{"text_format":"3","workbook":"xlsx","n_sheets":7,"sheets":["L","S","Tyrosine_and_Tryptophan","Enrichment_analysis","Venn","L(High-quality)","S(High-quality)"],"not_rendered":{"defined_names":8},"read":"whole","date_system":"1900"}

{"sheet":"L","index":0,"n_rows":2221,"n_cols":34,"rows_kept":2221}
["#","Chromosome","Region","Type","Reference","Allele","Zygosity","Count","Coverage","Frequency","Probability","Forward read count","Reverse read count","Forward/reverse balance","Average quality","Read count","Read coverage","# unique start positions","# unique end positions","BaseQRankSum","Read position test probability","Read direction test probability","Hyper-allelic","Genotype","Homopolymer","Homopolymer length","QUAL","Coding region change","Amino acid change","GCF_000002335.3_Tcas5.2_genomic_Gene","GeneID","description (GCF_000002335.3_Tcas5.2_genomic_Gene)","NCBI GENE description","NCBI GENE symbol"]
[1,"NC_007416.3",110744,"SNV","C","T","Heterozygous",8,20,40,1,7,1,0.12,38.5,8,23,5,7,1,0.18,0.16,"no","C/T","No",1,58.98,"XP_968029.3:c.[2479C>T]; XP_015838868.1:c.[2506C>T]; XP_008198519.1:c.[2050C>T]; XP_015839410.1:c.[2452C>T]","XP_968029.3:p.[Pro827Ser]; XP_015838868.1:p.[Pro836Ser]; XP_008198519.1:p.[Pro684Ser]; XP_015839410.1:p.[Pro818Ser]","LOC656402",656402,null,"656402 [Gene Symbol: LOC656402] [Locus Tag: TcasGA2_TC004671] [Chromosome: LGX] [Map Location: ] [Description: glycogenin-2] [Gene Type: protein-coding]","LOC656402; TcasGA2_TC004671"]
[2,"NC_007416.3",312110,"SNV","A","G","Homozygous",26,26,100,1,14,18,0.44,37.69,32,32,15,21,null,1,1,"no","G/G","No",1,98.15,"XP_015835038.1:c.2303T>C","XP_015835038.1:p.Phe768Ser","LOC657847",657847,null,"657847 [Gene Symbol: LOC657847] [Locus Tag: TcasGA2_TC034516] [Chromosome: LGX] [Map Location: ] [Description: latrophilin Cirl] [Gene Type: protein-coding]","TcasGA2_TC034516; LOC657847"]
[3,"NC_007416.3",495934,"SNV","C","T","Homozygous",21,21,100,1,13,8,0.38,38.67,21,21,12,17,null,1,1,"no","T/T","No",1,84.7,"XP_969675.1:c.[223G>A]; XP_008200361.1:c.[223G>A]","XP_969675.1:p.[Val75Met]; XP_008200361.1:p.[Val75Met]","LOC658173",658173,null,"658173 [Gene Symbol: LOC658173] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase] [Gene Type: protein-coding]","LOC658173"]
[4,"NC_007416.3","870326^870327","Insertion","-","AAACCC","Homozygous",20,20,100,1,14,11,0.44,35.99,25,25,14,17,null,1,1,"no","AAACCC/AAACCC","No",1,200,"XP_001812159.2:c.468_469insAAACCC","XP_001812159.2:p.Lys159_Asp160insProLys","LOC100142046",100142046,null,"100142046 [Gene Symbol: LOC100142046] [Locus Tag: TcasGA2_TC004652] [Chromosome: LGX] [Map Location: ] [Description: pollen-specific leucine-rich repeat extensin-like protein 1] [Gene Type: protein-coding]","TcasGA2_TC004652; LOC100142046"]
[5,"NC_007416.3",879126,"SNV","G","A","Homozygous",26,26,100,1,10,16,0.38,37.81,26,26,17,17,null,1,1,"no","A/A","No",1,99.74,"XP_008190742.1:c.[1374G>A]; XP_008190743.1:c.[1374G>A]; XP_008190744.1:c.[1374G>A]","XP_008190742.1:p.[Met458Ile]; XP_008190743.1:p.[Met458Ile]; XP_008190744.1:p.[Met458Ile]","LOC103312277",103312277,null,"103312277 [Gene Symbol: LOC103312277] [Locus Tag: TcasGA2_TC004654] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103312277] [Gene Type: protein-coding]","TcasGA2_TC004654; P54; LOC103312277"]
[6,"NC_007416.3",903965,"SNV","A","G","Homozygous",21,21,100,1,13,9,0.41,37.43,22,22,8,16,null,1,1,"no","G/G","No",1,83.1,"XP_008190734.1:c.[12T>C]; XP_008190735.1:c.[12T>C]; XP_008190729.1:c.[2T>C]; XP_008190728.1:c.[12T>C]; XP_008190730.1:c.[12T>C]; XP_015834686.1:c.[86+4465T>C]; XP_008190731.1:c.[12T>C]; XP_008190739.1:c.[86+4465T>C]; XP_008190733.1:c.[86+4465T>C]","XP_008190729.1:p.[Met1?]","LOC658988",658988,null,"658988 [Gene Symbol: LOC658988] [Locus Tag: TcasGA2_TC004710] [Chromosome: LGX] [Map Location: ] [Description: aryl hydrocarbon receptor nuclear translocator homolog] [Gene Type: protein-coding]","TcasGA2_TC004710; LOC658988"]
[7,"NC_007416.3",913712,"SNV","T","C","Homozygous",27,27,100,1,17,10,0.37,36.74,27,27,11,20,null,1,1,"no","C/C","No",1,101.18,"XP_015835886.1:c.[4366A>G]; XP_015835879.1:c.[4531A>G]; XP_015835888.1:c.[4351A>G]; XP_015835876.1:c.[4561A>G]; XP_015835885.1:c.[4576A>G]; XP_015835870.1:c.[4576A>G]; XP_015835893.1:c.[4240A>G]; XP_015835895.1:c.[3829A>G]; XP_015835892.1:c.[4270A>G]; XP_015835873.1:c.[4576A>G]; XP_015835881.1:c.[4510A>G]; XP_015835890.1:c.[4300A>G]; XP_015835866.1:c.[4576A>G]; XP_015835883.1:c.[4480A>G]","XP_015835886.1:p.[Ile1456Val]; XP_015835879.1:p.[Ile1511Val]; XP_015835888.1:p.[Ile1451Val]; XP_015835876.1:p.[Ile1521Val]; XP_015835885.1:p.[Ile1526Val]; XP_015835870.1:p.[Ile1526Val]; XP_015835893.1:p.[Ile1414Val]; XP_015835895.1:p.[Ile1277Val]; XP_015835892.1:p.[Ile1424Val]; XP_015835873.1:p.[Ile1526Val]; XP_015835881.1:p.[Ile1504Val]; XP_015835890.1:p.[Ile1434Val]; XP_015835866.1:p.[Ile1526Val]; XP_015835883.1:p.[Ile1494Val]","LOC100141763",100141763,null,"100141763 [Gene Symbol: LOC100141763] [Locus Tag: TcasGA2_TC004706] [Chromosome: LGX] [Map Location: LGX|LGX] [Description: agrin] [Gene Type: protein-coding]","LOC100141763; TcasGA2_TC004706"]
[8,"NC_007416.3",1026883,"SNV","G","A","Homozygous",20,20,100,1,15,5,0.25,37.95,20,20,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_969958.1:c.5G>A","XP_969958.1:p.Arg2Lys","LOC658481",658481,null,"658481 [Gene Symbol: LOC658481] [Locus Tag: TcasGA2_TC004657] [Chromosome: LGX] [Map Location: ] [Description: inactive pancreatic lipase-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC004657; LOC658481"]
[9,"NC_007416.3",1026894,"SNV","T","C","Homozygous",22,22,100,1,17,5,0.23,37.5,22,22,12,14,null,1,1,"no","C/C","No",1,86.13,"XP_969958.1:c.16T>C","XP_969958.1:p.Phe6Leu","LOC658481",658481,null,"658481 [Gene Symbol: LOC658481] [Locus Tag: TcasGA2_TC004657] [Chromosome: LGX] [Map Location: ] [Description: inactive pancreatic lipase-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC004657; LOC658481"]
[10,"NC_007416.3",1030420,"SNV","C","T","Homozygous",20,20,100,1,11,11,0.5,39.1,22,22,10,15,null,1,1,"no","T/T","No",1,81.69,"XP_008190720.1:c.[286G>A]; XP_015835927.1:c.[286G>A]","XP_008190720.1:p.[Val96Ile]; XP_015835927.1:p.[Val96Ile]","LOC103312271",103312271,null,"103312271 [Gene Symbol: LOC103312271] [Locus Tag: TcasGA2_TC004705] [Chromosome: LGX] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312271; TcasGA2_TC004705"]
[11,"NC_007416.3",1244148,"SNV","C","T","Homozygous",20,20,100,1,9,16,0.36,36.6,25,25,14,13,null,1,1,"no","T/T","No",1,81.7,"XP_001813427.1:c.[1264G>A]; XP_015835145.1:c.[1264G>A]; XP_008200248.1:c.[1264G>A]","XP_001813427.1:p.[Glu422Lys]; XP_015835145.1:p.[Glu422Lys]; XP_008200248.1:p.[Glu422Lys]","LOC100142250",100142250,null,"100142250 [Gene Symbol: LOC100142250] [Locus Tag: TcasGA2_TC001632] [Chromosome: LGX] [Map Location: ] [Description: pro-interleukin-16] [Gene Type: protein-coding]","LOC100142250; TcasGA2_TC001632"]
[12,"NC_007416.3",1277016,"SNV","G","C","Homozygous",20,20,100,1,13,14,0.48,36.45,27,27,11,12,null,1,1,"no","C/C","No",1,80.11,"XP_971720.1:c.535C>G","XP_971720.1:p.Arg179Gly","LOC660392",660392,null,"660392 [Gene Symbol: LOC660392] [Locus Tag: TcasGA2_TC001630] [Chromosome: LGX] [Map Location: ] [Description: very-long-chain 3-oxoacyl-CoA reductase] [Gene Type: protein-coding]","LOC660392; TcasGA2_TC001630"]
[13,"NC_007416.3",1317658,"SNV","T","G","Homozygous",23,23,100,1,9,18,0.33,36.3,27,27,15,14,null,1,1,"no","G/G","No",1,89.12,"XP_008200242.1:c.[152-605T>G]; XP_015835407.1:c.[151A>C]","XP_015835407.1:p.Ile51Leu","LOC659752, LOC103314874","659752 , 103314874",null,"659752 [Gene Symbol: LOC659752] [Locus Tag: TcasGA2_TC001611] [Chromosome: LGX] [Map Location: ] [Description: SEC23-interacting protein] [Gene Type: protein-coding] || 103314874 [Gene Symbol: LOC103314874] [Locus Tag: TcasGA2_TC001625] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314874] [Gene Type: protein-coding]","TcasGA2_TC001611; LOC659752 || LOC103314874; TcasGA2_TC001625"]
[14,"NC_007416.3",1318677,"SNV","T","C","Homozygous",20,20,100,1,16,8,0.33,36.25,24,24,8,16,null,1,1,"no","C/C","No",1,80.11,"XP_008200242.1:c.566T>C","XP_008200242.1:p.Leu189Pro","LOC659752",659752,null,"659752 [Gene Symbol: LOC659752] [Locus Tag: TcasGA2_TC001611] [Chromosome: LGX] [Map Location: ] [Description: SEC23-interacting protein] [Gene Type: protein-coding]","TcasGA2_TC001611; LOC659752"]
[15,"NC_007416.3",1657211,"SNV","T","C","Homozygous",25,25,100,1,15,14,0.48,37,29,29,13,19,null,1,1,"no","C/C","No",1,95.15,"XP_008200041.1:c.4717T>C","XP_008200041.1:p.Phe1573Leu","LOC656639",656639,null,"656639 [Gene Symbol: LOC656639] [Locus Tag: TcasGA2_TC004144] [Chromosome: LGX] [Map Location: ] [Description: plexin-B] [Gene Type: protein-coding]","LOC656639; TcasGA2_TC004144; PlexB"]
[16,"NC_007416.3",1730301,"SNV","C","A","Homozygous",23,23,100,1,15,12,0.44,37.87,27,27,13,17,null,1,1,"no","A/A","No",1,90.72,"XP_008200046.1:c.[9568C>A]; XP_008200047.1:c.[9568C>A]; XP_008200049.1:c.[9568C>A]; XP_008200048.1:c.[9568C>A]","XP_008200046.1:p.[Leu3190Ile]; XP_008200047.1:p.[Leu3190Ile]; XP_008200049.1:p.[Leu3190Ile]; XP_008200048.1:p.[Leu3190Ile]","LOC657452",657452,null,"657452 [Gene Symbol: LOC657452] [Locus Tag: TcasGA2_TC004152] [Chromosome: LGX] [Map Location: ] [Description: E3 ubiquitin-protein ligase HUWE1] [Gene Type: protein-coding]","HUWE1; LOC657452; TcasGA2_TC004152"]
[17,"NC_007416.3",1739695,"SNV","G","A","Homozygous",20,20,100,1,13,7,0.35,37.4,20,20,9,15,null,1,1,"no","A/A","No",1,81.69,"XP_969153.1:c.353G>A","XP_969153.1:p.Arg118His","LOC657609",657609,null,"657609 [Gene Symbol: LOC657609] [Locus Tag: TcasGA2_TC004153] [Chromosome: LGX] [Map Location: ] [Description: tyrosine-protein kinase shark] [Gene Type: protein-coding]","TcasGA2_TC004153; LOC657609"]
[18,"NC_007416.3",1783949,"SNV","C","T","Homozygous",25,25,100,1,12,18,0.4,36.72,30,30,15,19,null,1,1,"no","T/T","No",1,96.74,"XP_008200056.1:c.[392C>T]; XP_015833120.1:c.[163+5641G>A]; XP_008200057.1:c.[22+4085G>A]","XP_008200056.1:p.Ala131Val","LOC657688, LOC103314824","657688 , 103314824",null,"657688 [Gene Symbol: LOC657688] [Locus Tag: TcasGA2_TC004118] [Chromosome: LGX] [Map Location: ] [Description: Kv channel-interacting protein 4] [Gene Type: protein-coding] || 103314824 [Gene Symbol: LOC103314824] [Locus Tag: TcasGA2_TC004158] [Chromosome: LGX] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC657688; TcasGA2_TC004118 || LOC103314824; TcasGA2_TC004158"]
[19,"NC_007416.3",1832098,"SNV","C","A","Homozygous",25,25,100,1,12,13,0.48,36.8,25,25,16,16,null,1,1,"no","A/A","No",1,96.73,"XP_970018.1:c.427G>T","XP_970018.1:p.Ala143Ser","LOC658543",658543,null,"658543 [Gene Symbol: LOC658543] [Locus Tag: TcasGA2_TC004115] [Chromosome: LGX] [Map Location: ] [Description: glutathione-specific gamma-glutamylcyclotransferase 1] [Gene Type: protein-coding]","LOC658543; TcasGA2_TC004115"]
[20,"NC_007416.3",1844507,"SNV","C","T","Homozygous",20,20,100,1,20,3,0.13,37.2,23,23,12,15,null,1,1,"no","T/T","No",1,81.69,"XP_008200063.1:c.1423G>A","XP_008200063.1:p.Asp475Asn","LOC658619",658619,null,"658619 [Gene Symbol: LOC658619] [Locus Tag: TcasGA2_TC004114] [Chromosome: LGX] [Map Location: ] [Description: neurogenic locus protein delta] [Gene Type: protein-coding]","LOC658619; TcasGA2_TC004114"]
