5D_9606 Homo sapiens (human) HSALNT0340800 E-value: 3.7e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGA 170 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | ||| Sbjct 318 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CCUUGC 407 Query 171 UGUAGGCCACGGCCCUUCUUGAUC 194 | || | ||||| ||||| Sbjct 408 CCUGGGAAAACCACCUUCGUGAUC 431 >> URS000233F523_9606 Homo sapiens (human) HSALNT0340793 E-value: 3.7e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGA 170 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | ||| Sbjct 680 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CCUUGC 769 Query 171 UGUAGGCCACGGCCCUUCUUGAUC 194 | || | ||||| ||||| Sbjct 770 CCUGGGAAAACCACCUUCGUGAUC 793 >> URS000234161F_9606 Homo sapiens (human) HSALNT0340790 E-value: 3.7e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGA 170 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | ||| Sbjct 466 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CCUUGC 555 Query 171 UGUAGGCCACGGCCCUUCUUGAUC 194 | || | ||||| ||||| Sbjct 556 CCUGGGAAAACCACCUUCGUGAUC 579 >> URS000234209F_9606 Homo sapiens (human) HSALNT0340794 E-value: 3.7e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGA 170 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | ||| Sbjct 401 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CCUUGC 490 Query 171 UGUAGGCCACGGCCCUUCUUGAUC 194 | || | ||||| ||||| Sbjct 491 CCUGGGAAAACCACCUUCGUGAUC 514 >> URS0002342870_9606 Homo sapiens (human) HSALNT0340799 E-value: 3.7e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGA 170 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | ||| Sbjct 318 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CCUUGC 407 Query 171 UGUAGGCCACGGCCCUUCUUGAUC 194 | || | ||||| ||||| Sbjct 408 CCUGGGAAAACCACCUUCGUGAUC 431 >> URS0002344F25_9606 Homo sapiens (human) HSALNT0340797 E-value: 3.7e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGA 170 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | ||| Sbjct 442 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CCUUGC 531 Query 171 UGUAGGCCACGGCCCUUCUUGAUC 194 | || | ||||| ||||| Sbjct 532 CCUGGGAAAACCACCUUCGUGAUC 555 >> URS000010D92E_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.9e+0 Identity: 57.42% Query coverage: 68.78% Gaps: 1.94% Alignment: Query 69 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 | | |||| | ||| |||| |||||||||| || | | |||| | ||||||| || | || | | |||||| || Sbjct 7 AGUGUGAACAAAGUCUCCCACUACUACAAAUUAUGCACUCAAGUUUCCCGAAUUUGGGGAAAUCUCAGGGGUCAGCACACCCCAAGUACA 96 Query 157 AUGUGA-GCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||| | | | | | || | ||| ||||||| || | ||||||||| | Sbjct 97 AUGGAUGGGCCUCGCCCUGGGAAAACCACCUCCUUGAUCAUGGUAUCUCCGCUGCCAGGUAAGCA 161 >> URS00004E5C34_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.1e+0 Identity: 57.96% Query coverage: 69.23% Gaps: 8.28% Alignment: Query 68 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGC 155 || ||| || | | | |||| ||||||||||| | | | | |||||| ||||||| || | || || | ||| Sbjct 8 GAGCAUGAAUGCAGUCUCUCACUACAACAAAUUAUGAAGGCUAGUUUCCCACAUUUGGGGAAAUCUCAGACAUGCG--------GAAUGC 89 Query 156 AAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | || |||||| ||| | || | ||||| |||| | | | |||||||||| Sbjct 90 AGUGGAUGAGCC-UUGCCCUGGGAAAAUCACCUUCAUGAUUAGGAUGUUUCUUCCAUCAGGUAAGUA 155 >> URS0000E9F8AE_9606 Homo sapiens (human) HSALNT0122904 E-value: 4.5e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCA 166 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | Sbjct 12869 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CC 12954 Query 167 UUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||| | || | ||||| ||||| Sbjct 12955 UUGCCCUGGGAAAACCACCUUCGUGAUC 12982 >> URS0000EB2E67_9606 Homo sapiens (human) HSALNT0064079 E-value: 4.5e+0 Identity: 61.32% Query coverage: 47.06% Gaps: 1.89% Alignment: Query 56 AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGC 144 |||||| ||| ||| |||| | | ||| |||| ||||| | || || | |||||| ||||||| |||| | || | Sbjct 215 AAUUGGAGGGGAGCGCAUGAACACAGUCACCCACUACUACAAACUGUGCAGUUGGGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCAGCAC 305 Query 145 UCACCAAGUGCAAUG 159 |||| |||| Sbjct 306 AUCUGGAGUGUAAUG 320 >> URS0000EB43BF_9606 Homo sapiens (human) HSALNT0122902 E-value: 4.5e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCA 166 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | Sbjct 12749 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CC 12834 Query 167 UUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||| | || | ||||| ||||| Sbjct 12835 UUGCCCUGGGAAAACCACCUUCGUGAUC 12862 >> URS0000EB55EB_9606 Homo sapiens (human) HSALNT0122900 E-value: 4.5e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCA 166 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | Sbjct 12840 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CC 12925 Query 167 UUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||| | || | ||||| ||||| Sbjct 12926 UUGCCCUGGGAAAACCACCUUCGUGAUC 12953 >> URS0000EBF3E5_9606 Homo sapiens (human) HSALNT0122903 E-value: 4.5e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCA 166 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | Sbjct 10327 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CC 10412 Query 167 UUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||| | || | ||||| ||||| Sbjct 10413 UUGCCCUGGGAAAACCACCUUCGUGAUC 10440 >> URS00001D2EBE_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.5e+0 Identity: 57.97% Query coverage: 61.54% Gaps: 2.17% Alignment: Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUG 172 | ||||||||||||||| | | ||| ||| | | ||||| | || | ||||||||| |||||| Sbjct 17 UCUACUACCACAAAUUAUGCAGCCGACUUUCCUGCAUUUGGAGAAAUCAUGGGUUAGCAUCCCUGGAGUGCAAUGGAUGAGCCUC-ACCU 105 Query 173 UAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||| | || || ||||| | |||| ||||||||||| Sbjct 106 UAGGAAAAUCACCCUCAUGAUCAUGAGAUCUCCCCUGCCAGGUAAGUA 153 >> URS000260D24C_34632 Rhipicephalus sanguineus (Brown dog tick) uncharacterized LOC119384947 E-value: 4.5e+0 Identity: 56.44% Query coverage: 68.33% Gaps: 17.79% Alignment: Query 44 UUAAAUUUAGGUAAUUG--GCAGGGGCC-GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCC--ACUCUCCCACUUGGGGAGA 128 || ||||| |||| || |||||||||| | |||| |||||| ||||| | || || |||| || |||| | Sbjct 39 UUG---------AAUUGAUACAGGAGCUGGCGCGAACGCCAAGCCCCACUACCAAAAAUUGCAU-GCCCCAUCUAUCCCUGUUUGGGAAA 118 Query 129 -UGG------UAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||| | | ||||| | ||||||||| | | | | || | | | ||| ||||| Sbjct 119 GUGGCGUGCGUCAGCCAAC-------CGCAGUGCAAUGGUUGGCCUCGGCACGGGACCCCGGCCUCUCUGAUC 184 >> URS0000EA20A4_9606 Homo sapiens (human) HSALNT0122899 E-value: 4.6e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCA 166 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | Sbjct 10442 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CC 10527 Query 167 UUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||| | || | ||||| ||||| Sbjct 10528 UUGCCCUGGGAAAACCACCUUCGUGAUC 10555 >> URS0002342DDC_9606 Homo sapiens (human) HSALNT0340791 E-value: 4.6e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCA 166 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | Sbjct 10428 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CC 10513 Query 167 UUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||| | || | ||||| ||||| Sbjct 10514 UUGCCCUGGGAAAACCACCUUCGUGAUC 10541 >> URS0002203C59_9606 Homo sapiens (human) PREDICTED lncRNA (TCONS_00243965) E-value: 4.8e+0 Identity: 63.48% Query coverage: 50.23% Gaps: 4.35% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGA 170 || | ||||||||||||||| ||| | ||||||| ||||||| || | | || | ||||||||| | || | ||| Sbjct 242 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCAGGGGUCAGCAUGUCCAGAGUGCAAUGGAUAAG-CCUUGC 331 Query 171 UGUAGGCCACGGCCCUUCUUGAUC 194 | || | ||||| ||||| Sbjct 332 CCUGGGAAAACCACCUUCGUGAUC 355 >> URS00022AEDCE_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000076052.1) E-value: 6e+0 Identity: 63.79% Query coverage: 50.68% Gaps: 4.31% Alignment: Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUG 169 | ||| ||||| ||||||||| ||| | | |||||| ||||||| || | | || | | ||||||||| | || | ||| Sbjct 445 CGCCCACUACCGCAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCAGAGUGCAAUGGAUAAG-CCUUG 534 Query 170 AUGUAGGCCACGGCCCUUCUUGAUC 194 | || || |||| ||||| Sbjct 535 CCCUGGGAAACCCACCUUUGUGAUC 559 >> URS0000EC068C_9606 Homo sapiens (human) HSALNT0207380 E-value: 6.1e+0 Identity: 67.11% Query coverage: 34.39% Gaps: 6.58% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCA 147 ||||| ||||| ||||||||||||||| ||||| | |||||| | || | |||||| | ||| Sbjct 4022 ACGAACAUAGUCCCCCACUACCACAAAUUAUGCAGUCCAGUUUCCCACAUUUGG-----GAAAACCACAGGCGUCA 4092 >> URS00023F002F_3694 Populus trichocarpa (black cottonwood) long non-coding RNA (PTRI_LNC001676) E-value: 1.9e-21 Identity: 70.62% Query coverage: 95.02% Gaps: 7.11% Alignment: Query 12 AGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCG-CGAACGCGUACCCCCUCUACCACAA 97 ||||| | ||||||| || | || ||| | | ||||||||||| | | ||| ||||||||||||||| Sbjct 27337 AGGGCAUAGAAGUAAAAAAAGUUG------UUACUCAUU-------UAGACAGGGGCCGCGGCUAGCGCAGGCCCCCUCUACCACAA 27410 Query 98 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCC 184 ||| |||||| |||||||||||||||||||||| ||||| || | | | ||||||||| ||||| |||||| | | Sbjct 27411 AUUUUGACGUACACUCUCCCACUUGGGGAGAUGUUAAACUGGUGCACCCGCUGAGUGCAAUGCUAGCCACCAGCCUAGGCCUGAG-C 27496 Query 185 CUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||| ||||||| || |||||||||||||||||||| Sbjct 27497 CUUAUUGAUCGCCCAAAGACCCCGUCCAGGUAAGUAU 27533 >> URS00023427EA_9606 Homo sapiens (human) HSALNT0321486 E-value: 7.2e+0 Identity: 60.78% Query coverage: 45.25% Gaps: 1.96% Alignment: Query 60 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA--UGGUAAACCAACGCGCUCAC 148 |||||| || | ||| ||||| ||||||||||||||| || | | |||||| | || || | | || | | Sbjct 256 UGCAGGGAAAGCACAAACAAAAUCCCCCACUACCACAAAUUAUGCAGUUGAGUUUCCCACAUUUGGUGAAAUCACAGGUGUCAGCACAUCC 346 Query 149 CAAGUGCAAUG 159 ||||||||| Sbjct 347 AGAGUGCAAUG 357 >> URS00001BF248_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.2e+0 Identity: 57.69% Query coverage: 66.97% Gaps: 8.33% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA-------AG 152 || |||| | ||||| ||||||||||||||| || | | | |||| | || | |||||| | ||| | || Sbjct 10 GCAUGAACACAGUCCCCCACUACCACAAAUUAUGCAGUUGAGUGUUCCACAUUUGGGG-----AAACCACAGGAGUCAAUACAUCUGGAG 94 Query 153 UGCAAU-GUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAA 217 |||| | | | ||| | || || ||||| |||| | | || ||||||||| Sbjct 95 AGCAACAGAUAAGCCUUGCCCUGGGAAACCCACCUUCAUGAUGAUGCUAUUGCUCCUUCCAGGUAA 160 >> URS0000828BD4_29172 Dictyocaulus viviparus (bovine lungworm) U1 spliceosomal RNA E-value: 9.3e+0 Identity: 59.04% Query coverage: 70.59% Gaps: 11.45% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGG-----AGAUGGUAAACCAACGCGCUCA 147 ||||||||||||||| |||| | || ||||| | || || || | ||| | | | |||| || || Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUUACUUCAACUCGAAGUAGCCACAUGGGUC-----AGCCCUAC 86 Query 148 CCAAGUGCAAUGUGAGCCAUU---GAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||||||||| || | ||| || | || |||||||||||| | |||| |||||||||| Sbjct 87 GAAAGUGCAAUGUAAGGGCCUCACCAUGGGGGUCCCG--CCUUCUUGAUCGCGAGAUCCCCCCAGCCAGGUAAGUU 160 >> URS00002E677B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.9e+0 Identity: 71.67% Query coverage: 26.24% Gaps: 3.33% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU 129 ||| || | ||| ||||||||||||||| ||| | | |||||| ||||||| | Sbjct 12 AUGAAUGCAGUCUCCCACUACCACAAAUUAUGCAGUCAAGUUUCCCACAUUUGGGGAAAC 71 >> URS00005DD576_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1e+1 Identity: 63.64% Query coverage: 40.72% Gaps: 16.16% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCA------- 150 | | ||| || ||||| ||||||||||||||| ||| | | | || | ||||||| || || | | ||| || Sbjct 10 GUGUGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGUCGAGUUUACCGAAUUUGGGGAAAU-------CACAGGGGUCAGCACAUCUGG 92 Query 151 AGUGCAAUG 159 ||||||||| Sbjct 93 AGUGCAAUG 101 >> URS0000127C31_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e+1 Identity: 56.58% Query coverage: 64.71% Gaps: 10.53% Alignment: Query 78 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCA-------AGUGCAAU 158 || |||| ||||||||||||||| || | | ||| || |||||| |||||| | | ||| || |||||||| Sbjct 10 GCAGUCCCCUACUACCACAAAUUAUGCAGUUGAGUUUCCGGCAUUUGGGG-------AAACCACAGGGGUCAGCACAUCCGGAGUGCAAU 92 Query 159 GUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | ||| | || || ||| |||| || ||||||||||| Sbjct 93 GGAUAAGCCUGACCUGGGAAACCAAUCUUUCUGAUUAUGGUAUCUCCUGUGCCAGGUAAGUA 154 >> URS00008B2E1F_9606 Homo sapiens (human) non-protein coding lnc-SEC61G-7:5 E-value: 1.2e+1 Identity: 66.28% Query coverage: 38.01% Gaps: 12.79% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAU 167 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | | ||| || || || ||| | || Sbjct 307 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCA-------GGGGUCAGCAUGUCCAGAGUG--CAAU 383 >> URS00008BD3C8_9606 Homo sapiens (human) non-protein coding lnc-SEC61G-7:9 E-value: 1.2e+1 Identity: 66.28% Query coverage: 38.01% Gaps: 12.79% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAU 167 || | ||||||||||||||| ||| | ||||||| ||||||| || | | | | ||| || || || ||| | || Sbjct 438 CCUCACUACCACAAAUUAUGCAGUCAAGUCUCCCAUAUUUGGGGACAUCGCA-------GGGGUCAGCAUGUCCAGAGUG--CAAU 514 >> URS000196AA07_9823 Sus scrofa (pig) lncRNA (ENSSSCG00015003206.1) E-value: 1.2e+1 Identity: 57.55% Query coverage: 47.96% Gaps: 0.00% Alignment: Query 27 ACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 || | | |||||| ||||||||||| | ||| | || || | | ||| || ||| | | || |||||| || Sbjct 2046 ACUGGCAGAACCAAAAGUUAAAUUUAGGCUGGUCUCAGAGUCCAUGCUCUUGGGCCCCCUACCUUCCAAAUUAUGUGUUGUCCACAGUC 2134 Query 116 CCACUUGGGGAGAUGGU 132 | | ||| | ||| Sbjct 2135 CUAGGUGGACAAUGGGU 2151 >> URS00023A8153_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC001221) E-value: 1.3e+1 Identity: 56.94% Query coverage: 62.90% Gaps: 6.94% Alignment: Query 81 UACCCCCUCUACCACAA-AUUAUGACGUCCACUCUCCCACUUGGGG----AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU 160 ||||| | |||||| |||| || || || ||| ||||| || ||| | | | || |||||| Sbjct 160986 AGCCCCCAUUGCCACAAAAUUAGGAAGUAAGCUAGACCAUUUGGGACCUUAGGUGGACAGUC-----ACCCAAAUUUUGCAAUAA 161065 Query 161 GAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | | ||||||| | ||||||||||| || | | | || | | |||||| Sbjct 161066 AGGUAACAAGACUAGGCCAUAGGUCUUCUUGAUCGCCCAUUGGCUCCAUAGAAGUAAGU 161124 >> URS000081EEA6_29172 Dictyocaulus viviparus (bovine lungworm) U1 spliceosomal RNA E-value: 1.4e+1 Identity: 59.04% Query coverage: 70.59% Gaps: 11.45% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGG-----AGAUGGUAAACCAACGCGCUCA 147 ||||||||||||||| |||| | || ||||| | || || || | ||| | | | |||| || || Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUUACUUCAACUCGAAGUAGCCACAUGGGUC-----AGCCCUAC 86 Query 148 CCAAGUGCAAUGUGAGCCAUU---GAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||||||| | ||| || | || ||||||||||| | |||| |||||||||| Sbjct 87 GAAAGUGCAAUGUGAGGGCCUCACCAUGGGGGUCCCG--CCUUCUUGAUCACGAGAGCCCCCCAGCCAGGUAAGUU 160 >> URS0000C9E9F4_45464 Teladorsagia circumcincta U1 spliceosomal RNA E-value: 1.5e+1 Identity: 58.64% Query coverage: 70.59% Gaps: 6.17% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCA---ACGCGCUCACCAA 151 ||||||||||||||| | |||||| || ||||| | || | || | | || || | || | || | || Sbjct 4 GGGCCGCGCGAACGC--AGCCCCUCACACAAAAAUUUAGCUGUUGGCGAACCUCAAUUCGAAGCUGCCACACGGGUCAGCCGGUGCUAAA 91 Query 152 GUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||| | | ||| ||| | | |||| ||||||| ||| ||| |||||||||| Sbjct 92 GUGCAAUGCACGGGCCUCACCAUGGAGGUCCUG--CCUUGUUGAUCGCAAGUCUCUCCCAGCCAGGUAAGUU 161 >> URS0002394347_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC000572) E-value: 5.1e-16 Identity: 70.11% Query coverage: 82.35% Gaps: 1.09% Alignment: Query 38 CAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 123 | | |||| | | ||| | | || ||||||||||||||||| |||| || ||||||||||||| || ||| |||||||| Sbjct 42632 CUAUGUUUAGACUAAGGAAUUGGGUAGGGGCCGCGCGAACGCAAGACCCCACUGCCACAAAUUAUGAAGUAGGCUCGGCCACUUGG 42717 Query 124 GGAGAUGGUAAACCAACGC-GCUCACCAAGUGCAAUGUGAGCCAUU-GAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCC 207 || | | | | | ||| | |||||||||| | || | | |||||| | |||||||||| | || | |||||| Sbjct 42718 ACUGACCUUGGGCUAGCACCCCUCCCGAAGUGCAAUGGAGGUCACUAGGCCCAGGCCAUGAGCCUUCUUGAUAGCCCAUUGACCCC 42803 Query 208 GUCCAGGUAAGU 219 |||||||||||| Sbjct 42804 GUCCAGGUAAGU 42815 >> URS00023CE3D2_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC000577) E-value: 5.1e-16 Identity: 70.11% Query coverage: 82.35% Gaps: 1.09% Alignment: Query 38 CAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 123 | | |||| | | ||| | | || ||||||||||||||||| |||| || ||||||||||||| || ||| |||||||| Sbjct 38932 CUAUGUUUAGACUAAGGAAUUGGGUAGGGGCCGCGCGAACGCAAGACCCCACUGCCACAAAUUAUGAAGUAGGCUCGGCCACUUGG 39017 Query 124 GGAGAUGGUAAACCAACGC-GCUCACCAAGUGCAAUGUGAGCCAUU-GAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCC 207 || | | | | | ||| | |||||||||| | || | | |||||| | |||||||||| | || | |||||| Sbjct 39018 ACUGACCUUGGGCUAGCACCCCUCCCGAAGUGCAAUGGAGGUCACUAGGCCCAGGCCAUGAGCCUUCUUGAUAGCCCAUUGACCCC 39103 Query 208 GUCCAGGUAAGU 219 |||||||||||| Sbjct 39104 GUCCAGGUAAGU 39115 >> URS0000407D1B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.6e+1 Identity: 62.22% Query coverage: 39.82% Gaps: 10.00% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 |||| || | || || ||||| ||||| |||||||| ||| | | |||| | ||||||| || | | | ||| || Sbjct 4 GGGGGGGCACAAAGGCAGUCCCCCACUACCCCAAAUUAUUCAGUCUAGUUUCCCGAAUUUGGGGAAAUUGCAGG-------GAUCAGCAU 86 >> URS0000050376_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.7e+1 Identity: 59.59% Query coverage: 61.09% Gaps: 13.01% Alignment: Query 86 CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA-------AGUGCAAUG--UGAGCCA 166 || ||||||||||||||| ||| | | |||||| | || | ||| || | ||||| || | ||||||| |||||| Sbjct 2 CCACUACCACAAAUUAUGCAGUCGAGUUUCCCACAUACGG-----GAAAAUCACAGGGCUCAGCACAUACAGAAUGCAAUGGAUGAGCCU 86 Query 167 UUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGAC--CCCGUCCAGGUAAGUA 220 | | | || | || || ||| | | | | ||||||||||| Sbjct 87 U-GCCUUGGGAAA--ACCUUUUUUGUAAUCAUGGUGUCUCCUUUGCCAGGUAAGUA 139 >> URS00008265A1_29172 Dictyocaulus viviparus (bovine lungworm) U1 spliceosomal RNA E-value: 1.8e+1 Identity: 59.04% Query coverage: 70.59% Gaps: 11.45% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGG-----AGAUGGUAAACCAACGCGCUCA 147 ||||||||||||||| |||| | || ||||| | || || || | ||| | | | |||| || || Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUUACUUCAACUCGAAGUAGCCACAUGGGUC-----AGCCCUAC 86 Query 148 CCAAGUGCAAUGUGAGCCAUU---GAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||||||||| || | ||| || | || |||||||||||| | |||| |||||||||| Sbjct 87 GAAAGUGCAAUGUAAGGGCCUCACCAUGGGGGUCCCG--CCUUCUUGAUCGCGAGAGCCCCCCAGCCAGGUAAGUU 160 >> URS00005FFA28_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.9e+1 Identity: 57.33% Query coverage: 66.06% Gaps: 3.33% Alignment: Query 73 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG- 159 ||| || ||||| ||||||||||||||| || | | ||| | |||| || || | ||| | |||||| || Sbjct 13 UGAAUGCAGUCCCCCACUACCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUGGAGAAAUCUCAGGAGUCAGCGUAUCCAGAGUGCAGUGG 102 Query 160 -UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAG 218 |||| | | | | || | |||| ||||| | | || | ||||||| Sbjct 103 CUGAGUC-UAGCCCUGGGAAAACCACCUUUGUGAUCACGGUACCUCUCCUGCAAGGUAAG 161 >> URS000240CF80_3827 Cicer arietinum (chickpea) long non-coding RNA (CARI_LNC002567) E-value: 1.9e+1 Identity: 85.11% Query coverage: 21.27% Gaps: 0.00% Alignment: Query 175 GGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||| || ||||||||||| || | |||||| ||||||||||||| Sbjct 1 GGCCAUGGGCCUUCUUGAUCACCCAUUGACCCCAUCCAGGUAAGUAU 47 >> URS0002338703_9606 Homo sapiens (human) HSALNT0321487 E-value: 2e+1 Identity: 59.60% Query coverage: 43.89% Gaps: 2.02% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA--UGGUAAACCAACGCGCUCACCAA 151 ||| || | ||| ||||| ||||||||||||||| || | | |||||| | || || | | || | | | Sbjct 39 GGGGAAAGCACAAACAAAAUCCCCCACUACCACAAAUUAUGCAGUUGAGUUUCCCACAUUUGGUGAAAUCACAGGUGUCAGCACAUCCAGA 129 Query 152 GUGCAAUG 159 |||||||| Sbjct 130 GUGCAAUG 137 >> URS00022B48B7_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000084783.1) E-value: 2e+1 Identity: 54.66% Query coverage: 70.14% Gaps: 3.73% Alignment: Query 54 GUAAUUGGC-AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACG 141 | | || || |||| | ||| | || | |||||| |||||||| ||| | | ||| ||| |||| || | | | | Sbjct 416 GAAUUUUGCAAGGGAUAACAUGAAUGUAGUUCCUCACUACCAUAAAUUAUGCAGUCGAGUUUCCUGCACCUGGGAGAAUCGCAGGAGUAAG 506 Query 142 C--GCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG-GCCGUCGACCCCG 208 | | |||||||| | | | | || | ||||| ||||| | | || ||| | Sbjct 507 CACAGCUAUGGGGUGCAAUGAGUGAGCCUCACCCUGGGAAACCACCUUCAUGAUCAUGGCAUCUCCCCUG 576 >> URS0000E9D491_9606 Homo sapiens (human) HSALNT0064074 E-value: 2.1e+1 Identity: 57.35% Query coverage: 59.73% Gaps: 3.68% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 ||| ||| |||| | | ||| |||| ||||| | || || | |||||| ||||||| |||| | || | || Sbjct 140 GGGAGCGCAUGAACACAGUCACCCACUACUACAAACUGUGCAGUUGGGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCAGCACAUCUGGAG 230 Query 153 UGCAAUG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG 195 || |||| |||||| | | | | |||| |||| | Sbjct 231 UGUAAUGGAUGAGCCGUG-CCCUGGAAAAACCACCUUUGUGAUUG 274 >> URS0000E0EDEF_7266 Drosophila guanche non-coding RNA E-value: 2.1e+1 Identity: 55.74% Query coverage: 79.64% Gaps: 5.46% Alignment: Query 45 UAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA--GAUGGUA 133 | ||||| | | ||| | |||||||||| ||| |||||| |||||| | | | ||| | ||| || | | Sbjct 452 CAUAUUUAUUAUUUAUGUCGGGACGGCGCGAACGCCAUUCCCGGCUACCAAAAAUUACACGCACGAGUUAUUCACAUUAGGAAUAAUCGCA 542 Query 134 AACCAACGCGCUCACCAAGUGCAAUGU--GAGCCAUU-GAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCG--UCCAGGUAAGU 219 | | | | |||||||||| |||| | ||| | ||||| ||||| | || ||| | |||||||||| Sbjct 543 GAGGUCAACUCAGCCGAAGUGCAAUGGCCAAGCCUCACUCCGGAGGAACC--GCCUUCGUGAUCA-CGGUUCACCUCUACGCCAGGUAAGU 630 Query 220 A 220 | Sbjct 631 A 631 >> URS000239B89E_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC007076) E-value: 1.9e-23 Identity: 69.67% Query coverage: 95.48% Gaps: 4.74% Alignment: Query 11 AAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAU 99 | ||||||| || | | || | ||| || | | |||||||||||||||||||| ||||||||||||||||| Sbjct 2865 AUGGGCCUGCAAAAAUAAAAUUG--GUUAAAACUUG--------AAUUGGGCAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAU 2943 Query 100 UAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUC 188 |||||||| ||| ||||||||| || || || ||| | | |||||||||| | | || ||||||| || |||| Sbjct 2944 UAUGACGUAGGCUCGACCACUUGGGCCGACCUUAGACGGGCGCCCCUCCUAAGUGCAAUGGAGGUCGCCAAUCUAGGCCAUGGGUCUUC 3032 Query 189 UUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 ||||||| || | |||||||||||||||||||| Sbjct 3033 UUGAUCGCCCAUUGACCCCGUCCAGGUAAGUAU 3065 >> URS00023E79E0_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC008999) E-value: 2.9e-37 Identity: 86.39% Query coverage: 85.97% Gaps: 0.52% Alignment: Query 32 AGGGACCAA-AUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 117 ||||| ||| | ||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22201 AGGGAUCAAAAGUUUAAUUCUUUAAAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 22287 Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGAC 204 |||||||||||||||| | | ||| | | |||||||||||| | |||| ||| |||||||||| ||||| ||| | |||||||| Sbjct 22288 UCUUGGGGAGAUGGUAAGCUAGCGCACCCGCCAAGUGCAAUGCGGGCCACUGACCUAGGCCACGGGCCUUCAUGACCAACCGUCGAC 22374 Query 205 CCCGUCCAGGUAAGUAU 221 ||||||||||||||||| Sbjct 22375 CCCGUCCAGGUAAGUAU 22391 >> URS0002407270_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC008999) E-value: 2.9e-37 Identity: 86.39% Query coverage: 85.97% Gaps: 0.52% Alignment: Query 32 AGGGACCAA-AUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 117 ||||| ||| | ||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 38571 AGGGAUCAAAAGUUUAAUUCUUUAAAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 38657 Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGAC 204 |||||||||||||||| | | ||| | | |||||||||||| | |||| ||| |||||||||| ||||| ||| | |||||||| Sbjct 38658 UCUUGGGGAGAUGGUAAGCUAGCGCACCCGCCAAGUGCAAUGCGGGCCACUGACCUAGGCCACGGGCCUUCAUGACCAACCGUCGAC 38744 Query 205 CCCGUCCAGGUAAGUAU 221 ||||||||||||||||| Sbjct 38745 CCCGUCCAGGUAAGUAU 38761 >> URS000240CBD1_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC008999) E-value: 2.9e-37 Identity: 86.39% Query coverage: 85.97% Gaps: 0.52% Alignment: Query 32 AGGGACCAA-AUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 117 ||||| ||| | ||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 38670 AGGGAUCAAAAGUUUAAUUCUUUAAAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 38756 Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGAC 204 |||||||||||||||| | | ||| | | |||||||||||| | |||| ||| |||||||||| ||||| ||| | |||||||| Sbjct 38757 UCUUGGGGAGAUGGUAAGCUAGCGCACCCGCCAAGUGCAAUGCGGGCCACUGACCUAGGCCACGGGCCUUCAUGACCAACCGUCGAC 38843 Query 205 CCCGUCCAGGUAAGUAU 221 ||||||||||||||||| Sbjct 38844 CCCGUCCAGGUAAGUAU 38860 >> URS0002418F8F_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006389) E-value: 2.3e+1 Identity: 63.04% Query coverage: 41.63% Gaps: 1.09% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 ||||| | | | |||| ||| |||| ||||| | | || || |||||| | ||| | | | | | |||||||||| Sbjct 14121 GCGAAUG-GAAACCCCGCUAUCACAGAUUAUUGCAUAGACCCUGCCACUUAGACAGACCUUGGGCAAGUACCCCUCCCAAGUGCAA 14205 Query 158 UGUGAG 163 || | Sbjct 14206 UGAAGG 14211 >> URS00027E7E3C_9796 Equus caballus (horse) lncRNA (ENSECAG00000046291.1) E-value: 2.3e+1 Identity: 58.20% Query coverage: 50.23% Gaps: 9.02% Alignment: Query 34 GGACCAAAUUUUAAAUUU--------AGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 |||||| ||||| | | ||| |||||| | | |||| | || || ||| ||| ||||||| ||| | | || Sbjct 106 AGACCAAUUUUUACUUCUUCCAACAACCGUAUGAAACAGGGGAAAGUGAGAACACAGUCCGCCACUAUCACCAAUUAUGCAGUCAAGUUUC 196 Query 116 CCAC--UUGGGGAGAUGGUAAACCAACGCGC 144 |||| ||||| | || | | | ||| Sbjct 197 CCACAGUUGGGUAAAUCGCAGAGGUCAGCGU 227 >> URS0000EC1EB1_9606 Homo sapiens (human) HSALNT0064076 E-value: 2.6e+1 Identity: 59.80% Query coverage: 45.25% Gaps: 1.96% Alignment: Query 60 GGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCAC 148 | | ||| ||| |||| | | ||| |||| ||||| | || || | |||||| ||||||| |||| | || | Sbjct 91 GUCUGGGAGCGCAUGAACACAGUCACCCACUACUACAAACUGUGCAGUUGGGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCAGCACAUCU 181 Query 149 CAAGUGCAAUG 159 |||| |||| Sbjct 182 GGAGUGUAAUG 192 >> URS00019D2C5B_506608 Cinara cedri non-coding RNA E-value: 2.7e+1 Identity: 62.35% Query coverage: 38.01% Gaps: 2.35% Alignment: Query 46 AAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAU 129 | | ||| |||| |||| | ||||| |||| ||| |||||| |||||||| | | |||| || |||| | Sbjct 