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{"sheet":"Foglio1","index":0,"n_rows":602376,"n_cols":13,"rows_kept":4500,"cut":true,"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["Supplementary Data 3. Short somatic variants (SNVs and indels) identified in 10 cDLBCL through WGS."]
[]
["Sample #ID","Prognosis group","Chr","Start","End","Ref","Alt","Func.refGene","Gene.refGene","SIFT prediction","GeneDetail.refGene","ExonicFunc.refGene","AAChange.refGene"]
[1,"poor","chr1",16459,16459,"C","T","intergenic","NONE;ENPP1",null,"dist=NONE;dist=235526"]
[1,"poor","chr1",34330,34331,"AG","A","intergenic","NONE;ENPP1",null,"dist=NONE;dist=217654"]
[1,"poor","chr1",34361,34361,"G","A","intergenic","NONE;ENPP1",null,"dist=NONE;dist=217624"]
[1,"poor","chr1",40446,40446,"C","CTTGCAGGCAGATGTCTGCT","intergenic","NONE;ENPP1",null,"dist=NONE;dist=211539"]
[1,"poor","chr1",70202,70202,"C","T","intergenic","NONE;ENPP1",null,"dist=NONE;dist=181783"]
[1,"poor","chr1",76949,76949,"A","C","intergenic","NONE;ENPP1",null,"dist=NONE;dist=175036"]
[1,"poor","chr1",90610,90610,"T","A","intergenic","NONE;ENPP1",null,"dist=NONE;dist=161375"]
[1,"poor","chr1",164319,164319,"A","T","intergenic","NONE;ENPP1",null,"dist=NONE;dist=87666"]
[1,"poor","chr1",166268,166268,"G","A","intergenic","NONE;ENPP1",null,"dist=NONE;dist=85717"]
[1,"poor","chr1",167776,167776,"A","G","intergenic","NONE;ENPP1",null,"dist=NONE;dist=84209"]
[1,"poor","chr1",167920,167920,"C","T","intergenic","NONE;ENPP1",null,"dist=NONE;dist=84065"]
[1,"poor","chr1",168877,168877,"C","T","intergenic","NONE;ENPP1",null,"dist=NONE;dist=83108"]
[1,"poor","chr1",169830,169830,"C","CATGCAGTTCTTTCCTGTTCCACACTGCATGCAG","intergenic","NONE;ENPP1",null,"dist=NONE;dist=82155"]
[1,"poor","chr1",205529,205529,"A","C","intergenic","NONE;ENPP1",null,"dist=NONE;dist=46456"]
[1,"poor","chr1",330238,330238,"A","G","intergenic","ENPP1;PARD6G",null,"dist=8157;dist=148072"]
[1,"poor","chr1",330242,330242,"G","A","intergenic","ENPP1;PARD6G",null,"dist=8161;dist=148068"]
[1,"poor","chr1",478106,478106,"T","C","upstream","PARD6G",null,"dist=204"]
[1,"poor","chr1",533434,533434,"T","TCTGGAGGGCCAGCACTCA","intronic","PARD6G"]
[1,"poor","chr1",537643,537643,"G","C","intronic","PARD6G"]
[1,"poor","chr1",564437,564437,"G","A","intronic","PARD6G"]
[1,"poor","chr1",636395,636395,"C","T","intergenic","ADNP2;LOC100685536",null,"dist=1382;dist=6170"]
[1,"poor","chr1",636396,636396,"A","G","intergenic","ADNP2;LOC100685536",null,"dist=1383;dist=6169"]
[1,"poor","chr1",659551,659551,"G","C","ncRNA_intronic","LOC100685536"]
[1,"poor","chr1",669172,669172,"T","C","ncRNA_intronic","LOC100685536"]
[1,"poor","chr1",705999,705999,"T","A","intronic","RBFA"]
[1,"poor","chr1",706006,706006,"A","ACTGCCAGTGTGGTTTGT","intronic","RBFA"]
[1,"poor","chr1",720871,720871,"C","T","intronic","RBFA"]
[1,"poor","chr1",755674,755674,"T","C","ncRNA_intronic","LOC111091658;LOC111091673"]
[1,"poor","chr1",755677,755677,"G","A","ncRNA_intronic","LOC111091658;LOC111091673"]
[1,"poor","chr1",757670,757670,"G","C","ncRNA_exonic","LOC111091658"]
[1,"poor","chr1",864227,864227,"T","C","intronic","KCNG2"]
[1,"poor","chr1",893254,893254,"C","T","intronic","CTDP1"]
[1,"poor","chr1",896466,896466,"G","C","intronic","CTDP1"]
[1,"poor","chr1",965589,965589,"T","C","ncRNA_intronic","LOC111091841"]
[1,"poor","chr1",998411,998411,"C","CCCCTCT","intergenic","LOC111091841;LOC111090558",null,"dist=30901;dist=5237"]
[1,"poor","chr1",998414,998414,"G","GGGCCTC","intergenic","LOC111091841;LOC111090558",null,"dist=30904;dist=5234"]
[1,"poor","chr1",1099405,1099406,"CT","C","intronic","NFATC1"]
[1,"poor","chr1",1185743,1185743,"A","T","intronic","ATP9B"]
[1,"poor","chr1",1185745,1185745,"G","GA","intronic","ATP9B"]
[1,"poor","chr1",1189931,1189931,"T","G","intronic","ATP9B"]
[1,"poor","chr1",1189932,1189932,"C","A","intronic","ATP9B"]
[1,"poor","chr1",1279945,1279945,"T","C","intronic","ATP9B"]
[1,"poor","chr1",1315592,1315592,"A","G","intronic","ATP9B"]
[1,"poor","chr1",1448261,1448261,"T","C","intergenic","LOC111091992;LOC111092007",null,"dist=11612;dist=12016"]
[1,"poor","chr1",1460688,1460688,"T","TCCTCACGTGCGTGAGCTGCGTACACGCACGTGAGGACCCAGTGGGGAGAGCCTCCCAGTCTGGAG","ncRNA_exonic","LOC111092007"]
[1,"poor","chr1",1498443,1498443,"T","TGTCA","intergenic","LOC111092007;LOC111092029",null,"dist=33124;dist=49679"]
[1,"poor","chr1",1498445,1498445,"A","AAGAGCTGTC","intergenic","LOC111092007;LOC111092029",null,"dist=33126;dist=49677"]
[1,"poor","chr1",1622069,1622069,"C","G","intergenic","LOC111092029;LOC102155992",null,"dist=66650;dist=194675"]
[1,"poor","chr1",1628010,1628010,"T","G","intergenic","LOC111092029;LOC102155992",null,"dist=72591;dist=188734"]
[1,"poor","chr1",1736639,1736639,"G","C","intergenic","LOC111092029;LOC102155992",null,"dist=181220;dist=80105"]
[1,"poor","chr1",1736647,1736647,"C","A","intergenic","LOC111092029;LOC102155992",null,"dist=181228;dist=80097"]
[1,"poor","chr1",1806103,1806103,"A","T","intergenic","LOC111092029;LOC102155992",null,"dist=250684;dist=10641"]
[1,"poor","chr1",1811590,1811590,"C","CCAGGTAGATGGTTCCCGGGAGCACAGTCA","intergenic","LOC111092029;LOC102155992",null,"dist=256171;dist=5154"]
[1,"poor","chr1",1865710,1865710,"G","C","intergenic","LOC111090560;LOC111092037",null,"dist=5249;dist=301739"]
[1,"poor","chr1",1865716,1865716,"T","A","intergenic","LOC111090560;LOC111092037",null,"dist=5255;dist=301733"]
[1,"poor","chr1",2079809,2079809,"A","C","intergenic","LOC111090560;LOC111092037",null,"dist=219348;dist=87640"]
[1,"poor","chr1",2103721,2103721,"G","A","intergenic","LOC111090560;LOC111092037",null,"dist=243260;dist=63728"]
[1,"poor","chr1",2103724,2103724,"T","C","intergenic","LOC111090560;LOC111092037",null,"dist=243263;dist=63725"]
[1,"poor","chr1",2107836,2107836,"G","T","intergenic","LOC111090560;LOC111092037",null,"dist=247375;dist=59613"]
[1,"poor","chr1",2132194,2132194,"A","AGAGG","intergenic","LOC111090560;LOC111092037",null,"dist=271733;dist=35255"]
[1,"poor","chr1",2151420,2151420,"T","A","intergenic","LOC111090560;LOC111092037",null,"dist=290959;dist=16029"]
[1,"poor","chr1",2175719,2175719,"G","A","intergenic","LOC111092037;LOC111092046",null,"dist=2338;dist=127611"]
[1,"poor","chr1",2249827,2249827,"T","G","intergenic","LOC111092037;LOC111092046",null,"dist=76446;dist=53503"]
[1,"poor","chr1",2271169,2271169,"T","C","intergenic","LOC111092037;LOC111092046",null,"dist=97788;dist=32161"]
[1,"poor","chr1",2276180,2276180,"C","CAA","intergenic","LOC111092037;LOC111092046",null,"dist=102799;dist=27150"]
[1,"poor","chr1",2326795,2326795,"G","C","intergenic","LOC111092046;LOC111092121",null,"dist=21477;dist=73063"]
[1,"poor","chr1",2326803,2326803,"C","CGATGGG","intergenic","LOC111092046;LOC111092121",null,"dist=21485;dist=73055"]
[1,"poor","chr1",2328231,2328231,"G","A","intergenic","LOC111092046;LOC111092121",null,"dist=22913;dist=71627"]
[1,"poor","chr1",2387748,2387748,"G","GCATGTGCACACACGCA","intergenic","LOC111092046;LOC111092121",null,"dist=82430;dist=12110"]
[1,"poor","chr1",2387755,2387755,"T","C","intergenic","LOC111092046;LOC111092121",null,"dist=82437;dist=12103"]
[1,"poor","chr1",2418084,2418084,"A","T","intergenic","LOC111090561;LOC111090563",null,"dist=3450;dist=37246"]
[1,"poor","chr1",2438004,2438004,"A","G","intergenic","LOC111090561;LOC111090563",null,"dist=23370;dist=17326"]
[1,"poor","chr1",2507594,2507594,"C","CAAAGGGCATGTCTT","intergenic","LOC111090563;LOC111092137",null,"dist=48228;dist=60741"]
[1,"poor","chr1",2579213,2579213,"A","T","ncRNA_intronic","LOC111092137"]
[1,"poor","chr1",2579214,2579214,"G","GCTTCTCCCTCTGCCTCTGCT","ncRNA_intronic","LOC111092137"]
[1,"poor","chr1",2598331,2598331,"T","C","intergenic","LOC111092137;GALR1",null,"dist=9753;dist=122995"]
[1,"poor","chr1",2598446,2598446,"A","AG","intergenic","LOC111092137;GALR1",null,"dist=9868;dist=122880"]
[1,"poor","chr1",2628061,2628061,"C","CA","intergenic","LOC111092137;GALR1",null,"dist=39483;dist=93265"]
[1,"poor","chr1",2628062,2628062,"C","CCGTTCCTGCCTTCTGGGGGGCCCACATCAGGGTGCAGGCTGCACA","intergenic","LOC111092137;GALR1",null,"dist=39484;dist=93264"]
[1,"poor","chr1",2629067,2629067,"G","C","intergenic","LOC111092137;GALR1",null,"dist=40489;dist=92259"]
[1,"poor","chr1",2629070,2629070,"G","C","intergenic","LOC111092137;GALR1",null,"dist=40492;dist=92256"]
[1,"poor","chr1",2648111,2648111,"T","C","intergenic","LOC111092137;GALR1",null,"dist=59533;dist=73215"]
[1,"poor","chr1",2681953,2681953,"G","GTATA","intergenic","LOC111092137;GALR1",null,"dist=93375;dist=39373"]
[1,"poor","chr1",2798053,2798053,"A","G","intergenic","LOC106559928;MBP",null,"dist=12724;dist=43748"]
[1,"poor","chr1",2847590,2847590,"T","C","intronic","MBP"]
[1,"poor","chr1",2849061,2849061,"C","G","intronic","MBP"]
[1,"poor","chr1",2891208,2891208,"T","TGCACACGGGAGCAGGTGCAC","intronic","MBP"]
[1,"poor","chr1",2917356,2917356,"C","CTCAGGGGCT","intronic","MBP"]
[1,"poor","chr1",2923822,2923822,"C","T","intronic","MBP"]
[1,"poor","chr1",3062376,3062376,"G","GGGGTCCCCTTCCCC","upstream","ZNF236",null,"dist=27"]
[1,"poor","chr1",3062380,3062380,"A","G","upstream","ZNF236",null,"dist=31"]
[1,"poor","chr1",3077650,3077650,"C","G","intergenic","LOC111092339;LOC102156552",null,"dist=9778;dist=8137"]
[1,"poor","chr1",3077651,3077651,"C","G","intergenic","LOC111092339;LOC102156552",null,"dist=9779;dist=8136"]
[1,"poor","chr1",3280021,3280021,"A","G","intronic","ZNF516"]
[1,"poor","chr1",3303780,3303780,"A","G","intronic","ZNF516"]
[1,"poor","chr1",3436500,3436504,"TAGAA","T","intergenic","LOC111092528;LOC102157008",null,"dist=23324;dist=36788"]
[1,"poor","chr1",3570254,3570255,"CA","C","intergenic","LOC102157008;LOC111092546",null,"dist=55006;dist=541734"]
[1,"poor","chr1",3767353,3767353,"A","G","intergenic","LOC102157008;LOC111092546",null,"dist=252105;dist=344636"]
[1,"poor","chr1",3767363,3767363,"T","G","intergenic","LOC102157008;LOC111092546",null,"dist=252115;dist=344626"]
[1,"poor","chr1",3893085,3893085,"C","T","intergenic","LOC102157008;LOC111092546",null,"dist=377837;dist=218904"]
[1,"poor","chr1",3948184,3948184,"C","T","intergenic","LOC102157008;LOC111092546",null,"dist=432936;dist=163805"]
[1,"poor","chr1",3968600,3968600,"C","T","intergenic","LOC102157008;LOC111092546",null,"dist=453352;dist=143389"]
[1,"poor","chr1",3968850,3968850,"C","G","intergenic","LOC102157008;LOC111092546",null,"dist=453602;dist=143139"]
[1,"poor","chr1",3968851,3968851,"C","T","intergenic","LOC102157008;LOC111092546",null,"dist=453603;dist=143138"]
[1,"poor","chr1",4020913,4020913,"A","G","intergenic","LOC102157008;LOC111092546",null,"dist=505665;dist=91076"]
[1,"poor","chr1",4146966,4146966,"A","G","intergenic","LOC111092546;TSHZ1",null,"dist=33518;dist=77909"]
[1,"poor","chr1",4175701,4175701,"G","A","intergenic","LOC111092546;TSHZ1",null,"dist=62253;dist=49174"]
[1,"poor","chr1",4223728,4223728,"C","T","intergenic","LOC111092546;TSHZ1",null,"dist=110280;dist=1147"]
[1,"poor","chr1",4235169,4235169,"G","C","intergenic","TSHZ1;LOC111092553",null,"dist=5414;dist=31105"]
[1,"poor","chr1",4312404,4312404,"G","A","downstream","ZADH2",null,"dist=729"]
[1,"poor","chr1",4399913,4399913,"C","A","intergenic","ZADH2;ZNF407",null,"dist=88238;dist=21473"]
[1,"poor","chr1",4537882,4537882,"A","G","intronic","ZNF407"]
[1,"poor","chr1",4591221,4591221,"C","A","intronic","ZNF407"]
[1,"poor","chr1",4629385,4629399,"CAGGGCAGGGGACCT","C","intronic","ZNF407"]
[1,"poor","chr1",4696341,4696341,"T","C","intronic","ZNF407"]
[1,"poor","chr1",4864844,4864844,"C","CCTTCTTGAGTGTTAATATTACAAGAGATAAAAGTTAGCTGGATTCTTCAGG","intronic","ZNF407"]
[1,"poor","chr1",4905405,4905405,"T","C","intronic","CNDP1"]
[1,"poor","chr1",4920960,4920960,"A","T","intronic","CNDP2"]
[1,"poor","chr1",4920965,4920965,"C","CCAGGTCCTCAGG","intronic","CNDP2"]
[1,"poor","chr1",4924972,4924972,"T","C","intronic","CNDP2"]
[1,"poor","chr1",4953944,4953944,"C","G","upstream","FAM69C",null,"dist=171"]
[1,"poor","chr1",5002821,5002821,"A","G","intergenic","FAM69C;C1H18orf63",null,"dist=22544;dist=25434"]
[1,"poor","chr1",5033927,5033927,"A","C","intronic","C1H18orf63"]
[1,"poor","chr1",5150106,5150106,"T","C","intergenic","CYB5A;TIMM21",null,"dist=43438;dist=25596"]
[1,"poor","chr1",5151542,5151542,"T","A","intergenic","CYB5A;TIMM21",null,"dist=44874;dist=24160"]
[1,"poor","chr1",5195437,5195437,"T","C","intronic","FBXO15"]
[1,"poor","chr1",5247816,5247818,"CAA","C","intergenic","FBXO15;LOC111092948",null,"dist=16296;dist=85339"]
[1,"poor","chr1",5247819,5247819,"A","ATTTC","intergenic","FBXO15;LOC111092948",null,"dist=16299;dist=85338"]
[1,"poor","chr1",5374713,5374713,"G","GCTGAATCTCACCCC","ncRNA_intronic","LOC111090570"]
[1,"poor","chr1",5381962,5381962,"T","TG","intergenic","LOC111090570;LOC106559384",null,"dist=5334;dist=2132"]
[1,"poor","chr1",5381968,5381969,"GC","G","intergenic","LOC111090570;LOC106559384",null,"dist=5340;dist=2125"]
[1,"poor","chr1",5386712,5386712,"C","T","ncRNA_intronic","LOC106559384"]
[1,"poor","chr1",5386716,5386716,"G","T","ncRNA_intronic","LOC106559384"]
[1,"poor","chr1",5405602,5405602,"T","C","ncRNA_intronic","LOC106559384"]
[1,"poor","chr1",5422675,5422675,"A","ATTCCCT","intergenic","LOC106559384;LOC111092970",null,"dist=4317;dist=124954"]
[1,"poor","chr1",5441525,5441525,"C","CCATAAATAAGAGGTTTGAGATAAG","intergenic","LOC106559384;LOC111092970",null,"dist=23167;dist=106104"]
[1,"poor","chr1",5591378,5591378,"T","G","intergenic","LOC111090571;LOC111090572",null,"dist=25605;dist=25228"]
[1,"poor","chr1",5591389,5591389,"C","A","intergenic","LOC111090571;LOC111090572",null,"dist=25616;dist=25217"]
[1,"poor","chr1",5668240,5668242,"CGG","C","intergenic","LOC111090572;LOC111092976",null,"dist=19644;dist=442935"]
[1,"poor","chr1",5668245,5668245,"C","A","intergenic","LOC111090572;LOC111092976",null,"dist=19649;dist=442932"]
[1,"poor","chr1",5726804,5726804,"T","C","intergenic","LOC111090572;LOC111092976",null,"dist=78208;dist=384373"]
[1,"poor","chr1",5839020,5839020,"G","A","intergenic","LOC111090572;LOC111092976",null,"dist=190424;dist=272157"]
[1,"poor","chr1",5910565,5910565,"T","C","intergenic","LOC111090572;LOC111092976",null,"dist=261969;dist=200612"]
[1,"poor","chr1",5974135,5974135,"T","C","intergenic","LOC111090572;LOC111092976",null,"dist=325539;dist=137042"]
[1,"poor","chr1",5978707,5978707,"T","C","intergenic","LOC111090572;LOC111092976",null,"dist=330111;dist=132470"]
[1,"poor","chr1",5978726,5978726,"C","T","intergenic","LOC111090572;LOC111092976",null,"dist=330130;dist=132451"]
[1,"poor","chr1",6011030,6011030,"A","G","intergenic","LOC111090572;LOC111092976",null,"dist=362434;dist=100147"]
[1,"poor","chr1",6019516,6019516,"C","G","intergenic","LOC111090572;LOC111092976",null,"dist=370920;dist=91661"]
[1,"poor","chr1",6042145,6042145,"G","A","intergenic","LOC111090572;LOC111092976",null,"dist=393549;dist=69032"]
[1,"poor","chr1",6112102,6112102,"A","ACACG","ncRNA_intronic","LOC111092976"]
[1,"poor","chr1",6148136,6148136,"A","T","intronic","NETO1"]
[1,"poor","chr1",6148143,6148143,"A","T","intronic","NETO1"]
[1,"poor","chr1",6175011,6175011,"T","A","intronic","NETO1"]
[1,"poor","chr1",6258940,6258940,"C","CAGAGAGAG","ncRNA_intronic","LOC111093124"]
[1,"poor","chr1",6258958,6258958,"C","T","ncRNA_intronic","LOC111093124"]
[1,"poor","chr1",6310176,6310176,"G","A","intergenic","LOC111093150;CBLN2",null,"dist=35535;dist=67977"]
[1,"poor","chr1",6326600,6326600,"T","G","intergenic","LOC111093150;CBLN2",null,"dist=51959;dist=51553"]
[1,"poor","chr1",6592177,6592177,"T","C","intergenic","CBLN2;LOC111090576",null,"dist=207618;dist=506275"]
[1,"poor","chr1",6693381,6693381,"C","G","intergenic","CBLN2;LOC111090576",null,"dist=308822;dist=405071"]
[1,"poor","chr1",6706250,6706250,"T","G","intergenic","CBLN2;LOC111090576",null,"dist=321691;dist=392202"]
[1,"poor","chr1",6803158,6803158,"T","C","intergenic","CBLN2;LOC111090576",null,"dist=418599;dist=295294"]
[1,"poor","chr1",6824667,6824667,"A","AGCCCCCCGAG","intergenic","CBLN2;LOC111090576",null,"dist=440108;dist=273785"]
[1,"poor","chr1",6844017,6844017,"G","A","intergenic","CBLN2;LOC111090576","TOLERATED","dist=459458;dist=254435"]
[1,"poor","chr1",6844021,6844021,"G","GTCACACCTTCCTTCGACCAA","intergenic","CBLN2;LOC111090576","NA","dist=459462;dist=254431"]
[1,"poor","chr1",6917314,6917314,"A","T","intergenic","CBLN2;LOC111090576",null,"dist=532755;dist=181138"]
[1,"poor","chr1",6985143,6985143,"A","G","intergenic","CBLN2;LOC111090576",null,"dist=600584;dist=113309"]
[1,"poor","chr1",7032599,7032599,"G","A","intergenic","CBLN2;LOC111090576",null,"dist=648040;dist=65853"]
[1,"poor","chr1",7081146,7081146,"T","TCCC","intergenic","CBLN2;LOC111090576",null,"dist=696587;dist=17306"]
[1,"poor","chr1",7081147,7081147,"T","TGAAGTGC","intergenic","CBLN2;LOC111090576",null,"dist=696588;dist=17305"]
[1,"poor","chr1",7138461,7138461,"A","G","intergenic","LOC111090576;LOC111090579",null,"dist=16316;dist=95129"]
[1,"poor","chr1",7291145,7291145,"T","C","intergenic","LOC111090579;LOC111090580",null,"dist=55024;dist=394096"]
[1,"poor","chr1",7291147,7291147,"C","G","intergenic","LOC111090579;LOC111090580",null,"dist=55026;dist=394094"]
[1,"poor","chr1",7655565,7655565,"A","G","intergenic","LOC111090579;LOC111090580",null,"dist=419444;dist=29676"]
[1,"poor","chr1",7680272,7680274,"ACT","A","intergenic","LOC111090579;LOC111090580",null,"dist=444151;dist=4967"]
[1,"poor","chr1",7680277,7680277,"T","TGA","intergenic","LOC111090579;LOC111090580",null,"dist=444156;dist=4964"]
[1,"poor","chr1",7972098,7972098,"G","A","ncRNA_intronic","LOC102152782"]
[1,"poor","chr1",8160335,8160337,"TGC","T","intergenic","SOCS6;RTTN",null,"dist=42684;dist=20494"]
[1,"poor","chr1",8160351,8160351,"T","C","intergenic","SOCS6;RTTN",null,"dist=42700;dist=20480"]
[1,"poor","chr1",8160428,8160428,"T","C","intergenic","SOCS6;RTTN",null,"dist=42777;dist=20403"]
[1,"poor","chr1",8209923,8209923,"C","T","intronic","RTTN"]
[1,"poor","chr1",8328736,8328736,"G","C","intergenic","RTTN;CD226",null,"dist=1789;dist=19892"]
[1,"poor","chr1",8469233,8469233,"G","A","intronic","DOK6"]
[1,"poor","chr1",8835051,8835051,"A","T","intergenic","DOK6;CCDC102B",null,"dist=127451;dist=367801"]
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[1,"poor","chr1",21293271,21293271,"A","G","intergenic","MBD2;LOC102154621",null,"dist=9584;dist=291220"]
[1,"poor","chr1",21332983,21332983,"A","T","intergenic","MBD2;LOC102154621",null,"dist=49296;dist=251508"]
[1,"poor","chr1",21333002,21333003,"TG","T","intergenic","MBD2;LOC102154621",null,"dist=49315;dist=251488"]
[1,"poor","chr1",21816234,21816234,"G","A","intronic","DCC"]
[1,"poor","chr1",21822358,21822358,"G","C","intronic","DCC"]
[1,"poor","chr1",21822363,21822363,"G","C","intronic","DCC"]
[1,"poor","chr1",21854365,21854365,"T","A","intronic","DCC"]
[1,"poor","chr1",22178318,22178318,"G","T","intronic","DCC"]
[1,"poor","chr1",22178321,22178321,"A","C","intronic","DCC"]
[1,"poor","chr1",22496997,22496997,"C","A","intergenic","DCC;LOC111090624",null,"dist=2148;dist=477775"]
[1,"poor","chr1",22496998,22496998,"T","G","intergenic","DCC;LOC111090624",null,"dist=2149;dist=477774"]
[1,"poor","chr1",22540085,22540085,"G","A","intergenic","DCC;LOC111090624",null,"dist=45236;dist=434687"]
[1,"poor","chr1",22553589,22553591,"TAC","T","intergenic","DCC;LOC111090624",null,"dist=58740;dist=421181"]
[1,"poor","chr1",22581112,22581112,"G","C","intergenic","DCC;LOC111090624",null,"dist=86263;dist=393660"]
[1,"poor","chr1",22581120,22581120,"G","GTAGTTC","intergenic","DCC;LOC111090624",null,"dist=86271;dist=393652"]
[1,"poor","chr1",22600807,22600807,"C","A","intergenic","DCC;LOC111090624",null,"dist=105958;dist=373965"]
[1,"poor","chr1",22600808,22600808,"G","GT","intergenic","DCC;LOC111090624",null,"dist=105959;dist=373964"]
[1,"poor","chr1",22651330,22651330,"T","C","intergenic","DCC;LOC111090624",null,"dist=156481;dist=323442"]
[1,"poor","chr1",22651331,22651331,"G","A","intergenic","DCC;LOC111090624",null,"dist=156482;dist=323441"]
[1,"poor","chr1",22701646,22701646,"A","C","intergenic","DCC;LOC111090624",null,"dist=206797;dist=273126"]
[1,"poor","chr1",22701651,22701651,"G","T","intergenic","DCC;LOC111090624",null,"dist=206802;dist=273121"]
[1,"poor","chr1",22728708,22728708,"C","T","intergenic","DCC;LOC111090624",null,"dist=233859;dist=246064"]
[1,"poor","chr1",23049621,23049621,"G","A","intergenic","LOC111090624;LOC102154698",null,"dist=44052;dist=455973"]
[1,"poor","chr1",23050084,23050084,"T","C","intergenic","LOC111090624;LOC102154698",null,"dist=44515;dist=455510"]
[1,"poor","chr1",23075566,23075566,"A","G","intergenic","LOC111090624;LOC102154698",null,"dist=69997;dist=430028"]
[1,"poor","chr1",23157217,23157217,"C","CTG","intergenic","LOC111090624;LOC102154698",null,"dist=151648;dist=348377"]
[1,"poor","chr1",23157223,23157225,"TCA","T","intergenic","LOC111090624;LOC102154698",null,"dist=151654;dist=348369"]
[1,"poor","chr1",23163495,23163495,"G","T","intergenic","LOC111090624;LOC102154698",null,"dist=157926;dist=342099"]
[1,"poor","chr1",23302739,23302739,"A","AGG","intergenic","LOC111090624;LOC102154698",null,"dist=297170;dist=202855"]
[1,"poor","chr1",23302745,23302745,"G","C","intergenic","LOC111090624;LOC102154698",null,"dist=297176;dist=202849"]
[1,"poor","chr1",23388094,23388095,"AC","A","intergenic","LOC111090624;LOC102154698",null,"dist=382525;dist=117499"]
[1,"poor","chr1",23470916,23470916,"G","C","intergenic","LOC111090624;LOC102154698",null,"dist=465347;dist=34678"]
[1,"poor","chr1",23470922,23470922,"C","CCCCAAGG","intergenic","LOC111090624;LOC102154698",null,"dist=465353;dist=34672"]
[1,"poor","chr1",23479340,23479340,"T","G","intergenic","LOC111090624;LOC102154698",null,"dist=473771;dist=26254"]
[1,"poor","chr1",23479345,23479345,"C","A","intergenic","LOC111090624;LOC102154698",null,"dist=473776;dist=26249"]
[1,"poor","chr1",23709114,23709114,"T","C","intergenic","LOC102154698;MEX3C",null,"dist=200056;dist=109676"]
[1,"poor","chr1",23742258,23742272,"AGTCTCTCATGTTCT","A","intergenic","LOC102154698;MEX3C",null,"dist=233200;dist=76518"]
[1,"poor","chr1",23742314,23742314,"C","T","intergenic","LOC102154698;MEX3C",null,"dist=233256;dist=76476"]
[1,"poor","chr1",23780614,23780614,"G","GTCTAGC","intergenic","LOC102154698;MEX3C",null,"dist=271556;dist=38176"]
[1,"poor","chr1",23851848,23851848,"G","A","intergenic","MEX3C;SMAD4",null,"dist=13742;dist=24141"]
[1,"poor","chr1",23851853,23851853,"C","T","intergenic","MEX3C;SMAD4",null,"dist=13747;dist=24136"]
[1,"poor","chr1",23881872,23881872,"A","ACTACTTCTGTTGCT","UTR3","SMAD4",null,"XM_022416898.1:c.*616T>AGCAACAGAAGTAGT;XM_022416902.1:c.*616T>AGCAACAGAAGTAGT;XM_022416903.1:c.*616T>AGCAACAGAAGTAGT;XM_022416897.1:c.*616T>AGCAACAGAAGTAGT;XM_022416896.1:c.*616T>AGCAACAGAAGTAGT"]
[1,"poor","chr1",23881874,23881874,"A","AAGGGATGCTGGGAACTTCAGATGGCCTTTTTGAAAGTGAGTAG","UTR3","SMAD4",null,"XM_022416898.1:c.*614T>CTACTCACTTTCAAAAAGGCCATCTGAAGTTCCCAGCATCCCTT;XM_022416902.1:c.*614T>CTACTCACTTTCAAAAAGGCCATCTGAAGTTCCCAGCATCCCTT;XM_022416903.1:c.*614T>CTACTCACTTTCAAAAAGGCCATCTGAAGTTCCCAGCATCCCTT;XM_022416897.1:c.*614T>CTACTCACTTTCAAAAAGGCCATCTGAAGTTCCCAGCATCCCTT;XM_022416896.1:c.*614T>CTACTCACTTTCAAAAAGGCCATCTGAAGTTCCCAGCATCCCTT"]
[1,"poor","chr1",23961698,23961698,"A","AC","intronic","ELAC1"]
[1,"poor","chr1",23961701,23961702,"AG","A","intronic","ELAC1"]
[1,"poor","chr1",24028745,24028745,"C","A","intronic","ME2"]
[1,"poor","chr1",24049645,24049645,"A","T","intergenic","ME2;MRO",null,"dist=17003;dist=23485"]
[1,"poor","chr1",24049646,24049646,"G","T","intergenic","ME2;MRO",null,"dist=17004;dist=23484"]
[1,"poor","chr1",24128261,24128261,"A","ACTCAC","intergenic","MRO;LOC106559532",null,"dist=34936;dist=89756"]
[1,"poor","chr1",24308057,24308057,"C","A","intergenic","LOC106559532;LOC111095227",null,"dist=48341;dist=26579"]
[1,"poor","chr1",24319926,24319926,"C","T","intergenic","LOC106559532;LOC111095227",null,"dist=60210;dist=14710"]
[1,"poor","chr1",24439038,24439038,"G","A","intergenic","MC5R;RNMT",null,"dist=5826;dist=26596"]
[1,"poor","chr1",24439042,24439042,"A","G","intergenic","MC5R;RNMT",null,"dist=5830;dist=26592"]
[1,"poor","chr1",24516937,24516937,"G","GGAA","intronic","FAM210A"]
[1,"poor","chr1",24542648,24542648,"C","T","intronic","LDLRAD4"]
[1,"poor","chr1",24542654,24542654,"A","C","intronic","LDLRAD4"]
[1,"poor","chr1",24597003,24597003,"T","C","intronic","LDLRAD4"]
[1,"poor","chr1",24845810,24845810,"A","G","intronic","LDLRAD4"]
[1,"poor","chr1",24892498,24892498,"A","C","intronic","LDLRAD4"]
[1,"poor","chr1",24892499,24892499,"G","C","intronic","LDLRAD4"]
[1,"poor","chr1",24909463,24909463,"T","TGGGCACTTCTATGTTTTAAGGCCCAGCGTA","intronic","LDLRAD4"]
[1,"poor","chr1",24986262,24986266,"AGGCT","A","intergenic","LDLRAD4;MOXD1",null,"dist=58827;dist=32186"]
[1,"poor","chr1",25023438,25023438,"G","C","intronic","MOXD1"]
[1,"poor","chr1",25124405,25124405,"T","G","intergenic","TUBB4B;LOC111095250",null,"dist=4311;dist=114448"]
[1,"poor","chr1",25141909,25141909,"C","T","intergenic","TUBB4B;LOC111095250",null,"dist=21815;dist=96944"]
[1,"poor","chr1",25146031,25146031,"G","C","intergenic","TUBB4B;LOC111095250",null,"dist=25937;dist=92822"]
[1,"poor","chr1",25266879,25266880,"TA","T","intergenic","LOC111095250;LOC102156553",null,"dist=27033;dist=4838"]
[1,"poor","chr1",25266883,25266883,"G","T","intergenic","LOC111095250;LOC102156553",null,"dist=27037;dist=4835"]
[1,"poor","chr1",25273689,25273689,"T","A","ncRNA_intronic","LOC102156553"]
[1,"poor","chr1",25273691,25273691,"G","T","ncRNA_intronic","LOC102156553"]
[1,"poor","chr1",25356222,25356222,"C","G","downstream","LOC102156553",null,"dist=549"]
[1,"poor","chr1",25385303,25385303,"C","CT","intergenic","LOC102156553;LOC111090010",null,"dist=29630;dist=49879"]
[1,"poor","chr1",25476104,25476104,"G","A","ncRNA_intronic","LOC111090010"]
[1,"poor","chr1",25508035,25508035,"G","GCAT","ncRNA_intronic","LOC111090010","NA"]
[1,"poor","chr1",25528387,25528387,"T","A","intergenic","CTGF;STX7",null,"dist=17329;dist=15896"]
[1,"poor","chr1",25535507,25535507,"A","G","intergenic","CTGF;STX7",null,"dist=24449;dist=8776"]
[1,"poor","chr1",25535524,25535524,"T","G","intergenic","CTGF;STX7",null,"dist=24466;dist=8759"]
[1,"poor","chr1",25586170,25586170,"A","T","intronic","STX7"]
[1,"poor","chr1",25614073,25614073,"G","A","intergenic","STX7;VNN1",null,"dist=6894;dist=63966"]
[1,"poor","chr1",25614079,25614079,"T","A","intergenic","STX7;VNN1",null,"dist=6900;dist=63960"]
[1,"poor","chr1",25655962,25655962,"C","T","intergenic","STX7;VNN1",null,"dist=48783;dist=22077"]
[1,"poor","chr1",25666835,25666835,"G","A","intergenic","STX7;VNN1",null,"dist=59656;dist=11204"]
[1,"poor","chr1",25711282,25711282,"A","G","intergenic","VNN1;LOC102155259",null,"dist=6703;dist=23694"]
[1,"poor","chr1",25728137,25728137,"A","C","intergenic","VNN1;LOC102155259",null,"dist=23558;dist=6839"]
[1,"poor","chr1",25728156,25728156,"A","G","intergenic","VNN1;LOC102155259",null,"dist=23577;dist=6820"]
[1,"poor","chr1",25734625,25734625,"A","T","upstream","LOC102155259",null,"dist=351"]
[1,"poor","chr1",25763826,25763826,"A","G","intergenic","LOC102155259;SLC18B1",null,"dist=1832;dist=34166"]
[1,"poor","chr1",25817831,25817831,"G","C","intronic","SLC18B1"]
[1,"poor","chr1",25817838,25817842,"TCCAA","T","intronic","SLC18B1"]
[1,"poor","chr1",25858597,25858597,"C","A","intergenic","LOC476206;LOC102157343",null,"dist=19449;dist=78905"]
[1,"poor","chr1",25858599,25858599,"A","T","intergenic","LOC476206;LOC102157343",null,"dist=19451;dist=78903"]
[1,"poor","chr1",25973274,25973274,"C","CCAGA","ncRNA_intronic","LOC111095276"]
[1,"poor","chr1",25973276,25973280,"TTCTG","T","ncRNA_intronic","LOC111095276"]
[1,"poor","chr1",26101882,26101898,"TTGTGTGTGTGTGTGTG","T","intergenic","LOC476208;LOC111095280",null,"dist=71006;dist=9547"]
[1,"poor","chr1",26251515,26251515,"C","CTG","intronic","EYA4"]
[1,"poor","chr1",26395687,26395687,"G","C","intronic","EYA4"]
[1,"poor","chr1",26412921,26412921,"T","TGTA","intronic","EYA4"]
[1,"poor","chr1",26412926,26412929,"CCTA","C","intronic","EYA4"]
[1,"poor","chr1",26425566,26425566,"C","G","intronic","EYA4"]
[1,"poor","chr1",26594468,26594468,"A","C","intergenic","EYA4;TCF21",null,"dist=79867;dist=261813"]
[1,"poor","chr1",26594469,26594469,"G","T","intergenic","EYA4;TCF21",null,"dist=79868;dist=261812"]
[1,"poor","chr1",26617831,26617831,"A","AG","intergenic","EYA4;TCF21",null,"dist=103230;dist=238450"]
[1,"poor","chr1",26617834,26617835,"AC","A","intergenic","EYA4;TCF21",null,"dist=103233;dist=238446"]
[1,"poor","chr1",26654991,26654991,"A","G","intergenic","EYA4;TCF21",null,"dist=140390;dist=201290"]
[1,"poor","chr1",26680690,26680690,"G","C","intergenic","EYA4;TCF21",null,"dist=166089;dist=175591"]
[1,"poor","chr1",26680698,26680698,"G","T","intergenic","EYA4;TCF21",null,"dist=166097;dist=175583"]
[1,"poor","chr1",26682392,26682392,"A","C","intergenic","EYA4;TCF21",null,"dist=167791;dist=173889"]
[1,"poor","chr1",26682396,26682396,"C","A","intergenic","EYA4;TCF21",null,"dist=167795;dist=173885"]
[1,"poor","chr1",26685444,26685444,"A","C","intergenic","EYA4;TCF21",null,"dist=170843;dist=170837"]
[1,"poor","chr1",26718408,26718408,"G","T","intergenic","EYA4;TCF21",null,"dist=203807;dist=137873"]
[1,"poor","chr1",26881844,26881844,"G","A","intergenic","TCF21;TBPL1",null,"dist=22190;dist=16500"]
[1,"poor","chr1",26881847,26881847,"G","A","intergenic","TCF21;TBPL1",null,"dist=22193;dist=16497"]
[1,"poor","chr1",26892849,26892849,"C","A","intergenic","TCF21;TBPL1",null,"dist=33195;dist=5495"]
[1,"poor","chr1",26971434,26971434,"T","C","intronic","SLC2A12"]
[1,"poor","chr1",26971441,26971441,"T","C","intronic","SLC2A12"]
[1,"poor","chr1",26988240,26988240,"A","T","intronic","SLC2A12"]
[1,"poor","chr1",26996307,26996307,"C","T","intergenic","SLC2A12;SGK1",null,"dist=2449;dist=90124"]
[1,"poor","chr1",27145309,27145309,"C","CCCAAAGGGTAGAGAGGAGGCAGTGGGGCCTCCAGGCCTCCCACTCTCCCCTTTGGGTCCTGA","intronic","SGK1"]
[1,"poor","chr1",27190413,27190413,"A","G","intronic","SGK1"]
[1,"poor","chr1",27311432,27311432,"A","AAGCCTT","intergenic","SGK1;LOC102151837",null,"dist=114831;dist=11060"]
[1,"poor","chr1",27311441,27311441,"C","G","intergenic","SGK1;LOC102151837",null,"dist=114840;dist=11051"]
[1,"poor","chr1",27374357,27374357,"A","G","downstream","LOC106558449",null,"dist=431"]
[1,"poor","chr1",27422274,27422274,"T","C","intergenic","LOC106558449;LOC106559542",null,"dist=34195;dist=144777"]
[1,"poor","chr1",27480302,27480302,"C","T","intergenic","LOC106558449;LOC106559542",null,"dist=92223;dist=86749"]
[1,"poor","chr1",27552565,27552565,"C","T","intergenic","LOC106558449;LOC106559542",null,"dist=164486;dist=14486"]
[1,"poor","chr1",27552568,27552568,"A","G","intergenic","LOC106558449;LOC106559542",null,"dist=164489;dist=14483"]
[1,"poor","chr1",27593272,27593272,"G","C","ncRNA_intronic","LOC106559542"]
[1,"poor","chr1",27646016,27646022,"GTGAGGA","G","intergenic","LOC106559542;ALDH8A1",null,"dist=33590;dist=26400"]
[1,"poor","chr1",27677992,27677992,"A","G","intronic","ALDH8A1"]
[1,"poor","chr1",27691645,27691645,"C","CTTA","intronic","ALDH8A1"]
[1,"poor","chr1",27698641,27698641,"C","CCAGCGGATGAT","intergenic","ALDH8A1;HBS1L",null,"dist=3612;dist=5734"]
[1,"poor","chr1",27883507,27883507,"T","G","intergenic","HBS1L;MYB",null,"dist=92131;dist=24802"]
[1,"poor","chr1",28238635,28238639,"GATCA","G","ncRNA_intronic","LOC102152959;LOC102153001"]
[1,"poor","chr1",28238641,28238641,"G","GTGAT","ncRNA_intronic","LOC102152959;LOC102153001"]
[1,"poor","chr1",28304865,28304865,"C","A","intergenic","LOC102152959;LOC102153582",null,"dist=23445;dist=28194"]
[1,"poor","chr1",28422892,28422892,"A","C","intergenic","LOC102153582;PDE7B",null,"dist=68295;dist=56749"]
[1,"poor","chr1",28626454,28626454,"C","G","intronic","PDE7B"]
[1,"poor","chr1",28827776,28827776,"A","ATGGAACTGGAGGGTATTTTTTTTTTTT","intergenic","PDE7B;MTFR2",null,"dist=32132;dist=3042"]
[1,"poor","chr1",28915006,28915006,"T","C","intergenic","LOC106558576;MAP7",null,"dist=4516;dist=18416"]
[1,"poor","chr1",28915031,28915031,"T","C","intergenic","LOC106558576;MAP7",null,"dist=4541;dist=18391"]
[1,"poor","chr1",29059964,29059964,"C","T","intronic","MAP7"]
[1,"poor","chr1",29065277,29065277,"A","G","intronic","MAP7"]
[1,"poor","chr1",29132030,29132036,"TTAAGAG","T","intronic","MAP3K5"]
[1,"poor","chr1",29133003,29133007,"TGCAA","T","intronic","MAP3K5"]
[1,"poor","chr1",29138154,29138155,"GT","G","intronic","MAP3K5"]
[1,"poor","chr1",29138161,29138161,"C","CA","intronic","MAP3K5"]
[1,"poor","chr1",29145003,29145003,"T","A","intronic","MAP3K5"]
[1,"poor","chr1",29214894,29214894,"G","A","intronic","MAP3K5"]
[1,"poor","chr1",29255774,29255774,"T","C","intronic","MAP3K5"]
[1,"poor","chr1",29255783,29255783,"G","C","intronic","MAP3K5"]
[1,"poor","chr1",29281901,29281901,"A","T","intronic","MAP3K5"]
[1,"poor","chr1",29314576,29314576,"C","G","intergenic","MAP3K5;PEX7",null,"dist=8139;dist=22786"]
[1,"poor","chr1",29314586,29314586,"C","CCCA","intergenic","MAP3K5;PEX7",null,"dist=8149;dist=22776"]
[1,"poor","chr1",29359580,29359580,"A","C","intronic","PEX7"]
[1,"poor","chr1",29359585,29359585,"G","T","intronic","PEX7"]
[1,"poor","chr1",29513688,29513688,"A","C","intronic","IL20RA"]
[1,"poor","chr1",29513691,29513691,"A","T","intronic","IL20RA"]
[1,"poor","chr1",29516289,29516289,"T","TCC","intronic","IL20RA"]
[1,"poor","chr1",29516293,29516293,"A","ATCAC","intronic","IL20RA"]
[1,"poor","chr1",29620060,29620060,"G","C","intronic","IL22RA2"]
[1,"poor","chr1",29620061,29620061,"G","C","intronic","IL22RA2"]
[1,"poor","chr1",29661579,29661579,"A","T","intronic","IFNGR1"]
[1,"poor","chr1",29707421,29707421,"C","T","intergenic","IFNGR1;LOC102155165",null,"dist=37752;dist=27617"]
[1,"poor","chr1",29751342,29751342,"T","C","intergenic","LOC102155165;LOC111090647",null,"dist=3153;dist=5021"]
[1,"poor","chr1",29884775,29884775,"G","A","intergenic","LOC111090647;OLIG3",null,"dist=88921;dist=34268"]
[1,"poor","chr1",30054162,30054162,"C","T","intergenic","LOC111090650;TNFAIP3",null,"dist=93947;dist=193270"]
[1,"poor","chr1",30054167,30054167,"A","T","intergenic","LOC111090650;TNFAIP3",null,"dist=93952;dist=193265"]
