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["Table S4 156 potential candidate genes within 100 Kb of flanking significant markers"]
[]
["Chr.","Gene","Gene expression","Trait","Annotation"]
["A05","GH_A05G3644",null,"RSDW16","Cytochrome c oxidase subunit 6b-2"]
["A05","GH_A05G3645",null,"RSDW16","Transposon Ty3-G Gag-Pol polyprotein"]
["A05","GH_A05G3646",null,"RSDW16","Tetratricopeptide repeat protein 1 "]
["A05","GH_A05G3647",null,"RSDW16","Putative clathrin assembly protein"]
["A07","GH_A07G2207",null,"RSFW16, RSFW17","no"]
["A07","GH_A07G2208","Up-regulated in Miscot7913-83","RSFW16, RSFW17","Subtilisin-like protease SBT5.3 "]
["A07","GH_A07G2209",null,"RSFW16, RSFW17","Ras-related protein RABB1c "]
["A07","GH_A07G2210",null,"RSFW16, RSFW17","Glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic "]
["A07","GH_A07G2211",null,"RSFW16, RSFW17","no"]
["A07","GH_A07G2212",null,"RSFW16, RSFW17","no"]
["A07","GH_A07G2213",null,"RSFW16, RSFW17","Myb family transcription factor APL "]
["A07","GH_A07G2214",null,"RSFW16, RSFW17","Transmembrane 9 superfamily member 12 "]
["A07","GH_A07G2215",null,"RSFW16, RSFW17","no"]
["A07","GH_A07G2216",null,"RSFW16, RSFW17,  RPH17","Auxilin-related protein 1 "]
["A07","GH_A07G2217",null,"RSFW16, RSFW17,  RPH17","60S ribosomal protein L5 "]
["A07","GH_A07G2218",null,"RSFW16, RSFW17,  RPH17","Ribonuclease 2 "]
["A07","GH_A07G2219",null,"RSFW16, RSFW17,  RPH17","Mediator of RNA polymerase II transcription subunit 19a "]
["A07","GH_A07G2220",null,"RSFW16, RSFW17,  RPH17","Acyl-coenzyme A thioesterase 9, mitochondrial "]
["A07","GH_A07G2221",null,"RSFW16, RSFW17,  RPH17","UDP-glycosyltransferase 74F2 "]
["A07","GH_A07G2222",null,"RSFW16, RSFW17,  RPH17","Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 "]
["A07","GH_A07G2223",null,"RSFW16, RSFW17,  RPH17","FRIGIDA-like protein 3 "]
["A07","GH_A07G2224",null,"RSFW16, RSFW17,  RPH17","Ubiquitin-like-conjugating enzyme ATG10 "]
["A07","GH_A07G2225",null,"RSFW16, RSFW17,  RPH17","Glutamate receptor 2.7 "]
["A07","GH_A07G2226",null,"RSFW16, RSFW17,  RPH17","Glutamate receptor 1.3 "]
["A07","GH_A07G2227",null,"RSFW16, RSFW17,  RPH17","no"]
["A07","GH_A07G2228",null,"RSFW16, RSFW17,  RPH17","Protein FAR1-RELATED SEQUENCE 5 "]
["A07","GH_A07G2229",null,"RSFW16, RSFW17,  RPH17","Calmodulin-like protein 7 "]
["A07","GH_A07G2230",null,"RSFW16, RSFW17,  RPH17","Probable linoleate 9S-lipoxygenase 4 "]
["A07","GH_A07G2231",null,"RSFW16, RSFW17,  RPH17","Uncharacterized protein "]
["A07","GH_A07G2232",null,"RSFW16, RSFW17,  RPH17","Probable sodium/metabolite cotransporter BASS3, chloroplastic "]
["A07","GH_A07G2233","Down-regulated  in Miscot7913-83","RSFW16, RSFW17,  RPH17","no"]
["A08","GH_A08G0481",null,"RSFW16, RSDW16","Zinc finger CCCH domain-containing protein 32 "]
["A08","GH_A08G0482",null,"RSFW16, RSDW16","no"]
["A08","GH_A08G0483",null,"RSFW16, RSDW16","Protein TRANSPORT INHIBITOR RESPONSE 1 "]