64 CAUAUACGGUCAUUGUGAGGGACGGCGCGUACGCAGU-CCCAACUACCAAAAAUUAUGCGUCCGAGAUAUCCACAUUAGGGAUAC 147 >> URS0000120EDC_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.8e+1 Identity: 60.26% Query coverage: 67.42% Gaps: 5.77% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--ACCAACGCGCUCACCAAGUGCAA 157 ||||| | || | || ||||||||||| || | | ||| || || |||| || | || | || || ||||||| Sbjct 10 GCGAAUGUAGUCCUCUACUUUCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCA-GGAGUGCAA 98 Query 158 U--GUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC-GGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||| | || || || ||| || || | |||| |||||||||||| Sbjct 99 UAGAUGAGCCAUAGCCUGAGAAAACCACC-UUCAUGGUCAUGAUUAUUUCCCCUUCCAGGUAAGUA 163 >> URS0002359EE6_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007720) E-value: 3.8e-2 Identity: 63.64% Query coverage: 49.77% Gaps: 0.91% Alignment: Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGU 173 || | ||||||||||||||| | ||||||| ||| ||| | ||| | ||||| |||| || ||| | | Sbjct 2914 CCUAUUGUCACAAAUUAUGACGUAAGUUUAAUGACUUGGGUCGAUCUUAAGCAAACCACACUCCAAAGUGAAAUGGAAGUCAUCAACCU 3002 Query 174 AGGCCACGGCCCUUCUUGAUC 194 |||||| |||| | | ||||| Sbjct 3003 AGGCCAUGGCCUUAC-UGAUC 3022 >> URS0002371D4C_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007720) E-value: 3.8e-2 Identity: 63.64% Query coverage: 49.77% Gaps: 0.91% Alignment: Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAU 171 || | ||||||||||||||| | ||||||| ||| ||| | ||| | ||||| |||| || ||| | Sbjct 12717 CCUAUUGUCACAAAUUAUGACGUAAGUUUAAUGACUUGGGUCGAUCUUAAGCAAACCACACUCCAAAGUGAAAUGGAAGUCAUCAAC 12803 Query 172 GUAGGCCACGGCCCUUCUUGAUC 194 ||||||| |||| | | ||||| Sbjct 12804 CUAGGCCAUGGCCUUAC-UGAUC 12825 >> URS000239BFC3_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007720) E-value: 2.9e+1 Identity: 48.65% Query coverage: 66.97% Gaps: 12.16% Alignment: Query 68 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 |||| | || | ||||| | || ||| ||||| | | | | | | | || |||| Sbjct 5162 CCGCACCAAU------------------GCAGUAUGAUAUAAGUUCAACCAUUUGGGUCGGGUUUCGGCGGGCACCCCUCCAAAUUGCA 5232 Query 157 AUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGU 215 ||| || | | ||| ||| | ||||| |||| | || | ||| || ||| Sbjct 5233 AUGGUAGUUACCAACGUAAACCAUGACCCUUAUUGAACCCCCAUUGACUUAGUUCAGUA 5291 >> URS00023B6893_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007721) E-value: 2.9e+1 Identity: 48.65% Query coverage: 66.97% Gaps: 12.16% Alignment: Query 68 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 |||| | || | ||||| | || ||| ||||| | | | | | | | || |||| Sbjct 6260 CCGCACCAAU------------------GCAGUAUGAUAUAAGUUCAACCAUUUGGGUCGGGUUUCGGCGGGCACCCCUCCAAAUUGCA 6330 Query 157 AUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGU 215 ||| || | | ||| ||| | ||||| |||| | || | ||| || ||| Sbjct 6331 AUGGUAGUUACCAACGUAAACCAUGACCCUUAUUGAACCCCCAUUGACUUAGUUCAGUA 6389 >> URS000241A118_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC007720) E-value: 3.8e-2 Identity: 63.64% Query coverage: 49.77% Gaps: 0.91% Alignment: Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAU 171 || | ||||||||||||||| | ||||||| ||| ||| | ||| | ||||| |||| || ||| | Sbjct 12727 CCUAUUGUCACAAAUUAUGACGUAAGUUUAAUGACUUGGGUCGAUCUUAAGCAAACCACACUCCAAAGUGAAAUGGAAGUCAUCAAC 12813 Query 172 GUAGGCCACGGCCCUUCUUGAUC 194 ||||||| |||| | | ||||| Sbjct 12814 CUAGGCCAUGGCCUUAC-UGAUC 12835 >> URS00027F0117_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034700.1) E-value: 3.4e+1 Identity: 56.04% Query coverage: 89.59% Gaps: 10.14% Alignment: Query 18 UGUAAGUAAACAA--GAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUA 101 |||||| || || | | | || ||| | | ||| | ||| ||||| | || | || ||||||||| Sbjct 22763 UGUAAGCAAGCACAUGUGAGUGGAACUUUGAGACCAAGGGA------AGG----AUGCGAAUGUAGUCCUCUACUUUCACAAAUUA 22838 Query 102 UGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--ACCAACGCGCUCACCAAGUGCAAU--GUGAGCCAUUGAUGUAGGCCACG 181 || || | | ||| || || |||| || | || | || || |||||||| |||||||| | || || Sbjct 22839 UGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCA-GGAGUGCAAUAGAUGAGCCAUAGCCUGAGAAAACC 22923 Query 182 GCCCUUCUUGAUCG-GCCGUCGACCCCGUCCAGGU 215 || ||| || || | |||| ||||||| Sbjct 22924 ACC-UUCAUGGUCAUGAUUAUUUCCCCUUCCAGGU 22957 >> URS0000409780_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.8e+1 Identity: 67.12% Query coverage: 32.13% Gaps: 2.74% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA 134 ||| | || ||||| ||||| | |||||||| |||| ||| | | ||| || ||||||| || | Sbjct 4 GGGACAGCAUUAACGCAGUCCCCCACCACCACAAACUAUGCAGUCAAGUUUCCUGCAUUUGGGGAAAUUCCAG 76 >> URS0000CBBE53_45464 Teladorsagia circumcincta U1 spliceosomal RNA E-value: 3.8e+1 Identity: 59.52% Query coverage: 70.59% Gaps: 13.10% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC-CACUUGG-GGA------GAUGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | ||| || || ||| | | || | ||| | | || Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCCGUUGGCUAACCUCACCUCGAGGUUGCCACGCGGGUCAGC------CUUC 85 Query 147 ACC-AAGUGCAAUGUGAGCCAUUGA---UGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || |||||||||||||| | | | || | || ||||| |||||| | |||| |||||||||| Sbjct 86 ACUAAAGUGCAAUGUGAGGGCCUCACCACGGGGGUCCCG--CCUUCCUGAUCGCGAGAUCCCCCCAGCCAGGUAAGUU 161 >> URS00000B7CAB_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.4e+1 Identity: 56.13% Query coverage: 68.33% Gaps: 3.23% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 || ||| || | ||| |||||||||||| | ||| | | ||| || ||||||| | | | || | ||||||| Sbjct 10 GCAUGAAUGCAGUCUCCCACUACCACAAAUUUCGCAGUCGAAUUUCCUGCAUUUGGGGAAACAGCAGGGGUCAGCACAUCUGGAGUGCAA 99 Query 158 UG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || | ||| | | | || | |||| ||| || | ||||||||||| Sbjct 100 UGGAUAAGC-CUCGCCCUGGGAAAACUACCUUUGUGACUAUGGUAUUUCCUCUGCCAGGUAAGUA 163 >> URS000048B7EE_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.4e+1 Identity: 56.13% Query coverage: 68.78% Gaps: 1.94% Alignment: Query 69 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 | | ||| | |||| ||||||||||||||| || | | | ||| ||||||| || | || | | |||| Sbjct 8 AGUGUCAACACAGUUCCCCACUACCACAAAUUAUGCACUCAAGUUUUCCAGCUUUGGGGAUAUCUCAGGGUUCAGCACAUCUGACAUGCA 97 Query 157 AUGU-GAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||| | | ||| | ||| | |||| ||||| | |||| ||| |||||| Sbjct 98 AUGGAUAAGCCUUGCCCUGGGCUAAACACCUUUGUGAUCAUGGCUUAUCCCCUGCCAACUAAGUA 162 >> URS000082708E_29172 Dictyocaulus viviparus (bovine lungworm) U1 spliceosomal RNA E-value: 5.6e+1 Identity: 58.43% Query coverage: 70.59% Gaps: 11.45% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU--CUCCCACUUGGGG-----AGAUGGUAAACCAACGCGCUCA 147 ||||||||||||||| |||| | || ||||| | || || || | ||| | | | |||| || || Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUUACUUCAACUCGAAGUAGCCACAUGGGUC-----AGCCCUAC 86 Query 148 CCAAGUGCAAUGUGAGCCAUU---GAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||||||||| || | ||| || | || |||||||||| | | |||| |||||||||| Sbjct 87 GAAAGUGCAAUGUAAGGGCCUCACCAUGGGGGUCCCG--CCUUCUUGAUAGCGAGAGCCCCCCAGCCAGGUAAGUU 160 >> URS0000EF560D_9606 Homo sapiens (human) novel transcript, antisense to SLC2A2 E-value: 5.8e+1 Identity: 60.20% Query coverage: 43.44% Gaps: 2.04% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 ||| ||| |||| | | ||| |||| ||||| | || || | |||||| ||||||| |||| | || | || Sbjct 139 GGGAGCGCAUGAACACAGUCACCCACUACUACAAACUGUGCAGUUGGGUUUCCCACAUUUGGGGAAAUGGCAGGGGUCAGCACAUCUGGAG 229 Query 153 UGCAAUG 159 || |||| Sbjct 230 UGUAAUG 236 >> URS00001F928C_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.8e+1 Identity: 65.15% Query coverage: 28.96% Gaps: 13.64% Alignment: Query 78 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACG 141 || ||||| | |||||||||||| ||| | | |||||| ||||||| || || | Sbjct 21 GCUGUCCCCCAAUUCCACAAAUUAUGUAGUCAAGUUUCCCACAUUUGGGGAAAU-------CAGAG 79 >> URS00022AFC7F_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000076052.1) E-value: 5.8e+1 Identity: 66.67% Query coverage: 34.39% Gaps: 2.56% Alignment: Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAU 158 | ||| ||||| ||||||||| ||| | | |||||| ||||||| || | | || | | |||||||| Sbjct 1297 CGCCCACUACCGCAAAUUAUGCAGUCGAGUUUCCCACAUUUGGGGAAAUCGCAGGGGUCAGCACAUCCAGAGUGCAAU 1374 >> URS0001A1E6DA_7957 Carassius auratus (goldfish) lncRNA (ENSCARG00000024231.1) E-value: 5.9e+1 Identity: 58.04% Query coverage: 50.68% Gaps: 1.79% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAA 151 |||| |||| ||| | | |||| | | | ||||||| ||| | |||| |||| || || | | || |||| Sbjct 2638 AGGGAGAGCGCUAACACAUUUCCCCAAUUCUAUUAAUUAUGCAGUCGAGACUCCUACUUUUGGGGAAUUCUCAGGAGUCCGUACACCUG 2726 Query 152 GUGCAAUGUGAGCCAUUGAUGUA 174 | | | ||||||| | || | Sbjct 2727 GAGAA--CCGAGCCAUGGGUGAA 2747 >> URS0000CAB135_45464 Teladorsagia circumcincta U1 spliceosomal RNA E-value: 6e+1 Identity: 59.88% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC-CACUU-GGGGA------GAUGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | ||| || || ||| | | || | ||| | || ||| Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCCGUUGGCUAACCUCACCUCGAGGUUGCCACGCGGGUCAGCCUUCGC---- 87 Query 147 ACCAAGUGCAAUGUGAGCCAUUG---AUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| ||| | | | || | || |||||||||||| | |||| |||||||||| Sbjct 88 -UGAAGUGCAAUGCGAGGGCCUCACCACGGGGGUCCCG--CCUUCUUGAUCGCGAGAUCCCCCCAGCCAGGUAAGUU 161 >> URS0000533424_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.5e+1 Identity: 60.38% Query coverage: 43.89% Gaps: 14.15% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU-------GCAAUGUG- 161 || || || |||||||||||| || || | | |||||| | || | |||| | | | ||| || | |||||| | Sbjct 23 GUCCCUCCACUACCACAAAUUUUGCAGUUGAAUUUCCCACAUUUGGGG-----AAACUGAAGGGGUCAGCACAUCUGGACAGCAAUGGGU 107 Query 162 -AGCCAUUGAUGUAGG 176 || | ||| | | || Sbjct 108 AAG-CCUUGCUCUGGG 122 >> URS0000CA1D6C_45464 Teladorsagia circumcincta U1 spliceosomal RNA E-value: 6.9e+1 Identity: 58.58% Query coverage: 70.14% Gaps: 15.38% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC---CACUCUCCCACUU-GGGGA------GAUGGUAAACCAACGCGCU 145 |||||||||||||| || | | || ||||| | ||| || ||| || | | || | ||| | || || Sbjct 5 GGCCGCGCGAACGCA--GCCUCACACGCAAAAAUUUAGCCGUUGGCCAACCUC--ACCUCGAGGUUGCCACGCGGGUCA------GCCCU 84 Query 146 CACC-AAGUGCAAUGUGAGCCAUUGA---UGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || |||||||||||||| | | | || | || |||| ||||||| | ||||| | |||||||| Sbjct 85 AACUAAAGUGCAAUGUGAGAGCCUCACCACGGGGGUCCCG--CCUUUUUGAUCGCGAGAUCCCCCCGGCAAGGUAAGUU 161 >> URS0002335FBF_9606 Homo sapiens (human) HSALNT0390841 E-value: 7.2e+1 Identity: 63.16% Query coverage: 40.72% Gaps: 6.32% Alignment: Query 42 UUUUAAAUUUAGGUAAUUGGCAGG----GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAG 127 |||| || ||| | | | |||| |||| || || ||||| ||||||||| ||||| | | | | || || | ||||| Sbjct 811 UUUU-AAACUAGUUCAAUCACAGGACAGAAAAGCGCAAAAGCAGUCCCCCACUACCACAAGUUAUGCAGCCGAGUUUUCUCAUUCGGGGAA 900 Query 128 AUGG 131 || | Sbjct 901 AUCG 904 >> URS0000E72CDB_96440 Salvator merianae (Argentine black and white tegu) lncRNA (ENSSMRG00000021866.1) E-value: 7.4e+1 Identity: 64.38% Query coverage: 32.13% Gaps: 12.33% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 | | ||| ||||||||||| ||| ||| | | |||||| ||||||| | || | | ||| || Sbjct 484 GAAUUCCCACUACCACAAAUNAUGCAGUCGAGUUUCCCACAUUUGGGGAA-------AUCACAGGGGUCAGCA 549 >> URS00023A2EB1_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC003779) E-value: 7.5e+1 Identity: 73.33% Query coverage: 27.15% Gaps: 1.67% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG 123 |||| | || ||| | | |||| |||| || ||||||||| |||| | || ||||| | Sbjct 63100 GGGGGCACGUGAAUGAAUGCCCCUUCUAUCAGAAAUUAUGAAAUCCAUU-UCACACUUAG 63158 >> URS00002BC1B2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.2e+1 Identity: 65.85% Query coverage: 36.20% Gaps: 2.44% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG 159 || |||| ||||||||||| ||| ||| | | || || ||||||| || || || | | | ||||||||| Sbjct 21 GUCCCCCUACUACCACAAAUAAUGCAGUCAAGUUUCUAGCAUUUGGGGAAAUCACAAGGGUCAGCACACCCAGAGUGCAAUG 102 >> URS00004A6080_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.5e+1 Identity: 53.16% Query coverage: 63.35% Gaps: 19.62% Alignment: Query 75 AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA-------AGUGCAA 157 ||| |||| ||||||||||||||| ||| | | ||| | | || || || | | | ||| || ||||||| Sbjct 15 AACAUAGUCCCCUACUACCACAAAUUAUGCAGUCAAGUUUCCUGCCUUUGGGGAC----AAUUACAGGGGUCAGCACAAUCAUAGUGCAA 100 Query 158 UGUGAGCCAUUGAUGUAGGCCA----CGG-------CCCUUCUUGAUCGGCCGUCGACCCCGUCCAGG 214 || ||| || | | || ||||| ||||| | |||| ||||| Sbjct 101 UG---------GAUUAAGCCUAACCCUGGAAAAACCACCUUCGUGAUCAUGGGCUCUCCCCUGCCAGG 159 >> URS0000119A44_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 8.9e+1 Identity: 60.32% Query coverage: 55.20% Gaps: 5.56% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG-- 159 |||||| | | ||| |||||||||| ||| | | ||| || ||||||| || | | || | | ||||||||| Sbjct 10 GAACGC--AGUCAUGCUAUUACAAAUUAUGCAGUCAAGUUUCCUGCAUUUGGGGAAAUUGCAGGGGUCUGCACAUCCAGAGUGCAAUGGA 97 Query 160 UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG 195 | || | | | | || | ||||||||||| Sbjct 98 UAAG-CCUCGCCCUGGGAAAACCACCUUCUUGAUCA 132 >> URS0001957515_158456 Betta splendens (Siamese fighting fish) lncRNA (ENSBSLG00000001672.1) E-value: 9.7e+1 Identity: 69.23% Query coverage: 28.96% Gaps: 1.54% Alignment: Query 42 UUUUAAAUUUAGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGAC 105 |||| || | ||| |||||| |||||||||| ||||| |||||| |||||||| Sbjct 786 UUUUCUUUUGAACACAUUAUCAGGGGAGAGCGCGAACGCAGUCCCCCACUACCAGAAAUUAUGCA 850 >> URS00027E8D5D_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034700.1) E-value: 9.7e+1 Identity: 55.56% Query coverage: 73.76% Gaps: 11.11% Alignment: Query 18 UGUAAGUAAACAA--GAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUA 101 |||||| || || | | | || ||| | | ||| | ||| ||||| | || | || ||||||||| Sbjct 22763 UGUAAGCAAGCACAUGUGAGUGGAACUUUGAGACCAAGGGA------AGG----AUGCGAAUGUAGUCCUCUACUUUCACAAAUUA 22838 Query 102 UGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--ACCAACGCGCUCACCAAGUGCAAU--GUGAGCCAUUGAUGUAGGCCAC 180 || || | | ||| || || |||| || | || | || || |||||||| |||||||| | || || Sbjct 22839 UGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCA-GGAGUGCAAUAGAUGAGCCAUAGCCUGAGAAAAC 22922 >> URS0001CF23C2_1709941 fungal sp. partial internal transcribed spacer region E-value: 9.8e+1 Identity: 65.38% Query coverage: 34.84% Gaps: 2.56% Alignment: Query 6 UAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAA-AUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUA 82 || ||| | | ||| || ||| | || | | ||| ||| ||| ||||| | |||| |||||||||||| Sbjct 7 UAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUAAAAAAUUAAUGAAUUGUC-GGGGGCGCGCGAACGCGCG 83 >> URS000005C81E_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1e+2 Identity: 60.82% Query coverage: 39.82% Gaps: 16.49% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCA-------CCAAGUG 154 ||| | | ||| || |||||||||||| || || | |||| | |||| | |||||| | | ||| ||| || Sbjct 12 GAAUGUAGUCACCCACUGCCACAAAUUAUGCAGUUCAGUUUCCCUAAUUUGG-------GAAAACCAUAGGGGUCAGCACAUCCCACAUG 94 Query 155 CAAUGUG 161 ||||| | Sbjct 95 CAAUGGG 101 >> URS0000376F46_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1e+2 Identity: 56.60% Query coverage: 67.42% Gaps: 10.69% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUG 161 | || ||| |||| ||||||||||||||| || | | || ||| | | ||| || || | | ||| || | || || Sbjct 9 GUGAGCGCAGUUCCCCACUACCACAAAUUAUGCAGUUGAGUUUCUCACAUUUGUAGA-----AAUCACAGGGGUCAGCACAUCCAUAAUG 93 Query 162 AGCCAUUGAUGUAGGCCAC---GG-------CCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | || ||| |||| || ||| ||||| |||| ||||||||||| Sbjct 94 AA--AUGGAUAAGCUCCACCCUGGGAAAACCACCUCUGUGAUCAUGGUAUCUCCCCUACCAGGUAAGUA 160 >> URS0000E88497_10103 Mus spicilegus (steppe mouse) lncRNA (ENSMSIG00000010641.1) E-value: 1e+2 Identity: 56.52% Query coverage: 60.63% Gaps: 5.07% Alignment: Query 87 CUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAAC--CAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUGAUG 172 ||||||||||||||| | ||| ||| | | |||| | | | ||| | ||||||||| |||||| Sbjct 526 UGCUACCACAAAUUAUGCAGCUGACUUUCCUGCCUUUGGAGGAGUCACAGGUUAACAUA--CCUACAGUGCAAUGGAUGAGCCUCAC-CU 612 Query 173 UAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | || | || || || || | |||| ||||||||||| Sbjct 613 UGGGAAAAUCACCCUCAUGGUCAUGAGAUCUCCCCUGCCAGGUAAGUA 660 >> URS000241DAFF_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC016724) E-value: 2.7e-38 Identity: 81.31% Query coverage: 96.83% Gaps: 6.07% Alignment: Query 8 UCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCA 94 || |||||| |||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||| Sbjct 28735 UCUCAGGGCC-------------CAGGGACCAAAAUUUAAUUCUUUAAAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCA 28808 Query 95 CAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACG 181 ||||||||||||||||||||||| |||||||||||||||| ||| ||| | | |||||||||||| | |||| ||| ||||||||| Sbjct 28809 CAAAUUAUGACGUCCACUCUCCCUCUUGGGGAGAUGGUAAGCCAGCGCACCCGCCAAGUGCAAUGCGGGCCACUGACCUAGGCCACG 28895 Query 182 GCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | ||||| ||| | | ||||||||||||||||||||||| Sbjct 28896 GGCCUUCAUGACCACCUGUCGACCCCGUCCAGGUAAGUAU 28935 >> URS0000097C92_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e+2 Identity: 60.33% Query coverage: 52.94% Gaps: 4.13% Alignment: Query 77 CGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGG-AGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGA 162 || || || ||||||||||||||| ||| | ||||| |||||| | |||| || || | | || || || | | Sbjct 17 UGCAGACACCUGCUACCACAAAUUAUGCAGUCAUGUUUCCCAAAUUGGGGAAAAUGGCAAGGGUCAGCACAUUCAGAGCUCAGUGGAUAA 106 Query 163 GCCAUUGAUGUAGGCCACGGCCCUUCUUGAU 193 | | ||| ||| | ||||| |||| Sbjct 107 G-CCUUGCCCCAGGAAAACCACCUUCGUGAU 136 >> URS00002458D6_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e+2 Identity: 63.64% Query coverage: 33.94% Gaps: 11.69% Alignment: Query 82 ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 |||| ||||||||||||||| ||| | | ||| || ||||||| || | | |||||| | || Sbjct 22 UCCCCUACUACCACAAAUUAUGCAGUCAAGUUUCCUGCAUUUGGGGAAAUCUCA-------GGAGUCACCACAUCCA 91 >> URS000051777C_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e+2 Identity: 64.00% Query coverage: 33.03% Gaps: 2.67% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAAC 136 ||| | ||| |||| | ||||| | | |||||||||| ||| | | ||| | |||| || || | | Sbjct 4 GGGACAGCGUGAACACAGUCCCCCACACCUACAAAUUAUGCAGUCGAGUUUCCUGAAUUUGGAGAAAUCGCAGGG 78 >> URS0000D581B9_9606 Homo sapiens (human) non-protein coding lnc-ABCG2-3:4 E-value: 1.2e+2 Identity: 54.05% Query coverage: 62.44% Gaps: 10.14% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU---- 160 ||| || | ||||||||||||| | || | | |||||| | ||||| || || | | ||| ||||| || Sbjct 643 GAAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGA-----AAUCACAGGGAUCAGCAAGUCUUCAGUGGAA 728 Query 161 ----GAGCCAUUGAUGUAGGCC--ACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCC 211 || | ||| |||| || ||||| | | | || |||| | | Sbjct 729 UAGAGAAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUGCCU 785 >> URS0000E93004_9606 Homo sapiens (human) HSALNT0074769 E-value: 1.2e+2 Identity: 54.05% Query coverage: 62.44% Gaps: 10.14% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU---- 160 ||| || | ||||||||||||| | || | | |||||| | ||||| || || | | ||| ||||| || Sbjct 771 GAAUGCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGA-----AAUCACAGGGAUCAGCAAGUCUUCAGUGGAA 856 Query 161 ----GAGCCAUUGAUGUAGGCC--ACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCC 211 || | ||| |||| || ||||| | | | || |||| | | Sbjct 857 UAGAGAAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUGCCU 913 >> URS0002426F92_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC011490) E-value: 1.2e+2 Identity: 56.69% Query coverage: 47.51% Gaps: 23.62% Alignment: Query 73 CGAACGCGUACCCCCUCUACCACAAAUUAUGACG-------U-------CCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCA 147 |||| ||| | ||| ||||| ||| | | || | ||||| | ||||||||| || | || | || | Sbjct 2723 CGAAGGCGCAGCCC--------CAAAUAAUGGUGAAUGGUGUGAGUUCACCUCACUCCCCUUCGGGGAGAUGCGAAGCAAAUGGGCAUA 2803 Query 148 CCA-----AGUGCAAUGUGAG---CCAUUGAUGUAGGC 177 || | ||||| ||| ||||||||| |||| Sbjct 2804 GCAGCCGAUGACCAAUGGGAGGCUCCAUUGAUGCAGGC 2841 >> URS00027EF9F3_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034700.1) E-value: 1.2e+2 Identity: 55.03% Query coverage: 72.85% Gaps: 11.24% Alignment: Query 18 UGUAAGUAAACAA--GAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUA 101 |||||| || || | | | || ||| | | ||| | ||| ||||| | || | || ||||||||| Sbjct 22763 UGUAAGCAAGCACAUGUGAGUGGAACUUUGAGACCAAGGGA------AGG----AUGCGAAUGUAGUCCUCUACUUUCACAAAUUA 22838 Query 102 UGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--ACCAACGCGCUCACCAAGUGCAAU--GUGAGCCAUUGAUGUAGGCC 178 || || | | ||| || || |||| || | || | || || |||||||| |||||||| | || Sbjct 22839 UGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCA-GGAGUGCAAUAGAUGAGCCAUAGCCUGAGAAA 22920 >> URS0000D56ED7_9606 Homo sapiens (human) non-protein coding lnc-ABCG2-3:5 E-value: 1.3e+2 Identity: 52.82% Query coverage: 59.73% Gaps: 10.56% Alignment: Query 81 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU--------G 161 | ||||||||||||| | || | | |||||| | ||||| || || | | ||| ||||| || | Sbjct 2551 GUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGA-----AAUCACAGGGAUCAGCAAGUCUUCAGUGGAAUAGAG 2634 Query 162 AGCCAUUGAUGUAGGCC--ACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | | ||| |||| || ||||| | | | || |||| | | Sbjct 2635 AAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUGCCUG 2687 >> URS0000D58B9D_9606 Homo sapiens (human) non-protein coding lnc-ABCG2-3:2 E-value: 1.3e+2 Identity: 52.82% Query coverage: 59.73% Gaps: 10.56% Alignment: Query 81 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU--------G 161 | ||||||||||||| | || | | |||||| | ||||| || || | | ||| ||||| || | Sbjct 3236 GUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGA-----AAUCACAGGGAUCAGCAAGUCUUCAGUGGAAUAGAG 3319 Query 162 AGCCAUUGAUGUAGGCC--ACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | | ||| |||| || ||||| | | | || |||| | | Sbjct 3320 AAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUGCCUG 3372 >> URS0000D5DF5D_9606 Homo sapiens (human) non-protein coding lnc-ABCG2-3:3 E-value: 1.3e+2 Identity: 52.82% Query coverage: 59.73% Gaps: 10.56% Alignment: Query 81 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU--------G 161 | ||||||||||||| | || | | |||||| | ||||| || || | | ||| ||||| || | Sbjct 2905 GUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGA-----AAUCACAGGGAUCAGCAAGUCUUCAGUGGAAUAGAG 2988 Query 162 AGCCAUUGAUGUAGGCC--ACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | | ||| |||| || ||||| | | | || |||| | | Sbjct 2989 AAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUGCCUG 3041 >> URS0000E99A46_9606 Homo sapiens (human) HSALNT0074768 E-value: 1.3e+2 Identity: 52.82% Query coverage: 59.73% Gaps: 10.56% Alignment: Query 81 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU--------G 161 | ||||||||||||| | || | | |||||| | ||||| || || | | ||| ||||| || | Sbjct 4679 GUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGA-----AAUCACAGGGAUCAGCAAGUCUUCAGUGGAAUAGAG 4762 Query 162 AGCCAUUGAUGUAGGCC--ACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | | ||| |||| || ||||| | | | || |||| | | Sbjct 4763 AAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUGCCUG 4815 >> URS0000EB8DA1_9606 Homo sapiens (human) HSALNT0074770 E-value: 1.3e+2 Identity: 52.82% Query coverage: 59.73% Gaps: 10.56% Alignment: Query 81 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU--------G 161 | ||||||||||||| | || | | |||||| | ||||| || || | | ||| ||||| || | Sbjct 2679 GUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGA-----AAUCACAGGGAUCAGCAAGUCUUCAGUGGAAUAGAG 2762 Query 162 AGCCAUUGAUGUAGGCC--ACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | | ||| |||| || ||||| | | | || |||| | | Sbjct 2763 AAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUGCCUG 2815 >> URS000234884D_9606 Homo sapiens (human) HSALNT0320799 E-value: 1.3e+2 Identity: 52.82% Query coverage: 59.73% Gaps: 10.56% Alignment: Query 81 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU--------G 161 | ||||||||||||| | || | | |||||| | ||||| || || | | ||| ||||| || | Sbjct 1074 GUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGA-----AAUCACAGGGAUCAGCAAGUCUUCAGUGGAAUAGAG 1157 Query 162 AGCCAUUGAUGUAGGCC--ACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | | ||| |||| || ||||| | | | || |||| | | Sbjct 1158 AAGCCUUGCCCUAGGGAAAACUACCCUUGUGGUCAUGGUAUCUACCCUGCCUG 1210 >> URS00027F7ABC_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015035420.1) E-value: 1.3e+2 Identity: 55.73% Query coverage: 58.37% Gaps: 2.29% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUG 169 | | ||||||||||||||| | | ||| ||| | | ||||| | || | ||||||||| |||||| Sbjct 1238 CUCUACUACCACAAAUUAUGCAGCCGACUUUCCUGCAUUUGGAGAAAUCAUGGGUUAGCAUCCCUGGAGUGCAAUGGAUGAGCCUC-A 1324 Query 170 AUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 |||| | || || ||||| | |||| ||| Sbjct 1325 CCUUAGGAAAAUCACCCUCAUGAUCAUGAGAUCUCCCCUGCCA 1367 >> URS00027F8618_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015035420.1) E-value: 1.3e+2 Identity: 55.73% Query coverage: 58.37% Gaps: 2.29% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUG 169 | | ||||||||||||||| | | ||| ||| | | ||||| | || | ||||||||| |||||| Sbjct 2912 CUCUACUACCACAAAUUAUGCAGCCGACUUUCCUGCAUUUGGAGAAAUCAUGGGUUAGCAUCCCUGGAGUGCAAUGGAUGAGCCUC-A 2998 Query 170 AUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 |||| | || || ||||| | |||| ||| Sbjct 2999 CCUUAGGAAAAUCACCCUCAUGAUCAUGAGAUCUCCCCUGCCA 3041 >> URS00027FC3B3_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015035420.1) E-value: 1.3e+2 Identity: 55.73% Query coverage: 58.37% Gaps: 2.29% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUUG 169 | | ||||||||||||||| | | ||| ||| | | ||||| | || | ||||||||| |||||| Sbjct 1833 CUCUACUACCACAAAUUAUGCAGCCGACUUUCCUGCAUUUGGAGAAAUCAUGGGUUAGCAUCCCUGGAGUGCAAUGGAUGAGCCUC-A 1919 Query 170 AUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 |||| | || || ||||| | |||| ||| Sbjct 1920 CCUUAGGAAAAUCACCCUCAUGAUCAUGAGAUCUCCCCUGCCA 1962 >> URS00001BD0AE_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.4e+2 Identity: 70.97% Query coverage: 27.15% Gaps: 3.23% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACU--UGGGGAGAU 129 || | ||||| | ||| | ||||||||||| ||| | ||| ||||| ||||||| | Sbjct 10 GCACAAACGCUUUCCCUCACUACCACAAAUAAUGCAGAGGACUUUCCCAUAUCUGGGGAGGU 71 >> URS000054C26E_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.4e+2 Identity: 57.93% Query coverage: 64.71% Gaps: 6.21% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUG-A 162 |||| |||| ||| |||||||||||| |||| || ||| ||| | | || | | |||||||||| | | Sbjct 11 GAACAU--GUCCCCACUAACACAAAUUAUGAAGUCCCU----GCAUUUGAGGAAGUCUCAGGGGUCAGCACAUCCAAAGUGCAAUGGGUA 94 Query 163 GCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG-GCCGUCGACCCCGUCCAGGUA 216 | ||| | || | |||| ||| | | ||| |||| ||||||| Sbjct 