[1,"poor","chr1",30166538,30166538,"C","T","intergenic","LOC111090650;TNFAIP3",null,"dist=206323;dist=80894"]
[1,"poor","chr1",30193858,30193858,"G","T","intergenic","LOC111090650;TNFAIP3",null,"dist=233643;dist=53574"]
[1,"poor","chr1",30279984,30279988,"GAAAA","G","intergenic","TNFAIP3;LOC111090652",null,"dist=16992;dist=33760"]
[1,"poor","chr1",30468048,30468048,"C","T","intergenic","PERP;ARFGEF3",null,"dist=32761;dist=14327"]
[1,"poor","chr1",30468054,30468055,"AG","A","intergenic","PERP;ARFGEF3",null,"dist=32767;dist=14320"]
[1,"poor","chr1",30584760,30584760,"T","A","intronic","ARFGEF3"]
[1,"poor","chr1",30584763,30584763,"T","A","intronic","ARFGEF3"]
[1,"poor","chr1",30679711,30679711,"T","C","intergenic","ARFGEF3;LOC111095460",null,"dist=21005;dist=32301"]
[1,"poor","chr1",30690663,30690663,"G","A","intergenic","ARFGEF3;LOC111095460",null,"dist=31957;dist=21349"]
[1,"poor","chr1",30696285,30696285,"C","T","intergenic","ARFGEF3;LOC111095460",null,"dist=37579;dist=15727"]
[1,"poor","chr1",30721557,30721557,"C","T","intronic","HEBP2"]
[1,"poor","chr1",30721564,30721564,"T","C","intronic","HEBP2"]
[1,"poor","chr1",30736815,30736819,"AGTGT","A","intergenic","HEBP2;NHSL1",null,"dist=12001;dist=1547"]
[1,"poor","chr1",30883289,30883289,"A","T","intergenic","NHSL1;CCDC28A",null,"dist=10730;dist=160813"]
[1,"poor","chr1",30896297,30896297,"G","A","intergenic","NHSL1;CCDC28A",null,"dist=23738;dist=147805"]
[1,"poor","chr1",30896299,30896299,"C","CCA","intergenic","NHSL1;CCDC28A",null,"dist=23740;dist=147803"]
[1,"poor","chr1",30908569,30908569,"C","T","intergenic","NHSL1;CCDC28A",null,"dist=36010;dist=135533"]
[1,"poor","chr1",31067949,31067949,"A","G","intergenic","LOC111095472;ECT2L",null,"dist=7865;dist=1719"]
[1,"poor","chr1",31381200,31381200,"T","C","intronic","HECA"]
[1,"poor","chr1",31381203,31381203,"G","A","intronic","HECA"]
[1,"poor","chr1",31387471,31387491,"CTCTCTCTCTCTCTCATTCTG","C","intergenic","HECA;TXLNB",null,"dist=3783;dist=29691"]
[1,"poor","chr1",31423341,31423341,"C","G","intronic","TXLNB"]
[1,"poor","chr1",31574036,31574036,"G","C","ncRNA_intronic","LOC102156887"]
[1,"poor","chr1",31711378,31711378,"A","G","intergenic","LOC106558606;LOC111090654",null,"dist=55753;dist=372997"]
[1,"poor","chr1",32030241,32030243,"AGG","A","intergenic","LOC106558606;LOC111090654",null,"dist=374616;dist=54132"]
[1,"poor","chr1",32030245,32030245,"T","TCC","intergenic","LOC106558606;LOC111090654",null,"dist=374620;dist=54130"]
[1,"poor","chr1",32142591,32142591,"C","CCTACA","intergenic","LOC111090654;LOC106558612",null,"dist=49966;dist=447248"]
[1,"poor","chr1",32232895,32232895,"A","G","intergenic","LOC111090654;LOC106558612",null,"dist=140270;dist=356944"]
[1,"poor","chr1",32232916,32232916,"T","G","intergenic","LOC111090654;LOC106558612",null,"dist=140291;dist=356923"]
[1,"poor","chr1",32253299,32253299,"C","A","intergenic","LOC111090654;LOC106558612",null,"dist=160674;dist=336540"]
[1,"poor","chr1",32465088,32465088,"G","A","intergenic","LOC111090654;LOC106558612",null,"dist=372463;dist=124751"]
[1,"poor","chr1",32468493,32468493,"T","C","intergenic","LOC111090654;LOC106558612",null,"dist=375868;dist=121346"]
[1,"poor","chr1",32814451,32814451,"C","T","intergenic","LOC102157010;LOC102157053",null,"dist=195612;dist=351082"]
[1,"poor","chr1",32814454,32814454,"A","G","intergenic","LOC102157010;LOC102157053",null,"dist=195615;dist=351079"]
[1,"poor","chr1",32833845,32833845,"C","T","intergenic","LOC102157010;LOC102157053",null,"dist=215006;dist=331688"]
[1,"poor","chr1",33485639,33485639,"A","T","intergenic","LOC102157053;NMBR",null,"dist=216194;dist=287048"]
[1,"poor","chr1",33665001,33665001,"T","A","intergenic","LOC102157053;NMBR",null,"dist=395556;dist=107686"]
[1,"poor","chr1",33666372,33666372,"T","C","intergenic","LOC102157053;NMBR",null,"dist=396927;dist=106315"]
[1,"poor","chr1",33729470,33729470,"T","C","intergenic","LOC102157053;NMBR",null,"dist=460025;dist=43217"]
[1,"poor","chr1",34129081,34129081,"C","CTAGTTTGGCCCATGGGT","intergenic","ADGRG6;HIVEP2",null,"dist=22131;dist=238374"]
[1,"poor","chr1",34173374,34173374,"A","G","intergenic","ADGRG6;HIVEP2",null,"dist=66424;dist=194081"]
[1,"poor","chr1",34173383,34173383,"C","T","intergenic","ADGRG6;HIVEP2",null,"dist=66433;dist=194072"]
[1,"poor","chr1",34309765,34309765,"A","T","intergenic","ADGRG6;HIVEP2",null,"dist=202815;dist=57690"]
[1,"poor","chr1",34321666,34321666,"C","CAAGA","intergenic","ADGRG6;HIVEP2",null,"dist=214716;dist=45789"]
[1,"poor","chr1",34321669,34321669,"G","A","intergenic","ADGRG6;HIVEP2",null,"dist=214719;dist=45786"]
[1,"poor","chr1",34437742,34437742,"T","TA","intronic","HIVEP2"]
[1,"poor","chr1",34437750,34437751,"GT","G","intronic","HIVEP2"]
[1,"poor","chr1",34468872,34468872,"A","C","intronic","HIVEP2"]
[1,"poor","chr1",34468875,34468875,"A","G","intronic","HIVEP2"]
[1,"poor","chr1",34614764,34614764,"G","C","intergenic","LOC111090656;LOC111095528",null,"dist=16654;dist=21019"]
[1,"poor","chr1",34654489,34654489,"G","C","intronic","AIG1"]
[1,"poor","chr1",34654498,34654498,"A","G","intronic","AIG1"]
[1,"poor","chr1",34656000,34656000,"C","CAT","intronic","AIG1"]
[1,"poor","chr1",34724527,34724527,"A","T","intronic","AIG1"]
[1,"poor","chr1",34724533,34724548,"TCCCTGGGTCAGAAGA","T","intronic","AIG1"]
[1,"poor","chr1",34781888,34781888,"A","G","intronic","AIG1"]
[1,"poor","chr1",34894164,34894164,"C","G","intergenic","AIG1;LOC111090660",null,"dist=9719;dist=2710"]
[1,"poor","chr1",34931888,34931888,"C","T","intergenic","LOC111090660;ADAT2",null,"dist=27425;dist=34772"]
[1,"poor","chr1",34947702,34947702,"C","A","intergenic","LOC111090660;ADAT2",null,"dist=43239;dist=18958"]
[1,"poor","chr1",34987621,34987621,"C","T","intronic","ADAT2"]
[1,"poor","chr1",34987622,34987622,"A","G","intronic","ADAT2"]
[1,"poor","chr1",35011190,35011190,"C","T","intronic","PEX3"]
[1,"poor","chr1",35011201,35011201,"A","T","intronic","PEX3"]
[1,"poor","chr1",35203852,35203852,"G","A","ncRNA_intronic","LOC111095548"]
[1,"poor","chr1",35221028,35221028,"C","CCCGCGCGGCGGGGGCG","ncRNA_intronic","LOC111095548"]
[1,"poor","chr1",35221033,35221033,"G","GTGCGCCCCGGACTCA","ncRNA_intronic","LOC111095548"]
[1,"poor","chr1",35336744,35336744,"C","A","intronic","PHACTR2"]
[1,"poor","chr1",35372238,35372238,"A","ACC","intronic","LTV1"]
[1,"poor","chr1",35372241,35372243,"TGG","T","intronic","LTV1"]
[1,"poor","chr1",35406797,35406797,"A","T","intronic","ZC2HC1B"]
[1,"poor","chr1",35510854,35510854,"G","A","intronic","PLAGL1"]
[1,"poor","chr1",35576936,35576936,"G","A","intergenic","SF3B5;STX11",null,"dist=17938;dist=33091"]
[1,"poor","chr1",35633933,35633933,"T","C","intronic","STX11"]
[1,"poor","chr1",35762146,35762146,"A","G","intronic","UTRN"]
[1,"poor","chr1",35762147,35762147,"C","T","intronic","UTRN"]
[1,"poor","chr1",35790503,35790503,"A","G","intronic","UTRN"]
[1,"poor","chr1",35939315,35939315,"T","C","intronic","UTRN"]
[1,"poor","chr1",35965626,35965627,"GA","G","intronic","UTRN"]
[1,"poor","chr1",35965629,35965629,"C","CT","intronic","UTRN"]
[1,"poor","chr1",35980071,35980071,"G","A","intronic","UTRN"]
[1,"poor","chr1",35980072,35980072,"T","C","intronic","UTRN"]
[1,"poor","chr1",36080477,36080477,"G","A","intronic","UTRN"]
[1,"poor","chr1",36136402,36136402,"G","A","exonic","UTRN","NA",null,"synonymous SNV","UTRN:XM_005615256.3:exon6:c.G957A:p.L319L,UTRN:XM_022417730.1:exon6:c.G864A:p.L288L,UTRN:XM_022417763.1:exon6:c.G864A:p.L288L,UTRN:NM_001012395.1:exon55:c.G8292A:p.L2764L,UTRN:XM_005615249.3:exon55:c.G8307A:p.L2769L,UTRN:XM_005615252.3:exon55:c.G8307A:p.L2769L,UTRN:XM_005615254.3:exon55:c.G8307A:p.L2769L,UTRN:XM_005615250.3:exon56:c.G8292A:p.L2764L,UTRN:XM_005615251.3:exon56:c.G8292A:p.L2764L,UTRN:XM_022417687.1:exon56:c.G8292A:p.L2764L"]
[1,"poor","chr1",36139695,36139695,"A","C","intronic","UTRN"]
[1,"poor","chr1",36139805,36139805,"G","A","intronic","UTRN"]
[1,"poor","chr1",36139814,36139814,"C","T","intronic","UTRN"]
[1,"poor","chr1",36258183,36258183,"C","T","intergenic","UTRN;LOC106558639",null,"dist=32650;dist=427625"]
[1,"poor","chr1",36388076,36388076,"T","A","intergenic","UTRN;LOC106558639",null,"dist=162543;dist=297732"]
[1,"poor","chr1",36388082,36388086,"CTGGA","C","intergenic","UTRN;LOC106558639",null,"dist=162549;dist=297722"]
[1,"poor","chr1",36435498,36435498,"G","A","intergenic","UTRN;LOC106558639",null,"dist=209965;dist=250310"]
[1,"poor","chr1",36435520,36435520,"G","C","intergenic","UTRN;LOC106558639",null,"dist=209987;dist=250288"]
[1,"poor","chr1",36503433,36503433,"T","C","intergenic","UTRN;LOC106558639",null,"dist=277900;dist=182375"]
[1,"poor","chr1",36503465,36503465,"A","G","intergenic","UTRN;LOC106558639",null,"dist=277932;dist=182343"]
[1,"poor","chr1",36528218,36528218,"C","CT","intergenic","UTRN;LOC106558639",null,"dist=302685;dist=157590"]
[1,"poor","chr1",36637079,36637079,"T","C","intergenic","UTRN;LOC106558639",null,"dist=411546;dist=48729"]
[1,"poor","chr1",36744476,36744476,"G","A","ncRNA_intronic","LOC106558639"]
[1,"poor","chr1",36744478,36744478,"G","GCA","ncRNA_intronic","LOC106558639"]
[1,"poor","chr1",36872288,36872288,"C","G","intronic","EPM2A"]
[1,"poor","chr1",36872294,36872294,"G","GCAGCTAAGAGAC","intronic","EPM2A"]
[1,"poor","chr1",36891936,36891936,"A","T","intronic","EPM2A"]
[1,"poor","chr1",36911096,36911096,"T","TG","intronic","EPM2A"]
[1,"poor","chr1",36911099,36911100,"TC","T","intronic","EPM2A"]
[1,"poor","chr1",37069149,37069149,"A","ATCCTGCATGAAGCCAAGGACCCCCTTGGCTGG","intergenic","FBXO30;SHPRH",null,"dist=43585;dist=7169"]
[1,"poor","chr1",37100233,37100235,"CAG","C","intronic","SHPRH"]
[1,"poor","chr1",37100237,37100237,"A","ACT","intronic","SHPRH"]
[1,"poor","chr1",37182122,37182122,"C","CA","intergenic","LOC111095614;GRM1",null,"dist=7964;dist=23695"]
[1,"poor","chr1",37182124,37182125,"GT","G","intergenic","LOC111095614;GRM1",null,"dist=7966;dist=23692"]
[1,"poor","chr1",37192558,37192558,"T","TC","intergenic","LOC111095614;GRM1",null,"dist=18400;dist=13259"]
[1,"poor","chr1",37192559,37192559,"T","TTCTC","intergenic","LOC111095614;GRM1",null,"dist=18401;dist=13258"]
[1,"poor","chr1",37254180,37254180,"G","T","intronic","GRM1"]
[1,"poor","chr1",37254181,37254181,"A","C","intronic","GRM1"]
[1,"poor","chr1",37357179,37357179,"T","TG","intronic","GRM1"]
[1,"poor","chr1",37357181,37357182,"TC","T","intronic","GRM1"]
[1,"poor","chr1",37391221,37391221,"C","A","intronic","GRM1"]
[1,"poor","chr1",37391226,37391226,"T","G","intronic","GRM1"]
[1,"poor","chr1",37556189,37556194,"CCTGAT","C","intronic","GRM1"]
[1,"poor","chr1",37556199,37556199,"G","GGATCA","intronic","GRM1"]
[1,"poor","chr1",37566667,37566667,"C","A","intronic","GRM1"]
[1,"poor","chr1",37566668,37566668,"T","G","intronic","GRM1"]
[1,"poor","chr1",37597018,37597018,"C","G","intronic","GRM1"]
[1,"poor","chr1",37687925,37687925,"C","G","ncRNA_intronic","LOC111095623"]
[1,"poor","chr1",37821714,37821714,"G","A","intronic","ADGB"]
[1,"poor","chr1",37821715,37821715,"T","C","intronic","ADGB"]
[1,"poor","chr1",37895131,37895131,"C","T","intronic","ADGB"]
[1,"poor","chr1",38136919,38136919,"C","A","intergenic","ADGB;STXBP5",null,"dist=222331;dist=134319"]
[1,"poor","chr1",38213277,38213281,"CTGTG","C","intergenic","ADGB;STXBP5",null,"dist=298689;dist=57957"]
[1,"poor","chr1",38298297,38298297,"G","A","intronic","STXBP5"]
[1,"poor","chr1",38304943,38304943,"A","G","intronic","STXBP5"]
[1,"poor","chr1",38353678,38353678,"C","CCACTTA","intronic","STXBP5"]
[1,"poor","chr1",38577357,38577357,"G","C","intergenic","LOC100688424;LOC111095675",null,"dist=71726;dist=83903"]
[1,"poor","chr1",38605836,38605836,"C","T","intergenic","LOC100688424;LOC111095675",null,"dist=100205;dist=55424"]
[1,"poor","chr1",38739004,38739004,"C","G","intergenic","LOC111095675;LOC111095681",null,"dist=51335;dist=57565"]
[1,"poor","chr1",38749496,38749496,"A","T","intergenic","LOC111095675;LOC111095681",null,"dist=61827;dist=47073"]
[1,"poor","chr1",38755129,38755129,"G","C","intergenic","LOC111095675;LOC111095681",null,"dist=67460;dist=41440"]
[1,"poor","chr1",38814066,38814066,"A","G","ncRNA_intronic","LOC111095681"]
[1,"poor","chr1",38905424,38905424,"T","C","ncRNA_intronic","LOC111095681"]
[1,"poor","chr1",38911445,38911445,"A","G","ncRNA_intronic","LOC111095681"]
[1,"poor","chr1",38930640,38930640,"A","G","intergenic","LOC111095681;SASH1",null,"dist=3333;dist=290603"]
[1,"poor","chr1",38952163,38952165,"TTA","T","intergenic","LOC111095681;SASH1",null,"dist=24856;dist=269078"]
[1,"poor","chr1",38952169,38952169,"G","GTA","intergenic","LOC111095681;SASH1",null,"dist=24862;dist=269074"]
[1,"poor","chr1",39045850,39045850,"G","A","intergenic","LOC111095681;SASH1",null,"dist=118543;dist=175393"]
[1,"poor","chr1",39045853,39045853,"T","C","intergenic","LOC111095681;SASH1",null,"dist=118546;dist=175390"]
[1,"poor","chr1",39093654,39093654,"C","CCCACAAGGAGCCCG","intergenic","LOC111095681;SASH1",null,"dist=166347;dist=127589"]
[1,"poor","chr1",39093655,39093655,"T","A","intergenic","LOC111095681;SASH1",null,"dist=166348;dist=127588"]
[1,"poor","chr1",39189586,39189601,"TCACTTCCCACCTCAA","T","intergenic","LOC111095681;SASH1",null,"dist=262279;dist=31642"]
[1,"poor","chr1",39267893,39267893,"G","GGATCAA","intronic","SASH1"]
[1,"poor","chr1",39309070,39309070,"C","CAAAGGTTTTAGAAAAAACCTTTGAA","intronic","SASH1"]
[1,"poor","chr1",39346864,39346864,"C","T","intronic","SASH1"]
[1,"poor","chr1",39346868,39346868,"G","A","intronic","SASH1"]
[1,"poor","chr1",39377879,39377879,"A","T","intronic","SASH1"]
[1,"poor","chr1",39377886,39377886,"C","CTT","intronic","SASH1"]
[1,"poor","chr1",39573024,39573026,"GTC","G","intergenic","LOC102155455;UST",null,"dist=2577;dist=60250"]
[1,"poor","chr1",39589269,39589269,"T","A","intergenic","LOC102155455;UST",null,"dist=18822;dist=44007"]
[1,"poor","chr1",39680178,39680180,"GCA","G","intronic","UST"]
[1,"poor","chr1",39680182,39680182,"C","CTG","intronic","UST"]
[1,"poor","chr1",39790091,39790091,"G","GT","intronic","UST"]
[1,"poor","chr1",39790092,39790092,"G","GCTGATGGCCTCCAAC","intronic","UST"]
[1,"poor","chr1",40182869,40182869,"A","G","intronic","TAB2"]
[1,"poor","chr1",40343472,40343472,"G","A","intergenic","PPIL4;GINM1",null,"dist=1356;dist=5853"]
[1,"poor","chr1",40343479,40343479,"G","A","intergenic","PPIL4;GINM1",null,"dist=1363;dist=5846"]
[1,"poor","chr1",40360044,40360044,"A","T","intronic","GINM1"]
[1,"poor","chr1",40360078,40360079,"GT","G","intronic","GINM1"]
[1,"poor","chr1",40417984,40417984,"T","TG","intronic","KATNA1"]
[1,"poor","chr1",40437576,40437576,"C","A","intronic","LATS1"]
[1,"poor","chr1",40437581,40437581,"T","G","intronic","LATS1"]
[1,"poor","chr1",40537132,40537132,"A","G","intronic","PCMT1"]
[1,"poor","chr1",40633752,40633752,"C","T","intergenic","LOC111090672;LOC100683099",null,"dist=11657;dist=1864"]
[1,"poor","chr1",40677991,40677991,"C","G","intergenic","LOC100683099;LOC106559630",null,"dist=38126;dist=9070"]
[1,"poor","chr1",40748847,40748847,"G","A","intronic","PPP1R14C"]
[1,"poor","chr1",40928360,40928360,"C","T","intergenic","IYD;LOC111095760",null,"dist=19923;dist=58859"]
[1,"poor","chr1",40960447,40960447,"A","T","intergenic","IYD;LOC111095760",null,"dist=52010;dist=26772"]
[1,"poor","chr1",41006571,41006571,"T","G","intergenic","LOC111095760;PLEKHG1",null,"dist=9270;dist=67177"]
[1,"poor","chr1",41059939,41059939,"A","T","intergenic","LOC111095760;PLEKHG1",null,"dist=62638;dist=13809"]
[1,"poor","chr1",41059942,41059942,"A","T","intergenic","LOC111095760;PLEKHG1",null,"dist=62641;dist=13806"]
[1,"poor","chr1",41181248,41181250,"ATT","A","intronic","PLEKHG1"]
[1,"poor","chr1",41181252,41181254,"ATG","A","intronic","PLEKHG1"]
[1,"poor","chr1",41228948,41228948,"C","T","intronic","PLEKHG1"]
[1,"poor","chr1",41228951,41228951,"T","A","intronic","PLEKHG1"]
[1,"poor","chr1",41318395,41318395,"C","CCTTGTG","intronic","MTHFD1L"]
[1,"poor","chr1",41318397,41318403,"TCACAAG","T","intronic","MTHFD1L"]
[1,"poor","chr1",41439246,41439246,"T","C","intronic","MTHFD1L"]
[1,"poor","chr1",41473446,41473460,"TCTCTCTCTCTCTCA","T","ncRNA_intronic","LOC111095761"]
[1,"poor","chr1",41663127,41663127,"G","T","intronic","AKAP12"]
[1,"poor","chr1",41701236,41701239,"TGTC","T","intronic","AKAP12"]
[1,"poor","chr1",41798901,41798905,"TAAAA","T","intronic","RMND1"]
[1,"poor","chr1",41874740,41874740,"C","G","intronic","CCDC170"]
[1,"poor","chr1",41935355,41935360,"GTGGTT","G","intergenic","CCDC170;ESR1",null,"dist=3069;dist=146592"]
[1,"poor","chr1",42003740,42003740,"C","T","intergenic","CCDC170;ESR1",null,"dist=71454;dist=78212"]
[1,"poor","chr1",42041588,42041588,"G","T","intergenic","CCDC170;ESR1",null,"dist=109302;dist=40364"]
[1,"poor","chr1",42041597,42041597,"C","G","intergenic","CCDC170;ESR1",null,"dist=109311;dist=40355"]
[1,"poor","chr1",42069603,42069603,"T","A","intergenic","CCDC170;ESR1",null,"dist=137317;dist=12349"]
[1,"poor","chr1",42167209,42167209,"G","C","intronic","ESR1"]
[1,"poor","chr1",42229759,42229759,"T","C","intronic","ESR1"]
[1,"poor","chr1",42358583,42358583,"G","A","intronic","ESR1"]
[1,"poor","chr1",42457269,42457269,"T","TTCATTCAGGATGAACCTCTCCCGAGGCTCATCCTGAATGAATTC","intronic","SYNE1"]
[1,"poor","chr1",42641413,42641416,"AAAT","A","intronic","SYNE1"]
[1,"poor","chr1",42641418,42641418,"G","GATT","intronic","SYNE1"]
[1,"poor","chr1",42701338,42701338,"C","G","intronic","SYNE1"]
[1,"poor","chr1",42723222,42723222,"A","G","intronic","SYNE1"]
[1,"poor","chr1",42723226,42723226,"A","C","intronic","SYNE1"]
[1,"poor","chr1",42883458,42883458,"T","A","intergenic","SYNE1;MYCT1",null,"dist=52229;dist=3539"]
[1,"poor","chr1",42883468,42883468,"T","TGG","intergenic","SYNE1;MYCT1",null,"dist=52239;dist=3529"]
[1,"poor","chr1",42909512,42909512,"G","A","downstream","MYCT1",null,"dist=699"]
[1,"poor","chr1",42938701,42938701,"T","C","intergenic","LOC111095766;VIP",null,"dist=21689;dist=2954"]
[1,"poor","chr1",43028826,43028826,"A","T","ncRNA_intronic","LOC111090675"]
[1,"poor","chr1",43028831,43028831,"A","T","ncRNA_intronic","LOC111090675"]
[1,"poor","chr1",43285340,43285340,"T","A","intergenic","RGS17;LOC111090676",null,"dist=21063;dist=199369"]
[1,"poor","chr1",43343191,43343193,"TCC","T","intergenic","RGS17;LOC111090676",null,"dist=78914;dist=141516"]
[1,"poor","chr1",43374043,43374043,"T","C","intergenic","RGS17;LOC111090676",null,"dist=109766;dist=110666"]
[1,"poor","chr1",43634210,43634210,"G","A","intergenic","LOC111090676;OPRM1",null,"dist=113256;dist=338705"]
[1,"poor","chr1",43635686,43635686,"T","TGACACAGGTGCCCAACTAGCTGTGCCACACA","intergenic","LOC111090676;OPRM1",null,"dist=114732;dist=337229"]
[1,"poor","chr1",43742026,43742026,"A","G","intergenic","LOC111090676;OPRM1",null,"dist=221072;dist=230889"]
[1,"poor","chr1",44056757,44056757,"A","G","intergenic","OPRM1;IPCEF1",null,"dist=19280;dist=9641"]
[1,"poor","chr1",44096108,44096108,"G","T","intronic","IPCEF1"]
[1,"poor","chr1",44206726,44206731,"AAGGAG","A","intergenic","IPCEF1;CNKSR3",null,"dist=42553;dist=73401"]
[1,"poor","chr1",44206734,44206734,"T","TTCTCC","intergenic","IPCEF1;CNKSR3",null,"dist=42561;dist=73398"]
[1,"poor","chr1",44299825,44299825,"A","T","intronic","CNKSR3"]
[1,"poor","chr1",44322989,44322989,"A","G","intronic","CNKSR3"]
[1,"poor","chr1",44322994,44322994,"C","T","intronic","CNKSR3"]
[1,"poor","chr1",44400859,44400859,"C","CCCTGGACAGGAGGA","intergenic","CNKSR3;MIR8873B",null,"dist=39721;dist=44120"]
[1,"poor","chr1",44401278,44401280,"GAA","G","intergenic","CNKSR3;MIR8873B",null,"dist=40140;dist=43699"]
[1,"poor","chr1",44401281,44401281,"G","A","intergenic","CNKSR3;MIR8873B",null,"dist=40143;dist=43698"]
[1,"poor","chr1",44448603,44448603,"C","T","intergenic","MIR8873B;LOC111095813",null,"dist=3480;dist=21649"]
[1,"poor","chr1",44448604,44448604,"T","C","intergenic","MIR8873B;LOC111095813",null,"dist=3481;dist=21648"]
[1,"poor","chr1",44467403,44467403,"T","C","intergenic","MIR8873B;LOC111095813",null,"dist=22280;dist=2849"]
[1,"poor","chr1",44494185,44494185,"A","ACC","intergenic","LOC111095813;SCAF8",null,"dist=1888;dist=68405"]
[1,"poor","chr1",44494187,44494187,"C","CAGATTCTGTAAGAAG","intergenic","LOC111095813;SCAF8",null,"dist=1890;dist=68403"]
[1,"poor","chr1",44514528,44514528,"C","T","intergenic","LOC111095813;SCAF8",null,"dist=22231;dist=48062"]
[1,"poor","chr1",44710365,44710365,"A","T","intergenic","SCAF8;LOC111095842",null,"dist=6382;dist=168809"]
[1,"poor","chr1",44717961,44717961,"A","T","intergenic","SCAF8;LOC111095842",null,"dist=13978;dist=161213"]
[1,"poor","chr1",44804909,44804909,"C","CTGTGTT","intergenic","SCAF8;LOC111095842",null,"dist=100926;dist=74265"]
[1,"poor","chr1",44824214,44824214,"A","T","intergenic","SCAF8;LOC111095842",null,"dist=120231;dist=54960"]
[1,"poor","chr1",44861913,44861913,"C","T","intergenic","SCAF8;LOC111095842",null,"dist=157930;dist=17261"]
[1,"poor","chr1",44871130,44871130,"A","G","intergenic","SCAF8;LOC111095842",null,"dist=167147;dist=8044"]
[1,"poor","chr1",44930482,44930482,"G","C","intronic","TIAM2"]
[1,"poor","chr1",45104596,45104596,"A","C","intergenic","TFB1M;NOX3",null,"dist=33235;dist=24516"]
[1,"poor","chr1",45112330,45112331,"AG","A","intergenic","TFB1M;NOX3",null,"dist=40969;dist=16781"]
[1,"poor","chr1",45112333,45112333,"T","A","intergenic","TFB1M;NOX3",null,"dist=40972;dist=16779"]
[1,"poor","chr1",45305040,45305040,"C","G","intergenic","LOC102153338;LOC111090678",null,"dist=52047;dist=379636"]
[1,"poor","chr1",45305041,45305041,"C","G","intergenic","LOC102153338;LOC111090678",null,"dist=52048;dist=379635"]
[1,"poor","chr1",45655929,45655929,"A","G","intergenic","LOC102153338;LOC111090678",null,"dist=402936;dist=28747"]
[1,"poor","chr1",45798453,45798453,"T","A","intergenic","LOC111090678;LOC111095850",null,"dist=105379;dist=517999"]
[1,"poor","chr1",45798454,45798454,"T","A","intergenic","LOC111090678;LOC111095850",null,"dist=105380;dist=517998"]
[1,"poor","chr1",45823100,45823100,"T","C","intergenic","LOC111090678;LOC111095850",null,"dist=130026;dist=493352"]
[1,"poor","chr1",45913088,45913089,"GT","G","intergenic","LOC111090678;LOC111095850",null,"dist=220014;dist=403363"]
[1,"poor","chr1",45913092,45913092,"T","TA","intergenic","LOC111090678;LOC111095850",null,"dist=220018;dist=403360"]
[1,"poor","chr1",46043252,46043252,"T","C","intergenic","LOC111090678;LOC111095850",null,"dist=350178;dist=273200"]
[1,"poor","chr1",46066129,46066129,"C","A","intergenic","LOC111090678;LOC111095850",null,"dist=373055;dist=250323"]
[1,"poor","chr1",46184259,46184259,"C","T","intergenic","LOC111090678;LOC111095850",null,"dist=491185;dist=132193"]
[1,"poor","chr1",46234470,46234470,"A","AC","intergenic","LOC111090678;LOC111095850",null,"dist=541396;dist=81982"]
[1,"poor","chr1",46360849,46360851,"AGG","A","intergenic","LOC111095850;ARID1B",null,"dist=12104;dist=9770"]
[1,"poor","chr1",46479731,46479731,"G","T","intronic","ARID1B"]
[1,"poor","chr1",46482400,46482400,"T","C","intronic","ARID1B"]
[1,"poor","chr1",46578206,46578206,"T","A","intronic","ARID1B"]
[1,"poor","chr1",46578207,46578207,"T","A","intronic","ARID1B"]
[1,"poor","chr1",46836044,46836044,"C","T","ncRNA_exonic","LOC102153553"]
[1,"poor","chr1",46896125,46896125,"A","C","intronic","TMEM242"]
[1,"poor","chr1",46896130,46896130,"G","T","intronic","TMEM242"]
[1,"poor","chr1",46979027,46979027,"A","T","intronic","ZDHHC14"]
[1,"poor","chr1",47023823,47023823,"G","T","intronic","ZDHHC14"]
[1,"poor","chr1",47089574,47089574,"G","C","intronic","ZDHHC14"]
[1,"poor","chr1",47089575,47089575,"G","C","intronic","ZDHHC14"]
[1,"poor","chr1",47095420,47095420,"A","AC","intronic","ZDHHC14"]
[1,"poor","chr1",47150742,47150742,"T","A","intronic","ZDHHC14"]
[1,"poor","chr1",47252639,47252639,"G","C","intergenic","ZDHHC14;SNX9",null,"dist=31732;dist=93575"]
[1,"poor","chr1",47316455,47316455,"A","T","intergenic","ZDHHC14;SNX9",null,"dist=95548;dist=29759"]
[1,"poor","chr1",47358743,47358743,"T","TAGGACAGCACTGCCA","intronic","SNX9"]
[1,"poor","chr1",47367667,47367667,"C","A","intronic","SNX9"]
[1,"poor","chr1",47367668,47367668,"T","G","intronic","SNX9"]
[1,"poor","chr1",47506242,47506242,"T","TTATCTCAA","upstream","SYNJ2",null,"dist=683"]
[1,"poor","chr1",47506244,47506244,"C","A","upstream","SYNJ2",null,"dist=681"]
[1,"poor","chr1",47517838,47517838,"G","C","intronic","SYNJ2"]
[1,"poor","chr1",47555811,47555811,"G","C","intronic","SYNJ2"]
[1,"poor","chr1",47564007,47564007,"C","T","intronic","SYNJ2"]
[1,"poor","chr1",47564008,47564008,"A","G","intronic","SYNJ2"]
[1,"poor","chr1",47785084,47785084,"G","GTTTCTTTC","intronic","TULP4"]
[1,"poor","chr1",47859215,47859215,"C","G","intronic","TULP4"]
[1,"poor","chr1",47861213,47861213,"C","T","intronic","TULP4"]
[1,"poor","chr1",47861216,47861216,"A","G","intronic","TULP4"]
[1,"poor","chr1",47938850,47938850,"T","A","intronic","TULP4"]
[1,"poor","chr1",47938858,47938858,"G","T","intronic","TULP4"]
[1,"poor","chr1",47966066,47966066,"T","A","intergenic","LOC111095871;TMEM181",null,"dist=1686;dist=3181"]
[1,"poor","chr1",47966075,47966075,"A","ATC","intergenic","LOC111095871;TMEM181",null,"dist=1695;dist=3172"]
[1,"poor","chr1",47989152,47989152,"G","A","intronic","TMEM181"]
[1,"poor","chr1",48017833,48017833,"C","G","intronic","TMEM181"]
[1,"poor","chr1",48106661,48106661,"A","G","intronic","SYTL3"]
[1,"poor","chr1",48202249,48202249,"T","G","intronic","EZR"]
[1,"poor","chr1",48226656,48226656,"A","G","downstream","LOC102155395",null,"dist=486"]
[1,"poor","chr1",48400024,48400024,"A","G","intronic","LOC111095876"]
[1,"poor","chr1",48442626,48442626,"G","C","intergenic","LOC111095876;LOC111095881",null,"dist=34036;dist=28354"]
[1,"poor","chr1",48547068,48547068,"C","CCAAGG","ncRNA_exonic","LOC111095882"]
[1,"poor","chr1",48547069,48547069,"T","TCCAGTGTCC","ncRNA_exonic","LOC111095882"]
[1,"poor","chr1",48548187,48548187,"T","C","ncRNA_exonic","LOC111095882"]
[1,"poor","chr1",48548205,48548205,"C","A","ncRNA_exonic","LOC111095882"]
[1,"poor","chr1",48608659,48608659,"A","AGGCAGGTAGGAATGGCCTGCAG","intergenic","FNDC1;SOD2",null,"dist=5697;dist=334813"]
[1,"poor","chr1",48672198,48672198,"T","C","intergenic","FNDC1;SOD2",null,"dist=69236;dist=271274"]
[1,"poor","chr1",48699458,48699458,"G","A","intergenic","FNDC1;SOD2",null,"dist=96496;dist=244014"]
[1,"poor","chr1",48781952,48781952,"A","G","intergenic","FNDC1;SOD2",null,"dist=178990;dist=161520"]
[1,"poor","chr1",48889043,48889044,"GA","G","intergenic","FNDC1;SOD2",null,"dist=286081;dist=54428"]
[1,"poor","chr1",48896064,48896066,"CAT","C","intergenic","FNDC1;SOD2",null,"dist=293102;dist=47406"]
[1,"poor","chr1",48896068,48896068,"A","AAT","intergenic","FNDC1;SOD2",null,"dist=293106;dist=47404"]
[1,"poor","chr1",48993541,48993541,"G","A","intronic","WTAP"]
[1,"poor","chr1",48993547,48993547,"G","GGC","intronic","WTAP"]
[1,"poor","chr1",49047157,49047157,"G","A","intronic","PNLDC1"]
[1,"poor","chr1",49171313,49171313,"C","CCCAGCCAGAGCACCTGA","intronic","IGF2R"]
[1,"poor","chr1",49248635,49248635,"C","T","intronic","IGF2R"]
[1,"poor","chr1",49248646,49248646,"T","C","intronic","IGF2R"]
[1,"poor","chr1",49250663,49250664,"AC","A","intronic","IGF2R"]
[1,"poor","chr1",49250666,49250666,"A","AG","intronic","IGF2R"]
[1,"poor","chr1",49268567,49268567,"G","T","upstream","SLC22A1",null,"dist=411"]
[1,"poor","chr1",49268569,49268569,"G","A","upstream","SLC22A1",null,"dist=409"]
[1,"poor","chr1",49306536,49306536,"C","CCAGGGGACCCCTGGCTAT","intergenic","SLC22A1;LOC111097993",null,"dist=10014;dist=1918"]
[1,"poor","chr1",49322461,49322463,"AGC","A","exonic","LOC111097993",null,null,"frameshift substitution","LOC111097993:XM_022425171.1:exon2:c.883_885delinsA:p.S295Kfs*4"]
[1,"poor","chr1",49322464,49322591,"AGCAGCAATAGTAATGGCAGCAACAACAGCAGCAACAATAGTAACAGTGACAACAGCAGCAGCAACAAGAGTGACAATGGCAATATTAGCAGCAACAACAGTAACCACCACAACAATGGGAACCACAG","A","exonic","LOC111097993",null,null,"frameshift substitution","LOC111097993:XM_022425171.1:exon2:c.886_1013delinsA:p.S296Kfs*161"]
[1,"poor","chr1",49325701,49325701,"G","T","downstream","LOC111097993",null,"dist=273"]
[1,"poor","chr1",49415484,49415484,"T","TA","intronic","SLC22A3"]
[1,"poor","chr1",49415490,49415491,"CT","C","intronic","SLC22A3"]
[1,"poor","chr1",49425572,49425572,"T","A","intronic","SLC22A3"]
[1,"poor","chr1",49519129,49519129,"C","G","intronic","PLG"]
[1,"poor","chr1",49532183,49532183,"G","A","intronic","PLG"]
[1,"poor","chr1",49571016,49571016,"G","GA","intergenic","PLG;LOC111095918",null,"dist=35756;dist=14130"]
[1,"poor","chr1",49571018,49571018,"C","CAAGCCCCATGTTGGG","intergenic","PLG;LOC111095918",null,"dist=35758;dist=14128"]
[1,"poor","chr1",49700392,49700392,"C","CCTGT","intronic","MAP3K4"]
[1,"poor","chr1",49700394,49700398,"TACAG","T","intronic","MAP3K4"]
[1,"poor","chr1",49741232,49741232,"A","T","exonic","AGPAT4","DELETERIOUS",null,"nonsynonymous SNV","AGPAT4:XM_022418699.1:exon2:c.T95A:p.L32Q,AGPAT4:XM_005615562.3:exon3:c.T281A:p.L94Q,AGPAT4:XM_005615563.3:exon3:c.T281A:p.L94Q,AGPAT4:XM_850050.5:exon3:c.T281A:p.L94Q"]
[1,"poor","chr1",49741241,49741241,"A","AGTTTGAGATTGAC","exonic","AGPAT4","NA",null,"frameshift substitution","AGPAT4:XM_022418699.1:exon2:c.86delinsGTCAATCTCAAACT:p.I29Sfs*13,AGPAT4:XM_005615562.3:exon3:c.272delinsGTCAATCTCAAACT:p.I91Sfs*13,AGPAT4:XM_005615563.3:exon3:c.272delinsGTCAATCTCAAACT:p.I91Sfs*13,AGPAT4:XM_850050.5:exon3:c.272delinsGTCAATCTCAAACT:p.I91Sfs*13"]
[1,"poor","chr1",49829011,49829011,"G","T","intronic","AGPAT4"]
[1,"poor","chr1",49829012,49829012,"A","C","intronic","AGPAT4"]
[1,"poor","chr1",49937322,49937322,"A","G","intronic","PRKN"]
[1,"poor","chr1",49963848,49963848,"G","A","intronic","PRKN"]
[1,"poor","chr1",49963855,49963855,"A","G","intronic","PRKN"]
[1,"poor","chr1",49978997,49978997,"G","A","intronic","PRKN"]
[1,"poor","chr1",50108747,50108747,"T","C","intronic","PRKN"]
[1,"poor","chr1",50154011,50154011,"A","G","intronic","PRKN"]
[1,"poor","chr1",50158636,50158636,"G","A","intronic","PRKN"]
[1,"poor","chr1",50158637,50158637,"T","C","intronic","PRKN"]
[1,"poor","chr1",50243723,50243723,"A","G","intronic","PRKN"]
[1,"poor","chr1",50243735,50243736,"CA","C","intronic","PRKN"]
[1,"poor","chr1",50402952,50402952,"G","T","intronic","PRKN"]
[1,"poor","chr1",50402955,50402955,"G","GCAGGACCCCAGCCTATC","intronic","PRKN"]
[1,"poor","chr1",50478615,50478615,"A","G","intronic","PRKN"]
[1,"poor","chr1",50535146,50535146,"G","A","intronic","PRKN"]
[1,"poor","chr1",50552303,50552303,"G","C","intronic","PRKN"]
[1,"poor","chr1",50577168,50577168,"A","C","intronic","PRKN"]
[1,"poor","chr1",50608834,50608834,"T","A","intronic","PRKN"]
[1,"poor","chr1",50712701,50712701,"T","A","intronic","PRKN"]
[1,"poor","chr1",50712715,50712715,"A","ATT","intronic","PRKN"]
[1,"poor","chr1",50864542,50864542,"A","G","intronic","PRKN"]
[1,"poor","chr1",50978043,50978043,"T","C","intronic","PRKN"]
[1,"poor","chr1",50978044,50978044,"C","T","intronic","PRKN"]
[1,"poor","chr1",51136114,51136114,"A","G","intronic","PRKN"]
[1,"poor","chr1",51302163,51302163,"A","G","intronic","PACRG"]
[1,"poor","chr1",51347353,51347353,"C","CATTCAGGGATAACTGCATTCAG","intronic","PACRG"]
[1,"poor","chr1",51383922,51383922,"C","A","intronic","PACRG"]
[1,"poor","chr1",51383927,51383927,"T","G","intronic","PACRG"]
[1,"poor","chr1",51610452,51610452,"T","C","intronic","PACRG"]
[1,"poor","chr1",51610453,51610453,"G","A","intronic","PACRG"]
[1,"poor","chr1",51623745,51623745,"C","T","intronic","PACRG"]
[1,"poor","chr1",51640506,51640506,"T","TCCAAATGACACTGAA","intronic","PACRG"]
[1,"poor","chr1",51640511,51640511,"T","G","intronic","PACRG"]
[1,"poor","chr1",51649479,51649479,"C","A","intronic","PACRG"]
[1,"poor","chr1",51649484,51649484,"T","G","intronic","PACRG"]
[1,"poor","chr1",51683420,51683420,"C","A","intronic","PACRG"]
[1,"poor","chr1",51683432,51683432,"G","A","intronic","PACRG"]
[1,"poor","chr1",51706871,51706871,"G","A","intronic","PACRG"]
[1,"poor","chr1",51706872,51706872,"T","G","intronic","PACRG"]
[1,"poor","chr1",51716438,51716438,"T","C","ncRNA_intronic","LOC111095931"]
[1,"poor","chr1",51928399,51928400,"GC","G","intronic","QKI"]
[1,"poor","chr1",51928402,51928402,"T","TG","intronic","QKI"]
[1,"poor","chr1",52024820,52024820,"T","C","intergenic","QKI;LOC106559668",null,"dist=67929;dist=76776"]
[1,"poor","chr1",52079779,52079779,"G","A","intergenic","QKI;LOC106559668",null,"dist=122888;dist=21817"]
[1,"poor","chr1",52195815,52195815,"T","C","intergenic","LOC106559668;LOC111090691",null,"dist=93349;dist=285087"]
[1,"poor","chr1",52373780,52373780,"A","G","intergenic","LOC106559668;LOC111090691",null,"dist=271314;dist=107122"]
[1,"poor","chr1",52461185,52461185,"C","CGGCTCCTCCCTG","intergenic","LOC106559668;LOC111090691",null,"dist=358719;dist=19717"]
[1,"poor","chr1",52461189,52461189,"T","TGTGGC","intergenic","LOC106559668;LOC111090691",null,"dist=358723;dist=19713"]
[1,"poor","chr1",52538648,52538648,"G","A","intergenic","LOC111090691;LOC111095940",null,"dist=51055;dist=58210"]
[1,"poor","chr1",52538655,52538655,"T","C","intergenic","LOC111090691;LOC111095940",null,"dist=51062;dist=58203"]
[1,"poor","chr1",52552630,52552630,"G","C","intergenic","LOC111090691;LOC111095940",null,"dist=65037;dist=44228"]
[1,"poor","chr1",52552631,52552631,"G","C","intergenic","LOC111090691;LOC111095940",null,"dist=65038;dist=44227"]
[1,"poor","chr1",52599986,52599986,"T","C","ncRNA_intronic","LOC111095940"]
[1,"poor","chr1",52689536,52689536,"T","C","intergenic","LOC111095940;C1H6orf118",null,"dist=72405;dist=727066"]
[1,"poor","chr1",52689541,52689541,"G","GTGCCCCTGTCCTCCA","intergenic","LOC111095940;C1H6orf118",null,"dist=72410;dist=727061"]
[1,"poor","chr1",52768209,52768209,"A","T","intergenic","LOC111095940;C1H6orf118",null,"dist=151078;dist=648393"]
[1,"poor","chr1",52772425,52772425,"C","A","intergenic","LOC111095940;C1H6orf118",null,"dist=155294;dist=644177"]
[1,"poor","chr1",52772430,52772430,"T","G","intergenic","LOC111095940;C1H6orf118",null,"dist=155299;dist=644172"]
[1,"poor","chr1",52831039,52831039,"T","G","intergenic","LOC111095940;C1H6orf118",null,"dist=213908;dist=585563"]
[1,"poor","chr1",52831040,52831040,"C","A","intergenic","LOC111095940;C1H6orf118",null,"dist=213909;dist=585562"]