["A08","GH_A08G0484",null,"RSFW16, RSDW16","U1 small nuclear ribonucleoprotein C "]
["A08","GH_A08G0485",null,"RSFW16, RSDW16","no"]
["A08","GH_A08G0486",null,"RSFW16, RSDW16","no"]
["A08","GH_A08G0487",null,"RSFW16, RSDW16","no"]
["A08","GH_A08G0488","Up-regulated  in Miscot7913-83","RSFW16, RSDW16","LRR receptor-like serine/threonine-protein kinase GSO2 "]
["A08","GH_A08G0489",null,"RSFW16, RSDW16","Mitochondrial substrate carrier family protein ucpB "]
["A08","GH_A08G0490",null,"RSDW16","Histone H2AX "]
["A08","GH_A08G0491",null,"RSDW16","Serine/threonine-protein phosphatase BSL1 "]
["A08","GH_A08G0492",null,"RSDW16","Mitochondrial ubiquitin ligase activator of NFKB 1 "]
["A08","GH_A08G0493",null,"RSDW16","Cyclin-B1-2 "]
["A08","GH_A08G0494","Down-regulated  in Miscot7913-83","RSDW16","no"]
["A08","GH_A08G0495",null,"RSDW16","BTB/POZ and MATH domain-containing protein 2 "]
["A08","GH_A08G0496",null,"RSDW16","Mediator of RNA polymerase II transcription subunit 33B "]
["A08","GH_A08G0532",null,"RSDW16, RSDW17","Putative G3BP-like protein "]
["A08","GH_A08G0533",null,"RSDW16, RSDW17","40S ribosomal protein S14 "]
["A08","GH_A08G0534",null,"RSDW16, RSDW17","40S ribosomal protein S8 "]
["A08","GH_A08G0535",null,"RSDW16, RSDW17","Linoleate 9S-lipoxygenase 5, chloroplastic "]
["A08","GH_A08G0536",null,"RSDW16, RSDW17","Probable sodium/metabolite cotransporter BASS3, chloroplastic "]
["A08","GH_A08G0537",null,"RSDW16, RSDW17","40S ribosomal protein S8 "]
["A08","GH_A08G0538",null,"RSDW16, RSDW17","Probable sodium/metabolite cotransporter BASS3, chloroplastic"]
["A08","GH_A08G0539",null,"RSDW16, RSDW17","Linoleate 9S-lipoxygenase 5, chloroplastic"]
["A08","GH_A08G0540",null,"RSDW16, RSDW17","Probable sodium/metabolite cotransporter BASS3, chloroplastic "]
["A08","GH_A08G0541",null,"RSDW16, RSDW17","Linoleate 9S-lipoxygenase 5, chloroplastic "]
["A08","GH_A08G0542",null,"RSDW16, RSDW17","Rhodanese-like domain-containing protein 4A, chloroplastic "]
["A08","GH_A08G0543",null,"RSDW16, RSDW17","Mediator of RNA polymerase II transcription subunit 19a "]
["A08","GH_A08G0544","Up-regulated  in Miscot7913-83","RSDW16, RSDW17","60S ribosomal protein L5 "]
["A08","GH_A08G0545",null,"RSDW16, RSDW17","no"]
["A08","GH_A08G0546",null,"RSDW16, RSDW17","Flowering time control protein FPA "]
["A08","GH_A08G0547",null,"RSDW16, RSDW17","no"]
["A08","GH_A08G0999",null,"RSFW17","3-hydroxyisobutyryl-CoA hydrolase 1 "]
["A08","GH_A08G1000",null,"RSFW17","DAR GTPase 2, mitochondrial "]
["A08","GH_A08G1001",null,"RSFW17","no"]
["A09","GH_A09G1052",null,"RPH17","Protein argonaute 5 "]
["A09","GH_A09G1053",null,"RPH17","Aspartic proteinase-like protein 2 "]
["A09","GH_A09G1054",null,"RPH17","Lysosomal Pro-X carboxypeptidase "]
["A10","GH_A10G1617",null,"RPH16, RSFW16","U-box domain-containing protein 16 "]
["A10","GH_A10G1618",null,"RPH16, RSFW16","ovate family protein 2"]