95 AACCUUGCCCUGGGAAAACCACCUUUGUGACCAUGGUGUC-UCCCCUGCCAGGUA 148 >> URS00027F4989_9796 Equus caballus (horse) lncRNA (ENSECAG00000046291.1) E-value: 1.4e+2 Identity: 57.95% Query coverage: 38.91% Gaps: 10.23% Alignment: Query 68 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | | |||| | || || ||| ||| ||||||| ||| | | |||||| ||||| | || | | | ||| | | Sbjct 8 AAGUGAGAACACAGUCCGCCACUAUCACCAAUUAUGCAGUCAAGUUUCCCACAGUUGGGUAAAUCGCAGAGGUCAGCGUU-------U 88 >> URS000012B775_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.5e+2 Identity: 55.35% Query coverage: 67.42% Gaps: 11.32% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCA--AGUGCAA 157 | ||| | ||||| ||||||||||||| || | | |||||| || |||| || | | | ||| || || | Sbjct 12 ACAAACACAGUCCCCCACUACCACAAAUUACAGAGUUGAGUUUCCCACAUUUAGGGAAAUCGCAUG-------GGUCAGCACAUCUGGAG 94 Query 158 UGUGAGCCAUUGAUGUAGGCCACGG------CCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | || || | |||| || ||| | ||||| |||| ||||||||||| Sbjct 95 UUCGAUAGAUAAGUC-UGGCCCUGGAAAACCACCUCCAUGAUCAUGGCAUCUCCCCUGCCAGGUAAGUA 162 >> URS0000516F64_51031 Necator americanus U1 spliceosomal RNA E-value: 1.5e+2 Identity: 57.49% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAG-----A-UGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | || || | | ||| | || | ||| | || | Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUAACCUCAACUCGAGGCUGCCACACGGGUCAGCCCU-----UG 86 Query 147 ACCAAGUGCAAUGUGAG--CCA-UUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | || ||| || | || |||||||||||| | |||| |||||||||| Sbjct 87 CUAAAGUGCAAUGCAUGGGCCUCACCAUGGGGGUCCCG--CCUUCUUGAUCGCGAGAUCCCCCCAGCCAGGUAAGUU 161 >> URS0001DC5678_1709941 fungal sp. partial internal transcribed spacer region E-value: 1.5e+2 Identity: 64.56% Query coverage: 34.84% Gaps: 2.53% Alignment: Query 6 UAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAA-AUUUUAAAUUUAGGUAAUUGGCAGG-GGCCGCGCGAACGCGUA 82 || ||| | | ||| || ||| | || | | ||| ||| ||| ||||| | || || |||||||||||| Sbjct 7 UAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUAAAAAAUUAAUGAAUUGUCGGGGGGGCGCGCGAACGCGCG 85 >> URS00005F8127_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.6e+2 Identity: 65.71% Query coverage: 31.67% Gaps: 7.14% Alignment: Query 81 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||| || || ||| |||||||| ||| ||| |||||| | ||| | |||| | | ||| || Sbjct 19 GACCUCCACUGCCAUAAAUUAUGCAGUCGACUUUCCCACAUUU-----UGGGACACCAUAGGGUUCAGCA 83 >> URS00003E9CF3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.7e+2 Identity: 60.42% Query coverage: 61.99% Gaps: 6.94% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCC---ACUUGGGGAGAUGGUAAACCAACGCGCUCACCA-AGUGCAAUG--UGAGCCAU 167 |||| |||||||||||||||| | | | ||| | ||||||| || | ||||| || ||||||| | | |||| | Sbjct 25 CCCCACUACCACAAAUUAUGAAGCUGAGUUUCCUUGAAUUUGGGGAAAUCCCGGAGG--UCAGCUCAUCAGAGUGCAAAGGAUAAGCC-U 111 Query 168 UGAUGUAGGCCACG-GCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | | || | |||| ||||| | || | ||||||||||| Sbjct 112 CAACCUGGGAAAAACCACCUUUCUGAUCAUGGUACCUCCUCUGCCAGGUAAGUA 165 >> URS000242E1C2_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC002850) E-value: 1.8e+2 Identity: 62.63% Query coverage: 42.99% Gaps: 6.06% Alignment: Query 92 CCACAAAUUAUGACGUCCACU----CUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGU 173 | |||||| |||| | | | || || || || | |||||||||| |||| |||| ||| |||||||| ||| Sbjct 61854 CAACAAAUGAUGAGGACUUGUAGCACUAGCAAAUG-GGUAAGAGUAAACCAACC-UUGUACCAUCUGCACUGUAAGCCAUUGUUGU 61937 Query 174 AGGCCACGGCCCU 186 ||| | ||| Sbjct 61938 GCACCAGCGACCU 61950 >> URS00027E74E5_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034700.1) E-value: 1.8e+2 Identity: 57.32% Query coverage: 67.87% Gaps: 7.64% Alignment: Query 66 GGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--ACCAACGCGCUCA 147 | ||||| | || | || ||||||||||| || | | ||| || || |||| || | || | || || Sbjct 28367 G---AUGCGAAUGUAGUCCUCUACUUUCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCA 28449 Query 148 CCAAGUGCAAU--GUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG-GCCGUCGACCCCGUCCAGGU 215 |||||||| |||||||| | || || || ||| || || | |||| ||||||| Sbjct 28450 -GGAGUGCAAUAGAUGAGCCAUAGCCUGAGAAAACCACC-UUCAUGGUCAUGAUUAUUUCCCCUUCCAGGU 28518 >> URS0001A1DB6D_9606 Homo sapiens (human) X active specific transcript E-value: 1.9e+2 Identity: 55.92% Query coverage: 64.71% Gaps: 8.55% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA--AGUG 154 | | |||| | | || | |||| |||||||| || | | |||||| | || || || | | | | ||| || || Sbjct 13788 GAGUGAACACAGUUCACCACCACCAUAAAUUAUGCAAUCAAGUUUCCCACAUUUGGUGA----AAUCUCAGGGGGUCAGCACAUCUG 13870 Query 155 CAAUG-------UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 |||| |||||| | | | || | ||||| ||||| | ||||| || Sbjct 13871 GAAUGGAAUAGAUGAGCCUUGGCGCUGGGAGAACCACCUUCAUGAUCAUGGCACUACCCCUGACA 13935 >> URS00025C80F9_9606 Homo sapiens (human) non-coding RNA E-value: 1.9e+2 Identity: 55.92% Query coverage: 64.71% Gaps: 8.55% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA--AGUG 154 | | |||| | | || | |||| |||||||| || | | |||||| | || || || | | | | ||| || || Sbjct 13780 GAGUGAACACAGUUCACCACCACCAUAAAUUAUGCAAUCAAGUUUCCCACAUUUGGUGA----AAUCUCAGGGGGUCAGCACAUCUG 13862 Query 155 CAAUG-------UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 |||| |||||| | | | || | ||||| ||||| | ||||| || Sbjct 13863 GAAUGGAAUAGAUGAGCCUUGGCGCUGGGAGAACCACCUUCAUGAUCAUGGCACUACCCCUGACA 13927 >> URS0002397DE9_3827 Cicer arietinum (chickpea) long non-coding RNA (CARI_LNC000570) E-value: 1.9e+2 Identity: 57.81% Query coverage: 50.23% Gaps: 13.28% Alignment: Query 16 CCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAU---------UGGCAGGGGCCGCGCGAACGC-GUACC-CCCUCUA 91 ||| ||| | ||||| ||| ||| | ||||| ||| | |||||| |||| | | | | |||| ||| Sbjct 16828 UCUGAAAGAGAGGAAGAGAGACUAAACCUAUAAUUUUGGUUUUUUCUUGAGGUGGCAGCGGCCACCCCAUGUCCCUACCAAGCUCCG 16914 Query 92 CCACAAAUUAUGACGU------CCACUCUCCCACUUGGGGA 126 ||||| | ||| | | || || || ||||| ||| Sbjct 16915 CCACAGACUAUUAGUUGCGGUGCCGCUUUCGCACUUCUGGA 16955 >> URS00008356DC_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 2e+2 Identity: 58.08% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGAU-------GGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | || | || || || | || ||| | || ||| Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | | ||| || || |||| ||||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUUCCG--CCUUGUUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS00025FDEF8_1529436 Anneissia japonica (Sea lily) uncharacterized LOC117108854, transcript variant X3 E-value: 2.1e+2 Identity: 58.62% Query coverage: 38.01% Gaps: 3.45% Alignment: Query 124 GGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGG---CCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 || |||||| |||| | |||| | |||||||| || ||||| | || | | ||| | |||| |||| Sbjct 3560 UGAAAUGGUAGACCAGCACGCUUGCAAAGUGCAACAGAAGUGGUUGAUAUGCAACUCCUUGAAUUCUUGUGAACUGCCGCCGACUU 3645 Query 207 C 207 | Sbjct 3646 C 3646 >> URS00027ECF5D_9796 Equus caballus (horse) lncRNA (ENSECAG00000046291.1) E-value: 2.1e+2 Identity: 59.30% Query coverage: 38.01% Gaps: 10.47% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 | | |||| | || || ||| ||| ||||||| ||| | | |||||| ||||| | || | | | ||| | | Sbjct 7 GUGAGAACACAGUCCGCCACUAUCACCAAUUAUGCAGUCAAGUUUCCCACAGUUGGGUAAAUCGCAGAGGUCAGCGUU-------U 85 >> URS00002E7775_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.2e+2 Identity: 55.00% Query coverage: 68.33% Gaps: 10.00% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCA------- 150 | | ||| || ||||| ||| | |||||||| ||| | ||| | ||||||| || || | | ||| || Sbjct 8 GAGUGAAUGCAGUCCCCCAGUACUGCUAAUUAUGAUGUCAGGUUUCCUGAAUUUGGGGAAAU-------CACAGGGGUCAGCACAUUUGU 90 Query 151 AGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||||||| || || || | ||||| || || || | || |||||||| Sbjct 91 AGUGCAAUGGAUAAGCUUCAUCCUGGGAAAACACCUUCGUGUUCAUGGCAUCUCCUCAGCCUGGUAAGUA 160 >> URS00007E58BD_29170 Ancylostoma caninum (dog hookworm) U1 spliceosomal RNA E-value: 2.2e+2 Identity: 59.88% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAGA------UGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | || || | | ||| | || ||| | || |||||| Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUAACCUCAACUCGAGGCUGCCACACAGGUCAGCC--CGCGCU- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | | ||| || | || |||||||||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUCUUGAUCGCGAGAGCCCCCCAGCCAGGUAAGUU 161 >> URS00007E58BD_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 2.2e+2 Identity: 59.88% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAGA------UGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | || || | | ||| | || ||| | || |||||| Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUAACCUCAACUCGAGGCUGCCACACAGGUCAGCC--CGCGCU- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | | ||| || | || |||||||||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUCUUGAUCGCGAGAGCCCCCCAGCCAGGUAAGUU 161 >> URS00007E58BD_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 2.2e+2 Identity: 59.88% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAGA------UGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | || || | | ||| | || ||| | || |||||| Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUAACCUCAACUCGAGGCUGCCACACAGGUCAGCC--CGCGCU- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | | ||| || | || |||||||||||| | |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUCUUGAUCGCGAGAGCCCCCCAGCCAGGUAAGUU 161 >> URS00019C0219_506608 Cinara cedri non-coding RNA E-value: 2.2e+2 Identity: 58.92% Query coverage: 77.38% Gaps: 14.05% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC--UCUCCCACUUGGGGAGAU------- 129 | ||| ||| ||||| | |||||||||| | || ||| || ||||||| |||||| | ||| || |||| | Sbjct 98 UCAGGAAAU---CAGGGACGGCGCGAACGCAGUC-CCAGCUAACAAAAAUUAU-ACGUCCGAGAUAUCCACAUUAGGGAUACUCGCAGG 181 Query 130 GGUAAACCAACGCGCUCACCAAGUGCAAUGU---GAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCC--GUCCAG 213 || |||| | || | |||||||| || | || ||| || ||| ||||| | || ||| | |||| Sbjct 182 GG----UCAACCCAAUCUGUAUGUGCAAUGAUCAGAUCUCGCCUUGGAGGAACCG--CCUAAAUGAUCA-CGGUUUACCUCCACGCCAG 263 Query 214 GUAAGUA 220 ||||||| Sbjct 264 GUAAGUA 270 >> URS00023AD1A9_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC003912) E-value: 2.2e+2 Identity: 80.43% Query coverage: 20.36% Gaps: 2.17% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA 128 |||| | |||||||| ||||| || | | |||||||||||||| | Sbjct 157694 CCCCACAACCACAAAGUAUGAUGUUCUCUUCUCCCACUUGGGGGCA 157739 >> URS00023FFC7B_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC011047) E-value: 2.2e+2 Identity: 52.04% Query coverage: 84.16% Gaps: 17.35% Alignment: Query 19 GUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGG--UAAUUGGCAGGGGCCGCGCGAACGCGUACCC--CCUCUACCACAAAUUA 101 || | | |||||||| |||| || || || || | ||| | | | || ||| | || || Sbjct 16204 GUGAUCAGACAAGAGG-ACCAUGGAUUGAACUUCGGGGCGACUGG---------CUCCAUCGGGUAGACGUCCCUUAGUG------- 16273 Query 102 UGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCAC------GG 182 ||| ||||||| |||||| | |||| ||| | || || || || || |||| | ||| || | Sbjct 16274 -CACGCUUCCUCUCCCUCUUGGGUAUAUGGGU------UGCGUAAAUCAUGUUCACCGUCCGCACUUGAGGGAGGAAACCCUUCUGU 16353 Query 183 CCCUUCUUGAUCGGCCGUCGAC 204 || | ||| ||||| |||| Sbjct 16354 CCUCUAUUGUUCGGCGAUCGAG 16375 >> URS00002D2B58_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.4e+2 Identity: 56.59% Query coverage: 57.01% Gaps: 2.33% Alignment: Query 69 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 | | ||| | |||| ||||||||||||||| || | | | ||| ||||||| || | || | | |||| Sbjct 8 AGUGUCAACACAGUUCCCCACUACCACAAAUUAUGCACUCAAGUUUUCCAGCUUUGGGGAUAUCUCAGGGUUCAGCACAUCUGACAUGCA 97 Query 157 AUGUG-AGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 ||| | | ||| | ||| | |||| ||||| Sbjct 98 AUGGAUAAGCCUUGCCCUGGGCUAAACACCUUUGUGAUC 136 >> URS0002579EFC_9606 Homo sapiens (human) ncRNA E-value: 2.6e+2 Identity: 56.16% Query coverage: 61.99% Gaps: 8.90% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA--AGUG 154 | | |||| | | || | |||| |||||||| || | | |||||| | || || || | | | | ||| || || Sbjct 13760 GAGUGAACACAGUUCACCACCACCAUAAAUUAUGCAAUCAAGUUUCCCACAUUUGGUGA----AAUCUCAGGGGGUCAGCACAUCUG 13842 Query 155 CAAUG-------UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 |||| |||||| | | | || | ||||| ||||| | |||| Sbjct 13843 GAAUGGAAUAGAUGAGCCUUGGCGCUGGGAGAACCACCUUCAUGAUCAUGGCACUACCC 13901 >> URS00008299C4_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 2.7e+2 Identity: 58.08% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGAU-------GGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | || | || || || | || ||| | || ||| Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | | ||| || | || |||| ||||||| | || | || |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUGUUGAUCGCGAGACGCCUCCAGCCAGGUAAGUU 161 >> URS0000048044_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3e+2 Identity: 55.26% Query coverage: 65.16% Gaps: 17.11% Alignment: Query 76 ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA-------AGUGCAAU 158 | | |||| |||||||||||||| || | | |||||| | || | ||| | | | ||| | |||||||| Sbjct 16 AUGUAGUCCCCUACUACCACAAAUUAUAUAGUUGAGUUUCCCACAUUUGG-----GAAAAUAACAGGGGUCAGUACAUCCAGAGUGCAAU 100 Query 159 GUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCG-GCCGUCGACCCCGUCCAGGUAAGU 219 | | || ||| |||| | ||||| | || ||| |||| ||||| Sbjct 101 G----------AA-UAAGCCUU-GCCCAUUGUGAUCAUGAUAUCUG-CCCUGCCAGCUAAGU 149 >> URS00005A8181_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3e+2 Identity: 60.47% Query coverage: 38.46% Gaps: 1.16% Alignment: Query 77 CGCGUACCCCCUCUACCACAAAUUAUGACGUCCA-CUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUG 161 | | ||||| ||||||| ||||||| | || | || ||||||| || | | | | | | ||||||||| | Sbjct 15 CACAGUCCCCCACUACCACGUAUUAUGAAUUGAGUUUCCCACAUUUGGGGAAAUCGCAGAGGUCAGGACAUCCAGAGUGCAAUGGG 100 >> URS000043C565_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.2e+2 Identity: 63.75% Query coverage: 35.29% Gaps: 2.50% Alignment: Query 81 UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAU 158 ||||| |||||| ||||||| ||| ||| ||||| ||||||| || | | || | |||||||| Sbjct 20 CCCCCCCACUACCAAAAAUUAUAUAGUCAACUUUCCCAUGUUUGGGGAAAUCACCAGGGACAGCACAUUGGGAGUGCAAU 99 >> URS00004FB451_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.2e+2 Identity: 56.52% Query coverage: 67.87% Gaps: 7.45% Alignment: Query 71 CGCGAACGCGUA--CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 || || || | ||| | ||||||||| ||| | | | |||| | |||||| ||| | | || | | |||||| Sbjct 9 CGUGAGUGCAGUCCCUCCCACCACCACAAAUCAUGCAGCUGAGUUUCCCGAAUUUGGGGGGAUCGCAGGGGUCUGCACAUCCGGAGUGCA 98 Query 157 AUGUG----AGCCAUUGAUGUAGGCCACG-GCCCUUCUUGAUC--GGCCGUCGACCCCGUCCAGGUAAGUA 220 || | |||| | | | || | ||||| ||||| || | || ||||||||||| Sbjct 99 AUAAGGAUAAGCC-UCGCCCUGGGAAAAACCACCUUCAUGAUCAUGGUACCUCUCUCCUGCCAGGUAAGUA 168 >> URS0000815D40_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 3.3e+2 Identity: 57.49% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGAU-------GGUAAACCAACGCGCUC 146 | ||||||||||||| |||| | || ||||| | || | || || || | || ||| | || ||| Sbjct 4 GAGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | | ||| || || |||| ||||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUUCCG--CCUUGUUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS0000826D4C_29170 Ancylostoma caninum (dog hookworm) U1 spliceosomal RNA E-value: 3.5e+2 Identity: 57.49% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAGA------UGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | || || | | ||| | || ||| | || ||| Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUAACCUCAACUCGAGGCUGCCACACAGGUCAGCCUGUGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | ||| ||| | || |||||||||||| | ||| |||||||||| Sbjct 89 --AAAGUGCAAUGCACGGGCCUCACCAUGGAGGUCCCG--CCUUCUUGAUCGCGAGAGCCUCCCAGCCAGGUAAGUU 161 >> URS0000826D4C_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 3.5e+2 Identity: 57.49% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAGA------UGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | || || | | ||| | || ||| | || ||| Sbjct 4 GGGCCGCGCGAACGCA--GCCCCACACGCAAAAAUUUAGCUGUUGGCUAACCUCAACUCGAGGCUGCCACACAGGUCAGCCUGUGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | ||| ||| | || |||||||||||| | ||| |||||||||| Sbjct 89 --AAAGUGCAAUGCACGGGCCUCACCAUGGAGGUCCCG--CCUUCUUGAUCGCGAGAGCCUCCCAGCCAGGUAAGUU 161 >> URS0001C9AA02_1709941 fungal sp. partial internal transcribed spacer region E-value: 3.5e+2 Identity: 62.82% Query coverage: 34.84% Gaps: 2.56% Alignment: Query 6 UAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAA-UUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUA 82 || ||| | | ||| || ||| | || | | || | | ||| ||||| | |||| |||||||||||| Sbjct 7 UAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUAAACAAUUAAUGAAUUGUC-GGGGGCGCGCGAACGCGCG 83 >> URS00023A7826_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006392) E-value: 3.7e+2 Identity: 66.67% Query coverage: 28.51% Gaps: 0.00% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAA 134 ||||| | |||| | ||| |||||||||| || | || || |||| | | ||| || Sbjct 10169 GCGAAUGGAAACCCUCGCUAUCACAAAUUAUUACAUAGACCCUGCCACGUAGACAGACCUUAG 10231 >> URS00023EBBA6_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006392) E-value: 3.7e+2 Identity: 66.67% Query coverage: 28.51% Gaps: 0.00% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAA 134 ||||| | |||| | ||| |||||||||| || | || || |||| | | ||| || Sbjct 10169 GCGAAUGGAAACCCUCGCUAUCACAAAUUAUUACAUAGACCCUGCCACGUAGACAGACCUUAG 10231 >> URS000240F549_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006391) E-value: 3.7e+2 Identity: 66.67% Query coverage: 28.51% Gaps: 0.00% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAA 134 ||||| | |||| | ||| |||||||||| || | || || |||| | | ||| || Sbjct 10704 GCGAAUGGAAACCCUCGCUAUCACAAAUUAUUACAUAGACCCUGCCACGUAGACAGACCUUAG 10766 >> URS00027EFA1E_9796 Equus caballus (horse) lncRNA (ENSECAG00000056859.1) E-value: 3.7e+2 Identity: 56.83% Query coverage: 61.54% Gaps: 2.16% Alignment: Query 59 UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACC 149 || | ||| || |||| | | |||||| | ||||||| ||| ||| | ||| | || | || | | | || || | Sbjct 139 UGCCGGGGAGAGCAGGAACACAGAUCCCCUCCAGCACAAAUCAUGCAGUCAAGAUUCCUGCAUGCAGCCAUACUGCAGUGAUCAGCACAUC 229 Query 150 --AAGUGCAAUGUGAGCCAUUGAUGUAGG-CCACGGCCCUUCUUGAUC 194 ||||||||| | | | || | |||||||||||| Sbjct 230 CAGAGUGCAAUGCACAAGUCUCACGCCGGGAAAAUCCCCUUCUUGAUC 277 >> URS00023F6F2A_3708 Brassica napus (rape) long non-coding RNA (BNAP_LNC018653) E-value: 6.6e-4 Identity: 66.67% Query coverage: 50.23% Gaps: 2.63% Alignment: Query 110 ACUCUCCCACUUGGGGAGAUGGUAAACCAA---CGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAU 193 |||| ||||||||| ||| ||| | || | | || | |||||||| || || | |||| ||| |||| ||| Sbjct 54259 GCUCUUCCACUUGGGAAGACCUUAAGCUAAACACCCUUUCUUAAUGUGCAAUGGAAGUCACUAGCUUAGGGCACUCAUCUUCAAGAU 54345 Query 194 CGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||||||||| ||||||| Sbjct 54346 CAAGAGUCGACCCCGUCCAUGUAAGUA 54372 >> URS0000059417_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.8e+2 Identity: 56.64% Query coverage: 61.99% Gaps: 9.79% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA------AGUGCAAUGUGAGCCAU 167 |||| |||||||||| | || | | | | || ||| | ||| ||| || | | ||| || ||||||||| | Sbjct 9 CCCCACUACCACAAACUGUGUAGGCAAGUUUCUCACAUU------UGGGAAAUCACAGGGGUCAGCACAUCGGAGUGCAAUGGAUAAGCU 92 Query 168 UGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || | | |||| ||||| | | |||| |||| |||||| Sbjct 93 UGUCUUGGAAAUACCACCUUUGUGAUCA--UGGUGUCCCCUGCCAGAUAAGUA 143 >> URS00005602E6_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.9e+2 Identity: 67.74% Query coverage: 27.15% Gaps: 3.23% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUA 133 || | | ||||| ||||||||||||||| || | | ||| | ||||| | || | | Sbjct 14 GACCACAGUCCCCCACUACCACAAAUUAUGUAGUUGAAUUUCCUGUAUUUGGGAAAAUCGCA 75 >> URS0000D5707D_9606 Homo sapiens (human) non-protein coding lnc-ZNF843-2:6 E-value: 4e+2 Identity: 54.43% Query coverage: 71.04% Gaps: 5.70% Alignment: Query 13 GGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAA 98 | | || ||| | |||| | | | | | | ||| ||| ||| ||| | || | || | ||| |||| ||| Sbjct 10476 GAGUAGGUUAGUUAUCAAGGGAGUGGACAGCUGA----UAGAUAAAUGGAUGGGUUCUGCCCCCACCCACCCCCUCUCUUGCACUGU 10558 Query 99 UUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUG 169 | | ||| || || |||| || | || || || ||||||| |||| ||| ||| Sbjct 10559 CUUGCCCUUCCGCUUUCUGCUGUGGGAUGAGGCAGAAAGAAGGCCCUCACCAGAUGCAG----GGCCCUUG 10625 >> URS0002338EEA_9606 Homo sapiens (human) HSALNT0385372 E-value: 4e+2 Identity: 54.43% Query coverage: 71.04% Gaps: 5.70% Alignment: Query 13 GGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGG-CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAU 102 | | || ||| | |||| | | | | | | ||| ||| ||| ||| | || | || | ||| |||| ||| | Sbjct 705 GAGUAGGUUAGUUAUCAAGGGAGUGGACAGCUGA----UAGAUAAAUGGAUGGGUUCUGCCCCCACCCACCCCCUCUCUUGCACUGUCUUG 791 Query 103 GACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUG 169 | ||| || || |||| || | || || || ||||||| |||| ||| ||| Sbjct 792 CCCUUCCGCUUUCUGCUGUGGGAUGAGGCAGAAAGAAGGCCCUCACCAGAUGCAG----GGCCCUUG 854 >> URS00023E43B0_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC004860) E-value: 2.3e+1 Identity: 67.57% Query coverage: 33.48% Gaps: 1.35% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACC 137 || | | || ||| | | |||| | || || ||| ||| | |||| || ||||||||||||| || | | Sbjct 26454 GGAGGCACGUGAAUGAAUGCCCCUUUUAUCAGAAAAUAUUAAAUCCAU-UUCACACUUGGGGAGAUAGUUGAUC 26526 >> URS00023EE17F_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC004860) E-value: 2.3e+1 Identity: 67.57% Query coverage: 33.48% Gaps: 1.35% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACC 137 || | | || ||| | | |||| | || || ||| ||| | |||| || ||||||||||||| || | | Sbjct 26452 GGAGGCACGUGAAUGAAUGCCCCUUUUAUCAGAAAAUAUUAAAUCCAU-UUCACACUUGGGGAGAUAGUUGAUC 26524 >> URS000241F566_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC004860) E-value: 2.3e+1 Identity: 67.57% Query coverage: 33.48% Gaps: 1.35% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACC 137 || | | || ||| | | |||| | || || ||| ||| | |||| || ||||||||||||| || | | Sbjct 26453 GGAGGCACGUGAAUGAAUGCCCCUUUUAUCAGAAAAUAUUAAAUCCAU-UUCACACUUGGGGAGAUAGUUGAUC 26525 >> URS000238F666_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC007557) E-value: 4.2e+2 Identity: 56.30% Query coverage: 58.37% Gaps: 11.11% Alignment: Query 61 GCAGGGGCCGCGCGAACGCGUACCCCCUCUACC-ACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCAC 148 || || | | | || ||| ||||||||||| || || | || |||||||| ||| ||| | | | | | || || Sbjct 7518 GCCGGCUCGGAGAAAAGGCGCUCCCCCUCUACCGACUCAUGAAGAAGUCCACUCA----CUUUGGGUG---GA--AUGACCAGGCGGAC 7597 Query 149 CAAGUGCAAUGUGAGCC---AUUGAUGUAGGCCACG--GCCCUUCU 189 |||| ||| ||||| | |||| ||| ||| Sbjct 7598 CAAGCUUUCCACGAGUUGAAGAAGAUGUUGUCCACCCCGCCUGUCU 7643 >> URS00021979E9_158383 Olea europaea subsp. europaea non-coding RNA E-value: 4.3e+2 Identity: 72.22% Query coverage: 23.98% Gaps: 1.85% Alignment: Query 98 AUUAUGACGUCCACUCUCCCACUUG-GGGAGAUGGUAAACCAACGCGCUCACCA 150 || |||| |||||||||| |||| ||| |||| |||| || | ||||| Sbjct 1478 UUUUUGACAUCCACUCUCCAUCUUGCGGGGGAUGUUAAAACACCAAGCUCAAUU 1531 >> URS0000D40C5C_9598 Pan troglodytes (chimpanzee) retained intron E-value: 4.4e+2 Identity: 54.55% Query coverage: 44.80% Gaps: 10.00% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU-----------CCACUCUCCCACUUGGGGAGAUGGUAAACCAACG 141 || |||||||| ||||| || | || ||||| | | | || | | | | || | ||||| | ||||| Sbjct 302 CAAGGGCCGCGGGAACGAGUGCGUCCAGUACCAGCAUGUGUUACAUAGAAAUCUCAUUUAUUUGGCUACCAUUGCAGAUGCCAGUCCAACC 392 Query 142 CGCUCACCAAGUGCAAUGU 160 || | ||| |||||| Sbjct 393 AGCACUUCAAAAGCAAUGG 411 >> URS0002135BF9_3818 Arachis hypogaea bacterial LSU rRNA E-value: 4.5e+2 Identity: 62.67% Query coverage: 31.22% Gaps: 8.00% Alignment: Query 34 GGACCAAAUUUUAAAUUUAGGUAAUUG------GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAU 102 ||| | ||| ||| | |||| | | | ||||| |||| || |||| | ||| | ||||| |||| Sbjct 713 GGAUGACAUUGUAAUCUCAGGUUACUCGUUAGAGUAGGGGUCGCGAGAGAGCGUUCUCCCAUUUCCACACCUUAU 787 >> URS00021783B4_3818 Arachis hypogaea bacterial LSU rRNA E-value: 4.5e+2 Identity: 62.67% Query coverage: 31.22% Gaps: 8.00% Alignment: Query 34 GGACCAAAUUUUAAAUUUAGGUAAUUG------GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAU 102 ||| | ||| ||| | |||| | | | ||||| |||| || |||| | ||| | ||||| |||| Sbjct 737 GGAUGACAUUGUAAUCUCAGGUUACUCGUUAGAGUAGGGGUCGCGAGAGAGCGUUCUCCCAUUUCCACACCUUAU 811 >> URS0002377DD9_3067 Volvox carteri (V. carteri) long non-coding RNA (VCAR_LNC003218) E-value: 4.6e+2 Identity: 68.75% Query coverage: 28.05% Gaps: 4.69% Alignment: Query 131 GUAAACCAACGCGCUCACCAAGUGCAAUGU--GAGCCAUUGAUGUAGGCCACGGCCCUUCUUGA 192 ||||| ||||| | | ||||||| || | | |||||| ||| | ||| ||||| ||| Sbjct 24192 GUAAAGCAACGU-CGUGCAAAGUGCAGCGUACGUGACAUUGACGUACGUCACAGCCCUCCUUCU 24254 >> URS000213FBED_3818 Arachis hypogaea bacterial LSU rRNA E-value: 4.7e+2 Identity: 62.67% Query coverage: 31.22% Gaps: 8.00% Alignment: Query 34 GGACCAAAUUUUAAAUUUAGGUAAUUG------GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAU 102 ||| | ||| ||| | |||| | | | ||||| |||| || |||| | ||| | ||||| |||| Sbjct 713 GGAUGACAUUGUAAUCUCAGGUUACUCGUUAGAGUAGGGGUCGCGAGAGAGCGUUCUCCCAUUUCCACACCUUAU 787 >> URS00021603A4_3818 Arachis hypogaea bacterial LSU rRNA E-value: 4.7e+2 Identity: 62.67% Query coverage: 31.22% Gaps: 8.00% Alignment: Query 34 GGACCAAAUUUUAAAUUUAGGUAAUUG------GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAU 102 ||| | ||| ||| | |||| | | | ||||| |||| || |||| | ||| | ||||| |||| Sbjct 713 GGAUGACAUUGUAAUCUCAGGUUACUCGUUAGAGUAGGGGUCGCGAGAGAGCGUUCUCCCAUUUCCACACCUUAU 787 >> URS0002176D70_3818 Arachis hypogaea bacterial LSU rRNA E-value: 4.7e+2 Identity: 62.67% Query coverage: 31.22% Gaps: 8.00% Alignment: Query 34 GGACCAAAUUUUAAAUUUAGGUAAUUG------GCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAU 102 ||| | ||| ||| | |||| | | | ||||| |||| || |||| | ||| | ||||| |||| Sbjct 712 GGAUGACAUUGUAAUCUCAGGUUACUCGUUAGAGUAGGGGUCGCGAGAGAGCGUUCUCCCAUUUCCACACCUUAU 786 >> URS000058B2A7_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.8e+2 Identity: 57.45% Query coverage: 62.44% Gaps: 7.80% Alignment: Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG--GGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG-UGAGCCAUUG 169 |||| |||||||||||||| || | | |||||| | | ||| || || | | || | | ||||| || | | Sbjct 23 CCCCUCAUACCACAAAUUAUGCAGUUGAGUUUCCCACAUUGUGGGAAAUUGUCA-------GGAUCC-AGAAUCCAAUGACUAGGCCUCA 104 Query 170 AUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||| | | || ||||| |||| ||||||||||| Sbjct 105 CUCUAGGAAAGCUGCUUUUGUGAUCAUAUUAUCUCCCCUGCCAGGUAAGUA 155 >> URS0000D37AB4_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 4.8e+2 Identity: 54.55% Query coverage: 44.80% Gaps: 10.00% Alignment: Query 62 CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU-----------CCACUCUCCCACUUGGGGAGAUGGUAAACCAACG 141 || |||||||| ||||| || | || ||||| | | | || | | | | || | ||||| | ||||| Sbjct 