Os06g0286400 Query: UUGCUGCGUGACAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAA AUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCA GACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGU GUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCC GUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAAUGAAUCUCACCUAUUGA UAU Number of hits: 991 >> URS00008F3B44_39947 Oryza sativa Japonica Group (Japanese rice) sRNA Os06g0286400 E-value: 1.8e-85 Identity: 100.00% Query coverage: 99.34% Gaps: 0.00% Alignment: Query 2 UGCUGCGUGACAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUA 91 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 UGCUGCGUGACAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUA 91 Query 92 CUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUG 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 92 CUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUG 181 Query 182 UGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAU 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 182 UGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAU 271 Query 272 UCAGUGAUAUAAUGAAUCUCACCUAUUGAUA 302 ||||||||||||||||||||||||||||||| Sbjct 272 UCAGUGAUAUAAUGAAUCUCACCUAUUGAUA 302 >> URS0002354A72_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC017754) E-value: 1.6e-24 Identity: 75.41% Query coverage: 76.90% Gaps: 5.74% Alignment: Query 68 UCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUU-AGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAA 157 || ||||||||||||||||||||||||||||||||||||| | |||| | ||||| | | ||| | | |||| ||||| ||||| Sbjct 8 UCGUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUGUAAGAGGUACCCAGGCCCC-CUGGGCCAUCACGAUGGGUAUCUCGUAAAA 97 Query 158 CUUUGAGGUGUGUGUAUGUAU-GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUC-CUG 246 || ||| ||| ||||||||| ||||||||||| ||||| | | || |||||| ||||||||||||||||||||| | ||||| | | | Sbjct 98 CUCUGAAGUG--UGUAUGUAUGGUGUGAGGGUUGUCAGACACUCGUUUGGAUAAGUGAACUUCUGAUUGUAAUUCUGGUCUUCCUUGUCGG 186 Query 247 UGACAUUCUGUGAUGUAGUCGUUAU---UCAG-UGAUAUA--A--UGAAUCUCACCUAUUGA 300 | | || |||| ||||| || | || ||||||| | ||| |||| ||||||| Sbjct 187 UCUCCUUUUGUGUAGUAGUAGUAGUGGUGAAGUUGAUAUAUGAUUUGAGUCUCGCCUAUUGC 248 >> URS0000E65A3F_198806 Calidris pugnax (ruff) lncRNA (ENSCPUG00000003716.1) E-value: 2.1e+1 Identity: 49.25% Query coverage: 60.40% Gaps: 16.58% Alignment: Query 53 GUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCC---CAGACUCUACUGCGGUGCUA 138 ||||||| ||| | |||| || |||| || |||| |||| || |||| | || |||| | || | Sbjct 335 ACUGCAAAACCACUGCAACUAAAUUAAGCCAUAUGU----CCUCUAUAAUUCCUUGCAGUGAUGAUGAACUCACACUACCUAGUUGAGA 419 Query 139 GAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC-------------GGAUAAAUGA 214 | || || | | ||||| ||| |||||| |||| |||| | || | | | ||| Sbjct 420 AGUAGG------------UGCAUGGGUUUUGUGUGUGUUUGUGUGCGGGUACGCAGACAGAAAUGCUCCACAACCACGGGCUCAGGUGA 496 Query 215 ACUUCUGAUUGUAAUUCUAGC 235 | |||| ||| | | || Sbjct 497 AGCUCUGCUUGGCACCCA-GC 516 >> URS0000BC4B1C_10141 Cavia porcellus (domestic guinea pig) lncRNA (ENSCPOG00000032239.1) E-value: 2.8e+1 Identity: 57.97% Query coverage: 41.91% Gaps: 10.87% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUU--GGG--CA-UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUG------UGAGGGUUAUCAGAUG 197 ||||| | || ||||| | || || |||| | | | ||| || |||| ||| || | || | || || ||| Sbjct 3804 GACUCCAUGGCUGUGCUGGCCCCUGGAGACAGCCUCUAGACAGUGUGAUGUCAGUGUGUGUGUGAGUGUGGGUGUGUGUGUGCACAUG 3891 Query 198 CACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 ||||| | || | || | |||| || | |||||| ||||| Sbjct 3892 CACAUGCACAUGCAAGAGCCUCUGG----AAGCCAGCCCUUCCAUCCUGG 3937 >> URS0000BC885D_10141 Cavia porcellus (domestic guinea pig) lncRNA (ENSCPOG00000032239.1) E-value: 2.8e+1 Identity: 57.97% Query coverage: 41.91% Gaps: 10.87% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUU--GGG--CA-UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUG------UGAGGGUUAUCAGAUG 197 ||||| | || ||||| | || || |||| | | | ||| || |||| ||| || | || | || || ||| Sbjct 3690 GACUCCAUGGCUGUGCUGGCCCCUGGAGACAGCCUCUAGACAGUGUGAUGUCAGUGUGUGUGUGAGUGUGGGUGUGUGUGUGCACAUG 3777 Query 198 CACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 ||||| | || | || | |||| || | |||||| ||||| Sbjct 3778 CACAUGCACAUGCAAGAGCCUCUGG----AAGCCAGCCCUUCCAUCCUGG 3823 >> URS00019599BC_9823 Sus scrofa (pig) lncRNA (ENSSSCG00050052962.1) E-value: 6.2e+1 Identity: 54.37% Query coverage: 48.51% Gaps: 9.38% Alignment: Query 81 CUAUAUACAUACUAUCCAUAAG--ACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACU-------- 159 || ||| ||| || || | | | | | | | ||||| ||| | | | | || | || ||| | | | Sbjct 1276 CUGAAUAUAUAGCAUGCAGAGGGAAGACUGUGGGACUUCCCAGCCUCCAUAGUCAUAUCACAUGAGUCAAACCUUUAUAGUAAUUUACU 1364 Query 160 ---UUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUA 227 | | |||||||| ||| ||||| | || || | |||||| | ||| || | ||| ||||| Sbjct 1365 AUAUACAAGUGUGUGUGUGUGUGUGU--GUGUGUGCACAGGCACAUGUGAAUACUUGUAUCUCUUAUUGUU 1433 >> URS00022DE1F4_9031 Gallus gallus (chicken) non-coding RNA E-value: 8e+1 Identity: 57.80% Query coverage: 35.31% Gaps: 3.67% Alignment: Query 53 GUUGCAAAAUUAC--UAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAG 139 || |||| | || | | || ||| | | ||| | | | | || ||| |||||||||||| || || | ||||| Sbjct 6485 UUUUCAAAGUCACACCACCUUUAGCACUUGUUUUUCACAAGCCUUUCCAACAGCCAUUUUGAGAUGCCCAGAA--CACAGCAGGGCUAG 6571 Query 140 AUUGGGCAUCUCUUAAAACU 159 ||||| ||| | || Sbjct 6572 UCGGGGCACGGCUUGGAGCU 6591 >> URS0000D63B0C_9598 Pan troglodytes (chimpanzee) lncRNA (ENSPTRG00000054226.1) E-value: 1.1e+2 Identity: 54.00% Query coverage: 74.26% Gaps: 12.40% Alignment: Query 72 UUAAUUUUGCUAUA---UACAUACUAUCCAUAAGACCUU-UUAGAGAUGCCCAGA---CUCUACUGCGGUGCUAGAUUGGGCAUCUCUU-- 153 || |||||||| |||| || || | ||||| | | |||||||| | | | | | |||| | | | | | | | Sbjct 222 UUUGGGUUGCUAUAAAGUACAGACGAUUCUACCAACCUUGACACAAAUGCCCAGCUGCCCCCAGUUCAGUGCCACAGAGAGAAGCCUUGCA 312 Query 154 -AAAACUUUGAGGUGUGUGUAUG--UAUGUGUGAG-GGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCU--- 237 || | ||||| | |||| ||| ||| | || | ||||| | | || ||||| | || |||| || Sbjct 313 GAACAGGUUGAG-UUUGUGGAUGGGCAUGCGGUAGACGGUAUCAUC---UCUUCUCUAUCAAUGACUUGG--GGGAUACUUCUGGCAACAA 397 Query 238 UCCGUCCUGUGACAUUCUGUGAUGUAGUCG---------UUAUUCAGUGAUAUAAUGAAUCUCACCUA 296 | | |||| ||| |||| | | | ||||||| ||| ||||||||| | ||| Sbjct 398 AACAGACAGUGAUGUUCAGUGAAGGUCUGGGCCUUCCAAUUAUUCACUGAAAUAAUGAAUUCCUGCUA 465 >> URS000099D789_9544 Macaca mulatta (Rhesus monkey) Metazoan signal recognition particle RNA E-value: 1.2e+2 Identity: 66.23% Query coverage: 23.76% Gaps: 6.49% Alignment: Query 134 UGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 24 GGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUACGGUAAUCAGAUGCCCACACU 100 >> URS0002607E48_2015173 Ooceraea biroi (Clonal raider ant) protein PIH1D3, transcript variant X3 E-value: 1.4e+2 Identity: 58.26% Query coverage: 37.29% Gaps: 3.48% Alignment: Query 73 UAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAAC 158 |||||||| | | ||||| | | ||| ||||| ||||| | | ||| || || | | || || || ||| Sbjct 1652 AAAUUUUGCCGUGGAAAUACUGAAUUUUAUACCCCUUAGAUAUGCC--GUCCGAGUGGCGUUGUUAAAAGGAACACUUCCUAUAAC 1735 Query 159 UUUGAGGUGUGUGUA--UGUAUGUGUGAG 185 |||| | || | || || | | ||| Sbjct 1736 UUUGCGAUGGGGGUGAGUGGAAGGAGGAG 1764 >> URS000194FD59_9823 Sus scrofa (pig) lncRNA (ENSSSCG00040000241.1) E-value: 1.4e+2 Identity: 60.58% Query coverage: 42.24% Gaps: 10.95% Alignment: Query 86 UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAU--CUCUUAAAACUUUGAG-GUGUGUG 171 ||||| | | || ||||| | |||| || ||||| | ||| ||||| | || |||| | || | ||||||| Sbjct 1482 UACAUUCCCUAUGUAUCACCUUC---AAAUGCAAAGG-GCUACUACUGUGA--CCUUGGGAGUGACUGGCAAAAAUGUGUGUGUGUGUG 1564 Query 172 UAUGUAUGUGUGAG------GGUUAUCAGAUGCACAUUCGGAUAAAUG 213 | |||||||||| | || || |||||||| ||| ||| Sbjct 1565 UGUGUAUGUGUGUGCGUGUGUGUCUGCACAUGCACAUGUACAUACAUG 1612 >> URS0000C4B17C_9555 Papio anubis (Olive baboon) Metazoan signal recognition particle RNA E-value: 1.6e+2 Identity: 66.23% Query coverage: 23.76% Gaps: 6.49% Alignment: Query 134 UGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 24 GGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUAUGGUAAUCAGAUGCCCACACU 100 >> URS0000CC469E_9531 Cercocebus atys (Sooty mangabey) Metazoan signal recognition particle RNA (ENSCATG00000002626.1) E-value: 1.6e+2 Identity: 66.23% Query coverage: 23.76% Gaps: 6.49% Alignment: Query 134 UGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 24 GGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUAUGGUAAUCAGAUGCCCACACU 100 >> URS0000911787_9544 Macaca mulatta (Macaque) Metazoan signal recognition particle RNA (ENSMMUG00000041073.2) E-value: 1.6e+2 Identity: 66.23% Query coverage: 23.76% Gaps: 6.49% Alignment: Query 134 UGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 24 GGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUAUGGUAAUCAGAUGCCCACACU 100 >> URS0000CCC857_9545 Macaca nemestrina (Pig-tailed macaque) Metazoan signal recognition particle RNA (ENSMNEG00000017075.1) E-value: 1.6e+2 Identity: 66.23% Query coverage: 23.76% Gaps: 6.49% Alignment: Query 134 UGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 24 GGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUAUGGUAAUCAGAUGCCCACACU 100 >> URS0000911787_9541 Macaca fascicularis (Crab-eating macaque) Metazoan signal recognition particle RNA (ENSMFAG00000021417.2) E-value: 1.6e+2 Identity: 66.23% Query coverage: 23.76% Gaps: 6.49% Alignment: Query 134 UGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 24 GGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUAUGGUAAUCAGAUGCCCACACU 100 >> URS0000AA5AF1_60711 Chlorocebus sabaeus (African green monkey) Metazoan signal recognition particle RNA (ENSCSAG00000022476.1) E-value: 1.7e+2 Identity: 65.43% Query coverage: 25.08% Gaps: 6.17% Alignment: Query 130 GCGGUGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 | | ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 20 GAGAGGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUAUGGUAAUCAGAUGCCCACACU 100 >> URS0000C0F70F_60711 Chlorocebus sabaeus Metazoan signal recognition particle RNA E-value: 1.7e+2 Identity: 65.43% Query coverage: 25.08% Gaps: 6.17% Alignment: Query 130 GCGGUGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 | | ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 20 GAGAGGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUAUGGUAAUCAGAUGCCCACACU 100 >> URS00009AFC95_10090 Mus musculus long non-coding RNA NONMMUT066667.2 E-value: 1.8e+2 Identity: 56.78% Query coverage: 38.61% Gaps: 7.63% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGC 146 ||||| | ||| | | ||| || || || ||| ||||| | ||||||| || | |||| ||||||| | | Sbjct 739 CAAAACCCCACUCCAGCAGCUCUGCCUUAGCCACACAGCCCAAGAGACCAGU---GGAUGCCCUGAAACCACUGGGGUGCUAAACCUGAU 825 Query 147 -AUCUCUUAAAACUUUGAGGUGUGUGUA 173 ||| ||| | | ||| || || Sbjct 826 UUUCUUUUAUACAUGUGA-----GUUUA 848 >> URS0000A8FB9D_9565 Theropithecus gelada (gelada) Metazoan signal recognition particle RNA (ENSTGEG00000019572.1) E-value: 1.8e+2 Identity: 66.23% Query coverage: 23.76% Gaps: 6.49% Alignment: Query 134 UGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 24 GGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUAUGGUAAUCAGAUGCCCACACU 100 >> URS0000A8FB9D_9568 Mandrillus leucophaeus (Drill) Metazoan signal recognition particle RNA (ENSMLEG00000011027.1) E-value: 1.8e+2 Identity: 66.23% Query coverage: 23.76% Gaps: 6.49% Alignment: Query 134 UGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 24 GGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUAUGGUAAUCAGAUGCCCACACU 100 >> URS00022B258E_9555 Papio anubis (olive baboon) Metazoan signal recognition particle RNA (ENSPANG00000008358.3) E-value: 1.8e+2 Identity: 66.23% Query coverage: 23.76% Gaps: 6.49% Alignment: Query 134 UGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGGUGUGUGUA---UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||| | ||| | ||||||| | || ||| ||||||| ||| |||| | ||| ||||||||| || | Sbjct 24 GGCUUGUAUGGGAGGAUCUCUUGAGACCAGGAGAUGUGUGUGGGUUGUGUGUGCUAUGGUAAUCAGAUGCCCACACU 100 >> URS00009BB0CA_10090 Mus musculus long non-coding RNA NONMMUT011658.2 E-value: 2e+2 Identity: 63.51% Query coverage: 24.42% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCU 237 |||||||| ||| |||||| | || || ||||||| | || |||| || | | | ||||| | Sbjct 4024 UGUGUGUGUGUGUGUGUGUGUGUGUACACAUGUGCACAUACUCAUGAAUGCACACAUCUAUAUGGAUCUAGUCC 4097 >> URS0002869451_9940 Ovis aries (sheep) lncRNA (ENSOARG00020040964.1) E-value: 2.2e+2 Identity: 55.79% Query coverage: 56.44% Gaps: 12.63% Alignment: Query 30 CUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUAC-AUACUAUCCAU-AAGAC-CUUUUAGAGAUGC 117 || || || | || | |||||| || || | | || ||| | | | | ||||||| ||| | | || | || Sbjct 117 GCUGCUGGGAAGCACAGGCAGGAGUUGCAGAAGAGGUACC--UAAA---UGCCAGAGAUGAAGUUAUCCAUUAAGUCCCAACUAAGCAGGC 202 Query 118 CCAGAC-------UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUU---------UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUC 192 |||| | |||| | |||| | ||| ||||| ||||| | |||||||||| ||| |||||| | || | Sbjct 203 CCAGGCAUGGUUUUCUAUUUGGGUGUGAAUAUGGCAGCUUCUUAGAACUUUUUUUCUUUUAAGGUGUGUGUGUGUGUGUGUGUGUGUGUUU 293 Query 193 AGAUGCAC 200 | ||| || Sbjct 294 AAAUGGAC 301 >> URS0002766A94_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 2.3e+2 Identity: 61.54% Query coverage: 24.42% Gaps: 18.68% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUG----AGGGUUAUCAGAUGCACAUU------C-------GGAUAAAUGAACUUCUGAUUG 225 ||||| | ||||||||||||| | |||||| ||| | | || || || | ||||||||||| |||| || Sbjct 442 UAAAAUUGUGAGGUGUGUGUACGCGUGUGUGUGUACGGGCUCAUACAUACAUAUCUAAUUUCCUCUUGGGGAUAAAUGAAGUUCUUCUUA 531 Query 226 U 226 | Sbjct 532 U 532 >> URS0002754A55_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 2.3e+2 Identity: 61.54% Query coverage: 24.42% Gaps: 18.68% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUG----AGGGUUAUCAGAUGCACAUU------C-------GGAUAAAUGAACUUCUGAUUG 225 ||||| | ||||||||||||| | |||||| ||| | | || || || | ||||||||||| |||| || Sbjct 442 UAAAAUUGUGAGGUGUGUGUACGCGUGUGUGUGUACGGGCUCAUACAUACAUAUCUAAUUUCCUCUUGGGGAUAAAUGAAGUUCUUCUUA 531 Query 226 U 226 | Sbjct 532 U 532 >> URS00009C3505_10090 Mus musculus long non-coding RNA NONMMUT029178.2 E-value: 2.7e+2 Identity: 60.38% Query coverage: 32.67% Gaps: 6.60% Alignment: Query 106 UUUUAGAGAUGCCCAGACUCUACUGCGGUGC----UAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGU--AUGU-AUGUGUGAGG 186 | ||||||| ||||||| | | | || ||| || | | ||||||| || ||| || | ||||||| || Sbjct 1006 GCUGAGAGAUGGCCAGACUUCAGUUUGAAGCACACCUGAUGGGUUACUCACAACCACUUUGAAGUCCUUGUGAAUCUGAUGUGUGUGG 1093 Query 187 GUUAUCAGAUGCACAUUC 204 || ||| ||||||| | Sbjct 1094 CUUCUCAUCUGCACAUAC 1111 >> URS000239AD98_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC008548) E-value: 2.7e+2 Identity: 58.62% Query coverage: 36.63% Gaps: 11.21% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCU-UAAAACUUUGAGGUGUGUGUAU----GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 ||| | | ||||| || ||| || | || || | || | ||| | ||| | ||| || | || ||| Sbjct 49729 GACUAUGUUACUAGACCGGUAAUCACUAUCGAAAUUCUAUUUGAGGGUACAGCGGGAUGCGGGAGAGU--------GGACCGCUGGA 49807 Query 208 UAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 || ||| |||| |||||| || |||||| Sbjct 49808 UAUAUGCACUUAUGAUUGGAACUCUAGCA 49836 >> URS0002352370_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC008548) E-value: 2.7e+2 Identity: 58.62% Query coverage: 36.63% Gaps: 11.21% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCU-UAAAACUUUGAGGUGUGUGUAU----GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 ||| | | ||||| || ||| || | || || | || | ||| | ||| | ||| || | || ||| Sbjct 49990 GACUAUGUUACUAGACCGGUAAUCACUAUCGAAAUUCUAUUUGAGGGUACAGCGGGAUGCGGGAGAGU--------GGACCGCUGGA 50068 Query 208 UAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 || ||| |||| |||||| || |||||| Sbjct 50069 UAUAUGCACUUAUGAUUGGAACUCUAGCA 50097 >> URS00023863C3_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC008548) E-value: 2.7e+2 Identity: 58.62% Query coverage: 36.63% Gaps: 11.21% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCU-UAAAACUUUGAGGUGUGUGUAU----GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 ||| | | ||||| || ||| || | || || | || | ||| | ||| | ||| || | || ||| Sbjct 47393 GACUAUGUUACUAGACCGGUAAUCACUAUCGAAAUUCUAUUUGAGGGUACAGCGGGAUGCGGGAGAGU--------GGACCGCUGGA 47471 Query 208 UAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 || ||| |||| |||||| || |||||| Sbjct 47472 UAUAUGCACUUAUGAUUGGAACUCUAGCA 47500 >> URS00023CCF6B_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC008548) E-value: 2.7e+2 Identity: 58.62% Query coverage: 36.63% Gaps: 11.21% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCU-UAAAACUUUGAGGUGUGUGUAU----GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 ||| | | ||||| || ||| || | || || | || | ||| | ||| | ||| || | || ||| Sbjct 49732 GACUAUGUUACUAGACCGGUAAUCACUAUCGAAAUUCUAUUUGAGGGUACAGCGGGAUGCGGGAGAGU--------GGACCGCUGGA 49810 Query 208 UAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 || ||| |||| |||||| || |||||| Sbjct 49811 UAUAUGCACUUAUGAUUGGAACUCUAGCA 49839 >> URS000237804C_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC008548) E-value: 2.7e+2 Identity: 58.62% Query coverage: 36.63% Gaps: 11.21% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCU-UAAAACUUUGAGGUGUGUGUAU----GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 ||| | | ||||| || ||| || | || || | || | ||| | ||| | ||| || | || ||| Sbjct 50286 GACUAUGUUACUAGACCGGUAAUCACUAUCGAAAUUCUAUUUGAGGGUACAGCGGGAUGCGGGAGAGU--------GGACCGCUGGA 50364 Query 208 UAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 || ||| |||| |||||| || |||||| Sbjct 50365 UAUAUGCACUUAUGAUUGGAACUCUAGCA 50393 >> URS00008C3E76_9606 Homo sapiens (human) non-protein coding lnc-C17orf51-17:1 E-value: 2.8e+2 Identity: 57.69% Query coverage: 33.99% Gaps: 3.85% Alignment: Query 100 AAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGU-GAGGGUU 189 |||| || | |||| || ||| ||||||||| |||| | || ||| | | | || | | | ||| || | || | | Sbjct 851 AAGAACUCUGAGAGGAGCACAGGCUCUACUGCAGUGCCUGGACGGCUUCCUCAUGCAGUUC---CGUAUUUCUCUGUCUGGGCAGAAGAUG 938 Query 190 AUCAGAUGCACAU 202 || |||| | Sbjct 939 GUCCUAUGCUUAC 951 >> URS000240D2CB_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC012447) E-value: 3.1e+2 Identity: 52.76% Query coverage: 50.83% Gaps: 7.36% Alignment: Query 113 GAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCA 199 | | |||||| ||| |||| ||||| | | || | | ||| | | ||| | || || ||||| || ||| | Sbjct 42071 GCUCAUCAGACUGGCCUGUGGUGGUAGAUGGCUGACCU--UUUAUCUUCGGGUUGUUCGCAUCCAUAAGUGAGUACCAUGAGAAGGG 42155 Query 200 CAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCC---------UGUGACAUUCUGUGAUGUAGUC 266 | | || | | ||| || ||||| |||| || | || | ||||| ||| || Sbjct 42156 CUUCUUGAGC-GUCACCUUUGUAUCAAAAUUCCUUGGUUCCACCCCCGUAUCCGUAAGAUACUCUGUAAUGGUGUU 42230 >> URS0000B10E47_2026724 Chloroflexi bacterium RNaseP_bact_a ribozyme sequence E-value: 3.3e+2 Identity: 57.14% Query coverage: 34.65% Gaps: 6.67% Alignment: Query 119 CAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 | ||||| | | ||| |||||| |||||| | || ||| | | | || | | || ||| | | || || | | Sbjct 236 AAAACUCUUCGG-AGUGGGAGAUUGCUCAUCUCCUCAAGCUUCGGGUAGGCUGCAAGAAUUUGUUGGUAACA------ACAAAUCCAG 316 Query 207 AUAAAUGAACUUCUGAU 223 ||| |||| | || | Sbjct 317 AUAGAUGAUCAUCCAUU 333 >> URS0000B10E47_1895927 Chloroflexi bacterium 44-23 Bacterial RNase P class A E-value: 3.3e+2 Identity: 57.14% Query coverage: 34.65% Gaps: 6.67% Alignment: Query 119 CAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 | ||||| | | ||| |||||| |||||| | || ||| | | | || | | || ||| | | || || | | Sbjct 236 AAAACUCUUCGG-AGUGGGAGAUUGCUCAUCUCCUCAAGCUUCGGGUAGGCUGCAAGAAUUUGUUGGUAACA------ACAAAUCCAG 316 Query 207 AUAAAUGAACUUCUGAU 223 ||| |||| | || | Sbjct 317 AUAGAUGAUCAUCCAUU 333 >> URS00025E50F2_9606 Homo sapiens (human) novel transcript E-value: 3.9e+2 Identity: 59.06% Query coverage: 38.94% Gaps: 10.24% Alignment: Query 179 GUGUGAGGG------UUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGU--AAUUCUAGCCUUCCGUCC-UGUGACAUUCUGUG 258 ||||| ||| | | | || || || || ||| |||| ||| |||||| ||||| |||| | || ||| | Sbjct 2896 GUGUGUGGGACUGAAGCACCUGUUGUGCAAUCUGA----AGAAGCUCUGGUUGGUGAAUUCUGGCCUUACGUCAGUCUGUUGUUCAGCU 2980 Query 259 AUGUAGUCGUUAUUCAGUGAUAUAAUGAAUCUCACCUA 296 ||| ||| || |||| || ||||||||| | Sbjct 2981 UUGUCCUCGGUACUCAGCACUAAUCAGAAUCUCACGCA 3018 >> URS00025F0893_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000114581.1) E-value: 3.9e+2 Identity: 52.36% Query coverage: 59.41% Gaps: 14.66% Alignment: Query 8 GUGACAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUA---UCCUUUAAUU-------UUGCUAUAUAC 88 || ||||| | | ||| ||| || || || |||||| || || ||| | | |||| || | ||| Sbjct 170 GUUCCAUCCUGGCAGUCACCAUCACAAUC---ACCUCCUCGAUGGGUAAGAAUAUAACUGCUGUGCCAUAAUCAUCCAGCCUGAUGUAUUG 257 Query 89 AUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAA-AACUUUGAGGUGUGUGUAUGUAU 178 || || ||| | || | ||||| | | | ||| | | ||||| || |||||||||||| ||| | Sbjct 258 AUGGACUCAUUAAAA-CUCUCUUUAAUGCCAAAUGGCCA-------------UUGCACUCCACUUAAUGACAAUGAGGUGUGUGUGUGUGU 334 Query 179 GUGUGAGGG 187 ||||| | | Sbjct 335 GUGUGUGUG 343 >> URS0000EB186C_9606 Homo sapiens (human) HSALNT0093569 E-value: 4e+2 Identity: 66.22% Query coverage: 23.43% Gaps: 4.05% Alignment: Query 148 UCUCUUAAAACUUUGAGG---UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUU 218 ||||||| || | | ||| ||||||| ||| |||||| | || || ||||| || | | || | | | Sbjct 7604 UCUCUUAUAAUUCUAAGGCAUUGUGUGUGUGUGUGUGUGUGUGUACACAAAUGCAUAUGCACACUAACGUAACU 7677 >> URS000233EB74_9606 Homo sapiens (human) HSALNT0329142 E-value: 4e+2 Identity: 66.22% Query coverage: 23.43% Gaps: 4.05% Alignment: Query 148 UCUCUUAAAACUUUGAGG---UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUU 218 ||||||| || | | ||| ||||||| ||| |||||| | || || ||||| || | | || | | | Sbjct 4877 UCUCUUAUAAUUCUAAGGCAUUGUGUGUGUGUGUGUGUGUGUGUACACAAAUGCAUAUGCACACUAACGUAACU 4950 >> URS0000EB6F67_9606 Homo sapiens (human) HSALNT0093568 E-value: 4e+2 Identity: 66.22% Query coverage: 23.43% Gaps: 4.05% Alignment: Query 148 UCUCUUAAAACUUUGAGG---UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUU 218 ||||||| || | | ||| ||||||| ||| |||||| | || || ||||| || | | || | | | Sbjct 2788 UCUCUUAUAAUUCUAAGGCAUUGUGUGUGUGUGUGUGUGUGUGUACACAAAUGCAUAUGCACACUAACGUAACU 2861 >> URS0000D62F3C_9597 Pan paniscus (bonobo) lncRNA (ENSPPAG00000045431.1) E-value: 4.1e+2 Identity: 53.17% Query coverage: 74.26% Gaps: 13.89% Alignment: Query 72 UUAAUUUUGCUAUA---UACAUACUAUCCAUAAGACCUU-UUAGAGAUGCCCAGA---CUCUACUGCGGUGCUAGAUUGGGCAUCU---CU 152 || |||||||| |||| || || | ||||| | | |||||||| | | | | | |||| | | | | | | Sbjct 222 UUUGGGUUGCUAUAAAGUACAGACGAUUCUACCAACCUUGACACAAAUGCCCAGCUGCCCCCAGUUCAGUGCCACAGAGAAAAGCCUUGCA 312 Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG-----GUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUU 238 || | ||||| | |||| | | || || | ||||| | | | || ||||| | | | || |||| || Sbjct 313 GAACAGGUUGAG---UUUGUAGAUGGGCAUGCGGUAGACGGUAUCAU---CUCUUCUCUAUCAAUGACUU--GGGUGAUACUUCUGGCAAC 395 Query 239 ---CCGUCCUGUGACAUUCUGUGAUGUAGUCG---------UUAUUCAGUGAUAUAAUGAAUCUCACCUA 296 | | |||| ||| |||| | | | ||||||| ||| ||||||||| | ||| Sbjct 396 AAAACAGACAGUGAUGUUCAGUGAAGGUCUGGGCCUUCCAAUUAUUCACUGAAAUAAUGAAUUCCUGCUA 465 >> URS000196E923_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035022399.1) E-value: 4.1e+2 Identity: 69.49% Query coverage: 19.14% Gaps: 6.78% Alignment: Query 124 UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUG 181 || |||| | | | ||| | ||| | |||||||| | |||||||| ||| |||| Sbjct 7441 UCCACUG---CACCACAACGGGAAACUCCUGAAACUUUGUGUGUGUGUGUGUGUGUGUG 7496 >> URS00028341D4_62625 Varroa jacobsoni (Varroa mite) uncharacterized LOC111262822 E-value: 4.3e+2 Identity: 56.82% Query coverage: 42.57% Gaps: 2.27% Alignment: Query 64 ACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUU-UUAGAGAUGC-CCAGACUCUACUGCGGUGCUAGAUUGGGC-AUCU 150 |||| ||| |||||| ||| | || | ||| |||| | | ||| | ||||| ||| | || || | || Sbjct 172 ACUAAUGACUAAACAGGCUAUACGAAUAACACACAGGCUAACUUAGGAGAGCGGGGCAGGACACCACUGCUGUGGGUGUUUUAGCUACCU 261 Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUC 192 | | || || ||| ||| || |||||||| | | || Sbjct 262 CAAAGAAGAUUCGUGUGCGUGCGUGCGUGUGUGAGAGCUGUC 303 >> URS00026DB7A8_74358 Podarcis lilfordi non-coding RNA E-value: 4.4e+2 Identity: 59.79% Query coverage: 29.37% Gaps: 8.25% Alignment: Query 98 AUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCG-----GUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG---GUGUGUGUAUGUAUG 179 | | | ||| | ||| ||| | ||| | | || | | ||||| ||| |||||| | | |||||||||||| || Sbjct 44 GUGUGUCAUUUAAAAGAGACCCCGUGGAUACAGAGUACACAUGUUCCACUGGGCCUCUUUUAAAAGACUCACUGUGUGUGUGUAUGUCUG 133 Query 180 UGUGAGG 186 |||| | Sbjct 134 UGUGUGU 140 >> URS0001955A7E_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005030674.1) E-value: 4.5e+2 Identity: 59.42% Query coverage: 42.57% Gaps: 10.87% Alignment: Query 85 AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAU--CUCUUAAAACUUUGAG-GUGUGU 170 ||||| | | || ||||| | |||| || ||||| | ||| ||||| | || |||| | || | |||||| Sbjct 1539 UUACAUUCCCUAUGUAUCACCUUC---AAAUGCAAAGG-GCUACUACUGUGA--CCUUGGGAGUGACUGGCAAAAAUGUGUGUGUGUGU 1621 Query 171 GUAUGUAUGUG------UGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 || |||||||| || | || || ||||||| ||| ||| Sbjct 1622 GUGUGUAUGUGUGUGUGUGUGUGUCUGCACGUGCACAUGUACAUACAUG 1670 >> URS000262D5D4_29159 Crassostrea gigas (Pacific oyster) sRNA G11335 E-value: 4.8e+2 Identity: 63.44% Query coverage: 30.03% Gaps: 6.45% Alignment: Query 136 CUAGAUUGGGCAUCUCUUA--AAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAU 223 |||| || ||||||| | | ||| |||| ||||| || ||||| | | | ||| ||| ||| | | |||||||| Sbjct 121 UUAGACUGUGCAUCUCAAUGUACAGCUUGGGGUGAGUGUA--AAUCUGUGAUGUUCAA--CAUGGACACUCGUCAAUGUCAACUUCUGUC 206 Query 224 UGU 226 ||| Sbjct 207 UGU 209 >> URS00019681C6_56716 Cottoperca gobio (channel bull blenny) lncRNA (ENSCGOG00000014805.1) E-value: 4.9e+2 Identity: 60.92% Query coverage: 28.71% Gaps: 8.05% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACA 251 |||||||| ||| |||||| | ||+|||| ||| | + || || ||| ||| ||||| || ||| | |+ | | | Sbjct 988 GUGUGUGUGUGUGUGUGUGUGUAAUACCAGAAGCAAAACUACAUGAAAGAAA-------UGUUAUUCUUCCCAUCCCUUCCUUUAAA 1067 >> URS00008BC02D_9606 Homo sapiens (human) non-protein coding lnc-MED6-3:1 E-value: 5e+2 Identity: 63.10% Query coverage: 27.72% Gaps: 2.38% Alignment: Query 108 UUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAU 191 | || ||| |||| || | || ||| |||||| | || ||| | | |||||||| ||| |||||| | ||| Sbjct 680 UGAGUCCUGCACAGAAACUGCAGCCUUGCCAGAUUG--CUUCCCUUGGUGCAGAAAAGUGUGUGUGUGUGUGUGUGUGAAAUAU 761 >> URS00009AE178_10090 Mus musculus long non-coding RNA NONMMUT127317.1 E-value: 5e+2 Identity: 54.33% Query coverage: 35.31% Gaps: 15.75% Alignment: Query 144 GGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUG----UGUGAGGGUU----AUCAGAUGCACAUUC----GGAUAAAUGAACUUC 219 || || ||| || ||||| |||||| ||| || |||| | ||| | || | || || | | ||||||| | Sbjct 1140 GGUAUAUCUGAAGGUCCUGAGGGGUGUGUGUGUGUGUGUGUGUGUGUGUUGGCAAACAUACACAUAUAUAGAGGCAGAAAUGAAGCUU 1227 Query 220 UGAUUGUAAUUCU--------AGCCUUCCGUCCUGUGAC 250 | | || || | || | | ||||||| Sbjct 1228 GGCUAUUAUGCCUCUGGAGCCAACCCACUUUUCUGUGAC 1266 >> URS000194F286_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000046604.1) E-value: 5.1e+2 Identity: 59.42% Query coverage: 42.57% Gaps: 10.87% Alignment: Query 85 AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAU--CUCUUAAAACUUUGAG-GUGUGU 170 ||||| | | || ||||| | |||| || ||||| | ||| ||||| | || |||| | || | |||||| Sbjct 1475 UUACAUUCCCUAUGUAUCACCUUC---AAAUGCAAAGG-GCUACUACUGUGA--CCUUGGGAGUGACUGGCAAAAAUGUGUGUGUGUGU 1557 Query 171 GUAUGUAUGU------GUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 || ||||||| ||| | || || ||||||| ||| ||| Sbjct 1558 GUGUGUAUGUGUGUGUGUGUGUGUCUGCACGUGCACAUGUACAUACAUG 1606 >> URS000279B552_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 5.2e+2 Identity: 54.61% Query coverage: 49.50% Gaps: 9.21% Alignment: Query 118 CCAGACUCUACUGCGGUGCUAGAUUGGG-CAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 ||||| || | | ||| || || || || || |||| |||||||||| ||| | ||| |||||| ||| Sbjct 18397 UCAGACACUUCGCUGAAGCUUCAUCAGGUCAGUCCUCGAACCUUUAAGGUGUGUGUUUGUCAGGUGGAG----GUCAGAUCAUCAU 18478 Query 203 UCG-GAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCG 267 || ||| | | | || ||| || | || ||| ||| ||| |||| Sbjct 18479 UCCUGAUGUGUUCAG--------GGAAGUCUGUAAAUCUGAACUCUGAUGGUCUCUGAAUCAGUCA 18536 >> URS0002755DD2_74358 Podarcis lilfordi non-coding RNA E-value: 5.2e+2 Identity: 55.10% Query coverage: 46.53% Gaps: 7.48% Alignment: Query 102 GACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCU--UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 |||||| || | | ||| || |||| || || | | ||||| | || |||||||| ||| |||||| | | Sbjct 2301 GACCUUAGAG----GGCAGAACUACUUCGCAGUGCCAGUUUUGUUUGUUAAAAUAAAAUUGUG-UGUGUGUGUGUGUGUGUGUGUGUG 2383 Query 188 UUAUCAGAUGCACAUUCGGAUAAAUG---AAC-UUCUGAUUGUAAUUCUAGCCUUCCGU 242 | | | ||| |||| || | | | || |||| | ||| ||| | Sbjct 2384 UGUGCGCACGCAAAUUCCUGCAACCACCAAGCAUAUUGCUUGUCACUCUCCUUUUCUGA 2442 >> URS00022B93DB_9606 Homo sapiens (human) small nucleolar RNA host gene 10 E-value: 5.4e+2 Identity: 52.84% Query coverage: 55.45% Gaps: 11.36% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGAU--GCCCAGACUCUACUGCGGUGCUAG 139 || | ||| |||| || | || || | | | || || || | | | || || || ||| || || ||| | Sbjct 669 GGAAGUGACUUUCCUGGUAUGUAGCAAUUCAGAGAAUA--CAAAACCACAUUCAUUAUCUGAAAUGGGCUCAGCUGCUUCU---GUGUUUU 754 Query 140 AUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || | || |||||||| ||||||| ||||| | || | | |||| || | ||||| || ||| Sbjct 755 AUCAUAUAGAGCUGGGAACUUUGAUGUGUGUG-------GUGUGUGCGUGUUUUGCUGCAUAUACAGAUAAUCACACAACUGGAG 832 >> URS0002544489_9606 Homo sapiens (human) non-coding RNA E-value: 5.4e+2 Identity: 52.84% Query coverage: 55.45% Gaps: 11.36% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGAU--GCCCAGACUCUACUGCGGUGCU 137 || | ||| |||| || | || || | | | || || || | | | || || || ||| || || ||| | Sbjct 1455 GGAAGUGACUUUCCUGGUAUGUAGCAAUUCAGAGAAUA--CAAAACCACAUUCAUUAUCUGAAAUGGGCUCAGCUGCUUCU---GUGUU 1538 Query 138 AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || | || |||||||| ||||||| ||||| | || | | |||| || | ||||| || ||| Sbjct 1539 UUAUCAUAUAGAGCUGGGAACUUUGAUGUGUGUG-------GUGUGUGCGUGUUUUGCUGCAUAUACAGAUAAUCACACAACUGGAG 1618 >> URS0002345DE8_9606 Homo sapiens (human) HSALNT0378837 E-value: 5.4e+2 Identity: 52.84% Query coverage: 55.45% Gaps: 11.36% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGAU--GCCCAGACUCUACUGCGGUGCU 137 || | ||| |||| || | || || | | | || || || | | | || || || ||| || || ||| | Sbjct 1286 GGAAGUGACUUUCCUGGUAUGUAGCAAUUCAGAGAAUA--CAAAACCACAUUCAUUAUCUGAAAUGGGCUCAGCUGCUUCU---GUGUU 1369 Query 138 AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || | || |||||||| ||||||| ||||| | || | | |||| || | ||||| || ||| Sbjct 1370 UUAUCAUAUAGAGCUGGGAACUUUGAUGUGUGUG-------GUGUGUGCGUGUUUUGCUGCAUAUACAGAUAAUCACACAACUGGAG 1449 >> URS0002347167_9606 Homo sapiens (human) HSALNT0378841 E-value: 5.4e+2 Identity: 52.84% Query coverage: 55.45% Gaps: 11.36% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGAU--GCCCAGACUCUACUGCGGUGCU 137 || | ||| |||| || | || || | | | || || || | | | || || || ||| || || ||| | Sbjct 937 GGAAGUGACUUUCCUGGUAUGUAGCAAUUCAGAGAAUA--CAAAACCACAUUCAUUAUCUGAAAUGGGCUCAGCUGCUUCU---GUGUU 1020 Query 138 AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || | || |||||||| ||||||| ||||| | || | | |||| || | ||||| || ||| Sbjct 1021 UUAUCAUAUAGAGCUGGGAACUUUGAUGUGUGUG-------GUGUGUGCGUGUUUUGCUGCAUAUACAGAUAAUCACACAACUGGAG 1100 >> URS000253F638_9606 Homo sapiens (human) non-coding RNA E-value: 5.4e+2 Identity: 52.84% Query coverage: 55.45% Gaps: 11.36% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGAU--GCCCAGACUCUACUGCGGUGCUAG 139 || | ||| |||| || | || || | | | || || || | | | || || || ||| || || ||| | Sbjct 644 GGAAGUGACUUUCCUGGUAUGUAGCAAUUCAGAGAAUA--CAAAACCACAUUCAUUAUCUGAAAUGGGCUCAGCUGCUUCU---GUGUUUU 729 Query 140 AUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || | || |||||||| ||||||| ||||| | || | | |||| || | ||||| || ||| Sbjct 730 AUCAUAUAGAGCUGGGAACUUUGAUGUGUGUG-------GUGUGUGCGUGUUUUGCUGCAUAUACAGAUAAUCACACAACUGGAG 807 >> URS0000EED965_9606 Homo sapiens (human) HSALNT0378842 E-value: 5.4e+2 Identity: 52.84% Query coverage: 55.45% Gaps: 11.36% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGAU--GCCCAGACUCUACUGCGGUGCU 137 || | ||| |||| || | || || | | | || || || | | | || || || ||| || || ||| | Sbjct 1456 GGAAGUGACUUUCCUGGUAUGUAGCAAUUCAGAGAAUA--CAAAACCACAUUCAUUAUCUGAAAUGGGCUCAGCUGCUUCU---GUGUU 1539 Query 138 AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || | || |||||||| ||||||| ||||| | || | | |||| || | ||||| || ||| Sbjct 1540 UUAUCAUAUAGAGCUGGGAACUUUGAUGUGUGUG-------GUGUGUGCGUGUUUUGCUGCAUAUACAGAUAAUCACACAACUGGAG 1619 >> URS0002584963_9606 Homo sapiens (human) ncRNA E-value: 5.4e+2 Identity: 52.84% Query coverage: 55.45% Gaps: 11.36% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGAU--GCCCAGACUCUACUGCGGUGCU 137 || | ||| |||| || | || || | | | || || || | | | || || || ||| || || ||| | Sbjct 1455 GGAAGUGACUUUCCUGGUAUGUAGCAAUUCAGAGAAUA--CAAAACCACAUUCAUUAUCUGAAAUGGGCUCAGCUGCUUCU---GUGUU 1538 Query 138 AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || | || |||||||| ||||||| ||||| | || | | |||| || | ||||| || ||| Sbjct 1539 UUAUCAUAUAGAGCUGGGAACUUUGAUGUGUGUG-------GUGUGUGCGUGUUUUGCUGCAUAUACAGAUAAUCACACAACUGGAG 1618 >> URS0000EEE0B8_9606 Homo sapiens (human) HSALNT0378844 E-value: 5.4e+2 Identity: 52.84% Query coverage: 55.45% Gaps: 11.36% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGAU--GCCCAGACUCUACUGCGGUGCUAG 139 || | ||| |||| || | || || | | | || || || | | | || || || ||| || || ||| | Sbjct 644 GGAAGUGACUUUCCUGGUAUGUAGCAAUUCAGAGAAUA--CAAAACCACAUUCAUUAUCUGAAAUGGGCUCAGCUGCUUCU---GUGUUUU 729 Query 140 AUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || | || |||||||| ||||||| ||||| | || | | |||| || | ||||| || ||| Sbjct 730 AUCAUAUAGAGCUGGGAACUUUGAUGUGUGUG-------GUGUGUGCGUGUUUUGCUGCAUAUACAGAUAAUCACACAACUGGAG 807 >> URS00022B70E9_9606 Homo sapiens (human) small nucleolar RNA host gene 10 E-value: 5.4e+2 Identity: 52.84% Query coverage: 55.45% Gaps: 11.36% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGAU--GCCCAGACUCUACUGCGGUGCU 137 || | ||| |||| || | || || | | | || || || | | | || || || ||| || || ||| | Sbjct 1480 GGAAGUGACUUUCCUGGUAUGUAGCAAUUCAGAGAAUA--CAAAACCACAUUCAUUAUCUGAAAUGGGCUCAGCUGCUUCU---GUGUU 1563 Query 138 AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || | || |||||||| ||||||| ||||| | || | | |||| || | ||||| || ||| Sbjct 1564 UUAUCAUAUAGAGCUGGGAACUUUGAUGUGUGUG-------GUGUGUGCGUGUUUUGCUGCAUAUACAGAUAAUCACACAACUGGAG 1643 >> URS000256EB70_9606 Homo sapiens (human) non-coding RNA E-value: 5.6e+2 Identity: 52.84% Query coverage: 55.45% Gaps: 11.36% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGAU--GCCCAGACUCUACUGCGGUGCU 137 || | ||| |||| || | || || | | | || || || | | | || || || ||| || || ||| | Sbjct 937 GGAAGUGACUUUCCUGGUAUGUAGCAAUUCAGAGAAUA--CAAAACCACAUUCAUUAUCUGAAAUGGGCUCAGCUGCUUCU---GUGUU 1020 Query 138 AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || | || |||||||| ||||||| ||||| | || | | |||| || | ||||| || ||| Sbjct 1021 UUAUCAUAUAGAGCUGGGAACUUUGAUGUGUGUG-------GUGUGUGCGUGUUUUGCUGCAUAUACAGAUAAUCACACAACUGGAG 1100 >> URS00019535AD_9823 Sus scrofa (pig) lncRNA (ENSSSCG00015049965.1) E-value: 5.6e+2 Identity: 56.69% Query coverage: 33.66% Gaps: 19.69% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUU-UAGAGAUGCCCAGAC----UCUACUGCGGUGCUAGAUUGGGCA-----------UCUCUUA 154 || |||||| |||| |||||| || ||| | |||| || | ||||| ||| | | |||| | | | Sbjct 3758 UAAAUACAUUGUAUCACUAAGACAUUCAUAGUCAGUCCCAUACCAGCACCACUGCUGUGUGACCUCAGGCAGGUUAUUUUACUUCCCUG 3846 Query 155 AAACUUUGAG---------GUGUGUGUAUGUAUGUGUG 183 || ||| | |||||||| |||||||||| Sbjct 3847 AACCUUAGUUUCUGUGUGUGUGUGUGUGUGUAUGUGUG 3884 >> URS00019E16CB_9995 Marmota monax (woodchuck) non-coding RNA E-value: 5.6e+2 Identity: 62.63% Query coverage: 31.35% Gaps: 7.07% Alignment: Query 27 AAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUU-UUGCUAUAUAC--AUACUAUCCAUAAG-ACCUUUUAG 111 | ||||| | |||||| |||| ||||||| ||| || || ||| |||| || | ||||| ||| ||| | || | Sbjct 966 AGUCUUGGCC---AGAAGUUCCCUGGGGAGCAAAAUCACUUUCAGUUGAUUACUGCUUUAAUCCUAUACUUCCCAGAAGUAACUGCUUU 1051 Query 112 AGAUGCCCAG 121 || || | | Sbjct 1052 UGAAGCUCCG 1061 >> URS0000D19074_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 6e+2 Identity: 59.79% Query coverage: 30.36% Gaps: 5.15% Alignment: Query 21 CUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUU-ACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGAC 104 | |||| ||| |||| | | ||| |||| |||||| | |||| | ||||| ||| || ||| | | |||| | Sbjct 4332 CCUCACAUUCUAGAUGGAGAUGAGGUCCAGGGGUUGGCCCCUGCUGCCUCCUCACAAUUUGCAAUAGAUGUAAAUAGGACCAAUAAAUC 4420 Query 105 CUUUUAGA 112 |||| | Sbjct 4421 CUUUGGAA 4428 >> URS0001953608_9823 Sus scrofa (pig) lncRNA (ENSSSCG00065034845.1) E-value: 6e+2 Identity: 59.12% Query coverage: 42.24% Gaps: 10.95% Alignment: Query 85 AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAU--CUCUUAAAACUUUGAG-GUGUGU 170 ||||| | | || ||||| | |||| || ||||| | ||| ||||| | || |||| | || | |||||| Sbjct 1480 UUACAUUCCCUAUGUAUCACCUUC---AAAUGCAAAGG-GCUACUACUGUGA--CCUUGGGAGUGACUGGCAAAAAUGUGUGUGUGUGU 1562 Query 171 GUAUGUAUGUGUGAG------GGUUAUCAGAUGCACAUUCGGAUAAAU 212 || |||||||||| | || || ||||||| ||| || Sbjct 1563 GUGUGUAUGUGUGUGCGUGUGUGUCUGCACGUGCACAUGUACAUACAU 1610 >> URS0000CCE957_10116 Rattus norvegicus uncharacterized LOC102548743 E-value: 6e+2 Identity: 57.94% Query coverage: 33.99% Gaps: 4.67% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU----AUCAGAUGCACAUUCGGAUA 209 | ||| ||| || || |||||| || | | || || | |||||||||| ||| || ||| || | | Sbjct 1983 UGUUGCUGUGUCUGAAUG-GCAUCUUUUUAUAAAGAUGUCAGUCAGUCCGACUGUGUGAGGGCCCCGCUCCAGGAGCUCAUCCGAACA 2069 Query 210 AAUGAACUUCUGAUUGUAA 228 | ||| |||| |||||| Sbjct 2070 UACUAACCUCUGCUUGUAA 2088 >> URS000195A298_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025013613.1, ENSSSCG00045032249.1) E-value: 6e+2 Identity: 59.12% Query coverage: 42.24% Gaps: 10.95% Alignment: Query 85 AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAU--CUCUUAAAACUUUGAG-GUGUGU 170 ||||| | | || ||||| | |||| || ||||| | ||| ||||| | || |||| | || | |||||| Sbjct 1480 UUACAUUCCCUAUGUAUCACCUUC---AAAUGCAAAGG-GCUACUACUGUGA--CCUUGGGAGUGACUGGCAAAAAUGUGUGUGUGUGU 1562 Query 171 GUAUGUAUGUGUGAG------GGUUAUCAGAUGCACAUUCGGAUAAAU 212 || |||||||||| | || || ||||||| ||| || Sbjct 1563 GUGUGUAUGUGUGUGCGUGUGUGUCUGCACGUGCACAUGUACAUACAU 1610 >> URS000284BE57_7010 Schistocerca gregaria (Grasshoppers) uncharacterized LOC126295165 E-value: 6.2e+2 Identity: 64.71% Query coverage: 27.39% Gaps: 3.53% Alignment: Query 186 GGUUAUCAGAUGCACAUUCGGAUAAAUGA--ACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGU 268 ||||||| |||| ||| || |||| |||| | |||| || ||||| || |||| ||| |||||| || || Sbjct 357 CGUUAUCAUAUGCCCAUGCGUUGUAAUGUUGCUUUCUUACUGUAUUUGUAGCCAUCAGUCCCAAGACU-GGGGUGAUGCUGUAGU 440 >> URS000195E548_9823 Sus scrofa (pig) lncRNA (ENSSSCG00015031248.1) E-value: 6.4e+2 Identity: 59.42% Query coverage: 42.57% Gaps: 10.87% Alignment: Query 85 AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAU--CUCUUAAAACUUUGAG---GUGU 168 ||||| | | || ||||| | |||| || ||||| | ||| ||||| | || |||| | || | |||| Sbjct 1540 UUACAUUCCCUAUGUAUCACCUUC---AAAUGCAAAGG-GCUACUACUGUGA--CCUUGGGAGUGACUGGCAAAAAUGUGUGUGUGUGU 1622 Query 169 GUGUAUGUAUG----UGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 |||||||| || |||| | || || ||||||| ||| ||| Sbjct 1623 GUGUAUGUGUGUGUGUGUGUGUGUCUGCACGUGCACAUGUACAUACAUG 1671 >> URS00027EA3D9_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015033418.1) E-value: 6.6e+2 Identity: 68.85% Query coverage: 20.13% Gaps: 1.64% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 | || || |||| |||||||| ||| |||||| | || | ||||||| || || | Sbjct 1399 CAUAUAAAUUUGU-GUGUGUGUGUGUGUGUGUGUGUGUGUGAACAUGCACACUCAUGUAUA 1458 >> URS00027F4BF4_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015033418.1) E-value: 6.6e+2 Identity: 68.85% Query coverage: 20.13% Gaps: 1.64% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 | || || |||| |||||||| ||| |||||| | || | ||||||| || || | Sbjct 1107 CAUAUAAAUUUGU-GUGUGUGUGUGUGUGUGUGUGUGUGUGAACAUGCACACUCAUGUAUA 1166 >> URS00027F9EBC_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015033418.1) E-value: 6.6e+2 Identity: 68.85% Query coverage: 20.13% Gaps: 1.64% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 | || || |||| |||||||| ||| |||||| | || | ||||||| || || | Sbjct 1049 CAUAUAAAUUUGU-GUGUGUGUGUGUGUGUGUGUGUGUGUGAACAUGCACACUCAUGUAUA 1108 >> URS00027FB9FF_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015033418.1) E-value: 6.6e+2 Identity: 68.85% Query coverage: 20.13% Gaps: 1.64% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 | || || |||| |||||||| ||| |||||| | || | ||||||| || || | Sbjct 944 CAUAUAAAUUUGU-GUGUGUGUGUGUGUGUGUGUGUGUGUGAACAUGCACACUCAUGUAUA 1003 >> URS000198AD00_1608454 Sinocyclocheilus anshuiensis (blind barbel) lncRNA (ENSSANG00000046376.1) E-value: 6.7e+2 Identity: 53.95% Query coverage: 43.56% Gaps: 13.82% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUG-----CUAUAUACAUACUAUCCAUAAGA--------CCUUUUAGAGAUGCCCAGACUCU----A 127 | || ||| |||| || | | || || || || || | ||| | || || || ||||| | | Sbjct 105 CCAAGAUACCAUCCCUUGACUCUGACUUGUCAUCAUCAGACAAUGAAGGAGAGAUAUCUGUCCUUCAGCGACCACCAGAUAUUCACCA 192 Query 128 CUGCGGUGCUAGAUUGGGCAUC---UCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 | || | || | ||| | ||| |||||||||||||| ||| |||||| | || Sbjct 193 AAAGGAAGCAACAU-GAACAUGGAGAGUCCAAAAUUUGAGGUGUGUGUGUGUGUGUGUGUGUGU 255 >> URS000234DDB6_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC007907) E-value: 7e+2 Identity: 60.00% Query coverage: 33.99% Gaps: 6.67% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCC--GU 242 ||||||| |||||||| ||| |||||| | |||||| || | | |||| | +||| || +| | ||| |+ Sbjct 1710 CACUUUGAAGUGUGUGUGUGUGUGUGUGUGUGUUAUCCGAGAGAAGAAAAAAAAAAUUCAAACCUGCUUUCA-----AAAUAUCCAGGC 1793 Query 243 CCUGUGACAUUCUGUG 258 |||| || |||||| Sbjct 1794 UAUGUGUCAGUCUGUG 1809 >> URS00023F1EBD_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC007906) E-value: 7e+2 Identity: 60.00% Query coverage: 33.99% Gaps: 6.67% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCC--GU 242 ||||||| |||||||| ||| |||||| | |||||| || | | |||| | +||| || +| | ||| |+ Sbjct 2271 CACUUUGAAGUGUGUGUGUGUGUGUGUGUGUGUUAUCCGAGAGAAGAAAAAAAAAAUUCAAACCUGCUUUCA-----AAAUAUCCAGGC 2354 Query 243 CCUGUGACAUUCUGUG 258 |||| || |||||| Sbjct 2355 UAUGUGUCAGUCUGUG 2370 >> URS00027D2C90_74358 Podarcis lilfordi non-coding RNA E-value: 7.2e+2 Identity: 59.09% Query coverage: 35.31% Gaps: 7.27% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCA--UCUCUUAAAACUUUGAG-GUGUGUGUAUGUAU 178 | ||| | || | ||| | || | || || || || | ||| | | |||| | | ||| |||||||| ||| | Sbjct 39570 UCCUAAAAUCUGUGAGA-----CGAGUUUUUAUUGUUGUUCUCUUUGGGGAAAGGCACUUAGGGCAUAGAGUGUGUGUGUGUGUGU 39650 Query 179 GUGUGAGGGUUAUCAGAUGCACAU 202 ||||| | || || | |||| Sbjct 39651 GUGUGUGUGUACACACACACACAC 39674 >> URS00022B32EA_9555 Papio anubis (olive baboon) lncRNA (ENSPANG00000045095.1) E-value: 7.5e+2 Identity: 54.01% Query coverage: 59.74% Gaps: 10.16% Alignment: Query 61 AUUACUAUCC--UUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCA-- 147 ||| || || | | | ||||| ||| | || |||| ||| || ||||| || |||| |||| | | | Sbjct 350 AUUCCUGCCCACGUGGAGCUCACUAUAAACAACUGUUUCAAAAGAGGUUUAGAAG--GCCCA-----UAGAAAGGUGUUAGAAUAGAUACA 433 Query 148 UCUCUUAA-AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU-UCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 | ||| || | ||||||||||||||||||| || || | || ||| | |||||| | || || || Sbjct 434 UAUCUGUGUGUUAUUUAUGUGUGUGUAUGUAUGUGUGUUUUGCAUGAGUACAAAAUGAAGGACUAUUGAACUCAGGGUUCUAC------CC 518 Query 237 UUCCG 241 ||| Sbjct 519 CUCCU 523 >> URS000261E0A2_29159 Crassostrea gigas (Pacific oyster) sRNA G34744 E-value: 7.5e+2 Identity: 58.76% Query coverage: 30.36% Gaps: 5.15% Alignment: Query 158 CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU-----GAACUUCUGAUUGUAAUUCUAGCCUUCCGU 242 || || |||| ||| ||| | | | | ||| || ||| ||||| || | ||| ||| | || | | | |||||| Sbjct 218 AUUGCAGUCAUGUGAAUGGAUGCAUACGUGCUUCCAGUUGUCCAUCCGGAUUUAUUGGUAGUUCUUGUGAAUCAAAGUGCACCUUUCCGU 307 Query 243 CCUGUGA 249 ||| || Sbjct 308 CCUAUGG 314 >> URS000236B637_3888 Pisum sativum (pea) long non-coding RNA (PSAT_LNC008996) E-value: 7.5e+2 Identity: 50.84% Query coverage: 52.15% Gaps: 14.53% Alignment: Query 17 AGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGA 103 |||| |||| | | |||||| ||| || | | || || | ||||| | | ||||| || |||| ||| | Sbjct 17015 AGUCUCACACCAAGCUUCUGAAAAUGAGGUCGUAG-AAGG-GAAUAUAACACCCUUUGAACUCACUAUACACCUACUUGUCAUCAUG 17099 Query 104 CCUUUUAGAGAUGCCC-----------------AGACUCUACUGCGGUGCUAGAUUGGGCA----UCUCUUAAAACUUUGAGGUGUG 169 || | | ||| || | ||| | | || | | | || | |||||| ||||||| | | Sbjct 17100 GAUUACAAACAUGGCCCACUCAGAGGAAGACCCAACCUCAAUGGAGGCG---GCCUCCACAUCAGUUUCUUAAGUGUUUGAGGAGGG 17183 Query 170 UGUAU 174 || | Sbjct 17184 AGUUU 17188 >> URS000242D85C_3888 Pisum sativum (pea) long non-coding RNA (PSAT_LNC008996) E-value: 7.5e+2 Identity: 50.84% Query coverage: 52.15% Gaps: 14.53% Alignment: Query 17 AGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGA 103 |||| |||| | | |||||| ||| || | | || || | ||||| | | ||||| || |||| ||| | Sbjct 16696 AGUCUCACACCAAGCUUCUGAAAAUGAGGUCGUAG-AAGG-GAAUAUAACACCCUUUGAACUCACUAUACACCUACUUGUCAUCAUG 16780 Query 104 CCUUUUAGAGAUGCCC-----------------AGACUCUACUGCGGUGCUAGAUUGGGCA----UCUCUUAAAACUUUGAGGUGUG 169 || | | ||| || | ||| | | || | | | || | |||||| ||||||| | | Sbjct 16781 GAUUACAAACAUGGCCCACUCAGAGGAAGACCCAACCUCAAUGGAGGCG---GCCUCCACAUCAGUUUCUUAAGUGUUUGAGGAGGG 16864 Query 170 UGUAU 174 || | Sbjct 16865 AGUUU 16869 >> URS0002427BC4_3888 Pisum sativum (pea) long non-coding RNA (PSAT_LNC008996) E-value: 7.5e+2 Identity: 50.84% Query coverage: 52.15% Gaps: 14.53% Alignment: Query 17 AGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGA 103 |||| |||| | | |||||| ||| || | | || || | ||||| | | ||||| || |||| ||| | Sbjct 16724 AGUCUCACACCAAGCUUCUGAAAAUGAGGUCGUAG-AAGG-GAAUAUAACACCCUUUGAACUCACUAUACACCUACUUGUCAUCAUG 16808 Query 104 CCUUUUAGAGAUGCCC-----------------AGACUCUACUGCGGUGCUAGAUUGGGCA----UCUCUUAAAACUUUGAGGUGUG 169 || | | ||| || | ||| | | || | | | || | |||||| ||||||| | | Sbjct 16809 GAUUACAAACAUGGCCCACUCAGAGGAAGACCCAACCUCAAUGGAGGCG---GCCUCCACAUCAGUUUCUUAAGUGUUUGAGGAGGG 16892 Query 170 UGUAU 174 || | Sbjct 16893 AGUUU 16897 >> URS00009BA10A_10090 Mus musculus long non-coding RNA NONMMUT041631.2 E-value: 7.6e+2 Identity: 60.42% Query coverage: 31.68% Gaps: 1.04% Alignment: Query 63 UACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCU 152 || ||||||| | ||| | | || || || || ||||| || | ||| | || | || || | ||||||||| ||| | Sbjct 482 UAGAAUCCUUUCAGCUUGAGCUCUUCAAACGAUG-AUUAGACCAAUUUUACAUGUCUAGUCACUGAGGCCGCAGUAGAUUGGGACUCUUU 570 Query 153 UAAAAC 158 | | Sbjct 571 CUAUAU 576 >> URS00009B54EF_9595 Gorilla gorilla long non-coding RNA NONGGOT000665.1 E-value: 7.7e+2 Identity: 57.62% Query coverage: 48.51% Gaps: 8.61% Alignment: Query 129 UGCGGUGCUAGAUU-GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUU 218 || | ||| ||| | | || || |||||| || ||||||| ||| |||||| | | || | ||||| || | | Sbjct 613 UGAGUUGCCAGACUUUGAGAUUUCAUAAAACAGUG---UGUGUGUGUGUGUGUGUGUGUAUAUACACACACACAUAUGG------CAGGGU 694 Query 219 CUGAUUGUAAUU--CUAGCCUUCCGUCCUGUGAC-AUUCUGUGAUGUAGUCGUUAUUCAG 275 || | ||| || || || || | ||| | |||| | |||| || || || Sbjct 695 CUUACUGUGGUUGCUCAGGCUAGUGUGCAGUGGCUAUUCACAGGUGUAAUCAUUGCACAC 754 >> URS0000BC5173_10141 Cavia porcellus (domestic guinea pig) lncRNA (ENSCPOG00000035863.1) E-value: 7.8e+2 Identity: 77.08% Query coverage: 15.84% Gaps: 4.17% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUU 203 | || |||||||||||||||+||||| ||| || || ||||| ||+ Sbjct 3044 AUCUAUGAGGUGUGUGUAUGCAUGUGAGAGCGUG--CACAUGCAUAUC 3089 >> URS00026EC78D_74358 Podarcis lilfordi non-coding RNA E-value: 8e+2 Identity: 61.29% Query coverage: 28.05% Gaps: 8.60% Alignment: Query 101 AGACCUUUUAGAGAUGCCCAGACUCUACUGCG-----GUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG---GUGUGUGUAUGUAUGU 180 | | ||| | ||| ||| | ||| | | || | | ||||| ||| |||||| | | |||||||||||| ||| Sbjct 3192 UGUCAUUUAAAAGAGACCCCGUGGAUACAGAGUACACAUGUUCCACUGGGCCUCUUUUAAAAGACUCACUGUGUGUGUGUAUGUCUGU 3279 Query 181 GUGAG 185 ||| | Sbjct 3280 GUGUG 3284 >> URS00025E55E1_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000055612.1) E-value: 8.1e+2 Identity: 55.30% Query coverage: 42.57% Gaps: 12.88% Alignment: Query 53 GUUGCAAAAUUACUAUCCUUUAAU-UUUGCUAUA--UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGA 140 || | ||||| ||| || || || || ||| ||| | | ||||| | || ||| |||| | || Sbjct 381 GUCUUAGAAUUAUUAUUAUUAAAACAGUGUUAACCUCACAGACUCCCUAAAAGACUCUC---AGGGGCCAAGACCCCUCU----------- 457 Query 141 UUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUG 181 ||||||||||| || ||| |||||| || |||| Sbjct 458 CUGGGCAUCUCUGGCCACCCUGAACUGUGUGCCUGGUUGUG 498 >> URS000283EE68_543639 Dermacentor silvarum (Tick) endoribonuclease ZC3H12A-like E-value: 8.3e+2 Identity: 62.38% Query coverage: 33.00% Gaps: 4.95% Alignment: Query 125 CUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGG-UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 | || || || | | ||| | ||| | | || ||||||| ||||||| || | || |||||| | | ||||||| Sbjct 8543 CCACAGCUAAGCAAACCAAGACAUUUUGUAAGUCCAAGGGGUUGUGUGUUUGUAUGUAUGUGUGUAUGUAGAUGCUC-UGCGGAUAA 8628 Query 211 AUGAACUUCUGAUU 224 | ||||||| | Sbjct 8629 A---ACUUCUGCCU 8639 >> URS0002791926_74358 Podarcis lilfordi non-coding RNA E-value: 8.4e+2 Identity: 57.89% Query coverage: 33.00% Gaps: 14.04% Alignment: Query 84 UAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGAC-------UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAA------ACUU 160 ||||| || | | || | ||| | ||| |||||| | |||| | | | ||| ||| ||||| || Sbjct 38 CAUACACACACACAGUGAGUCUUUUAAAAGAGGCCCAGUGGAACAUGUGUACUCUGUA--UCCACGGGGUCUCUUUUAAAUGACACACCC 125 Query 161 UGAG-GUGUGUGUAUGUAUGUGUG 183 || | |||||||| ||| |||||| Sbjct 126 UGUGUGUGUGUGUGUGUGUGUGUG 149 >> URS00026AF141_74358 Podarcis lilfordi non-coding RNA E-value: 8.7e+2 Identity: 50.00% Query coverage: 47.85% Gaps: 13.16% Alignment: Query 37 AAAACGAGUUCCAUGGGUUGCAAAAUUACU---AUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCC 119 || |||| | |||| ||| ||| || ||||| | | || | | ||| | |||| | || || |||| | Sbjct 18075 UGAAGGAGUCACCAGGGUCUCAAUAUUCCUCUUAUCCUCCAGCU---CUCUUGAUUUACAAACCAUGAUUCCACUUGAAGAUUCU- 18156 Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUG 181 | | | | || || ||| | | |||||||| ||| |||| Sbjct 18157 GGUUUUAAACAAGCAGCCAGGUUGAGACACGUG---------UGUGUGUGUGUGUGUGUGUGUGUG 18213 >> URS00022F3EF2_9031 Gallus gallus (chicken) non-coding RNA E-value: 8.7e+2 Identity: 53.44% Query coverage: 39.93% Gaps: 7.63% Alignment: Query 54 UUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUU----------UUAGAGAUGCCCAGACUCUACUGCG 132 | | |||| | ||| |||||| | | ||| ||| ||| || |||||| | || ||| | |||| || || Sbjct 9787 UAGUAAAACUGAUAUGCUUUAAAUGUAUUAUUGUGAUAGAAUCUGUAGGACCUUGUGAUGAACUCUGGACCUGCUCUGACUUCACAGCC 9875 Query 133 GUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 | ||| | || || | | | |||| | || | Sbjct 9876 GGUAGAGACCCAGUGUCCCUCUAUAUUGGGAGGCAUUUGCAC 9917 >> URS000199C5CF_8032 Salmo trutta (brown trout) lncRNA (ENSSTUG00000035934.1) E-value: 9e+2 Identity: 66.20% Query coverage: 22.11% Gaps: 5.63% Alignment: Query 27 AAUCUUGAUGAAAACGAGUU-CCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA---UACAUACU 93 | ||||||| | |||| |||||||||||| | | ||||| | |||| ||| ||||||| Sbjct 249 AGACUUGAUGCAUGCGAGCAGAGAUGGGUUGCAAAGCUGGCACCCUUUGACUUUGAUAUCCAGUACAUACC 319 >> URS0001986DA3_8032 Salmo trutta (brown trout) lncRNA (ENSSTUG00000038457.1) E-value: 9e+2 Identity: 66.20% Query coverage: 22.11% Gaps: 5.63% Alignment: Query 27 AAUCUUGAUGAAAACGAGUU-CCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA---UACAUACU 93 | ||||||| | |||| |||||||||||| | | ||||| | |||| ||| ||||||| Sbjct 103 AGACUUGAUGCAUGCGAGCAGAGAUGGGUUGCAAAGCUGGCACCCUUUGACUUUGAUAUCCAGUACAUACC 173 >> URS000217E43B_9925 Capra hircus (Goat) lncRNA (ENSCHIG00010030642.1) E-value: 9.1e+2 Identity: 66.67% Query coverage: 18.81% Gaps: 0.00% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA 209 | |||| |||||| |||||| ||||| | || | || | ||||| |||| Sbjct 662 UGAAACCAGUGGGUGUGCGUAUGUGGGUGUGUGUGUGAACAUACACACAUCUGGAUG 718 >> URS00022B1AA2_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000071977.1) E-value: 9.3e+2 Identity: 58.90% Query coverage: 39.93% Gaps: 17.81% Alignment: Query 142 UGGGCAUCUCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUG---------AGGGUUAUCAGAUGC-----ACAUUCGGAUA-AAUGA 214 | ||| ||| |||| | || | |||||||| ||| |||||| || | | |||||| ||||| || | | | Sbjct 1495 UCCCCAUGUCUAAAAAGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUUAAGAGGUGGCAGAUGUGCUAGACAUUUGGCUCCACUUC 1583 Query 215 ACUUCUGAUUGU---AAUUCUAGCCUUCCGU----CC--UGUGACAUUCUGUGAUGU 262 ||||| ||| || ||| | ||| | || || | |||| || || ||| Sbjct 1584 ACUUCAGAUGGUCUGAAUACCAGCAUC-AGUAUCACCUGUAUGACUUUUUGCUAUGG 1639 >> URS0002609AC7_266040 Hyalomma asiaticum (Tick) mir-8489 microRNA precursor family E-value: 9.4e+2 Identity: 70.91% Query coverage: 18.15% Gaps: 0.00% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAA 215 || ||||||||| ||| |||||| | || || || ||||| || ||| | | Sbjct 10 UGUGGUGUGUGUGUGUGUGUGUGUGCGUGUACAUAUACACAUACGCAUAUACAUA 64 >> URS00008117FD_9606 Homo sapiens (human) TCF21 antisense RNA inducing promoter demethylation E-value: 9.6e+2 Identity: 62.67% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGA 184 || ||||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| Sbjct 2032 AUUUUUAGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 2106 >> URS00007ACBCD_9606 Homo sapiens (human) TARID transcript 5 E-value: 9.6e+2 Identity: 62.67% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGA 184 || ||||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| Sbjct 1423 AUUUUUAGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 1497 >> URS00008117F6_9606 Homo sapiens (human) TCF21 antisense RNA inducing promoter demethylation E-value: 9.6e+2 Identity: 62.67% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGA 184 || ||||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| Sbjct 1423 AUUUUUAGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 1497 >> URS00007A97F6_9606 Homo sapiens (human) TARID transcript 3 E-value: 9.6e+2 Identity: 62.67% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGA 184 || ||||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| Sbjct 1650 AUUUUUAGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 1724 >> URS00007A6437_9606 Homo sapiens (human) TARID transcript 1 E-value: 9.6e+2 Identity: 62.67% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGA 184 || ||||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| Sbjct 2251 AUUUUUAGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 2325 >> URS000081201F_9606 Homo sapiens (human) TCF21 antisense RNA inducing promoter demethylation E-value: 9.6e+2 Identity: 62.67% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGA 184 || ||||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| Sbjct 1650 AUUUUUAGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 1724 >> URS00008117FD_9606 Homo sapiens (human) TCF21 antisense RNA inducing promoter demethylation E-value: 9.6e+2 Identity: 62.67% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGA 184 || ||||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| Sbjct 2032 AUUUUUAGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 2106 >> URS0000811A2E_9606 Homo sapiens (human) TCF21 antisense RNA inducing promoter demethylation E-value: 9.6e+2 Identity: 62.67% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGA 184 || ||||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| Sbjct 1563 AUUUUUAGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 1637 >> URS0000811705_9606 Homo sapiens (human) TCF21 antisense RNA inducing promoter demethylation E-value: 9.6e+2 Identity: 62.67% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGA 184 || ||||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| Sbjct 2250 AUUUUUAGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 2324 >> URS0000790CE4_9606 Homo sapiens (human) TARID transcript 2 E-value: 9.6e+2 Identity: 62.67% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGA 184 || ||||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| Sbjct 2033 AUUUUUAGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 2107 >> URS0000CCED08_10116 Rattus norvegicus uncharacterized LOC103691782 E-value: 9.8e+2 Identity: 60.64% Query coverage: 31.02% Gaps: 12.77% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUU 253 ||||||| ||| |||||| |||| | | | || || ||| || | | |||||| |||||| || ||||| | Sbjct 1884 UGUGUGUGUGUGUGUGUGUGGGUGU------GUA-AGUCAGA-----AAACAGCUUACAGGAAUUCUCUCCUUCCCUCAUGUGAGUUC 1959 Query 254 CUGUGA 259 | | | Sbjct 1960 CAGGAA 1965 >> URS00025E665A_10090 Mus musculus (mouse) predicted gene 12610 E-value: 1e+3 Identity: 49.79% Query coverage: 69.31% Gaps: 23.61% Alignment: Query 15 CCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGAC 104 |||| | | || | || | | |||||| || | || |||||||| |||| || ||| || | Sbjct 64 CCAGCU-----CUCUUCUGGUAAAUAAGCGUUCCAG---------AAAU-GUAAGCUUUAAUUGGGCUAG-------CUGACCACAAAUC 131 Query 105 CUUUUAGAGAUGCCCAGACUCUA----------------CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-------GUGUGUG 171 || | ||||| || || ||| || || | || | || ||| | || | ||||||| Sbjct 132 AUUACAAAGAUGGAAUGAGUCAUUUGGUGGCAAAGAUGUCUGAGGGUCUGAAGUGACAACCUUCUAAUUGUGUGUGUGUGUGUGUGUGUG 221 Query 172 UAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 | ||| |||||||||| ||| | || | |||| ||||||| | Sbjct 