["A10","GH_A10G1619",null,"RPH16, RSFW16","no"]
["A10","GH_A10G1620","Up-regulated  in Miscot7913-83","RPH16, RSFW16","Probable serine/threonine-protein kinase WNK5"]
["A10","GH_A10G1621",null,"RPH16, RSFW16","no"]
["A11","GH_A11G3458",null,"RSFW17","Protein EXORDIUM-like 6 "]
["A11","GH_A11G3459",null,"RSFW17","no"]
["A11","GH_A11G3460",null,"RSFW17","FAS1 domain-containing protein SELMODRAFT_448915 "]
["A11","GH_A11G3461",null,"RSFW17","ADP-ribosylation factor "]
["A11","GH_A11G3462",null,"RSFW17","CLAVATA3/ESR (CLE)-related protein 1"]
["A11","GH_A11G3463",null,"RSFW17","no"]
["A11","GH_A11G3464",null,"RSFW17","CLAVATA3/ESR (CLE)-related protein 1"]
["A11","GH_A11G3465","Up-regulated  in Miscot7913-83","RSFW17","Beta-amylase "]
["A11","GH_A11G3466",null,"RSFW17","no"]
["A11","GH_A11G3467",null,"RSFW17","no"]
["A11","GH_A11G3468",null,"RSFW17","no"]
["A11","GH_A11G3469",null,"RSFW17","no"]
["A11","GH_A11G3470",null,"RSFW17","Serine/threonine-protein kinase At3g07070 "]
["A11","GH_A11G3471",null,"RSFW17","CBS domain-containing protein CBSX6 "]
["A11","GH_A11G3472",null,"RSFW17","Beta-glucosidase 42 "]
["A11","GH_A11G3473",null,"RSFW17","Putative ribonuclease H protein At1g65750 "]
["A11","GH_A11G3474",null,"RSFW17","Acyl-CoA-binding protein "]
["A11","GH_A11G3475",null,"RSFW17","Acyl-CoA-binding protein "]
["A11","GH_A11G3476",null,"RSFW17","Plastid division protein CDP1, chloroplastic"]
["A11","GH_A11G3477",null,"RSFW17","GDT1-like protein 3 "]
["A11","GH_A11G3478",null,"RSFW17","3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic"]
["A12","GH_A12G1086",null,"RPH17","no"]
["A13","GH_A13G0159",null,"RPH16, RPH17","B3 domain-containing transcription factor NGA4 "]
["A13","GH_A13G0160",null,"RPH16, RPH17","GDSL esterase/lipase CPRD49 "]
["A13","GH_A13G0161",null,"RPH16, RPH17","no"]
["A13","GH_A13G0162","Down-regulated  in Miscot7913-83","RPH16, RPH17","Pyruvate decarboxylase 2"]
["A13","GH_A13G0163",null,"RPH16, RPH17","High mobility group B protein 1 "]
["A13","GH_A13G0164",null,"RPH16, RPH17","Protein yippee-like "]
["A13","GH_A13G0165",null,"RPH16, RPH17","Auxin transporter-like protein 2 "]
["A13","GH_A13G0166",null,"RPH16, RPH17","60S acidic ribosomal protein P0-1 "]
["A13","GH_A13G0167",null,"RPH16, RPH17","NAD(P)H-quinone oxidoreductase subunit N, chloroplastic "]
["A13","GH_A13G0168","Up-regulated  in Miscot7913-83","RPH16, RPH17","Nematode resistance protein-like HSPRO2 "]
["A13","GH_A13G0169",null,"RPH16, RPH17","Cytochrome P450 714C2 "]
["A13","GH_A13G0170",null,"RPH16, RPH17","Cytochrome P450 714A1 "]
["A13","GH_A13G0171","Up-regulated  in Miscot7913-83","RPH16, RPH17","Probable aquaporin PIP-type 7a "]
["A13","GH_A13G0172",null,"RPH16, RPH17","Eukaryotic translation initiation factor 3 subunit F"]
["A13","GH_A13G0173",null,"RPH16, RPH17","no"]
["A13","GH_A13G0174",null,"RPH16, RPH17","Probable signal peptidase complex subunit 2 "]