[1,"poor","chr1",52864701,52864701,"G","GC","intergenic","LOC111095940;C1H6orf118",null,"dist=247570;dist=551901"]
[1,"poor","chr1",52947150,52947150,"G","A","intergenic","LOC111095940;C1H6orf118",null,"dist=330019;dist=469452"]
[1,"poor","chr1",52977233,52977233,"T","A","intergenic","LOC111095940;C1H6orf118",null,"dist=360102;dist=439369"]
[1,"poor","chr1",52977236,52977236,"T","A","intergenic","LOC111095940;C1H6orf118",null,"dist=360105;dist=439366"]
[1,"poor","chr1",53023571,53023571,"T","TGAC","intergenic","LOC111095940;C1H6orf118",null,"dist=406440;dist=393031"]
[1,"poor","chr1",53032656,53032656,"T","C","intergenic","LOC111095940;C1H6orf118",null,"dist=415525;dist=383946"]
[1,"poor","chr1",53089296,53089296,"C","A","intergenic","LOC111095940;C1H6orf118",null,"dist=472165;dist=327306"]
[1,"poor","chr1",53354359,53354359,"G","T","intergenic","LOC111095940;C1H6orf118",null,"dist=737228;dist=62243"]
[1,"poor","chr1",53429281,53429284,"CCTG","C","intronic","C1H6orf118"]
[1,"poor","chr1",53429289,53429289,"C","CCAG","intronic","C1H6orf118"]
[1,"poor","chr1",53545058,53545058,"A","T","intronic","PDE10A"]
[1,"poor","chr1",53545063,53545063,"A","T","intronic","PDE10A"]
[1,"poor","chr1",53582362,53582362,"A","G","intronic","PDE10A"]
[1,"poor","chr1",53690453,53690453,"G","C","ncRNA_exonic","LOC111095957"]
[1,"poor","chr1",53699819,53699819,"T","A","ncRNA_intronic","LOC102152011"]
[1,"poor","chr1",53708645,53708647,"GAA","G","ncRNA_intronic","LOC102152011"]
[1,"poor","chr1",53719066,53719066,"C","CATGCACCGGGAGCCCGA","ncRNA_intronic","LOC102152011"]
[1,"poor","chr1",53778578,53778578,"G","GTGCCTTTCCCTCTGCACACTT","intronic","PDE10A"]
[1,"poor","chr1",53850124,53850124,"T","G","intronic","LOC100685014;PDE10A"]
[1,"poor","chr1",53850125,53850125,"C","A","intronic","LOC100685014;PDE10A"]
[1,"poor","chr1",53920628,53920628,"G","A","intronic","PDE10A"]
[1,"poor","chr1",54017121,54017121,"A","G","intronic","PDE10A"]
[1,"poor","chr1",54207543,54207543,"A","G","intergenic","T;LOC111095958",null,"dist=15212;dist=121835"]
[1,"poor","chr1",54208449,54208449,"T","C","intergenic","T;LOC111095958",null,"dist=16118;dist=120929"]
[1,"poor","chr1",54208450,54208450,"G","GGTCATCACCACAGC","intergenic","T;LOC111095958",null,"dist=16119;dist=120928"]
[1,"poor","chr1",54326348,54326348,"A","T","intergenic","T;LOC111095958",null,"dist=134017;dist=3030"]
[1,"poor","chr1",54326349,54326349,"A","T","intergenic","T;LOC111095958",null,"dist=134018;dist=3029"]
[1,"poor","chr1",54448181,54448181,"C","A","intronic","RPS6KA2"]
[1,"poor","chr1",54448182,54448182,"C","CTGGGCTGGGTGTGCATT","intronic","RPS6KA2"]
[1,"poor","chr1",54515367,54515409,"ATCCCACTGGCAGGCCACGGGGTCCCACTGGTGGGCCACGGGG","A","intronic","RPS6KA2"]
[1,"poor","chr1",54626352,54626352,"A","G","intronic","RPS6KA2"]
[1,"poor","chr1",54626353,54626353,"C","T","intronic","RPS6KA2"]
[1,"poor","chr1",54719922,54719922,"A","AGTGCAGAGCCTG","intronic","RPS6KA2"]
[1,"poor","chr1",54731867,54731867,"A","G","intronic","RPS6KA2"]
[1,"poor","chr1",55022031,55022031,"C","T","intergenic","TCP10L2;TTLL2",null,"dist=2159;dist=14247"]
[1,"poor","chr1",55027382,55027382,"G","A","intergenic","TCP10L2;TTLL2",null,"dist=7510;dist=8896"]
[1,"poor","chr1",55091697,55091697,"G","C","intronic","UNC93A"]
[1,"poor","chr1",55091705,55091705,"A","AAGGGAG","intronic","UNC93A"]
[1,"poor","chr1",55163839,55163839,"C","CCACAGAGCCA","intergenic","LOC102153253;LOC111090695",null,"dist=56922;dist=13307"]
[1,"poor","chr1",55163842,55163842,"T","A","intergenic","LOC102153253;LOC111090695",null,"dist=56925;dist=13304"]
[1,"poor","chr1",55240771,55240771,"C","G","intergenic","LOC111095985;LOC106559705",null,"dist=27566;dist=13961"]
[1,"poor","chr1",55240778,55240778,"G","GCCGT","intergenic","LOC111095985;LOC106559705",null,"dist=27573;dist=13954"]
[1,"poor","chr1",55276692,55276722,"TACACAGGCACACACATACACATGCACAGAC","T","intergenic","LOC106559705;LOC111095986",null,"dist=9435;dist=23351"]
[1,"poor","chr1",55356989,55356989,"C","A","intergenic","LOC111095986;LOC111095989",null,"dist=51779;dist=14438"]
[1,"poor","chr1",55435772,55435772,"G","A","intronic","AFDN"]
[1,"poor","chr1",55503915,55503915,"T","G","intronic","AFDN"]
[1,"poor","chr1",55564425,55564425,"C","G","intronic","KIF25"]
[1,"poor","chr1",55564432,55564432,"C","CTCACAGTTGTGTAGCTCGGTA","intronic","KIF25"]
[1,"poor","chr1",55597330,55597336,"CCCAGCA","C","intronic","FRMD1"]
[1,"poor","chr1",55631191,55631191,"G","C","intergenic","FRMD1;LOC111090696",null,"dist=7764;dist=48524"]
[1,"poor","chr1",55631192,55631192,"G","C","intergenic","FRMD1;LOC111090696",null,"dist=7765;dist=48523"]
[1,"poor","chr1",55662532,55662532,"T","C","intergenic","FRMD1;LOC111090696",null,"dist=39105;dist=17183"]
[1,"poor","chr1",55675153,55675153,"T","TACAA","intergenic","FRMD1;LOC111090696",null,"dist=51726;dist=4562"]
[1,"poor","chr1",55703101,55703101,"G","A","intergenic","LOC111090696;DACT2",null,"dist=20354;dist=22940"]
[1,"poor","chr1",55771250,55771250,"T","A","ncRNA_exonic","LOC102153625"]
[1,"poor","chr1",55776705,55776705,"T","C","intergenic","LOC102153625;SMOC2",null,"dist=4179;dist=49649"]
[1,"poor","chr1",55782185,55782185,"G","GC","intergenic","LOC102153625;SMOC2",null,"dist=9659;dist=44169"]
[1,"poor","chr1",55783192,55783192,"A","G","intergenic","LOC102153625;SMOC2",null,"dist=10666;dist=43162"]
[1,"poor","chr1",55886691,55886691,"A","G","intronic","SMOC2"]
[1,"poor","chr1",56008807,56008807,"T","A","intergenic","SMOC2;LOC102153755",null,"dist=22754;dist=101574"]
[1,"poor","chr1",56008816,56008816,"G","T","intergenic","SMOC2;LOC102153755",null,"dist=22763;dist=101565"]
[1,"poor","chr1",56105556,56105556,"T","A","intergenic","SMOC2;LOC102153755",null,"dist=119503;dist=4825"]
[1,"poor","chr1",56106577,56106577,"G","A","intergenic","SMOC2;LOC102153755",null,"dist=120524;dist=3804"]
[1,"poor","chr1",56168639,56168639,"A","T","intergenic","LOC102153755;THBS2",null,"dist=54022;dist=233880"]
[1,"poor","chr1",56169534,56169534,"C","T","intergenic","LOC102153755;THBS2",null,"dist=54917;dist=232985"]
[1,"poor","chr1",56275513,56275513,"G","A","intergenic","LOC102153755;THBS2",null,"dist=160896;dist=127006"]
[1,"poor","chr1",56281519,56281519,"G","A","intergenic","LOC102153755;THBS2",null,"dist=166902;dist=121000"]
[1,"poor","chr1",56365643,56365643,"T","C","intergenic","LOC102153755;THBS2",null,"dist=251026;dist=36876"]
[1,"poor","chr1",56388715,56388715,"G","A","intergenic","LOC102153755;THBS2",null,"dist=274098;dist=13804"]
[1,"poor","chr1",56424047,56424047,"G","C","intronic","THBS2"]
[1,"poor","chr1",56443196,56443196,"A","C","ncRNA_intronic","LOC102153803"]
[1,"poor","chr1",56443201,56443201,"G","T","ncRNA_intronic","LOC102153803"]
[1,"poor","chr1",56466895,56466899,"TGGGA","T","intergenic","LOC102153803;WDR27",null,"dist=10014;dist=106533"]
[1,"poor","chr1",56466901,56466917,"ACCCTCAGACACCCTGG","A","intergenic","LOC102153803;WDR27",null,"dist=10020;dist=106515"]
[1,"poor","chr1",56506947,56506947,"T","G","intergenic","LOC102153803;WDR27",null,"dist=50066;dist=66485"]
[1,"poor","chr1",56506948,56506948,"C","A","intergenic","LOC102153803;WDR27",null,"dist=50067;dist=66484"]
[1,"poor","chr1",56563204,56563204,"G","C","intergenic","LOC102153803;WDR27",null,"dist=106323;dist=10228"]
[1,"poor","chr1",56570404,56570404,"C","T","intergenic","LOC102153803;WDR27",null,"dist=113523;dist=3028"]
[1,"poor","chr1",56643728,56643728,"A","G","intronic","WDR27"]
[1,"poor","chr1",56658337,56658337,"A","C","intronic","WDR27"]
[1,"poor","chr1",56832465,56832465,"C","CCCCACTGGGCTCCCTGCT","intronic","DSE"]
[1,"poor","chr1",56874479,56874479,"T","C","intergenic","DSE;CALHM6",null,"dist=6442;dist=20086"]
[1,"poor","chr1",56911214,56911214,"T","A","intergenic","CALHM6;TRAPPC3L",null,"dist=14549;dist=10804"]
[1,"poor","chr1",56927280,56927280,"C","T","intronic","CALHM4;TRAPPC3L"]
[1,"poor","chr1",56976747,56976747,"A","G","intronic","CALHM4;TRAPPC3L"]
[1,"poor","chr1",57061181,57061181,"G","C","intergenic","LOC612537;RSPH4A",null,"dist=15106;dist=2571"]
[1,"poor","chr1",57229411,57229411,"T","C","intergenic","GPRC6A;RFX6",null,"dist=17403;dist=13152"]
[1,"poor","chr1",57246754,57246755,"GC","G","intronic","RFX6"]
[1,"poor","chr1",57246758,57246758,"A","AG","intronic","RFX6"]
[1,"poor","chr1",57258241,57258241,"T","A","intronic","RFX6"]
[1,"poor","chr1",57258244,57258244,"T","A","intronic","RFX6"]
[1,"poor","chr1",57393831,57393831,"G","A","intergenic","LOC111090702;VGLL2",null,"dist=46428;dist=136070"]
[1,"poor","chr1",57423213,57423213,"A","T","intergenic","LOC111090702;VGLL2",null,"dist=75810;dist=106688"]
[1,"poor","chr1",57453855,57453855,"C","T","intergenic","LOC111090702;VGLL2",null,"dist=106452;dist=76046"]
[1,"poor","chr1",57557407,57557407,"A","G","ncRNA_intronic","LOC106558782"]
[1,"poor","chr1",57560151,57560151,"G","C","ncRNA_intronic","LOC106558782"]
[1,"poor","chr1",57560160,57560160,"G","C","ncRNA_intronic","LOC106558782"]
[1,"poor","chr1",57602317,57602317,"G","GA","intronic","ROS1"]
[1,"poor","chr1",57617602,57617602,"G","A","intronic","ROS1"]
[1,"poor","chr1",57639877,57639877,"C","CGG","intronic","ROS1"]
[1,"poor","chr1",57639881,57639881,"A","T","intronic","ROS1"]
[1,"poor","chr1",57651602,57651602,"T","C","intronic","ROS1"]
[1,"poor","chr1",57674142,57674145,"TAAA","T","intronic","ROS1"]
[1,"poor","chr1",57684994,57684994,"G","A","intergenic","ROS1;GOPC",null,"dist=7453;dist=105124"]
[1,"poor","chr1",57699088,57699088,"T","C","intergenic","ROS1;GOPC",null,"dist=21547;dist=91030"]
[1,"poor","chr1",57796613,57796613,"C","G","intronic","GOPC"]
[1,"poor","chr1",58012722,58012722,"G","A","intronic","SLC35F1"]
[1,"poor","chr1",58012727,58012727,"T","C","intronic","SLC35F1"]
[1,"poor","chr1",58120657,58120657,"T","C","ncRNA_intronic","LOC111096073"]
[1,"poor","chr1",58120660,58120660,"C","T","ncRNA_intronic","LOC111096073"]
[1,"poor","chr1",58200187,58200188,"GA","G","ncRNA_intronic","LOC111096073"]
[1,"poor","chr1",58200189,58200192,"CTGT","C","ncRNA_intronic","LOC111096073"]
[1,"poor","chr1",58405650,58405650,"T","C","intergenic","SLC35F1;LOC111096075",null,"dist=7663;dist=4958"]
[1,"poor","chr1",58405651,58405651,"G","A","intergenic","SLC35F1;LOC111096075",null,"dist=7664;dist=4957"]
[1,"poor","chr1",58431008,58431008,"A","C","intergenic","LOC111096075;CEP85L",null,"dist=12260;dist=63544"]
[1,"poor","chr1",58463697,58463697,"A","G","intergenic","LOC111096075;CEP85L",null,"dist=44949;dist=30855"]
[1,"poor","chr1",58676691,58676691,"T","A","intergenic","CEP85L;LOC111096082",null,"dist=33586;dist=5359"]
[1,"poor","chr1",58732841,58732841,"C","T","ncRNA_exonic","LOC111096094"]
[1,"poor","chr1",58732843,58732843,"C","T","ncRNA_exonic","LOC111096094"]
[1,"poor","chr1",58763872,58763872,"T","C","intronic","MCM9","NA"]
[1,"poor","chr1",59101302,59101302,"G","GCA","intergenic","LOC111096169;MAN1A1",null,"dist=74809;dist=5532"]
[1,"poor","chr1",59304651,59304651,"A","G","intergenic","MAN1A1;LOC111096174",null,"dist=29715;dist=821437"]
[1,"poor","chr1",59304713,59304713,"C","T","intergenic","MAN1A1;LOC111096174",null,"dist=29777;dist=821375"]
[1,"poor","chr1",59304727,59304727,"G","A","intergenic","MAN1A1;LOC111096174",null,"dist=29791;dist=821361"]
[1,"poor","chr1",59367077,59367079,"CAA","C","intergenic","MAN1A1;LOC111096174",null,"dist=92141;dist=759009"]
[1,"poor","chr1",59376789,59376789,"C","T","intergenic","MAN1A1;LOC111096174",null,"dist=101853;dist=749299"]
[1,"poor","chr1",59410824,59410824,"T","C","intergenic","MAN1A1;LOC111096174",null,"dist=135888;dist=715264"]
[1,"poor","chr1",59410832,59410832,"A","G","intergenic","MAN1A1;LOC111096174",null,"dist=135896;dist=715256"]
[1,"poor","chr1",59630625,59630625,"A","G","intergenic","MAN1A1;LOC111096174",null,"dist=355689;dist=495463"]
[1,"poor","chr1",59631405,59631405,"G","T","intergenic","MAN1A1;LOC111096174",null,"dist=356469;dist=494683"]
[1,"poor","chr1",59631409,59631409,"C","T","intergenic","MAN1A1;LOC111096174",null,"dist=356473;dist=494679"]
[1,"poor","chr1",59666187,59666187,"A","C","intergenic","MAN1A1;LOC111096174",null,"dist=391251;dist=459901"]
[1,"poor","chr1",59666189,59666189,"G","T","intergenic","MAN1A1;LOC111096174",null,"dist=391253;dist=459899"]
[1,"poor","chr1",59811092,59811092,"G","A","intergenic","MAN1A1;LOC111096174",null,"dist=536156;dist=314996"]
[1,"poor","chr1",59811096,59811096,"G","C","intergenic","MAN1A1;LOC111096174",null,"dist=536160;dist=314992"]
[1,"poor","chr1",60132168,60132168,"G","A","intergenic","LOC111096174;LOC111096173",null,"dist=2738;dist=393948"]
[1,"poor","chr1",60132169,60132169,"C","G","intergenic","LOC111096174;LOC111096173",null,"dist=2739;dist=393947"]
[1,"poor","chr1",60348135,60348135,"A","C","intergenic","LOC111096174;LOC111096173",null,"dist=218705;dist=177981"]
[1,"poor","chr1",60348140,60348140,"G","T","intergenic","LOC111096174;LOC111096173",null,"dist=218710;dist=177976"]
[1,"poor","chr1",60385633,60385637,"CTTAA","C","intergenic","LOC111096174;LOC111096173",null,"dist=256203;dist=140479"]
[1,"poor","chr1",60498645,60498645,"A","G","intergenic","LOC111096174;LOC111096173",null,"dist=369215;dist=27471"]
[1,"poor","chr1",60597806,60597806,"G","C","intergenic","LOC111096173;LOC111096172","TOLERATED","dist=9138;dist=28281"]
[1,"poor","chr1",60598870,60598870,"A","G","intergenic","LOC111096173;LOC111096172","NA","dist=10202;dist=27217"]
[1,"poor","chr1",60599569,60599570,"CT","C","intergenic","LOC111096173;LOC111096172",null,"dist=10901;dist=26517"]
[1,"poor","chr1",60726266,60726266,"G","A","ncRNA_intronic","LOC111096177"]
[1,"poor","chr1",60810229,60810229,"G","GA","intronic","TBC1D32"]
[1,"poor","chr1",60831237,60831237,"A","G","intronic","TBC1D32"]
[1,"poor","chr1",60888120,60888120,"A","G","intergenic","LOC102157283;GJA1",null,"dist=12968;dist=53652"]
[1,"poor","chr1",61078371,61078371,"C","G","intergenic","GJA1;LOC106559720",null,"dist=133677;dist=29011"]
[1,"poor","chr1",61078377,61078377,"T","C","intergenic","GJA1;LOC106559720",null,"dist=133683;dist=29005"]
[1,"poor","chr1",61262839,61262844,"TTACCC","T","intergenic","LOC106559720;LOC106558802",null,"dist=123478;dist=1567"]
[1,"poor","chr1",61275480,61275480,"A","T","ncRNA_intronic","LOC106558802"]
[1,"poor","chr1",61275481,61275481,"A","T","ncRNA_intronic","LOC106558802"]
[1,"poor","chr1",61323819,61323820,"GA","G","ncRNA_intronic","LOC106558802"]
[1,"poor","chr1",61323822,61323822,"A","AT","ncRNA_intronic","LOC106558802"]
[1,"poor","chr1",61391046,61391047,"TC","T","ncRNA_intronic","LOC106558802"]
[1,"poor","chr1",61411006,61411006,"G","C","ncRNA_intronic","LOC106558802"]
[1,"poor","chr1",61411007,61411007,"T","TCC","ncRNA_intronic","LOC106558802"]
[1,"poor","chr1",61448919,61448919,"C","G","ncRNA_intronic","LOC106558802"]
[1,"poor","chr1",61448928,61448928,"G","GC","ncRNA_intronic","LOC106558802"]
[1,"poor","chr1",61484996,61485000,"TAAAC","T","ncRNA_intronic","LOC106558802"]
[1,"poor","chr1",61524424,61524424,"G","T","intergenic","LOC106558802;LOC111096196",null,"dist=33531;dist=132021"]
[1,"poor","chr1",61536402,61536416,"GCTGTTACCCTAATA","G","intergenic","LOC106558802;LOC111096196",null,"dist=45509;dist=120029"]
[1,"poor","chr1",61536431,61536431,"A","G","intergenic","LOC106558802;LOC111096196",null,"dist=45538;dist=120014"]
[1,"poor","chr1",61664893,61664893,"C","A","ncRNA_intronic","LOC111096196"]
[1,"poor","chr1",61774294,61774294,"C","T","intergenic","LOC111096196;HSF2",null,"dist=30087;dist=3003"]
[1,"poor","chr1",61774297,61774297,"T","C","intergenic","LOC111096196;HSF2",null,"dist=30090;dist=3000"]
[1,"poor","chr1",61777996,61777996,"C","CCT","intronic","HSF2"]
[1,"poor","chr1",61865534,61865534,"C","T","intergenic","SERINC1;PKIB",null,"dist=20189;dist=94932"]
[1,"poor","chr1",61865547,61865547,"C","A","intergenic","SERINC1;PKIB",null,"dist=20202;dist=94919"]
[1,"poor","chr1",61867389,61867389,"T","C","intergenic","SERINC1;PKIB",null,"dist=22044;dist=93077"]
[1,"poor","chr1",61868796,61868796,"G","T","intergenic","SERINC1;PKIB",null,"dist=23451;dist=91670"]
[1,"poor","chr1",61953437,61953437,"A","C","intergenic","SERINC1;PKIB",null,"dist=108092;dist=7029"]
[1,"poor","chr1",61953442,61953442,"G","T","intergenic","SERINC1;PKIB",null,"dist=108097;dist=7024"]
[1,"poor","chr1",61963484,61963486,"CCG","C","intronic","PKIB"]
[1,"poor","chr1",61963489,61963489,"T","TGC","intronic","PKIB"]
[1,"poor","chr1",62285104,62285104,"C","T","UTR3","CLVS2",null,"XM_014113492.2:c.*2692C>T"]
[1,"poor","chr1",62285105,62285105,"A","G","UTR3","CLVS2",null,"XM_014113492.2:c.*2693A>G"]
[1,"poor","chr1",62390546,62390546,"T","A","intergenic","CLVS2;TRDN",null,"dist=103693;dist=12217"]
[1,"poor","chr1",62411664,62411664,"C","CTGATG","intronic","TRDN"]
[1,"poor","chr1",62671210,62671224,"TGTGTGCGCGCGCGC","T","intronic","TRDN"]
[1,"poor","chr1",62679306,62679306,"C","T","intronic","TRDN"]
[1,"poor","chr1",62686099,62686099,"G","A","intronic","TRDN"]
[1,"poor","chr1",62697246,62697246,"A","T","intronic","TRDN"]
[1,"poor","chr1",62717786,62717786,"A","T","intronic","TRDN"]
[1,"poor","chr1",62759920,62759920,"C","T","intronic","TRDN"]
[1,"poor","chr1",62801301,62801301,"A","T","intergenic","TRDN;LOC106558813",null,"dist=38584;dist=109497"]
[1,"poor","chr1",62921999,62921999,"T","G","intergenic","LOC106558813;LOC111096209",null,"dist=9308;dist=102875"]
[1,"poor","chr1",62990434,62990439,"TCAAAG","T","intergenic","LOC106558813;LOC111096209",null,"dist=77743;dist=34435"]
[1,"poor","chr1",63034679,63034679,"T","C","intergenic","LOC111096209;LOC111096210",null,"dist=4411;dist=14383"]
[1,"poor","chr1",63074783,63074783,"A","G","intergenic","LOC111096210;NKAIN2",null,"dist=13356;dist=17173"]
[1,"poor","chr1",63074784,63074784,"C","T","intergenic","LOC111096210;NKAIN2",null,"dist=13357;dist=17172"]
[1,"poor","chr1",63157918,63157918,"A","G","intronic","NKAIN2"]
[1,"poor","chr1",63165819,63165819,"T","A","intronic","NKAIN2"]
[1,"poor","chr1",63216052,63216052,"T","G","intronic","NKAIN2"]
[1,"poor","chr1",63468353,63468353,"A","C","intronic","NKAIN2"]
[1,"poor","chr1",63541905,63541905,"T","A","intronic","NKAIN2"]
[1,"poor","chr1",63541912,63541912,"T","A","intronic","NKAIN2"]
[1,"poor","chr1",63723447,63723447,"A","T","intronic","NKAIN2"]
[1,"poor","chr1",63723450,63723450,"A","T","intronic","NKAIN2"]
[1,"poor","chr1",63779190,63779190,"A","T","intronic","NKAIN2"]
[1,"poor","chr1",63779195,63779195,"A","T","intronic","NKAIN2"]
[1,"poor","chr1",63842817,63842817,"A","T","intronic","NKAIN2"]
[1,"poor","chr1",63902889,63902889,"C","G","upstream","RNF217",null,"dist=96"]
[1,"poor","chr1",63936656,63936656,"C","CTCAAGGTGTGG","intronic","RNF217"]
[1,"poor","chr1",63940260,63940260,"C","A","intronic","RNF217"]
[1,"poor","chr1",63940265,63940265,"T","G","intronic","RNF217"]
[1,"poor","chr1",64076689,64076689,"T","A","intronic","RNF217"]
[1,"poor","chr1",64119123,64119123,"A","C","intergenic","RNF217;TPD52L1",null,"dist=24632;dist=46710"]
[1,"poor","chr1",64282991,64282991,"G","GC","intronic","LOC111096211"]
[1,"poor","chr1",64324130,64324130,"C","G","intergenic","LOC111096211;HEY2",null,"dist=32800;dist=306526"]
[1,"poor","chr1",64404605,64404605,"G","GAGTGCTGTTTGCCAGCACTCTGTGA","intergenic","LOC111096211;HEY2",null,"dist=113275;dist=226051"]
[1,"poor","chr1",64429727,64429727,"C","G","intergenic","LOC111096211;HEY2",null,"dist=138397;dist=200929"]
[1,"poor","chr1",64439058,64439058,"A","G","intergenic","LOC111096211;HEY2",null,"dist=147728;dist=191598"]
[1,"poor","chr1",64762096,64762096,"T","C","intronic","NCOA7"]
[1,"poor","chr1",64762102,64762102,"G","GCTTTTTCCACTTGAGAACC","intronic","NCOA7"]
[1,"poor","chr1",64889201,64889201,"A","G","intronic","TRMT11"]
[1,"poor","chr1",65019097,65019097,"T","G","ncRNA_intronic","LOC111096229"]
[1,"poor","chr1",65034752,65034752,"T","C","ncRNA_intronic","LOC111096229"]
[1,"poor","chr1",65065303,65065303,"A","C","ncRNA_intronic","LOC111096229"]
[1,"poor","chr1",65083629,65083629,"C","T","intergenic","LOC111096229;LOC111096230",null,"dist=17781;dist=41863"]
[1,"poor","chr1",65088638,65088638,"C","G","intergenic","LOC111096229;LOC111096230",null,"dist=22790;dist=36854"]
[1,"poor","chr1",65167629,65167629,"T","A","intergenic","LOC111096230;CENPW",null,"dist=10233;dist=4156"]
[1,"poor","chr1",65203338,65203338,"C","T","intergenic","CENPW;LOC111096231",null,"dist=24981;dist=31269"]
[1,"poor","chr1",65252271,65252271,"A","C","ncRNA_intronic","LOC111096231"]
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[1,"poor","chr1",75498980,75498980,"C","G","intronic","RMI1"]
[1,"poor","chr1",75534789,75534789,"A","G","intronic","C1H9orf64"]
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[1,"poor","chr1",75576136,75576136,"C","T","intronic","KIF27"]
[1,"poor","chr1",75686935,75686935,"C","T","intronic","GKAP1"]
[1,"poor","chr1",75686940,75686940,"A","G","intronic","GKAP1"]
[1,"poor","chr1",75788016,75788016,"T","A","intronic","UBQLN1"]
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[1,"poor","chr1",75906305,75906305,"C","CTCTGCACCCAAGCAGAG","intronic","FRMD3"]
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[1,"poor","chr1",75923425,75923425,"T","TGCACATGAGCATGTACACAGTACATGCACATGTGCACAC","intronic","FRMD3"]
[1,"poor","chr1",75965161,75965161,"T","C","intronic","FRMD3"]
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[1,"poor","chr1",76064250,76064251,"AT","A","intronic","FRMD3"]
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[1,"poor","chr1",85912004,85912004,"G","T","ncRNA_intronic","LOC106559439"]
[1,"poor","chr1",85988703,85988703,"T","C","intronic","TMEM2"]
[1,"poor","chr1",85988705,85988705,"C","CAGAG","intronic","TMEM2"]
[1,"poor","chr1",86078019,86078019,"T","C","intergenic","TMEM2;TRPM3",null,"dist=57064;dist=447035"]
[1,"poor","chr1",86139784,86139784,"G","T","intergenic","TMEM2;TRPM3",null,"dist=118829;dist=385270"]
[1,"poor","chr1",86253312,86253312,"C","G","intergenic","TMEM2;TRPM3",null,"dist=232357;dist=271742"]
[1,"poor","chr1",86253317,86253317,"C","A","intergenic","TMEM2;TRPM3",null,"dist=232362;dist=271737"]
[1,"poor","chr1",86380442,86380442,"C","T","intergenic","TMEM2;TRPM3",null,"dist=359487;dist=144612"]
[1,"poor","chr1",86415842,86415842,"A","T","intergenic","TMEM2;TRPM3",null,"dist=394887;dist=109212"]
[1,"poor","chr1",86428242,86428242,"G","GTGGGAGGCAC","intergenic","TMEM2;TRPM3",null,"dist=407287;dist=96812"]
[1,"poor","chr1",86428248,86428248,"C","G","intergenic","TMEM2;TRPM3",null,"dist=407293;dist=96806"]
[1,"poor","chr1",86531625,86531625,"C","A","intronic","TRPM3"]
[1,"poor","chr1",86538202,86538202,"T","C","intronic","TRPM3"]
[1,"poor","chr1",86538209,86538209,"G","C","intronic","TRPM3"]
[1,"poor","chr1",86569919,86569919,"G","A","intronic","TRPM3"]
[1,"poor","chr1",86595906,86595906,"G","T","intronic","TRPM3"]
[1,"poor","chr1",86637464,86637464,"T","C","intronic","TRPM3"]
[1,"poor","chr1",86766168,86766168,"C","CTGCCCTTAATCTGGGCAGTGCCATCGGGGCATGCCTGGGAG","ncRNA_intronic","LOC111096727"]
[1,"poor","chr1",86850251,86850251,"C","T","ncRNA_intronic","LOC111096727"]
[1,"poor","chr1",86850252,86850252,"A","G","ncRNA_intronic","LOC111096727"]
[1,"poor","chr1",86918054,86918054,"T","G","intronic","TRPM3"]
[1,"poor","chr1",86918055,86918055,"C","A","intronic","TRPM3"]
[1,"poor","chr1",87009560,87009560,"G","A","ncRNA_exonic","LOC111096729"]
[1,"poor","chr1",87043479,87043479,"C","T","intergenic","TRPM3;LOC111096732",null,"dist=19918;dist=3696"]
[1,"poor","chr1",87096328,87096328,"A","T","intergenic","LOC111096732;KLF9",null,"dist=27984;dist=12982"]
[1,"poor","chr1",87096329,87096329,"A","T","intergenic","LOC111096732;KLF9",null,"dist=27985;dist=12981"]
[1,"poor","chr1",87136769,87136769,"C","T","intronic","KLF9"]
[1,"poor","chr1",87244265,87244268,"AAAG","A","intronic","SMC5"]
[1,"poor","chr1",87270626,87270626,"G","A","intronic","SMC5"]
[1,"poor","chr1",87270627,87270627,"T","C","intronic","SMC5"]
[1,"poor","chr1",87415328,87415331,"ATAT","A","intronic","MAMDC2"]
[1,"poor","chr1",87415339,87415339,"G","GATA","intronic","MAMDC2"]
[1,"poor","chr1",87442369,87442369,"T","C","intronic","MAMDC2"]
[1,"poor","chr1",87527777,87527778,"CT","C","intergenic","MAMDC2;LOC106559459",null,"dist=76580;dist=28845"]
[1,"poor","chr1",87622056,87622056,"G","A","intronic","C1H9orf135"]
[1,"poor","chr1",87783581,87783581,"G","T","intergenic","PTAR1;APBA1",null,"dist=23853;dist=3458"]
[1,"poor","chr1",87783582,87783582,"A","ATGTAATGTTTATACTCCTATTTTAGTTTTGTTAATT","intergenic","PTAR1;APBA1",null,"dist=23854;dist=3457"]
[1,"poor","chr1",87904314,87904319,"GCCCCC","G","intronic","APBA1"]
[1,"poor","chr1",87904321,87904321,"C","CGGGGG","intronic","APBA1"]
[1,"poor","chr1",87962925,87962925,"A","AGCAGCTGAGTGAGGACAGCTGCTCTCGGGACGAGG","intronic","APBA1"]
[1,"poor","chr1",87996207,87996207,"C","T","UTR3","LOC102155525",null,"XM_022421417.1:c.*1629C>T"]
[1,"poor","chr1",87996214,87996214,"T","A","UTR3","LOC102155525",null,"XM_022421417.1:c.*1636T>A"]
[1,"poor","chr1",88013467,88013467,"C","G","intronic","FAM189A2"]
[1,"poor","chr1",88013468,88013468,"C","A","intronic","FAM189A2"]
[1,"poor","chr1",88041266,88041266,"T","C","intronic","FAM189A2"]
[1,"poor","chr1",88041269,88041269,"A","G","intronic","FAM189A2"]
[1,"poor","chr1",88322163,88322163,"C","T","intergenic","FXN;PIP5K1B",null,"dist=10935;dist=37013"]
[1,"poor","chr1",88456125,88456125,"A","C","intronic","PIP5K1B"]
[1,"poor","chr1",88456130,88456130,"G","T","intronic","PIP5K1B"]
[1,"poor","chr1",88476707,88476707,"T","A","intronic","PIP5K1B"]
[1,"poor","chr1",88476708,88476708,"C","G","intronic","PIP5K1B"]
[1,"poor","chr1",88507537,88507537,"C","T","intronic","PIP5K1B"]
[1,"poor","chr1",88507538,88507538,"T","A","intronic","PIP5K1B"]
[1,"poor","chr1",88535787,88535787,"A","G","ncRNA_intronic","LOC111096775"]
[1,"poor","chr1",88626489,88626489,"T","C","intergenic","PIP5K1B;LOC106559468",null,"dist=1142;dist=39132"]
[1,"poor","chr1",88626491,88626491,"A","G","intergenic","PIP5K1B;LOC106559468",null,"dist=1144;dist=39130"]
[1,"poor","chr1",88786383,88786383,"T","TG","intergenic","LOC102156201;TMEM252",null,"dist=12459;dist=28137"]
[1,"poor","chr1",88786385,88786386,"AC","A","intergenic","LOC102156201;TMEM252",null,"dist=12461;dist=28134"]
[1,"poor","chr1",89043960,89043960,"G","T","intergenic","PGM5;CBWD2",null,"dist=32869;dist=19551"]
[1,"poor","chr1",89043963,89043963,"A","C","intergenic","PGM5;CBWD2",null,"dist=32872;dist=19548"]
[1,"poor","chr1",89087010,89087010,"C","CTGCTGGGGTAAATCCCCAGCAGTGCAAT","intronic","CBWD2"]
[1,"poor","chr1",89141609,89141609,"A","C","intergenic","CBWD2;DOCK8",null,"dist=20614;dist=10847"]
[1,"poor","chr1",89141612,89141612,"G","T","intergenic","CBWD2;DOCK8",null,"dist=20617;dist=10844"]
[1,"poor","chr1",89251157,89251157,"T","A","intronic","DOCK8"]
[1,"poor","chr1",89281208,89281208,"T","C","intronic","DOCK8"]
[1,"poor","chr1",89289442,89289442,"G","A","intronic","DOCK8"]
[1,"poor","chr1",89343281,89343281,"C","CA","intronic","DOCK8"]
[1,"poor","chr1",89388284,89388284,"T","C","intergenic","DOCK8;KANK1",null,"dist=9081;dist=58056"]
[1,"poor","chr1",89392873,89392873,"T","G","intergenic","DOCK8;KANK1",null,"dist=13670;dist=53467"]
[1,"poor","chr1",89584344,89584344,"C","T","intronic","KANK1"]
[1,"poor","chr1",89660575,89660575,"T","C","intergenic","KANK1;DMRT1",null,"dist=41859;dist=16979"]
[1,"poor","chr1",89660576,89660576,"G","A","intergenic","KANK1;DMRT1",null,"dist=41860;dist=16978"]
[1,"poor","chr1",89688324,89688324,"G","A","intronic","DMRT1"]
[1,"poor","chr1",89712209,89712209,"A","T","intronic","DMRT1"]
[1,"poor","chr1",89747589,89747589,"C","G","intronic","DMRT1"]
[1,"poor","chr1",89747598,89747600,"AGT","A","intronic","DMRT1"]
[1,"poor","chr1",89787818,89787818,"T","TG","intronic","DMRT1"]
[1,"poor","chr1",89840886,89840886,"T","TAA","intergenic","DMRT3;LOC106559228",null,"dist=27746;dist=32494"]
[1,"poor","chr1",89854384,89854384,"A","G","intergenic","DMRT3;LOC106559228",null,"dist=41244;dist=18996"]
[1,"poor","chr1",90043785,90043785,"A","G","intergenic","LOC106559228;LOC111096817",null,"dist=162841;dist=175202"]
[1,"poor","chr1",90210106,90210106,"A","ACCTGGATGAGTTCCACATCCAGGTTCCCTGTAGGGAG","intergenic","LOC106559228;LOC111096817",null,"dist=329162;dist=8881"]
[1,"poor","chr1",90214812,90214812,"C","T","intergenic","LOC106559228;LOC111096817",null,"dist=333868;dist=4175"]
[1,"poor","chr1",90257043,90257043,"A","T","intergenic","LOC111096817;LOC111090766",null,"dist=32508;dist=98169"]
[1,"poor","chr1",90257051,90257051,"T","TCCAGTAGA","intergenic","LOC111096817;LOC111090766",null,"dist=32516;dist=98161"]
[1,"poor","chr1",90351597,90351597,"G","A","intergenic","LOC111096817;LOC111090766",null,"dist=127062;dist=3615"]
[1,"poor","chr1",90410183,90410183,"C","G","intergenic","LOC111090766;LOC111096818",null,"dist=13304;dist=295203"]
[1,"poor","chr1",90469916,90469916,"G","A","intergenic","LOC111090766;LOC111096818",null,"dist=73037;dist=235470"]
[1,"poor","chr1",90477776,90477776,"T","C","intergenic","LOC111090766;LOC111096818",null,"dist=80897;dist=227610"]
[1,"poor","chr1",90477779,90477779,"G","A","intergenic","LOC111090766;LOC111096818",null,"dist=80900;dist=227607"]
[1,"poor","chr1",90694218,90694218,"T","C","intergenic","LOC111090766;LOC111096818",null,"dist=297339;dist=11168"]
[1,"poor","chr1",90735327,90735327,"T","C","intronic","SMARCA2"]
[1,"poor","chr1",90780512,90780512,"G","A","intronic","SMARCA2"]
[1,"poor","chr1",90780531,90780531,"T","C","intronic","SMARCA2"]
[1,"poor","chr1",90825942,90825942,"G","A","intronic","SMARCA2"]
[1,"poor","chr1",90942657,90942657,"C","G","intergenic","SMARCA2;LOC102151732",null,"dist=58362;dist=142487"]
[1,"poor","chr1",90942665,90942665,"C","CGTGGTTTCCAG","intergenic","SMARCA2;LOC102151732",null,"dist=58370;dist=142479"]
[1,"poor","chr1",90957676,90957676,"T","C","intergenic","SMARCA2;LOC102151732",null,"dist=73381;dist=127468"]
[1,"poor","chr1",90991638,90991638,"G","A","intergenic","SMARCA2;LOC102151732",null,"dist=107343;dist=93506"]
[1,"poor","chr1",90995558,90995558,"A","G","intergenic","SMARCA2;LOC102151732",null,"dist=111263;dist=89586"]
[1,"poor","chr1",90997937,90997937,"A","T","intergenic","SMARCA2;LOC102151732",null,"dist=113642;dist=87207"]
[1,"poor","chr1",91001406,91001406,"T","A","intergenic","SMARCA2;LOC102151732",null,"dist=117111;dist=83738"]
[1,"poor","chr1",91011222,91011222,"T","G","intergenic","SMARCA2;LOC102151732",null,"dist=126927;dist=73922"]
[1,"poor","chr1",91020029,91020029,"A","G","intergenic","SMARCA2;LOC102151732",null,"dist=135734;dist=65115"]
[1,"poor","chr1",91020030,91020030,"C","T","intergenic","SMARCA2;LOC102151732",null,"dist=135735;dist=65114"]
[1,"poor","chr1",91086259,91086259,"T","A","ncRNA_exonic","LOC102151732"]
[1,"poor","chr1",91086262,91086262,"T","A","ncRNA_exonic","LOC102151732"]
[1,"poor","chr1",91095719,91095719,"A","C","ncRNA_intronic","LOC102151732"]
[1,"poor","chr1",91095724,91095724,"G","T","ncRNA_intronic","LOC102151732"]
[1,"poor","chr1",91108826,91108826,"G","A","ncRNA_intronic","LOC102151732"]
[1,"poor","chr1",91249678,91249678,"A","G","intronic","VLDLR"]
[1,"poor","chr1",91249679,91249679,"C","T","intronic","VLDLR"]
[1,"poor","chr1",91312019,91312019,"A","AGGGGTGG","intergenic","VLDLR;KCNV2",null,"dist=34989;dist=26382"]
[1,"poor","chr1",91312020,91312020,"A","AGAGGGTCTGGCATGATTTTCTGACATAGGGTC","intergenic","VLDLR;KCNV2",null,"dist=34990;dist=26381"]
[1,"poor","chr1",91385128,91385128,"T","G","intergenic","LOC111096835;PUM3",null,"dist=7616;dist=6491"]
[1,"poor","chr1",91385133,91385133,"C","CCTGTTTGGGGTGAA","intergenic","LOC111096835;PUM3",null,"dist=7621;dist=6486"]
[1,"poor","chr1",91419342,91419342,"T","G","intronic","PUM3"]
[1,"poor","chr1",91419349,91419349,"C","A","intronic","PUM3"]
[1,"poor","chr1",91422976,91422976,"A","G","intronic","PUM3"]
[1,"poor","chr1",91438448,91438448,"A","C","ncRNA_exonic","LOC111096836"]
[1,"poor","chr1",91438452,91438452,"A","T","ncRNA_exonic","LOC111096836"]
[1,"poor","chr1",91562798,91562798,"T","C","ncRNA_intronic","LOC102152101"]
[1,"poor","chr1",91684672,91684672,"A","C","intronic","LOC609469"]
[1,"poor","chr1",91734251,91734251,"G","A","intronic","LOC609469"]
[1,"poor","chr1",91758100,91758100,"C","CCTGTGAGGAGCCTGCT","intergenic","LOC609469;RFX3",null,"dist=16924;dist=15392"]
[1,"poor","chr1",91893971,91893975,"TAAAA","T","ncRNA_intronic","LOC111096943"]
[1,"poor","chr1",91952260,91952260,"G","A","intronic","RFX3"]
[1,"poor","chr1",91999244,91999244,"C","CT","intronic","RFX3"]
[1,"poor","chr1",91999245,91999245,"A","G","intronic","RFX3"]
[1,"poor","chr1",92004159,92004159,"A","ACAGG","intronic","RFX3"]
[1,"poor","chr1",92004170,92004170,"A","C","intronic","RFX3"]
[1,"poor","chr1",92104181,92104181,"C","G","intergenic","RFX3;LOC102152915",null,"dist=43286;dist=62206"]
[1,"poor","chr1",92104189,92104189,"C","CTGCTG","intergenic","RFX3;LOC102152915",null,"dist=43294;dist=62198"]
[1,"poor","chr1",92138374,92138374,"G","T","intergenic","RFX3;LOC102152915",null,"dist=77479;dist=28013"]
[1,"poor","chr1",92138378,92138378,"A","ACAG","intergenic","RFX3;LOC102152915",null,"dist=77483;dist=28009"]
[1,"poor","chr1",92139132,92139132,"G","GGGCT","intergenic","RFX3;LOC102152915",null,"dist=78237;dist=27255"]
[1,"poor","chr1",92139136,92139140,"AAGCC","A","intergenic","RFX3;LOC102152915",null,"dist=78241;dist=27247"]
[1,"poor","chr1",92158136,92158136,"C","A","intergenic","RFX3;LOC102152915",null,"dist=97241;dist=8251"]
[1,"poor","chr1",92158141,92158141,"G","C","intergenic","RFX3;LOC102152915",null,"dist=97246;dist=8246"]
[1,"poor","chr1",92215540,92215540,"G","C","intergenic","LOC102152915;GLIS3",null,"dist=44526;dist=62981"]
[1,"poor","chr1",92282741,92282745,"CAAGG","C","intronic","GLIS3"]
[1,"poor","chr1",92282746,92282746,"A","ATCCT","intronic","GLIS3"]
[1,"poor","chr1",92303300,92303300,"G","A","intronic","GLIS3"]
[1,"poor","chr1",92334228,92334228,"C","A","intronic","GLIS3"]
[1,"poor","chr1",92356529,92356529,"A","G","intronic","GLIS3"]
[1,"poor","chr1",92434541,92434541,"C","G","intronic","GLIS3"]
[1,"poor","chr1",92534615,92534615,"T","C","intronic","GLIS3"]
[1,"poor","chr1",92535760,92535760,"G","A","intronic","GLIS3"]
[1,"poor","chr1",92539796,92539796,"T","TC","intronic","GLIS3"]
[1,"poor","chr1",92742201,92742201,"T","C","intronic","GLIS3"]
[1,"poor","chr1",92773378,92773378,"G","GCCAA","intronic","GLIS3"]