[21,"NC_007416.3",2870835,"SNV","T","A","Homozygous",22,22,100,1,12,11,0.48,33.95,23,23,11,16,null,1,1,"no","A/A","No",1,87.7,"XP_968056.1:c.467T>A","XP_968056.1:p.Ile156Asn","LOC656430",656430,null,"656430 [Gene Symbol: LOC656430] [Locus Tag: TcasGA2_TC014185] [Chromosome: LGX] [Map Location: ] [Description: fork head domain-containing protein FD4] [Gene Type: protein-coding]","LOC656430; TcasGA2_TC014185"]
[22,"NC_007416.3",2920501,"SNV","C","G","Homozygous",40,40,100,1,30,12,0.29,38.77,42,42,15,22,null,1,1,"no","G/G","No",1,140.3,"XP_008193397.1:c.863G>C","XP_008193397.1:p.Gly288Ala","LOC656762",656762,null,"656762 [Gene Symbol: LOC656762] [Locus Tag: TcasGA2_TC013629] [Chromosome: LGX] [Map Location: ] [Description: nuclear pore complex protein Nup98-Nup96] [Gene Type: protein-coding]","TcasGA2_TC013629; LOC656762"]
[23,"NC_007416.3",2920537,"SNV","A","G","Homozygous",28,28,100,1,13,21,0.38,36.32,34,34,11,14,null,1,1,"no","G/G","No",1,104.17,"XP_008193397.1:c.827T>C","XP_008193397.1:p.Val276Ala","LOC656762",656762,null,"656762 [Gene Symbol: LOC656762] [Locus Tag: TcasGA2_TC013629] [Chromosome: LGX] [Map Location: ] [Description: nuclear pore complex protein Nup98-Nup96] [Gene Type: protein-coding]","TcasGA2_TC013629; LOC656762"]
[24,"NC_007416.3",2928445,"SNV","A","G","Homozygous",22,22,100,1,11,15,0.42,37,26,26,12,14,null,1,1,"no","G/G","No",1,86.11,"XP_015834239.1:c.[5947T>C]; XP_015834246.1:c.[5929T>C]; XP_015834242.1:c.[5947T>C]; XP_008193398.1:c.[5722T>C]","XP_015834239.1:p.[Ser1983Pro]; XP_015834246.1:p.[Ser1977Pro]; XP_015834242.1:p.[Ser1983Pro]; XP_008193398.1:p.[Ser1908Pro]","LOC657022",657022,null,"657022 [Gene Symbol: LOC657022] [Locus Tag: TcasGA2_TC013627] [Chromosome: LGX] [Map Location: ] [Description: centromere-associated protein E] [Gene Type: protein-coding]","TcasGA2_TC013627; LOC657022"]
[25,"NC_007416.3",2943877,"SNV","T","G","Homozygous",21,21,100,1,10,12,0.45,37.71,22,22,10,13,null,1,1,"no","G/G","No",1,83.1,"XP_008193404.1:c.[789A>C]; XP_968749.2:c.[792A>C]","XP_008193404.1:p.[Leu263Phe]; XP_968749.2:p.[Leu264Phe]","LOC657185",657185,null,"657185 [Gene Symbol: LOC657185] [Locus Tag: TcasGA2_TC013625] [Chromosome: LGX] [Map Location: ] [Description: ralA-binding protein 1] [Gene Type: protein-coding]","LOC657185; TcasGA2_TC013625"]
[26,"NC_007416.3",2972756,"SNV","T","C","Homozygous",21,21,100,1,11,13,0.46,38.38,24,24,14,18,null,1,1,"no","C/C","No",1,83.12,"XP_008193406.1:c.1264A>G","XP_008193406.1:p.Ser422Gly","LOC657569",657569,null,"657569 [Gene Symbol: LOC657569] [Locus Tag: TcasGA2_TC013622] [Chromosome: LGX] [Map Location: ] [Description: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1] [Gene Type: protein-coding]","LOC657569; TcasGA2_TC013622"]
[27,"NC_007416.3",3040171,"SNV","C","T","Homozygous",29,29,100,1,24,5,0.17,36.93,29,29,8,21,null,1,1,"no","T/T","No",1,108.77,"XP_008193408.1:c.1295G>A","XP_008193408.1:p.Arg432Gln","LOC658041",658041,null,"658041 [Gene Symbol: LOC658041] [Locus Tag: TcasGA2_TC013617] [Chromosome: LGX] [Map Location: ] [Description: heat shock protein DDB_G0288861] [Gene Type: protein-coding]","LOC658041; TcasGA2_TC013617"]
[28,"NC_007416.3",3040280,"SNV","C","G","Homozygous",36,37,97.3,1,8,30,0.21,38.22,38,39,13,14,null,0.99,1,"no","G/G","No",1,102.38,"XP_008193408.1:c.1186G>C","XP_008193408.1:p.Ala396Pro","LOC658041",658041,null,"658041 [Gene Symbol: LOC658041] [Locus Tag: TcasGA2_TC013617] [Chromosome: LGX] [Map Location: ] [Description: heat shock protein DDB_G0288861] [Gene Type: protein-coding]","LOC658041; TcasGA2_TC013617"]
[29,"NC_007416.3",3179954,"SNV","A","C","Homozygous",20,20,100,1,11,14,0.44,37,25,25,10,12,null,1,1,"no","C/C","No",1,80.11,"XP_008193419.1:c.263T>G","XP_008193419.1:p.Val88Gly","LOC103313033",103313033,null,"103313033 [Gene Symbol: LOC103313033] [Locus Tag: TcasGA2_TC013608] [Chromosome: LGX] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC013608; LOC103313033"]
[30,"NC_007416.3",3301414,"SNV","T","C","Homozygous",26,26,100,1,9,18,0.33,38.15,27,27,12,15,null,1,1,"no","C/C","No",1,98.17,"XP_015840937.1:c.[344T>C]; XP_008193439.1:c.[329T>C]; XP_966323.1:c.[329T>C]; XP_975780.1:c.[329T>C]","XP_015840937.1:p.[Ile115Thr]; XP_008193439.1:p.[Ile110Thr]; XP_966323.1:p.[Ile110Thr]; XP_975780.1:p.[Ile110Thr]","LOC659623",659623,null,"659623 [Gene Symbol: LOC659623] [Locus Tag: TcasGA2_TC014213] [Chromosome: LGX] [Map Location: ] [Description: beta-1,3-galactosyltransferase 5] [Gene Type: protein-coding]","TcasGA2_TC014213; LOC659623"]
[31,"NC_007416.3","3313378^3313379","Insertion","-","TGC","Homozygous",22,22,100,1,13,13,0.5,36.27,26,26,14,18,null,1,1,"no","TGC/TGC","No",1,200,"XP_001813884.2:c.[2504_2505insGCA]; XP_008193440.1:c.[2504_2505insGCA]","XP_001813884.2:p.[Gln835_Asn836insGln]; XP_008193440.1:p.[Gln835_Asn836insGln]","LOC660658",660658,null,"660658 [Gene Symbol: LOC660658] [Locus Tag: TcasGA2_TC013593] [Chromosome: LGX] [Map Location: ] [Description: histone-lysine N-methyltransferase, H3 lysine-79 specific] [Gene Type: protein-coding]","TcasGA2_TC013593; LOC660658"]
[32,"NC_007416.3",3424044,"SNV","T","A","Homozygous",21,21,100,1,11,10,0.48,36.14,21,21,9,11,null,1,1,"no","A/A","No",1,84.7,"XP_015833018.1:c.[179A>T]; XP_015833044.1:c.[179A>T]; XP_015833025.1:c.[179A>T]; XP_015833022.1:c.[179A>T]; XP_015833036.1:c.[179A>T]; XP_015833030.1:c.[179A>T]","XP_015833018.1:p.[Asp60Val]; XP_015833044.1:p.[Asp60Val]; XP_015833025.1:p.[Asp60Val]; XP_015833022.1:p.[Asp60Val]; XP_015833036.1:p.[Asp60Val]; XP_015833030.1:p.[Asp60Val]","LOC100141527",100141527,null,"100141527 [Gene Symbol: LOC100141527] [Locus Tag: TcasGA2_TC013586] [Chromosome: LGX] [Map Location: ] [Description: trithorax group protein osa] [Gene Type: protein-coding]","TcasGA2_TC013586; LOC100141527"]
[33,"NC_007416.3",3424108,"SNV","T","C","Homozygous",24,24,100,1,20,10,0.33,35.96,30,30,15,18,null,1,1,"no","C/C","No",1,92.14,"XP_015833036.1:c.[115A>G]; XP_015833018.1:c.[115A>G]; XP_015833022.1:c.[115A>G]; XP_015833025.1:c.[115A>G]; XP_015833044.1:c.[115A>G]; XP_015833030.1:c.[115A>G]","XP_015833036.1:p.[Arg39Gly]; XP_015833018.1:p.[Arg39Gly]; XP_015833022.1:p.[Arg39Gly]; XP_015833025.1:p.[Arg39Gly]; XP_015833044.1:p.[Arg39Gly]; XP_015833030.1:p.[Arg39Gly]","LOC100141527",100141527,null,"100141527 [Gene Symbol: LOC100141527] [Locus Tag: TcasGA2_TC013586] [Chromosome: LGX] [Map Location: ] [Description: trithorax group protein osa] [Gene Type: protein-coding]","TcasGA2_TC013586; LOC100141527"]
[34,"NC_007416.3",3424196,"SNV","G","C","Homozygous",20,20,100,1,4,17,0.19,37.15,21,21,11,12,null,1,1,"no","C/C","No",1,80.11,"XP_015833022.1:c.[27C>G]; XP_015833018.1:c.[27C>G]; XP_015833036.1:c.[27C>G]; XP_015833025.1:c.[27C>G]; XP_015833030.1:c.[27C>G]; XP_015833044.1:c.[27C>G]","XP_015833022.1:p.[His9Gln]; XP_015833018.1:p.[His9Gln]; XP_015833036.1:p.[His9Gln]; XP_015833025.1:p.[His9Gln]; XP_015833030.1:p.[His9Gln]; XP_015833044.1:p.[His9Gln]","LOC100141527",100141527,null,"100141527 [Gene Symbol: LOC100141527] [Locus Tag: TcasGA2_TC013586] [Chromosome: LGX] [Map Location: ] [Description: trithorax group protein osa] [Gene Type: protein-coding]","TcasGA2_TC013586; LOC100141527"]
[35,"NC_007416.3",3428438,"SNV","A","T","Homozygous",21,21,100,1,14,9,0.39,37.67,23,23,14,15,null,1,1,"no","T/T","No",1,84.7,"XP_001814310.1:c.515A>T","XP_001814310.1:p.Asn172Ile","LOC100142228",100142228,null,"100142228 [Gene Symbol: LOC100142228] [Locus Tag: TcasGA2_TC014218] [Chromosome: LGX] [Map Location: ] [Description: RNA pseudouridylate synthase domain-containing protein 1] [Gene Type: protein-coding]","LOC100142228; TcasGA2_TC014218"]
[36,"NC_007416.3",3487470,"SNV","G","C","Homozygous",25,25,100,1,14,13,0.48,37.96,27,27,14,18,null,1,1,"no","C/C","No",1,95.16,"XP_015833754.1:c.[5486G>C]; XP_008193469.1:c.[5471G>C]; XP_008193471.1:c.[5396G>C]; XP_015833763.1:c.[5465G>C]; XP_008193470.1:c.[5450G>C]","XP_015833754.1:p.[Ser1829Thr]; XP_008193469.1:p.[Ser1824Thr]; XP_008193471.1:p.[Ser1799Thr]; XP_015833763.1:p.[Ser1822Thr]; XP_008193470.1:p.[Ser1817Thr]","LOC661047",661047,null,"661047 [Gene Symbol: LOC661047] [Locus Tag: TcasGA2_TC014226] [Chromosome: LGX] [Map Location: ] [Description: kinesin 3A] [Gene Type: protein-coding]","TcasGA2_TC014226; kinesin-3A; LOC661047"]
[37,"NC_007416.3",3492097,"SNV","T","C","Homozygous",21,21,100,1,13,12,0.48,37.43,25,25,12,16,null,1,1,"no","C/C","No",1,83.13,"XP_008193472.1:c.997A>G","XP_008193472.1:p.Thr333Ala","LOC103313041",103313041,null,"103313041 [Gene Symbol: LOC103313041] [Locus Tag: TcasGA2_TC013580] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103313041] [Gene Type: protein-coding]","LOC103313041; TcasGA2_TC013580"]
[38,"NC_007416.3",3506898,"SNV","C","T","Homozygous",21,21,100,1,11,10,0.48,38.86,21,21,11,15,null,1,1,"no","T/T","No",1,84.7,"XP_015836098.1:c.[2204G>A]; XP_001814704.1:c.[2264G>A]","XP_015836098.1:p.[Gly735Glu]; XP_001814704.1:p.[Gly755Glu]","LOC100142224",100142224,null,"100142224 [Gene Symbol: LOC100142224] [Locus Tag: TcasGA2_TC013578] [Chromosome: LGX] [Map Location: ] [Description: zinc finger protein Xfin] [Gene Type: protein-coding]","TcasGA2_TC013578; LOC100142224"]
[39,"NC_007416.3",3591457,"SNV","C","T","Homozygous",20,20,100,1,8,14,0.36,39.45,22,22,14,13,null,1,1,"no","T/T","No",1,81.69,"XP_008193502.1:c.677C>T","XP_008193502.1:p.Thr226Ile","LOC662221",662221,null,"662221 [Gene Symbol: LOC662221] [Locus Tag: TcasGA2_TC014242] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC662221] [Gene Type: protein-coding]","TcasGA2_TC014242; LOC662221"]
[40,"NC_007416.3","3753452^3753453","Insertion","-","TT","Homozygous",21,25,84,1,9,12,0.43,38.46,21,25,13,15,2.81,0.79,0.99,"no","TT/TT","No",1,200,"XP_966761.1:c.[233_234insAA]; XP_008199827.1:c.[233_234insAA]","XP_966761.1:p.[Thr79fs]; XP_008199827.1:p.[Thr79fs]","LOC655160",655160,null,"655160 [Gene Symbol: LOC655160] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: cysteine-rich hydrophobic domain-containing protein 2] [Gene Type: protein-coding]","LOC655160"]
[41,"NC_007416.3",3877146,"SNV","T","C","Homozygous",25,25,100,1,16,15,0.48,38.56,31,31,15,18,null,1,1,"no","C/C","No",1,95.16,"XP_008199830.1:c.[368T>C]; XP_015836742.1:c.[368T>C]; XP_008199829.1:c.[368T>C]","XP_008199830.1:p.[Leu123Ser]; XP_015836742.1:p.[Leu123Ser]; XP_008199829.1:p.[Leu123Ser]","LOC103314770",103314770,null,"103314770 [Gene Symbol: LOC103314770] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: lymphoid-specific helicase-like] [Gene Type: protein-coding]","LOC103314770"]
[42,"NC_007416.3",3881460,"SNV","C","G","Homozygous",22,22,100,1,17,5,0.23,35.91,22,22,10,15,null,1,1,"no","G/G","No",1,86.11,"XP_008199831.1:c.[318C>G]; XP_015834832.1:c.[159C>G]","XP_008199831.1:p.[Asp106Glu]; XP_015834832.1:p.[Asp53Glu]","LOC103314771",103314771,null,"103314771 [Gene Symbol: LOC103314771] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314771] [Gene Type: protein-coding]","LOC103314771"]
[43,"NC_007416.3",3904377,"SNV","C","T","Homozygous",20,21,95.24,1,9,11,0.45,37.5,20,21,13,16,null,0.99,1,"no","T/T","No",1,53.05,"XP_008199839.1:c.1061G>A","XP_008199839.1:p.Gly354Asp","LOC656636",656636,null,"656636 [Gene Symbol: LOC656636] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: adenosylhomocysteinase 2-like] [Gene Type: protein-coding]","LOC656636"]