222 UGUGUGUGUGUGAGGG-------GUGCUCCUU---GUGAAUGGACUUCUGUGU 264 >> URS00027690EF_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1e+3 Identity: 58.59% Query coverage: 40.59% Gaps: 5.47% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAU--CAGAUGCACAUUCGGAUAAAUGAACU--UCUGAUUGUAAUUCUAGCCU 237 | || ||||||||| | || ||||||||| || || || |||| | | || | | | ||| ||| || ||| Sbjct 25091 ACAUUGGAGGUGUGUAUCUGAAUGUGUGAGUGUGUGUGCACAUACACAC--ACACACGUGGAGUUGUAUGACUGUGUUUUAGGCCA 25174 Query 238 UCCGUCCUGUGACAUUC-UGUGAUGUAGUCGUUAUUCAGUGA 278 | | | | || || | |||| ||| | | |||| | Sbjct 25175 UGUGAGGGGAGUCAGUCAUAUGAUUUAGCAGAAAAACAGUCA 25216 >> URS00009BEC8F_10090 Mus musculus long non-coding RNA NONMMUT000758.2 E-value: 1.1e+3 Identity: 62.96% Query coverage: 26.73% Gaps: 6.17% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCU 245 |||||||| ||| |||||| | || || ||||||| | | || || || ||| || | | | | ||||| Sbjct 2761 GUGUGUGUGUGUGUGUGUGUGUGUAUACACAUGCACACCAGAAGAA---GACAUCAGAUCCCAACUGAA--CCUAGGUCCU 2836 >> URS00027F7ADB_9793 Equus asinus (ass) lncRNA (ENSEASG00005026965.1) E-value: 1.1e+3 Identity: 52.98% Query coverage: 44.88% Gaps: 17.22% Alignment: Query 74 AAUUUUGCUAUAUACAUACUAUC-----CAUAAGACCUUU---UAGAGAUGCCCA--GACUCUACUGC-----GGUGCUAGAUUGGGCA 147 ||| || |||||| | || | || | |||| || |||| | ||||| ||| || | | | |||| || Sbjct 4346 AAUCUUAAUAUAUAAACACAGGCAACAUCACAUGACCAUUUCCUAGACACGCCCACAGACCCUGAUUCCAGCCACUUCUAGGG--GGG- 4431 Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA 209 | | | |||||||| | ||| |||||| |||| ||| | ||| Sbjct 4432 --------ACCGUCUGAGUGUGUGUGCGCAUGAGUGAGGUUUAUUGAGGCGUGAUUUGCAUA 4485 >> URS00025EDAED_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000113136.1) E-value: 1.1e+3 Identity: 61.63% Query coverage: 25.08% Gaps: 13.95% Alignment: Query 113 GAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAA------A----ACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 | | || | | ||||| || || ||||||||| | | ||||||| |||||||| ||| |||||| | || Sbjct 1102 CACACACAUAAUGAACUGCUGUUCUCC--CUGGCAUCUCUACAGAGAAAAACGCACUUUGAAGUGUGUGUGUGUUUGUGUGUGUGU 1185 >> URS0001954344_7994 Astyanax mexicanus (Pachon cavefish) lncRNA (ENSAMXG00005011134.1) E-value: 1.1e+3 Identity: 54.55% Query coverage: 35.97% Gaps: 18.18% Alignment: Query 103 ACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGU------------G 181 || ||| | ||| |||| || | ||| |++ || | ||||| |+| | |||||||| ||| ||| | Sbjct 670 ACUUUUAAAAGAAUCCCAAACGUUUCUGU--------ACCAAUCAAAUAUUAAACCCUAGGAGUGUGUGUGUGUGUGUGUGUGUGUGUGUG 752 Query 182 UGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 |||||| | |||+|| | | ||| ||| Sbjct 753 UGAGGG-AGUUAGACGCCCGUG-GGAAAAA 780 >> URS00025F1671_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000113136.1) E-value: 1.1e+3 Identity: 61.63% Query coverage: 25.08% Gaps: 13.95% Alignment: Query 113 GAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAA------A----ACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 | | || | | ||||| || || ||||||||| | | ||||||| |||||||| ||| |||||| | || Sbjct 1097 CACACACAUAAUGAACUGCUGUUCUCC--CUGGCAUCUCUACAGAGAAAAACGCACUUUGAAGUGUGUGUGUGUUUGUGUGUGUGU 1180 >> URS0002373C28_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC019569) E-value: 1.1e+3 Identity: 57.89% Query coverage: 43.89% Gaps: 4.51% Alignment: Query 52 GGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUA 138 ||| | | ||| | || |||| | | | || || | ||| || |||||| ||| ||| | || | | Sbjct 26970 GGUCCUACAUAGACUUUUAUUCAAUU-GGUUUUUUAACCAC-AACCAAGUGAUAAAUUAGAG----CCAUACUUAUUUACGUGCCCA 27050 Query 139 GAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 |||| | ||| ||| | | | ||||| ||||||||||| || Sbjct 27051 AGUUGGAAACCUCAUAAUAUCUAGUGGUGUAUGUAUGUAUGUAUGU 27096 >> URS0000D1E973_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 1.1e+3 Identity: 61.18% Query coverage: 27.06% Gaps: 8.24% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUUGGGCAUCU--CUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 |||| | || | ||| || | ||| || |||| | || | |||||||| ||| |||||| | | ||| ||| Sbjct 2132 CACUCCAGCCUGGCGACAGAGUGAGACUCUGUCUCAAAAAUAUGUGUGUGUGUGUGUGUGUGUGUGUGUG----UGUAUGGGCAU 2212 >> URS00027E8E3C_9793 Equus asinus (ass) lncRNA (ENSEASG00005028206.1) E-value: 1.1e+3 Identity: 57.43% Query coverage: 33.33% Gaps: 14.85% Alignment: Query 26 CAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGA 114 | |||||| ||||| | | || | |||| || ||| || | ||| | |||||| | | | | | |||| Sbjct 1055 CUAUCUUGCUGAAACCCACUUUCCUGGGCUGAAAAUAUAUUGACCU------UGGCUAUAACCU---------UGACAUUUAGGAGAGU 1128 Query 115 UGCCCAGACUCU 126 || | ||||||| Sbjct 1129 UGACUAGACUCU 1140 >> URS00026B8298_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.1e+3 Identity: 56.35% Query coverage: 39.60% Gaps: 4.76% Alignment: Query 70 CUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGA-CCUUUUAGAGAUGCCCAGACUCUACUGCGGUG-----CUAGAUUGGGCAUC 149 || |||| |||| | |||| | | ||| | | ||||| | | | | | | || || | | ||| | | Sbjct 11906 AUUGAAUUCUGCUUCAGACAUCUUGUUCAUUAAAUCCUUUCAUAUCCUUCUUUGCCCGUCCGCCGUCCCUCUCCACAUUCUGUUGC 11991 Query 150 UCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU 189 ||| || ||| |||||||||| ||| | | ||| | Sbjct 11992 UCUCUGAAGUUUAAGGUGUGUGUGUGUGAGAGAGAGAGAG 12031 >> URS0001A10258_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.2e+3 Identity: 52.17% Query coverage: 44.55% Gaps: 22.98% Alignment: Query 80 GCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAG---AC---------------UCUACUGCGGUGCUAGAUUGGGCAUCU 150 | | | |||||| | | | || |||| |||| | ||| || ||| || | || || | ||| | Sbjct 2095 GGUUCACACAUACCAGCUCUGAGUCCUU---GAGAAACUCAGUUGACUACAGUGAGCUUCCAUCUCCUCCUCUGUUAUGUGGGGGCU-- 2178 Query 151 CUUAAAACUUUGAG--------GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGA 214 || || | || | |||||||| ||| |||||| | ||| | ||||| |||| || Sbjct 2179 CUCAAGAGUUAAAUGGGAAACUGUGUGUGUGUGUGUGUGUGUGUGUU------UACACAUCUGGAUGGGUGU 2244 >> URS00009BF13F_10090 Mus musculus long non-coding RNA NONMMUT029396.2 E-value: 1.3e+3 Identity: 55.23% Query coverage: 48.84% Gaps: 15.70% Alignment: Query 138 AGAUUGGGCAUCUCUUAAA--ACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU-----UAUCAGAUGCACAUU-----CGGAUAAAUGAA 215 || | || || | ||||| | | || |||||||| ||| ||||||| || || || ||||| ||| | | || Sbjct 102 AGCUAGGACAGUUUUUAAAAAAUUAUGUGGUGUGUGAGUGUGAGUGUGAGUGUGUGUGUACAAGCAGCACAGGUAUGGAGGACAGAGGAC 191 Query 216 CUUCUGAUUGUAA-----------UUCUAGCCUUC-CGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAAUG 285 |||| | || || ||||| | | || | ||| | |||| | || | | |||| |||| || Sbjct 192 AAUCUGGGUACAAAAUUGAAGAAACUCCUUCCUUCUCCUUCUUUCCCAUCCA--GAUGGA-UCAUCAGUCAGAGAUACCCUG 270 >> URS000240BDDC_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC000382) E-value: 1.3e+3 Identity: 59.77% Query coverage: 27.72% Gaps: 3.45% Alignment: Query 147 AUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGU---GAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUU 230 | | || ||| |||| |||||||| | ||| | ||| | | |||| | | | || |||||||| || ||| | Sbjct 11056 ACCCCUAAAAUAGUUGAACUGUGUGUACGCAUGGGCUUCCAGGUCCUGCGUACGCACGAUUGAAAAAUUGAACUUCCGAAGCUAAAU 11142 >> URS0000ED3A51_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 1.3e+3 Identity: 55.56% Query coverage: 42.90% Gaps: 10.42% Alignment: Query 83 AUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCC--------------CAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAA 155 | | || | || | | || | ||||||| || | | || || ||| | || | | || || || Sbjct 4321 ACCUCCAGAUCAUUCUUCAGGCUUUUUAGAUAUUUCUGCUUUGAGUUCUUCUGAAGUUAUUGCCGAACUUAUUAAGUUAUUGCUGAA 4407 Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 | | || |||||||| ||| |||||| | ||| ||| ||||| | || ||| Sbjct 4408 GAGUGUGU-GUGUGUGUGUGUGUGUGUGUGUGUUGAAUGAUACACAUACUGAGAAAG 4463 >> URS0000ECE592_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 1.3e+3 Identity: 55.56% Query coverage: 42.90% Gaps: 10.42% Alignment: Query 83 AUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCC--------------CAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAA 155 | | || | || | | || | ||||||| || | | || || ||| | || | | || || || Sbjct 4321 ACCUCCAGAUCAUUCUUCAGGCUUUUUAGAUAUUUCUGCUUUGAGUUCUUCUGAAGUUAUUGCCGAACUUAUUAAGUUAUUGCUGAA 4407 Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 | | || |||||||| ||| |||||| | ||| ||| ||||| | || ||| Sbjct 4408 GAGUGUGU-GUGUGUGUGUGUGUGUGUGUGUGUUGAAUGAUACACAUACUGAGAAAG 4463 >> URS000195E248_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025070480.1) E-value: 1.3e+3 Identity: 54.73% Query coverage: 42.24% Gaps: 14.19% Alignment: Query 58 AAAAUUACUAUCCUUUAAUUUU----------G----CUAUAUACAUACUAUCCAUAAGACC--UUUUAGAGAUGCCCAGACUCUACUGCG 132 || +|| |||| |||| |||| | +|+| ||||| || | +||||| | + | || + |||||| | || || Sbjct 653 AAGCCUAUUAUCUUUUAUUUUUUGAGGUGUUUGUAGAACACAGACAUAAAAUUC-CAAGACUAAUACAACAGCCACCCAGAAUUUAUGGCA 742 Query 133 GUGCUAGAUUGGGCAUCU----CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 | | || ||||| | |+| ||||| | |||||| ||| |||||| | Sbjct 743 CUUAAUGUUUUGGCAUAUUUGUUUCAGGCCUUUGUGAAGUGUGUGUGUGUGUGUGUG 799 >> URS00022B6E48_10116 Rattus norvegicus (Norway rat) lncRNA (ENSRNOG00000067543.1) E-value: 1.3e+3 Identity: 55.80% Query coverage: 35.64% Gaps: 22.46% Alignment: Query 77 UUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCC---------CAGACUCUACUGCGGUGCUAGAUUG------GGC 146 || ||||||||| |||| ||||| | || | |||||| || ||| |||| || || |||| | ||| Sbjct 422 CUUACUAUAUACAGACUACCCAUAGGUUCUGUGACUCUAGAGAACCCUGACUAAUACAGUUUCUAUUGGGGCU-UAGAAAGCAGCAUGGC 510 Query 147 AUC--------UCUUAAAACUUUGAGGUGUGUG--UAUGUAUGUGUGA 184 || | || ||| || |||||| ||| ||||||| Sbjct 511 AUGAUCAAGAUUUGUAGGGCUUAGAUAUGUGUGCACAUGCAUGUGUGU 558 >> URS00020C03B1_175245 uncultured fungus partial contains small subunit ribosomal RNA, internal transcribed spacer 1, and 5.8S ribosomal RNA E-value: 1.3e+3 Identity: 64.29% Query coverage: 23.10% Gaps: 11.43% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUG 225 | ||| | ||||| ||| |||||||| || ||||||||| | ||| ||| || | || | Sbjct 119 AGCUUGCAUGUGUGCAUAUAUAUGUGUG--------CAUAUGCACAUUUGCAUAUAUGCACAUGUGCAAG 180 >> URS0000EE4D83_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 1.3e+3 Identity: 55.56% Query coverage: 42.90% Gaps: 10.42% Alignment: Query 83 AUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCC--------------CAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAA 157 | | || | || | | || | ||||||| || | | || || ||| | || | | || || || | Sbjct 807 ACCUCCAGAUCAUUCUUCAGGCUUUUUAGAUAUUUCUGCUUUGAGUUCUUCUGAAGUUAUUGCCGAACUUAUUAAGUUAUUGCUGAAGA 895 Query 158 CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 | || |||||||| ||| |||||| | ||| ||| ||||| | || ||| Sbjct 896 GUGUGU-GUGUGUGUGUGUGUGUGUGUGUGUUGAAUGAUACACAUACUGAGAAAG 949 >> URS0002379755_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC007800) E-value: 1.3e+3 Identity: 53.48% Query coverage: 59.74% Gaps: 4.81% Alignment: Query 100 AAGACCUUUUAGAGAUGCCCA--GACUCUACUGCGGUGCUAGAUUGGGCAUCUCUU--AAAACUUUGAGGUGUGUGUAUGUAUGUGU 182 ||| |||| || || | | | |||| || || || || ||||| | | | | || | | ||| | Sbjct 26326 AAGGCCUUGAAGUGACGGACGACGUGUCUAUUGUGGAGCA-CCUUCAGCAUCCGGUGUACAUCACCGAAGGAUC-UUAUACCAACAU 26410 Query 183 GAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUC--UAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCG 267 | ||| || | | || | || ||| | | | ||||| | ||| | |||| ||| || ||| ||| ||| || Sbjct 26411 CAAGGUAAUGAAACAUACUAACUGAAGCUUGA-UUCUUUACUGUAAACCAAUAGUAAGCAGUCCAGUGCCAGUCUCUGACGUAAACG 26496 Query 268 UUAUUCAGUGAUA 280 || |||||| Sbjct 26497 UUUCUCAGUGUAU 26509 >> URS000271EF5A_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.3e+3 Identity: 50.85% Query coverage: 54.79% Gaps: 11.30% Alignment: Query 22 UACACAAUCUUGAUGAAAACGAGUUCCAUGG-----GUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGAC 104 ||||| || ||| ||| |||| ||| | | ||| ||| || | | | | || |||| || | | Sbjct 1329 CACACA-CACAGAGGAACACGUGUUCAGUGGACUCAGGUUCAACAUUUUAAUAACUGAUCAUCUCCAUGUACAAACCGGAUACA---- 1411 Query 105 CUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU------CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 | | | | | || ||| | | || | ||||| | ||| | || |||||||| ||| |||||| | Sbjct 1412 -GUGACGCGUCAUUCUGCUUCAACUUC--CACCAGGUCAGGCAUAAUGAGGGCG-AAAGCCUUUGUGUGUGUGUGUGUGUGUGUGUGU 1495 Query 187 G 187 | Sbjct 1496 G 1496 >> URS00026C78A3_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.3e+3 Identity: 55.17% Query coverage: 33.66% Gaps: 16.38% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAU--CUCUUAAAACUUUG-AGGUGUGUGUAUGUAUGUGUGAGGGU-------UAUCAG--- 194 | ||||| | ||||| | || | | || |||| | |||||||| ||| |||||| | || | ||| Sbjct 7040 AUACUCUGC-----UGCUAACUCAAACACACAUUGUCAAGGUUUGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUCACACU 7122 Query 195 -AUGCACAUUCGGAUAAAUGAACUUCUG 221 | |||| || | | ||||| || Sbjct 7123 CACACACACUCACAGAGAUGAAUGACUU 7150 >> URS00009AFADD_10090 Mus musculus long non-coding RNA NONMMUT029397.2 E-value: 1.4e+3 Identity: 55.23% Query coverage: 48.84% Gaps: 15.70% Alignment: Query 138 AGAUUGGGCAUCUCUUAAA--ACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU-----UAUCAGAUGCACAUU-----CGGAUAAAUGAA 215 || | || || | ||||| | | || |||||||| ||| ||||||| || || || ||||| ||| | | || Sbjct 102 AGCUAGGACAGUUUUUAAAAAAUUAUGUGGUGUGUGAGUGUGAGUGUGAGUGUGUGUGUACAAGCAGCACAGGUAUGGAGGACAGAGGAC 191 Query 216 CUUCUGAUUGUAA-----------UUCUAGCCUUC-CGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAAUG 285 |||| | || || ||||| | | || | ||| | |||| | || | | |||| |||| || Sbjct 192 AAUCUGGGUACAAAAUUGAAGAAACUCCUUCCUUCUCCUUCUUUCCCAUCCA--GAUGGA-UCAUCAGUCAGAGAUACCCUG 270 >> URS000241CD89_2711 Citrus sinensis (sweet orange) long non-coding RNA (CSIN_LNC001902) E-value: 1.4e+3 Identity: 58.16% Query coverage: 32.34% Gaps: 5.10% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCU 237 || ||| |||| || || |||| ||| |||||| | | || || || | | || || || | ||| || | Sbjct 61290 CUGAAAUCUUUCAGUUGCGUGUGUGUGUGUGUGUGUGC-----GAAGCUCAGAUCAGAAGAGAAAUUUGAGAAGCAUACUCUCGCUU 61371 Query 238 UCCGUCCUGUG 248 |||||| || Sbjct 61372 AUCGUCCUCUG 61382 >> URS000198164B_8032 Salmo trutta (brown trout) lncRNA (ENSSTUG00000039848.1) E-value: 1.4e+3 Identity: 61.80% Query coverage: 29.37% Gaps: 2.25% Alignment: Query 32 UGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCA 120 || |||| |||||||||| | ||| || | |||||||||| ||| | | || || | | || || | |||| || Sbjct 35 UGGUGAAGACGAGUUCCAGGUAGUGCGAAUAGCCCCAGCUUUAAUUUUUCUACCUUCU--CUCUCUAGGCGGCCCUUGUGUCAUGCUCA 121 >> URS000206734C_1709941 fungal sp. partial internal transcribed spacer region E-value: 1.4e+3 Identity: 61.84% Query coverage: 25.08% Gaps: 11.84% Alignment: Query 74 AAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUC 149 |||||| | ||||| || | |||| || || || | || |||||||||| ||| |||||| Sbjct 54 AAUUUUCC--CAUACAAACCAACCAUGUGAACUGUUGA-------UUGGCUUUACUGCGGUGUAAGAGUGGGCAAU 120 >> URS0000BDB54F_885580 Fukomys damarensis (Damara mole rat) lncRNA (ENSFDAG00000028420.1) E-value: 1.4e+3 Identity: 63.33% Query coverage: 29.70% Gaps: 6.67% Alignment: Query 5 UGCGUGACAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACU 93 |||||||| ||||| || |||| || ||| || | | || ||| ||| ||||| |||| | || ||| ||| || | Sbjct 507 UGCGUGACUUCCAGC-CUGGACAAAUGUGG--GGAACUAGGUGCUUG---UGCGAAACUACUACACUUUCCUCUUCCUAAAUAUAUUAU 589 Query 94 A 94 Sbjct 590 U 590 >> URS00023D3C2A_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC001198) E-value: 1.4e+3 Identity: 67.09% Query coverage: 22.77% Gaps: 15.19% Alignment: Query 17 AGUCCUACACAAU------CUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUAC----UAUCCUUUAAUUUUGCUAUA 85 |||||| |||| ||||||||| | |||||||||| | ||||||| || || ||||| ||||| | Sbjct 51263 AGUCCUGGACAACAUCUCAUUUGAUGAAAUCAAGUUCCAUGGAA--CCAAAUUACAGUUUACCCCUUAAUGUUGCUGUG 51339 >> URS0001998A5D_8175 Sparus aurata (gilthead seabream) lncRNA (ENSSAUG00010009106.1) E-value: 1.4e+3 Identity: 57.78% Query coverage: 27.06% Gaps: 8.89% Alignment: Query 104 CCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCU--------AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 ||||| || | | | | ||||| || || || ||| ||||| || | |||||||||||| |||||| | Sbjct 838 CCUUUCUGAUACUGCUACUCAGCACUGCAGUACUGUAGCAACAGGAUGGAUCUCUCUCUUAAUAUGUGUGUGUGUGUAUGUGUGUGUGUG 927 >> URS00023B889F_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC001198) E-value: 1.4e+3 Identity: 67.09% Query coverage: 22.77% Gaps: 15.19% Alignment: Query 17 AGUCCUACACAAU------CUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUAC----UAUCCUUUAAUUUUGCUAUA 85 |||||| |||| ||||||||| | |||||||||| | ||||||| || || ||||| ||||| | Sbjct 51193 AGUCCUGGACAACAUCUCAUUUGAUGAAAUCAAGUUCCAUGGAA--CCAAAUUACAGUUUACCCCUUAAUGUUGCUGUG 51269 >> URS00008C23B2_9606 Homo sapiens (human) non-protein coding lnc-MTRNR2L1-2:4 E-value: 1.5e+3 Identity: 56.83% Query coverage: 45.21% Gaps: 4.32% Alignment: Query 100 AAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGU-GAGGGUU 189 ||| || | |||| || ||| ||||||||| |||| | | ||| | | | |||| | | || || | || | | Sbjct 392 AAGCGCUCUGAGAGGAGCACAGGCUCUACUGCAGUGCCUGGACGUCUUCCUC---AUGCAGUUCCGUGUUUCUCUGCCUGGGCAGAAGAUG 479 Query 190 AUCAGAUGCACAUUC-GGAUAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 | |||| | || |||| ||| | || | || || | |||| Sbjct 480 GUGCUAUGCUUACUCAGGAUGAAU-ACUGUCAUAGUGGAAGUUUAGCU 526 >> URS00009B1832_10090 Mus musculus long non-coding RNA NONMMUT054029.2 E-value: 1.5e+3 Identity: 48.13% Query coverage: 70.63% Gaps: 8.41% Alignment: Query 37 AAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACU 124 | | | || || |||| || | ||| || | | | | || || ||| | || | | |||| | Sbjct 949 ACAUCAGGUCCCCUGGGGCCUGAACUCACUGUCAUCUGCAAGAACAGCAAGCACUCUUAACAUCUGGGCUCU-----CUUUCCAGCCC 1031 Query 125 CUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 | | || | || | | ||| | ||||||||| ||| |||||| | || |||| |||||| Sbjct 1032 CAGAU-----GCAAAGUUUGAAAAAAUUUAUUGUGCGGUGGUGUGUGUGUGUGUGUGUGUGUGUGUGUAGAUCA----GAGGAUAAC- 1109 Query 213 GAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGAC 250 | | | | |||| |||||| | |||| Sbjct 1110 ---UUGCAGGAGUCAGUUCUCCCCUUCCACCACGUGAG 1144 >> URS0002867E08_9913 Bos taurus (cattle) lncRNA (ENSBTAG00000060416.1) E-value: 1.5e+3 Identity: 52.53% Query coverage: 50.17% Gaps: 6.33% Alignment: Query 38 AAACGAGUUCCAUGGGUUGCAAAAUUA------CUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGA 122 | | || |||| | |||| ||| |||| ||||| | ||| |||||| || | | |||| |||| Sbjct 248 ACAGGAUAUCCAGUGUUUGCUGAAUGCCAGGACCUAUGCUUUAUCGUAUUUAUGCCAUAACUAUCUAUGGGGUCACACAGAG----UCAGA 334 Query 123 CUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU 189 | | |||| ||| | | | ||| ||| | | |||| ||||||||| | | | Sbjct 335 CACGACUGAAGUGACUUAGCAACAACCAUAUAAGGCUUGGUGAAUGGUGUGUGUAUGUGUAGGAGCU 401 >> URS0001A1E7A8_183150 Oryzias sinensis (Chinese medaka) lncRNA (ENSOSIG00000014720.1) E-value: 1.5e+3 Identity: 61.54% Query coverage: 25.74% Gaps: 6.41% Alignment: Query 159 UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 || ||||||| |||| ||||||||||| | ||||| | ||| |||| | || | | | |||| Sbjct 318 CUUUCAGUGUGUGCAUGUGUGUGUGAGGGUG-----GUUUACAUUAAGCUAAGUGAAUAUUUGGUAGCACAGUCAGCC 390 >> URS000284537E_274614 Schistocerca cancellata (South American locust) uncharacterized LOC126184702 E-value: 1.5e+3 Identity: 54.00% Query coverage: 33.00% Gaps: 8.00% Alignment: Query 84 UAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGU 172 || || || | | | || ||| | | | | ||| || ||| ||| ||| ||| | | |||||||| Sbjct 780 CAUCCACACAAGCAAGAAUGCCUCACACACACACUCAGUCUGGUCUGAAAUGCCAGAAAUAGCAAUCGUG-------U-GUGUGUGUGU 860 Query 173 AUGUAUGUGUG 183 ||| |||||| Sbjct 861 GUGUGUGUGUG 871 >> URS0002758F21_74358 Podarcis lilfordi non-coding RNA E-value: 1.5e+3 Identity: 68.75% Query coverage: 15.84% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 |||||||| ||| |||||| | || || |+ ||||+ | ||||| Sbjct 344 CGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACAUAAA 391 >> URS00009C2309_9606 Homo sapiens (human) non-protein coding lnc-ELAC2-3:3 E-value: 1.6e+3 Identity: 61.86% Query coverage: 31.02% Gaps: 6.19% Alignment: Query 122 ACUCUACUGCGGUGCUAGAUUGGGCAUC--UCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 |||| | || | ||| || | || ||| |||| | || | |||||||| ||| |||||| | || ||| ||| || Sbjct 2143 ACUCCAGCCUGGCGACAGAGUGAGACUCCGUCUCAAAAAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUGGGCAUCU-GA 2230 Query 208 UAAAUGAA 215 ||||| Sbjct 2231 --UAUGAA 2236 >> URS00025DAF34_9606 Homo sapiens (human) non-coding RNA E-value: 1.6e+3 Identity: 61.86% Query coverage: 31.02% Gaps: 6.19% Alignment: Query 122 ACUCUACUGCGGUGCUAGAUUGGGCAUC--UCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 |||| | || | ||| || | || ||| |||| | || | |||||||| ||| |||||| | || ||| ||| || Sbjct 2141 ACUCCAGCCUGGCGACAGAGUGAGACUCCGUCUCAAAAAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUGGGCAUCU-GA 2228 Query 208 UAAAUGAA 215 ||||| Sbjct 2229 --UAUGAA 2234 >> URS00009BB564_10090 Mus musculus long non-coding RNA NONMMUT013319.2 E-value: 1.6e+3 Identity: 59.74% Query coverage: 25.41% Gaps: 0.00% Alignment: Query 167 GUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUC 243 |||||| ||| |||||| | | || |||| | |||| || || || || | ||| | || || | Sbjct 268 GUGUGUGUGUGUGUGUGUGUGAGCUCGAGUGCAUGCACUCAUAAGUGCACAGCUUAUGGCAAUCAGACCCAGCCACC 344 >> URS00025E9B2F_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000061402.1) E-value: 1.6e+3 Identity: 48.68% Query coverage: 53.80% Gaps: 19.05% Alignment: Query 47 CCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUU----AGAGAUGCCCAGACUCUACUGC 131 || ||| |||||| | || ||| | |||| | || ||| | || ||| ||| | ||| || | || Sbjct 5587 CCCAGGGCUGCAAAGACCCCCUCAUUUC-CUCUGCUCUCUAAAUAAGACUCAGAAGCAAUUUGCCAGAAAGAAGCAAAACGUC------ 5668 Query 132 GGUGCUAGAUUGGGCAUCUCUUA---AAACU----------UUGAG---------GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGC 198 || || | ||| | || || || | | |||||||| ||| |||||| | || || ||| Sbjct 5669 ---AGUAAUUUUGCCAUUUUAUACCAAAGCUCAAUAGUGCUCAGUGCAUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCAUGUGC 5754 Query 199 ACAUUCGGAUA 209 || | | Sbjct 5755 ACGGGUGUGCA 5765 >> URS0000BC54BF_10089 Mus caroli (Ryukyu mouse) Mir205 host gene (MGP_CAROLIEiJ_G0004612.1) E-value: 1.6e+3 Identity: 58.40% Query coverage: 35.64% Gaps: 14.40% Alignment: Query 140 AUUGGGCAU----CUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUA------UCAGAUGCACAUUCGG------AUAAA 211 ||||| || | | | ||| ||||||| | ||| ||| |||||||| |||| | | || || || || Sbjct 1611 AUUGGCUAUACCACCCAGAGUACUCUGAGGUGGGAACAUGAAUGCUUGAGGGUUUGAGUAUUCAGGUCCUCACCAGGUCCUGAAUGAA 1698 Query 212 UGAACUUCUGAUUGUAAUUCUAGCCUUCC-GUCCUGU 247 |||| ||| || ||| | | ||| ||||||| Sbjct 1699 UGAAUGAAUGAAUG-AAUACAGGUAUUCAGGUCCUGU 1734 >> URS000240500A_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC001096) E-value: 1.6e+3 Identity: 58.95% Query coverage: 31.35% Gaps: 3.16% Alignment: Query 54 UUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGA 140 || ||||| | | ||| | |||||||| | | | | || ||| | || || ||||| | | ||| || | || Sbjct 20801 UUUUCCAAUUAGUUUACUUAAUGUUUGCUAUUUCCCA---ACCGAUUUCACCAUCUAUAGGGGCCCAAAUUAGACUUGGGCCCGAGU 20884 Query 141 UUGGGCAU 148 |||||| Sbjct 20885 UUGGGCCG 20892 >> URS0002368CCD_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC005749) E-value: 1.6e+3 Identity: 48.22% Query coverage: 53.80% Gaps: 17.26% Alignment: Query 23 ACACAAUCUUGAUGAAAACGAGUUC--CAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACA---------UACUAUCC 97 ||||| |||||||| | | | | || | | | || ||| |||| |||| || | | | | ||| | | Sbjct 37881 UCACAAACUUGAUGAGAGCAACGGCAGUUUGAGCUUCCCGAUCACUCGCCUUCAAUUGUGGAAGACAGACACAGAGGAUACCAGUC 37966 Query 98 AUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGG-----------------------GCAUCUCUUAAAACUU 160 ||| | | |||| | || | | | | ||||| | | |||| ||| Sbjct 37967 UCAAGUCUUGGGAGAGGGUUGCUGAAUGCAACCUGAGCCCAGAUUAGCUCUUUUUGAUUUGAAUAACUAGCAUUAUCUUUCUUCUU 38052 Query 161 UGAGGUGUGUGUAUGUAUGUGUGAG 185 | |||||||| ||| |||||| | Sbjct 38053 UUUUGUGUGUGUGUGUGUGUGUGUG 38077 >> URS000195BA41_9823 Sus scrofa (pig) lncRNA (ENSSSCG00015044081.1) E-value: 1.6e+3 Identity: 54.11% Query coverage: 41.58% Gaps: 14.38% Alignment: Query 61 AUUACUAUCCUUUAAUUUU----------G----CUAUAUACAUACUAUCCAUAAGACC--UUUUAGAGAUGCCCAGACUCUACUGCGGUG 135 +|| |||| |||| |||| | +|+| ||||| || | +||||| | + | || + |||||| | || || | Sbjct 656 CCUAUUAUCUUUUAUUUUUUGAGGUGUUUGUAGAACACAGACAUAAAAUUC-CAAGACUAAUACAACAGCCACCCAGAAUUUAUGGCACUU 745 Query 136 CUAGAUUGGGCAUCU----CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 | || ||||| | |+| ||||| | |||||| ||| |||||| | Sbjct 746 AAUGUUUUGGCAUAUUUGUUUCAGGCCUUUGUGAAGUGUGUGUGUGUGUGUGUGU 800 >> URS000198CC90_1608454 Sinocyclocheilus anshuiensis (blind barbel) lncRNA (ENSSANG00000009390.1) E-value: 1.7e+3 Identity: 51.23% Query coverage: 64.03% Gaps: 15.27% Alignment: Query 25 ACAAUCUUGAUGAAAAC-GAGUUCCAUGGGUUGCAAAAUUACUAU---CCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCU 106 |||||| | || | || ||| | ||||| | | | ||| | || | | || | |||||| | || Sbjct 1684 ACAAUCAUCCUGUCAUUAUGGUGCCAGGUUUUGCACAGUCAAUAUUUCCUCAGAAGUGUUCUGCACCCAUACUGA---AACAUUCU 1766 Query 107 UUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAAC--UUUGAG---GUGUGUGUAUGUAUGUGUGAGGG 187 || || ||| | | |||||| || || |||||| ||||||| ||| |||||| | | Sbjct 1767 CUUGAAGCAGCCAAUA-------------------AAAAGAUCUCUGAACACGUUUUGAGUUUAUGUGUGUGUGUGUGUGUGUGUG 1833 Query 188 UUAUCAGAUGCACAUUCGGAUAAAUGAACUU 218 | || ||| | || || | ||| | | Sbjct 1834 UGUUCUGAUAUAUGUUAUGACAGAUGUAGGU 1864 >> URS00027FCCD3_9796 Equus caballus (horse) lncRNA (ENSECAG00000047627.1) E-value: 1.7e+3 Identity: 51.11% Query coverage: 36.63% Gaps: 17.78% Alignment: Query 100 AAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAG-------AUUGGGC-----------------AUCUCUUAAAACUUUGAGGU 166 | |||||| ||| || ||||||| | | || ||| | |||| | || || |||| || Sbjct 727 AGGACCUUCUAGUGAGGCCCAGAGCAGAGAGAGGGAAUAGGACCCUGAGAGGGCAGGAAAUUCGCCCAGAAAGCUUUUUAAACCCUGCCAA 817 Query 167 GUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 ||| | || ||||||||| | ||| ||||| | | | Sbjct 818 GUGCUUGACUAGCUGUGAGGGUCACCAGUAGCACAGGCUAUUUA 861 >> URS0002414C99_3694 Populus trichocarpa (black cottonwood) long non-coding RNA (PTRI_LNC000362) E-value: 1.7e+3 Identity: 59.17% Query coverage: 35.31% Gaps: 11.67% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU--UCGGAUAAAUGAACUUC--------UGAUUGUAAUU 230 ||| | || |||| ||| ||||| ||||| || | |||| ||| | || || || | | |||| ||| | Sbjct 120598 AACAUCCUGGGCUGUGAAUGGAUGUGCUAGGGUGAUAAAAUGCCCAUAAUUGGUGAAGCGAUCAACAAUGACCAUGAUAGUAUCU 120682 Query 231 CUAGCCUUCCGUCCU---GUGACAUUCUGUGAUGU 262 || || ||| | | | | | |||| ||| || Sbjct 120683 CU-GCUUUCGGAUUUUGGGAGCCCUUCUAUGAAGU 120716 >> URS0002377267_3067 Volvox carteri (V. carteri) long non-coding RNA (VCAR_LNC003368) E-value: 1.7e+3 Identity: 66.67% Query coverage: 20.79% Gaps: 0.00% Alignment: Query 180 UGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGU 242 | | | ||| ||| ||||| || | |||||||||| | |||||||| | |||| | Sbjct 35190 UUUCACUGUUGUCACAUGCAUUUUGGUCAAAAUGAACUUGAGCUUGUAAUUUUUGCCUCGGGA 35252 >> URS0002364722_3067 Volvox carteri (V. carteri) long non-coding RNA (VCAR_LNC003368) E-value: 1.7e+3 Identity: 66.67% Query coverage: 20.79% Gaps: 0.00% Alignment: Query 180 UGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGU 242 | | | ||| ||| ||||| || | |||||||||| | |||||||| | |||| | Sbjct 34731 UUUCACUGUUGUCACAUGCAUUUUGGUCAAAAUGAACUUGAGCUUGUAAUUUUUGCCUCGGGA 34793 >> URS00023CE6C7_3694 Populus trichocarpa (black cottonwood) long non-coding RNA (PTRI_LNC000361) E-value: 1.7e+3 Identity: 59.17% Query coverage: 35.31% Gaps: 11.67% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU--UCGGAUAAAUGAACUUC--------UGAUUGUAAUU 230 ||| | || |||| ||| ||||| ||||| || | |||| ||| | || || || | | |||| ||| | Sbjct 121047 AACAUCCUGGGCUGUGAAUGGAUGUGCUAGGGUGAUAAAAUGCCCAUAAUUGGUGAAGCGAUCAACAAUGACCAUGAUAGUAUCU 121131 Query 231 CUAGCCUUCCGUCCU---GUGACAUUCUGUGAUGU 262 || || ||| | | | | | |||| ||| || Sbjct 121132 CU-GCUUUCGGAUUUUGGGAGCCCUUCUAUGAAGU 121165 >> URS0000EBCFD5_9606 Homo sapiens (human) HSALNT0242912 E-value: 1.8e+3 Identity: 54.87% Query coverage: 34.65% Gaps: 8.85% Alignment: Query 123 CUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGU---G-----AGGGUUAUCAGAUGCACAUU 203 | | || | | | | | || || |||| ||||||||||||| | ||| | || || |||| |||||| | Sbjct 1971 UCCCAAGGCAGCCCCCAACUAGAUUUCCCUCAAAAUG--CAGGUGUGUGUAUGGGUAUGUAGAGAAGGUAGAGUAAUCACAUGCACCAU 2057 Query 204 CGGAUAAAUGAACUUCUGAUUGUA 227 |||||| || || || Sbjct 2058 AUUUUAAAUGUCGACCUAUUUUUA 2081 >> URS0001978618_9823 Sus scrofa (pig) lncRNA (ENSSSCG00015018867.1) E-value: 1.8e+3 Identity: 58.70% Query coverage: 27.72% Gaps: 13.04% Alignment: Query 112 AGAUGCCCAGACUCUACUGCGGUGCU----AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU----GUGUGAGGGUUAUCAG 194 || | |||||||| |||| | | | | || | || | ||| || |||||||| ||| | ||||| | || ||| Sbjct 325 AGUUCCCCAGACUGCCCUGCAGAGAUGCUUCCACUGAGGAUG--UG--AACACUGCAGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUCCAG 411 Query 195 A 195 | Sbjct 412 A 412 >> URS0002625764_2607531 Octopus sinensis (East Asian common octopus) uncharacterized LOC118767938 E-value: 1.8e+3 Identity: 57.14% Query coverage: 32.34% Gaps: 3.06% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUG 248 || ||||||||| ||| |||||| | | | | | | | || || |||| ||||| || || || | | | | Sbjct 19 UGUGGUGUGUGUGUGUGUGUGUGUG--U-ACACCACACCCCCUGCGAGAACUGAAUAUCUGACCUCAAAUCAAGAGUCACCACACAGG 103 Query 249 ACAUUCUGUG 258 ||| | || Sbjct 104 UCAUCUUUUG 113 >> URS00025F012A_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000084301.1) E-value: 1.9e+3 Identity: 61.11% Query coverage: 29.70% Gaps: 2.22% Alignment: Query 32 UGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAG 121 || |||| |||||||||| | ||| || | |||||||||| ||| | | || || | | || || | |||| || Sbjct 131 UGGUGAAGACGAGUUCCAGGUAGUGCGAAUAGCCCCGGCUUUAAUUUUUCUACUUUCU--CUCUCUAGGCGGCCCUUGUGUCAUGCUCAA 218 >> URS0002400EED_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC020602) E-value: 1.9e+3 Identity: 59.04% Query coverage: 26.73% Gaps: 2.41% Alignment: Query 109 UAGAGAUGCCCAGACUCUAC--UGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU 189 | ||||||| | || | || ||| || | ||| || ||||| |||||||| ||| |||| ||| | Sbjct 275900 GACAGAUGCCGAUACGUUGUGUAUACAUGAGAGAACGGUCUUCUAUUUGUACUUUUGUGUGUGUGUGUGUGUGUGAGAGAGAG 275982 >> URS000194DC43_9823 Sus scrofa (pig) lncRNA (ENSSSCG00060049526.1) E-value: 1.9e+3 Identity: 54.11% Query coverage: 41.58% Gaps: 14.38% Alignment: Query 61 AUUACUAUCCUUUAAUUUU----------G----CUAUAUACAUACUAUCCAUAAGACC--UUUUAGAGAUGCCCAGACUCUACUGCGGUG 135 +|| |||| |||| |||| | +|+| ||||| || | +||||| | + | || + |||||| | || || | Sbjct 656 CCUAUUAUCUUUUAUUUUUUGAGGUGUUUGUAGAACACAGACAUAAAAUUC-CAAGACUAAUACAACAGCCACCCAGAAUUUAUGGCACUU 745 Query 136 CUAGAUUGGGCAUCU----CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 | || ||||| | |+| ||||| | |||||| ||| |||||| | Sbjct 746 AAUGUUUUGGCAUAUUUGUUUCAGGCCUUUGUGAAGUGUGUGUGUGUGUGUGUGU 800 >> URS0001977357_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005000908.1) E-value: 1.9e+3 Identity: 58.18% Query coverage: 34.32% Gaps: 6.36% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGAC--CUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU----CUUAAAACUUUGAGGU 166 +|+| ||||| || | +||||| | + | || + |||||| | || || | | || ||||| | |+| ||||| | Sbjct 692 CACAGACAUAAAAUUC-CAAGACUAAUACAACAGCCACCCAGAAUUUAUGGCACUUAAUGUUUUGGCAUAUUUGUUUCAGGCCUUUGUGAA 781 Query 167 GUGUGUAUGUAUGUGUGAG 185 |||||| ||| |||||| | Sbjct 782 GUGUGUGUGUGUGUGUGUG 800 >> URS00021F13F3_52904 Scophthalmus maximus (turbot) lncRNA (ENSSMAG00000022643.1) E-value: 1.9e+3 Identity: 69.84% Query coverage: 20.79% Gaps: 0.00% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAA 228 ||||||| ||| |||||| ||| |||||| ||||| ||| || | | ||||||| Sbjct 1625 UGUGUGUGUGUGUGUGUGUCUGUUUUCAGAUUCACAUAAGGAGAACGCAGCAGGUGAUUGUCC 1687 >> URS000238E797_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC020602) E-value: 1.9e+3 Identity: 59.04% Query coverage: 26.73% Gaps: 2.41% Alignment: Query 109 UAGAGAUGCCCAGACUCUAC--UGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU 189 | ||||||| | || | || ||| || | ||| || ||||| |||||||| ||| |||| ||| | Sbjct 276215 GACAGAUGCCGAUACGUUGUGUAUACAUGAGAGAACGGUCUUCUAUUUGUACUUUUGUGUGUGUGUGUGUGUGUGAGAGAGAG 276297 >> URS00025F6DF5_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000084301.1) E-value: 1.9e+3 Identity: 61.11% Query coverage: 29.70% Gaps: 2.22% Alignment: Query 32 UGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAG 121 || |||| |||||||||| | ||| || | |||||||||| ||| | | || || | | || || | |||| || Sbjct 48 UGGUGAAGACGAGUUCCAGGUAGUGCGAAUAGCCCCGGCUUUAAUUUUUCUACUUUCU--CUCUCUAGGCGGCCCUUGUGUCAUGCUCAA 135 >> URS0000EB6D74_9606 Homo sapiens (human) HSALNT0225786 E-value: 2e+3 Identity: 59.26% Query coverage: 44.55% Gaps: 14.81% Alignment: Query 55 UGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUG 143 | ||| | |||| |||| || ||| ||| || || ||| | || ||| | | ||||| || ||| || Sbjct 1121 UUCAAGUUCACUAAACUUUUCUUCUGCAGCAUAAAUCCUGUCCCAACUACUUUUCAU-----CUCAGACA---------UGGUAGUUU- 1194 Query 144 GGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU 189 |||||||||| | | |||||||| ||| |||||| | || Sbjct 1195 -UCAUCUCUUAAUUC----AUGUGUGUGUGUGUGUGUGUGUGUGUA 1235 >> URS0000EA81C5_9606 Homo sapiens (human) HSALNT0225785 E-value: 2e+3 Identity: 59.26% Query coverage: 44.55% Gaps: 14.81% Alignment: Query 55 UGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUG 143 | ||| | |||| |||| || ||| ||| || || ||| | || ||| | | ||||| || ||| || Sbjct 1121 UUCAAGUUCACUAAACUUUUCUUCUGCAGCAUAAAUCCUGUCCCAACUACUUUUCAU-----CUCAGACA---------UGGUAGUUU- 1194 Query 144 GGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU 189 |||||||||| | | |||||||| ||| |||||| | || Sbjct 1195 -UCAUCUCUUAAUUC----AUGUGUGUGUGUGUGUGUGUGUGUGUA 1235 >> URS000235F7F2_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC000334) E-value: 2e+3 Identity: 58.76% Query coverage: 31.68% Gaps: 12.37% Alignment: Query 200 CAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAG-UGAUAUAAUG 285 ||| || ||| || | | ||| ||| ||||| | ||||| ||| | || || | ||||| |||||| | Sbjct 13089 CAUCCGAGGAAAGGAUC--CAGAU---------GAUCUUUCGUCCAGGGACAUCAUGUUAGGUGAUCCAUUUUCAGUUGAUAUUACA 13164 Query 286 AAUCUCACCU 295 || ||||| Sbjct 13165 AAACUCACUG 13174 >> URS00019F4983_9995 Marmota monax (woodchuck) non-coding RNA E-value: 2e+3 Identity: 55.79% Query coverage: 26.07% Gaps: 16.84% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUG-------------AGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU---UCUGAUUGUAAUUCUA 233 | ||||||||| ||| |||||| || ||| | | ||| | || | |||||| ||||| | || ||| Sbjct 1765 CGUGGUGUGUGUGUGUGUGUGUGUGUGUGUUGAAAGGGGUUUAACCCAGGCAGACUCUACCAUCUGAACUACCUCUGACUCUACCUCUU 1853 Query 234 GCCUUC 239 || | Sbjct 1854 CCCAGC 1859 >> URS00019A8754_9995 Marmota monax (woodchuck) non-coding RNA E-value: 2e+3 Identity: 58.33% Query coverage: 37.95% Gaps: 5.83% Alignment: Query 84 UAUACAUACU----AUCCAUAAGACCUUUUAGAGAUG-CCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGG 165 ||||| || | ||| ||| || || || ||| | ||| ||| ||| | || ||| | | || || | Sbjct 45596 CAUACAGGCUAAGCAACCACUCUACCAUUGAGCUAUAACCCUAGCCCUAAUGCUGUGUCUGUCUGUCUGUCUGUCUA-UCUGUG-UG 45680 Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGC 198 ||||||| ||| |||||| | |||| || | Sbjct 45681 UGUGUGUGUGUGUGUGUGUGUGUUACUAGGAAC 45713 >> URS000195CFCE_9986 Oryctolagus cuniculus (rabbit) lncRNA (ENSOCUG00000033414.1) E-value: 2e+3 Identity: 68.06% Query coverage: 23.76% Gaps: 2.78% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCU 232 |||||||||| ||| |||||| | || | |||||||| | |+|||||| | ||| | | ||| | Sbjct 444 GCAGGUGUGUGUGUGUGUGUGUGUGUGUG--GACGUGCACAUUUGUACAAAUGAUGUACUGCUGGAUAUUUU 513 >> URS000199F48A_1608454 Sinocyclocheilus anshuiensis (blind barbel) lncRNA (ENSSANG00000021149.1) E-value: 2e+3 Identity: 55.68% Query coverage: 29.04% Gaps: 13.64% Alignment: Query 101 AGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||| | || | | | ||| |||| | || |||||| | || | |||||||| ||| |||||| | || Sbjct 279 UCACCCUGCAGGGUUUCAUGGACACUACAG------------GGACAUCUCCUUCAAAACCAAAGUGUGUGUGUGUGUGUGUGUGUGU 354 >> URS000199E12B_1608454 Sinocyclocheilus anshuiensis (blind barbel) lncRNA (ENSSANG00000021149.1) E-value: 2e+3 Identity: 55.68% Query coverage: 29.04% Gaps: 13.64% Alignment: Query 101 AGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||| | || | | | ||| |||| | || |||||| | || | |||||||| ||| |||||| | || Sbjct 389 UCACCCUGCAGGGUUUCAUGGACACUACAG------------GGACAUCUCCUUCAAAACCAAAGUGUGUGUGUGUGUGUGUGUGUGU 464 >> URS0000CE94F2_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.1e+3 Identity: 62.35% Query coverage: 27.06% Gaps: 3.53% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUUGGGCAUC--UCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 |||| | || | ||| || | || ||| |||| | || | |||||||| ||| |||||| | || ||| ||| Sbjct 2127 CACUCCAGCCUGGCGACAGAGUGAGAUUCCGUCUCAAAAAUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUGGGCAU 2211 >> URS00027FB5CC_10181 Heterocephalus glaber (naked mole-rat) lncRNA (ENSHGLG00000047100.1) E-value: 2.1e+3 Identity: 56.85% Query coverage: 46.20% Gaps: 10.27% Alignment: Query 141 UUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU-----UCUGAUUG 225 || | +|+|++|||| || |||||||| ||| |||||| | || + | ||| |||+ | ||| ||| | | | || || Sbjct 811 AUGAGUUCCCCCCAAAA----GAAGUGUGUGUGUGUGUGUGUGUGUGUGUCUACAUGUACACAC--AUACAUGUAUUCAUACUUUGCUUU 894 Query 226 UAAUUCUAGCCUUCCGUCCUGUGA-CAUUCUGUGAUGUAGUCGUUAUUCAGUGAUA 280 +||| || ++ || || || ||| || ||||| +| ||||||| || Sbjct 895 CAAUGUAAGUACCAUGUGCUUUGGUCAU---UGAAUUUAGUCUCUUUUCAGUGUUA 947 >> URS0002554FEB_61616 Pelobates cultripes (western spadefoot toad) non-coding RNA E-value: 2.1e+3 Identity: 50.83% Query coverage: 37.62% Gaps: 21.67% Alignment: Query 80 GCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAU---GCCCAGA---CUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACU 159 | | || ||| | | || | || | ||||| || | | | | ||||| | || ||| | Sbjct 50604 UUUCUUUAAAUAAUCUACAAGUGCCCCUCCCGAGAUCAGGCUCUGGAUCCGCCACUGCUGAGCGAGAGAG---------------- 50673 Query 160 UUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCA 193 |||||||| ||| |||||| | ||||| Sbjct 50674 ----UGUGUGUGUGUGUGUGUGUGUGUGUUAUUC 50703 >> URS000194F270_9823 Sus scrofa (pig) lncRNA (ENSSSCG00050055502.1) E-value: 2.1e+3 Identity: 62.82% Query coverage: 25.74% Gaps: 5.13% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUG 225 | |||||| | || || || ||| ||| ||||| | ||| ||| ||||| | | ||| | ||| ||| Sbjct 1878 GCAGUUAAAAAUGUGUGGGGUAUGUGUGUGCGUGUGUGUGUUUUCA----CACAUCCCAAACAAUACAACUCUAUUUG 1951 >> URS00026C7EE6_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 2.1e+3 Identity: 61.32% Query coverage: 34.98% Gaps: 6.60% Alignment: Query 25 ACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAG 111 | || ||| | ||| ||||| || | |||||||||| | ||| | | || | | | | |||||||||| || Sbjct 13494 AUGAUAUUGGGGGAAAAGAGUUUCAGA----GUAAAAUUACUAACAUUUCCAUCUUCUCCCUGCUUCC-UUCCAUAAGACUUUG--A 13573 Query 112 AGAUGCCCAGACUCUACUG 130 |||| | | || ||||| Sbjct 13574 AGAUCACUGGUCUUUACUG 13592 >> URS0000EC8F4D_5661 Leishmania donovani gene:LdHU3.28.3220(CDS-product:23-bisphosphoglyce rate-independent_phosphoglycerate_mutase-like) E-value: 2.1e+3 Identity: 58.00% Query coverage: 30.36% Gaps: 16.00% Alignment: Query 125 CUACUGCGGUGCUAGAUUGGGCAUCUCU--------UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 || ||| |||||| || ||||||| | ||| ||| |||| ||| |||||| | | | ||||||| ||| Sbjct 3120 CUGCUGUGGUGCUGCAU----CAUCUCUACUACGCUCAUCACU----CGUGAGUGUGUGUGUGUGUGUGAAUCAGUGCAUGCACAAUCG 3200 Query 206 GAUAAAUGAAC 216 || | | | Sbjct 3201 ACUAGACAAGC 3211 >> URS000283B92F_558553 Crassostrea angulata (Portuguese oyster) uncharacterized LOC128184726 E-value: 2.2e+3 Identity: 58.00% Query coverage: 31.35% Gaps: 5.00% Alignment: Query 155 AAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU-----GAACUUCUGAUUGUAAUUCUAGCCUU 238 || || || |||| ||| ||| | | | | ||| || ||| ||||| || | || ||| | || | | | || Sbjct 592 AAUAUUGCAGUCAUGUGAAUGGAUGCAUACGUGCUUCCAGUUGUCCAUCCGGAUUUAUUGGUAGUUUUUGUGAAUCAAAGUGCAUCUUU 680 Query 239 CCGUCCUGUGA 249 ||||||| || Sbjct 681 CCGUCCUAUGG 691 >> URS0001A1E42C_183150 Oryzias sinensis (Chinese medaka) lncRNA (ENSOSIG00000023411.1) E-value: 2.2e+3 Identity: 54.84% Query coverage: 28.05% Gaps: 20.43% Alignment: Query 63 UACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCC-AUAAGAC-------CUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAU 141 || | | | | | | ||||| | | | ||| | | | |||||| ||| | | |||||||| ||| | | Sbjct 1094 UAUU-----------AUUCCAGACAAAUACUCUACUAGAAGUCUGCAUCUCAUGGAGAGAUCACCACAAUGUACUGCGGCGCUGGUU 1169 Query 142 UGGGCA 147 || ||| Sbjct 1170 UGAGCA 1175 >> URS000235FCE5_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC000848) E-value: 2.2e+3 Identity: 51.92% Query coverage: 47.52% Gaps: 13.46% Alignment: Query 41 CGAGUUCCAUGG-GUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGC--------- 117 |||| |||| || | | | || |||| | |||||| | ||| | || | | ||| | | Sbjct 48226 GUAGUUGUAUGGAGUGGUGUAGUCACCAUCCAAG---UAGUGUAUAUAUACUCUACCUAU--GC--AAUGAGAAAAGGCAGUUCACU 48305 Query 118 --CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 ||| | | ||| | | | | | || | || ||||| || | ||||||| ||| |||| | Sbjct 48306 UGCCACCAUUUCCUGUGUUCAUUCUUCAGCCAACGCUGAAAACAGUGUGCUGUGUGUGUGUGUGUG--A 48372 >> URS0000B716E5_3981 Hevea brasiliensis miscellaneous RNA E-value: 2.2e+3 Identity: 58.97% Query coverage: 35.97% Gaps: 6.84% Alignment: Query 149 CUCUUAAAACUUUGAGGUGUGUGU-AUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC---GGAUAAAUGAACUUCUGAUUGUAAUUCUAGC 235 | ||||| || | ||| | | ||||| ||||| ||| ||||||||| | | |||| || || |||| | || || Sbjct 370 CCAUUAAAUCUGCCAUGUGAUUUUGUCGUAUGGGUGAGAGUUGAAUGAUGCACAUACAAUGUGGAAAUUAAUUUGGCAUUGGCAGUCAAGG 460 Query 236 CUUCC----GUCCUGUGACAUUCUGU 257 | ||| | ||| | | ||| | Sbjct 461 CCUCCAAAGGAUCUGAGCCGGUCUCU 486 >> URS00027A429A_74358 Podarcis lilfordi non-coding RNA E-value: 2.2e+3 Identity: 52.99% Query coverage: 36.96% Gaps: 11.11% Alignment: Query 97 CAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUU---GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUG 179 | ||| ||| |||| ||||| || | ||| | ||| | | || | | |||||||| |||| | Sbjct 10054 AACCAGAUGUUUCUGAGAAGCCCAACAGCU--------GGUAGUCAGAGGCUAAUCCCGUGUAAUCCUAAAGUGUGUGUCUGUAGG 10131 Query 180 UGUGAGGGUUAUCAGAU--GCACAUUCGGAU 208 || | | | |||| | | | || ||| Sbjct 10132 UGCUAUGCCUGUCAGGUUAGAAGAUGUGGAC 10162 >> URS0002735B6F_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 2.2e+3 Identity: 58.41% Query coverage: 36.30% Gaps: 14.16% Alignment: Query 150 UCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU---UAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAG 234 |||||| | | |||||||| ||| |||||| | || | | | |||| | | | | | | ||| | | Sbjct 2768 UCUUAAGAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUCUUACAUGCUCC------UCUCU------CAGCCUCUAACUGAAC 2843 Query 235 CCUUCCGUCCUGUGACAUUCUGUGA 259 ||||| || ||||||| ||| ||| Sbjct 2844 CCUUCAGU-CUGUGACCUUCACUGA 2867 >> URS0001A1EDFA_183150 Oryzias sinensis (Chinese medaka) lncRNA (ENSOSIG00000023411.1) E-value: 2.2e+3 Identity: 54.84% Query coverage: 28.05% Gaps: 20.43% Alignment: Query 63 UACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCC-AUAAGAC-------CUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUG 143 || | | | | | | ||||| | | | ||| | | | |||||| ||| | | |||||||| ||| | ||| Sbjct 909 UAUU-----------AUUCCAGACAAAUACUCUACUAGAAGUCUGCAUCUCAUGGAGAGAUCACCACAAUGUACUGCGGCGCUGGUUUG 986 Query 144 GGCA 147 ||| Sbjct 987 AGCA 990 >> URS00023A043F_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC000848) E-value: 2.2e+3 Identity: 51.92% Query coverage: 47.52% Gaps: 13.46% Alignment: Query 41 CGAGUUCCAUGG-GUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGC--------- 117 |||| |||| || | | | || |||| | |||||| | ||| | || | | ||| | | Sbjct 72275 GUAGUUGUAUGGAGUGGUGUAGUCACCAUCCAAG---UAGUGUAUAUAUACUCUACCUAU--GC--AAUGAGAAAAGGCAGUUCACU 72354 Query 118 --CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 ||| | | ||| | | | | | || | || ||||| || | ||||||| ||| |||| | Sbjct 72355 UGCCACCAUUUCCUGUGUUCAUUCUUCAGCCAACGCUGAAAACAGUGUGCUGUGUGUGUGUGUGUG--A 72421 >> URS000197B5D8_299321 Denticeps clupeoides (denticle herring) lncRNA (ENSDCDG00000028314.1) E-value: 2.3e+3 Identity: 51.18% Query coverage: 33.99% Gaps: 22.83% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU---CUUAAAACUUUG--- 162 ||| | | | | | ||||| || |||||| |||| | | | || || || | |||| | | ||| | | Sbjct 1589 UAUCUUUAGAUUUUUCAUAAAGCC-UUUAGAAAUGCACGUCC-C---CACGAUGUGGCAUCGUGCAUGUAGUCCCCAAAUUGCGGCU 1670 Query 163 --------AG----------GUGUGUGUAUGUAUGUGUGA 184 | |||||||| ||| ||||||| Sbjct 1671 ACACAAGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGA 1710 >> URS000198E20B_8175 Sparus aurata (gilthead seabream) lncRNA (ENSSAUG00010012293.1) E-value: 2.3e+3 Identity: 53.98% Query coverage: 36.96% Gaps: 7.96% Alignment: Query 138 AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGC-ACAUUCGGAUAAAUGAACUUCUGAUUG 225 | |||| ||| | ||| | ||||||||||| ||| | | || | ||||| | |||| | ||| | | Sbjct 2027 AAAUUGAGCAACGCUUCUCAACAAGAGGUGUGUGUGUGUGUAUUUGGAAGCCGUCAGACAGAAUGCCUGGAUGACCGAAACU--G---- 2109 Query 226 UAAUUCUAGCCUUCCGUCCUGUGA 249 | | | || ||||||| | Sbjct 2110 --AACAUGACUUUUUGUCCUGUCA 2131 >> URS000196CDF6_299321 Denticeps clupeoides (denticle herring) lncRNA (ENSDCDG00000028314.1) E-value: 2.3e+3 Identity: 51.18% Query coverage: 33.99% Gaps: 22.83% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU---CUUAAAACUUUG--- 162 ||| | | | | | ||||| || |||||| |||| | | | || || || | |||| | | ||| | | Sbjct 1703 UAUCUUUAGAUUUUUCAUAAAGCC-UUUAGAAAUGCACGUCC-C---CACGAUGUGGCAUCGUGCAUGUAGUCCCCAAAUUGCGGCU 1784 Query 163 --------AG----------GUGUGUGUAUGUAUGUGUGA 184 | |||||||| ||| ||||||| Sbjct 1785 ACACAAGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGA 1824 >> URS00019737D5_299321 Denticeps clupeoides (denticle herring) lncRNA (ENSDCDG00000028314.1) E-value: 2.3e+3 Identity: 51.18% Query coverage: 33.99% Gaps: 22.83% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU---CUUAAAACUUUG--- 162 ||| | | | | | ||||| || |||||| |||| | | | || || || | |||| | | ||| | | Sbjct 1703 UAUCUUUAGAUUUUUCAUAAAGCC-UUUAGAAAUGCACGUCC-C---CACGAUGUGGCAUCGUGCAUGUAGUCCCCAAAUUGCGGCU 1784 Query 163 --------AG----------GUGUGUGUAUGUAUGUGUGA 184 | |||||||| ||| ||||||| Sbjct 1785 ACACAAGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGA 1824 >> URS000194C592_299321 Denticeps clupeoides (denticle herring) lncRNA (ENSDCDG00000028314.1) E-value: 2.3e+3 Identity: 51.18% Query coverage: 33.99% Gaps: 22.83% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU---CUUAAAACUUUG--- 162 ||| | | | | | ||||| || |||||| |||| | | | || || || | |||| | | ||| | | Sbjct 1817 UAUCUUUAGAUUUUUCAUAAAGCC-UUUAGAAAUGCACGUCC-C---CACGAUGUGGCAUCGUGCAUGUAGUCCCCAAAUUGCGGCU 1898 Query 163 --------AG----------GUGUGUGUAUGUAUGUGUGA 184 | |||||||| ||| ||||||| Sbjct 1899 ACACAAGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGA 1938 >> URS000197123B_9823 Sus scrofa (pig) lncRNA (ENSSSCG00055001137.1) E-value: 2.3e+3 Identity: 54.42% Query coverage: 41.91% Gaps: 14.29% Alignment: Query 61 AUUACUAUCCUUUAAUUUU----------G----CUAUAUACAUACUAUCCAUAAGACC--UUUUAGAGAUGCCCAGACUCUACUGCGGUG 135 +|| |||| |||| |||| | +|+| ||||| || | +||||| | + | || + |||||| | || || | Sbjct 656 CCUAUUAUCUUUUAUUUUUUGAGGUGUUUGUAGAACACAGACAUAAAAUUC-CAAGACUAAUACAACAGCCACCCAGAAUUUAUGGCACUU 745 Query 136 CUAGAUUGGGCAUCU----CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 | || ||||| | |+| ||||| | |||||| ||| |||||| | | Sbjct 746 AAUGUUUUGGCAUAUUUGUUUCAGGCCUUUGUGAAGUGUGUGUGUGUGUGUGUGUG 801 >> URS00025EF315_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000057413.1) E-value: 2.3e+3 Identity: 51.87% Query coverage: 55.78% Gaps: 16.04% Alignment: Query 34 AUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCU---UUUAGAGAUGCCC 119 | ||||| || | ||| | ||| || ||| ||| | | ||| | ||| ||||| || | || | Sbjct 1445 AGGAAAAUGAAUGCCACCAGCUGCCAAGUUAUUAUUGCUGAGCAG--GAAUACAAAUAG-------GAGACCCCUAUUCUGCUAUCUGC 1524 Query 120 AGACUCUACUGCG-GUGCUAGAUUGGGCAUCUCUUAAAACUUUGA-----------G---GUGUGUGUAUGUAUGUGUGAGGGUUAUCA 193 ||| | ||| | ||| | | || | |||||| ||||| | || ||| ||| |||||| | || || Sbjct 1525 UGACACCACUCCCUGUGAAAA--U-AUUAUUUGUUAAAAUUUUGAUUCACCUUUUAGAAUUAGUCUGUGUGUGUGUGUGUGUGUGUGCA 1610 Query 194 GAUGCACAU 202 |||||| Sbjct 1611 CAUGCACCC 1619 >> URS0001952121_299321 Denticeps clupeoides (denticle herring) lncRNA (ENSDCDG00000028314.1) E-value: 2.3e+3 Identity: 51.18% Query coverage: 33.99% Gaps: 22.83% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU---CUUAAAACUUUG--- 162 ||| | | | | | ||||| || |||||| |||| | | | || || || | |||| | | ||| | | Sbjct 1589 UAUCUUUAGAUUUUUCAUAAAGCC-UUUAGAAAUGCACGUCC-C---CACGAUGUGGCAUCGUGCAUGUAGUCCCCAAAUUGCGGCU 1670 Query 163 --------AG----------GUGUGUGUAUGUAUGUGUGA 184 | |||||||| ||| ||||||| Sbjct 1671 ACACAAGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGA 1710 >> URS000197306C_299321 Denticeps clupeoides (denticle herring) lncRNA (ENSDCDG00000028314.1) E-value: 2.3e+3 Identity: 51.18% Query coverage: 33.99% Gaps: 22.83% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU---CUUAAAACUUUG--- 162 ||| | | | | | ||||| || |||||| |||| | | | || || || | |||| | | ||| | | Sbjct 1475 UAUCUUUAGAUUUUUCAUAAAGCC-UUUAGAAAUGCACGUCC-C---CACGAUGUGGCAUCGUGCAUGUAGUCCCCAAAUUGCGGCU 1556 Query 163 --------AG----------GUGUGUGUAUGUAUGUGUGA 184 | |||||||| ||| ||||||| Sbjct 1557 ACACAAGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGA 1596 >> URS00023501B0_29760 Vitis vinifera (wine grape) long non-coding RNA (VVIN_LNC000025) E-value: 2.3e+3 Identity: 61.80% Query coverage: 27.72% Gaps: 7.87% Alignment: Query 146 CAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGA-----ACUUCUGAUUGUAAU 229 || | ||| | | || | |||||||| ||| |||||| | || | ||||||+| | ||| || || |+ |||| ||| Sbjct 452 CAACGCUUGAUAAUU--AUGUGUGUGUGUGUGUGUGUGUGUGUGCACGCGUGCACACUUGCUUAACAGAGAUAGACAACCUAUUGAAAU 538 >> URS0001952121_299321 Denticeps clupeoides (denticle herring) lncRNA (ENSDCDG00000028314.1) E-value: 2.3e+3 Identity: 51.18% Query coverage: 33.99% Gaps: 22.83% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU---CUUAAAACUUUG--- 162 ||| | | | | | ||||| || |||||| |||| | | | || || || | |||| | | ||| | | Sbjct 1589 UAUCUUUAGAUUUUUCAUAAAGCC-UUUAGAAAUGCACGUCC-C---CACGAUGUGGCAUCGUGCAUGUAGUCCCCAAAUUGCGGCU 1670 Query 163 --------AG----------GUGUGUGUAUGUAUGUGUGA 184 | |||||||| ||| ||||||| Sbjct 1671 ACACAAGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGA 1710 >> URS000195CD17_299321 Denticeps clupeoides (denticle herring) lncRNA (ENSDCDG00000028314.1) E-value: 2.3e+3 Identity: 51.18% Query coverage: 33.99% Gaps: 22.83% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU---CUUAAAACUUUG--- 162 ||| | | | | | ||||| || |||||| |||| | | | || || || | |||| | | ||| | | Sbjct 1703 UAUCUUUAGAUUUUUCAUAAAGCC-UUUAGAAAUGCACGUCC-C---CACGAUGUGGCAUCGUGCAUGUAGUCCCCAAAUUGCGGCU 1784 Query 163 --------AG----------GUGUGUGUAUGUAUGUGUGA 184 | |||||||| ||| ||||||| Sbjct 1785 ACACAAGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGA 1824 >> URS00019737D5_299321 Denticeps clupeoides (denticle herring) lncRNA (ENSDCDG00000028314.1) E-value: 2.3e+3 Identity: 51.18% Query coverage: 33.99% Gaps: 22.83% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU---CUUAAAACUUUG--- 162 ||| | | | | | ||||| || |||||| |||| | | | || || || | |||| | | ||| | | Sbjct 1703 UAUCUUUAGAUUUUUCAUAAAGCC-UUUAGAAAUGCACGUCC-C---CACGAUGUGGCAUCGUGCAUGUAGUCCCCAAAUUGCGGCU 1784 Query 163 --------AG----------GUGUGUGUAUGUAUGUGUGA 184 | |||||||| ||| ||||||| Sbjct 1785 ACACAAGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGA 1824 >> URS00023A1C06_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC008971) E-value: 2.3e+3 Identity: 61.86% Query coverage: 31.35% Gaps: 9.28% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAU--UCUAGCCUUCCGUCCUGUG 248 || |||||| ||| |||||| | |||||| ||| | | |||| | +||| || || ||+|||| | |||| Sbjct 63585 GGGGUGUGUGUGUGUGUGUGUGUGUUAUCCGAUAGAAGA-AAAAAAAAUCCAAACCUGUUUCAAAAUAUCCAGCC------CAUGUG 63664 Query 249 ACAUUCUGUG 258 || |||||| Sbjct 63665 UCAAUCUGUG 63674 >> URS0002396493_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC008970) E-value: 2.3e+3 Identity: 61.86% Query coverage: 31.35% Gaps: 9.28% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAU--UCUAGCCUUCCGUCCUGUG 248 || |||||| ||| |||||| | |||||| ||| | | |||| | +||| || || ||+|||| | |||| Sbjct 64704 GGGGUGUGUGUGUGUGUGUGUGUGUUAUCCGAUAGAAGA-AAAAAAAAUCCAAACCUGUUUCAAAAUAUCCAGCC------CAUGUG 64783 Query 249 ACAUUCUGUG 258 || |||||| Sbjct 64784 UCAAUCUGUG 64793 >> URS000238163A_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC008971) E-value: 2.3e+3 Identity: 61.86% Query coverage: 31.35% Gaps: 9.28% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAU--UCUAGCCUUCCGUCCUGUG 248 || |||||| ||| |||||| | |||||| ||| | | |||| | +||| || || ||+|||| | |||| Sbjct 45799 GGGGUGUGUGUGUGUGUGUGUGUGUUAUCCGAUAGAAGA-AAAAAAAAUCCAAACCUGUUUCAAAAUAUCCAGCC------CAUGUG 45878 Query 249 ACAUUCUGUG 258 || |||||| Sbjct 45879 UCAAUCUGUG 45888 >> URS00023B1516_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC008972) E-value: 2.3e+3 Identity: 61.86% Query coverage: 31.35% Gaps: 9.28% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAU--UCUAGCCUUCCGUCCUGUG 248 || |||||| ||| |||||| | |||||| ||| | | |||| | +||| || || ||+|||| | |||| Sbjct 63353 GGGGUGUGUGUGUGUGUGUGUGUGUUAUCCGAUAGAAGA-AAAAAAAAUCCAAACCUGUUUCAAAAUAUCCAGCC------CAUGUG 63432 Query 249 ACAUUCUGUG 258 || |||||| Sbjct 63433 UCAAUCUGUG 63442 >> URS00023B3E0A_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC008968) E-value: 2.3e+3 Identity: 61.86% Query coverage: 31.35% Gaps: 9.28% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAU--UCUAGCCUUCCGUCCUGUG 248 || |||||| ||| |||||| | |||||| ||| | | |||| | +||| || || ||+|||| | |||| Sbjct 61032 GGGGUGUGUGUGUGUGUGUGUGUGUUAUCCGAUAGAAGA-AAAAAAAAUCCAAACCUGUUUCAAAAUAUCCAGCC------CAUGUG 61111 Query 249 ACAUUCUGUG 258 || |||||| Sbjct 61112 UCAAUCUGUG 61121 >> URS00021EFB94_9541 Macaca fascicularis (Crab-eating macaque) lncRNA (ENSMFAG00000058878.1) E-value: 2.4e+3 Identity: 47.73% Query coverage: 40.59% Gaps: 20.45% Alignment: Query 95 UCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGC---------AUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 ||| |||| || || | || || ||||| | | |||| | | |||||||| ||| Sbjct 708 ACCAGAAGAUACUUAAGUGGAACCAAGU------------------CUGGGCUGGCAACAAACCACUUACAUAGUGUGUGUGUGUGUGUGU 780 Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU 217 |||||| | || ||||||| |||| ||| Sbjct 781 GUGUGUGUGUGUGUGUGUGCGCACAUUAAAAUAACACAACA 821 >> URS000194D025_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035035980.1) E-value: 2.4e+3 Identity: 54.79% Query coverage: 41.58% Gaps: 14.38% Alignment: Query 62 UUACUAUCCUUUAAUUUU----------G----CUAUAUACAUACUAUCCAUAAGACC--UUUUAGAGAUGCCCAGACUCUACUGCGGUGC 136 +|| |||| |||| |||| | +|+| ||||| || | +||||| | + | || + |||||| | || || | Sbjct 657 CUAUUAUCUUUUAUUUUUUGAGGUGUUUGUAGAACACAGACAUAAAAUUC-CAAGACUAAUACAACAGCCACCCAGAAUUUAUGGCACUUA 746 Query 137 UAGAUUGGGCAUCU----CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 | || ||||| | |+| ||||| | |||||| ||| |||||| | | Sbjct 747 AUGUUUUGGCAUAUUUGUUUCAGGCCUUUGUGAAGUGUGUGUGUGUGUGUGUGUG 801 >> URS0002427B06_4081 Solanum lycopersicum (tomato) long non-coding RNA (SLYC_LNC000672) E-value: 2.4e+3 Identity: 59.49% Query coverage: 26.07% Gaps: 0.00% Alignment: Query 119 CAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUG 197 | | ||| ||| | || || ||||| | ||| | | |||||| |||| | | | | | |||| | | | | Sbjct 97071 UAAAUUCUCCUGUGCUGAUAUUUUGGGGGUUUCUGACCCCAUUGAGGGAUGUGCAAGAAAGACCGUGGGUCAGCCUACG 97149 >> URS000194E2D1_9823 Sus scrofa (pig) lncRNA (ENSSSCG00030048566.1) E-value: 2.4e+3 Identity: 71.43% Query coverage: 16.17% Gaps: 0.00% Alignment: Query 25 ACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUU 73 || || || | |||||| || |||||| |||||| | ||| | ||| Sbjct 649 ACCAUUUUAAGGAAAACAAGCCCCAUGGAUUGCAAGACUACAGUGCUUC 697 >> URS00027C6F68_74358 Podarcis lilfordi non-coding RNA E-value: 2.4e+3 Identity: 64.79% Query coverage: 20.79% Gaps: 11.27% Alignment: Query 151 CUUAAAAC-UUUGAGGUGUGUGU--AUGUAUGUGUGAGGGUUAUCAGA-----UGCACAUUCGGAUAAAUG 213 | | ||| |||| |||||||| ||| |||||| | |||||||| | ||||| | ||| | Sbjct 8962 CCCACAACUUUUGCAGUGUGUGUGUGUGUGUGUGUGUGCCUUAUCAGAUUGGAUCCACAUGCUCAUACUAG 9032 >> URS0000D386D7_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.4e+3 Identity: 63.16% Query coverage: 25.08% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA 195 ||||| +| || || | | ||||||| ++|| |||||| | ||||| ||| |||||| | | | ||| Sbjct 1425 AGACUACAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUAGCUACUAAGA 1500 >> URS00019588E0_9823 Sus scrofa (pig) lncRNA (ENSSSCG00065036589.1) E-value: 2.4e+3 Identity: 54.42% Query coverage: 41.91% Gaps: 14.29% Alignment: Query 61 AUUACUAUCCUUUAAUUUU----------G----CUAUAUACAUACUAUCCAUAAGACC--UUUUAGAGAUGCCCAGACUCUACUGCGGUG 135 +|| |||| |||| |||| | +|+| ||||| || | +||||| | + | || + |||||| | || || | Sbjct 656 CCUAUUAUCUUUUAUUUUUUGAGGUGUUUGUAGAACACAGACAUAAAAUUC-CAAGACUAAUACAACAGCCACCCAGAAUUUAUGGCACUU 745 Query 136 CUAGAUUGGGCAUCU----CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 | || ||||| | |+| ||||| | |||||| ||| |||||| | | Sbjct 746 AAUGUUUUGGCAUAUUUGUUUCAGGCCUUUGUGAAGUGUGUGUGUGUGUGUGUGUG 801 >> URS0000CE73C7_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.4e+3 Identity: 63.16% Query coverage: 25.08% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA 195 ||||| +| || || | | ||||||| ++|| |||||| | ||||| ||| |||||| | | | ||| Sbjct 2252 AGACUACAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUAGCUACUAAGA 2327 >> URS0000CDDC58_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.4e+3 Identity: 63.16% Query coverage: 25.08% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA 195 ||||| +| || || | | ||||||| ++|| |||||| | ||||| ||| |||||| | | | ||| Sbjct 