[1,"poor","chr1",92773380,92773384,"CTTGG","C","intronic","GLIS3"]
[1,"poor","chr1",92999829,92999829,"G","A","intronic","SPATA6L"]
[1,"poor","chr1",93008332,93008332,"G","A","intronic","SPATA6L"]
[1,"poor","chr1",93143867,93143867,"G","A","upstream","RCL1",null,"dist=297"]
[1,"poor","chr1",93303993,93303993,"A","G","intergenic","LOC111096967;JAK2",null,"dist=84770;dist=17062"]
[1,"poor","chr1",93305855,93305855,"A","T","intergenic","LOC111096967;JAK2",null,"dist=86632;dist=15200"]
[1,"poor","chr1",93305866,93305866,"T","C","intergenic","LOC111096967;JAK2",null,"dist=86643;dist=15189"]
[1,"poor","chr1",93465432,93465432,"A","C","intronic","CD274;INSL6"]
[1,"poor","chr1",93465437,93465437,"G","T","intronic","CD274;INSL6"]
[1,"poor","chr1",93636699,93636699,"C","T","ncRNA_intronic","LOC100688720"]
[1,"poor","chr1",93642317,93642317,"C","G","ncRNA_intronic","LOC100688720"]
[1,"poor","chr1",93647902,93647903,"TA","T","intronic","PDCD1LG2"]
[1,"poor","chr1",93647905,93647905,"C","CT","intronic","PDCD1LG2"]
[1,"poor","chr1",93781306,93781307,"TG","T","intronic","RIC1"]
[1,"poor","chr1",93781309,93781309,"A","AC","intronic","RIC1"]
[1,"poor","chr1",93806781,93806781,"C","CGA","intronic","RIC1"]
[1,"poor","chr1",93806785,93806787,"ATC","A","intronic","RIC1"]
[1,"poor","chr1",93892239,93892239,"G","GCAGCCCAGGGGGAAAC","intronic","ERMP1"]
[1,"poor","chr1",93953732,93953732,"G","C","intronic","ERMP1"]
[1,"poor","chr1",93953737,93953737,"G","C","intronic","ERMP1"]
[1,"poor","chr1",93976589,93976589,"G","T","intronic","ERMP1"]
[1,"poor","chr1",93978474,93978474,"A","AGGGTTGTGAGAT","intronic","ERMP1"]
[1,"poor","chr1",93978478,93978478,"C","G","intronic","ERMP1"]
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[1,"poor","chr1",94035874,94035874,"A","G","intergenic","ERMP1;LOC102155374",null,"dist=27608;dist=62026"]
[1,"poor","chr1",94060551,94060551,"G","T","intergenic","ERMP1;LOC102155374",null,"dist=52285;dist=37349"]
[1,"poor","chr1",94060552,94060556,"GCACT","G","intergenic","ERMP1;LOC102155374",null,"dist=52286;dist=37344"]
[1,"poor","chr1",94069760,94069760,"G","A","intergenic","ERMP1;LOC102155374",null,"dist=61494;dist=28140"]
[1,"poor","chr1",94099264,94099264,"C","A","exonic","LOC102155374","NA",null,"stopgain","LOC102155374:XM_005615947.2:exon4:c.G2968T:p.G990X"]
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[1,"poor","chr1",94139760,94139760,"A","C","ncRNA_intronic","LOC111096991"]
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[1,"poor","chr1",94169656,94169656,"T","G","intergenic","LOC111096991;LOC111090786",null,"dist=21853;dist=17142"]
[1,"poor","chr1",94214168,94214169,"TA","T","intergenic","LOC111090786;LOC100687983",null,"dist=22504;dist=40963"]
[1,"poor","chr1",94214173,94214173,"C","CT","intergenic","LOC111090786;LOC100687983",null,"dist=22509;dist=40959"]
[1,"poor","chr1",94338070,94338070,"T","A","intergenic","LOC100687983;LOC609770",null,"dist=74973;dist=195017"]
[1,"poor","chr1",94381257,94381257,"C","G","intergenic","LOC100687983;LOC609770",null,"dist=118160;dist=151830"]
[1,"poor","chr1",94381263,94381263,"C","G","intergenic","LOC100687983;LOC609770",null,"dist=118166;dist=151824"]
[1,"poor","chr1",94381809,94381809,"A","G","intergenic","LOC100687983;LOC609770",null,"dist=118712;dist=151278"]
[1,"poor","chr1",94381810,94381810,"C","T","intergenic","LOC100687983;LOC609770",null,"dist=118713;dist=151277"]
[1,"poor","chr1",94403381,94403381,"C","T","intergenic","LOC100687983;LOC609770",null,"dist=140284;dist=129706"]
[1,"poor","chr1",94403386,94403386,"T","A","intergenic","LOC100687983;LOC609770",null,"dist=140289;dist=129701"]
[1,"poor","chr1",94626745,94626745,"A","G","intronic","LOC609770"]
[1,"poor","chr1",94651449,94651449,"G","GACCATGATCCTCAGA","intronic","LOC609770"]
[1,"poor","chr1",94651456,94651456,"T","C","intronic","LOC609770"]
[1,"poor","chr1",94677950,94677950,"G","A","intronic","LOC609770"]
[1,"poor","chr1",94677960,94677960,"C","G","intronic","LOC609770"]
[1,"poor","chr1",94805863,94805863,"G","A","intergenic","LOC111096995;LOC102155456",null,"dist=6478;dist=2521"]
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[1,"poor","chr1",94896557,94896557,"T","C","ncRNA_intronic","LOC111097000"]
[1,"poor","chr1",94933158,94933158,"A","G","ncRNA_intronic","LOC111097017"]
[1,"poor","chr1",94933165,94933165,"T","C","ncRNA_intronic","LOC111097017"]
[1,"poor","chr1",95028869,95028869,"T","TGGCCACCATCACAGAGATGA","intronic","SPTLC1"]
[1,"poor","chr1",95101036,95101036,"T","C","intergenic","SPTLC1;ROR2",null,"dist=38612;dist=108086"]
[1,"poor","chr1",95145650,95145650,"C","CCCATCCTGTCCACGGCTGGGGTCTCT","intergenic","SPTLC1;ROR2",null,"dist=83226;dist=63472"]
[1,"poor","chr1",95243895,95243895,"T","TCCAG","ncRNA_intronic","LOC111097025"]
[1,"poor","chr1",95243906,95243910,"TGCTG","T","ncRNA_intronic","LOC111097025"]
[1,"poor","chr1",95356390,95356390,"G","GGC","intergenic","ROR2;NFIL3",null,"dist=75434;dist=151834"]
[1,"poor","chr1",95356392,95356396,"TGGTG","T","intergenic","ROR2;NFIL3",null,"dist=75436;dist=151828"]
[1,"poor","chr1",95555885,95555885,"C","T","intronic","AUH"]
[1,"poor","chr1",95638582,95638594,"CCTCTCTCTCTCT","C","intronic","AUH"]
[1,"poor","chr1",95674606,95674606,"G","C","intronic","AUH"]
[1,"poor","chr1",95674613,95674613,"C","CAGCTG","intronic","AUH"]
[1,"poor","chr1",95820374,95820412,"ATGTGAGGGTGTGCATAGGCATACACTCGTGTACAGCAG","A","intergenic","AUH;SYK",null,"dist=112720;dist=83089"]
[1,"poor","chr1",95857096,95857096,"G","T","intergenic","AUH;SYK",null,"dist=149442;dist=46405"]
[1,"poor","chr1",95882255,95882255,"C","CTT","intergenic","AUH;SYK",null,"dist=174601;dist=21246"]
[1,"poor","chr1",95882258,95882260,"CAA","C","intergenic","AUH;SYK",null,"dist=174604;dist=21241"]
[1,"poor","chr1",95976663,95976663,"A","G","intergenic","SYK;DIRAS2",null,"dist=21086;dist=80932"]
[1,"poor","chr1",95989741,95989741,"G","T","intergenic","SYK;DIRAS2",null,"dist=34164;dist=67854"]
[1,"poor","chr1",95989742,95989742,"A","C","intergenic","SYK;DIRAS2",null,"dist=34165;dist=67853"]
[1,"poor","chr1",96024582,96024582,"C","A","intergenic","SYK;DIRAS2",null,"dist=69005;dist=33013"]
[1,"poor","chr1",96055020,96055020,"A","G","intergenic","SYK;DIRAS2",null,"dist=99443;dist=2575"]
[1,"poor","chr1",96059949,96059949,"T","C","ncRNA_exonic","LOC111097044"]
[1,"poor","chr1",96059950,96059950,"G","A","ncRNA_exonic","LOC111097044"]
[1,"poor","chr1",96110946,96110946,"G","C","intergenic","DIRAS2;LOC111097047",null,"dist=28883;dist=13646"]
[1,"poor","chr1",96118008,96118008,"A","G","intergenic","DIRAS2;LOC111097047",null,"dist=35945;dist=6584"]
[1,"poor","chr1",96184164,96184164,"G","A","intergenic","LOC102156486;LOC111090787",null,"dist=47099;dist=216890"]
[1,"poor","chr1",96199199,96199199,"T","TCCACTGAGATCATGATCTCAGTGGAAGGCAGATGCTCAA","intergenic","LOC102156486;LOC111090787",null,"dist=62134;dist=201855"]
[1,"poor","chr1",96230649,96230655,"CTTTTTT","C","intergenic","LOC102156486;LOC111090787",null,"dist=93584;dist=170399"]
[1,"poor","chr1",96256784,96256784,"G","A","intergenic","LOC102156486;LOC111090787",null,"dist=119719;dist=144270"]
[1,"poor","chr1",96311357,96311362,"TCTCCC","T","intergenic","LOC102156486;LOC111090787",null,"dist=174292;dist=89692"]
[1,"poor","chr1",96454997,96454997,"G","C","intergenic","LOC111090788;LOC111097050",null,"dist=34508;dist=27088"]
[1,"poor","chr1",96522335,96522335,"G","T","intergenic","LOC106559328;LOC111090789",null,"dist=12486;dist=18306"]
[1,"poor","chr1",96522336,96522336,"A","C","intergenic","LOC106559328;LOC111090789",null,"dist=12487;dist=18305"]
[1,"poor","chr1",96544535,96544535,"T","A","ncRNA_exonic","LOC111097055"]
[1,"poor","chr1",96563530,96563530,"C","CACAAGCCGACCGTCTTCCA","intergenic","LOC111097054;LOC102156616",null,"dist=8549;dist=25765"]
[1,"poor","chr1",96563992,96563992,"G","T","intergenic","LOC111097054;LOC102156616",null,"dist=9011;dist=25303"]
[1,"poor","chr1",96588330,96588330,"A","G","upstream","LOC102156616",null,"dist=965"]
[1,"poor","chr1",96630595,96630601,"TCTCTCA","T","intergenic","LOC102156616;LOC111090790",null,"dist=30614;dist=47378"]
[1,"poor","chr1",96636884,96636884,"G","A","intergenic","LOC102156616;LOC111090790",null,"dist=36903;dist=41095"]
[1,"poor","chr1",96682534,96682534,"A","G","intergenic","LOC111090790;LOC111097059",null,"dist=1247;dist=43315"]
[1,"poor","chr1",96782369,96782369,"T","A","intergenic","GADD45G;SEMA4D",null,"dist=35834;dist=43594"]
[1,"poor","chr1",96864214,96864214,"G","A","intronic","SEMA4D"]
[1,"poor","chr1",96893288,96893288,"A","G","intronic","SECISBP2"]
[1,"poor","chr1",96912879,96912879,"C","CCCCAGAGCCGGGCTACTGAGTACCAGACTCAGCAGCCCGGCTCTGGGGGCTCAGCACTGCTGCCTGCCA","intronic","SECISBP2"]
[1,"poor","chr1",96917345,96917363,"TATTTATTTTTTTTTTATA","T","intronic","SECISBP2"]
[1,"poor","chr1",96972726,96972746,"TGTCGACAGGTCCCTGACCTC","T","intergenic","LOC111097076;LOC111098877",null,"dist=37916;dist=6591"]
[1,"poor","chr1",97045134,97045134,"A","C","intronic","SHC3"]
[1,"poor","chr1",97090349,97090349,"C","T","intronic","SHC3"]
[1,"poor","chr1",97108676,97108676,"T","TTTCAAAACCTGGCAC","intergenic","S1PR3;SPIN1",null,"dist=1065;dist=244432"]
[1,"poor","chr1",97119516,97119516,"C","CAGAG","intergenic","S1PR3;SPIN1",null,"dist=11905;dist=233592"]
[1,"poor","chr1",97188709,97188709,"T","A","intergenic","S1PR3;SPIN1",null,"dist=81098;dist=164399"]
[1,"poor","chr1",97198238,97198238,"T","C","intergenic","S1PR3;SPIN1",null,"dist=90627;dist=154870"]
[1,"poor","chr1",97336977,97336977,"T","A","intergenic","S1PR3;SPIN1",null,"dist=229366;dist=16131"]
[1,"poor","chr1",97340643,97340643,"T","C","intergenic","S1PR3;SPIN1",null,"dist=233032;dist=12465"]
[1,"poor","chr1",97367185,97367185,"C","A","ncRNA_exonic","LOC102157320"]
[1,"poor","chr1",97367186,97367186,"T","G","ncRNA_exonic","LOC102157320"]
[1,"poor","chr1",97372222,97372222,"T","A","intronic","SPIN1"]
[1,"poor","chr1",97385290,97385290,"T","C","intronic","SPIN1"]
[1,"poor","chr1",97395003,97395003,"A","G","intronic","SPIN1"]
[1,"poor","chr1",97414590,97414595,"GCATCA","G","intronic","SPIN1"]
[1,"poor","chr1",97428715,97428715,"T","C","intergenic","SPIN1;LOC111097080",null,"dist=2152;dist=90617"]
[1,"poor","chr1",97451937,97451937,"G","A","intergenic","SPIN1;LOC111097080",null,"dist=25374;dist=67395"]
[1,"poor","chr1",97451938,97451938,"T","C","intergenic","SPIN1;LOC111097080",null,"dist=25375;dist=67394"]
[1,"poor","chr1",97523799,97523799,"G","A","ncRNA_intronic","LOC111097082"]
[1,"poor","chr1",97579164,97579164,"A","G","intergenic","LOC111097082;LOC102151309",null,"dist=26923;dist=8118"]
[1,"poor","chr1",97579564,97579564,"G","C","intergenic","LOC111097082;LOC102151309",null,"dist=27323;dist=7718"]
[1,"poor","chr1",97579565,97579565,"G","C","intergenic","LOC111097082;LOC102151309",null,"dist=27324;dist=7717"]
[1,"poor","chr1",97610565,97610565,"G","A","intergenic","LOC102151309;CDK20",null,"dist=15179;dist=12561"]
[1,"poor","chr1",97610576,97610576,"G","A","intergenic","LOC102151309;CDK20",null,"dist=15190;dist=12550"]
[1,"poor","chr1",97656000,97656000,"A","G","ncRNA_intronic","LOC111097104"]
[1,"poor","chr1",97708713,97708713,"A","G","ncRNA_intronic","LOC100684129"]
[1,"poor","chr1",97713764,97713764,"C","CTGTTGGGGA","intergenic","LOC100684129;NUTM2F",null,"dist=1576;dist=2343"]
[1,"poor","chr1",97713765,97713765,"C","CTGA","intergenic","LOC100684129;NUTM2F",null,"dist=1577;dist=2342"]
[1,"poor","chr1",97729820,97729820,"C","T","intergenic","LOC111090791;LOC111097110",null,"dist=6281;dist=2240"]
[1,"poor","chr1",97735802,97735802,"C","CAGGGGGCCAGAGGAGTCAG","intronic","LOC476356"]
[1,"poor","chr1",97810381,97810381,"A","G","downstream","ZNF169","NA","dist=747"]
[1,"poor","chr1",97817315,97817315,"C","T","intronic","ZNF169"]
[1,"poor","chr1",97822926,97822926,"C","T","intronic","ZNF169"]
[1,"poor","chr1",97822934,97822934,"T","TG","intronic","ZNF169"]
[1,"poor","chr1",97869768,97869768,"G","A","intronic","LOC102153346"]
[1,"poor","chr1",97869783,97869783,"C","T","intronic","LOC102153346"]
[1,"poor","chr1",97927636,97927641,"GCCTGC","G","intergenic","LOC102153346;PTPDC1",null,"dist=13855;dist=15264"]
[1,"poor","chr1",97969362,97969362,"C","T","intronic","PTPDC1"]
[1,"poor","chr1",98037364,98037364,"G","C","intronic","BARX1"]
[1,"poor","chr1",98037368,98037369,"GT","G","intronic","BARX1"]
[1,"poor","chr1",98134727,98134727,"T","C","intergenic","BARX1;PHF2",null,"dist=94909;dist=53287"]
[1,"poor","chr1",98141266,98141266,"T","C","intergenic","BARX1;PHF2",null,"dist=101448;dist=46748"]
[1,"poor","chr1",98141270,98141270,"C","T","intergenic","BARX1;PHF2",null,"dist=101452;dist=46744"]
[1,"poor","chr1",98175184,98175184,"C","A","intergenic","BARX1;PHF2",null,"dist=135366;dist=12830"]
[1,"poor","chr1",98199532,98199532,"G","T","intronic","PHF2"]
[1,"poor","chr1",98209472,98209472,"G","A","intronic","PHF2"]
[1,"poor","chr1",98218916,98218916,"G","A","intronic","PHF2"]
[1,"poor","chr1",98218920,98218920,"C","CAAGAGCTCCTGGGGCACCCG","intronic","PHF2"]
[1,"poor","chr1",98236311,98236311,"C","T","intronic","PHF2"]
[1,"poor","chr1",98339459,98339459,"G","A","intergenic","LOC610549;WNK2",null,"dist=2698;dist=94438"]
[1,"poor","chr1",98413673,98413673,"C","T","intergenic","LOC610549;WNK2",null,"dist=76912;dist=20224"]
[1,"poor","chr1",98455710,98455710,"G","A","intronic","WNK2","TOLERATED"]
[1,"poor","chr1",98513719,98513719,"C","T","intronic","WNK2"]
[1,"poor","chr1",98513722,98513722,"A","G","intronic","WNK2"]
[1,"poor","chr1",98539067,98539067,"C","G","intergenic","WNK2;NINJ1",null,"dist=5640;dist=27453"]
[1,"poor","chr1",98539075,98539078,"GCAT","G","intergenic","WNK2;NINJ1",null,"dist=5648;dist=27442"]
[1,"poor","chr1",98573903,98573903,"C","CTG","intronic","NINJ1"]
[1,"poor","chr1",98573911,98573913,"GCA","G","intronic","NINJ1"]
[1,"poor","chr1",98596422,98596422,"A","G","intergenic","CARD19;SUSD3",null,"dist=1324;dist=3516"]
[1,"poor","chr1",98648575,98648580,"GGAGAA","G","intronic","FGD3"]
[1,"poor","chr1",98729169,98729169,"C","CCTGCACAAAGGGG","intronic","BICD2"]
[1,"poor","chr1",98831514,98831514,"A","G","intronic","CENPP"]
[1,"poor","chr1",98969255,98969255,"G","GACCTAGGA","intronic","CENPP"]
[1,"poor","chr1",98980475,98980475,"G","A","intronic","CENPP"]
[1,"poor","chr1",98980476,98980476,"T","C","intronic","CENPP"]
[1,"poor","chr1",99023018,99023018,"A","G","intronic","NOL8"]
[1,"poor","chr1",99023019,99023019,"G","A","intronic","NOL8"]
[1,"poor","chr1",99029608,99029608,"C","A","intronic","NOL8"]
[1,"poor","chr1",99314097,99314097,"C","T","ncRNA_intronic","LOC111097189"]
[1,"poor","chr1",99332136,99332147,"TCTACCTTCTTC","T","ncRNA_intronic","LOC111097189"]
[1,"poor","chr1",99353785,99353785,"C","T","intergenic","LOC111097189;LOC100856086",null,"dist=3059;dist=24543"]
[1,"poor","chr1",99353794,99353794,"T","G","intergenic","LOC111097189;LOC100856086",null,"dist=3068;dist=24534"]
[1,"poor","chr1",99443659,99443659,"G","GT","intronic","ZNF446"]
[1,"poor","chr1",99443665,99443666,"TA","T","intronic","ZNF446"]
[1,"poor","chr1",99466602,99466602,"A","G","intergenic","ZNF324;ZNF132",null,"dist=11357;dist=7116"]
[1,"poor","chr1",99587857,99588025,"TGGCGCACGCACACCGGCGAGCAGCCCTACGCCTGCCCCGACTACAGCAAGGCCTTCTGCGGCAGCTCTGAGCTGCACCGGCCCCAGGGTGTGCACTCTGGGGAGAAGCCGTTTGTCTGCACCGACTGCGGCAAAGCTTTTGTGGGCAACTCTGAGCTCTTGAGCCACC","T","intergenic","LOC111098716;A1BG","NA","dist=5262;dist=5629"]
[1,"poor","chr1",99729208,99729208,"T","C","ncRNA_intronic","LOC102154338"]
[1,"poor","chr1",99729217,99729217,"G","A","ncRNA_intronic","LOC102154338"]
[1,"poor","chr1",99792934,99792934,"G","A","intronic","ZSCAN18"]
[1,"poor","chr1",99792935,99792935,"T","C","intronic","ZSCAN18"]
[1,"poor","chr1",99810432,99810433,"AT","A","intronic","ZSCAN18"]
[1,"poor","chr1",99810450,99810462,"TTATTTATTTTTG","T","intronic","ZSCAN18"]
[1,"poor","chr1",99857050,99857050,"A","G","intergenic","ZSCAN1;ZNF606",null,"dist=3177;dist=34815"]
[1,"poor","chr1",99857051,99857051,"A","G","intergenic","ZSCAN1;ZNF606",null,"dist=3178;dist=34814"]
[1,"poor","chr1",99858260,99858260,"C","CAAAAAG","intergenic","ZSCAN1;ZNF606",null,"dist=4387;dist=33605"]
[1,"poor","chr1",99858263,99858263,"C","G","intergenic","ZSCAN1;ZNF606",null,"dist=4390;dist=33602"]
[1,"poor","chr1",99885747,99885747,"C","T","intergenic","ZSCAN1;ZNF606",null,"dist=31874;dist=6118"]
[1,"poor","chr1",99898710,99898710,"T","A","UTR3","ZNF606",null,"XM_022426705.1:c.*1602T>A"]
[1,"poor","chr1",99916235,99916235,"T","TG","UTR3","ZNF606",null,"XM_014114437.2:c.*1885T>TG;XM_022426701.1:c.*1885T>TG;XM_014114430.2:c.*1885T>TG"]
[1,"poor","chr1",99916240,99916240,"A","G","UTR3","ZNF606",null,"XM_014114437.2:c.*1890A>G;XM_022426701.1:c.*1890A>G;XM_014114430.2:c.*1890A>G"]
[1,"poor","chr1",99944882,99944882,"C","CTT","intergenic","C1H19orf18;LOC102152916",null,"dist=5503;dist=6521"]
[1,"poor","chr1",99959715,99959715,"A","T","intronic","LOC102152916"]
[1,"poor","chr1",100169863,100169863,"G","C","intergenic","LOC102152102;LOC102152013",null,"dist=10326;dist=2684"]
[1,"poor","chr1",100169867,100169867,"C","G","intergenic","LOC102152102;LOC102152013",null,"dist=10330;dist=2680"]
[1,"poor","chr1",100226909,100226909,"G","T","intergenic","LOC111098717;LOC102151838",null,"dist=5452;dist=23349"]
[1,"poor","chr1",100236706,100236711,"GTTTTT","G","intergenic","LOC111098717;LOC102151838",null,"dist=15249;dist=13547"]
[1,"poor","chr1",100361972,100361972,"T","TCTCTCCCTCCCTCCGTCCCC","intergenic","LOC100684902;LOC610960",null,"dist=9874;dist=6182"]
[1,"poor","chr1",100370106,100370106,"T","A","intronic","LOC610960"]
[1,"poor","chr1",100518612,100518612,"T","A","exonic","ZNF550","TOLERATED",null,"nonsynonymous SNV","ZNF550:XM_005616075.3:exon4:c.T1241A:p.L414Q"]
[1,"poor","chr1",100568651,100568651,"T","C","intronic","LOC100685462;LOC491462"]
[1,"poor","chr1",100609143,100609143,"T","C","intergenic","LOC100685539;LOC106558942",null,"dist=5621;dist=10564"]
[1,"poor","chr1",100647559,100647559,"C","G","intronic","LOC106558942"]
[1,"poor","chr1",100692504,100692504,"G","A","intronic","LOC106558942"]
[1,"poor","chr1",100703517,100703517,"A","T","intronic","LOC100685630"]
[1,"poor","chr1",100840204,100840206,"GGT","G","intronic","LOC102155336"]
[1,"poor","chr1",100840322,100840322,"C","CCTCT","intronic","LOC102155336"]
[1,"poor","chr1",100840324,100840328,"TAGAG","T","intronic","LOC102155336"]
[1,"poor","chr1",100915468,100915468,"C","A","intergenic","LOC102155336;LOC111090800",null,"dist=49115;dist=20197"]
[1,"poor","chr1",100915470,100915470,"T","TGG","intergenic","LOC102155336;LOC111090800",null,"dist=49117;dist=20195"]
[1,"poor","chr1",101123912,101123912,"A","T","downstream","PEG3",null,"dist=360"]
[1,"poor","chr1",101123913,101123913,"A","T","downstream","PEG3",null,"dist=361"]
[1,"poor","chr1",101139467,101139467,"G","C","intronic","LOC102156157"]
[1,"poor","chr1",101195422,101195422,"G","A","intergenic","ZIM2;LOC102154596",null,"dist=9101;dist=61699"]
[1,"poor","chr1",101218319,101218319,"T","A","intergenic","ZIM2;LOC102154596",null,"dist=31998;dist=38802"]
[1,"poor","chr1",101218322,101218322,"T","A","intergenic","ZIM2;LOC102154596",null,"dist=32001;dist=38799"]
[1,"poor","chr1",101236355,101236355,"C","CA","intergenic","ZIM2;LOC102154596",null,"dist=50034;dist=20766"]
[1,"poor","chr1",101254212,101254212,"T","TG","intergenic","ZIM2;LOC102154596",null,"dist=67891;dist=2909"]
[1,"poor","chr1",101254214,101254215,"AC","A","intergenic","ZIM2;LOC102154596",null,"dist=67893;dist=2906"]
[1,"poor","chr1",101285933,101285933,"T","TCC","intergenic","LOC102154754;LOC102154839",null,"dist=1204;dist=6817"]
[1,"poor","chr1",101394499,101394499,"T","TCCTCTTCCATTACCAGGGA","intronic","LOC102154915"]
[1,"poor","chr1",101394505,101394505,"G","A","intronic","LOC102154915"]
[1,"poor","chr1",101428044,101428044,"T","C","intronic","LOC608859"]
[1,"poor","chr1",101615406,101615406,"A","C","intronic","ZNF667"]
[1,"poor","chr1",101615407,101615407,"C","CCCAGCCAGGTCA","intronic","ZNF667"]
[1,"poor","chr1",101622934,101622934,"C","A","intronic","ZNF667"]
[1,"poor","chr1",101643752,101643752,"T","C","ncRNA_intronic","LOC106558975"]
[1,"poor","chr1",101647287,101647287,"T","A","ncRNA_intronic","LOC106558975"]
[1,"poor","chr1",101835131,101835131,"G","C","intronic","NLRP5"]
[1,"poor","chr1",101867279,101867279,"A","C","intronic","NLRP8"]
[1,"poor","chr1",101867284,101867284,"G","T","intronic","NLRP8"]
[1,"poor","chr1",101916973,101916973,"G","T","intronic","NLRP13"]
[1,"poor","chr1",101932378,101932378,"T","C","intergenic","NLRP13;LOC102155284",null,"dist=10467;dist=36591"]
[1,"poor","chr1",101932385,101932385,"T","G","intergenic","NLRP13;LOC102155284",null,"dist=10474;dist=36584"]
[1,"poor","chr1",101949344,101949344,"G","C","intergenic","NLRP13;LOC102155284",null,"dist=27433;dist=19625"]
[1,"poor","chr1",101953036,101953036,"A","G","intergenic","NLRP13;LOC102155284",null,"dist=31125;dist=15933"]
[1,"poor","chr1",101968938,101968938,"T","C","downstream","LOC102155284",null,"dist=31"]
[1,"poor","chr1",102121109,102121109,"C","CCTTCACAGGACA","downstream","ZNF865",null,"dist=334"]
[1,"poor","chr1",102121113,102121113,"T","G","downstream","ZNF865",null,"dist=330"]
[1,"poor","chr1",102181798,102181798,"T","G","UTR3","LOC611270","NA","XM_014118242.2:c.*9T>G;XM_014118238.2:c.*9T>G;XM_848917.5:c.*9T>G"]
[1,"poor","chr1",102268485,102268485,"T","A","UTR3","SHISA7","NA","XM_022403816.1:c.*306T>A"]
[1,"poor","chr1",102268493,102268499,"GGGACAA","G","UTR3","SHISA7","NA","XM_022403816.1:c.*314_*320delinsG"]
[1,"poor","chr1",102280721,102280721,"G","A","intergenic","SHISA7;UBE2S",null,"dist=10333;dist=2450"]
[1,"poor","chr1",102280724,102280724,"C","CTGCTGAGCCCCT","intergenic","SHISA7;UBE2S",null,"dist=10336;dist=2447"]
[1,"poor","chr1",102323378,102323378,"G","GCACCTTCCGAGACGGGC","exonic","FAM71E2",null,null,"frameshift substitution","FAM71E2:XM_022427198.1:exon9:c.1367delinsGCACCTTCCGAGACGGGC:p.P457Tfs*102,FAM71E2:XM_022427201.1:exon9:c.1367delinsGCACCTTCCGAGACGGGC:p.P457Tfs*102,FAM71E2:XM_022427204.1:exon9:c.1163delinsGCACCTTCCGAGACGGGC:p.P389Tfs*102"]
[1,"poor","chr1",102323384,102323384,"C","G","exonic","FAM71E2","-",null,"nonsynonymous SNV","FAM71E2:XM_022427198.1:exon9:c.C1373G:p.S458C,FAM71E2:XM_022427201.1:exon9:c.C1373G:p.S458C,FAM71E2:XM_022427204.1:exon9:c.C1169G:p.S390C"]
[1,"poor","chr1",102384350,102384350,"A","AGGAG","intronic","BRSK1"]
[1,"poor","chr1",102384354,102384354,"C","CTCAGGCT","intronic","BRSK1"]
[1,"poor","chr1",102392867,102392867,"T","A","intronic","HSPBP1"]
[1,"poor","chr1",102392871,102392871,"T","TGGTGG","intronic","HSPBP1"]
[1,"poor","chr1",102424257,102424257,"A","G","intronic","PPP6R1"]
[1,"poor","chr1",102476407,102476407,"C","T","intronic","TNNI3"]
[1,"poor","chr1",102511026,102511026,"C","CACTGGCCCAGCCTCCA","intronic","PPP1R12C"]
[1,"poor","chr1",102543214,102543214,"T","C","intronic","RDH13"]
[1,"poor","chr1",102543215,102543215,"G","A","intronic","RDH13"]
[1,"poor","chr1",102543981,102543981,"C","T","intronic","RDH13"]
[1,"poor","chr1",102543982,102543982,"A","G","intronic","RDH13"]
[1,"poor","chr1",102557904,102557904,"T","A","intergenic","RDH13;GP6",null,"dist=5155;dist=28325"]
[1,"poor","chr1",102565895,102565897,"CGA","C","intergenic","RDH13;GP6",null,"dist=13146;dist=20332"]
[1,"poor","chr1",102565899,102565899,"G","C","intergenic","RDH13;GP6",null,"dist=13150;dist=20330"]
[1,"poor","chr1",102599552,102599552,"C","T","intronic","GP6"]
[1,"poor","chr1",102643880,102643880,"C","A","intergenic","NLRP2;NCR1",null,"dist=6501;dist=42178"]
[1,"poor","chr1",102643881,102643881,"T","G","intergenic","NLRP2;NCR1",null,"dist=6502;dist=42177"]
[1,"poor","chr1",102749000,102749000,"C","T","intergenic","FCAR;LOC484306",null,"dist=28320;dist=30562"]
[1,"poor","chr1",102749001,102749001,"T","G","intergenic","FCAR;LOC484306",null,"dist=28321;dist=30561"]
[1,"poor","chr1",102749466,102749466,"G","A","intergenic","FCAR;LOC484306",null,"dist=28786;dist=30096"]
[1,"poor","chr1",102770352,102770352,"A","G","intergenic","FCAR;LOC484306",null,"dist=49672;dist=9210"]
[1,"poor","chr1",102773829,102773829,"A","G","intergenic","FCAR;LOC484306",null,"dist=53149;dist=5733"]
[1,"poor","chr1",102782577,102782577,"C","CCTCAGGGTCTGCAGCCCTGAGGGAG","intronic","LOC484306"]
[1,"poor","chr1",102826474,102826474,"T","A","intergenic","LOC484306;CDC42EP5",null,"dist=39550;dist=11689"]
[1,"poor","chr1",102826481,102826481,"T","TCCTAG","intergenic","LOC484306;CDC42EP5",null,"dist=39557;dist=11682"]
[1,"poor","chr1",102835310,102835310,"T","TCATGACCTGAACGA","intergenic","LOC484306;CDC42EP5",null,"dist=48386;dist=2853"]
[1,"poor","chr1",102874433,102874433,"A","T","intronic","TTYH1"]
[1,"poor","chr1",102874439,102874439,"A","T","intronic","TTYH1"]
[1,"poor","chr1",102905614,102905614,"G","GAA","intergenic","TTYH1;LAIR1",null,"dist=29551;dist=8178"]
[1,"poor","chr1",103122928,103122928,"T","C","intronic","LOC106559612"]
[1,"poor","chr1",103153056,103153056,"C","CATGCTGGGAGCCCGACA","intergenic","LOC106559612;LOC484314",null,"dist=18777;dist=28996"]
[1,"poor","chr1",103184839,103184839,"C","T","exonic","LOC484314","TOLERATED",null,"nonsynonymous SNV","LOC484314:XM_005616130.3:exon2:c.G256A:p.E86K,LOC484314:XM_005616132.3:exon3:c.G292A:p.E98K,LOC484314:XM_014118565.2:exon3:c.G292A:p.E98K,LOC484314:XM_022427560.1:exon3:c.G277A:p.E93K,LOC484314:XM_022427566.1:exon3:c.G277A:p.E93K,LOC484314:XM_541430.6:exon3:c.G292A:p.E98K"]
[1,"poor","chr1",103215460,103215460,"C","A","downstream","LOC611492",null,"dist=458"]
[1,"poor","chr1",103215467,103215467,"T","G","downstream","LOC611492",null,"dist=465"]
[1,"poor","chr1",103819224,103819224,"G","T","intergenic","LOC106559263;LOC106559647",null,"dist=25488;dist=12842"]
[1,"poor","chr1",103821553,103821553,"G","C","intergenic","LOC106559263;LOC106559647",null,"dist=27817;dist=10513"]
[1,"poor","chr1",103993079,103993079,"G","C","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",103993090,103993090,"C","CTGCTTCTCCCTCTCCCTCTGCAGTTCCCCTTGCTTGCGCT","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",104017884,104017884,"A","T","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",104021900,104021900,"G","A","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",104049938,104049938,"C","T","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",104049958,104049958,"C","G","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",104090562,104090562,"T","C","ncRNA_intronic","LOC100683760;LOC111099009"]
[1,"poor","chr1",104102727,104102727,"T","C","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",104102791,104102791,"G","A","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",104103566,104103566,"C","T","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",104107166,104107166,"G","A","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",104107183,104107183,"T","C","ncRNA_intronic","LOC100683760"]
[1,"poor","chr1",104107450,104107450,"G","T","ncRNA_exonic","LOC100683760","DELETERIOUS"]
[1,"poor","chr1",104108733,104108733,"C","G","ncRNA_exonic","LOC100683760","TOLERATED"]
[1,"poor","chr1",104115924,104115924,"T","C","intergenic","LOC100683760;LOC102151818",null,"dist=1667;dist=111405"]
[1,"poor","chr1",104116300,104116300,"A","G","intergenic","LOC100683760;LOC102151818",null,"dist=2043;dist=111029"]
[1,"poor","chr1",104116302,104116302,"G","A","intergenic","LOC100683760;LOC102151818",null,"dist=2045;dist=111027"]
[1,"poor","chr1",104117491,104117491,"C","T","intergenic","LOC100683760;LOC102151818",null,"dist=3234;dist=109838"]
[1,"poor","chr1",104120514,104120514,"G","A","intergenic","LOC100683760;LOC102151818",null,"dist=6257;dist=106815"]
[1,"poor","chr1",104138573,104138573,"T","C","intergenic","LOC100683760;LOC102151818",null,"dist=24316;dist=88756"]
[1,"poor","chr1",104138889,104138889,"G","T","intergenic","LOC100683760;LOC102151818",null,"dist=24632;dist=88440"]
[1,"poor","chr1",104139322,104139322,"A","T","intergenic","LOC100683760;LOC102151818",null,"dist=25065;dist=88007"]
[1,"poor","chr1",104140067,104140067,"G","A","intergenic","LOC100683760;LOC102151818",null,"dist=25810;dist=87262"]
[1,"poor","chr1",104146931,104146931,"A","G","intergenic","LOC100683760;LOC102151818",null,"dist=32674;dist=80398"]
[1,"poor","chr1",104158872,104158872,"G","A","intergenic","LOC100683760;LOC102151818","TOLERATED","dist=44615;dist=68457"]
[1,"poor","chr1",104163362,104163362,"A","T","intergenic","LOC100683760;LOC102151818","NA","dist=49105;dist=63967"]
[1,"poor","chr1",104163383,104163383,"G","T","intergenic","LOC100683760;LOC102151818","NA","dist=49126;dist=63946"]
[1,"poor","chr1",104180688,104180688,"A","T","intergenic","LOC100683760;LOC102151818",null,"dist=66431;dist=46641"]
[1,"poor","chr1",104307201,104307201,"C","CTTT","intronic","LOC102151565"]
[1,"poor","chr1",104307202,104307202,"A","T","intronic","LOC102151565"]
[1,"poor","chr1",104319791,104319791,"A","C","intronic","LOC106559035"]
[1,"poor","chr1",104319811,104319811,"G","A","intronic","LOC106559035"]
[1,"poor","chr1",104320825,104320830,"TTTTTA","T","intronic","LOC106559035"]
[1,"poor","chr1",104328662,104328662,"C","T","intronic","LOC106559035"]
[1,"poor","chr1",104333560,104333560,"A","C","intronic","LOC106559035"]
[1,"poor","chr1",104333652,104333652,"G","A","intronic","LOC106559035"]
[1,"poor","chr1",104335921,104335921,"T","A","intronic","LOC106559035"]
[1,"poor","chr1",106616520,106616520,"G","A","upstream","SIGLEC11",null,"dist=721"]
[1,"poor","chr1",118416146,118416146,"T","C","intergenic","LOC111098310;KCTD15",null,"dist=29530;dist=5564"]
[1,"poor","chr10",16964348,16964348,"C","G","exonic","PLXNB2","TOLERATED",null,"nonsynonymous SNV","PLXNB2:XM_022424251.1:exon3:c.C940G:p.L314V"]
[1,"poor","chr10",19100786,19100786,"G","A","intergenic","LOC102151247;TBC1D22A",null,"dist=604655;dist=96080"]
[1,"poor","chr10",37639769,37639769,"A","G","intronic","NCK2"]
[1,"poor","chr10",47193572,47193572,"A","G","intergenic","CAMKMT;LOC111097845",null,"dist=7621;dist=21502"]
[1,"poor","chr10",69227706,69227706,"C","T","intergenic","CD207;VAX2",null,"dist=37417;dist=25220"]
[1,"poor","chr11",20433975,20433975,"T","C","intergenic","CSF2;P4HA2",null,"dist=87016;dist=81007"]
[1,"poor","chr11",22820871,22820871,"G","GTTGTTCC","exonic","CAMLG","NA",null,"frameshift substitution","CAMLG:XM_531910.6:exon2:c.275delinsGTTGTTCC:p.I93Cfs*7"]
[1,"poor","chr11",51386424,51386424,"C","T","intergenic","CCL21;LOC100682618",null,"dist=10634;dist=4063"]
[1,"poor","chr11",59716060,59716060,"T","A","intergenic","LOC111098112;LOC111097955",null,"dist=352768;dist=331951"]
[1,"poor","chr12",3227436,3227436,"G","A","upstream","LOC102156105",null,"dist=963"]
[1,"poor","chr12",10311705,10311705,"G","C","intergenic","FOXP4;MDFI",null,"dist=18813;dist=12794"]
[1,"poor","chr12",39505798,39505798,"C","A","intergenic","LOC111098326;LOC111098325",null,"dist=19908;dist=43417"]
[1,"poor","chr12",65799273,65799278,"GATGTC","G","ncRNA_intronic","LOC111098390"]
[1,"poor","chr13",1517883,1517883,"G","GTGAGCCCTCTTAGT","intronic","VPS13B"]
[1,"poor","chr13",17290027,17290027,"A","G","intronic","EXT1"]
[1,"poor","chr13",25172769,25172769,"A","T","intergenic","LOC111098447;LOC111098448",null,"dist=45887;dist=22958"]
[1,"poor","chr13",42447116,42447116,"C","T","intronic","GABRA2"]
[1,"poor","chr13",62842232,62842232,"T","A","intergenic","EPGN;EREG",null,"dist=30651;dist=15093"]
[1,"poor","chr14",6356631,6356631,"G","A","intronic","COPG2"]
[1,"poor","chr14",31691441,31691441,"A","G","intergenic","LOC111098675;AHR",null,"dist=319729;dist=52263"]
[1,"poor","chr14",41099296,41099296,"C","A","intronic","JAZF1"]
[1,"poor","chr15",5289148,5289152,"CTGTG","C","intergenic","LOC111098955;GRIK3",null,"dist=100172;dist=42594"]
[1,"poor","chr15",18974794,18974794,"T","C","intergenic","LOC111098887;PHLDA1",null,"dist=48490;dist=152577"]
[1,"poor","chr15",31676916,31676916,"T","TA","intronic","EPYC"]
[1,"poor","chr15",61999399,61999399,"G","A","intergenic","TLL1;LOC102152603",null,"dist=54334;dist=106202"]
[1,"poor","chr16",945755,945755,"G","GCCCCGGGCAGGGGCACCCGTCTGT","intergenic","LOC111090203;LOC106559836",null,"dist=418344;dist=61064"]
[1,"poor","chr16",21906906,21906906,"T","TA","intronic","PSD3"]
[1,"poor","chr16",40719994,40719994,"A","T","intronic","MTMR7"]
[1,"poor","chr16",49113091,49113091,"T","G","intergenic","LOC111090352;LOC111090184",null,"dist=430890;dist=100924"]
[1,"poor","chr16",55080913,55080913,"G","A","intergenic","LOC111090192;CSMD1",null,"dist=158901;dist=62077"]
[1,"poor","chr19",21988764,21988764,"A","G","intergenic","LOC111091051;LOC111091130",null,"dist=453351;dist=55841"]
[1,"poor","chr19",49011822,49011822,"A","ACATC","ncRNA_intronic","LOC111091196"]
[1,"poor","chr2",4311902,4311902,"A","G","intergenic","LOC102157036;LOC102156990",null,"dist=7909;dist=50086"]
[1,"poor","chr2",23224624,23224624,"G","A","downstream","LOC607509",null,"dist=839"]
[1,"poor","chr2",31551645,31551645,"C","T","ncRNA_exonic","LOC102156436"]
[1,"poor","chr2",49324827,49324827,"T","C","intergenic","LOC100688221;LOC111094653",null,"dist=60866;dist=472928"]
[1,"poor","chr2",69722963,69722963,"G","T","intronic","SNRNP40"]
[1,"poor","chr2",75738421,75738421,"G","GCAGTCCC","intronic","ELOA"]
[1,"poor","chr20",3945291,3945291,"T","A","intergenic","FBLN2;LOC111091226",null,"dist=10232;dist=5979"]
[1,"poor","chr20",9545705,9545706,"TC","T","intronic","LMCD1"]
[1,"poor","chr20",29735112,29735112,"A","G","upstream","FHIT",null,"dist=268"]
[1,"poor","chr20",45963904,45963904,"A","C","intronic","MED26"]
[1,"poor","chr20",51626207,51626207,"T","C","exonic","LOC484982","TOLERATED",null,"synonymous SNV","LOC484982:XM_005632923.1:exon1:c.T676C:p.L226L"]
[1,"poor","chr21",7171001,7171001,"T","TA","intergenic","LOC111091485;DEUP1",null,"dist=72139;dist=38523"]
[1,"poor","chr21",16745459,16745459,"A","C","intergenic","LOC111091603;LOC100685935",null,"dist=111573;dist=240641"]
[1,"poor","chr21",38067872,38067876,"CTATT","C","intergenic","INSC;LOC111091612",null,"dist=4182;dist=49150"]
[1,"poor","chr21",50431265,50431265,"G","A","ncRNA_intronic","LOC111091592"]
[1,"poor","chr22",21458284,21458284,"T","G","intronic","PCDH9"]
[1,"poor","chr22",47110335,47110335,"T","C","intergenic","UGGT2;LOC111091690",null,"dist=518740;dist=143046"]
