{"text_format":"3","workbook":"xlsx","n_sheets":5,"sheets":["Group definition","GroupAB-allGenes","upregulated genes","downregulated genes","Gene family analysis"],"read":"whole","date_system":"1900"}

{"sheet":"Group definition","index":0,"n_rows":3,"n_cols":7,"rows_kept":3,"merged":[[0,5,0,6]]}
[null,"Category","# of samples","PCR test","Antibody test","exception"]
["Group A","Seropositive, asymptomatic",41,"negative","positive","1 Cystic fibrosis","1 NEMO deficiency"]
["Group B","Seronegative, highly exposed",52,"negative","negative"]

{"sheet":"GroupAB-allGenes","index":1,"n_rows":19352,"n_cols":99,"rows_kept":562,"cut":true,"bounds":{"rows_first":250,"rows_last":62,"rows_between":250,"halvings":3}}
["Supplementary Table 4. List of all genes with normalized read counts and statistics in each RNA-seq from patients of Group A and B"]
[]
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{"sheet":"upregulated genes","index":2,"n_rows":14,"n_cols":6,"rows_kept":14}
["List of upregulated genes (cutoff <5 value and <1 of log2FoldChange)"]
[]
["Gene","log2FoldChange","pvalue","padj","GroupA_mean","GroupB_mean"]
["ADGRG7",{"v":7.14874221480245,"d":"7.15"},{"v":9.83110373236082e-08,"d":"0.00"},{"v":2.69401809495957e-06,"d":"0.00"},{"v":53.8633123060497,"d":"53.86"},{"v":0.44036718693998,"d":"0.44"}]
["HBG1",{"v":1.71061825161589,"d":"1.71"},{"v":0.000477923827675986,"d":"0.00"},{"v":3.8434271455161E-3,"d":"0.00"},{"v":47.8376202789703,"d":"47.84"},{"v":33.143727133353,"d":"33.14"}]
["LOC100134317",{"v":1.70311132743081,"d":"1.70"},{"v":1.98880548767423E-5,"d":"0.00"},{"v":0.00027127247306802,"d":"0.00"},{"v":27.0832662332143,"d":"27.08"},{"v":4.74874049215163,"d":"4.75"}]
["TACSTD2",{"v":1.48888438093356,"d":"1.49"},{"v":1.02760391423938e-09,"d":"0.00"},{"v":4.50144858874622e-08,"d":"0.00"},{"v":67.5813256167267,"d":"67.58"},{"v":28.3432163168373,"d":"28.34"}]
["LOC284412",{"v":1.44500926720244,"d":"1.45"},{"v":8.95639474235185E-5,"d":"0.00"},{"v":0.000951121103670616,"d":"0.00"},{"v":26.4523058832633,"d":"26.45"},{"v":5.93928271267477,"d":"5.94"}]
["TBC1D3P1-DHX40P1",{"v":1.42899298205162,"d":"1.43"},{"v":2.08243764511545e-05,"d":"0.00"},{"v":0.000282143205999546,"d":"0.00"},{"v":16.629470895805,"d":"16.63"},{"v":6.26482137903386,"d":"6.26"}]
["ZNF300P1",{"v":1.37571709981496,"d":"1.38"},{"v":3.56942073392684e-05,"d":"0.00"},{"v":0.000450298725943491,"d":"0.00"},{"v":13.4179305857252,"d":"13.42"},{"v":4.70832884018119,"d":"4.71"}]
["PAGE5",{"v":1.36486425835171,"d":"1.36"},{"v":3.90015148550674e-05,"d":"0.00"},{"v":0.000483486125989043,"d":"0.00"},{"v":5.92316441811118,"d":"5.92"},{"v":2.34305617720608,"d":"2.34"}]
["CCL4L2",{"v":1.24561483563809,"d":"1.25"},{"v":3.63233971196634e-05,"d":"0.00"},{"v":4.56497424628708E-4,"d":"0.00"},{"v":28.3116964964586,"d":"28.31"},{"v":11.8587893950007,"d":"11.86"}]
["NKX3-1",{"v":1.21736316134845,"d":"1.22"},{"v":7.09145523206041e-06,"d":"0.00"},{"v":1.11145375284803E-4,"d":"0.00"},{"v":776.606586657814,"d":"776.61"},{"v":351.943583619679,"d":"351.94"}]
["ZNF214",{"v":1.07355191884967,"d":"1.07"},{"v":0.0034690145670277,"d":"0.00"},{"v":0.0189951479732409,"d":"0.02"},{"v":5.15566997300214,"d":"5.16"},{"v":2.52130617473309,"d":"2.52"}]

{"sheet":"downregulated genes","index":3,"n_rows":10,"n_cols":6,"rows_kept":10}
["List of downregulated genes (cutoff <5 value and <1 of log2FoldChange)"]
[]
["Gene","log2FoldChange","pvalue","padj","GroupA_mean","GroupB_mean"]
["FST",{"v":-2.30780723906832,"d":"(2.31)"},{"v":1.68454028587881e-06,"d":"0.00"},{"v":3.25528925021946e-05,"d":"0.00"},{"v":20.3329794535919,"d":"20.33"},{"v":58.4714996784657,"d":"58.47"}]
["MSLN",{"v":-2.18677313068401,"d":"(2.19)"},{"v":0.000250332212652175,"d":"0.00"},{"v":0.00224620639416299,"d":"0.00"},{"v":0.733667605661489,"d":"0.73"},{"v":8.8329367483056,"d":"8.83"}]
["SNAP91",{"v":-2.05828728015106,"d":"(2.06)"},{"v":1.30828082974121E-3,"d":"0.00"},{"v":0.00871055957631498,"d":"0.01"},{"v":2.917726636582,"d":"2.92"},{"v":11.9452065658256,"d":"11.95"}]
["MLXIPL",{"v":-2.00806144011092,"d":"(2.01)"},{"v":8.39910342108439e-08,"d":"0.00"},{"v":2.34390293479971E-6,"d":"0.00"},{"v":1.64673200690521,"d":"1.65"},{"v":7.06194037325499,"d":"7.06"}]
["RNU86",{"v":-1.11553780969753,"d":"(1.12)"},{"v":4.0873366576946e-08,"d":"0.00"},{"v":1.23726803842473e-06,"d":"0.00"},{"v":4.64225623893223,"d":"4.64"},{"v":10.7861339519567,"d":"10.79"}]
["CASC8",{"v":-1.01633566511941,"d":"(1.02)"},{"v":1.28937679546447E-4,"d":"0.00"},{"v":1.29599080770817E-3,"d":"0.00"},{"v":53.9929655393227,"d":"53.99"},{"v":111.34216915074,"d":"111.34"}]
["ESPNP",{"v":-1.01355068495638,"d":"(1.01)"},{"v":0.00325179004134589,"d":"0.00"},{"v":0.0180387731882637,"d":"0.02"},{"v":2.44545132452961,"d":"2.45"},{"v":5.0407446607696,"d":"5.04"}]

{"sheet":"Gene family analysis","index":4,"n_rows":6,"n_cols":6,"rows_kept":6}
["Gene family analysis of regulated genes"]
[]
[null,"cytokines and growth factors","transcription factors","homeodomain proteins","cell differentiation markers","protein kinases"]
["Genes","CCL4L2","MLXIPL","NKX3-1"]
[null,null,"NKX3-1"]
[null,null,"ZNF214"]