2034 AGACUACAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUAGCUACUAAGA 2109 >> URS00027CC777_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 2.4e+3 Identity: 59.15% Query coverage: 18.48% Gaps: 22.54% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGU----------UAU-----CAGAUGCACAUUCGGAUAAAUGAACUUC 219 |||||||| ||| ||||||||||| | | |||| || +||| ||| |||||| Sbjct 29593 UGUGUGUGUGUGUGUGUGUGAGGGUAUAUAUAUAUA-UAUAUAUAUAUGCGCAACCGGUAAAAAGAACUUU 29662 >> URS0000D2A585_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.4e+3 Identity: 63.16% Query coverage: 25.08% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA 195 ||||| +| || || | | ||||||| ++|| |||||| | ||||| ||| |||||| | | | ||| Sbjct 1652 AGACUACAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUAGCUACUAAGA 1727 >> URS0000CE617D_9598 Pan troglodytes (chimpanzee) antisense RNA E-value: 2.4e+3 Identity: 63.16% Query coverage: 25.08% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA 195 ||||| +| || || | | ||||||| ++|| |||||| | ||||| ||| |||||| | | | ||| Sbjct 1565 AGACUACAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUAGCUACUAAGA 1640 >> URS000194CB30_9823 Sus scrofa (pig) lncRNA (ENSSSCG00045008829.1) E-value: 2.4e+3 Identity: 54.42% Query coverage: 41.91% Gaps: 14.29% Alignment: Query 61 AUUACUAUCCUUUAAUUUU----------G----CUAUAUACAUACUAUCCAUAAGACC--UUUUAGAGAUGCCCAGACUCUACUGCGGUG 135 +|| |||| |||| |||| | +|+| ||||| || | +||||| | + | || + |||||| | || || | Sbjct 656 CCUAUUAUCUUUUAUUUUUUGAGGUGUUUGUAGAACACAGACAUAAAAUUC-CAAGACUAAUACAACAGCCACCCAGAAUUUAUGGCACUU 745 Query 136 CUAGAUUGGGCAUCU----CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 | || ||||| | |+| ||||| | |||||| ||| |||||| | | Sbjct 746 AAUGUUUUGGCAUAUUUGUUUCAGGCCUUUGUGAAGUGUGUGUGUGUGUGUGUGUG 801 >> URS00023E7C21_4039 Daucus carota (carrot) long non-coding RNA (DCAR_LNC003725) E-value: 2.5e+3 Identity: 56.14% Query coverage: 36.96% Gaps: 8.77% Alignment: Query 116 GCCCAGACUCUACUGCGGUGCUAGAUUGGGCA--UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||| || |||| | | || || || || |||| |||||| | |||||| | | || ||| ||| || |||| Sbjct 426 GCCUAGGCUCUGAUACCAUGUUAAG-UGACCAAUUCUCCUAAAACCUCAAGGUGUUAGG-------AGGAGGGCUUACCAGGAUCAUAUUC 508 Query 205 GGAUAAAUGAACUUCUGAUUGUA 227 | | || | | | |||| | Sbjct 509 UAACAGAUUAGCAUUUGAUCGAG 531 >> URS000274807C_74358 Podarcis lilfordi non-coding RNA E-value: 2.5e+3 Identity: 58.51% Query coverage: 29.70% Gaps: 4.26% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAA----UUCUAGCCUUCCGUCCUGU 247 |||||||| ||| |||||| | || | |||| | |||||| || ||| | | | || ||||| ||| Sbjct 4649 UGUGUGUGUGUGUGUGUGUGUGUGUGUAGAACUGCAUGCUGUGAUAAAGUAAACUCUCUUCCUGAGUCCCUCCAGCCUCAGCCUCUGG 4736 Query 248 GACAUU 253 ||| || Sbjct 4737 GACUUU 4742 >> URS00026187C7_58331 Quercus suber (cork oak) sRNA gene-CFP56_48044 E-value: 2.5e+3 Identity: 58.44% Query coverage: 24.09% Gaps: 5.19% Alignment: Query 152 UUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || ||||| | | | || |||| |||| || | || |||||||| ||| |||| ||| | | Sbjct 11006 UUGGUACUUUCUGUAGUGAGAGUUUAUGCAUGUCCAUGGAUGUGCACAUGCACAUAUGGACAAAUUAACAUUCACGU 11082 >> URS00024231C5_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC005863) E-value: 2.5e+3 Identity: 62.67% Query coverage: 21.45% Gaps: 13.33% Alignment: Query 173 AUGUAUGUGUGAGGGUUAUCAGAUG---CACAUUC-------GGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCU 237 |||||| | ||| | || || | || ||| |||||| || |||| |||||| || |||||| Sbjct 127165 UUGUAUGAGGGAGAGGCAUAAGCUAACAUACUUUCUCUUCUUGGAUAAUUGCACUUAUGAUUGGAACUCUAGCAA 127239 >> URS00019860F0_441894 Struthio camelus australis (African ostrich) lncRNA (ENSSCUG00000012083.1) E-value: 2.5e+3 Identity: 58.10% Query coverage: 33.00% Gaps: 9.52% Alignment: Query 179 GUGUGAGGG---UUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGA--CAUUCUGUGAU 260 ||| | | | | ||| || ||||| | || ||| | |||| | || |||| | ||||| | | || ||| Sbjct 1703 GUGAGUAGCUUUUAACCAGCUGGACAUUUCAAAAAGUGAGCAUCUGUUA-----CCUUGCCUAAUCUGUUGUGACCCCUGCUUUGAA 1784 Query 261 GUAGUCGUUAUUCAGUGA 278 || | |||| |||||| Sbjct 1785 GUUGCCGUUGCUCAGUGG 1802 >> URS00008BAA37_9606 Homo sapiens (human) non-protein coding lnc-RASGRF1-6:1 E-value: 2.6e+3 Identity: 56.86% Query coverage: 31.02% Gaps: 11.76% Alignment: Query 145 GCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC-------GGAUAAAUGAACUUCUG-AUUG 225 ||||||||| || ||||||||||||||||||| || | | |||| | ||| | |||| || | Sbjct 3264 GCAUCUCUUUGG----AGAUGUGUGUGUAUGUAUGUGUGUAAGUGAAUCAACUCACACUGUUCCAUGAAGCAAAAGGACUUUUGCAACC 3348 Query 226 UAAUUCUAGCCUU 238 || | | || || Sbjct 3349 UAUUCCAAGUCUG 3361 >> URS00019736FC_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035068828.1) E-value: 2.6e+3 Identity: 71.43% Query coverage: 16.17% Gaps: 0.00% Alignment: Query 25 ACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUU 73 || || || | |||||| || |||||| |||||| | ||| | ||| Sbjct 174 ACCAUUUUAAGGAAAACAAGCCCCAUGGAUUGCAAGACUACAGUGCUUC 222 >> URS00019752B6_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025001732.1) E-value: 2.6e+3 Identity: 71.43% Query coverage: 16.17% Gaps: 0.00% Alignment: Query 25 ACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUU 73 || || || | |||||| || |||||| |||||| | ||| | ||| Sbjct 174 ACCAUUUUAAGGAAAACAAGCCCCAUGGAUUGCAAGACUACAGUGCUUC 222 >> URS00027EE8DF_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015038859.1) E-value: 2.6e+3 Identity: 62.96% Query coverage: 25.08% Gaps: 6.17% Alignment: Query 108 UUAGAGAUGCCCAG--ACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG---GUGUGUGUAUGUAUGUGUG 183 | |||| | | ||||| || ||| || || || || | | | |||| | | |||||||| ||| |||||| Sbjct 447 AGGGUGAUGUCUAAGCACUCUGAUGAGGUACUGGACUGAGCUCCAUUCUAUACUUCGUGUCCGUGUGUGUGUGUGUGUGUG 527 >> URS0002812847_13191 Pectinophora gossypiella (Pink bollworm) uncharacterized LOC126381614 E-value: 2.6e+3 Identity: 55.45% Query coverage: 33.00% Gaps: 11.88% Alignment: Query 114 AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA-UGCACAU 202 | ||| ||||| | | ||| | ||| || ||||| |||||||||||| | ||| | | ||| | | || Sbjct 571 ACCCCCCGACUCAAAAACA--------ACGGG---GUGUUAUAAGUUUGAAGUGUGUGUAUGUGUCUGUCUGUGGCAUCGUAGCUCCCAA 649 Query 203 UCGGAUAAAUG 213 ||||| | Sbjct 650 ACGGAUGAUCC 660 >> URS000194CA70_9823 Sus scrofa (pig) lncRNA (ENSSSCG00030048566.1) E-value: 2.6e+3 Identity: 71.43% Query coverage: 16.17% Gaps: 0.00% Alignment: Query 25 ACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUU 73 || || || | |||||| || |||||| |||||| | ||| | ||| Sbjct 173 ACCAUUUUAAGGAAAACAAGCCCCAUGGAUUGCAAGACUACAGUGCUUC 221 >> URS00027F38B8_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015038859.1) E-value: 2.6e+3 Identity: 62.96% Query coverage: 25.08% Gaps: 6.17% Alignment: Query 108 UUAGAGAUGCCCAG--ACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG---GUGUGUGUAUGUAUGUGUG 183 | |||| | | ||||| || ||| || || || || | | | |||| | | |||||||| ||| |||||| Sbjct 1072 AGGGUGAUGUCUAAGCACUCUGAUGAGGUACUGGACUGAGCUCCAUUCUAUACUUCGUGUCCGUGUGUGUGUGUGUGUGUG 1152 >> URS0001A05BE6_9995 Marmota monax (woodchuck) non-coding RNA E-value: 2.7e+3 Identity: 55.73% Query coverage: 43.23% Gaps: 12.21% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCA 147 | ||||||| ||||| ||| | |||||||| | | || ||| | | | ||| | || | | ||||| | || Sbjct 2699 ACAUUACUACCCUUUGAUUGAGAUAUAUACA-----------AUAUCUACUAGGAAGGACAGGACCCAGGUGAAGAGUGAGAUUAGCCA 2776 Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU 189 || | | |||||| | |||| || ||| || Sbjct 2777 C---AUAUAUGUCUGAGGUUAUCG--GGUAUUUGAAAGGAUU 2813 >> URS0000B7B654_3981 Hevea brasiliensis miscellaneous RNA E-value: 2.7e+3 Identity: 67.16% Query coverage: 21.12% Gaps: 7.46% Alignment: Query 110 AGAGAUGCCCAGACUCU---ACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUA 173 | |||||| | |||| | |||| | |+||||||||||||| | ||| ||| | || + ||| Sbjct 153 AUAGAUGCGCUGACUGUGGUGCUGCUGAACCAGAUUGGGCAUCUUU-AAAUCUU-GGUGUUCUUGUU 217 >> URS0000BD376E_10089 Mus caroli (Ryukyu mouse) RIKEN cDNA C330018A13 gene (MGP_CAROLIEiJ_G0003744.1) E-value: 2.7e+3 Identity: 60.00% Query coverage: 34.32% Gaps: 10.48% Alignment: Query 149 CUCUUAAAACUUUGAGGU-GUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGC 235 | | ||||| ||| | || ||||| ||| |||||| | |||| || ||| || | | || | | | |||||||| Sbjct 918 CCCCUAAAAUUUUCAUGUCAUGUGUGUGUGUGUGUGUGUGUUA-----UGUACAAUC-----UAGGCCCUACCUAGAGAAAUUCUAGU 995 Query 236 CUUCCGUCCUGUGACAU 252 || | ||| ||| Sbjct 996 AGUCUGGCCUUCAACAC 1012 >> URS00027E6F94_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015029498.1) E-value: 2.7e+3 Identity: 59.09% Query coverage: 35.31% Gaps: 2.73% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUU-CUAGCCUUCCGUCC--UGUGAC 250 ||||||| || || || | || | |||| | ||||| ||||| || ||| || || | || | ||| ||| Sbjct 2799 UGUGUGUGUGAGUGCAUGUGAACACACAAACACACAGUACCAUAAACAAACUUUUGGCUGUUAUAGCUGACAUUUCCUCCAUAGUGCU 2886 Query 251 AUUCUGUGAUGUAGUCGUUAUU 272 | ||| ||| | | ||||| Sbjct 2887 CUCCUGAGAUAUGUGCAUUAUU 2908 >> URS00026222A3_210409 Portunus trituberculatus (Swimming crab) uncharacterized LOC123518408 E-value: 2.7e+3 Identity: 62.22% Query coverage: 29.37% Gaps: 3.33% Alignment: Query 101 AGACCUUUUAGAGAUGCCCAGACUC-UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||| | ||| ||| ||||| ||| | ||| ||| | || | || ||| |||||||||| ||| |||||| | || Sbjct 604 AGAUUGUACAGACAUGAACAGACAUGCACUUC-CUGC-CGAUGGAAUUUCAGUCAACACUGCAAGGUGUGUGUGUGUGUGUGUGUGUGU 690 Query 189 U 189 Sbjct 691 G 691 >> URS00025F77FB_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000059400.1) E-value: 2.7e+3 Identity: 58.56% Query coverage: 36.30% Gaps: 15.32% Alignment: Query 85 AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-GUGUGUGU 172 |||||| | | ||||||| ||| | |||| ||| | | ||| | | || | || | || | |||||||| Sbjct 1374 UUACAUAACAGACCUAAGACCAUUUGGG-----------UCUA-----GUGGUGGGUUGAGUAACUAUGAAUUCACUGUGUGUGUGUGU 1446 Query 173 AUGUAUGUGUGAGGGUUAUCAG 194 ||| |||||| | || | || Sbjct 1447 GUGUGUGUGUGUGUGUCACCAU 1468 >> URS0000AA2C0D_9669 Mustela putorius furo (Domestic ferret) lncRNA (ENSMPUG00000029989.1) E-value: 2.7e+3 Identity: 51.97% Query coverage: 41.91% Gaps: 18.11% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGG 145 |||||++| | || || | ||+|||||| ||||| |+| || +|| | ||| |+||| Sbjct 2407 CAAAACCAUU--UUGUUGAUAUGGCCAUAUACUGGCUAUCUACAGGAGAGCUUCUAAGUGC---------------------CACUGGA 2472 Query 146 CAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUG 183 ||| | | || | || |||||||| ||| |||||| Sbjct 2473 CAUUUGUGAACAUUUGUGUGUGUGUGUGUGUGUGUGUG 2510 >> URS00025E5B35_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000102596.1) E-value: 2.8e+3 Identity: 56.99% Query coverage: 30.69% Gaps: 1.08% Alignment: Query 108 UUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAU 196 |||| | ||||| ||| || | || | | || | |||| | |||||||| ||| |||||| || ||| Sbjct 1298 CCCGAGA-GACCAGAUCUGUCUGAGGCAAUCCAUGGAAGACAAGUUCAGACUUAGGUGUGUGUGUGUGUGUGUGUGUUUGUCAUCCAGG 1385 Query 197 GCAC 200 ||| Sbjct 1386 UCAC 1389 >> URS00027B093A_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 2.8e+3 Identity: 62.03% Query coverage: 25.08% Gaps: 3.80% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUG---CACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCG 241 ||||||| ||| |||||| | || || | || | | | || |||| || ||| | || | ||| | || | Sbjct 12438 UGUGUGUGUGUGUGUGUGUGUGUCCUCUGCUGUCAAAUACCCUGACAAAUAAAGAUCUCAAAGUCACUCUUGAAGUCUG 12516 >> URS0000E8A47A_8823 Apteryx haastii (Great spotted kiwi) lncRNA (ENSAHAG00000002531.1) E-value: 2.8e+3 Identity: 67.09% Query coverage: 25.74% Gaps: 5.06% Alignment: Query 174 UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUG-UAAUUCUAGCCUUCCGUCCUGUGACA 251 || | | |||| | | ||| ||||||||| || ||||| |||| || | |||| | | ||||| | ||| | | Sbjct 27 UGAAGGCGUGAUCGAUCCCAGCUGCACAUUCAAAU--AUGAAGUUCUUAUGGAUAAUCCCAUUCUUCC-UGCUGCAAGA 102 >> URS00021F13EF_28377 Anolis carolinensis (green anole) lncRNA (ENSACAG00000040696.1) E-value: 2.8e+3 Identity: 66.67% Query coverage: 17.82% Gaps: 0.00% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 || ||| |||||||||| ||| |||||| | || || ||||| | | Sbjct 369 AAUGCUUACAGGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUACACAUACACA 422 >> URS00025F3550_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000102596.1) E-value: 2.8e+3 Identity: 56.99% Query coverage: 30.69% Gaps: 1.08% Alignment: Query 108 UUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAU 196 |||| | ||||| ||| || | || | | || | |||| | |||||||| ||| |||||| || ||| Sbjct 1706 CCCGAGA-GACCAGAUCUGUCUGAGGCAAUCCAUGGAAGACAAGUUCAGACUUAGGUGUGUGUGUGUGUGUGUGUGUUUGUCAUCCAGG 1793 Query 197 GCAC 200 ||| Sbjct 1794 UCAC 1797 >> URS0002739240_74358 Podarcis lilfordi non-coding RNA E-value: 2.9e+3 Identity: 60.19% Query coverage: 33.00% Gaps: 2.91% Alignment: Query 128 CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG---GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 ||| ||| ||||| | | | |||||| | |||||||| ||| |||||| | || ||| | || | || || || Sbjct 5772 AUGCACUGCAAGAUUUUGUUGCAUGCACCACUUUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUACAGUGGUACCUCGGGUUACAU 5859 Query 213 GAACUUCUGAUUGUA 227 |||| | || | Sbjct 5860 ACGCUUCAGGUUACA 5874 >> URS000199FF42_8128 Oreochromis niloticus (Nile tilapia) lncRNA (ENSONIG00000040949.1) E-value: 2.9e+3 Identity: 53.85% Query coverage: 40.92% Gaps: 6.15% Alignment: Query 90 UACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUG------CUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGU 172 ||| || ||||| | | ||| ||| |||| | | | || || | || | | | | | || | ||||| Sbjct 1871 AACUGACCCAAAGACAUCAGACAGAGGCCGAGACCCCCCAACCCUGAGGGCAUUAAAGUGUGUGCGUAUAAUAGAGGGGAUGCAUGUGU 1959 Query 173 AUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 |||||||||| | || || | ||| ||| ||| Sbjct 1960 GUGUAUGUGUGUGUGUC--CAUCCCCGUCUUCUCAUAGAUG 1998 >> URS0000ED1F95_5661 Leishmania donovani gene:LdHU3.31.4940(CDS-product:emp24/gp25L/p24_fa mily/GOLD_putative) E-value: 2.9e+3 Identity: 66.10% Query coverage: 19.47% Gaps: 5.08% Alignment: Query 163 AGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUG 221 || |||| | ||| |||||| | | ||| |||||| | ||||| |||||| Sbjct 40 GGGCGUGUAUGUGUGUGUGUGUGUGCAUCCAGCUGCACA---GCAUAAAAGAACUUUGA 95 >> URS0000ED2536_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 2.9e+3 Identity: 64.86% Query coverage: 24.42% Gaps: 4.05% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCU 237 |||||||| ||| |||||| | ||| ||| || || || || || || | | | ||||||||| Sbjct 27179 UGUGUGUGUGUGUGUGUGUGUGUGUUUUCACGUGUGCACUCAUAUCC---AAGUUUUCAGGGCGAUUCUAGCCC 27249 >> URS00009BC0ED_9595 Gorilla gorilla long non-coding RNA NONGGOT010299.1 E-value: 3e+3 Identity: 56.32% Query coverage: 26.40% Gaps: 19.54% Alignment: Query 128 CUGCGGUGCUAGAUUGGGCAUCUCUUA-------AAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 |||| ||||| || | ||| | || ||| | |||| ||||||||| | ||| |||||||| | | Sbjct 91 CUGC------AGAUUUGGGACUUCUCAGCCUCCAUAAACAUGAC----UUUUAUGCGAGUGUGAGGGCCAGCAGGUGCACAUUUGAA 167 >> URS00023A4CCD_42345 Phoenix dactylifera (date palm) long non-coding RNA (PDAC_LNC004554) E-value: 3e+3 Identity: 62.50% Query coverage: 26.40% Gaps: 1.25% Alignment: Query 47 CCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCU 126 | ||| | ||| | | | ||||| | ||| || | ||||||||| || ||| || | || |||| ||| | Sbjct 26210 CAUUGGAUAGCACACUGAUAAUCCUC-AUACUUGUUACAAGCAUACUAUCAAUCAGAACUCAUUGAUGUGCCUCCACUAU 26288 >> URS00023D856D_13443 Coffea arabica (coffee) long non-coding RNA (CARA_LNC002532) E-value: 3e+3 Identity: 51.02% Query coverage: 45.54% Gaps: 13.61% Alignment: Query 163 AGGUGUGUGUAUG-------UAUGUGUGAGGGUUAUCAGAUGC--ACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUC 239 ||| | | ||| | ||| ||||| | |||| | | | | | | ||||| || | | Sbjct 33770 AGGCGCUAGGAUGAUGAUUAUGUGUAAGAGGGCCACCAGAGAAGUAGAAGCAAACUGGUCCAUGUCUGA----AAGU-------UU 33844 Query 240 CGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAAUGAAUCUCACCUAUUGA 300 || | |||| ||||| || | ||||| || || ||||| ||| | ||||| Sbjct 33845 UGUGCCUAUGCAUUUCAUGAUGAAGACCUUAUUGAGGAAUGUAAUGUCCUUCAACGAUUGA 33905 >> URS00009B7753_10090 Mus musculus long non-coding RNA NONMMUT009165.2 E-value: 3.1e+3 Identity: 56.52% Query coverage: 37.29% Gaps: 7.83% Alignment: Query 117 CCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 |||| ||| | ||| | | ||| || | || | ||| ||| | |||||||||||| | || | || || Sbjct 453 CCCACACUGUGCUGUU---CCUCUUAAGGCUGCUUUCUGAA--GGGCUGUGCGUGGAAGUAUGUGUGAGGAUACACACAACAGCAA--GG 535 Query 207 AUAA--AUGAACUUCUGAUUGUAAU 229 |||| | || |||| | ||| | Sbjct 536 AUAAAGACGAUCUUCAGGUUGACAG 560 >> URS000230E136_4896 Schizosaccharomyces pombe (fission yeast) non-coding RNA E-value: 3.1e+3 Identity: 65.28% Query coverage: 22.11% Gaps: 6.94% Alignment: Query 29 UCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUA---CUAUCCUUUAA--UUUUGCUAUAUACAUACUAU 95 || ||||||| | | ||||||| || |||| | | ||| | || ||| | | ||||||||| | Sbjct 294 CCUAAAUGAAAAUGGGCUCCAUGGUCUGAUAAAUGAGUGCGAUCUUCAAAAUUUUGGUUGUAUACAUACGAA 365 >> URS0002515C6D_61616 Pelobates cultripes (western spadefoot toad) non-coding RNA E-value: 3.1e+3 Identity: 61.40% Query coverage: 18.81% Gaps: 14.04% Alignment: Query 145 GCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACA 201 | ||| ||| | |||||||| ||| |||||| | || | || |||| Sbjct 56 GAAUCACUUC--------AAGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUAUACACA 104 >> URS00023FD681_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC015142) E-value: 3.2e+3 Identity: 57.65% Query coverage: 28.05% Gaps: 7.06% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCC 240 | | || | |||| |||| ||| ||| | ||| ||||| | || | ||||| | |||| ||| ||| | Sbjct 9223 CAUU-AUGGGGGAGUGUCUGUAAUGCUGAAGGUCAGCAGCUGCACUCG-----AUGUGCAUUUCUGGCUCUAAUCCUAUACUUGC 9301 >> URS00026B4DA7_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 3.2e+3 Identity: 61.80% Query coverage: 29.37% Gaps: 1.12% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAU 252 |||| |||||| ||||||| || || | ||| | ||| | || | ||| ||| | ||||| ||| | ||| ||| Sbjct 1086 UGUGUAUGUAUGCAUGUGUGGUGG-UAGCCGAUUUCCUAUCGAGUCAAGCUAUUUCCGAUACUGAUUCUGUCCUGAUAUAGUGUUACAG 1173 >> URS000217E1B3_75864 Anas zonorhyncha (Eastern spot-billed duck) lncRNA (ENSAZOG00000012140.1) E-value: 3.2e+3 Identity: 57.78% Query coverage: 29.70% Gaps: 8.89% Alignment: Query 98 AUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 || ||| | | ||||| |||| || || || | | | | | ||| | | | ||| || | | |||| ||||| | Sbjct 2237 CCAAAACCCUCUUGAGAUCCCCAAACCCUCUUGAGAUCCAUGGUGGGG-ACCCCAAAAA-------UGUAUAUAUAUGGGAGUGUGGG 2316 Query 186 GG 187 || Sbjct 2317 GG 2318 >> URS0000EF71BD_30522 Bos indicus x Bos taurus (hybrid cattle) lncRNA (ENSBIXG00005000155.1) E-value: 3.2e+3 Identity: 58.10% Query coverage: 32.67% Gaps: 11.43% Alignment: Query 88 CAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUA---GAUUGGGCAUCUCUU--AAAA-CUUUGAGGUGUG 169 | | | || |||| || || |||| | || | || || | ||| || |||| | ||| | | | |||||| Sbjct 1132 GACAUUUUCACAGAGACAGUUCAG------CCAGCCCCUGCCGCUGUAUAAACCAAUUCUGCCUCUCAUGUAAAUCCAUGGGGGUGUG 1213 Query 170 UGUAUGUAUGUGUGAGG 186 ||| ||| |||||| | Sbjct 1214 UGUGUGUGUGUGUGUGU 1230 >> URS00027291C6_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 3.2e+3 Identity: 71.11% Query coverage: 14.85% Gaps: 2.22% Alignment: Query 143 GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 | ||+|||++||||||+|| | ||+|||| ||| |||||| | | Sbjct 5190 UGCCACCUCCCAAAACUCUGUG-UGCGUGUGUGUCUGUGUGUGUG 5233 >> URS0000E8AF22_308060 Apteryx rowi (Okarito brown kiwi) lncRNA (ENSARWG00000012273.1) E-value: 3.2e+3 Identity: 57.66% Query coverage: 34.98% Gaps: 6.31% Alignment: Query 99 UAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUG-----UGU 182 |||| |||| ||||| ||||| || | ||| | | |||| |||||| || ||| | ||| | ||| Sbjct 292 CAAGAGAUUUUGGAGAUACCCAGUCUUCAGUGCAGCUAAGGCUUGG--AUCUCUAGGUUUGCAGAAGUGGUUAGAUGGACACGCCCUGU 378 Query 183 GAGGGUUAUCAGAUGCACAUUC 204 |||| |||||| || | || Sbjct 379 CAGGGAUAUCAGUGCCAUAAUC 400 >> URS000259A02C_9606 Homo sapiens (human) ncRNA E-value: 3.3e+3 Identity: 63.89% Query coverage: 22.44% Gaps: 5.56% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGAGGGU 188 |||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| | | Sbjct 1570 GACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGUAGCU 1641 >> URS00025DE745_9606 Homo sapiens (human) ncRNA E-value: 3.3e+3 Identity: 63.89% Query coverage: 22.44% Gaps: 5.56% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGAGGGU 188 |||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| | | Sbjct 1657 GACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGUAGCU 1728 >> URS000251135D_9606 Homo sapiens (human) ncRNA E-value: 3.3e+3 Identity: 63.89% Query coverage: 22.44% Gaps: 5.56% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGAGGGU 188 |||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| | | Sbjct 2262 GACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGUAGCU 2333 >> URS000251A86D_9606 Homo sapiens (human) ncRNA E-value: 3.3e+3 Identity: 63.89% Query coverage: 22.44% Gaps: 5.56% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGAGGGU 188 |||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| | | Sbjct 2040 GACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGUAGCU 2111 >> URS00025B0B96_9606 Homo sapiens (human) ncRNA E-value: 3.3e+3 Identity: 63.89% Query coverage: 22.44% Gaps: 5.56% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGAGGGU 188 |||| | || || | | ||||||| ++|| |||||| | |||||||| ||| |||||| | | Sbjct 1430 GACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGUAGCU 1501 >> URS00008B6DCE_9606 Homo sapiens (human) non-protein coding lnc-EPRS-4:1 E-value: 3.3e+3 Identity: 62.34% Query coverage: 23.43% Gaps: 7.79% Alignment: Query 175 GUAUGUGUGAGGGUUAUCAGAUGCA------CAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCU 245 | | ||| || ||| ||||| ||||| || ||| |||| ||||| |||||| | |||| | | | Sbjct 256 GAGUUUGUAGAUGUCAUCUGAUGCCCAAAAGCAUUCAGAAAAAAAAACUGUUGAUUUUAAUUCCAUCCUUUCAACUU 332 >> URS00023E4828_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC002675) E-value: 3.3e+3 Identity: 53.38% Query coverage: 39.60% Gaps: 14.29% Alignment: Query 183 GAGGGUUAUCAGAUGCACAUUCGGAU-------------AAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUG 256 || || ||||||| || | || | | |||||| | ||| |||| | || |||| |||| Sbjct 13143 GAUCGUCAUCAGAUUCAGACACGAGUUCAGAACCAAUAAGGAGCAACUUCAGUUUGCAAUUUCAAA------CCCAGUGAGGUUCUC 13223 Query 257 UGAUGUAGUCGUUAUUCAGUGAUAUAAUGAAUCUCACCUAUUGAUA 302 | ||| || | ||| | || || || | | | ||| ||||| Sbjct 13224 UUAUGCAGCCAAUAUCCCGUCCUAAGAUCUAGCCCUUCUACUGAUA 13269 >> URS0001A21851_74940 Oncorhynchus tshawytscha (Chinook salmon) lncRNA (ENSOTSG00005004789.1) E-value: 3.3e+3 Identity: 65.22% Query coverage: 20.79% Gaps: 8.70% Alignment: Query 124 UCUACUGCGGUGCUAGAUUG-----GGCAUCUCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGG 186 | | || |||||| || | | |||| || |||| ||| |||||||| ||| |||||| | Sbjct 775 ACACCAGCAGUGCUACAUGGUGAGUGACAUCACUAGCAACUAUGAAAGUGUGUGUGUGUGUGUGUGUGU 843 >> URS0000B2E25E_10116 Rattus norvegicus long non-coding RNA NONRATT006401.2 E-value: 3.3e+3 Identity: 60.95% Query coverage: 33.00% Gaps: 7.62% Alignment: Query 85 AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUAC----UGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-GUGUG 169 ||| || | | | | | | || ||| || ||| || | | ||| | || ||| || ||| |||| || || ||||| Sbjct 23 AUAUAUGCCACACCUUUGGUUUCUUGGAGCAGCACAGUCUAUGCAUGCAGCGUUCCUCCAUU---CAAAACUUUAAACAUUUAGUGUGUG 109 Query 170 UGUAUGUAUGUGUGA 184 ||| ||| |||||| Sbjct 110 UGUGUGUGUGUGUGU 124 >> URS0000ECF864_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 3.3e+3 Identity: 54.60% Query coverage: 54.13% Gaps: 6.32% Alignment: Query 25 ACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUA--UCCUUUAAUUUUGC--UAUAUACAUACUAUCCAUAAGACC 105 ||||| | |||| | |||||||| |||| || || || ||| ||| | | || || || ||| Sbjct 99738 CCAAUCACAAAGAAACAGGUUUCCAUGG-AAGCAAUAUCACGGAUUCAUUUCAUUCUCAAUGAAAUCCACACAGCAAGACAGAUA 99821 Query 106 UUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAU---UGGGCAUCUCUU---AAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 | | | | |||| | | || | | || |||| | | || |||| ||||||||| ||| |||||| Sbjct 99822 UGUAAAAAUAACCCAUAUAAAAUUGAAGCAAAAUAUUUCUGGGUGUUUGUUCUAUGCCUUUUGGGGUGUGUGUGUGUGUGUGUGU 99906 Query 185 GGGU 188 | || Sbjct 99907 GUGU 99910 >> URS0002624483_210409 Portunus trituberculatus (Swimming crab) uncharacterized LOC123507596 E-value: 3.3e+3 Identity: 64.62% Query coverage: 20.79% Gaps: 3.08% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU--GAACUUCUGAUUGUAA 228 ||||||| ||| |||||| | ||+ ||+ |||||||| | |||+ || | ||||| | Sbjct 231 UGUGUGUGUGUGUGUGUGUGUGUCUAAGGACCCACAUUCGCAAAAACUUCUACAUAUGAUUAAAG 295 >> URS0000D56CEE_9606 Homo sapiens (human) non-protein coding MIR194-2HG:6 E-value: 3.4e+3 Identity: 56.14% Query coverage: 34.65% Gaps: 7.89% Alignment: Query 84 UAUACAUACUAUCCAUAAGACCUU--UUAGAGAUGCCCAGACUCU--ACUGCGGUGCUAGAUUGGGCAUCUCUUAAAA---C--UUUGA 163 || || | | | | || || || || || ||| | | | | || || | || | || | || | | || Sbjct 7944 AGUAGAUGCCAGCAACAAUCCCCAAAAUAAUCAUACCAAGAAUGUCCCCGGGGGAGCAAAAUCACACCCAGCUGAGAAUCACUGUGUGG 8032 Query 164 GGUGUGUGUAUGUAUGUGUGAGGGU 188 ||||||||| |||||||||| | || Sbjct 8033 GGUGUGUGUGUGUAUGUGUGUGUGU 8057 >> URS0000D5C4C9_9606 Homo sapiens (human) non-protein coding MIR194-2HG:5 E-value: 3.4e+3 Identity: 56.14% Query coverage: 34.65% Gaps: 7.89% Alignment: Query 84 UAUACAUACUAUCCAUAAGACCUU--UUAGAGAUGCCCAGACUCU--ACUGCGGUGCUAGAUUGGGCAUCUCUUAAAA---C--UUUGA 163 || || | | | | || || || || || ||| | | | | || || | || | || | || | | || Sbjct 7032 AGUAGAUGCCAGCAACAAUCCCCAAAAUAAUCAUACCAAGAAUGUCCCCGGGGGAGCAAAAUCACACCCAGCUGAGAAUCACUGUGUGG 7120 Query 164 GGUGUGUGUAUGUAUGUGUGAGGGU 188 ||||||||| |||||||||| | || Sbjct 7121 GGUGUGUGUGUGUAUGUGUGUGUGU 7145 >> URS00009B6A6B_10090 Mus musculus long non-coding RNA NONMMUT064315.2 E-value: 3.4e+3 Identity: 67.92% Query coverage: 17.49% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAAC 216 ||| ||| ||||||||||| | ||| || |||||| | | | |||| Sbjct 272 UGUGCGUGCAUGUAUGUGUGCGUGUUCUCGGAUGCAGAGGCCUGCGAGGGAAC 324 >> URS00009BBDC0_10090 Mus musculus long non-coding RNA NONMMUT077127.1 E-value: 3.4e+3 Identity: 59.81% Query coverage: 32.34% Gaps: 8.41% Alignment: Query 115 UGCCCAGA---CUCUACUGCGGUGCUAGAUUGGGCAUCUC--UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUA----UCAGA 195 ||||||| || | | | || || | | | | |||| | || || | ||||||||| | |||||| | || ||| | Sbjct 813 GGCCCAGAAGGCUUUUCGGGGGAGCCACAAUCAGUUUCUCAGUCUCUGCUGUGUGUUGUGUGUAUUUGUGUGUGUUGUAUAUGUGUCACA 902 Query 196 UGCACAUUCGGAUAAAU 212 |||| || | ||| | Sbjct 903 UGCAUAUACACAUAGAC 919 >> URS0000BC6E43_885580 Fukomys damarensis (Damara mole rat) lncRNA (ENSFDAG00000028963.1) E-value: 3.4e+3 Identity: 56.52% Query coverage: 28.05% Gaps: 14.13% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA-------UGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 | || ||| |||| | || |||||| |||| || || ||| |||||| ||| | |||| | || | | | Sbjct 874 U----GUU--UAUAUGUGUGUGUGCCCAGAUGGACAUAAGGGCAAGUUGGGGGUGAUCUUCUGUUUGCAGUUCUUGUCUGACUGCUUUC 956 Query 248 GAC 250 | | Sbjct 957 GGC 959 >> URS0002418848_4513 Hordeum vulgare (H. vulgare) long non-coding RNA (HVUL_LNC007819) E-value: 3.4e+3 Identity: 58.43% Query coverage: 29.37% Gaps: 1.12% Alignment: Query 131 CGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU 217 || | || | |||||| | || || || ||| | ||||| ||| | |||| | || || |||| | | ||| Sbjct 46341 CGUCUGUUGAGUUGGCAUCGAUCAAGACCGGGAUUUGUCACUCCGUAUGACGGAGAGGUAUCUGGGGCCCACUCGGUAAUAC-AACA 46426 Query 218 UC 219 || Sbjct 46427 UC 46428 >> URS000236EE25_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC004495) E-value: 3.4e+3 Identity: 62.35% Query coverage: 28.05% Gaps: 5.88% Alignment: Query 36 GAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCA 120 | || || || |||| | | | | || ||| ||| | |||||||| ||| || || | || |||| ||||||| Sbjct 21232 G-AAUCGUGUCCCAUAUGCUUCGGAUAUAGGAUCGAUUACAUGUGCUAUAUUCAUCCUGUCUAAAA----UUUUCCAGAUGCCUG 21311 >> URS0002398594_57918 Fragaria vesca (wild strawberry) long non-coding RNA (FVES_LNC003203) E-value: 3.4e+3 Identity: 63.95% Query coverage: 27.39% Gaps: 4.65% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAAC---UUCUGAUUGUAAUUCUAG 234 || | |||||| |||||| |||| ||| ||| || | ||||| ||||| |||| | | ||| ||| ||| Sbjct 106882 AAGAAUUUGAGAUGUGUG-AUGUUUGUUUGAAGGACAACAGAUCACUGGACGGAUGAAUGCCCGUACUUGGAUCGUAUCCCUAA 106964 Query 235 CC 236 || Sbjct 106965 CC 106966 >> URS0001A17045_74940 Oncorhynchus tshawytscha (Chinook salmon) lncRNA (ENSOTSG00005004789.1) E-value: 3.4e+3 Identity: 65.22% Query coverage: 20.79% Gaps: 8.70% Alignment: Query 124 UCUACUGCGGUGCUAGAUUG-----GGCAUCUCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGG 186 | | || |||||| || | | |||| || |||| ||| |||||||| ||| |||||| | Sbjct 194 ACACCAGCAGUGCUACAUGGUGAGUGACAUCACUAGCAACUAUGAAAGUGUGUGUGUGUGUGUGUGUGU 262 >> URS00009BEDE9_10090 Mus musculus long non-coding RNA NONMMUT027453.2 E-value: 3.5e+3 Identity: 63.16% Query coverage: 21.45% Gaps: 14.47% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCUUU-----UAGAGAU 115 ||| |||| | | ||| | || ||| ||||||||| |||||||||||| || | |||||| Sbjct 97 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUACAGACUAUCCAUAAGUUCUGUGACUCUAGAGAA 172 >> URS0001979ED4_9823 Sus scrofa (pig) lncRNA (ENSSSCG00065043422.1) E-value: 3.5e+3 Identity: 61.18% Query coverage: 28.05% Gaps: 2.35% Alignment: Query 12 CAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUC 96 | | | |||| || |||| ||| || || || ||| ||| || ||| ||||||||| || | | || || || Sbjct 1170 CCUUCUGUCCAGCAGGUUCUUACUGAGCACCAGCUCUGUGGCUUGAGGAAGUAC--CCCUUUAAUUCUGACAGAAACCCACCAUG 1252 >> URS0001954E14_441366 Gouania willdenowi (blunt-snouted clingfish) tyrosine-protein phosphatase non-receptor type 18- like (ENSGWIG00000012154.1) E-value: 3.5e+3 Identity: 57.89% Query coverage: 26.07% Gaps: 17.89% Alignment: Query 137 UAGAUUGGGCAUCUCUUAAAACUUUGAG-----GUGUGUGUAUGUAUGUGUGAGGG-----------UUAUCAGAUGCACAUUCGGAUA 209 ||| ||| | || || | | |||| |||||||| |||| ||||| | | || ||||| | | | ||| | Sbjct 877 CAGACUGGACUCAUC-UACAGCCCUGAGUGUGUGUGUGUGUGUGUACGUGUGCGCGUGUGUCUGUGUUUCUCAGAAGUAUCUCUGGAAA 964 Query 210 AAUGAA 215 |||| | Sbjct 965 AAUGUA 970 >> URS000195ED5A_9823 Sus scrofa (pig) lncRNA (ENSSSCG00065043422.1) E-value: 3.5e+3 Identity: 61.18% Query coverage: 28.05% Gaps: 2.35% Alignment: Query 12 CAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUC 96 | | | |||| || |||| ||| || || || ||| ||| || ||| ||||||||| || | | || || || Sbjct 203 CCUUCUGUCCAGCAGGUUCUUACUGAGCACCAGCUCUGUGGCUUGAGGAAGUAC--CCCUUUAAUUCUGACAGAAACCCACCAUG 285 >> URS000196E6FA_9823 Sus scrofa (pig) lncRNA (ENSSSCG00065043422.1) E-value: 3.5e+3 Identity: 61.18% Query coverage: 28.05% Gaps: 2.35% Alignment: Query 12 CAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUC 96 | | | |||| || |||| ||| || || || ||| ||| || ||| ||||||||| || | | || || || Sbjct 2420 CCUUCUGUCCAGCAGGUUCUUACUGAGCACCAGCUCUGUGGCUUGAGGAAGUAC--CCCUUUAAUUCUGACAGAAACCCACCAUG 2502 >> URS0001953CDC_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025075202.1) E-value: 3.5e+3 Identity: 61.18% Query coverage: 28.05% Gaps: 2.35% Alignment: Query 12 CAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUC 96 | | | |||| || |||| ||| || || || ||| ||| || ||| ||||||||| || | | || || || Sbjct 203 CCUUCUGUCCAGCAGGUUCUUACUGAGCACCAGCUCUGUGGCUUGAGGAAGUAC--CCCUUUAAUUCUGACAGAAACCCACCAUG 285 >> URS0000EB429F_9606 Homo sapiens (human) HSALNT0258632 E-value: 3.6e+3 Identity: 54.10% Query coverage: 40.26% Gaps: 3.28% Alignment: Query 88 CAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 |||| ||| | | ||| | | | |||||| |||| |||| | | || || ||||||| | || || Sbjct 631 CAUAAUAUUUACAGAGCCUCUAUGCACUCCCCAGAAGAUACUUAAUAAUUAGAAAGAA--UG--AAGUUACAGUGGGGUGUGUAUGUGCAU 717 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUA 209 ||||| |||| | |||||| | || Sbjct 718 GUGUGCGGGUGCAUGCAGGCACAUGUGUGUA 748 >> URS00009C4A24_10090 Mus musculus long non-coding RNA NONMMUT051642.2 E-value: 3.6e+3 Identity: 52.24% Query coverage: 43.56% Gaps: 12.69% Alignment: Query 155 AAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCC--UUCC 240 || | |||||||||| ||||||| | | ||||| | | | ||||| || ||| | | | || || Sbjct 2451 AAGGU-----AUGUGUGUAUGCAUGUGUGUAUG----UGGGUGCACGUGCAUAAAAAUGCACACCUGCUGGGUGCGCCUGCUGGUUAG 2529 Query 241 GUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAAUGA 286 | | | |||| || || || | | ||| ||||| Sbjct 2530 ACUCAGGGGCAUUGUGCUAUU------UUCUAUAAUGACUCAAUGA 2569 >> URS0002723A6F_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 3.6e+3 Identity: 54.55% Query coverage: 35.97% Gaps: 14.05% Alignment: Query 78 UUGCUAUAUACA----UACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU--------CUU 153 | || | ||| ||||| ||| ||||| || | | | ||| | |||| | || |||| | | Sbjct 1207 CUCAUAAAAACACUUGCACUAUUCAU---GUCUUUUC--CAUACUCGCAUUCUCUUUCGGUACCAGCUUGGUCGUAAUGUGCUGAGCC 1289 Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 | |||| | |||||||| ||| |||||| | Sbjct 1290 AGAACUCAGCUGUGUGUGUGUGUGUGUGUGUGU 1322 >> URS00027F1BC6_10181 Heterocephalus glaber (naked mole-rat) lncRNA (ENSHGLG00000038912.1) E-value: 3.6e+3 Identity: 54.55% Query coverage: 33.00% Gaps: 12.73% Alignment: Query 117 CCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU----UAUCAGAUGCAC 200 | | ||| ||||| || ||| | || ||| | |||||||| || ||||||| | || | ||| || Sbjct 3513 CUCUAACUGAACUGCUUUGUGAGACC----CUGUCCAAAAGAAAUUGUGUGUGUGUGUGCAUGUGUGCGUGUGUGCACCUAUAUGUAC 3596 Query 201 AU------UCGGAUAAAUGAAC 216 || | || ||||||| Sbjct 3597 AUAUAUCUUAGGGCAAAUGAAA 3618 >> URS0002305020_9031 Gallus gallus (chicken) non-coding RNA E-value: 3.6e+3 Identity: 73.81% Query coverage: 13.86% Gaps: 0.00% Alignment: Query 7 CGUGACAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCC 48 || | |||||||||| || | ||| ||||||||||| | Sbjct 805 GGUCAGAUCCAGUCCUGCAACACUUUGUUGAAAACGAGUCGC 846 >> URS00028351FC_7011 Schistocerca nitens (Vagrant locust) n-acetylneuraminate 9-O-acetyltransferase E-value: 3.6e+3 Identity: 48.00% Query coverage: 56.44% Gaps: 22.86% Alignment: Query 16 CAGUCCUACACAAUCUUGAUGAAAA----CGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUA 100 ||| || | | | | |||||| | || | ||||||| ||| | ||| ||| |||| | Sbjct 7047 CAGCCCCAUAUAUUUGUGAUGACACAAUCUAAGAUGAAUGGGUUUCAAUCAGUCAAUC------------AAUAAACAUCAUG------ 7117 Query 101 AGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 || || ||| |||| | ||| | || | || | ||||||||||| ||| |||||| | Sbjct 7118 --------UACUGACAUUGCACCUCAACUGGGCUGC----------AGUACUGAUAAAGUGGAGGUGUGUGUGUGUGUGUGUGUGU 7185 >> URS0001A1B982_8010 Esox lucius (northern pike) lncRNA (ENSELUG00000031091.1) E-value: 3.6e+3 Identity: 64.47% Query coverage: 24.42% Gaps: 2.63% Alignment: Query 114 AUGCCCAGACUCUACUGCGG--UGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 |||||| | || |||| | | ||||| ||| |||| | | ||||||| ||| |||||||||| Sbjct 1391 CUGCCCACAUUCAACUGAAGCCUCACAGAUUAACCAUUUCUUUGGAAGAGAAACUGUGUGUGUGUGUGUGUGAGGG 1466 >> URS0001965A04_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005008590.1) E-value: 3.6e+3 Identity: 63.33% Query coverage: 19.80% Gaps: 6.67% Alignment: Query 150 UCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA 209 ||| ||| || || ||||| || |||||||||| || | ||||| | | | Sbjct 4053 GCUUUAAAAUUAGAAGUGUGCGUGUGUAUGUGUGCA----CACACACACACAUACACACA 4108 >> URS00009C0D95_10090 Mus musculus long non-coding RNA NONMMUT032901.2 E-value: 3.7e+3 Identity: 50.58% Query coverage: 50.83% Gaps: 13.37% Alignment: Query 90 UACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAG---AUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 |||| | | | | | | | | || | || | | ||| | || || || | || || | || ||| ||||| | Sbjct 2767 UACUGUUUACACAAACCUCUGGGGACCUUCCGAAUA-AAUGCAGAGCAAGUGAGUUAGACAAACCUCUGGGCCCUGUGGUCUGUGUGU 2853 Query 175 GUAUGUGUGAGGGUUAUC----------AGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGU-----AAUUCUAGCCUUCCGUC 243 || |||||| | |||| | ||| | | || | | ||| | | | || |||||||||| Sbjct 2854 GUGUGUGUGUGUGUUAGUGUGGGGGAAACUUUCCACCCUUAGCUA----AGCCUCUACUCUUCAGUCCACUCCAGCCUUCCGUU 2933 >> URS0002410C00_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC028043) E-value: 3.7e+3 Identity: 58.96% Query coverage: 41.58% Gaps: 6.72% Alignment: Query 83 AUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACU-C---UACUGCGGUGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGG 165 ||||| | | +| || || | +|||||| | ||||| + ||||| | | | ||| | | | |||| | | |||| | Sbjct 4533 AUAUAAAAAUCAACCUAAAAUCUACUUAGAGCUUUCCAGAUCUGGAAUACUGAUUU-CAAAAUUUGCACCCUUUCUUGAUAUUUUGGAG 4620 Query 166 UGUGUGUAUGU--AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU 208 +|||||| ||| ||| ||||| || | | | | ||| | || Sbjct 4621 CGUGUGUGUGUAGAUGAGUGAGAGUGAAUCGGUCCCUAUUUGCAU 4665 >> URS00023D5342_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC001619) E-value: 3.7e+3 Identity: 56.83% Query coverage: 44.88% Gaps: 3.60% Alignment: Query 61 AUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCA--UAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGG 145 | | || | ||| || ||||| | ||| || | ||||| ||| | | | ||| | | | || | || Sbjct 46493 ACGAUUAGCUGCUAAGGUUAAUAUAUUCCAACUUCGCAACUCAGACCCAGUAGGAACCCAAGCAAUCUUGUUUGUU--GAGUGUAGG 46577 Query 146 CAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCA-GAU 196 ||| |||||| | ||| ||||||||| ||||||| || | ||| Sbjct 46578 CAUACCUUAAAUUUAUGACUGAGAUGUAUGUAUUGCUGAGGGUGAUUAAGAU 46629 >> URS0002410C00_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC028043) E-value: 3.7e+3 Identity: 58.96% Query coverage: 41.58% Gaps: 6.72% Alignment: Query 83 AUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACU-C---UACUGCGGUGCUAGAUUGG--GCAUCUCUUAAAACUUUGAGG 165 ||||| | | +| || || | +|||||| | ||||| + ||||| | | | ||| | | | |||| | | |||| | Sbjct 4533 AUAUAAAAAUCAACCUAAAAUCUACUUAGAGCUUUCCAGAUCUGGAAUACUGAUUU-CAAAAUUUGCACCCUUUCUUGAUAUUUUGGAG 4620 Query 166 UGUGUGUAUGU--AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU 208 +|||||| ||| ||| ||||| || | | | | ||| | || Sbjct 4621 CGUGUGUGUGUAGAUGAGUGAGAGUGAAUCGGUCCCUAUUUGCAU 4665 >> URS0000E5DEEE_7266 Drosophila guanche non-coding RNA E-value: 3.7e+3 Identity: 66.10% Query coverage: 17.82% Gaps: 11.86% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUG----A-GGGUUAUCAGAUGCACAUUC 204 ||| |||||| | ||||||| ||| |||||| |||| |||| | || || Sbjct 231 CUU--CACUUUGUGAUGUGUGUGUGUGUGUGUGUGUGUGGGGUAAUCAAAAAUCCACUC 287 >> URS000195A155_158456 Betta splendens (Siamese fighting fish) lncRNA (ENSBSLG00000000499.1) E-value: 3.7e+3 Identity: 62.04% Query coverage: 35.31% Gaps: 1.85% Alignment: Query 70 CUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCG-GUGCUAGAUUGGGCAUCUCUUAAAA 157 || ||| | || || | | | ||||||| ||| |||||| | ||| ||| | || | || | | | |||| | |||| Sbjct 745 CUGUAAGGUCUCUGUAAAUUUUCAUUCCAUAAAACCCUUUAGAU-CGUCCACACUGCAAUGUGUGUUUUUCACUCCCCAUCAGUAAAAA 832 Query 158 CUUUGAGGUGUGUGUAUGU 176 || || |||| || ||| Sbjct 833 CUCUGGUUUGUGGGUGUGU 851 >> URS00009C5634_10090 Mus musculus long non-coding RNA NONMMUT000698.2 E-value: 3.8e+3 Identity: 50.35% Query coverage: 38.94% Gaps: 17.02% Alignment: Query 110 AGAGAUGCCCAGA--CUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG---------------------GUGUGUGUAUGU 176 ||| | ||| | |||||| | | | | | || | | | |||| || | |||||||| ||| Sbjct 860 AGAAAAGCCUAACAUCUCUACCGUAGGGAUUGUUUUUUCUUUUUAAAAAAAG-UGCGUGUGCGUGUGCGUGUGCGUGUGUGUGUGUGUGU 948 Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUA 227 |||||| | | | | ||||| || | | ||| | | || || | Sbjct 949 GUGUGUGUGCGCGCGCGCACGCACACACGCACAUAUGUAUGUAUGUAUGCA 999 >> URS00023577D6_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC016639) E-value: 3.8e+3 Identity: 56.52% Query coverage: 37.62% Gaps: 12.17% Alignment: Query 134 UGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU-GAACUUC 219 |||| | ||||| || | ||| ||||||||| ||| |||||||| | | | || || | | || Sbjct 33622 UGCUUAAGUGGGCGUCACAUAAC------UGGUGUGUGUGUGUGUGUGUGAGAGAG-------AGAGACUCUGAGAGACAGAGUGCA 33695 Query 220 UGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 || || | |||| |||| | | ||| Sbjct 33696 UGUGUGCGACUCUACUCUUCGGACAUGU 33723 >> URS00023CB7DF_13333 Amborella trichopoda (A. trichopoda) long non-coding RNA (ATRI_LNC000325) E-value: 3.8e+3 Identity: 65.31% Query coverage: 16.17% Gaps: 0.00% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 |||||| | ||||||| ||| |||| | |||| | ||| | | Sbjct 14238 CAAACUUAUAUAUGUGUGUGUGUUUGUGGGUGGGUGCCUAUAUGUAUAC 14286 >> URS0002192948_158383 Olea europaea subsp. europaea non-coding RNA E-value: 3.8e+3 Identity: 56.57% Query coverage: 32.67% Gaps: 0.00% Alignment: Query 95 UCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUG 181 || ||||| |||| | | |||| || ||| | | |||| | | | | | |||| || |||| | ||| ||| Sbjct 3955 GCCCUAAGAUUUUUUGGUGUCGCCCCCUCUAGACUUCUAUCCUAGGUCUGCCCCCAAUCAAAAGAAUGUGGUGGAUAUAUAUAUACA 4041 Query 182 UGAGGGUUAUCA 193 ||| ||| Sbjct 4042 CGAGAAAGUUCA 4053 >> URS0000CEB86D_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 3.8e+3 Identity: 52.63% Query coverage: 42.90% Gaps: 13.53% Alignment: Query 95 UCCAUAAGACCUUUUAGAGAUGCCCAGACUC---UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || |||| ||||||| | | | | | ||| | | ||| | ||| | |||||||| ||| | Sbjct 10766 UCUAUAA--------GGAGAUGCACCAAGUUGUUAUCAGUGGUUCCCCCUAGGGAAAAA---GAAAGUG---UGUGUGUGUGUGUGU 10838 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 ||||| | || || ||||| | || | || ||| | || Sbjct 10839 GUGUGUGUGUGUGCACAUGCAUGUGCGUGCACAUA-CUUUCCGUUU 10883 >> URS0000C85A64_1245745 Beauveria bassiana D1-5 sraL Hfq binding RNA E-value: 3.8e+3 Identity: 71.70% Query coverage: 16.83% Gaps: 3.77% Alignment: Query 142 UGGGCAUCUCUUAAAACUUUGAGGUGUGU--GUAUGUAUGUGUGAGGGUUAUC 192 || | ||| || | ||| |||||| |||||||||||| || |||||| Sbjct 12 CCGGAACCUCCAAAGUCAGUGAAGUGUGUACGUAUGUAUGUGUAAGCGUUAUC 64 >> URS00023DCE52_3067 Volvox carteri (V. carteri) long non-coding RNA (VCAR_LNC003307) E-value: 3.8e+3 Identity: 62.34% Query coverage: 25.41% Gaps: 10.39% Alignment: Query 127 ACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUU 203 ||| | ||||| | |||||| ||||| | |||||| |||| || || ||||| | || ||| | Sbjct 28830 ACUUCCUUGCUA---CGAGCAUCUUCGAAAACAUCGAGGUGGGUGUGUGGGUG-----GGGUUUCAUGGUGUACAAU 28898 >> URS0000A91F19_9940 Ovis aries (sheep) lncRNA (ENSOARG00000026990.1) E-value: 3.8e+3 Identity: 52.21% Query coverage: 41.25% Gaps: 19.85% Alignment: Query 86 UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGA--UUGGGCAUCUCUUAAAACUUUGAG-------- 164 | || |||| | || ||| || | | | |||| |||| | ||| | |||| ||| | || Sbjct 2731 GAGAUCGUAUCAAGGAGGUCUUG---AG--GGGCCGCCUCUCCUGCAGGCAUAGUAUUCUGGCACUAAAAUUAACAUGGAUGCGCCUCG 2814 Query 165 -GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 |||||||| |||||| |||||||| || |||||| Sbjct 2815 UGUGUGUGUGUGUAUGAGUGAGGGUCAU-----------GUGGAUAA 2850 >> URS0002524372_9606 Homo sapiens (human) ncRNA E-value: 3.9e+3 Identity: 62.86% Query coverage: 22.11% Gaps: 7.14% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUUGGGCAUC--UCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGG 187 |||| | || | ||| || | || ||| |||| | || | | ||||| ||| |||||| | | Sbjct 2140 CACUCCAGCCUGGCGACAGAGUGAGACUCCGUCUCAAAAAUGUGUGUG--UGUGUGUGUGUGUGUGUGUG 2207 >> URS00009C3F4F_10090 Mus musculus long non-coding RNA NONMMUT009166.2 E-value: 3.9e+3 Identity: 54.87% Query coverage: 37.29% Gaps: 4.42% Alignment: Query 116 GCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||||| ||| | ||| | | ||| || | || | ||| ||| | |||||||||||| | || | || Sbjct 32 GCCCACACUGUGCUGUU---CCUCUUAAGGCUGCUUUCUGAA--GGGCUGUGCGUGGAAGUAUGUGUGAGGAUACACACAACAGCAAGGA 116 Query 206 GAUAAAUGAACUUCUGAUUGUAA 228 | | | || |||| | ||| | Sbjct 117 UAAAGACGAUCUUCAGGUUGACA 139 >> URS0002804933_36100 Haliotis rubra (Blacklip abalone) uncharacterized LOC124280461 E-value: 3.9e+3 Identity: 60.26% Query coverage: 23.10% Gaps: 10.26% Alignment: Query 142 UGGGCAUCUCUUAAAACUUUGA--GGUGUGUGUAUGUAUGUGUGAG----GGU--UAUCAGAUGCACAUUCGGAUAAA 211 ||||| || || ||||| ||||||||| |||||||||| | || | | | | | ||||| | Sbjct 520 UGGGCGGAUCCAGGAAUUUUGAAAGGUGUGUGUGUGUAUGUGUGUGUGUGUGUGUUUCGAACCCCCCCUCCGGAUCCA 597 >> URS000195B3FF_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005029392.1) E-value: 3.9e+3 Identity: 56.63% Query coverage: 23.76% Gaps: 15.66% Alignment: Query 117 CCCAGACUCUACUGCGGUGCUAGAUUGGGCAU-----------CUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 || |||| |||| ||| || |||| | | | |||| ||||||||| ||| |||||| | || Sbjct 2572 CCAAGACAAAACUGAGGUCCUUACACUUGCAUUGUUACAUCCACACACACAACUG--GGGUGUGUGUGUGUGUGUGUGUGUGU 2652 >> URS00025E9C62_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000063239.1) E-value: 3.9e+3 Identity: 65.82% Query coverage: 23.76% Gaps: 12.66% Alignment: Query 113 GAUGCCCAGACUCUACUGCGGUG-CUAGAUUGGGCAUCUCU------UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 |||||| | ||| | || |+ ||||||| || ||| |||||| ++||||||||||| |||| ||||| Sbjct 1751 GAUGCCAAUGAACUA---GGAUGACCUGAUUGGGAAUUUCUAUUAAAUAAAACACCGAGGUGUGUGUGUGUAGGUGUGU 1826 >> URS000075C4A9_9606 Homo sapiens (human) ARHGAP44 and MYOCD antisense RNA 1 (ARHGAP44-AS1) E-value: 4e+3 Identity: 57.66% Query coverage: 35.64% Gaps: 8.11% Alignment: Query 122 ACUCUACUGCGGUGCUAGAUUGGGCAUC--UCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 |||| | || | ||| || | || ||| |||| | || | |||||||| ||| |||||| | || || | | Sbjct 2185 ACUCCAGCCUGGCGACAGAGUGAGACUCCGUCUCAAAAAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU------GUGUGUGUGUGUG 2267 Query 208 UAAAUGAACUUCUGAUUGUAAU 229 | ||| | |||||| || Sbjct 2268 UGUAUGGGCAUCUGAUAUGAAC 2289 >> URS00005D80C5_9606 Homo sapiens (human) ARHGAP44 and MYOCD antisense RNA 1 E-value: 4e+3 Identity: 57.66% Query coverage: 35.64% Gaps: 8.11% Alignment: Query 122 ACUCUACUGCGGUGCUAGAUUGGGCAUC--UCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 |||| | || | ||| || | || ||| |||| | || | |||||||| ||| |||||| | || || | | Sbjct 2143 ACUCCAGCCUGGCGACAGAGUGAGACUCCGUCUCAAAAAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU------GUGUGUGUGUGUG 2225 Query 208 UAAAUGAACUUCUGAUUGUAAU 229 | ||| | |||||| || Sbjct 2226 UGUAUGGGCAUCUGAUAUGAAC 2247 >> URS0000D5C009_9606 Homo sapiens (human) non-protein coding lnc-ELAC2-3:2 E-value: 4e+3 Identity: 57.66% Query coverage: 35.64% Gaps: 8.11% Alignment: Query 122 ACUCUACUGCGGUGCUAGAUUGGGCAUC--UCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 |||| | || | ||| || | || ||| |||| | || | |||||||| ||| |||||| | || || | | Sbjct 2185 ACUCCAGCCUGGCGACAGAGUGAGACUCCGUCUCAAAAAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGU------GUGUGUGUGUGUG 2267 Query 208 UAAAUGAACUUCUGAUUGUAAU 229 | ||| | |||||| || Sbjct 2268 UGUAUGGGCAUCUGAUAUGAAC 2289 >> URS00022B4689_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00845007461.1) E-value: 4e+3 Identity: 58.11% Query coverage: 24.42% Gaps: 0.00% Alignment: Query 69 CCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUU 142 || | ||||| || |||| | | |||| | ||| | | ||||| | |||||| ||| | | Sbjct 273 CCAGGAGUUUUGAAAUUUACACAGUUUCCAGAUGACUCUCUUGAGAUCUUCGCACUCUAUGAUUCUGCAGGUCU 346 >> URS000236ABB3_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC011153) E-value: 4e+3 Identity: 53.44% Query coverage: 36.63% Gaps: 15.27% Alignment: Query 151 CUUAAAACUU----UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAU-----------GCACAUUCGG----A-UAAAUGAACUUC 219 |||||| || |||| ||| | ||| ||||||| | || | || ||| || | | | ||| ||| || Sbjct 4010 CUUAAACCUCGUGGAGAGGCGUGGGCAUGCAUGUGUGUGCUUUUUUAGGAUAACCUCGGCGGCAGAUCCAGCCUGAGAAAAGGAAAAUC 4098 Query 220 UGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUG 261 | |||| | | | | ||||| || | ||||| Sbjct 4099 CGGUUGUCACUUUCCAUAUGAAUCCUGGGAUGUCAUGUGAGU 4140 >> URS00025EA229_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000095813.1) E-value: 4.1e+3 Identity: 69.81% Query coverage: 17.49% Gaps: 0.00% Alignment: Query 38 AAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAU 90 ||| | | |||||| ||||||||||| | | | | | |||| | | |||| Sbjct 758 AAAUGUGCAACAUGGGAUGCAAAAUUACAACCAUCUGAGUUUGUUUUUCACAU 810 >> URS0000B53C9B_3981 Hevea brasiliensis miscellaneous RNA E-value: 4.1e+3 Identity: 61.84% Query coverage: 25.08% Gaps: 0.00% Alignment: Query 188 UUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUA 263 || ||||| ||| || | |||||| || || ||| || | | | ||| | | ||||||| ||| | Sbjct 60 UUCUCAGAAAUGCAUCCGAACAAAUGAUAUUGAGAAUGUGGGUCGAACAUCCCGACAUCAAACAUUCUUUGAGAUG 135 >> URS00019BE91C_9995 Marmota monax (woodchuck) non-coding RNA E-value: 4.1e+3 Identity: 67.92% Query coverage: 17.49% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU 217 |||||||| ||| |||||| | || || | |||| | | | |||||| Sbjct 17 GUGUGUGUGUGUGUGUGUGUGUGUAUACACACACACACACACACACAUGAACC 69 >> URS0000EC6955_5661 Leishmania donovani gene:LdHU3.32.2180(CDS-product:chromosomal_passen ger_protein_putative) E-value: 4.1e+3 Identity: 64.63% Query coverage: 26.40% Gaps: 2.44% Alignment: Query 116 GCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCU-CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU-UAUCAGA 195 ||| | ||| | ||| || | | ||||| ||| ||| | || || ||||| || | |||||| | || || || | Sbjct 1121 GCCGACUCUCAGCAGCGUUGAUCGCAUGGGCGUCUUCUUUUUUCCUUUAGAUGUGUUUAGGCGUGUGUGUGUGUGUAGCACA 1202 >> URS00028177E1_13191 Pectinophora gossypiella (Pink bollworm) uncharacterized LOC126366367 E-value: 4.2e+3 Identity: 56.70% Query coverage: 31.68% Gaps: 12.37% Alignment: Query 117 CCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA-UGCACAUUCG 205 ||| ||||| | | | | | | ||| || ||||| |||||||||||| | ||| | | ||| | | || || Sbjct 572 CCCCGACUCAAAAACA-----ACA------GUGUGUUAUAAGUUUGAAGUGUGUGUAUGUGUCUGUCUGUGGCAUCGUAGCUCCCAAACG 650 Query 206 GAUAAAU 212 ||| | Sbjct 651 GAUGAUC 657 >> URS00019B402E_9995 Marmota monax (woodchuck) non-coding RNA E-value: 4.2e+3 Identity: 52.15% Query coverage: 48.84% Gaps: 18.40% Alignment: Query 44 GUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAU-----AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUA 127 | |||||||| ||||| |||| | || || | | ||| | || | | | |||| | | | | | Sbjct 903 GCUCCAUGGG-----AAAUUC--AUCCCU-CAUCCUGUUCCAUGGCACACAGGAAAACCCUUGGGCUUUUUU-------CAAAAUUUCA 976 Query 128 CUGCGGUGCUAGAUUGGGCA-UCUCUU---------AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAU 191 | | | ||||||| ||| | ||| | |||||| || || ||| ||||||| |||| Sbjct 977 CCUCAAAGACAGAUUGGAGUCCCUCCUAUACUCUGCAAAGAUCUGAGGUAUGGGUGUGUGUGUGUGACAUUUAU 1050 >> URS00021EF741_52904 Scophthalmus maximus (turbot) lncRNA (ENSSMAG00000022696.1) E-value: 4.2e+3 Identity: 58.43% Query coverage: 29.37% Gaps: 17.98% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAU 252 |||||||| ||| |||||| | |||| | | |||| || || |||| | | || ||||||| | |||| Sbjct 1908 GUGUGUGUGUGUGUGUGUGUGUGUUAAAACAGGCACCAUC---UAUAUGAG-------------GUAAACCCCUCCGUCCCCUAACAU 1979 Query 253 U 253 Sbjct 1980 C 1980 >> URS000278EC46_74358 Podarcis lilfordi non-coding RNA E-value: 4.3e+3 Identity: 51.45% Query coverage: 39.60% Gaps: 19.57% Alignment: Query 106 UUUUAGAGAUGCCCAGACUCUA-------CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-----------GUGUGUGUA 173 |||||||||| ||| || || | | | | | || || | | | || | |||||||| Sbjct 16626 CUUUAGAGAUGAACAGGGAGUAUUUUUCCCUCCUGCACAAAA-UG--------UUCACAAUGUGUGUGUGUGUGUGUGUGUGUGUG 16702 Query 174 UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUG 225 ||| ||||| ||| |||| | ||| ||| || || | || || Sbjct 16703 UGUGUGUGUAAGGCUUAUUACGGAGGCAUAAGGACCAACAAAUUACUCCUUC 16754 >> URS00027B26C2_74358 Podarcis lilfordi non-coding RNA E-value: 4.3e+3 Identity: 51.45% Query coverage: 39.60% Gaps: 19.57% Alignment: Query 106 UUUUAGAGAUGCCCAGACUCUA-------CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-----------GUGUGUGUA 173 |||||||||| ||| || || | | | | | || || | | | || | |||||||| Sbjct 31769 CUUUAGAGAUGAACAGGGAGUAUUUUUCCCUCCUGCACAAAA-UG--------UUCACAAUGUGUGUGUGUGUGUGUGUGUGUGUG 31845 Query 174 UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUG 225 ||| ||||| ||| |||| | ||| ||| || || | || || Sbjct 31846 UGUGUGUGUAAGGCUUAUUACGGAGGCAUAAGGACCAACAAAUUACUCCUUC 31897 >> URS00023D9B21_4577 Zea mays (Z. mays) long non-coding RNA (ZMAY_LNC002077) E-value: 4.3e+3 Identity: 54.95% Query coverage: 35.64% Gaps: 2.70% Alignment: Query 79 UGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUC--UCUUAAAACUUUGAGG 165 || || | || |||| ||||| | | | | |||||| || | ||| | | |||| || | || || | || | Sbjct 4371 CACUGACCACUUUCUUUCCAGAAGACAUGAUGGUGUUGCCCACUCUAUGCUGUGAGGUGCACUUGGCAAUUGAUUUUGAAGCACAGACG 4459 Query 166 UGUGUGUAU-GUAUGUGUGAGG 186 | ||| | ||||||| Sbjct 4460 UCCUUGUUCUUGGUCUGUGAGG 4481 >> URS00023A0CCB_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC017455) E-value: 4.3e+3 Identity: 57.14% Query coverage: 33.99% Gaps: 2.86% Alignment: Query 8 GUGACAUCCAGUCCUA--CACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUC 96 | || | || || | || | |||||||||| | | |||| | | | | | | || || | ||| | | | ||||| | | Sbjct 292 GAGAUAGUGAGCUUUAAAAAAAAGCCUGAUGAAAACUACUAUCAUGCUUGGGGACACUUCAAUUCUCUUCUUUGGGAUUGUUCAUACCACC 382 Query 97 CAUAAGACCUUUUA 110 ||| | || | | Sbjct 383 AAUA-GUCCAAUGA 395 >> URS00009B033B_10090 Mus musculus long non-coding RNA NONMMUT062850.2 E-value: 4.4e+3 Identity: 57.58% Query coverage: 29.04% Gaps: 11.11% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCCCAGACUCUACU 129 ||| |||| | | ||| | || ||| ||||||| | |||||||||||| || | |||||| || ||| Sbjct 849 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUAGAGACUAUCCAUAAGUUCUGUGACUCUAGAGAAUCCUGACUAAUACA 938 Query 130 GCGGUGCUA 138 | || | | Sbjct 939 GAGGGGAAA 947 >> URS00009B9DF5_10090 Mus musculus long non-coding RNA NONMMUT062849.2 E-value: 4.4e+3 Identity: 57.58% Query coverage: 29.04% Gaps: 11.11% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCCCAGACUCUACU 129 ||| |||| | | ||| | || ||| ||||||| | |||||||||||| || | |||||| || ||| Sbjct 825 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUAGAGACUAUCCAUAAGUUCUGUGACUCUAGAGAAUCCUGACUAAUACA 914 Query 130 GCGGUGCUA 138 | || | | Sbjct 915 GAGGGGAAA 923 >> URS00009BD3FE_10090 Mus musculus long non-coding RNA NONMMUT125854.1 E-value: 4.4e+3 Identity: 57.58% Query coverage: 29.04% Gaps: 11.11% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCCCAGACUCUA 127 ||| |||| | | ||| | || ||| ||||||| | |||||||||||| || | |||||| || || Sbjct 937 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUAGAGACUAUCCAUAAGUUCUGUGACUCUAGAGAAUCCUGACUAAUA 1024 Query 128 CUGCGGUGCUA 138 | | || | | Sbjct 1025 CAGAGGGGAAA 1035 >> URS000075B981_10090 Mus musculus predicted gene, 16938 (Gm16938) E-value: 4.4e+3 Identity: 57.58% Query coverage: 29.04% Gaps: 11.11% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCCCAGACUCUACU 129 ||| |||| | | ||| | || ||| ||||||| | |||||||||||| || | |||||| || ||| Sbjct 822 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUAGAGACUAUCCAUAAGUUCUGUGACUCUAGAGAAUCCUGACUAAUACA 911 Query 130 GCGGUGCUA 138 | || | | Sbjct 912 GAGGGGAAA 920 >> URS00009C4C5C_10090 Mus musculus long non-coding RNA NONMMUT062847.2 E-value: 4.4e+3 Identity: 57.58% Query coverage: 29.04% Gaps: 11.11% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCCCAGACUCUACU 129 ||| |||| | | ||| | || ||| ||||||| | |||||||||||| || | |||||| || ||| Sbjct 822 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUAGAGACUAUCCAUAAGUUCUGUGACUCUAGAGAAUCCUGACUAAUACA 911 Query 130 GCGGUGCUA 138 | || | | Sbjct 912 GAGGGGAAA 920 >> URS000075D8C9_10090 Mus musculus predicted gene, 16938 (Gm16938) E-value: 4.4e+3 Identity: 57.58% Query coverage: 29.04% Gaps: 11.11% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCCCAGACUCUACU 129 ||| |||| | | ||| | || ||| ||||||| | |||||||||||| || | |||||| || ||| Sbjct 713 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUAGAGACUAUCCAUAAGUUCUGUGACUCUAGAGAAUCCUGACUAAUACA 802 Query 130 GCGGUGCUA 138 | || | | Sbjct 803 GAGGGGAAA 811 >> URS000075C0C1_10090 Mus musculus predicted gene, 16938 (Gm16938) E-value: 4.4e+3 Identity: 57.58% Query coverage: 29.04% Gaps: 11.11% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCCCAGACUCUACU 129 ||| |||| | | ||| | || ||| ||||||| | |||||||||||| || | |||||| || ||| Sbjct 849 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUAGAGACUAUCCAUAAGUUCUGUGACUCUAGAGAAUCCUGACUAAUACA 938 Query 130 GCGGUGCUA 138 | || | | Sbjct 939 GAGGGGAAA 947 >> URS00009C028B_10090 Mus musculus long non-coding RNA NONMMUT062848.2 E-value: 4.4e+3 Identity: 57.58% Query coverage: 29.04% Gaps: 11.11% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCCCAGACUCUACU 129 ||| |||| | | ||| | || ||| ||||||| | |||||||||||| || | |||||| || ||| Sbjct 713 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUAGAGACUAUCCAUAAGUUCUGUGACUCUAGAGAAUCCUGACUAAUACA 802 Query 130 GCGGUGCUA 138 | || | | Sbjct 803 GAGGGGAAA 811 >> URS00009BDFC8_10090 Mus musculus long non-coding RNA NONMMUT125855.1 E-value: 4.4e+3 Identity: 57.58% Query coverage: 29.04% Gaps: 11.11% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCCCAGACUCUACU 129 ||| |||| | | ||| | || ||| ||||||| | |||||||||||| || | |||||| || ||| Sbjct 851 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUAGAGACUAUCCAUAAGUUCUGUGACUCUAGAGAAUCCUGACUAAUACA 940 Query 130 GCGGUGCUA 138 | || | | Sbjct 941 GAGGGGAAA 949 >> URS0000759F40_10090 Mus musculus predicted gene, 16938 (Gm16938) E-value: 4.4e+3 Identity: 57.58% Query coverage: 29.04% Gaps: 11.11% Alignment: Query 51 GGGUUGCAAAAUUACU---AUCCUUUAA---UUUUGCUAUAUACAUACUAUCCAUAAGACCU-----UUUAGAGAUGCCCAGACUCUACU 129 ||| |||| | | ||| | || ||| ||||||| | |||||||||||| || | |||||| || ||| Sbjct 825 GGGCUGCAGACUGUAAGUCAUCAAUAAAUUCCUUUACUAUAUAGAGACUAUCCAUAAGUUCUGUGACUCUAGAGAAUCCUGACUAAUACA 914 Query 130 GCGGUGCUA 138 | || | | Sbjct 915 GAGGGGAAA 923 >> URS0002732102_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 4.4e+3 Identity: 56.30% Query coverage: 37.62% Gaps: 9.24% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGU-----GUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 || |||||| || || || || || | ||| || || || |||| |||| | |||||||| | || Sbjct 12979 AUGUGAGGUGCUGGA---GGUAUAUCA---AAGGCAGUGGUCAGUAUGAAGUGUGGAUGUUGACAGGUUUUGAGAUGCACUGUAGG 13058 Query 207 AUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUC 239 | ||| | || | ||||| || | || | Sbjct 13059 AAAAACUGUCCUCAGCUUGUAUUUAUCUGCUGC 13091 >> URS0000A84B87_13735 Pelodiscus sinensis (Chinese softshell turtle) miRNA (ENSPSIG00000019538.1) E-value: 4.4e+3 Identity: 68.18% Query coverage: 14.52% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 |||||||||||| |||||| | || || | |||| | | Sbjct 48 UGUGUGUGUAUGUGUGUGUGUGUGUAUACACACACACACACACA 91 >> URS0001998D71_113540 Scleropages formosus (Asian bonytongue) lncRNA (ENSSFOG00015026777.1) E-value: 4.4e+3 Identity: 53.33% Query coverage: 32.01% Gaps: 9.52% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU--------UAUCAGAUGCACAUUCGG 206 | | || | || | | ||||||| | | | |||||||| ||| |||||| | || | | | ||| | Sbjct 837 AAUCGAGGAGUUACACAGUGCAUCUCAUGAUGUGUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCGCACGCUGCAGAACACAUG- 924 Query 207 AUAAAUGAACUUCUGA 222 | |||||||| | Sbjct 925 -AAGGUGAACUUCCGC 939 >> URS00023F5A10_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC000750) E-value: 4.4e+3 Identity: 51.32% Query coverage: 46.86% Gaps: 14.47% Alignment: Query 36 GAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAA----------GACCUUUUAGA 112 ||| | ||||||| || || | |||||| | | ||| |||||| ||| || | || ||| | | Sbjct 16234 CAAACCAAGUUCCACAUGUAGCUACCCUACUAUGCAUGAAUGGAUAUAUAUAUAUAUGCUCAAAAAUAGAGAAACAGACAUAGAGGG 16320 Query 113 GAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUA 177 || || | || | | | | ||| | | | || |||| ||||| |||| Sbjct 16321 GAA--------UC--CAACGAUUCCGG--CGUGCACCCCCCACCUCUAUGAGUCGUGUGGGUGUA 16373 >> URS000259B2E8_61616 Pelobates cultripes (western spadefoot toad) non-coding RNA E-value: 4.4e+3 Identity: 80.39% Query coverage: 16.50% Gaps: 1.96% Alignment: Query 62 UUACUAUCCUUUAAUUUUGCUAUAUACAUACUAU-CCAUAAGACCUUUUAG 111 || ||||||||| ||| |||||||||||||| ||||||||||||| Sbjct 297 UUUUUAUCCUUUACUUUGUGUAUAUACAUACUAUACCAUAAGACCUUUCUC 347 >> URS00025EE548_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000094164.1) E-value: 4.4e+3 Identity: 53.62% Query coverage: 44.22% Gaps: 9.42% Alignment: Query 141 UUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA----AAUGAACUUCUGAUUG 225 ||| ||||||| | | | | |||||||| ||| ||||||| | | |||| | ||| | ||| | |||| | Sbjct 2919 UUGAGCAUCUCAUGAGUGUGU---GUGUGUGUGUGUGUGUGUGAAGCACACAUGAUGAUGUUCAAGAUGAUGUACAGAAUUGAUGAUGG 3004 Query 226 UAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCA 274 ||| | | ||||| | || || | ||| | || Sbjct 3005 AAAUCCC------UUGCCCUGUAAUAUCACUUGUCCUGGUCUCCUUCCA 3047 >> URS00023AD4D3_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC000732) E-value: 4.4e+3 Identity: 51.32% Query coverage: 46.86% Gaps: 14.47% Alignment: Query 36 GAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAA----------GACCUUUUA 110 ||| | ||||||| || || | |||||| | | ||| |||||| ||| || | || ||| | Sbjct 103089 CAAACCAAGUUCCACAUGUAGCUACCCUACUAUGCAUGAAUGGAUAUAUAUAUAUAUGCUCAAAAAUAGAGAAACAGACAUAGAG 103173 Query 111 GAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUA 177 | || || | || | | | | ||| | | | || |||| ||||| |||| Sbjct 103174 GGGAA--------UC--CAACGAUUCCGG--CGUGCACCCCCCACCUCUAUGAGUCGUGUGGGUGUA 103228 >> URS0000BC5DCF_10089 Mus caroli (Ryukyu mouse) lncRNA (MGP_CAROLIEiJ_G0004771.1) E-value: 4.5e+3 Identity: 52.70% Query coverage: 46.53% Gaps: 17.57% Alignment: Query 52 GGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAU 141 |||| || | || | | | || | | |||||||||| |||| | |||| | | | | | || | | Sbjct 590 GGUUCCAUGAGCACCAGGCAUGAACAU-GGCAUAUACAUACAAUCCCUGU------------AUGCAAGGGAUUUCUCCCAGCGCAACA- 665 Query 142 UGGGCAUCUCUUAAAACUUUGAG-------GUGUGUGUAUGUAUGUGUGAGGGUUAUC 192 ||||| | | | |||| |||||||| ||| |||||| | |||| Sbjct 666 -----AUCUCAUUAGUCAUUGACAGUGUGUGUGUGUGUUUGUGUGUGUGUGCUCUAUC 718 >> URS00024004E6_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC043843) E-value: 4.5e+3 Identity: 53.29% Query coverage: 46.86% Gaps: 14.47% Alignment: Query 36 GAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAA----------GACCUUUUAGAGAUG 116 ||| | ||||||| || || | |||||| | | ||| |||||| ||| || | || ||| | |||| Sbjct 220 CAAACCAAGUUCCACAUGUAGCUACCCUACUAUGCAUGAAUGGAUAUAUAUAUAUAUGCUCAAAAAUAGAGAAACAGACAU---AGAGGG- 306 Query 117 CCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUA 177 || || | || | | | | ||| | | | || |||| ||||| |||| Sbjct 307 ----GAAUC--CAACGAUUCCGG--CGUGCACCCCCCACCUCUAUGAGUCGUGUGGGUGUA 359 >> URS00023545A3_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC000563) E-value: 4.5e+3 Identity: 62.65% Query coverage: 25.41% Gaps: 8.43% Alignment: Query 34 AUGAAAACGAGUUCCAUGGGUUGCAAA-----AUUACUAU-CCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUA 110 || || | ||| || | ||| | | ||| || || ||||||||||| || || ||| | || | | |||| || Sbjct 80155 CGGAGAAGGCGUUUCAAGAUUUGAAGACAGCAUUUAUUACAGCUCUAAUUUUGCUACAUCCAGACUUUACAAAGG-CCUUCUA 80236 >> URS00027FD343_9796 Equus caballus (horse) lncRNA (ENSECAG00000053374.1) E-value: 4.5e+3 Identity: 60.00% Query coverage: 25.41% Gaps: 3.75% Alignment: Query 112 AGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCA---UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 || |||||| | || |||| || | | |||| ||||| | |||| ||| ||| ||| |||||| Sbjct 1133 UGAACCCCAGAACUGAGAGCAGUGCCUGACAGAGUCAGUGCUCUGAAAACACCGGGGUGAGUGAAUGAAUGAGUGAGGAA 1212 >> URS00024197CD_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC004171) E-value: 4.5e+3 Identity: 53.08% Query coverage: 42.90% Gaps: 6.92% Alignment: Query 98 AUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 |||| || | | | | | | | ||| || || ||| | | || | | ||| ||||| |||||| ||||| Sbjct 62773 AUAACACAGAUCCGUAAAU--AACAGUUCAAUGCCAUGUCUGAAUGGCCCUUGCUGAUCAUUUUUGUGUGUGCAUAUGUACGUGUGU 62857 Query 185 GGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUA 227 || || || || || || ||| | ||||| Sbjct 62858 AACUUGACA-------CUUGGGGAAAGCGAUCUUAUUUUUGUA 62893 >> URS0000E9A72B_9606 Homo sapiens (human) HSALNT0070150 E-value: 4.6e+3 Identity: 52.59% Query coverage: 44.55% Gaps: 8.89% Alignment: Query 85 AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUA 173 | || |||||| | ||| |||| | | || | | ||| || || ||| | | | || |||||| Sbjct 1886 AGUCAAACUAUCAUCAUGACUGCCUAGAUCUUCAACAGCU------CAGAGCU-GACAAUGCUAUUCUCAGUUCACAGUGGCGUGUGUG 1967 Query 174 UGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUC 219 || |||||||| || | ||||| | | | | | |||| Sbjct 1968 CGUGUGUGUGAGUGUAA-----UGCACUCUUGUGUUCAGGCACUUG 2008 >> URS0001969613_9823 Sus scrofa (pig) lncRNA (ENSSSCG00040034876.1) E-value: 4.6e+3 Identity: 54.17% Query coverage: 43.89% Gaps: 13.89% Alignment: Query 54 UUGCAAAAUUACUAUCCUU---UAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGC----CCAGACUC-UACUGCGGU 134 || |||| || || || ||||| ||||||| |||| |||||||| | || | | | | | | Sbjct 984 CUGUAAAACCACGUCCCAAGUAUAUACAUGCUAAAUACAUAAG-----GAAGA--GAUUAGAGAUACAUGAUCAAAUACAUGUUUCAAU 1065 Query 135 GCU---AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 ||| || ||| | | |||| ||||||||| ||| |||||| | Sbjct 1066 GCUCAGAGCCAGGGUUCCCCCCCC--CUUUUUGGUGUGUGUGUGUGUGUGUGUGU 1118 >> URS0000B21E7C_10116 Rattus norvegicus long non-coding RNA NONRATT008614.2 E-value: 4.6e+3 Identity: 66.67% Query coverage: 20.79% Gaps: 3.17% Alignment: Query 62 UUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACU 124 |||| ||| | || ||| || || ||||| | |||||| || ||||| | || || | Sbjct 567 UUACGAUCU-AUUAUCAUGCCAUCUAGUUACUAGUCGUAAGACUUUAUAGAGGUACCAAGU-U 627 >> URS00023B175B_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC004952) E-value: 4.6e+3 Identity: 61.04% Query coverage: 24.75% Gaps: 2.60% Alignment: Query 90 UACUAUCCA--UAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG 164 ||| |||| || | |||||||| || | | | ||||| |||| | |||||| | ||| |||| Sbjct 16049 GACUUUCCACUUACUGCUUUUUAGAGCAGCUUAAAAACAACUGCUGUGCAGCACAGGGCAUGAGCUGCAACAGUGAG 16125 >> URS000240F4B5_3888 Pisum sativum (pea) long non-coding RNA (PSAT_LNC029606) E-value: 4.6e+3 Identity: 62.30% Query coverage: 20.13% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 | | |||| || |||| ||| || || || ||||||||| ||| | ||| | Sbjct 44623 GCAAUAUGUACUUAGGUGUUAGGAUUUACAAAUCUACAUUCGGAAAAAGCGUCAUCUAUCU 44683 >> URS00023472AE_9606 Homo sapiens (human) HSALNT0240028 E-value: 4.7e+3 Identity: 64.15% Query coverage: 15.51% Gaps: 11.32% Alignment: Query 160 UUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAU------CAGAUGCACAUUCGG 206 | ||||| || |||||||||| | | | ||||||||||| | | Sbjct 462 UCACUGUGUGCGUGUGUAUGUGUGUGUGCUCACACGCCCAGAUGCACAUGCAG 514 >> URS00023FC4BD_3046 Dunaliella salina (D. salina) long non-coding RNA (DSAL_LNC000397) E-value: 4.7e+3 Identity: 57.28% Query coverage: 33.99% Gaps: 1.94% Alignment: Query 61 AUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUC 149 | || |||| | || ||| | ||| ||||||| ||||| ||||||| ||| | | | || | |||| Sbjct 9621 GAUGGAAUGCUUUGCGUCUGAUAUC-CCUGACUGGCCAUAAGGCCUUUGAGAGAUGGUGAGAAGUGAGUCU-CUUCUGACAUCUGCAUG 9707 Query 150 UCUUAAAACUUUGA 163 ||||| || | | | Sbjct 9708 UCUUAGAAAUCUAA 9721 >> URS0000CCF2A3_10116 Rattus norvegicus uncharacterized LOC102551514 E-value: 4.7e+3 Identity: 57.14% Query coverage: 29.04% Gaps: 7.69% Alignment: Query 118 CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG---GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 || || | | || || | ||| || ||| |||| | | |||||||| ||| |||||| | || || || | Sbjct 1297 CCGGAGACAAGAGCUCAGCCACCAUGGCCACCUCCUAAAUAGAAGGGAUGGUGUGUGUGUGUGUGUGUGUGUGUG----UGUGUACGU 1380 Query 203 UCG 205 || Sbjct 1381 ACG 1383 >> URS00025E51DA_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000099651.1) E-value: 4.7e+3 Identity: 50.31% Query coverage: 49.83% Gaps: 19.50% Alignment: Query 37 AAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUU--------GCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCC 119 |||||||||| | | | ||| | ||| | | || || || || | | || | || | || | |||| || Sbjct 731 AAAACGAGUUUUAAUGACUCCAACCUAACUGUAUGUAAACUUCCGACUUCAACUGUACAUACACAACACACACACCCGUACAGAGU---CC 818 Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 | ||| ||| | | | | ||||||||||| ||| |||| ||| | Sbjct 819 UG------AUGC------AGAAUACAC---UGU-----UCCAGAGGUGUGUGUGUGUGUGUGAGAGAG 866 >> URS00023E3DA9_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC003281) E-value: 4.7e+3 Identity: 55.14% Query coverage: 34.98% Gaps: 15.89% Alignment: Query 144 GGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUU 230 ||||| ||| |||| || ||||||| ||| | ||||| |||| || ||||| | ||||| Sbjct 21971 AGCAUCCUCAAAAUCUUUUAGAUGUGUGU----------AAGGUCUCUCAGACUCACAACCGUUAAAAUGUGGCAAAGCUUGUA--- 22044 Query 231 CUAGCCUUC-CGUCCUGUGA 249 || ||| || ||| || Sbjct 22045 ---GCAUUCCCGAUCUGAGA 22061 >> URS0001990B70_59729 Taeniopygia guttata (zebra finch) lncRNA (ENSTGUG00000021077.1) E-value: 4.7e+3 Identity: 55.08% Query coverage: 37.95% Gaps: 5.93% Alignment: Query 167 GUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCU---GAUUGUAAUUCUAGCCUUCCGUCCUGUGACA 251 |||||| ||| |||||| | || | |||| || | |+| | || | | |+ |||++ +| | |||| ||| Sbjct 5539 GUGUGUGUGUGUGUGUGUGUGUAUGUACUUGCAUAUACACACACAAA-ACAUGUAUAUACACUAACCACAUUUAAACAGCCUGGCACA 5625 Query 252 UUCUGUGAUGUAGUCGUUAUUCAGUGAUAU 281 || |||||| | || |||| ||| | Sbjct 5626 UUUUGUGAUUUGGU---GAUUCUCUGAACU 5652 >> URS000233A171_9606 Homo sapiens (human) HSALNT0312162 E-value: 4.8e+3 Identity: 61.62% Query coverage: 30.36% Gaps: 9.09% Alignment: Query 111 GAGAUGCCCAGACUCUACUGCGGUGC-UAGAUUGGGCAUCUC------UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUA 190 | |||||| ||||| ||| | | ||| | | || || || | || ||||||||| ||| |||||| | || Sbjct 41427 AACAUGCCCUUACUCUCCUGUAAUAAACACAUUUUUCUUUUCUUGUUGUUUAAGCCAUGGGGUGUGUGUGUGUCUGUGUGUGCGUGC 41513 Query 191 UCAGAUGCACAU 202 ||| |||||| Sbjct 41514 UCAA--GCACAU 41523 >> URS00026F51D8_1709941 fungal sp. partial contains small subunit ribosomal RNA, internal transcribed spacer 1, and 5.8S ribosomal RNA E-value: 4.8e+3 Identity: 53.75% Query coverage: 52.15% Gaps: 5.63% Alignment: Query 78 UUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACU--UUGA 163 || ||||| || | || || | | || | || | ||| | | ||| ||| || | || ||| Sbjct 64 UUUUAUUAUACCAACCAACCGCGUGAUUUAAUCGAAUUAAAAUUACCCGACUUGAGAGUGAGAGAACCUGUCUAUUUACACGGAGUGA 151 Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGC 235 | |||||| ||||||||||| | ||| ||| | ||| || | || | ||||||| || | Sbjct 152 UGAGUGUGUUUGUAUGUGUGAAAGCAUAUAGAAGCAUA--CGG-----UGUAUUUAGGCUUGUAAUGCUUGA 216 >> URS0000B28396_10116 Rattus norvegicus long non-coding RNA NONRATT020877.2 E-value: 4.8e+3 Identity: 59.04% Query coverage: 26.07% Gaps: 4.82% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU----GUAAUUCUAGCCUUCCGUC 243 |||||||| ||| ||||| | || || |||||| || || ||| | | ||| ||| |||| || | Sbjct 768 GUGUGUGUGUGUGUGUGUAUGUGUCUGCAUGAGCACAUACGAGUACAUGUGCAUGUGACAAAGGACAAUAUCAGCCCUCAACC 850 >> URS0002354BF5_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC004595) E-value: 4.9e+3 Identity: 61.86% Query coverage: 28.38% Gaps: 11.34% Alignment: Query 55 UGCAAAAUUACUAUCCUUUAAUUUUGCUAU---AUACAUACUAUCCAUAAGACCUUUUAGAGAUGC----CCA----GACUCUACUGCG 132 | ||||||| |||||||||| || ||| || ||| | ||| | ||| || ||| ||| ||| |||||| | | Sbjct 4560 UACAAAAUUCCUAUCCUUUAUGAUUCCUAGAAAAUUCAUGUAAACCAAAGGACUCCUUCGAGUUGCAUGCCCACUUGAACUCUAUAGGG 4648 Query 133 GUGCUAGA 140 | |||| Sbjct 4649 UUAGUAGA 4656 >> URS00009B33FD_10090 Mus musculus long non-coding RNA NONMMUT041808.2 E-value: 5e+3 Identity: 58.06% Query coverage: 29.04% Gaps: 8.60% Alignment: Query 130 GCGGUGCUAGA---UUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU--AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGA 214 | | |||| |||||| | | ||| || | ||||| ||| ||| || | || |||||||||| || | ||| Sbjct 642 GAAGAACUAGGUACUUGGGCUUUAUU---UACUCUGGUGAGUGUGCAUGCCCAUGCAUGUGAGUGUGCAGAUGCACACACGUGCACAUGU 728 Query 215 ACU 217 || Sbjct 729 ACA 731 >> URS0000B6A06D_3981 Hevea brasiliensis miscellaneous RNA E-value: 5e+3 Identity: 60.71% Query coverage: 27.72% Gaps: 3.57% Alignment: Query 31 UUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGA 114 +||| ||||||| ||| ||| ||| | |||| || ||| | | +| |||| || ||| ||+| || |+| | || Sbjct 132 CUGAGGAAAACGGUUUCAAUGAAGUGCCACAUUAGGUUCAUUUCAG---GUCAAAUACCUAAUAUGCACAGGAUUUCUAUGGGA 212 >> URS00026287D1_210409 Portunus trituberculatus (Swimming crab) uncharacterized LOC123499742, transcript variant X3 E-value: 5e+3 Identity: 58.41% Query coverage: 35.97% Gaps: 6.19% Alignment: Query 127 ACUGCGGUGCUAGAUUGGGCAU---CUCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 | || || | ||| || | ||| | || | | | || | |||||||| ||| ||||||| ||| || | || || || Sbjct 688 AGUGAGGCGUUAGGUUUGUCAUGGCCCCUCUACAGUGUGUGUGUGUGUGUGUGUGUGUGUGAAGGUCAUGUCACGCCUGAAAGGCGAAC 776 Query 212 UGAACUUCUGAUUGUAAUUCUAGC 235 | ||| ||| | | ||| Sbjct 777 CCA---CCUGCGUGUCCUGCCAGC 797 >> URS0000E9D2BE_9606 Homo sapiens (human) HSALNT0154625 E-value: 5.1e+3 Identity: 59.72% Query coverage: 22.44% Gaps: 5.56% Alignment: Query 146 CAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 || |+|+ || | | |||||||| ||| |||||| | ||||+||||| | | || ||| | Sbjct 2925 CAGCCCCAAAGAUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUUACCAGAUCAAUGAACUGAGAAAAG 2996 >> URS0000E967F2_9606 Homo sapiens (human) HSALNT0154626 E-value: 5.1e+3 Identity: 59.72% Query coverage: 22.44% Gaps: 5.56% Alignment: Query 146 CAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 || |+|+ || | | |||||||| ||| |||||| | ||||+||||| | | || ||| | Sbjct 2925 CAGCCCCAAAGAUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUUACCAGAUCAAUGAACUGAGAAAAG 2996 >> URS00008B3365_9606 Homo sapiens (human) non-protein coding LINC00161:5 E-value: 5.1e+3 Identity: 63.24% Query coverage: 22.11% Gaps: 7.35% Alignment: Query 155 AAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC-GGAUAAAUGAACUUCUG 221 || || | || ||| |||||| ||| ||||||| |||| | ||||||| ||||| Sbjct 86 AAUGAACCAGCUAUGGAAUUGUCUGUGUGUGGGCAUUCAGAUGGACAUACCGGAUAAA----AUUCUG 149 >> URS00009C3808_10090 Mus musculus long non-coding RNA NONMMUT077118.1 E-value: 5.1e+3 Identity: 60.95% Query coverage: 31.68% Gaps: 8.57% Alignment: Query 116 GCCCAGA---CUCUACUGCGGUGCUAGAUUGGGCAUCUC--UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUA----UCAG 194 ||||||| || | | | || || | | | | |||| | || || | ||||||||| | |||||| | || ||| Sbjct 7033 GCCCAGAAGGCUUUUCGGGGGAGCCACAAUCAGUUUCUCAGUCUCUGCUGUGUGUUGUGUGUAUUUGUGUGUGUUGUAUAUGUGUCAC 7120 Query 195 AUGCACAUUCGGAUAAA 211 ||||| || | ||| | Sbjct 7121 AUGCAUAUACACAUAGA 7137 >> URS00009B0348_10090 Mus musculus long non-coding RNA NONMMUT077125.1 E-value: 5.1e+3 Identity: 60.95% Query coverage: 31.68% Gaps: 8.57% Alignment: Query 116 GCCCAGA---CUCUACUGCGGUGCUAGAUUGGGCAUCUC--UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUA----UCAG 194 ||||||| || | | | || || | | | | |||| | || || | ||||||||| | |||||| | || ||| Sbjct 1051 GCCCAGAAGGCUUUUCGGGGGAGCCACAAUCAGUUUCUCAGUCUCUGCUGUGUGUUGUGUGUAUUUGUGUGUGUUGUAUAUGUGUCAC 1138 Query 195 AUGCACAUUCGGAUAAA 211 ||||| || | ||| | Sbjct 1139 AUGCAUAUACACAUAGA 1155 >> URS00027F2532_9793 Equus asinus (ass) lncRNA (ENSEASG00005025206.1) E-value: 5.1e+3 Identity: 54.70% Query coverage: 37.62% Gaps: 2.56% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCAC---AUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAU 252 | || || ||||| || | | |||||| | | ||| | ||| | ||||| || ||| | | | |||||| Sbjct 340 GGGUAUGGAUGUAGGUUAAAAAUCUUCCAGAUGAUUCUAAGAAGUAUACCAGGACUGAAUACUGUAACCCUUGCCCUACUUACUGUGAACA 430 Query 253 UCUGUGAUGUAGUCGUUAUUCAGUGA 278 |||| ||| | ||| ||| | Sbjct 431 GCUGUAAUGAGACUGCAAUUGAGUCA 456 >> URS00023E3DB7_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC016668) E-value: 5.1e+3 Identity: 53.16% Query coverage: 47.52% Gaps: 16.46% Alignment: Query 34 AUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUAC-UAUCCAUA-------------AGAC 104 || ||| | ||||||| || || | |||||| | | ||| |||||| ||| ||| | | |||| Sbjct 185942 AUCAAACCAAGUUCCACAUGUAGCUACCCUACUAUGCAUGAAUGGGUAUAUAUAUAUAUAUAUGCUCAAAAAUAGAGAAAUAGAC 186026 Query 105 CUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUA 177 | |||| || || | || | | | | ||| | | | || |||| ||||| |||| Sbjct 186027 AU---AGAGGG-----GAAUC--CAACGAUUCCGG--CGUGCACCCCCCACCUCUGUGAGUCGUGUGGGUGUA 186087 >> URS00009BC11E_10090 Mus musculus long non-coding RNA NONMMUT041237.2 E-value: 5.2e+3 Identity: 63.79% Query coverage: 19.14% Gaps: 0.00% Alignment: Query 155 AAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 | | ||| |||||||| ||| |||||| | || |||||| | | | | || Sbjct 203 ACAGUUUAGUGUGUGUGUGUGUGUGUGUGUGCACGCGCACAUGCACCAUAGCACACAU 260 >> URS00009B2C92_10090 Mus musculus long non-coding RNA NONMMUT070862.2 E-value: 5.2e+3 Identity: 56.60% Query coverage: 32.01% Gaps: 8.49% Alignment: Query 137 UAGAUUGGGCAUCUCUUAAAACUUUGAG-----GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU-- 217 ||| | || | | |||||| |||||| | ||| || || | || ||| ||||| | | |||| ||| Sbjct 2756 AAGAGAGCUCAGCCCAGCUGUGUUUGAGUGAAUGUGUGUAUGUGUUUGCAUGUGUGUGCUCAUGUGCACUGUGGUGUAAAAUGACUGU 2843 Query 218 --UCUGAUUGUAAUUCUA 233 |||| |||||| || Sbjct 2844 UAUCUGGUUGUAACUCAG 2861 >> URS00023762A4_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC014681) E-value: 5.2e+3 Identity: 58.41% Query coverage: 37.29% Gaps: 3.54% Alignment: Query 55 UGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGG 145 |||||| || |||| || | |||| | | | |||| | | | | || |||| || | ||| | | ||||| Sbjct 684 AGCAAAAAUAGUAUCUCUUCUAUAUGCUCUCGA--UU-CUUCCACAUGUUUUCGUCGACUGUAGCAGAGUCAAUUGCCCUAUUUCUUUGGG 771 Query 146 CAUCUCUUAAAACUUUGAGGUG 167 || ||||| || ||| ||| || Sbjct 772 CAACUCUUUAACCUUGGAG-UG 792 >> URS0001966F30_9823 Sus scrofa (pig) lncRNA (ENSSSCG00065000488.1) E-value: 5.2e+3 Identity: 52.78% Query coverage: 41.58% Gaps: 14.58% Alignment: Query 60 AAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUA 138 || | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | | Sbjct 976 AACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCA 1064 Query 139 GAUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUGAG 185 | || || |||| |||||| | ||||| |||| ||| |||||| | Sbjct 1065 GCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUGUG 1116 >> URS00019648C1_9823 Sus scrofa (pig) lncRNA (ENSSSCG00065000488.1) E-value: 5.2e+3 Identity: 52.78% Query coverage: 41.58% Gaps: 14.58% Alignment: Query 60 AAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAGA 140 || | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 476 AACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAGC 566 Query 141 UUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUGAG 185 || || |||| |||||| | ||||| |||| ||| |||||| | Sbjct 567 AAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUGUG 616 >> URS000240A1B4_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC014678) E-value: 5.2e+3 Identity: 58.41% Query coverage: 37.29% Gaps: 3.54% Alignment: Query 55 UGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAU 141 |||||| || |||| || | |||| | | | |||| | | | | || |||| || | ||| | | | Sbjct 58804 AGCAAAAAUAGUAUCUCUUCUAUAUGCUCUCGA--UU-CUUCCACAUGUUUUCGUCGACUGUAGCAGAGUCAAUUGCCCUAUUUCUU 58887 Query 142 UGGGCAUCUCUUAAAACUUUGAGGUG 167 |||||| ||||| || ||| ||| || Sbjct 58888 UGGGCAACUCUUUAACCUUGGAG-UG 58912 >> URS0002421D29_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC014679) E-value: 5.2e+3 Identity: 58.41% Query coverage: 37.29% Gaps: 3.54% Alignment: Query 55 UGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAU 141 |||||| || |||| || | |||| | | | |||| | | | | || |||| || | ||| | | | Sbjct 58286 AGCAAAAAUAGUAUCUCUUCUAUAUGCUCUCGA--UU-CUUCCACAUGUUUUCGUCGACUGUAGCAGAGUCAAUUGCCCUAUUUCUU 58369 Query 142 UGGGCAUCUCUUAAAACUUUGAGGUG 167 |||||| ||||| || ||| ||| || Sbjct 58370 UGGGCAACUCUUUAACCUUGGAG-UG 58394 >> URS000195EF11_9823 Sus scrofa (pig) lncRNA (ENSSSCG00065000488.1) E-value: 5.2e+3 Identity: 52.78% Query coverage: 41.58% Gaps: 14.58% Alignment: Query 60 AAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAGA 140 || | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 559 AACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAGC 649 Query 141 UUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUGAG 185 || || |||| |||||| | ||||| |||| ||| |||||| | Sbjct 650 AAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUGUG 699 >> URS00022B5508_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00000051948.1) E-value: 5.3e+3 Identity: 64.41% Query coverage: 18.81% Gaps: 3.39% Alignment: Query 163 AGGUGUGUGUAUGUAU--GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUC 219 ||||||||| ||| | ||||| | || || |+ ||||+ | |||| ||| || Sbjct 1169 GGGUGUGUGUGUGUGUGUGUGUGUGUGUAUACACACACACACGCAUAUAAUGGAAUAUC 1227 >> URS0000CCF1EB_10116 Rattus norvegicus uncharacterized LOC102554009 E-value: 5.3e+3 Identity: 61.18% Query coverage: 27.06% Gaps: 4.71% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAU---UGUAAUUCUAGCCUUCCGUCCUG 246 |||||||| ||| |||||| | || || |||| | | | | || ||||| || |||||||| | | || | Sbjct 4010 GUGUGUGUGUGUGUGUGUGUGUGUAUGCACGUGCAUACAUG-UCACAAGAGUCACUGAUCCCCCUAUAUCUAGCCUCCAGCCCAG 4093 >> URS0001A13CDB_9995 Marmota monax (woodchuck) non-coding RNA E-value: 5.3e+3 Identity: 60.36% Query coverage: 36.63% Gaps: 6.31% Alignment: Query 129 UGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUC 219 |||||| |||| | |||| || | | || ||||| | || | ||| | || | ||| || || | || ||| || Sbjct 297 UGCGGUCCUAGCCU---CAUCCUAUAGCAGGUGGACAGGUGUGGAAUGGUGAGGGAGAG---UCGGCAGCAGGUUUGGCUUUAUCAACCUC 381 Query 220 UGAUUGUAAUUCUAGCCUUC 239 |||||| ||| |||| || Sbjct 382 UGAUUGACAUU-UAGCUUUU 400 >> URS000282BCCD_34632 Rhipicephalus sanguineus (Brown dog tick) fasciclin-2 E-value: 5.3e+3 Identity: 45.36% Query coverage: 60.40% Gaps: 21.31% Alignment: Query 40 ACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUA 127 ||||| ||| | ||| ||| | || || | | | | || | | | | || || | | Sbjct 5571 ACGAGCUCCGUAGGUCGCAUAUUUGCUGUGUGUACUUGGCACCAUGUGCCGAAUGGCCGUAGUAAC---------------------- 5636 Query 128 CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAA 215 | || ||| | | | || | | ||||||| ||||||| | ||| | || |||| | || Sbjct 5637 ----AAGUUUUGAAUGGUUGUGUGAUGAACCAUGCAGGUGUGCGUAUGUAAGCGUGCAGCCCAUAAGAUCAAA-------------AA 5707 Query 216 CUUCUGA 222 |||||| Sbjct 5708 CUUCUGG 5714 >> URS000195D35A_56716 Cottoperca gobio (channel bull blenny) lncRNA (ENSCGOG00000006999.1) E-value: 5.3e+3 Identity: 52.83% Query coverage: 31.02% Gaps: 18.87% Alignment: Query 108 UUAGAGAUGCCCAGACUC--UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG----------GUGUGUGUAUGUAUGUGUG 183 ||||| ||| ||| | |||| ||| | |||| | | || |||||||| ||| |||||| Sbjct 1215 ACAGAGAAGCCGCAGCUCCGUCCUGCAGUGAUG------ACAUCAUGCACA--CACAAGGUGUGUGUGUGUGUGUGUGUGUGUGUGUG 1294 Query 184 AGGGUUAUCAGAUGCACA 201 | | ||| ||| || | Sbjct 1295 UGUGAUAUAAGAAGCCCG 1312 >> URS0002186CD3_8019 Oncorhynchus kisutch (coho salmon) lncRNA (ENSOKIG00005004246.1) E-value: 5.3e+3 Identity: 54.46% Query coverage: 32.67% Gaps: 6.93% Alignment: Query 87 ACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGA--UUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUG 175 || | | ||| | || | | | | || ||| ||| || | | || |||| | | | || |||||||| || Sbjct 495 CCACAGCUUUUUCAAGCCAUUCUUGUAUU-----GCCUUUACAGCGCUGACACAGCAGAGGAAUCUUUCCAUAAACAGAUGUGUGUGUGUG 580 Query 176 UAUGUGUGAG 185 | |||||| | Sbjct 581 UGUGUGUGUG 590 >> URS00025EC7EA_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000107708.1) E-value: 5.3e+3 Identity: 60.98% Query coverage: 26.07% Gaps: 12.20% Alignment: Query 128 CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGU---GUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 ||| | | | ||| |||| | ||| | ||||||| || | |||||| ||| | || ||| ||||| || Sbjct 3424 UUGCAGAACCACAUUUGGCAGCGAUUACAGCUUUGAGUCGUCUUGGGUAUGUCUGUAUCAGCUUUA-------CACAUCUGG 3498 >> URS0000CD0153_10116 Rattus norvegicus uncharacterized LOC102554009 E-value: 5.3e+3 Identity: 61.18% Query coverage: 27.06% Gaps: 4.71% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAU---UGUAAUUCUAGCCUUCCGUCCUG 246 |||||||| ||| |||||| | || || |||| | | | | || ||||| || |||||||| | | || | Sbjct 4763 GUGUGUGUGUGUGUGUGUGUGUGUAUGCACGUGCAUACAUG-UCACAAGAGUCACUGAUCCCCCUAUAUCUAGCCUCCAGCCCAG 4846 >> URS0000AE93C8_10090 Mus musculus (house mouse) ilncRNA-EC61 E-value: 5.4e+3 Identity: 62.65% Query coverage: 26.73% Gaps: 7.23% Alignment: Query 103 ACCUUUUAGAGAUGC--CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUG 183 |||| | | ||| |||| || || | | ||| | || || |||||| | | | ||||||| ||| |||||| Sbjct 2175 ACCUGUAGGCCCUGCUGCCAGCAUC---UGAUGCCCAAGAAUCUCCAACUUUUAAAAGUCCGUG-UGUGUGUGUGUGUGUGUG 2253 >> URS0000B28F5D_9598 Pan troglodytes long non-coding RNA NONPTRT016479.1 E-value: 5.4e+3 Identity: 60.23% Query coverage: 26.73% Gaps: 11.36% Alignment: Query 168 UGUGUAUGUAUGUGUGAGGGUU-------AUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUG 248 || |||| | ||||||||| || ||| | ||||| | ||| | |||| | |||||| ||| ||| |||| Sbjct 1049 CCUGGAUGUGUCUGUGAGGGUGUUCCUUGAUGAGACGAACAUUUGAAUAUGUAGACUUAGUAAAGUAAUU---GCCCUCCCCAGUGUG 1133 >> URS0002402E42_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC004700) E-value: 5.4e+3 Identity: 63.86% Query coverage: 25.08% Gaps: 9.64% Alignment: Query 43 AGUUCCAUGGGUUGCA---AAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUA----AGACCUUUUAGAGAUGCC 118 || | ||| ||| ||||||| |||| || ||||||| | | || | ||| ||||| | || || ||| ||| Sbjct 70465 AGCAUUAGGGGGUGCGUAUAAAUUACCAUCCCUUGAUUUUGCAAAACAC-UCCUAGCCAUACUUGCAAUCUCUUUGAGUCGCC 70546 >> URS0000BC81B6_34839 Chinchilla lanigera (Long-tailed chinchilla) lncRNA (ENSCLAG00000025325.1) E-value: 5.4e+3 Identity: 62.50% Query coverage: 18.48% Gaps: 0.00% Alignment: Query 150 UCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 | | ||| || ||||||||| ||| |||||| | || | ||||| | Sbjct 936 UAAGAUCACUCUGUGGUGUGUGUGUGUGUGUGUGUGCGUGCACGCGCACACAUGUG 991 >> URS0002185019_9305 Sarcophilus harrisii (Tasmanian devil) lncRNA (ENSSHAG00000021235.1) E-value: 5.4e+3 Identity: 53.60% Query coverage: 40.92% Gaps: 8.80% Alignment: Query 64 ACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUC- 151 | || || | || | | | | | || ||| ||| | || ||| | || ||| ||| || ||| Sbjct 3464 AUUACCCCUAAAACUCUGAAGAAA-GAAAUACCCAGCUACCCUCUGG--GAAUUCCACCCACUUAUGCU-------AUUAGGAAUCAGG 3542 Query 152 UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 ||| ||| | |||||||| ||| |||||| | | Sbjct 3543 ACAAAGCUUCAAUGUGUGUGUGUGUGUGUGUGUGUG 3578 >> URS00023641FB_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC004698) E-value: 5.4e+3 Identity: 63.86% Query coverage: 25.08% Gaps: 9.64% Alignment: Query 43 AGUUCCAUGGGUUGCA---AAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUA----AGACCUUUUAGAGAUGCC 118 || | ||| ||| ||||||| |||| || ||||||| | | || | ||| ||||| | || || ||| ||| Sbjct 77187 AGCAUUAGGGGGUGCGUAUAAAUUACCAUCCCUUGAUUUUGCAAAACAC-UCCUAGCCAUACUUGCAAUCUCUUUGAGUCGCC 77268 >> URS0000EDF0B5_5661 Leishmania donovani gene:LdHU3.05.0800(CDS-product:CYC2-like_cyclin_p utative) E-value: 5.4e+3 Identity: 50.67% Query coverage: 41.58% Gaps: 16.00% Alignment: Query 62 UUACUAUCCUUUAAUUUUGCUAUAUACAUAC-----UAUCCAUAAGACCUUU---UAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUU 142 | || || ||| | ||||||| ||| ||| ||| | ||| ||| || | |||| | | |||| | | Sbjct 6322 UAACACCUCUCUAAAUACCCUAUAUAUAUAUAUAUAUAUAUAUAUUGCUUUUCUCCAGACAUAAGUAAUCUCUGCAUCCGUGCCCGUGU 6410 Query 143 GGGCAUCUC----------------UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 | || | | | || | ||||||||| ||| |||||| | | Sbjct 6411 GCGCCUUCCCCCCCCUGUGCAUGCUCGUGAUGUUCGCGGUGUGUGUGUGUGUGUGUGUGUG 6471 >> URS0000BC69E3_34839 Chinchilla lanigera (Long-tailed chinchilla) lncRNA (ENSCLAG00000025325.1) E-value: 5.4e+3 Identity: 62.50% Query coverage: 18.48% Gaps: 0.00% Alignment: Query 150 UCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 | | ||| || ||||||||| ||| |||||| | || | ||||| | Sbjct 936 UAAGAUCACUCUGUGGUGUGUGUGUGUGUGUGUGUGCGUGCACGCGCACACAUGUG 991 >> URS000242E3E0_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC004695) E-value: 5.4e+3 Identity: 63.86% Query coverage: 25.08% Gaps: 9.64% Alignment: Query 43 AGUUCCAUGGGUUGCA---AAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUA----AGACCUUUUAGAGAUGCC 118 || | ||| ||| ||||||| |||| || ||||||| | | || | ||| ||||| | || || ||| ||| Sbjct 92376 AGCAUUAGGGGGUGCGUAUAAAUUACCAUCCCUUGAUUUUGCAAAACAC-UCCUAGCCAUACUUGCAAUCUCUUUGAGUCGCC 92457 >> URS0002790535_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 5.4e+3 Identity: 61.11% Query coverage: 29.70% Gaps: 11.11% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGAC 250 |||||||||||| |||||| | || | |||| ||+| | || |||| |+| ||| |||| |||||||| Sbjct 10083 GUGUGUGUAUGUGUGUGUGUGUGUG-----UGUGAUAUUCUGACA---GCGUUUAAGAUU--GACUUAAGCAUUCCCACCUGUGAC 10158 Query 251 AUUC 254 | +| Sbjct 10159 AGCC 10162 >> URS00019D2086_9995 Marmota monax (woodchuck) non-coding RNA E-value: 5.4e+3 Identity: 53.57% Query coverage: 43.56% Gaps: 10.00% Alignment: Query 58 AAAAUUACUAUCCUUUAAUUUU---GCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUG 143 |||| ||| | |||| | | | || | | |||| ||| || | |||| | | | | |||||| Sbjct 2271 AAAAGCACUUUUCUUUUUUCUCUUCAGGCCACUUAUUCCAGCCAUUGAACCA---AGCUCUUUCCAGGCCA--CA-GGUUCACAGAUUG 2353 Query 144 GGCAUCU-----CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU 189 || | || || || ||| |||||||| ||| |||||| | || Sbjct 2354 GGAACCUAAGGCCUGGCAAAGGUGAUGUGUGUGUGUGUGUGUGUGUGUGUG 2404 >> URS000238DACD_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC004698) E-value: 5.4e+3 Identity: 63.86% Query coverage: 25.08% Gaps: 9.64% Alignment: Query 43 AGUUCCAUGGGUUGCA---AAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUA----AGACCUUUUAGAGAUGCC 118 || | ||| ||| ||||||| |||| || ||||||| | | || | ||| ||||| | || || ||| ||| Sbjct 77218 AGCAUUAGGGGGUGCGUAUAAAUUACCAUCCCUUGAUUUUGCAAAACAC-UCCUAGCCAUACUUGCAAUCUCUUUGAGUCGCC 77299 >> URS0000B28F5D_9598 Pan troglodytes long non-coding RNA NONPTRT016479.1 E-value: 5.4e+3 Identity: 60.23% Query coverage: 26.73% Gaps: 11.36% Alignment: Query 168 UGUGUAUGUAUGUGUGAGGGUU-------AUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUG 248 || |||| | ||||||||| || ||| | ||||| | ||| | |||| | |||||| ||| ||| |||| Sbjct 1049 CCUGGAUGUGUCUGUGAGGGUGUUCCUUGAUGAGACGAACAUUUGAAUAUGUAGACUUAGUAAAGUAAUU---GCCCUCCCCAGUGUG 1133 >> URS000235C4B6_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC004699) E-value: 5.4e+3 Identity: 63.86% Query coverage: 25.08% Gaps: 9.64% Alignment: Query 43 AGUUCCAUGGGUUGCA---AAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUA----AGACCUUUUAGAGAUGCC 118 || | ||| ||| ||||||| |||| || ||||||| | | || | ||| ||||| | || || ||| ||| Sbjct 73744 AGCAUUAGGGGGUGCGUAUAAAUUACCAUCCCUUGAUUUUGCAAAACAC-UCCUAGCCAUACUUGCAAUCUCUUUGAGUCGCC 73825 >> URS000240D8C4_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC004696) E-value: 5.4e+3 Identity: 63.86% Query coverage: 25.08% Gaps: 9.64% Alignment: Query 43 AGUUCCAUGGGUUGCA---AAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUA----AGACCUUUUAGAGAUGCC 118 || | ||| ||| ||||||| |||| || ||||||| | | || | ||| ||||| | || || ||| ||| Sbjct 71514 AGCAUUAGGGGGUGCGUAUAAAUUACCAUCCCUUGAUUUUGCAAAACAC-UCCUAGCCAUACUUGCAAUCUCUUUGAGUCGCC 71595 >> URS00023660FB_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC004698) E-value: 5.4e+3 Identity: 63.86% Query coverage: 25.08% Gaps: 9.64% Alignment: Query 43 AGUUCCAUGGGUUGCA---AAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUA----AGACCUUUUAGAGAUGCC 118 || | ||| ||| ||||||| |||| || ||||||| | | || | ||| ||||| | || || ||| ||| Sbjct 77099 AGCAUUAGGGGGUGCGUAUAAAUUACCAUCCCUUGAUUUUGCAAAACAC-UCCUAGCCAUACUUGCAAUCUCUUUGAGUCGCC 77180 >> URS000237F000_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC004701) E-value: 5.4e+3 Identity: 63.86% Query coverage: 25.08% Gaps: 9.64% Alignment: Query 43 AGUUCCAUGGGUUGCA---AAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUA----AGACCUUUUAGAGAUGCC 118 || | ||| ||| ||||||| |||| || ||||||| | | || | ||| ||||| | || || ||| ||| Sbjct 60194 AGCAUUAGGGGGUGCGUAUAAAUUACCAUCCCUUGAUUUUGCAAAACAC-UCCUAGCCAUACUUGCAAUCUCUUUGAGUCGCC 60275 >> URS00028142F4_13191 Pectinophora gossypiella (Pink bollworm) uncharacterized LOC126381271 E-value: 5.5e+3 Identity: 56.57% Query coverage: 32.34% Gaps: 12.12% Alignment: Query 117 CCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA-UGCACAUUCG 205 ||| ||||| | | ||| | ||| || ||||| |||||||||||| | ||| | | ||| | | || || Sbjct 578 CCCUGACUCGAAAACA--------ACGGG---GUGUUAUAAGUUUGAAGUGUGUGUAUGUGUCUGUCUGUGGCAUCGUAGCUCCCAAACG 656 Query 206 GAUAAAUGA 214 ||| | | Sbjct 657 GAUGAUCCA 665 >> URS000235650F_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC001729) E-value: 5.5e+3 Identity: 56.44% Query coverage: 33.33% Gaps: 5.94% Alignment: Query 15 CCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAU 99 |||||| || |||| | | ||| |||| | |||||| ||| | | ||| | ||| |||||||| Sbjct 153767 GUUGUCCUAAGUCAUAUUGAACAUGAUGAGGAGCAUGCCUGGCAAAACUACGAG------AAGGAGCUGAACACACACUAUCCAC 153845 Query 100 AAGACCUUUUAGAGAU 115 ||||| | ||| Sbjct 153846 AAGACGAGGUGGAGGA 153861 >> URS0000EDB329_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 5.5e+3 Identity: 57.89% Query coverage: 25.08% Gaps: 0.00% Alignment: Query 105 CUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGU 180 ||| ||||||| ||| | | | | | ||||||| || || |||| || | || |||| || Sbjct 605 UAUUUGGAGAUGCACAGGCAUGGACCAGUUUCAGAACUGGGCAUAUCCUACAACUACCAGCUCUGCAAAUGUUUGA 680 >> URS00025E6614_13489 Dicentrarchus labrax (European seabass) lncRNA (ENSDLAG00005029087.1) E-value: 5.5e+3 Identity: 62.11% Query coverage: 30.69% Gaps: 2.11% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUG--CACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAU 252 |||||||| ||| |||||| || |||+ ||||| ||| | ||+||| | | | ||| | || ||| | |||| ||| Sbjct 225 GUGUGUGUGUGUGUGUGUGUGGCUUACAAGAUGUGCACGUGAAGACAAAGGCAGUACUGUAGCUGUGGAUACACUUGUAUACUGUAUCAU 314 Query 253 UCUGU 257 + ||| Sbjct 315 CGUGU 319 >> URS00023B8D47_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC008510) E-value: 5.5e+3 Identity: 55.73% Query coverage: 42.57% Gaps: 1.53% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACU-CUACUGCGGU-GCUAGAU 141 ||| ||||| | | |||| | | ||| | | |||| | || | || | | || || | || | | | Sbjct 25025 CAACUCUACUAGACAACAUGUUUGUUGUUUACGCCCCAACCAUCCUUUCCUUCAAGGACUUCAAAACAGCUUCGGCAGCAACCUUUU 25111 Query 142 UGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 ||| |||| ||| | || || ||| ||||| |||||| | Sbjct 25112 UGGCCAUCGCUUUAUUUGAUGCGGCGUGCGUAUGCUUGUGUGUG 25155 >> URS00023CB8B1_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC008511) E-value: 5.5e+3 Identity: 55.73% Query coverage: 42.57% Gaps: 1.53% Alignment: Query 57 CAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACU-CUACUGCGGU-GCUAGAU 141 ||| ||||| | | |||| | | ||| | | |||| | || | || | | || || | || | | | Sbjct 22485 CAACUCUACUAGACAACAUGUUUGUUGUUUACGCCCCAACCAUCCUUUCCUUCAAGGACUUCAAAACAGCUUCGGCAGCAACCUUUU 22571 Query 142 UGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 ||| |||| ||| | || || ||| ||||| |||||| | Sbjct 22572 UGGCCAUCGCUUUAUUUGAUGCGGCGUGCGUAUGCUUGUGUGUG 22615 >> URS00023A9640_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC010626) E-value: 5.5e+3 Identity: 54.89% Query coverage: 40.92% Gaps: 7.52% Alignment: Query 90 UACUAUCCAUAAGACCUUUUAGAGAUGC--CCAGACUCUACUGCGGUGCUAGAUUGGG-------CAUCUCUUAAAACUUUGAGGUG 167 || |||| || |||||| | | ||| | || | | |||| ||| | | ||| | | | | | ||| Sbjct 19363 UAUUAUCUAU-AGACCUCUAAUAGAAACAUACAUGUACAAAGACGGUACUAAGUCACGUUAUACCCAUAUAUAUAUAUAUAUGUGUG 19448 Query 168 UGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 ||||| ||| |||||| | || || ||| | ||| | || Sbjct 19449 UGUGUGUGUGUGUGUGUGUGUGCUCUGAUCAGCUGACGGUUUCAUC 19494 >> URS00023B1E8A_13333 Amborella trichopoda (A. trichopoda) long non-coding RNA (ATRI_LNC002737) E-value: 5.6e+3 Identity: 77.27% Query coverage: 13.86% Gaps: 4.55% Alignment: Query 149 CUCUUAAAACUUUGAGGUGUGU--GUAUGUAUGUGUGAGGGUUA 190 | ||||||| |||| |||||| || ||||||||||| || | Sbjct 11957 GUUUUAAAACAUUGACGUGUGUAUGUGUGUAUGUGUGAAUGUGA 12000 >> URS0002700A62_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 5.6e+3 Identity: 54.55% Query coverage: 37.95% Gaps: 15.70% Alignment: Query 77 UUUGCUAUAUACAUA------CUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAAC 158 ||||| |||| || || | |||||||||| ||||| | || | || ||| | ||| | Sbjct 4664 UUUGCAAUAUUGAUGGGCUUCAGUCCCCUCAGACCUUUUAA--AUGCCAGGCCUGAAGUGG--------GACGGGUAACUCCAGAG-- 4739 Query 159 UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAU 191 || |||||||| ||| |||||| | ||| Sbjct 4740 -GGGAUGUGUGUGUGUGUGUGUGUGUGUGUUCC 4771 >> URS00023E6995_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC008471) E-value: 5.6e+3 Identity: 51.28% Query coverage: 47.85% Gaps: 10.26% Alignment: Query 80 GCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGU 168 | ||||||| || | | | | | | ||||| || | | | || ||| | |||| || || ||||||| | Sbjct 6115 GUAAUAUACAACCUUUAGUUGAAAAAUCCUCCGGAUGCUAUGAUUUACAUUCAGUCACAGAGUAGGCACAUCAUAGAACUUUGUUGGCA 6203 Query 169 GUGUAUGUA-----------UGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 || ||||| | | |||| |||||||| | | ||| |||| || Sbjct 6204 AUGCAUGUAGCAAAAAUACAUUUAUGAGAAUUAUCAGAGAUUUAGAAGCAUA-----CCUUCCACUU 6265 >> URS000273FB95_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 5.7e+3 Identity: 64.71% Query coverage: 16.83% Gaps: 7.84% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGU 170 || | | || ||||||| ||| ||||||| |||| | ||||| Sbjct 1439 AGGU----UUUCUGUCACAGAUUGGACAUGUCUUAAAUCUUUCAAGUGUGG 1485 >> URS00022914B1_181124 Marasmius oreades tRNA-Lys E-value: 5.7e+3 Identity: 69.35% Query coverage: 20.13% Gaps: 1.61% Alignment: Query 197 GCACAUUCGGAUAAAU-GAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGU 257 || || ||||||| || || | || || | | ||| | |||||||| || ||| |||| Sbjct 10 GCUCAAUCGGAUAUAUAGAGCAUCAGACUCUUAUUGCUGACUUCCGUCUUGGAACAAUCUGA 71 >> URS0001A0E460_9995 Marmota monax (woodchuck) non-coding RNA E-value: 5.7e+3 Identity: 69.05% Query coverage: 13.86% Gaps: 0.00% Alignment: Query 163 AGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||||||||||||| |||||| | || || | | || | Sbjct 559 UGGUGUGUGUAUGUGUGUGUGUGUGUGCGCACACACUCACAC 600 >> URS0000B47FF3_3981 Hevea brasiliensis miscellaneous RNA E-value: 5.7e+3 Identity: 61.84% Query coverage: 24.42% Gaps: 2.63% Alignment: Query 136 CUAGAUUGGGCAUCUCUUAAAAC--UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA 209 || ||||||||||||| | | ||| | | ||| || ||||| || ||| |||| | | |||| Sbjct 139 CUCCUAUGGGCAUCUCUUAGAGGCGAUCGAGAUCUAUGUUUGCUCCUGUGAUUGUGAUCUGAUGGAGAAGUUGAUA 214 >> URS000194C1BB_7950 Clupea harengus (Atlantic herring) lncRNA (ENSCHAG00000004510.1) E-value: 1.5e+2 Identity: 56.05% Query coverage: 49.83% Gaps: 14.65% Alignment: Query 100 AAGACCUUUUAGAGAUGCCCAGACUCUAC----UGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 || |||| | | || ||||||||| | | || ||| || | |||||| | |||||||||| Sbjct 1300 CAGGUUUUUUUUACACCCCUAGACUCUACGAUUUAUGCUGUUAGUGUGUGU----------------GUGUGUGUUUGUGUAUGUGUGU 1372 Query 185 GGGUUAUCAG--AUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGAC 250 | ||| ||| ||| || | || |||| |||||||| | | |||| | ||| || ||| Sbjct 1373 G-AUUAGCAGACAUGAGCAGUGAGAGGAAUGUUCUUCUGAUGGAAGUUCUCCCAUUCUUCUCUAGGAC 1439 >> URS000272F217_74358 Podarcis lilfordi non-coding RNA E-value: 5.7e+3 Identity: 67.39% Query coverage: 14.85% Gaps: 2.17% Alignment: Query 159 UUUGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUU 203 | || | |||||||| ||| |||||| | || || | |||| Sbjct 18 UGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACA 63 >> URS0001A1F9A7_7957 Carassius auratus (goldfish) lncRNA (ENSCARG00000045779.1) E-value: 5.7e+3 Identity: 56.70% Query coverage: 31.02% Gaps: 13.40% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUG---UGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCC 240 | | | |||||||| | | ||| || ||||||| | | | || | ||| | |||||||| |||||||| Sbjct 339 CACAGCCUUGAGGUGGGGAUGUGUUUGGCAAGUGAGGGGUCCGGUAAGUCUCCUCCGGUAA----------GUAUGUAAUUCCAGCCUUCC 419 Query 241 GUCCUG 246 |||| Sbjct 420 UUCCUU 425 >> URS0002534C1E_175245 uncultured fungus sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene E-value: 5.7e+3 Identity: 56.14% Query coverage: 35.31% Gaps: 10.53% Alignment: Query 147 AUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAU--CAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUU- 230 | | | ||||| ||||||| | |||| ||||| | || | || ||| | ||| || || | ||| | ||| Sbjct 1242 ACCGCC----UCUUUGUGGUGUGU-UGUGUAAGUGUGUGUGUAUAUAUAUAUAUACACACACAUACAUAUACACCACAUUAUUAUUA 1323 Query 231 ----CUAGCCUUCCGUCCUGUGACAUU 253 | |||| ||| | |||| | Sbjct 1324 UAUCCCGGCCUCAAGUCGAGCGACAGU 1350 >> URS0000624FC6_9483 Callithrix jacchus (white-tufted-ear marmoset) U4 spliceosomal RNA (ENSCJAG00000079881.1) E-value: 5.7e+3 Identity: 55.79% Query coverage: 30.36% Gaps: 8.42% Alignment: Query 181 GUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUG---UAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGU 268 ||||| ||||| || |||| | | ||| | | || | || || || ||| ||||| || || |||||| Sbjct 30 AUGAGGUUUAUCUGAGGCACGAUUG-----UUGAUCAUUGGAAACUUUUCCCAAUACCCCCCCAUCCCGUGACGACUUGCAAUAUAGUCGG 115 Query 269 UAUU 272 ||| Sbjct 116 CAUU 119 >> URS00025EF783_13489 Dicentrarchus labrax (European seabass) lncRNA (ENSDLAG00005031908.1) E-value: 5.7e+3 Identity: 52.47% Query coverage: 47.85% Gaps: 22.22% Alignment: Query 41 CGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUC-UA 127 |||||||||| || || ||| | || | ||| || ||| | | | | | |||| || | | Sbjct 863 UGAGUUCCAUG---------AUCAC---AUUUUGACCGUGUGGUGUACUUAACUUCCUCACAAAC------ACACACCCACACACACA 932 Query 128 CUGCGGUGCUAGAUUGGGCAU-CUCUUAAA----------AC-----UUUGAGGUGUGUGUAUGUAUGUGUGAG 185 |||| || || || | | ||| ||| || |||||| ||||||| ||| |||||| | Sbjct 933 CUGCUGUACUUGACUCAGUGCACUCAGAAACACAAGUGAAACUAGAGUUUGAG-UGUGUGUGUGUGUGUGUGUG 1005 >> URS00023FEE18_3880 Medicago truncatula (barrel medic) long non-coding RNA (MTRU_LNC007625) E-value: 5.8e+3 Identity: 84.38% Query coverage: 10.56% Gaps: 0.00% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCA 193 |||||||||| ||| ||||||||| ||||| Sbjct 1872 UAGGUGUGUGUGUGUGUGUGUGAGGCCUAUCA 1903 >> URS000195974D_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005000847.1) E-value: 5.8e+3 Identity: 59.14% Query coverage: 30.69% Gaps: 3.23% Alignment: Query 93 UAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUG 181 ||| |||| | | | | ||| ||||| || | + | | +| + ||||| ||||| | | |||||||| ||| |||| Sbjct 1552 UAUACAUAUGCCUGUGAAAUGAUCACCAGAAUCAAGCUAGUUAACA---CAUGCAUCACUUAACAUGAUUGUGUGUGUGUGUGUGUGUG 1637 Query 182 UGAG 185 || | Sbjct 1638 UGUG 1641 >> URS00025E1E99_9606 Homo sapiens (human) non-coding RNA E-value: 5.9e+3 Identity: 56.15% Query coverage: 40.26% Gaps: 7.69% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAAC--UUC------UGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 | || || | ||||| |||| || |||| | |||| || | | ||| | || | ||| || ||| |||| Sbjct 266 GGGUUGGUCUUGCUGUGUCAGGGGUAGCAGAGGUACAUCUUGACUUACCACAGUUUCUUUCUUUCUUUUUUAUUUUAUUCUUUACUCCU-- 354 Query 248 GACAUUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAAUGA 286 | || |||||| ||| || | || ||| |||| Sbjct 355 GGCAAGCUGUGACACAGUUAUUUUCAAGAGAUGUAAUAU 393 >> URS0000493DEB_9606 Homo sapiens (human) novel transcript, sense intronic to MORN1 E-value: 5.9e+3 Identity: 56.15% Query coverage: 40.26% Gaps: 7.69% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAAC--UUC------UGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 | || || | ||||| |||| || |||| | |||| || | | ||| | || | ||| || ||| |||| Sbjct 266 GGGUUGGUCUUGCUGUGUCAGGGGUAGCAGAGGUACAUCUUGACUUACCACAGUUUCUUUCUUUCUUUUUUAUUUUAUUCUUUACUCCU-- 354 Query 248 GACAUUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAAUGA 286 | || |||||| ||| || | || ||| |||| Sbjct 355 GGCAAGCUGUGACACAGUUAUUUUCAAGAGAUGUAAUAU 393 >> URS0002623B65_210409 Portunus trituberculatus (Swimming crab) uncharacterized LOC123517995 E-value: 5.9e+3 Identity: 51.75% Query coverage: 41.91% Gaps: 25.17% Alignment: Query 64 ACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCC--CAGACUCUACUGCGGUGCUAGAUUGG---- 144 || ||||||| || ||| ||| | | | | |||| || || | ||| || ||| || Sbjct 3315 ACCAUCCUUUCC---UGUCAUACACACA---UGC--------------ACAUGCACACACACACACUUGCUGUUUUAGGGAGGUUAU 3381 Query 145 G------CAUCUCUUAA----AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUA 190 | ||| || || ||| ||| |||||||| || |||||| | || | Sbjct 3382 GCAAUCUCAUGCCUGAAAUGUAACAAUGAUGUGUGUGUGUGCAUGUGUUUGUGUGA 3437 >> URS000198BDA4_2489341 Strigops habroptila (Kakapo) lncRNA (ENSSHBG00005012273.1) E-value: 5.9e+3 Identity: 53.96% Query coverage: 43.56% Gaps: 8.63% Alignment: Query 69 CCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC---UUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCA---- 147 | |||| |||| | | |||||||| | || | |||||| || || || || | |||| Sbjct 1454 CUAUUAAAUUUGGUUUCUACAUACUCAUCUUACUGUCUCUUUUUAGGUUAAUCCUGAAGCUGGGAUGG-----GCCUGGGACUUUG 1534 Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCAC 200 || | ||| ||| ||| | | ||| |||| |||||| | | | ||| Sbjct 1535 UCCCCUAACUUUUUUGUGUGAGGGGAUGCAUGUAUGAGGGCUGUUGGUAGCAG 1587 >> URS00009C4384_10090 Mus musculus long non-coding RNA NONMMUT061944.2 E-value: 6e+3 Identity: 57.98% Query coverage: 37.95% Gaps: 10.08% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACA-- 251 ||||||+||| ||||||||| +|||| | || |||| | || +| | ||||||| +|| | | || |||| Sbjct 3500 UGUGUGCAUGGUUGUGUGAGGA--GCCAGAGGUCAAUAUGGAUGACUGCCUCUGUUAUUGUAAACCU------GCUUUUUGAGACAAG 3579 Query 252 --UUCUGUGAUGUAGUCGUUAUUCAGUGAUA 280 +||| + || ||+ | ||| ||||||| Sbjct 3580 GUCUCUUCACUGAAGCUGAAAUUUAGUGAUA 3610 >> URS00025F5D35_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000082216.1) E-value: 6e+3 Identity: 65.22% Query coverage: 29.04% Gaps: 7.61% Alignment: Query 100 AAGACCU---UUUAGAGAUGCCCAGACUCUACUGCGGUGC-UAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 |||| || |||||||| || ||| || ||| ||| || || | ||||||| | |||||||||||| |||||| Sbjct 2799 AAGAGCUAUAUUUAGAGAAAACCCUCUUCUCUUGGAGUGUGCAGACUG-GCUCUUAUUAAAACCUG--UGUGUGUGUAUGUGUGUGUGC 2884 Query 185 GGG 187 | | Sbjct 2885 GUG 2887 >> URS0002382F68_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC007269) E-value: 6e+3 Identity: 60.92% Query coverage: 28.71% Gaps: 1.15% Alignment: Query 192 CAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUGA 278 ||||| | |||||| | ||||| | | ||||| |||| | | | || | || | ||| | |||| | | |||| | Sbjct 26495 AAGAUGAAGUGUCGGAUGAGCGAACUGUUAAGUGUAAAAGUAGC-UGCUGCCCCCUAACCAUUUGUUGUUUAGUUGAUCUUCAAGCA 26580 >> URS00027F8723_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015043253.1) E-value: 6e+3 Identity: 58.42% Query coverage: 33.33% Gaps: 10.89% Alignment: Query 86 UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUA 173 |||| | | | | | | || | | | ||||| || ||| || | ||| | | | | | | |||||||||||| Sbjct 3009 CACAUGCAACCAAGGAUAACUAUGAAUGCAGCCCA-ACACUAAUGAGAAGCU----------UAUAUAACGAUUAUGAGGUGUGUGUG 3085 Query 174 UGUAUGUGUGAGG 186 ||| |||||| | Sbjct 3086 UGUGUGUGUGUGU 3098 >> URS00023EF241_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC007269) E-value: 6e+3 Identity: 60.92% Query coverage: 28.71% Gaps: 1.15% Alignment: Query 192 CAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUGA 278 ||||| | |||||| | ||||| | | ||||| |||| | | | || | || | ||| | |||| | | |||| | Sbjct 26495 AAGAUGAAGUGUCGGAUGAGCGAACUGUUAAGUGUAAAAGUAGC-UGCUGCCCCCUAACCAUUUGUUGUUUAGUUGAUCUUCAAGCA 26580 >> URS00023C9070_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC007270) E-value: 6e+3 Identity: 60.92% Query coverage: 28.71% Gaps: 1.15% Alignment: Query 192 CAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUGA 278 ||||| | |||||| | ||||| | | ||||| |||| | | | || | || | ||| | |||| | | |||| | Sbjct 21469 AAGAUGAAGUGUCGGAUGAGCGAACUGUUAAGUGUAAAAGUAGC-UGCUGCCCCCUAACCAUUUGUUGUUUAGUUGAUCUUCAAGCA 21554 >> URS00027EE64F_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015043253.1) E-value: 6e+3 Identity: 58.42% Query coverage: 33.33% Gaps: 10.89% Alignment: Query 86 UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUA 173 |||| | | | | | | || | | | ||||| || ||| || | ||| | | | | | | |||||||||||| Sbjct 3083 CACAUGCAACCAAGGAUAACUAUGAAUGCAGCCCA-ACACUAAUGAGAAGCU----------UAUAUAACGAUUAUGAGGUGUGUGUG 3159 Query 174 UGUAUGUGUGAGG 186 ||| |||||| | Sbjct 3160 UGUGUGUGUGUGU 3172 >> URS000279342A_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 6e+3 Identity: 56.06% Query coverage: 40.92% Gaps: 7.58% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCC----UUCCGUCCUGUG 248 |||||||||||| |||||| | ||| || || | || | |||| || ||||| ||| || | || | ||| Sbjct 7869 GUGUGUGUAUGUGUGUGUGUGUGUUCAGAGCAGCGGAAGCG--ACACUGAAACACUUGUUGUACAUCUGUCCGAGCAGCAGUACAGUG 7954 Query 249 ACA----UUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAAUGAAU 288 ||| || || || || | || || | | | | | Sbjct 7955 ACAGAGCAGCUCUGUUGAAGAAUACAGACACGGACAGACUCAGU 7998 >> URS00009B6A2A_10090 Mus musculus long non-coding RNA NONMMUT028810.2 E-value: 6.1e+3 Identity: 55.22% Query coverage: 18.81% Gaps: 14.93% Alignment: Query 167 GUGUGUAUGUAUGUGUGA----------GGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAU 223 |||||| ||| ||||||| || | ||||| || || |||||| || | Sbjct 1626 GUGUGUGUGUGUGUGUGAAUACGUGUGUACACGCGCACACACACAUACGAAUGAAUGAAUAUCCUAC 1692 >> URS0000A9B3CF_9669 Mustela putorius furo (Domestic ferret) lncRNA (ENSMPUG00000030175.1) E-value: 6.1e+3 Identity: 57.94% Query coverage: 39.27% Gaps: 13.49% Alignment: Query 138 AGAUUGGGCAUCUCUU-AAAACU-----UUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGA 222 ||||| ||||| | || |||||| | || |||||||||| | ||||||| ||| || ||| | || ||| Sbjct 664 AGAUUCGGCAUGUGUUUAAAACUGAUUGCUUUGGGGUGUGUAUGUGGGGCAGAGGGUUGUCAU--------UC--AUAGAGACACCCCUGU 744 Query 223 UUGUAA-UUCUAGCCUUCCGUCCUGUGACAUUCUG 256 | || | || ||||||| |||||| Sbjct 745 CCCCCAUCACUGGGGAUCUUUCCUGUGUCAUUCUC 779 >> URS00023D5DB5_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002662) E-value: 6.1e+3 Identity: 58.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 170 UGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUC 254 ||| | ||| ||| | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| Sbjct 46875 GCCAUGGAGAUGUUAGGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUU 46953 Query 255 UGUGAUGUAGUCGUU 269 | ||| ||||| | Sbjct 46954 UCUGACAUAGUCUAU 46968 >> URS000234FD95_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002662) E-value: 6.1e+3 Identity: 58.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 170 UGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUG 256 ||| | ||| ||| | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| | Sbjct 9650 GCCAUGGAGAUGUUAGGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUUUC 9730 Query 257 UGAUGUAGUCGUU 269 ||| ||||| | Sbjct 9731 UGACAUAGUCUAU 9743 >> URS00023A86B2_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002662) E-value: 6.1e+3 Identity: 58.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 170 UGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUC 254 ||| | ||| ||| | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| Sbjct 46783 GCCAUGGAGAUGUUAGGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUU 46861 Query 255 UGUGAUGUAGUCGUU 269 | ||| ||||| | Sbjct 46862 UCUGACAUAGUCUAU 46876 >> URS00023AB76F_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002662) E-value: 6.1e+3 Identity: 58.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 170 UGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUC 254 ||| | ||| ||| | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| Sbjct 27397 GCCAUGGAGAUGUUAGGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUU 27475 Query 255 UGUGAUGUAGUCGUU 269 | ||| ||||| | Sbjct 27476 UCUGACAUAGUCUAU 27490 >> URS00024113E4_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002662) E-value: 6.1e+3 Identity: 58.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 170 UGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUC 254 ||| | ||| ||| | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| Sbjct 46776 GCCAUGGAGAUGUUAGGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUU 46854 Query 255 UGUGAUGUAGUCGUU 269 | ||| ||||| | Sbjct 46855 UCUGACAUAGUCUAU 46869 >> URS0002354406_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002662) E-value: 6.1e+3 Identity: 58.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 170 UGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUC 254 ||| | ||| ||| | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| Sbjct 27446 GCCAUGGAGAUGUUAGGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUU 27524 Query 255 UGUGAUGUAGUCGUU 269 | ||| ||||| | Sbjct 27525 UCUGACAUAGUCUAU 27539 >> URS0001976003_9823 Sus scrofa (pig) lncRNA (ENSSSCG00050049413.1) E-value: 6.2e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 475 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 565 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 566 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 614 >> URS00023767CB_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002593) E-value: 6.2e+3 Identity: 59.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 171 GUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCU 255 ||| | ||| | | | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| | Sbjct 30494 CCAUGGAGAUGUUAAGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUUU 30572 Query 256 GUGAUGUAGUCGUUA 270 ||| |||||| || Sbjct 30573 CUGACAUAGUCGAUA 30587 >> URS000240E2C1_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002593) E-value: 6.2e+3 Identity: 59.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 171 GUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCU 255 ||| | ||| | | | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| | Sbjct 30368 CCAUGGAGAUGUUAAGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUUU 30446 Query 256 GUGAUGUAGUCGUUA 270 ||| |||||| || Sbjct 30447 CUGACAUAGUCGAUA 30461 >> URS00023899BA_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002593) E-value: 6.2e+3 Identity: 59.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 171 GUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCU 255 ||| | ||| | | | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| | Sbjct 30355 CCAUGGAGAUGUUAAGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUUU 30433 Query 256 GUGAUGUAGUCGUUA 270 ||| |||||| || Sbjct 30434 CUGACAUAGUCGAUA 30448 >> URS000238DFBF_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002623) E-value: 6.2e+3 Identity: 59.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 171 GUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUU 253 ||| | ||| | | | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| Sbjct 100275 CCAUGGAGAUGUUAAGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUU 100351 Query 254 CUGUGAUGUAGUCGUUA 270 | ||| |||||| || Sbjct 100352 UUCUGACAUAGUCGAUA 100368 >> URS0002186A22_105023 Nothobranchius furzeri (turquoise killifish) lncRNA (ENSNFUG00015012023.1) E-value: 6.2e+3 Identity: 52.42% Query coverage: 40.92% Gaps: 6.45% Alignment: Query 60 AAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGC 146 | | |||| | ||| || | ||| | | | || || ||| ||| | || || | | || | Sbjct 967 CAGCAUAAUCCCCUUUUUUAGCCAAAUAUACCACACC-------CCAGUUGUGGAUAAAUCACAUCUGCAGCUGUUCACAGUGGGUC 1046 Query 147 AUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUG 183 | || ||| | || | ||||||| ||| |||||| Sbjct 1047 ACUGCUGGAAAGUGUGUG-UGUGUGUGUGUGUGUGUG 1082 >> URS0002819D4B_13191 Pectinophora gossypiella (Pink bollworm) uncharacterized LOC126381163 E-value: 6.2e+3 Identity: 55.67% Query coverage: 31.68% Gaps: 12.37% Alignment: Query 118 CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA-UGCACAUUCGG 206 || ||||| | | ||| | ||| || ||||| |||||||||||| | ||| | | ||| | | || ||| Sbjct 531 CCUGACUCAAAAACA--------ACGGG---GUGUUAUAAGUUUGAAGUGUGUGUAUGUGUCUGUCUGUGGCAUCGUAGCUCCCAAACGG 609 Query 207 AUAAAUG 213 || | Sbjct 610 AUGAUCC 616 >> URS000196EBA5_9823 Sus scrofa (pig) lncRNA (ENSSSCG00050049413.1) E-value: 6.2e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 558 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 648 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 649 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 697 >> URS00024036D2_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002624) E-value: 6.2e+3 Identity: 59.