["A13","GH_A13G0175",null,"RPH16, RPH17","Glucan endo-1,3-beta-glucosidase 2 "]
["A13","GH_A13G0176",null,"RPH16, RPH17","LIM domain-containing protein WLIM2b "]
["A13","GH_A13G0177",null,"RPH16, RPH17","Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1"]
["A13","GH_A13G0178",null,"RPH16, RPH17","Uncharacterized protein "]
["A13","GH_A13G0179",null,"RPH16, RPH17","Immediate early response 3-interacting protein 1 "]
["A13","GH_A13G0180",null,"RPH16, RPH17","L-type lectin-domain containing receptor kinase VIII.2 "]
["A13","GH_A13G0181",null,"RPH16, RPH17","Putative ribonuclease H protein At1g65750 "]
["A13","GH_A13G0182",null,"RPH16, RPH17","no"]
["A13","GH_A13G0183",null,"RPH16, RPH17","Protein GUCD1 "]
["A13","GH_A13G0184",null,"RPH16, RPH17","2-alkenal reductase (NADP(+)-dependent) "]
["A13","GH_A13G0977",null,"RSDW16, RSDW17","Auxin-responsive protein SAUR21 "]
["A13","GH_A13G0978",null,"RSDW16, RSDW17","Indole-3-acetic acid-induced protein ARG7 "]
["A13","GH_A13G0979",null,"RSDW16, RSDW17","Auxin-responsive protein SAUR23"]
["A13","GH_A13G0980",null,"RSDW16, RSDW17","Auxin-induced protein X15 "]
["D02","GH_D02G1278",null,"RPH17","50S ribosomal protein L14, chloroplastic"]
["D02","GH_D02G1279",null,"RPH17","30S ribosomal protein S3, chloroplastic "]
["D02","GH_D02G1280",null,"RPH17","Protein Ycf2 "]
["D02","GH_D02G1281",null,"RPH17","no"]
["D02","GH_D02G1282",null,"RPH17","no"]
["D02","GH_D02G1283",null,"RPH17","Probable boron transporter 2 "]
["D03","GH_D03G0703",null,"RPH17","no"]
["D03","GH_D03G0704",null,"RPH17","Wall-associated receptor kinase 2"]
["D03","GH_D03G0705",null,"RPH17","no"]
["D08","GH_D08G1461",null,"RSDW16","Putative ribonuclease H protein "]
["D08","GH_D08G1462",null,"RSDW16","no"]
["D08","GH_D08G1463",null,"RSDW16","no"]
["D08","GH_D08G1464",null,"RSDW16","no"]
["D08","GH_D08G1465",null,"RSDW16","Golgi apparatus membrane protein-like protein ECHIDNA "]
["D08","GH_D08G1466",null,"RSDW16","no"]
["D08","GH_D08G1467",null,"RSDW16","ADP-ribosylation factor 2"]
["D08","GH_D08G1468","Up-regulated  in Miscot7913-83","RSDW16","GDSL esterase/lipase At3g62280"]
["D08","GH_D08G1469",null,"RSDW16","Probable boron transporter 2 "]
["D08","GH_D08G1470",null,"RSDW16","no"]
["D08","GH_D08G1471",null,"RSDW16","no"]
["D08","GH_D08G1496",null,"RSDW16","no"]
["D08","GH_D08G1497",null,"RSDW16","ADP-ribosylation factor 1 "]
["D08","GH_D08G1498",null,"RSDW16","no"]
["D08","GH_D08G1499",null,"RSDW16","no"]
["D08","GH_D08G1500",null,"RSDW16","Uncharacterized calcium-binding protein At1g02270 "]
["D08","GH_D08G1501",null,"RSDW16","no"]
["D08","GH_D08G1506",null,"RSDW16","no"]
["D08","GH_D08G1507",null,"RPH16, RPH17, RSDW16","Rho GTPase-activating protein 3 "]
["D08","GH_D08G1508","Up-regulated  in Miscot7913-83","RPH16, RPH17, RSDW16","Auxin-responsive protein SAUR32 "]
["D08","GH_D08G1509",null,"RPH16, RPH17, RSDW16","no"]

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