[44,"NC_007416.3",3905138,"SNV","A","G","Homozygous",24,24,100,1,18,11,0.38,36.29,29,29,13,15,null,1,1,"no","G/G","No",1,92.13,"XP_008199839.1:c.446T>C","XP_008199839.1:p.Leu149Ser","LOC656636",656636,null,"656636 [Gene Symbol: LOC656636] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: adenosylhomocysteinase 2-like] [Gene Type: protein-coding]","LOC656636"]
[45,"NC_007416.3",3905271,"SNV","G","A","Homozygous",30,30,100,1,12,26,0.32,36.83,38,38,14,17,null,1,1,"no","A/A","No",1,111.77,"XP_008199839.1:c.359C>T","XP_008199839.1:p.Ser120Leu","LOC656636",656636,null,"656636 [Gene Symbol: LOC656636] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: adenosylhomocysteinase 2-like] [Gene Type: protein-coding]","LOC656636"]
[46,"NC_007416.3","3905314^3905315","Insertion","-","A","Homozygous",22,22,100,1,9,17,0.35,37.14,26,26,13,14,null,1,1,"no","A/A","No",1,87.71,"XP_008199839.1:c.315_316insT","XP_008199839.1:p.Ala106fs","LOC656636",656636,null,"656636 [Gene Symbol: LOC656636] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: adenosylhomocysteinase 2-like] [Gene Type: protein-coding]","LOC656636"]
[47,"NC_007416.3",3907160,"SNV","C","G","Homozygous",23,23,100,1,8,18,0.31,36.7,26,26,12,15,null,1,1,"no","G/G","No",1,89.12,"XP_008199838.1:c.[267C>G]; XP_015840526.1:c.[267C>G]","XP_008199838.1:p.[Ile89Met]; XP_015840526.1:p.[Ile89Met]","LOC656803",656803,null,"656803 [Gene Symbol: LOC656803] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: eukaryotic translation initiation factor 2D] [Gene Type: protein-coding]","LOC656803"]
[48,"NC_007416.3",3909268,"SNV","G","A","Homozygous",25,28,89.29,1,10,20,0.33,38.2,30,33,16,18,null,0.97,1,"no","A/A","No",1,26.05,"XP_001808435.1:c.274G>A","XP_001808435.1:p.Val92Ile","LOC656981",656981,null,"656981 [Gene Symbol: LOC656981] [Locus Tag: TcasGA2_TC034215] [Chromosome: LGX] [Map Location: ] [Description: ADP-ribosylation factor 2] [Gene Type: protein-coding]","TcasGA2_TC034215; LOC656981"]
[49,"NC_007416.3",4485021,"SNV","G","A","Homozygous",25,25,100,1,8,19,0.3,36.32,27,27,15,16,null,1,1,"no","A/A","No",1,96.73,"XP_008200559.1:c.[350C>T]; XP_008200560.1:c.[350-3C>T]; XP_015833215.1:c.[7+7681G>A]","XP_008200559.1:p.Thr117Ile","LOC659958, LOC659760","659958 , 659760",null,"659958 [Gene Symbol: LOC659958] [Locus Tag: TcasGA2_TC004719] [Chromosome: LGX] [Map Location: ] [Description: nipped-B-like protein] [Gene Type: protein-coding] || 659760 [Gene Symbol: LOC659760] [Locus Tag: TcasGA2_TC004647] [Chromosome: LGX] [Map Location: ] [Description: cytosolic carboxypeptidase 6] [Gene Type: protein-coding]","TcasGA2_TC004719; LOC659958 || TcasGA2_TC004647; LOC659760"]
[50,"NC_007416.3",4628456,"SNV","A","G","Homozygous",21,21,100,1,10,11,0.48,37.14,21,21,13,16,null,1,1,"no","G/G","No",1,83.1,"XP_972507.2:c.697A>G","XP_972507.2:p.Thr233Ala","LOC661239",661239,null,"661239 [Gene Symbol: LOC661239] [Locus Tag: TcasGA2_TC005168] [Chromosome: LGX] [Map Location: ] [Description: putative GTP-binding protein 6] [Gene Type: protein-coding]","LOC661239; TcasGA2_TC005168"]
[51,"NC_007416.3",4641426,"SNV","T","C","Homozygous",23,23,100,1,16,11,0.41,37.74,27,27,14,16,null,1,1,"no","C/C","No",1,86.13,"XP_001810773.1:c.[568A>G]; XP_015833597.1:c.[343A>G]","XP_001810773.1:p.[Thr190Ala]; XP_015833597.1:p.[Thr115Ala]","LOC661025, LOC100142196","661025 , 100142196",null,"661025 [Gene Symbol: LOC661025] [Locus Tag: TcasGA2_TC005170] [Chromosome: LGX] [Map Location: ] [Description: nuclear protein MDM1] [Gene Type: protein-coding] || 100142196 [Gene Symbol: LOC100142196] [Locus Tag: TcasGA2_TC031524] [Chromosome: LGX] [Map Location: ] [Description: delta(24)-sterol reductase-like] [Gene Type: protein-coding]","TcasGA2_TC005170; LOC661025 || TcasGA2_TC031524; LOC100142196"]
[52,"NC_007416.3",4641739,"SNV","T","A","Homozygous",21,21,100,1,9,13,0.41,39.48,22,22,14,16,null,1,1,"no","A/A","No",1,84.7,"XP_001810773.1:c.[303A>T]; XP_015833597.1:c.[78A>T]","XP_001810773.1:p.[Glu101Asp]; XP_015833597.1:p.[Glu26Asp]","LOC661025, LOC100142196","661025 , 100142196",null,"661025 [Gene Symbol: LOC661025] [Locus Tag: TcasGA2_TC005170] [Chromosome: LGX] [Map Location: ] [Description: nuclear protein MDM1] [Gene Type: protein-coding] || 100142196 [Gene Symbol: LOC100142196] [Locus Tag: TcasGA2_TC031524] [Chromosome: LGX] [Map Location: ] [Description: delta(24)-sterol reductase-like] [Gene Type: protein-coding]","TcasGA2_TC005170; LOC661025 || TcasGA2_TC031524; LOC100142196"]
[53,"NC_007416.3",4939841,"SNV","A","T","Homozygous",22,23,95.65,1,6,19,0.24,36.45,25,26,13,12,null,1,1,"no","T/T","No",1,61.6,"XP_966867.1:c.807A>T","XP_966867.1:p.Glu269Asp","LOC660971",660971,null,"660971 [Gene Symbol: LOC660971] [Locus Tag: TcasGA2_TC031545] [Chromosome: LGX] [Map Location: ] [Description: EH domain-containing protein 3-like] [Gene Type: protein-coding]","LOC660971; TcasGA2_TC031545"]
[54,"NC_007416.3",4939848,"SNV","A","G","Homozygous",21,21,100,1,5,18,0.22,36.19,23,23,14,13,null,1,1,"no","G/G","No",1,83.1,"XP_966867.1:c.814A>G","XP_966867.1:p.Lys272Glu","LOC660971",660971,null,"660971 [Gene Symbol: LOC660971] [Locus Tag: TcasGA2_TC031545] [Chromosome: LGX] [Map Location: ] [Description: EH domain-containing protein 3-like] [Gene Type: protein-coding]","LOC660971; TcasGA2_TC031545"]
[55,"NC_007416.3",4971107,"SNV","T","G","Homozygous",21,21,100,1,8,16,0.33,38.57,24,24,13,16,null,1,1,"no","G/G","No",1,83.1,"XP_973837.1:c.77A>C","XP_973837.1:p.Tyr26Ser","LOC662660",662660,null,"662660 [Gene Symbol: LOC662660] [Locus Tag: TcasGA2_TC010884] [Chromosome: LGX] [Map Location: ] [Description: BCL2/adenovirus E1B 19 kDa protein-interacting protein 3] [Gene Type: protein-coding]","TcasGA2_TC010884; LOC662660"]
[56,"NC_007416.3",5191058,"SNV","C","A","Heterozygous",5,20,25,0.98,5,0,0,39.6,5,21,1,2,1.83,0.01,0.03,"no","A/C","No",1,17.17,"XP_015835466.1:c.[1423G>T]; XP_972902.1:c.[1324G>T]","XP_015835466.1:p.[Ala475Ser]; XP_972902.1:p.[Ala442Ser]","LOC661660",661660,null,"661660 [Gene Symbol: LOC661660] [Locus Tag: TcasGA2_TC010866] [Chromosome: LGX] [Map Location: ] [Description: GTP-binding protein 2] [Gene Type: protein-coding]","TcasGA2_TC010866; LOC661660"]
[57,"NC_007416.3",5545324,"SNV","G","A","Homozygous",20,20,100,1,10,10,0.5,40.15,20,20,13,13,null,1,1,"no","A/A","No",1,81.69,"XP_971882.1:c.680G>A","XP_971882.1:p.Arg227Lys","LOC660567",660567,null,"660567 [Gene Symbol: LOC660567] [Locus Tag: TcasGA2_TC010791] [Chromosome: LGX] [Map Location: ] [Description: deoxynucleoside kinase] [Gene Type: protein-coding]","TcasGA2_TC010791; LOC660567"]
[58,"NC_007416.3",5841812,"SNV","C","G","Homozygous",21,21,100,1,12,16,0.43,38.43,28,28,13,14,null,1,1,"no","G/G","No",1,83.1,"XP_015839288.1:c.157C>G","XP_015839288.1:p.Gln53Glu","LOC659419",659419,null,"659419 [Gene Symbol: LOC659419] [Locus Tag: TcasGA2_TC010801] [Chromosome: LGX] [Map Location: ] [Description: dynein heavy chain 7, axonemal] [Gene Type: protein-coding]","LOC659419; TcasGA2_TC010801"]
[59,"NC_007416.3","5862849..5862850","MNV","TG","CA","Heterozygous",7,20,35,1,6,1,0.14,39.86,7,21,3,4,null,0.1,0.93,"no","complex","No",1,200,"XP_970551.1:c.[1571_1572delCAinsTG]; XP_015836824.1:c.[1571_1572delCAinsTG]","XP_970551.1:p.[Ala524Val]; XP_015836824.1:p.[Ala524Val]","LOC659126",659126,null,"659126 [Gene Symbol: LOC659126] [Locus Tag: TcasGA2_TC010840] [Chromosome: LGX] [Map Location: ] [Description: nuclear polyadenylated RNA-binding protein 3] [Gene Type: protein-coding]","LOC659126; TcasGA2_TC010840"]
[60,"NC_007416.3",5862850,"SNV","G","A","Heterozygous",13,20,65,1,10,4,0.29,35.38,14,21,11,12,null,0.54,0.99,"no","complex","No",1,200,"XP_015836824.1:c.[1571C>T]; XP_970551.1:c.[1571C>T]","XP_015836824.1:p.[Ala524Val]; XP_970551.1:p.[Ala524Val]","LOC659126",659126,null,"659126 [Gene Symbol: LOC659126] [Locus Tag: TcasGA2_TC010840] [Chromosome: LGX] [Map Location: ] [Description: nuclear polyadenylated RNA-binding protein 3] [Gene Type: protein-coding]","LOC659126; TcasGA2_TC010840"]
[61,"NC_007416.3",5895980,"SNV","A","C","Heterozygous",13,20,65,1,7,8,0.47,37.46,15,22,7,7,-0.32,0.88,1,"no","A/C","No",1,42.62,"XP_008199374.2:c.[2516A>C]; XP_015834081.1:c.[2411A>C]; XP_008199373.2:c.[2183A>C]; XP_015834064.1:c.[2516A>C]; XP_015834073.1:c.[2504A>C]","XP_008199374.2:p.[Glu839Ala]; XP_015834081.1:p.[Glu804Ala]; XP_008199373.2:p.[Glu728Ala]; XP_015834064.1:p.[Glu839Ala]; XP_015834073.1:p.[Glu835Ala]","LOC103314649",103314649,null,"103314649 [Gene Symbol: LOC103314649] [Locus Tag: TcasGA2_TC031532] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314649] [Gene Type: protein-coding]","TcasGA2_TC031532; LOC103314649"]
[62,"NC_007416.3",5994460,"SNV","C","T","Heterozygous",6,21,28.57,1,4,2,0.33,38.67,6,22,4,4,0.62,0.31,0.98,"no","C/T","No",1,30.67,"XP_008199367.1:c.[328G>A]; XP_008199366.1:c.[328G>A]","XP_008199367.1:p.[Ala110Thr]; XP_008199366.1:p.[Ala110Thr]","LOC658614",658614,null,"658614 [Gene Symbol: LOC658614] [Locus Tag: TcasGA2_TC010838] [Chromosome: LGX] [Map Location: ] [Description: ubiquitin carboxyl-terminal hydrolase 8] [Gene Type: protein-coding]","LOC658614; TcasGA2_TC010838"]
[63,"NC_007416.3",6007048,"SNV","G","C","Heterozygous",16,22,72.73,0.98,14,2,0.12,37.56,16,22,9,13,-0.37,0.94,0.98,"no","C/G","No",1,16.66,"XP_969735.1:c.734G>C","XP_969735.1:p.Gly245Ala","LOC658236",658236,null,"658236 [Gene Symbol: LOC658236] [Locus Tag: TcasGA2_TC010817] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC658236] [Gene Type: protein-coding]","LOC658236; TcasGA2_TC010817"]
[64,"NC_007416.3",6007423,"SNV","C","T","Homozygous",17,20,85,0.7,5,14,0.26,38.53,19,22,9,9,null,0.96,1,"no","T/T","No",1,5.28,"XP_969735.1:c.1109C>T","XP_969735.1:p.Thr370Met","LOC658236",658236,null,"658236 [Gene Symbol: LOC658236] [Locus Tag: TcasGA2_TC010817] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC658236] [Gene Type: protein-coding]","LOC658236; TcasGA2_TC010817"]
[65,"NC_007416.3",6007445,"SNV","G","C","Homozygous",23,23,100,1,2,22,0.08,39.04,24,24,10,11,null,1,1,"no","C/C","No",1,89.14,"XP_969735.1:c.1131G>C","XP_969735.1:p.Glu377Asp","LOC658236",658236,null,"658236 [Gene Symbol: LOC658236] [Locus Tag: TcasGA2_TC010817] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC658236] [Gene Type: protein-coding]","LOC658236; TcasGA2_TC010817"]
[66,"NC_007416.3",6297070,"SNV","A","G","Homozygous",22,22,100,1,13,13,0.5,38.41,26,26,14,15,null,1,1,"no","G/G","No",1,86.11,"XP_967484.2:c.246A>G","XP_967484.2:p.Ile82Met","LOC655828",655828,null,"655828 [Gene Symbol: LOC655828] [Locus Tag: TcasGA2_TC004742] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC655828] [Gene Type: protein-coding]","LOC655828; TcasGA2_TC004742"]
[67,"NC_007416.3","6375294..6375295","MNV","AC","GT","Heterozygous",11,28,39.29,1,8,3,0.27,36.85,11,30,6,8,-1.66,0.6,1,"no","complex","No",1,200,"XP_968183.1:c.1726_1727delACinsGT","XP_968183.1:p.Thr576Val","LOC656569",656569,null,"656569 [Gene Symbol: LOC656569] [Locus Tag: TcasGA2_TC004751] [Chromosome: LGX] [Map Location: ] [Description: kinesin-like protein KIF11-B] [Gene Type: protein-coding]","TcasGA2_TC004751; LOC656569"]