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 171 GUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCU 255 ||| | ||| | | | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| | Sbjct 99215 CCAUGGAGAUGUUAAGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUUU 99293 Query 256 GUGAUGUAGUCGUUA 270 ||| |||||| || Sbjct 99294 CUGACAUAGUCGAUA 99308 >> URS000274A775_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 6.2e+3 Identity: 58.95% Query coverage: 29.37% Gaps: 6.32% Alignment: Query 103 ACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACU------UUGAGGUGUGUGUAUGUAUGUGUGAGG 186 |||||||| || ||| | | | || | || | ||| ||| |||| | |||||||| ||| ||||||||| Sbjct 593 ACCUUUUAAAGCCGCCAUCAUGAUUGUCAGGAAACAUAUCGUUCAUUUCUAAAAAUAAGUAAACAAACGUGUGUGUGUGUGUGUGUGAGG 682 Query 187 GUUAU 191 | | | Sbjct 683 GCUGU 687 >> URS0000A8F647_59463 Myotis lucifugus (little brown bat) miRNA (ENSMLUG00000026659.1) E-value: 6.2e+3 Identity: 61.82% Query coverage: 18.15% Gaps: 0.00% Alignment: Query 158 CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 || |||||||| ||| |||||| | || || | ||||| | | | | Sbjct 22 UAUUUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCACACACACAUACACACACAC 76 >> URS0002395D88_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002594) E-value: 6.2e+3 Identity: 59.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 171 GUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCU 255 ||| | ||| | | | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| | Sbjct 29519 CCAUGGAGAUGUUAAGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUUU 29597 Query 256 GUGAUGUAGUCGUUA 270 ||| |||||| || Sbjct 29598 CUGACAUAGUCGAUA 29612 >> URS00024060B6_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002593) E-value: 6.2e+3 Identity: 59.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 171 GUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUU 253 ||| | ||| | | | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| Sbjct 110174 CCAUGGAGAUGUUAAGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUU 110250 Query 254 CUGUGAUGUAGUCGUUA 270 | ||| |||||| || Sbjct 110251 UUCUGACAUAGUCGAUA 110267 >> URS00019759B9_9823 Sus scrofa (pig) lncRNA (ENSSSCG00050051174.1) E-value: 6.2e+3 Identity: 54.92% Query coverage: 38.61% Gaps: 9.02% Alignment: Query 69 CCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGA-----UGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCU 152 || | || | ||| |||| | | |||| ||||| | ||| ||| ||| || || |||| || ||| || Sbjct 3091 CCGUCUCUUCUUCUAAAUACUCAUAACGCAUAUGACCUCUGAGACGACACCUGCGCAGUUUCCCUUGGGGUG------UGUGCACCUGC 3173 Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 || | |||||| | ||||||| | Sbjct 3174 GUGCGUGUUUGUGCGUGUGUGCGCAUGUGUGUG 3206 >> URS000195A0FD_9823 Sus scrofa (pig) lncRNA (ENSSSCG00050049413.1) E-value: 6.2e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCU 137 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | Sbjct 975 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUC 1063 Query 138 AGAUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 1064 AGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 1114 >> URS0000BC5D78_10089 Mus caroli (Ryukyu mouse) lncRNA (MGP_CAROLIEiJ_G0002503.1) E-value: 6.2e+3 Identity: 48.36% Query coverage: 40.26% Gaps: 15.57% Alignment: Query 66 UAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAA 155 || | | ||| || | | | | ||| | | || || || | | ||| || || || Sbjct 72 UACCUCUGAAUAAGGCCAACC----AACAGACCUAAACCUGCUCAGCAAUUCCAAAAGCCUAAUGUCUAGCCAGC--------------- 142 Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 ||| || |||||||| ||| |||||| | | Sbjct 143 GGCUUGGAUGUGUGUGUGUGUGUGUGUGUGUG 174 >> URS0002391B1B_113636 Populus tremula (P. tremula) long non-coding RNA (PTRE_LNC002593) E-value: 6.2e+3 Identity: 59.00% Query coverage: 33.00% Gaps: 6.00% Alignment: Query 171 GUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCU 255 ||| | ||| | | | | |||| | | || | ||| ||| | | ||||| | | | || ||||||||| | Sbjct 30663 CCAUGGAGAUGUUAAGUUAAACAGAGGAGCUGGUGGCAUAUUGACCUUGUCACUGUAAAUUUGACAUU------UGUGACAUUUU 30741 Query 256 GUGAUGUAGUCGUUA 270 ||| |||||| || Sbjct 30742 CUGACAUAGUCGAUA 30756 >> URS000275B6E9_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 6.3e+3 Identity: 66.23% Query coverage: 24.75% Gaps: 2.60% Alignment: Query 166 UGUGUGUAUGUAUGUGUG-AGGGUUAUCAGAUGCACAUUCG-GAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCC 240 ||||||| ||| |||||| |||||| |||||||| || | |||| | | | || ||| | | +|||| + Sbjct 132 UGUGUGUGUGUGUGUGUGGGGGGUUAACAGAUGCAAAUAGGUGAUAUGUUACCAGCUAAUUUGAUUGACAGCCACAU 208 >> URS0001973B3E_9823 Sus scrofa (pig) lncRNA (ENSSSCG00040048060.1) E-value: 6.3e+3 Identity: 66.67% Query coverage: 17.82% Gaps: 3.70% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAA 215 |||| |||||| ||| | |||| || ||| || |||| | || | || | Sbjct 6662 GAGGCGUGUGUGUGUGUAUGUGU--GUGUUCAUAUACACACACAGACACAUACA 6713 >> URS00027D1646_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 6.4e+3 Identity: 59.18% Query coverage: 30.03% Gaps: 8.16% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU----UCGGAUAA---AUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUC 243 |||||||| ||| |||||| | || | ||||| ||| ||| || | ||||+ | | | +||| |+||| +| Sbjct 53392 GUGUGUGUGUGUGUGUGUGUGUGUACUGAGAUGUUCAUGAAUAAGGA-AAAUGAAGAACCACAGGGUACAAUACCAGCGACCAUGA 53476 Query 244 CUGUGACAUUCU 255 | | |||||+ | Sbjct 53477 CAGAGACAUCUU 53488 >> URS000234F400_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC021423) E-value: 6.4e+3 Identity: 53.16% Query coverage: 47.52% Gaps: 16.46% Alignment: Query 34 AUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUAC-UAUCCAUAA-------------GACCUUU 108 || ||| | ||||||| || || | |||||| | | ||| |||||| ||| ||| | || ||| | Sbjct 1728 AUCAAACCAAGUUCCACAUGUAGCUACCCUACUAUGCAUGAAUGGGUAUAUAUAUAUAUAUAUGCUCAAAAAUAGGGAAAUAGACAU-- 1814 Query 109 UAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUA 177 |||| || || | || | | | | ||| | | | || |||| ||||| |||| Sbjct 1815 -AGAGGG-----GAAUC--CAACGAUUCCGG--CGUGCACCCCCCACCUCUGUGAGUCGUGUGGGUGUA 1873 >> URS000275E440_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 6.5e+3 Identity: 74.51% Query coverage: 16.83% Gaps: 1.96% Alignment: Query 137 UAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 +||||| | | | ||| ||||||+||||| |||||| || |||||| | | Sbjct 28268 CAGAUU-GUCUUUUCUGAAAACUCUGAGGAGUGUGUGAGUGUGUGUGUGUG 28317 >> URS00019C1307_9995 Marmota monax (woodchuck) non-coding RNA E-value: 6.5e+3 Identity: 68.63% Query coverage: 16.83% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAA 215 |||||||| ||| |||||| | || | || | |||| | | |||| | Sbjct 14 GUGUGUGUGUGUGUGUGUGUGUGUAAACACACACACACACACACAAAUACA 64 >> URS000237216D_4556 Setaria viridis (S. viridis) long non-coding RNA (SVIR_LNC002956) E-value: 6.5e+3 Identity: 59.57% Query coverage: 31.02% Gaps: 4.26% Alignment: Query 26 CAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGA 112 | | | || ||| || ||||| || || | | || || | || ||| | || | ||| | || |||||||| ||| Sbjct 73850 CGAACCUGUCUAAAUCGUGUUCCUUGCGUCACCA--UU--GAUUCCUUGAUUCUCGACGAUCCUUACCACACAAAAGACCUUCUAGG 73932 Query 113 GAUGCCC 119 | ||| Sbjct 73933 GUACCCC 73939 >> URS000279C242_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 6.5e+3 Identity: 74.51% Query coverage: 16.83% Gaps: 1.96% Alignment: Query 137 UAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 +||||| | | | ||| ||||||+||||| |||||| || |||||| | | Sbjct 25126 CAGAUU-GUCUUUUCUGAAAACUCUGAGGAGUGUGUGAGUGUGUGUGUGUG 25175 >> URS00023DC352_13333 Amborella trichopoda (A. trichopoda) long non-coding RNA (ATRI_LNC003089) E-value: 6.5e+3 Identity: 62.69% Query coverage: 22.11% Gaps: 0.00% Alignment: Query 124 UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUA 190 | ||| | | ||| | ||| || | | | || || |||| |||||||| ||||| || | Sbjct 878 UGUACCCCACUUAGAGAGUAGGCUUCCCAUGAGCCUAGAUGGAGUGUCUAUGUAUGAGUGAGAGUGA 944 >> URS0000EF12EF_9823 Sus scrofa (pig) lncRNA (ENSSSCG00070017784.1) E-value: 6.6e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 509 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 599 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 600 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 648 >> URS0002608FAE_10224 Saccoglossus kowalevskii (Acorn worm) uncharacterized LOC102800964 E-value: 6.6e+3 Identity: 70.83% Query coverage: 15.84% Gaps: 0.00% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACA 201 || |||||||||+ || | |||| ||| || |+|| |||||||| Sbjct 1814 CAAUUUUUGAGGUGCAUGAAAAUAUGGGUGUGGAUCAUUAGAUGCACU 1861 >> URS00019507EF_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025040812.1) E-value: 6.6e+3 Identity: 67.27% Query coverage: 18.15% Gaps: 3.64% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAAC 216 |||| |||||| ||| | |||| || ||| || |||| | || | || || Sbjct 6857 GAGGCGUGUGUGUGUGUAUGUGU--GUGUUCAUAUACACACACAGACACAUACAC 6909 >> URS0000CDBA1F_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 6.7e+3 Identity: 62.50% Query coverage: 25.74% Gaps: 2.50% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCA--GAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGU 242 |||||||| ||| |||||| | ||| | | || ||+ | | +| |||| + ||| |||| +||||||| || Sbjct 1231 GUGUGUGUGUGUGUGUGUGUGUGUUUUAAAGUAUUGCCACACAGGCAUAUGAGAGAGCUCUUGAAAUUGCAGCCUUCUGU 1310 >> URS00021834AC_9925 Capra hircus (Goat) lncRNA (ENSCHIG00010016138.1) E-value: 6.7e+3 Identity: 60.56% Query coverage: 22.44% Gaps: 4.23% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU---AAAUGAACUUCUGAUUGUAAUUCU 232 | |||||||||| ||| |||||| | | |||| | | || ||||| || || | | || Sbjct 737 GAGUGUGUAUGUGUGUACAUGGGUUAGCUGUUGCAGACACACAUGGCAAAUGCUCUCUAGACCGGCACUCC 807 >> URS0000D6D8B7_9606 Homo sapiens (human) non-protein coding lnc-GVQW2-1:3 E-value: 6.8e+3 Identity: 60.81% Query coverage: 24.42% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUU 238 |||||||| ||| |||||| | || ||| ||| | || ||+| || ||+| | |+|| + | || | Sbjct 2059 GUGUGUGUGUGUGUGUGUGUGUGUGUUCAUAUGUAUAUAUAGACACAUACACCUUUUUGGGCAAACAAAACCGU 2132 >> URS0000B9B3C7_3981 Hevea brasiliensis miscellaneous RNA E-value: 6.8e+3 Identity: 58.82% Query coverage: 27.39% Gaps: 5.88% Alignment: Query 157 ACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA--AUGAACUUCUGAUUGUAAUUCUAGCCUUC 239 | | ||||| |||| |||||| | | | | ||| |||| | | ||| ||||||| | ||| | ||| || Sbjct 1107 AUUG---UGUGUGCAUAUGCAUGUGUAAAGCACAAGAAAUGUACAUAAGCCUUGUUUUGAUCUUCUGAAGGAAAUACCAGCUCUC 1188 >> URS0000E93B85_9606 Homo sapiens (human) HSALNT0082546 E-value: 6.9e+3 Identity: 49.19% Query coverage: 52.15% Gaps: 17.30% Alignment: Query 28 AUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGC- 117 ||| | || | | | ||| | |||| || || |||| | | || | | || | || || |||| || | | Sbjct 376 AUCACCACAAACAUGUGAGUAAUGCGCUGCACUAUGAC-----UUUAUUCUGGCCACAGCAUCACCAGGCAAUAGGAAUUUUCCAGCUCCA 461 Query 118 CCAGACUCUACUGCGGUGCUA------------GAUUGGGCAUCUCUUAAAACUU--------------UGAGGUGUGUGUAUGUAUGUGU 182 | ||| ||| || || || ||| | ||| ||||| || | || |||||| ||| ||||| Sbjct 462 CUAGAAUCUCAUGUCAUGGUACCACCAUUGUCUAUGUGGUCUUCUGUUAAACAUUGUUACGAGGUGCUUGGCGGGGUGUGUGUGUGUGUGU 552 Query 183 GAG 185 | Sbjct 553 GUA 555 >> URS0000AB12C1_10116 Rattus norvegicus long non-coding RNA NONRATT032213.1 E-value: 6.9e+3 Identity: 50.59% Query coverage: 47.52% Gaps: 18.82% Alignment: Query 42 GAGUUCCAUGGGUUGCAAAAUUA-------CUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACU 124 || ||||| ||| ||| | | ||| || | | ||| | ||| || | || | ||| | | | ||||||| Sbjct 653 CAGAGCCAUGCUUUGGAAACUCAGGGAAUCGAUUCCAUUCACUCUGCAACUCCCAUUCUCUUCA------CCUUUGGUGGUCUCCAGACU 736 Query 125 CUACUGCGGUGCU---AGAUUG-------GGCAUCUCUUAAAACUU---------UGAGGUGUGUGUAUGUAUGUGUGAG 185 || ||| | | || | ||| | || | || ||||||||| ||| |||||| | Sbjct 737 CUUCUGGAAGGAUCCCUGAAUAUCAUGCUGGCUCUUGCUAGACAAGUGAUUUGGCUGUGGUGUGUGUGUGUGUGUGUGUG 816 >> URS000234BAD2_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC037290) E-value: 6.9e+3 Identity: 52.87% Query coverage: 47.19% Gaps: 16.56% Alignment: Query 35 UGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUAC-UAUCCAUA-------------AGACCUUUUAG 111 | ||| | ||||||| || || | |||||| | | ||| |||||| ||| ||| | | |||| | || Sbjct 806 UCAAACCAAGUUCCACAUGUAGCUACCCUACUAUGCAUGAAUGGGUAUAUAUAUAUAUAUAUGCUCAAAAAUAGAGAAAUAGACAU---AG 893 Query 112 AGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUA 177 || || || | || | | | | ||| | | | || |||| ||||| |||| Sbjct 894 AGGG-----GAAUC--CAACGAUUCCGG--CGUGCACCCCCCACCUCUAUGAGUCGUGUGGGUGUA 950 >> URS000217BD9A_9305 Sarcophilus harrisii (Tasmanian devil) lncRNA (ENSSHAG00000025038.1) E-value: 6.9e+3 Identity: 56.52% Query coverage: 22.77% Gaps: 8.70% Alignment: Query 143 GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 || || || ||||| ||||||||| ||| || ||| | | ||| | | | | | | Sbjct 1519 AGGAUUCCUUUCAAACUAAAGGGUGUGUGUGUGUGUGCGUGUGC------AUAUGUAUACACACACACA 1581 >> URS000236EB97_4615 Ananas comosus (pineapple) long non-coding RNA (ACOM_LNC037391) E-value: 6.9e+3 Identity: 52.87% Query coverage: 47.19% Gaps: 16.56% Alignment: Query 35 UGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUAC-UAUCCAUA-------------AGACCUUUU 109 | ||| | ||||||| || || | |||||| | | ||| |||||| ||| ||| | | |||| | Sbjct 1099 UCAAACCAAGUUCCACAUGUAGCUACCCUACUAUGCAUGAAUGGGUAUAUAUAUAUAUAUAUGCUCAAAAAUAGAGAAAUAGACAU--- 1184 Query 110 AGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUA 177 |||| || || | || | | | | ||| | | | || |||| ||||| |||| Sbjct 1185 AGAGGG-----GAAUC--CAACGAUUCCGG--CGUGCACCCCCCACCUCUAUGAGUCGUGUGGGUGUA 1243 >> URS0002340F84_9606 Homo sapiens (human) HSALNT0326081 E-value: 7e+3 Identity: 56.82% Query coverage: 27.39% Gaps: 15.91% Alignment: Query 104 CCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUA-----GAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 || | | | | ||||| ||||| | || | | ||| || ||| || | |||||||| ||| |||||| | Sbjct 531 CCAUACACAUGUUCCCAGCUUCUACAGAGGGCCAAAUUCUGAUAGG---------AAAUUCUUUACGUGUGUGUGUGUGUGUGUGUGU 609 >> URS00023416EF_9606 Homo sapiens (human) HSALNT0326077 E-value: 7e+3 Identity: 56.82% Query coverage: 27.39% Gaps: 15.91% Alignment: Query 104 CCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUA-----GAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 || | | | | ||||| ||||| | || | | ||| || ||| || | |||||||| ||| |||||| | Sbjct 557 CCAUACACAUGUUCCCAGCUUCUACAGAGGGCCAAAUUCUGAUAGG---------AAAUUCUUUACGUGUGUGUGUGUGUGUGUGUGU 635 >> URS0002345644_9606 Homo sapiens (human) HSALNT0326079 E-value: 7e+3 Identity: 56.82% Query coverage: 27.39% Gaps: 15.91% Alignment: Query 104 CCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUA-----GAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 || | | | | ||||| ||||| | || | | ||| || ||| || | |||||||| ||| |||||| | Sbjct 810 CCAUACACAUGUUCCCAGCUUCUACAGAGGGCCAAAUUCUGAUAGG---------AAAUUCUUUACGUGUGUGUGUGUGUGUGUGUGU 888 >> URS000233C915_9606 Homo sapiens (human) HSALNT0326080 E-value: 7e+3 Identity: 56.82% Query coverage: 27.39% Gaps: 15.91% Alignment: Query 104 CCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUA-----GAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 || | | | | ||||| ||||| | || | | ||| || ||| || | |||||||| ||| |||||| | Sbjct 826 CCAUACACAUGUUCCCAGCUUCUACAGAGGGCCAAAUUCUGAUAGG---------AAAUUCUUUACGUGUGUGUGUGUGUGUGUGUGU 904 >> URS00023446A4_9606 Homo sapiens (human) HSALNT0326078 E-value: 7e+3 Identity: 56.82% Query coverage: 27.39% Gaps: 15.91% Alignment: Query 104 CCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUA-----GAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 || | | | | ||||| ||||| | || | | ||| || ||| || | |||||||| ||| |||||| | Sbjct 465 CCAUACACAUGUUCCCAGCUUCUACAGAGGGCCAAAUUCUGAUAGG---------AAAUUCUUUACGUGUGUGUGUGUGUGUGUGUGU 543 >> URS00008B5A1A_9606 Homo sapiens (human) non-protein coding LINC02117:5 E-value: 7e+3 Identity: 56.82% Query coverage: 27.39% Gaps: 15.91% Alignment: Query 104 CCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUA-----GAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 || | | | | ||||| ||||| | || | | ||| || ||| || | |||||||| ||| |||||| | Sbjct 381 CCAUACACAUGUUCCCAGCUUCUACAGAGGGCCAAAUUCUGAUAGG---------AAAUUCUUUACGUGUGUGUGUGUGUGUGUGUGU 459 >> URS00021EFBD8_9541 Macaca fascicularis (Crab-eating macaque) lncRNA (ENSMFAG00000052206.1) E-value: 7e+3 Identity: 66.67% Query coverage: 23.76% Gaps: 8.33% Alignment: Query 85 AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAA 156 ||||||||||| ||||| | ||| | ||||| |||||| | | || || |||| ||| | || Sbjct 1680 AUACAUACUAUACAUAA-AUCUUCUGAAGAUGACCAGACGCAAUGGCUAUGAC-----AGGCACCUCAUGAA 1745 >> URS0001974D0E_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005029972.1) E-value: 7e+3 Identity: 58.51% Query coverage: 29.70% Gaps: 5.32% Alignment: Query 110 AGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAAC----UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAG 194 | |||||||||| | | |||||| || || ||| | || | | | || || ||| ||| |||||| | || Sbjct 6010 AUGGAUGCCCAGAGCCCCCAACGGUGCCAGGCC-AUCAGGUCUGAGCACCGUCUGUUGGAUGAAUGAAUGAAUGAGUGAGGCCCACCAC 6097 Query 195 AUGCA 199 || || Sbjct 6098 AUCCA 6102 >> URS0001974D0E_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005029972.1) E-value: 7e+3 Identity: 58.51% Query coverage: 29.70% Gaps: 5.32% Alignment: Query 110 AGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAAC----UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAG 194 | |||||||||| | | |||||| || || ||| | || | | | || || ||| ||| |||||| | || Sbjct 6010 AUGGAUGCCCAGAGCCCCCAACGGUGCCAGGCC-AUCAGGUCUGAGCACCGUCUGUUGGAUGAAUGAAUGAAUGAGUGAGGCCCACCAC 6097 Query 195 AUGCA 199 || || Sbjct 6098 AUCCA 6102 >> URS000239D791_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC014630) E-value: 7e+3 Identity: 52.67% Query coverage: 48.84% Gaps: 7.33% Alignment: Query 144 GGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUU 230 ||| | ||| | || | | || ||| | || ||||||| ||||| | ||||| | | ||| || || ||| Sbjct 47100 GGCCUUUCUGUAUCAUUCUAUCAGGUUGGAUGGGUCUGAGAGGGUUGUCAGAGGUGCAUUCUUAGGUACGAAGUUA---GUGAAAUA 47183 Query 231 CUAG-CCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGU-UAUUCAGUGAUAUAAUGAAUCUC 291 | || || | || || || |||| |||| | | ||| || || Sbjct 47184 GUGUUUCUCACGCAAUAUGGUAUG------CGUGGUCGCACCAUCAGCCAGACAAUUAACUUC 47240 >> URS000196399F_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035013675.1) E-value: 7e+3 Identity: 57.89% Query coverage: 30.36% Gaps: 3.16% Alignment: Query 97 CAUAAGACCUUUUAGAGAUG-CCCAGACUCUACUGCGGUGCUAGA--UUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGU 182 | |||| || || || || | || | | | | | ||| || | ||| | ||| |||||||| ||| ||||| Sbjct 2366 CUAAAGAACUCUUGGAAAUAGCACACCCAAAAACACUGACCCAGAGACUGAAUCUUUCUCCUAUCUUGUGUGUGUGUGUGUGUGUGUGU 2454 Query 183 GAGGGU 188 | |||| Sbjct 2455 GUGGGU 2460 >> URS000240EB0C_2711 Citrus sinensis (sweet orange) long non-coding RNA (CSIN_LNC001718) E-value: 7e+3 Identity: 64.52% Query coverage: 20.46% Gaps: 0.00% Alignment: Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUU 238 | | | || |||||||||| ||| | | | ||| | || | || ||||| ||| || Sbjct 62914 ACUUUCGUGGCUUAUCAGAUGUCGUUUCAGCAAGAAGAAUUCCUUAAUGAAAUUCAAGCAUU 62975 >> URS0002350723_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC014636) E-value: 7e+3 Identity: 52.67% Query coverage: 48.84% Gaps: 7.33% Alignment: Query 144 GGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUU 230 ||| | ||| | || | | || ||| | || ||||||| ||||| | ||||| | | ||| || || ||| Sbjct 49558 GGCCUUUCUGUAUCAUUCUAUCAGGUUGGAUGGGUCUGAGAGGGUUGUCAGAGGUGCAUUCUUAGGUACGAAGUUA---GUGAAAUA 49641 Query 231 CUAG-CCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGU-UAUUCAGUGAUAUAAUGAAUCUC 291 | || || | || || || |||| |||| | | ||| || || Sbjct 49642 GUGUUUCUCACGCAAUAUGGUAUG------CGUGGUCGCACCAUCAGCCAGACAAUUAACUUC 49698 >> URS000271B575_74358 Podarcis lilfordi non-coding RNA E-value: 7e+3 Identity: 60.00% Query coverage: 37.29% Gaps: 6.96% Alignment: Query 75 AUUUUGCUAUAUACAUACUAUCCAUAAG--ACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUU 160 | || | || || | |||| || | ||| | || |||||| ||||| |||| | | ||| | | || | | ||| Sbjct 2014 AGUUGGAGAUGCACCUCCUAUUUAUGUGUCACCAAUGAGUAUUGCCCA----CUACU--GGUGGCACACUGGUCUUUUCAUUGACCUU 2095 Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGG 187 || ||||||| | || || | ||| Sbjct 2096 UGUGGUGUGUAUGUGACUGCUUCAGGA 2122 >> URS00009B9605_10090 Mus musculus long non-coding RNA NONMMUT011667.2 E-value: 7.1e+3 Identity: 57.98% Query coverage: 38.61% Gaps: 3.36% Alignment: Query 121 GACUCUACUG--CGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 ||||| || | |||||| ||| | || | | | || |||||||||||| |||||| | | | || || | | Sbjct 1715 GACUCCUGUGCCCAGUGCUACCUUGAGUGUCAUUCCAGUGUGUG-UGUGUGUGUAUGUGUGUGUGUGUGACACUGAGUGACCAGCCUG 1801 Query 207 AUAAAUGAACUUCUGAUUGUAAUUCUAGCCU 237 || | || | || || || | | || | Sbjct 1802 AUGAUCUGACAUGUGGUU-UAUUACCAGUCC 1831 >> URS0001978762_9823 Sus scrofa (pig) lncRNA (ENSSSCG00060009146.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCU 137 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | Sbjct 1027 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUC 1115 Query 138 AGAUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 1116 AGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 1166 >> URS00019768E1_9823 Sus scrofa (pig) lncRNA (ENSSSCG00030018265.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 475 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 565 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 566 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 614 >> URS00027B7F76_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 7.1e+3 Identity: 59.09% Query coverage: 28.05% Gaps: 10.23% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA---AAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 |||||||| ||| |||| |||| ||||| || | || | ||| | | | |||||| || || |||| | Sbjct 21944 GUGUGUGUGUGUGUGUGAGAGGAGUAUCA------CAAUGAGACAGGAAAUCACUGCAAGGAUAAAAUUCUCUCCCUCUCUCCUCU 22023 Query 248 GA 249 | Sbjct 22024 CA 22025 >> URS0001966289_9823 Sus scrofa (pig) lncRNA (ENSSSCG00040051722.1, ENSSSCG00060009146.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCU 137 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | Sbjct 975 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUC 1063 Query 138 AGAUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 1064 AGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 1114 >> URS000195D423_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025000427.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCU 137 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | Sbjct 1027 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUC 1115 Query 138 AGAUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 1116 AGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 1166 >> URS00027ACD79_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 7.1e+3 Identity: 62.86% Query coverage: 31.68% Gaps: 13.33% Alignment: Query 88 CAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACU--GCG---GUGCUAGAUUGGGCAUCUC---UU-AAAACUUUGAGGUGUG 169 |||| ||| |||| | + || | |||| ||| | +||| ||| ||||||| +| || | | | ||||| | ||||| Sbjct 238 CAUA-UAUACAUACACGCACGUAUAUAUGCGCAGCAUACACUUUGCGUGUGUGCUAGGGCGUGCGUGUUCGUGUAAAAACGU----GUGUG 323 Query 170 UGUAUGUAUGUGUG 183 ||||| |||||||| Sbjct 324 UGUAUAUAUGUGUG 337 >> URS0001958494_9823 Sus scrofa (pig) lncRNA (ENSSSCG00040051722.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 558 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 648 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 649 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 697 >> URS00027AC9B7_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 7.1e+3 Identity: 59.09% Query coverage: 28.05% Gaps: 10.23% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA---AAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 |||||||| ||| |||| |||| ||||| || | || | ||| | | | |||||| || || |||| | Sbjct 21944 GUGUGUGUGUGUGUGUGAGAGGAGUAUCA------CAAUGAGACAGGAAAUCACUGCAAGGAUAAAAUUCUCUCCCUCUCUCCUCU 22023 Query 248 GA 249 | Sbjct 22024 CA 22025 >> URS0001A1FC61_7957 Carassius auratus (goldfish) lncRNA (ENSCARG00000017376.1) E-value: 7.1e+3 Identity: 56.90% Query coverage: 34.65% Gaps: 9.48% Alignment: Query 129 UGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGA----GGUGUGUGUAUG----UAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 ||| ||| | || ||| || | || |||| ||||||||| || | |||||| | || | | | || | |||| Sbjct 72 UGCAGUGGGGGCUUUAACAUGUCACAUGACCUUGAUCUUGGUGUGUGUGUGUGUGUGUGUGUGUGUGUAAACGUGGCCGCAGCAUGUUAAA 162 Query 212 UGAA---CUUCUGAUUGUAAUUCUA 233 | | |||||| | || || | Sbjct 163 UAGAUGCAUUCUGACAGGAAAUCGA 187 >> URS0002774F72_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 7.1e+3 Identity: 59.09% Query coverage: 28.05% Gaps: 10.23% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA---AAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 |||||||| ||| |||| |||| ||||| || | || | ||| | | | |||||| || || |||| | Sbjct 25664 GUGUGUGUGUGUGUGUGAGAGGAGUAUCA------CAAUGAGACAGGAAAUCACUGCAAGGAUAAAAUUCUCUCCCUCUCUCCUCU 25743 Query 248 GA 249 | Sbjct 25744 CA 25745 >> URS0001A206F3_7957 Carassius auratus (goldfish) lncRNA (ENSCARG00000017376.1) E-value: 7.1e+3 Identity: 56.90% Query coverage: 34.65% Gaps: 9.48% Alignment: Query 129 UGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGA----GGUGUGUGUAUG----UAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 ||| ||| | || ||| || | || |||| ||||||||| || | |||||| | || | | | || | |||| Sbjct 72 UGCAGUGGGGGCUUUAACAUGUCACAUGACCUUGAUCUUGGUGUGUGUGUGUGUGUGUGUGUGUGUGUAAACGUGGCCGCAGCAUGUUAAA 162 Query 212 UGAA---CUUCUGAUUGUAAUUCUA 233 | | |||||| | || || | Sbjct 163 UAGAUGCAUUCUGACAGGAAAUCGA 187 >> URS0001976650_9823 Sus scrofa (pig) lncRNA (ENSSSCG00060009146.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 475 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 565 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 566 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 614 >> URS00022AFB67_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000073293.1) E-value: 7.1e+3 Identity: 61.43% Query coverage: 23.10% Gaps: 12.86% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGA 222 || | |||| ||||||||| ||| |||||| | ||| || | || |||||| ||| Sbjct 4684 UAUAUAUUUGGGGUGUGUGUGUGUGUGUGUGUGUGUUGCCAAGU-------UGGU--CUUGAACUCCUGU 4744 >> URS00027B832A_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 7.1e+3 Identity: 59.09% Query coverage: 28.05% Gaps: 10.23% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA---AAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 |||||||| ||| |||| |||| ||||| || | || | ||| | | | |||||| || || |||| | Sbjct 25664 GUGUGUGUGUGUGUGUGAGAGGAGUAUCA------CAAUGAGACAGGAAAUCACUGCAAGGAUAAAAUUCUCUCCCUCUCUCCUCU 25743 Query 248 GA 249 | Sbjct 25744 CA 25745 >> URS0001965C0A_9823 Sus scrofa (pig) lncRNA (ENSSSCG00030018265.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCU 137 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | Sbjct 975 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUC 1063 Query 138 AGAUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 1064 AGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 1114 >> URS00023FF398_218851 Aquilegia coerulea (A. coerulea) long non-coding RNA (ACOE_LNC000693) E-value: 7.1e+3 Identity: 61.90% Query coverage: 26.40% Gaps: 4.76% Alignment: Query 12 CAUCCA-GUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAU---CCUUUAAUUUUGCUAUAUACAUA 91 ||| || ||| ||| |||| | ||| || | | ||||| ||| || | || || | ||||||| || ||| | Sbjct 54386 CAUGCAGGUCUAACAUAAUCAUUGUGAGAAGGCUCUGUAUGGGGAGCACAACCAACAUUUACCCUAGAUUUUGCAAUGUACGCA 54469 >> URS000195B822_9823 Sus scrofa (pig) lncRNA (ENSSSCG00030018265.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 558 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 648 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 649 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 697 >> URS0000E0E71B_7266 Drosophila guanche non-coding RNA E-value: 7.1e+3 Identity: 66.20% Query coverage: 23.43% Gaps: 2.82% Alignment: Query 163 AGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUA 233 | |||||||| ||| |||||| | ||| || |||| ||||| || | | | ||| ||||| | Sbjct 567 AUGUGUGUGUGUGUGUGUGUGUGUGUUGCACGACCCACAGCGUGAUAAUUGUAUUGGUAAUU--AAUUCCA 635 >> URS0001A201F9_7957 Carassius auratus (goldfish) lncRNA (ENSCARG00000017376.1) E-value: 7.1e+3 Identity: 56.90% Query coverage: 34.65% Gaps: 9.48% Alignment: Query 129 UGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGA----GGUGUGUGUAUG----UAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 ||| ||| | || ||| || | || |||| ||||||||| || | |||||| | || | | | || | |||| Sbjct 72 UGCAGUGGGGGCUUUAACAUGUCACAUGACCUUGAUCUUGGUGUGUGUGUGUGUGUGUGUGUGUGUGUAAACGUGGCCGCAGCAUGUUAAA 162 Query 212 UGAA---CUUCUGAUUGUAAUUCUA 233 | | |||||| | || || | Sbjct 163 UAGAUGCAUUCUGACAGGAAAUCGA 187 >> URS0001A19880_7957 Carassius auratus (goldfish) lncRNA (ENSCARG00000017376.1) E-value: 7.1e+3 Identity: 56.90% Query coverage: 34.65% Gaps: 9.48% Alignment: Query 129 UGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGA----GGUGUGUGUAUG----UAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 ||| ||| | || ||| || | || |||| ||||||||| || | |||||| | || | | | || | |||| Sbjct 72 UGCAGUGGGGGCUUUAACAUGUCACAUGACCUUGAUCUUGGUGUGUGUGUGUGUGUGUGUGUGUGUGUAAACGUGGCCGCAGCAUGUUAAA 162 Query 212 UGAA---CUUCUGAUUGUAAUUCUA 233 | | |||||| | || || | Sbjct 163 UAGAUGCAUUCUGACAGGAAAUCGA 187 >> URS0001951612_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025000427.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 556 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 646 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 647 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 695 >> URS000195A05E_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025000427.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCU 137 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | Sbjct 975 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUC 1063 Query 138 AGAUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 1064 AGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 1114 >> URS00026AC167_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 7.1e+3 Identity: 62.86% Query coverage: 31.68% Gaps: 13.33% Alignment: Query 88 CAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACU--GCG---GUGCUAGAUUGGGCAUCUC---UU-AAAACUUUGAGGUGUG 169 |||| ||| |||| | + || | |||| ||| | +||| ||| ||||||| +| || | | | ||||| | ||||| Sbjct 238 CAUA-UAUACAUACACGCACGUAUAUAUGCGCAGCAUACACUUUGCGUGUGUGCUAGGGCGUGCGUGUUCGUGUAAAAACGU----GUGUG 323 Query 170 UGUAUGUAUGUGUG 183 ||||| |||||||| Sbjct 324 UGUAUAUAUGUGUG 337 >> URS0001970A74_9823 Sus scrofa (pig) lncRNA (ENSSSCG00040051722.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 475 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 565 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 566 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 614 >> URS0001976BED_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025000427.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 475 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 565 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 566 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 614 >> URS000197BBCF_9823 Sus scrofa (pig) lncRNA (ENSSSCG00060009146.1) E-value: 7.1e+3 Identity: 53.15% Query coverage: 41.25% Gaps: 14.69% Alignment: Query 59 AAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU------GCUAG 139 ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | | || Sbjct 556 AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGACCUUGGUCAG 646 Query 140 AUUGGGCAUCUCUUA-AAACUUUGAGGUGU-------GUGUAUGUAUGUGUG 183 || || |||| |||||| | ||||| |||| ||| |||||| Sbjct 647 CAAGGACA---CUUAUAAACUUGGCGGUGUGGGGUGUGUGUGUGUGUGUGUG 695 >> URS00025EFCEC_9606 Homo sapiens (human) novel transcript E-value: 7.2e+3 Identity: 60.27% Query coverage: 22.77% Gaps: 5.48% Alignment: Query 146 CAUCUCUUAAAACUUUGAG----GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGA 214 || |+|+ || | | |||||||| ||| |||||| | ||||+||||| | | || ||| || Sbjct 781 CAGCCCCAAAGAUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUUACCAGAUCAAUGAACUGAGAAAAGA 853 >> URS00023FA0D5_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC004262) E-value: 7.2e+3 Identity: 62.16% Query coverage: 36.63% Gaps: 9.91% Alignment: Query 65 CUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUC 151 |||||||+||||| ||||||| ||| ||| |||| ||| | | | || ||||||| || | || || || |+ Sbjct 58875 GUAUCCUUCAAUUUACCUAUAUAUAUA-UAUGUAUAAUUCCUGUAAAACUUG-CCAGACUUG---GCAGGGCAUGAGUGAA---CCU 58953 Query 152 UUAAAACUUUGAGGUGUGUGUAUG 175 |||||||| ||| ||| + +| Sbjct 58954 GUAAAACUU---GGUUUGUCCUCG 58974 >> URS0001A0EF91_9995 Marmota monax (woodchuck) non-coding RNA E-value: 7.2e+3 Identity: 62.67% Query coverage: 23.76% Gaps: 4.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUG---UAAUUCUAGCC 236 |||||||| ||| |||||| | || || |||||||+ | || || | +| || | | ||+| |||| Sbjct 3740 GUGUGUGUGUGUGUGUGUGUGUGUAGGCACAUGCACACAUGCAUGUAUAUAUCUGUGGUACUGAUCAUCCAAGCC 3814 >> URS000238EBD4_57918 Fragaria vesca (wild strawberry) long non-coding RNA (FVES_LNC002475) E-value: 7.2e+3 Identity: 68.92% Query coverage: 24.09% Gaps: 6.76% Alignment: Query 38 AAACGAGUUCCAUGGG-UUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUA 110 ||| ||| ||||||| |||| || | | | ||||| |||||| || | ||||||| |||| ||| | Sbjct 122965 UAACCAGUCCCAUGGGCUUGCGCAAGU-CCCUGCUUUACUUUUGCCAUG---AAACUAUCCGCAAGAGAUUUCA 123034 >> URS0002701AF3_74358 Podarcis lilfordi non-coding RNA E-value: 7.2e+3 Identity: 68.89% Query coverage: 14.52% Gaps: 2.22% Alignment: Query 161 UGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 || | |||||||| ||| |||||| | || || | |||| | Sbjct 15 UGUGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACAC 59 >> URS000240F5EA_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC010591) E-value: 7.2e+3 Identity: 63.24% Query coverage: 22.11% Gaps: 1.47% Alignment: Query 7 CGUGACAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUU-ACUAUCCUUU 73 || || ||| | ||||| ||| || | |||| || ||| || || ||||| || ||| | Sbjct 2133 CGCGAACUCCGUUGGUACACGAUCAGAAUAAGAACGGUCUCUAUGAGUGGCCAAAUUUACCCUCCAUG 2200 >> URS00008B5D3F_9606 Homo sapiens (human) non-protein coding lnc-OR4F29-3:9 E-value: 7.3e+3 Identity: 46.71% Query coverage: 55.12% Gaps: 23.95% Alignment: Query 21 CUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAG 111 | || || |||| || ||| || | ||||| | ||| | || ||| ||| || ||| | Sbjct 237 AUCCAGAAGCUUGCUGGUCU----CUCCCUGUCCUACAAAAGAGCAUACCUCUU---------------CUGUAACCAGAAGGCCCUUUUG 308 Query 112 AGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 | | | || || || | | |||||||| ||||||| ||| |||||| | | Sbjct 309 AUUAGUCAAGGCUGGACAG---AGUGAGAUUGGGGG------------------UGUGUGUGUGUGUGUGUGUGUG 363 >> URS000230E34A_4896 Schizosaccharomyces pombe (fission yeast) non-coding RNA E-value: 7.3e+3 Identity: 64.56% Query coverage: 25.08% Gaps: 3.80% Alignment: Query 39 AACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACC---UUUUAGAGA 114 ||||| | | ||| |||| || | |||||||||||| ||| | | | |||| ||| || ||| || || Sbjct 219 AACGAUUAGAGUACGUUUCAAACUUCCAAUCCUUUAAUUUCAUCGUAUCCUGAAUGUCCAAAAGCCCAACUUUGAGUGA 297 >> URS00027262E8_74358 Podarcis lilfordi non-coding RNA E-value: 7.3e+3 Identity: 69.05% Query coverage: 13.86% Gaps: 2.38% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 || |||||||| ||| |||||| | || || | |||| Sbjct 19 UG-UGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACAC 59 >> URS0002371AC7_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC002345) E-value: 7.3e+3 Identity: 61.84% Query coverage: 25.08% Gaps: 6.58% Alignment: Query 139 GAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGA 214 ||| | || | || || || | ||||||||||| ||||| | |||||| |||| || | | | | Sbjct 27105 GAUAGACAAUUUUUUGGAAGUUGAUGAUGUGUGUAUGUUUGUGU-----CUUUCAGAUACACAAACGCACACACGC 27175 >> URS0002401919_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC002345) E-value: 7.3e+3 Identity: 61.84% Query coverage: 25.08% Gaps: 6.58% Alignment: Query 139 GAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGA 214 ||| | || | || || || | ||||||||||| ||||| | |||||| |||| || | | | | Sbjct 39666 GAUAGACAAUUUUUUGGAAGUUGAUGAUGUGUGUAUGUUUGUGU-----CUUUCAGAUACACAAACGCACACACGC 39736 >> URS0001965FDE_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000044830.2) E-value: 7.3e+3 Identity: 59.82% Query coverage: 34.98% Gaps: 13.39% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCAC--AUUCGGAUAAAUGAACUUCUGAUUG-UAAUUCUAGC-CUUCCGUCCUG-U 247 |||||||| || |||||| | || ||| | ||| ||| | || | | | | | ||| ||| ||||| | ||| | Sbjct 4272 UGUGUGUGU--GUGUGUGUGUGUGUAGUCACACACACAUAUUUGCAUCUCUUA-------AGUAUCAUUUCCAGCCCUUCCAUUCUGAU 4351 Query 248 GACA-UUCUGUGAUGUAGUCGUU 269 ||| || | | ||| | | || Sbjct 4352 GACUCCUCAGGGCUGUCGCCAUU 4374 >> URS0000D5BD61_9606 Homo sapiens (human) non-protein coding STX18-AS1:13 E-value: 7.4e+3 Identity: 66.67% Query coverage: 18.81% Gaps: 10.53% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||||||||| |||||||| ||| |||||| | || || | ||||| | Sbjct 16033 CCUCUUAAAA------UGUGUGUGUGUGUGUGUGUGCGUGUAUUCGUACGCACACCC 16083 >> URS0000EED58A_9606 Homo sapiens (human) STX18 antisense RNA 1 (head to head) E-value: 7.4e+3 Identity: 66.67% Query coverage: 18.81% Gaps: 10.53% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||||||||| |||||||| ||| |||||| | || || | ||||| | Sbjct 2712 CCUCUUAAAA------UGUGUGUGUGUGUGUGUGUGCGUGUAUUCGUACGCACACCC 2762 >> URS0002567E87_9606 Homo sapiens (human) ncRNA E-value: 7.4e+3 Identity: 66.67% Query coverage: 18.81% Gaps: 10.53% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||||||||| |||||||| ||| |||||| | || || | ||||| | Sbjct 2562 CCUCUUAAAA------UGUGUGUGUGUGUGUGUGUGCGUGUAUUCGUACGCACACCC 2612 >> URS0000EB2272_9606 Homo sapiens (human) HSALNT0068394 E-value: 7.4e+3 Identity: 66.67% Query coverage: 18.81% Gaps: 10.53% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||||||||| |||||||| ||| |||||| | || || | ||||| | Sbjct 2526 CCUCUUAAAA------UGUGUGUGUGUGUGUGUGUGCGUGUAUUCGUACGCACACCC 2576 >> URS0000E94CBE_9606 Homo sapiens (human) HSALNT0068393 E-value: 7.4e+3 Identity: 66.67% Query coverage: 18.81% Gaps: 10.53% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||||||||| |||||||| ||| |||||| | || || | ||||| | Sbjct 2728 CCUCUUAAAA------UGUGUGUGUGUGUGUGUGUGCGUGUAUUCGUACGCACACCC 2778 >> URS0000EEE00A_9606 Homo sapiens (human) STX18 antisense RNA 1 (head to head) E-value: 7.4e+3 Identity: 66.67% Query coverage: 18.81% Gaps: 10.53% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||||||||| |||||||| ||| |||||| | || || | ||||| | Sbjct 2562 CCUCUUAAAA------UGUGUGUGUGUGUGUGUGUGCGUGUAUUCGUACGCACACCC 2612 >> URS00025D1ACE_9606 Homo sapiens (human) non-coding RNA E-value: 7.4e+3 Identity: 66.67% Query coverage: 18.81% Gaps: 10.53% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||||||||| |||||||| ||| |||||| | || || | ||||| | Sbjct 2561 CCUCUUAAAA------UGUGUGUGUGUGUGUGUGUGCGUGUAUUCGUACGCACACCC 2611 >> URS000252BE5A_9606 Homo sapiens (human) ncRNA E-value: 7.4e+3 Identity: 66.67% Query coverage: 18.81% Gaps: 10.53% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||||||||| |||||||| ||| |||||| | || || | ||||| | Sbjct 2712 CCUCUUAAAA------UGUGUGUGUGUGUGUGUGUGCGUGUAUUCGUACGCACACCC 2762 >> URS000251C851_9606 Homo sapiens (human) non-coding RNA E-value: 7.4e+3 Identity: 66.67% Query coverage: 18.81% Gaps: 10.53% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 ||||||||| |||||||| ||| |||||| | || || | ||||| | Sbjct 2711 CCUCUUAAAA------UGUGUGUGUGUGUGUGUGUGCGUGUAUUCGUACGCACACCC 2761 >> URS00027EEE87_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015038569.1) E-value: 7.4e+3 Identity: 50.97% Query coverage: 45.54% Gaps: 26.45% Alignment: Query 45 UUCCAUGGGUUGCAAAAUUACUAUCC-------UUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUC 125 | | ||||| |||| | | || | || ||||||||| |||| ||| | | || | ||| | || Sbjct 4033 CUGCCUGGGUCUAAAAACUGCCAUUUGUAUUUUUCAAAGUUUGCUAUA---------UCCACCAGAGUUACUGGAAA---CCAAAUUC 4108 Query 126 UACUGCGGUGCUAGAUUGGG---CAUCUCUUAAAACUUU-GAG------GUGUGUGUAUGUAUGUGU 182 || || | |||||| ||| ||| | |||||||| ||| ||||| Sbjct 4109 AC------------AUCUGGCUUCUUCUCUUUAAAAUUUUUGGGAAAAUGUGUGUGUGUGUGUGUGU 4163 >> URS000195CD5F_9823 Sus scrofa (pig) lncRNA (ENSSSCG00025014309.1, ENSSSCG00035054381.1, ENSSSCG00045004756.1) E-value: 7.4e+3 Identity: 67.19% Query coverage: 19.80% Gaps: 6.25% Alignment: Query 152 UUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGG---UUAUCAGAUGCACAUUCGGAUAAA 211 |||||| | || | |||||||| ||| |||||| | | | | || ||| | || |||| Sbjct 3619 UUAAAAAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGAUGAGCAAAUGAAAAUGCGGACUCC 3682 >> URS00019F4526_9995 Marmota monax (woodchuck) non-coding RNA E-value: 7.4e+3 Identity: 51.72% Query coverage: 47.85% Gaps: 5.52% Alignment: Query 61 AUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUC 151 |||| |||| || || | | ||| | | | | | ||||| || | | || | || || ||| Sbjct 657 AUUAGGCUCCUCAAAAUUGUGUUCAAACACCUGGACUACAUGUGUUCUUAGACCUGGUAAAGCCAUAU-------CAGGAAAUGGGAUCAA 740 Query 152 UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 | ||||| | |||||||| ||| |||||| | || | | | | || | Sbjct 741 UAAAAACACA-AAGUGUGUGUGUGUGUGUGUGUGUGUGUGUACACGUAUAUAUG 793 >> URS0002831A89_6604 Mya arenaria (Soft-shell clam) uncharacterized LOC128233686 E-value: 7.4e+3 Identity: 67.65% Query coverage: 22.11% Gaps: 1.47% Alignment: Query 160 UUGAGGUGUGUGUAUGUAUGUGUGAGGGUUA-UCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGU 226 |||| ||| || | ||| | |||| || || ||||||||||| || | ||| || ||| || Sbjct 3039 CUGAGAUGUAUGAAGAUAUUUCAGAGGAAUAUUCUGAUGCACAUUCCGAAGAUUGAUCUGAUGAGAGU 3106 >> URS00027E5D87_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015038569.1) E-value: 7.4e+3 Identity: 50.97% Query coverage: 45.54% Gaps: 26.45% Alignment: Query 45 UUCCAUGGGUUGCAAAAUUACUAUCC-------UUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUC 125 | | ||||| |||| | | || | || ||||||||| |||| ||| | | || | ||| | || Sbjct 3157 CUGCCUGGGUCUAAAAACUGCCAUUUGUAUUUUUCAAAGUUUGCUAUA---------UCCACCAGAGUUACUGGAAA---CCAAAUUC 3232 Query 126 UACUGCGGUGCUAGAUUGGG---CAUCUCUUAAAACUUU-GAG------GUGUGUGUAUGUAUGUGU 182 || || | |||||| ||| ||| | |||||||| ||| ||||| Sbjct 3233 AC------------AUCUGGCUUCUUCUCUUUAAAAUUUUUGGGAAAAUGUGUGUGUGUGUGUGUGU 3287 >> URS0002413615_218851 Aquilegia coerulea (A. coerulea) long non-coding RNA (ACOE_LNC001116) E-value: 7.4e+3 Identity: 61.90% Query coverage: 26.40% Gaps: 4.76% Alignment: Query 12 CAUCCA-GUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAU---CCUUUAAUUUUGCUAUAUACAUA 91 ||| || ||| ||| |||| | ||| || | | ||||| ||| || | || || | ||||||| || ||| | Sbjct 9124 CAUGCAGGUCUAACAUAAUCAUUGUGAGAAGGCUCUGUAUGGGGAGCACAACCAACAUUUACCCUAGAUUUUGCAAUGUACGCA 9207 >> URS0000D5ACA1_9606 Homo sapiens (human) non-protein coding MIR3681HG:27 E-value: 7.5e+3 Identity: 61.82% Query coverage: 35.31% Gaps: 7.27% Alignment: Query 152 UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA---UGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGC 235 | | || ||| ||||||| ||| |||||| | || ||| | ||||| | | || | | |||| | || ||| || || Sbjct 18557 UAGAGACAUUG---UGUGUGUGUGUGUGUGUGUGUGUGAUCCUAUUUUGCACUUCCUGACA-AGGAACCUGUGGCUGUCGUUAUAUU 18639 Query 236 CUUCCGUCCUGUGACAUUCUGUG 258 | | | ||| |||| ||| Sbjct 18640 CA-CAGCUCUGCUGUAUUCGGUG 18661 >> URS00009B2661_10090 Mus musculus long non-coding RNA NONMMUT034158.2 E-value: 7.5e+3 Identity: 52.53% Query coverage: 62.71% Gaps: 10.10% Alignment: Query 55 UGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGAC--CUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGA 140 ||| ||||||| | | | |||| | | | |||||||| ||| | |||| | || | | || |||| | Sbjct 1355 UGCUAAAUUACAUUUC-GAACCCUUGCCUUCUCCCCACUAUCCAAGUGACAACCUUUAUCAUUAUACAUAUACACAUGGGGUGUGUGU 1441 Query 141 UUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCA------GAUGCACAUUCGGAUAAAUGAACUUCUGA 222 || | | | | |||||||| ||| | | ||||| || || | | | || ||| | | || ||| Sbjct 1442 GUGUGUGUGUGU----------GUGUGUGUGUGUGUUGGGGAGAGGGGUACCAUGGCAGGCUUCUUGAUCAGAUGA-CAACUUUGUGA 1518 Query 223 UUGUAAUUCUAGCCUUCCGUCC 244 ||||| |||||| || Sbjct 1519 AGUAGAUUCUGUCCUUCCAUCU 1540 >> URS00009AEAB5_10090 Mus musculus long non-coding RNA NONMMUT034159.2 E-value: 7.5e+3 Identity: 52.53% Query coverage: 62.71% Gaps: 10.10% Alignment: Query 55 UGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGAC--CUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGA 140 ||| ||||||| | | | |||| | | | |||||||| ||| | |||| | || | | || |||| | Sbjct 863 UGCUAAAUUACAUUUC-GAACCCUUGCCUUCUCCCCACUAUCCAAGUGACAACCUUUAUCAUUAUACAUAUACACAUGGGGUGUGUGU 949 Query 141 UUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCA------GAUGCACAUUCGGAUAAAUGAACUUCUGA 222 || | | | | |||||||| ||| | | ||||| || || | | | || ||| | | || ||| Sbjct 950 GUGUGUGUGUGU----------GUGUGUGUGUGUGUUGGGGAGAGGGGUACCAUGGCAGGCUUCUUGAUCAGAUGA-CAACUUUGUGA 1026 Query 223 UUGUAAUUCUAGCCUUCCGUCC 244 ||||| |||||| || Sbjct 1027 AGUAGAUUCUGUCCUUCCAUCU 1048 >> URS00022B4856_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00845007461.1) E-value: 7.5e+3 Identity: 57.33% Query coverage: 24.75% Gaps: 0.00% Alignment: Query 67 AUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAU 141 | || | ||||| || |||| | | |||| | ||| | | ||||| | |||||| ||| | Sbjct 333 AACCAGGAGUUUUGAAAUUUACACAGUUUCCAGAUGACUCUCUUGAGAUCUUCGCACUCUAUGAUUCUGCAGGUC 407 >> URS0000AAADED_7897 Latimeria chalumnae (coelacanth) miRNA (ENSLACG00000021587.1) E-value: 7.5e+3 Identity: 73.17% Query coverage: 13.53% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 |||||||| ||| |||||| | | || |||||||| | Sbjct 8 GUGUGUGUGUGUGUGUGUGUGUAUAUGCACAUGCACAUACA 48 >> URS000237780D_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC026915) E-value: 7.6e+3 Identity: 67.12% Query coverage: 23.76% Gaps: 5.48% Alignment: Query 55 UGCAAAAUUACUAUCCUUUAAUUUUGCUAU-AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCU 126 ||||| | |||||||||| |||| | | | ||| | ||| |||||||||| || | |||||| Sbjct 107989 CCCAAAACUGCUAUCCUUUACCUUUGUGCUCACAAAUAAUGGCCAAAAGACCUUUUUC---UGGCUUGACUCU 108058 >> URS0001A1AD39_8839 Anas platyrhynchos (mallard) lncRNA (ENSAPLG00020013384.1) E-value: 7.6e+3 Identity: 53.98% Query coverage: 35.97% Gaps: 3.54% Alignment: Query 93 UAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGG----GCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUG 179 | | || ||||| | |||| |||||| || ||||| || | | || || | ||| | | | | | | | || Sbjct 286 UUUUCACAAGACAUACGAGAGGAGCCCAGUACCUGCUGCGCUGACACACUGCAACCACAGCACUUCAGCCCUGGGCUGGCAGACAAUUUUG 376 Query 180 UGUGAGGGUUAUCAGAUGCACA 201 | ||| | ||| | ||| | Sbjct 377 UCUGAAGUGGCUCAAAAGCAGA 398 >> URS000233D06F_9606 Homo sapiens (human) HSALNT0403654 E-value: 7.7e+3 Identity: 61.76% Query coverage: 22.11% Gaps: 7.35% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC-GGAUAAAUGAACUUC 219 | || || | || ||| |||||| ||| ||||||| |||| | ||||||| ||| Sbjct 649 UGAAUGAACCAGCUAUGGAAUUGUCUGUGUGUGGGCAUUCAGAUGGACAUACCGGAUAAA----AUUC 712 >> URS0002578223_9606 Homo sapiens (human) non-coding RNA E-value: 7.7e+3 Identity: 71.93% Query coverage: 18.48% Gaps: 10.53% Alignment: Query 149 CUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUG-CACAUUC 204 |||| |||| | |||||||| ||| |||||| | || ||||||| |||| | Sbjct 2072 CUCUCAAAA-----AAGUGUGUGUGUGUGUGUGUGUGUGUCUUCAGAUGUCACACUG 2123 >> URS0000D61CFC_9606 Homo sapiens (human) IRF1 antisense RNA 1 E-value: 7.7e+3 Identity: 71.93% Query coverage: 18.48% Gaps: 10.53% Alignment: Query 149 CUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUG-CACAUUC 204 |||| |||| | |||||||| ||| |||||| | || ||||||| |||| | Sbjct 2072 CUCUCAAAA-----AAGUGUGUGUGUGUGUGUGUGUGUGUCUUCAGAUGUCACACUG 2123 >> URS000233F2D6_9606 Homo sapiens (human) HSALNT0272436 E-value: 7.7e+3 Identity: 61.76% Query coverage: 22.11% Gaps: 7.35% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC-GGAUAAAUGAACUUC 219 | || || | || ||| |||||| ||| ||||||| |||| | ||||||| ||| Sbjct 1531 UGAAUGAACCAGCUAUGGAAUUGUCUGUGUGUGGGCAUUCAGAUGGACAUACCGGAUAAA----AUUC 1594 >> URS00009B3D85_10090 Mus musculus long non-coding RNA NONMMUT031839.2 E-value: 7.7e+3 Identity: 52.20% Query coverage: 46.53% Gaps: 13.21% Alignment: Query 12 CAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCU---UU---------AAUUUUGCUAUAUA 87 |||||||||| ||| |||| |||||| ||| |||| || || | | || || || || || |||| Sbjct 2177 CAUCCAGUCCCACAGCGUCUUCAUGAAAC--AGUCCCAUAGGAUGUUUAUG-UCGAUGCUGCUUUUUUAAGGGGAACUUCAGCGUAUA 2261 Query 88 CAUACUAUCCAU------AAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCU 152 | | || | | | ||| || ||||| | | | ||||||| | || | | | Sbjct 2262 GAAAUCAUUCUUUGCUGUUGUUCUUUUGAGGCAUGCCUUGCUCCCUGCUCUGUGCUAGCAUUGGAAGCACC 2332 >> URS0000A87FF3_7918 Lepisosteus oculatus (Spotted gar) lncRNA (ENSLOCG00000021234.1) E-value: 7.7e+3 Identity: 55.56% Query coverage: 36.63% Gaps: 17.78% Alignment: Query 12 CAUCCAGUCCUACACAAUCUUGAUGAAAACG----AGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUA----------UAU 86 ||||| | | | | ||| ||||| || | | | | | | |||| ||||||| ||||||| | || || || Sbjct 1462 CAUCCUUUUCAAAAUAAUGCAGAUGAUAAAGUUUCAUUACUAGGAAUUGCCAAAUUACCCUCCUUUAUUCUUUGUAGUGAAUAUCUUAA 1550 Query 87 ACAUACUAUCCAUAAG----------ACCUUUUAGAGAUGCCCAGA 122 ||| |||| | || || |||||| | |||||| Sbjct 1551 UUAUAAUAUCAAGGAGAUGAAGGCACACUGUUUAGAAAAGCCCAGU 1596 >> URS0000D039B9_9601 Pongo abelii (Sumatran orangutan) lincRNA E-value: 7.7e+3 Identity: 63.49% Query coverage: 20.79% Gaps: 15.87% Alignment: Query 145 GCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 | || |||| | ||||| |||| ||||||||| | ||| |||||||| | | Sbjct 83 GGAUUUCUUGAGACUUU----------UAUGCGAGUGUGAGGGCCAGCAGGUGCACAUUUGAA 135 >> URS00009C14D1_10090 Mus musculus long non-coding RNA NONMMUT069980.2 E-value: 7.8e+3 Identity: 51.85% Query coverage: 32.67% Gaps: 21.30% Alignment: Query 118 CCAGACUCU-ACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU--------UAUCAGAU 196 || |||||| | | || | || || | | | |||||||| ||| |||||| | || | || Sbjct 1311 CCUGACUCUCAAAGUUGUCCAAGUGUGUGUGUGU--------------GUGUGUGUGUGUGUGUGUGUGUGUAUGUAUGGAAACAUGC 1384 Query 197 GCACAUUCGGAUAAAUGAAC 216 |||| ||| | | |||| Sbjct 1385 CCACACAUGGACAUACGAAC 1404 >> URS0002618BBB_6596 Mercenaria mercenaria (Hard clam (quahog)) uncharacterized LOC123544423 E-value: 7.8e+3 Identity: 52.45% Query coverage: 43.89% Gaps: 7.69% Alignment: Query 42 GAGUUCCAUGGGUUGCAAAAUUAC----------UAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCA 120 || ||| | | | |||||| | | ||||||| || ||||| ||| |||| || ||| | || | || | | Sbjct 1396 GAACAACAUCGAUAGAAAAAUUCCCUCCCACCCUUCCCCUUUAAGAAUGAUAUAUGUAUAGUAUCAAUUUGACGUAUUUCUGCUGUCAA 1484 Query 121 GACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 | | | | | | | ||| || | | | | | | ||| ||| | Sbjct 1485 GUUUGUUUUUCAGAUCCAGACUGAU-ACAUUUACGGAGUCUCAGGCAUGUCAAC 1537 >> URS00025F1068_13489 Dicentrarchus labrax (European seabass) lncRNA (ENSDLAG00005026877.1) E-value: 7.9e+3 Identity: 58.70% Query coverage: 30.36% Gaps: 3.26% Alignment: Query 49 AUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUA 138 || ||| ||| | |||| || ||||| | | |||| || || | | || || | ||||||||||||| || Sbjct 874 AUCGGUC-AAAAGAUGCUAUUAUUGAAUUUAAACAAAGACAUUUGUCUCACAAAAGGAUCUAUAGGAGACCAGACUCUACUGG--ACCUG 960 Query 139 GA 140 || Sbjct 961 GA 962 >> URS00028636FA_9940 Ovis aries (sheep) lncRNA (ENSOARG00020027068.1) E-value: 7.9e+3 Identity: 60.00% Query coverage: 22.11% Gaps: 4.29% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA---UAAAUGAACUUCUGAUUGUAAUUC 231 | |||||||||| ||| |||||| | | |||| | | | ||||| || || | | || Sbjct 742 GAGUGUGUAUGUGUGUACAUGGGUUAGCUGUUGCAGACACACACAGCAAAUGCUCUCUAGACCGGCACUC 811 >> URS0001993997_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00030002130.1) E-value: 8e+3 Identity: 58.11% Query coverage: 24.42% Gaps: 0.00% Alignment: Query 69 CCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUU 142 || | ||||| || |||| | | |||| | ||| | | ||||| | |||||| ||| | | Sbjct 223 CCAGGAGUUUUGAAAUUUACACAAUUUCCAGAUGACUCUCUUGAGAUCUUCGCACUCUAUGAUUCUGCAGGUCU 296 >> URS0000B45CDA_3981 Hevea brasiliensis miscellaneous RNA E-value: 8e+3 Identity: 58.43% Query coverage: 29.04% Gaps: 8.99% Alignment: Query 97 CAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGG-GCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 | ||||||| | || |||| || ||| |||| | ||| | | | || ||| |||| || ||| | ||| | || Sbjct 940 CUUAAGACCAACUU--GAAGCCCCGAUUCUUCUGCUAC-----ACUGGAGAAACCCUGAAAUAUUUGUUGUAUGUAUGUGUUUUCAGGA 1021 >> URS00022B0A69_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00000040632.3) E-value: 8e+3 Identity: 58.11% Query coverage: 24.42% Gaps: 0.00% Alignment: Query 69 CCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUU 142 || | ||||| || |||| | | |||| | ||| | | ||||| | |||||| ||| | | Sbjct 335 CCAGGAGUUUUGAAAUUUACACAAUUUCCAGAUGACUCUCUUGAGAUCUUCGCACUCUAUGAUUCUGCAGGUCU 408 >> URS0001986454_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00040018124.1) E-value: 8e+3 Identity: 58.11% Query coverage: 24.42% Gaps: 0.00% Alignment: Query 69 CCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUU 142 || | ||||| || |||| | | |||| | ||| | | ||||| | |||||| ||| | | Sbjct 227 CCAGGAGUUUUGAAAUUUACACAAUUUCCAGAUGACUCUCUUGAGAUCUUCGCACUCUAUGAUUCUGCAGGUCU 300 >> URS00022B40C5_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00000040632.3) E-value: 8e+3 Identity: 58.11% Query coverage: 24.42% Gaps: 0.00% Alignment: Query 69 CCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUU 142 || | ||||| || |||| | | |||| | ||| | | ||||| | |||||| ||| | | Sbjct 273 CCAGGAGUUUUGAAAUUUACACAAUUUCCAGAUGACUCUCUUGAGAUCUUCGCACUCUAUGAUUCUGCAGGUCU 346 >> URS00023DF590_4513 Hordeum vulgare (H. vulgare) long non-coding RNA (HVUL_LNC005837) E-value: 8.1e+3 Identity: 59.34% Query coverage: 30.03% Gaps: 7.69% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGU 242 | | || |||||||||||| ||| || || | || ||| | | || || ||| || |||| |||||| | Sbjct 61140 AUGUGUGGGGUGUGUGUAUGCAUGGGUUUGGCACA-AAGGCCCACCCUUGUGUAUAUCUACUCAUGCUUGU------AGCCUUGCAA 61219 Query 243 CCUG 246 ||| Sbjct 61220 GCUG 61223 >> URS000261D5BA_6596 Mercenaria mercenaria (Hard clam (quahog)) uncharacterized LOC123527093 E-value: 8.1e+3 Identity: 52.11% Query coverage: 43.56% Gaps: 7.75% Alignment: Query 43 AGUUCCAUGGGUUGCAAAAUUAC----------UAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAG 121 | ||| | | | |||||| | | ||||||| || ||||| ||| |||| || ||| | || | || | || Sbjct 2671 AACAACAUCGAUAGAAAAAUUCCCUCCCACCCUUCCCCUUUAAGAAUGAUAUAUGUAUAGUAUCAAUUUGACGUAUUUCUGCUGUCAAG 2759 Query 122 ACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 | | | | | | ||| || | | | | | | ||| ||| | Sbjct 2760 UUUGUUUUUCAGAUCCAGACUGAU-ACAUUUACGGAGUCUCAGGCAUGUCAAC 2811 >> URS0002421729_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC021778) E-value: 8.1e+3 Identity: 52.78% Query coverage: 63.04% Gaps: 14.81% Alignment: Query 65 CUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCC----CAGACUCUAC---------UGCGGUGCUA 138 ||| | | || | || || | | ||| |||||||||||||||||| || | |||| || || || | | Sbjct 71946 CUAGCAUGUACUC--CCUCGAUUCUAAAUAUAUAUAAGACCUUUUAGAGAUUCCAUUACUGACUAUAUAUAUCCGUAUGUAGU-CCA 72029 Query 139 GAUUGGGCAUCUCUUAAAACUUU---------GA---GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 ||| || | || | |||| || || || | | ||| || | | || | | || || | | |||| Sbjct 72030 UAUU-GGAAGCUGUAAAAAGUUCUUAUAUUUAGAAACGGAGGGAGUAGGUUUU---GGCAGUAUUAAUGUGAGGAUAUGCUUGAAUG 72112 Query 214 AACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCU 255 || | || | || | | ||| | | | ||| | | | Sbjct 72113 AAUUGCUUAGUGGUAAUAUAGAUACCUGGCAUGUUCCCUCCC 72154 >> URS00008BFD52_9606 Homo sapiens (human) non-protein coding lnc-EPRS-4:2 E-value: 8.2e+3 Identity: 62.16% Query coverage: 22.44% Gaps: 8.11% Alignment: Query 177 AUGUGUGAGGGUUAUCAGAUGCA------CAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCC 244 | ||| || ||| ||||| ||||| || ||| |||| ||||| |||||| | |||| | | Sbjct 227 GUUUGUAGAUGUCAUCUGAUGCCCAAAAGCAUUCAGAAAAAAAAACUGUUGAUUUUAAUUCCAUCCUUUCAACU 300 >> URS0000CCE65B_10116 Rattus norvegicus uncharacterized LOC103694008 E-value: 8.2e+3 Identity: 50.30% Query coverage: 47.19% Gaps: 18.93% Alignment: Query 42 GAGUUCCAUGGGUUGCAAAAUUA-------CUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACU 124 || ||||| ||| ||| | | ||| || | | ||| | ||| || | || | ||| | | | ||||||| Sbjct 294 CAGAGCCAUGCUUUGGAAACUCAGGGAAUCGAUUCCAUUCACUCUGCAACUCCCAUUCUCUUCA------CCUUUGGUGGUCUCCAGACU 377 Query 125 CUACUGCGGUGCU---AGAUUG-------GGCAUCUCUUAAAACUU---------UGAGGUGUGUGUAUGUAUGUGUGA 184 || ||| | | || | ||| | || | || ||||||||| ||| |||||| Sbjct 378 CUUCUGGAAGGAUCCCUGAAUAUCAUGCUGGCUCUUGCUAGACAAGUGAUUUGGCUGUGGUGUGUGUGUGUGUGUGUGU 456 >> URS00023771D9_57918 Fragaria vesca (wild strawberry) long non-coding RNA (FVES_LNC000883) E-value: 8.2e+3 Identity: 63.64% Query coverage: 27.06% Gaps: 6.82% Alignment: Query 28 AUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUA-----CUAUCCUU-UAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUU 109 | ||||||||| | || || |||| |||||||| || |||| || + |||| |||| | ||||| |||| | || Sbjct 981 AGCUUGAUGAAGAGGAUUUUCAUGAUGAGCAAAAUUCUGUUGCUCGCCUUAUACACAUGCUUUAUAAUGAUGAUCCAGAAGAAAUGUU 1068 >> URS00023CA45E_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC020136) E-value: 8.3e+3 Identity: 59.42% Query coverage: 21.78% Gaps: 4.35% Alignment: Query 170 UGUAUGUAUGUG---UGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGC 235 ||||| || || |||| || || | |||||| ||| || |||| |||||| || Sbjct 16484 CGUAUGGGCAUGUGAUGGUGGUUUUCUCUUGAUCUUUCGGAGCAAUCAAAAUCUGGUUGUAACCUGAGU 16552 >> URS0002391FAC_4100 Nicotiana benthamiana (N. benthamiana) long non-coding RNA (NBEN_LNC020136) E-value: 8.3e+3 Identity: 59.42% Query coverage: 