##Supplemental Data 2: The haplotypes based on the cp genome.
 
DnaSP  Ver. 6.12.03                        09 - Jul - 2024  10:08:30 AM
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 Haplotype/DNA Sequences Data
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Input Data File: Z:\...\alba_rubra_aligned.nex
 Number of sequences: 45    Number of sequences used: 45
 Selected region: 1-160039   Number of sites: 160039
 Total number of sites (excluding sites with gaps / missing data): 158608

 Sites with alignment gaps:  not considered
 Number of variable sites: 441

 =========== Haplotype Distribution ===========
 Number of haplotypes, h: 13
 Haplotype diversity, Hd: 0.8414

    Hap_1: 10  [1-10]
    Hap_2: 1  [11]
    Hap_3: 1  [12]
    Hap_4: 9  [13 15-17 22-26]
    Hap_5: 1  [14]
    Hap_6: 12  [18 21 32-38 40 42 45]
    Hap_7: 1  [19]
    Hap_8: 1  [20]
    Hap_9: 5  [27-31]
    Hap_10: 1  [39]
    Hap_11: 1  [41]
    Hap_12: 1  [43]
    Hap_13: 1  [44]

    Hap_1: 10  [014 046 049 051 052 0100 #170 26 37 41]
    Hap_2: 1  [31]
    Hap_3: 1  [055]
    Hap_4: 9  [025 034 175_1 037 027 036 041 050 056]
    Hap_5: 1  [043]
    Hap_6: 12  [180_3 182_1 021 024 031 048 057 058 059 133_14 029 182_4]
    Hap_7: 1  [Menard_1]
    Hap_8: 1  [172_14]
    Hap_9: 5  [019 044 176_3 36 40]
    Hap_10: 1  [061]
    Hap_11: 1  [28]
    Hap_12: 1  [171_1]
    Hap_13: 1  [171_4]

Note: The haplotypes above contain the specimen_voucher. See Table S4 for linking with the GenBank Accession #.