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["Supplementary Table 1. Gene lists of published signatures."]
[]
["Signatures","NK activation ligand","Liver epithelial cell phenotype","HCC stemness","NK score","NK cell phenotype",null,null,"CD8+ T cell phenotype"]
["Reference","Nicholas D. et al., 2022 Nat Rev Cancer (PMID: 32581320)","Xue et al., 2022 Nature (PMID:36352227)","Kouki et al., 2017 Mol Cancer (PMID: 28137313)","Xue et al., 2022 Nature (PMID:36352227)","Xue et al., 2022 Nature (PMID:36352227)",null,null,"Chu et al., 2023 Nat Med (PMID:37248301)"]
["Gene Lists","MICA","ADH4","CD24","PLCG2","NK_01_FCGR3A_CX3CR1","NK_02_FCGR3A_CXCR4","NK_03_FCGR3A_IFNG","Exhaustion","Activation Effector function","TCR Signaling"]
[null,"MICB","AFM","PROM1","GZMA","FGFBP2","GZMB","IFNG","PDCD1","FAS","CALM1"]
[null,"ULBP1","AHSG","EPCAM","GNLY","GZMB","FGFBP2","FGFBP2","LAYN","FASLG","CALM2"]
[null,"ULBP2","AMBP","CD44","FGFBP2","GNLY","GNLY","GNLY","HAVCR2","CD44","CALM3"]
[null,"ULBP3","C4BPB","THY1","GZMB","NKG7","NKG7","NKG7","LAG3","CD69","CAST"]
[null,"RAET1E","C6","ICAM1","NKG7","PRF1","PRF1","GZMB","CD244","CD38","CD247"]
[null,"RAET1G","CYP2E1","CD47","PRF1","SPON2","SPON2","SPON2","CTLA4","NKG7","CD3D"]
[null,"RAET1L","CYP4F2","LGR5","IFNG","KLRD1","KLRD1","KLRD1","LILRB1","KLRB1","CD3E"]
[null,"NCR3LG1","F9",null,"SPON2","MYOM2","CST7","PRF1","TIGIT","KLRD1","CD3G"]
[null,"BAG6","FGA",null,"KLRC1","GZMH","GZMH","CD69","TOX","KLRF1","CSK"]
[null,"PVR","FGB",null,null,"CLIC3","KLRF1","KLRF1","VSIR","KLRG1","DOK1"]
[null,"ICAM1","FGG",null,null,"CTSW","CD247","DNAJB1","BTLA","KLRK1","DOK2"]
[null,"HHLA2","GC",null,null,"KLRF1","MYOM2","CD247","ENTPD1","FCGR3A","FYN"]
[null,"CD58","HPX",null,null,"CST7","CLIC3","CST7","CD160","CX3CR1","LCK"]
[null,"NECTIN2","PROC",null,null,"CD247","CTSW","HSPA1A","LAIR1","CD300A","NFATC2"]
[null,"HLA-E","SAA4",null,null,"HOPX","KLRB1","GZMH",null,"FGFBP2","NFATC1"]
[null,"HLA-DPB1","SERPINA6",null,null,"CX3CR1","GZMM","CLIC3",null,"ID2","NFATC4"]
[null,null,"SERPINC1",null,null,"GZMM","PLAC8","CTSW",null,"ID3","NFATC3"]
[null,null,"SERPIND1",null,null,"PLAC8","FCGR3A","MYOM2",null,"PRDM1","PLEK"]
[{"$nulls":5},"ABHD17A","CCL5","BPGM",null,"RUNX3","PAG1"]
[{"$nulls":5},"CCL5","S1PR5","CCL5",null,"TBX21","PTPN11"]
[{"$nulls":5},"GZMA","TRDC","PLAC8",null,"ZEB2","PTPN2"]
[{"$nulls":5},"FCGR3A","GZMA","FCGR3A",null,"BATF","PTPN22"]
[{"$nulls":5},"TRDC","HOPX","KLRB1",null,"IRF4","PTPN4"]
[{"$nulls":5},"TXNIP","DTHD1","HOPX",null,"NR4A1","PTPN6"]
[{"$nulls":5},"CEP78","CD7","GZMM",null,"NR4A2","PTPN7"]
[{"$nulls":5},"SAMD3","CCL4","PYHIN1",null,"NR4A3","PTPRC"]
[{"$nulls":5},"HCST","SYTL3","HSP90AA1",null,"PBX3","PTPRCAP"]
[{"$nulls":5},"PYHIN1","TXK","CACYBP",null,"ZNF683","S100A10"]
[{"$nulls":5},"KLRB1","ARL4C","CCL4",null,"HOPX","S100A11"]
[{"$nulls":5},"CMC1","EFHD2","HSPA6",null,"FOS","S100A13"]
[{"$nulls":5},"BIN2","MATK","HSPA1B",null,"FOSB","S100A4"]
[{"$nulls":5},"TXK","ADGRG1","HSPH1",null,"JUN","S100A6"]
[{"$nulls":5},"S1PR5","PYHIN1","HSPE1",null,"JUNB","ZAP70"]
[{"$nulls":5},"PRMT2","LAIR2","HSPA8",null,"JUND","DUSP1"]
[{"$nulls":5},"LAIR2","ABHD17A","DOK2",null,"STAT1","DUSP2"]
[{"$nulls":5},"IFITM1","SH2D2A","HSPD1",null,"STAT2","DUSP4"]
[{"$nulls":5},"ADGRG1","CX3CR1","KLF2",null,"STAT5A","DUSP5"]
[{"$nulls":5},"PTGDR","HCST","DNAJA1",null,"STAT6","DUSP10"]
[{"$nulls":5},"TRAF3IP3","ZEB2","JUN",null,"STAT4","LAT"]
[{"$nulls":5},"GIMAP7","ANXA1","SLC5A3",null,"EOMES","PLCG1"]
[{"$nulls":5},"RAP1B","AKNA","DUSP2",null,null,"PLCG2"]
[{"$nulls":5},"CD7","CMC1","PMAIP1",null,null,"PPP3CA"]
[{"$nulls":5},"EFHD2","GNG2","ANXA1",null,null,"PPP3CC"]
[{"$nulls":5},"ITGB2","APOA2","PPP1R15A",null,null,"FOS"]
[{"$nulls":5},"TTC38","RUNX3","PTGDS",null,null,"FOSB"]
[{"$nulls":5},"CCND3","ALB","CMC1",null,null,"FOSL1"]
[{"$nulls":5},"MBP","APOC3","ZFAND2A",null,null,"FOSL2"]
[{"$nulls":5},"C12orf75","APOA1","CHORDC1",null,null,"JUN"]
[{"$nulls":5},"PLCG2","METRNL","MRPL18",null,null,"JUNB"]
[{"$nulls":5},"PTGDS","PTGDS","NEU1",null,null,"JUND"]
[{"$nulls":10},"NR4A1"]
[{"$nulls":10},"NR4A2"]
[{"$nulls":10},"NR4A3"]
[{"$nulls":10},"BATF"]
[{"$nulls":10},"IRF4"]
[{"$nulls":10},"SH2D2A"]