21.78% Gaps: 4.35% Alignment: Query 170 UGUAUGUAUGUG---UGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGC 235 ||||| || || |||| || || | |||||| ||| || |||| |||||| || Sbjct 16484 CGUAUGGGCAUGUGAUGGUGGUUUUCUCUUGAUCUUUCGGAGCAAUCAAAAUCUGGUUGUAACCUGAGU 16552 >> URS0001962CC7_56716 Cottoperca gobio (channel bull blenny) lncRNA (ENSCGOG00000004738.1) E-value: 8.3e+3 Identity: 56.04% Query coverage: 26.40% Gaps: 12.09% Alignment: Query 104 CCUUUUAGA-------GAUG-CCCAGACUCUACUGCGGUGC---UAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGU 182 |||| || || | | ||| ||| | | | ||| |||| | ||| | || | |||||||| ||| ||||| Sbjct 241 ACUUUAAGGAAGACAGGACGCCACAGUCUCCAUUCAGCUGCGGAUAGACCAGCUGCAGCUUUAUACGUGUGUGUGUGUGUGUGUGUGUGU 330 Query 183 G 183 | Sbjct 331 G 331 >> URS0000ED3298_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 8.3e+3 Identity: 50.68% Query coverage: 44.55% Gaps: 16.44% Alignment: Query 144 GGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG--GGUUAUCAGAUGCACAUUCG---------GAUAAAUGAACU 217 | ||| || ||| | ||||||||| ||| ||||| | || || |||| | | | | | || || | || Sbjct 26471 GCAGUCUGCAAAUACUGGGUGGUGUGUGUGUGUGCGUGUGUGCGUGUGAU-UGAUGUAUAGUUGGUACAUCAUGUUAUAUUAGCU 26554 Query 218 UCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUGA 278 || | | | || |||| | || | |||||||| ||| Sbjct 26555 UCAGGUGUGCAACAUA------------GUGAUUCACCGUCUCUAAUACGUUAUUCUGUGC 26603 >> URS00008BFC1B_9606 Homo sapiens (human) non-protein coding lnc-OR4F16-15:1 E-value: 8.4e+3 Identity: 50.91% Query coverage: 32.34% Gaps: 24.55% Alignment: Query 80 GCUAUAUA----CAUAC--------UAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAAC 158 |||+| | ||||| || ||| ||| ||+||| || | | || || || | | |||||||| | | | Sbjct 589 CCUACAAAAGAGCAUACCUCUUCUGUAACCAGAAGGCCCUUUUGAUUAGUCAAGGCUGGACAG---AGUGAGAUUGGGUGUGUGUG----- 671 Query 159 UUUGAGGUGUGUGUAUGUA 177 ||||||| ||| Sbjct 672 -------UGUGUGUGUGUG 683 >> URS00009B2D37_10090 Mus musculus long non-coding RNA NONMMUT057133.2 E-value: 8.4e+3 Identity: 70.91% Query coverage: 17.49% Gaps: 3.64% Alignment: Query 167 GUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU--AAAUGAACUUC 219 |||||| ||| |||||| | || || |||||||| | || || |||||| Sbjct 125 GUGUGUGUGUGUGUGUGUGUGUGUGCAUAUGCACAUGCACAUGCUAAAGAACUUG 179 >> URS0000EAAADE_9606 Homo sapiens (human) HSALNT0119394 E-value: 8.5e+3 Identity: 61.70% Query coverage: 15.51% Gaps: 4.26% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUG 197 | ||| |||| ||| ||||||||||||||| | || Sbjct 1992 GUAUGAACCACAGCGUGUUUGUGUGUAUGUGUGAGGGUGGACG--UG 2036 >> URS0000EB2588_9606 Homo sapiens (human) HSALNT0119393 E-value: 8.5e+3 Identity: 61.70% Query coverage: 15.51% Gaps: 4.26% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUG 197 | ||| |||| ||| ||||||||||||||| | || Sbjct 3315 GUAUGAACCACAGCGUGUUUGUGUGUAUGUGUGAGGGUGGACG--UG 3359 >> URS0000EA0625_9606 Homo sapiens (human) HSALNT0119392 E-value: 8.5e+3 Identity: 61.70% Query coverage: 15.51% Gaps: 4.26% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUG 197 | ||| |||| ||| ||||||||||||||| | || Sbjct 3181 GUAUGAACCACAGCGUGUUUGUGUGUAUGUGUGAGGGUGGACG--UG 3225 >> URS000261F295_27405 Penaeus japonicus (Kuruma shrimp) small nucleolar RNA SNORA23 E-value: 8.5e+3 Identity: 75.00% Query coverage: 15.51% Gaps: 2.08% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAU-CAGAUGCACAUUCGGAUAAA 211 |||||||| |||||||||| | ||||| || | |||| | ||| | Sbjct 30 GUGUGUGUGUGUAUGUGUGUGUGUUAUACACACACACACACACAUACA 77 >> URS0000E9B56A_9606 Homo sapiens (human) HSALNT0032795 E-value: 8.6e+3 Identity: 58.09% Query coverage: 43.23% Gaps: 8.82% Alignment: Query 170 UGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCC-----UUCCGUCCUGUGACAUUCU 255 | ||| | ||||||||| ||| ||| | | || | | |||||| | ||||||| | || ||| || | | | || Sbjct 159 UUUAUCUUCGUGUGAGGGC--UCAAAUGAAGAAUCAGGAACCGGAACUUGAGGUUGUAAUGGAAACCGAAAAUUCAAGUCUUUUAUCUCCU 247 Query 256 GUGAUGUAGUCGUUAUUCAGUGAUAUAAUGAAUCUCACCUAUUGA 300 | | || | || ||| | ||||| ||||| |||| | Sbjct 248 G--GGGAAGGCCGUACCCAGGG---UAAUGCUUCUCAUUUAUUUA 287 >> URS00023493EE_9606 Homo sapiens (human) HSALNT0334584 E-value: 8.6e+3 Identity: 67.21% Query coverage: 20.13% Gaps: 6.56% Alignment: Query 202 UUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGU 262 | || ||||||||||||| || || |||| ||| ||||| ||| ||| ||| Sbjct 3188 CUGUGACAAAUGAACUUCUGUUU----UUUAAGCCAUCCUAUCUGUGGUAUUUUGUUAUGG 3244 >> URS000233CD3B_9606 Homo sapiens (human) HSALNT0334586 E-value: 8.6e+3 Identity: 67.21% Query coverage: 20.13% Gaps: 6.56% Alignment: Query 202 UUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGU 262 | || ||||||||||||| || || |||| ||| ||||| ||| ||| ||| Sbjct 9095 CUGUGACAAAUGAACUUCUGUUU----UUUAAGCCAUCCUAUCUGUGGUAUUUUGUUAUGG 9151 >> URS000241EC61_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC007863) E-value: 8.6e+3 Identity: 53.47% Query coverage: 30.36% Gaps: 12.87% Alignment: Query 105 CUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGG---------CAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 ||||||||| || | || | || | || || |||| |||||| |||| ||| ||| ||||| Sbjct 9154 GUUUUAGAGACA--CAAAAUCCAUG--GGAAAUGCAUCAGGUACCAUCCACAUCAACCUUAACUUUUUGGUGCGUGCGUGUGCGUGUGC 9238 Query 185 GGGUUAUCAGAU 196 | |||| | | Sbjct 9239 GUGUUAGCUUUU 9250 >> URS0002402677_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC003322) E-value: 8.6e+3 Identity: 50.79% Query coverage: 54.79% Gaps: 17.99% Alignment: Query 24 CACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCU-UUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUU 107 ||||||| || | | | || || | ||| || | | || | || ||||| | | || ||| ||| Sbjct 168638 CACAAUCCUGCUCA-CCCAAGGACCGAGAUUUGUAACACCGCAAUGUUGUUUAUUUUUCCA--AACGCACUGA--------CCUG 168711 Query 108 UUAGAGAUGC----CCAGACUCUACUGCGGUGCUAGAUUGG--------------GCAUC---UCUUAAAACUUUGAG-GUGUGU 170 | | | || | || || || || || | ||| | ||||||| ||| | |||||| Sbjct 168712 GUCAAUUGGUCCAACCCAAGUCCACAGCACUGUCGAAUAUGUUUCUAUUUAUAUACCAUUUAUUUUUAAAACCUUGUGUGUGUGU 168796 Query 171 GUAUGUAUGUGUGAGGGUU 189 || ||| |||||| | || Sbjct 168797 GUGUGUGUGUGUGUGUGUG 168815 >> URS0000D58D55_9606 Homo sapiens (human) non-protein coding ENTPD3-AS1:22 E-value: 8.7e+3 Identity: 52.00% Query coverage: 20.79% Gaps: 17.33% Alignment: Query 115 UGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG------------GUGUGUGUAUGUA 177 ||| | |||| | | || | || ||| || | || ||| || |||||||| ||| Sbjct 334 UGC-CCAACUCCUCAGUAGUACAAGUUUGUCCAACACUCCAAAUGCCUAGAUAGGCUUUUGUGUGUGUGUGUGUG 407 >> URS00023F8A17_57577 Trifolium pratense (T. pratense) long non-coding RNA (TPRA_LNC002838) E-value: 8.7e+3 Identity: 59.72% Query coverage: 23.10% Gaps: 4.17% Alignment: Query 145 GCAUCUCUUAAAACUUUGAGGUGU--GUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGA 214 | ||||| | || ||| || || || | ||| | || | ||| | |||| || | || | || | Sbjct 54100 ACUUCUCUCAUAAGAUUGUGGGGUAUGUUUCUGUGUCUGC-AAGGUCACCAGACGCGCGUUUUUUUGAAGCA 54170 >> URS00022B0E50_9555 Papio anubis (olive baboon) lncRNA (ENSPANG00000044108.1) E-value: 8.7e+3 Identity: 56.84% Query coverage: 31.35% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU 208 ||| | | ||||| ||| || | +| + || | |||||||| ||| + |||||||||| |+| | || |+| || Sbjct 1200 AGAAUUUGCUGCGAACCUACAUGAUGUGCCGACAUAAUUUAUGAGGUGUAUGUGCUUAUGUGUGAGUUUCAACCAUGGCUAACUGAAAU 1288 Query 209 AAAUGA 214 || || Sbjct 1289 GAAAGA 1294 >> URS00026B38B0_74358 Podarcis lilfordi non-coding RNA E-value: 8.8e+3 Identity: 69.77% Query coverage: 14.19% Gaps: 0.00% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 | ||||||||| ||| |||||| | || || | |||| | Sbjct 10 GGGGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACAC 52 >> URS00027D5390_74358 Podarcis lilfordi non-coding RNA E-value: 8.8e+3 Identity: 59.30% Query coverage: 26.07% Gaps: 8.14% Alignment: Query 100 AAGACCUUUUAGAGAUGCCCAGACUC---UACUGCGGUGCUA-GAUUGGGCAUCUCUUAAAACUUUGAG---GUGUGUGUAUGUAU 178 |||||||| |||+ |||| || | || |||| | |||||| || + || | || | |||||||| ||| | Sbjct 2533 GCAACCUUUUACAGACACCCACGAUCCUUUUUUGUGGUGGAAGGAUUGGACAAGCAGGGCAAGUGUGUGUGUGUGUGUGUGUGUGU 2618 >> URS000218333F_9305 Sarcophilus harrisii (Tasmanian devil) lncRNA (ENSSHAG00000028911.1) E-value: 3.4e+3 Identity: 61.17% Query coverage: 33.33% Gaps: 5.83% Alignment: Query 78 UUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUG--GGCAUCUCUUAAAACUUUGAGGU 166 |||| |||| || ||| | || ||| | | | || ||| || || |||||| || | | | || ||| || | || ||| Sbjct 640 AUGCUGUAUAGAUGCUACCAAUUAGAAUUCUGCGGUCUGUCCAUACAUUA----GGUGCUGUAUAGAUGCUACCUAUUAGAAUUCUGUGGU 726 Query 167 GUGUGUAUGUAU 178 || |||| || Sbjct 727 CUGGGUAUACAU 738 >> URS0000B2C815_10116 Rattus norvegicus long non-coding RNA NONRATT029416.2 E-value: 8.9e+3 Identity: 61.40% Query coverage: 18.81% Gaps: 7.02% Alignment: Query 133 GUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU 189 | || || | || | |||| |||||||||| ||| |||||||| | Sbjct 636 GAGCCAGUCUAGGUG----UGUAAACACAAAGGUGUGUGUGUGUUUGUGUGAGAGAG 688 >> URS00022B8174_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00000056718.1) E-value: 8.9e+3 Identity: 55.12% Query coverage: 40.59% Gaps: 6.30% Alignment: Query 88 CAUACUAUCCAUAAGACCUU---UUAGAGAUGCCCAGACUCUACUG-CGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGU 172 | | | || |||| || | |||| || |||| || | | ||||| | || | | |||| || ||| Sbjct 2580 CUCAAGACCCUCAAGAUCUCGAGAUCGAGAGUUGCAUGCUCUUUUGACUGAGCUAGCUAGGCAC----UCCAUGGUUUGUUUAGUUUGU 2664 Query 173 AUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 ||| |||||| | || || | || |||| | ||| Sbjct 2665 GUGUGUGUGUGUGUGUGAUAAAAUAUACAUAAGAAUAU 2702 >> URS0000EC73A5_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 8.9e+3 Identity: 69.23% Query coverage: 21.45% Gaps: 1.54% Alignment: Query 124 UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 || |||| | ||||| |||| ||| | || |||||||||| | || |||||| |||| Sbjct 90392 UCAUCUGCAGCACUAGACUGGGUCUCUUCU-GUGCUCUGAGGUGUGUAUGCGUGUGUGUGGGGGU 90455 >> URS00022B2140_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00845000655.1) E-value: 8.9e+3 Identity: 55.12% Query coverage: 40.59% Gaps: 6.30% Alignment: Query 88 CAUACUAUCCAUAAGACCUU---UUAGAGAUGCCCAGACUCUACUG-CGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGU 172 | | | || |||| || | |||| || |||| || | | ||||| | || | | |||| || ||| Sbjct 2581 CUCAAGACCCUCAAGAUCUCGAGAUCGAGAGUUGCAUGCUCUUUUGACUGAGCUAGCUAGGCAC----UCCAUGGUUUGUUUAGUUUGU 2665 Query 173 AUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 ||| |||||| | || || | || |||| | ||| Sbjct 2666 GUGUGUGUGUGUGUGUGAUAAAAUAUACAUAAGAAUAU 2703 >> URS00027AD0ED_74358 Podarcis lilfordi non-coding RNA E-value: 9e+3 Identity: 63.64% Query coverage: 13.86% Gaps: 4.55% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUG--UGAGGGUUAUCAGAUGCACAU 202 | |||||||| ||| |||| || | || || | |||| Sbjct 7 UUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACAC 50 >> URS000196763D_9823 Sus scrofa (pig) lncRNA (ENSSSCG00065077258.1) E-value: 9e+3 Identity: 68.52% Query coverage: 17.82% Gaps: 7.41% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 | | +|||||||||||| ||| |||||| || |||||||| | | | | Sbjct 3530 AGAG--CUGAGGUGUGUGUGUGUGUGUGUGU--GUGUUCAGAUGCUCUUACCAA 3579 >> URS0001961EB3_9823 Sus scrofa (pig) lncRNA (ENSSSCG00055017651.1) E-value: 9e+3 Identity: 68.52% Query coverage: 17.82% Gaps: 7.41% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 | | +|||||||||||| ||| |||||| || |||||||| | | | | Sbjct 3533 AGAG--CUGAGGUGUGUGUGUGUGUGUGUGU--GUGUUCAGAUGCUCUUACCAA 3582 >> URS00019768C0_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035051676.1) E-value: 9e+3 Identity: 68.52% Query coverage: 17.82% Gaps: 7.41% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 | | +|||||||||||| ||| |||||| || |||||||| | | | | Sbjct 3529 AGAG--CUGAGGUGUGUGUGUGUGUGUGUGU--GUGUUCAGAUGCUCUUACCAA 3578 >> URS000286250A_9940 Ovis aries (sheep) lncRNA (ENSOARG00020027068.1) E-value: 9e+3 Identity: 59.42% Query coverage: 21.78% Gaps: 4.35% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA---UAAAUGAACUUCUGAUUGUAAUU 230 | |||||||||| ||| |||||| | | |||| | | | ||||| || || | | | Sbjct 666 GAGUGUGUAUGUGUGUACAUGGGUUAGCUGUUGCAGACACACACAGCAAAUGCUCUCUAGACCGGCACU 734 >> URS0001D01234_317549 Paramuricea clavata non-coding RNA E-value: 9e+3 Identity: 59.26% Query coverage: 33.99% Gaps: 4.63% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA--UGCAC---AUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCU 237 |||| | | | || | ||| |||||||| | | ||| | |||| || | | | | | ||||| || |||| | | Sbjct 54 UAAACGUGCAAGCGUAUAUAUAUAUGUGUGUGUUAUCUCACAAUUGCAAGCUAUCCUUACACGAGUAAUUCUGGUUUGGUUUCUCCCUU 142 Query 238 UCCGUCCUGUGACAUUCUG 256 | || |||| ||| ||| Sbjct 143 UACGCCCUGGAACAAUCUC 161 >> URS0000EDC842_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 9e+3 Identity: 50.00% Query coverage: 34.32% Gaps: 16.04% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUU--AAAACUUUGAGGUGUGUGUAUGU 176 || | |||| || | || ||| | |||||||| | | | || |||||||| ||| Sbjct 111509 CCUUGCUCCCUU------------CAACCCAACCCAAGUGGUUUCUUGGGCAUUUUUAUCAUGCCUC---UGUGUGUGUGUGU 111576 Query 177 AUGUGUGAGGGUUAUCAGAUGCA 199 |||||| | | || ||| Sbjct 111577 GUGUGUGUGUGCAUGCACAUGAG 111599 >> URS000194BD6F_9823 Sus scrofa (pig) lncRNA (ENSSSCG00045023328.1) E-value: 9.1e+3 Identity: 68.52% Query coverage: 17.82% Gaps: 7.41% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 | | +|||||||||||| ||| |||||| || |||||||| | | | | Sbjct 3526 AGAG--CUGAGGUGUGUGUGUGUGUGUGUGU--GUGUUCAGAUGCUCUUACCAA 3575 >> URS000196A4A5_9823 Sus scrofa (pig) lncRNA (ENSSSCG00015067893.1) E-value: 9.1e+3 Identity: 68.52% Query coverage: 17.82% Gaps: 7.41% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 | | +|||||||||||| ||| |||||| || |||||||| | | | | Sbjct 3528 AGAG--CUGAGGUGUGUGUGUGUGUGUGUGU--GUGUUCAGAUGCUCUUACCAA 3577 >> URS00025E6C8D_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000115629.1) E-value: 9.1e+3 Identity: 53.68% Query coverage: 29.70% Gaps: 10.53% Alignment: Query 91 ACUAUCCAUAAGACCUUUUAGAG-----AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 | ||||| ||| || | || || |||| |||| || || | | ||| | || | |||||||| ||| Sbjct 545 AUGAUCCAACAGAUCUCCUUUAGCCCUUAUAUAUAGACACUACACCGCCCAUACAAGG-GCAGAC----ACACGUGUGUGUGUGUGUGUGU 630 Query 177 AUGU 180 ||| Sbjct 631 GUGU 634 >> URS0000E9AB2A_9606 Homo sapiens (human) HSALNT0287228 E-value: 9.2e+3 Identity: 55.12% Query coverage: 39.27% Gaps: 15.75% Alignment: Query 100 AAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCU----AGAUUGGGCAUCUCUUAAAACUUUGAG---GUGUGUGUAUGUAUGUG 181 ||||| |||| || ||| |||| ||| || || || | | || | |||||||| ||| |||| Sbjct 8496 GGGACCUCCUAGAAAUA-----------CUGUCUUGCUCCAAAGAAGGGACAGCUUGUGGUGGUGUGCGUGUGUGUGUGUGUGUGUGUG 8573 Query 182 UGAGGG-UUAUCAGAUGCACAUUCGGAUAAAUGAACUU 218 ||| || | || | || || || | |||| ||| Sbjct 8574 UGAAGGGUGUGCAUUUCCAGCAUC-GAAAUAUGAGCUU 8610 >> URS0000E963FD_9606 Homo sapiens (human) HSALNT0287229 E-value: 9.2e+3 Identity: 55.12% Query coverage: 39.27% Gaps: 15.75% Alignment: Query 100 AAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCU----AGAUUGGGCAUCUCUUAAAACUUUGAG---GUGUGUGUAUGUAUG 179 ||||| |||| || ||| |||| ||| || || || | | || | |||||||| ||| || Sbjct 11231 GGGACCUCCUAGAAAUA-----------CUGUCUUGCUCCAAAGAAGGGACAGCUUGUGGUGGUGUGCGUGUGUGUGUGUGUGUGUG 11306 Query 180 UGUGAGGG-UUAUCAGAUGCACAUUCGGAUAAAUGAACUU 218 ||||| || | || | || || || | |||| ||| Sbjct 11307 UGUGAAGGGUGUGCAUUUCCAGCAUC-GAAAUAUGAGCUU 11345 >> URS0002609A40_6687 Penaeus monodon (Black tiger shrimp) small nucleolar RNA SNORA23 E-value: 9.2e+3 Identity: 66.07% Query coverage: 18.48% Gaps: 0.00% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAAC 216 || ||||||||| ||| |||||| | || || | ||||| | | | | | | Sbjct 30 UGUGGUGUGUGUGUGUGUGUGUGUGUGUGUACAUACGCACACACACACACACAACC 85 >> URS000275E87B_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 9.2e+3 Identity: 74.42% Query coverage: 14.19% Gaps: 4.65% Alignment: Query 141 UUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUG 183 | ||+|| ||||| || |||||||||||| | | |||||| Sbjct 2066 U--UACACCUUUUAAAGCUGUGAGGUGUGUGUGUAUGUGUGUG 2106 >> URS0002403ADE_3067 Volvox carteri (V. carteri) long non-coding RNA (VCAR_LNC002883) E-value: 9.2e+3 Identity: 52.54% Query coverage: 35.97% Gaps: 17.80% Alignment: Query 80 GCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAG-AUUGGGC-AUCUCU------U-AAAA 157 || |||||||| | |||| | |||| ||| | || | || || ||| | ||| Sbjct 53446 CGUACAUACAUACGGCAAAACCGACCCAAGU-----------GCGCUACCGCGCGGUGAGUAGUGUGCCUUCUUGUUUGUGUAUAAA 53521 Query 158 CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 | | | |||||||||||||||| ||||| Sbjct 53522 AUAU-GCGCGUGUGUAUGUAUGUGUAAGGGU 53551 >> URS000238FF8A_59689 Arabidopsis lyrata (A. lyrata) long non-coding RNA (ALYR_LNC002867) E-value: 9.3e+3 Identity: 56.76% Query coverage: 35.97% Gaps: 1.80% Alignment: Query 149 CUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU--AUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCU 232 || | | | || || | |||| |||| | | ||| ||| |||||||| | || | ||| | |||| || Sbjct 10665 CUUUCGAUGACUAGAAAUGCAUCUAUGAAUGUCUUAAGGUGGCUUCACAUGCACAUCACAAAAACGUAGCUUGAUAAUGUAUUUAC 10750 Query 233 AGCCUUCCGUCCUGUGACAUUCUGU 257 ||| | | || || ||||| | Sbjct 10751 UGCCCUUCAUCAUGAAACAUUAGAU 10775 >> URS00009BDBB8_10090 Mus musculus long non-coding RNA NONMMUT111702.1 E-value: 9.4e+3 Identity: 67.27% Query coverage: 18.15% Gaps: 0.00% Alignment: Query 159 UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 | | |||||||| ||| |||||| | || || |||||||| || | || Sbjct 56 GCUCACGUGUGUGUGUGUGUGUGUGUGUGUGUGCACAUGCACAUGCGCUUGUGUG 110 >> URS00009B9297_10090 Mus musculus long non-coding RNA NONMMUT044365.2 E-value: 9.4e+3 Identity: 67.27% Query coverage: 18.15% Gaps: 0.00% Alignment: Query 159 UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 | | |||||||| ||| |||||| | || || |||||||| || | || Sbjct 56 GCUCACGUGUGUGUGUGUGUGUGUGUGUGUGUGCACAUGCACAUGCGCUUGUGUG 110 >> URS0000811F8A_10090 Mus musculus (mouse) predicted gene 43189 E-value: 9.4e+3 Identity: 67.27% Query coverage: 18.15% Gaps: 0.00% Alignment: Query 159 UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 | | |||||||| ||| |||||| | || || |||||||| || | || Sbjct 56 GCUCACGUGUGUGUGUGUGUGUGUGUGUGUGUGCACAUGCACAUGCGCUUGUGUG 110 >> URS0002714E56_74358 Podarcis lilfordi non-coding RNA E-value: 9.4e+3 Identity: 66.67% Query coverage: 13.86% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 |||||||| ||| |||||| | || || | |||| | Sbjct 15 UGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACA 56 >> URS0002773178_74358 Podarcis lilfordi non-coding RNA E-value: 9.5e+3 Identity: 48.97% Query coverage: 46.53% Gaps: 19.31% Alignment: Query 117 CCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 || | || || | | | || || | | |||||||||| ||| |||||| | || Sbjct 47 GGCAAAUUCAUCUCCUGCACAGCUCUGCCCAAAUUCAA------AAAGGUGUGUGUGUGUGUGUGUGUGUGUG----------------- 113 Query 207 AUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGU----CCUGUGACAUUCUGU 257 | ||| |||| ||||| | || ||| || |||| | ||||||| Sbjct 114 -UGUGUGAGCUUCCAAUUGUUACACUUUUUUUCUGUCAACCCUGGGUCAUUCUGC 167 >> URS00027562F3_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 9.5e+3 Identity: 58.57% Query coverage: 19.14% Gaps: 17.14% Alignment: Query 146 CAUCUCUUAAAACUUUGAG-----------GUGUGUGUAUGUAUGUGUGAGGGU-UAUCAGAUGCACAUU 203 |||| | |||| || | |||||||| ||| |||||| | || | ||| || ||| Sbjct 34491 CAUCAUACAGAACUCUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGGACAAGACGCCCAUA 34560 >> URS0002864E8E_9940 Ovis aries (sheep) lncRNA (ENSOARG00020039013.1) E-value: 9.5e+3 Identity: 53.77% Query coverage: 33.33% Gaps: 20.75% Alignment: Query 171 GUAUGUAUGUGUGAGGGUUAUCAGAUGCA-----CAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUG 256 || ||| |||| ||||||| |||| ||| |||| | || |||||| | | | | ||| ||| Sbjct 665 GUGUGUCUGUGAGAGGGUUUCCAGAAGCAAUUAACAUUUGAAUUGGUGAACUGAGUAAGGCAGA--UUGCCCUCC---------------C 738 Query 257 UGAUGUAGUCGUUAU 271 | |||||| ||| | Sbjct 739 UAAUGUAGGCGUGCU 753 >> URS000272D013_74358 Podarcis lilfordi non-coding RNA E-value: 9.5e+3 Identity: 69.77% Query coverage: 14.19% Gaps: 0.00% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 | ||||||||| ||| |||||| | || || | |||| | Sbjct 9 GGGGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACAC 51 >> URS00023D6375_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC004795) E-value: 9.5e+3 Identity: 65.57% Query coverage: 17.82% Gaps: 11.48% Alignment: Query 176 UAUGUGUGAGGGUUAUCAGAUGCACAUUCG-------GAUAAAUGAACUUCUGAUUGUAAU 229 || ||||| || | || ||||||| |||| || | ||||| | | || |||| | Sbjct 52241 GAUAUGUGAUGGAUCUCCGAUGCACUUUCGAAGCAUUGACACAUGAAAUACCGAAUGUACU 52301 >> URS00027C679C_74358 Podarcis lilfordi non-coding RNA E-value: 9.6e+3 Identity: 71.11% Query coverage: 14.85% Gaps: 0.00% Alignment: Query 147 AUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAU 191 | ||||| ||||| | |||||||| ||| |||||| | || Sbjct 450 AAAACUUAACACUUUUAUGUGUGUGUGUGUGUGUGUGUGUGUGUG 494 >> URS00025F313B_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000115629.1) E-value: 9.6e+3 Identity: 53.68% Query coverage: 29.70% Gaps: 10.53% Alignment: Query 91 ACUAUCCAUAAGACCUUUUAGAG-----AUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 | ||||| ||| || | || || |||| |||| || || | | ||| | || | |||||||| ||| Sbjct 137 AUGAUCCAACAGAUCUCCUUUAGCCCUUAUAUAUAGACACUACACCGCCCAUACAAGG-GCAGAC----ACACGUGUGUGUGUGUGUGUGU 222 Query 177 AUGU 180 ||| Sbjct 223 GUGU 226 >> URS0002428070_57918 Fragaria vesca (wild strawberry) long non-coding RNA (FVES_LNC000704) E-value: 9.6e+3 Identity: 68.33% Query coverage: 19.80% Gaps: 1.67% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAA 215 | |+||| ||| |||| |||+|+ || | |||| ||||||| | || |||||| || Sbjct 188839 ACCCUUGUGGU-UGUGGAUGCACAUGAGUGGGUGAUCAGAUCUAGAUAUGGAUAAUUGGG 188897 >> URS00019A0E61_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00040019267.1) E-value: 9.7e+3 Identity: 64.79% Query coverage: 23.43% Gaps: 2.82% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUG 221 ||||||| || |||||||| ||| |||||| | || | | |||||| | |||| | ||| Sbjct 1229 UUUAAAACCGUGU-GUGUGUGUGUGUGUGUGUGUGUGU-CCAAUACGCACAUAAACACGAAUGUGCAACUG 1297 >> URS00028081A0_36100 Haliotis rubra (Blacklip abalone) uncharacterized LOC124265614 E-value: 9.7e+3 Identity: 61.02% Query coverage: 38.28% Gaps: 10.17% Alignment: Query 168 UGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUU--CU 255 || |||| | |||| | ||||| |||| |||| | || || ||||| ||| || | | |||| || | | Sbjct 267 UGCCUAUGCAAGUGUUUG---UAUCAAAUGCC--AUCGGUU-----CACAUCACCUUGUAUCAUCAGCAUUUCAUGAUGUGUCAAUAAUU 346 Query 256 GUGAUGUAGUCGUUAUUCAGUGAUAUAA 283 ||||| ||||||| ||||| | || | | Sbjct 347 GUGAUAUAGUCGUAAUUCAAUAAUCUGA 374 >> URS00007FD8B8_7227 Drosophila melanogaster (fruit fly) long non-coding RNA:CR45267 (Dmel_CR45267) E-value: 9.8e+3 Identity: 68.09% Query coverage: 15.51% Gaps: 0.00% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU 208 | |||||||| ||| |||||| |||| |||| || | | | | Sbjct 3426 AAUGUGUGUGUGUGUGUGUGUGUGGGUGAUCACAUAGGUACACCGGU 3472 >> URS0001A1DE79_74940 Oncorhynchus tshawytscha (Chinook salmon) lncRNA (ENSOTSG00005003506.1) E-value: 9.8e+3 Identity: 63.89% Query coverage: 23.76% Gaps: 5.56% Alignment: Query 115 UGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 || |||||||||||| || | | | |||| | | | | | |||||||| ||| |||||| | Sbjct 655 UGGUCAGACUCUACUGAGG--CCAAACACGGCAGGUAUGUAU--GUCGGUGUGUGUGUGUGUGUGUGUGUGU 722 >> URS00026B79C1_74358 Podarcis lilfordi non-coding RNA E-value: 9.8e+3 Identity: 68.29% Query coverage: 13.53% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 |||||||| ||| |||||| | || || | |||| | Sbjct 21 GUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACA 61 >> URS00026DC13D_74358 Podarcis lilfordi non-coding RNA E-value: 9.8e+3 Identity: 67.44% Query coverage: 13.53% Gaps: 4.65% Alignment: Query 164 GGUGUGUGUAUGUAUGUG--UGAGGGUUAUCAGAUGCACAUUC 204 ||||||||| ||| |||| || | || || | |||| | Sbjct 7 GGUGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACAC 49 >> URS00009C3D89_10090 Mus musculus long non-coding RNA NONMMUT088782.1 E-value: 9.9e+3 Identity: 73.08% Query coverage: 15.51% Gaps: 11.54% Alignment: Query 76 UUUUGCUAUAUACAUACUAUCCAUAAGACCUUU-----UAGAGAUGCCCAGA 122 ||| ||||||||| |||||||||||| || | |||||| ||| || Sbjct 244 CUUUACUAUAUACAGACUAUCCAUAAGUUCUGUGACUCUAGAGAA-CCCGGA 294 >> URS0000D644C1_9597 Pan paniscus (bonobo) lncRNA (ENSPPAG00000044950.1) E-value: 9.9e+3 Identity: 51.72% Query coverage: 60.73% Gaps: 11.82% Alignment: Query 3 GCUGCGUGACAUCCAGUCCUACACAAUCUUGAUGAAAACGAGU------UCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA 85 |||||| |||| |||||| | | | ||| | || ||| ||| | | | | | || | | | | | Sbjct 1427 GCUGCGAUUUCCCCAGCCCUACAUAGGCACUAAAUAAAUGUGUGAUGCAUCCCUGGAUGGUCUCAGU--GAACCAUGUGCUGUAUCAAA 1513 Query 86 UACAUACUAUCCAUAA--GACCUU----UUAGAGA---UGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUU----AAAACUUU 161 |||| | | | || | |||| | ||| | ||| || ||||| | | || || | | | | ||| Sbjct 1514 UACAGAAUGCGGAAAACAGUCCUUAUCUUCAGAAAGCCUGCAGAG---AUACUGUGAAAAUGACCUGCUCAGUUUUAGGAAAUCAUUUU 1599 Query 162 GAGGUGUGUGUAUGUAUGUGUGAGG 186 | ||||||||| ||| |||||| | Sbjct 1600 GGGGUGUGUGUGUGUGUGUGUGUGU 1624 >> URS00022AEEC7_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00845008967.1) E-value: 9.9e+3 Identity: 67.27% Query coverage: 18.15% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUC 219 |||||||| ||| |||||| | || || |+ ||||+ | |||| ||| || Sbjct 1177 GUGUGUGUGUGUGUGUGUGUGUGUAUACACACACACACGCAUAUAAUGGAAUAUC 1231 >> URS00019E09CF_9995 Marmota monax (woodchuck) non-coding RNA E-value: 9.9e+3 Identity: 70.73% Query coverage: 13.53% Gaps: 0.00% Alignment: Query 155 AAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA 195 ||||| || |||| |||||||||||||| | || | Sbjct 947 AAACUGUGGUGUGUAUGUAUGUAUGUGUGUGUACACACACA 987 >> URS0000EB76A9_9606 Homo sapiens (human) HSALNT0168647 E-value: 1e+4 Identity: 58.89% Query coverage: 28.71% Gaps: 7.78% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG---GUGUGUGUAUGUAUGUG 181 || ||||| | | | | ||||| | || ||||||| |||| | |||| || | |||||||| || | ||| Sbjct 2628 ACACAAGACAGUGAAUUGGUCACCAGAACACAUAGCCCCAAAAGAUUGGCCAUC----AGAACUGUGUGUGUGUGUGUGUGUGCAAGUG 2712 Query 182 U 182 | Sbjct 2713 U 2713 >> URS0000DBB442_7955 Danio rerio (zebrafish) lncRNA CABZ01092746.1 (ENSDARG00000117319.1) E-value: 1e+4 Identity: 54.21% Query coverage: 59.41% Gaps: 8.95% Alignment: Query 8 GUGACAUCCAGUCCUACA--CAAUCU--UGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAU--UUUGCUAUAUACAUAC 92 |||| |||| | | ||| || || ||| || ||| || | | | ||| || | || | | | | | ||| Sbjct 800 GUGAAAUCCUGAACCACAAUCAUUCCUGUGAGGACGGAGAGAUCAGAGAGG-GAUUAAUAUCUGUGCUGCAGCAGCUCUCAGCAGAUUUAC 889 Query 93 UAUCCAUAAGACCUUUUAGAGAUGCCCAGAC-UCUACUGCGGUGC---UAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUG 179 | |||| ||| | | ||| | |||||| ||| |||| | ||| ||||| | | |||||||| ||| || Sbjct 890 CACUAAUAAAACCAGC-----AGGUCCAUUCAGCUACUGAUGUGUGAAUAGACUU-UAAUCAGGCAAAACCUGCACGUGUGUGUGUGUGUG 974 Query 180 UGUGAGGG 187 |||| | | Sbjct 975 UGUGUGUG 982 >> URS0000A793DA_60711 Chlorocebus sabaeus (African green monkey) miRNA (ENSCSAG00000027807.1) E-value: 1e+4 Identity: 69.23% Query coverage: 12.87% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 |||||||| ||| |||||| | || || | |||| Sbjct 38 UGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACAC 76 >> URS00023F26C2_4097 Nicotiana tabacum (common tobacco) long non-coding RNA (NTAB_LNC018944) E-value: 1e+4 Identity: 61.04% Query coverage: 25.41% Gaps: 5.19% Alignment: Query 95 UCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUG 171 ||| || | || | ||| ||||| | ||| || | ||||| | ||| ||| ||||| ||||| | Sbjct 50404 CUCAUUAGGGCCCUUCGGGAUUGUAAGACU--AGUGCUAUGU--AACCGGGCACCACUUUAAAAUUUGAAGUGUGGG 50476 >> URS0000CD7957_9601 Pongo abelii (Sumatran orangutan) lincRNA E-value: 1e+4 Identity: 60.23% Query coverage: 28.71% Gaps: 1.14% Alignment: Query 160 UUGAGGUGUGUGUAUGUAUGUGUGAGG-GUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUG 246 ||| ||| || | |||| | || | ||||| |||| | | ||||| || | ||||| | ||| | | ||| ||| Sbjct 1130 CUGAAUUGUCUGGAGACCUGUGAGUGGAGGUAUCAAAUGCGCCUCUGGAUAUAUAGAAUUCUGGUGUGGCUUCAGGACGUCCAGACUG 1217 >> URS00027F719A_9796 Equus caballus (horse) lncRNA (ENSECAG00000045323.1) E-value: 1e+4 Identity: 55.71% Query coverage: 23.10% Gaps: 14.29% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUC 231 |||||||| ||| |||||| | || | || || | | | | | | ||||||| | Sbjct 1561 CUUGUGUGUGUGUGUGUGUGUGUGUGUAAACACGUGUAUACACUAA----------ACAGGUUGUAAUCC 1620 >> URS0000B2D8F9_10116 Rattus norvegicus long non-coding RNA NONRATT031447.1 E-value: 1e+4 Identity: 62.96% Query coverage: 24.09% Gaps: 9.88% Alignment: Query 133 GUGCUAGAUUGGGCAUCUC-UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU-------UAUCAGAUGCACAUUCG 205 ||||||||| || | | |||| | |||||||| ||| |||||| | || | ||||| | ||||| | Sbjct 877 AUGCUAGAUUAAACAGCAUGAUGAAACAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCAUUUCAGAAGUACAUUGG 957 >> URS0000E3E389_7266 Drosophila guanche non-coding RNA E-value: 1e+4 Identity: 60.61% Query coverage: 21.78% Gaps: 0.00% Alignment: Query 168 UGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUA 233 | || | | || ||||| | | | |||| ||| || | | ||||| || |||| | || Sbjct 7980 CGGGUGUCUGUGCGUGAGCGGGCACGGCUGCAGCUUCAGAAAUUUCAACUUUUGCUUGUGUUGCUC 8045 >> URS0000E28EC2_7266 Drosophila guanche non-coding RNA E-value: 1e+4 Identity: 60.61% Query coverage: 21.78% Gaps: 0.00% Alignment: Query 168 UGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUA 233 | || | | || ||||| | | | |||| ||| || | | ||||| || |||| | || Sbjct 7991 CGGGUGUCUGUGCGUGAGCGGGCACGGCUGCAGCUUCAGAAAUUUCAACUUUUGCUUGUGUUGCUC 8056 >> URS00027BECE9_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 1e+4 Identity: 56.91% Query coverage: 40.26% Gaps: 7.32% Alignment: Query 150 UCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGC 235 |||| | || | | ||||||||||| |||| || | || |||| || | ||| || | ||||| || || ||| Sbjct 64673 ACUUAUAUCUAUAUGUGUGUGUGUAUGAAUGUAUGUGUGUG------UGCAUAUAUGUAUAUAU--AUGAUUGAUUCUAGUUUCAGC 64751 Query 236 CUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAU 271 ||| | ||| ||| | | | ||| Sbjct 64752 UCAUGAUCCGUGGCCAUGCUGGGGCACCGCCAUUAC 64787 >> URS0002792192_74358 Podarcis lilfordi non-coding RNA E-value: 1e+4 Identity: 69.77% Query coverage: 14.19% Gaps: 0.00% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUU 203 |||||||||||| ||| |||||| | || | | |||| Sbjct 2 UGAGGUGUGUGUGUGUGUGUGUGUGUGUGUACGUACACACACA 44 >> URS00026D9BCD_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1e+4 Identity: 60.56% Query coverage: 23.43% Gaps: 9.86% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGC 235 |||||||| |||||||||| | || || | | ||| || | | || ||||| | | | | Sbjct 56613 GUGUGUGUGUGUAUGUGUGUGUGUC-------UGACCUCCUGAUGAACCAGCCUCCGAUUGCUACCCCAUC 56676 >> URS0000E35774_7266 Drosophila guanche non-coding RNA E-value: 1e+4 Identity: 60.61% Query coverage: 21.78% Gaps: 0.00% Alignment: Query 168 UGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUA 233 | || | | || ||||| | | | |||| ||| || | | ||||| || |||| | || Sbjct 7960 CGGGUGUCUGUGCGUGAGCGGGCACGGCUGCAGCUUCAGAAAUUUCAACUUUUGCUUGUGUUGCUC 8025 >> URS00027032A2_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 1e+4 Identity: 53.38% Query coverage: 48.84% Gaps: 15.54% Alignment: Query 41 CGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUA 127 | | | | ||| | || || ||| | | | | |||||||||| ||| || | | | | ||| Sbjct 35655 CCAAAUUCCCGGGCCACUAAGCCACGCUCCAUCACUAAU-AUAUAUACAUA-UAUACACACAA------------ACAUACACUUAU 35727 Query 128 CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||||| | | ||| |||| | | | |||||||| || ||||||||| || Sbjct 35728 CUGCG-UAUACGUUUGUGCAUGUGUG--------UAUGUGUGUGUGUGCAUGUGUGAGUGU 35779 >> URS0002775A65_74358 Podarcis lilfordi non-coding RNA E-value: 1e+4 Identity: 71.70% Query coverage: 17.49% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU 217 |||||||| ||| ||||||+ | ||||| ||| ||| ||| |||| || Sbjct 121 GUGUGUGUGUGUGUGUGUGCAAGAUAUCAAAUGUACAGAUGGAAAAAUAGACA 173 >> URS00023F41AF_37334 Citrus maxima (C. maxima) long non-coding RNA (CMAX_LNC000142) E-value: 1e+4 Identity: 57.41% Query coverage: 35.64% Gaps: 8.33% Alignment: Query 137 UAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUU 224 ||| | |||||| || |||| || || | || ||||||||| || | | || || |||| || | | || Sbjct 5254 UAGUUGGGGCAUUAUUUCCAACUCGGAUACGU-------UGUGGGUGAGGGUUCUCUGUUCCAAAUAUGGAUU--GGACCCACCCAUG 5332 Query 225 GUAAUUCUAGCCUUCCGUCC 244 | || | ||||| ||| Sbjct 5333 CAAUUUGCCGUCUUCCCUCC 5352 >> URS00026BFFA3_74358 Podarcis lilfordi non-coding RNA E-value: 1e+4 Identity: 65.38% Query coverage: 17.16% Gaps: 0.00% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU 217 ||||||| ||| |||||| | | || || |||| | ||||| || Sbjct 11 UGUGUGUGUGUGUGUGUGUGUGAGCACACAUACACACACACAUAAACACACA 62 >> URS000275ABFE_74358 Podarcis lilfordi non-coding RNA E-value: 1e+4 Identity: 61.67% Query coverage: 18.48% Gaps: 6.67% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACA----UUCGGAUAAAUGAACUUCU 220 |||||||| ||| |||||| | || || | |||| | | | | |||||| Sbjct 26 GUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACACACACACACACACACUUCU 85 >> URS0000AAC537_59463 Myotis lucifugus (little brown bat) miRNA (ENSMLUG00000026372.1) E-value: 1e+4 Identity: 63.64% Query coverage: 18.15% Gaps: 0.00% Alignment: Query 155 AAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA 209 | || || |||||||||||| |||||| | || | |||| || | | Sbjct 20 AUACCUUUGUGUGUGUGUAUGUGUGUGUGUGUAAAUACACACACACACUCACACA 74 >> URS000273352A_74358 Podarcis lilfordi non-coding RNA E-value: 1e+4 Identity: 62.07% Query coverage: 19.14% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGA 222 |||||||| ||| |||||| | || || | |||| | | | | || | || Sbjct 14 GUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACACACACACACACGUAUGU 71 >> URS0002524863_9606 Homo sapiens (human) non-coding RNA E-value: 1.1e+4 Identity: 65.22% Query coverage: 22.77% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||||| | || || | | ||||||| ++|| |||||| | ||||| ||| |||||| | || Sbjct 2039 AGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 2107 >> URS0000EAEE28_9606 Homo sapiens (human) HSALNT0101633 E-value: 1.1e+4 Identity: 60.61% Query coverage: 30.03% Gaps: 11.11% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAG--CCUUCC------GUCC 244 || |||||||||||| |||||| | || || | | ||| || || || |||| | |||| | ||| | |||| Sbjct 262 GAUGUGUGUGUAUGUGUGUGUGUGUGUGUGUAG---GAGACAGUGAUGAAACAAACUCAGAUUAUGAUUCAGGGGUCUUUCUACCUUGUCC 349 Query 245 UGUGACAU 252 || | ||| Sbjct 350 UGGGCCAU 357 >> URS00025D6129_9606 Homo sapiens (human) non-coding RNA E-value: 1.1e+4 Identity: 65.22% Query coverage: 22.77% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||||| | || || | | ||||||| ++|| |||||| | ||||| ||| |||||| | || Sbjct 1429 AGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 1497 >> URS00025B9128_9606 Homo sapiens (human) non-coding RNA E-value: 1.1e+4 Identity: 65.22% Query coverage: 22.77% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||||| | || || | | ||||||| ++|| |||||| | ||||| ||| |||||| | || Sbjct 2257 AGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 2325 >> URS0000E9D558_9606 Homo sapiens (human) HSALNT0157382 E-value: 1.1e+4 Identity: 64.41% Query coverage: 19.47% Gaps: 0.00% Alignment: Query 146 CAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 | || | || ||| || | ||| ||| ||||||| | | || || |||| ||| Sbjct 5423 AAAUGCUGACCACCUUGUGGGGGCUGUGUGUGUGUGUGAAGCUCUUCUGAAGCACCUUC 5481 >> URS000252CF84_9606 Homo sapiens (human) non-coding RNA E-value: 1.1e+4 Identity: 65.22% Query coverage: 22.77% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||||| | || || | | ||||||| ++|| |||||| | ||||| ||| |||||| | || Sbjct 1656 AGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 1724 >> URS00025B6B0E_9606 Homo sapiens (human) non-coding RNA E-value: 1.1e+4 Identity: 65.22% Query coverage: 22.77% Gaps: 0.00% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||||| | || || | | ||||||| ++|| |||||| | ||||| ||| |||||| | || Sbjct 1569 AGACUAAAGAGCUAUGUGAAAAUGGGCAUUGGCCAAUACUUUGUGAAAUGUGUGUGUGUGUGUGUGUGU 1637 >> URS0000E03FF0_9627 Vulpes vulpes (red fox) lncRNA (ENSVVUG00000005636.1) E-value: 1.1e+4 Identity: 56.25% Query coverage: 42.90% Gaps: 13.89% Alignment: Query 56 GCAAAAUUACUAUCCUUUAAUUUUGCUAUAUAC---AUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUAC-UGCGGUGCUAGA 140 | ||||| ||| ||| | ||||| | || || | || | | ||| | |||| | ||| | | |||| ||| Sbjct 908 GGAAAAUGACU---CUUGGAAGUUGCUGCAAGUAUUAUGGAAUAGCUCGGAUCAUCAAGACGUUGCCAGUUUAUACAUCCUGUGCAAGA 993 Query 141 U----------UGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 | | || || | |||| ||||||||||| ||| |||||| | Sbjct 994 UGUGUGGGGCUGAGACAACUGUCAAAA---GGAGGUGUGUGUGUGUGUGUGUGUG 1045 >> URS000194B176_9823 Sus scrofa (pig) lncRNA (ENSSSCG00055026659.1) E-value: 1.1e+4 Identity: 51.97% Query coverage: 44.22% Gaps: 15.13% Alignment: Query 50 UGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU 134 || | ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | Sbjct 968 UGAGAAU--AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUG 1054 Query 135 ------GCUAGAUUGGGCAUCUCUUA-AAACUUUGAGGUGUG-------UGUAUGUAUGUGUG 183 | || || || |||| |||||| | |||||| ||| ||| |||||| Sbjct 1055 ACCUUGGUCAGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGGGUGUGUGUGUGUGUGUG 1114 >> URS000272A76F_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.1e+4 Identity: 64.29% Query coverage: 23.10% Gaps: 7.14% Alignment: Query 124 UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCA 193 | |||| || | +| | ||| | |+||||| | | ||||||||| ||| |||||| | || +|| Sbjct 28135 UUUACUACGUGGUCAAAAUGG----CACCUAAAAUAUAGUGGUGUGUGUGUGUGUGUGUGUGU-UUCCCA 28199 >> URS000234F55B_3983 Manihot esculenta (cassava) long non-coding RNA (MESC_LNC003475) E-value: 1.1e+4 Identity: 67.31% Query coverage: 17.16% Gaps: 7.69% Alignment: Query 224 UGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAG 275 | |||| ||| |||||| ||||||||| ||||| | ||| | || Sbjct 30396 CGGAAUU----CCUACCGUCCAGUGACAUUCGAGGAUGUCGGAGUUUUCUAG 30443 >> URS00027AA054_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.1e+4 Identity: 61.18% Query coverage: 28.05% Gaps: 8.24% Alignment: Query 100 AAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA 184 ||| | |||| | | |||| |||| || || | |||| ||||| | || | ||||||| ||| |||||| Sbjct 24316 AAGCUCAUUUAAAAACA-CCAGC----CCUGCAAUGAUACCCUCUGCAUUA-UUAAACGUGUGUG-UGUGUGUGUGUGUGUGUGU 24393 >> URS0002389DD1_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC000987) E-value: 1.1e+4 Identity: 66.13% Query coverage: 20.46% Gaps: 3.23% Alignment: Query 127 ACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 |||||||| ||| || | | || | | ||||| | |||||| | | ||||| || | Sbjct 427 GGUGCGGUGCGAGAGUGAACCUUUCAAAGCAGUUUGAAGAGUGUGU--GGAAGUGUGUGGCU 486 >> URS00023A1C2A_3983 Manihot esculenta (cassava) long non-coding RNA (MESC_LNC003476) E-value: 1.1e+4 Identity: 67.31% Query coverage: 17.16% Gaps: 7.69% Alignment: Query 224 UGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAG 275 | |||| ||| |||||| ||||||||| ||||| | ||| | || Sbjct 29930 CGGAAUU----CCUACCGUCCAGUGACAUUCGAGGAUGUCGGAGUUUUCUAG 29977 >> URS00025EEB9E_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000051917.1) E-value: 1.1e+4 Identity: 60.00% Query coverage: 26.40% Gaps: 1.25% Alignment: Query 125 CUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 || ||| | | ||| |||| | || | | | ||||||||||||| |||||| | ||| | | ||| Sbjct 1543 GGACAUACGUGUUGGUUUGUGCAUUUGUUGAGGC-AGGUGGUGUGUGUAUGUGUGUGUGUGUGUUUCCCACCACCCAUGA 1621 >> URS00027B01CF_74358 Podarcis lilfordi non-coding RNA E-value: 1.1e+4 Identity: 62.96% Query coverage: 17.82% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUU 218 |||||||| ||| |||||| | || || | |||| | | | | ||| Sbjct 13 GUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACACACACACACACUG 66 >> URS0001976BEF_9823 Sus scrofa (pig) lncRNA (ENSSSCG00055026659.1) E-value: 1.1e+4 Identity: 51.97% Query coverage: 44.22% Gaps: 15.13% Alignment: Query 50 UGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU 134 || | ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | Sbjct 1020 UGAGAAU--AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUG 1106 Query 135 ------GCUAGAUUGGGCAUCUCUUA-AAACUUUGAGGUGUG-------UGUAUGUAUGUGUG 183 | || || || |||| |||||| | |||||| ||| ||| |||||| Sbjct 1107 ACCUUGGUCAGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGGGUGUGUGUGUGUGUGUG 1166 >> URS00026C0F29_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.1e+4 Identity: 64.29% Query coverage: 23.10% Gaps: 7.14% Alignment: Query 124 UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCA 193 | |||| || | +| | ||| | |+||||| | | ||||||||| ||| |||||| | || +|| Sbjct 2045 UUUACUACGUGGUCAAAAUGG----CACCUAAAAUAUAGUGGUGUGUGUGUGUGUGUGUGUGU-UUCCCA 2109 >> URS00019596E6_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035026843.1) E-value: 1.1e+4 Identity: 51.97% Query coverage: 44.22% Gaps: 15.13% Alignment: Query 50 UGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU-- 134 || | ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | Sbjct 549 UGAGAAU--AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGAC 637 Query 135 ----GCUAGAUUGGGCAUCUCUUA-AAACUUUGAGGUGUG-------UGUAUGUAUGUGUG 183 | || || || |||| |||||| | |||||| ||| ||| |||||| Sbjct 638 CUUGGUCAGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGGGUGUGUGUGUGUGUGUG 695 >> URS000237D6D8_218851 Aquilegia coerulea (A. coerulea) long non-coding RNA (ACOE_LNC001155) E-value: 1.1e+4 Identity: 64.06% Query coverage: 21.12% Gaps: 0.00% Alignment: Query 48 CAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAG 111 | || | | ||| ||| | | || |||| || || | | ||| | |||||||| ||| | Sbjct 54869 CGUGUGAUAGUAAACUACCACCAGGCAACUUUGUUAAAUGCUUGCUAACGAUAAGACCAUUUUG 54932 >> URS00027427F5_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.1e+4 Identity: 64.29% Query coverage: 23.10% Gaps: 7.14% Alignment: Query 124 UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCA 193 | |||| || | +| | ||| | |+||||| | | ||||||||| ||| |||||| | || +|| Sbjct 28215 UUUACUACGUGGUCAAAAUGG----CACCUAAAAUAUAGUGGUGUGUGUGUGUGUGUGUGUGU-UUCCCA 28279 >> URS0000AA8CCB_13735 Pelodiscus sinensis (Chinese softshell turtle) miRNA (ENSPSIG00000019866.1) E-value: 1.1e+4 Identity: 65.31% Query coverage: 16.17% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 |||||||| ||| |||||||| || | | | || || ||| | Sbjct 47 UGUGUGUGUGUGUGUGUGUGAGUGUACAUACACGUGCACACGCAUACAC 95 >> URS00023AD3AC_4641 Musa acuminata (dwarf banana) long non-coding RNA (MACU_LNC007525) E-value: 1.1e+4 Identity: 62.07% Query coverage: 27.72% Gaps: 9.20% Alignment: Query 46 UCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA--UACAUA-CUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACU 129 | ||| ||||||| |||| ||| |||| | |||| | ||| || | || ||||| ||| || | || ||| | | Sbjct 47018 UUACUGGCUUGCAAACUUACACUCCCUUAAGUCUGCUUUUCCUACUUAUCGUUCUAUAAGGCCU-----AGGUUCCUGCCCUCCAUU 47099 >> URS0001976038_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035026843.1) E-value: 1.1e+4 Identity: 51.97% Query coverage: 44.22% Gaps: 15.13% Alignment: Query 50 UGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU 134 || | ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | Sbjct 1020 UGAGAAU--AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUG 1106 Query 135 ------GCUAGAUUGGGCAUCUCUUA-AAACUUUGAGGUGUG-------UGUAUGUAUGUGUG 183 | || || || |||| |||||| | |||||| ||| ||| |||||| Sbjct 1107 ACCUUGGUCAGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGGGUGUGUGUGUGUGUGUG 1166 >> URS0000CD0084_10116 Rattus norvegicus uncharacterized LOC108350474 E-value: 1.1e+4 Identity: 57.02% Query coverage: 36.96% Gaps: 11.40% Alignment: Query 142 UGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUG--UGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAU 229 ||| ||| | | || | || ||||||||| ||| |||| || | || ||| | | | | | || || | Sbjct 105 UGGACAUAUGUGAAUAA-AUGUGGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCGC----GCACC------CAUGUGCAUGCUCU 183 Query 230 UCUAGCCUUCCGUCCUGUGACAUU 253 | ||||| ||||| ||| |||| Sbjct 184 UAUAGCCAAACGUCCAGUGUCAUU 207 >> URS00027BBE60_74358 Podarcis lilfordi non-coding RNA E-value: 1.1e+4 Identity: 56.07% Query coverage: 33.00% Gaps: 7.48% Alignment: Query 167 GUGUGUAUGUAUGUGUGAG---GGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUG----UAAUUCUAGCCUUCCGUCCUGU 247 |||||| ||| |||||| | | || | || | |||| | | ||| |||| | | | || | | | | | ||| Sbjct 5206 GUGUGUGUGUGUGUGUGUGUGCAGCUAGCUUUUGUAUAUUCUGUCACAUGGGCUUCCAGUAGACUUUCAUCCAA-GGUACUGAUCUGA 5292 Query 248 GACAUUCUGUGAUGUAGUC 266 | || || ||| | || Sbjct 5293 GCCACACUCAAAUGAACUC 5311 >> URS000271377D_74358 Podarcis lilfordi non-coding RNA E-value: 1.1e+4 Identity: 69.23% Query coverage: 12.87% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 |||||||| ||| |||||| | || || | |||| Sbjct 13 UGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACAC 51 >> URS0002829484_34632 Rhipicephalus sanguineus (Brown dog tick) uncharacterized LOC119393369 E-value: 1.1e+4 Identity: 61.04% Query coverage: 25.41% Gaps: 7.79% Alignment: Query 144 GGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCU 220 || ||||| ||| | ||| | || | ||| ||| | | |||||||| |||| ||| | ||| || Sbjct 3404 UCGAUAUCUUAGGACU------UAUGUCUUUGGAACUGUCAGGAUAAGCAGAUGCAAUUUCGAUUAAUUCAACAUCC 3474 >> URS00027C9BC6_74358 Podarcis lilfordi non-coding RNA E-value: 1.1e+4 Identity: 69.77% Query coverage: 14.19% Gaps: 0.00% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 | ||||||||| ||| |||||| | || || | |||| | Sbjct 5 GGGGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACAC 47 >> URS0001967EC8_9823 Sus scrofa (pig) lncRNA (ENSSSCG00055026659.1) E-value: 1.1e+4 Identity: 51.97% Query coverage: 44.22% Gaps: 15.13% Alignment: Query 50 UGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU-- 134 || | ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | Sbjct 468 UGAGAAU--AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGAC 556 Query 135 ----GCUAGAUUGGGCAUCUCUUA-AAACUUUGAGGUGUG-------UGUAUGUAUGUGUG 183 | || || || |||| |||||| | |||||| ||| ||| |||||| Sbjct 557 CUUGGUCAGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGGGUGUGUGUGUGUGUGUG 614 >> URS000239E682_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC002871) E-value: 1.1e+4 Identity: 56.74% Query coverage: 44.88% Gaps: 8.51% Alignment: Query 27 AAUCUUGAUGAAAACGAGUUCCAUGGGUUGCA---AAAUUAC--UAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUU 108 |||||||||| || || | ||||| ||||| || ||| ||| || || | | | ||| |||| ||||||| Sbjct 35969 AAUCUUGAUGCAAGAUAGGUGCAUGGUUUGCAUGGAACGUACCAUAUGCUCAAAAAUCAAUUUGGACACACUAGAUGGAAGACCUA- 36054 Query 109 UAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUG 162 |||| | | || | || || | || || | | | | || || Sbjct 36055 ----GAUGACGUGUGUC--AUAUGGAUCUCGCUUUGGUCUGUUUGGAGACAGUG 36102 >> URS0001972C37_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035026843.1) E-value: 1.1e+4 Identity: 51.97% Query coverage: 44.22% Gaps: 15.13% Alignment: Query 50 UGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU-- 134 || | ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | Sbjct 468 UGAGAAU--AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGAC 556 Query 135 ----GCUAGAUUGGGCAUCUCUUA-AAACUUUGAGGUGUG-------UGUAUGUAUGUGUG 183 | || || || |||| |||||| | |||||| ||| ||| |||||| Sbjct 557 CUUGGUCAGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGGGUGUGUGUGUGUGUGUG 614 >> URS00023C6133_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC007273) E-value: 1.1e+4 Identity: 58.12% Query coverage: 36.63% Gaps: 5.98% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAA-UUCUA---GCCUUCCGUCCU--G 246 | | | |||| | || || | ||| | || || |||| || || | ||| | || || | | | ||| | Sbjct 86100 UAUACGAAUGUUGGCGUAUGGUUCAUCUGCUGAUCAGAUGGAUGAAAUUACC-CGGAUGGGAAAAUCCACUAUGUUAGAGGCCUUGG 86185 Query 247 UGACAUUCUGUGAUGUAGUCGUUAUUCAGU 276 | | ||| ||||||||||||| | || || Sbjct 86186 UAAGAUUUUGUGAUGUAGUCGAAACUCUGU 86215 >> URS00019658E4_9823 Sus scrofa (pig) lncRNA (ENSSSCG00055026659.1) E-value: 1.1e+4 Identity: 51.97% Query coverage: 44.22% Gaps: 15.13% Alignment: Query 50 UGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU-- 134 || | ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | Sbjct 549 UGAGAAU--AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUGAC 637 Query 135 ----GCUAGAUUGGGCAUCUCUUA-AAACUUUGAGGUGUG-------UGUAUGUAUGUGUG 183 | || || || |||| |||||| | |||||| ||| ||| |||||| Sbjct 638 CUUGGUCAGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGGGUGUGUGUGUGUGUGUG 695 >> URS00019747C0_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035026843.1) E-value: 1.1e+4 Identity: 51.97% Query coverage: 44.22% Gaps: 15.13% Alignment: Query 50 UGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUA----UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGU 134 || | ||| | ||| || || | | | | || ||| ||| | ||| ||| | || |||| || | Sbjct 968 UGAGAAU--AAACAAGAAUCUCUUGGCUUCUCAAGAGCCUUCCAGACUUUCCUCCUUAUGUUUGGGAGUUUUCCUGACUGCCCUCCUUG 1054 Query 135 ------GCUAGAUUGGGCAUCUCUUA-AAACUUUGAGGUGUG-------UGUAUGUAUGUGUG 183 | || || || |||| |||||| | |||||| ||| ||| |||||| Sbjct 1055 ACCUUGGUCAGCAAGGACA---CUUAUAAACUUGGCGGUGUGGGGGGUGUGUGUGUGUGUGUG 1114 >> URS00020E421B_175245 uncultured fungus partial contains small subunit ribosomal RNA, internal transcribed spacer 1, and 5.8S ribosomal RNA E-value: 1.1e+4 Identity: 70.45% Query coverage: 14.52% Gaps: 0.00% Alignment: Query 146 CAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU 189 ||| | | || |+ | ||||||||||||||||||| | || Sbjct 66 GAUCAUUAACAAAUCGCAUGUGUGUGUAUGUAUGUGUGCGUGUA 109 >> URS00019679F6_7950 Clupea harengus (Atlantic herring) lncRNA (ENSCHAG00000004040.1) E-value: 5.8e+3 Identity: 54.90% Query coverage: 42.90% Gaps: 20.92% Alignment: Query 94 AUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGG-GCAUCU----CUUAAAACUUUGAG---------GUGUGU 170 | ||| ||| || +|| | ||||||| | | | +|||| || | |||| || | | || | |||||| Sbjct 704 AACCAAUCGACUUUACAG----GAGGAGACUCUUCGACUGG-ACAGAUGGGGGGAUCUAGCUCUAACAGGAGUGUGUGUGUGUGUGUGUGU 789 Query 171 GUAUGUAUGUGUGAGGGU-------UAUCAG--AUGCACAUUCGGAUAAAUGAACUUCUGAU 223 || ||| |||||| | || ||| ||| |||| ||| |||| ||+||||| Sbjct 790 GUGUGUGUGUGUG----UGUGUGUGUAGCAGACAUGAGCAUUGAGAUUAAUGUUCUCCUGAU 847 >> URS0000E6EE0E_132585 Anser brachyrhynchus (pink-footed goose) lncRNA (ENSABRG00000017133.1) E-value: 1.1e+4 Identity: 69.05% Query coverage: 27.39% Gaps: 7.14% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCA-GAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 |||||||||| | |||||| | || || | ||||| ||||| || ||||| || ||| | |||| ||| || ||| Sbjct 536 GUGUGUGUAUAUGUGUGUGUGUGU--GCAUGUAGCACA--UGGAUAUUUGGUCUUCUAAU-AUAAAUGUAGCUUUCUGUUCUGC 614 >> URS0000EDA989_5661 Leishmania donovani gene:LdHU3.29.2190(CDS-product:RNA_binding_protei n_putative) E-value: 1.1e+4 Identity: 61.73% Query coverage: 26.73% Gaps: 13.58% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCC 244 |||||||| ||| ||||| | || | |||| || ||| || || |||| |||| |||| ||||| Sbjct 12652 AGUGUGUGUGUGU--GUGUGUGUGUGUGCGUAUGCGCACUCGCGCAA-----CUGCUGA---UAAUCAAAGCCCA-CGUCC 12721 >> URS00025EBA45_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000056484.1) E-value: 1.1e+4 Identity: 66.67% Query coverage: 17.82% Gaps: 3.70% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 |||| |||||||||||| |||||||||| | | | | || || || Sbjct 4044 AAAAGAGUGAGGUGUGUGUGUGUAUGUGUGUGUGA--AUGUACACCCAAUCAGA 4095 >> URS00021EE39F_8049 Gadus morhua (Atlantic cod) lncRNA (ENSGMOG00000029836.1) E-value: 1.1e+4 Identity: 57.75% Query coverage: 23.43% Gaps: 7.04% Alignment: Query 102 GACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGU 172 |+|||| ||||||||| || |||+ | ||| | || |||||||||||| |+ | | Sbjct 461 UCUCCUUUAUAGAUGCCCAUUCUUUACCUC-----AUGAUGACGAUGCUUUUAAAACUUUGAUGCAAGAAU 526 >> URS0000BC70F0_10141 Cavia porcellus (domestic guinea pig) lncRNA (ENSCPOG00000039067.1) E-value: 1.1e+4 Identity: 51.08% Query coverage: 41.25% Gaps: 15.11% Alignment: Query 86 UACAUACUAUCCAU-AAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-------- 164 || | | | | || || |||| | || |||| || | |||| | | | ||| | || | Sbjct 3894 UAAAAAAUCUGAAUGAAAACCUCGGGGUGACGCCCUGAAAACCUCGGGGUG--ACGCAAGCCCUCUGC-----GUGUGUGUGUGUGUG 3974 Query 165 -----GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 |||||||| ||| |||||| | || || | || |||| || || Sbjct 3975 UGUGUGUGUGUGUGUGUGUGUGUGUGUGUAAUGAAAUCUCCAUUGGGCUAU 4025 >> URS000199AF66_9838 Camelus dromedarius (Arabian camel) lncRNA (ENSCDRG00005007682.1) E-value: 1.1e+4 Identity: 64.04% Query coverage: 28.71% Gaps: 4.49% Alignment: Query 90 UACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUG--CGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 |||| | || || | || ||| ||| |||| || |||| || | ||||| || ||| || |||||| |||||||| Sbjct 797 UACUGUUCACAAUAUCU-GUAGUCAUGUACAGAACACGAUGAAGGGUGUUACACUGGGCUUCCAUUACAAG-AUGAGGUCUGUGUAUGC 883 >> URS0000AA0C61_10096 Mus spretus (algerian mouse) predicted gene, 24587 (MGP_SPRETEiJ_G0007392.1) E-value: 1.1e+4 Identity: 67.27% Query coverage: 18.15% Gaps: 0.00% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAAC 216 | ||| |||| ||| ||||| || || |||||||| | | |||| ||| Sbjct 15 CAUGUGCGUGUGUGUGUGUGUAAGUACACACACAUGCACAUACAUACAAAUAAAC 69 >> URS00027FC9EE_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015035137.1) E-value: 1.1e+4 Identity: 58.09% Query coverage: 40.92% Gaps: 11.03% Alignment: Query 137 UAGAUUGGGCAUCUCUUAAAACUUUGAG-----GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGC-----ACAUUCGGAUAAAUGA 214 || | ||| | ||| ||| | || | |||||||| ||| |||||| | || |||| | ||| | || |||| Sbjct 2899 UACUUCAGGCUUACCUUGAAAUUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGAAGAUCCUGGCUACA-CCUGAGUGAUGA 2985 Query 215 ACUUCUGAUUGUAAUUCU-AGCCUUCCGU-CCUGUGACAUUCUGUGAU 260 ||| | |||||| | || | | | || ||||| || || Sbjct 2986 U--CCUGGAAGGAAUUCUCAAGCUGCAGAACUGGUCACAUUGAGUUAU 3031 >> URS00027BD39F_74358 Podarcis lilfordi non-coding RNA E-value: 1.1e+4 Identity: 67.50% Query coverage: 13.20% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUU 203 |||||||| ||| |||||| | || || | |||| Sbjct 14 UGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACA 53 >> URS00025F7988_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000083838.1) E-value: 1.1e+4 Identity: 52.14% Query coverage: 38.61% Gaps: 11.11% Alignment: Query 71 UUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACU 159 ||| | |||| || | | | |||| || | | ||| || | | || || | | ||||| | || Sbjct 2358 UUUUACGAUGCUCUACCCUCAUUGUCCACAACA--UACCAGAAAUACAC---------AAGGGAGCAUGUU--AACAUCUUCCCAGACC 2433 Query 160 UUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 |||||||| ||| |||||| | | Sbjct 2434 ACUCAGUGUGUGUGUGUGUGUGUGUGUG 2461 >> URS00023E3E0F_3649 Carica papaya (papaya) long non-coding RNA (CPAP_LNC008759) E-value: 1.1e+4 Identity: 62.71% Query coverage: 17.16% Gaps: 11.86% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAU-------CAGAUGCACAUUCGGAUAAAU 212 | |||||||| ||| |||||| | | || |||| ||||| ||||| | Sbjct 396 ACAUGUGUGUGUGUGUGUGUGUGUGUAUAUACACAACACAUAUGCUCAUUCAGAUAAUU 454 >> URS0002402D93_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC000677) E-value: 1.1e+4 Identity: 51.01% Query coverage: 63.04% Gaps: 8.59% Alignment: Query 45 UUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUC----UACU 129 |||||||| | | |||| || || | | | || | ||||||| | |||| || | || ||| | || Sbjct 1626 ACCCAUGGGUCGUGACAUUAUUAAACUCUUAGUAUGUUUUAUACAUUC--------AGACUAGUUGGGUAUUCCCCACUUUCAGUUAUC 1706 Query 130 GCGGUGCUAGAUUGGGCAUCUCUUAAAACUU---UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAA 215 || |||||| |||| | | || | ||| | | ||||| ||| | |||| || | | | ||| Sbjct 1707 CAUGUUUUAGAUUCCGCAUAGU--AGAUGUUUUAUUCAGUGAUUCUCAGUAUGCUUGAUAUAUGCCAGACACAGGGUUAGCUUGGGGAA 1793 Query 216 CUUCUGAUUGUAAUUCUAGC 235 || |||| || || | Sbjct 1794 CUCGUGAUCUUAGGUCCUGU 1813 >> URS000286711F_9940 Ovis aries (sheep) lncRNA (ENSOARG00020038938.1) E-value: 1.1e+4 Identity: 62.37% Query coverage: 28.05% Gaps: 9.68% Alignment: Query 109 UAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG--------GUGUGUGUAUGUAUGUGUGAGGGUU 189 ||| ||||| ||| ||||| | |+||| | +| | | | |||| | |||||| ||||||| | +|| |||||| | | Sbjct 1635 AAGAAAUGCCUAGAUACUACU-CAGCGCUUGUCUUAGGGUUUUUUAACAUUUUGAGAUUUUAAAAUGUGUGUUUUCAUAUGUGAGAGAU 1722 Query 190 AUCA 193 ||| Sbjct 1723 GUCA 1726 >> URS00026CBD46_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 1.1e+4 Identity: 69.23% Query coverage: 12.87% Gaps: 0.00% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCAC 200 | ||||||||||||| |||||| | || | ||| Sbjct 14685 GUGGUGUGUGUAUGUGUGUGUGUGUACAUACAUACACAC 14723 >> URS000196F9DE_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035039855.1) E-value: 1.1e+4 Identity: 58.70% Query coverage: 29.37% Gaps: 4.35% Alignment: Query 93 UAUCCAUAAGACCUUUUAGAGAUGC--CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-GUGUGUGUAUGUAU 178 | || | || ||| | | ||| ||| | | | ||| || | || || ||| || | || | |||||||| ||| | Sbjct 4453 CA-CCCUCAGGCCUCUAUGCGAUCAUGACAGCCACCAUACAGGUUCUGGUUUAUGCCUCUGACAAGAACGUGUGUGUGUGUGUGUGUGU 4540 Query 179 GUG 181 ||| Sbjct 4541 GUG 4543 >> URS00026B89A2_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 1.1e+4 Identity: 69.23% Query coverage: 12.87% Gaps: 0.00% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCAC 200 | ||||||||||||| |||||| | || | ||| Sbjct 14685 GUGGUGUGUGUAUGUGUGUGUGUGUACAUACAUACACAC 14723 >> URS0000E8EEDD_8996 Numida meleagris (helmeted guineafowl) lncRNA (ENSNMEG00000013354.1) E-value: 1.1e+4 Identity: 60.66% Query coverage: 20.13% Gaps: 0.00% Alignment: Query 213 GAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUC 273 |||| ||| || || | | ||| | | | |||||||| || |||| | | || Sbjct 1873 UAACUCCUGUUUAUACUCCCAGCGUGACUUUCUGUGACAACCUAAGAUGCUGCUGCAGCUC 1933 >> URS000253B348_9606 Homo sapiens (human) ncRNA E-value: 1.2e+4 Identity: 71.93% Query coverage: 18.48% Gaps: 7.02% Alignment: Query 149 CUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUG-CACAUUC 204 |||| |||| | |||||||| ||| |||||| | || ||||||| |||| | Sbjct 2072 CUCUCAAAAAAGU---GUGUGUGUGUGUGUGUGUGUGUGUCUUCAGAUGUCACACUG 2125 >> URS0002341D50_9606 Homo sapiens (human) HSALNT0324299 E-value: 1.2e+4 Identity: 68.97% Query coverage: 19.14% Gaps: 5.17% Alignment: Query 150 UCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 +||||| || | |||||||| ||| |||||| | || || |||||||| || Sbjct 16203 CCUUAACACAAU---GUGUGUGUGUGUGUGUGUGUGUGUGUGCACAUGCACAUAUAGA 16257 >> URS000233B53B_9606 Homo sapiens (human) HSALNT0320765 E-value: 1.2e+4 Identity: 65.08% Query coverage: 20.79% Gaps: 0.00% Alignment: Query 140 AUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 | +||| |||| ||||| |+| | ||||||| ||| | ||| | | ||||| ||| |+ Sbjct 764 AACGGGAAUCUUUUAAACUUCUUGGUUGUGUGUGUGUGUCGGUGUGUGAAGUCAGAGGCAGAC 826 >> URS00009B1621_10090 Mus musculus long non-coding RNA NONMMUT032694.2 E-value: 1.2e+4 Identity: 54.31% Query coverage: 38.28% Gaps: 10.34% Alignment: Query 93 UAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGU 182 ||||||| || | |||| || | | | | ||||| | || |||| | || |||||||| ||| ||||| Sbjct 81 CGUCCAUAACUCCAGCUCCAGAUUUCCUGGCA----UACAGUGCUGCACAGG--------CAAAAUAUGGAUGUGUGUGUGUGUGUGUGU 158 Query 183 GAGGGUUAUCAGAUGCACAUUCGGAU 208 | | | || ||||| | | Sbjct 159 GUAUACAUUUAUAUAUACAUUUGUGU 184 >> URS00009C0DD7_10090 Mus musculus long non-coding RNA NONMMUT076250.1 E-value: 1.2e+4 Identity: 62.86% Query coverage: 23.10% Gaps: 0.00% Alignment: Query 143 GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 | |||| |||||| || ||| ||||| |||||||||| | + || ||| ||+ | ||| | Sbjct 134 AAGAAUCUUUUAAAAAAUUUUGGUUUGUGUGUGUAUGUGUGUGCUCGCUCGUGUGCUCACAUGUAUAUGU 203 >> URS00009B5940_10090 Mus musculus long non-coding RNA NONMMUT002408.2 E-value: 1.2e+4 Identity: 62.86% Query coverage: 23.10% Gaps: 0.00% Alignment: Query 143 GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 | |||| |||||| || ||| ||||| |||||||||| | + || ||| ||+ | ||| | Sbjct 134 AAGAAUCUUUUAAAAAAUUUUGGUUUGUGUGUGUAUGUGUGUGCUCGCUCGUGUGCUCACAUGUAUAUGU 203 >> URS0002768A9E_74358 Podarcis lilfordi non-coding RNA E-value: 1.2e+4 Identity: 57.48% Query coverage: 41.58% Gaps: 2.36% Alignment: Query 51 GGGUUGCAAAAUUACUAUCCUUU-AAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCU 137 || ||| | | | | ||| | ||| | || || || | ||| | | |||| |||| | | ||| | | |||| | Sbjct 5049 UGGAAGCAGACAUUCAAACCUGUGAAUGUGGCCAUGAAC-UGCUACCUCUCCUACCUG-UAGAAUGACAGUUAAUCUGCAGUGGUGUU 5134 Query 138 AGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 ||| | |||||| | |||||| |||||| | Sbjct 5135 AGACUAACUCCAUCUUAAUAUAAUGAGGUUGGUGUAUAU 5173 >> URS0002710224_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.2e+4 Identity: 60.56% Query coverage: 23.43% Gaps: 9.86% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGC 235 |||||||| |||||||||| | || || | | ||| || | | || ||||| | | | | Sbjct 8314 GUGUGUGUGUGUAUGUGUGUGUGUC-------UGACCUCCUGAUGAACCAGCCUCCGAUUGCUACCCCAUC 8377 >> URS0000D63823_9598 Pan troglodytes (chimpanzee) lncRNA (ENSPTRG00000054617.1) E-value: 1.2e+4 Identity: 62.12% Query coverage: 21.78% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAU 229 |||||||| ||| |||||| | | || || || | | ||| || || ||| | || | Sbjct 579 UGUGUGUGUGUGUGUGUGUGUGCAUGCCCACAUACAUGUAUGCAUACAUAUACAUCUUACUGAAUC 644 >> URS0000AA4FF3_9669 Mustela putorius furo (Domestic ferret) miRNA (ENSMPUG00000023102.1) E-value: 1.2e+4 Identity: 61.70% Query coverage: 15.51% Gaps: 12.77% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 |||||||| ||| |||||| | || || | |||| | | Sbjct 49 GUGUGUGUGUGUGUGUGUGUGUGUAUGCACACACACACAC------A 89 >> URS00019BE946_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.2e+4 Identity: 55.28% Query coverage: 37.95% Gaps: 17.07% Alignment: Query 87 ACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAG----ACUCUACUGCGGUGCUAGAUU----GGGCAUCUCUUAAAACUUUGAGGUGUG 169 ||||||| ||| ||| ||| ||| |||| | | |||| ||+ || | | | || | | ||||| Sbjct 844 ACAUACUGGGCAUUGAACC-------------CAGGAUCACUUUACUACUGAGCUACAUCACCAGGUCUUUUUUUUAUUCAAGUGUGUGUG 921 Query 170 UGUAUGUAUGUGUGAGGGUUAUCAGAUGCACA 201 ||| ||| |||||| | || | | ||||| | Sbjct 922 UGUGUGUGUGUGUGUGUGUGAAAAUAUGCAAA 953 >> URS0000B28B51_10116 Rattus norvegicus long non-coding RNA NONRATT000515.2 E-value: 1.2e+4 Identity: 56.67% Query coverage: 29.70% Gaps: 6.67% Alignment: Query 158 CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 || | || | | || ||||||||| | ||| | || || | | | || | | | ||||| |||||| ||||| Sbjct 393 AUUCGGGGGGGGGGUGUGUAUGUGUCAUGGUGAACAUGUGGAUGUCA------GAGGACAAUUUAAAAUGAUUCUUGCCUUCAACCCUGU 476 >> URS00019E1BD1_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.2e+4 Identity: 62.67% Query coverage: 24.09% Gaps: 2.67% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU--UCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUU 238 ||||||| ||| |||||| | || || ||||||| | | | ||| || | | ||||||| | | Sbjct 1235 UGUGUGUGUGUGUGUGUGUGUGUGUGCACGUGCACAUGUACACACACAUGUGCUGCCUCUCCCAAUUCUAUACAU 1309 >> URS0002398B95_4072 Capsicum annuum (C. annuum) long non-coding RNA (CANN_LNC005524) E-value: 1.2e+4 Identity: 64.71% Query coverage: 16.83% Gaps: 0.00% Alignment: Query 104 CCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUA 154 || | || ||||||||||| ||||| |||||| | ||| | | Sbjct 15072 CCAACUUAAGUUGCCCAGACUCGGGUGCGGAUCUAGAUGUCGGAUCCUUCA 15122 >> URS000236EE4C_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC007296) E-value: 1.2e+4 Identity: 55.17% Query coverage: 31.35% Gaps: 23.28% Alignment: Query 146 CAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUU---------------------AUCAGAUGCACAUUCGGAUAAAUG 213 ||| +||||||||||||||||||| | | || || |||| || |||| ||| | || || Sbjct 1659 CAUACCUUAAAACUUUGAGGUGUGGAUUUUUA-GUAGGAGGAUUUAGAUGGGGCAAAAGUAUCCAAUCAAAUGGUCCAUCCAAU----- 1741 Query 214 AACUUCUGAUUGUAAUUCUAGCCUUCC 240 || ||+||| || | | ||||| || Sbjct 1742 AAAGUCCGAUGGUCAAUAUAGCCAACC 1768 >> URS00023B2B23_3760 Prunus persica (peach) long non-coding RNA (PPER_LNC001661) E-value: 1.2e+4 Identity: 58.62% Query coverage: 19.14% Gaps: 0.00% Alignment: Query 191 UCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUG 248 || | |||| | | | || ||||||||||| | || |||| | | | | Sbjct 10709 GUGGAAGUACAUACAGUUCAAGGAACUUCUGAUGGGUAUGCUAGUUGUUCUCCUCAUU 10766 >> URS000241CF09_4236 Lactuca sativa (L. sativa) long non-coding RNA (LSAT_LNC001620) E-value: 1.2e+4 Identity: 63.10% Query coverage: 27.72% Gaps: 5.95% Alignment: Query 36 GAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCC 119 | || || || |||| | | || | || ||| ||| | |||||||| ||| || || | || |||| | ||||| Sbjct 9281 G-AAUCGUGUCCCAUAUGCUUCAGAUAUAGGAUCGAUUACAUGUGCUAUAUUCAUCCUUUCUAAAA----UUUUCCAAAUGCCU 9359 >> URS000261D6FC_6596 Mercenaria mercenaria (Hard clam (quahog)) uncharacterized LOC123541483, transcript variant X3 E-value: 1.2e+4 Identity: 62.50% Query coverage: 31.02% Gaps: 4.17% Alignment: Query 42 GAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGAC--UCUAC 128 ||| | || ||| ||| || || | |||| || |||| | ||| ||| | || | ||+||||||||| | || | || Sbjct 2665 GAGGACUAUUGGUGGCAGUUAUAGUAAUGUGUAAU--UGUUAUAGAAAUAAUAUUCGUACAUUCAUUCAGAGAUGCCGAAACAAACGAC 2751 Query 129 UGCGGUG 135 ||| || Sbjct 2752 UGCCGUA 2758 >> URS0002735F30_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.2e+4 Identity: 51.88% Query coverage: 51.49% Gaps: 11.88% Alignment: Query 28 AUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAU---AAGACCUUUUAGA 112 ||| || || | | ||||| ||| | || | | | ||| | || | |||| |||| || ||||| Sbjct 2673 AUCCAGAAAUAAUCCAAUUCCACGGGAGGAUGAACCAAACCUCCACCCUGCCGCUCUCAACUUCACCACCAUGAAAAGAGCU-UUAGA 2759 Query 113 GAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUG 183 | |||| | ||| || | | | | ||| || | |||||||| ||| |||||| Sbjct 2760 G----UCAGAGGGUGCUGAGGAAA--G--------ACCCCAGAGACUGUGUGUGUGUGUGUGUGUGUGUGUG 2817 >> URS00027F9B6C_9796 Equus caballus (horse) lncRNA (ENSECAG00000053031.1) E-value: 1.2e+4 Identity: 65.52% Query coverage: 19.14% Gaps: 1.72% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUG 221 | | ||||| ||| ||| |||| || || ||||||| | ||| | |||| | Sbjct 3975 GUUAUGUGUGUGUGUGUUUGAGUGUGUGCACAUGCACACUAGGAGAG-GGAACGGAAG 4031 >> URS00027B879E_74358 Podarcis lilfordi non-coding RNA E-value: 1.2e+4 Identity: 60.38% Query coverage: 17.49% Gaps: 0.00% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGA 214 |||||||| ||| |||||| | || || | |||| | | | || Sbjct 11 UGUGUGUGUGUGUGUGUGUGUGUGUGUAUACACACACACACACACACACAUAU 63 >> URS00027F6C1C_9796 Equus caballus (horse) lncRNA (ENSECAG00000053031.1) E-value: 1.2e+4 Identity: 65.52% Query coverage: 19.14% Gaps: 1.72% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUG 221 | | ||||| ||| ||| |||| || || ||||||| | ||| | |||| | Sbjct 3186 GUUAUGUGUGUGUGUGUUUGAGUGUGUGCACAUGCACACUAGGAGAG-GGAACGGAAG 3242 >> URS00023EA10D_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC011940) E-value: 1.2e+4 Identity: 57.02% Query coverage: 33.99% Gaps: 9.65% Alignment: Query 85 AUACAUACUAUCCA-UAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCA----------UCUCUUAAAACUU 160 | ||||| || | ||| | ||| || | | ||| || || | | ||| | | || | |||| ||| Sbjct 39472 AAACAUAUUAGCAGGUAAAGCUGCUUAAAGUUCCUCAGCCUGUAAAGAAAUCAUAGUUGAGACACGGCAGGAAGUUUCUUCUUUCUU 39558 Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGG 187 ||||| ||||| ||| |||||| | | Sbjct 39559 AGAGGUUUGUGUGUGUGUGUGUGUGUG 39585 >> URS00009010F8_7897 Latimeria chalumnae (coelacanth) Eukaryotic small subunit ribosomal RNA E-value: 1.2e+4 Identity: 60.98% Query coverage: 25.74% Gaps: 10.98% Alignment: Query 134 UGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCA----CAUUCGGAUAAA 211 | | || || || ||||| | |||||||| ||| |||||| || |||| | ||| | || ||| ||| Sbjct 79 UCCCAGCUUCUUUAUGCUCUAAAAGU-----GUGUGUGUGUGUGUGUGUGCUGGGUAUCCAAAGCAUUUACUUUGGGAAAAA 155 >> URS00025E9A86_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000060568.1) E-value: 1.2e+4 Identity: 63.79% Query coverage: 18.48% Gaps: 3.45% Alignment: Query 154 AAAACUUUGAGG--UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA 209 | || ++|| | | ||||| ||| |||||||| | || |||||||| | |+| Sbjct 5709 AGAAUCCUGGUGUAUCUGUGUGUGUCUGUGUGAGUAUGCACACAUGCACAUAUGUACA 5766 >> URS0000EDD692_5661 Leishmania donovani gene:LdHU3.12.0670(CDS-product:hypothetical_prote in_conserved) E-value: 1.2e+4 Identity: 56.12% Query coverage: 31.02% Gaps: 4.08% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAG-AUGCACAUUCGGAUAAAUGAA---CUUCUGAUUGUAAUUCUAGCCUUCCGUCCU 245 | ||| | | |||| |||||| ||| ||| | ||| || |||||| | ||| ||| ||| ||| || || Sbjct 1067 UUGCGUGCGCGCAUGUGUGUGUGUGGGCUAUAUGCAUGUGUAUGUAUGUAAAUGUCUUGCCCUUGACAGUACCGCUACUCUUACGACCA 1155 Query 246 GUGACAUUC 254 | || | Sbjct 1156 UUAUCACUA 1164 >> URS00022B492E_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00000059216.1) E-value: 1.2e+4 Identity: 60.00% Query coverage: 28.05% Gaps: 0.00% Alignment: Query 61 AUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGG 145 | ||||||| ||| | || ||| || | | || | |||| | |||| || || | | || | ||||| | | || Sbjct 3201 AAUACUAUCUUUUGAAAAUGGUAUGAUCAAAGUGAUCAAACCACCUCUCAGAGCAGCACACAUUAUAUAUCUGUGCUGGUUCAGG 3285 >> URS00027E8755_9796 Equus caballus (horse) lncRNA (ENSECAG00000053031.1) E-value: 1.2e+4 Identity: 65.52% Query coverage: 19.14% Gaps: 1.72% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUG 221 | | ||||| ||| ||| |||| || || ||||||| | ||| | |||| | Sbjct 3739 GUUAUGUGUGUGUGUGUUUGAGUGUGUGCACAUGCACACUAGGAGAG-GGAACGGAAG 3795 >> URS00022B69D0_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00845010750.1) E-value: 1.2e+4 Identity: 73.47% Query coverage: 15.51% Gaps: 4.08% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAG-GGUUAUCAGAUGCACAUUC-GGAUAAAU 212 ||||||| ||| |||||| | | +||||||||| || || |||||+ Sbjct 536 UGUGUGUGUGUGUGUGUGUGUGUCUAUCAGAUGGCCAAUCCACAUAAAC 584 >> URS0001A09232_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.2e+4 Identity: 65.96% Query coverage: 15.51% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 |||||||| ||| |||||| | ||| ||| |||| | | | Sbjct 13 UGUGUGUGUGUGUGUGUGUGUGUGUUUAGAGACACACACACACACAC 59 >> URS0000EDC609_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 1.2e+4 Identity: 68.63% Query coverage: 16.83% Gaps: 0.00% Alignment: Query 144 GGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAG 194 | ||| || || || | | | |||||||| ||| |||||| | || || Sbjct 308 GCCAUUUCAUAGAAAUCUAAAGUGUGUGUGUGUGUGUGUGUGUGUGGCAAG 358 >> URS00023D902A_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC011940) E-value: 1.2e+4 Identity: 57.02% Query coverage: 33.99% Gaps: 9.65% Alignment: Query 85 AUACAUACUAUCCA-UAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCA----------UCUCUUAAAACUU 160 | ||||| || | ||| | ||| || | | ||| || || | | ||| | | || | |||| ||| Sbjct 18099 AAACAUAUUAGCAGGUAAAGCUGCUUAAAGUUCCUCAGCCUGUAAAGAAAUCAUAGUUGAGACACGGCAGGAAGUUUCUUCUUUCUU 18185 Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGG 187 ||||| ||||| ||| |||||| | | Sbjct 18186 AGAGGUUUGUGUGUGUGUGUGUGUGUG 18212 >> URS0002401F0A_4113 Solanum tuberosum (potato) long non-coding RNA (STUB_LNC011940) E-value: 1.2e+4 Identity: 57.02% Query coverage: 33.99% Gaps: 9.65% Alignment: Query 85 AUACAUACUAUCCA-UAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCA----------UCUCUUAAAACUU 160 | ||||| || | ||| | ||| || | | ||| || || | | ||| | | || | |||| ||| Sbjct 63844 AAACAUAUUAGCAGGUAAAGCUGCUUAAAGUUCCUCAGCCUGUAAAGAAAUCAUAGUUGAGACACGGCAGGAAGUUUCUUCUUUCUU 63930 Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGG 187 ||||| ||||| ||| |||||| | | Sbjct 63931 AGAGGUUUGUGUGUGUGUGUGUGUGUG 63957 >> URS00026DF269_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 1.2e+4 Identity: 72.22% Query coverage: 17.82% Gaps: 7.41% Alignment: Query 163 AGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAAC 216 |||||||||||||| |||||| | || || ||||||| | ||||| | Sbjct 2242 AGGUGUGUGUAUGUGUGUGUGUGUGUAUACAUAUGCACAAUG----AAAUGCCC 2291 >> URS000278CBD5_74358 Podarcis lilfordi non-coding RNA E-value: 1.2e+4 Identity: 57.14% Query coverage: 30.03% Gaps: 6.59% Alignment: Query 93 UAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || | ||| |||||| ||| | | || || | || || | || ||||| ||| | |||||||| ||| Sbjct 13304 UAACUAUACAACCUUUAGAAGACAUC------UGAAGGCAGUCUUGCAUAGGCAAGCUGUUAAAUGUUUAAUGUGUGUGUGUGUGG 13383 Query 179 GUGUG 183 | | | Sbjct 13384 GAGGG 13388 >> URS00019A4665_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.2e+4 Identity: 59.15% Query coverage: 22.77% Gaps: 2.82% Alignment: Query 149 CUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA--GGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU 217 || | | ||||| |||||||| ||| |||||| | || | | |||| || ||| || Sbjct 21 CUUUAUUACCUUUGUAGUGUGUGUGUGUGUGUGUGUGUGUGUGCGCGCACACACACACGCGCGCAUGCACA 91 >> URS00027ECB87_9796 Equus caballus (horse) lncRNA (ENSECAG00000053031.1) E-value: 1.2e+4 Identity: 65.52% Query coverage: 19.14% Gaps: 1.72% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUG 221 | | ||||| ||| ||| |||| || || ||||||| | ||| | |||| | Sbjct 3896 GUUAUGUGUGUGUGUGUUUGAGUGUGUGCACAUGCACACUAGGAGAG-GGAACGGAAG 3952 >> URS000274A85E_74358 Podarcis lilfordi non-coding RNA E-value: 1.2e+4 Identity: 66.67% Query coverage: 14.19% Gaps: 4.44% Alignment: Query 160 UUGAGGUGUGUGUAUGUAUGUGUGAGGGU--UAUCAGAUGCACAU 202 ||| |||||||| ||| |||||| | || || | |||| Sbjct 4 UUGCAGUGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACAC 48 >> URS0000AA91BC_13735 Pelodiscus sinensis (Chinese softshell turtle) miRNA (ENSPSIG00000019542.1) E-value: 1.2e+4 Identity: 69.23% Query coverage: 12.87% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 |||||||| ||| |||||| | || || | |||| Sbjct 41 UGUGUGUGUGUGUGUGUGUGUGUGUAUACACACACACAC 79 >> URS00025F4366_8022 Oncorhynchus mykiss (rainbow trout) lncRNA (ENSOMYG00000053836.1) E-value: 1.2e+4 Identity: 65.38% Query coverage: 17.16% Gaps: 9.62% Alignment: Query 154 AAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG 205 ||||| || |||||||| ||| || | |||||| | ||||| | Sbjct 738 AAAACCUUAGUGUGUGUGUGUGUGUGC-----GUCUAUCAGUUACACAUACA 784 >> URS0001A1CDBD_441215 Ursus thibetanus thibetanus (Asiatic black bear) lncRNA (ENSUTTG00000007159.1) E-value: 1.2e+4 Identity: 53.47% Query coverage: 32.67% Gaps: 13.86% Alignment: Query 81 CUAUAUACAUACUAUCCAUAAGACCUUU--UAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUG 167 |||| | | | |||| |||| ||| | | |||| | || ||| || | || || | | | | ||| Sbjct 69 UUAUAAAAAAAAAAUCCCUAAGGCCUCUUUUUCUCUUGCCUUGCAGCUUCUGAGGAGAAAGUGUGUGUGUGUGU------------GUG 145 Query 168 UGUGUAUGUAUG 179 ||||| ||| || Sbjct 146 UGUGUGUGUGUG 157 >> URS0000EAC276_9606 Homo sapiens (human) HSALNT0112369 E-value: 1.3e+4 Identity: 68.18% Query coverage: 21.78% Gaps: 1.52% Alignment: Query 148 UCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 |||||||||| |||| |||| || || | ||||||||||| |||||| || | || Sbjct 604 UCUCUUAAAAGUUUGUGGUGGCUGCUCUGAUAGUAGUGGGUUAUCAGAA-CACAUUAACAUUAGUG 668 >> URS00009BE205_10090 Mus musculus long non-coding RNA NONMMUT077765.1 E-value: 1.3e+4 Identity: 61.63% Query coverage: 25.74% Gaps: 9.30% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU-UCGGAUAAAUGAACUUCUGAUUGUAAUU-------CUAGCCUUCCGU 242 |||||||| ||| ||||| | |+|| ||| | || ||||| |+ | |+|| || |||||| |+| ||||| || Sbjct 793 GUGUGUGUGUGUGUGUGUAAAUGCUAAAAGAAGGCUAUAAAGGAUAGACCCAUUCCUCAUAGUAAUUUGUGGAUCCAACCUUCUGU 878 >> URS00009B6939_10090 Mus musculus long non-coding RNA NONMMUT094962.1 E-value: 1.3e+4 Identity: 68.85% Query coverage: 19.47% Gaps: 3.28% Alignment: Query 136 CUAGAUUGGGCAUCUCUUAAA--ACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAG 194 || || || | ||||| | ||| |||||||| ||| ||||| || |||||||| Sbjct 763 CUGGAGAGGCAAAAUCUUACAUACUCUUGGUGUGUGUGUGUGUGUGUGUUAGUGUUAUCAG 823 >> URS00009BF0ED_10090 Mus musculus long non-coding RNA NONMMUT050196.2 E-value: 1.3e+4 Identity: 57.29% Query coverage: 29.37% Gaps: 14.58% Alignment: Query 149 CUCUUAAAACUUUGAG-----GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGC--ACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUC 231 | ||||||| | | |||||||| ||| |||||| | || | | ||| ||| || | | |||| || || || Sbjct 280 UUUUUAAAACCGAGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUUAGGCUGCCAACACAUGGUUCUAGGAAC-------UGAAACUC 362 Query 232 UAGCCU 237 | | | Sbjct 363 UGGUCC 368 >> URS000075A453_10090 Mus musculus (mouse) RIKEN cDNA 9330175M20 gene E-value: 1.3e+4 Identity: 61.63% Query coverage: 25.74% Gaps: 9.30% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU-UCGGAUAAAUGAACUUCUGAUUGUAAUU-------CUAGCCUUCCGU 242 |||||||| ||| ||||| | |+|| ||| | || ||||| |+ | |+|| || |||||| |+| ||||| || Sbjct 670 GUGUGUGUGUGUGUGUGUAAAUGCUAAAAGAAGGCUAUAAAGGAUAGACCCAUUCCUCAUAGUAAUUUGUGGAUCCAACCUUCUGU 755 >> URS0000A908E0_10090 Mus musculus (mouse) predicted gene, 55541 (ENSMUSG00002075030.1) E-value: 1.3e+4 Identity: 65.91% Query coverage: 14.52% Gaps: 0.00% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA 209 ||||||| ||| |||||| | || || | |||| | | | Sbjct 18 UGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACACA 61 >> URS00009B3A00_10090 Mus musculus long non-coding RNA NONMMUT070753.2 E-value: 1.3e+4 Identity: 63.38% Query coverage: 23.10% Gaps: 5.63% Alignment: Query 163 AGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA-AUGAACUUCUGAUUGUAAUUCU 232 | |||||||| ||| |||| | |||| ||| |||| || | || | | || ||| || | | | Sbjct 1785 AUGUGUGUGUGUGUGUGUGGGGGGGUAAUC-CUUGCAAAUCCAGAAGAAAAAAAAUUCCUAUCUU--UCCC 1852 >> URS000075D66C_10090 Mus musculus RIKEN cDNA 5031426D15 gene (5031426D15Rik) E-value: 1.3e+4 Identity: 57.14% Query coverage: 27.39% Gaps: 8.79% Alignment: Query 167 GUGUGUAUGUAUGUGU----GAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAU----UCUAGCCUUCCGUCCUGUG 248 || ||||||||||||| | | || ||||| || | | || | | | | || ||| ||| | |||| | ||| Sbjct 30 GUAUGUAUGUAUGUGUGUGUGUGUACCAUAGCAUGCAUAUGAAGGUCAAAGGGCAAUUUACUGGAAUCAGCUCUCUCUUUCCACCAUGUA 119 Query 249 A 249 | Sbjct 120 A 120 >> URS00027DBC3D_74358 Podarcis lilfordi non-coding RNA E-value: 1.3e+4 Identity: 63.27% Query coverage: 15.51% Gaps: 4.08% Alignment: Query 163 AGGUGUGUGUAUGUAUGUG--UGAGGGUUAUCAGAUGCACAUUCGGAUA 209 ||||||||| ||| |||| || | || || | |||| | | | Sbjct 6 UGGUGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACACA 54 >> URS00023E609F_42345 Phoenix dactylifera (date palm) long non-coding RNA (PDAC_LNC004671) E-value: 1.3e+4 Identity: 57.43% Query coverage: 32.34% Gaps: 7.92% Alignment: Query 192 CAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUCG---UUAUUCA 274 ||| | | |||| |||| | ||++ |||| ||||||| ||| ||| | +|||| |||||| | +||| Sbjct 82588 GAGAAGUAUAUUCUGAUAUUAAA-----AGACCAUAAUAAUAGCCUUUUGUCAUGUAAUGCUCUGAGAUGUACAUGAGUGCAUUUU 82668 Query 275 GUGAUAUAAUGAAUC 289 ||||| +| +| ||| Sbjct 82669 GUGAUGCAUCGCAUC 82683 >> URS000234B1EA_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC009454) E-value: 1.3e+4 Identity: 62.71% Query coverage: 19.47% Gaps: 10.17% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 || || ||| ||||||||| ||| |||||| | || ||| || |||| Sbjct 84399 UACAAUGUUGUGGUGUGUGUGUGUGUGUGUGUGUA------UAUACACCCUCACAUAAC 84451 >> URS0002419A76_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC009454) E-value: 1.3e+4 Identity: 62.71% Query coverage: 19.47% Gaps: 10.17% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 || || ||| ||||||||| ||| |||||| | || ||| || |||| Sbjct 23977 UACAAUGUUGUGGUGUGUGUGUGUGUGUGUGUGUA------UAUACACCCUCACAUAAC 24029 >> URS0000D6F7E1_7764 Eptatretus burgeri (Inshore hagfish) lncRNA (ENSEBUG00000017535.1) E-value: 1.3e+4 Identity: 55.25% Query coverage: 53.14% Gaps: 18.78% Alignment: Query 26 CAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCC------UUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUU 108 ||+||||||||||| || ||| |||| +||| | | |||| || || | | +| || || |||| | ||+ Sbjct 2475 UAACCUUGAUGAAAAUGACA-------GUUA-AAAAACACUUUACAUUUUAUUUAUUUGUGUUCUCCAUAUUCUCAUAAUAAAAGUUUC 2555 Query 109 UAGA------GAUGCCCAGA-CUCUACUGCG------GUGCUAGAUUGGGCAUCUCUUAAAACUUUGA-GGUGUGUGUAUGUAUGUGUG 183 | || |||||| | | ||| | || || | | +||| || | || |||| | ||||||| ||| |||||| Sbjct 2556 UUGAAGAUUUGAUGCCAAAAUCUCAAUUGGUAAAAAUGUUAUGGCCUGGACA------GACACAUUGAAGCUGUGUGUGUGUGUGUGUG 2638 Query 184 AGG 186 | Sbjct 2639 UGU 2641 >> URS00023F4030_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC009456) E-value: 1.3e+4 Identity: 62.71% Query coverage: 19.47% Gaps: 10.17% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 || || ||| ||||||||| ||| |||||| | || ||| || |||| Sbjct 47795 UACAAUGUUGUGGUGUGUGUGUGUGUGUGUGUGUA------UAUACACCCUCACAUAAC 47847 >> URS0000A9DBA1_30611 Otolemur garnettii (small-eared galago) miRNA (ENSOGAG00000033010.1) E-value: 1.3e+4 Identity: 59.42% Query coverage: 22.77% Gaps: 10.14% Alignment: Query 143 GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 || |||| || | |||||||| ||| |||||| | || ||| |||| | ||| | Sbjct 40 GGUUGUCUCAUAUA-------UGUGUGUGUGUGUGUGUGUGUGUGUGUAUAGAAACACACACAAAUACA 101 >> URS00023F01E8_3750 Malus domestica (apple) long non-coding RNA (MDOM_LNC009456) E-value: 1.3e+4 Identity: 62.71% Query coverage: 19.47% Gaps: 10.17% Alignment: Query 153 UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 || || ||| ||||||||| ||| |||||| | || ||| || |||| Sbjct 22990 UACAAUGUUGUGGUGUGUGUGUGUGUGUGUGUGUA------UAUACACCCUCACAUAAC 23042 >> URS00023D5487_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC022506) E-value: 1.3e+4 Identity: 61.98% Query coverage: 38.28% Gaps: 7.44% Alignment: Query 62 UUACUAUCCUUUAAUUUUGCUAUAUACAUA-CUAUCCAUAAGACCUUUUAGAGAUGCC----CAGACUCUACUGCGGUGCUAGAUUG 143 ||| || ||| | || | || | ||| ||| ||||| | |||||||||| || |||||| || | ||| || | || Sbjct 29225 UUAUCAUGCUUCACUUCUACUCCCUCCAUUCCUACAUAUAAGCCUUUUUAGAGAUUCCAAUACAGACUAUA-UACGGAGCAAAAUGA 29310 Query 144 GGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUA 177 | ||| | ||| | | || || ||| || Sbjct 29311 GU-GAAUCU--ACACUCUAAAAUGCGUCUAUAUA 29341 >> URS00027BE3F3_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.3e+4 Identity: 59.72% Query coverage: 23.76% Gaps: 9.72% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 |||||||| |||||||||| | || || | | ||| || | | || ||||| | | | | Sbjct 8 GUGUGUGUGUGUAUGUGUGUGUGUC-------UGACCUCCUGAUGAACCAGCCUCCGAUUGCUACCCCAUCA 72 >> URS0000D72216_7764 Eptatretus burgeri (Inshore hagfish) lncRNA (ENSEBUG00000017535.1) E-value: 1.3e+4 Identity: 55.25% Query coverage: 53.14% Gaps: 18.78% Alignment: Query 26 CAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCC------UUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUU 108 ||+||||||||||| || ||| |||| +||| | | |||| || || | | +| || || |||| | ||+ Sbjct 2457 UAACCUUGAUGAAAAUGACA-------GUUA-AAAAACACUUUACAUUUUAUUUAUUUGUGUUCUCCAUAUUCUCAUAAUAAAAGUUUC 2537 Query 109 UAGA------GAUGCCCAGA-CUCUACUGCG------GUGCUAGAUUGGGCAUCUCUUAAAACUUUGA-GGUGUGUGUAUGUAUGUGUG 183 | || |||||| | | ||| | || || | | +||| || | || |||| | ||||||| ||| |||||| Sbjct 2538 UUGAAGAUUUGAUGCCAAAAUCUCAAUUGGUAAAAAUGUUAUGGCCUGGACA------GACACAUUGAAGCUGUGUGUGUGUGUGUGUG 2620 Query 184 AGG 186 | Sbjct 2621 UGU 2623 >> URS0001A103A2_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.3e+4 Identity: 59.17% Query coverage: 35.64% Gaps: 10.83% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU---GAACUUC----UGAUUGUAAUU---CUAGCCUUCCGU--C 243 |||||||| || |||| ||| | ||||| |||||| || | || ||| | | ||| | ||| || || | | | Sbjct 184 GUGUGUGUGUGCUUGUGAGAGAGA-GACAGAUAGACAUUCAGAGACAUUGAGAAGUACAAAGUGACUCUAAACAAAUGAGUCUAACAUCAC 273 Query 244 CUGUGACAUUCUGUGAUGUAGUCGUUAUU 272 | | || |||| |||| | || ||| Sbjct 274 CCGCCUAAUGCUGUUAUGUUAUUGUCAUU 302 >> URS0002741E19_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 1.3e+4 Identity: 58.06% Query coverage: 40.59% Gaps: 12.10% Alignment: Query 167 GUGUGUAUGUAUGUGUGAGGGUUAUC-AGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUG 256 |||||||||| |||| |||| || | ||| ||||||| | || || ||| ||||| || |||| |||| Sbjct 226 GUGUGUAUGUGCGUGU-----UUAUGUGUGUGAGCCUUCAUUCAAAUGAAUUAU------UAUUUAAAGCGUUCCGACC-AUGACCUUCUU 304 Query 257 UGAUGUAGUCGUUAUUCAGUGAUAUAAUGAAUC 289 |||| | ||| ||| ||| || || Sbjct 305 GUAUGUUU--CCCACUCAACGAUGUAAAGAUUC 335 >> URS0002407CDD_3055 Chlamydomonas reinhardtii (C. reinhardtii) long non-coding RNA (CREI_LNC000068) E-value: 1.3e+4 Identity: 66.04% Query coverage: 17.16% Gaps: 1.89% Alignment: Query 130 GCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUG 181 | | || | | ||| ||||| || | || | |||||||| ||| |||| Sbjct 9938 UCAGCGCCACAAAACGCACCUCUUCCAAUUGUGUGUGUGUGUGUGUGUGUGUG 9990 >> URS0002712364_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.3e+4 Identity: 52.60% Query coverage: 45.21% Gaps: 23.38% Alignment: Query 58 AAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCU----UUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAU 141 |||| |||| | | | || ||||| || | ||| | | || | ||| | | |||| | || | | || Sbjct 7112 AAAACUACUGUGUUGUGAUAUUGCUUAAUUC-UACGACCAAUCAAUCCUGCACAUGACAGAUAGUCCAACAUU-----------ACAU 7187 Query 142 UGGGCAUCUCUUAAAACUUUGAG-------------GUGUGUGUAUGUAUGUGUGAGGGUUAUCAG 194 || | |||||||| | |||||||| ||| |||||| ||| || || Sbjct 7188 UGUG-------AGAAACUUUGUGUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGGGAAAUGAG 7246 >> URS00023D7EC2_2711 Citrus sinensis (sweet orange) long non-coding RNA (CSIN_LNC003018) E-value: 1.3e+4 Identity: 55.05% Query coverage: 33.66% Gaps: 6.42% Alignment: Query 48 CAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGA-GAUGCCCA------GACUCUA 127 ||||| |||| ||| | || || |||| || |||||| | ||| ||| || || | | | || | Sbjct 54799 GAUGGGAUGCAUUAUUUUCUCCUCUUCAUGCUGCUGGUUAUAUACUAAACCCUAGAUAUUUCGGAAGAGGUCAAAACAAGGAUAAAA 54885 Query 128 CUGCGGUGCUAGAUUGGGCAUC 149 ||| ||| | |||| ||| Sbjct 54886 CUGUAAUGCGGGGUUGGAAAUC 54907 >> URS00027539E4_74358 Podarcis lilfordi non-coding RNA E-value: 1.3e+4 Identity: 50.78% Query coverage: 40.59% Gaps: 29.69% Alignment: Query 63 UACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUG----CCCAGACUCUACUGCGGUGCUAGAUUGG 144 | | |||||| | | ||||| || || ||||| | ||| || |||||| Sbjct 13171 UGCCAUCCUUAACUGCUGCUAAAUGCACUAGGUCCAUGA--------AGAAAUCUCAUCCCAGA---------------------- 13226 Query 145 GCAUCUCUUAAAACU-UUGAGGUGUGUGUAUGUAUGUGUGAG 185 ||||||| | ||| |||||||| ||| |||||| | Sbjct 13227 ---GAUCUUAAACCAGUUGCAGUGUGUGUGUGUGUGUGUGUG 13265 >> URS000197C2FF_9823 Sus scrofa (pig) lncRNA (ENSSSCG00060019400.1) E-value: 1.3e+4 Identity: 59.57% Query coverage: 25.74% Gaps: 18.09% Alignment: Query 118 CCAGACUCUACUGCGGUGC----------UAGAUUGGGC--AUCUC----UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUA 190 ||| || | | | || | ||||| || ||||| || ||||||| |||||||| ||| |||||| | |||| Sbjct 2229 CCAUACACCAAAGAGGAGACAAACAGAUUUAGAUGGGCAGUAUCUCAGAUUUGCAACUUUGU-GUGUGUGUGUGUGUGUGUGUGUGUUA 2316 Query 191 UCAGA 195 | | Sbjct 2317 UUUUA 2321 >> URS00021F2AD9_9541 Macaca fascicularis (Crab-eating macaque) lncRNA (ENSMFAG00000064161.1) E-value: 1.3e+4 Identity: 60.00% Query coverage: 19.80% Gaps: 5.00% Alignment: Query 117 CCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 | | |||| | | ||| || ||| | ||| |||||||||||||| || Sbjct 1363 GC---CCCCUACCACAAUCCUAAAUAUGGCUAUGCACUAAAUUUUGAGGUGUGUGUGUGG 1419 >> URS00027C9DDA_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.3e+4 Identity: 62.50% Query coverage: 20.79% Gaps: 3.13% Alignment: Query 125 CUACUGCGGUGCUAGAUUGGGCAUCUCU-UAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 || |||| | | | ||| | || | | || | ||| |||||| ||| |||||| | | Sbjct 4266 CUGCUGCAGCUGCACACC-AGCACCACUCUGCAGCUCUCAGGCGUGUGUGUGUGUGUGUGUGUG 4328 >> URS0002423866_4558 Sorghum bicolor (sorghum) long non-coding RNA (SBIC_LNC006209) E-value: 1.3e+4 Identity: 56.76% Query coverage: 36.63% Gaps: 13.51% Alignment: Query 122 ACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU 208 | | | | ||| |||||| | || || |||||||||||||||||| |||| || | ||| || Sbjct 10504 AUGCGAAGGAGGUCAUAGAUUCG-----UCCAAACUCUUUGAGGUGUGUGUAUG----------GGUUUUCCUCACCUUUUUCUGAG 10575 Query 209 AAAUGAACUUCUGAUUGUAAUUCU 232 ||| | || | | | |||||| Sbjct 10576 AAAGGUUGUUUUUAAAGAAAUUCU 10599 >> URS0002182A91_105023 Nothobranchius furzeri (turquoise killifish) lncRNA (ENSNFUG00015000675.1) E-value: 1.3e+4 Identity: 62.90% Query coverage: 20.46% Gaps: 11.29% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGA 222 || |||||||| ||| |||||| | | | |||| || || | | ||| ||| | Sbjct 833 UG-UGUGUGUGUGUGUGUGUGUGUGUG------UAGUCACAAUCUGAGAGAAAAACAUCUAA 887 >> URS0000AA3CC6_9669 Mustela putorius furo (Domestic ferret) miRNA (ENSMPUG00000021604.1) E-value: 1.3e+4 Identity: 68.89% Query coverage: 14.85% Gaps: 0.00% Alignment: Query 158 CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 || || |||||||| |||| ||| | || ||||| |||| Sbjct 15 CUGUGUGGUGUGUGCAUGUGUGUUUCAGAAAUAUCACUCACACAC 59 >> URS0002426CE3_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC000141) E-value: 1.3e+4 Identity: 63.51% Query coverage: 24.42% Gaps: 1.35% Alignment: Query 64 ACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCU 137 |||| || | ||| |||||| ||| || | ||| |||||||||| || ||||| | || | | Sbjct 7732 GCUAUGCUAUUAUUGUGCUAUUUACCCCCUUCAUACAAGU-CUUUUAGAGAGAGACAAACUCUCGUUCGAAGAU 7804 >> URS000237956F_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC004546) E-value: 1.3e+4 Identity: 53.28% Query coverage: 38.61% Gaps: 7.38% Alignment: Query 167 GUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC-----GGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUG 248 |||||| ||| |||||| | || ||| | ||| | || ||||||| || || ||| || | | | || Sbjct 26354 GUGUGUGUGUGUGUGUGUGUGUGUGAAGAAGUACACCCCUGCAGGGUAAAUGAUCUACUC----GAAUAGCCGCGUCCACGGAUAUG 26436 Query 249 ACAUUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAA 283 | || || | | || |||| || | Sbjct 26437 GACUACUUGGAAGCUCACAUUGUUCAUAGACAAGC 26471 >> URS0002426CE3_3634 Gossypium barbadense (sea-island cotton) long non-coding RNA (GBAR_LNC000141) E-value: 1.3e+4 Identity: 63.51% Query coverage: 24.42% Gaps: 1.35% Alignment: Query 64 ACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCU 137 |||| || | ||| |||||| ||| || | ||| |||||||||| || ||||| | || | | Sbjct 7732 GCUAUGCUAUUAUUGUGCUAUUUACCCCCUUCAUACAAGU-CUUUUAGAGAGAGACAAACUCUCGUUCGAAGAU 7804 >> URS00023C4E57_3055 Chlamydomonas reinhardtii (C. reinhardtii) long non-coding RNA (CREI_LNC000068) E-value: 1.3e+4 Identity: 66.04% Query coverage: 17.16% Gaps: 1.89% Alignment: Query 130 GCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUG 181 | | || | | ||| ||||| || | || | |||||||| ||| |||| Sbjct 8343 UCAGCGCCACAAAACGCACCUCUUCCAAUUGUGUGUGUGUGUGUGUGUGUGUG 8395 >> URS00019E966E_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.3e+4 Identity: 52.76% Query coverage: 49.83% Gaps: 15.95% Alignment: Query 81 CUAUAUACAUACUAUCCAUAAGACCUUUUAG--AGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGC----------AUCUCUUAAAA 157 | || ||| ||| || | || | | | | ||||| | || ||||||| | | ||| | Sbjct 1330 CCUGAUGCAUGCUAGGCAAGGGCUCUGCUUGCUACAGCCCCAGCCCCUCA------UCUAGAUUUUACUGAUUACAGUCUAGAUUACAG 1412 Query 158 CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUC 231 | | |||||||| ||| ||||| | | ||| || | |||| |||| | ||| || ||||||| Sbjct 1413 UCUGUAUGUGUGUGUGUGU--GUGUGUGUGCUAUGUGAG--AGAUUC----AAAUAACUUUCAGAAUGUAAUUU 1478 >> URS00027A3CC9_74358 Podarcis lilfordi non-coding RNA E-value: 1.3e+4 Identity: 63.64% Query coverage: 16.83% Gaps: 7.27% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAU----CAGAUGCACAUUCGGAUAAAUGAA 215 |||||||| ||| |||||| | || || | |||| || || ||| | Sbjct 81 GUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACACGCAUGCAUGCA 135 >> URS0001967452_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000038349.1) E-value: 1.3e+4 Identity: 51.49% Query coverage: 44.22% Gaps: 16.42% Alignment: Query 76 UUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGG 165 ||||||| || | | | | || | | || || ||| || | | | ||| | | | | | | | | Sbjct 794 UUUUGCUGUAGAAACCCCACCCCUUAUCCC--------------AGUAA--CCUGUGG--CAGGUAUAUUCAUUUAUAACAUCAAUUAUG 865 Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA 209 ||| || ||| |||||| |||| | || | || | | | | | Sbjct 866 UGU--GUGUGUGUGUGUGUGGGUAAACAAA--CAUAAUUGUAGA 905 >> URS00026B3040_74358 Podarcis lilfordi non-coding RNA E-value: 1.3e+4 Identity: 65.31% Query coverage: 16.17% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 |||||||| ||| |||||| | || |||| |||| | | | | Sbjct 14 GUGUGUGUGUGUGUGUGUGUGUGUGUACAGACACACACACACACACACU 62 >> URS00025ABC02_175245 uncultured fungus sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene E-value: 1.3e+4 Identity: 53.39% Query coverage: 34.98% Gaps: 14.41% Alignment: Query 147 AUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC----GGAUAAAUGAACUUCUGAUUGUAAU 229 | | | ||||| ||||||| | |||| ||||| | || | || ||| | ||| || || | ||| | || Sbjct 1261 ACCGCC----UCUUUGUGGUGUGU-UGUGUAAGUGUGUGUGUAUAUAUAUAUACACACACAUACAUACAUAUACACCACAUUAUUAU 1342 Query 230 U--------CUAGCCUUCCGUCCUGUGACAU 252 | | |||| ||| | |||| Sbjct 1343 UAUUAUAUCCCGGCCUCAAGUCGAGCGACAG 1373 >> URS0000BCE5CC_10089 Mus caroli (Ryukyu mouse) predicted gene, 23630 (MGP_CAROLIEiJ_G0007736.1) E-value: 1.3e+4 Identity: 67.39% Query coverage: 15.18% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 |||||||| ||| |||||| | || || |+ ||||| | |+| Sbjct 32 GUGUGUGUGUGUGUGUGUGUGUGUACACACACACACAUACACACAC 77 >> URS00023895FE_3055 Chlamydomonas reinhardtii (C. reinhardtii) long non-coding RNA (CREI_LNC000068) E-value: 1.3e+4 Identity: 66.04% Query coverage: 17.16% Gaps: 1.89% Alignment: Query 130 GCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUG 181 | | || | | ||| ||||| || | || | |||||||| ||| |||| Sbjct 9099 UCAGCGCCACAAAACGCACCUCUUCCAAUUGUGUGUGUGUGUGUGUGUGUGUG 9151 >> URS0000D4BAA4_9601 Pongo abelii (Sumatran orangutan) retained intron E-value: 1.3e+4 Identity: 61.97% Query coverage: 22.11% Gaps: 5.63% Alignment: Query 135 GCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU----UAUCAGAUGCACA 201 |||||| || ||+| ||| +||||| ||| | ||||| |||||| | || ||||||| Sbjct 4831 GCUAGAAUGCACACCAAAAAAAUACUUGAGCUGUAUAUAUGUGUGUGUGUGUGUGUGUGCAUGUAUGCACA 4901 >> URS0000B259FA_10116 Rattus norvegicus long non-coding RNA NONRATT006973.2 E-value: 1.3e+4 Identity: 59.21% Query coverage: 25.08% Gaps: 5.26% Alignment: Query 112 AGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 ||||||| | || | | | || |||| | || || || |||||||| ||| |||||| | | Sbjct 500 AGAUGCCAAACAUCCUUUCUGUUUCUU----UCUGUUCUCCUCAAGCUCUGGUGUGUGUGUGUGUGUGUGUGUGUG 571 >> URS000196CC58_9823 Sus scrofa (pig) lncRNA (ENSSSCG00040002311.1) E-value: 1.3e+4 Identity: 59.57% Query coverage: 25.74% Gaps: 18.09% Alignment: Query 118 CCAGACUCUACUGCGGUGC----------UAGAUUGGGC--AUCUC----UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUA 190 ||| || | | | || | ||||| || ||||| || ||||||| |||||||| ||| |||||| | |||| Sbjct 2229 CCAUACACCAAAGAGGAGACAAACAGAUUUAGAUGGGCAGUAUCUCAGAUUUGCAACUUUGU-GUGUGUGUGUGUGUGUGUGUGUGUUA 2316 Query 191 UCAGA 195 | | Sbjct 2317 UUUUA 2321 >> URS0002382CDE_3625 Actinidia chinensis (A. chinensis) long non-coding RNA (ACHI_LNC009576) E-value: 1.3e+4 Identity: 60.24% Query coverage: 23.10% Gaps: 16.87% Alignment: Query 116 GCCCAGACUCUACUGCGG------UGCUAGAUUGGGCAUCUC------UUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGAG 185 | |||||||| | || | || | || | || || ||||| || | |||||||| ||| |||||||| Sbjct 108 GACCAGACUCAAUCGCUGGUAAGUCGCAAACUUC-UCCUCCAUUCUAGUUUAAACUCUGUGUGUGUGUGUGUGUGUGUGUGAG 189 >> URS000279D6B7_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.3e+4 Identity: 54.46% Query coverage: 26.40% Gaps: 20.79% Alignment: Query 141 UUGGGCAUCUCUU----------AAAACUUUGAGGUGUGUGUAU-----------GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 ||||||||| || || |||||| || || | | | || |||| ||| || ||||| || | || Sbjct 1251 CUGGGCAUCUGUUUUCAAAUACACAAGCUUUGAACUGAGUCUGUUCAAAGAUGAAGAUGGUCUGAGUGUUUUCCAAUGCAAAUCCAGA 1338 Query 208 UAAAUGAACUUCU 220 | | ||||| | Sbjct 1339 UGAUGGAACUCUU 1351 >> URS0000EBB994_9606 Homo sapiens (human) HSALNT0276225 E-value: 1.4e+4 Identity: 54.24% Query coverage: 58.42% Gaps: 14.12% Alignment: Query 10 GACAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCA 98 |||||| || ||| || || ||| || || |||||| ||| || || | | ||| ||| | || | || || Sbjct 1565 GACAUCUAG-CCUCCAGAACUGUGA-GACAAUAAGUUCCUGUUGUUUUAAGAUAUCCAGGUUUUGAUUAUUUGUUA----UGGUAGCCU 1647 Query 99 UAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGG 186 ||| ||| | ||||| || || | || | | ||||| | |||||||| ||| |||||| | Sbjct 1648 --AGAAAUUUA------ACACAGACCCUCCUCCCAACCU-----G------AGUCAAAACAAUUGUGUGUGUGUGUGUGUGUGUGUGU 1716 >> URS0001980F95_10090 Mus musculus predicted gene, 46841 (Gm46841) E-value: 1.4e+4 Identity: 52.91% Query coverage: 64.36% Gaps: 9.22% Alignment: Query 78 UUGCUAUAUACAUACUAUCCAUAAGACC--UUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUG-GGCAUCU--------CUUA 154 | |||||| | | || | ||| | ||||| || ||| | |||| || ||| | |||| | | | Sbjct 4189 UGGCUAUAAAUACGGUAGUUAAGAGAACAGUUUUACAGC-----AGAGUUGACUG---UGACAGACAGCGGCAGUUUGUAUGAGUUCA 4268 Query 155 AAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGU 242 || |||| | | ||| || || | ||| ||| | || || |||| ||| ||| || ||| ||| Sbjct 4269 CAAGUUUGUGCUUUGUUAGUGGUGGUAGGGUAGUUGACAGUUACAAAUAUGGAUUGCUGAUGAUCUUGCUGCCUCUCUGAUUUUCUUA 4356 Query 243 CCUGUGACAUUCUGUGAUGUAGUCGUUAUU 272 || ||||| || ||| ||| ||| || Sbjct 4357 ACUCUGACAGUCACUGAAAUAGCAGUUCUU 4386 >> URS00009BDBD9_10090 Mus musculus long non-coding RNA NONMMUT086606.1 E-value: 1.4e+4 Identity: 57.84% Query coverage: 31.35% Gaps: 6.86% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAA--CUUCUGAUUGUAAUUCUAGCCU-----UCCGUCCUG 246 |||||| ||| ||||||| |||| | |||| || | | || | | |||| ||| | |||| || |||| Sbjct 110 UGUGUGUAUAUACAUGUGUGUGGGUACAUGGGUGCAUAUGCAUGUGAAGGUAAGAGACUGACUGUCCAGCAAGCCAGAGGGGCCCACCUG 199 Query 247 UGACAUUCUGUG 258 || |||||| Sbjct 200 UGUUCCUCUGUG 211 >> URS00009B683F_10090 Mus musculus long non-coding RNA NONMMUT032877.2 E-value: 1.4e+4 Identity: 60.26% Query coverage: 25.74% Gaps: 11.54% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGU 242 |||||||| ||| |||||| | ||| + ||||| |++| | ||||| ||||| +|||| ||+| | Sbjct 370 GUGUGUGUGUGUGUGUGUGUGUGUUUCAAGAUGA-GACCCAGGAAAAUGGACUUCA--------CUCUACGCUCCUGA 438 >> URS0000ED4A97_5661 Leishmania donovani gene:LdHU3.17.0400(CDS-product:receptor-type_aden ylate_cyclase_putative) E-value: 1.4e+4 Identity: 50.94% Query coverage: 49.17% Gaps: 13.84% Alignment: Query 85 AUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACU-GCGG-------UGCUAGAUUGGGCAUCUCUUAAAACUUUGAG- 164 |||||||| || || | | || | |||||| | | || | || |||||| || | | Sbjct 4709 AUACAUAC-AUACACAG-----------GUAACCGUGCCUCUACCUGAGCCGAUGUAUGGACGCAUGUGCAUCUAUUUAUAGGCAUGUG 4785 Query 165 -GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUA 233 ||||||| | ||||||| || | | ||| | || | || || | || |||| |||| Sbjct 4786 UAUGUGUGUGUACAUGUGUGCGGCUGAAUGCAUGUAUAUAUAUGUGCGUGUACAUGUGCAUGUAUCUCUA 4855 >> URS0000E44DF0_4113 Solanum tuberosum (potato) tRNA-Lys E-value: 1.4e+4 Identity: 66.10% Query coverage: 19.47% Gaps: 1.69% Alignment: Query 69 CCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUA 127 | || | ||||||| | || |||||||||||| | ||| | || | ||| | | Sbjct 18 CUUUCAUUUUUGCUCUGUAG-GGCUAUCCAUAAGAUCAUUUGGCGAGGUUCAGCCCUCA 75 >> URS0000BC6585_34839 Chinchilla lanigera (Long-tailed chinchilla) lncRNA (ENSCLAG00000027176.1) E-value: 1.4e+4 Identity: 58.82% Query coverage: 33.33% Gaps: 7.84% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUA-GCCUUCCGUCCUGUGACAUU 253 |||||||| ||| ||||||| ||| | |||| | | | ||||| || | | |||| || || |||| | Sbjct 799 GUGUGUGUGUGUGUGUGUGAAGGUGA-------CACACAGGAAGUAGCAAACUUUUGCGGGGACUUCUGCGCUUUAAACCCUGCAUCUCC 881 Query 254 CUGUGAUGUAGU 265 || | ||| ||| Sbjct 882 CUCUAAUGCAGU 893 >> URS00019691E2_7950 Clupea harengus (Atlantic herring) lncRNA (ENSCHAG00000010423.1) E-value: 1.4e+4 Identity: 70.45% Query coverage: 14.52% Gaps: 0.00% Alignment: Query 157 ACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCAC 200 | | |||||||||| ||| |||||| | || |||| || | Sbjct 276 AUUCAAAGGUGUGUGUGUGUGUGUGUGUGUGUGUUCAGCAGCUC 319 >> URS00022B1B90_9555 Papio anubis (olive baboon) lncRNA (ENSPANG00000050871.1) E-value: 1.4e+4 Identity: 53.60% Query coverage: 40.59% Gaps: 13.60% Alignment: Query 143 GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUA 233 | ||||| |||||||||||||| ||| | || |||| | || | |||| | | |||||| ||| | | Sbjct 129 GCACAUCUAGUAAAACUUUGAGGUUUGUUUUAUCUUGAGUGAA------CCACUGAAUC----UAUAACUAACAAACUGAUUUUAAAGCAA 209 Query 234 --GCCUUCCGUCCUGUGACAUUCUGUGAUGUAGU 265 || | || | | | ||| ||| || Sbjct 210 CAGCUUCCCCU-----GGAGCCCAGUGCUGUGGU 238 >> URS0000EC7AF8_191816 Lynx pardinus (Spanish lynx) non-coding RNA E-value: 1.4e+4 Identity: 62.12% Query coverage: 20.46% Gaps: 6.06% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU--G--AACUUCUGAUUGU 226 |||||||||||||| ||| |+ ||| |||||||+| | | |+ | || || || | | Sbjct 100542 GUGUGUGUAUGUAUAAGUGCAUGCAUGCAGGUGCACAUCCACAAACACAUGCAAAAUUUUGCAUAU 100607 >> URS00026EB001_74358 Podarcis lilfordi non-coding RNA E-value: 1.4e+4 Identity: 65.91% Query coverage: 14.52% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU 208 |||||||| ||| |||||| | || || | |||| | | Sbjct 14 GUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACACAC 57 >> URS0002622A23_6689 Penaeus vannamei (Pacific white shrimp) small nucleolar RNA SNORA23 E-value: 1.4e+4 Identity: 70.59% Query coverage: 15.84% Gaps: 5.88% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAU---CAGAUGCACAUUCGGAUAAAU 212 |||||||| |||||||||| | ||||| |||| |||| | | | | Sbjct 30 GUGUGUGUGUGUAUGUGUGUGUGUUAUAUACAGACACACACACACACACAC 80 >> URS00025F2346_9031 Gallus gallus (chicken) lncRNA (ENSGALG00010025646.1) E-value: 1.4e+4 Identity: 54.78% Query coverage: 37.95% Gaps: 11.30% Alignment: Query 118 CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 |||||| || | | | || | | | || || |||| | | | | || | |||| ||||||||| || Sbjct 14484 CCAGACACUGCACAGCUACUGGUUAGA--UGCUUUUCAAACCU--------G---UUUUCUGCCUCAGGGCUAUCAGAUGUGCAGCU 14557 Query 205 GGAUAAAUGAACUUCUGAUUGUAAUUCU 232 | || || || ||||| ||||| Sbjct 14558 GAGGUAAAGAUUUUUCCAUUGUCAUUCU 14585 >> URS000240F727_3641 Theobroma cacao (cacao) long non-coding RNA (TCAC_LNC005471) E-value: 1.4e+4 Identity: 53.51% Query coverage: 32.34% Gaps: 15.79% Alignment: Query 90 UACUAUCCAUAAGACCUUUUAGAGAUGCCC----AGACUC--UACUGCGGUGCUAGAUUGGGCA----------UCUCUUAAAACUU 160 | || || |||||||| | | || | | || | | || ||| | | |||| | | || ||| | Sbjct 88974 UCACAUUCACUAGACCUUUAGUAUAGGCUCUAACAUACGCCACAUUGUGGUUCACACUAAGGCACACAUACACAUUGCAUAUAACAU 89060 Query 161 UGAGGUGUGUGUAUGUAUGUGUGAGGG 187 |||||||| ||| |||||| | | Sbjct 89061 AU--GUGUGUGUGUGUGUGUGUGCGUG 89085 >> URS00027CD3B1_74358 Podarcis lilfordi non-coding RNA E-value: 1.4e+4 Identity: 64.71% Query coverage: 16.17% Gaps: 3.92% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUA--UCAGAUGCACAUUCGGAUAAAUG 213 |||||||| ||| |||||| | | || | |||| || ||| || Sbjct 70 GUGUGUGUGUGUGUGUGUGCGCGCACACACACACACACACACGUAUACAUA 120 >> URS0000CCF7DA_10116 Rattus norvegicus uncharacterized LOC108349521 E-value: 1.4e+4 Identity: 55.96% Query coverage: 32.34% Gaps: 13.76% Alignment: Query 86 UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUG-----------CGGUGCUAGAUUGGGCAUCUCUUAAAACUUUG 162 |||| | | |||||| || ||| || | | || |||| | ||| |||| || || | | | | | Sbjct 7492 UACAGAAAAAAAAUAAGAUUUU---AAGAAGCUCUG-CUGGACUGCCUGUGUGGCUCAGUGAUAGAAUGUGCGCCCCCCCCACCGUGU 7575 Query 163 AGGUGUGUGUAUGUAUGUGUG 183 |||||||| ||| |||||| Sbjct 7576 GUGUGUGUGUGUGUGUGUGUG 7596 >> URS00022EC578_9031 Gallus gallus (chicken) non-coding RNA E-value: 1.4e+4 Identity: 54.79% Query coverage: 58.42% Gaps: 11.17% Alignment: Query 34 AUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUA--AUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCC 118 | | | || |||||||| | || ||| ||| ||| ||||| ||| | | | | ||| | | | || Sbjct 18393 AAGGAGACAAGUUCCAUUG-----AAGAUUGCUACUUCUUAUGUCCUUGCUUCUUAC-UGCAUUGUAGAAGGGCACGCAUGUAAGCU 18473 Query 119 CAGACUCUACUGC----GGUG-C----UAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAU 196 || || |||| |||| | | || || | | ||| || | | |||| || ||| |||||| |||| || || Sbjct 18474 CAUUUCCUUCUGCUAGGGGUGGCUUUGUGGAGUGUGAAGCUCCUAG----UGGCUGUGUCUGGCUGUUUGUGUGUUGGUUCUCCCAU 18556 Query 197 GCACAUUCGGAUAA 210 ||||| | || Sbjct 18557 GCACAGCCUCCCAA 18570 >> URS00023BC7D9_4513 Hordeum vulgare (H. vulgare) long non-coding RNA (HVUL_LNC012771) E-value: 1.4e+4 Identity: 68.33% Query coverage: 19.14% Gaps: 3.33% Alignment: Query 136 CUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGU--AUGUAUGUGUGAGGGUUAUCA 193 |||| | |||| | || ||||||| |||| || ||| | |||||| | | |||| Sbjct 39561 AUAGAGUCAUCAUCGUUCUAAGCUUUGAGUUGUGAGUAAAUGAAAGUGUGAUGAUCAUCA 39620 >> URS000234E509_42345 Phoenix dactylifera (date palm) long non-coding RNA (PDAC_LNC016350) E-value: 1.4e+4 Identity: 67.86% Query coverage: 18.48% Gaps: 1.79% Alignment: Query 159 UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGA 214 | | |||||| ||| |||||||| | | |||| || |||| ||| |||| Sbjct 616 CAUAUAGAGUGUGUGUGUGUGUGUGAGAGAGA-GAGAUACAUAUUCCCAUAUAUGA 670 >> URS000276249D_74358 Podarcis lilfordi non-coding RNA E-value: 1.4e+4 Identity: 61.33% Query coverage: 23.43% Gaps: 5.33% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAU----CAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 ||||||| ||| |||||| | ||| | || |+|||||| | || | | || || | ||| | | | Sbjct 14980 UGUGUGUGUGUGUGUGUGUGUGUUUUCACACAAACGCACAUGCUGAAAGUUUAAUAUCACAAGGUAGAUUAGGUC 15054 >> URS00026DE48A_74358 Podarcis lilfordi non-coding RNA E-value: 1.4e+4 Identity: 68.18% Query coverage: 14.52% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU 208 |||||||| ||| |||||| | || || |+ ||||+ | || Sbjct 2564 GUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACACAU 2607 >> URS0001959652_9544 Macaca mulatta (Macaque) lncRNA (ENSMMUG00000057350.1) E-value: 1.4e+4 Identity: 54.03% Query coverage: 40.26% Gaps: 13.71% Alignment: Query 143 GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUC 231 | ||||| |||||||||||||| ||| | || |||| | | || | |||| | | |||||| ||| | Sbjct 1010 GCACAUCUAGUAAAACUUUGAGGUUUGUUUUAUCUUGAGUGAACCU---CUGAAUC-------UAUAACUAACAAACUGAUUUUAAAGC 1088 Query 232 UA--GCCUUCCGUCCUGUGACAUUCUGUGAUGUAG 264 | || | || | | | ||| ||| | Sbjct 1089 AACAGCUUCCCCU-----GGAGCCCAGUGCUGUGG 1118 >> URS0000D601F0_9597 Pan paniscus (bonobo) lncRNA (ENSPPAG00000044733.1) E-value: 1.4e+4 Identity: 57.35% Query coverage: 20.46% Gaps: 8.82% Alignment: Query 168 UGUGUAUGUAU------GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAU 229 ||||||||| | ||||| | | || || || | | ||| || || ||| | || | Sbjct 629 UGUGUAUGUGUGUGUGUGUGUGUGCAUGCCCACAUACAUGUAUGCAUACAUAUACAUCUUACUGAAUC 696 >> URS00025F49A1_9031 Gallus gallus (chicken) lncRNA (ENSGALG00010025646.1) E-value: 1.4e+4 Identity: 54.78% Query coverage: 37.95% Gaps: 11.30% Alignment: Query 118 CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 |||||| || | | | || | | | || || |||| | | | | || | |||| ||||||||| || | Sbjct 1090 CCAGACACUGCACAGCUACUGGUUAGA--UGCUUUUCAAACCU--------G---UUUUCUGCCUCAGGGCUAUCAGAUGUGCAGCUGA 1165 Query 207 AUAAAUGAACUUCUGAUUGUAAUUCU 232 || || || ||||| ||||| Sbjct 1166 GGUAAAGAUUUUUCCAUUGUCAUUCU 1191 >> URS00022AE969_9483 Callithrix jacchus (white-tufted-ear marmoset) lncRNA (ENSCJAG00000079663.1) E-value: 1.4e+4 Identity: 59.77% Query coverage: 26.40% Gaps: 8.05% Alignment: Query 106 UUUUAGAGAUGCCCAGACUCUACUGCG--GUG---C--UAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 | | ||||||||| |||| | | || | | | | ||| | ||| |||| || |||||| ||||| |||| | Sbjct 822 UGCUUCAGAUGCCCAUUUUCUAGUCCACAAUGUUCCAAUUGUUAGGGAAGAGACAUAAAAUUUGUGGCGUGUGUGUGUAUAUGUGUG 908 >> URS00025EC1EC_9031 Gallus gallus (chicken) lncRNA (ENSGALG00010025646.1) E-value: 1.4e+4 Identity: 54.78% Query coverage: 37.95% Gaps: 11.30% Alignment: Query 118 CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 |||||| || | | | || | | | || || |||| | | | | || | |||| ||||||||| || Sbjct 14766 CCAGACACUGCACAGCUACUGGUUAGA--UGCUUUUCAAACCU--------G---UUUUCUGCCUCAGGGCUAUCAGAUGUGCAGCU 14839 Query 205 GGAUAAAUGAACUUCUGAUUGUAAUUCU 232 | || || || ||||| ||||| Sbjct 14840 GAGGUAAAGAUUUUUCCAUUGUCAUUCU 14867 >> URS00023E221F_4513 Hordeum vulgare (H. vulgare) long non-coding RNA (HVUL_LNC012771) E-value: 1.4e+4 Identity: 68.33% Query coverage: 19.14% Gaps: 3.33% Alignment: Query 136 CUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGU--AUGUAUGUGUGAGGGUUAUCA 193 |||| | |||| | || ||||||| |||| || ||| | |||||| | | |||| Sbjct 39609 AUAGAGUCAUCAUCGUUCUAAGCUUUGAGUUGUGAGUAAAUGAAAGUGUGAUGAUCAUCA 39668 >> URS00025EDEA9_9031 Gallus gallus (chicken) lncRNA (ENSGALG00010025646.1) E-value: 1.4e+4 Identity: 54.78% Query coverage: 37.95% Gaps: 11.30% Alignment: Query 118 CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 |||||| || | | | || | | | || || |||| | | | | || | |||| ||||||||| || | Sbjct 3378 CCAGACACUGCACAGCUACUGGUUAGA--UGCUUUUCAAACCU--------G---UUUUCUGCCUCAGGGCUAUCAGAUGUGCAGCUGA 3453 Query 207 AUAAAUGAACUUCUGAUUGUAAUUCU 232 || || || ||||| ||||| Sbjct 3454 GGUAAAGAUUUUUCCAUUGUCAUUCU 3479 >> URS0000EAD4E8_9606 Homo sapiens (human) HSALNT0123332 E-value: 1.5e+4 Identity: 58.06% Query coverage: 30.03% Gaps: 13.98% Alignment: Query 112 AGAUGCCCAGACUCUACUGCG-GUGCUAGAUUGGGCAUCUCUUAAAACUUU-GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGC 198 || |||||| || || |||| ||| | || ||| | |||||| |||||||||||| | || | |||| Sbjct 1071 GUAUUUCCAGACAGCACAGCCUGUGC-----------UCUAUGAACACUGUUUGUGUGUGUCUAUGUAUGUGUGUGUGUGCUUGCAUGC 1148 Query 199 ACAU 202 | | Sbjct 1149 AUCU 1152 >> URS0000D588F1_9606 Homo sapiens (human) non-protein coding lnc-PAPD7-2:9 E-value: 1.5e+4 Identity: 60.00% Query coverage: 19.80% Gaps: 0.00% Alignment: Query 199 ACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 || | | || |||||| | ||||| | | |||| || | |||| | ||| | Sbjct 5788 UUAUAAGAAGAAGAGAACUUGAGCUUGUACUCCCAGCCCCUCGCCAUGUGGUCUCCUGGG 5847 >> URS0000D5D677_9606 Homo sapiens (human) non-protein coding lnc-PAPD7-2:10 E-value: 1.5e+4 Identity: 60.00% Query coverage: 19.80% Gaps: 0.00% Alignment: Query 199 ACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 || | | || |||||| | ||||| | | |||| || | |||| | ||| | Sbjct 3105 UUAUAAGAAGAAGAGAACUUGAGCUUGUACUCCCAGCCCCUCGCCAUGUGGUCUCCUGGG 3164 >> URS0000D5D892_9606 Homo sapiens (human) non-protein coding lnc-PAPD7-2:8 E-value: 1.5e+4 Identity: 60.00% Query coverage: 19.80% Gaps: 0.00% Alignment: Query 199 ACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 || | | || |||||| | ||||| | | |||| || | |||| | ||| | Sbjct 3685 UUAUAAGAAGAAGAGAACUUGAGCUUGUACUCCCAGCCCCUCGCCAUGUGGUCUCCUGGG 3744 >> URS00009C5C64_10090 Mus musculus long non-coding RNA NONMMUT037378.2 E-value: 1.5e+4 Identity: 63.77% Query coverage: 22.77% Gaps: 2.90% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUA 233 |||||||| ||| |||||| | |+ | || | ||||| | || | || | | | | | || +||+| Sbjct 95 GUGUGUGUGUGUGUGUGUGUGUGCAAAUAGCUACACAUACAGAAAUUUGUAUUGCAGUU--UAGCUCCA 161 >> URS0000AA3246_10090 Mus musculus (mouse) predicted gene, 54603 (ENSMUSG00002075933.1) E-value: 1.5e+4 Identity: 66.67% Query coverage: 15.84% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 |||||||| ||| |||||| | || || | |||| | ||| | Sbjct 25 UGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACAUACA 72 >> URS00009AEC89_10090 Mus musculus long non-coding RNA NONMMUT034953.2 E-value: 1.5e+4 Identity: 61.63% Query coverage: 25.74% Gaps: 10.47% Alignment: Query 115 UGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAA--------AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUC 192 ||||||||| ||| | || || || |||| || || | | || |||||||| ||| |||||| | || | | Sbjct 3330 AACCCAGACUC-ACUAGGAUGUUAAAUACUUCAUCACUGAACUAUAUUCAUCCAUGUUGUGUGUGUGUGUGUGUGUGUGUGUGAGC 3414 >> URS00023A0ADF_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002466) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 44131 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAA 44216 Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGU 262 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | |||| Sbjct 44217 UUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGU 44298 Query 263 AGUCGUUAUUC 273 | || ||| Sbjct 44299 AAUCUGAAUUG 44309 >> URS00023AC328_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002473) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 220287 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGU 220370 Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | Sbjct 220371 AAUUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUU 220450 Query 259 AUGUAGUCGUUAUUC 273 ||||| || ||| Sbjct 220451 AUGUAAUCUGAAUUG 220465 >> URS00023D88A6_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002471) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 223088 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGU 223171 Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | Sbjct 223172 AAUUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUU 223251 Query 259 AUGUAGUCGUUAUUC 273 ||||| || ||| Sbjct 223252 AUGUAAUCUGAAUUG 223266 >> URS000272710B_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.5e+4 Identity: 59.14% Query coverage: 30.03% Gaps: 3.23% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAU--UGUAAUUCUAGCCUUCCGUCCUGUGACA 251 ||||||| ||| |||||| | | || | |||| | ||| ||| ||| || || | ||| | ||| | ||| Sbjct 6020 UGUGUGUGUGUGUGUGUGUGUGGCUCCAUACAAGGAUUCUGCAAAAAGAAACCAUGACAACGUGGUUGUUACCUCCAAUCC-AUCACA 6106 Query 252 UUCUG 256 |||| Sbjct 6107 AUCUG 6111 >> URS0000E696C5_93934 Coturnix japonica (Japanese quail) lncRNA (ENSCJPG00005015627.1) E-value: 1.5e+4 Identity: 53.78% Query coverage: 39.27% Gaps: 20.17% Alignment: Query 43 AGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCG 132 || |||||||||| || |||||| |||||| || | || | | | |||| ||| ||| Sbjct 723 AGCUCCAUGGGUU-------UAACAUCCUUCUGCUUUGCUGUAAGUA-----------AG------UGGCUACCUCCAGCUUCUCUUGCU 788 Query 133 GUGCUAGAUUGGGCAUCUCUUAAAACUUU 161 || ||| || ||| ||||| ||| || Sbjct 789 AUGGUAGUCUGAGCACCUCUUGAAAUAUU 817 >> URS0002402B98_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002479) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 112970 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGU 113053 Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | Sbjct 113054 AAUUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUU 113133 Query 259 AUGUAGUCGUUAUUC 273 ||||| || ||| Sbjct 113134 AUGUAAUCUGAAUUG 113148 >> URS00024121BF_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002480) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 92853 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAA 92938 Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGU 262 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | |||| Sbjct 92939 UUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGU 93020 Query 263 AGUCGUUAUUC 273 | || ||| Sbjct 93021 AAUCUGAAUUG 93031 >> URS00027479E1_74358 Podarcis lilfordi non-coding RNA E-value: 1.5e+4 Identity: 71.05% Query coverage: 12.54% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 |||||||| ||| |||||| | || || | |||| Sbjct 27 GUGUGUGUGUGUGUGUGUGUGUGUAUACACACACACAC 64 >> URS00026E0211_74358 Podarcis lilfordi non-coding RNA E-value: 1.5e+4 Identity: 66.67% Query coverage: 16.83% Gaps: 7.84% Alignment: Query 159 UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUA 209 |||| |||||||| ||| |||||| | || || | |||| ||| Sbjct 7 UUUGGUGUGUGUGUGUGUGUGUGUGUGUGUAGACACACACACA----CAUA 53 >> URS000238127B_157791 Vigna radiata (V. radiata) long non-coding RNA (VRAD_LNC007434) E-value: 1.5e+4 Identity: 52.78% Query coverage: 42.90% Gaps: 16.67% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG----GAUAAAUGAACUU-------CUGAUUGUAAUUCUAGCCUUCCGUC 243 ||||||| ||| ||||||| | ||| | | ||| || || | | || ||| ||| || || ||| Sbjct 760 UGUGUGUGUGUGUGUGUGAAGAAUAUUUCAGGUGCAUGCGCAAAGACAGAAGAGCUUGAUUUUAUUGAGUGCAAACUAAGC-------- 840 Query 244 CUGUGACAUUCUGUGAUGUAGUCGU---UAUUCAGUGAUAUAAUGAAUCUCACCU 295 ||||| | | | ||| || | | ||| || || ||||||| Sbjct 841 --AUGACAAACCCUAAAGUAAGUGUUGCUCCCCCUUGACAUCAUUCCACUCACCU 893 >> URS00023D4CCF_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002472) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 