[68,"NC_007416.3",6388527,"SNV","C","T","Heterozygous",6,22,27.27,0.98,5,2,0.29,36.83,7,24,5,6,-0.92,0.22,0.62,"no","C/T","No",1,18.06,"XP_968416.2:c.38G>A","XP_968416.2:p.Cys13Tyr","LOC656822",656822,null,"656822 [Gene Symbol: LOC656822] [Locus Tag: TcasGA2_TC004622] [Chromosome: LGX] [Map Location: ] [Description: serine protease H51] [Gene Type: protein-coding]","H51; LOC656822; TcasGA2_TC004622"]
[69,"NC_007416.3","6535462^6535463","Insertion","-","T","Homozygous",25,25,100,1,14,11,0.44,36.24,25,25,16,17,null,1,1,"no","T/T","No",1,96.74,"XP_015834338.1:c.3069_3070insT","XP_015834338.1:p.Ser1024fs","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[70,"NC_007416.3",6535545,"SNV","T","A","Homozygous",26,26,100,1,11,16,0.41,36.62,27,27,16,17,null,1,1,"no","A/A","No",1,99.74,"XP_015834338.1:c.3152T>A","XP_015834338.1:p.Leu1051*","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[71,"NC_007416.3",6535686,"SNV","G","T","Heterozygous",8,21,38.1,1,5,4,0.44,37.62,9,24,4,6,-0.27,0.9,1,"no","G/T","No",1,53.91,"XP_015834338.1:c.3293G>T","XP_015834338.1:p.Arg1098Leu","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[72,"NC_007416.3",7398998,"SNV","C","G","Homozygous",21,21,100,1,5,19,0.21,35.43,24,24,10,11,null,1,1,"no","G/G","No",1,83.1,"XP_008200761.1:c.[476C>G]; XP_015840859.1:c.[476C>G]","XP_008200761.1:p.[Thr159Ser]; XP_015840859.1:p.[Thr159Ser]","LOC661242",661242,null,"661242 [Gene Symbol: LOC661242] [Locus Tag: TcasGA2_TC004799] [Chromosome: LGX] [Map Location: ] [Description: dnaJ protein homolog 1] [Gene Type: protein-coding]","TcasGA2_TC004799; LOC661242"]
[73,"NC_007416.3","7404889..7404890","MNV","GT","AG","Homozygous",20,20,100,1,16,4,0.2,38.4,20,20,11,15,null,1,1,"no","AG/AG","No",1,200,"XP_015840803.1:c.[434_435delACinsCT]; XP_008200769.1:c.[434_435delACinsCT]; XP_015840796.1:c.[518_519delACinsCT]; XP_015840811.1:c.[320_321delACinsCT]; XP_015840810.1:c.[434_435delACinsCT]","XP_015840803.1:p.[Asp145Ala]; XP_008200769.1:p.[Asp145Ala]; XP_015840796.1:p.[Asp173Ala]; XP_015840811.1:p.[Asp107Ala]; XP_015840810.1:p.[Asp145Ala]","LOC661785",661785,null,"661785 [Gene Symbol: LOC661785] [Locus Tag: TcasGA2_TC004579] [Chromosome: LGX] [Map Location: ] [Description: peroxidase] [Gene Type: protein-coding]","LOC661785; TcasGA2_TC004579"]
[74,"NC_007416.3",7405013,"SNV","C","G","Homozygous",29,29,100,1,10,19,0.34,38.59,29,29,15,23,null,1,1,"no","G/G","No",1,107.17,"XP_015840796.1:c.[395G>C]; XP_015840803.1:c.[311G>C]; XP_015840811.1:c.[197G>C]; XP_015840810.1:c.[311G>C]; XP_008200769.1:c.[311G>C]","XP_015840796.1:p.[Ser132Thr]; XP_015840803.1:p.[Ser104Thr]; XP_015840811.1:p.[Ser66Thr]; XP_015840810.1:p.[Ser104Thr]; XP_008200769.1:p.[Ser104Thr]","LOC661785",661785,null,"661785 [Gene Symbol: LOC661785] [Locus Tag: TcasGA2_TC004579] [Chromosome: LGX] [Map Location: ] [Description: peroxidase] [Gene Type: protein-coding]","LOC661785; TcasGA2_TC004579"]
[75,"NC_007416.3",7405139,"SNV","C","T","Homozygous",25,25,100,1,5,21,0.19,38.56,26,26,10,12,null,1,1,"no","T/T","No",1,96.74,"XP_015840811.1:c.[71G>A]; XP_015840803.1:c.[185G>A]; XP_015840810.1:c.[185G>A]; XP_008200769.1:c.[185G>A]; XP_015840796.1:c.[269G>A]","XP_015840811.1:p.[Arg24Lys]; XP_015840803.1:p.[Arg62Lys]; XP_015840810.1:p.[Arg62Lys]; XP_008200769.1:p.[Arg62Lys]; XP_015840796.1:p.[Arg90Lys]","LOC661785",661785,null,"661785 [Gene Symbol: LOC661785] [Locus Tag: TcasGA2_TC004579] [Chromosome: LGX] [Map Location: ] [Description: peroxidase] [Gene Type: protein-coding]","LOC661785; TcasGA2_TC004579"]
[76,"NC_007416.3","7592673^7592674","Insertion","-","CT","Heterozygous",7,20,35,1,5,2,0.29,36.64,7,25,5,7,0.31,0.69,0.87,"no","complex","No",1,200,"XP_015840777.1:c.[391+79935_391+79936insCT]; XP_015840873.1:c.[69_70insCT]; XP_015840780.1:c.[199+79935_199+79936insCT]","XP_015840873.1:p.Ser25fs","LOC660322, LOC107399269","660322 , 107399269",null,"660322 [Gene Symbol: LOC660322] [Locus Tag: TcasGA2_TC001692] [Chromosome: LGX] [Map Location: ] [Description: zinc finger protein basonuclin-2] [Gene Type: protein-coding] || 107399269 [Gene Symbol: LOC107399269] [Locus Tag: TcasGA2_TC031582] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC107399269] [Gene Type: protein-coding]","disco-r; TcasGA2_TC001692; LOC660322 || LOC107399269; TcasGA2_TC031582"]
[77,"NC_007416.3",7923356,"SNV","C","T","Homozygous",22,22,100,1,11,12,0.48,35.27,23,23,11,14,null,1,1,"no","T/T","No",1,87.71,"XP_008199058.1:c.1012G>A","XP_008199058.1:p.Ala338Thr","LOC658611",658611,null,"658611 [Gene Symbol: LOC658611] [Locus Tag: TcasGA2_TC001759] [Chromosome: LGX] [Map Location: ] [Description: rho guanine nucleotide exchange factor 17] [Gene Type: protein-coding]","TcasGA2_TC001759; LOC658611"]
[78,"NC_007416.3",8670757,"SNV","C","T","Heterozygous",8,33,24.24,0.99,8,1,0.11,40.25,9,35,5,6,1.37,0.24,0.06,"no","C/T","No",1,22.77,"XP_008199008.1:c.[196C>T]; XP_008199007.1:c.[253C>T]; XP_015836611.1:c.[196C>T]","XP_008199008.1:p.[His66Tyr]; XP_008199007.1:p.[His85Tyr]; XP_015836611.1:p.[His66Tyr]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[79,"NC_007416.3",8671088,"SNV","C","A","Heterozygous",23,35,65.71,1,17,7,0.29,37.57,24,36,16,17,0.14,0.97,0.99,"no","A/C","No",1,69.08,"XP_008199007.1:c.[584C>A]; XP_008199008.1:c.[527C>A]; XP_015836611.1:c.[527C>A]","XP_008199007.1:p.[Ala195Glu]; XP_008199008.1:p.[Ala176Glu]; XP_015836611.1:p.[Ala176Glu]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[80,"NC_007416.3",8671200,"SNV","A","T","Heterozygous",13,44,29.55,1,10,4,0.29,39,14,47,7,7,-0.28,0.68,0.66,"no","A/T","No",1,55.98,"XP_015836611.1:c.[639A>T]; XP_008199007.1:c.[696A>T]; XP_008199008.1:c.[639A>T]","XP_015836611.1:p.[Lys213Asn]; XP_008199007.1:p.[Lys232Asn]; XP_008199008.1:p.[Lys213Asn]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[81,"NC_007416.3",8671411,"SNV","G","A","Heterozygous",21,45,46.67,1,11,15,0.42,39.38,26,58,11,12,2.8,0.27,1,"no","A/G","No",1,153.53,"XP_008199007.1:c.[907G>A]; XP_015836611.1:c.[850G>A]; XP_008199008.1:c.[850G>A]","XP_008199007.1:p.[Ala303Thr]; XP_015836611.1:p.[Ala284Thr]; XP_008199008.1:p.[Ala284Thr]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[82,"NC_007416.3",8671552,"SNV","A","G","Homozygous",29,32,90.62,1,14,18,0.44,38.97,32,35,19,19,null,1,1,"no","G/G","No",1,38.26,"XP_008199008.1:c.[991A>G]; XP_008199007.1:c.[1048A>G]; XP_015836611.1:c.[991A>G]","XP_008199008.1:p.[Lys331Glu]; XP_008199007.1:p.[Lys350Glu]; XP_015836611.1:p.[Lys331Glu]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[83,"NC_007417.3",501203,"SNV","A","G","Homozygous",22,22,100,1,13,13,0.5,38.5,26,26,11,13,null,1,1,"no","G/G","No",1,86.11,"XP_015837142.1:c.184A>G","XP_015837142.1:p.Thr62Ala","LOC107398244",107398244,null,"107398244 [Gene Symbol: LOC107398244] [Locus Tag: TcasGA2_TC030400] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC107398244] [Gene Type: protein-coding]","TcasGA2_TC030400; LOC107398244; Or263"]
[84,"NC_007417.3",1910778,"SNV","G","A","Heterozygous",21,30,70,1,12,12,0.5,38.33,24,34,14,15,0.59,0.96,1,"no","A/G","No",1,44.98,"XP_015837412.1:c.404C>T","XP_015837412.1:p.Ser135Phe","LOC658166, LOC107398294","658166 , 107398294",null,"658166 [Gene Symbol: LOC658166] [Locus Tag: TcasGA2_TC005236] [Chromosome: LG2] [Map Location: ] [Description: thrombospondin type-1 domain-containing protein 1] [Gene Type: protein-coding] || 107398294 [Gene Symbol: LOC107398294] [Locus Tag: TcasGA2_TC032004] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC107398294] [Gene Type: protein-coding]","TcasGA2_TC005236; LOC658166 || LOC107398294; TcasGA2_TC032004"]
[85,"NC_007417.3",1910805,"Deletion","T","-","Homozygous",26,26,100,1,14,15,0.48,37.85,29,29,19,20,null,1,1,"no","-/-","No",1,108.77,"XP_015837412.1:c.377delA","XP_015837412.1:p.His126fs","LOC658166, LOC107398294","658166 , 107398294",null,"658166 [Gene Symbol: LOC658166] [Locus Tag: TcasGA2_TC005236] [Chromosome: LG2] [Map Location: ] [Description: thrombospondin type-1 domain-containing protein 1] [Gene Type: protein-coding] || 107398294 [Gene Symbol: LOC107398294] [Locus Tag: TcasGA2_TC032004] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC107398294] [Gene Type: protein-coding]","TcasGA2_TC005236; LOC658166 || LOC107398294; TcasGA2_TC032004"]
[86,"NC_007417.3",1910836,"SNV","T","C","Homozygous",25,25,100,1,11,16,0.41,39.64,27,27,17,18,null,1,1,"no","C/C","No",1,95.16,"XP_015837412.1:c.346A>G","XP_015837412.1:p.Met116Val","LOC658166, LOC107398294","658166 , 107398294",null,"658166 [Gene Symbol: LOC658166] [Locus Tag: TcasGA2_TC005236] [Chromosome: LG2] [Map Location: ] [Description: thrombospondin type-1 domain-containing protein 1] [Gene Type: protein-coding] || 107398294 [Gene Symbol: LOC107398294] [Locus Tag: TcasGA2_TC032004] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC107398294] [Gene Type: protein-coding]","TcasGA2_TC005236; LOC658166 || LOC107398294; TcasGA2_TC032004"]
[87,"NC_007417.3",2411347,"SNV","G","A","Homozygous",21,21,100,1,12,9,0.43,39.19,21,21,14,12,null,1,1,"no","A/A","No",1,84.7,"XP_015838988.1:c.1475C>T","XP_015838988.1:p.Thr492Ile","LOC100141711",100141711,null,"100141711 [Gene Symbol: LOC100141711] [Locus Tag: TcasGA2_TC004562] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC100141711] [Gene Type: protein-coding]","LOC100141711; TcasGA2_TC004562"]
[88,"NC_007417.3",2411359,"SNV","A","G","Homozygous",20,20,100,1,12,8,0.4,39.1,20,20,13,12,null,1,1,"no","G/G","No",1,80.09,"XP_015838988.1:c.1463T>C","XP_015838988.1:p.Ile488Thr","LOC100141711",100141711,null,"100141711 [Gene Symbol: LOC100141711] [Locus Tag: TcasGA2_TC004562] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC100141711] [Gene Type: protein-coding]","LOC100141711; TcasGA2_TC004562"]
[89,"NC_007417.3",2449462,"SNV","T","C","Homozygous",20,23,86.96,0.95,11,9,0.45,38.4,20,23,12,11,null,0.98,1,"no","C/C","No",1,13.22,"XP_008200824.1:c.[392T>C]; XP_967953.2:c.[392T>C]; XP_976189.2:c.[392T>C]","XP_008200824.1:p.[Val131Ala]; XP_967953.2:p.[Val131Ala]; XP_976189.2:p.[Val131Ala]","LOC656404",656404,null,"656404 [Gene Symbol: LOC656404] [Locus Tag: TcasGA2_TC004824] [Chromosome: LG2] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC656404; TcasGA2_TC004824"]
[90,"NC_007417.3",3251979,"SNV","A","C","Homozygous",18,20,90,0.99,12,10,0.45,39.06,22,24,11,13,null,0.99,1,"no","C/C","No",1,22.87,"XP_015837890.1:c.2221T>G","XP_015837890.1:p.Phe741Val","LOC103314980",103314980,null,"103314980 [Gene Symbol: LOC103314980] [Locus Tag: TcasGA2_TC004523] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: uncharacterized LOC103314980] [Gene Type: protein-coding]","P46; LOC103314980; TcasGA2_TC004523"]
[91,"NC_007417.3",3665163,"SNV","C","T","Heterozygous",10,20,50,1,8,5,0.38,37.7,13,26,6,9,0.53,0.7,1,"no","C/T","No",1,81.97,"XP_015839059.1:c.2110G>A","XP_015839059.1:p.Glu704Lys","LOC658704",658704,null,"658704 [Gene Symbol: LOC658704] [Locus Tag: TcasGA2_TC004504] [Chromosome: LG2] [Map Location: ] [Description: protein FAM184A] [Gene Type: protein-coding]","TcasGA2_TC004504; LOC658704"]
[92,"NC_007417.3",3665178,"SNV","C","T","Homozygous",21,21,100,1,14,10,0.42,37.57,24,24,12,16,null,1,1,"no","T/T","No",1,84.71,"XP_015839059.1:c.2095G>A","XP_015839059.1:p.Gly699Arg","LOC658704",658704,null,"658704 [Gene Symbol: LOC658704] [Locus Tag: TcasGA2_TC004504] [Chromosome: LG2] [Map Location: ] [Description: protein FAM184A] [Gene Type: protein-coding]","TcasGA2_TC004504; LOC658704"]