[1,"poor","chr22",57649955,57649955,"T","C","intronic","MYO16"]
[1,"poor","chr23",17776045,17776045,"C","A","intergenic","LOC102156347;OXSM",null,"dist=20237;dist=258487"]
[1,"poor","chr23",20530848,20530848,"C","A","intronic","UBE2E2"]
[1,"poor","chr23",46687620,46687620,"A","G","intergenic","LOC111091866;MBNL1",null,"dist=79110;dist=10135"]
[1,"poor","chr24",12706699,12706701,"TTG","T","intergenic","LAMP5;PLCB4",null,"dist=12852;dist=43930"]
[1,"poor","chr24",20782556,20782558,"GGC","G","intergenic","DEFB125;DEFB116",null,"dist=24989;dist=50496"]
[1,"poor","chr24",41664593,41664593,"A","G","upstream","RTFDC1",null,"dist=666"]
[1,"poor","chr24",43936011,43936011,"C","CTTGCT","intronic","ZNF831"]
[1,"poor","chr25",19850339,19850339,"T","C","intronic","LOC477353"]
[1,"poor","chr25",30002779,30002779,"A","C","intergenic","CLU;LOC486100",null,"dist=3214;dist=5109"]
[1,"poor","chr25",48997054,48997054,"C","T","intergenic","MIR8822;LOC111092420",null,"dist=125129;dist=39163"]
[1,"poor","chr26",14000687,14000687,"G","T","intronic","KSR2"]
[1,"poor","chr26",16240891,16240891,"A","C","intronic","SIRT4"]
[1,"poor","chr26",27921319,27921319,"C","A","intronic","BCR"]
[1,"poor","chr26",36836360,36836360,"G","T","intronic","PRKG1"]
[1,"poor","chr27",16617674,16617674,"A","T","intronic","BICD1"]
[1,"poor","chr27",40679699,40679699,"T","C","intergenic","LOC111092875;TMA7",null,"dist=1250;dist=34166"]
[1,"poor","chr28",2544233,2544233,"A","T","intergenic","TMEM72;LOC111093011",null,"dist=15287;dist=185942"]
[1,"poor","chr28",20714244,20714244,"A","G","intergenic","LOC111092988;LOC111093026",null,"dist=182669;dist=530170"]
[1,"poor","chr28",29344462,29344462,"C","A","intronic","FAM45A"]
[1,"poor","chr29",2815110,2815110,"G","C","intronic","SNTG1"]
[1,"poor","chr29",12324183,12324183,"A","T","intergenic","ASPH;LOC102153180",null,"dist=301428;dist=116000"]
[1,"poor","chr3",54684,54684,"T","G","intergenic","REEP5;LOC111094958",null,"dist=28844;dist=173895"]
[1,"poor","chr3",27002851,27002851,"T","C","intergenic","THBS4;MTX3",null,"dist=20627;dist=22500"]
[1,"poor","chr3",35470950,35470950,"T","C","intergenic","UBE3A;LOC102157351",null,"dist=28621;dist=67129"]
[1,"poor","chr3",52670451,52670451,"C","G","UTR5","PLIN1",null,"XM_005618355.3:c.-112G>C;XM_005618356.3:c.-112G>C"]
[1,"poor","chr3",59100289,59100289,"T","TG","intergenic","TBC1D14;CCDC96",null,"dist=2708;dist=4824"]
[1,"poor","chr3",87483929,87483929,"C","CCCAGGGCGTGA","intergenic","ADGRA3;LOC111095319",null,"dist=48578;dist=75809"]
[1,"poor","chr31",13595806,13595806,"C","A","intergenic","LOC102154980;LOC106558101",null,"dist=62708;dist=14745"]
[1,"poor","chr31",26386739,26386739,"A","T","intronic","TIAM1"]
[1,"poor","chr31",39643298,39643298,"C","CGGCCCACCTGGGGGTCTCTGACCTGGCCCTGGGTGGCCGA","exonic","PCNT","NA",null,"frameshift substitution","PCNT:XM_022413353.1:exon29:c.5534delinsCGGCCCACCTGGGGGTCTCTGACCTGGCCCTGGGTGGCCGA:p.T1847Hfs*28,PCNT:XM_022413352.1:exon30:c.5567delinsCGGCCCACCTGGGGGTCTCTGACCTGGCCCTGGGTGGCCGA:p.T1858Hfs*28,PCNT:XM_022413354.1:exon30:c.5567delinsCGGCCCACCTGGGGGTCTCTGACCTGGCCCTGGGTGGCCGA:p.T1858Hfs*28"]
[1,"poor","chr32",1376049,1376049,"A","C","intronic","SHROOM3"]
[1,"poor","chr32",33687518,33687518,"G","GGTCTAAAGGTCACTTTGAAAACAATGGCAGGCTCCTGCTCTACCCCAAGACCCCCTTGAAAAGGCAATCATGCTCCAATGACGTTTTCCGGTCTCTGGTAGGGCCCCTCCTGGGCCAGTCC","intronic","ARSJ"]
[1,"poor","chr33",19131501,19131501,"G","A","ncRNA_intronic","LOC487987"]
[1,"poor","chr33",28578697,28578697,"A","G","intronic","OSBPL11"]
[1,"poor","chr34",4331289,4331289,"T","C","intergenic","LOC111093897;LOC111093915",null,"dist=77091;dist=13289"]
[1,"poor","chr34",20712932,20712932,"C","T","intronic","LPP"]
[1,"poor","chr35",9554691,9554691,"C","A","intronic","LOC609660"]
[1,"poor","chr35",18354707,18354707,"A","T","intergenic","LOC106558272;ID4",null,"dist=20252;dist=3044"]
[1,"poor","chr36",12345989,12345989,"G","C","intronic","B3GALT1"]
[1,"poor","chr36",22321411,22321411,"T","A","intronic","TTN"]
[1,"poor","chr38",17082468,17082468,"G","T","intergenic","LOC111094556;LOC111094551",null,"dist=30997;dist=2693"]
[1,"poor","chr4",14825779,14825779,"T","C","intergenic","EGR2;LOC111095705",null,"dist=15649;dist=32939"]
[1,"poor","chr4",22591242,22591242,"G","GCTTGTCTCTGACTCTGGGAAGCAAAGCACACAGGTGTGTT","intronic","PSAP"]
[1,"poor","chr4",40189461,40189461,"T","A","ncRNA_intronic","LOC102156729"]
[1,"poor","chr4",58571122,58571122,"A","ACCAGCCGAGGAGCATTGGCTCC","intergenic","SYNPO;NDST1",null,"dist=21782;dist=9109"]
[1,"poor","chr4",72071931,72071931,"A","G","intergenic","SLC1A3;RANBP3L",null,"dist=57812;dist=176783"]
[1,"poor","chr5",8521497,8521501,"TTAAA","T","intronic","CDON"]
[1,"poor","chr5",15671016,15671016,"T","C","intergenic","TMPRSS4;IL10RA",null,"dist=61197;dist=4759"]
[1,"poor","chr5",30882151,30882151,"T","TAGC","intergenic","AIPL1;LOC102156228",null,"dist=47126;dist=1187"]
[1,"poor","chr5",35440293,35440293,"T","A","intronic","SHISA6"]
[1,"poor","chr5",55585512,55585512,"G","A","intergenic","LOC111095955;LRP8",null,"dist=87648;dist=19366"]
[1,"poor","chr5",69925745,69925745,"G","T","intergenic","MPHOSPH6;HSD17B2",null,"dist=16098;dist=2143"]
[1,"poor","chr5",76687500,76687500,"A","AGTCAGGCCCCCTTGATGGCCCTGACTTCCGG","exonic","VAC14","NA",null,"stopgain","VAC14:XM_546837.6:exon13:c.1465delinsCCGGAAGTCAGGGCCATCAAGGGGGCCTGACT:p.F489Pfs*10"]
[1,"poor","chr6",2764134,2764134,"G","GCCTCCAGCCTCACAGGTCTGCGGGCTGGAGGCCGTCCTGT","intronic","AUTS2"]
[1,"poor","chr6",8903328,8903328,"A","G","intronic","SLC12A9"]
[1,"poor","chr6",26624701,26624701,"G","T","ncRNA_intronic","LOC102154816"]
[1,"poor","chr6",40810031,40810031,"A","C","intergenic","LOC102151365;DENND2D",null,"dist=15741;dist=10985"]
[1,"poor","chr6",49722605,49722605,"C","G","intronic","RTCA"]
[1,"poor","chr6",74939632,74939632,"A","C","intronic","PTGER3"]
[1,"poor","chr7",5999061,5999061,"T","C","intergenic","LOC111096602;IL19",null,"dist=50433;dist=1933"]
[1,"poor","chr7",27088305,27088305,"A","C","intergenic","DNM3;METTL13",null,"dist=63366;dist=71120"]
[1,"poor","chr7",32687016,32687018,"ATT","A","intronic","RGS7"]
[1,"poor","chr7",54895815,54895815,"T","TTC","intronic","MAPRE2"]
[1,"poor","chr7",65978716,65978716,"C","G","intergenic","LOC111096799;LOC111096800",null,"dist=7667;dist=35572"]
[1,"poor","chr8",2380015,2380015,"G","A","intergenic","ITPK1;LOC102156002",null,"dist=243787;dist=40544"]
[1,"poor","chr8",30613388,30613390,"TCC","T","intronic","SAMD4A"]
[1,"poor","chr8",34001493,34001493,"G","T","intergenic","DACT1;LOC102157168",null,"dist=41822;dist=211622"]
[1,"poor","chr8",56777639,56777639,"A","T","intergenic","LOC111097128;LOC102154268",null,"dist=164549;dist=353088"]
[1,"poor","chr8",65080713,65080713,"G","A","exonic","ATG2B","NA",null,"stopgain","ATG2B:XM_014116147.2:exon9:c.C1222T:p.Q408X,ATG2B:XM_014116144.2:exon15:c.C2293T:p.Q765X,ATG2B:XM_014116145.2:exon15:c.C2290T:p.Q764X,ATG2B:XM_014116146.2:exon15:c.C2293T:p.Q765X,ATG2B:XM_022422358.1:exon15:c.C2293T:p.Q765X,ATG2B:XM_022422359.1:exon15:c.C2293T:p.Q765X,ATG2B:XM_022422360.1:exon15:c.C2293T:p.Q765X,ATG2B:XM_537549.5:exon15:c.C2293T:p.Q765X"]
[1,"poor","chr8",73705052,73705052,"C","T","intergenic","LOC111097184;LOC100683065",null,"dist=749918;dist=140195"]
[1,"poor","chr9",7678203,7678203,"A","G","intergenic","LOC111097302;LOC111097303",null,"dist=105188;dist=20657"]
[1,"poor","chr9",14210728,14210728,"T","TCA","intronic","CEP112"]
[1,"poor","chr9",26845899,26845899,"C","A","intronic","SPAG9"]
[1,"poor","chr9",34448162,34448162,"G","A","intergenic","RNFT1;NONE",null,"dist=5402;dist=NONE"]
[1,"poor","chr9",48425342,48425342,"G","GGCT","intronic","STPG3"]
[1,"poor","chr9",53448271,53448271,"A","G","intronic","ASS1"]
[1,"poor","chrX",49502228,49502236,"GCAGGTGTC","G","intergenic","ASB12;LOC106558389",null,"dist=36467;dist=111927"]
[1,"poor","chrX",103111545,103111545,"A","C","intergenic","FRMD7;RAP2C",null,"dist=56406;dist=23207"]
[5,"poor","chr1",6921672,6921672,"A","AT","intergenic","CBLN2;LOC111090576",null,"dist=537113;dist=176780"]
[5,"poor","chr1",20582426,20582426,"G","C","intergenic","TCF4;CCDC68",null,"dist=165059;dist=61876"]
[5,"poor","chr1",26949872,26949872,"T","C","intronic","SLC2A12"]
[5,"poor","chr1",45584132,45584132,"T","C","intergenic","LOC102153338;LOC111090678",null,"dist=331139;dist=100544"]
[5,"poor","chr1",59281236,59281236,"G","A","intergenic","MAN1A1;LOC111096174",null,"dist=6300;dist=844852"]
[5,"poor","chr1",67848766,67848766,"A","G","intronic","LAMA2"]
[5,"poor","chr1",87850261,87850265,"CTTTT","C","intronic","APBA1"]
[5,"poor","chr1",89727559,89727559,"C","T","intronic","DMRT1"]
[5,"poor","chr1",107184458,107184458,"T","C","exonic","SLC6A16","TOLERATED",null,"nonsynonymous SNV","SLC6A16:XM_022423949.1:exon13:c.T2230C:p.S744P,SLC6A16:XM_022423951.1:exon13:c.T2230C:p.S744P,SLC6A16:XM_022423923.1:exon14:c.T2473C:p.S825P,SLC6A16:XM_022423927.1:exon14:c.T2470C:p.S824P,SLC6A16:XM_022423928.1:exon14:c.T2455C:p.S819P,SLC6A16:XM_022423932.1:exon14:c.T2452C:p.S818P,SLC6A16:XM_022423935.1:exon14:c.T2434C:p.S812P,SLC6A16:XM_022423939.1:exon14:c.T2413C:p.S805P,SLC6A16:XM_022423945.1:exon14:c.T2401C:p.S801P,SLC6A16:XM_022423946.1:exon14:c.T2380C:p.S794P"]
[5,"poor","chr1",119294400,119294400,"C","G","intergenic","TDRD12;NUDT19",null,"dist=4299;dist=11455"]
[5,"poor","chr10",3008821,3008821,"A","T","intergenic","LRIG3;LOC106559347",null,"dist=236191;dist=270272"]
[5,"poor","chr10",19344008,19344014,"TACACAC","T","intronic","TBC1D22A"]
[5,"poor","chr10",21650673,21650673,"C","A","intergenic","PARVB;LOC111097628",null,"dist=20902;dist=11718"]
[5,"poor","chr10",37525352,37525352,"G","A","intergenic","LOC111097688;NCK2",null,"dist=7624;dist=58999"]
[5,"poor","chr10",50217031,50217031,"A","G","ncRNA_intronic","LOC111097744"]
[5,"poor","chr10",54428965,54428965,"T","C","ncRNA_intronic","LOC111097752"]
[5,"poor","chr10",64440457,64440457,"A","G","intergenic","LOC111097786;SLC1A4",null,"dist=67316;dist=42383"]
[5,"poor","chr11",7541006,7541006,"A","T","intergenic","LOC111097917;LOC106559451",null,"dist=85736;dist=121313"]
[5,"poor","chr11",24636346,24636346,"A","C","intergenic","LOC111098033;SPOCK1",null,"dist=254646;dist=96944"]
[5,"poor","chr11",30659266,30659266,"G","C","intronic","PTPRD"]
[5,"poor","chr11",46060709,46060710,"AC","A","intronic","LINGO2"]
[5,"poor","chr11",51590306,51590306,"A","G","intronic","DNAJB5"]
[5,"poor","chr11",65250740,65250740,"A","T","intronic","LOC474798"]
[5,"poor","chr12",6540782,6540782,"T","G","intergenic","CCDC167;MDGA1",null,"dist=15950;dist=114804"]
[5,"poor","chr12",11116857,11116857,"C","G","intergenic","TRERF1;LOC111098260",null,"dist=69840;dist=22767"]
[5,"poor","chr12",24953999,24953999,"T","A","ncRNA_intronic","LOC111098164"]
[5,"poor","chr12",30074475,30074475,"C","A","intergenic","LOC111098168;ADGRB3",null,"dist=151462;dist=1262316"]
[5,"poor","chr12",47420046,47420046,"A","G","intergenic","LOC111098350;SPACA1",null,"dist=285042;dist=29843"]
[5,"poor","chr12",62291425,62291425,"A","T","intronic","HACE1"]
[5,"poor","chr12",67738920,67738920,"C","T","ncRNA_intronic","LOC111098398"]
[5,"poor","chr13",9256820,9256820,"C","CT","intergenic","LOC111098522;LOC111098523",null,"dist=19383;dist=102693"]
[5,"poor","chr13",16990874,16990874,"C","CA","intergenic","MED30;EXT1",null,"dist=41371;dist=181623"]
[5,"poor","chr13",32672012,32672051,"TTTCTGATTCCACACAAATGCCTGCCCTACGACCCAGCAA","T","intergenic","LOC102154799;LOC102154932",null,"dist=565134;dist=157956"]
[5,"poor","chr13",45593180,45593180,"G","A","intronic","SCFD2"]
[5,"poor","chr13",51170297,51170297,"C","G","intergenic","LOC111098475;LOC100683979",null,"dist=14980;dist=18579"]
[5,"poor","chr14",2168367,2168367,"T","C","intergenic","COR2T13;LOC100685834",null,"dist=19844;dist=50095"]
[5,"poor","chr14",7364855,7364855,"C","T","intronic","AHCYL2"]
[5,"poor","chr14",26868381,26868382,"GT","G","intergenic","THSD7A;LOC102156909",null,"dist=98654;dist=270774"]
[5,"poor","chr14",29240502,29240502,"G","A","intronic","DGKB"]
[5,"poor","chr14",49404085,49404085,"G","C","ncRNA_intronic","LOC111098831"]
[5,"poor","chr14",56675740,56675740,"A","T","intergenic","CTTNBP2;LOC111098701",null,"dist=10303;dist=63028"]
[5,"poor","chr15",7121186,7121186,"A","G","intronic","DLGAP3"]
[5,"poor","chr15",22323578,22323578,"T","C","intronic","PPP1R12A"]
[5,"poor","chr15",24548413,24548413,"A","G","intergenic","LOC111099025;TMTC2",null,"dist=29136;dist=81197"]
[5,"poor","chr15",41616271,41616271,"A","C","intronic","PAH"]
[5,"poor","chr15",47702377,47702377,"T","G","intronic","IQCM"]
[5,"poor","chr15",63374583,63374583,"T","TAG","intergenic","LOC111098929;ANXA10",null,"dist=404358;dist=165597"]
[5,"poor","chr16",9714190,9714190,"C","T","intronic","KIAA1549"]
[5,"poor","chr16",21735821,21735821,"T","TTCTCTCTC","ncRNA_intronic","LOC111090268"]
[5,"poor","chr16",34163905,34163905,"A","G","intergenic","MBOAT4;LEPROTL1",null,"dist=6788;dist=12905"]
[5,"poor","chr16",40009649,40009652,"AAAC","A","intergenic","LOC106559864;LOC102155650",null,"dist=14981;dist=43133"]
[5,"poor","chr16",54945528,54945528,"T","C","intergenic","LOC111090192;CSMD1",null,"dist=23516;dist=197462"]
[5,"poor","chr17",12447141,12447141,"G","A","intergenic","LOC102151232;LOC102151310",null,"dist=94293;dist=68078"]
[5,"poor","chr17",18949143,18949143,"C","CATACTTTCTT","intronic","NCOA1"]
[5,"poor","chr17",31083333,31083333,"A","G","intronic","SOS1"]
[5,"poor","chr17",38251242,38251242,"T","C","intergenic","FABP1;SMYD1",null,"dist=3273;dist=9655"]
[5,"poor","chr17",53313774,53313774,"A","G","intergenic","CASQ2;NHLH2",null,"dist=14681;dist=45501"]
[5,"poor","chr17",58922624,58922624,"T","C","intergenic","LOC111090706;LOC100683958",null,"dist=97481;dist=13846"]
[5,"poor","chr18",10904527,10904527,"G","T","intronic","VPS41"]
[5,"poor","chr18",23333014,23333014,"C","T","intergenic","LOC111090915;LOC111090917",null,"dist=43099;dist=4349"]
[5,"poor","chr18",29332441,29332441,"T","C","intergenic","LRRC4C;LOC111090808",null,"dist=480954;dist=263143"]
[5,"poor","chr18",45883626,45883626,"G","A","ncRNA_intronic","LOC106560001"]
[5,"poor","chr18",48375224,48375224,"G","GT","intergenic","LOC111090986;FGF3",null,"dist=13395;dist=7595"]
[5,"poor","chr19",5675169,5675169,"A","T","intergenic","LOC111091099;LOC111091101",null,"dist=440702;dist=1598486"]
[5,"poor","chr19",21115305,21115305,"C","A","intergenic","LOC111091129;LOC111091051",null,"dist=120240;dist=347575"]
[5,"poor","chr19",27331594,27331594,"A","T","intergenic","CNTNAP5;LOC111091056",null,"dist=933761;dist=128613"]
[5,"poor","chr19",45566673,45566673,"C","A","intronic","ARHGAP15"]
[5,"poor","chr19",48736735,48736735,"C","CCTCTCAAGTAGATGACACAGTT","intergenic","LOC111091079;LOC111091080",null,"dist=179689;dist=148921"]
[5,"poor","chr2",10480124,10480124,"A","G","intronic","PIP4K2A"]
[5,"poor","chr2",23194323,23194323,"A","G","intronic","LOC478000"]
[5,"poor","chr2",28836513,28836513,"C","T","intronic","SFMBT2"]
[5,"poor","chr2",34602178,34602180,"GTC","G","intronic","ZMYND11"]
[5,"poor","chr2",48569823,48569823,"C","T","ncRNA_exonic","LOC102152511"]
[5,"poor","chr2",65734579,65734579,"G","A","intronic","ZNF423"]
[5,"poor","chr2",71846598,71846602,"CAGAG","C","intergenic","GMEB1;TAF12",null,"dist=3457;dist=18672"]
[5,"poor","chr2",84355135,84355135,"G","A","UTR3","KIAA2013","NA","XM_535403.6:c.*155G>A"]
[5,"poor","chr20",4491417,4491417,"A","T","ncRNA_exonic","LOC111091229"]
[5,"poor","chr20",17554238,17554238,"A","T","intergenic","LOC111091266;CNTN3",null,"dist=13465;dist=148921"]
[5,"poor","chr20",34434867,34434867,"T","C","intronic","ERC2"]
[5,"poor","chr20",40361315,40361315,"C","CATCTAGGAAGGGAGGAGAGAAACATGTAAGATCCTATGATAAAACTTAGTGA","intronic","PRKAR2A"]
[5,"poor","chr20",51730927,51730927,"C","T","intergenic","LOC484987;LOC106560102",null,"dist=10806;dist=56279"]
[5,"poor","chr20",57879157,57879157,"A","G","UTR3","FSTL3","NA","XM_022407317.1:c.*565T>C;XM_850129.6:c.*565T>C"]
[5,"poor","chr21",13861005,13861005,"A","G","intronic","DLG2"]
[5,"poor","chr21",26067964,26067964,"A","T","intronic","NUMA1"]
[5,"poor","chr21",31230496,31230496,"C","G","intronic","PPFIBP2"]
[5,"poor","chr21",45700193,45700193,"G","C","intergenic","LOC106560181;LOC111091614",null,"dist=361752;dist=98211"]
[5,"poor","chr22",2586191,2586191,"A","G","intronic","FNDC3A"]
[5,"poor","chr22",18532214,18532214,"A","G","intergenic","LOC610091;LOC100682783",null,"dist=161865;dist=119539"]
[5,"poor","chr22",33299141,33299141,"A","T","intergenic","LOC111091820;SPRY2",null,"dist=76747;dist=66998"]
[5,"poor","chr22",38836202,38836202,"T","A","intergenic","SLITRK6;LOC102156659",null,"dist=917929;dist=423540"]
[5,"poor","chr22",52831033,52831033,"G","C","intergenic","LOC111091704;LOC111091808",null,"dist=52779;dist=234886"]
[5,"poor","chr22",60104458,60104458,"G","T","ncRNA_intronic","LOC111091775"]
[5,"poor","chr23",12405648,12405648,"T","A","intronic","CMTM8"]
[5,"poor","chr23",26898873,26898873,"T","C","ncRNA_intronic","LOC111091925"]
[5,"poor","chr23",33634267,33634267,"A","G","ncRNA_intronic","LOC111091952"]
[5,"poor","chr23",44179355,44179355,"T","C","intergenic","TM4SF1;LOC111091986",null,"dist=18656;dist=48983"]
[5,"poor","chr24",2290972,2290972,"A","G","intronic","KIZ"]
[5,"poor","chr24",17687582,17687582,"T","G","ncRNA_exonic","LOC111092057"]
[5,"poor","chr24",19661405,19661405,"C","T","ncRNA_intronic","LOC106557688"]
[5,"poor","chr24",36366692,36366694,"CAT","C","intronic","SLC9A8"]
[5,"poor","chr24",41887102,41887103,"TG","T","intergenic","LOC111092207;LOC102156496",null,"dist=52174;dist=50725"]
[5,"poor","chr25",7147703,7147703,"A","G","intergenic","STARD13;KL",null,"dist=29830;dist=6656"]
[5,"poor","chr25",24071843,24071843,"A","G","intergenic","SCRG1;LOC111092298",null,"dist=61321;dist=44123"]
[5,"poor","chr25",30250447,30250447,"A","G","intronic","PTK2B"]
[5,"poor","chr25",44558487,44558488,"AC","A","intergenic","NGEF;NEU2",null,"dist=10649;dist=5176"]
[5,"poor","chr25",49889811,49889811,"T","G","intergenic","LOC111092418;NDUFA10",null,"dist=88764;dist=30937"]
[5,"poor","chr26",8899575,8899576,"AT","A","intronic","CUX2"]
[5,"poor","chr26",22701500,22701500,"C","T","intronic","AP1B1"]
[5,"poor","chr26",27612632,27612632,"T","A","intronic","LOC607368"]
[5,"poor","chr26",38700228,38700228,"T","C","downstream","ACTA2","NA","dist=206"]
[5,"poor","chr27",4794349,4794349,"T","A","intergenic","LOC111092893;FAIM2",null,"dist=31594;dist=8362"]
[5,"poor","chr27",19268552,19268552,"A","T","intronic","CCDC91"]
[5,"poor","chr27",24666905,24666905,"C","T","ncRNA_intronic","LOC111092732"]
[5,"poor","chr27",40429519,40429519,"G","A","intergenic","C27H12orf4;FGF6",null,"dist=41095;dist=10779"]
[5,"poor","chr28",5880110,5880110,"A","C","intronic","PCGF5"]
[5,"poor","chr28",11137180,11137180,"G","C","intronic","CRTAC1"]
[5,"poor","chr28",26934415,26934415,"T","TG","intergenic","GFRA1;CCDC172",null,"dist=24386;dist=19530"]
[5,"poor","chr28",28606739,28606739,"C","G","intergenic","LOC111093046;LOC111093034",null,"dist=12969;dist=22471"]
[5,"poor","chr29",3043278,3043278,"T","C","intergenic","SNTG1;PXDNL",null,"dist=223810;dist=234013"]
[5,"poor","chr29",15073070,15073070,"G","T","intergenic","LOC100688592;LOC102154401",null,"dist=17721;dist=59596"]
[5,"poor","chr29",20144721,20144721,"G","A","intergenic","LOC111093222;EYA1",null,"dist=122179;dist=31585"]
[5,"poor","chr29",37464535,37464535,"G","A","intergenic","LOC111093224;LOC111093186",null,"dist=11907;dist=40079"]
[5,"poor","chr29",40046861,40046861,"C","G","intergenic","LOC111093202;LOC111093235",null,"dist=51759;dist=21704"]
[5,"poor","chr3",14490511,14490511,"G","GA","intronic","MCTP1"]
[5,"poor","chr3",28488289,28488289,"T","G","intronic","AP3B1"]
[5,"poor","chr3",33505692,33505692,"T","A","ncRNA_intronic","LOC111095178"]
[5,"poor","chr3",52622246,52622246,"A","T","intronic","TICRR"]
[5,"poor","chr3",54531260,54531260,"T","A","intronic","AP3B2"]
[5,"poor","chr3",65580884,65580884,"T","C","ncRNA_intronic","LOC102156862"]
[5,"poor","chr3",79495662,79495662,"T","A","intergenic","LOC111095396;LOC111095397",null,"dist=425537;dist=282685"]
[5,"poor","chr30",2475555,2475555,"G","GCACACACACACA","intergenic","LOC111093357;GJD2",null,"dist=52625;dist=1786"]
[5,"poor","chr30",8366346,8366346,"G","GCCTCCCTCTCTC","intronic","NUSAP1"]
[5,"poor","chr30",20934170,20934170,"C","A","intergenic","LOC111093355;PRTG",null,"dist=11931;dist=7900"]
[5,"poor","chr30",36299385,36299385,"G","T","intergenic","ADPGK;LOC111093401",null,"dist=151348;dist=49130"]
[5,"poor","chr31",1072171,1072171,"C","T","intronic","VGLL3"]
[5,"poor","chr31",15676652,15676652,"C","G","intergenic","LOC111093442;LOC106558100",null,"dist=363605;dist=549606"]
[5,"poor","chr31",22038774,22038774,"T","C","intergenic","LOC102151217;LOC102151271",null,"dist=38714;dist=38933"]
[5,"poor","chr31",39627078,39627078,"T","TG","intronic","PCNT"]
[5,"poor","chr32",10487956,10487956,"A","C","intronic","AFF1"]
[5,"poor","chr32",16949212,16949212,"G","A","intergenic","LOC106558121;LOC106558143",null,"dist=9144;dist=48171"]
[5,"poor","chr32",30463964,30463964,"C","A","intergenic","ELOVL6;ENPEP",null,"dist=103203;dist=89091"]
[5,"poor","chr32",36325628,36325628,"A","G","intergenic","LOC111093622;LOC111093674",null,"dist=38984;dist=113899"]
[5,"poor","chr33",15358720,15358720,"T","C","ncRNA_intronic","LOC102155742"]
[5,"poor","chr33",28873094,28873098,"GACTA","G","intronic","LRCH3"]
[5,"poor","chr33",30249318,30249318,"T","C","intronic","DLG1"]
[5,"poor","chr34",14287267,14287267,"C","T","intergenic","DNAJC19;SOX2",null,"dist=82531;dist=565733"]
[5,"poor","chr34",20288298,20288298,"A","G","ncRNA_intronic","LOC100687261"]
[5,"poor","chr34",38889227,38889227,"C","CAT","intronic","NAALADL2"]
[5,"poor","chr35",10208287,10208287,"C","T","intergenic","TFAP2A;LOC488215",null,"dist=27803;dist=96454"]
[5,"poor","chr35",16100426,16100426,"A","C","intergenic","LOC102155759;STMND1",null,"dist=112672;dist=30523"]
[5,"poor","chr35",22151916,22151916,"C","G","intergenic","LOC102151835;LOC111094009",null,"dist=370421;dist=11664"]
[5,"poor","chr36",8799775,8799775,"C","T","intergenic","LOC111094261;LOC111094268",null,"dist=35771;dist=23135"]
[5,"poor","chr36",26108312,26108326,"CTCTCTCTCTCTCTG","C","intronic","DUSP19"]
[5,"poor","chr36",28888715,28888715,"T","C","UTR3","ITGAV","NA","XM_014110784.1:c.*1824T>C"]
[5,"poor","chr37",15355712,15355712,"C","T","ncRNA_intronic","LOC111094410"]
[5,"poor","chr37",22253583,22253583,"G","GA","intronic","ABCA12"]
[5,"poor","chr38",4285909,4285909,"A","G","intergenic","LOC111094563;LOC106558354",null,"dist=274538;dist=185288"]
[5,"poor","chr38",20915028,20915028,"A","G","intronic","DUSP12"]
[5,"poor","chr38",22775873,22775873,"G","A","intronic","CADM3"]
[5,"poor","chr4",14367629,14367634,"TCTTTG","T","intronic","ZNF365"]
[5,"poor","chr4",20042037,20042037,"T","A","intronic","STOX1"]
[5,"poor","chr4",34874191,34874191,"C","G","intronic","ANXA8L1"]
[5,"poor","chr4",55990514,55990514,"G","A","intronic","GRIA1"]
[5,"poor","chr4",62575949,62575949,"A","G","intergenic","ITGA1;LOC111095611",null,"dist=120009;dist=50263"]
[5,"poor","chr4",76070418,76070422,"TAAAA","T","intergenic","LOC479376;LOC102155945",null,"dist=71168;dist=42221"]
[5,"poor","chr4",82904753,82904753,"G","A","intronic","CDH12"]
[5,"poor","chr5",8462813,8462813,"C","T","intronic","CDON"]
[5,"poor","chr5",26293655,26293655,"T","C","intronic","GRIA4"]
[5,"poor","chr5",31582892,31582892,"C","A","exonic","ZFP3","TOLERATED",null,"nonsynonymous SNV","ZFP3:XM_005619894.3:exon2:c.G200T:p.R67M,ZFP3:XM_005619895.3:exon2:c.G200T:p.R67M,ZFP3:XM_005619896.3:exon2:c.G200T:p.R67M,ZFP3:XM_014113493.2:exon2:c.G200T:p.R67M,ZFP3:XM_014113494.2:exon2:c.G200T:p.R67M,ZFP3:XM_022418422.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418423.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418424.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418425.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418427.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418428.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418429.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418430.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418431.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418432.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418433.1:exon2:c.G200T:p.R67M,ZFP3:XM_022418434.1:exon2:c.G200T:p.R67M,ZFP3:XM_546570.6:exon2:c.G200T:p.R67M"]
[5,"poor","chr5",43057675,43057675,"A","C","intergenic","LOC102154367;SERBP1",null,"dist=18656;dist=112878"]
[5,"poor","chr5",49025473,49025473,"T","G","intronic","NFIA"]
[5,"poor","chr5",66405979,66405979,"G","C","ncRNA_intronic","LOC102153633"]
[5,"poor","chr5",70037310,70037310,"T","A","intergenic","SDR42E1;PLCG2","NA","dist=1386;dist=17373"]
[5,"poor","chr5",88719630,88719630,"G","T","intergenic","LOC111096139;NONE",null,"dist=82529;dist=NONE"]
[5,"poor","chr6",9718888,9718888,"A","T","intergenic","LOC100686764;LOC489851",null,"dist=29081;dist=3513"]
[5,"poor","chr6",14923376,14923376,"T","A","intronic","MAD1L1"]
[5,"poor","chr6",23123623,23123623,"G","A","intronic","OTOA"]
[5,"poor","chr6",31409014,31409014,"A","G","intronic","LOC111096476"]
[5,"poor","chr6",46264403,46264403,"T","C","intergenic","LOC111096509;LOC612019",null,"dist=57180;dist=689940"]
[5,"poor","chr6",58644986,58644986,"T","G","intergenic","ZNF326;LOC106558971",null,"dist=12205;dist=21417"]
[5,"poor","chr6",64918758,64918758,"A","T","intergenic","LOC111096526;LOC111096432",null,"dist=33025;dist=246815"]
[5,"poor","chr7",5742888,5742888,"C","T","intronic","CFHR5"]
[5,"poor","chr7",7573230,7573230,"A","C","intergenic","LOC111096607;LOC111096608",null,"dist=8338;dist=47476"]
[5,"poor","chr7",22762917,22762917,"T","C","intergenic","ASTN1;PAPPA2",null,"dist=10873;dist=6677"]
[5,"poor","chr7",28760373,28760373,"T","C","intronic","SCYL3"]
[5,"poor","chr7",43176693,43176693,"A","G","intronic","CRTC2"]
[5,"poor","chr7",49660682,49660682,"G","A","ncRNA_intronic","LOC111096762"]
[5,"poor","chr7",64947112,64947112,"G","T","intronic","TMEM241"]
[5,"poor","chr8",966900,966900,"A","G","intronic","CATSPERB"]
[5,"poor","chr8",5857205,5857205,"C","G","intergenic","LOC111097201;NOVA1",null,"dist=40716;dist=276403"]
[5,"poor","chr8",18601896,18601896,"A","T","intergenic","LOC102156547;LOC111097208",null,"dist=750691;dist=225209"]
[5,"poor","chr8",24232554,24232554,"T","A","intronic","MDGA2"]
[5,"poor","chr8",37966633,37966633,"G","GCA","intronic","PPP2R5E"]
[5,"poor","chr8",58560211,58560211,"T","TA","intergenic","LOC111097235;LOC111097236",null,"dist=293869;dist=169080"]
[5,"poor","chr8",65267207,65267207,"A","T","intronic","PAPOLA"]
[5,"poor","chr9",208718,208718,"A","G","intronic","CCDC57"]
[5,"poor","chr9",5237899,5237899,"C","A","intronic","GGA3"]
[5,"poor","chr9",19701682,19701682,"A","C","downstream","LOC111097347",null,"dist=897"]
[5,"poor","chr9",30069619,30069619,"T","G","intronic","TOM1L1"]
[5,"poor","chr9",35438715,35438715,"T","A","intronic","BCAS3"]
[5,"poor","chr9",47773689,47773689,"C","T","intergenic","ATP2A3;LOC111097466",null,"dist=46672;dist=11276"]
[5,"poor","chr9",53291147,53291147,"C","T","intergenic","EXOSC2;FUBP3",null,"dist=14911;dist=26808"]
[5,"poor","chrX",8405220,8405221,"GA","G","intergenic","LOC111094891;FRMPD4",null,"dist=42007;dist=257794"]
[5,"poor","chrX",19559702,19559708,"TTGTGTG","T","intronic","CXHXorf58"]
[5,"poor","chrX",24834545,24834549,"CACAT","C","intronic","IL1RAPL1"]
[5,"poor","chrX",30567449,30567449,"G","A","intergenic","LOC111094853;MAGEB16",null,"dist=332899;dist=183241"]
[5,"poor","chrX",42020601,42020611,"AGTGTGTGTGC","A","intronic","HDAC6"]
[5,"poor","chrX",58246313,58246313,"T","C","intergenic","NEXMIF;ABCB7",null,"dist=125860;dist=59491"]
[5,"poor","chrX",63807047,63807047,"C","G","intergenic","LOC106558391;POU3F4",null,"dist=69530;dist=620114"]
[5,"poor","chrX",74790684,74790688,"CAGAG","C","intronic","NOX1"]
[5,"poor","chrX",79967042,79967042,"G","GGGAGGGGATGCCCTCCCTCCTGGGTCCTGCA","ncRNA_intronic","LOC111094702"]
[5,"poor","chrX",92318553,92318553,"T","A","intergenic","TMEM255A;ATP1B4",null,"dist=16893;dist=28890"]
[5,"poor","chrX",108143353,108143353,"T","TTTC","intergenic","ZIC3;ATP5I",null,"dist=309771;dist=141855"]
[5,"poor","chrX",110003757,110003757,"T","C","ncRNA_intronic","LOC102155873"]
[7,"poor","chr1",2000490,2000490,"C","T","intergenic","LOC111090560;LOC111092037",null,"dist=140029;dist=166959"]
[7,"poor","chr1",7869951,7869951,"A","G","intergenic","LOC111093237;LOC100686010",null,"dist=14585;dist=19017"]
[7,"poor","chr1",20081774,20081774,"T","C","intronic","TCF4"]
[7,"poor","chr1",37529694,37529694,"C","CA","intronic","GRM1"]
[7,"poor","chr1",42539700,42539700,"T","C","intronic","SYNE1"]
[7,"poor","chr1",55567930,55567930,"C","T","intronic","KIF25"]
[7,"poor","chr1",61536295,61536295,"G","A","intergenic","LOC106558802;LOC111096196",null,"dist=45402;dist=120150"]
[7,"poor","chr1",73980482,73980482,"T","G","intronic","AGTPBP1"]
[7,"poor","chr1",90394828,90394828,"C","CCCAATTCCTGGGGGCAGGG","ncRNA_intronic","LOC111090766"]
[7,"poor","chr1",96492981,96492981,"T","A","intergenic","LOC111097050;LOC106559328",null,"dist=8926;dist=11795"]
[7,"poor","chr1",104365312,104365312,"T","C","intergenic","LOC106559035;LOC102151412",null,"dist=18171;dist=90703"]
[7,"poor","chr1",110920262,110920262,"A","G","intergenic","ZNF285;ZNF112",null,"dist=1553;dist=18278"]
[7,"poor","chr10",1886207,1886207,"T","C","intronic","CTDSP2"]
[7,"poor","chr10",4328796,4328796,"T","C","intergenic","SLC16A7;LOC111097816",null,"dist=828112;dist=424373"]
[7,"poor","chr10",18972874,18972874,"C","A","intergenic","LOC102151247;TBC1D22A",null,"dist=476743;dist=223992"]
[7,"poor","chr10",28629263,28629263,"A","G","intronic","RASD2"]
[7,"poor","chr10",34177002,34177002,"T","A","intergenic","TXNRD1;SOWAHC",null,"dist=155453;dist=65669"]
[7,"poor","chr10",50217057,50217059,"GTC","G","ncRNA_intronic","LOC111097744"]
[7,"poor","chr10",52302808,52302808,"G","T","intronic","NRXN1"]
[7,"poor","chr10",67876106,67876106,"T","A","intronic","ANTXR1"]
[7,"poor","chr11",6967017,6967017,"C","T","intergenic","LOC111097915;LOC111097917",null,"dist=41541;dist=486127"]
[7,"poor","chr11",11763438,11763438,"T","C","ncRNA_intronic","LOC111097998"]
[7,"poor","chr11",27282776,27282776,"C","G","intergenic","IL33;TPD52L3",null,"dist=26053;dist=70761"]
[7,"poor","chr11",29355325,29355325,"G","A","intronic","PTPRD"]
[7,"poor","chr11",45317449,45317449,"T","C","intronic","TEK"]
[7,"poor","chr11",51467688,51467688,"T","C","intergenic","FAM205A;FAM205C",null,"dist=31171;dist=3808"]
[7,"poor","chr11",63315836,63315836,"T","G","intergenic","LOC111098122;LOC102152238",null,"dist=18885;dist=53234"]
[7,"poor","chr12",4487038,4487038,"A","T","intergenic","DEF6;PPARD",null,"dist=3494;dist=5829"]
[7,"poor","chr12",6715302,6715302,"G","A","intronic","MDGA1"]
[7,"poor","chr12",23193822,23193822,"A","G","intronic","BMP5"]
[7,"poor","chr12",27832449,27832449,"C","T","intronic","EYS"]
[7,"poor","chr12",40362271,40362271,"A","AG","ncRNA_intronic","LOC111098329"]
[7,"poor","chr12",47341338,47341338,"G","A","intergenic","LOC111098350;SPACA1",null,"dist=206334;dist=108551"]
[7,"poor","chr12",61272557,61272557,"T","C","intergenic","LOC111098183;LOC111098184",null,"dist=60933;dist=91652"]
[7,"poor","chr13",4028821,4028821,"T","C","intergenic","UBR5;ODF1",null,"dist=5457;dist=108298"]
[7,"poor","chr13",10089475,10089475,"C","A","intronic","EBAG9"]
[7,"poor","chr13",22180409,22180409,"T","G","exonic","FER1L6","TOLERATED",null,"synonymous SNV","FER1L6:XM_022426687.1:exon4:c.T285G:p.G95G"]
[7,"poor","chr13",28080866,28080866,"G","A","intergenic","LOC111098453;LOC106559616",null,"dist=6359;dist=99737"]
[7,"poor","chr13",42771831,42771831,"G","C","intronic","COX7B2"]
[7,"poor","chr13",54800377,54800377,"C","A","intergenic","LOC111098478;TECRL",null,"dist=422911;dist=457083"]
[7,"poor","chr13",60901976,60901976,"T","A","intergenic","GC;NPFFR2",null,"dist=73938;dist=238309"]
[7,"poor","chr14",8028305,8028309,"GGCCA","G","UTR5","PRRT4",null,"XM_003639476.4:c.-931_-927delinsG"]
[7,"poor","chr14",14286338,14286338,"G","T","ncRNA_intronic","LOC106559693"]
[7,"poor","chr14",33663290,33663290,"T","A","intergenic","LOC111098676;TWISTNB",null,"dist=129436;dist=182478"]
[7,"poor","chr14",42791868,42791868,"G","A","intronic","SCRN1"]
[7,"poor","chr14",48868285,48868285,"T","C","intronic","THAP5"]
[7,"poor","chr15",2968497,2968497,"A","AGG","intronic","MFSD2A"]
[7,"poor","chr15",4772739,4772739,"A","G","intronic","EPHA10"]
[7,"poor","chr15",18053390,18053390,"A","G","intronic","LOC475395"]
[7,"poor","chr15",32215585,32215585,"C","T","intergenic","LOC111090029;LOC111098897",null,"dist=194027;dist=31046"]
[7,"poor","chr15",37329733,37329733,"G","A","intergenic","LOC111090055;LOC111090056",null,"dist=17901;dist=17118"]
[7,"poor","chr15",42375278,42375278,"C","T","intronic","NT5DC3"]
[7,"poor","chr15",54755139,54755139,"G","C","intergenic","GRIA2;LOC102156412",null,"dist=44428;dist=220245"]
[7,"poor","chr16",7406398,7406398,"G","A","downstream","TAS2R5",null,"dist=457"]
[7,"poor","chr16",8590086,8590086,"G","A","intronic","SLC37A3"]
[7,"poor","chr16",21635225,21635225,"T","A","intronic","PSD3"]
[7,"poor","chr16",26320062,26320062,"T","A","intronic","LOC475578"]
[7,"poor","chr16",39541427,39541427,"A","G","intergenic","MSR1;LOC111090328",null,"dist=27700;dist=71879"]
[7,"poor","chr16",54245668,54245668,"T","C","downstream","LOC102153922",null,"dist=656"]
[7,"poor","chr17",3504853,3504853,"A","T","intergenic","LOC111090464;LOC111090466",null,"dist=511735;dist=30061"]
[7,"poor","chr17",9551788,9551788,"C","A","intergenic","LOC111090417;LOC106559867",null,"dist=8169;dist=725235"]
[7,"poor","chr17",15956220,15956220,"C","CCAAGTAG","intergenic","APOB;TDRD15",null,"dist=40188;dist=36432"]
[7,"poor","chr17",27933182,27933182,"A","C","intergenic","LOC111090569;LOC111090427",null,"dist=440481;dist=171465"]
[7,"poor","chr17",42950532,42950532,"C","G","ncRNA_intronic","LOC102152965"]
