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["Table S20 - Gene-Protein-Reaction (GPR) rules for selected reactions present in aerobic (P3) and anaerobic (P1 and P2) conversion of benzoate to acetyl-CoA pathways."]
["Pathway Names","Pathway IDs","Module Name","Module","Reaction","Protein","Genes","Definition","Parsed Definition","Parsed Definitions Merged by Module","Parsed Definitions Merged by Module and Reaction"]
["Benzoate degradation","00362|00622|01100|01120|01220","Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA","M00569","R00228","1.2.1.10","K18366","K18366 or  K04073","[K18366,K04073]","[K18366,K04073]","[K04073,K18366]"]
["Glyoxylate and dicarboxylate metabolism","00630|01100|01120|01200","Ethylmalonyl pathway","M00373","R00238","2.3.1.9","K00626","K00626","[K00626]","[K00626]","[K00626]"]
["Benzoate degradation","00362|00622|01100|01120|01220","Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA","M00569","R00750","4.1.3.39","K18365","K18365 or  K01666","[K18365,K01666]","[K18365,K01666]","[K01666,K18365]"]
["Benzoate degradation","00362|00622|01100|01120|01220","Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol","M00551","R00813","1.3.1.25","K05783","K05783","[K05783]","[K05783]","[K05783]"]
["Benzoate degradation","00362|00622|01100|01120|01220","Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA","M00569","R00816","1.13.11.2","K07104","K00446 or  K07104","[K00446,K07104]","[K00446,K07104]","[K00446,K07104]"]
["Benzoate degradation",null,"Benzoate degradation, benzoate => benzoyl-CoA",null,"R01422","6.2.1.25","K04105","K04105 or K04110",null,null,"[K04105,K04110]"]
["Phenylalanine metabolism","00360|01100|01120","Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA","M00878","R01976","1.1.1.157","K00074","K00074","[K00074]","[K00074]","[K00074]"]
["Benzoate degradation","00362|01100|01120|01220","Benzoyl-CoA degradation, benzoyl-CoA => 3-hydroxypimeloyl-CoA","M00541","R02451","1.3.7.8","K04112 and K04113 and K04114 and K04115,K04114","K04112 and K04113 and K04114 and K04115 or  K19515 and K19516","[[[K04112,K04113,K04114,K04115]],[[K19515,K19516]]]","[[[K04112,K04113,K04114,K04115]],[[K19515,K19516]]]","[[[K04112,K04113,K04114,K04115]],[[K19515,K19516]]]"]
["Lysine degradation","00310|01100","Lysine degradation, lysine => saccharopine => acetoacetyl-CoA","M00032","R02488","1.3.8.6","K00252","K00252","[K00252]","[K00252]","[K00252]"]
["Benzoate degradation","00362|00622|01100|01120|01220","Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA","M00545","R02601","4.2.1.80","K02554","K02554","[K02554]","[K02554]","[K02554]"]
["Benzoate degradation","00362|00622|01100|01120|01220","Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA","M00569","R02604","3.7.1.9","K10216","K01617 or  K10216","[K01617,K10216]","[K01617,K10216]","[K01617,K10216]"]
["Carbon fixation pathways in prokaryotes","00720|01100|01120|01200","Dicarboxylate-hydroxybutyrate cycle","M00374","R03026","4.2.1.17","K15016","K15016","[K15016]","[K15016]","[K15016]"]
["Benzoate degradation",{"$nulls":3},"R03028","7.2.4.5","K01615","K01615 or K20509 or K23351 or K23352",null,null,"[K01615,K20509,K23351,K23352]"]
["Fatty acid degradation","00071|01100|01212","beta-Oxidation","M00087","R05305","1.1.1.35","K01782","K00022 or  K07516 or  K01825 or  K01782 or  K07514 or  K07515 or  K10527","[K00022,K07516,K01825,K01782,K07514,K07515,K10527]","[K00022,K07516,K01825,K01782,K07514,K07515,K10527]","[K00022,K07516,K01825,K01782,K07514,K07515,K10527]"]
["Benzoate degradation",{"$nulls":3},"R05579","1.3.99.32","K16173","K16173",null,null,"[K16173]"]
["Benzoate degradation","00362|01100|01120|01220","Benzoyl-CoA degradation, benzoyl-CoA => 3-hydroxypimeloyl-CoA","M00541","R05581","1.1.1.368","K07538","K07538","[K07538]","[K07538]","[K07538]"]
["Fatty acid degradation","00071|01100|01212","beta-Oxidation","M00087","R05586","2.3.1.16","K00632","K00632 or  K07508 or  K07509 or  K07513","[K00632,K07508,K07509,K07513]","[K00632,K07508,K07509,K07513]","[K00632,K07508,K07509,K07513]"]
["Benzoate degradation","00362|01100|01120|01220","Benzoyl-CoA degradation, benzoyl-CoA => 3-hydroxypimeloyl-CoA","M00541","R05594","3.7.1.21","K07539","K07539","[K07539]","[K07539]","[K07539]"]
["Benzoate degradation","00362|01100|01120|01220","Benzoyl-CoA degradation, benzoyl-CoA => 3-hydroxypimeloyl-CoA","M00541","R05597","4.2.1.100","K07537","K07537","[K07537]","[K07537]","[K07537]"]
["Benzoate degradation","00362|00622|01100|01120|01220","Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol","M00551","R05621","1.14.12.10","K05550","K05549 and K05550 and K05784","[[K05549,K05550,K05784]]","[[K05549,K05550,K05784]]","[[K05549,K05550,K05784]]"]