[93,"NC_007417.3",3666810,"SNV","G","T","Homozygous",22,22,100,1,10,19,0.34,38.95,29,29,12,13,null,1,1,"no","T/T","No",1,87.71,"XP_015839059.1:c.671C>A","XP_015839059.1:p.Thr224Asn","LOC658704",658704,null,"658704 [Gene Symbol: LOC658704] [Locus Tag: TcasGA2_TC004504] [Chromosome: LG2] [Map Location: ] [Description: protein FAM184A] [Gene Type: protein-coding]","TcasGA2_TC004504; LOC658704"]
[94,"NC_007417.3",3743102,"SNV","G","A","Heterozygous",7,23,30.43,1,3,4,0.43,35.29,7,25,5,5,-1.3,0.34,1,"no","A/G","No",1,38.14,"XP_015838488.1:c.[748C>T]; XP_008200885.1:c.[748C>T]; XP_015838479.1:c.[748C>T]; XP_008200884.1:c.[748C>T]; XP_015838476.1:c.[748C>T]","XP_015838488.1:p.[Leu250Phe]; XP_008200885.1:p.[Leu250Phe]; XP_015838479.1:p.[Leu250Phe]; XP_008200884.1:p.[Leu250Phe]; XP_015838476.1:p.[Leu250Phe]","LOC659560",659560,null,"659560 [Gene Symbol: LOC659560] [Locus Tag: TcasGA2_TC004497] [Chromosome: LG2] [Map Location: ] [Description: protein hu-li tai shao] [Gene Type: protein-coding]","hts; TcasGA2_TC004497; LOC659560"]
[95,"NC_007417.3",3757790,"SNV","T","C","Homozygous",20,20,100,1,12,14,0.46,39.6,26,26,11,14,null,1,1,"no","C/C","No",1,80.12,"XP_008200886.1:c.428A>G","XP_008200886.1:p.His143Arg","LOC659762",659762,null,"659762 [Gene Symbol: LOC659762] [Locus Tag: TcasGA2_TC004496] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: Fanconi anemia group I protein homolog] [Gene Type: protein-coding]","TcasGA2_TC004496; LOC659762"]
[96,"NC_007417.3",4308521,"SNV","G","T","Homozygous",22,22,100,1,11,12,0.48,36.5,23,23,16,13,null,1,1,"no","T/T","No",1,87.71,"XP_976370.1:c.673C>A","XP_976370.1:p.Pro225Thr","LOC661087",661087,null,"661087 [Gene Symbol: LOC661087] [Locus Tag: TcasGA2_TC004478] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC661087] [Gene Type: protein-coding]","LOC661087; TcasGA2_TC004478"]
[97,"NC_007417.3","4567739..4567741","Deletion","CGA","-","Homozygous",21,21,100,1,11,10,0.48,35.05,21,21,7,14,null,1,1,"no","-/-","No",1,200,"XP_008200863.1:c.818_820delCGA","XP_008200863.1:p.Thr279del","Srf",661307,"serum response factor","661307 [Gene Symbol: Srf] [Locus Tag: TcasGA2_TC004911] [Chromosome: LG2] [Map Location: ] [Description: serum response factor] [Gene Type: protein-coding]","Srf; bs; TcasGA2_TC004911"]
[98,"NC_007417.3",4850135,"SNV","A","C","Heterozygous",15,22,68.18,1,12,5,0.29,37.67,17,24,9,13,0,0.97,0.88,"no","A/C","No",1,37.04,"XP_015838119.1:c.[6598-17318T>G]; XP_015838115.1:c.[6598-17318T>G]; XP_008200937.1:c.[171T>G]","XP_008200937.1:p.Asp57Glu","LOC655913, LOC654906","655913 , 654906",null,"655913 [Gene Symbol: LOC655913] [Locus Tag: TcasGA2_TC004440] [Chromosome: LG2] [Map Location: ] [Description: vacuolar protein sorting-associated protein 13C] [Gene Type: protein-coding] || 654906 [Gene Symbol: LOC654906] [Locus Tag: TcasGA2_TC004450] [Chromosome: LG2] [Map Location: ] [Description: glutathione S-transferase 1] [Gene Type: protein-coding]","LOC655913; TcasGA2_TC004440 || TcasGA2_TC004450; LOC654906"]
[99,"NC_007417.3",4933116,"SNV","T","A","Homozygous",22,22,100,1,9,14,0.39,37.77,23,23,12,12,null,1,1,"no","A/A","No",1,87.7,"XP_967796.2:c.4030A>T","XP_967796.2:p.Thr1344Ser","LOC656158",656158,null,"656158 [Gene Symbol: LOC656158] [Locus Tag: TcasGA2_TC004438] [Chromosome: LG2] [Map Location: ] [Description: toll-like receptor 3] [Gene Type: protein-coding]","LOC656158; Toll3; TcasGA2_TC004438"]
[100,"NC_007417.3",4949349,"SNV","G","C","Homozygous",20,20,100,1,6,15,0.29,38.1,21,21,9,10,null,1,1,"no","C/C","No",1,80.12,"XP_015838527.1:c.[221G>C]; XP_008200948.1:c.[221G>C]","XP_015838527.1:p.[Ser74Thr]; XP_008200948.1:p.[Ser74Thr]","LOC103315046",103315046,null,"103315046 [Gene Symbol: LOC103315046] [Locus Tag: TcasGA2_TC004945] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315046] [Gene Type: protein-coding]","LOC103315046; TcasGA2_TC004945"]
[101,"NC_007417.3",4949357,"SNV","A","G","Homozygous",20,20,100,1,6,15,0.29,38.75,21,21,9,10,null,1,1,"no","G/G","No",1,80.09,"XP_015838527.1:c.[229A>G]; XP_008200948.1:c.[229A>G]","XP_015838527.1:p.[Thr77Ala]; XP_008200948.1:p.[Thr77Ala]","LOC103315046",103315046,null,"103315046 [Gene Symbol: LOC103315046] [Locus Tag: TcasGA2_TC004945] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315046] [Gene Type: protein-coding]","LOC103315046; TcasGA2_TC004945"]
[102,"NC_007417.3",4993462,"SNV","G","A","Heterozygous",7,25,28,1,7,2,0.22,39.71,9,28,6,7,1.66,0.18,0.93,"no","A/G","No",1,32.38,"XP_008200957.1:c.1654G>A","XP_008200957.1:p.Asp552Asn","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[103,"NC_007417.3",4993472,"SNV","C","T","Heterozygous",7,26,26.92,1,7,3,0.3,38.14,10,32,7,7,-0.58,0.36,0.97,"no","C/T","No",1,29.48,"XP_008200957.1:c.1664C>T","XP_008200957.1:p.Thr555Ile","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[104,"NC_007417.3",4993520,"SNV","A","T","Heterozygous",11,33,33.33,1,6,6,0.5,40.09,12,34,8,10,2.58,0.61,0.96,"no","A/T","No",1,61.09,"XP_008200957.1:c.1712A>T","XP_008200957.1:p.Asn571Ile","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[105,"NC_007417.3",4993538,"SNV","C","T","Heterozygous",10,30,33.33,1,5,5,0.5,39,10,30,7,9,0.77,0.23,0.88,"no","C/T","No",1,56.49,"XP_008200957.1:c.1730C>T","XP_008200957.1:p.Thr577Ile","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[106,"NC_007417.3",4993575,"SNV","G","C","Heterozygous",6,24,25,0.99,3,3,0.5,36.33,6,25,4,5,-1.37,0.67,0.81,"no","C/G","No",1,22.21,"XP_008200957.1:c.1767G>C","XP_008200957.1:p.Arg589Ser","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[107,"NC_007417.3",4993583,"SNV","C","T","Heterozygous",5,23,21.74,0.95,2,3,0.4,36.6,5,24,4,4,-1.42,0.92,0.95,"no","C/T","No",1,12.7,"XP_008200957.1:c.1775C>T","XP_008200957.1:p.Ser592Leu","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[108,"NC_007417.3",4993634,"SNV","G","A","Heterozygous",6,24,25,0.99,4,2,0.33,40,6,24,5,3,1.1,0.22,0.86,"no","A/G","No",1,22.47,"XP_008200957.1:c.1826G>A","XP_008200957.1:p.Arg609His","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[109,"NC_007417.3",4993640,"SNV","A","C","Heterozygous",6,22,27.27,1,4,2,0.33,39.83,6,22,5,3,1.36,0.16,0.94,"no","A/C","No",1,28.65,"XP_008200957.1:c.1832A>C","XP_008200957.1:p.Asn611Thr","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[110,"NC_007417.3",4993665,"SNV","G","T","Heterozygous",9,26,34.62,1,9,0,0,39.67,9,28,5,6,1.05,0.08,0.17,"no","G/T","No",1,51.55,"XP_008200957.1:c.1857G>T","XP_008200957.1:p.Leu619Phe","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[111,"NC_007417.3",4993677,"SNV","G","T","Homozygous",27,27,100,1,20,11,0.35,38.56,31,31,17,19,null,1,1,"no","T/T","No",1,102.75,"XP_008200957.1:c.1869G>T","XP_008200957.1:p.Glu623Asp","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[112,"NC_007417.3",5326665,"SNV","C","G","Homozygous",27,27,100,1,16,14,0.47,38.74,30,30,11,18,null,1,1,"no","G/G","No",1,101.16,"XP_008200967.1:c.1118C>G","XP_008200967.1:p.Ala373Gly","LOC658845",658845,null,"658845 [Gene Symbol: LOC658845] [Locus Tag: TcasGA2_TC004966] [Chromosome: LG2] [Map Location: ] [Description: saccharopine dehydrogenase-like oxidoreductase] [Gene Type: protein-coding]","TcasGA2_TC004966; LOC658845"]
[113,"NC_007417.3",5843689,"SNV","G","C","Homozygous",23,23,100,1,14,9,0.39,37.43,23,23,15,14,null,1,1,"no","C/C","No",1,89.14,"XP_015840675.1:c.[1205G>C]; XP_015840663.1:c.[1032+773C>G]; XP_015840664.1:c.[1037+410C>G]","XP_015840675.1:p.Arg402Pro","LOC103315127, LOC100142296","103315127 , 100142296",null,"103315127 [Gene Symbol: LOC103315127] [Locus Tag: TcasGA2_TC000761] [Chromosome: LG2] [Map Location: ] [Description: regulator of hypoxia-inducible factor 1] [Gene Type: protein-coding] || 100142296 [Gene Symbol: LOC100142296] [Locus Tag: TcasGA2_TC000801] [Chromosome: LG2] [Map Location: ] [Description: RNA polymerase II-associated factor 1 homolog] [Gene Type: protein-coding]","LOC103315127; TcasGA2_TC000761 || TcasGA2_TC000801; LOC100142296"]
[114,"NC_007417.3",5912038,"SNV","T","A","Homozygous",21,21,100,1,7,19,0.27,38.71,26,26,14,12,null,1,1,"no","A/A","No",1,84.69,"XP_008201329.1:c.31A>T","XP_008201329.1:p.Ile11Phe","LOC103315156",103315156,null,"103315156 [Gene Symbol: LOC103315156] [Locus Tag: TcasGA2_TC032050] [Chromosome: LG2] [Map Location: ] [Description: leucine-rich repeat-containing G-protein coupled receptor 4-like] [Gene Type: protein-coding]","LOC103315156; TcasGA2_TC032050"]
[115,"NC_007417.3",6610230,"SNV","A","G","Homozygous",20,20,100,1,4,17,0.19,38.65,21,21,12,14,null,1,1,"no","G/G","No",1,80.09,"XP_008201369.1:c.640A>G","XP_008201369.1:p.Asn214Asp","LOC663324",663324,null,"663324 [Gene Symbol: LOC663324] [Locus Tag: TcasGA2_TC030989] [Chromosome: LG2] [Map Location: ] [Description: anosmin-1] [Gene Type: protein-coding]","TcasGA2_TC030989; LOC663324"]
[116,"NC_007417.3",6615915,"SNV","T","C","Homozygous",20,20,100,1,6,16,0.27,39.85,22,22,15,11,null,1,1,"no","C/C","No",1,80.12,"XP_008201370.1:c.349T>C","XP_008201370.1:p.Ser117Pro","LOC103315168",103315168,null,"103315168 [Gene Symbol: LOC103315168] [Locus Tag: TcasGA2_TC000840] [Chromosome: LG2] [Map Location: ] [Description: zinc finger protein 557] [Gene Type: protein-coding]","LOC103315168; TcasGA2_TC000840"]
[117,"NC_007417.3",6719990,"SNV","A","G","Homozygous",22,22,100,1,9,20,0.31,35.27,29,29,8,9,null,1,1,"no","G/G","No",1,86.11,"XP_015840913.1:c.115T>C","XP_015840913.1:p.Ser39Pro","LOC107399279",107399279,null,"107399279 [Gene Symbol: LOC107399279] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: odorant receptor Or1-like] [Gene Type: protein-coding]","LOC107399279"]
[118,"NC_007417.3",6859990,"SNV","C","T","Homozygous",21,21,100,1,19,3,0.14,36.48,22,22,9,15,null,1,1,"no","T/T","No",1,84.7,"XP_015840479.1:c.[441+8526C>T]; XP_008201382.2:c.[441+8526C>T]; XP_015839833.1:c.[829G>A]; XP_015840483.1:c.[441+8526C>T]; XP_015840482.1:c.[441+8526C>T]; XP_015840480.1:c.[441+8526C>T]","XP_015839833.1:p.Gly277Ser","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[119,"NC_007417.3",6867131,"SNV","A","G","Homozygous",20,20,100,1,10,12,0.45,36.7,22,22,10,10,null,1,1,"no","G/G","No",1,80.09,"XP_015840480.1:c.[441+15667A>G]; XP_015840483.1:c.[441+15667A>G]; XP_015839837.1:c.[412T>C]; XP_015840479.1:c.[441+15667A>G]; XP_008201382.2:c.[441+15667A>G]; XP_015840482.1:c.[441+15667A>G]","XP_015839837.1:p.Ser138Pro","LOC663521, LOC103315172","663521 , 103315172",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 103315172 [Gene Symbol: LOC103315172] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: larval cuticle protein A2B-like] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || LOC103315172"]
[120,"NC_007417.3",7151947,"SNV","A","G","Homozygous",21,21,100,1,8,14,0.36,36.57,22,22,11,13,null,1,1,"no","G/G","No",1,83.1,"XP_015840449.1:c.[40-21552T>C]; XP_008201399.1:c.[170A>G]","XP_008201399.1:p.Lys57Arg","LOC663672, LOC103315177","663672 , 103315177",null,"663672 [Gene Symbol: LOC663672] [Locus Tag: TcasGA2_TC000706] [Chromosome: LG2] [Map Location: ] [Description: protein sprint] [Gene Type: protein-coding] || 103315177 [Gene Symbol: LOC103315177] [Locus Tag: TcasGA2_TC000859] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315177] [Gene Type: protein-coding]","TcasGA2_TC000706; LOC663672 || TcasGA2_TC000859; LOC103315177"]