[7,"poor","chr17",48748833,48748833,"A","ACTGG","exonic","DCTN1","NA",null,"frameshift substitution","DCTN1:XM_005630544.3:exon3:c.70delinsACTGG:p.V26Wfs*7,DCTN1:XM_005630542.3:exon5:c.412delinsACTGG:p.V140Wfs*7,DCTN1:XM_861100.5:exon5:c.412delinsACTGG:p.V140Wfs*7,DCTN1:XM_005630538.3:exon6:c.433delinsACTGG:p.V147Wfs*7,DCTN1:XM_005630543.3:exon6:c.382delinsACTGG:p.V130Wfs*7,DCTN1:XM_005630537.3:exon7:c.454delinsACTGG:p.V154Wfs*7,DCTN1:XM_022404800.1:exon7:c.451delinsACTGG:p.V153Wfs*7,DCTN1:XM_005630536.3:exon8:c.472delinsACTGG:p.V160Wfs*7,DCTN1:XM_005630539.3:exon8:c.421delinsACTGG:p.V143Wfs*7,DCTN1:XM_005630540.3:exon8:c.421delinsACTGG:p.V143Wfs*7,DCTN1:XM_022404801.1:exon8:c.421delinsACTGG:p.V143Wfs*7,DCTN1:XM_022404802.1:exon8:c.421delinsACTGG:p.V143Wfs*7,DCTN1:XM_861259.5:exon8:c.472delinsACTGG:p.V160Wfs*7"]
[7,"poor","chr17",60335436,60335436,"T","A","intergenic","PSMD4;ZNF687",null,"dist=21826;dist=15317"]
[7,"poor","chr18",208993,208993,"C","CCG","intronic","ABCA13"]
[7,"poor","chr18",15732281,15732281,"C","T","intergenic","LOC111090903;LOC111090906",null,"dist=176005;dist=164745"]
[7,"poor","chr18",26439010,26439010,"G","A","intergenic","API5;LOC111090807",null,"dist=83430;dist=180125"]
[7,"poor","chr18",32872692,32872692,"A","G","intronic","LOC111090942"]
[7,"poor","chr18",42708144,42708144,"A","G","intronic","CKAP5"]
[7,"poor","chr18",47405180,47405183,"GCGC","G","intergenic","LOC483676;SHANK2",null,"dist=85073;dist=72442"]
[7,"poor","chr19",4693946,4693946,"T","C","ncRNA_intronic","LOC111091098"]
[7,"poor","chr19",7030700,7030700,"A","G","intergenic","LOC111091099;LOC111091101",null,"dist=1796233;dist=242955"]
[7,"poor","chr19",21272518,21272518,"G","A","intergenic","LOC111091129;LOC111091051",null,"dist=277453;dist=190362"]
[7,"poor","chr19",26367792,26367792,"C","T","intronic","CNTNAP5"]
[7,"poor","chr19",38692448,38692448,"C","A","intronic","DARS"]
[7,"poor","chr2",2383931,2383931,"A","G","intronic","PARD3"]
[7,"poor","chr2",4172640,4172640,"A","G","intronic","CCDC7"]
[7,"poor","chr2",19380886,19380886,"T","C","intronic","HACD1"]
[7,"poor","chr2",25337245,25337245,"T","C","ncRNA_intronic","LOC102152820"]
[7,"poor","chr2",39624692,39624692,"C","A","intergenic","LOC111094606;LOC111092072",null,"dist=45178;dist=50453"]
[7,"poor","chr2",56409707,56409707,"A","G","intergenic","UTP15;ARHGEF28",null,"dist=14698;dist=17894"]
[7,"poor","chr2",57733038,57733038,"C","G","intergenic","LOC106557681;LOC102154190",null,"dist=224353;dist=62840"]
[7,"poor","chr2",73560537,73560537,"A","AGTGGTTTGGCGCCTGCCTTTGGCC","intergenic","RPS6KA1;HMGN2",null,"dist=26684;dist=18505"]
[7,"poor","chr2",77924288,77924288,"T","C","intronic","EIF4G3"]
[7,"poor","chr20",3366520,3366520,"G","A","intronic","IQSEC1"]
[7,"poor","chr20",9124581,9124581,"T","A","intronic","SRGAP3"]
[7,"poor","chr20",22536151,22536151,"T","C","intronic","FRMD4B"]
[7,"poor","chr20",39143349,39143349,"T","C","intronic","SEMA3F"]
[7,"poor","chr20",43292302,43292302,"T","G","UTR3","CDCP1","NA","XM_005632641.3:c.*2537T>G"]
[7,"poor","chr20",50271493,50271493,"G","A","ncRNA_intronic","LOC111091380"]
[7,"poor","chr20",57629058,57629058,"T","G","intronic","SBNO2"]
[7,"poor","chr21",14835215,14835215,"A","G","intronic","DLG2"]
[7,"poor","chr21",26234754,26234754,"G","T","intronic","NUP98"]
[7,"poor","chr21",30125569,30125569,"G","A","UTR3","LOC611057",null,"XM_848684.2:c.*47G>A"]
[7,"poor","chr21",41900667,41900675,"TTAAATAAA","T","intronic","NAV2"]
[7,"poor","chr21",47927155,47927155,"A","G","ncRNA_intronic","LOC106560206"]
[7,"poor","chr22",13582501,13582501,"G","C","intergenic","LOC111091836;LOC111091631",null,"dist=342464;dist=276704"]
[7,"poor","chr22",26174391,26174391,"C","T","intergenic","DACH1;LOC102156817",null,"dist=239942;dist=509592"]
[7,"poor","chr22",32664874,32664874,"T","C","upstream","RBM26","NA","dist=504"]
[7,"poor","chr22",48746521,48746521,"A","T","intergenic","LOC106557575;SLC15A1",null,"dist=46595;dist=31106"]
[7,"poor","chr22",50328259,50328259,"C","CA","intronic","PCCA"]
[7,"poor","chr23",4393116,4393116,"C","T","intergenic","PDCD6IP;LOC111091861",null,"dist=193886;dist=182053"]
[7,"poor","chr23",16166206,16166206,"A","G","intergenic","CMC1;LOC102155200",null,"dist=132081;dist=128203"]
[7,"poor","chr23",21379687,21379687,"A","G","intronic","ZNF385D"]
[7,"poor","chr23",28636616,28636616,"C","CT","intronic","CPNE4"]
[7,"poor","chr23",39874276,39874276,"A","G","ncRNA_intronic","LOC111091973"]
[7,"poor","chr24",2758691,2758699,"TGTGTGTGA","T","intronic","RALGAPA2"]
[7,"poor","chr24",14138023,14138023,"C","CT","intronic","TMX4"]
[7,"poor","chr24",19601390,19601390,"C","A","downstream","LOC102151643",null,"dist=686"]
[7,"poor","chr24",24231452,24231452,"A","G","intronic","MMP24"]
[7,"poor","chr24",36654323,36654323,"C","G","intergenic","LOC111092180;CEBPB",null,"dist=4989;dist=6971"]
[7,"poor","chr25",4421616,4421616,"T","G","intergenic","SOHLH2;DCLK1",null,"dist=2264;dist=20329"]
[7,"poor","chr25",9890453,9890453,"T","A","intergenic","LOC102156301;LOC111092357",null,"dist=36773;dist=50767"]
[7,"poor","chr25",21992489,21992489,"A","T","intergenic","LOC111092440;GALNTL6",null,"dist=437470;dist=547640"]
[7,"poor","chr25",28800305,28800305,"T","C","intronic","EXTL3"]
[7,"poor","chr25",41377722,41377722,"T","A","intergenic","LOC102153955;PID1",null,"dist=57835;dist=46585"]
[7,"poor","chr26",3992970,3992970,"T","C","intergenic","LOC111092591;LOC111092521",null,"dist=96059;dist=64413"]
[7,"poor","chr26",8341587,8341587,"T","C","intergenic","RAD9B;PPTC7",null,"dist=8173;dist=4103"]
[7,"poor","chr26",20085092,20085092,"C","A","intergenic","SEZ6L;ASPHD2",null,"dist=5787;dist=25269"]
[7,"poor","chr26",24970609,24970609,"A","G","intronic","LOC100685907"]
[7,"poor","chr26",33272477,33272477,"A","C","intergenic","LOC111092660;PCDH15",null,"dist=10782;dist=154251"]
[7,"poor","chr26",37843503,37843503,"T","C","intergenic","LOC111092533;PTEN",null,"dist=24307;dist=9645"]
[7,"poor","chr27",9373968,9373968,"T","C","intronic","NELL2"]
[7,"poor","chr27",22057030,22057030,"A","T","exonic","LMNTD1","DELETERIOUS",null,"nonsynonymous SNV","LMNTD1:XM_022411259.1:exon7:c.A1067T:p.Q356L,LMNTD1:XM_022411262.1:exon7:c.A848T:p.Q283L,LMNTD1:XM_003639952.4:exon8:c.A1355T:p.Q452L,LMNTD1:XM_005637044.3:exon8:c.A959T:p.Q320L,LMNTD1:XM_014108744.2:exon8:c.A1376T:p.Q459L,LMNTD1:XM_022411258.1:exon8:c.A1181T:p.Q394L,LMNTD1:XM_022411260.1:exon8:c.A959T:p.Q320L,LMNTD1:XM_022411261.1:exon8:c.A959T:p.Q320L"]
[7,"poor","chr27",27700521,27700521,"T","C","intronic","AEBP2"]
[7,"poor","chr27",42208236,42208237,"CA","C","intronic","IQSEC3"]
[7,"poor","chr27",43641884,43641884,"A","C","intergenic","FBXL14;WNT5B",null,"dist=16615;dist=20598"]
[7,"poor","chr28",11260074,11260074,"G","T","intergenic","CRTAC1;LOC111093023",null,"dist=33048;dist=6263"]
[7,"poor","chr28",23116124,23116124,"C","T","downstream","LOC111093025",null,"dist=1"]
[7,"poor","chr28",28824075,28824075,"T","G","intergenic","LOC111092943;PRLHR",null,"dist=53848;dist=126225"]
[7,"poor","chr29",1087905,1087905,"A","G","intergenic","LOC102152773;SNAI2",null,"dist=99032;dist=66227"]
[7,"poor","chr29",2838998,2838998,"C","T","intergenic","SNTG1;PXDNL",null,"dist=19530;dist=438293"]
[7,"poor","chr29",17505201,17505201,"T","A","intronic","PREX2"]
[7,"poor","chr29",23140080,23140080,"A","G","intergenic","LOC111093135;PI15",null,"dist=60225;dist=90993"]
[7,"poor","chr29",36120175,36120175,"A","G","ncRNA_intronic","LOC111093158"]
[7,"poor","chr3",10583473,10583477,"TATGA","T","ncRNA_intronic","LOC111095120"]
[7,"poor","chr3",13449607,13449607,"T","G","intergenic","PCSK1;ELL2",null,"dist=172686;dist=224046"]
[7,"poor","chr3",26551997,26551997,"G","A","intronic","DHFR"]
[7,"poor","chr3",35302957,35302957,"C","A","intergenic","ATP10A;LOC102156809",null,"dist=274239;dist=38285"]
[7,"poor","chr3",48013396,48013396,"C","T","intronic","SLCO3A1"]
[7,"poor","chr3",63437804,63437804,"T","TGGG","intergenic","LOC100682666;LOC111095378",null,"dist=241699;dist=60492"]
[7,"poor","chr3",65626301,65626301,"T","C","intergenic","LOC102156862;LOC111095381",null,"dist=3065;dist=255557"]
[7,"poor","chr3",83615002,83615002,"C","T","intronic","STIM2"]
[7,"poor","chr3",90412567,90412567,"A","T","intergenic","LOC102156292;LOC106558648",null,"dist=464649;dist=278040"]
[7,"poor","chr30",8503960,8503960,"A","G","intronic","RTF1"]
[7,"poor","chr30",14565910,14565910,"T","C","ncRNA_intronic","LOC106558052"]
[7,"poor","chr30",28828736,28828736,"G","T","intronic","CSNK1G1"]
[7,"poor","chr30",39386584,39386584,"G","A","intronic","SCAPER"]
[7,"poor","chr31",2913976,2913976,"T","A","intronic","CADM2"]
[7,"poor","chr31",12835038,12835038,"A","G","ncRNA_intronic","LOC102154980"]
[7,"poor","chr31",16634093,16634093,"C","CA","intergenic","LOC106558100;NCAM2",null,"dist=137880;dist=278675"]
[7,"poor","chr31",31919724,31919724,"G","GA","intronic","SIM2"]
[7,"poor","chr32",768693,768697,"CTGTG","C","intronic","NUP54"]
[7,"poor","chr32",5412564,5412564,"C","A","intergenic","PRKG2;RASGEF1B",null,"dist=47168;dist=132925"]
[7,"poor","chr32",17061831,17061832,"TG","T","ncRNA_intronic","LOC106558143"]
[7,"poor","chr32",20829249,20829249,"T","C","intronic","TSPAN5"]
[7,"poor","chr32",36359965,36359965,"A","G","intergenic","LOC111093622;LOC111093674",null,"dist=73321;dist=79562"]
[7,"poor","chr33",8418220,8418221,"GA","G","intergenic","LOC111093799;LOC111093752",null,"dist=189570;dist=51549"]
[7,"poor","chr33",15077075,15077075,"T","C","intergenic","LOC111093723;LOC111093722",null,"dist=305282;dist=145399"]
[7,"poor","chr33",30085514,30085514,"A","C","intronic","DLG1"]
[7,"poor","chr34",271263,271263,"T","A","ncRNA_intronic","LOC100687594","NA"]
[7,"poor","chr34",14221955,14221956,"TC","T","intergenic","DNAJC19;SOX2",null,"dist=17219;dist=631044"]
[7,"poor","chr34",27122661,27122661,"G","A","intergenic","B3GALNT1;NMD3",null,"dist=15798;dist=84327"]
[7,"poor","chr34",33159878,33159878,"T","A","intronic","LOC102151755"]
[7,"poor","chr34",39262431,39262431,"G","GCA","intronic","NAALADL2"]
[7,"poor","chr35",9982124,9982124,"A","AAGAGAAG","intergenic","LOC102151138;LOC111094047",null,"dist=47384;dist=169543"]
[7,"poor","chr35",24746454,24746454,"T","TGC","intergenic","ZNF391;LOC102151425",null,"dist=1134;dist=4011"]
[7,"poor","chr36",3377866,3377866,"C","A","intergenic","ERMN;CYTIP",null,"dist=14652;dist=51541"]
[7,"poor","chr36",16307347,16307347,"A","G","intronic","SLC25A12"]
[7,"poor","chr36",22184337,22184337,"T","C","exonic","TTN","NA",null,"nonsynonymous SNV","TTN:XM_022414800.1:exon279:c.A77926G:p.N25976D"]
[7,"poor","chr37",10686554,10686554,"G","T","intergenic","C2CD6;TMEM237",null,"dist=4330;dist=4456"]
[7,"poor","chr37",21175630,21175630,"T","G","intronic","SPAG16"]
[7,"poor","chr37",26649863,26649863,"G","T","ncRNA_exonic","LOC111094375"]
[7,"poor","chr38",7921611,7921611,"C","T","intergenic","LOC111094586;LOC111094533",null,"dist=38346;dist=231232"]
[7,"poor","chr38",14328839,14328839,"G","A","intergenic","LOC102156453;LOC111094548",null,"dist=124769;dist=65932"]
[7,"poor","chr4",1400800,1400800,"T","G","ncRNA_intronic","LOC111095422"]
[7,"poor","chr4",17258656,17258656,"A","T","intergenic","LOC102152895;CTNNA3",null,"dist=467901;dist=105465"]
[7,"poor","chr4",22169094,22169094,"C","A","intergenic","SLC29A3;CDH23",null,"dist=34028;dist=37878"]
[7,"poor","chr4",34770534,34770534,"G","T","intergenic","LOC489080;GPRIN2",null,"dist=7261;dist=8251"]
[7,"poor","chr4",40259419,40259419,"A","G","intronic","FBXW11"]
[7,"poor","chr4",55800767,55800790,"AACGTTAGGTCCTTTATAGAAAGC","A","downstream","GRIA1",null,"dist=479"]
[7,"poor","chr4",68433907,68433907,"C","T","ncRNA_intronic","LOC102154572"]
[7,"poor","chr4",73855004,73855004,"T","A","intronic","SLC45A2"]
[7,"poor","chr4",86805252,86805252,"T","C","ncRNA_exonic","LOC111095672"]
[7,"poor","chr5",3872459,3872459,"G","T","intergenic","LOC111095778;LOC111095780",null,"dist=22072;dist=58619"]
[7,"poor","chr5",18870193,18870193,"G","A","intergenic","LOC111096097;REXO2",null,"dist=40947;dist=49090"]
[7,"poor","chr5",29447899,29447899,"T","A","intronic","YAP1"]
[7,"poor","chr5",34541909,34541909,"C","T","intergenic","LOC111095886;LOC111095887",null,"dist=25888;dist=15524"]
[7,"poor","chr5",40381223,40381223,"G","T","intronic","ULK2"]
[7,"poor","chr5",53094661,53094661,"T","C","ncRNA_intronic","LOC102156622"]
[7,"poor","chr5",69400626,69400626,"T","A","intronic","CDH13"]
[7,"poor","chr5",71320020,71320020,"T","G","intergenic","LOC111096025;LOC102156020",null,"dist=15786;dist=119991"]
[7,"poor","chr5",86882169,86882169,"T","C","intergenic","CDH8;LOC111096064",null,"dist=138606;dist=40867"]
[7,"poor","chr6",3654605,3654617,"CCTGGGACTCGAT","C","ncRNA_intronic","LOC111096179"]
[7,"poor","chr6",13738332,13738332,"C","T","intergenic","LOC111096489;MIR8873A",null,"dist=36682;dist=244573"]
[7,"poor","chr6",27337885,27337885,"T","C","intergenic","LOC111096500;LOC111096501",null,"dist=40816;dist=132473"]
[7,"poor","chr6",28934278,28934278,"T","C","intronic","MKL2"]
[7,"poor","chr6",45238371,45238371,"C","G","intergenic","LOC111096361;LOC102152190",null,"dist=474289;dist=71338"]
[7,"poor","chr6",51890939,51890939,"T","C","intronic","DPYD"]
[7,"poor","chr6",64983932,64983942,"TGTGTGTGTGA","T","intergenic","LOC111096526;LOC111096432",null,"dist=98199;dist=181631"]
[7,"poor","chr7",4285202,4285202,"G","C","intergenic","PTPRC;ATP6V1G3",null,"dist=3051;dist=83274"]
[7,"poor","chr7",9952624,9952624,"A","G","UTR3","SLC30A1","NA","XM_003434930.4:c.*3645T>C"]
[7,"poor","chr7",23458444,23458444,"T","C","intronic","RFWD2"]
[7,"poor","chr7",27043833,27043833,"T","TG","intergenic","DNM3;METTL13",null,"dist=18894;dist=115592"]
[7,"poor","chr7",39616318,39616318,"C","G","intronic","DNAH14"]
[7,"poor","chr7",44800525,44800525,"C","T","intronic","LOXHD1"]
[7,"poor","chr7",62728777,62728777,"C","CACACACATATATATATATATATATATATATAT","intergenic","SS18;LOC102156192",null,"dist=157170;dist=154486"]
[7,"poor","chr7",74695281,74695281,"A","G","intergenic","PTPRM;RAB12",null,"dist=97783;dist=57416"]
[7,"poor","chr7",80843977,80843977,"T","C","intergenic","MAPK4;LOC403581",null,"dist=42765;dist=93456"]
[7,"poor","chr8",13284992,13284992,"C","G","intronic","LOC102151865"]
[7,"poor","chr8",15346201,15346201,"G","A","intronic","SLC25A21"]
[7,"poor","chr8",30770829,30770829,"A","G","intronic","GCH1"]
[7,"poor","chr8",42760623,42760623,"C","G","intronic","ACTN1"]
[7,"poor","chr8",48635762,48635762,"A","C","intronic","FLVCR2"]
[7,"poor","chr8",65445691,65445691,"G","GA","intronic","VRK1"]
[7,"poor","chr8",67746243,67746243,"G","A","intergenic","BCL11B;SETD3",null,"dist=32321;dist=75151"]
[7,"poor","chr9",1853135,1853137,"GTC","G","intronic","CBX2"]
[7,"poor","chr9",12680038,12680038,"A","G","intronic","BPTF"]
[7,"poor","chr9",22026003,22026003,"G","GCA","intronic","SMARCE1"]
[7,"poor","chr9",22090494,22090494,"C","A","UTR3","CCR7","NA","XM_022423004.1:c.*838C>A"]
[7,"poor","chr9",33170075,33170075,"A","G","intergenic","SEPT4;TEX14",null,"dist=7863;dist=4738"]
[7,"poor","chr9",47095544,47095544,"A","G","intergenic","LOC611352;COR1A3",null,"dist=32998;dist=25096"]
[7,"poor","chr9",51729919,51729919,"C","T","intronic","CFAP77"]
[7,"poor","chrX",1640109,1640109,"G","C","intergenic","ARSF;MXRA5",null,"dist=3783;dist=110790"]
[7,"poor","chrX",7246237,7246237,"A","T","intronic","MID1"]
[7,"poor","chrX",25936973,25936973,"G","C","intergenic","GK;TAB3",null,"dist=102511;dist=13098"]
[7,"poor","chrX",47547042,47547042,"A","T","intergenic","MIR8834B;KLF8",null,"dist=59185;dist=115782"]
[7,"poor","chrX",53350005,53350005,"T","G","intergenic","EFNB1;PJA1",null,"dist=46181;dist=258454"]
[7,"poor","chrX",67314337,67314337,"A","T","intergenic","LOC111094784;LOC612847",null,"dist=182400;dist=237812"]
[7,"poor","chrX",73904197,73904197,"G","A","intergenic","LOC111094894;PCDH19",null,"dist=844253;dist=275412"]
[7,"poor","chrX",88894134,88894134,"A","G","intergenic","AGTR2;SLC6A14",null,"dist=185683;dist=45042"]
[7,"poor","chrX",112164979,112164979,"C","A","intergenic","LOC492181;SLITRK4",null,"dist=506754;dist=629070"]
[7,"poor","chrX",120857199,120857199,"G","A","intergenic","ZNF185;LOC111094960",null,"dist=10344;dist=28257"]
[8,"poor","chr1",20087467,20087467,"G","A","intronic","TCF4"]
[8,"poor","chr1",28283337,28283337,"T","C","intergenic","LOC102152959;LOC102153582",null,"dist=1917;dist=49722"]
[8,"poor","chr1",68843694,68843694,"C","G","intronic","TMEM200A"]
[8,"poor","chr1",98637677,98637677,"C","T","intronic","FGD3"]
[8,"poor","chr1",106478388,106478388,"G","A","intergenic","MYH14;IZUMO2",null,"dist=18000;dist=24165"]
[8,"poor","chr10",6520630,6520630,"G","A","intergenic","LOC111097582;LOC102155476",null,"dist=173035;dist=61353"]
[8,"poor","chr10",16624810,16624810,"A","AGCGGGTGCTGGGACGTGATCAT","intronic","SHANK3"]
[8,"poor","chr10",48768423,48768426,"CAAG","C","intronic","RHOQ"]
[8,"poor","chr10",54401783,54401783,"A","T","ncRNA_intronic","LOC111097752"]
[8,"poor","chr11",16893112,16893112,"G","C","intronic","CCDC192"]
[8,"poor","chr11",27200483,27200483,"G","GTT","intergenic","RANBP6;IL33",null,"dist=150219;dist=19395"]
[8,"poor","chr11",50256420,50256420,"G","T","intronic","B4GALT1"]
[8,"poor","chr12",5861967,5861967,"G","C","intronic","CPNE5"]
[8,"poor","chr12",9291028,9291028,"T","C","intergenic","LRFN2;LOC111098252",null,"dist=42346;dist=96456"]
[8,"poor","chr12",41254096,41254100,"TGCTG","T","intergenic","BCKDHB;LOC102155357",null,"dist=29294;dist=23862"]
[8,"poor","chr12",53533293,53533297,"CTCTG","C","intergenic","LOC102151427;LOC102151477",null,"dist=49581;dist=235906"]
[8,"poor","chr13",8715191,8715193,"AAT","A","intronic","RSPO2"]
[8,"poor","chr13",26607977,26607977,"T","C","intergenic","LOC111098553;LOC111098450",null,"dist=105447;dist=127233"]
[8,"poor","chr13",51666609,51666609,"A","G","intergenic","LOC100683979;LOC111098476",null,"dist=477205;dist=261636"]
[8,"poor","chr14",18763208,18763208,"C","T","intronic","VPS50"]
[8,"poor","chr14",29633298,29633298,"C","T","intergenic","DGKB;AGMO",null,"dist=24160;dist=229713"]
[8,"poor","chr14",59306900,59306900,"T","A","intronic","CPED1"]
[8,"poor","chr15",24861676,24861676,"A","T","intronic","TMTC2"]
[8,"poor","chr15",35981529,35981529,"G","A","intronic","ELK3"]
[8,"poor","chr15",64071804,64071804,"A","G","intergenic","LOC111090137;LOC111098930",null,"dist=18642;dist=6495"]
[8,"poor","chr16",9523483,9523483,"G","C","intergenic","UBN2;TTC26",null,"dist=12558;dist=4753"]
[8,"poor","chr16",30318868,30318868,"G","C","intergenic","LOC111090290;LOC111090167",null,"dist=129498;dist=226185"]
[8,"poor","chr16",41337886,41337886,"A","C","intergenic","ASAH1;FRG1",null,"dist=2365;dist=23461"]
[8,"poor","chr17",12816510,12816510,"C","T","ncRNA_intronic","LOC111090419"]
[8,"poor","chr17",38406958,38406958,"A","C","intergenic","LOC111090626;RMND5A",null,"dist=6089;dist=1988"]
[8,"poor","chr17",48441230,48441230,"A","AG","intergenic","HK2;SEMA4F",null,"dist=111760;dist=38159"]
[8,"poor","chr18",16953467,16953467,"T","C","intronic","NAPEPLD"]
[8,"poor","chr18",20948703,20948703,"T","C","intergenic","LOC106559949;LOC111090803",null,"dist=115154;dist=128667"]
[8,"poor","chr18",40146727,40146727,"T","A","upstream","LOC483559",null,"dist=865"]
[8,"poor","chr19",17674716,17674716,"G","T","intergenic","IL21;LOC111091120",null,"dist=23441;dist=19066"]
[8,"poor","chr19",28125026,28125026,"A","G","intergenic","LOC100856628;LOC102155343",null,"dist=24582;dist=290888"]
[8,"poor","chr2",5709052,5709052,"T","TGC","intronic","LOC111091106"]
[8,"poor","chr2",9942985,9942985,"G","GT","intronic","C2H10orf67"]
[8,"poor","chr2",40559187,40559187,"G","A","intronic","LARS"]
[8,"poor","chr2",63456839,63456839,"A","G","ncRNA_intronic","LOC111092856"]
[8,"poor","chr2",72237152,72237154,"CCT","C","intronic","PTAFR"]
[8,"poor","chr20",15933797,15933797,"C","CCACTCAATGGAAAATAACACTATTTTT","intronic","CNTN6"]
[8,"poor","chr20",20960725,20960725,"A","G","intronic","FOXP1"]
[8,"poor","chr20",51184596,51184596,"G","T","intronic","FBXL12"]
[8,"poor","chr21",1900500,1900500,"A","C","intronic","CNTN5"]
[8,"poor","chr21",24670676,24670676,"T","C","intronic","FAM168A"]
[8,"poor","chr21",33517155,33517155,"A","G","intergenic","ADM;MIR8810",null,"dist=42683;dist=128281"]
[8,"poor","chr22",5998010,5998010,"T","G","intronic","GPALPP1"]
[8,"poor","chr22",38015121,38015121,"T","G","intergenic","SLITRK6;LOC102156659",null,"dist=96848;dist=1244621"]
[8,"poor","chr22",48086916,48086916,"C","T","ncRNA_intronic","LOC111091693"]
[8,"poor","chr23",15987513,15987515,"GAC","G","intronic","CMC1"]
[8,"poor","chr23",24027469,24027469,"T","C","ncRNA_intronic","LOC111091981"]
[8,"poor","chr23",50671829,50671829,"A","C","intergenic","LOC111091873;LOC111092017",null,"dist=17925;dist=21203"]
[8,"poor","chr24",26944924,26944924,"T","C","intergenic","LOC106557731;RALGAPB",null,"dist=9698;dist=3702"]
[8,"poor","chr24",37979509,37979509,"C","T","intergenic","SALL4;LOC111092194",null,"dist=19796;dist=141585"]
[8,"poor","chr25",14806256,14806256,"G","A","intronic","MIPEP"]
[8,"poor","chr25",26027081,26027081,"G","A","intergenic","DEFB136;CTSB",null,"dist=63073;dist=21156"]
[8,"poor","chr26",6279136,6279136,"T","A","intergenic","SBNO1;CDK2AP1",null,"dist=9730;dist=3935"]
[8,"poor","chr26",29941046,29941046,"A","ATT","intronic","CLTCL1"]
[8,"poor","chr27",1559408,1559408,"T","G","intergenic","CALCOCO1;LOC102153740",null,"dist=17152;dist=9516"]
[8,"poor","chr27",21853999,21853999,"C","G","ncRNA_intronic","LOC111092834"]
[8,"poor","chr27",31611121,31611121,"C","T","intergenic","RERG;PDE6H",null,"dist=84283;dist=29610"]
[8,"poor","chr28",14502843,14502843,"T","C","intronic","C28H10orf76"]
[8,"poor","chr28",39805198,39805198,"G","A","intergenic","TCERG1L;PPP2R2D",null,"dist=205506;dist=203566"]
[8,"poor","chr29",7956801,7956801,"A","AG","ncRNA_intronic","LOC111093234"]
[8,"poor","chr29",18943686,18943686,"G","T","intronic","SLCO5A1"]
[8,"poor","chr3",15108862,15108862,"A","T","intronic","KIAA0825"]
[8,"poor","chr3",42763545,42763545,"G","A","intergenic","LOC102154414;LOC111095364",null,"dist=41630;dist=180088"]
[8,"poor","chr3",47149653,47149656,"GGGT","G","intronic","CHD2"]
[8,"poor","chr3",79691627,79691627,"A","T","intergenic","LOC111095396;LOC111095397",null,"dist=621502;dist=86720"]
[8,"poor","chr30",138985,138985,"G","C","intergenic","LOC100683535;LOC487451",null,"dist=6511;dist=5956"]
[8,"poor","chr30",25230780,25230780,"G","C","intergenic","ANXA2;ICE2",null,"dist=20536;dist=12424"]
[8,"poor","chr31",10876874,10876874,"C","A","ncRNA_intronic","LOC102153814"]
[8,"poor","chr31",14052103,14052103,"A","G","intronic","CXADR"]
[8,"poor","chr31",37470101,37470101,"T","C","downstream","LOC111093457",null,"dist=380"]
[8,"poor","chr32",5469371,5469371,"G","GT","intergenic","PRKG2;RASGEF1B",null,"dist=103975;dist=76118"]
[8,"poor","chr32",25412016,25412024,"ACAGAGAGG","A","intergenic","LOC111093689;LOC111093607",null,"dist=240767;dist=11328"]
[8,"poor","chr33",15574889,15574890,"GA","G","intergenic","LOC111093801;LOC102155839",null,"dist=1255;dist=128859"]
[8,"poor","chr33",28307296,28307296,"A","G","intronic","ZNF148"]
[8,"poor","chr34",14086001,14086003,"CTG","C","intergenic","CCDC39;FXR1",null,"dist=126427;dist=43975"]
[8,"poor","chr34",27216426,27216426,"T","TGATGTAG","intronic","NMD3"]
[8,"poor","chr35",9848435,9848435,"T","C","intergenic","LOC111093987;LOC111094050",null,"dist=55742;dist=53058"]
[8,"poor","chr36",11034234,11034234,"G","A","intronic","TTC21B"]
[8,"poor","chr36",28349790,28349790,"G","A","intergenic","FSIP2;LOC111094255",null,"dist=78130;dist=311823"]
[8,"poor","chr37",17007269,17007269,"C","T","intergenic","PTH2R;LOC488494",null,"dist=248956;dist=118879"]
[8,"poor","chr37",27326885,27326885,"A","G","intergenic","LOC102151539;LOC111094326",null,"dist=103810;dist=32704"]
[8,"poor","chr38",20531085,20531085,"A","G","intronic","LOC609484"]
[8,"poor","chr4",6325562,6325562,"A","G","ncRNA_intronic","LOC111095693"]
[8,"poor","chr4",36440275,36440275,"G","C","intronic","UIMC1"]
[8,"poor","chr4",64875836,64875850,"TGTGTGTGTGTGTGC","T","intronic","HCN1"]
[8,"poor","chr4",78762551,78762551,"C","T","intergenic","LOC111095736;CDH9",null,"dist=140513;dist=390725"]
[8,"poor","chr5",23221582,23221582,"A","G","intergenic","LOC111095852;C5H11orf87",null,"dist=11665;dist=61852"]
[8,"poor","chr5",27744703,27744703,"A","C","intergenic","LOC111096104;LOC111095862",null,"dist=186549;dist=110786"]
[8,"poor","chr5",59554771,59554771,"A","G","intergenic","LOC111095968;LOC111095969",null,"dist=472022;dist=207058"]
[8,"poor","chr5",87827645,87827645,"G","T","ncRNA_intronic","LOC111096065"]
[8,"poor","chr6",8511895,8511895,"C","A","intergenic","COL26A1;LOC111096203",null,"dist=9586;dist=34718"]
[8,"poor","chr6",36941517,36941517,"C","G","intronic","DNAJA3"]
[8,"poor","chr6",40122178,40122178,"T","C","intronic","NME4"]
[8,"poor","chr6",74849220,74849220,"C","T","ncRNA_intronic","LOC102155681"]
[8,"poor","chr7",5985018,5985018,"T","A","intergenic","LOC111096602;IL19",null,"dist=36390;dist=15976"]
[8,"poor","chr7",30596813,30596813,"C","T","intronic","ADCY10"]
[8,"poor","chr7",41447705,41447705,"G","C","intergenic","IQGAP3;MEF2D",null,"dist=27176;dist=8066"]
[8,"poor","chr7",68435415,68435427,"TTGTCTCTGTATC","T","intergenic","LOC480186;LOC102152498",null,"dist=330647;dist=117759"]
[8,"poor","chr9",15135346,15135346,"A","G","intronic","WIPI1"]
[8,"poor","chr9",24858517,24858517,"C","T","UTR3","HOXB6",null,"XM_003435258.3:c.*537G>A"]
[8,"poor","chr9",47767735,47767739,"CACAG","C","intergenic","ATP2A3;LOC111097466",null,"dist=40718;dist=17226"]
[8,"poor","chr9",58775275,58775275,"A","G","ncRNA_intronic","LOC111097552"]
[8,"poor","chrX",18575238,18575238,"C","T","intergenic","LOC111094896;DDX53",null,"dist=268353;dist=200940"]
[8,"poor","chrX",44269679,44269679,"G","T","intergenic","LOC491890;LOC111094892",null,"dist=200929;dist=14583"]
[8,"poor","chrX",56373414,56373414,"T","C","intronic","HDAC8"]
[8,"poor","chrX",72681412,72681412,"C","T","intergenic","MIRLET7J;LOC111094894",null,"dist=1112766;dist=311846"]
[8,"poor","chrX",80832152,80832152,"A","G","intergenic","PIH1D3;FRMPD3",null,"dist=6361;dist=245090"]
[8,"poor","chrX",107709129,107709129,"C","CGGGA","intergenic","GPR101;ZIC3",null,"dist=404396;dist=112873"]
[10,"poor","chr1",2121237,2121238,"CT","C","intergenic","LOC111090560;LOC111092037",null,"dist=260776;dist=46211"]
[10,"poor","chr1",8573825,8573825,"T","G","intronic","DOK6"]
[10,"poor","chr1",11702787,11702787,"A","G","UTR3","CDH7",null,"XM_022413829.1:c.*3886T>C;XM_022413807.1:c.*3886T>C;XM_541069.6:c.*3886T>C"]
[10,"poor","chr1",14825267,14825267,"A","G","intergenic","PIGN;LOC609896",null,"dist=34046;dist=49906"]
[10,"poor","chr1",26783632,26783632,"G","A","intergenic","EYA4;TCF21",null,"dist=269031;dist=72649"]
[10,"poor","chr1",38704056,38704057,"AG","A","intergenic","LOC111095675;LOC111095681",null,"dist=16387;dist=92512"]
[10,"poor","chr1",43629501,43629501,"G","A","intergenic","LOC111090676;OPRM1",null,"dist=108547;dist=343414"]
[10,"poor","chr1",48316412,48316412,"T","C","intergenic","LOC111095873;RSPH3",null,"dist=49241;dist=12759"]
[10,"poor","chr1",57307751,57307751,"T","C","intergenic","RFX6;LOC111090702",null,"dist=10451;dist=16433"]
[10,"poor","chr1",67125642,67125642,"T","C","intergenic","LOC106558822;LOC111090710",null,"dist=2020;dist=266346"]
[10,"poor","chr1",75902166,75902167,"TA","T","intronic","FRMD3"]
[10,"poor","chr1",80090743,80090744,"CT","C","intergenic","LOC111096622;PSAT1",null,"dist=33015;dist=285725"]
[10,"poor","chr1",84897047,84897047,"A","G","ncRNA_intronic","LOC102153050"]
[10,"poor","chr1",94484527,94484527,"G","A","intergenic","LOC100687983;LOC609770",null,"dist=221430;dist=48560"]
[10,"poor","chr1",106840611,106840611,"A","T","intronic","CPT1C"]
[10,"poor","chr1",107993117,107993118,"TA","T","intergenic","ZNF114;CARD8",null,"dist=35255;dist=1097"]
[10,"poor","chr1",119212957,119212957,"G","A","intronic","SLC7A9"]
[10,"poor","chr11",5740794,5740798,"CCTGT","C","intronic","LVRN"]
[10,"poor","chr11",9442668,9442668,"A","G","intergenic","LOC102151165;LOC102155120",null,"dist=211537;dist=65987"]
[10,"poor","chr11",23227754,23227756,"AAG","A","intergenic","PITX1;LOC481514",null,"dist=152669;dist=142201"]
[10,"poor","chr11",27930109,27930109,"C","G","intronic","KDM4C"]
[10,"poor","chr11",32334667,32334667,"G","A","intergenic","LOC102152527;LOC111098039",null,"dist=314545;dist=613106"]
[10,"poor","chr11",34585584,34585584,"C","T","intronic","NFIB"]
[10,"poor","chr11",43171684,43171686,"TGC","T","intergenic","LOC111097944;IZUMO3",null,"dist=104765;dist=19347"]
[10,"poor","chr11",50791324,50791327,"AAAT","A","intronic","UBAP2"]
[10,"poor","chr11",54721937,54721937,"C","G","intronic","CCDC180"]
[10,"poor","chr11",64481507,64481507,"G","A","intergenic","LOC106559500;PTPN3",null,"dist=4577;dist=4786"]
[10,"poor","chr11",68892902,68892902,"A","C","ncRNA_intronic","LOC106559509"]
[10,"poor","chr12",2328483,2328484,"TA","T","intergenic","DLA-DQB1;DLA-DOB",null,"dist=20772;dist=48473"]
[10,"poor","chr12",6327694,6327694,"T","C","intronic","TBC1D22B"]
[10,"poor","chr12",21039823,21039823,"A","AT","intronic","GCLC"]
[10,"poor","chr12",28058876,28058876,"C","T","intronic","EYS"]
[10,"poor","chr12",29219557,29219558,"AT","A","intergenic","LOC111098303;LOC111098167",null,"dist=147091;dist=248399"]
[10,"poor","chr12",40861370,40861372,"TTA","T","intronic","ELOVL4"]
[10,"poor","chr12",42233970,42233971,"GT","G","ncRNA_intronic","LOC111098337"]
[10,"poor","chr12",53109099,53109099,"T","G","ncRNA_intronic","LOC102154281"]
[10,"poor","chr12",60725408,60725409,"CT","C","intergenic","LOC111098181;LOC481939",null,"dist=76439;dist=38392"]
[10,"poor","chr12",63005804,63005804,"T","TTATTTTTTTA","intergenic","LOC111098185;PRDM1",null,"dist=19072;dist=448438"]
[10,"poor","chr13",1357550,1357557,"TCCCTTTC","T","intronic","VPS13B"]
[10,"poor","chr13",3243522,3243523,"AT","A","intronic","GRHL2"]
[10,"poor","chr13",12784792,12784792,"T","A","intronic","CSMD3"]
[10,"poor","chr13",17248367,17248401,"TATATATATATATATATATATATATATATACACAC","T","intronic","EXT1"]
[10,"poor","chr13",29078043,29078043,"T","TC","ncRNA_intronic","LOC102153300"]
[10,"poor","chr13",40942542,40942543,"CA","C","intronic","KCTD8"]
[10,"poor","chr13",42064342,42064342,"G","A","ncRNA_intronic","LOC111098467"]
[10,"poor","chr13",51562020,51562020,"T","C","intergenic","LOC100683979;LOC111098476",null,"dist=372616;dist=366225"]
[10,"poor","chr13",53027948,53027948,"T","C","intronic","ADGRL3"]
[10,"poor","chr13",55685941,55685941,"T","C","intergenic","LOC102153987;LOC111098630",null,"dist=237167;dist=308996"]
[10,"poor","chr13",57914463,57914463,"G","GA","ncRNA_intronic","LOC111098631"]
[10,"poor","chr14",3027067,3027067,"G","A","intergenic","AKR1B1;LOC106559703",null,"dist=20126;dist=74721"]
[10,"poor","chr14",16786599,16786602,"TTTG","T","intronic","CDK14"]
[10,"poor","chr14",21574031,21574031,"T","C","intergenic","SLC25A13;SEM1",null,"dist=92264;dist=193074"]
[10,"poor","chr14",29095216,29095216,"C","A","intronic","DGKB"]
[10,"poor","chr14",32328617,32328617,"T","C","intergenic","LOC102153939;PRPS1L1",null,"dist=24724;dist=23572"]
[10,"poor","chr14",47139583,47139584,"TC","T","intergenic","LOC111098821;LOC111098822",null,"dist=148039;dist=52188"]
[10,"poor","chr14",53598954,53598957,"ATTT","A","intronic","FOXP2"]
[10,"poor","chr14",57931399,57931399,"T","A","intergenic","LOC111098706;LOC111098707",null,"dist=305960;dist=219161"]
[10,"poor","chr15",5299954,5299955,"GC","G","intergenic","LOC111098955;GRIK3",null,"dist=110978;dist=31791"]
[10,"poor","chr15",9184712,9184713,"TG","T","intronic","ZFYVE9"]
[10,"poor","chr15",20561092,20561092,"G","T","intronic","NAV3"]
[10,"poor","chr15",26934854,26934854,"T","C","intergenic","ALX1;MIR8838",null,"dist=76068;dist=51694"]
[10,"poor","chr15",29992361,29992361,"T","C","ncRNA_intronic","LOC111090024"]
[10,"poor","chr15",41189126,41189126,"G","A","ncRNA_intronic","LOC111090065"]
[10,"poor","chr15",46090626,46090628,"CTT","C","intronic","ARHGAP10"]
[10,"poor","chr15",57455847,57455848,"CT","C","intergenic","LOC111098923;LOC111098924",null,"dist=1088572;dist=333765"]
[10,"poor","chr16",542467,542467,"T","G","intergenic","LOC111090203;LOC106559836",null,"dist=15056;dist=464352"]
[10,"poor","chr16",3794514,3794514,"A","C","intronic","CNTNAP2"]
[10,"poor","chr16",7302811,7302812,"TA","T","intergenic","COR9A7;LOC100688918",null,"dist=7252;dist=29296"]
[10,"poor","chr16",16889115,16889116,"GT","G","intergenic","LOC111090259;LOC111090158",null,"dist=34980;dist=242273"]
[10,"poor","chr16",29401989,29401989,"T","C","intronic","UNC5D"]
[10,"poor","chr16",30334202,30334202,"A","G","intergenic","LOC111090290;LOC111090167",null,"dist=144832;dist=210851"]
[10,"poor","chr16",42154969,42154969,"C","CAGAGAA","intergenic","LOC111090178;TRIML1",null,"dist=402131;dist=799384"]
[10,"poor","chr16",45409771,45409771,"T","C","intronic","SNX25"]
[10,"poor","chr16",50893982,50893982,"A","G","intronic","LOC102157108"]
[10,"poor","chr16",58917760,58917760,"A","T","intergenic","LOC111090368;CBD139",null,"dist=15799;dist=6547"]
[10,"poor","chr17",2309425,2309427,"ATT","A","intronic","DCDC2C"]
[10,"poor","chr17",13641488,13641488,"G","A","intergenic","KCNS3;LOC111090509",null,"dist=303169;dist=97903"]
[10,"poor","chr17",18611208,18611210,"CTT","C","intergenic","FAM228B;ITSN2",null,"dist=3432;dist=16333"]
[10,"poor","chr17",28162584,28162584,"A","T","intergenic","LOC111090427;LOC111090428",null,"dist=29253;dist=286190"]
[10,"poor","chr17",41349439,41349439,"T","C","intergenic","LOC111090438;LOC102152789",null,"dist=471912;dist=117473"]
[10,"poor","chr17",43138596,43138596,"A","C","ncRNA_intronic","LOC102153033"]
[10,"poor","chr17",46647679,46647680,"TA","T","intronic","LRRTM4"]
[10,"poor","chr17",53749878,53749878,"C","CAG","ncRNA_intronic","LOC102156859"]
[10,"poor","chr17",61051075,61051076,"AT","A","upstream","S100A11",null,"dist=562"]
[10,"poor","chr18",8198255,8198255,"G","A","ncRNA_intronic","LOC102152764"]
[10,"poor","chr18",12709001,12709001,"A","G","intronic","DLD"]
[10,"poor","chr18",20529425,20529425,"T","C","exonic","SEMA3C","DELETERIOUS",null,"nonsynonymous SNV","SEMA3C:XM_533139.5:exon7:c.A716G:p.K239R,SEMA3C:XM_022405260.1:exon8:c.A716G:p.K239R"]
[10,"poor","chr18",22660243,22660244,"TA","T","intronic","PCLO"]