304 CAAGGGCCGCGGGAACGAGUGCGUCCAGUACCAGCAUGUGUUACAUAGAAAUCUCAUUUAUUUGGCUACCAUUGCAGAUGCCAGUCCAACC 394 Query 142 CGCUCACCAAGUGCAAUGU 160 || | ||| |||||| Sbjct 395 AGCACUUCAAAAGCAAUGG 413 >> URS0002373F83_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC000686) E-value: 4.8e+2 Identity: 50.75% Query coverage: 60.63% Gaps: 21.64% Alignment: Query 11 AAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAA 97 |||| ||| ||| | |||| |||| |||| ||||| || | | | || ||| Sbjct 17011 AAGGUCCUUUAA-------AUAGGGUGCAAACCCUAAAAUUAGGGUUUUC----------------------UCUUCCCAACACCAA 17068 Query 98 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGC 144 || | ||||| || || ||| || ||| |||| | ||| || Sbjct 17069 CUUGUCGAGUCCAGUCGCCGACUCGGCGAGUUGGUCACUUAACACGU 17115 >> URS00023D5319_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC000684) E-value: 4.8e+2 Identity: 50.75% Query coverage: 60.63% Gaps: 21.64% Alignment: Query 11 AAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCAC 95 |||| ||| ||| | |||| |||| |||| ||||| || | | | || | Sbjct 417221 AAGGUCCUUUAA-------AUAGGGUGCAAACCCUAAAAUUAGGGUUUUC----------------------UCUUCCCAACACC 417276 Query 96 AAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGC 144 || || | ||||| || || ||| || ||| |||| | ||| || Sbjct 417277 AACUUGUCGAGUCCAGUCGCCGACUCGGCGAGUUGGUCACUUAACACGU 417325 >> URS00023DFFE3_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC000679) E-value: 4.8e+2 Identity: 50.75% Query coverage: 60.63% Gaps: 21.64% Alignment: Query 11 AAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCAC 95 |||| ||| ||| | |||| |||| |||| ||||| || | | | || | Sbjct 417155 AAGGUCCUUUAA-------AUAGGGUGCAAACCCUAAAAUUAGGGUUUUC----------------------UCUUCCCAACACC 417210 Query 96 AAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGC 144 || || | ||||| || || ||| || ||| |||| | ||| || Sbjct 417211 AACUUGUCGAGUCCAGUCGCCGACUCGGCGAGUUGGUCACUUAACACGU 417259 >> URS0000515488_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.9e+2 Identity: 70.37% Query coverage: 23.53% Gaps: 3.70% Alignment: Query 79 CGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUG 130 | ||||| || |||||||| ||| || | | |||||| ||||||| || Sbjct 17 CAGUCCCCCACUUCCACAAAUGAUGUAGUUGAGUUUCCCACAUUUGGGGAAAUC 70 >> URS000240F20C_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC004748) E-value: 4.9e+2 Identity: 60.75% Query coverage: 48.42% Gaps: 13.08% Alignment: Query 16 CCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGA 104 || || |||||| | | ||| ||||||| | | |||||| | ||| ||| |||| ||| | || ||||| Sbjct 9436 CCAAAAAAUAAACAUAAUGAACCCAAUUUUA--UGCACUUAAUUGACGGGGA-CGC-----------UACCCUUUACUAUGAACUAUGA 9510 Query 105 CGUCCACUCUCCCACUUG 122 ||| ||| ||||||| Sbjct 9511 CGUAAGCUCAACCACUUG 9528 >> URS000242DAC7_3694 Populus trichocarpa (black cottonwood) long non-coding RNA (PTRI_LNC003103) E-value: 4.9e+2 Identity: 57.41% Query coverage: 43.44% Gaps: 16.67% Alignment: Query 40 AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUA------CCACAAAUUAUGACGUCCACUCUCCC- 117 ||||||||| || |||||| || || || |||| |||||| | | || ||||| | | | || | Sbjct 125958 AAUUUUAAA------AUGUUUGCAGGGCUCGGGCCCCUGCUUACCUCCUCUAGUUCCGGCCCUGAUCAUGACCACAAAUAUCACC 126036 Query 118 -----ACUUGGGGAGAUGGUAAA 135 | || ||||||||| || Sbjct 126037 GCGAUAGCUGAGGAGAUGGUGAA 126059 >> URS000081A915_29170 Ancylostoma caninum (dog hookworm) U1 spliceosomal RNA E-value: 5e+2 Identity: 58.08% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | +||+ | ||+|| || | || ||| | || ||| Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACAGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | |+ ||| ||+| || |||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS000081A915_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 5e+2 Identity: 58.08% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | +||+ | ||+|| || | || ||| | || ||| Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACAGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | |+ ||| ||+| || |||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS0000D5D8EC_9606 Homo sapiens (human) non-protein coding lnc-SMC1B-2:2 E-value: 5.1e+2 Identity: 56.16% Query coverage: 55.66% Gaps: 16.44% Alignment: Query 90 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU------------GGUAAA-----CCAAC---GCGCUCACCAAGUGCAAU 158 ||| |||| | || || | |||||| || | || | |||||| | ||| | | || | ||| ||| Sbjct 876 AACCUCAAAGGAGGAGGUACCAUCUCCCUCUGGACAAGUUUACCGGAAAAUCGGUAAAUUCCCCAAACUCAGUGUUCUC-CUGUGUAAU 963 Query 159 GUGAGCCAUUG---AUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | |||||| || |||| | || | | |||| |||| | |||| || ||| Sbjct 964 GCAGCCCAUUGUGUGUGCAGGCAUCCACCAUCCAUGAUGGGCCCUUGACCUCGCCCA 1020 >> URS0000EAE84C_9606 Homo sapiens (human) HSALNT0278765 E-value: 5.1e+2 Identity: 56.16% Query coverage: 55.66% Gaps: 16.44% Alignment: Query 90 UACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAU------------GGUAAA-----CCAAC---GCGCUCACCAAGUGCAAU 158 ||| |||| | || || | |||||| || | || | |||||| | ||| | | || | ||| ||| Sbjct 1036 AACCUCAAAGGAGGAGGUACCAUCUCCCUCUGGACAAGUUUACCGGAAAAUCGGUAAAUUCCCCAAACUCAGUGUUCUC-CUGUGUAAU 1123 Query 159 GUGAGCCAUUG---AUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 | |||||| || |||| | || | | |||| |||| | |||| || ||| Sbjct 1124 GCAGCCCAUUGUGUGUGCAGGCAUCCACCAUCCAUGAUGGGCCCUUGACCUCGCCCA 1180 >> URS00023851A1_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC002860) E-value: 5.1e+2 Identity: 57.28% Query coverage: 46.15% Gaps: 0.97% Alignment: Query 98 AUUAUGA-CGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACG 181 |||||| || | | | ||| ||| | | || |||| | ||||||| ||| | || | || | || | | Sbjct 161283 AUUAUGGUUUUCUAAACCCUAACUAGGGUUUUUAGCCAAAUAACGAACCAACCAAGUCCAACAUUAGGCUUUUAGGUCCAUUAGG 161367 Query 182 GCCCUUCUUGAUCGGCCG 199 ||||| || | ||| | Sbjct 161368 GCCCUACUAGGCCGGGCA 161385 >> URS000234C7ED_4513 Hordeum vulgare (H. vulgare) long non-coding RNA (HVUL_LNC019035) E-value: 5.2e+2 Identity: 62.35% Query coverage: 37.56% Gaps: 4.71% Alignment: Query 17 CUGUAAGUAAACAAGA--GGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAU 99 ||| |||| | | | | ||||||||| | || | |||||| |||||||| | | || ||| | ||||||| Sbjct 18988 CUGCAAGUUAGCCGAAUUGAUGUCAAAUUUUAUAGUUUGUGGGUUGGCAAGGGCCGCGGUAGAACAUAACCCACAU--CACAAAU 19070 >> URS00000E041E_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.3e+2 Identity: 56.58% Query coverage: 66.06% Gaps: 8.55% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAG--UGCAA 157 | ||| | | ||| || |||||||| ||| || | | ||| ||| | | |||||| || || | || ||||| Sbjct 8 GUGAAUUCAGCCUCCCCCUGCCACAAAUCAUGCAGUGGAGUUCACCACACUUAG-------GAAAACCACAUUGCACAUCCAGAAUGCAA 90 Query 158 UG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAA 217 || |||| | | | | || || |||| ||||| | |||| | ||||| Sbjct 91 UGGUUGAGUCUUGGCCCUGGGAAACCCACCUUUGUGAUCCUGGUAUGGCCCCUGCUGGGUAA 152 >> URS0000BB0A26_6335 Trichinella nativa U1 spliceosomal RNA E-value: 5.3e+2 Identity: 56.07% Query coverage: 71.04% Gaps: 16.76% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC-UCCCACUUGGGGA--------GAUGGUAAACCAACGCGCUC 146 ||| |||||||||| |||| | | ||| ||| |||| || | | ||||| || |||| | ||| | || Sbjct 4 GGGUGGCGCGAACGCCGACCCUCACACCCAAAAACUAUGCAGUGAGCACGUCCCAGUUCGGGACGGCCCCAG-AGGUCA------GCUGCU 87 Query 147 ACCAAGUGCAAUG--UGAGCCA-----UUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | ||||||||| | |||| | || || | |||| ||||| | ||| |||||||||||| Sbjct 88 UCGGAGUGCAAUGAAUCAGCCUCACCCUGGAAGUU------CGAUCUUCCUGAUCAUCGAAACUUCCCUGCCAGGUAAGUAU 163 >> URS00027F5054_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015032189.1) E-value: 5.4e+2 Identity: 59.04% Query coverage: 36.65% Gaps: 2.41% Alignment: Query 77 CGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC--UCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 | | || ||||||||||||||| || | |||| || ||||||| | | | ||| | | |||| || Sbjct 263 UACAGUCUCCUACUACCACAAAUUAUGCAGUGGAGCAUCUCACAUUUGGGGAACUUGCUGGGCUCCGCACGUCCAGAGUGUAA 345 >> URS00007FC796_29170 Ancylostoma caninum (dog hookworm) U1 spliceosomal RNA E-value: 5.5e+2 Identity: 58.08% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGAU-------GGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | +||+ | ||+|| || | || ||| | || ||| Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | |+ ||| ||+| || |||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS00007FC796_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 5.5e+2 Identity: 58.08% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGAU-------GGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | || ||||| | +||+ | ||+|| || | || ||| | || ||| Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | |+ ||| ||+| || |||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS00023D1C32_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC008125) E-value: 5.6e+2 Identity: 57.75% Query coverage: 61.54% Gaps: 10.56% Alignment: Query 55 UAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACC-ACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAAC 140 | || || || | | | ||| || ||||||||||| || || | || |||||||| | || | | | | || | | Sbjct 47991 UCAUCAGCCGGCUCGGAGAGAAGGCUCUCCCCCUCUACCGACUCAUGAAGAAGUCCACUCAC----UUUGAGUG---G--AAUGACC 48068 Query 141 GCGCUCACCAAGUGCAAUGUGAGCCAUU---GAUGUAGGCCACG--GCCCUUCUU 190 || |||||| |||| | |||| | ||||| ||| |||| Sbjct 48069 AGGCGGACCAAGCUUUCCACGAGCUAAAGAAGAUGCUGUCCACGCCGCCUGUCUU 48123 >> URS0000465BB6_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.7e+2 Identity: 55.19% Query coverage: 66.97% Gaps: 5.19% Alignment: Query 73 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCC--ACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA----AGUGCA 156 |||| | |||| ||||||||||| ||| ||| || | | |||||| | | | || | || | | ||| Sbjct 13 UGAACACA-GCCCCUGCUACCACAAAUCAUGCAGUCACAACACCUGAAUCUGGGGAAACUACAGAGGUACCAGAUCUAGAGUACAAUGCG 101 Query 157 AUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||||| || || || ||| | ||||| |||| ||||| |||| | Sbjct 102 GGGUGAGCCUCAGAGUGAGAAGACUGCCUU-UAUGAUCAUAGUAUCUCCCCUUCCAGCUAAGCA 164 >> URS000195D64F_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000043013.1) E-value: 5.9e+2 Identity: 56.03% Query coverage: 61.99% Gaps: 7.80% Alignment: Query 71 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAU 158 | | | | | | || | |||||||||||| || | | ||| || ||||||| || | | | ||| |||||| Sbjct 292 CUCAUAUGAAGUCUCUCUUUGCCACAAAUUAUGCAGUUGAGUUUCCUGCAGUUGGGGAAAUUAC-----AGGGGUCAGCCCAUCUGCAAU 376 Query 159 G--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCC 207 | | |||| | | || || | ||||||| | | ||| ||| Sbjct 377 GGAUAAGCC-UCGCUGG-GGAAAUCACCCUUCUGGUCAUGGAAUCGCCCCU 425 >> URS00023D3A8B_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC038647) E-value: 5.9e+2 Identity: 56.90% Query coverage: 52.04% Gaps: 3.45% Alignment: Query 28 CAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGC-GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 | ||||| | | || || ||| || ||| ||| ||| | | | | | | | | || || || || || | | Sbjct 4980 GAGAAGGGAAUACAGUUCAAGUUUUGGCAAUC---AGGCGCCCACCUAGAAGGGAAGGGAGUACAGCUAAAGUUUUGGCGAUCAGACAC 5065 Query 116 CCACUUGGGGAGAUGGUAAACCAACGC 142 |||||||| || |||||| ||| | Sbjct 5066 CCACUUGGAGAAUAGGUAAAUCAAUUC 5092 >> URS00001E3C3B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.2e+2 Identity: 59.26% Query coverage: 35.75% Gaps: 2.47% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCAC--UCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAU 158 | || ||||||||||||||| || | |||| || ||||||| | | | ||| | | |||| || Sbjct 20 AGUCUCCUACUACCACAAAUUAUGCAGUGGAGCAUCUCACAUUUGGGGAACUUGCUGGGCUCCGCACGUCCAGAGUGUAAA 100 >> URS0000272E27_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 6.2e+2 Identity: 54.19% Query coverage: 63.80% Gaps: 14.19% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAU----------GGUAAACCAACGCGCUCACCAAGUGCAA 157 ||||| | |||| |||||||| | | | | ||| || ||||| | || |||| | | | ||||||| Sbjct 20 AGUCCCCCACAACCAUAAAUUAUGCAGCCGAGUUUCCUACAUUUGGGAAAAUUGGGGGGGGGGGUAG-------CACAGCCAGAGUGCAA 102 Query 158 UG--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || | ||| | | | || | ||||| |||| |||| |||| |||||| Sbjct 103 UGGAUAAGC-CUCGCCCUGGGAAAACCACCUUCGAGAUCAUUGUAUAUCCCCUGCCAGCUAAGUA 166 >> URS0000DC98ED_29170 Ancylostoma caninum (dog hookworm) U1 spliceosomal RNA E-value: 6.6e+2 Identity: 58.68% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAGAU-------GGUAAACCAACGCGCUC 146 |||||||||| |||| | |||| | |||||||| | || | || || || | || ||| | || ||| Sbjct 4 GGGCCGCGCGUACGC--AGCCCCACACACACAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | | ||| || | || |||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS000194C9C2_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000043013.1) E-value: 6.6e+2 Identity: 55.80% Query coverage: 60.63% Gaps: 7.97% Alignment: Query 71 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAU 158 | | | | | | || | |||||||||||| || | | ||| || ||||||| || | | | ||| |||||| Sbjct 292 CUCAUAUGAAGUCUCUCUUUGCCACAAAUUAUGCAGUUGAGUUUCCUGCAGUUGGGGAAAUUAC-----AGGGGUCAGCCCAUCUGCAAU 376 Query 159 G--UGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGAC 204 | | |||| | | || || | ||||||| | | ||| | Sbjct 377 GGAUAAGCC-UCGCUGG-GGAAAUCACCCUUCUGGUCAUGGAAUCGCC 422 >> URS0002417B7D_88036 Selaginella moellendorffii (S. moellendorffii) long non-coding RNA (SMOE_LNC000317) E-value: 7e+2 Identity: 54.09% Query coverage: 62.44% Gaps: 20.75% Alignment: Query 20 UAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGAC 105 | ||||| || | |||| ||| ||| | |||||| | | | | | | ||||| | |||| |||| ||| |||| Sbjct 24778 UUGGUAAAUAAAA--GACCCUAUUAAAAAAUCAGGUAACAGU----UGAGGAGGUAGAGAGUACCGCAUCUAGCACAGAUUCUGAC 24857 Query 106 --------GUCCACUC----UCCCACUUGGGGAGAUGGUAAACCAACGC---------GCUCACCAAGUGCAA 157 || || || |||||| | |||||| | || ||||||||||| Sbjct 24858 UUAAAGGCGUUCAGUCAUAAUCCCAC------ACAUGGUAGCUUCAUGCUAUUGACUUUUCUACCAAGUGCAA 24924 >> URS000233672F_9606 Homo sapiens (human) HSALNT0320800 E-value: 7.1e+2 Identity: 59.04% Query coverage: 37.56% Gaps: 6.02% Alignment: Query 78 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU 160 || | ||||||||||||| | || | | |||||| | ||||| || || | | ||| ||||| || Sbjct 3315 GCAGUAUGCUGCUACCACAAAUUACGCAGUUGAGUUUCCCACAUUUGGAGA-----AAUCACAGGGAUCAGCAAGUCUUCAGU 3392 >> URS00004E9AB5_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.1e+2 Identity: 73.47% Query coverage: 22.17% Gaps: 0.00% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 128 || | ||| ||||||||||||||| ||| |||||| | ||||| Sbjct 19 GUCCUCCCACUACCACAAAUUAUGUACCUGACUUUCCCACAUUUGGAGA 67 >> URS00026AB434_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 7.1e+2 Identity: 55.77% Query coverage: 42.99% Gaps: 8.65% Alignment: Query 54 GUAAUUGGCAG-----GGGCCGCGCGAACGC----GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGU 132 | || ||||| || | |||| | || | ||| ||||| | | | | ||| | | | | ||| |||||||| Sbjct 4312 GGAAGAGGCAGUGGUGGGACGGCGCUACAGCUGAAGGACCUCCUCUCCUCCCUACAGUAUCGUUUUCCCACUCCCUUAUAGAGAUGGU 4399 Query 133 AAACCAACGCGCUCAC 148 ||| | |||| | Sbjct 4400 AAAGCUCUACGCUGUC 4415 >> URS00027EF012_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015033696.1) E-value: 7.2e+2 Identity: 60.67% Query coverage: 39.37% Gaps: 6.74% Alignment: Query 43 UUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGA 126 |||| | | ||| ||||| || ||| || | | ||||||||||||||| || | | ||| || |||| Sbjct 10503 UUUAUAAU----UAACAAACAGGGAGAGCAUGAAUGCCAUUUCUCACUACCACAAAUUAUGUAGUUGAGUUUCCUGUGUUUAGGGA 10584 Query 127 GAU 129 ||| Sbjct 10585 GAU 10587 >> URS00027F3CB4_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034700.1) E-value: 7.3e+2 Identity: 57.63% Query coverage: 50.68% Gaps: 5.93% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAA--ACCAACGCGCUCACCAA 151 ||||| | || | || ||||||||||| || | | ||| || || |||| || | || | || || | Sbjct 25456 AUGCGAAUGUAGUCCUCUACUUUCACAAAUUAUGCAGUUGAGUUUCCUGCAUUUUGGGACAUUUCAGGGGUCAGCACGUCCA-GGA 25540 Query 152 GUGCAAU--GUGAGCCAUUGAUGUAGGCCACG 181 ||||||| |||||||| | || || Sbjct 25541 GUGCAAUAGAUGAGCCAUAGCCUGAGAAAACC 25572 >> URS00001B9E97_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.4e+2 Identity: 57.14% Query coverage: 62.44% Gaps: 9.29% Alignment: Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGA 170 ||| ||| ||||||| ||| || | | || || ||||||| || || | ||||| || || ||||||| | | Sbjct 21 UUCCCACUAACACAAAUGAUGCAGUUGAGUUUCUUGCAUUUGGGGA-------AAUCACAGGGCUCAGCAGAUG---GGUGAGCC-UCGC 99 Query 171 UGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | || | ||||| || || || | ||||| ||||| Sbjct 100 CCUGGGAAAACUACCUUCCUGUUCAUGAUGUCUCCUCUACCAGGGAAGUA 149 >> URS00002C68B3_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.5e+2 Identity: 71.70% Query coverage: 23.08% Gaps: 3.77% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAA 134 | || ||| ||||||||||| ||| | | |||| | ||||||| || | | Sbjct 14 CUCCACUAUCACAAAUUAUGCAGUCGAGUUUCCCGAAUUUGGGGAAAUUGCAG 66 >> URS000240F129_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC015557) E-value: 7.5e+2 Identity: 66.18% Query coverage: 30.77% Gaps: 1.47% Alignment: Query 33 GGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUU 100 |||||| | |||| | ||| | ||||| || ||||||||| |||| | || || ||| | Sbjct 49251 GGGACCCACUUUUUGGUC-UGGUUCGGGCCAGGGAUCGUGCGAACGCGCACCCUCCCUUCCCCAACAU 49317 >> URS00023FB6F4_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC010812) E-value: 7.7e+2 Identity: 57.83% Query coverage: 36.20% Gaps: 13.25% Alignment: Query 58 UUGGCAGGGGCCGCGCG---AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACC 137 |||| ||||| || | || | || | ||||||| | || || | ||| |||||||||||| | | Sbjct 30396 UUGGUCUGGGCCACGAGUUGAAAUUGAGCC--------CUACAAUUAUGUCAUCUACAAUUCCAAUUGGGGAGAUGGCUAGUC 30470 >> URS000240D104_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC010812) E-value: 7.7e+2 Identity: 57.83% Query coverage: 36.20% Gaps: 13.25% Alignment: Query 58 UUGGCAGGGGCCGCGCG---AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACC 137 |||| ||||| || | || | || | ||||||| | || || | ||| |||||||||||| | | Sbjct 30722 UUGGUCUGGGCCACGAGUUGAAAUUGAGCC--------CUACAAUUAUGUCAUCUACAAUUCCAAUUGGGGAGAUGGCUAGUC 30796 >> URS0002365A95_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC008535) E-value: 8.1e+2 Identity: 54.96% Query coverage: 56.11% Gaps: 15.27% Alignment: Query 45 UAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-------UCUCCCACUUGGGGA 126 |||| || || || | ||| | | | | | || ||| ||| ||| || |||| ||||||| ||| | Sbjct 5759 UAAACUUGGGCAAAUCGCAAUGCC-GAG------------GCUUCCACCUCAAUUUAAGAUACCCACUAUCCUUUCUCCCAUUUGCCAA 5834 Query 127 GAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUU 168 | | || | |||| | ||| ||| | ||||| ||| Sbjct 5835 GCAAUUGAAACCACGCUCCGCAAAAGGGCAUUUUGAGCUAUU 5876 >> URS00023DA8EC_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC008534) E-value: 8.1e+2 Identity: 54.96% Query coverage: 56.11% Gaps: 15.27% Alignment: Query 45 UAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-------UCUCCCACUUGGGGA 126 |||| || || || | ||| | | | | | || ||| ||| ||| || |||| ||||||| ||| | Sbjct 8874 UAAACUUGGGCAAAUCGCAAUGCC-GAG------------GCUUCCACCUCAAUUUAAGAUACCCACUAUCCUUUCUCCCAUUUGCCAA 8949 Query 127 GAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUU 168 | | || | |||| | ||| ||| | ||||| ||| Sbjct 8950 GCAAUUGAAACCACGCUCCGCAAAAGGGCAUUUUGAGCUAUU 8991 >> URS00024036D5_3694 Populus trichocarpa (black cottonwood) long non-coding RNA (PTRI_LNC001867) E-value: 8.2e+2 Identity: 63.89% Query coverage: 32.58% Gaps: 0.00% Alignment: Query 125 GAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGG 196 ||||||| | || || ||||| ||| || || | | ||| | || | |||||| ||| ||| | Sbjct 95717 GAGAUGGAAUACUAAGUUGCUCAUAAAGAGCCAUCUUGUUCCUUGGGGGAGCUCUAGGCCCUCCUUUAUCUG 95788 >> URS00024273C8_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC000139) E-value: 8.4e+2 Identity: 58.43% Query coverage: 40.27% Gaps: 10.11% Alignment: Query 96 AAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGG 182 ||| ||| || || ||||||| |||||||||| | | | | || | || || || ||| | || ||| || Sbjct 47067 AAAGUAUACUGU---CUAUCCCACUAGGGGAGAUGGAUAUAUAGAGUCC---UCAUGGGCCAUAUGGGCCUUCAAUAUAGA---UGG 47144 Query 183 CC 184 | Sbjct 47145 GC 47146 >> URS00000F8939_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.2e+2 Identity: 61.19% Query coverage: 30.32% Gaps: 0.00% Alignment: Query 69 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA 135 | | |||| | ||||| || | |||||||||| ||| | | ||| | ||||| | | Sbjct 9 AGUGUGAACACAGUCCCCCACUCCUACAAAUUAUGCAGUCGAGUUUCCUGAAUUCGGAGAAAUCAUA 75 >> URS0001977EF1_158456 Betta splendens (Siamese fighting fish) uncharacterized LOC114850675 (ENSBSLG00000023756.1) E-value: 9.2e+2 Identity: 63.29% Query coverage: 33.48% Gaps: 13.92% Alignment: Query 107 UCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU-----GAGCCAUUGAUGUAGGCCAC 180 | | ||| ||| ||| ||||| ||||||||| |||||| || ||| || |||||| |||||| Sbjct 234 ACGAAUCUGCCAGUUGUGGAGA-----CACCAACGCGUUCACCAUGUCG-CUGUUCCUGCUGCUGUUGAUGCUGGCCAC 306 >> URS0002187333_50452 Arabis alpina U1 spliceosomal RNA E-value: 9.2e+2 Identity: 65.79% Query coverage: 34.39% Gaps: 1.32% Alignment: Query 145 UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || | | |||||||| | |||| |||||||| || |||| || | | |||| | || |||| |||| Sbjct 52 UCUCAAUGUGCAAUGAAAAUCAUUAGCCUAGGCCACAAGCCAUCUUAGUCACUCAUUGACC-CAUCUAGGUGAGUA 126 >> URS000239848F_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC016265) E-value: 9.2e+2 Identity: 55.47% Query coverage: 61.54% Gaps: 8.03% Alignment: Query 21 AAGUAAACAAGAGGGACCAAAUUUUAAAUUU-AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA 110 || ||| || |||| | ||||| ||| | || | | |||| | ||||| |||||||| | || | ||| | Sbjct 387 AAAUAACGAAAAGGGGCUAAAUUGUAAUGCGCUGAAAAAUAGGAGGGACUGCGCGCGUAAAUACCCCCUUUUAA-GAA---AACACGCGGA 473 Query 111 CUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 ||||| |||| | || || ||||| || | ||| Sbjct 474 UCCUCCCCUCUGGGUCG--GG----UCACCGCGCGGGUCAGGGGCA 513 >> URS000025A2D5_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 9.3e+2 Identity: 53.74% Query coverage: 66.06% Gaps: 2.72% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAG 163 || || | ||| ||||||||||||||| | |||| | |||| || | | | | || | ||||||||| Sbjct 14 AAAUGCAGUCUCCCACUACCACAAAUUAUGC---AAAUUCUCGAAUUUGGAGAAACUGAAGAGGUCAGCACAUCUGGAGUGCAAUGGAUA 100 Query 164 CCAUUGAUGUA-GGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 | | | || | | ||||||||| | || ||||||| || Sbjct 101 AGACUCACCCUGGGAAAACCACUUUCUUGAUCCUAGUAUCUCUCCUGCCAGGUAGGU 157 >> URS0002361B1A_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC008066) E-value: 9.3e+2 Identity: 60.00% Query coverage: 33.94% Gaps: 8.00% Alignment: Query 12 AGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCC 86 | ||| |||| ||| ||| || | ||| || | ||||| | || | |||||||| |||| | Sbjct 20303 CGUGCCCGUAAUUAACAAAGCUU------UAUUAAUAUUAAGAAAGUUGGCCGAGGUUGUGCGAACGCAUACCUC 20371 >> URS0002414CEE_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC008066) E-value: 9.3e+2 Identity: 60.00% Query coverage: 33.94% Gaps: 8.00% Alignment: Query 12 AGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCC 86 | ||| |||| ||| ||| || | ||| || | ||||| | || | |||||||| |||| | Sbjct 20330 CGUGCCCGUAAUUAACAAAGCUU------UAUUAAUAUUAAGAAAGUUGGCCGAGGUUGUGCGAACGCAUACCUC 20398 >> URS0002357B0F_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002639) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 26621 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 26705 >> URS0002363BAA_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002640) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 53123 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 53207 >> URS0002365509_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002639) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 5655 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 5739 >> URS00023664D4_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002640) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 43681 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 43765 >> URS0002374CDF_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002640) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 43681 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 43765 >> URS0002378E13_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002640) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 53088 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 53172 >> URS0002390AC4_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002640) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 53005 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 53089 >> URS00023917AB_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002642) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 24728 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 24812 >> URS00023ACEBE_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002640) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 11157 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 11241 >> URS00023BDDDC_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002640) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 53057 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 53141 >> URS00023D4005_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002640) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 43681 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 43765 >> URS0002410C3E_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002639) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 53389 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 53473 >> URS000241844B_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002639) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 26515 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 26599 >> URS000242321E_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002639) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 26622 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 26706 >> URS0002423756_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC002639) E-value: 9.5e+2 Identity: 57.65% Query coverage: 28.05% Gaps: 27.06% Alignment: Query 131 GUAAACCAACGCGCUC----------ACCAAGUGCAAUGUGAGCCAUUGAUGU-------------AGGCCACGGCCCUUCUUGA 192 | |||| ||||||| | | |||||||||| ||| ||||||||| | |||| | || ||| | | Sbjct 26289 GCAAACAAACGCGCCCUAAAUGACAAAGUAAGUGCAAUGAGAGUCAUUGAUGUUCACGCCAAACGUAUGCCAUGACCAUUCCUUA 26373 >> URS000236864D_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC021770) E-value: 9.9e+2 Identity: 56.39% Query coverage: 54.30% Gaps: 10.53% Alignment: Query 38 CAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUA-----CCCCCUCUA---CCACAAAUUAUGACGUC---CACUCU- 114 ||||| | | |||| | | ||| ||| || | ||| || | || || | | |||| | || || |||| | Sbjct 982 CAAAUGUCAGAUUUUGUUCAUUAGCAUAGGUU-CAUGAAUGCCGAGCGCAUCCAAUCGACAUCGUCAAACUUUGGGCUCUAGCACUUUG 1069 Query 115 -CCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 | ||| | ||||| | | |||||||||||||| | Sbjct 1070 CUCUGUUUGUGAGGAUGGAUCAAUAGUGCGCUCACCAAGUGGCA 1113 >> URS00023F4B3E_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC021770) E-value: 9.9e+2 Identity: 56.39% Query coverage: 54.30% Gaps: 10.53% Alignment: Query 38 CAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUA-----CCCCCUCUA---CCACAAAUUAUGACGUC---CACUCU- 114 ||||| | | |||| | | ||| ||| || | ||| || | || || | | |||| | || || |||| | Sbjct 2348 CAAAUGUCAGAUUUUGUUCAUUAGCAUAGGUU-CAUGAAUGCCGAGCGCAUCCAAUCGACAUCGUCAAACUUUGGGCUCUAGCACUUUG 2435 Query 115 -CCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 | ||| | ||||| | | |||||||||||||| | Sbjct 2436 CUCUGUUUGUGAGGAUGGAUCAAUAGUGCGCUCACCAAGUGGCA 2479 >> URS0002407EC2_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC021770) E-value: 9.9e+2 Identity: 56.39% Query coverage: 54.30% Gaps: 10.53% Alignment: Query 38 CAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUA-----CCCCCUCUA---CCACAAAUUAUGACGUC---CACUCU- 114 ||||| | | |||| | | ||| ||| || | ||| || | || || | | |||| | || || |||| | Sbjct 1900 CAAAUGUCAGAUUUUGUUCAUUAGCAUAGGUU-CAUGAAUGCCGAGCGCAUCCAAUCGACAUCGUCAAACUUUGGGCUCUAGCACUUUG 1987 Query 115 -CCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 | ||| | ||||| | | |||||||||||||| | Sbjct 1988 CUCUGUUUGUGAGGAUGGAUCAAUAGUGCGCUCACCAAGUGGCA 2031 >> URS000012ED1C_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1e+3 Identity: 59.18% Query coverage: 39.82% Gaps: 16.33% Alignment: Query 78 GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCU------CACCAAGUGCAAUG 159 || ||||| || |||||||| | || ||| | | | | ||||| | || ||| | |||| ||||||||| Sbjct 18 GCAGUCCCCCACUGCCACAAAUCACACAGUUGACUUUUCUGAAUUAGGGGAAA------UCCUACGGAUUGACAAACACCGAGUGCAAUG 101 Query 160 U--GAGCC 165 | ||||| Sbjct 102 UAUGAGCC 109 >> URS0000819044_53326 Ancylostoma ceylanicum U1 spliceosomal RNA E-value: 1e+3 Identity: 58.08% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC--CCACUUGGGGAGA------UGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| || ||||| | || || | | ||| | || ||| | || ||||| Sbjct 4 GGGCCGCGCGAACGCAG--CCCCAAACGCAAAAAUUUAGCUGUUGGCUAACCUCAACUCGAGGCUGCCACACAGGUCAGCCC--GCGCU- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||||||||| | | | ||| || | || |||||||||||| | |||| |||||||||| Sbjct 89 --AUAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUCUUGAUCGCGAGAGCCCCCCAGCCAGGUAAGUU 161 >> URS0000C9773C_45464 Teladorsagia circumcincta U1 spliceosomal RNA E-value: 1e+3 Identity: 58.43% Query coverage: 70.14% Gaps: 12.05% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC-CACUUGG-GGA------GAUGGUAAACCAACGCGCUC 146 ||||||||||||||| |||| | | ||||| | |||+ || || ||| | | || | ||| | || | | Sbjct 4 GGGCCGCGCGAACGCAG--CCCCACACGCGAAAAUUUAGCCGUUGGCUAACCUCACCUCGAGGUUGCCACGCGGGUCAGCCUAAAC---- 87 Query 147 ACCAAGUGCAAUGUGAGCCAUUGA---UGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 + | |||||||||||| | | | ||+| || ||||| |||||| | + |||| |||||||||| Sbjct 88 -UAAGGUGCAAUGUGAGGGCCUCACCACGGGGGUCCCG--CCUUCCUGAUCGCGAGAUCCCCCCAGCCAGGUAAGU 160 >> URS00023A37B4_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC012524) E-value: 1e+3 Identity: 57.93% Query coverage: 63.80% Gaps: 8.97% Alignment: Query 4 CUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCG--CGAACG--CGUACCCCCU 88 | ||| |||| || | | || ||| |||| | | ||| || | ||| || | || | || | |||| |||||||||| Sbjct 3386 UUGAUCUAAGGCCCAAUGGGCCAAAGAGAUAAACCAGAAUAUAAGUUACGUUAAGGGGAGGAGGUCACGAACCAACGUUCGUACCCCCU 3474 Query 89 CUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGC 144 | ||| || || || | | | |||| || ||||||||| | Sbjct 3475 CGACCC-AA-CUAACGCG------CCCUGAUCGGGGGCGA-CCCAAACCAACGUGG 3521 >> URS0000454C86_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.1e+3 Identity: 65.12% Query coverage: 37.10% Gaps: 4.65% Alignment: Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCA 166 ||| ||| ||||||||||| || | | ||| || |||| || || | | || | || ||||||||| | ||||| Sbjct 7 CCCACUAUCACAAAUUAUGCAGUGGAGUUUCCUGCAUUUGGAGAAAUCGCAGGGGUCAGCUCAUACGGAGUGCAAUGGAUAAGCCA 92 >> URS0000E33CF9_7266 Drosophila guanche non-coding RNA E-value: 1.1e+3 Identity: 55.24% Query coverage: 46.61% Gaps: 1.90% Alignment: Query 57 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA--GAUGGUAAACCAACGCGCU 145 | ||| | |||||||||| ||| |||||| |||||| | | | ||| | ||| || | | | | | Sbjct 359 UAAUGUCGGGACGGCGCGAACGCCAUUCCCGGCUACCAAAAAUUACACGCACGAGUUAUUCACAUUAGGAAUAAUCGCAGAGGUCAACUCA 449 Query 146 CACCAAGUGCAAUG 159 | |||||||||| Sbjct 450 GCCGAAGUGCAAUG 463 >> URS00025EFEA6_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000057142.1) E-value: 1.1e+3 Identity: 58.59% Query coverage: 44.80% Gaps: 8.08% Alignment: Query 86 CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUA 174 ||| || || |||| ||| | |||| |||||| | |||| | | ||||||| | |||| ||| ||| || Sbjct 1560 CCUGAACAACUGAUUAAGACUUUGCUCCUCCUCCUUGGGAAACUGGUGAGCAUU---CCUCACCAGGCUCAAUUUGACCCAA----GUG 1641 Query 175 GGCCACGGCC 184 | | | ||| Sbjct 1642 G-ACUCUGCC 1650 >> URS0000E83B77_96440 Salvator merianae (Argentine black and white tegu) lncRNA (ENSSMRG00000022345.1) E-value: 1.1e+3 Identity: 54.70% Query coverage: 48.87% Gaps: 7.69% Alignment: Query 47 AAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACG-------UCCACUCUCCCACUUGGGGAGAU 129 | || |||| | |||| | ||||| || || || ||||||||| ||| | | | | | || | | |||| Sbjct 332 GACUUCAGUAACUUCAAGGGAUAGUGCGAAUGCAGUCCUCCACUACCACAAUUUAGCAAAGGAAAACUGCUCAAUAGCAGUAGAGGAGCA 421 Query 130 GG--UAAACCAACGCGCUCACCAAGUG 154 | | | | | | || |||||| | Sbjct 422 GAUUUCAGCAAGUGUGCCUACCAAGAG 448 >> URS00021F556F_28377 Anolis carolinensis (green anole) lncRNA (ENSACAG00000034300.2) E-value: 1.1e+3 Identity: 65.67% Query coverage: 27.60% Gaps: 8.96% Alignment: Query 93 CACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGC------UCACCAAGU 153 ||| | |||| | ||| |||||| ||||||||||| | ||| | | ||||||||| Sbjct 1870 CACUAGAGAUGAGGACCAGGGUCCCACAUGGGGAGAUGGGACACCUGCCAACUUUUAGUCACCAAGU 1936 >> URS0000EB8F30_9606 Homo sapiens (human) HSALNT0165484 E-value: 1.2e+3 Identity: 66.07% Query coverage: 25.34% Gaps: 10.71% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA 135 |||||||| ||||||||||||||| ||| | ||| | ||| | || Sbjct 153 GUACCCCCACUACCACAAAUUAUGCAGUCAGGUUUCCUGC------AGACGUCAAC 202 >> URS0002343FD0_9606 Homo sapiens (human) HSALNT0358904 E-value: 1.2e+3 Identity: 66.07% Query coverage: 25.34% Gaps: 10.71% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA 135 |||||||| ||||||||||||||| ||| | ||| | ||| | || Sbjct 24 GUACCCCCACUACCACAAAUUAUGCAGUCAGGUUUCCUGC------AGACGUCAAC 73 >> URS00007F7307_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 1.2e+3 Identity: 56.89% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGA-------UGGUAAACCAACGCGCUC 146 |||||||||| |||| |||| | || ||||| | || | || || || | || ||| | || ||| Sbjct 4 GGGCCGCGCGUACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | ||| || | || |||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCUGGCCUCACUAUGGGGGUCCCG--CCUUGAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS0000B5AE2C_6335 Trichinella nativa U1 spliceosomal RNA E-value: 1.2e+3 Identity: 59.38% Query coverage: 70.59% Gaps: 5.00% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA--CCAACGCGCUCACCAAG 152 ||| |||||||||| ||| | ||| | |||||| | || || ||| || ||| | | | || ||| | || Sbjct 4 GGGAUAGCGCGAACGCAAUCCCACACUA--AAAAAUUACGCGGUUGCCUGCCCCUAUUCGGGGCAGCACAGAGUUCAGCGCC-AUUCGUAG 91 Query 153 UGCAAUGUGAGC-CAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGA-CCCCGUCCAGGUAAGU 219 ||||||| | | | | | || | ||||||||||| | ||| | |||| ||| |||||| Sbjct 92 UGCAAUGAAUACGCCUCCCUCUGGGAUUCCUGCCUUCUUGAUCA-CAGUCAAUCCCCCGCCAAGUAAGU 159 >> URS0000E96AF6_9606 Homo sapiens (human) HSALNT0165482 E-value: 1.3e+3 Identity: 66.07% Query coverage: 25.34% Gaps: 10.71% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA 135 |||||||| ||||||||||||||| ||| | ||| | ||| | || Sbjct 1123 GUACCCCCACUACCACAAAUUAUGCAGUCAGGUUUCCUGC------AGACGUCAAC 1172 >> URS0002334F41_6289 Haemonchus contortus mir-5928 microRNA precursor family E-value: 1.3e+3 Identity: 65.22% Query coverage: 31.22% Gaps: 0.00% Alignment: Query 35 GACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUG 103 | ||||||| |||| || |||||| |||| | ||| | | | | |||||| |||||| | Sbjct 2 GCUCAAAUUUGAAAUACAGUAAAUUGGUAGGGUCAGCGAUACUACUAAUCUACUCUACUUCAAAUUUGG 70 >> URS00023B34A5_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC001929) E-value: 1.3e+3 Identity: 88.57% Query coverage: 15.84% Gaps: 0.00% Alignment: Query 187 UCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | ||||||| || |||||||||||| ||||||||| Sbjct 2 UAUUGAUCGCCCAUCGACCCCGUCCGGGUAAGUAU 36 >> URS00023CB939_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC005129) E-value: 1.3e+3 Identity: 50.00% Query coverage: 65.16% Gaps: 19.38% Alignment: Query 51 UAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA 139 ||||| | || || ||| |||||| | || ||| | | | ||||| ||||| || | || | Sbjct 2479 UAGGUUUUCGGGAGACGCCU----------CUUUCCCUCUCUCUCAGAUUUGCAAAUUCUUUCUCC--AGUGGGGUCAUCAUCAAAGAU 2555 Query 140 CGCGC----------------UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 | | ||| || | || ||||||| | || |||| ||| ||||| |||| Sbjct 2556 CCGGAGCACCGUCUCCAUUCGUCAUCAUUGGAAAAUUGAGCCACGGUUGGAGGCAACGACCCUU---GAUC 2623 >> URS00023D38FF_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC011067) E-value: 1.3e+3 Identity: 60.56% Query coverage: 25.79% Gaps: 19.72% Alignment: Query 48 AUUUAGGUAAU-----UGGCAGGGGCCGCGCGAACGCGUACCCCCUCU---------ACCACAAAUUAUGA 104 | ||||| ||| || | ||| | |||| | ||||||||||| | ||| |||| ||| Sbjct 61196 AAUUAGGAAAUUAUCUUGAAACGGGUCACGCGCAUGCGUACCCCCUUUGUUUGGUGCGCCAAAAAUCAUGU 61266 >> URS00023D79A7_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC005129) E-value: 1.3e+3 Identity: 50.00% Query coverage: 65.16% Gaps: 19.38% Alignment: Query 51 UAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA 139 ||||| | || || ||| |||||| | || ||| | | | ||||| ||||| || | || | Sbjct 2554 UAGGUUUUCGGGAGACGCCU----------CUUUCCCUCUCUCUCAGAUUUGCAAAUUCUUUCUCC--AGUGGGGUCAUCAUCAAAGAU 2630 Query 140 CGCGC----------------UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 | | ||| || | || ||||||| | || |||| ||| ||||| |||| Sbjct 2631 CCGGAGCACCGUCUCCAUUCGUCAUCAUUGGAAAAUUGAGCCACGGUUGGAGGCAACGACCCUU---GAUC 2698 >> URS0002421C7D_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC005129) E-value: 1.3e+3 Identity: 50.00% Query coverage: 65.16% Gaps: 19.38% Alignment: Query 51 UAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA 139 ||||| | || || ||| |||||| | || ||| | | | ||||| ||||| || | || | Sbjct 2477 UAGGUUUUCGGGAGACGCCU----------CUUUCCCUCUCUCUCAGAUUUGCAAAUUCUUUCUCC--AGUGGGGUCAUCAUCAAAGAU 2553 Query 140 CGCGC----------------UCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUC 194 | | ||| || | || ||||||| | || |||| ||| ||||| |||| Sbjct 2554 CCGGAGCACCGUCUCCAUUCGUCAUCAUUGGAAAAUUGAGCCACGGUUGGAGGCAACGACCCUU---GAUC 2621 >> URS00004E980D_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.4e+3 Identity: 55.56% Query coverage: 66.97% Gaps: 4.58% Alignment: Query 73 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG- 159 || | || | ||| || |||||||| ||| | | || | | ||| ||| || | | || | | ||| ||||| Sbjct 13 UGAGCAUAGUCCUCUACUAACAGAAAUUAUGCAGUCAAGUUUCUCAAAUUUGUGGAAAUCGCAGGGGUUAGCACAACCUGAGUACAAUGG 102 Query 160 -UGAGCCAUUGAUGUAGGCCACGGC-CCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||| || | || | | | ||||| || | |||| |||| ||||| Sbjct 103 AUGAGCC--UGGUCCUGGAAAAGCCACCUUCCCCAUUACGGUGUGUCCCCUGGCAGGCAAGUA 163 >> URS0002410AF3_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC003079) E-value: 1.4e+3 Identity: 53.17% Query coverage: 55.66% Gaps: 4.76% Alignment: Query 27 ACAAGAGGGACCA---AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA 110 |||| ||| || ||| | || ||||| | | ||| | | | | | || | ||| | | | ||||| Sbjct 77991 UGAAGAAGGAACAUAACAUUCUUUAUAUAGGUCACAACCCUGGGAUUAGAG--UUUUUCUCUCAUCAGCAGCAACUCGUCAAGUCCA 78075 Query 111 CUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACC 149 || ||| || ||| |||| | ||| ||| || Sbjct 78076 GCUACCGACUCGGUGAGUUGGUCACUUAACUCGCGA-CC 78113 >> URS00007E8DD7_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 1.5e+3 Identity: 57.49% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGAU-------GGUAAACCAACGCGCUC 146 |||||||||| |||| |||| | || ||||| | || | || || || | || ||| | || ||| Sbjct 4 GGGCCGCGCGUACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | | ||| || | || |||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUCCCG--CCUUAAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS000237E422_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC006400) E-value: 1.2e+2 Identity: 62.96% Query coverage: 36.65% Gaps: 0.00% Alignment: Query 73 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGU 153 |||| | |||| | ||| |||||||||| || | || || |||||| | ||| || | | | |||||| Sbjct 11002 CGAAUGGAAACCCUCGCUAUCACAAAUUAUUACAUAGACCCUGCCACUUAGACAGACCUUAGGCAGGUACCCCUCCCAAGU 11082 >> URS0002184C5B_9305 Sarcophilus harrisii (Tasmanian devil) lncRNA (ENSSHAG00000027492.1) E-value: 1.5e+3 Identity: 62.07% Query coverage: 37.56% Gaps: 6.90% Alignment: Query 28 CAAGAGG-GACCAAAUUUUAAAUUU---AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA 110 || ||| ||| ||||||| | ||| ||| || || || || || | | | |||||| | ||||||| || | | | Sbjct 765 CAGGAGCUGACAAAAUUUUCAGUUUCUAAGGAAAGUGUGAGU--GCGUGCACAUGUGCACCCCCACCACCACAAGAGAUUCCUUUAA 849 >> URS000233BEAC_9606 Homo sapiens (human) HSALNT0310815 E-value: 1.8e+3 Identity: 57.61% Query coverage: 40.72% Gaps: 2.17% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAU 158 | | |||| | ||| || ||| | |||||| || | | | || ||||||| || | | || | | |||||||| Sbjct 193 GUGUGAACACAGUUUCCCACUGCCAAAGAUUAUGCAGUUGAGUUCUCCACAUUUGGGGAAAUUGCAGGGAUCAGCACAUCCAGAGUGCAAU 283 Query 159 G 159 | Sbjct 284 G 284 >> URS00003E28E2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.8e+3 Identity: 56.70% Query coverage: 39.82% Gaps: 16.49% Alignment: Query 82 ACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCA-------AGUGCAAUGUGA 162 |||| ||||| |||| || ||| | | |||||| ||||||| || | | | ||| || ||||||||| | Sbjct 21 UUCCCCAUUACCAGAAAUCAUUUAGUCAAUUUUCCCACAUUUGGGGAAAU-------CUCAGGGGUCAACAUAUCUGUAGUGCAAUGGGU 103 Query 163 GCCAUUG 169 | | Sbjct 104 AAUACAG 110 >> URS0001A11CF3_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.8e+3 Identity: 57.02% Query coverage: 47.96% Gaps: 13.16% Alignment: Query 106 GUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGU--------AGGCCACGGCC 184 |||| ||||||||| ||| ||||| || ||| | | | || | | |||| ||| || || | ||| Sbjct 19432 AUCCAGUCUCCCACUGGGGAAGAUGAGAACACAAUGAGUGU--GAGCUGGAUCGCUGGCCAGUGAAGUGGCAGCUCAGAAGAAAGCC 19516 Query 185 CUUCUUGAUCGGCCGUCGACCCCGUCC 211 |||| | || || ||| ||||| Sbjct 19517 CUUCCU-----GCAGUGGACACCGUCU 19538 >> URS000196E9D3_9823 Sus scrofa (pig) lncRNA (ENSSSCG00050002746.1) E-value: 1.9e+3 Identity: 53.54% Query coverage: 44.80% Gaps: 7.07% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGA 162 |||| ||||| | ||| |||||||| || | || | ||| |||| | | || || || ||||| Sbjct 3397 AAACGUGUACCUAAUACCCCAUGAAUUAUGAGGUUUUCCAGCCUAGGUGGUGAGAGGAGACACUAAUUU-------CAGCCUUGUGUGA 3478 Query 163 GCCAUUGAUG 172 ||| | || Sbjct 3479 GCCUCAGGUG 3488 >> URS00020D6CF4_1709941 fungal sp. partial internal transcribed spacer region E-value: 1.9e+3 Identity: 67.53% Query coverage: 33.94% Gaps: 2.60% Alignment: Query 6 UAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAA-AUUUUAAAUUUAGGUAAUUGGCAGGGGC-CGCGCGAACGCG 80 || ||| | | ||| || ||| | || | | ||| ||| ||| ||||| | ||||| |||||||||||| Sbjct 7 UAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUAAAAAAUUAAUGAAUUGUCGGGGGCGCGCGCGAACGCG 83 >> URS00023DA799_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC012604) E-value: 1.9e+3 Identity: 56.32% Query coverage: 39.37% Gaps: 6.90% Alignment: Query 48 AUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGU 132 | || || |||| | | ||| | |||||| || | | ||| |||| | |||||||||| ||||| Sbjct 156341 ACUUGGGGCCUUGGUCGUGUCCGAACCAACGCGACACCUUUUGA------UAGGCGACAACCACCAUAUCACUUGGGGACAUGGU 156419 Query 133 AA 134 | Sbjct 156420 CA 156421 >> URS000242003E_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC012604) E-value: 1.9e+3 Identity: 56.32% Query coverage: 39.37% Gaps: 6.90% Alignment: Query 48 AUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGU 132 | || || |||| | | ||| | |||||| || | | ||| |||| | |||||||||| ||||| Sbjct 155438 ACUUGGGGCCUUGGUCGUGUCCGAACCAACGCGACACCUUUUGA------UAGGCGACAACCACCAUAUCACUUGGGGACAUGGU 155516 Query 133 AA 134 | Sbjct 155517 CA 155518 >> URS00026D816F_74358 Podarcis lilfordi non-coding RNA E-value: 1.9e+3 Identity: 68.52% Query coverage: 24.43% Gaps: 0.00% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUA 82 | ||| ||||| |||| || ||||| || |||| | |||||||| || Sbjct 299 AGGAGUUGCCAAAAUUUAUGUUGAGGUAGCGGGGAGGGAACACGCGAACGUGUG 352 >> URS00026FE06E_74358 Podarcis lilfordi non-coding RNA E-value: 1.9e+3 Identity: 64.81% Query coverage: 24.43% Gaps: 0.00% Alignment: Query 112 UCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCC 165 | || | | || || | ||| | ||| | || ||| ||||||||| ||| Sbjct 2194 UUUCUCUUGUCAGGGGAAGUUAAUCAAACACACUGACCUCGUGCAAUGUAAGCU 2247 >> URS000238CA9B_4555 Setaria italica (foxtail millet) long non-coding RNA (SITA_LNC006611) E-value: 2e+3 Identity: 58.33% Query coverage: 38.01% Gaps: 7.14% Alignment: Query 59 UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGC 142 |||| |||| || | | || | || | ||| || ||||| | |||| ||| | ||| || | || ||| | Sbjct 1797 UGGCUGGGGUAGCUCAAU------ACCUGUGAUCCGAACCUUAGGAGGUCCAUUUUCCCUCUUUGCGAGUUGCUCAAACAAUGA 1874 >> URS0000EC0185_9606 Homo sapiens (human) HSALNT0240751 E-value: 2.1e+3 Identity: 58.56% Query coverage: 47.06% Gaps: 7.21% Alignment: Query 8 UCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGG-----CAGGGGCCGCGCGAACGCGUACCCCCUC 89 ||| ||| ||| ||| ||| |||| |||||||| | |||| |||| ||| | || ||| || || ||| | || Sbjct 3156 ACAAGGGGACUGAAAGCAAA-AAGAAACCCCAAAUUUGACAUUUCUGGGUAGUUGUGUUAUCUGGAGCCACGACUACAGUCACCUCUUC 3243 Query 90 UACCACAAAUUAUGACGUCCAC 111 | || | |||| || Sbjct 3244 CCAACCCAACUCUGACACCCUU 3265 >> URS000233A874_9606 Homo sapiens (human) HSALNT0240753 E-value: 2.1e+3 Identity: 58.56% Query coverage: 47.06% Gaps: 7.21% Alignment: Query 8 UCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGG-----CAGGGGCCGCGCGAACGCGUACCCCCUCUA 91 ||| ||| ||| ||| ||| |||| |||||||| | |||| |||| ||| | || ||| || || ||| | || Sbjct 274 ACAAGGGGACUGAAAGCAAA-AAGAAACCCCAAAUUUGACAUUUCUGGGUAGUUGUGUUAUCUGGAGCCACGACUACAGUCACCUCUUCCC 363 Query 92 CCACAAAUUAUGACGUCCAC 111 | || | |||| || Sbjct 364 AACCCAACUCUGACACCCUU 383 >> URS0001E07F4E_1709941 fungal sp. partial internal transcribed spacer region E-value: 2.1e+3 Identity: 67.53% Query coverage: 33.94% Gaps: 2.60% Alignment: Query 6 UAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAA-AUUUUAAAUUUAGGUAAUUGGCAGGGGC-CGCGCGAACGCG 80 || ||| | | ||| || ||| | || | | ||| ||| ||| ||||| | ||||| |||||||||||| Sbjct 7 UAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUAAAAAAUUAAUGAAUUGUCGGGGGCGCGCGCGAACGCG 83 >> URS000257CDB2_61616 Pelobates cultripes (western spadefoot toad) non-coding RNA E-value: 2.1e+3 Identity: 72.00% Query coverage: 20.81% Gaps: 8.00% Alignment: Query 22 AGUAAACAAGAGGGACCAAAUUUUA----AAUUUAGGUAAUUGGCAGGGG 67 ||| | ||||||||||||| |||| || |||| ||| ||| | || Sbjct 41749 UGUACAAAAGAGGGACCAAACUUUAUCAGAAAUUAGUCAAUCGGCCGAGG 41798 >> URS000041D2D2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.1e+3 Identity: 69.49% Query coverage: 26.24% Gaps: 1.69% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC-ACUUGGGGAGAU 129 || | | | |||| ||||||||||||||| ||| | | ||| | || |||| || Sbjct 12 GCCACCACAGUCCCCUACUACCACAAAUUAUGCAGUCAAAUUUCCUGAAUUAGGGAAAU 70 >> URS0001C64A68_1709941 fungal sp. partial internal transcribed spacer region E-value: 2.1e+3 Identity: 67.53% Query coverage: 33.94% Gaps: 2.60% Alignment: Query 6 UAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAA-AUUUUAAAUUUAGGUAAUUGGCAGGGGC-CGCGCGAACGCG 80 || ||| | | ||| || ||| | || | | ||| ||| ||| ||||| | ||||| |||||||||||| Sbjct 7 UAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUAAAAAAUUAAUGAAUUGUCGGGGGCGCGCGCGAACGCG 83 >> URS00023F3AC4_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC004630) E-value: 2.2e+3 Identity: 60.00% Query coverage: 35.75% Gaps: 1.25% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACC-ACAAAUUAUGACGU 107 | |||| || | | || || ||| | ||| || || || | | ||| |||||| ||| ||| |||| | Sbjct 1748 UAAAGGGUCCCAUAUGUAUAUAUAGAUUUUUGUCAAGGCUAACGGGGUCCCGUGACCCCUCAACCCGCAACGUAUGUCCG 1827 >> URS0000074087_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.3e+3 Identity: 63.75% Query coverage: 34.84% Gaps: 6.25% Alignment: Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUA-AACCAACGCGCUCACCAAGUGCAAUG 159 |||| || |||||||||||| | | | ||| || ||||||| || |||| | | | ||||||||| Sbjct 20 UCCCCGCUGCCACAAAUUAUGCAGCCAAGCUUCCUGCAUUUGGGGAACUGCAGGGGUCAACACAC--CCAGAGUGCAAUG 97 >> URS0000422F7B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.3e+3 Identity: 60.87% Query coverage: 40.72% Gaps: 4.35% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA 157 | | |||| | |||| ||| | ||||||||| || | | ||| || ||||| | || | | | || || ||| ||| Sbjct 10 GUGUGAACAC--UCCCCAGCUAUCUCAAAUUAUGCCGCUGAGUUUCCUGCAGUUGGGAAAAUAGCAUAGGUCAGCUGAUCCCUAGUACAA 97 Query 158 UG 159 || Sbjct 98 UG 99 >> URS00005A8CA8_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.3e+3 Identity: 57.04% Query coverage: 63.35% Gaps: 2.11% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAU 167 || ||||| | | ||||| |||| | | | | |||||| ||||||| | | | | || |||| |||| | | | Sbjct 13 GUUCCCCCAUUGCUACAAA-UAUGCAGCCAAGUUUCCCACAUUUGGGGAAACCUCAGAGGAUAGCAGAACUGGAGUGGAAUGAUAAGCCU 101 Query 168 UGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 || |||| | ||| | ||||| |||| ||| |||||| Sbjct 102 UGUCCUAGGAAAACUGCCUACGUGAUCAUGGUAUUUCCCCUGCCAAGUAAGU 153 >> URS00007FBA1D_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 2.4e+3 Identity: 56.89% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACC---- 149 |||||||||| |||| |||| | || ||||| | || | || || || | || || | | || || || Sbjct 4 GGGCCGCGCGUACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGAC-UGCCACA----CGGGCCAGCCCGGG 86 Query 150 ---AAGUGCAAUGUGAGCCAUU---GAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | | ||| || | |||| |||||| | || |||| |||||||||| Sbjct 87 CGAAAGUGCAAUGCGCGGGCCUCACCAUGGGGGU--CCCUCCUUAGUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS0000B8DD6C_3981 Hevea brasiliensis miscellaneous RNA E-value: 2.4e+3 Identity: 59.68% Query coverage: 28.05% Gaps: 3.23% Alignment: Query 139 ACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGU 200 || | | | | ||||||||| | |||||||| ||||| | ||| || || Sbjct 539 ACC--CCCCUCCAAUGCAAUGUGGGUCAUUGAUGCCUGCCACACUUCCCUAGCAUCAGCUGU 598 >> URS000237BBE8_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC021770) E-value: 2.4e+3 Identity: 56.49% Query coverage: 53.39% Gaps: 10.69% Alignment: Query 38 CAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUA-----CCCCCUCUA---CCACAAAUUAUGACGUC---CACUCU- 114 ||||| | | |||| | | ||| ||| || | ||| || | || || | | |||| | || || |||| | Sbjct 944 CAAAUGUCAGAUUUUGUUCAUUAGCAUAGGUU-CAUGAAUGCCGAGCGCAUCCAAUCGACAUCGUCAAACUUUGGGCUCUAGCACUUUG 1031 Query 115 -CCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGC 155 | ||| | ||||| | | |||||||||||||| Sbjct 1032 CUCUGUUUGUGAGGAUGGAUCAAUAGUGCGCUCACCAAGUGG 1073 >> URS00001765BC_13616 Monodelphis domestica (gray short-tailed opossum) partial Rsx E-value: 2.4e+3 Identity: 54.55% Query coverage: 46.61% Gaps: 16.36% Alignment: Query 43 UUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCU-------ACCACAAAUUAUGACGUCCACUCUCCCACUU 121 |||| || | ||| || | | || | | | |||| || | |||| || | || | |||||||| Sbjct 20344 AGUAAAAUUUG-------GCA---GCUGGGAGAUCUCAUCCCCCUUCAUAUGUGGAAUACAAGUUUUUGGGUU-UUUUUCCCACUU 20418 Query 122 GGGGAGAUGGUAAACCAACGCGCU 145 ||| || ||| |||| | | || Sbjct 20419 GGGCAGCUGGGAAACGAUUCCCCU 20442 >> URS00007FFF84_51022 Ancylostoma duodenale U1 spliceosomal RNA E-value: 2.5e+3 Identity: 56.89% Query coverage: 70.59% Gaps: 11.98% Alignment: Query 65 GGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC-UCUCCCACUUGGGGAGAU-------GGUAAACCAACGCGCUC 146 |||||||||| |||| |||| | || ||||| | || | || || || | || ||| | || ||| Sbjct 4 GGGCCGCGCGUACGCAG--CCCCACACACAAAAAUUUAGCUGUUGGCGAAUCUCAGUUCGAGACUGCCACACGGGUCAGCCCGGGCG--- 88 Query 147 ACCAAGUGCAAUGUGAG---CCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 |||||||||| | | | ||| || || |||| |||||| | || |||| |||||||||| Sbjct 89 --AAAGUGCAAUGCGCGGGCCUCACCAUGGGGGUUCCG--CCUUGAUGAUCGCGAGACGCCCCCAGCCAGGUAAGUU 161 >> URS000238A4B3_13333 Amborella trichopoda (A. trichopoda) long non-coding RNA (ATRI_LNC001155) E-value: 2.5e+3 Identity: 60.87% Query coverage: 31.22% Gaps: 0.00% Alignment: Query 120 UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUC 188 | |||| | | | || ||||||| | ||| ||||| |||||| ||| | |||||| Sbjct 56375 UAGGGGUCAAAUACACCAAAGGCGCUCAGUGGAUACAAAUAAAGCCACUGAUGUGGGCUAAUGCCCUUA 56443 >> URS0002815506_6669 Daphnia pulex (Common water flea) uncharacterized LOC124208190 E-value: 2.5e+3 Identity: 59.49% Query coverage: 35.75% Gaps: 16.46% Alignment: Query 10 AAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCU 88 || |||||| | | ||||| || |||| |||||||| | | | |||||||||| | |||| Sbjct 1796 AAGGGGCCUAUGAAUAAACUAG--------AAUUCUAAAUUUAUUUUAAUUACAGGGGCCGCA-----GUGUACGGUGC 1861 >> URS00004AD4E1_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.6e+3 Identity: 67.27% Query coverage: 24.43% Gaps: 1.82% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU-GGGGAGAUGGUA 133 || | |||||||||||||||||| || | | ||||| | ||||| | Sbjct 18 GUCUCUCCUCUACCACAAAUUAUGGAGUUGAGUUUCCCAUAUUAACCAGAUGUCA 72 >> URS000234BE97_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004357) E-value: 2.6e+3 Identity: 56.45% Query coverage: 52.94% Gaps: 12.10% Alignment: Query 3 ACUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUU-----AGGUAAUUGGCAGGGGCCGCGCGAACGCGUA--CC 84 || |||| ||| || |||| | |||| ||||| | ||| | ||| |||| | ||| | | | || || || Sbjct 6224 ACAUAUCCAAGAGCGUGUAGGGAAACUAGAGGC--UAUAUUAGGAUUUUUGUAGAGGUUUCUUGCAAGAGUGGUCU---UGCCUAAUCC 6307 Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC 119 || | ||| |||| |||| | || | || Sbjct 6308 GCCCAUUCCAUAAAUGGAGACGAC---GCUUCAAC 6339 >> URS00023612CA_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC003118) E-value: 2.6e+3 Identity: 58.72% Query coverage: 48.42% Gaps: 6.42% Alignment: Query 23 GUAAACAAGAGGGACCAAAUUUUAAAUUUAG--GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCC 109 | ||| | || |||| ||| | || ||| | | || ||| ||||| |||| || | | | ||| | | | ||| |||| Sbjct 9074 GGAAAAAUGAAGGACAAAAGUCAAAUUUUCGGGGAAAAGGGCUGGGGCGUCGCGCUAGCCAGCGCGCCCUAGAAGGGACUCUGAGGUCC 9162 Query 110 ACUCUCCCACUUGGGGAGAU 129 | ||||||| | | Sbjct 9163 AGC-----CCUUGGGGCGGU 9177 >> URS00023616BB_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004359) E-value: 2.6e+3 Identity: 56.45% Query coverage: 52.94% Gaps: 12.10% Alignment: Query 3 ACUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUU-----AGGUAAUUGGCAGGGGCCGCGCGAACGCGUA--CC 84 || |||| ||| || |||| | |||| ||||| | ||| | ||| |||| | ||| | | | || || || Sbjct 