[121,"NC_007417.3",7586759,"SNV","T","C","Heterozygous",11,25,44,1,5,6,0.45,37.27,11,25,6,6,-1.64,0.7,0.74,"no","C/T","No",1,84.58,"XP_008201416.1:c.[290A>G]; XP_975007.2:c.[290A>G]","XP_008201416.1:p.[Lys97Arg]; XP_975007.2:p.[Lys97Arg]","LOC663884",663884,null,"663884 [Gene Symbol: LOC663884] [Locus Tag: TcasGA2_TC000688] [Chromosome: LG2] [Map Location: ] [Description: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic] [Gene Type: protein-coding]","LOC663884; TcasGA2_TC000688"]
[122,"NC_007417.3",7587045,"SNV","G","C","Heterozygous",11,20,55,1,6,8,0.43,37.73,14,25,9,9,-0.65,0.69,0.99,"no","C/G","No",1,71.64,"XP_008201416.1:c.[148C>G]; XP_975007.2:c.[148C>G]","XP_008201416.1:p.[His50Asp]; XP_975007.2:p.[His50Asp]","LOC663884",663884,null,"663884 [Gene Symbol: LOC663884] [Locus Tag: TcasGA2_TC000688] [Chromosome: LG2] [Map Location: ] [Description: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic] [Gene Type: protein-coding]","LOC663884; TcasGA2_TC000688"]
[123,"NC_007417.3","7638473..7638474","MNV","AA","CG","Heterozygous",14,21,66.67,1,3,14,0.18,37.14,17,24,12,13,-1.69,0.61,0.7,"no","complex","No",1,200,"XP_008201430.1:c.[344_345delTTinsCG]; XP_008201431.1:c.[344_345delTTinsCG]","XP_008201430.1:p.[Ile115Thr]; XP_008201431.1:p.[Ile115Thr]","LOC664053",664053,null,"664053 [Gene Symbol: LOC664053] [Locus Tag: TcasGA2_TC000677] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase SHPRH] [Gene Type: protein-coding]","LOC664053; TcasGA2_TC000677"]
[124,"NC_007417.3","7801375..7801376","MNV","TA","AG","Heterozygous",19,24,79.17,1,5,15,0.25,37.86,20,26,9,11,null,0.86,1,"no","complex","No",1,200,"XP_015839909.1:c.1354_1355delTAinsCT","XP_015839909.1:p.Tyr452Leu","LOC664192",664192,null,"664192 [Gene Symbol: LOC664192] [Locus Tag: TcasGA2_TC000665] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC664192] [Gene Type: protein-coding]","TcasGA2_TC000665; LOC664192"]
[125,"NC_007417.3",7801376,"SNV","A","G","Heterozygous",5,24,20.83,1,2,4,0.33,38.98,6,26,5,5,null,0.33,0.96,"no","complex","No",1,200,"XP_015839909.1:c.1354T>C","XP_015839909.1:p.Tyr452His","LOC664192",664192,null,"664192 [Gene Symbol: LOC664192] [Locus Tag: TcasGA2_TC000665] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC664192] [Gene Type: protein-coding]","TcasGA2_TC000665; LOC664192"]
[126,"NC_007417.3",7809080,"SNV","A","G","Heterozygous",16,21,76.19,0.98,12,7,0.37,37.81,19,28,9,12,0.5,0.94,1,"no","A/G","No",1,18.15,"XP_008201279.1:c.10A>G","XP_008201279.1:p.Ile4Val","LOC664210",664210,null,"664210 [Gene Symbol: LOC664210] [Locus Tag: TcasGA2_TC000887] [Chromosome: LG2] [Map Location: ] [Description: retinoid-inducible serine carboxypeptidase] [Gene Type: protein-coding]","LOC664210; TcasGA2_TC000887"]
[127,"NC_007417.3",8510453,"SNV","A","G","Heterozygous",16,21,76.19,0.98,10,9,0.47,36.25,19,24,10,15,1.16,1,1,"no","A/G","No",1,18.19,"XP_008201248.1:c.[814A>G]; NP_001038090.1:c.[805A>G]","XP_008201248.1:p.[Thr272Ala]; NP_001038090.1:p.[Thr269Ala]","Zen2",652932,"zerknullt-related","652932 [Gene Symbol: Zen2] [Locus Tag: TcasGA2_TC000922] [Chromosome: LG2] [Map Location: ] [Description: zerknullt-related] [Gene Type: protein-coding]","TcasGA2_TC000922; Zen2; Tczen2; zen-2"]
[128,"NC_007417.3",8647247,"Deletion","C","-","Homozygous",23,23,100,1,7,17,0.29,36.57,24,24,11,11,null,1,1,"no","-/-","No",1,99.74,"XP_008201469.1:c.1481delC","XP_008201469.1:p.Arg496fs","LOC664379",664379,null,"664379 [Gene Symbol: LOC664379] [Locus Tag: TcasGA2_TC000935] [Chromosome: LG2] [Map Location: ] [Description: high-affinity choline transporter 1] [Gene Type: protein-coding]","LOC664379; TcasGA2_TC000935"]
[129,"NC_007417.3",8849554,"SNV","G","T","Heterozygous",9,20,45,1,3,8,0.27,36.56,11,24,5,5,-1.94,0.25,1,"no","G/T","No",1,68.35,"XP_008195282.1:c.501C>A","XP_008195282.1:p.Asp167Glu","LOC655255",655255,null,"655255 [Gene Symbol: LOC655255] [Locus Tag: TcasGA2_TC000631] [Chromosome: LG2] [Map Location: ] [Description: origin recognition complex subunit 2] [Gene Type: protein-coding]","TcasGA2_TC000631; LOC655255"]
[130,"NC_007417.3",8849632,"SNV","G","T","Heterozygous",11,21,52.38,1,4,7,0.36,37.36,11,23,4,7,0.35,0.17,0.99,"no","G/T","No",1,81.83,"XP_008195282.1:c.423C>A","XP_008195282.1:p.Asp141Glu","LOC655255",655255,null,"655255 [Gene Symbol: LOC655255] [Locus Tag: TcasGA2_TC000631] [Chromosome: LG2] [Map Location: ] [Description: origin recognition complex subunit 2] [Gene Type: protein-coding]","TcasGA2_TC000631; LOC655255"]
[131,"NC_007417.3",8884951,"SNV","T","C","Heterozygous",10,20,50,1,1,10,0.09,37.4,11,22,5,7,-0.11,0.26,0.36,"no","C/T","No",1,82.02,"XP_967567.1:c.496A>G","XP_967567.1:p.Thr166Ala","LOC655917",655917,null,"655917 [Gene Symbol: LOC655917] [Locus Tag: TcasGA2_TC000627] [Chromosome: LG2] [Map Location: ] [Description: cysteine and histidine-rich domain-containing protein] [Gene Type: protein-coding]","TcasGA2_TC000627; LOC655917"]
[132,"NC_007417.3",8886099,"SNV","C","T","Heterozygous",10,21,47.62,1,8,2,0.2,39.2,10,23,6,8,1.48,0.74,0.98,"no","C/T","No",1,81.46,"XP_967646.1:c.2042G>A","XP_967646.1:p.Arg681Lys","LOC655996",655996,null,"655996 [Gene Symbol: LOC655996] [Locus Tag: TcasGA2_TC000626] [Chromosome: LG2] [Map Location: ] [Description: molybdenum cofactor sulfurase 1] [Gene Type: protein-coding]","TcasGA2_TC000626; LOC655996"]
[133,"NC_007417.3",8900326,"SNV","C","T","Heterozygous",11,20,55,1,6,6,0.5,37.36,12,21,7,9,-1.44,0.84,0.99,"no","C/T","No",1,72.94,"XP_967720.2:c.[1529G>A]; XP_015840574.1:c.[1529G>A]; XP_015840573.1:c.[1529G>A]","XP_967720.2:p.[Arg510Lys]; XP_015840574.1:p.[Arg510Lys]; XP_015840573.1:p.[Arg510Lys]","LOC656076",656076,null,"656076 [Gene Symbol: LOC656076] [Locus Tag: TcasGA2_TC000625] [Chromosome: LG2] [Map Location: ] [Description: chaoptin] [Gene Type: protein-coding]","LOC656076; TcasGA2_TC000625"]
[134,"NC_007417.3",9029150,"SNV","G","T","Heterozygous",8,28,28.57,1,4,7,0.36,35.62,11,31,5,4,-2.11,0.23,0.74,"no","G/T","No",1,33.3,"XP_008195501.1:c.[3958G>T]; XP_015840622.1:c.[3958G>T]; XP_008195506.1:c.[3958G>T]","XP_008195501.1:p.[Ala1320Ser]; XP_015840622.1:p.[Ala1320Ser]; XP_008195506.1:p.[Ala1320Ser]","LOC657865",657865,null,"657865 [Gene Symbol: LOC657865] [Locus Tag: TcasGA2_TC000971] [Chromosome: LG2] [Map Location: ] [Description: probable E3 ubiquitin-protein ligase HERC1] [Gene Type: protein-coding]","TcasGA2_TC000971; LOC657865"]
[135,"NC_007417.3",9085115,"SNV","G","C","Heterozygous",9,21,42.86,1,6,4,0.4,37.67,10,23,8,8,0,0.82,0.95,"no","C/G","No",1,68.88,"XP_969760.1:c.1439G>C","XP_969760.1:p.Gly480Ala","LOC658266",658266,null,"658266 [Gene Symbol: LOC658266] [Locus Tag: TcasGA2_TC000974] [Chromosome: LG2] [Map Location: ] [Description: protein NRDE2 homolog] [Gene Type: protein-coding]","LOC658266; TcasGA2_TC000974"]
[136,"NC_007417.3",9091068,"SNV","T","G","Heterozygous",11,21,52.38,1,6,8,0.43,38.45,14,24,7,8,0.14,0.26,0.99,"no","G/T","No",1,78.23,"XP_008201029.1:c.1075T>G","XP_008201029.1:p.Ser359Ala","LOC658408",658408,null,"658408 [Gene Symbol: LOC658408] [Locus Tag: TcasGA2_TC000975] [Chromosome: LG2] [Map Location: ] [Description: dolichol kinase] [Gene Type: protein-coding]","LOC658408; TcasGA2_TC000975"]
[137,"NC_007417.3","9099736..9099737","MNV","CC","TT","Heterozygous",10,23,43.48,1,10,2,0.17,38.85,12,25,6,8,0.53,0.57,0.95,"no","complex","No",1,200,"XP_970105.1:c.1587_1588delGGinsAA","XP_970105.1:p.Val530Ile","LOC658647",658647,null,"658647 [Gene Symbol: LOC658647] [Locus Tag: TcasGA2_TC000607] [Chromosome: LG2] [Map Location: ] [Description: MYCBP-associated protein] [Gene Type: protein-coding]","LOC658647; TcasGA2_TC000607"]
[138,"NC_007417.3","9099820..9099821","MNV","TC","CT","Homozygous",20,20,100,1,12,12,0.5,38.5,24,24,14,17,null,1,1,"no","CT/CT","No",1,200,"XP_970105.1:c.1503_1504delGAinsAG","XP_970105.1:p.Thr502Ala","LOC658647",658647,null,"658647 [Gene Symbol: LOC658647] [Locus Tag: TcasGA2_TC000607] [Chromosome: LG2] [Map Location: ] [Description: MYCBP-associated protein] [Gene Type: protein-coding]","LOC658647; TcasGA2_TC000607"]
[139,"NC_007417.3",9100288,"SNV","G","T","Homozygous",19,20,95,1,9,12,0.43,38.89,21,22,9,14,null,1,1,"no","T/T","No",1,49.67,"XP_970105.1:c.1036C>A","XP_970105.1:p.Gln346Lys","LOC658647",658647,null,"658647 [Gene Symbol: LOC658647] [Locus Tag: TcasGA2_TC000607] [Chromosome: LG2] [Map Location: ] [Description: MYCBP-associated protein] [Gene Type: protein-coding]","LOC658647; TcasGA2_TC000607"]
[140,"NC_007417.3",9110862,"SNV","G","C","Heterozygous",22,28,78.57,0.93,16,6,0.27,38.95,22,30,10,14,-0.36,0.46,0.82,"no","C/G","No",1,11.41,"XP_015840568.1:c.[8303C>G]; XP_015840569.1:c.[8252C>G]; XP_015840570.1:c.[8240C>G]; XP_015840566.1:c.[8402C>G]; XP_015840567.1:c.[8363C>G]; XP_015840565.1:c.[8402C>G]; XP_015840564.1:c.[8414C>G]","XP_015840568.1:p.[Thr2768Ser]; XP_015840569.1:p.[Thr2751Ser]; XP_015840570.1:p.[Thr2747Ser]; XP_015840566.1:p.[Thr2801Ser]; XP_015840567.1:p.[Thr2788Ser]; XP_015840565.1:p.[Thr2801Ser]; XP_015840564.1:p.[Thr2805Ser]","LOC658776",658776,null,"658776 [Gene Symbol: LOC658776] [Locus Tag: TcasGA2_TC000606] [Chromosome: LG2] [Map Location: ] [Description: histone-lysine N-methyltransferase 2C] [Gene Type: protein-coding]","LOC658776; TcasGA2_TC000606"]
[141,"NC_007417.3","9111303..9111308","Deletion","TGCTGT","-","Heterozygous",9,23,39.13,1,0,9,0,37.78,9,24,5,4,1.3,0.12,0.34,"no","complex","No",1,200,"XP_015840569.1:c.[7806_7811delACAGCA]; XP_015840568.1:c.[7857_7862delACAGCA]; XP_015840570.1:c.[7794_7799delACAGCA]; XP_015840565.1:c.[7956_7961delACAGCA]; XP_015840564.1:c.[7968_7973delACAGCA]; XP_015840566.1:c.[7956_7961delACAGCA]; XP_015840567.1:c.[7917_7922delACAGCA]","XP_015840569.1:p.[Gln2609_Gln2610del]; XP_015840568.1:p.[Gln2626_Gln2627del]; XP_015840570.1:p.[Gln2605_Gln2606del]; XP_015840565.1:p.[Gln2659_Gln2660del]; XP_015840564.1:p.[Gln2663_Gln2664del]; XP_015840566.1:p.[Gln2659_Gln2660del]; XP_015840567.1:p.[Gln2646_Gln2647del]","LOC658776",658776,null,"658776 [Gene Symbol: LOC658776] [Locus Tag: TcasGA2_TC000606] [Chromosome: LG2] [Map Location: ] [Description: histone-lysine N-methyltransferase 2C] [Gene Type: protein-coding]","LOC658776; TcasGA2_TC000606"]
[142,"NC_007417.3",9305300,"SNV","T","C","Heterozygous",8,28,28.57,1,1,8,0.11,37.62,9,31,4,5,-0.46,0.3,0.27,"no","C/T","No",1,37.87,"XP_971263.2:c.1156A>G","XP_971263.2:p.Thr386Ala","LOC659904",659904,null,"659904 [Gene Symbol: LOC659904] [Locus Tag: TcasGA2_TC000592] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC659904] [Gene Type: protein-coding]","TcasGA2_TC000592; LOC659904"]
[143,"NC_007417.3",9305304,"SNV","T","C","Heterozygous",6,26,23.08,0.98,1,6,0.14,38.83,7,29,3,4,0.61,0.21,0.53,"no","C/T","No",1,18.07,"XP_971263.2:c.1152A>G","XP_971263.2:p.Ile384Met","LOC659904",659904,null,"659904 [Gene Symbol: LOC659904] [Locus Tag: TcasGA2_TC000592] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC659904] [Gene Type: protein-coding]","TcasGA2_TC000592; LOC659904"]