[10,"poor","chr18",29925132,29925132,"T","C","intergenic","LOC102151766;LOC111091020",null,"dist=50612;dist=17688"]
[10,"poor","chr18",30462294,30462294,"A","G","ncRNA_intronic","LOC111090810"]
[10,"poor","chr18",42108359,42108359,"C","T","intronic","CELF1"]
[10,"poor","chr18",52737195,52737195,"G","GC","upstream","CCDC88B",null,"dist=172"]
[10,"poor","chr19",974097,974097,"A","C","ncRNA_exonic","LOC111091084"]
[10,"poor","chr19",7834858,7834858,"A","G","intergenic","LOC111091101;PABPC4L",null,"dist=473640;dist=42957"]
[10,"poor","chr19",8463775,8463775,"T","C","intergenic","LOC111091047;PCDH10",null,"dist=471571;dist=207975"]
[10,"poor","chr19",15365647,15365648,"GA","G","intergenic","FAT4;LOC102153490",null,"dist=32826;dist=58575"]
[10,"poor","chr19",20212605,20212605,"G","A","intergenic","LOC111091126;LOC102156811",null,"dist=83814;dist=29729"]
[10,"poor","chr19",27665694,27665694,"A","T","ncRNA_intronic","LOC100682780"]
[10,"poor","chr19",36963452,36963453,"TA","T","intergenic","LOC111091168;LOC111091065",null,"dist=255233;dist=4901"]
[10,"poor","chr19",41066712,41066713,"CT","C","intergenic","HNMT;SPOPL",null,"dist=364214;dist=100798"]
[10,"poor","chr19",50172078,50172078,"G","T","intronic","MBD5"]
[10,"poor","chr2",577040,577040,"A","G","intergenic","LOC111091124;LOC102152672",null,"dist=24237;dist=471807"]
[10,"poor","chr2",12220543,12220543,"C","A","intronic","NEBL"]
[10,"poor","chr2",16033962,16033962,"T","C","intronic","SVIL"]
[10,"poor","chr2",27134034,27134044,"TTTTTTGTTTG","T","intergenic","LOC102153165;LOC111094524",null,"dist=876448;dist=533853"]
[10,"poor","chr2",41228347,41228349,"CTT","C","intronic","PPP2R2B"]
[10,"poor","chr2",46541077,46541086,"AAAAAAAAAC","A","intronic","PDE4D"]
[10,"poor","chr2",56648686,56648686,"A","T","intronic","ARHGEF28"]
[10,"poor","chr2",60622559,60622561,"TGC","T","upstream","LOC111092787",null,"dist=821"]
[10,"poor","chr2",73675067,73675067,"G","A","intronic","CRYBG2"]
[10,"poor","chr2",82894168,82894168,"C","T","intergenic","LOC111093979;LOC111093983",null,"dist=243080;dist=35281"]
[10,"poor","chr21",859417,859417,"A","G","intergenic","ARHGAP42;LOC111091473",null,"dist=17331;dist=36564"]
[10,"poor","chr21",6492687,6492687,"A","G","intronic","MRE11"]
[10,"poor","chr21",10587984,10587984,"A","G","intergenic","FOLH1;LOC111091493",null,"dist=121822;dist=14644"]
[10,"poor","chr21",21626457,21626457,"G","A","UTR3","CAPN5","NA","XM_022407653.1:c.*1941C>T;XM_005633462.2:c.*1941C>T;XM_022407651.1:c.*1941C>T;XM_542293.6:c.*1941C>T;XM_022407650.1:c.*1941C>T;XM_005633461.2:c.*1941C>T"]
[10,"poor","chr21",31601704,31601709,"TTTTTA","T","intronic","TUB"]
[10,"poor","chr21",36150859,36150860,"CT","C","intergenic","LOC111091561;ARNTL",null,"dist=42404;dist=103375"]
[10,"poor","chr21",45032690,45032690,"A","G","intergenic","LOC111091613;LOC106560181",null,"dist=396135;dist=292387"]
[10,"poor","chr21",46950881,46950881,"T","TA","intergenic","LOC102153887;LOC111091616",null,"dist=372047;dist=69901"]
[10,"poor","chr22",6578401,6578401,"A","G","intergenic","SERP2;LOC106557580",null,"dist=17421;dist=27433"]
[10,"poor","chr22",13327290,13327290,"T","A","intergenic","LOC111091836;LOC111091631",null,"dist=87253;dist=531915"]
[10,"poor","chr22",14835825,14835825,"A","G","intergenic","LOC111091632;LOC111091633",null,"dist=435587;dist=428316"]
[10,"poor","chr22",18507823,18507823,"A","T","intergenic","LOC610091;LOC100682783",null,"dist=137474;dist=143930"]
[10,"poor","chr22",22470949,22470949,"C","A","intergenic","LOC111091645;LOC111091787",null,"dist=130793;dist=268817"]
[10,"poor","chr22",28981069,28981069,"T","G","ncRNA_intronic","LOC111091654"]
[10,"poor","chr22",35434203,35434203,"A","G","intergenic","LOC111091780;LOC111091757",null,"dist=110071;dist=698945"]
[10,"poor","chr22",36561246,36561246,"A","G","intergenic","SLITRK1;LOC111091758",null,"dist=231462;dist=485343"]
[10,"poor","chr22",37956205,37956205,"A","G","intergenic","SLITRK6;LOC102156659",null,"dist=37932;dist=1303537"]
[10,"poor","chr22",40492041,40492041,"A","G","intergenic","LOC111091760;LOC111091676",null,"dist=256659;dist=1036741"]
[10,"poor","chr22",47524405,47524405,"A","G","intergenic","OXGR1;MBNL2",null,"dist=147016;dist=43930"]
[10,"poor","chr22",53440753,53440753,"C","A","intergenic","LOC102151553;LOC111091705",null,"dist=36684;dist=38731"]
[10,"poor","chr22",58167447,58167447,"G","A","intergenic","LOC111091772;LOC111091773",null,"dist=61125;dist=10326"]
[10,"poor","chr23",1571149,1571150,"TA","T","intronic","GINS1"]
[10,"poor","chr23",12104119,12104119,"G","A","intronic","POMGNT2"]
[10,"poor","chr23",26410645,26410645,"A","G","intronic","RFTN1"]
[10,"poor","chr23",31474784,31474784,"A","C","intergenic","KY;EPHB1",null,"dist=103722;dist=10917"]
[10,"poor","chr23",41153479,41153479,"C","A","intergenic","LOC111091885;LOC111091976",null,"dist=714711;dist=92325"]
[10,"poor","chr23",45000296,45000296,"C","T","intergenic","LOC111091851;LOC111091990",null,"dist=48041;dist=23655"]
[10,"poor","chr24",2462419,2462419,"T","C","intergenic","LOC111092150;LOC111092206",null,"dist=35528;dist=12445"]
[10,"poor","chr24",13872088,13872088,"T","C","intronic","PLCB1"]
[10,"poor","chr24",18017445,18017623,"TGGAGCCTGCTTCTCCCTCTGCCTGTGTCTCTGCCTCTCTCTCTCTCTCTCTCTCTCTGGGGGTCTCTTTGAATCATAAATTAAATCTTTAAAAAAAAGGTTTTAAATTATTTATTCATGAGAGCCACAGATTGAGAGAGGCAAAGACACAGCCAGATGGAGAAGCAGGCTCCATGCAG","T","intronic","C24H20orf194"]
[10,"poor","chr24",27097625,27097625,"C","T","intergenic","LOC111092221;SLC32A1",null,"dist=11786;dist=44528"]
[10,"poor","chr24",31901390,31901392,"GTA","G","intronic","HNF4A"]
[10,"poor","chr24",42290710,42290710,"T","A","intronic","BMP7"]
[10,"poor","chr24",43967704,43967704,"T","A","intronic","ZNF831"]
[10,"poor","chr25",8802248,8802248,"A","G","intergenic","LOC111092301;B3GLCT",null,"dist=23439;dist=13433"]
[10,"poor","chr25",19655396,19655398,"GAA","G","intergenic","CBR4;LOC106557783",null,"dist=37252;dist=167582"]
[10,"poor","chr25",22332380,22332382,"TTA","T","intergenic","LOC111092440;GALNTL6",null,"dist=777361;dist=207747"]
[10,"poor","chr25",35269153,35269154,"TA","T","intronic","XPO7"]
[10,"poor","chr25",37040316,37040316,"A","G","intergenic","SLC18A1;LPL",null,"dist=136259;dist=37990"]
[10,"poor","chr25",49064477,49064477,"G","A","intergenic","LOC111092420;LOC111092473",null,"dist=21062;dist=1192"]
[10,"poor","chr27",1805210,1805211,"AT","A","UTR3","SP1","NA","XM_022411220.1:c.*1766_*1765delinsT;XM_014108420.2:c.*1766_*1765delinsT;XM_005636771.2:c.*1766_*1765delinsT"]
[10,"poor","chr27",11957086,11957086,"A","C","ncRNA_intronic","LOC111092725"]
[10,"poor","chr27",25634354,25634355,"CA","C","ncRNA_intronic","LOC106557914"]
[10,"poor","chr27",27270612,27270612,"C","T","intergenic","PDE3A;AEBP2",null,"dist=391988;dist=383529"]
[10,"poor","chr27",38233761,38233761,"G","A","intronic","CD4"]
[10,"poor","chr27",43460402,43460404,"CTT","C","intronic","ERC1"]
[10,"poor","chr28",7726342,7726343,"TA","T","intronic","MYOF"]
[10,"poor","chr28",21448687,21448687,"G","GA","intronic","ADD3"]
[10,"poor","chr28",23773865,23773866,"CT","C","intronic","VTI1A"]
[10,"poor","chr28",37671154,37671154,"A","G","ncRNA_intronic","LOC111093030"]
[10,"poor","chr29",360729,360729,"A","G","intergenic","UBE2V2;LOC111093117",null,"dist=1671;dist=221453"]
[10,"poor","chr29",13384526,13384526,"T","TA","intergenic","YTHDF3;LOC111093147",null,"dist=104491;dist=424986"]
[10,"poor","chr29",14630753,14630755,"ATT","A","intergenic","CYP7B1;LOC111093165",null,"dist=16914;dist=273030"]
[10,"poor","chr29",25125860,25125860,"T","G","intergenic","LOC111093254;LOC111093110",null,"dist=73478;dist=105061"]
[10,"poor","chr29",31199420,31199421,"AT","A","intronic","RALYL"]
[10,"poor","chr29",34367528,34367528,"A","T","intergenic","MMP16;LOC111093211",null,"dist=159968;dist=177232"]
[10,"poor","chr3",822732,822735,"CTTT","C","ncRNA_intronic","LOC111094979"]
[10,"poor","chr3",5348770,5348770,"A","G","ncRNA_exonic","LOC111095071"]
[10,"poor","chr3",16161639,16161640,"CT","C","ncRNA_intronic","LOC102151391"]
[10,"poor","chr3",24617127,24617128,"AT","A","intergenic","TMEM167A;LOC102155938",null,"dist=47503;dist=95347"]
[10,"poor","chr3",28904227,28904228,"GA","G","intergenic","LOC111095167;LOC111095353",null,"dist=117459;dist=8524"]
[10,"poor","chr3",39002209,39002209,"A","G","intronic","TJP1"]
[10,"poor","chr3",42818013,42818014,"AT","A","intergenic","LOC102154414;LOC111095364",null,"dist=96098;dist=125619"]
[10,"poor","chr3",53892253,53892268,"AAAAAAAAAAAAAAAC","A","intronic","ZSCAN2"]
[10,"poor","chr3",64729662,64729666,"GGTTT","G","intergenic","FBXL5;CC2D2A",null,"dist=2501;dist=1499"]
[10,"poor","chr3",70425270,70425270,"A","T","intronic","STK32B"]
[10,"poor","chr3",74667150,74667150,"A","G","intronic","NWD2"]
[10,"poor","chr3",80219863,80219863,"T","C","intronic","PCDH7"]
[10,"poor","chr3",82143777,82143777,"A","G","ncRNA_intronic","LOC102153629"]
[10,"poor","chr3",89801371,89801372,"TA","T","ncRNA_intronic","LOC111095408"]
[10,"poor","chr30",2003013,2003013,"A","G","ncRNA_intronic","LOC111093319"]
[10,"poor","chr30",7089277,7089278,"CT","C","intronic","GPR176"]
[10,"poor","chr30",15982771,15982771,"T","C","intronic","ATP8B4"]
[10,"poor","chr30",29792916,29792918,"TAA","T","intergenic","LOC111093262;DPP8",null,"dist=2276;dist=9398"]
[10,"poor","chr30",34424521,34424523,"TAA","T","intronic","UACA"]
[10,"poor","chr31",2304154,2304174,"AGAGAGAGAGAGAGAGAGAGG","A","intronic","CADM2"]
[10,"poor","chr31",3787601,3787601,"A","G","intergenic","LOC106558098;LOC100686103",null,"dist=29071;dist=410840"]
[10,"poor","chr31",7092314,7092314,"T","C","intergenic","GBE1;LOC106558085",null,"dist=1081433;dist=139286"]
[10,"poor","chr31",15531379,15531379,"T","C","intergenic","LOC111093442;LOC106558100",null,"dist=218332;dist=694879"]
[10,"poor","chr31",16809393,16809393,"C","A","intergenic","LOC106558100;NCAM2",null,"dist=313180;dist=103375"]
[10,"poor","chr31",20661077,20661078,"AT","A","ncRNA_intronic","LOC111093531"]
[10,"poor","chr31",24759242,24759246,"CAAGA","C","intronic","GRIK1"]
[10,"poor","chr31",36343039,36343039,"C","CCA","intronic","C2CD2"]
[10,"poor","chr32",8240562,8240562,"A","G","intergenic","LOC111093658;LOC111093673",null,"dist=113849;dist=4631"]
[10,"poor","chr32",10939223,10939223,"A","G","intronic","SPARCL1"]
[10,"poor","chr32",15171593,15171593,"T","A","ncRNA_intronic","LOC111093620"]
[10,"poor","chr32",16273892,16273892,"A","G","intronic","GRID2"]
[10,"poor","chr32",27192084,27192084,"C","G","intergenic","GIMD1;LOC102157046",null,"dist=68986;dist=312139"]
[10,"poor","chr32",34998848,34998848,"A","T","intergenic","LOC487911;LOC111093695",null,"dist=392085;dist=207346"]
[10,"poor","chr32",35922532,35922532,"A","G","intergenic","LOC100687259;LOC111093624",null,"dist=106221;dist=114180"]
[10,"poor","chr33",2520612,2520612,"A","G","intergenic","LOC102155005;LOC111093770",null,"dist=306219;dist=89782"]
[10,"poor","chr33",5167506,5167508,"TTC","T","intergenic","LOC102156426;LOC100684793",null,"dist=8235;dist=17038"]
[10,"poor","chr33",16458872,16458879,"TTAAAATA","T","intergenic","PLCXD2;PHLDB2",null,"dist=65911;dist=62208"]
[10,"poor","chr33",18092284,18092286,"GTT","G","intronic","ATP6V1A"]
[10,"poor","chr33",29243302,29243302,"C","T","intergenic","TFRC;LOC111093761",null,"dist=6081;dist=41604"]
[10,"poor","chr34",5716226,5716226,"A","G","intergenic","LOC111093954;MTRR",null,"dist=172455;dist=352346"]
[10,"poor","chr34",11021230,11021230,"G","A","intergenic","MRPL36;LOC102152290",null,"dist=19026;dist=79693"]
[10,"poor","chr34",25747408,25747409,"TA","T","intronic","LOC478678"]
[10,"poor","chr34",27781293,27781293,"T","C","intergenic","LOC102155815;LOC102155898",null,"dist=195760;dist=598066"]
[10,"poor","chr34",36231044,36231044,"T","G","ncRNA_intronic","LOC111093904"]
[10,"poor","chr34",40929724,40929724,"A","G","ncRNA_intronic","LOC111093844"]
[10,"poor","chr35",7104550,7104553,"TTTA","T","intergenic","LOC111094020;RREB1",null,"dist=70688;dist=15952"]
[10,"poor","chr35",20486925,20486925,"C","A","intronic","LOC102151579"]
[10,"poor","chr35",21989149,21989149,"T","C","intergenic","LOC102151835;LOC111094009",null,"dist=207654;dist=174431"]
[10,"poor","chr36",8486477,8486478,"CT","C","intergenic","KCNH7;LOC111094305",null,"dist=225584;dist=123316"]
[10,"poor","chr36",12302294,12302294,"T","C","intronic","B3GALT1"]
[10,"poor","chr36",23739006,23739006,"A","G","intergenic","CWC22;LOC111094258",null,"dist=323947;dist=228112"]
[10,"poor","chr36",27824206,27824207,"AG","A","intergenic","LOC111094291;LOC111094208",null,"dist=102273;dist=77121"]
[10,"poor","chr37",8909275,8909275,"T","C","intergenic","LOC106558336;LOC111094372",null,"dist=9493;dist=166983"]
[10,"poor","chr37",19602059,19602059,"G","A","intronic","ERBB4"]
[10,"poor","chr37",24406042,24406042,"G","A","ncRNA_intronic","LOC106558312"]
[10,"poor","chr38",4116842,4116842,"C","T","intergenic","LOC111094563;LOC106558354",null,"dist=105471;dist=354355"]
[10,"poor","chr38",8160242,8160242,"T","C","ncRNA_intronic","LOC111094533"]
[10,"poor","chr38",17158349,17158349,"T","C","intergenic","LOC111094551;LOC111094532",null,"dist=69713;dist=13815"]
[10,"poor","chr5",2194571,2194572,"TA","T","intronic","OPCML"]
[10,"poor","chr5",6174941,6174941,"T","C","intronic","ETS1"]
[10,"poor","chr5",16737050,16737051,"TA","T","intergenic","SIK3;APOA1",null,"dist=3791;dist=3020"]
[10,"poor","chr5",22263113,22263113,"A","G","intronic","ARHGAP20"]
[10,"poor","chr5",36224185,36224185,"G","A","intronic","MAP2K4"]
[10,"poor","chr5",48127536,48127552,"AAAAAAAAAAAAAAAAG","A","intronic","PATJ"]
[10,"poor","chr5",52861168,52861168,"C","T","intergenic","PRKAA2;LOC102156441",null,"dist=6096;dist=15829"]
[10,"poor","chr5",67882502,67882502,"C","A","intronic","COTL1"]
[10,"poor","chr5",70370109,70370109,"G","A","intronic","CMIP"]
[10,"poor","chr5",81227766,81227770,"CTTTT","C","UTR3","SLC7A6OS",null,"XM_848670.4:c.*645_*649delinsC"]
[10,"poor","chr5",87238731,87238732,"AT","A","intergenic","LOC111096064;LOC111096065",null,"dist=294542;dist=579879"]
[10,"poor","chr6",1544170,1544171,"GA","G","upstream","CALN1",null,"dist=980"]
[10,"poor","chr6",7333975,7333976,"TG","T","intronic","STYXL1"]
[10,"poor","chr6",17078769,17078769,"T","C","intergenic","FUS;PRSS36",null,"dist=7542;dist=18227"]
[10,"poor","chr6",31059438,31059439,"TA","T","intronic","ZC3H7A"]
[10,"poor","chr6",35142112,35142124,"TTTTTTTTTTTTA","T","intronic","RBFOX1"]
[10,"poor","chr6",44473150,44473151,"TG","T","intergenic","NTNG1;PRMT6",null,"dist=66032;dist=2678"]
[10,"poor","chr6",47507732,47507732,"A","C","intronic","COL11A1"]
[10,"poor","chr6",57864904,57864906,"GAA","G","intergenic","LOC111096402;LOC106558965",null,"dist=25493;dist=31640"]
[10,"poor","chr6",66035761,66035761,"T","C","intronic","ADGRL2"]
[10,"poor","chr6",67681709,67681709,"T","C","intergenic","LOC111096530;LOC111096531",null,"dist=15622;dist=44500"]
[10,"poor","chr6",75840393,75840393,"T","C","intronic","LRRC7"]
[10,"poor","chr7",3662683,3662684,"CT","C","ncRNA_intronic","LOC111096596"]
[10,"poor","chr7",14411968,14411968,"C","G","intronic","KIAA1614"]
[10,"poor","chr7",28271750,28271750,"T","G","intergenic","LOC111096666;LOC102156736",null,"dist=29796;dist=150647"]
[10,"poor","chr7",32479736,32479736,"T","C","intronic","RGS7"]
[10,"poor","chr7",43097732,43097732,"C","G","intronic","NUP210L"]
[10,"poor","chr7",47890126,47890126,"A","T","intronic","RIT2"]
[10,"poor","chr7",57740750,57740751,"TA","T","intronic","TRAPPC8"]
[10,"poor","chr7",61992228,61992228,"A","AT","intergenic","AQP4;LOC111096790",null,"dist=123275;dist=46476"]
[10,"poor","chr7",66457995,66457995,"G","A","intronic","ESCO1"]
[10,"poor","chr7",74504240,74504241,"TA","T","intronic","PTPRM"]
[10,"poor","chr7",78351813,78351813,"T","C","upstream","SEH1L",null,"dist=340"]
[10,"poor","chr8",6902929,6902929,"A","G","intergenic","LOC106559148;LOC111096973",null,"dist=363742;dist=459433"]
[10,"poor","chr8",10892306,10892307,"CT","C","intronic","NUBPL"]
[10,"poor","chr8",18679424,18679430,"AAAAAGC","A","intergenic","LOC102156547;LOC111097208",null,"dist=828219;dist=147675"]
[10,"poor","chr8",24987716,24987716,"A","AGAGAGC","intergenic","LOC102152571;LOC106559131",null,"dist=331781;dist=452469"]
[10,"poor","chr8",29202892,29202893,"TA","T","intergenic","LOC100686500;LOC111097038",null,"dist=60212;dist=11898"]
[10,"poor","chr8",42428945,42428945,"A","G","intergenic","LOC111097084;LOC111097083",null,"dist=48140;dist=78278"]
[10,"poor","chr8",43995291,43995291,"C","A","intergenic","LOC111097225;COX16",null,"dist=53093;dist=11241"]
[10,"poor","chr8",55383541,55383542,"GT","G","intergenic","LOC106559186;LOC111097126",null,"dist=30105;dist=24648"]
[10,"poor","chr8",57166596,57166597,"CA","C","ncRNA_exonic","LOC106559187"]
[10,"poor","chr8",65696081,65696081,"A","G","intergenic","VRK1;LOC111097244",null,"dist=144733;dist=623139"]
[10,"poor","chr8",74246223,74246223,"A","G","intergenic","LOC100683065;LOC490896",null,"dist=396368;dist=44529"]
[10,"poor","chr9",1394866,1394866,"A","G","UTR3","NPTX1","NA","XM_540475.5:c.*477A>G"]
[10,"poor","chr9",13770319,13770321,"CAG","C","intronic","PRKCA"]
[10,"poor","chr9",18127535,18127535,"T","C","intronic","LOC102153402"]
[10,"poor","chr9",26628566,26628566,"A","G","intronic","LUC7L3"]
[10,"poor","chr9",39188098,39188098,"C","T","intronic","ASIC2"]
[10,"poor","chr9",43865240,43865240,"G","C","intronic","SSH2"]
[10,"poor","chr9",53818792,53818793,"GT","G","intronic","FNBP1"]
[10,"poor","chr9",58885208,58885208,"T","G","ncRNA_intronic","LOC102152949"]
[10,"poor","chrX",5431772,5431772,"G","T","ncRNA_intronic","LOC111094756"]
[10,"poor","chrX",9502548,9502548,"T","C","downstream","LOC111094667",null,"dist=116"]
[10,"poor","chrX",21255865,21255865,"T","C","intronic","LOC491786"]
[10,"poor","chrX",27380831,27380831,"A","G","intronic","DMD"]
[10,"poor","chrX",29011962,29011962,"A","G","intergenic","LOC111094964;LOC491808",null,"dist=522270;dist=443246"]
[10,"poor","chrX",36131755,36131755,"G","T","intronic","CASK"]
[10,"poor","chrX",41208976,41208977,"CT","C","intronic","SYN1"]
[10,"poor","chrX",54030580,54030581,"TA","T","intergenic","FAM155B;EDA",null,"dist=32306;dist=48113"]
[10,"poor","chrX",61822734,61822735,"GC","G","intergenic","LOC111094831;FAM46D",null,"dist=50849;dist=9998"]
[10,"poor","chrX",63944270,63944270,"G","GA","intergenic","LOC106558391;POU3F4",null,"dist=206753;dist=482891"]
[10,"poor","chrX",69598165,69598165,"A","C","intergenic","FAM133A;DIAPH2",null,"dist=274762;dist=396509"]
[10,"poor","chrX",70410642,70410642,"T","C","intronic","DIAPH2"]
[10,"poor","chrX",76306029,76306029,"T","C","intronic","GPRASP1"]
[10,"poor","chrX",83534198,83534198,"T","A","intergenic","AMMECR1;LOC102153208",null,"dist=16633;dist=42460"]
[10,"poor","chrX",88008717,88008718,"GT","G","intergenic","LRCH2;LUZP4",null,"dist=40059;dist=32663"]
[10,"poor","chrX",89531317,89531317,"T","C","intergenic","LOC111094817;LOC111094911",null,"dist=187882;dist=161596"]
[10,"poor","chrX",97085965,97085965,"T","G","intergenic","LOC102157013;LOC492114",null,"dist=381012;dist=309086"]
[10,"poor","chrX",106248831,106248832,"CT","C","intergenic","LOC102153069;LOC102153161",null,"dist=47450;dist=3896"]
[10,"poor","chrX",112480185,112480186,"AT","A","intergenic","LOC492181;SLITRK4",null,"dist=821960;dist=313863"]
[10,"poor","chrX",114854341,114854341,"T","C","intergenic","MIR8908F;LOC102152097",null,"dist=137141;dist=182474"]
[10,"poor","chrX",119989832,119989832,"G","A","intergenic","GABRE;LOC492221",null,"dist=51965;dist=41010"]
[2,"good","chr1",12352459,12352459,"T","C","intergenic","LOC111093733;LOC111093764",null,"dist=434578;dist=414528"]
[2,"good","chr1",39583280,39583280,"A","T","intergenic","LOC102155455;UST",null,"dist=12833;dist=49996"]
[2,"good","chr1",49706444,49706444,"T","TGTTCAGAAGACCACAGGAGCCTGA","intergenic","MAP3K4;AGPAT4","NA","dist=4155;dist=2993"]
[2,"good","chr1",71842498,71842498,"A","T","intronic","C1H9orf3"]
[2,"good","chr1",82067381,82067381,"C","T","intronic","RFK"]
[2,"good","chr1",99847985,99847985,"T","C","intronic","ZSCAN1"]
[2,"good","chr1",114671559,114671559,"C","CTT","intronic","KCNK6"]
[2,"good","chr1",121778853,121778853,"A","G","intergenic","LOC111098431;PLEKHF1",null,"dist=4818;dist=1765"]
[2,"good","chr10",18316756,18316756,"G","A","intergenic","LOC102157395;LOC102151191",null,"dist=60949;dist=78145"]
[2,"good","chr10",23593291,23593291,"A","C","exonic","MEI1","TOLERATED",null,"nonsynonymous SNV","MEI1:XM_022424363.1:exon7:c.T450G:p.D150E,MEI1:XM_014117315.2:exon8:c.T882G:p.D294E,MEI1:XM_014117316.2:exon8:c.T882G:p.D294E,MEI1:XM_014117317.2:exon8:c.T882G:p.D294E,MEI1:XM_014117318.2:exon8:c.T882G:p.D294E,MEI1:XM_014117319.2:exon8:c.T882G:p.D294E,MEI1:XM_014117320.2:exon8:c.T882G:p.D294E,MEI1:XM_022424360.1:exon8:c.T882G:p.D294E,MEI1:XM_022424361.1:exon8:c.T882G:p.D294E,MEI1:XM_022424362.1:exon8:c.T882G:p.D294E,MEI1:XM_022424364.1:exon8:c.T882G:p.D294E,MEI1:XM_022424365.1:exon8:c.T882G:p.D294E,MEI1:XM_847006.5:exon8:c.T882G:p.D294E"]
[2,"good","chr10",35014306,35014306,"G","A","intronic","CCDC138"]
[2,"good","chr10",66254266,66254266,"C","T","intergenic","LOC111097800;LOC111097801",null,"dist=54679;dist=1771"]
[2,"good","chr11",3499369,3499369,"C","CAAGGA","intronic","B4GALT7"]
[2,"good","chr11",20976327,20976327,"A","AGG","intronic","IL4"]
[2,"good","chr11",29448211,29448211,"A","T","intronic","PTPRD"]
[2,"good","chr11",56872881,56872881,"T","C","intergenic","NR4A3;STX17",null,"dist=25884;dist=12993"]
[2,"good","chr11",74121676,74121676,"C","CCAAGAAGGGGAGAGT","intronic","CNTRL"]
[2,"good","chr12",7203952,7203952,"T","TA","intronic","BTBD9"]
[2,"good","chr12",27599361,27599361,"G","T","intronic","EYS"]
[2,"good","chr12",42072019,42072019,"C","G","intergenic","LOC111098335;LOC111098337",null,"dist=270944;dist=157696"]
[2,"good","chr13",1068173,1068173,"T","G","ncRNA_intronic","LOC111098488"]
[2,"good","chr13",4589198,4589198,"A","G","intergenic","ATP6V1C1;LOC111098506",null,"dist=19698;dist=8837"]
[2,"good","chr13",34985539,34985539,"C","CTCCACAGCTCCAGGTCCCTGTCCTCTGGGCTGTGGAGAGTGCT","intronic","TRAPPC9"]
[2,"good","chr13",44283466,44283466,"G","T","ncRNA_intronic","LOC102153367"]
[2,"good","chr14",2275920,2275920,"T","G","intergenic","LOC100686002;OR2M9",null,"dist=3159;dist=75714"]
[2,"good","chr14",35658138,35658138,"G","C","intronic","DNAH11"]
[2,"good","chr14",45139365,45139366,"GC","G","intronic","LOC102155480"]
[2,"good","chr15",8008450,8008450,"C","G","intronic","CSMD2"]
[2,"good","chr15",16179208,16179208,"C","CCATGCAGGGAG","intergenic","KLF17;LOC111098989",null,"dist=18660;dist=26045"]
[2,"good","chr15",38636831,38636831,"T","C","intronic","ANKS1B"]
[2,"good","chr16",2276342,2276342,"G","T","intronic","CNTNAP2"]
[2,"good","chr16",9977146,9977146,"A","AGC","intronic","SVOPL"]
[2,"good","chr16",23221140,23221140,"T","C","intronic","SLC20A2"]
[2,"good","chr16",30999483,30999483,"T","TCTCC","ncRNA_intronic","LOC111090294"]
[2,"good","chr16",50388677,50388677,"G","GACCC","intergenic","LOC111090187;LOC111090354",null,"dist=111905;dist=293491"]
[2,"good","chr16",56292803,56292803,"C","A","intronic","CSMD1"]
[2,"good","chr17",15547424,15547424,"T","C","intergenic","RHOB;LOC111090519",null,"dist=107631;dist=24906"]
[2,"good","chr17",34734648,34734648,"A","C","intronic","KCNIP3"]
[2,"good","chr17",42555206,42555206,"G","A","intergenic","LOC111090439;LOC111090440",null,"dist=50239;dist=32134"]
[2,"good","chr17",61363940,61363940,"G","GGGAACTATCAACTAACTAAAAGACAACTACAGAATGGGAGAAGATGTTT","intergenic","LOC483211;CRNN",null,"dist=40881;dist=16766"]
[2,"good","chr18",4424513,4424513,"G","GTCTTGC","ncRNA_intronic","LOC111090861"]
[2,"good","chr18",28990070,28990070,"T","C","intergenic","LRRC4C;LOC111090808",null,"dist=138583;dist=605514"]
[2,"good","chr18",39484667,39484667,"G","T","intergenic","LOC100683985;LOC100684702",null,"dist=6894;dist=13850"]
[2,"good","chr18",49290469,49290469,"A","ACC","intronic","PPP6R3"]
[2,"good","chr2",14895339,14895339,"A","G","intergenic","KIF5B;LOC106560124",null,"dist=14443;dist=61998"]
[2,"good","chr2",17665438,17665438,"A","C","intergenic","LOC111091395;MPP7",null,"dist=8632;dist=127726"]
[2,"good","chr2",42305346,42305346,"C","CA","intronic","SPINK5"]
[2,"good","chr2",60869693,60869693,"T","C","intergenic","LOC111094664;IRX5",null,"dist=79244;dist=87660"]
[2,"good","chr2",68456802,68456802,"T","C","intergenic","RNF19B;TMEM54",null,"dist=21586;dist=1687"]
[2,"good","chr2",85040878,85040878,"C","T","intergenic","TARDBP;LOC102151465",null,"dist=42742;dist=66689"]
[2,"good","chr20",1632316,1632316,"G","C","intergenic","LOC111091221;LOC102154894",null,"dist=29081;dist=21940"]
[2,"good","chr20",24863672,24863672,"A","G","intergenic","LOC111091283;LRIG1",null,"dist=108809;dist=44232"]
[2,"good","chr20",40411163,40411163,"C","A","intronic","IP6K2"]
[2,"good","chr20",46307689,46307699,"CACACAGAGAG","C","intergenic","FAM32A;CIB3",null,"dist=9698;dist=4885"]
[2,"good","chr20",52833980,52833980,"C","G","intronic","CERS4"]
[2,"good","chr21",10886661,10886661,"T","TGTGGATAGTTTGAG","intronic","TYR"]
[2,"good","chr21",34016255,34016255,"G","C","upstream","ZBED5",null,"dist=121"]
[2,"good","chr21",41390088,41390088,"C","G","ncRNA_intronic","LOC102152187"]
[2,"good","chr22",8013014,8013014,"C","T","intergenic","EPSTI1;FAM216B",null,"dist=56937;dist=41198"]
[2,"good","chr22",25534945,25534945,"C","CTTGTTA","intergenic","LOC111091751;DACH1",null,"dist=190813;dist=155755"]
[2,"good","chr22",55452961,55452961,"G","C","intergenic","LOC111091707;EFNB2",null,"dist=186165;dist=115031"]
[2,"good","chr23",14474004,14474004,"A","G","intronic","RBMS3"]
[2,"good","chr23",24787597,24787597,"G","A","ncRNA_intronic","LOC111091969"]
[2,"good","chr23",45798851,45798851,"T","A","exonic","P2RY14","TOLERATED",null,"synonymous SNV","P2RY14:XM_005634570.3:exon1:c.A516T:p.I172I"]
[2,"good","chr24",2587328,2587328,"G","A","intergenic","LOC111092228;RALGAPA2",null,"dist=2567;dist=88996"]
[2,"good","chr24",24672519,24672519,"C","CTGCTT","intergenic","LOC111092104;PHF20",null,"dist=15740;dist=2187"]
[2,"good","chr24",38581379,38581379,"T","TCCTG","intergenic","LOC111092162;LOC111092084",null,"dist=247665;dist=71445"]
[2,"good","chr24",45348536,45348536,"T","A","ncRNA_intronic","LOC102154319"]
[2,"good","chr25",14233773,14233773,"T","A","intergenic","MTMR6;AMER2",null,"dist=12083;dist=47618"]
[2,"good","chr25",23897753,23897753,"G","T","intronic","GALNT7"]
[2,"good","chr25",46647788,46647788,"T","TG","ncRNA_intronic","LOC111092466"]
[2,"good","chr26",7110681,7110681,"G","A","intronic","VPS33A"]
[2,"good","chr26",13309451,13309451,"G","T","intergenic","LOC102152877;LOC111092596",null,"dist=20188;dist=36836"]
[2,"good","chr26",25686223,25686223,"G","A","intergenic","LOC111092572;LOC612180",null,"dist=9196;dist=333446"]
[2,"good","chr26",31018274,31018274,"G","C","intronic","MAPK1"]
[2,"good","chr27",6771037,6771037,"T","C","intronic","COL2A1"]
[2,"good","chr27",8599304,8599304,"T","C","intergenic","LOC102155300;LOC111092890",null,"dist=10201;dist=168155"]
[2,"good","chr27",30498253,30498253,"A","ATGAGAGTG","intronic","SLC15A5"]
[2,"good","chr27",36234375,36234375,"A","C","intergenic","CD69;CLEC2D",null,"dist=29330;dist=44552"]
[2,"good","chr28",4068993,4068993,"T","G","intergenic","LOC102157023;BMS1",null,"dist=35263;dist=109632"]
[2,"good","chr28",26539390,26539394,"GCTCC","G","intronic","ATRNL1"]
[2,"good","chr28",29844752,29844752,"C","CT","intergenic","BAG3;INPP5F",null,"dist=29286;dist=33737"]
[2,"good","chr29",9744252,9744252,"C","T","intronic","TOX"]
[2,"good","chr29",20070944,20070944,"A","T","intergenic","LOC111093222;EYA1",null,"dist=48402;dist=105362"]
[2,"good","chr3",2069545,2069545,"G","T","ncRNA_intronic","LOC111095337"]
[2,"good","chr3",36093121,36093122,"TC","T","ncRNA_intronic","LOC111095183"]
[2,"good","chr3",43699335,43699341,"CAGAAAG","C","ncRNA_intronic","LOC106558607"]
[2,"good","chr3",59528547,59528547,"A","C","intronic","SORCS2"]
[2,"good","chr3",68193708,68193708,"A","G","intergenic","LOC111095271;HS3ST1",null,"dist=260429;dist=112804"]
[2,"good","chr30",272031,272031,"T","C","intergenic","LOC100688948;LOC100683887","DELETERIOUS","dist=34883;dist=86224"]
[2,"good","chr30",15031886,15031886,"T","G","intronic","CEP152"]
[2,"good","chr30",31947477,31947477,"G","A","exonic","SKOR1","NA",null,"nonsynonymous SNV","SKOR1:XM_022412722.1:exon14:c.G3458A:p.C1153Y"]
[2,"good","chr31",13502315,13502315,"T","C","ncRNA_intronic","LOC102154980"]
[2,"good","chr31",26187091,26187091,"A","ACATC","intronic","TIAM1"]
[2,"good","chr32",4455703,4455703,"A","C","intergenic","PRDM8;FGF5",null,"dist=4203;dist=53107"]
[2,"good","chr32",15661105,15661105,"T","C","intronic","GRID2"]
[2,"good","chr33",10985740,10985740,"C","T","intronic","ALCAM"]
[2,"good","chr34",644429,644429,"C","T","intergenic","LOC111093863;DNAH5",null,"dist=58187;dist=171659"]
[2,"good","chr34",9928368,9928368,"T","C","intergenic","LOC111093822;LOC111093922",null,"dist=8647;dist=223288"]
[2,"good","chr34",38063596,38063596,"C","T","intronic","NLGN1"]
[2,"good","chr35",59335,59335,"C","T","ncRNA_exonic","LOC102155899"]
[2,"good","chr35",23319705,23319705,"A","T","intronic","CARMIL1"]
[2,"good","chr36",16845678,16845678,"A","G","ncRNA_intronic","LOC102153796"]
[2,"good","chr36",26620662,26620662,"T","G","intergenic","LOC102155713;LOC111094210",null,"dist=144707;dist=581414"]
[2,"good","chr37",27171209,27171210,"TG","T","intergenic","LOC111094357;LOC102151539",null,"dist=338567;dist=50744"]
[2,"good","chr37",30076771,30076771,"T","C","intergenic","LOC111094435;ERICH1",null,"dist=134341;dist=27456"]
[2,"good","chr4",453614,453614,"C","A","intergenic","LOC488951;LOC100687367",null,"dist=15120;dist=4032"]
[2,"good","chr4",22483295,22483295,"T","TGTCACTGAGTGTGACAAGAA","intronic","CDH23"]
[2,"good","chr4",31882106,31882106,"A","T","intergenic","NRG3;LOC100855666",null,"dist=324508;dist=31862"]
[2,"good","chr4",38600947,38600947,"A","C","intergenic","LOC102155173;CPEB4",null,"dist=1299;dist=3118"]
[2,"good","chr4",59359432,59359432,"A","C","UTR3","ARHGEF37","NA","XM_005619308.3:c.*1158T>G;XM_005619307.3:c.*1158T>G;XM_546309.6:c.*1158T>G"]
[2,"good","chr5",4517144,4517146,"CAG","C","UTR3","ADAMTS8","NA","XM_022418062.1:c.*550_*552delinsC"]
[2,"good","chr5",11094116,11094116,"G","GGGGGGA","intergenic","GRAMD1B;LOC106558763",null,"dist=111850;dist=42385"]
[2,"good","chr5",26066266,26066266,"A","C","intergenic","GUCY1A2;LOC111096103",null,"dist=347348;dist=8227"]
[2,"good","chr5",32661425,32661425,"G","A","intronic","DNAH2"]
[2,"good","chr5",48286537,48286537,"T","A","intronic","TM2D1"]
[2,"good","chr5",64067522,64067522,"A","T","intronic","ANKRD11"]
[2,"good","chr5",70434213,70434215,"TCA","T","intergenic","LOC111096020;LOC102154784",null,"dist=7199;dist=33820"]
[2,"good","chr5",87550734,87550734,"C","A","intergenic","LOC111096064;LOC111096065",null,"dist=606545;dist=267877"]
[2,"good","chr6",5838992,5838992,"T","G","intronic","GTF2I"]
[2,"good","chr6",22152225,22152225,"A","T","exonic","ERN2","TOLERATED",null,"synonymous SNV","ERN2:XM_022419946.1:exon2:c.A30T:p.P10P,ERN2:XM_547090.6:exon2:c.A99T:p.P33P"]
[2,"good","chr6",35650262,35650262,"G","A","UTR5","RBFOX1",null,"XM_005621573.3:c.-321C>T"]
[2,"good","chr6",42281485,42281485,"A","T","intronic","GNAI3"]
[2,"good","chr6",61930003,61930003,"A","C","intergenic","ODF2L;COL24A1",null,"dist=150666;dist=1269"]
[2,"good","chr6",73066469,73066469,"G","A","intergenic","LOC111096535;LOC111096536",null,"dist=393748;dist=25751"]
[2,"good","chr7",22122776,22122776,"C","T","intergenic","LOC102156735;LOC102155251",null,"dist=230722;dist=64456"]
[2,"good","chr7",40753355,40753357,"ATG","A","intronic","LOC111096929"]
[2,"good","chr7",47408955,47408955,"G","A","ncRNA_intronic","LOC111096757"]
[2,"good","chr7",73829772,73829772,"A","G","intergenic","LOC102156870;PTPRM",null,"dist=76690;dist=175910"]
[2,"good","chr8",1037895,1037895,"G","A","intronic","CATSPERB"]
[2,"good","chr8",31774415,31774415,"C","T","ncRNA_intronic","LOC111097043"]
[2,"good","chr8",49541783,49541783,"C","T","intergenic","LOC111097115;LOC102156146",null,"dist=94146;dist=87493"]
[2,"good","chr8",61776190,61776190,"G","A","intronic","LOC111097188"]
[2,"good","chr8",68024469,68024469,"A","T","ncRNA_exonic","LOC111097160"]
[2,"good","chr9",5088679,5088679,"G","C","intergenic","LOC111097294;GRB2",null,"dist=20631;dist=19449"]
[2,"good","chr9",23441260,23441260,"A","G","intronic","CWC25"]
[2,"good","chr9",25182182,25182182,"G","C","intergenic","GIP;IGF2BP1",null,"dist=7780;dist=17105"]
[2,"good","chr9",45265422,45265431,"ATATTTGCTT","A","intergenic","LOC111097455;RPH3AL",null,"dist=3499;dist=50282"]
[2,"good","chr9",51118847,51118847,"G","C","intergenic","OLFM1;LOC106559330",null,"dist=122077;dist=25342"]
[2,"good","chrX",1176153,1176153,"C","CCGAGACA","intronic","DHRSX"]
[3,"good","chr1",3109091,3109091,"T","A","intergenic","LOC102156552;LOC111092376",null,"dist=19205;dist=20073"]
[3,"good","chr1",6272882,6272882,"T","C","ncRNA_intronic","LOC111093150"]
[3,"good","chr1",27178795,27178795,"C","CA","intronic","SGK1"]
[3,"good","chr1",34580138,34580138,"A","G","intergenic","HIVEP2;LOC106559598",null,"dist=19861;dist=14204"]
[3,"good","chr1",51935921,51935921,"T","C","intronic","QKI"]
[3,"good","chr1",75124830,75124830,"G","A","intergenic","SLC28A3;LOC111096474",null,"dist=31852;dist=20071"]
[3,"good","chr1",83516231,83516235,"GATCA","G","intronic","RORB"]
[3,"good","chr1",98627801,98627801,"G","A","intronic","FGD3"]
[3,"good","chr1",104355499,104355499,"C","T","intergenic","LOC106559035;LOC102151412",null,"dist=8358;dist=100516"]
[3,"good","chr1",118076129,118076130,"GA","G","intronic","LSM14A"]
[3,"good","chr10",2139931,2139931,"A","G","intergenic","ATP23;LOC111097578",null,"dist=144959;dist=349596"]
[3,"good","chr10",21464087,21464087,"A","G","intronic","KIAA1644"]
[3,"good","chr10",36758036,36758036,"G","T","intergenic","LOC100682742;LOC102154849",null,"dist=71115;dist=80623"]
[3,"good","chr10",45147044,45147044,"C","T","intronic","CNNM3"]
[3,"good","chr10",66812664,66812664,"T","C","intergenic","LOC102155303;LOC106559424",null,"dist=155425;dist=203298"]
[3,"good","chr11",1691830,1691830,"C","A","intronic","RNF130"]
[3,"good","chr11",17492656,17492659,"CTTT","C","intronic","FBN2"]