2991 ACAUAUCCAAGAGCGUGUAGGGAAACUAGAGGC--UAUAUUAGGAUUUUUGUAGAGGUUUCUUGCAAGAGUGGUCU---UGCCUAAUCC 3074 Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC 119 || | ||| |||| |||| | || | || Sbjct 3075 GCCCAUUCCAUAAAUGGAGACGAC---GCUUCAAC 3106 >> URS000238B549_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004357) E-value: 2.6e+3 Identity: 56.45% Query coverage: 52.94% Gaps: 12.10% Alignment: Query 3 ACUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUU-----AGGUAAUUGGCAGGGGCCGCGCGAACGCGUA-- 82 || |||| ||| || |||| | |||| ||||| | ||| | ||| |||| | ||| | | | || || Sbjct 26748 ACAUAUCCAAGAGCGUGUAGGGAAACUAGAGGC--UAUAUUAGGAUUUUUGUAGAGGUUUCUUGCAAGAGUGGUCU---UGCCUAAU 26829 Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC 119 || || | ||| |||| |||| | || | || Sbjct 26830 CCGCCCAUUCCAUAAAUGGAGACGAC---GCUUCAAC 26863 >> URS000239025D_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004357) E-value: 2.6e+3 Identity: 56.45% Query coverage: 52.94% Gaps: 12.10% Alignment: Query 3 ACUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUU-----AGGUAAUUGGCAGGGGCCGCGCGAACGCGUA--CC 84 || |||| ||| || |||| | |||| ||||| | ||| | ||| |||| | ||| | | | || || || Sbjct 6088 ACAUAUCCAAGAGCGUGUAGGGAAACUAGAGGC--UAUAUUAGGAUUUUUGUAGAGGUUUCUUGCAAGAGUGGUCU---UGCCUAAUCC 6171 Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC 119 || | ||| |||| |||| | || | || Sbjct 6172 GCCCAUUCCAUAAAUGGAGACGAC---GCUUCAAC 6203 >> URS00023937F4_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004359) E-value: 2.6e+3 Identity: 56.45% Query coverage: 52.94% Gaps: 12.10% Alignment: Query 3 ACUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUU-----AGGUAAUUGGCAGGGGCCGCGCGAACGCGUA--CC 84 || |||| ||| || |||| | |||| ||||| | ||| | ||| |||| | ||| | | | || || || Sbjct 2987 ACAUAUCCAAGAGCGUGUAGGGAAACUAGAGGC--UAUAUUAGGAUUUUUGUAGAGGUUUCUUGCAAGAGUGGUCU---UGCCUAAUCC 3070 Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC 119 || | ||| |||| |||| | || | || Sbjct 3071 GCCCAUUCCAUAAAUGGAGACGAC---GCUUCAAC 3102 >> URS00023C5E9D_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004358) E-value: 2.6e+3 Identity: 56.45% Query coverage: 52.94% Gaps: 12.10% Alignment: Query 3 ACUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUU-----AGGUAAUUGGCAGGGGCCGCGCGAACGCGUA-- 82 || |||| ||| || |||| | |||| ||||| | ||| | ||| |||| | ||| | | | || || Sbjct 26578 ACAUAUCCAAGAGCGUGUAGGGAAACUAGAGGC--UAUAUUAGGAUUUUUGUAGAGGUUUCUUGCAAGAGUGGUCU---UGCCUAAU 26659 Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC 119 || || | ||| |||| |||| | || | || Sbjct 26660 CCGCCCAUUCCAUAAAUGGAGACGAC---GCUUCAAC 26693 >> URS000241ABD1_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004357) E-value: 2.6e+3 Identity: 56.45% Query coverage: 52.94% Gaps: 12.10% Alignment: Query 3 ACUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUU-----AGGUAAUUGGCAGGGGCCGCGCGAACGCGUA-- 82 || |||| ||| || |||| | |||| ||||| | ||| | ||| |||| | ||| | | | || || Sbjct 17490 ACAUAUCCAAGAGCGUGUAGGGAAACUAGAGGC--UAUAUUAGGAUUUUUGUAGAGGUUUCUUGCAAGAGUGGUCU---UGCCUAAU 17571 Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC 119 || || | ||| |||| |||| | || | || Sbjct 17572 CCGCCCAUUCCAUAAAUGGAGACGAC---GCUUCAAC 17605 >> URS00001551AC_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 2.7e+3 Identity: 60.24% Query coverage: 36.65% Gaps: 8.43% Alignment: Query 76 ACGCGUA--CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCA 156 |||| ||||| |||||||| ||| || || | | ||| | | ||| | ||| || | |||||| | || Sbjct 16 ACGCAGUCCCCCCCACUACCACAGAUUUUGCGGUUAAAUUUCCUUCAUUGGG-----GAAAAUCACAGGAGUCACCAUAUUCA 93 >> URS0000804D9D_61180 Oesophagostomum dentatum partial U1 spliceosomal RNA E-value: 2.7e+3 Identity: 66.23% Query coverage: 33.48% Gaps: 6.49% Alignment: Query 147 ACCAAGUGCAAUGUGAGCCAUUG---AUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 | |||||||||||| | | | ||| ||| | || |||||||||||| | ||| |||||||||| Sbjct 64 AUAAAGUGCAAUGUGCGGGACUCACCAUGGAGGUCCCG--CCUUCUUGAUCGCGAGAGCCUCCCAGCCAGGUAAGUU 138 >> URS00023B3C8B_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC003226) E-value: 2.8e+3 Identity: 60.98% Query coverage: 37.10% Gaps: 9.76% Alignment: Query 104 ACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCC 185 | |||||| |||| ||||||| || || | | | |||| | || | ||||| || |||||| | || | Sbjct 16782 UCCUCCACUAUCCCCCUUGGGGCUUUGAUAGAGCGAUCCGCU----AGUUGGAGUGUGAUCCU----AGUAGGCUUCAGCUC 16855 >> URS0000CCEB5D_10116 Rattus norvegicus uncharacterized LOC108352770 E-value: 2.8e+3 Identity: 70.59% Query coverage: 23.08% Gaps: 3.92% Alignment: Query 98 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCAC 148 ||| | |||||||||| |||| | | || |||||||||| | ||| Sbjct 1050 AUUUU--GGUCCACUCUCUUACUUUAGUAUCUGUUAAACCAACGUGUUCAU 1098 >> URS0000D02D59_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.9e+3 Identity: 61.97% Query coverage: 31.67% Gaps: 15.49% Alignment: Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCAC-CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUU 187 |||| |||| |||||| |||| | ||| | |||||| |||||| | | | |||| || Sbjct 1040 GGUUGGCGAGAAGGUAAAACAACAACCCCACACGAGUGCACUGUGAGACCUAAA----------GGCCUUU 1100 >> URS0002367C7C_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004039) E-value: 2.9e+3 Identity: 60.19% Query coverage: 45.70% Gaps: 8.74% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 ||||||||| | ||| | || ||| || || ||| ||||| |||| || | ||| | | | | | ||| || Sbjct 161132 AAACAAGAGAGG--AAAAUCAAAUUUUUGGGGAAAAGGGCUGGGGCGUCGCGCCAGCUAGCGCCCCCCAAAAAGGACUCUGAAGU 161214 Query 108 CCACUCUCCCACUUGGGG 125 ||| | ||||||| Sbjct 161215 CCAGCC-----CUUGGGG 161227 >> URS000237B06F_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004039) E-value: 2.9e+3 Identity: 60.19% Query coverage: 45.70% Gaps: 8.74% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCC 109 ||||||||| | ||| | || ||| || || ||| ||||| |||| || | ||| | | | | | ||| |||| Sbjct 32052 AAACAAGAGAGG--AAAAUCAAAUUUUUGGGGAAAAGGGCUGGGGCGUCGCGCCAGCUAGCGCCCCCCAAAAAGGACUCUGAAGUCC 32136 Query 110 ACUCUCCCACUUGGGG 125 | | ||||||| Sbjct 32137 AGCC-----CUUGGGG 32147 >> URS00023942F2_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004039) E-value: 2.9e+3 Identity: 60.19% Query coverage: 45.70% Gaps: 8.74% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 ||||||||| | ||| | || ||| || || ||| ||||| |||| || | ||| | | | | | ||| || Sbjct 266416 AAACAAGAGAGG--AAAAUCAAAUUUUUGGGGAAAAGGGCUGGGGCGUCGCGCCAGCUAGCGCCCCCCAAAAAGGACUCUGAAGU 266498 Query 108 CCACUCUCCCACUUGGGG 125 ||| | ||||||| Sbjct 266499 CCAGCC-----CUUGGGG 266511 >> URS000239D408_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004039) E-value: 2.9e+3 Identity: 60.19% Query coverage: 45.70% Gaps: 8.74% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 ||||||||| | ||| | || ||| || || ||| ||||| |||| || | ||| | | | | | ||| || Sbjct 210915 AAACAAGAGAGG--AAAAUCAAAUUUUUGGGGAAAAGGGCUGGGGCGUCGCGCCAGCUAGCGCCCCCCAAAAAGGACUCUGAAGU 210997 Query 108 CCACUCUCCCACUUGGGG 125 ||| | ||||||| Sbjct 210998 CCAGCC-----CUUGGGG 211010 >> URS00023A6FA5_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004039) E-value: 2.9e+3 Identity: 60.19% Query coverage: 45.70% Gaps: 8.74% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 ||||||||| | ||| | || ||| || || ||| ||||| |||| || | ||| | | | | | ||| || Sbjct 266416 AAACAAGAGAGG--AAAAUCAAAUUUUUGGGGAAAAGGGCUGGGGCGUCGCGCCAGCUAGCGCCCCCCAAAAAGGACUCUGAAGU 266498 Query 108 CCACUCUCCCACUUGGGG 125 ||| | ||||||| Sbjct 266499 CCAGCC-----CUUGGGG 266511 >> URS00023A89EB_4155 Erythranthe guttata (spotted monkey flower) long non-coding RNA (EGUT_LNC000035) E-value: 2.9e+3 Identity: 57.84% Query coverage: 42.08% Gaps: 8.82% Alignment: Query 26 AACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUAC----CCCCUCUACCACAAAUUAUGACGUC 108 ||| | | |||||| ||||||| | ||| ||| |||| | | || || | || | ||| ||| | | || Sbjct 61953 AACGCGGGAGACCAAGUUUUAAAAUAUUUAAAUAGGCGGGGGUAGGGUGAUUUGGUCCAAAGCCUUACCGCCAUUAAUCACAAAAUC 62039 Query 109 CAC-----UCUCCCA 118 ||| ||||||| Sbjct 62040 CACGUAAUUCUCCCA 62054 >> URS00023B7B5D_3659 Cucumis sativus (cucumber) long non-coding RNA (CSAT_LNC000255) E-value: 2.9e+3 Identity: 61.82% Query coverage: 24.89% Gaps: 7.27% Alignment: Query 45 UAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAU 99 | |||||| ||| |||| ||| ||| || | ||||| ||| | | | Sbjct 13460 UGAAUUUA----UGUGGUUGGGGAUGCGUGAAUGCAUGCCCCCACUAUCCUCAUU 13510 >> URS00023C54C8_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004039) E-value: 2.9e+3 Identity: 60.19% Query coverage: 45.70% Gaps: 8.74% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 ||||||||| | ||| | || ||| || || ||| ||||| |||| || | ||| | | | | | ||| || Sbjct 145850 AAACAAGAGAGG--AAAAUCAAAUUUUUGGGGAAAAGGGCUGGGGCGUCGCGCCAGCUAGCGCCCCCCAAAAAGGACUCUGAAGU 145932 Query 108 CCACUCUCCCACUUGGGG 125 ||| | ||||||| Sbjct 145933 CCAGCC-----CUUGGGG 145945 >> URS00023F1802_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004039) E-value: 2.9e+3 Identity: 60.19% Query coverage: 45.70% Gaps: 8.74% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 ||||||||| | ||| | || ||| || || ||| ||||| |||| || | ||| | | | | | ||| || Sbjct 145849 AAACAAGAGAGG--AAAAUCAAAUUUUUGGGGAAAAGGGCUGGGGCGUCGCGCCAGCUAGCGCCCCCCAAAAAGGACUCUGAAGU 145931 Query 108 CCACUCUCCCACUUGGGG 125 ||| | ||||||| Sbjct 145932 CCAGCC-----CUUGGGG 145944 >> URS00023FCCCC_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004039) E-value: 2.9e+3 Identity: 60.19% Query coverage: 45.70% Gaps: 8.74% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 ||||||||| | ||| | || ||| || || ||| ||||| |||| || | ||| | | | | | ||| || Sbjct 266416 AAACAAGAGAGG--AAAAUCAAAUUUUUGGGGAAAAGGGCUGGGGCGUCGCGCCAGCUAGCGCCCCCCAAAAAGGACUCUGAAGU 266498 Query 108 CCACUCUCCCACUUGGGG 125 ||| | ||||||| Sbjct 266499 CCAGCC-----CUUGGGG 266511 >> URS000240E833_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC004039) E-value: 2.9e+3 Identity: 60.19% Query coverage: 45.70% Gaps: 8.74% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUU--AGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 ||||||||| | ||| | || ||| || || ||| ||||| |||| || | ||| | | | | | ||| || Sbjct 153132 AAACAAGAGAGG--AAAAUCAAAUUUUUGGGGAAAAGGGCUGGGGCGUCGCGCCAGCUAGCGCCCCCCAAAAAGGACUCUGAAGU 153214 Query 108 CCACUCUCCCACUUGGGG 125 ||| | ||||||| Sbjct 153215 CCAGCC-----CUUGGGG 153227 >> URS0002411FEB_4155 Erythranthe guttata (spotted monkey flower) long non-coding RNA (EGUT_LNC000035) E-value: 2.9e+3 Identity: 57.84% Query coverage: 42.08% Gaps: 8.82% Alignment: Query 26 AACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUAC----CCCCUCUACCACAAAUUAUGACGUC 108 ||| | | |||||| ||||||| | ||| ||| |||| | | || || | || | ||| ||| | | || Sbjct 37385 AACGCGGGAGACCAAGUUUUAAAAUAUUUAAAUAGGCGGGGGUAGGGUGAUUUGGUCCAAAGCCUUACCGCCAUUAAUCACAAAAUC 37471 Query 109 CAC-----UCUCCCA 118 ||| ||||||| Sbjct 37472 CACGUAAUUCUCCCA 37486 >> URS0000EFA4F7_5851 Plasmodium knowlesi strain H snRNA U1 E-value: 3e+3 Identity: 56.92% Query coverage: 57.92% Gaps: 1.54% Alignment: Query 92 CCACAAAUUAUGACGUCCACU-CUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCA-CCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCAC 180 || ||||| || || | || ||| ||| || || || | | ||| | ||||||||| | || || |||| Sbjct 32 GCAAAAAUUUUGCUGUUAGCACCUUCCAUGUGGAAAGUCUAUAGCUCAUCACAGUCAGCUGAGUGCAAUGCUCUGCUCCGAACUACGCCAG 122 Query 181 GGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 || ||| ||| | || || | |||||||||| Sbjct 123 GGUAAUUCGUGAGCUACCCCAAACGACAGCCAGGUAAGU 161 >> URS000237AA87_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC002974) E-value: 3e+3 Identity: 52.46% Query coverage: 54.75% Gaps: 18.85% Alignment: Query 32 AGGGACCAAAUUUUAAAUUUAG-GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 |||| |||| | | |||| || ||| || |||| | ||| | | |||||| || Sbjct 194878 AGGGUGCAAACCUCGAGAUUAGCGUUUUUGUCA-UUCCCGCAC---------------------CAACUCGUCGAGUCCACCUUC 194940 Query 116 CCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 | ||| || ||| |||| | || |||| ||||| Sbjct 194941 CGACUCGGCGAGUUGGUCACUUAAUUCGCUACCCAAG 194977 >> URS000240D3BA_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC002974) E-value: 3e+3 Identity: 52.46% Query coverage: 54.75% Gaps: 18.85% Alignment: Query 32 AGGGACCAAAUUUUAAAUUUAG-GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 |||| |||| | | |||| || ||| || |||| | ||| | | |||||| || Sbjct 238981 AGGGUGCAAACCUCGAGAUUAGCGUUUUUGUCA-UUCCCGCAC---------------------CAACUCGUCGAGUCCACCUUC 239043 Query 116 CCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAG 152 | ||| || ||| |||| | || |||| ||||| Sbjct 239044 CGACUCGGCGAGUUGGUCACUUAAUUCGCUACCCAAG 239080 >> URS00009B7661_10090 Mus musculus long non-coding RNA NONMMUT070508.2 E-value: 3.1e+3 Identity: 67.24% Query coverage: 26.24% Gaps: 1.72% Alignment: Query 69 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA 126 | | |||||| ||| | |||||||||| || || || || |||| | | ||| Sbjct 938 AGUGUGAACGCAAACCAUCACUACCACAAACUACGAAGUGG-CUUUCCCUCAUUUGGA 994 >> URS000195528A_158456 Betta splendens (Siamese fighting fish) lncRNA (ENSBSLG00000010615.1) E-value: 3.1e+3 Identity: 61.67% Query coverage: 27.15% Gaps: 0.00% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCC 109 | || || || | | | ||| | | | ||||||||| |||| |||||||| Sbjct 152 AUGGGAAACUGUGUGUUGUCAGAGGAAGCCCUUUCUCCUCUACCAGAAAUCAUGACGUCA 211 >> URS0002102639_1709941 fungal sp. partial internal transcribed spacer region E-value: 3.1e+3 Identity: 66.23% Query coverage: 33.94% Gaps: 2.60% Alignment: Query 6 UAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAA-AUUUUAAAUUUAGGUAAUUGGCAGG-GGCCGCGCGAACGCG 80 || ||| | | ||| || ||| | || | | ||| ||| ||| ||||| | || || |||||||||||| Sbjct 7 UAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUAAAAAAUUAAUGAAUUGUCGGGGGGGCGCGCGAACGCG 83 >> URS00023B8282_42345 Phoenix dactylifera (date palm) long non-coding RNA (PDAC_LNC001036) E-value: 3.1e+3 Identity: 60.87% Query coverage: 31.22% Gaps: 8.70% Alignment: Query 98 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCA 166 ||||||| ||||||| |||| ||| | ||| ||| ||| | | | |||| ||| | Sbjct 8324 UUUAUGACUUCCACUCAACCACAUGGAGGGAUACUAAGUCAAG------AUCUAAUGCAGAGUGGACGC 8386 >> URS0000476A03_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.2e+3 Identity: 59.57% Query coverage: 42.08% Gaps: 3.19% Alignment: Query 71 CGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC-UUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG 159 | | ||| | ||||| ||| ||||| |||| || | | ||| | || ||| || | || | |||||||||||| Sbjct 11 CACAAACACAGUCCCCCACUAUCACAAUUUAUAUAGUGGAGUUUCCUGCACUGAGGAAAUCAUUGGUCAG--CAUAUCCCAAGUGCAAUG 98 Query 160 UGAG 163 || Sbjct 99 GAAG 102 >> URS0000CFA175_9598 Pan troglodytes (chimpanzee) retained intron E-value: 3.2e+3 Identity: 62.16% Query coverage: 31.67% Gaps: 5.41% Alignment: Query 89 CUACCACAAAUUAUGACGUCCA----CUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAU 158 | | | ||| ||| | ||| ||| |||||||| |||||| || ||| | | |||| | | ||| Sbjct 3564 GUCCAAGAAAAAAUGCCAGCCACGUCCUCCGCCACUUGGAGAGAUGAGAACCCAGUGGGGUCACGUAAAGGAAU 3637 >> URS0000026CD2_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.3e+3 Identity: 55.91% Query coverage: 42.08% Gaps: 2.15% Alignment: Query 72 GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUG 161 || || | ||| | ||||||||||| ||| | || |||| | | ||| || | || ||||||||||| Sbjct 10 GCUAAUACAGUCCCUCACUACCACAAAUCAUGGAAGUUUCCUAUGUACGUGGGAAUCUCAGGGGCCA--GCACAUCCCGAGUGCAAUGUG 97 Query 162 AGC 164 | Sbjct 98 UGA 100 >> URS0000097901_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.3e+3 Identity: 71.11% Query coverage: 20.36% Gaps: 0.00% Alignment: Query 69 CGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC 113 || ||| || |||| ||||||||||||||| ||| | || Sbjct 8 AGCUUGAAUGCAGUUCCCCACUACCACAAAUUAUGCAGUCGAGUC 52 >> URS000026CF63_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.3e+3 Identity: 54.09% Query coverage: 68.33% Gaps: 8.18% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG 159 || | || || |||| || || |||||||| ||| | | ||| | | | ||| || | | | ||| || | || | Sbjct 10 GCACAAAUGCAGUUCCCCACUGCCUCAAAUUAUACAGUCAAGUUUCCUGCAUUUGCAGA-----AAUCUCGGGGGUCAGCACAUCCAGAG 94 Query 160 UGAGCCAUUGAUG--------UAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || || | | | || | ||||| ||||| ||||| |||| |||||| Sbjct 95 UGCAACAGAUAAGUCUUACCCUGGGAAAACCACCUUCAUGAUCACAGUAUCACCCCUGCCAGUUAAGUA 163 >> URS0002400068_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC005232) E-value: 3.4e+3 Identity: 56.84% Query coverage: 42.99% Gaps: 11.58% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC 111 ||| |||||| | |||| ||| | ||| |||||||| | | || ||| | ||| ||| | || | Sbjct 61826 AAAAAAGAGGAAACAAAAUUUCA----------GUGGGGUGGGCCGCGUUUAUGUAAACACCCGCAACCGCAAGUGAUCUAAAC-CU 61901 Query 112 UCUCCCAC 119 ||||| || Sbjct 61902 UCUCCAAC 61909 >> URS0000154051_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.6e+3 Identity: 58.02% Query coverage: 36.65% Gaps: 6.17% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 | || || | || | || ||||||||| || || | | ||||| | || | |||||| | | | ||| Sbjct 10 GUGCCAAUUCAGUCCUUCACUGCCACAAAUUGUGCAGUUGAAUUUCCCAUGUCUGG-----GGAAACCAUGGGGGGCCCCA 85 >> URS000194E19F_299321 Denticeps clupeoides (denticle herring) lncRNA (ENSDCDG00000017370.1) E-value: 3.6e+3 Identity: 57.41% Query coverage: 46.61% Gaps: 4.63% Alignment: Query 58 UUGGCAGGGGCCGCGCGAAC-GCGUACCCCCUCUACCA-CAAAUUAUGACGUCCACUC---UCCCACUUGGGGAGAUGGUAAACCAA 139 | ||||||| || || | | ||| | | || | || | |||| || || ||| ||||| || | | | Sbjct 1787 UAGGCAGGGAUCGACGGACCAGAGUAUUUCACUCAUCAGAAGAUGAAGACGACCCCUUGAGCUACACCUGGGGUGAGAUGGAUCUGA 1873 Query 140 CGCGCUCACCAAGUGCAAUGU 160 | ||||| |||||||||| Sbjct 1874 AGAGCUCAGCAAGUGCAAUUG 1894 >> URS000236288E_88036 Selaginella moellendorffii (S. moellendorffii) long non-coding RNA (SMOE_LNC000321) E-value: 3.6e+3 Identity: 69.64% Query coverage: 24.89% Gaps: 1.79% Alignment: Query 71 CGCGAACGCGUACCCCC-UCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 125 ||| ||||| ||| | || ||| ||| || ||||||||||| ||| | || Sbjct 72674 UGCGUACGCGAGCCCUCAACUUCCAAAAACUACGACGUCCACUCCUCCAGACGCGG 72729 >> URS0002367DD2_4513 Hordeum vulgare (H. vulgare) long non-coding RNA (HVUL_LNC004169) E-value: 3.6e+3 Identity: 51.91% Query coverage: 76.02% Gaps: 12.02% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUC 115 || | ||||||| ||||| ||||| |||| |||| ||| | || ||| | | | || | |||| | | | ||| Sbjct 25 UAAGAUGAGGGACUAAAUUGUAAAU-UAGGCAAUUCACAGUUAAUUGACAAAUUCGUCGCAAGUGCAACAAACAUUAAUGGGCCGAAUCUG 114 Query 116 CCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUG---------------UAGGCCACGGCCCUUCUUG 191 |||| | | ||| | || ||| ||| | ||| | | || | | | ||| |||||||| | | Sbjct 115 ----GUGGGCAAACCUUAAUGUA--GCAUGCACUAAGCGUAAUAUAAAGAAUGGUAGUGGGGAGUUCACCCAUGGGCUUCGGCCCUUUUGG 199 Query 192 A 192 Sbjct 200 C 200 >> URS00002583EA_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 3.8e+3 Identity: 63.77% Query coverage: 30.32% Gaps: 2.90% Alignment: Query 63 AGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAU 129 |||| || ||| || | | ||||||||||||||| || | | ||| || ||||||| Sbjct 3 AGGGAGAGCAUGAAUGCCAUUUCUCACUACCACAAAUUAUGUAGUUGAGUUUCCUGUGUUUAGGGAGAU 71 >> URS00023D26F0_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC010980) E-value: 3.8e+3 Identity: 60.26% Query coverage: 35.29% Gaps: 8.97% Alignment: Query 113 CUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUU 190 | ||| | ||| | ||||| | ||| | | ||||||| | | || ||||| ||||| ||||| | Sbjct 27119 UUUCCAUUAGGGAACAUGGUGAUGCAAUGUUAUUCCCAAGUGAACUUAUAGACAUUG-------CCACGACCCUUGUG 27189 >> URS00023E8AF2_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC010981) E-value: 3.8e+3 Identity: 60.26% Query coverage: 35.29% Gaps: 8.97% Alignment: Query 113 CUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUU 190 | ||| | ||| | ||||| | ||| | | ||||||| | | || ||||| ||||| ||||| | Sbjct 22242 UUUCCAUUAGGGAACAUGGUGAUGCAAUGUUAUUCCCAAGUGAACUUAUAGACAUUG-------CCACGACCCUUGUG 22312 >> URS0000801356_338471 Ronderosia bergi partial U1 E-value: 3.9e+3 Identity: 58.99% Query coverage: 60.18% Gaps: 6.47% Alignment: Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGA- 170 || |||||| |||||||| | | | ||||| | |||| || | | || | | |||||||||| || | | Sbjct 6 CCGGCUACCAAAAAUUAUGCGCCCGAGUUACCCACAUUAGGGGUAAUCGCAGGGGUCAGCUCGAUCGAAGUGCAAUGAAAGAGCCUCAC 94 Query 171 --UGUAGGCCACGGCCCUUCUUGAUCG-GCCGUCGACCCCGUCCAGGUAA 217 || ||| || ||||| ||||| | ||| || |||||||| Sbjct 95 CCUGGAGGAACCG--CCUUCGUGAUCACGGUGUCCCCCA-CGCCAGGUAA 141 >> URS00009D1B9C_3981 Hevea brasiliensis miscellaneous RNA E-value: 3.9e+3 Identity: 56.52% Query coverage: 61.54% Gaps: 3.62% Alignment: Query 32 AGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 122 |||||| || || | | | || | || | || | ||| |||||| |||| | || | || | ||| |||||| Sbjct 444 AGGGACUUCAUCUUGUACUGGAGGAACUCUCAUAGACCACAAGAAUCUGUACCCACUCUGCUCCAGACCGAGAGCU-AUUUCUUUCACUUG 533 Query 123 GGGAGAUGGUAAA--CCAACGCGCUCACCAAGUGCAAUGUGAGCCAU 167 | || || |||| || ||||| | || ||| | |||| Sbjct 534 G-GAUAUACUAAAUGCCCCUGCGCUUCCAAAACACAA-GAACGCCAC 578 >> URS0002394852_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC003751) E-value: 4e+3 Identity: 61.97% Query coverage: 32.13% Gaps: 7.04% Alignment: Query 91 ACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUG 161 ||| |||| ||||| | || | || |||| ||| | |||| | || ||| | || ||||| Sbjct 59280 ACCCUAAAUCAUGACUUUUGCUUUUCCUUUUGGUUAGAAAGAAAACAAGCGUGCUAA-----GGCUAUGUG 59345 >> URS00023FA32D_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC009274) E-value: 4e+3 Identity: 56.35% Query coverage: 55.66% Gaps: 6.35% Alignment: Query 27 ACAAGAGGGACCAAAUUUUAAAUUUAG--GUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCAC 111 | | ||||| ||| | || ||| | | || ||| ||||| |||| || | ||| | | | | | ||| ||||| Sbjct 41883 AAAUUAGGGAGAAAAGUCGAAUUUUCGGGGAAAAGGGCUGGGGCGUCGCGCCAGCCAGCGCCCCCCAAAAGGGACUCUGAAGUCCAG 41969 Query 112 UCUCCCACUUGGGGAGAUG-GUAAACCAACGCGCUCACC 149 ||||||| | | | | ||| |||| || Sbjct 41970 C-----CCUUGGGGCGGCGCGCCUAGCAAAGCGCCCAGU 42003 >> URS0000129C73_4896 Schizosaccharomyces pombe (fission yeast) non-coding RNA E-value: 5.1e+3 Identity: 51.16% Query coverage: 57.47% Gaps: 1.55% Alignment: Query 22 AGUAAACAAGAGGGACCAAAUUU--UAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCA 110 || | |||| | | || | | |||| |||| | || ||| || | |||| | | ||| | ||||| || Sbjct 44 AGGAUCCAAGGAGAGCUUCCCUUGCCAUUUAUAGGAAAUUUGAAGAGGCACAGCCAUGCCGUAUCGCUCUCUCCAGACAUUAUUGCGAUGU 134 Query 111 CUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCAC 148 | | | | ||| | |||| | ||||| | Sbjct 135 CCCGACUAAUUGAAAAUGAUGUAAUUAAGCGCGCAGAG 172 >> URS0000597466_7264 Drosophila buzzatii U1 snRNA E-value: 5.4e+3 Identity: 58.43% Query coverage: 71.04% Gaps: 7.83% Alignment: Query 64 GGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGA--GAUGGUAAA--CCAACGCGCUCACCA 150 ||| | |||||||||| ||| |||||| |||||| | | | ||| | ||| || | | | |||| | | | Sbjct 3 GGGACGGCGCGAACGCCAUUCCCGGCUACCAAAAAUUACACGCACGAGUUAUUCACAUUAGGAAUAAUCGCAGAGGUCAACUCAG-CCGAA 92 Query 151 AGUGCAAUGU--GAGCCAUU-GAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCG--UCCAGGUAAGUA 220 ||||||||| |||| | ||| | ||||| ||||| | || ||| | ||||||||||| Sbjct 93 AGUGCAAUGACCAAGCCUCACUCCGGAGGAACC--GCCUUCGUGAUCA-CGGUUAACCUCUACGCCAGGUAAGUA 164 >> URS00000CD53F_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 4.7e+3 Identity: 58.06% Query coverage: 38.01% Gaps: 17.20% Alignment: Query 76 ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC--UCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA-------AGUGCA 156 || | || | ||||||||||||||| | | | | | ||| ||| ||| | || | | ||| || |||||| Sbjct 16 ACACAGUCCUGCACUACCACAAAUUAUGCCAUUGAGUUUAUUCCAUUUGAGGAAA-------ACACAGAGAUCAGCAUGUCAGAAGUGCA 98 Query 157 AUG 159 ||| Sbjct 99 AUG 101 >> URS00019BB59C_506608 Cinara cedri non-coding RNA E-value: 4.7e+3 Identity: 71.43% Query coverage: 22.17% Gaps: 2.04% Alignment: Query 56 AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGA 104 |||| |||| | |||||||||| ||| |||||| |||||| | Sbjct 105 AAUUUUUAGGGACGGCGCGAACGCAGU-CCCAGCUACCAAAAAUUACGU 152 >> URS00006184E4_9606 Homo sapiens long non-coding RNA NONHSAT089262.2 E-value: 6.2e+3 Identity: 60.56% Query coverage: 31.67% Gaps: 15.49% Alignment: Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCAC-CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUU 187 |||| |||| |||||| |||| | | | | |||||| |||||| | | | |||| || Sbjct 1040 GGUUGGCGAGAAGGUAAAACAACAACCCCGCACGAGUGCACUGUGAGACCUAAA----------GGCCUUU 1100 >> URS000198FB18_30521 Bos grunniens (domestic yak) lncRNA (ENSBGRG00000013488.1) E-value: 8.9e+3 Identity: 61.80% Query coverage: 40.27% Gaps: 2.25% Alignment: Query 20 UAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC 108 || | ||||| |||||| |||| ||| || | |||||| || | ||||| | | || |||||| | ||| ||| Sbjct 270 UAUGCAAACAGGAGGGAA-AAAUACUAAUGGUAACUCAUUGGCUGGAA-CAAACGAACUCCUUCCUUCUCUACAGCCUUCUAUUUUGUC 356 >> URS00019F1809_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.3e+4 Identity: 60.47% Query coverage: 38.46% Gaps: 4.65% Alignment: Query 92 CCACAAAUUAUGACGUC-CACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGG 176 |||| |||| || ||| || | | ||| | || |||+|||+| |||| | ||||||| ||||| | | | || Sbjct 1140 CCACCUGCCCUGACCUCUCACCCUGAAGCCUCAGGAAAGGGAAAAUCAAUGGGCUCCCGAAGUGCAG---GAGCCCAGGGUUUGGG 1222 >> URS00019DBDF5_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.3e+4 Identity: 60.47% Query coverage: 38.46% Gaps: 4.65% Alignment: Query 92 CCACAAAUUAUGACGUC-CACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGG 176 |||| |||| || ||| || | | ||| | || |||+|||+| |||| | ||||||| ||||| | | | || Sbjct 3548 CCACCUGCCCUGACCUCUCACCCUGAAGCCUCAGGAAAGGGAAAAUCAAUGGGCUCCCGAAGUGCAG---GAGCCCAGGGUUUGGG 3630 >> URS00019ABF37_3755 Prunus dulcis sRNA ncRNA E-value: 1.6e+4 Identity: 60.56% Query coverage: 30.32% Gaps: 5.63% Alignment: Query 76 ACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUC----UCCCACUUGGGGAGAUGGUAAACCAACGC 142 | | | | | ||| ||| | | || | ||| |||| | || || | | ||||| || | ||| | | Sbjct 1442 AGGAGAAGGCACUCCACCUCUAGUUCUUACGGCCACGCCCCCUCUCAUUGGAGGAGAAGGCACUCCACCUC 1512 >> URS000196CBA6_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005030605.1) E-value: 4.1e+3 Identity: 49.47% Query coverage: 83.71% Gaps: 17.55% Alignment: Query 4 CUUAUCAAAGGGCCUGUAAGUAAACAAG--AGGGACCAAAUUUUAAAUUUAGGUAAU-UGGCAGGGGCCGCGCGAACGCGUACCCCCUCUA 91 ||| |||||| | ||||||| || ||||| |||| | ||| | ||| | | | | || | Sbjct 148 CUUCUCAAAGCUACAGUAAGUAGUAGAGGCAGGGAUCAAACUC-------GGGUGUGAUUCCAGAGCCAG--CCAAGG------------- 216 Query 92 CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGG 182 || || | |||| |||||| | || | || || || | || |||| | || | ||| || || || | Sbjct 217 ------UCACUGCUAGCCUUCCCUCCACCUGGGGAAGAGCUAGAGAAAGGCACUUGCUCAGGGCAAGGACAGUCUCUGAAGU--GCAACAG 299 Query 183 CCCUUC 188 | ||| Sbjct 300 CACUUU 305 >> URS00019842CB_9054 Phasianus colchicus (Ring-necked pheasant) lncRNA (ENSPCLG00000017648.1) E-value: 7.7e+3 Identity: 54.87% Query coverage: 49.32% Gaps: 3.54% Alignment: Query 91 ACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU----GAGCCAUUGAUGUAG 175 ||||| ||| | | | | ||||| |||||| | | || | | |||| ||||||||| | | || || | Sbjct 1349 CCCACAGAUUUGCAGCUGUAUGCACCCACCUGGGGAAGAGAGACUUCAUCAACCAAACCAGGUGCAAUGUUGGUGCGACAACAAUAAGG 1437 Query 176 GCCACGGCCCUUCUUGAUCGGCCG 199 ||| | ||||| | | | | Sbjct 1438 CCCAGAGGUCUUCUGAAAUGUCUG 1461 >> URS00026DFC45_74358 Podarcis lilfordi non-coding RNA E-value: 1.2e+4 Identity: 59.48% Query coverage: 48.87% Gaps: 9.48% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG----GGGAGAUGGUAAACCAACGC---GCUCACCAAGUGCAAUGUGA 162 |||| | ||| ||| || |||| | ||||| | | | || ||| ||| | | ||||| ||| || Sbjct 32112 CCCCCCCCCCAAAAAAAAUAUAGUCCUGGCCCCCACAAGCUCUGAGGGACGGUGGACCGGCCCCCGGCUCAAAAAG---GUUGCUG 32194 Query 163 GCCAUUGAUGUAGGC-CACGGCCCUUCUUG 191 ||| |||| ||||| || ||||| |||| Sbjct 32195 GCCCCUGAUCUAGGCUCAUGGCCCCCCUUG 32224 >> URS000235F231_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC005353) E-value: 4.3e+3 Identity: 58.90% Query coverage: 33.03% Gaps: 0.00% Alignment: Query 127 GAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCG 199 ||| |||||||| | ||| | || | | || || | || | || | || ||||||| ||| Sbjct 150583 AGUGGCAAACCAACACACUCUCUAACCACGAGUUGUGCUACUGCUAUAAUGCUUGGAUCUUCUUGUCACGCCC 150655 >> URS000254CFF3_9606 Homo sapiens (human) ncRNA E-value: 6.2e+3 Identity: 60.56% Query coverage: 31.67% Gaps: 15.49% Alignment: Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCAC-CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUU 187 |||| |||| |||||| |||| | | | | |||||| |||||| | | | |||| || Sbjct 1042 GGUUGGCGAGAAGGUAAAACAACAACCCCGCACGAGUGCACUGUGAGACCUAAA----------GGCCUUU 1102 >> URS000237067B_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC010070) E-value: 3.6e+3 Identity: 52.03% Query coverage: 62.44% Gaps: 11.49% Alignment: Query 9 CAAAGGGCCUGUAAGUAAAC---AAGAGGGACCAA--AUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGA-----ACGCGUAC 83 ||||||| |||| | | | |||| || | ||| | || |||| | || || || | Sbjct 417342 CAAAGGGAAGGUAAAGAGGCUGAAGGAGGAACAUAACAUUCUUUAUAUAGGGCACAA-------CCCCGAGAUUAGAGUUUUUCU 417419 Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | | || || ||| || | | ||||| || ||| | ||| |||| | ||| ||| Sbjct 417420 CUCUUCAACACCAACUUGUCAAGUCCAACUACCGACUCGACGAGUUGGUCACUUAACUCGCGA 417482 >> URS0002404FD2_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC001302) E-value: 1.4e+4 Identity: 57.80% Query coverage: 48.42% Gaps: 4.59% Alignment: Query 100 UAUGACGUCCACUCUCCCACUUG--GGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCU 186 | || ||| |||| || || | |||||| | | | ||| ||||||| | || ||| || || ||||||| | Sbjct 2864 GAAGAAGUCGACUCGCCUCCUCGCAGGGAGAGGAGAUCCAAACACGCUCACGACCUGGCGAGUGCUCCGGACUUGGUGGCCACGCCGA- 2951 Query 187 UCUUGAUCGGCCGUCGACCC 206 ||| | | | |||| | Sbjct 2952 --UUGGACAGUCUUCGAAGC 2969 >> URS0002388746_226208 Salvia miltiorrhiza (S. miltiorrhiza) long non-coding RNA (SMIL_LNC006215) E-value: 2e+4 Identity: 75.00% Query coverage: 16.29% Gaps: 0.00% Alignment: Query 43 UUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACG 78 || | |||| |||||||| |||||| ||| ||| Sbjct 4004 UUAUAUUUUAUGUAAUUGGAUCGGGCCGGGCGGACG 4039 >> URS000236089D_4039 Daucus carota (carrot) long non-coding RNA (DCAR_LNC004950) E-value: 5.2e+3 Identity: 66.67% Query coverage: 21.72% Gaps: 0.00% Alignment: Query 40 AAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCC 87 || | ||||| || | || ||| | || |||| ||| | |||| | Sbjct 487 UAUAUAAAAUUAGGGAAUUUCGCACGCGCUUCGCGGACGAGGACCCUC 534 >> URS000237AF15_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC004983) E-value: 1.5e+4 Identity: 54.31% Query coverage: 52.04% Gaps: 1.72% Alignment: Query 31 GAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC 117 | ||| ||||| | | | | |||| | || | || ||| | | ||| | || || || || | | | ||| Sbjct 16595 AAUGGAUAAAAUUAAA-AAAAAUGGUAUUGAAAUGGUCUGCCUGAAACCUAGCUGCCUGUUGCAGAAGUUUGGAUGAUAAAUUUCCA 16680 Query 118 ACUUGGGGAGAUGGUAAAC-CAACGCGCU 145 || || | |||| | | | ||| || Sbjct 16681 ACCUGCGUUCAUGGCGAUCACUACGGACU 16709 >> URS00023EFA7A_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003352) E-value: 1.5e+4 Identity: 63.33% Query coverage: 27.15% Gaps: 0.00% Alignment: Query 4 CUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCA 63 | | ||||||| ||||| | |||| |||| | | |||| | | | |||||| Sbjct 7661 CCUUUCAAAGGACCUGUGGGAGAACAUCAGGGUCUUCCUACCAAAUCCAAGAACUUGGCA 7720 >> URS00023F1DBD_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC002562) E-value: 1.1e+4 Identity: 55.17% Query coverage: 39.37% Gaps: 9.20% Alignment: Query 95 CAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACG 181 || ||||||| | || | ||| |||| || ||||| | | | ||| |||| |||| | |||| || Sbjct 15839 AAAGUUAUGACAUUUUCUGU--------AUGAGGCAGUAAGCCGACGCGAUAGCAAUGUGACAUGUUGGCCAGCGCAUUAGGAAACU 15917 >> URS0002406C90_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC011958) E-value: 2.4e+4 Identity: 59.46% Query coverage: 28.51% Gaps: 14.86% Alignment: Query 43 UUUAAAUUUAGGUAA---UUGGCAGGGGCCGCGCGAACGCGUACCCCCUC--------UACCACAAAUUAUGAC 105 ||| |||| ||| | ||| | ||| | |||| ||| |||||| | | || |||| ||| | Sbjct 6155 UUUUAAUUAAGGAAUAUCUUGAAACGGGUCACGCGUACGUGUACCCAUUUGUUCGGCGCAUCAAAAAUCAUGUC 6228 >> URS000240B169_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC005889) E-value: 8.9e+3 Identity: 76.67% Query coverage: 13.57% Gaps: 0.00% Alignment: Query 56 AAUUGGCAGGGGCCGCGCGAACGCGUACCC 85 | ||||| | |||||||||||||||| Sbjct 1845 ACUUGGCCAAAGUCGCGCGAACGCGUACCU 1874 >> URS00023F6DE2_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC006355) E-value: 7.3e+3 Identity: 57.95% Query coverage: 38.46% Gaps: 10.23% Alignment: Query 7 AUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGG---CCGCGCGAACGCGUACCCCCU 88 | | |||| ||| || | |||||||||| | | |||| ||| |||||| | | | | | ||||| | Sbjct 287488 ACCUAAGGACCUUCUAGAAGGUAAGAGGGACCCA------UAGUUAGCUAAAGGGCAGGUCGACCAACCUACAUGUGGACCCCAU 287566 Query 89 CUA 91 ||| Sbjct 287567 CUA 287569 >> URS0002356103_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC011661) E-value: 1.1e+4 Identity: 76.60% Query coverage: 21.27% Gaps: 4.26% Alignment: Query 116 CCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGA 162 ||||| || ||| ||||||||||| | |||||||| ||||| | Sbjct 22776 UCACUU-GGAAGAAGGUAAACCAACACA-UCACCAAGAUCAAUGAUA 22820 >> URS00023ED1E4_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC015148) E-value: 4.2e+3 Identity: 53.21% Query coverage: 69.23% Gaps: 8.33% Alignment: Query 46 AAAUUUAGGUAAUUGGCAGGGGCCGCGCGAAC---GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUA 133 || || | | | || | ||| | || || | |||||| ||| ||||| |||| || ||||| | || | || | Sbjct 190 GAAGUUUGAUCACAUGCUGCCUCCGUGGGAGUCUAAGGUUCUCCCUCUUCCAAAAAUUCUGACCUCAACUCU-------GUGGUGUUGAAA 273 Query 134 AACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCC 198 | | | | ||| | | | | |||||||| || | ||||| ||| | | Sbjct 274 AUUGAGUG--UACCUCAA-UCUAUUUCGCCAUCUUGAUGUAAGCAAACUUCCUUCAAUAUCUGUC 335 >> URS0002375FE3_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC004706) E-value: 9.5e+3 Identity: 67.44% Query coverage: 19.46% Gaps: 0.00% Alignment: Query 98 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAAC 140 |||||| || | || | ||| |||||||||||| | | Sbjct 18021 AUUAUGUCGACUACAAUUCCAAUUGGGGAGAUGGCUAGUCUUA 18063 >> URS0002813B4D_35523 Daphnia pulicaria (Water flea) uncharacterized LOC124343916 E-value: 4.5e+3 Identity: 58.24% Query coverage: 41.18% Gaps: 14.29% Alignment: Query 8 UCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCAC 95 | || |||||| | | ||||| || |||| |||||||| | | | ||||||||| | |||| | | | Sbjct 1713 UAAAGGGGCCUAUGAAUAAACUAG--------AAUUCUAAAUUUAUUUUAAUUACAGGGGCCGGA-----GUGUACGGUGCGUUCAAA 1787 Query 96 AAA 98 ||| Sbjct 1788 AAA 1790 >> URS00023599BF_3694 Populus trichocarpa (black cottonwood) long non-coding RNA (PTRI_LNC001250) E-value: 1.3e+4 Identity: 58.23% Query coverage: 28.05% Gaps: 22.78% Alignment: Query 101 AUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA------CCAACGC-----------GCUCACCAAGUGCAAUGUGA 162 |||| | ||| ||| ||||||||| || | ||| | ||||| | ||||| | | ||| | || Sbjct 12344 AUGA-GGCCAUUCUUCCACUUGGGUAGGUUGUACAAUGAGACCAACAUUUUUUUGGGAAGGUCACCCAUUACAACGCGA 12421 >> URS000236802F_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC005593) E-value: 1e+4 Identity: 60.64% Query coverage: 39.82% Gaps: 10.64% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGC----GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC--CACUCUCCCACUU 121 ||||||| || | || ||||||||| ||| | ||||| | | || || ||| | | ||| || | ||||| | Sbjct 1224 CAAUUUUAGGUUCAAGUCAUUGGCAGGCGCCCACCUGGAGAACGAGGAAAU---UUAUUUCA-AUUUUAAAGUCAUCAGGCGCCCACCU 1308 Query 122 GGGGA 126 || || Sbjct 1309 GGAGA 1313 >> URS00021898EA_252671 Clytia hemisphaerica (Jellyfish) tRNA-Thr for anticodon CGU E-value: 2.2e+4 Identity: 69.64% Query coverage: 24.89% Gaps: 3.57% Alignment: Query 4 CUUAUCAAAGGGCCUGUA-AGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAU 58 | | |||| |||||| ||||||||||| ||| || || |||| | || | | Sbjct 15 GUGGUUAAAGCGCCUGUCUCGUAAACAAGAGA-ACCCAAGUUCAAAUCUGGGCAGU 69 >> URS0001F71BA3_410658 soil metagenome partial internal transcribed spacer 1 E-value: 1.2e+4 Identity: 55.56% Query coverage: 45.25% Gaps: 12.04% Alignment: Query 47 AAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCG--------UACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 127 || ||| ||||| | |||| |||||| ||||| ||| | | | | | ||||| | || || | | | Sbjct 2 AAAUUAAUGAAUUGUCGGGGGGCGCGCGGACGCGCGGAGGGUUACUUUUUUU--CCCUUCUCUGACCGUCCGCCGUCUUACCCGUGUAU 88 Query 128 AUGGUAAACCAACGCGCUC 146 |||||||| ||||| Sbjct 89 ---UCAAACCAACCCGCUC 104 >> URS00024072A7_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC028530) E-value: 5.6e+3 Identity: 74.51% Query coverage: 23.08% Gaps: 0.00% Alignment: Query 161 GAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCC 211 ||||||| ||| |||||| |||||| | || ||| || || | ||| || Sbjct 1546 GAGCCAUGGAUCCAGGCCAUGGCCCUCCCUGCUCGUCCCUCCAUCCCCUCU 1596 >> URS000241D450_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003352) E-value: 1.5e+4 Identity: 63.33% Query coverage: 27.15% Gaps: 0.00% Alignment: Query 4 CUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCA 63 | | ||||||| ||||| | |||| |||| | | |||| | | | |||||| Sbjct 5114 CCUUUCAAAGGACCUGUGGGAGAACAUCAGGGUCUUCCUACCAAAUCCAAGAACUUGGCA 5173 >> URS0002396B12_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC009109) E-value: 1.3e+4 Identity: 54.36% Query coverage: 65.61% Gaps: 12.08% Alignment: Query 21 AAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGC----GCGAACGCGUACCCCCUCUACCACAAAUUAUG 103 ||| ||||| |||| | | || |||||| |||||| || ||| | |||| | | | | |||||| || Sbjct 61440 AAGGUAACAAU-GGGAAUACAAUUCAAAUUUUGGUAAUCA---GGAGCCCACCUAGAGAACAAGGAA----UACAGUUCAAAUUUUG 61518 Query 104 ACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCC 165 | ||| | || || | | | | || || || | | |||||| ||| | Sbjct 61519 GCAACCAGGCGCCACCUGGAGAAUAAGGGAAUUCACUU------CAGAAUGCAAUUCGAGUC 61574 >> URS0002391982_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC015148) E-value: 4.2e+3 Identity: 53.21% Query coverage: 69.23% Gaps: 8.33% Alignment: Query 46 AAAUUUAGGUAAUUGGCAGGGGCCGCGCGAAC---GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUA 133 || || | | | || | ||| | || || | |||||| ||| ||||| |||| || ||||| | || | || | Sbjct 231 GAAGUUUGAUCACAUGCUGCCUCCGUGGGAGUCUAAGGUUCUCCCUCUUCCAAAAAUUCUGACCUCAACUCU-------GUGGUGUUGAAA 314 Query 134 AACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCC 198 | | | | ||| | | | | |||||||| || | ||||| ||| | | Sbjct 315 AUUGAGUG--UACCUCAA-UCUAUUUCGCCAUCUUGAUGUAAGCAAACUUCCUUCAAUAUCUGUC 376 >> URS0002830E12_1271730 Limnephilus marmoratus (Caddisflies) misc RNA ENSLMMG00005004704.1 E-value: 1e+4 Identity: 56.07% Query coverage: 48.42% Gaps: 6.54% Alignment: Query 73 CGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGU 160 |||| ||||| ||||| | | | | | ||| || ||| ||| ||| || ||| ||||||||| | Sbjct 60 UGAACCGUUACCCUUUCUACAAGCGGUCAAGC-----A-AGGACCAGUUCUGGAAAUGCAGCACCUCGGCAAUCAACAAGUGCAAGGC 141 Query 161 GAGCCAUUGAUGUAGGCCA 179 ||||| || || | | | Sbjct 142 GAGCCU-GGAAGUUGUCGA 159 >> URS00025C4697_61616 Pelobates cultripes (western spadefoot toad) non-coding RNA E-value: 5.2e+3 Identity: 55.43% Query coverage: 41.63% Gaps: 0.00% Alignment: Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACC 205 | |||||| || | | | | ||| ||| ||| |||||| | ||| || || |||| ||| | | |||| Sbjct 1432 UCACGGGGAGGAGGCGAUCAGCCUCUCUCCCCAGUAGCAGUGUGAGUUUCAGGGAGAGGAGACAACCGUUCUCUAUCCCCAGCUGACC 1519 Query 206 CCGU 209 || Sbjct 1520 CCAA 1523 >> URS000241CD28_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC001214) E-value: 1.2e+4 Identity: 59.09% Query coverage: 29.86% Gaps: 0.00% Alignment: Query 57 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 122 |+ ||| | | ||| ||||| || | | |||| | ||| || ||| ||||| ||| Sbjct 16994 ACAGGCGUGAGUCGCCGGAACGAAUAUCUUCGCUACUAGAAAAAGUGGCGUAAUCUCUCAGUUUUG 17059 >> URS00023941D1_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC010207) E-value: 1.3e+4 Identity: 56.41% Query coverage: 52.94% Gaps: 8.55% Alignment: Query 4 CUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCU 90 |||| | || | |||| | ||| ||| ||| | || | |||| |||||| | || ||| | | |||| Sbjct 84357 CUUAGAAUAGAACAUGUAGGCAAAUCAGAAGGAGCCAAAUAUAAA----AGUAAUUCUAA------GCUCGAUUUCUUGAACCCUGA 84433 Query 91 ACCACAAAUUAUGACGUCCACUCUCCCACU 120 |||| | ||| || |||| |||| Sbjct 84434 ACCAGAGAUUCUGGGUUCCAUAUCCCCAGC 84463 >> URS00024216E5_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC010070) E-value: 3.6e+3 Identity: 52.03% Query coverage: 62.44% Gaps: 11.49% Alignment: Query 9 CAAAGGGCCUGUAAGUAAAC---AAGAGGGACCAA--AUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGA-----ACGCGUAC 83 ||||||| |||| | | | |||| || | ||| | || |||| | || || || | Sbjct 417342 CAAAGGGAAGGUAAAGAGGCUGAAGGAGGAACAUAACAUUCUUUAUAUAGGGCACAA-------CCCCGAGAUUAGAGUUUUUCU 417419 Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 | | || || ||| || | | ||||| || ||| | ||| |||| | ||| ||| Sbjct 417420 CUCUUCAACACCAACUUGUCAAGUCCAACUACCGACUCGACGAGUUGGUCACUUAACUCGCGA 417482 >> URS0002397727_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC005593) E-value: 1e+4 Identity: 60.64% Query coverage: 39.82% Gaps: 10.64% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGC----GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC--CACUCUCCCACUUGG 123 ||||||| || | || ||||||||| ||| | ||||| | | || || ||| | | ||| || | ||||| ||| Sbjct 76 CAAUUUUAGGUUCAAGUCAUUGGCAGGCGCCCACCUGGAGAACGAGGAAAU---UUAUUUCA-AUUUUAAAGUCAUCAGGCGCCCACCUGG 162 Query 124 GGA 126 || Sbjct 163 AGA 165 >> URS000238B0D2_3046 Dunaliella salina (D. salina) long non-coding RNA (DSAL_LNC000236) E-value: 5.1e+3 Identity: 56.82% Query coverage: 58.82% Gaps: 4.55% Alignment: Query 92 CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA--UGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGG 176 || |||||| ||| ||| + ||| | | | || || | | ||| | |||||||||| |||| | | | Sbjct 21859 GCAAAAAUUAAACCGUGCACAUACCCCGUAGAGCAGUGCUGCUGG----AGCCGCAGCCAAAGUGCAAUGGGAGCAGCUCCAACAUG 21941 Query 177 CCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUAU 221 | | |||||| |||| | | | ||| ++|||||||||| Sbjct 21942 CGAACCCCCUUCGGGAUCAGGGUUACGCACCGGUUAGGUAAGUAU 21986 >> URS000241A219_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC000583) E-value: 1.5e+4 Identity: 63.33% Query coverage: 27.15% Gaps: 0.00% Alignment: Query 4 CUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCA 63 | | ||||||| ||||| | |||| |||| | | |||| | | | |||||| Sbjct 4719 CCUUUCAAAGGACCUGUGGGAGAACACCAGGGUCUUUCUACCAAAUCCAAGAACUUGGCA 4778 >> URS000032458F_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.3e+4 Identity: 55.21% Query coverage: 69.68% Gaps: 11.04% Alignment: Query 67 GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAU-----GGUAAACCAACGCGCUCACC 149 || |||| | ||||| || |||||| ||| || | | ||| | ||||||| | | | | || | || | Sbjct 7 AGAGCUUGAACACAGUCCCCCAAUAUUACAAAUAAUGCAGUUGAGUUUCCUGAAUUUGGGGAAGUCCCAGGAUUCAGCAUAUCUCUAAUG 96 Query 150 AAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUG--AUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || || ||| || || | | | | ||| |||| ||| || |||| ||||||||||| Sbjct 97 AAAUGG-AUGAGACUCACUCAGGGAAACCA-------ACUUGAGAUCAUGUAUCU-CCCCUGCCAGGUAAGUA 160 >> URS0002388299_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC010947) E-value: 1.6e+4 Identity: 74.07% Query coverage: 24.43% Gaps: 0.00% Alignment: Query 3 ACUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUA 56 |||| || || |||| |||| ||| |||| || || | ||||| ||||| || Sbjct 27420 ACUUUUCCAACAGCCUAUAAGGAAAGCAGAGAGAUCAUAAUUUAAUUUUAGUUA 27473 >> URS00024213C2_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC000584) E-value: 1.5e+4 Identity: 63.33% Query coverage: 27.15% Gaps: 0.00% Alignment: Query 4 CUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCA 63 | | ||||||| ||||| | |||| |||| | | |||| | | | |||||| Sbjct 2675 CCUUUCAAAGGACCUGUGGGAGAACACCAGGGUCUUUCUACCAAAUCCAAGAACUUGGCA 2734 >> URS00023AA3CF_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC015344) E-value: 5.6e+3 Identity: 75.00% Query coverage: 23.53% Gaps: 0.00% Alignment: Query 161 GAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCA 212 ||||||| ||| |||||| |||||| | || ||| || || | ||| || | Sbjct 18899 GAGCCAUGGAUCCAGGCCAUGGCCCUCCCUGCUCGUCCCUCCAUCCCCUCUA 18950 >> URS00009B9A1C_9606 Homo sapiens (human) HSALNT0053595 E-value: 6.2e+3 Identity: 60.56% Query coverage: 31.67% Gaps: 15.49% Alignment: Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCAC-CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUU 187 |||| |||| |||||| |||| | | | | |||||| |||||| | | | |||| || Sbjct 1195 GGUUGGCGAGAAGGUAAAACAACAACCCCGCACGAGUGCACUGUGAGACCUAAA----------GGCCUUU 1255 >> URS00023C659D_3885 Phaseolus vulgaris (P. vulgaris) long non-coding RNA (PVUL_LNC003353) E-value: 1.5e+4 Identity: 63.33% Query coverage: 27.15% Gaps: 0.00% Alignment: Query 4 CUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCA 63 | | ||||||| ||||| | |||| |||| | | |||| | | | |||||| Sbjct 4574 CCUUUCAAAGGACCUGUGGGAGAACAUCAGGGUCUUCCUACCAAAUCCAAGAACUUGGCA 4633 >> URS000234BD1C_4155 Erythranthe guttata (spotted monkey flower) long non-coding RNA (EGUT_LNC001494) E-value: 1.7e+4 Identity: 57.69% Query coverage: 46.61% Gaps: 7.69% Alignment: Query 23 GUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCAC-AAAUUAUGACGUC 108 | |||| || ||||||||| | ||||| | | || |||| | || ||| | | || | |||| || || Sbjct 19290 AUGAACAUGAUGGACCAAAUGUGAAAUUGUUGCUAAUGUGAGGGACUA----AAACUGUAUU---UGUCCCCCAAAAUAAUUCUUUC 19369 Query 109 CACUCUCCCACUUGGGG 125 ||| |||| || || Sbjct 19370 AACUUUCCCUCUGUUGG 19386 >> URS00023D8F11_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC001215) E-value: 1.2e+4 Identity: 59.09% Query coverage: 29.86% Gaps: 0.00% Alignment: Query 57 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 122 |+ ||| | | ||| ||||| || | | |||| | ||| || ||| ||||| ||| Sbjct 6212 ACAGGCGUGAGUCGCCGGAACGAAUAUCUUCGCUACUAGAAAAAGUGGCGUAAUCUCUCAGUUUUG 6277 >> URS0002357747_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC006351) E-value: 7e+3 Identity: 81.08% Query coverage: 16.74% Gaps: 0.00% Alignment: Query 30 AGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGG 66 |||| | ||||||| ||| |||||||||||||| | Sbjct 2034 AGAGAGCUCAAAUUUGAAAACUAGGUAAUUGGCAGAG 2070 >> URS00025F1DBF_9031 Gallus gallus (chicken) lncRNA (ENSGALG00010010653.1) E-value: 7.3e+3 Identity: 66.67% Query coverage: 28.51% Gaps: 1.59% Alignment: Query 10 AAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCG 72 | |||| ||| || ||||| || || || || ||| || | | |||||| |||| || Sbjct 3749 AGAGGGACUGGAAAUAAACGAGUGGAGCCU-AUGGAAAAAUUCCGAACUUGGCACAGGCCUCG 3810 >> URS000234D544_13333 Amborella trichopoda (A. trichopoda) long non-coding RNA (ATRI_LNC000120) E-value: 1.1e+4 Identity: 62.22% Query coverage: 40.72% Gaps: 1.11% Alignment: Query 121 UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 |||| ||| || ||| | ||||| | ||| +|| | || | ||||| |||||| ||| |+ | |||| | ||| + Sbjct 18550 AGGGGCGAUAGUCAACGAGCGCGCGAAGGAAGCUUAAGGACGGCGACAGAUGUU-GCCACGACCCCUUGCGGACGGCAAUAGACAU 18634 Query 207 CGUC 210 |||| Sbjct 18635 CGUC 18638 >> URS00000C9A2B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1e+4 Identity: 62.75% Query coverage: 23.08% Gaps: 0.00% Alignment: Query 74 GAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGG 124 || || |||| |||||||||||||| || | | ||| || | Sbjct 14 GAGUGCAGUCCCCUAUUACCACAAAUUAUGCAGUUGAGUUUCCUGGAUGUG 64 >> URS00023CFF4E_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC001928) E-value: 8.3e-20 Identity: 70.95% Query coverage: 81.00% Gaps: 2.23% Alignment: Query 43 UUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGG 131 | | |||| | | || ||||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| || Sbjct 4384 U----GUAUAGGAAUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGAUGUAGGCUCAACCACUUGGGCCGACCU 4468 Query 132 UAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || | | || | |||||||||| || || | ||||||| | ||| |||||| || | ||||||||||||||||||| Sbjct 4469 UAGGUAGGCACCCUUCCAAAGUGCAAUGGAAGUCACCAACCUAGGCCAUGAGUCUUACUGAUCGCCCAUUGACCCCGUCCAGGUAAGUA 4557 Query 221 U 221 | Sbjct 4558 U 4558 >> URS00023E29E2_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC017571) E-value: 7.7e+3 Identity: 78.95% Query coverage: 17.19% Gaps: 0.00% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGG 66 |||| | ||||||| ||| |||||||||||||| | Sbjct 1021 GAGAGAGCUCAAAUUUGAAAACUAGGUAAUUGGCAGAG 1058 >> URS00023DC93B_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC005593) E-value: 1e+4 Identity: 60.64% Query coverage: 39.82% Gaps: 10.64% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGC----GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC--CACUCUCCCACUU 121 ||||||| || | || ||||||||| ||| | ||||| | | || || ||| | | ||| || | ||||| | Sbjct 2757 CAAUUUUAGGUUCAAGUCAUUGGCAGGCGCCCACCUGGAGAACGAGGAAAU---UUAUUUCA-AUUUUAAAGUCAUCAGGCGCCCACCU 2841 Query 122 GGGGA 126 || || Sbjct 2842 GGAGA 2846 >> URS000235CDCA_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC017861) E-value: 1e+4 Identity: 60.64% Query coverage: 39.82% Gaps: 10.64% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGC----GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC--CACUCUCCCACUU 121 ||||||| || | || ||||||||| ||| | ||||| | | || || ||| | | ||| || | ||||| | Sbjct 4119 CAAUUUUAGGUUCAAGUCAUUGGCAGGCGCCCACCUGGAGAACGAGGAAAU---UUAUUUCA-AUUUUAAAGUCAUCAGGCGCCCACCU 4203 Query 122 GGGGA 126 || || Sbjct 4204 GGAGA 4208 >> URS0002742AD2_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 4.5e+3 Identity: 58.72% Query coverage: 49.32% Gaps: 1.83% Alignment: Query 13 GGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUU 100 |||||||| | | || || || | |||||||| || | | | | |||| || | | || | | || | | |||| Sbjct 1215 GGGCCUGUUAAUGGACUAGGUGGUCUAAAUUUUAGAUGAAUGAGAGCCGUUUUGGCCCAGCCA-UGAGUGCU-GCGAUAGCCCUAAUU 1300 Query 101 AUGACGUCCACUCUCCCACUU 121 ||| ||| |||| || | Sbjct 1301 CUGAUUUCCUUUCUCACAUGU 1321 >> URS00023B80CF_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC028475) E-value: 5.1e+3 Identity: 51.85% Query coverage: 58.37% Gaps: 12.59% Alignment: Query 11 AAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAA 97 || |||| ||| | | || |||||||| ||| | ||| || || || | | | || | | || || | Sbjct 59596 AACGGCCAAAAAG---AUAGAGUGGCCCAAAUUUGAAAAUCAGGCAACUGCCAUGUAGC--------CAUUCCCGCAUUUAACAACA 59671 Query 98 ------AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAA 139 | | | | | | | ||| | | || || || | || ||| Sbjct 59672 AUAAGCACUCUUAGGGCUAAUCUAUCUUUAGGCGAUAUUGCAAGCCAG 59719 >> URS00023BBD9E_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC020529) E-value: 4.6e+3 Identity: 58.49% Query coverage: 46.61% Gaps: 4.72% Alignment: Query 14 GGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGC---GCGAACGCGUACCCCCUCUACCACAAAUUA 101 || | | |||||| | || ||||| | || || ||||| || || ||| | |||| || |||| | ||| | || Sbjct 20 GG--UUUGAGUAAAAACAUAGGCCCAAAAUAUAGGCUUGGGUAAAAAACAAGGCCCGUUUAGAAAACGGGUCGAGCCUCGAGCACCACUUU 108 Query 102 UGACGUCCACUCUCC 116 | ||||| ||| Sbjct 109 UUUGGUCCAGGCUCG 123 >> URS0002722987_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 4.5e+3 Identity: 52.24% Query coverage: 60.63% Gaps: 11.19% Alignment: Query 13 GGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUU 100 |||||||| | || | || |||||||||| || | | | | |||| || | | || | | || | | |||| Sbjct 2315 GGGCCUGUUGAUGGACUGGUUGGUCCAAAUUUUAGAUGAAUGAGAGCCGUUUUGGCCCAGCCA-UGAGUGC-UGCGAUAGCUCUAAUU 2400 Query 101 AUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUC 146 ||| ||| |||| || | | || ||| | Sbjct 2401 CUGAUUUCCUUUCUCACAUGUUG---CAUCGUAC----------AC 2433 >> URS00023DF02C_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC001234) E-value: 6.9e-20 Identity: 71.13% Query coverage: 87.78% Gaps: 1.55% Alignment: Query 28 CAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCU 114 ||| || | ||||||| || || |||||| |||||| |||||||||| ||||| || | |||||||||||||| ||| Sbjct 18400 CAAAAG-UAAGAAAUUUUUGCUUAAG--AAUUGGUAGGGGCUGCGCGAACGCAAGCCCCCGCUGCAACAAAUUAUGACGUAGGCUCG 18483 Query 115 CCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUC 201 ||||||||| || || | | | | |||||||||| | || || ||||||| || ||| ||||||| || | Sbjct 18484 ACCACUUGGGCCGACCUUAGGUAGGCACCCCUCCAAAGUGCAAUGAAGGUCACAAAUCUAGGCCAUGGGUCUUAUUGAUCGACCAUU 18570 Query 202 GACCCCGUCCAGGUAAGUAU 221 |||||||||||||||||||| Sbjct 18571 GACCCCGUCCAGGUAAGUAU 18590 >> URS0002379811_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC022226) E-value: 1.4e+4 Identity: 67.44% Query coverage: 19.46% Gaps: 0.00% Alignment: Query 98 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAAC 140 |||||| |||| || | || |||||||||||| | | Sbjct 33745 AUUAUGUCGUCUACAAUUUCAAUUGGGGAGAUGGCUAGUCUUG 33787 >> URS000239D228_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC042632) E-value: 1.8e+4 Identity: 56.20% Query coverage: 53.85% Gaps: 11.57% Alignment: Query 61 GCAGGGGCCGCGCG-AACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCA 150 ||||| ||| | | | || | |||| |||| | | ||| | || |||| ||| || |||| || || || Sbjct 275 CCAGGGACCGGUUGCAUCACGCAACCCCGCUACGCCCAGUUAGGGGAACCGGUCUCUCACCUGCAGAGAC------------CGGUCCCCG 353 Query 151 AGUGCAAUGUGAGC-CAUUGAUGUAGGCCA 179 || |||| | ||| || ||||| || Sbjct 354 AGAGCAACAUCAGCCCAAUGAUGCAGUUUG 383 >> URS0002367437_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC015186) E-value: 1e+4 Identity: 61.64% Query coverage: 32.58% Gaps: 1.37% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUU-UAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUU 100 | |||| ||||||| ||| || || | ||| |+||||| || ||+|||||| | |||| | Sbjct 278644 GAAAGGGGCCAAAUUGUAAUGCGCUGGAAAAUUAGGGGGACUGCGCGCACAAAUAUCCCCUCAAGACCAAACU 278716 >> URS0002371B72_13333 Amborella trichopoda (A. trichopoda) long non-coding RNA (ATRI_LNC000120) E-value: 1.1e+4 Identity: 62.22% Query coverage: 40.72% Gaps: 1.11% Alignment: Query 121 UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 |||| ||| || ||| | ||||| | ||| +|| | || | ||||| |||||| ||| |+ | |||| | ||| + Sbjct 18472 AGGGGCGAUAGUCAACGAGCGCGCGAAGGAAGCUUAAGGACGGCGACAGAUGUU-GCCACGACCCCUUGCGGACGGCAAUAGACAU 18556 Query 207 CGUC 