[144,"NC_007417.3",9316803,"SNV","C","T","Heterozygous",6,22,27.27,1,6,0,0,37.5,6,22,2,6,-1,0.33,0.7,"no","C/T","No",1,27.96,"XP_015840684.1:c.[2764G>A]; XP_008201053.1:c.[2764G>A]; XP_015840685.1:c.[2764G>A]; XP_971386.1:c.[2761G>A]; XP_008201052.1:c.[2764G>A]","XP_015840684.1:p.[Val922Ile]; XP_008201053.1:p.[Val922Ile]; XP_015840685.1:p.[Val922Ile]; XP_971386.1:p.[Val921Ile]; XP_008201052.1:p.[Val922Ile]","LOC660029",660029,null,"660029 [Gene Symbol: LOC660029] [Locus Tag: TcasGA2_TC000591] [Chromosome: LG2] [Map Location: ] [Description: methyl-CpG-binding domain protein 5] [Gene Type: protein-coding]","LOC660029; TcasGA2_TC000591"]
[145,"NC_007417.3",9341892,"SNV","C","A","Homozygous",20,24,83.33,0.64,8,18,0.31,37.55,26,30,12,17,-0.66,0.96,1,"no","A/A","No",1,4.43,"XP_971446.1:c.810G>T","XP_971446.1:p.Gln270His","LOC660093",660093,null,"660093 [Gene Symbol: LOC660093] [Locus Tag: TcasGA2_TC000590] [Chromosome: LG2] [Map Location: ] [Description: dnaJ homolog subfamily A member 1] [Gene Type: protein-coding]","TcasGA2_TC000590; LOC660093"]
[146,"NC_007417.3",9359927,"SNV","T","A","Homozygous",22,22,100,1,16,9,0.36,36.91,25,25,11,15,null,1,1,"no","A/A","No",1,87.71,"XP_971895.2:c.76T>A","XP_971895.2:p.Tyr26Asn","LOC660584",660584,null,"660584 [Gene Symbol: LOC660584] [Locus Tag: TcasGA2_TC000987] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC660584] [Gene Type: protein-coding]","TcasGA2_TC000987; LOC660584"]
[147,"NC_007417.3",9380095,"SNV","G","T","Homozygous",20,22,90.91,0.99,9,15,0.38,37.3,24,26,11,10,null,0.99,1,"no","T/T","No",1,20.34,"XP_008201008.2:c.6079C>A","XP_008201008.2:p.His2027Asn","LOC100142412",100142412,null,"100142412 [Gene Symbol: LOC100142412] [Locus Tag: TcasGA2_TC000586] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: vacuolar protein sorting-associated protein 13A-like] [Gene Type: protein-coding]","TcasGA2_TC000586; LOC100142412"]
[148,"NC_007417.3",9474417,"SNV","T","G","Heterozygous",9,21,42.86,1,2,7,0.22,38.56,9,23,4,8,1.85,0.42,0.44,"no","G/T","No",1,69.6,"XP_972413.1:c.[190T>G]; XP_008201071.1:c.[124T>G]","XP_972413.1:p.[Ser64Ala]; XP_008201071.1:p.[Ser42Ala]","LOC661139",661139,null,"661139 [Gene Symbol: LOC661139] [Locus Tag: TcasGA2_TC000992] [Chromosome: LG2] [Map Location: ] [Description: succinate dehydrogenase cytochrome b560 subunit, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC000992; LOC661139"]
[149,"NC_007417.3",9489854,"SNV","G","A","Homozygous",22,22,100,1,8,16,0.33,36.41,24,24,11,15,null,1,1,"no","A/A","No",1,87.71,"XP_015840791.1:c.[839G>A]; XP_015840790.1:c.[800G>A]; XP_008201075.1:c.[839G>A]; XP_015840788.1:c.[800G>A]; XP_015840792.1:c.[800G>A]; XP_015840789.1:c.[800G>A]; XP_008201074.1:c.[839G>A]; XP_008201076.1:c.[839G>A]; XP_015840793.1:c.[800G>A]","XP_015840791.1:p.[Gly280Asp]; XP_015840790.1:p.[Gly267Asp]; XP_008201075.1:p.[Gly280Asp]; XP_015840788.1:p.[Gly267Asp]; XP_015840792.1:p.[Gly267Asp]; XP_015840789.1:p.[Gly267Asp]; XP_008201074.1:p.[Gly280Asp]; XP_008201076.1:p.[Gly280Asp]; XP_015840793.1:p.[Gly267Asp]","LOC100141942",100141942,null,"100141942 [Gene Symbol: LOC100141942] [Locus Tag: TcasGA2_TC000995] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC100141942] [Gene Type: protein-coding]","TcasGA2_TC000995; LOC100141942"]
[150,"NC_007417.3",9619261,"SNV","C","T","Homozygous",26,26,100,1,6,21,0.22,39.31,27,27,12,14,null,1,1,"no","T/T","No",1,99.74,"XP_008201097.1:c.2579C>T","XP_008201097.1:p.Thr860Ile","LOC661669",661669,null,"661669 [Gene Symbol: LOC661669] [Locus Tag: TcasGA2_TC001001] [Chromosome: LG2] [Map Location: ] [Description: microtubule-associated protein futsch] [Gene Type: protein-coding]","LOC661669; TcasGA2_TC001001"]
[151,"NC_007417.3","9631309..9631310","MNV","CT","GC","Homozygous",25,25,100,1,14,12,0.46,38.08,26,26,11,22,null,1,1,"no","GC/GC","No",1,200,"XP_015840516.1:c.[123_124delAGinsGC]; XP_008201098.1:c.[123_124delAGinsGC]; XP_008201103.1:c.[72_73delAGinsGC]; XP_015840517.1:c.[123_124delAGinsGC]; XP_008201099.1:c.[72_73delAGinsGC]","XP_015840516.1:p.[Ala42Pro]; XP_008201098.1:p.[Ala42Pro]; XP_008201103.1:p.[Ala25Pro]; XP_015840517.1:p.[Ala42Pro]; XP_008201099.1:p.[Ala25Pro]","LOC661710",661710,null,"661710 [Gene Symbol: LOC661710] [Locus Tag: TcasGA2_TC000571] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized family 31 glucosidase KIAA1161] [Gene Type: protein-coding]","LOC661710; TcasGA2_TC000571"]
[152,"NC_007417.3",9915858,"SNV","A","G","Heterozygous",6,20,30,1,1,5,0.17,39.33,6,20,4,4,1.69,0.98,1,"no","A/G","No",1,34.52,"XP_008201125.1:c.[1324A>G]; XP_008201126.1:c.[991-789A>G]","XP_008201125.1:p.Ile442Val","LOC662787, LOC103315090","662787 , 103315090",null,"662787 [Gene Symbol: LOC662787] [Locus Tag: TcasGA2_TC030770] [Chromosome: LG2] [Map Location: ] [Description: lysophospholipid acyltransferase 1] [Gene Type: protein-coding] || 103315090 [Gene Symbol: LOC103315090] [Locus Tag: TcasGA2_TC030746] [Chromosome: LG2] [Map Location: ] [Description: IQ and ubiquitin-like domain-containing protein] [Gene Type: protein-coding]","TcasGA2_TC030770; LOC662787 || LOC103315090; TcasGA2_TC030746"]
[153,"NC_007417.3",9925987,"SNV","T","C","Homozygous",26,26,100,1,19,12,0.39,37.96,31,31,17,17,null,1,1,"no","C/C","No",1,98.17,"XP_015839940.1:c.1409A>G","XP_015839940.1:p.Asn470Ser","LOC661704",661704,null,"661704 [Gene Symbol: LOC661704] [Locus Tag: TcasGA2_TC000547] [Chromosome: LG2] [Map Location: ] [Description: transmembrane protease serine 9] [Gene Type: protein-coding]","P13; LOC661704; TcasGA2_TC000547; H14"]
[154,"NC_007417.3",9926537,"SNV","G","A","Homozygous",17,20,85,0.71,8,10,0.44,37.65,18,23,11,10,null,0.9,1,"no","A/A","No",1,5.31,"XP_015839940.1:c.994C>T","XP_015839940.1:p.His332Tyr","LOC661704",661704,null,"661704 [Gene Symbol: LOC661704] [Locus Tag: TcasGA2_TC000547] [Chromosome: LG2] [Map Location: ] [Description: transmembrane protease serine 9] [Gene Type: protein-coding]","P13; LOC661704; TcasGA2_TC000547; H14"]
[155,"NC_007417.3","9928747^9928748","Insertion","-","AA","Heterozygous",17,23,73.91,1,8,10,0.44,37.71,18,25,10,11,0.6,0.99,1,"no","complex","No",1,200,"XP_015839940.1:c.12_13insTT","XP_015839940.1:p.Thr5fs","LOC661704",661704,null,"661704 [Gene Symbol: LOC661704] [Locus Tag: TcasGA2_TC000547] [Chromosome: LG2] [Map Location: ] [Description: transmembrane protease serine 9] [Gene Type: protein-coding]","P13; LOC661704; TcasGA2_TC000547; H14"]
[156,"NC_007417.3",9944898,"SNV","C","T","Heterozygous",14,20,70,1,10,8,0.44,38.79,18,24,9,10,0.21,0.79,0.99,"no","C/T","No",1,34.67,"XP_015840576.1:c.[2702C>T]; XP_015840577.1:c.[2702C>T]; XP_015840575.1:c.[2702C>T]","XP_015840576.1:p.[Ala901Val]; XP_015840577.1:p.[Ala901Val]; XP_015840575.1:p.[Ala901Val]","LOC100141648",100141648,null,"100141648 [Gene Symbol: LOC100141648] [Locus Tag: ] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: uncharacterized LOC100141648] [Gene Type: protein-coding]","LOC100141648"]
[157,"NC_007417.3",9944940,"SNV","T","A","Heterozygous",15,23,65.22,1,5,12,0.29,39.73,17,30,10,11,1.74,0.52,0.91,"no","A/T","No",1,50.7,"XP_015840576.1:c.[2744T>A]; XP_015840577.1:c.[2744T>A]; XP_015840575.1:c.[2744T>A]","XP_015840576.1:p.[Phe915Tyr]; XP_015840577.1:p.[Phe915Tyr]; XP_015840575.1:p.[Phe915Tyr]","LOC100141648",100141648,null,"100141648 [Gene Symbol: LOC100141648] [Locus Tag: ] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: uncharacterized LOC100141648] [Gene Type: protein-coding]","LOC100141648"]
[158,"NC_007417.3",9954768,"SNV","G","C","Heterozygous",16,20,80,0.86,5,11,0.31,36.38,16,20,11,11,-0.43,0.72,1,"no","C/G","No",1,8.49,"XP_008201133.1:c.[3092G>C]; XP_008201132.1:c.[3092G>C]; XP_008201131.1:c.[3092G>C]","XP_008201133.1:p.[Ser1031Thr]; XP_008201132.1:p.[Ser1031Thr]; XP_008201131.1:p.[Ser1031Thr]","LOC663113",663113,null,"663113 [Gene Symbol: LOC663113] [Locus Tag: TcasGA2_TC001026] [Chromosome: LG2] [Map Location: ] [Description: receptor-mediated endocytosis protein 6 homolog] [Gene Type: protein-coding]","LOC663113; TcasGA2_TC001026"]
[159,"NC_007417.3",9976496,"SNV","G","A","Heterozygous",6,24,25,0.99,1,5,0.17,34.83,6,32,3,4,-1.07,0.14,0.5,"no","A/G","No",1,22.67,"XP_015840585.1:c.[224+103G>A]; XP_008201019.1:c.[182G>A]","XP_008201019.1:p.Arg61Lys","LOC103315066",103315066,null,"103315066 [Gene Symbol: LOC103315066] [Locus Tag: TcasGA2_TC001028] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315066] [Gene Type: protein-coding]","LOC103315066; TcasGA2_TC001028"]
[160,"NC_007417.3",9976564,"SNV","G","A","Heterozygous",15,30,50,1,8,7,0.47,38.33,15,32,3,7,0.1,0.31,0.77,"no","A/G","No",1,117.79,"XP_015840585.1:c.[225-140G>A]; XP_008201019.1:c.[250G>A]","XP_008201019.1:p.Gly84Ser","LOC103315066",103315066,null,"103315066 [Gene Symbol: LOC103315066] [Locus Tag: TcasGA2_TC001028] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315066] [Gene Type: protein-coding]","LOC103315066; TcasGA2_TC001028"]
[161,"NC_007417.3",9984841,"SNV","A","T","Heterozygous",5,23,21.74,0.97,5,0,0,38.2,5,25,2,2,0.45,0.04,0.19,"no","A/T","No",1,15.31,"XP_001814929.1:c.94A>T","XP_001814929.1:p.Asn32Tyr","LOC100142616",100142616,null,"100142616 [Gene Symbol: LOC100142616] [Locus Tag: TcasGA2_TC001031] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC100142616] [Gene Type: protein-coding]","TcasGA2_TC001031; LOC100142616"]
[162,"NC_007417.3",9984883,"SNV","G","A","Heterozygous",13,21,61.9,1,3,10,0.23,38.38,13,23,6,7,-0.83,0.47,0.63,"no","A/G","No",1,57.27,"XP_001814929.1:c.136G>A","XP_001814929.1:p.Asp46Asn","LOC100142616",100142616,null,"100142616 [Gene Symbol: LOC100142616] [Locus Tag: TcasGA2_TC001031] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC100142616] [Gene Type: protein-coding]","TcasGA2_TC001031; LOC100142616"]
[163,"NC_007417.3",10031586,"SNV","G","A","Homozygous",18,20,90,0.99,9,13,0.41,36.67,22,26,11,16,null,0.98,1,"no","A/A","No",1,20.37,"XP_015840643.1:c.[2827C>T]; XP_015840645.1:c.[2827C>T]; XP_015840642.1:c.[2827C>T]; XP_008201155.1:c.[2827C>T]","XP_015840643.1:p.[Pro943Ser]; XP_015840645.1:p.[Pro943Ser]; XP_015840642.1:p.[Pro943Ser]; XP_008201155.1:p.[Pro943Ser]","LOC663484",663484,null,"663484 [Gene Symbol: LOC663484] [Locus Tag: TcasGA2_TC000538] [Chromosome: LG2] [Map Location: ] [Description: DENN domain-containing protein 4C] [Gene Type: protein-coding]","LOC663484; TcasGA2_TC000538"]
[164,"NC_007417.3",10127512,"SNV","T","C","Heterozygous",5,22,22.73,0.98,3,2,0.4,39,5,26,4,5,2.27,0.14,0.77,"no","C/T","No",1,16.45,"XP_015840286.1:c.5369A>G","XP_015840286.1:p.Asp1790Gly","LOC103315067",103315067,null,"103315067 [Gene Symbol: LOC103315067] [Locus Tag: TcasGA2_TC000532] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315067] [Gene Type: protein-coding]","LOC103315067; TcasGA2_TC000532"]
[165,"NC_007417.3",10129866,"SNV","C","T","Heterozygous",5,23,21.74,0.95,2,3,0.4,38.4,5,23,4,4,-0.3,0.08,0.69,"no","C/T","No",1,12.67,"XP_015840286.1:c.3266G>A","XP_015840286.1:p.Cys1089Tyr","LOC103315067",103315067,null,"103315067 [Gene Symbol: LOC103315067] [Locus Tag: TcasGA2_TC000532] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315067] [Gene Type: protein-coding]","LOC103315067; TcasGA2_TC000532"]