[3,"good","chr11",31754277,31754277,"C","T","intergenic","LOC111097934;LOC102152527",null,"dist=42154;dist=127645"]
[3,"good","chr11",37725247,37725247,"T","C","intronic","SH3GL2"]
[3,"good","chr11",57793738,57793738,"T","G","intronic","PLPPR1"]
[3,"good","chr11",60144614,60144614,"T","A","intronic","SMC2"]
[3,"good","chr12",6102770,6102770,"A","G","intergenic","FGD2;LOC111098240",null,"dist=10798;dist=4090"]
[3,"good","chr12",20545855,20545855,"A","C","intronic","FBXO9"]
[3,"good","chr12",28002380,28002380,"A","G","intronic","EYS"]
[3,"good","chr12",49636559,49636559,"C","T","intergenic","LOC106559572;LOC111098358",null,"dist=5504;dist=25837"]
[3,"good","chr12",52154338,52154338,"T","A","intronic","EPHA7"]
[3,"good","chr13",1652122,1652122,"G","A","intronic","VPS13B"]
[3,"good","chr13",8498362,8498362,"G","A","intergenic","LOC111098519;RSPO2",null,"dist=99956;dist=111865"]
[3,"good","chr13",24748785,24748785,"A","C","intergenic","LOC111098551;LOC102151705",null,"dist=360945;dist=275476"]
[3,"good","chr13",31950916,31950917,"GT","G","intergenic","LOC111098454;LOC100685453",null,"dist=125848;dist=119075"]
[3,"good","chr13",47949268,47949268,"A","T","intronic","NMU"]
[3,"good","chr13",58934500,58934500,"T","A","upstream","LOC106559641",null,"dist=223"]
[3,"good","chr14",9368546,9368546,"G","T","intronic","GRM8"]
[3,"good","chr14",24075299,24075299,"G","T","intronic","NXPH1"]
[3,"good","chr14",31058547,31058547,"G","T","ncRNA_intronic","LOC102152602"]
[3,"good","chr14",50806543,50806543,"A","G","intronic","IMMP2L"]
[3,"good","chr15",2719207,2719208,"AT","A","intergenic","TMCO2;RLF",null,"dist=1662;dist=4303"]
[3,"good","chr15",8904475,8904475,"T","C","intronic","ZCCHC11"]
[3,"good","chr15",24083352,24083352,"G","T","intergenic","LOC106559753;CCDC59",null,"dist=120848;dist=281158"]
[3,"good","chr15",31963070,31963070,"T","G","intergenic","DCN;LOC482600",null,"dist=75371;dist=31723"]
[3,"good","chr15",53578420,53578420,"G","T","intergenic","LOC111090110;LOC111090003",null,"dist=72078;dist=137325"]
[3,"good","chr16",6789861,6789861,"G","A","intergenic","PRSS2;LOC111090221",null,"dist=8457;dist=14308"]
[3,"good","chr16",13076837,13076837,"T","G","upstream","AGBL3",null,"dist=402"]
[3,"good","chr16",27664049,27664049,"T","TG","intergenic","ERLIN2;ZNF703",null,"dist=24242;dist=5457"]
[3,"good","chr16",35328290,35328290,"C","T","intergenic","LOC111090311;PPP1R3B",null,"dist=63210;dist=44638"]
[3,"good","chr16",54081061,54081061,"G","C","intergenic","LOC609268;LOC609310",null,"dist=24708;dist=16981"]
[3,"good","chr17",7621246,7621246,"C","A","intronic","ATP6V1C2"]
[3,"good","chr17",11542856,11542856,"C","CT","intergenic","LOC111090418;LOC111090503",null,"dist=42046;dist=148835"]
[3,"good","chr17",22510217,22510217,"G","C","intronic","PLB1"]
[3,"good","chr17",39209889,39209889,"A","T","intergenic","ST3GAL5;ATOH8",null,"dist=4228;dist=45836"]
[3,"good","chr17",59079337,59079337,"A","G","ncRNA_intronic","LOC111090708"]
[3,"good","chr17",61591408,61591408,"C","T","ncRNA_exonic","LOC102151682"]
[3,"good","chr18",15585451,15585451,"T","A","intergenic","LOC111090903;LOC111090906",null,"dist=29175;dist=311575"]
[3,"good","chr18",23729547,23729547,"G","C","ncRNA_intronic","LOC111090918"]
[3,"good","chr18",38128148,38128148,"G","GAGGAGC","exonic","LOC483480","NA",null,"nonframeshift substitution","LOC483480:XM_540598.2:exon1:c.817delinsGAGGAGC:p.V273delinsEEL"]
[3,"good","chr19",1399252,1399252,"T","C","intergenic","IL15;LOC111091040",null,"dist=34490;dist=92464"]
[3,"good","chr19",4626675,4626675,"G","A","ncRNA_intronic","LOC111091098"]
[3,"good","chr19",22378764,22378764,"G","T","intergenic","HS6ST1;UGGT1",null,"dist=6300;dist=36628"]
[3,"good","chr19",29306308,29306310,"CAT","C","intronic","GLI2"]
[3,"good","chr19",47282895,47282895,"A","ATTTT","intergenic","LOC111091191;LOC111091193",null,"dist=34792;dist=114627"]
[3,"good","chr2",13452882,13452882,"A","T","intronic","MALRD1"]
[3,"good","chr2",19732217,19732217,"T","A","intronic","TRDMT1"]
[3,"good","chr2",37266416,37266416,"C","A","ncRNA_intronic","LOC102153902"]
[3,"good","chr2",44472608,44472608,"A","C","intergenic","LOC111092278;ACTBL2",null,"dist=136768;dist=41416"]
[3,"good","chr2",58434083,58434083,"T","C","intronic","CSNK2A2"]
[3,"good","chr2",79381438,79381438,"G","GGCCCACACACGGGCTGACCGCA","intronic","EMC1"]
[3,"good","chr20",1774801,1774805,"CAGAA","C","intronic","MGLL"]
[3,"good","chr20",15007992,15007992,"C","G","intronic","CNTN4"]
[3,"good","chr20",23069344,23069344,"G","A","intergenic","FAM19A4;FAM19A1",null,"dist=105622;dist=58827"]
[3,"good","chr20",41836960,41836960,"C","A","upstream","NBEAL2",null,"dist=674"]
[3,"good","chr20",44557741,44557741,"T","C","intronic","ELL"]
[3,"good","chr21",2598691,2598691,"G","A","intergenic","LOC111091474;LOC111091515",null,"dist=127980;dist=1520180"]
[3,"good","chr21",17300994,17300994,"G","A","intergenic","LOC100685935;LOC111091620",null,"dist=270514;dist=214243"]
[3,"good","chr21",25501740,25501740,"A","T","intronic","ARAP1"]
[3,"good","chr21",45206057,45206057,"C","A","intergenic","LOC111091613;LOC106560181",null,"dist=569502;dist=119020"]
[3,"good","chr21",47349471,47349471,"T","C","UTR3","MUC15",null,"XM_005633761.3:c.*2058A>G;XM_022407944.1:c.*2058A>G;XM_022407943.1:c.*2058A>G"]
[3,"good","chr22",18099556,18099556,"A","T","intergenic","LOC111091789;LOC610091",null,"dist=48592;dist=230701"]
[3,"good","chr22",33450427,33450427,"A","G","intergenic","LOC111091671;LOC111091754",null,"dist=8262;dist=14332"]
[3,"good","chr22",39842004,39842004,"A","G","intergenic","LOC111091759;LOC102156840",null,"dist=41528;dist=288789"]
[3,"good","chr22",50047176,50047176,"T","A","intronic","PCCA"]
[3,"good","chr22",61360044,61360044,"G","C","intronic","UPF3A"]
[3,"good","chr23",19155850,19155850,"A","G","intergenic","LOC111091909;THRB",null,"dist=52483;dist=122800"]
[3,"good","chr23",27105961,27105961,"G","C","intronic","LOC608697"]
[3,"good","chr23",47486683,47486683,"T","A","intergenic","P2RY1;LOC102151520",null,"dist=233480;dist=11345"]
[3,"good","chr24",16753182,16753182,"T","TA","intronic","RASSF2"]
[3,"good","chr24",18846976,18846976,"G","T","intergenic","LOC111092201;STK35",null,"dist=1760;dist=66770"]
[3,"good","chr24",37029816,37029816,"T","G","intronic","RIPOR3"]
[3,"good","chr24",44995409,44995409,"G","A","intergenic","LOC111092169;LOC111092160",null,"dist=176540;dist=262744"]
[3,"good","chr25",11661551,11661551,"T","A","intronic","FLT3"]
[3,"good","chr25",17769122,17769124,"GTT","G","intergenic","CRYL1;GJB6",null,"dist=35368;dist=142912"]
[3,"good","chr25",36819139,36819139,"A","ATGCCTC","intergenic","LZTS1;ATP6V1B2",null,"dist=4935;dist=14107"]
[3,"good","chr25",51412076,51412076,"G","C","intronic","FARP2"]
[3,"good","chr26",6852675,6852675,"A","G","intronic","KNTC1"]
[3,"good","chr26",21517944,21517944,"A","G","intronic","TTC28"]
[3,"good","chr26",27043400,27043401,"AT","A","intronic","LOC607368"]
[3,"good","chr27",2955608,2955609,"GC","G","UTR5","NR4A1","NA","NM_001003227.1:c.-2895_-2896delinsC"]
[3,"good","chr27",20682282,20682282,"A","G","intronic","FGFR1OP2"]
[3,"good","chr27",27256416,27256416,"A","G","intergenic","PDE3A;AEBP2",null,"dist=377792;dist=397725"]
[3,"good","chr27",42254847,42254847,"C","G","intronic","IQSEC3"]
[3,"good","chr28",3206553,3206553,"G","A","intergenic","LOC102155499;ZNF32",null,"dist=15532;dist=277951"]
[3,"good","chr28",21950183,21950183,"T","C","intergenic","SMC3;RBM20",null,"dist=21816;dist=21241"]
[3,"good","chr28",38849345,38849345,"A","G","intergenic","LOC102152832;LOC111093021",null,"dist=80199;dist=225515"]
[3,"good","chr29",3705095,3705095,"G","T","intronic","PXDNL"]
[3,"good","chr29",11045800,11045806,"CCTCTCT","C","intergenic","RAB2A;LOC102152807",null,"dist=3011;dist=22040"]
[3,"good","chr29",26493173,26493173,"C","G","ncRNA_intronic","LOC106558028"]
[3,"good","chr3",6121920,6121920,"A","C","intergenic","LOC608563;LOC111095090",null,"dist=79511;dist=31076"]
[3,"good","chr3",26689026,26689026,"A","G","intronic","ZFYVE16"]
[3,"good","chr3",33440858,33440858,"C","T","intronic","GABRG3"]
[3,"good","chr3",40064068,40064068,"G","T","intronic","LRRK1"]
[3,"good","chr3",58125304,58125304,"G","C","intergenic","CTSH;MORF4L1",null,"dist=11346;dist=1848"]
[3,"good","chr3",79686381,79686381,"A","C","intergenic","LOC111095396;LOC111095397",null,"dist=616256;dist=91966"]
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[3,"good","chr8",41102005,41102005,"G","A","intronic","GPHN"]
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[4,"good","chr1",1463012,1463012,"G","A","ncRNA_intronic","LOC111092007"]
[4,"good","chr1",9920533,9920534,"TG","T","intergenic","TMX3;LOC111090592",null,"dist=480594;dist=24475"]
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[4,"good","chr17",22975450,22975450,"A","G","intronic","CLIP4"]
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[4,"good","chr18",28306933,28306936,"GTGT","G","intronic","LRRC4C"]
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[4,"good","chr18",38611110,38611110,"C","T","intronic","UBE2L6"]
[4,"good","chr18",45872006,45872006,"A","G","ncRNA_intronic","LOC106560001"]
[4,"good","chr18",47627357,47627357,"G","GA","intronic","SHANK2"]
[4,"good","chr18",52149774,52149774,"G","A","intronic","SAC3D1"]
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[4,"good","chr2",16012161,16012161,"G","T","intronic","SVIL"]
[4,"good","chr2",20095556,20095556,"G","T","intronic","RSU1"]
[4,"good","chr2",25354328,25354328,"C","T","intronic","CELF2"]
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[4,"good","chr2",35130925,35130925,"G","A","intronic","NRG2"]
[4,"good","chr2",40753206,40753212,"GCCTCTT","G","intergenic","RBM27;POU4F3",null,"dist=43465;dist=9287"]
[4,"good","chr2",42872933,42872933,"C","T","intergenic","PLPP1;SLC38A9",null,"dist=18418;dist=48973"]
[4,"good","chr2",48531520,48531520,"T","C","ncRNA_intronic","LOC102152511"]
[4,"good","chr2",55386301,55386301,"A","T","intergenic","PTCD2;ZNF366",null,"dist=3420;dist=69118"]
[4,"good","chr2",57407802,57407802,"T","G","downstream","LOC102151858;MIR8813-2",null,"dist=743"]
[4,"good","chr2",62905252,62905252,"G","T","intergenic","LOC111094670;LOC111092850",null,"dist=175498;dist=16053"]
[4,"good","chr2",65147720,65147720,"T","C","exonic","PAPD5","TOLERATED",null,"nonsynonymous SNV","PAPD5:XM_005617576.2:exon1:c.A106G:p.T36A,PAPD5:XM_005617577.2:exon1:c.A106G:p.T36A,PAPD5:XM_022411501.1:exon1:c.A106G:p.T36A,PAPD5:XM_535307.6:exon1:c.A106G:p.T36A"]
[4,"good","chr2",71161345,71161345,"G","GC","ncRNA_intronic","LOC111093203"]
[4,"good","chr2",75429922,75429922,"T","C","intergenic","LOC111093525;IFNLR1",null,"dist=76834;dist=1920"]
[4,"good","chr2",77594185,77594185,"G","GA","intronic","ALPL"]
[4,"good","chr2",81991221,81991221,"G","A","UTR3","DNAJC16",null,"XM_005617968.3:c.*2197C>T;XM_022414343.1:c.*2197C>T;XM_014111382.2:c.*2197C>T;XM_544556.6:c.*2197C>T"]
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[4,"good","chr21",6133273,6133273,"T","G","intronic","AMOTL1"]
[4,"good","chr21",11873648,11873648,"C","A","intergenic","LOC111091495;LOC111091496",null,"dist=38866;dist=472940"]
[4,"good","chr21",14563336,14563336,"T","A","intronic","DLG2"]
[4,"good","chr21",17211094,17211094,"T","C","intergenic","LOC100685935;LOC111091620",null,"dist=180614;dist=304143"]
[4,"good","chr21",22430477,22430477,"C","T","intergenic","LOC106560155;LOC111091462",null,"dist=1978;dist=11694"]
[4,"good","chr21",28062733,28062735,"AGG","A","intergenic","COR51X4;LOC610378",null,"dist=2320;dist=5998"]
[4,"good","chr21",29239845,29239846,"TC","T","intergenic","LOC485316;LOC100686348",null,"dist=21609;dist=11103"]
[4,"good","chr21",35680010,35680010,"C","T","intronic","TEAD1"]
[4,"good","chr21",37905839,37905839,"A","G","intergenic","CRSP-2;CALCA",null,"dist=94115;dist=9327"]
[4,"good","chr21",44174820,44174821,"TG","T","ncRNA_intronic","LOC102153391"]
[4,"good","chr22",1244891,1244891,"A","G","intergenic","RNASEH2B;LOC111091782",null,"dist=234412;dist=17403"]
[4,"good","chr22",2224946,2224946,"A","C","intronic","RCBTB1"]
[4,"good","chr22",9462247,9462247,"T","A","intergenic","LOC111091826;LOC102153124",null,"dist=62440;dist=4460"]
[4,"good","chr22",12692241,12692241,"C","G","intergenic","LOC111091835;LOC111091836",null,"dist=453150;dist=454718"]
[4,"good","chr22",19659455,19659455,"A","T","ncRNA_intronic","LOC111091639"]
[4,"good","chr22",28167557,28167558,"CA","C","intronic","KLF12"]
[4,"good","chr22",32000150,32000150,"A","C","upstream","LOC111091761",null,"dist=59"]
[4,"good","chr22",38143001,38143001,"G","A","intergenic","SLITRK6;LOC102156659",null,"dist=224728;dist=1116741"]
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[4,"good","chr22",47206594,47206594,"C","T","intergenic","UGGT2;LOC111091690",null,"dist=614999;dist=46787"]
[4,"good","chr22",50125992,50125992,"G","A","intronic","PCCA"]
[4,"good","chr22",58248871,58248871,"T","C","intergenic","IRS2;LOC111091785",null,"dist=19845;dist=109997"]
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[4,"good","chr23",3973337,3973337,"C","G","ncRNA_intronic","LOC111091877"]
[4,"good","chr23",9680454,9680454,"C","T","intronic","MYRIP"]
[4,"good","chr23",12203593,12203593,"A","G","intergenic","POMGNT2;MIR8806",null,"dist=34247;dist=31331"]
[4,"good","chr23",20478929,20478929,"G","C","intronic","UBE2E2"]
[4,"good","chr23",26711366,26711370,"TAATA","T","intergenic","LOC111091941;LOC111091923",null,"dist=42138;dist=25110"]
[4,"good","chr23",29476389,29476389,"A","T","intronic","DNAJC13"]
[4,"good","chr23",36719571,36719571,"G","C","intronic","TRIM42"]
[4,"good","chr23",37658790,37658790,"A","G","intergenic","GRK7;ATP1B3",null,"dist=20524;dist=25717"]
[4,"good","chr23",45327055,45327055,"C","G","intergenic","ERICH6;SIAH2",null,"dist=5817;dist=39288"]
[4,"good","chr23",50910545,50910545,"A","T","intronic","VEPH1"]
[4,"good","chr24",1393255,1393255,"T","A","intergenic","LOC102151159;LOC102151210",null,"dist=77751;dist=33176"]
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[4,"good","chr24",9738545,9738545,"A","T","intergenic","SPTLC3;LOC102152494",null,"dist=141001;dist=45603"]
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[4,"good","chr24",19182825,19182825,"A","C","ncRNA_intronic","LOC102156897"]
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[4,"good","chr24",31309744,31309750,"TTCTCCC","T","ncRNA_intronic","LOC111092244"]
[4,"good","chr24",37168161,37168161,"T","A","intronic","BCAS4"]
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[4,"good","chr25",13795816,13795816,"A","G","intronic","ATP8A2"]
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[4,"good","chr25",35853384,35853384,"A","T","ncRNA_intronic","LOC102154197"]
[4,"good","chr25",38724249,38724249,"T","C","intronic","NYAP2"]
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[4,"good","chr3",56949151,56949151,"G","GGA","ncRNA_intronic","LOC111095238"]
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[4,"good","chr5",33231631,33231631,"C","A","intronic","NDEL1"]
[4,"good","chr5",35588654,35588654,"C","T","intronic","SHISA6"]
[4,"good","chr5",41138724,41138724,"G","T","intronic","PRPSAP2"]
[4,"good","chr5",48055798,48055798,"A","T","intronic","PATJ"]
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[4,"good","chr5",71102733,71102733,"G","A","intronic","CDYL2"]
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[4,"good","chr5",79688219,79688219,"A","G","ncRNA_intronic","LOC111096049"]
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[4,"good","chr6",8046042,8046042,"G","T","intronic","CUX1"]
[4,"good","chr6",12831153,12831153,"A","G","intronic","LOC479761"]
[4,"good","chr6",15254453,15254453,"A","T","intergenic","MAD1L1;LOC111096239",null,"dist=18259;dist=15909"]
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[4,"good","chr6",42711581,42711581,"T","A","intergenic","TMEM167B;TAF13",null,"dist=9446;dist=4577"]
[4,"good","chr6",43866324,43866324,"T","A","intronic","VAV3"]
[4,"good","chr6",53072824,53072824,"T","C","intergenic","LOC111096515;LOC102155973",null,"dist=27662;dist=35963"]
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[4,"good","chr6",61496967,61496967,"T","C","ncRNA_intronic","LOC102152701"]
[4,"good","chr6",69392094,69392094,"A","G","intronic","AK5"]
[4,"good","chr6",71623130,71623132,"AAT","A","intergenic","LHX8;TYW3",null,"dist=267279;dist=11236"]
[4,"good","chr7",2840369,2840369,"T","C","ncRNA_intronic","LOC111096593"]
[4,"good","chr7",5901458,5901458,"A","G","intronic","MAPKAPK2"]
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[4,"good","chr7",20982440,20982440,"A","T","intronic","RALGPS2"]
[4,"good","chr7",26805708,26805708,"C","A","intronic","DNM3"]
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[4,"good","chr7",35596182,35596182,"T","G","intronic","CATSPERE"]
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[4,"good","chr7",53901682,53901682,"T","TAACA","intronic","FHOD3"]
[4,"good","chr7",60282652,60282652,"A","G","intergenic","DSC3;CDH2",null,"dist=1825059;dist=454108"]
[4,"good","chr7",63115162,63115162,"G","GTGACAA","ncRNA_intronic","LOC111096793"]
[4,"good","chr7",71988673,71988673,"C","G","intronic","EPB41L3"]
[4,"good","chr7",77834009,77834009,"T","A","intronic","PRELID3A"]
[4,"good","chr7",79954146,79954146,"C","G","intronic","CTIF"]
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[6,"good","chr23",19875228,19875228,"A","C","intronic","UBE2E1"]
[6,"good","chr23",27679210,27679210,"A","T","intronic","COL6A5"]
[6,"good","chr23",50786822,50786822,"T","G","intronic","VEPH1"]
[6,"good","chr24",15745541,15745541,"G","A","intergenic","LOC111092110;FERMT1",null,"dist=147529;dist=3091"]
[6,"good","chr24",23448404,23448404,"G","A","intergenic","AHCY;ITCH",null,"dist=24910;dist=28215"]
[6,"good","chr24",38144223,38144223,"T","C","intergenic","LOC111092194;ZFP64",null,"dist=12236;dist=57601"]
[6,"good","chr24",46625209,46625209,"G","A","intergenic","LOC102156123;MRGBP",null,"dist=3949;dist=9371"]
[6,"good","chr25",19018526,19018526,"C","T","intergenic","PTPN18;MIR8824","NA","dist=7811;dist=4332"]
[6,"good","chr25",34580599,34580604,"ACAGGC","A","intergenic","PEBP4;EGR3",null,"dist=6513;dist=11087"]
[6,"good","chr25",42182912,42182912,"A","G","intronic","TRIP12"]
[6,"good","chr25",49453309,49453309,"G","GCTCC","intronic","HDAC4"]
[6,"good","chr26",13311720,13311720,"C","CACCTTTTCTGTGCAA","intergenic","LOC102152877;LOC111092596",null,"dist=22457;dist=34567"]
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[6,"good","chr26",27648849,27648849,"T","C","intergenic","LOC111092654;LOC607647",null,"dist=13816;dist=51672"]
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[6,"good","chr27",27911736,27911736,"G","C","intronic","PLEKHA5"]
[6,"good","chr28",2724175,2724175,"A","C","intergenic","TMEM72;LOC111093011",null,"dist=195229;dist=6000"]
[6,"good","chr28",8800689,8800689,"A","G","intronic","PDLIM1"]
[6,"good","chr28",24995860,24995860,"G","A","intronic","CCDC186"]
[6,"good","chr28",32498853,32498853,"G","A","intergenic","LOC611187;FAM24A",null,"dist=1413;dist=3293"]
[6,"good","chr29",10341974,10341974,"T","TC","intergenic","LOC111093171;CA8",null,"dist=156486;dist=336148"]
[6,"good","chr29",27362544,27362544,"T","C","intronic","MRPS28"]
[6,"good","chr29",34607441,34607441,"T","C","intergenic","LOC111093211;LOC111093241",null,"dist=41186;dist=272383"]
[6,"good","chr3",12294202,12294202,"A","G","intergenic","LOC111095121;LOC111095123",null,"dist=82798;dist=163153"]
[6,"good","chr3",23473557,23473557,"G","A","intronic","EDIL3"]
[6,"good","chr3",41878338,41878338,"A","G","intronic","IGF1R"]
[6,"good","chr3",61561877,61561877,"A","G","intronic","FAM193A"]
[6,"good","chr3",72850234,72850234,"C","A","intronic","SMIM14"]
[6,"good","chr30",1788877,1788878,"AC","A","intronic","FMN1"]
[6,"good","chr30",9633078,9633078,"C","G","exonic","STARD9","NA",null,"synonymous SNV","STARD9:XM_005638312.3:exon23:c.C12279G:p.S4093S"]
[6,"good","chr30",34147203,34147203,"T","C","intergenic","LOC102154051;UACA",null,"dist=3983;dist=228869"]
[6,"good","chr30",37158370,37158370,"A","T","intergenic","TBC1D21;LOC111093351",null,"dist=11063;dist=17039"]
[6,"good","chr31",18041678,18041678,"A","G","intergenic","NCAM2;LOC111093551",null,"dist=606824;dist=455424"]
[6,"good","chr31",36860119,36860119,"G","GCACC","intronic","SLC37A1"]
[6,"good","chr32",4036149,4036149,"A","C","intergenic","GK2;ANTXR2",null,"dist=303176;dist=107258"]
[6,"good","chr32",24445918,24445918,"T","TGATGTG","intergenic","BDH2;CENPE",null,"dist=3534;dist=1455"]
[6,"good","chr32",38573785,38573785,"C","G","intergenic","LOC111093690;LOC111093631",null,"dist=146669;dist=14284"]
[6,"good","chr33",12949935,12949935,"C","G","intronic","BBX"]
[6,"good","chr33",21245842,21245842,"A","T","ncRNA_intronic","LOC111093712"]
[6,"good","chr34",5754501,5754501,"T","A","intergenic","LOC111093954;MTRR",null,"dist=210730;dist=314071"]
[6,"good","chr34",26232325,26232327,"GTT","G","intergenic","LOC102153750;LOC102153795",null,"dist=28038;dist=5398"]
[6,"good","chr34",30443063,30443063,"C","T","ncRNA_intronic","LOC111093823"]
[6,"good","chr35",10454145,10454145,"C","T","upstream","LOC478720",null,"dist=356"]
[6,"good","chr35",16816689,16816689,"G","A","intergenic","KIF13A;NHLRC1",null,"dist=68189;dist=103998"]
[6,"good","chr36",7717049,7717049,"C","T","exonic","IFIH1","NA",null,"stopgain","IFIH1:XM_545493.5:exon2:c.G533A:p.W178X"]
[6,"good","chr37",392134,392134,"T","A","intergenic","LOC111094407;LOC478838",null,"dist=43908;dist=34232"]
[6,"good","chr37",10959346,10959346,"A","T","intergenic","CDK15;LOC106558328",null,"dist=29528;dist=3813"]
[6,"good","chr37",30709396,30709396,"A","T","intronic","DLGAP2"]
[6,"good","chr38",7506566,7506566,"C","CCCTGGGAGGAGCCTGCTT","intergenic","LOC111094559;LOC111094586",null,"dist=280932;dist=354765"]
[6,"good","chr4",243954,243954,"A","G","intergenic","LOC606894;ZNF25",null,"dist=2020;dist=17962"]
[6,"good","chr4",8033937,8033997,"CTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTTCTCCTTCTCCT","C","intergenic","TSNAX;EGLN1",null,"dist=65923;dist=19489"]
[6,"good","chr4",30459743,30459743,"G","A","intergenic","LOC102157292;LOC102157353",null,"dist=567874;dist=23171"]
[6,"good","chr4",48098633,48098633,"G","A","intergenic","LOC102155509;LOC106558726",null,"dist=55537;dist=204473"]
[6,"good","chr4",56458498,56458498,"G","T","intergenic","GRIA1;LOC111095718",null,"dist=355115;dist=95475"]
[6,"good","chr4",79404660,79404660,"T","A","intergenic","CDH9;LOC111095660",null,"dist=120146;dist=256144"]
[6,"good","chr4",88095911,88095911,"G","A","intergenic","LOC102151393;LOC102151436",null,"dist=400185;dist=38476"]
[6,"good","chr5",19742625,19742625,"A","G","intronic","DRD2"]
[6,"good","chr5",34445161,34445161,"A","G","intronic","GAS7"]
[6,"good","chr5",42565031,42565031,"A","G","intergenic","USP22;DHRS7B",null,"dist=45291;dist=37996"]
[6,"good","chr5",64980331,64980337,"GGAATGA","G","intergenic","LOC111095999;BANP",null,"dist=71407;dist=171526"]
[6,"good","chr5",68023370,68023370,"C","G","intronic","ATP2C2"]
[6,"good","chr6",715906,715906,"T","C","intronic","VKORC1L1"]
[6,"good","chr6",17322089,17322089,"C","T","ncRNA_intronic","LOC111096249"]
[6,"good","chr6",24519804,24519804,"C","CATGCCCTGGGCTGAAG","intronic","REXO5"]
[6,"good","chr6",46255051,46255051,"G","A","intergenic","LOC111096509;LOC612019",null,"dist=47828;dist=699292"]
[6,"good","chr6",48953841,48953841,"A","G","ncRNA_intronic","LOC102153396"]
[6,"good","chr6",74317253,74317253,"C","T","intronic","NEGR1"]
[6,"good","chr7",14985798,14985798,"G","GGACAA","intronic","CACNA1E"]
[6,"good","chr7",23327985,23327985,"C","T","intronic","RFWD2"]
[6,"good","chr7",34687670,34687670,"A","T","intronic","AKT3"]
[6,"good","chr7",47946245,47946245,"A","T","intronic","RIT2"]
[6,"good","chr7",72156882,72156885,"TTGG","T","intergenic","LOC111096814;LOC111096815",null,"dist=3684;dist=69584"]
[6,"good","chr7",80621036,80621038,"CTT","C","intergenic","SKA1;LOC111096923",null,"dist=59304;dist=31339"]
[6,"good","chr8",15532406,15532406,"T","A","intronic","SLC25A21"]
[6,"good","chr8",22941810,22941810,"A","T","intergenic","LOC111097211;LOC111097018",null,"dist=18121;dist=87858"]
[6,"good","chr8",40276714,40276714,"T","A","intergenic","LOC111097078;LOC111097079",null,"dist=74213;dist=13203"]
[6,"good","chr8",62904432,62904432,"C","A","intergenic","PRIMA1;LOC111097243",null,"dist=1195;dist=54506"]
[6,"good","chr8",71548211,71548211,"G","A","intergenic","PPP1R13B;LOC106559138",null,"dist=29293;dist=40041"]
[6,"good","chr9",12250608,12250608,"C","T","upstream","MILR1",null,"dist=477"]
[6,"good","chr9",19502133,19502133,"C","T","intronic","C9H17orf105;MPP3"]
[6,"good","chr9",40921326,40921326,"G","A","intergenic","ATAD5;CRLF3",null,"dist=3350;dist=12072"]
[6,"good","chr9",57434405,57434405,"G","GAGAC","intergenic","PBX3;MAPKAP1",null,"dist=4585;dist=12710"]
[6,"good","chrX",5921583,5921583,"A","AT","ncRNA_intronic","LOC102153595"]
[6,"good","chrX",52602065,52602065,"G","A","intronic","OPHN1"]
[6,"good","chrX",71747147,71747147,"G","A","intergenic","MIRLET7J;LOC111094894",null,"dist=178501;dist=1246111"]
[6,"good","chrX",111330626,111330626,"C","A","intergenic","LOC612108;LOC492181",null,"dist=80422;dist=326514"]
[9,"good","chr10",24562445,24562445,"A","C","intronic","MKL1"]
[9,"good","chr10",34058399,34058399,"A","G","intergenic","TXNRD1;SOWAHC",null,"dist=36850;dist=184272"]
[9,"good","chr10",63923653,63923653,"A","T","intergenic","LOC111097781;LOC102153332",null,"dist=2839;dist=6257"]
[9,"good","chr11",4050914,4050914,"T","G","ncRNA_intronic","LOC111097984"]
[9,"good","chr11",35599783,35599783,"G","GATGTGGGA","intergenic","TTC39B;SNAPC3",null,"dist=41983;dist=104378"]
[9,"good","chr11",40597197,40597197,"G","A","intronic","HACD4"]
[9,"good","chr12",1620999,1621000,"TC","T","intergenic","NOTCH4;LOC481727",null,"dist=12278;dist=11778"]
[9,"good","chr12",12194324,12194324,"A","G","downstream","LOC111098265",null,"dist=303"]
[9,"good","chr12",38864190,38864190,"G","C","intronic","MEI4"]
[9,"good","chr13",1238283,1238283,"A","G","intronic","VPS13B"]
[9,"good","chr13",5229139,5229139,"A","G","ncRNA_intronic","LOC111098508"]
[9,"good","chr13",34350288,34350288,"C","T","intergenic","LOC102155574;LOC111098570",null,"dist=95300;dist=21961"]
[9,"good","chr13",43327106,43327106,"C","G","intronic","GABRB1"]
[9,"good","chr14",3564199,3564199,"C","T","intronic","EXOC4"]
[9,"good","chr14",38562696,38562696,"A","T","ncRNA_intronic","LOC100682919"]
[9,"good","chr14",48278785,48278785,"T","TGCG","intronic","ELMO1"]
[9,"good","chr15",14687788,14687788,"A","C","intronic","GPBP1L1"]
[9,"good","chr15",26965968,26965968,"C","T","intergenic","ALX1;MIR8838",null,"dist=107182;dist=20580"]
[9,"good","chr15",58213044,58213044,"C","A","intronic","FSTL5"]
[9,"good","chr16",4925568,4925569,"TG","T","intergenic","LOC111090213;LOC111090154",null,"dist=107330;dist=172871"]
[9,"good","chr16",33097122,33097122,"C","T","intergenic","LOC111090300;WRN",null,"dist=10804;dist=67540"]
[9,"good","chr16",54945837,54945837,"C","A","intergenic","LOC111090192;CSMD1",null,"dist=23825;dist=197153"]
[9,"good","chr17",5257778,5257778,"A","C","upstream","LOC111090472",null,"dist=107"]
[9,"good","chr17",33569396,33569396,"A","G","ncRNA_exonic","LOC102151259"]
[9,"good","chr17",45660564,45660564,"T","C","intergenic","LOC102153416;LRRTM4",null,"dist=748314;dist=430576"]
[9,"good","chr18",14180702,14180702,"A","C","intronic","NAMPT"]
[9,"good","chr18",37122982,37122982,"T","TGTTGTG","intronic","PATL1"]
[9,"good","chr18",46723366,46723366,"G","A","intronic","KCNQ1"]
[9,"good","chr19",19955192,19955228,"ATTTATTCATTTATTTATTTATTATTTATTTATTTAT","A","intergenic","LOC100856294;LOC111091126",null,"dist=6999;dist=37941"]
[9,"good","chr19",22036140,22036140,"A","C","intergenic","LOC111091051;LOC111091130",null,"dist=500727;dist=8465"]
[9,"good","chr2",4501548,4501568,"CTTTCTTTCTTTCTTTCTTTT","C","intronic","LOC607646"]
[9,"good","chr2",19072225,19072225,"A","G","intergenic","SLC39A12;MRC1",null,"dist=7326;dist=18355"]
[9,"good","chr2",39092126,39092126,"T","C","intronic","KCTD16"]
[9,"good","chr2",70829944,70829944,"T","C","intergenic","LOC111094698;LOC111094699",null,"dist=418876;dist=189685"]
[9,"good","chr2",74463998,74463998,"C","T","intergenic","TMEM57;RHCE",null,"dist=5872;dist=2930"]
[9,"good","chr20",20706042,20706042,"A","C","intronic","FOXP1"]
[9,"good","chr20",45553505,45553505,"T","TG","intronic","MYO9B"]
[9,"good","chr20",53722196,53722196,"G","C","upstream","CRB3;SLC25A23",null,"dist=645"]
[9,"good","chr21",4149665,4149665,"C","T","ncRNA_intronic","LOC111091515"]
[9,"good","chr21",27835194,27835219,"AAAGCAGCTTCTGAGCTCTCCCTGGG","A","intergenic","LOC610271;COR51X2",null,"dist=28536;dist=3778"]
[9,"good","chr22",9472538,9472538,"T","A","intronic","LOC102153124"]
[9,"good","chr22",20380386,20380386,"C","T","intergenic","LOC111091756;LOC106557543",null,"dist=254196;dist=165584"]
[9,"good","chr22",48536443,48536449,"GCCTGCT","G","intronic","FARP1"]
[9,"good","chr23",1684192,1684192,"T","C","intronic","NINL"]
[9,"good","chr23",28721518,28721518,"C","T","intronic","CPNE4"]
[9,"good","chr24",12345123,12345123,"C","A","ncRNA_intronic","LOC111092101"]
[9,"good","chr24",23138051,23138051,"T","C","intergenic","LOC111092076;RALY",null,"dist=19399;dist=35158"]
[9,"good","chr24",46316483,46316483,"T","G","exonic","LAMA5","DELETERIOUS (*WARNING! Low confidence)",null,"nonsynonymous SNV","LAMA5:XM_005635367.1:exon41:c.A5474C:p.H1825P"]
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[9,"good","chr25",43754386,43754386,"A","T","exonic","LOC102153399","-",null,"nonsynonymous SNV","LOC102153399:XM_005635895.1:exon2:c.T227A:p.L76Q"]
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[9,"good","chr26",24765319,24765319,"T","C","intergenic","DEPDC5;C26H22orf24",null,"dist=10591;dist=11402"]
[9,"good","chr27",6049676,6049676,"G","T","intergenic","COR8S9;LOC100686490",null,"dist=16478;dist=9734"]
[9,"good","chr27",17517518,17517541,"CGGGCCGGGACCGCACGACCTCGG","C","intergenic","SINHCAF;CAPRIN2",null,"dist=60890;dist=1425"]
[9,"good","chr28",203705,203705,"G","A","intronic","FRMPD2"]
[9,"good","chr28",26697634,26697634,"T","A","intergenic","ATRNL1;GFRA1",null,"dist=94332;dist=9958"]
[9,"good","chr28",39007214,39007214,"G","C","intergenic","LOC102152832;LOC111093021",null,"dist=238068;dist=67646"]
[9,"good","chr29",23690739,23690739,"T","C","intronic","HNF4G"]
[9,"good","chr29",35210619,35210619,"C","T","intergenic","LOC111093093;LOC111093097","DELETERIOUS (*WARNING! Low confidence)","dist=68788;dist=68246"]
[9,"good","chr3",30300463,30300463,"A","G","intronic","SV2C"]
[9,"good","chr3",33189808,33189808,"A","AT","intronic","GABRG3"]
[9,"good","chr3",69783133,69783133,"G","T","intergenic","ZBTB49;NSG1",null,"dist=26679;dist=22513"]
[9,"good","chr3",82623064,82623064,"C","CT","intergenic","LOC111095303;LOC111095399",null,"dist=340450;dist=131344"]
[9,"good","chr32",23310008,23310008,"T","C","intergenic","LOC111093686;BANK1",null,"dist=102997;dist=12646"]
[9,"good","chr33",14099672,14099672,"A","G","intergenic","TRAT1;GUCA1C",null,"dist=31363;dist=6659"]
[9,"good","chr33",18570726,18570726,"T","C","intergenic","MIR568;LOC487987",null,"dist=63763;dist=290098"]
[9,"good","chr34",20477668,20477668,"G","C","intergenic","LOC102156428;LPP",null,"dist=50924;dist=60912"]
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[9,"good","chr35",15662172,15662172,"A","G","intronic","ATXN1"]
[9,"good","chr36",23697992,23697992,"G","A","intergenic","CWC22;LOC111094258",null,"dist=282933;dist=269126"]
[9,"good","chr36",28776505,28776505,"G","A","intergenic","ZC3H15;ITGAV",null,"dist=32621;dist=38710"]
[9,"good","chr38",1456937,1456937,"G","A","intronic","NFASC"]
[9,"good","chr38",14655171,14655171,"C","G","ncRNA_intronic","LOC102156579"]
[9,"good","chr4",17100663,17100663,"C","G","intergenic","LOC102152895;CTNNA3",null,"dist=309908;dist=263458"]
[9,"good","chr4",54588706,54588706,"A","G","intergenic","SGCD;LOC111095573",null,"dist=410478;dist=185428"]
[9,"good","chr4",66911038,66911040,"TTG","T","ncRNA_exonic","LOC111095620"]
[9,"good","chr5",4720490,4720490,"T","A","intronic","APLP2"]
[9,"good","chr5",16242916,16242916,"A","G","intronic","CEP164"]
[9,"good","chr5",41798222,41798222,"T","A","upstream","RAI1",null,"dist=868"]
[9,"good","chr5",67878376,67878376,"T","A","intronic","COTL1"]
[9,"good","chr5",85696436,85696436,"A","G","intergenic","LOC106558851;LOC111096134",null,"dist=346864;dist=128712"]
[9,"good","chr6",21594281,21594281,"A","G","ncRNA_intronic","LOC111096274"]
[9,"good","chr6",33246440,33246482,"GGAGAGAGAGAGAGAGGCAGAGACACAGGCAGAGGGAGAAACA","G","intergenic","C6H16orf72;USP7",null,"dist=95219;dist=30847"]
[9,"good","chr6",67121351,67121354,"GAAA","G","intergenic","LOC111096529;LOC111096438",null,"dist=50358;dist=16599"]
[9,"good","chr6",71682018,71682018,"C","T","intronic","CRYZ"]
[9,"good","chr7",33825591,33825591,"G","GGGATGGAGCCCCATGAT","intronic","PLD5"]
[9,"good","chr7",60841938,60841938,"G","A","intronic","CDH2"]
[9,"good","chr7",74735834,74735834,"A","G","intergenic","PTPRM;RAB12",null,"dist=138336;dist=16863"]
[9,"good","chr8",23083033,23083033,"T","A","intergenic","LOC111097018;LOC111097019",null,"dist=12693;dist=12052"]
[9,"good","chr8",27568706,27568706,"C","A","intergenic","TMX1;LOC111097216",null,"dist=12648;dist=55886"]
[9,"good","chr8",63324398,63324398,"A","G","exonic","LOC490838","TOLERATED",null,"nonsynonymous SNV","LOC490838:XM_005623764.3:exon5:c.T1094C:p.V365A"]
[9,"good","chr9",3130699,3130699,"G","GGCCCCTCAGGGGCCCGGGTGCACCACCCATGTGGACCCTGCTCCCTTCCTCCGCTTCCCCCCACCCGCGTGGAAAGGCTGGGGAGAGACTTCCTCTGCTCAGTCCTGGGCGGCCGCTGGGCTCCGGCCC","intergenic","TNRC6C;LOC111097282",null,"dist=8035;dist=35639"]
[9,"good","chr9",12769001,12769001,"T","G","ncRNA_intronic","LOC111097322"]
[9,"good","chr9",44747972,44747972,"G","GAGAA","intronic","ABR"]
[9,"good","chr9",48902736,48902736,"G","C","intergenic","EGFL7;NOTCH1",null,"dist=12734;dist=73236"]
[9,"good","chrX",43417041,43417041,"C","A","intronic","SHROOM4"]
[9,"good","chrX",53263311,53263311,"T","C","intergenic","PSMA4;EFNB1",null,"dist=16954;dist=29096"]
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