118946 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGU 119029 Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | Sbjct 119030 AAUUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUU 119109 Query 259 AUGUAGUCGUUAUUC 273 ||||| || ||| Sbjct 119110 AUGUAAUCUGAAUUG 119124 >> URS0002402754_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002480) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 92854 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAA 92939 Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGU 262 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | |||| Sbjct 92940 UUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGU 93021 Query 263 AGUCGUUAUUC 273 | || ||| Sbjct 93022 AAUCUGAAUUG 93032 >> URS00023BDC14_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002478) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 120744 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGU 120827 Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | Sbjct 120828 AAUUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUU 120907 Query 259 AUGUAGUCGUUAUUC 273 ||||| || ||| Sbjct 120908 AUGUAAUCUGAAUUG 120922 >> URS0002380FEC_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002476) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 159327 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGU 159410 Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | Sbjct 159411 AAUUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUU 159490 Query 259 AUGUAGUCGUUAUUC 273 ||||| || ||| Sbjct 159491 AUGUAAUCUGAAUUG 159505 >> URS00026D6694_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.5e+4 Identity: 58.54% Query coverage: 27.06% Gaps: 12.20% Alignment: Query 107 UUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 | |||| || | |||+ +|| || | ||||+|| | | ||| | |||||||| ||| |||||| | || Sbjct 509 GUGAGAGCUGAACUGACCACACACAGGGGUUAGACUGACCUUAUCUG-------U---GUGUGUGUGUGUGUGUGUGUGUGU 580 >> URS00027235C0_74358 Podarcis lilfordi non-coding RNA E-value: 1.5e+4 Identity: 70.00% Query coverage: 13.20% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 |||||||| ||| |||||| | || || | |||| | Sbjct 13 GUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACAC 52 >> URS00023CFF2D_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002470) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 64279 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAA 64364 Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGU 262 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | |||| Sbjct 64365 UUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGU 64446 Query 263 AGUCGUUAUUC 273 | || ||| Sbjct 64447 AAUCUGAAUUG 64457 >> URS00027EF457_9793 Equus asinus (ass) lncRNA (ENSEASG00005029897.1) E-value: 1.5e+4 Identity: 55.38% Query coverage: 42.90% Gaps: 10.00% Alignment: Query 90 UACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 | |||| | |||||| | | |||||| | | || | | ||||| || | || | | ||| ||||| Sbjct 9571 UGCUAUAUUUGUGACCUUAU--AUAUGCCCU---------GAGCUGGUGAAGUGGGCUCUACUCAUUACAA--AUAUAUGUAUAUGUGC 9646 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUC 219 ||||| | || ||| | || | | | |||| | |||| Sbjct 9647 GUGUGUGUGUCUUCAUAAACAUACUAGAAUAAUCUAUCUUC 9687 >> URS0002244B66_122909 Androctonus crassicauda non-coding RNA E-value: 1.5e+4 Identity: 67.24% Query coverage: 19.14% Gaps: 6.90% Alignment: Query 120 AGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUA 177 | | | |||||| || | |||||| | |||| | |||| | ||||||| || | Sbjct 287 AAAAUAUACUGCAGUUC----UUGGGCCUUUCUUGCCAAUUUGUGAUGUGUGUGUGAA 340 >> URS00025F1443_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000103083.1) E-value: 1.5e+4 Identity: 58.41% Query coverage: 34.32% Gaps: 12.39% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCA---CAUUCGGAUAAAUGAACU------UCUGAUUGUAAUUCUAGCCUUCCGUCC 244 ||||||||||| || | ||| | | ||| | | |||||| | ||| | || |||||| || |||| Sbjct 1011 AUGUGUGUAUGUGUGAGAGAGAGAGA-GAGAGGUAGAGUCUUCGGAGCGAAACACUAAGCUGACAGAACGUAAUUUUAACCUUU---GU 1095 Query 245 UGUGACAUUCUGUGAUGUAGUCGU 268 ||||||| | | ||| |||| | Sbjct 1096 UGUGACAGUUUCUGACA-AGUCUU 1118 >> URS0002404403_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC004466) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 21222 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAA 21307 Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGU 262 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | |||| Sbjct 21308 UUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGU 21389 Query 263 AGUCGUUAUUC 273 | || ||| Sbjct 21390 AAUCUGAAUUG 21400 >> URS00023CFDBF_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002482) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 35084 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAA 35169 Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGU 262 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | |||| Sbjct 35170 UUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGU 35251 Query 263 AGUCGUUAUUC 273 | || ||| Sbjct 35252 AAUCUGAAUUG 35262 >> URS000237BF24_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC004466) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 21222 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAA 21307 Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGU 262 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | |||| Sbjct 21308 UUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGU 21389 Query 263 AGUCGUUAUUC 273 | || ||| Sbjct 21390 AAUCUGAAUUG 21400 >> URS0000AAF94C_7897 Latimeria chalumnae (coelacanth) miRNA (ENSLACG00000021100.1) E-value: 1.5e+4 Identity: 63.83% Query coverage: 14.19% Gaps: 12.77% Alignment: Query 160 UUGAGGUGUGUGUAUGUAUGUGUGAGGGU----UAUCAGAUGCACAU 202 | |||||||||| ||| |||||| | || || | |||| Sbjct 7 U--AGGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUACACACACACAC 51 >> URS0002401D72_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002472) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 187798 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGU 187881 Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | Sbjct 187882 AAUUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUU 187961 Query 259 AUGUAGUCGUUAUUC 273 ||||| || ||| Sbjct 187962 AUGUAAUCUGAAUUG 187976 >> URS0001963AEF_7950 Clupea harengus (Atlantic herring) lncRNA (ENSCHAG00000023258.1) E-value: 1.5e+4 Identity: 70.69% Query coverage: 18.48% Gaps: 3.45% Alignment: Query 166 UGUGUGUAUGU--AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUG 221 ||||||||||+ ||||||| | || || | || ||||| ||| ||| || | || Sbjct 40 UGUGUGUAUGCAUAUGUGUGUGUGUGUUCUGGGGCCCAUUCACAUACAUGUACAUGUG 97 >> URS0000E74DC0_93934 Coturnix japonica (Japanese quail) lncRNA (ENSCJPG00005015627.1) E-value: 1.5e+4 Identity: 53.78% Query coverage: 39.27% Gaps: 20.17% Alignment: Query 43 AGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUG 130 || |||||||||| || |||||| |||||| || | || | | | |||| ||| || Sbjct 942 AGCUCCAUGGGUU-------UAACAUCCUUCUGCUUUGCUGUAAGUA-----------AG------UGGCUACCUCCAGCUUCUCUUG 1005 Query 131 CGGUGCUAGAUUGGGCAUCUCUUAAAACUUU 161 | || ||| || ||| ||||| ||| || Sbjct 1006 CUAUGGUAGUCUGAGCACCUCUUGAAAUAUU 1036 >> URS00025F0156_8030 Salmo salar (Atlantic salmon) lncRNA (ENSSSAG00000103083.1) E-value: 1.5e+4 Identity: 58.41% Query coverage: 34.32% Gaps: 12.39% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCA---CAUUCGGAUAAAUGAACU------UCUGAUUGUAAUUCUAGCCUUCCGUCC 244 ||||||||||| || | ||| | | ||| | | |||||| | ||| | || |||||| || |||| Sbjct 1011 AUGUGUGUAUGUGUGAGAGAGAGAGA-GAGAGGUAGAGUCUUCGGAGCGAAACACUAAGCUGACAGAACGUAAUUUUAACCUUU---GU 1095 Query 245 UGUGACAUUCUGUGAUGUAGUCGU 268 ||||||| | | ||| |||| | Sbjct 1096 UGUGACAGUUUCUGACA-AGUCUU 1118 >> URS00023B3316_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002470) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | | Sbjct 2898 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAAUU 2985 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUC 266 | || ||||| | ||||| | | | |||| |||||| || || | || ||| | ||||| || Sbjct 2986 UU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGUAAUC 3069 Query 267 GUUAUUC 273 ||| Sbjct 3070 UGAAUUG 3076 >> URS0000CCF6EB_10116 Rattus norvegicus uncharacterized LOC108352310 E-value: 1.5e+4 Identity: 62.79% Query coverage: 27.39% Gaps: 3.49% Alignment: Query 119 CAGACUCUACUGCGGUGCUAGAUUGGG-CAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGA--GGGUUAUCAGAUGCACA 201 || || ||| ||| || |+||| | | || |||||||||||| ||| | ||+|| ||| | || ||| | | | || Sbjct 689 AAGCCUGAACUCAGGUAUUACUUCGGGGAAGUUAUUUAAACUUUGAGGUUUGUUUCUGCAUCUGUUAAAUGGGUAUGAAAAGGGCA 774 >> URS00025FADF6_400727 Pomacea canaliculata (Apple snail) uncharacterized LOC112558214, transcript variant X2 E-value: 1.5e+4 Identity: 58.72% Query coverage: 35.97% Gaps: 5.50% Alignment: Query 82 UAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGU 168 ||||||| ||||| | || | | ||| ||| | | || | |||| | || | | ||| | | | | | ||| Sbjct 3279 AAUAUACAAACUAUU---AUAACUAAUAAUAGAAGCCACAAAU---UUGUGUUGCUGGUUUCGACCUCUUUCUCUUCAUGGUGAUGU 3359 Query 169 GUGUAUGUAUGUGUGAGGGUUA 190 |||||| ||||| || ||| Sbjct 3360 UUGUAUGCCUGUGUCAGUCUUA 3381 >> URS00023EF5FB_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002472) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 118995 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGU 119078 Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | Sbjct 119079 AAUUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUU 119158 Query 259 AUGUAGUCGUUAUUC 273 ||||| || ||| Sbjct 119159 AUGUAAUCUGAAUUG 119173 >> URS000241A636_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002475) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 116221 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGU 116304 Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | Sbjct 116305 AAUUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUU 116384 Query 259 AUGUAGUCGUUAUUC 273 ||||| || ||| Sbjct 116385 AUGUAAUCUGAAUUG 116399 >> URS00027F6208_9793 Equus asinus (ass) lncRNA (ENSEASG00005029897.1) E-value: 1.5e+4 Identity: 55.38% Query coverage: 42.90% Gaps: 10.00% Alignment: Query 90 UACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 | |||| | |||||| | | |||||| | | || | | ||||| || | || | | ||| ||||| Sbjct 8454 UGCUAUAUUUGUGACCUUAU--AUAUGCCCU---------GAGCUGGUGAAGUGGGCUCUACUCAUUACAA--AUAUAUGUAUAUGUGC 8529 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUC 219 ||||| | || ||| | || | | | |||| | |||| Sbjct 8530 GUGUGUGUGUCUUCAUAAACAUACUAGAAUAAUCUAUCUUC 8570 >> URS00022B29FA_9615 Canis lupus familiaris (dog) lncRNA (ENSCAFG00845009175.1) E-value: 1.5e+4 Identity: 64.62% Query coverage: 21.45% Gaps: 9.23% Alignment: Query 123 CUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGG 187 | ||| || | ||| || | | | | |||| || ||||||||| ||| |||||| | | Sbjct 4930 CACUAGUGAGAUGCCAGGU------CCCCAAAUAACUGUGGGGUGUGUGUGUGUGUGUGUGUGUG 4988 >> URS000284B62F_2023355 Schistocerca serialis cubense (Grasshoppers) uncharacterized LOC126441765 E-value: 1.5e+4 Identity: 53.33% Query coverage: 61.72% Gaps: 12.31% Alignment: Query 98 AUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAA----AACUUUGAGGUGUGUGUAUGUAUG 179 |||| || ||| | ||| ||| |||| || |||+ || || ||| |||| | ||| ||||| Sbjct 1101 UUAAGUCCGGUUAAAAAUGGAGUGAC------GCGGACCUUGAUCAAGCGUCACUUCCUUUUAACUGUACGGUAUGUGU------- 1173 Query 180 UGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUC-CUGUG---ACAUUCUGUGAUG 261 | | | | || ||||| ||| ||||| | | + ||||| + | ||| || |||| | || | |||| Sbjct 1174 ---UAUAUUGCAUUUAGGAACUUUCGGGUAAUUGAACAUGUAUCAAUAAUUACGGAUUUCUGUAGCUGUAUAUAUAUGUUUGGAUG 1256 Query 262 UAGUCGUUAUUCAGUGAUAUAAU 284 |||+ || | || |||| || | Sbjct 1257 UAGCUGUAUUGCAUUGAUGUACU 1279 >> URS0002368CA3_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC002481) E-value: 1.5e+4 Identity: 50.27% Query coverage: 58.75% Gaps: 4.92% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGU 176 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | Sbjct 38096 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAA 38181 Query 177 AUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGU 262 | | || ||||| | ||||| | | | |||| |||||| || || | || ||| | |||| Sbjct 38182 UUUU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGU 38263 Query 263 AGUCGUUAUUC 273 | || ||| Sbjct 38264 AAUCUGAAUUG 38274 >> URS0000D60059_9545 Macaca nemestrina (Pig-tailed macaque) lncRNA (ENSMNEG00000045577.1) E-value: 1.5e+4 Identity: 54.03% Query coverage: 40.26% Gaps: 13.71% Alignment: Query 143 GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUA 233 | ||||| |||||||||||||| ||| | || |||| | | || | |||| | | |||||| ||| | | Sbjct 331 GCACAUCUAGUAAAACUUUGAGGUUUGUUUUAUCUUGAGUGAACCU---CUGAAUC-------UAUAACUAACAAACUGAUUUUAAAGCAA 411 Query 234 --GCCUUCCGUCCUGUGACAUUCUGUGAUGUAG 264 || | || | | | ||| ||| | Sbjct 412 CAGCUUCCCCU-----GGAGCCCAGUGCUGUGG 439 >> URS0000EA7E13_9606 Homo sapiens (human) HSALNT0206375 E-value: 1.6e+4 Identity: 55.49% Query coverage: 49.83% Gaps: 17.68% Alignment: Query 35 UGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUU---GCUAUAUACAUACUAUCCAUAAGACC------UUUUAGAGA 114 | ||| | ||| ||| || || |||| |||||| || ||| ||| | | || |||| ||||| || || Sbjct 2322 UCAAACCCAGUCCCAAAGGCUGAAAAA---CUAUCCCAGAAGUUUUAAGCUUUUCAUGUAACAUCCU--AGACCAGCAACUUCAAG--- 2402 Query 115 UGCCCAGACUCU---ACUGCGGUGCUAGAUU-GGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 | | ||| || | | ||| ||| | |||||| | | |||| ||||| ||| |||| | Sbjct 2403 -UUCAAAACUUAAAGACAGAGUCCCUACAUUUGCACAUCUCAUG----UGCAAGGUAUGUGUGUGUGUGUG---G 2469 >> URS0000D5D092_9606 Homo sapiens (human) non-protein coding lnc-NMNAT3-1:5 E-value: 1.6e+4 Identity: 66.04% Query coverage: 17.49% Gaps: 0.00% Alignment: Query 167 GUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUC 219 |||||| ||| |||||| | || |||||||| | | | ||| || | Sbjct 298 GUGUGUGUGUCUGUGUGUGAGUGCAUGCAUGCACAUGAGCACAUAUGCACAUU 350 >> URS00025EDB3F_9606 Homo sapiens (human) novel transcript E-value: 1.6e+4 Identity: 70.59% Query coverage: 16.83% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAA 215 |||||||| ||| |||||| | ||||+||||| | | || ||| || Sbjct 918 GUGUGUGUGUGUGUGUGUGUGUGUUACCAGAUCAAUGAACUGAGAAAAGAG 968 >> URS00023460A9_9606 Homo sapiens (human) HSALNT0387363 E-value: 1.6e+4 Identity: 65.63% Query coverage: 20.79% Gaps: 1.56% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAA-CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||| |||| | |||| | ||| |||| ||| || | |||| || ||||||||| | Sbjct 3490 GACUUGGGUGUAAUAUUGAUGAACUCCAAAAAGCUUACUGGAGAGUGUGUGCAUGUGUGAGUGC 3553 >> URS00023453D6_9606 Homo sapiens (human) HSALNT0387364 E-value: 1.6e+4 Identity: 65.63% Query coverage: 20.79% Gaps: 1.56% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAA-CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||| |||| | |||| | ||| |||| ||| || | |||| || ||||||||| | Sbjct 3490 GACUUGGGUGUAAUAUUGAUGAACUCCAAAAAGCUUACUGGAGAGUGUGUGCAUGUGUGAGUGC 3553 >> URS0002337AB7_9606 Homo sapiens (human) HSALNT0387365 E-value: 1.6e+4 Identity: 65.63% Query coverage: 20.79% Gaps: 1.56% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAA-CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||| |||| | |||| | ||| |||| ||| || | |||| || ||||||||| | Sbjct 3490 GACUUGGGUGUAAUAUUGAUGAACUCCAAAAAGCUUACUGGAGAGUGUGUGCAUGUGUGAGUGC 3553 >> URS00023427CF_9606 Homo sapiens (human) HSALNT0387366 E-value: 1.6e+4 Identity: 65.63% Query coverage: 20.79% Gaps: 1.56% Alignment: Query 126 UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAA-CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU 188 ||| |||| | |||| | ||| |||| ||| || | |||| || ||||||||| | Sbjct 3490 GACUUGGGUGUAAUAUUGAUGAACUCCAAAAAGCUUACUGGAGAGUGUGUGCAUGUGUGAGUGC 3553 >> URS0000EAE614_9606 Homo sapiens (human) HSALNT0152867 E-value: 1.6e+4 Identity: 55.00% Query coverage: 37.95% Gaps: 17.50% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGA--GGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGA--- 249 |||||||| ||||| |||| ||| | || || | || ||||||| | || || ||| || || || Sbjct 181 UGUGUGUGUUUGUAUAUGUGGAGGGGAUCUCUGAGGG---------------AAUUUCUGAU-GCAAGUCCAGCAGGCCUAACUCAGAAAA 255 Query 250 CAUUCUGUGAUGUAGUCGUUAUUCAGUGA 278 | ||||| | | ||||||||| Sbjct 256 CCCUCUGUAAGUAUGGUCACAUUCAGUGA 284 >> URS00009B60E1_10090 Mus musculus long non-coding RNA NONMMUT037326.2 E-value: 1.6e+4 Identity: 55.56% Query coverage: 27.72% Gaps: 15.15% Alignment: Query 203 UCGGAUAAAUGAACUUCUGAUUGUAA-UUCUAGCCUU--------------CCGUCCUGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUG 277 || |||| | |||||| || || |||| | |+ || + |||||| | ||||||||| | | ||+|||||| Sbjct 665 UCAGAUACAGGAACUUUGGAGAGUGUGUUCUGGAGUCCUGAGUGAAAAGGACCACAUGGUGACAAUGUGUGAUGUACUUGAUACUCAGUG 754 Query 278 AUAUAAUGA 286 + |||| Sbjct 755 GCUGUAUGA 763 >> URS00009BB627_10090 Mus musculus long non-coding RNA NONMMUT119682.1 E-value: 1.6e+4 Identity: 62.50% Query coverage: 15.84% Gaps: 0.00% Alignment: Query 159 UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 | | |||||||| ||| |||||| | || || || || | | Sbjct 1732 UGCAACGUGUGUGUGUGUGUGUGUGUGUGUAUCCAUAUCCAUACACAC 1779 >> URS00009AD319_10090 Mus musculus long non-coding RNA NONMMUT068328.2 E-value: 1.6e+4 Identity: 64.37% Query coverage: 28.38% Gaps: 8.05% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGU-UAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACA 251 ||||||||||| ||||| || | | ||| | | | |||| |||||| || + | ||||| ||||||| || ||| Sbjct 98 UGUGUGUAUGUGUGUGUUAGAGAGUGGAAGAGGGUC-GUAGGAU-----AACUUCAGAACUUGAUUCUUGCCUUCCAGUGUGGGACC 178 >> URS00009C300C_10090 Mus musculus long non-coding RNA NONMMUT055117.2 E-value: 1.6e+4 Identity: 62.50% Query coverage: 15.84% Gaps: 0.00% Alignment: Query 159 UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGG 206 | | |||||||| ||| |||||| | || || || || | | Sbjct 3418 UGCAACGUGUGUGUGUGUGUGUGUGUGUGUAUCCAUAUCCAUACACAC 3465 >> URS00009B560D_10090 Mus musculus long non-coding RNA NONMMUT032902.2 E-value: 1.6e+4 Identity: 48.07% Query coverage: 50.50% Gaps: 18.23% Alignment: Query 90 UACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAG---AUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAU 174 |||| | | | | | | | | || | || | | ||| | || || || | || || | || ||| ||||| | Sbjct 1779 UACUGUUUACACAAACCUCUGGGGACCUUCCGAAUA-AAUGCAGAGCAAGUGAGUUAGACAAACCUCUGGGCCCUGUGGUCUGUGUGU 1865 Query 175 GUAUGUGUG----------AGGGUUA----------UCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGU-----AAUUCUAGCCU 237 || |||||| | |||| | ||| | | ||| | ||| | | | || ||||| Sbjct 1866 GUGUGUGUGUGUGUGUGUGUGUGUUAGUGUGGGGGAAACUUUCCACCCUUAGCUAA----GCCUCUACUCUUCAGUCCACUCCAGCCU 1949 Query 238 UCCGU 242 ||||| Sbjct 1950 UCCGU 1954 >> URS00027CF00E_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 1.6e+4 Identity: 63.41% Query coverage: 26.73% Gaps: 1.22% Alignment: Query 9 UGACAUCCAGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUA-AUUUUGCUAUAUACA 89 || ||||||| | | ||| || |||| | | || ||| |||| | |||||| ||| | || ||| |||| | Sbjct 71818 AGAAAUCCAGUUUCAUAUAAUUUUAGUGAAUAUGUGUGACAUUCUUUGCUGAGGUACUAUUCUUACUAAUUGGCUCUAUAUA 71899 >> URS00019C7847_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.6e+4 Identity: 67.35% Query coverage: 16.17% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 |||||||||||| | |||| | || || || ||||| | | | | Sbjct 16 GUGUGUGUAUGUGUAUGUGUGUGUACACACAUACACAUACACACACACA 64 >> URS0000CCF33A_10116 Rattus norvegicus uncharacterized LOC108352525 E-value: 1.6e+4 Identity: 52.87% Query coverage: 23.10% Gaps: 19.54% Alignment: Query 110 AGAGAUGCCCAGACUCUACUG-CGGUGC-------UAGAUUGGGCAUCUCUUAAAACU----UUGAG-----GUGUGUGUAUGUAUG 179 |||| || | ||| | || || | | |||| ||| ||||| | || | |||||||| ||| || Sbjct 268 AGAGGUGGCUUCUCUCACCACUCGAGGCAAAGAAGUCCCUGGGGCUUCUUUUAAAGGUGCCUGUGUGCCUGCGUGUGUGUGUGUGUG 354 >> URS00023C1FCC_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC000609) E-value: 1.6e+4 Identity: 57.73% Query coverage: 32.01% Gaps: 0.00% Alignment: Query 124 UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 | | ||| || ||| |||| | | | | | ||| |||| | |||||| ||| ||| |||| || | ||| Sbjct 120822 UAUGCUGUGGGGCUGUCCAAGGCAGAUUUGACGAUUCCAAGGGGUGUCGUUAUAUGUGCGAGUGUUGUCAGGAACAGGUGCGGG 120905 Query 208 UAAAUGAACUUCU 220 | ||| | || Sbjct 120906 AGGACGAAGUACU 120918 >> URS000278C538_74358 Podarcis lilfordi non-coding RNA E-value: 1.6e+4 Identity: 63.79% Query coverage: 19.14% Gaps: 8.62% Alignment: Query 142 UGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCA 199 || | || |||| || | | |||||||||| | |||||| | | || | || Sbjct 585 UGUGUAUUCCUUACAAUUGU---GUGUGUGUAUAUGUGUGUGCGUG--UACACACACA 637 >> URS00026C61E9_74358 Podarcis lilfordi non-coding RNA E-value: 1.6e+4 Identity: 64.58% Query coverage: 15.18% Gaps: 4.17% Alignment: Query 161 UGAGGUGUGUGUAUGUAUGUGUGA--GGGUUAUCAGAUGCACAUUCGG 206 || ||||||||| ||| |||||| | || || | |||| | Sbjct 8 UGUGGUGUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACAC 55 >> URS00022B0C57_10116 Rattus norvegicus (Norway rat) lncRNA (ENSRNOG00000069938.1) E-value: 1.6e+4 Identity: 55.17% Query coverage: 47.19% Gaps: 12.41% Alignment: Query 42 GAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUU-UGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUG 130 || | | || || ||| | || |||| || | || |||||| | ||| || ||| ||| | | |||| | Sbjct 284 GAUUCCUCUGUGUAGCA--CUGGCUGUCCUGGAACUGGCUCUGUAUACAAGGCUGGC-CUAGAACUCAGAGAUCUGC-CUGUCUCUGCCU 369 Query 131 CGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAG-GUGUGUGUAUGUAUGUGUGA 184 | |||| || ||||| || ||| | ||||| ||| |||||| Sbjct 370 CUCUGCUGGAA----------UUAAAGCUAAGAGUG--UGUGUGUGUGUGUGUGU 412 >> URS000277BDED_74358 Podarcis lilfordi non-coding RNA E-value: 1.6e+4 Identity: 67.39% Query coverage: 15.18% Gaps: 0.00% Alignment: Query 167 GUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 |||||| ||| |||||| | || || | |||| | | |||| Sbjct 12 GUGUGUGUGUGUGUGUGUGUGUGUGCACACACACACACACACAAAU 57 >> URS0001A08385_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.6e+4 Identity: 67.86% Query coverage: 17.49% Gaps: 5.36% Alignment: Query 134 UGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUG---UGUGUAUGUAUGUGUGAGG 186 | |||||||||||||| | | || ||| || ||||| ||||| || | | Sbjct 1026 UCAUAGAUUGGGCAUCUUACAUACCUGUGAUUUGAGAUGUGUUUGUAUCUGAGGGC 1081 >> URS000196ECB0_9823 Sus scrofa (pig) lncRNA (ENSSSCG00060078099.1) E-value: 1.6e+4 Identity: 58.12% Query coverage: 38.61% Gaps: 11.97% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUC 239 | ||| |||||||||||||| ||| |||||| | | | ||| |||| | | || |||| | | | || ||| Sbjct 4055 CAUAAGGUUUUGAGGUGUGUGUGUGUGUGUGUGUGUGGUG--AGA-GCACCUG-----AGAUCUACUUUUAAAAGCAA------AUUUC 4129 Query 240 CGUCCUGUGACAUUCUGUGAUGUAGUCG 267 || | ||| | | ||||| || Sbjct 4130 CGGCAUGUCGUAGAAUUAACUGUAGGCG 4157 >> URS000261AD93_2607531 Octopus sinensis (East Asian common octopus) uncharacterized LOC118765319, transcript variant X2 E-value: 1.6e+4 Identity: 66.07% Query coverage: 18.48% Gaps: 0.00% Alignment: Query 155 AAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 ||| | ||||||||| +|||||| |||| | | || |||||||+ | || Sbjct 586 AAAUUAAGAGGUGUGUACAUGUAUCUGUGUGUAUAUACAUAUGCACACACACAUCU 641 >> URS00027E9DD7_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015031418.1) E-value: 1.6e+4 Identity: 61.11% Query coverage: 22.11% Gaps: 20.83% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAAC--U---UCUGAUUGUAAUUC 231 ||||||||||| |||||||| |||||| ||| | | | || | || |||| |||| Sbjct 4129 GUGUGUGUAUGCGUGUGUGAG----------UGCACACUCGAACAUACAUACACUAACCUUGGUUGUCAUUC 4190 >> URS0001972ADB_9823 Sus scrofa (pig) lncRNA (ENSSSCG00060078099.1) E-value: 1.6e+4 Identity: 58.12% Query coverage: 38.61% Gaps: 11.97% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUC 239 | ||| |||||||||||||| ||| |||||| | | | ||| |||| | | || |||| | | | || ||| Sbjct 1430 CAUAAGGUUUUGAGGUGUGUGUGUGUGUGUGUGUGUGGUG--AGA-GCACCUG-----AGAUCUACUUUUAAAAGCAA------AUUUC 1504 Query 240 CGUCCUGUGACAUUCUGUGAUGUAGUCG 267 || | ||| | | ||||| || Sbjct 1505 CGGCAUGUCGUAGAAUUAACUGUAGGCG 1532 >> URS000276B710_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.6e+4 Identity: 56.52% Query coverage: 36.30% Gaps: 6.09% Alignment: Query 79 UGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCA----GACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUU 160 | | || ||| | ||| || | || | | || || || || | ||| | | | | || || ||| | Sbjct 70939 UUCAAUGGACACAUUAUGAAUCACGCCCUGCAAAGGAGCUCAUUCAGAGGCAUCUGUUACCCAACACU--GCUGCUGCCAAACGUG 71022 Query 161 UGAG-GUGUGUGUAUGUAUGUGUGAGGGU 188 || | |||||||| ||| |||||| ||| Sbjct 71023 UGUGUGUGUGUGUGUGUGUGUGUGUAGGU 71051 >> URS0002626B80_2652724 Exaiptasia diaphana (Sea anemone) putative protein TPRXL, transcript variant X3 E-value: 1.6e+4 Identity: 56.52% Query coverage: 44.55% Gaps: 3.62% Alignment: Query 165 GUGUGU---GUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 ||||| ||| |||| | |||| || ||||| | || ||| ||| | |||| || ||||| || || Sbjct 1776 AUGUGUGACGUAAUUAUGCGAUAGGGCAAUUGCUGUGUCAUUCUGU--AACCCUCUUGUGACUAUAAUCCUUACCUUCAAUCAUGC 1859 Query 248 GACAUUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAAUGAAUCUCACCUAUUG 299 | || | || ||| | || || || | ||| | | | | ||||| Sbjct 1860 AAUGUUUUAAUCUGACGUCAUAAUGCAAUGGUCCAAUAAGUUUAGCUUAUUG 1911 >> URS000261E905_210409 Portunus trituberculatus (Swimming crab) tax1-binding protein 1 homolog, transcript variant X4 E-value: 1.6e+4 Identity: 67.31% Query coverage: 17.16% Gaps: 7.69% Alignment: Query 159 UUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 | ||| |||||||| ||| |||||| | || ||| ||||| | | | Sbjct 3173 UAUGAUGUGUGUGUGUGUGUGUGUGUGUGU----AGAGGCACACACACACAC 3220 >> URS00026C4257_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 1.6e+4 Identity: 71.43% Query coverage: 16.17% Gaps: 0.00% Alignment: Query 163 AGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 | |||||||| ||| || | | | ||| || || ||||||| |||| Sbjct 1729 AUGUGUGUGUGUGUGUGCGCGCGCGUUUACAUAUCUACAUUCGUAUAAC 1777 >> URS0001972F88_9823 Sus scrofa (pig) lncRNA (ENSSSCG00005017402.1) E-value: 1.6e+4 Identity: 58.12% Query coverage: 38.61% Gaps: 11.97% Alignment: Query 151 CUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUC 239 | ||| |||||||||||||| ||| |||||| | | | ||| |||| | | || |||| | | | || ||| Sbjct 1430 CAUAAGGUUUUGAGGUGUGUGUGUGUGUGUGUGUGUGGUG--AGA-GCACCUG-----AGAUCUACUUUUAAAAGCAA------AUUUC 1504 Query 240 CGUCCUGUGACAUUCUGUGAUGUAGUCG 267 || | ||| | | ||||| || Sbjct 1505 CGGCAUGUCGUAGAAUUAACUGUAGGCG 1532 >> URS0002532CA6_61616 Pelobates cultripes (western spadefoot toad) non-coding RNA E-value: 1.6e+4 Identity: 70.45% Query coverage: 14.19% Gaps: 2.27% Alignment: Query 167 GUGUGUAUGUAUGUGUGAGGGU-UAUCAGAUGCACAUUCGGAUA 209 |||||| ||| |||||| | || ||||||| || | | | | Sbjct 14 GUGUGUGUGUGUGUGUGUGUGUGCAUCAGAUACAUACACAUACA 57 >> URS0000CF19F7_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 1.6e+4 Identity: 60.00% Query coverage: 29.37% Gaps: 4.44% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU-GAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAU 252 |||||||| ||| |||| | | | || ||||||| | | | | || ||| ||| || | | | ||| || |||| Sbjct 2088 GUGUGUGUGUGUGUGUGCGCGCGCGCGCAUGUGCACAUACUGCAAUCUUGACUUUCCAAUUACAAA---AUGCCUAAGUCAGGUCACAU 2173 Query 253 U 253 | Sbjct 2174 U 2174 >> URS000274D57D_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 1.6e+4 Identity: 62.67% Query coverage: 22.77% Gaps: 9.33% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG--AACUUCUGA----UUGUAAUUCU 232 |||||||| ||| |||||| | || | ||| ||| | |||| || ||| | | ||| ||| || Sbjct 5313 CGUGUGUGUGUGUGUGUGUGUGUGU-AAUAGACAUACAAACAGAUAGAUAUUCACUCUUUAUUUGUUGCAAUCCU 5386 >> URS0002764163_74358 Podarcis lilfordi non-coding RNA E-value: 1.6e+4 Identity: 68.18% Query coverage: 14.52% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU 208 |||||||| ||| |||||| | || || || |||| | | Sbjct 17 GUGUGUGUGUGUGUGUGUGUGUGUGUACACAUACACACACAUAC 60 >> URS0000CCE325_10116 Rattus norvegicus uncharacterized LOC102546302 E-value: 1.6e+4 Identity: 57.27% Query coverage: 35.31% Gaps: 13.64% Alignment: Query 79 UGCUAUAUA---CAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGG 165 |||| || || ||| || | |||| | ||| || | |||| | | || |||| |||||| | || Sbjct 76 CACUAUGUAAACCAGGCUA-CCCUCAGACUCACAAAAGACAGCCUGUCUCUGUCUC---CCAAGUGCUGGCA----UUAAAAGU----GG 153 Query 166 UGUGUGUAUGUAUGUGUGAG 185 ||||||| ||| |||||| | Sbjct 154 UGUGUGUGUGUGUGUGUGUG 173 >> URS00023BA665_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC009165) E-value: 1.6e+4 Identity: 64.00% Query coverage: 24.09% Gaps: 4.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAG--AUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCC 236 |||||||| ||| ||||||| | |||| | || ||| || || ||||| | |||| | || | | Sbjct 124 UGUGUGUGUCUGUGUGUGUGAUGAUUAUAUGGAAUUCACUCUCAGAA-GGCAUACUUCAGCUUGUGACUCGACCU 197 >> URS00023AFAC1_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC000610) E-value: 1.6e+4 Identity: 57.73% Query coverage: 32.01% Gaps: 0.00% Alignment: Query 124 UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 | | ||| || ||| |||| | | | | | ||| |||| | |||||| ||| ||| |||| || | ||| Sbjct 119599 UAUGCUGUGGGGCUGUCCAAGGCAGAUUUGACGAUUCCAAGGGGUGUCGUUAUAUGUGCGAGUGUUGUCAGGAACAGGUGCGGG 119682 Query 208 UAAAUGAACUUCU 220 | ||| | || Sbjct 119683 AGGACGAAGUACU 119695 >> URS00023D10E1_71139 Eucalyptus grandis (E. grandis) long non-coding RNA (EGRA_LNC000611) E-value: 1.6e+4 Identity: 57.73% Query coverage: 32.01% Gaps: 0.00% Alignment: Query 124 UCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 | | ||| || ||| |||| | | | | | ||| |||| | |||||| ||| ||| |||| || | ||| Sbjct 119032 UAUGCUGUGGGGCUGUCCAAGGCAGAUUUGACGAUUCCAAGGGGUGUCGUUAUAUGUGCGAGUGUUGUCAGGAACAGGUGCGGG 119115 Query 208 UAAAUGAACUUCU 220 | ||| | || Sbjct 119116 AGGACGAAGUACU 119128 >> URS0000CEF4E3_9601 Pongo abelii (Sumatran orangutan) antisense RNA E-value: 1.6e+4 Identity: 60.00% Query coverage: 29.37% Gaps: 4.44% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU-GAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAU 252 |||||||| ||| |||| | | | || ||||||| | | | | || ||| ||| || | | | ||| || |||| Sbjct 1426 GUGUGUGUGUGUGUGUGCGCGCGCGCGCAUGUGCACAUACUGCAAUCUUGACUUUCCAAUUACAAA---AUGCCUAAGUCAGGUCACAU 1511 Query 253 U 253 | Sbjct 1512 U 1512 >> URS0000D394D0_9598 Pan troglodytes (chimpanzee) processed transcript E-value: 1.6e+4 Identity: 53.79% Query coverage: 43.56% Gaps: 13.64% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCC 244 || ||| ||||||||||||||||| | ||||| | || ||||| |||| ||+ || |+||||| | Sbjct 1006 AAAUUUUUUGUGUGUGUAUGUAUGUGGGUGGGUUUUAAGG-------------GAAUGAGUUUCUUGAA--GAUCUUAUUCCUCCGUGC 1079 Query 245 UGUGACAUUCUGUGAUGUAGUCGUUAUUCAGUGAUAUAAUGAA 287 ||| | | |||||| +|| | | |+| || | Sbjct 1080 UGUCUU---UUUUUUUGUAGUUUCUAGACUGAAACAAAAAGCC 1119 >> URS0000EB9081_9606 Homo sapiens (human) HSALNT0024184 E-value: 1.7e+4 Identity: 59.76% Query coverage: 27.06% Gaps: 13.41% Alignment: Query 145 GCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGU 226 |||| | | |||| ||| |||||||||||| |||||| | || | ||| ||| || ||||+| | Sbjct 5732 GCAUAUAUAAAAAUAUUG-UGUGUGUGUAUGUGUGUGUGUGUGUGUACGC----------AUAUACAUGUACAGCUGACUCU 5802 >> URS00009AD678_10090 Mus musculus long non-coding RNA NONMMUT004473.2 E-value: 1.7e+4 Identity: 63.01% Query coverage: 22.44% Gaps: 6.85% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA-----UAAAUGAACUUCUGAU 223 || ||| | |||||| | | ||| || | || ||||| ||||| | | | |||||||||| | Sbjct 5493 AAGCAUGAUGAGUGUGUGUCUGUGUCUGUGUGUGUGCAGAUUCACAUGCAAAGGCCAGAUGUGAACUUCUGGU 5565 >> URS00009B6C39_10090 Mus musculus long non-coding RNA NONMMUT004472.2 E-value: 1.7e+4 Identity: 63.01% Query coverage: 22.44% Gaps: 6.85% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA-----UAAAUGAACUUCUGAU 223 || ||| | |||||| | | ||| || | || ||||| ||||| | | | |||||||||| | Sbjct 1652 AAGCAUGAUGAGUGUGUGUCUGUGUCUGUGUGUGUGCAGAUUCACAUGCAAAGGCCAGAUGUGAACUUCUGGU 1724 >> URS0000AA746A_10090 Mus musculus (mouse) predicted gene, 55229 (ENSMUSG00002076541.1) E-value: 1.7e+4 Identity: 67.27% Query coverage: 16.17% Gaps: 10.91% Alignment: Query 168 UGUGUAUGUAUGUGUGAGGGUUAU------CAGAUGCACAUUCGGAUAAAUGAAC 216 |||| |||| |||||| | || | || |||||||| | | |||| ||| Sbjct 17 UGUGCAUGUGUGUGUGUGUGUAAGUACACACACAUGCACAUACAUACAAAUAAAC 71 >> URS00023CDF64_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC001736) E-value: 1.7e+4 Identity: 50.55% Query coverage: 58.42% Gaps: 4.95% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | | Sbjct 6569 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAAUU 6656 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUC 266 | || ||||| | ||||| | | | |||| |||||| || || | || ||| | ||||| || Sbjct 6657 UU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGUAAUC 6740 Query 267 GUUAUU 272 ||| Sbjct 6741 UGAAUU 6746 >> URS0002379643_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC001736) E-value: 1.7e+4 Identity: 50.55% Query coverage: 58.42% Gaps: 4.95% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | | Sbjct 6596 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAAUU 6683 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUC 266 | || ||||| | ||||| | | | |||| |||||| || || | || ||| | ||||| || Sbjct 6684 UU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGUAAUC 6767 Query 267 GUUAUU 272 ||| Sbjct 6768 UGAAUU 6773 >> URS000234C559_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC001736) E-value: 1.7e+4 Identity: 50.55% Query coverage: 58.42% Gaps: 4.95% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | | Sbjct 6513 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAAUU 6600 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUC 266 | || ||||| | ||||| | | | |||| |||||| || || | || ||| | ||||| || Sbjct 6601 UU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGUAAUC 6684 Query 267 GUUAUU 272 ||| Sbjct 6685 UGAAUU 6690 >> URS00025F073E_9823 Sus scrofa (pig) lncRNA (ENSSSCG00000055874.1) E-value: 1.7e+4 Identity: 65.08% Query coverage: 20.79% Gaps: 6.35% Alignment: Query 121 GACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUG 183 |||| || | | || | |||| || | | || | | ||||||||| ||| |||||| Sbjct 3411 CACUCCACCACUGCACUCAACUGGGAAUGUGUCAAGA----GCGGUGUGUGUGUGUGUGUGUG 3469 >> URS00023DDC64_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC001736) E-value: 1.7e+4 Identity: 50.55% Query coverage: 58.42% Gaps: 4.95% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | | Sbjct 6561 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAAUU 6648 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUC 266 | || ||||| | ||||| | | | |||| |||||| || || | || ||| | ||||| || Sbjct 6649 UU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGUAAUC 6732 Query 267 GUUAUU 272 ||| Sbjct 6733 UGAAUU 6738 >> URS0002380436_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC001736) E-value: 1.7e+4 Identity: 50.55% Query coverage: 58.42% Gaps: 4.95% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | | Sbjct 6497 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAAUU 6584 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUC 266 | || ||||| | ||||| | | | |||| |||||| || || | || ||| | ||||| || Sbjct 6585 UU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGUAAUC 6668 Query 267 GUUAUU 272 ||| Sbjct 6669 UGAAUU 6674 >> URS00023A40F5_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC012676) E-value: 1.7e+4 Identity: 55.45% Query coverage: 33.33% Gaps: 6.93% Alignment: Query 86 UACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGU 172 || | || |||||| || | ||| || | | | | |||| | | | ||||| |||| | |||||| Sbjct 46531 GUCACAAUAACCAUAAAUGUUU----ACUAUCCCUGAAGGAAUUUUCGCACAAGAUCG---ACCCAUUAAAUUUUUGGAGGGUGUGU 46610 Query 173 AUGUAUGUGUGAGG 186 ||| |||||| | Sbjct 46611 GUGUGUGUGUGUGU 46624 >> URS000239C96E_3708 Brassica napus (rape) long non-coding RNA (BNAP_LNC006433) E-value: 1.7e+4 Identity: 74.42% Query coverage: 14.19% Gaps: 0.00% Alignment: Query 17 AGUCCUACACAAUCUUGAUGAAAACGAGUUCCAUGGGUUGCAA 59 ||| || || |||| | ||||||||||||||| || ||| Sbjct 5931 GGUCUUAAACCAUCUCGUUGAAAACGAGUUCCAACAAUUUCAA 5973 >> URS00027A0D4E_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.7e+4 Identity: 72.50% Query coverage: 12.87% Gaps: 2.50% Alignment: Query 155 AAACUUUG-AGGUGUGUGUAUGUAUGUGUGAGGGUUAUCA 193 ||| | || |||||||| ||| ||||||| | | ||| Sbjct 51454 AAAGUGUGUGUGUGUGUGUGUGUGUGUGUGACAGGUGUCA 51493 >> URS000240E619_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC001736) E-value: 1.7e+4 Identity: 50.55% Query coverage: 58.42% Gaps: 4.95% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | | Sbjct 6568 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAAUU 6655 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUC 266 | || ||||| | ||||| | | | |||| |||||| || || | || ||| | ||||| || Sbjct 6656 UU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGUAAUC 6739 Query 267 GUUAUU 272 ||| Sbjct 6740 UGAAUU 6745 >> URS00023C2346_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC001736) E-value: 1.7e+4 Identity: 50.55% Query coverage: 58.42% Gaps: 4.95% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | | Sbjct 6663 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAAUU 6750 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUC 266 | || ||||| | ||||| | | | |||| |||||| || || | || ||| | ||||| || Sbjct 6751 UU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGUAAUC 6834 Query 267 GUUAUU 272 ||| Sbjct 6835 UGAAUU 6840 >> URS00023990A6_85681 Citrus clementina (C. clementina) long non-coding RNA (CCLE_LNC001736) E-value: 1.7e+4 Identity: 50.55% Query coverage: 58.42% Gaps: 4.95% Alignment: Query 96 CCAUAAGACCUUUUAGAGAUGCCCAGACUCUA-----CUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAU 178 || | | || | || | || | | | | || | | | | || | || | |||||||| |||| | | | | Sbjct 6622 CCCCGUCAUCGUUGACUGAAGUCCGGUCACCGUUGACCGGCAGGGGCAAUUCGGUAAAUUCAUGAAACUUUGGGGUGAAUUUGUAAUU 6709 Query 179 GUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUGAUGUAGUC 266 | || ||||| | ||||| | | | |||| |||||| || || | || ||| | ||||| || Sbjct 6710 UU----AUGUAAUCAGUGGACAUUUCGGUAAUUUUAUGCCCUGAGGGUAAUUUCGUAAUUUCGGACAAUGUGAUUAAUUUAUGUAAUC 6793 Query 267 GUUAUU 272 ||| Sbjct 6794 UGAAUU 6799 >> URS0000A9E339_7897 Latimeria chalumnae (coelacanth) miRNA (ENSLACG00000021741.1) E-value: 1.7e+4 Identity: 68.97% Query coverage: 17.82% Gaps: 6.90% Alignment: Query 157 ACUUUGAG-GUGUGUGUAUGUAUGUGUGAGGGU---UAUCAGAUGCACAUUCGGAUAA 210 |||||| | |||||||| ||| |||||| | || ||| | || |||| | | | Sbjct 37 ACUUUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUAUUAUAUACACACACACACAC 94 >> URS000262488A_6573 Mizuhopecten yessoensis (Yesso scallop) uncharacterized LOC110462479 E-value: 1.7e+4 Identity: 57.30% Query coverage: 26.73% Gaps: 8.99% Alignment: Query 160 UUGAGGUGUGUGUAUGUAUG--UGUGAGGGUUAUCAGAUGC------ACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCC 240 | || ||||||||| | ||| |||||||| |||||| | | |||| || || |||||| ||| | | Sbjct 1263 AACAUGUAUGUGUAUGUGCGAUUGUAUCGGUUAUCAUUCCACUCGUAGCAUUCGAACACAUGACGUUUUGUUUGUAAGUCUUAUUUCCA 1351 >> URS00019984E2_59729 Taeniopygia guttata (zebra finch) lncRNA (ENSTGUG00000028657.1) E-value: 1.7e+4 Identity: 62.67% Query coverage: 24.42% Gaps: 2.67% Alignment: Query 49 AUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUU-UUAGAGAUGCCCAGA 122 ||||| | || ||| || || ||| ||||| ||||| |||| | | | | | ||||| || ||| Sbjct 2372 AUGGGCUUUAAUCCUACCAUUCUACAAUGCUGCUACUCACAUAGUAUCAAAAUGCCUUCAGUAGAG-UGGGUAGA 2445 >> URS0000A95A31_30611 Otolemur garnettii (small-eared galago) miRNA (ENSOGAG00000024959.1) E-value: 1.7e+4 Identity: 67.19% Query coverage: 20.79% Gaps: 1.56% Alignment: Query 101 AGACCUU-UUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGA 163 ||||||| ||| | |||| | |||| ||| | | ||||||| |||| ||| | | | | Sbjct 10 AGACCUUGUUAAAAAUGCAGAUUCUCUCCUGAGUUUCUAGAUUCUGCAUUUCUAACUAGCUCCA 73 >> URS0000ED249A_5661 Leishmania donovani gene:LdHU3.33.2310(CDS-product:RNA_recognition_mo tif._(a.k.a._RRM_RBD_or_RNP_domain)/RNA_recognition_motif_( a.k.a._RRM_RBD_or_RNP_domain)_putative) E-value: 1.7e+4 Identity: 60.23% Query coverage: 28.38% Gaps: 2.27% Alignment: Query 163 AGGUGUGUGUAUGUAUGUGUGAGGGUU-AUCAGAUGCACAUUCGGAU-AAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGU 247 ||||||||| ||| ||||+ | |+| + ||||| |||| | | || |||| |||| | +| | |||| | ||| |+ Sbjct 10292 UGGUGUGUGUGUGUGUGUGCAUGUGCUUGCAUGAUGCGCAUUGGUCUGCAAAGAACAGCUGAAUUCACUGUUAGCGUGCCGAGAAGC 10378 Query 248 G 248 | Sbjct 10379 G 10379 >> URS00026B186A_74358 Podarcis lilfordi non-coding RNA E-value: 1.7e+4 Identity: 61.82% Query coverage: 18.15% Gaps: 0.00% Alignment: Query 163 AGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU 217 ||||||||| ||| |||||| | || || | |||| | | | | || Sbjct 10 UGGUGUGUGUGUGUGUGUGUGUGUGUAGACACACACACACACACACACACACACG 64 >> URS0000A97D03_9940 Ovis aries (sheep) miRNA (ENSOARG00000024711.1) E-value: 1.7e+4 Identity: 66.00% Query coverage: 16.50% Gaps: 0.00% Alignment: Query 163 AGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 | |||||||| ||| |||||| | ||| || | |||| | | | | Sbjct 50 AUGUGUGUGUGUGUGUGUGUGUGUGUUUGCACACACACACACACACACAC 99 >> URS000242B8B8_4565 Triticum aestivum (bread wheat) long non-coding RNA (TAES_LNC007525) E-value: 1.7e+4 Identity: 70.21% Query coverage: 15.51% Gaps: 0.00% Alignment: Query 102 GACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAU 148 || ||| |||||||| |||| ||| | || ||| |||||| | Sbjct 85438 GAGUUUUGAGAGAUGCGAAGACACUAGUCUCGUCCUAAAUUGGGAAA 85484 >> URS0001967BEA_9823 Sus scrofa (pig) lncRNA (ENSSSCG00065006626.1) E-value: 1.7e+4 Identity: 48.45% Query coverage: 28.71% Gaps: 28.87% Alignment: Query 153 UAAAACUUUGAG-------GUGUGUGUAUGUAUGUGUGAG---GGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUC 231 ||||| | || | |||||||| ||| |||||| | | | | || ||| | || |||| | Sbjct 3620 UAAAAAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGAUGAGCAAAUGAAAAUGCGGACUCCC------------------C 3690 Query 232 UAGCCUUC 239 ||| | Sbjct 3691 AGGCCCUA 3698 >> URS000195C762_9823 Sus scrofa (pig) lncRNA (ENSSSCG00055011077.1) E-value: 1.7e+4 Identity: 48.45% Query coverage: 28.71% Gaps: 28.87% Alignment: Query 153 UAAAACUUUGAG-------GUGUGUGUAUGUAUGUGUGAG---GGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUC 231 ||||| | || | |||||||| ||| |||||| | | | | || ||| | || |||| | Sbjct 3620 UAAAAAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGAUGAGCAAAUGAAAAUGCGGACUCCC------------------C 3690 Query 232 UAGCCUUC 239 ||| | Sbjct 3691 AGGCCCUA 3698 >> URS000194B8C0_9823 Sus scrofa (pig) lncRNA (ENSSSCG00055018970.1) E-value: 1.7e+4 Identity: 60.00% Query coverage: 26.07% Gaps: 8.75% Alignment: Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUC-UAGCCUUCCGUCCUGUGACAUU 253 || || || || || | || || ||||||| | |||| | | |||| ||||| || |||| | ||| Sbjct 1843 CAAUUUGGGAAGGGGAU------CUCAAUCAGAUAAAUUACCUUCAAACUACAAUUUUCAGCCUGCCAUCCUUUAGCAUA 1916 >> URS00024181F5_3694 Populus trichocarpa (black cottonwood) long non-coding RNA (PTRI_LNC001190) E-value: 1.7e+4 Identity: 52.34% Query coverage: 42.24% Gaps: 10.16% Alignment: Query 170 UGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUGUGACAUUCUGUG 258 | ||| |||| | | || |||| | ||| ||| | | |||||| || ||||| ||| |||| | Sbjct 7472 GGAAUGAGUGUG---------UAACAUACACACCC----AAACACCCUUAAGUGUUUAAUUCCAGGCUUCCUUCCCGUGAAGGCUUCAA 7547 Query 259 AUGUAGUCGUUAUUCAGUGAUAUAAUGAAUCUCACCUAU 297 ||| ||| | | | ||| | | ||||||| Sbjct 7548 AUGGUGUCUUACCCUCCACAGCUGAUGUAACACACCUAU 7586 >> URS00027809DB_74358 Podarcis lilfordi non-coding RNA E-value: 1.7e+4 Identity: 66.67% Query coverage: 14.85% Gaps: 0.00% Alignment: Query 168 UGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 ||||| ||| |||||| | || || |+ ||||+ | |+|||| Sbjct 105 UGUGUGUGUGUGUGUGUGUGUGUGCACACACACACACACACAAAU 149 >> URS00023C591B_4146 Olea europaea (common olive) long non-coding RNA (OEUR_LNC015307) E-value: 1.7e+4 Identity: 62.34% Query coverage: 25.41% Gaps: 3.90% Alignment: Query 73 UAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUC 149 || ||| || | ||| | ||| | ||| ||| ||| | || ||| |||| || | | | || |||||| Sbjct 3093 AAACUUUUCUGUGUACUGAUGAUCUUUUGGACUUUUCAGAAAAGCUCAGCCUCUCCUUCAAAG---GCUUUGGCAUC 3166 >> URS0000C57E6E_246437 Tupaia chinensis (Chinese tree shrew) U4 spliceosomal RNA E-value: 1.7e+4 Identity: 56.84% Query coverage: 30.36% Gaps: 13.68% Alignment: Query 181 GUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUU---CCGUCCUGUGACAUUCUGUGAUGUAGUC 266 ||||| ||||| || || || | | | || |||| || | || | || | | ||||| || |||||||| Sbjct 30 AUGAGGUUUAUCUGAGGCGCAAUU----------AUUGCUAAUUGAAAACUUUUCCCUUUCCCCUGCCAUGACAACUUGCAAUGUAGUC 108 Query 267 GUUAUU 272 | ||| Sbjct 109 GGCAUU 114 >> URS00026E4B3F_74358 Podarcis lilfordi non-coding RNA E-value: 1.7e+4 Identity: 65.96% Query coverage: 15.51% Gaps: 0.00% Alignment: Query 167 GUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUG 213 |||||| ||| |||||| | || || | |||| | | |||| Sbjct 18 GUGUGUGUGUGUGUGUGUGUGUGUGCACACACACACACACACAAAUA 64 >> URS00027B3D93_74358 Podarcis lilfordi non-coding RNA E-value: 1.7e+4 Identity: 65.91% Query coverage: 14.52% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAU 208 |||||||| ||| |||||| | || || | |||| | | Sbjct 17 GUGUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACAC 60 >> URS00025895B8_61616 Pelobates cultripes (western spadefoot toad) non-coding RNA E-value: 1.7e+4 Identity: 69.23% Query coverage: 17.16% Gaps: 1.92% Alignment: Query 166 UGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACU 217 ||||||| ||| |||||| | |||| || ||||| | ||| |||| Sbjct 52 UGUGUGUGUGUGUGUGUGUGU-GUAUCUGACACACAUGCACAUAGUGGAACA 102 >> URS000275C940_6645 Octopus vulgaris (common octopus) non-coding RNA E-value: 1.7e+4 Identity: 52.17% Query coverage: 25.74% Gaps: 15.22% Alignment: Query 130 GCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUG--------------UAUGUGUGAGGGUUAUCAGAUGCACAU 202 |||||| +|| ||+ | || || | | | |||||||| || | |||||| | || || | | ||||+ Sbjct 35537 ACGGUGCACACGCGGUCACAUUUUGAAUCAUAUAUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUAAUUAUGUACACAC 35623 Query 203 UCGGA 207 | | Sbjct 35624 ACACA 35628 >> URS0000A78A82_9669 Mustela putorius furo (Domestic ferret) miRNA (ENSMPUG00000021082.1) E-value: 1.7e+4 Identity: 69.57% Query coverage: 15.18% Gaps: 2.17% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAA 210 |||||||| ||| |||||| |||| || || ||||+ | |+| Sbjct 26 GUGUGUGUGUGUGUGUGUGU-GGUUGGCAUAUACACACACACACAC 70 >> URS0000E8E48B_156563 Cyanistes caeruleus (blue tit) lncRNA (ENSCCEG00000009832.1) E-value: 1.7e+4 Identity: 53.95% Query coverage: 46.86% Gaps: 6.58% Alignment: Query 97 CAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGG----------CAUCUCUUAAAACUUUGAGGUGUGUGUAUG 175 |||||||| ||| ||| || | | || ||| | |||| | || ||| | | ||+| | |||| || Sbjct 382 CAUAAGACAAUUUGGAGUUGGGGAAUUUUACUUGAGGUAAUUUAUUGUGAACAAACAUGAAUUUCUGAUAGCUCUUUUGAGUGUUAAUA 470 Query 176 UAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUU 238 || || | | | ||| | |||+ | | |||||| |||||+ | |||| |||| Sbjct 471 AUAGUAAGAUGAUGAGCAGUUAGACACACACUUGCAUGAACAACUGAUCCUCCUUCUGGCCUG 533 >> URS000217B6B3_8019 Oncorhynchus kisutch (coho salmon) lncRNA (ENSOKIG00005005173.1) E-value: 1.7e+4 Identity: 59.60% Query coverage: 31.02% Gaps: 8.08% Alignment: Query 115 UGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGA-----UGCAC 200 ||| || ||||| ||| ||||| | || | ||| |||| || | ||||| | | | |||| | | | | || |||| Sbjct 101 UGCACA-ACUCUCCUGUAGUGCUUUGAGUGCAAUUACCUAACACUUGGAAGAGUGUG--AGAAGGAGUGAAGAUAACCCGAAAAGUUGCAU 188 Query 201 AUUCGGAU 208 | || || Sbjct 189 ACUCAGAC 196 >> URS00026C5B55_74358 Podarcis lilfordi non-coding RNA E-value: 1.7e+4 Identity: 65.12% Query coverage: 14.19% Gaps: 11.63% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 |||||||| ||| |||||| | || | | |||| | | Sbjct 24 GUGUGUGUGUGUGUGUGUGUGUGUGA-----UACACACACACA 61 >> URS00022AF9DE_9555 Papio anubis (olive baboon) lncRNA (ENSPANG00000051445.1) E-value: 1.7e+4 Identity: 59.68% Query coverage: 20.46% Gaps: 0.00% Alignment: Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUG 225 |||||||| | |||||||| | | || | ||| || | | ||| | || | | Sbjct 1623 UGUGUGUGUGUAUAUGUGUGUGUACAAACACACGCAUGCUCACACACAUGCAGAUCCAACAG 1684 >> URS0001961B20_9823 Sus scrofa (pig) lncRNA (ENSSSCG00035027344.1) E-value: 1.7e+4 Identity: 60.00% Query coverage: 26.07% Gaps: 8.75% Alignment: Query 175 GUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUC-UAGCCUUCCGUCCUGUGACAUU 253 || || || || || | || || ||||||| | |||| | | |||| ||||| || |||| | ||| Sbjct 1841 CAAUUUGGGAAGGGGAU------CUCAAUCAGAUAAAUUACCUUCAAACUACAAUUUUCAGCCUGCCAUCCUUUAGCAUA 1914 >> URS0002754FD0_74358 Podarcis lilfordi non-coding RNA E-value: 1.7e+4 Identity: 67.39% Query coverage: 15.18% Gaps: 0.00% Alignment: Query 167 GUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 |||||| ||| |||||| | || || |+ ||||+ | |+|||| Sbjct 84 GUGUGUGUGUGUGUGUGUGUGUGUGCACACACACACACACACAAAU 129 >> URS000277D576_74358 Podarcis lilfordi non-coding RNA E-value: 1.7e+4 Identity: 70.00% Query coverage: 13.20% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 |||||||| ||| |||||| | || || | |||| | Sbjct 14 GUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACAC 53 >> URS00009B3253_10090 Mus musculus long non-coding RNA NONMMUT000712.2 E-value: 1.8e+4 Identity: 63.08% Query coverage: 20.79% Gaps: 3.08% Alignment: Query 142 UGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG--GGUUAUCAGAUGCACAUUC 204 | || || || |||||+ ||||||||| ||| |||||| | || || | ||||| Sbjct 2146 UUAGCUUCAUAUAGAACUUCAUGGUGUGUGUGUGUGUGUGUGUGUGUGUGUGCACGUAUACAUUU 2210 >> URS00009B8868_10090 Mus musculus long non-coding RNA NONMMUT134215.1 E-value: 1.8e+4 Identity: 58.82% Query coverage: 27.72% Gaps: 11.76% Alignment: Query 102 GACCUUUUAGAGAUGCCCAGACUC-UACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 | |||| || |||||| ||| || || | | ||| ||| ||| | |||||||| ||| |||||| | Sbjct 1049 UUUCCUUUA-GGACGCCCAGCCUCACACAGCUGAUCCAGAG------GCUCCAAAAG--GGCAUGUGUGUGUGUGUGUGUGUGUG 1124 >> URS00023C66A5_3880 Medicago truncatula (barrel medic) long non-coding RNA (MTRU_LNC003621) E-value: 1.8e+4 Identity: 58.42% Query coverage: 33.33% Gaps: 6.93% Alignment: Query 158 CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUG 246 | ||||| ||| |||| ||| + + || | |||| |||| | | | |||||| || |||| | |||| |||||| Sbjct 3814 CGUUGAGUUGUAUGUAGAUAUACACAAGUGGAGUCAGUUGCAUAAGCAUAAAAAUGAUGUUAUGAUGA-------GGACUUCGGUCCUG 3895 Query 247 UGACAUUCUGUG 258 || +| ||| Sbjct 3896 GAACGCUUUGUC 3907 >> URS000276741D_74358 Podarcis lilfordi non-coding RNA E-value: 1.8e+4 Identity: 68.09% Query coverage: 15.51% Gaps: 0.00% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAA 211 |||||||| ||| |||||| | || || | |||| | ||| | Sbjct 8 GUGUGUGUGUGUGUGUGUGUGUGUACACACACACACACACACAUAUA 54 >> URS00027E6711_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015034137.1) E-value: 1.8e+4 Identity: 66.18% Query coverage: 22.44% Gaps: 7.35% Alignment: Query 156 AACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAU 223 | |||| ||||||||||| |||||||||| |||||| ||| | | ||| | | ||| Sbjct 3372 UAUUUUGGCCUGUGUGUAUGUCUGUGUGAGGGA-GUCAGAUUCACU----GGAACUUGAGUUACAGAU 3434 >> URS00027EF012_10029 Cricetulus griseus (Chinese hamster) lncRNA (ENSCGRG00015033696.1) E-value: 1.8e+4 Identity: 56.10% Query coverage: 27.06% Gaps: 8.54% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCCUG 246 |||||||| ||| |||||| | || || || | | | ||| | || | | || | | || ||||| Sbjct 15952 GUGUGUGUGUGUGUGUGUGCGCGUGCACACAUUCGUGCACACACAAAGGUACCACAG-------CACUGGACAUCAGUCCUA 16026 >> URS00019A4885_9995 Marmota monax (woodchuck) non-coding RNA E-value: 1.8e+4 Identity: 53.26% Query coverage: 26.73% Gaps: 17.39% Alignment: Query 161 UGAGGUGUGUGUAUGU----AUGUGUGAGG-------GUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCC 240 ||||||| |||| ||| |||||| | || ||| || ||| || |||||| | | | || | || | Sbjct 352 UGAGGUGCGUGUGUGUGUGUGUGUGUGUGUGUUAACCGUCAUCUUUUGAUCAUCAUGACCAAUGAAACAUUUACUACAAGU-----CUCCA 437 Query 241 G 241 | Sbjct 438 G 438 >> URS000195EC23_13616 Monodelphis domestica (gray short-tailed opossum) lncRNA (ENSMODG00000041120.1) E-value: 1.8e+4 Identity: 57.75% Query coverage: 23.43% Gaps: 0.00% Alignment: Query 41 CGAGUUCCAUGGGUUGCAAAAUUACUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAG 111 | ||||||| | | ||| ||| || | ||| |||||| || | | | | |||| | || Sbjct 934 UGGGUUCCAUUGAUCACAAUAUUUCUGUGCUUCAAUUUUCUCAUUUGUAAAAUGAAUUUAAGGGCCACUAA 1004 >> URS00023E2B88_3880 Medicago truncatula (barrel medic) long non-coding RNA (MTRU_LNC003618) E-value: 1.8e+4 Identity: 58.42% Query coverage: 33.33% Gaps: 6.93% Alignment: Query 158 CUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAUGAACUUCUGAUUGUAAUUCUAGCCUUCCGUCC 244 | ||||| ||| |||| ||| + + || | |||| |||| | | | |||||| || |||| | |||| |||| Sbjct 66450 CGUUGAGUUGUAUGUAGAUAUACACAAGUGGAGUCAGUUGCAUAAGCAUAAAAAUGAUGUUAUGAUGA-------GGACUUCGGUCC 66529 Query 245 UGUGACAUUCUGUG 258 || || +| ||| Sbjct 66530 UGGAACGCUUUGUC 66543 >> URS000283150C_356393 Limnoperna fortunei (Golden mussle) misc RNA ENSLFOG00000054570.1 E-value: 1.8e+4 Identity: 56.52% Query coverage: 37.95% Gaps: 0.00% Alignment: Query 65 CUAUCCUUUAAUUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUU 153 |||| |||| || ||||||| ||| || ||| | | | || | ||| | | | || | | || || | || Sbjct 633 AUAUCAUUUAUCUUAACUAUAUAUAUAGGGCGCAAAAGCCAUAGAUGUUAUAAACUGACACGAGUUCGAUUCCCGAGGUGGGACGGCUC 721 Query 154 AAAACUUUGAGGUGUGUGUAUGUAUG 179 |||| | | |||||||| ||| Sbjct 722 AAAAAUCAAAUCUGUGUGUACAGAUG 747 >> URS000261B968_210409 Portunus trituberculatus (Swimming crab) uncharacterized LOC123507953 E-value: 1.8e+4 Identity: 58.24% Query coverage: 28.05% Gaps: 6.59% Alignment: Query 103 ACCUUUUAGAGAU-GC-----CCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAG 185 || +||+|||| + || ||| | |||| || | | | | || || | || ||||||||||| ||| |||||| | Sbjct 51 ACACUUCAGAGGCAGCUCAAGCCAAUGACAGCUGCCAUGAAAAAAGGAGUAUUUCAUCAAGGAAAGAGGUGUGUGUGUGUGUGUGUGUG 139 Query 186 GG 187 | Sbjct 140 UG 141 >> URS0000CCE172_10116 Rattus norvegicus uncharacterized LOC103691087 E-value: 1.8e+4 Identity: 56.30% Query coverage: 39.27% Gaps: 9.24% Alignment: Query 76 UUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGA 163 | ||| | ||||| || |||| || || || | || || | |||| | | || | | | | | Sbjct 1400 AUAUGCAAAUUACAUCCUUUCCACAAAUCCCGAUAAA-AUCCCAA--------GGCGGGGUGUGUGUGUGUGUGUGUGU--GUGUGUG 1476 Query 164 GGUGUGUGUAUGUAUGUGUGAGGGUUAUCAG 194 |||||||| ||| |||||| | |||||||| Sbjct 1477 UGUGUGUGUGUGUGUGUGUGUGUGUUAUCAG 1507 >> URS000282FE49_50023 Panonychus citri (Citrus red mite) uncharacterized LOC128391145 E-value: 1.8e+4 Identity: 67.92% Query coverage: 17.49% Gaps: 0.00% Alignment: Query 152 UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUC 204 | |||| ||| |||||||| ||| |||||| |||| | || |||| Sbjct 740 AUCAAACAAUGAAGUGUGUGUGUGUUUGUGUGUUGGUUGGCUCAUCAUCAUUG 792 >> URS000277F94A_13765 Xyrichtys novacula (pearly razorfish) non-coding RNA E-value: 1.8e+4 Identity: 56.25% Query coverage: 26.40% Gaps: 17.71% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUU----AUCAGAUGCACA----UUCGGAUAAAUGAACUUCUGAUUGUA--------AUUCUAGCC 236 |||||||| ||| ||||||||||+| | |||| | | |+ | |+ | || || | | || | ||||| | | Sbjct 2335 GUGUGUGUGUGUGUGUGUGAGGGCUGCAGAACAGAACAA-AGAUUUCAGAACCACAGAGCUGCAGGAUGAAAGUCUGAGAUUCUGGAC 2421 Query 237 UUCCGUCC 244 |||| + | Sbjct 2422 UUCCACUC 2429 >> URS0000ED971F_5661 Leishmania donovani gene:LdHU3.20.0640(CDS-product:zeta_tubulin_putat ive) E-value: 1.8e+4 Identity: 59.78% Query coverage: 28.38% Gaps: 7.61% Alignment: Query 116 GCCCAGACUCUACUGCGGUGCUAGAUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGU------UAUCAGAUGC 198 | ||| | | ||||| || ||| | || |||| | | ||||||| || ||| |||||| | || || ||||| Sbjct 2181 ACUCAGCCGCAGCUGCGCAGCAAGAACGCCGAUGUCUUUGCCC-UCCAGGUGUGCGUGUGUGUGUGUGUGUGUGUGCUGUAAGUGAUGC 2268 Query 199 ACA 201 || Sbjct 2269 UCA 2271 >> URS00023B4EE4_3218 Physcomitrium patens (P. patens) long non-coding RNA (PPAT_LNC010521) E-value: 1.8e+4 Identity: 52.11% Query coverage: 60.73% Gaps: 4.74% Alignment: Query 35 UGAAAACGAGUUCCAUGG-GUUGCAAAAUUACUAUCCUUUAA-UUUUGCUAUAUACAUACUAUCCAUAAGACCUUUUAGAGAUGCCC 119 ||| | || ||| || | ||||| | ||| | | | || | | | | | | || |||| ||| | | Sbjct 49890 GGAAGAAGAAUUCUGUGCUGGAGCAAACCGAUCCUCCAUCUAUUCCUGUGAAGGAUCUGUUUCCUUCAGGAGAUUUUCCAGAGGGCG 49976 Query 120 AGACUCUACUGCGGUGCUAG----AUUGGGCAUCUCUUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAU 202 | | | || || | || | || | ||||| || | |||||||| ||| | ||| | | | || | Sbjct 49977 AAAUC---CAGCAGUACAAGGAUGAGUGAGUAUCUCGAUCUUCUGUUGGGUGUGUGCAUGACUUAUUGACUGCUUUUGUAUUAGAAA 50060 Query 203 UCGGAUAAAUGAACUU 218 | | ||||||||| || Sbjct 50061 UGGAAUAAAUGAAAUU 50076 >> URS000199D552_59729 Taeniopygia guttata (zebra finch) lncRNA (ENSTGUG00000021314.1) E-value: 1.8e+4 Identity: 67.86% Query coverage: 18.48% Gaps: 1.79% Alignment: Query 152 UUAAAACUUUGAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGA 207 ||||| ||||||||| || ||| |||||| || || | |||||||| Sbjct 2479 AUAAAAAGUUGAGGUGUAUGC-UGUGUGUGUGGUGGAUAACCAGUGCACAUUGCCC 2533 >> URS00027872C7_74358 Podarcis lilfordi non-coding RNA E-value: 1.8e+4 Identity: 64.71% Query coverage: 16.83% Gaps: 0.00% Alignment: Query 162 GAGGUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 | ||||||||| ||| |||||| | || || | |||| | | | | Sbjct 6 GGGGUGUGUGUGUGUGUGUGUGUGUGUGCGCACACACACACACACACACAC 56 >> URS00025B25D7_61616 Pelobates cultripes (western spadefoot toad) non-coding RNA E-value: 1.8e+4 Identity: 61.82% Query coverage: 17.49% Gaps: 3.64% Alignment: Query 165 GUGUGUGUAUGUAUGUGUGAGGGUUAUCAGAUGCACAUUCG--GAUAAAUGAACU 217 |||||||| ||| |||||| | || || |+ ||||+ | |+| |+ ||| Sbjct 25 GUGUGUGUGUGUGUGUGUGUGUGUAUACAUACACACACACACACACACACACACU 79 >> URS000241A24A_57918 Fragaria vesca (wild strawberry) long non-coding RNA (FVES_LNC001309) E-value: 1.9e+4 Identity: 81.08% Query coverage: 12.21% Gaps: 0.00% Alignment: Query 176 UAUGUGUGAGGGUUAUCAGAUGCACAUUCGGAUAAAU 212 ||||||||| ||| |||| | || |||||||||| | Sbjct 15909 UAUGUGUGAAAGUUCUCAGUUUCAAAUUCGGAUAAUU 15945