210 |||| Sbjct 18557 CGUC 18560 >> URS0002611727_77166 Dendroctonus ponderosae (Mountain pine beetle) uncharacterized LOC109545857 E-value: 9.8e+3 Identity: 66.67% Query coverage: 26.70% Gaps: 9.52% Alignment: Query 92 CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACG----CGCUCACCA 150 ||| || ||||| ||| |||||| | ||| || ||| |||| ||| ||||| || Sbjct 208 GCACCUAUAAUGACCUCCCAUCUCCC--UCGGGCAGUUGGCAAACUAACUAUGAUGCUCAGCA 268 >> URS00023ECC71_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC006351) E-value: 7e+3 Identity: 81.08% Query coverage: 16.74% Gaps: 0.00% Alignment: Query 30 AGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGG 66 |||| | ||||||| ||| |||||||||||||| | Sbjct 1688 AGAGAGCUCAAAUUUGAAAACUAGGUAAUUGGCAGAG 1724 >> URS0002368FFC_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC006349) E-value: 7e+3 Identity: 81.08% Query coverage: 16.74% Gaps: 0.00% Alignment: Query 30 AGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGG 66 |||| | ||||||| ||| |||||||||||||| | Sbjct 91308 AGAGAGCUCAAAUUUGAAAACUAGGUAAUUGGCAGAG 91344 >> URS0002405403_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC011958) E-value: 2.4e+4 Identity: 59.46% Query coverage: 28.51% Gaps: 14.86% Alignment: Query 43 UUUAAAUUUAGGUAA---UUGGCAGGGGCCGCGCGAACGCGUACCCCCUC--------UACCACAAAUUAUGAC 105 ||| |||| ||| | ||| | ||| | |||| ||| |||||| | | || |||| ||| | Sbjct 4066 UUUUAAUUAAGGAAUAUCUUGAAACGGGUCACGCGUACGUGUACCCAUUUGUUCGGCGCAUCAAAAAUCAUGUC 4139 >> URS00004B192A_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 5.9e+3 Identity: 54.09% Query coverage: 68.33% Gaps: 7.55% Alignment: Query 70 GCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG 159 || | || || ||| || || |||||||| ||| | | ||| | | | ||| ||| | | | ||| || | || | Sbjct 10 GCACAAAUGCAGUUCCCUACUGCCUCAAAUUAUACAGUCAAGUUUCCUGCAUUUGCAGA----AAAUCUCGGGGGUCAGCACAUCCAGAG 95 Query 160 UGAGCCAUUGAUGU--------AGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || || | || || | ||||| ||||| ||||| |||| |||||| Sbjct 96 UGCAACAGAUAAGUCUUACCCUGGGAAAACCACCUUCAUGAUCACAGUAUCACCCCUGCCAGUUAAGUA 164 >> URS00021BEFEE_158383 Olea europaea subsp. europaea non-coding RNA E-value: 1e+4 Identity: 52.67% Query coverage: 66.06% Gaps: 10.00% Alignment: Query 51 UAGGUAAUUGGCAGGGGCCGCGCGAAC---GCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAAC 136 | | | | || | ||| | || || | |||||| ||| ||||| |||| || |||| | || | || || Sbjct 202 UUGAUCACAUGCUGCCUCCGUGGGAGUCUAAGGUUCUCCCUCUUCCAAAAAUUCUGACCUCAACUCG-------GUGGUGUUGAAAAUU 283 Query 137 CAACGCGCUCACCAAGUGCAAUGUGAGC-CAUUGAUGUAGGCCACGGCCCUUCUUGAUCGG 196 | | ||| | || | | | |||||||| || | ||||| ||| | Sbjct 284 ----GAGUGUACCUCAAUCUAUUUCACCAUCUUGAUGUAAGCAAACUUCCUUCAAUAUCUG 340 >> URS00023BF17E_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC004466) E-value: 9.9e+3 Identity: 76.32% Query coverage: 17.19% Gaps: 0.00% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGG 66 |||| | ||||||| ||| |||||| ||||||| | Sbjct 15875 GAGAGAGCUCAAAUUUGAAAACUAGGUACUUGGCAGAG 15912 >> URS00025E0DED_9606 Homo sapiens (human) ncRNA E-value: 1.1e+4 Identity: 69.44% Query coverage: 16.29% Gaps: 0.00% Alignment: Query 44 UUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGC 79 | || | | ||| ||||||||||||||| || Sbjct 7899 UCAAGCUGAUGUAUUUGGCAGGGGCCGCGGGAGGAU 7934 >> URS00027E5D07_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015043039.1) E-value: 5.4e+3 Identity: 71.05% Query coverage: 17.19% Gaps: 0.00% Alignment: Query 48 AUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCC 85 | ||| |||| |||||||| |+|||| + |||| | | Sbjct 1113 AGUUAAGUAAAUGGCAGGGCCUGCGCAUGCGCGCGCGC 1150 >> URS000234158B_9606 Homo sapiens (human) HSALNT0014542 E-value: 7e+3 Identity: 68.33% Query coverage: 25.34% Gaps: 6.67% Alignment: Query 75 AACGCGUA--CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC--UUGGGGAGAUG 130 ||||| ||||| ||||||||||||||| || | | ||| || || || | || Sbjct 721 AACGCAGCCCCCCCCACUACCACAAAUUAUGCAGUGGAAUUUCCUACAUUUAGGAAAAUC 780 >> URS00023D08EA_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC004757) E-value: 2e+4 Identity: 71.74% Query coverage: 20.81% Gaps: 0.00% Alignment: Query 104 ACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACC 149 |||||| |||| +|| ||||| | ||||||| || || |||| Sbjct 25535 ACGUCCGGUCUCAUACCCAGGGAGGUUGUAAACCUACCCGAGCACC 25580 >> URS00023BB0B4_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC014520) E-value: 9e+3 Identity: 71.43% Query coverage: 19.00% Gaps: 0.00% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCG 70 | |||||| |||| || || | || ||||||||| ||| Sbjct 53219 AUGAGGGAAUGUAUUUCAAGUUCAAGUCAUUGGCAGGUGCCC 53260 >> URS00023484ED_9606 Homo sapiens (human) HSALNT0386640 E-value: 1e+4 Identity: 65.52% Query coverage: 26.24% Gaps: 0.00% Alignment: Query 144 CUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUC 201 ||| ||| | | ||| | | ||||||| || | ||||| ||| || ||||| Sbjct 379 CUCUCCAUCUUCCCUGUCACCUAUUGAUGGCAGCAAUGGCCCAUCUGGAGUGGCCGCU 436 >> URS00025E92CD_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000085744.1) E-value: 4.2e+3 Identity: 58.21% Query coverage: 58.37% Gaps: 5.22% Alignment: Query 59 UGGCAGGGGCCGCGCGAACGCGUACCCCCU-----CUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGC 142 ||||||| | | || ||| | || | | |||| ||| | || |||||+| | |||| || | || ||| |||| ||+ Sbjct 3761 CUGCAGGGGGCAGGAGACCGCCUCCCACAUGCUGACUACAACAGAGUA-GACGUUCUGUGUCCCGA-UGAGCAGCAGGUUGACCACCGU 3847 Query 143 GCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUU 187 |+| |||| || || || | | ||||| ||||| Sbjct 3848 GUUGACCAGGUAGAACACCAGGCUGACCACAAUGCCACAGCCCUC 3892 >> URS00023C8329_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC001929) E-value: 8.3e-20 Identity: 70.95% Query coverage: 81.00% Gaps: 2.23% Alignment: Query 43 UUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGG 131 | | |||| | | || ||||||||||||||||| |||||||||||||||||||||| || ||| ||||||||| || Sbjct 2051 U----GUAUAGGAAUUGGGUAGGGGCCGCGCGAACGCAGGCCCCCUCUACCACAAAUUAUGAUGUAGGCUCAACCACUUGGGCCGACCU 2135 Query 132 UAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 || | | || | |||||||||| || || | ||||||| | ||| |||||| || | ||||||||||||||||||| Sbjct 2136 UAGGUAGGCACCCUUCCAAAGUGCAAUGGAAGUCACCAACCUAGGCCAUGAGUCUUACUGAUCGCCCAUUGACCCCGUCCAGGUAAGUA 2224 Query 221 U 221 | Sbjct 2225 U 2225 >> URS00007FFB02_338471 Ronderosia bergi partial U1 E-value: 8.2e+3 Identity: 57.65% Query coverage: 37.56% Gaps: 2.35% Alignment: Query 85 CCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUU--GGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAU 167 || |||||| |||||||| | | | ||||| | |||| || | | || | | |||||||||| || Sbjct 6 CCGGCUACCAAAAAUUAUGCGCCCGAGUUACCCACAUUAGGGGUAAUCGCAGGGGUCAGCUCGAUCGAAGUGCAAUGAAAGAGCC 90 >> URS00023B4755_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC009606) E-value: 1.7e+4 Identity: 76.67% Query coverage: 13.57% Gaps: 0.00% Alignment: Query 56 AAUUGGCAGGGGCCGCGCGAACGCGUACCC 85 | ||||| | |||||||||||||||| Sbjct 19234 ACUUGGCCAAAGUCGCGCGAACGCGUACCU 19263 >> URS00027F80FC_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015043039.1) E-value: 5.4e+3 Identity: 71.05% Query coverage: 17.19% Gaps: 0.00% Alignment: Query 48 AUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCC 85 | ||| |||| |||||||| |+|||| + |||| | | Sbjct 1113 AGUUAAGUAAAUGGCAGGGCCUGCGCAUGCGCGCGCGC 1150 >> URS00023F8BF6_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC017849) E-value: 1.2e+4 Identity: 78.95% Query coverage: 17.19% Gaps: 0.00% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGG 66 ||||| | ||||||| ||| |||||| ||||||| | Sbjct 1081 AAGAGAGCUCAAAUUUAAAAACUAGGUACUUGGCAGAG 1118 >> URS00023DD935_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC001214) E-value: 1.2e+4 Identity: 59.09% Query coverage: 29.86% Gaps: 0.00% Alignment: Query 57 AUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUG 122 |+ ||| | | ||| ||||| || | | |||| | ||| || ||| ||||| ||| Sbjct 4088 ACAGGCGUGAGUCGCCGGAACGAAUAUCUUCGCUACUAGAAAAAGUGGCGUAAUCUCUCAGUUUUG 4153 >> URS0000E9E145_9606 Homo sapiens (human) HSALNT0225647 E-value: 7.4e+3 Identity: 58.82% Query coverage: 45.25% Gaps: 5.88% Alignment: Query 111 CUCUCCCACU-UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUU-GAUCGGCCG 199 ||| | ||| || | ||||||| | | | ||| || | | ||||| ||||| ||||| || |||| || || || Sbjct 57 CUCACUCACACAGGCGUUGUGGUAAAGCUGCAUG----CCAGCUGGGAGCUCAGCCAGGGAUGUCGGCCAGGGGCCUUAUUUCCUCCGCAC 143 Query 200 UCGACCCCGUC 210 || || || Sbjct 144 AUGAGCCUAUC 154 >> URS0000A88350_7918 Lepisosteus oculatus (Spotted gar) lncRNA (ENSLOCG00000022159.1) E-value: 8.2e+3 Identity: 61.54% Query coverage: 29.41% Gaps: 0.00% Alignment: Query 132 UAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGG 196 | || | ||||| ||| ||||| |||| || || || ||| |||| || | || | Sbjct 478 AGAGCCGGCUCGCUCGCCAGCAGCAAUCUGAGACAAUGUCAGAGCUCACUGCCCGCCUGGGUCUG 542 >> URS0000B243CE_10116 Rattus norvegicus long non-coding RNA NONRATT001985.2 E-value: 2e+4 Identity: 72.73% Query coverage: 19.91% Gaps: 0.00% Alignment: Query 3 ACUUAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUA 46 | ||| || ||| |||| ||||||| |||| || ||||| | Sbjct 1048 AUUUACCACAGGACCUGGAAGUAAAUCAGAGUCUCCUAAUUUAA 1091 >> URS0000CCFCCD_10116 Rattus norvegicus uncharacterized LOC102547261 E-value: 1.2e+4 Identity: 52.87% Query coverage: 74.66% Gaps: 9.77% Alignment: Query 43 UUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCC--CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 128 |||| || || ||||| || ||| ||| || || | | | | | || || | | || | |||| | | || Sbjct 7646 UUUA---UUUGGGAAUUGACAAGGGACGCCCGCACACACAUACAAACACA-ACAAAAGUGCUCUAGUUCUCUCUAUAAAAUUUGGUCC 7729 Query 129 UGGUAAACCA--ACGCGCUCACCAAGU---GCAAUGUGAGCCAUUGAUGUAGG-CCACG-GCCCUUCUUGAUCGGCCGUCGACCCC 207 | || || || | ||||| || | | | | |||| | |||| |||| |||| | | | | | || || Sbjct 7730 CCGAAAGACAUUACUCAACCACCAGGUCACGGAUUUCGGGCCAGCGGGCUAGGGCCACAAGCCCGUGUGGGCC----GGCGGCCGU 7811 >> URS0000E9EC9E_9606 Homo sapiens (human) HSALNT0053600 E-value: 6.2e+3 Identity: 60.56% Query coverage: 31.67% Gaps: 15.49% Alignment: Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCAC-CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUU 187 |||| |||| |||||| |||| | | | | |||||| |||||| | | | |||| || Sbjct 1071 GGUUGGCGAGAAGGUAAAACAACAACCCCGCACGAGUGCACUGUGAGACCUAAA----------GGCCUUU 1131 >> URS0000BD9E77_885580 Fukomys damarensis (Damara mole rat) lncRNA (ENSFDAG00000024315.1) E-value: 1e+4 Identity: 72.09% Query coverage: 19.46% Gaps: 0.00% Alignment: Query 132 UAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUA 174 | ||| || ||||| |||| | ||||||| || |||||| Sbjct 56 UCAACAAAUAUGCUCAUCAAGCACUAUGUGAGACACUGAUGUU 98 >> URS0000EBEFD8_9606 Homo sapiens (human) HSALNT0214356 E-value: 8e+3 Identity: 68.63% Query coverage: 23.08% Gaps: 1.96% Alignment: Query 105 CGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGC 155 | ||| | ||||| ||||||||| ||| || | | | | | ||||| | Sbjct 1188 UGGCCAUUUUCCCAUUUGGGGAGAAGGUCAAGA-AAGAGAUGAACAAGUAC 1237 >> URS0002422E5E_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC021027) E-value: 2.2e+4 Identity: 72.50% Query coverage: 18.10% Gaps: 0.00% Alignment: Query 98 AUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACC 137 |||||| |||| || | | | |||||||||||| | | Sbjct 8724 AUUAUGUCGUCUACAAUUCUAAUUGGGGAGAUGGCUAGUC 8763 >> URS0000564596_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.9e+4 Identity: 64.58% Query coverage: 21.72% Gaps: 0.00% Alignment: Query 80 GUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAG 127 | || |||||||||||||| ||| | | | |||| | | || Sbjct 20 AGCUCGCCACUACCACAAAUUAUACAGUCAAGUUUUCCACAUUUGAAG 67 >> URS000239F143_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC018953) E-value: 1.7e+4 Identity: 76.67% Query coverage: 13.57% Gaps: 0.00% Alignment: Query 56 AAUUGGCAGGGGCCGCGCGAACGCGUACCC 85 | ||||| | |||||||||||||||| Sbjct 6231 ACUUGGCCAAAGUCGCGCGAACGCGUACCU 6260 >> URS000242D2E5_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC011687) E-value: 1.7e+4 Identity: 79.31% Query coverage: 13.12% Gaps: 0.00% Alignment: Query 58 UUGGCAGGGGCCGCGCGAACGCGUACCCC 86 ||||||| | |||||||||| ||| || Sbjct 1392 UUGGCAGAAGUUGCGCGAACGCAUACUCC 1420 >> URS000238F1C6_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC017571) E-value: 7.7e+3 Identity: 78.95% Query coverage: 17.19% Gaps: 0.00% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGG 66 |||| | ||||||| ||| |||||||||||||| | Sbjct 7611 GAGAGAGCUCAAAUUUGAAAACUAGGUAAUUGGCAGAG 7648 >> URS0002418D6B_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC004416) E-value: 1.6e+4 Identity: 67.21% Query coverage: 27.60% Gaps: 11.48% Alignment: Query 6 UAUCAAAGGGCCUGUAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGG 66 +|| |||||| ||||||||||| | ||||| |||||+| |||| |||||| Sbjct 25444 CAUGGAAGGGCAUGUAAGUAAACU-------GCUAAUUUGAAAUUCAAUUAAUAGGCAGGU 25497 >> URS0002419D3E_3983 Manihot esculenta (cassava) long non-coding RNA (MESC_LNC010134) E-value: 6.3e+3 Identity: 54.13% Query coverage: 49.32% Gaps: 11.01% Alignment: Query 92 CCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCAC 180 | |||||||| |||| | |||| ||| ||| |||| | | | || |||| || | | || || | | Sbjct 4673 ACUCAAAUUAUUUCGUCAUAAAUUCCACCUGGAGAGGUGGUGACCA--------UAAUAAAGGCAAGGUUA----UAAUUGAAGACAAU 4749 Query 181 GGCCCUUCUUGAUCGGCCGU 200 ||| |||| | |||| Sbjct 4750 UCUCCUACUUGCACACCCGU 4769 >> URS000237DA26_218851 Aquilegia coerulea (A. coerulea) long non-coding RNA (ACOE_LNC000826) E-value: 6.7e+3 Identity: 54.95% Query coverage: 40.72% Gaps: 10.99% Alignment: Query 87 CUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAA-UGUGAGCCAUUGAUG 172 | ||||||| |||||| || |||| |||||||| | ||| |||| || || | || | | | Sbjct 2251 UUUGACCACAAUUUAUGAUGUAGACUCCUCCACUUGGAUUCUU---------UCGCAAGCACCCUUCAUAAUUGGAAAUCACUAACG 2328 Query 173 UAGG 176 |||| Sbjct 2329 UAGG 2332 >> URS000237F61D_13333 Amborella trichopoda (A. trichopoda) long non-coding RNA (ATRI_LNC000120) E-value: 1.1e+4 Identity: 62.22% Query coverage: 40.72% Gaps: 1.11% Alignment: Query 121 UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCC 206 |||| ||| || ||| | ||||| | ||| +|| | || | ||||| |||||| ||| |+ | |||| | ||| + Sbjct 19049 AGGGGCGAUAGUCAACGAGCGCGCGAAGGAAGCUUAAGGACGGCGACAGAUGUU-GCCACGACCCCUUGCGGACGGCAAUAGACAU 19133 Query 207 CGUC 210 |||| Sbjct 19134 CGUC 19137 >> URS0002415580_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC001229) E-value: 4.8e+3 Identity: 54.72% Query coverage: 46.61% Gaps: 15.09% Alignment: Query 32 AGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUA---CCACAAAUUAUGACGUCCACUCUC 115 | ||| || | || | || ||||| ||| || || |||| |||| ||| ||| ||| || | | | | Sbjct 64229 AUGGAUCAGCGUAUAUAGUUGGGUAAAUGGUGGG-GCU------------GCCCCUUCUAGCGCCAUUAAUAAUGUUGUACUCCCAC 64302 Query 116 CCACUUGGGGAGAUGGUAA 134 || ||| | |||| | Sbjct 64303 UCAUAUGGAAAAUUGGUCA 64321 >> URS0002361EDF_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC017668) E-value: 6.3e+3 Identity: 59.34% Query coverage: 38.91% Gaps: 5.49% Alignment: Query 6 UAUCAAAGG-GCCUGUAAGUAAACAAGA----GGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCC 87 |||||||| | | | | |||||||| |||| ||| | ||| ||| || | ||| || | | ||| | | |||| Sbjct 66197 AAUCAAAGGGGACAGAUGGCAAACAAGAAGAGUGGACAAAAAUGUAAUCCUAGUCAACUCAAAGGUGCUGGGUGAAUGGAUUGCCCC 66283 Query 88 UCUA 91 | Sbjct 66284 AUUU 66287 >> URS0002411542_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC005169) E-value: 4e+3 Identity: 78.95% Query coverage: 17.19% Gaps: 0.00% Alignment: Query 29 AAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGG 66 |||| | ||||||| ||| |||||||||||||| | Sbjct 50476 GAGAGAGCUCAAAUUUGAAAACUAGGUAAUUGGCAGAG 50513 >> URS00022B73C3_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00845013017.1) E-value: 2.3e+4 Identity: 57.02% Query coverage: 51.13% Gaps: 13.16% Alignment: Query 27 ACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAU-UAUGACGUCCACUCUCC 116 | || || ||||||||| ||||| || || | || | ||| ||||| | | | || |||| ||||| | | Sbjct 396 AAAAUAGCUACCAAAUUUCAAAUUCAGAUACUCU-------------GACCCAGUAAUUCCUCUUCUAAAUAUGUAUGUGUUCCACACACA 473 Query 117 CACUUGGGGAGAUGGUAAACCAA 139 | | || |||| |||||| Sbjct 474 CCUAU-GGUGGAUGAGAAACCAG 495 >> URS0002370AD4_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC016004) E-value: 1.9e+4 Identity: 58.89% Query coverage: 38.01% Gaps: 11.11% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGC----GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC--CACUCUCCCACUU 121 ||||||| || | || ||||||||| ||| | ||||| | | | || ||| | | | ||| || | ||||| | Sbjct 5345 CAAUUUUAGGUUCAAGUCAUUGGCAGGCGCCCUCCUGGAGAACGAGGAAA---UUUAUUUCAAUU-UUUAAGUCAUCAGGCGCCCACCU 5429 Query 122 G 122 Sbjct 5430 A 5430 >> URS000238DAAB_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC010949) E-value: 2.2e+4 Identity: 58.57% Query coverage: 31.67% Gaps: 8.57% Alignment: Query 50 UUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCAC 119 | || |||||||||| | || |||| |||||| | ||| |||| |||| ||| Sbjct 648 CUUGGCAAUUGGCAGGUGU------AAAUUGUACUCCCUCUGUCCCAAUUUAUAUGACUCACUUUCCUUU 711 >> URS000242ADF5_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC027627) E-value: 4.6e+3 Identity: 53.28% Query coverage: 49.32% Gaps: 10.66% Alignment: Query 53 GGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGG-GG------------AGA 128 | ||||||||| || | |||| || | | | | |||||| ||| | | | | | || ||| Sbjct 6691 GUAUAUUGGCAGGUUUGAAUGGACACCAUACCUCCACCAGGAUCAUCUAUGACCUCCGAUAUAGAAAGUCGAGGAAGGGCAGCAUAAGA 6779 Query 129 UGGUAAACCAACGCGCUCACCAAGUGCAAUGUG 161 ||| |||||| | |||| ||| | | | ||| Sbjct 6780 UGGAAAACCAGAGUGCUCUCCAUGAGAAUUGUA 6812 >> URS000242D264_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC005593) E-value: 1e+4 Identity: 60.64% Query coverage: 39.82% Gaps: 10.64% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGC----GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC--CACUCUCCCACUUGG 123 ||||||| || | || ||||||||| ||| | ||||| | | || || ||| | | ||| || | ||||| ||| Sbjct 45 CAAUUUUAGGUUCAAGUCAUUGGCAGGCGCCCACCUGGAGAACGAGGAAAU---UUAUUUCA-AUUUUAAAGUCAUCAGGCGCCCACCUGG 131 Query 124 GGA 126 || Sbjct 132 AGA 134 >> URS00027774D8_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 7.4e+3 Identity: 59.09% Query coverage: 29.86% Gaps: 6.06% Alignment: Query 24 UAAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUC 89 |||||||| | | || ||||| |||| | || |||||| ||| | || | | | Sbjct 134 AAAACAAGA--GUCAAAUUUUUACAUUUGCACAUUUUGCAGGGCGAGCGAGCACCAGCUUC--CCG 195 >> URS000239FADE_3694 Populus trichocarpa (black cottonwood) long non-coding RNA (PTRI_LNC001249) E-value: 1.3e+4 Identity: 58.23% Query coverage: 28.05% Gaps: 22.78% Alignment: Query 101 AUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAA------CCAACGC-----------GCUCACCAAGUGCAAUGUGA 162 |||| | ||| ||| ||||||||| || | ||| | ||||| | ||||| | | ||| | || Sbjct 20213 AUGA-GGCCAUUCUUCCACUUGGGUAGGUUGUACAAUGAGACCAACAUUUUUUUGGGAAGGUCACCCAUUACAACGCGA 20290 >> URS00023861D0_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC019890) E-value: 1.5e+4 Identity: 62.50% Query coverage: 35.75% Gaps: 1.25% Alignment: Query 20 UAAGUAAACAAGAGGGACCAAAUUUUAAAUUUAGGU-AAUUGGCAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAA 98 ||| |||||| ||||||| ||| | | | || | |||| || | || | || ||||| ||||||| | Sbjct 63979 UAAAGAAACAAAUGGGACCAGAUUGCACUAUGGCGCAAAAGCGGAGGGACCUCACGCGCAAAUAGCCCCUUUACCACAUA 64058 >> URS000047068E_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1e+4 Identity: 53.42% Query coverage: 60.63% Gaps: 8.22% Alignment: Query 84 CCCCUCUACCACAAAUUAUGACGUCCACUCUCC-CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG-UGAGCCA----- 166 | || |||||| ||| |||| || | | ||| | ||||||| || | || | ||| ||||| | | ||| Sbjct 16 CACCACUACCAAAAACUAUGCAGUUGAUUUUCCACGUUUGGGGAAAUCUCAGGGGUCAGCACAUCUGGAGUACAAUGGUUAUCCAAUGGU 105 Query 167 -----UUGAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAA 217 ||| | | ||| | | |||||| | || | |||||||| Sbjct 106 UGUACUUGCUCUGGGCAAACUAUUUCUUUGAUCACGGCAUGUCCUCUGCCAGGUAA 161 >> URS000051F49B_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.4e+4 Identity: 57.69% Query coverage: 46.15% Gaps: 12.50% Alignment: Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCCC--ACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGA 170 ||| ||||||||||||| ||| | | |||| | || |||| | | | | | | || || | | || ||| Sbjct 23 UUCCCAUUACCACAAAUUAUACAGUCAAGUUUCCCCUAUUUUGGGAAAAUGCA-----GGGGUCAAAACAUUUGGAGU-----ACAAUGA 102 Query 171 UGUAGGCCACGGCC 184 ||||||||| || Sbjct 103 -AUAGGCCACGCCC 115 >> URS000241E73C_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC005593) E-value: 1e+4 Identity: 60.64% Query coverage: 39.82% Gaps: 10.64% Alignment: Query 39 AAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGC----GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUC--CACUCUCCCACUUGG 123 ||||||| || | || ||||||||| ||| | ||||| | | || || ||| | | ||| || | ||||| ||| Sbjct 40 CAAUUUUAGGUUCAAGUCAUUGGCAGGCGCCCACCUGGAGAACGAGGAAAU---UUAUUUCA-AUUUUAAAGUCAUCAGGCGCCCACCUGG 126 Query 124 GGA 126 || Sbjct 127 AGA 129 >> URS0000282329_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.3e+4 Identity: 54.41% Query coverage: 60.63% Gaps: 1.47% Alignment: Query 87 CUCUACCACAAAUUAUGACGUCCACUCUCCCA--CUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUA 174 ||||||||||||||| ||| | | ||||| || || | || || | | ||| ||||| | | || Sbjct 18 UACUACCACAAAUUAUGUAGUCAAGUUUCCCAAAUUUAGGAAAAUCACAAGAGUCAAUACAUGCUGAGUACAAUGGAGACACCUCAUCCU 107 Query 175 GGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGUA 220 ||| | | | ||| | | | |||| ||| ||||||| Sbjct 108 GGCAAAGCCACUUUUGUGACCAUGAUAUUCCCCUGCCAUGUAAGUA 153 >> URS0000112F84_6239 Caenorhabditis elegans Unclassified non-coding RNA R11B5.2 E-value: 1.7e+4 Identity: 71.79% Query coverage: 17.65% Gaps: 0.00% Alignment: Query 67 GCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGAC 105 |||||| |+|||||||||||| || || | || || Sbjct 12 UACGCGCGGAUGCGUACCCCCUCAACAACCACUUGAGAG 50 >> URS00023A53A7_4155 Erythranthe guttata (spotted monkey flower) long non-coding RNA (EGUT_LNC001243) E-value: 2e+4 Identity: 71.74% Query coverage: 20.81% Gaps: 0.00% Alignment: Query 25 AAACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCG 70 |||| |||||||||||| | ||||| |||| + ||||| || Sbjct 23222 GAACAUGAGGGACCAAAUAUGAAAUUAGUGUAAACUUGAGGGGGCG 23267 >> URS000021E240_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 7.2e+3 Identity: 57.75% Query coverage: 32.13% Gaps: 5.63% Alignment: Query 68 CCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAAACCA 138 | | ||| | |||| |||||||||||||| | | | ||| || | | || || ||| Sbjct 8 GAGUGUGAAUACAGUCCCCUACUACCACAAAUUAUUCAGCUGAGUUUCCUACGUUUGA----GGCAAUCCA 74 >> URS000238816B_57577 Trifolium pratense (T. pratense) long non-coding RNA (TPRA_LNC008572) E-value: 4.6e+3 Identity: 59.72% Query coverage: 32.13% Gaps: 1.39% Alignment: Query 55 UAAUUGG-CAGGGGCCGCGCGAACGCGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGG 125 ||||||| || ||| |||||| ||| | | |||||||||| || || || | ||| Sbjct 109 UAAUUGGGUGCAGGACGCACGAACGUAGGCCCAAUUAGCAACAAAUUAUGGUGUAGGUUCCACCGAUGUGGG 180 >> URS0000122407_10029 Cricetulus griseus (Chinese hamster) U1 spliceosomal RNA E-value: 1.9e+4 Identity: 56.03% Query coverage: 61.99% Gaps: 3.55% Alignment: Query 83 CCCCCUCUACCACAAAUUAUGACGUCCACUCUCC--CACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUG--UGAGCCAUU 168 ||||| |||| |||||||| || | | | | | ||||||| || || || | |||| |||| |||||| Sbjct 22 CCCCCACUACAGCAAAUUAUACAGUUGAAUUUUCUGUAUUUGGGGAAAUUGUGGGAAUCAGCAAAACCUAAGUAUAAUGGAUGAGCCU-C 110 Query 169 GAUGUAGGCCACGGCCCUUCUUGAUCGGCCGUCGACCCCGUCCAGGUAAGU 219 |||| | || |||||||| ||| |||||||| | Sbjct 111 ACCCUAGGAAAACCACCCUCUUGAUCAUGAUAUCUGCCCUGCCAGGUAACU 161 >> URS0000EB548A_9606 Homo sapiens (human) HSALNT0225648 E-value: 7.4e+3 Identity: 58.82% Query coverage: 45.25% Gaps: 5.88% Alignment: Query 111 CUCUCCCACU-UGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUUCUU-GAUCGGCCG 199 ||| | ||| || | ||||||| | | | ||| || | | ||||| ||||| ||||| || |||| || || || Sbjct 57 CUCACUCACACAGGCGUUGUGGUAAAGCUGCAUG----CCAGCUGGGAGCUCAGCCAGGGAUGUCGGCCAGGGGCCUUAUUUCCUCCGCAC 143 Query 200 UCGACCCCGUC 210 || || || Sbjct 144 AUGAGCCUAUC 154 >> URS0000D59584_9606 Homo sapiens (human) non-protein coding lnc-LRP1B-4:3 E-value: 4.5e+3 Identity: 56.25% Query coverage: 32.58% Gaps: 10.00% Alignment: Query 36 ACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGC--------GCGAACGCGUACCCCCUCUACCACAAAUUAUGACGU 107 | ||| || ||| || || ||||| | | | |||| | ||||| ||| | ||| || ||||| Sbjct 4433 AGUAAACUUGAAAACUAAGUUUUUGGCCAUGACAGGAUAGGAAGUGGAACACAUACCCGCUCCAUCACUAACUAUGAUUA 4512 >> URS0000EB1A66_9606 Homo sapiens (human) HSALNT0053597 E-value: 6.2e+3 Identity: 60.56% Query coverage: 31.67% Gaps: 15.49% Alignment: Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCAC-CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUU 187 |||| |||| |||||| |||| | | | | |||||| |||||| | | | |||| || Sbjct 1276 GGUUGGCGAGAAGGUAAAACAACAACCCCGCACGAGUGCACUGUGAGACCUAAA----------GGCCUUU 1336 >> URS0000EF1FD8_9823 Sus scrofa (pig) lncRNA (ENSSSCG00070007171.1) E-value: 4.2e+3 Identity: 64.29% Query coverage: 25.34% Gaps: 0.00% Alignment: Query 79 CGUACCCCCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGAUGGUAA 134 | | | | ||| ||| ||| || ||||| || || ||| ||| |||| | | Sbjct 783 UGCAGCUCUUCUUCCAAAAAAGAUUGUGUCCAAACUUCCCCUUUGGGGGAUGUUGA 838 >> URS0000EBA5F5_9606 Homo sapiens (human) HSALNT0214357 E-value: 8e+3 Identity: 68.63% Query coverage: 23.08% Gaps: 1.96% Alignment: Query 105 CGUCCACUCUCCCACUUGGGGAGAUGGUAAACCAACGCGCUCACCAAGUGC 155 | ||| | ||||| ||||||||| ||| || | | | | | ||||| | Sbjct 1220 UGGCCAUUUUCCCAUUUGGGGAGAAGGUCAAGA-AAGAGAUGAACAAGUAC 1269 >> URS0000D5998A_9606 Homo sapiens (human) non-protein coding lnc-TOX4-4:2 E-value: 9.8e+3 Identity: 62.96% Query coverage: 24.43% Gaps: 0.00% Alignment: Query 26 AACAAGAGGGACCAAAUUUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGC 79 | || ||||| ||||| || |||||||||| || |||| | | | Sbjct 901 AUGAACAGGGAACAAAUGUUUUCUUUAGGUAAUAAUAAGUGGCCACAUGUCCCU 954 >> URS0000EEC1FF_9606 Homo sapiens (human) CCDC13 antisense RNA 1 E-value: 6.2e+3 Identity: 60.56% Query coverage: 31.67% Gaps: 15.49% Alignment: Query 118 ACUUGGGGAGAUGGUAAACCAACGCGCUCAC-CAAGUGCAAUGUGAGCCAUUGAUGUAGGCCACGGCCCUU 187 |||| |||| |||||| |||| | | | | |||||| |||||| | | | |||| || Sbjct 1042 GGUUGGCGAGAAGGUAAAACAACAACCCCGCACGAGUGCACUGUGAGACCUAAA----------GGCCUUU 1102 >> URS0000CCE996_10116 Rattus norvegicus uncharacterized LOC102547261 E-value: 1.2e+4 Identity: 52.87% Query coverage: 74.66% Gaps: 9.77% Alignment: Query 43 UUUAAAUUUAGGUAAUUGGCAGGGGCCGCGCGAACGCGUACCC--CCUCUACCACAAAUUAUGACGUCCACUCUCCCACUUGGGGAGA 128 |||| || || ||||| || ||| ||| || || | | | | | || || | | || | |||| | | || Sbjct 7646 UUUA---UUUGGGAAUUGACAAGGGACGCCCGCACACACAUACAAACACA-ACAAAAGUGCUCUAGUUCUCUCUAUAAAAUUUGGUCC 7729 Query 129 UGGUAAACCA--ACGCGCUCACCAAGU---GCAAUGUGAGCCAUUGAUGUAGG-CCACG-GCCCUUCUUGAUCGGCCGUCGACCCC 207 | || || || | ||||| || | | | | |||| | |||| |||| |||| | | | | | || || Sbjct 7730 CCGAAAGACAUUACUCAACCACCAGGUCACGGAUUUCGGGCCAGCGGGCUAGGGCCACAAGCCCGUGUGGGCC----GGCGGCCGU 7811