[166,"NC_007417.3","10180194..10180195","MNV","CA","TG","Heterozygous",11,20,55,1,10,1,0.09,39.91,11,23,6,7,3.5,0.22,0.3,"no","complex","No",1,200,"XP_008201022.1:c.[4328_4329delCAinsTG]; XP_015840738.1:c.[4262_4263delCAinsTG]; XP_015840740.1:c.[4328_4329delCAinsTG]; XP_015840739.1:c.[4328_4329delCAinsTG]","XP_008201022.1:p.[Pro1443Leu]; XP_015840738.1:p.[Pro1421Leu]; XP_015840740.1:p.[Pro1443Leu]; XP_015840739.1:p.[Pro1443Leu]","LOC663795",663795,null,"663795 [Gene Symbol: LOC663795] [Locus Tag: TcasGA2_TC001044] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC663795] [Gene Type: protein-coding]","TcasGA2_TC001044; LOC663795"]
[167,"NC_007417.3",10475118,"SNV","G","A","Homozygous",21,21,100,1,14,8,0.36,35.29,22,22,12,15,null,1,1,"no","A/A","No",1,84.7,"XP_015840701.1:c.[3365G>A]; XP_015840700.1:c.[3365G>A]","XP_015840701.1:p.[Arg1122His]; XP_015840700.1:p.[Arg1122His]","LOC664116",664116,null,"664116 [Gene Symbol: LOC664116] [Locus Tag: TcasGA2_TC001065] [Chromosome: LG2] [Map Location: ] [Description: Nance-Horan syndrome protein] [Gene Type: protein-coding]","LOC664116; TcasGA2_TC001065"]
[168,"NC_007417.3","10497371..10497373","Deletion","GAC","-","Homozygous",20,20,100,1,8,15,0.35,35.8,23,23,12,13,null,1,1,"no","-/-","No",1,200,"XP_008201026.1:c.354_356delGAC","XP_008201026.1:p.Thr120del","LOC664148",664148,null,"664148 [Gene Symbol: LOC664148] [Locus Tag: TcasGA2_TC001069] [Chromosome: LG2] [Map Location: ] [Description: dissatisfaction] [Gene Type: protein-coding]","dsf; TcasGA2_TC001069; NR2E4; LOC664148"]
[169,"NC_007417.3","10503914..10503916","Deletion","GAA","-","Homozygous",26,26,100,1,21,6,0.22,38.15,27,27,14,23,null,1,1,"no","-/-","No",1,200,"XP_975277.1:c.1415_1417delTTC","XP_975277.1:p.Leu472del","LOC664171",664171,null,"664171 [Gene Symbol: LOC664171] [Locus Tag: TcasGA2_TC000506] [Chromosome: LG2] [Map Location: ] [Description: chromatin assembly factor 1 subunit B] [Gene Type: protein-coding]","TcasGA2_TC000506; LOC664171"]
[170,"NC_007417.3",10506316,"SNV","T","A","Homozygous",20,20,100,1,11,14,0.44,39.15,25,25,12,13,null,1,1,"no","A/A","No",1,81.69,"XP_008201205.1:c.241T>A","XP_008201205.1:p.Cys81Ser","LOC664178",664178,null,"664178 [Gene Symbol: LOC664178] [Locus Tag: TcasGA2_TC001072] [Chromosome: LG2] [Map Location: ] [Description: anaphase-promoting complex subunit 1] [Gene Type: protein-coding]","LOC664178; shtd; shattered; TcasGA2_TC001072"]
[171,"NC_007417.3",10506329,"SNV","G","A","Homozygous",22,22,100,1,13,14,0.48,38.27,27,27,12,13,null,1,1,"no","A/A","No",1,87.71,"XP_008201205.1:c.254G>A","XP_008201205.1:p.Ser85Asn","LOC664178",664178,null,"664178 [Gene Symbol: LOC664178] [Locus Tag: TcasGA2_TC001072] [Chromosome: LG2] [Map Location: ] [Description: anaphase-promoting complex subunit 1] [Gene Type: protein-coding]","LOC664178; shtd; shattered; TcasGA2_TC001072"]
[172,"NC_007417.3",10514647,"SNV","G","A","Homozygous",23,23,100,1,10,15,0.4,39.09,25,25,15,14,null,1,1,"no","A/A","No",1,90.71,"XP_008201207.1:c.[223+24C>T]; XP_975293.1:c.[223+24C>T]; XP_015840560.1:c.[247C>T]; XP_015840559.1:c.[247C>T]; XP_015840558.1:c.[247C>T]","XP_015840560.1:p.[Pro83Ser]; XP_015840559.1:p.[Pro83Ser]; XP_015840558.1:p.[Pro83Ser]","LOC664187",664187,null,"664187 [Gene Symbol: LOC664187] [Locus Tag: TcasGA2_TC000505] [Chromosome: LG2] [Map Location: ] [Description: importin subunit alpha-5] [Gene Type: protein-coding]","TcasGA2_TC000505; LOC664187"]
[173,"NC_007417.3",10834985,"SNV","A","C","Homozygous",22,22,100,1,16,8,0.33,36.5,24,24,13,17,null,1,1,"no","C/C","No",1,86.13,"XP_008201508.1:c.[1003A>C]; XP_015840836.1:c.[1003A>C]","XP_008201508.1:p.[Ile335Leu]; XP_015840836.1:p.[Ile335Leu]","LOC655505",655505,null,"655505 [Gene Symbol: LOC655505] [Locus Tag: TcasGA2_TC001093] [Chromosome: LG2] [Map Location: ] [Description: poly(ADP-ribose) glycohydrolase ARH3] [Gene Type: protein-coding]","LOC655505; TcasGA2_TC001093"]
[174,"NC_007417.3",10924281,"SNV","A","G","Homozygous",20,20,100,1,6,15,0.29,37.5,21,21,12,15,null,1,1,"no","G/G","No",1,80.09,"XP_008201513.1:c.128T>C","XP_008201513.1:p.Val43Ala","LOC656916",656916,null,"656916 [Gene Symbol: LOC656916] [Locus Tag: TcasGA2_TC000466] [Chromosome: LG2] [Map Location: ] [Description: oxygen-dependent coproporphyrinogen-III oxidase] [Gene Type: protein-coding]","LOC656916; TcasGA2_TC000466"]
[175,"NC_007417.3",11061390,"SNV","C","A","Homozygous",26,26,100,1,11,15,0.42,38.27,26,26,15,20,null,1,1,"no","A/A","No",1,99.74,"NP_001107840.1:c.[4148C>A]; XP_008201496.1:c.[4148C>A]; XP_015839513.1:c.[4148C>A]","NP_001107840.1:p.[Thr1383Asn]; XP_008201496.1:p.[Thr1383Asn]; XP_015839513.1:p.[Thr1383Asn]","Dcr-2",658023,"Dicer-2","658023 [Gene Symbol: Dcr-2] [Locus Tag: TcasGA2_TC001108] [Chromosome: LG2] [Map Location: ] [Description: Dicer-2] [Gene Type: protein-coding]","TcasGA2_TC001108; Dcr-2"]
[176,"NC_007417.3",11897588,"SNV","G","A","Heterozygous",15,20,75,0.99,7,12,0.37,38.27,19,24,8,9,-1.92,0.95,1,"no","A/G","No",1,21.8,"XP_008201601.1:c.[725C>T]; XP_008201600.1:c.[725C>T]","XP_008201601.1:p.[Thr242Met]; XP_008201600.1:p.[Thr242Met]","LOC103315228",103315228,null,"103315228 [Gene Symbol: LOC103315228] [Locus Tag: TcasGA2_TC032188] [Chromosome: LG2] [Map Location: ] [Description: zinc finger protein 532-like] [Gene Type: protein-coding]","TcasGA2_TC032188; LOC103315228"]
[177,"NC_007417.3","11911557..11911558","MNV","CA","GG","Homozygous",25,25,100,1,14,16,0.47,38.33,30,30,15,18,null,1,1,"no","GG/GG","No",1,200,"XP_001814259.1:c.840_841delTGinsCC","XP_001814259.1:p.Glu281Gln","LOC100141689",100141689,null,"100141689 [Gene Symbol: LOC100141689] [Locus Tag: TcasGA2_TC000402] [Chromosome: LG2] [Map Location: ] [Description: ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1] [Gene Type: protein-coding]","LOC100141689; TcasGA2_TC000402"]
[178,"NC_007417.3",11924968,"SNV","T","A","Heterozygous",10,21,47.62,1,2,9,0.18,39.4,11,23,4,7,2.08,0.31,0.75,"no","A/T","No",1,81.42,"XP_015840541.1:c.[6076A>T]; XP_015840548.1:c.[5971A>T]; XP_015840547.1:c.[6076A>T]; XP_015840544.1:c.[6076A>T]; XP_015840545.1:c.[5971A>T]; XP_015840543.1:c.[6076A>T]; XP_015840549.1:c.[6076A>T]; XP_015840546.1:c.[6076A>T]; XP_015840542.1:c.[6076A>T]","XP_015840541.1:p.[Met2026Leu]; XP_015840548.1:p.[Met1991Leu]; XP_015840547.1:p.[Met2026Leu]; XP_015840544.1:p.[Met2026Leu]; XP_015840545.1:p.[Met1991Leu]; XP_015840543.1:p.[Met2026Leu]; XP_015840549.1:p.[Met2026Leu]; XP_015840546.1:p.[Met2026Leu]; XP_015840542.1:p.[Met2026Leu]","LOC662569",662569,null,"662569 [Gene Symbol: LOC662569] [Locus Tag: TcasGA2_TC000401] [Chromosome: LG2] [Map Location: ] [Description: fat-like cadherin-related tumor suppressor homolog] [Gene Type: protein-coding]","LOC662569; FAT; cadherin; TcasGA2_TC000401"]
[179,"NC_007417.3",12009723,"SNV","C","G","Homozygous",23,23,100,1,12,11,0.48,38.35,23,23,13,14,null,1,1,"no","G/G","No",1,89.12,"XP_008201654.1:c.489G>C","XP_008201654.1:p.Glu163Asp","LOC103315244",103315244,null,"103315244 [Gene Symbol: LOC103315244] [Locus Tag: TcasGA2_TC000398] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315244] [Gene Type: protein-coding]","LOC103315244; TcasGA2_TC000398"]
[180,"NC_007417.3",12111081,"SNV","C","T","Homozygous",21,21,100,1,13,10,0.43,37.57,23,23,12,15,null,1,1,"no","T/T","No",1,84.71,"XP_008201607.1:c.203G>A","XP_008201607.1:p.Arg68Lys","LOC662815",662815,null,"662815 [Gene Symbol: LOC662815] [Locus Tag: TcasGA2_TC000395] [Chromosome: LG2] [Map Location: ] [Description: beta-1,4-glucuronyltransferase 1] [Gene Type: protein-coding]","TcasGA2_TC000395; LOC662815"]
[181,"NC_007417.3",12245740,"SNV","T","C","Homozygous",34,34,100,1,21,21,0.5,37.44,42,42,22,27,null,1,1,"no","C/C","No",1,122.24,"XP_001814707.1:c.274A>G","XP_001814707.1:p.Thr92Ala","LOC100142510",100142510,null,"100142510 [Gene Symbol: LOC100142510] [Locus Tag: TcasGA2_TC000380] [Chromosome: LG2] [Map Location: ] [Description: SET and MYND domain-containing protein 5] [Gene Type: protein-coding]","LOC100142510; TcasGA2_TC000380"]
[182,"NC_007417.3",12245812,"SNV","T","C","Homozygous",22,22,100,1,10,13,0.43,35.91,23,23,12,16,null,1,1,"no","C/C","No",1,86.13,"XP_001814707.1:c.202A>G","XP_001814707.1:p.Thr68Ala","LOC100142510",100142510,null,"100142510 [Gene Symbol: LOC100142510] [Locus Tag: TcasGA2_TC000380] [Chromosome: LG2] [Map Location: ] [Description: SET and MYND domain-containing protein 5] [Gene Type: protein-coding]","LOC100142510; TcasGA2_TC000380"]
[183,"NC_007417.3",12247523,"Deletion","T","-","Homozygous",20,20,100,1,12,9,0.43,37.85,21,21,14,15,null,1,1,"no","-/-","No",1,90.71,"XP_001814757.1:c.1delA","XP_001814757.1:p.Met1?","LOC100142108",100142108,null,"100142108 [Gene Symbol: LOC100142108] [Locus Tag: TcasGA2_TC000379] [Chromosome: LG2] [Map Location: ] [Description: transmembrane emp24 domain-containing protein eca] [Gene Type: protein-coding]","TcasGA2_TC000379; LOC100142108"]
[184,"NC_007417.3",12251363,"SNV","T","C","Homozygous",24,24,100,1,15,12,0.44,38.29,27,27,16,16,null,1,1,"no","C/C","No",1,92.15,"XP_008201627.1:c.604A>G","XP_008201627.1:p.Thr202Ala","LOC663431",663431,null,"663431 [Gene Symbol: LOC663431] [Locus Tag: TcasGA2_TC000376] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase RFWD2] [Gene Type: protein-coding]","LOC663431; TcasGA2_TC000376"]
[185,"NC_007417.3",12257751,"SNV","A","G","Homozygous",22,22,100,1,12,12,0.5,37.86,24,24,12,14,null,1,1,"no","G/G","No",1,86.11,"XP_974637.1:c.1307T>C","XP_974637.1:p.Val436Ala","LOC663504",663504,null,"663504 [Gene Symbol: LOC663504] [Locus Tag: TcasGA2_TC000375] [Chromosome: LG2] [Map Location: ] [Description: pre-mRNA-splicing factor Slu7] [Gene Type: protein-coding]","LOC663504; TcasGA2_TC000375"]
[186,"NC_007417.3",12281481,"SNV","C","A","Homozygous",21,21,100,1,17,4,0.19,36.67,21,21,12,13,null,1,1,"no","A/A","No",1,84.7,"XP_015840877.1:c.[2107G>T]; XP_015840881.1:c.[1321G>T]; XP_015840878.1:c.[2107G>T]; XP_015840880.1:c.[2107G>T]; XP_015840879.1:c.[2107G>T]","XP_015840877.1:p.[Ala703Ser]; XP_015840881.1:p.[Ala441Ser]; XP_015840878.1:p.[Ala703Ser]; XP_015840880.1:p.[Ala703Ser]; XP_015840879.1:p.[Ala703Ser]","LOC103315239",103315239,null,"103315239 [Gene Symbol: LOC103315239] [Locus Tag: TcasGA2_TC000368] [Chromosome: LG2] [Map Location: ] [Description: prominin-1-A] [Gene Type: protein-coding]","TcasGA2_TC000368; LOC103315239"]
[187,"NC_007417.3",12386498,"SNV","T","C","Homozygous",21,21,100,1,13,8,0.38,38.24,21,21,7,17,null,1,1,"no","C/C","No",1,83.13,"NP_001280519.1:c.[958T>C]; XP_015839687.1:c.[958T>C]","NP_001280519.1:p.[Ser320Pro]; XP_015839687.1:p.[Ser320Pro]","LOC663905",663905,"inhibitor of apoptosis 2","663905 [Gene Symbol: LOC663905] [Locus Tag: TcasGA2_TC001189] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 2] [Gene Type: protein-coding]","Tiap2; LOC663905; TcasGA2_TC001189"]
[188,"NC_007417.3",12393906,"SNV","G","T","Homozygous",22,22,100,1,7,22,0.24,38.64,29,29,10,12,null,1,1,"no","T/T","No",1,87.71,"XP_008201644.1:c.[768G>T]; XP_008201646.1:c.[747G>T]; XP_008201645.1:c.[747G>T]; XP_975061.1:c.[747G>T]","XP_008201644.1:p.[Gln256His]; XP_008201646.1:p.[Gln249His]; XP_008201645.1:p.[Gln249His]; XP_975061.1:p.[Gln249His]","LOC663941",663941,null,"663941 [Gene Symbol: LOC663941] [Locus Tag: TcasGA2_TC001192] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 1] [Gene Type: protein-coding]","TcasGA2_TC001192; LOC663941; Tiap1"]
[189,"NC_007417.3",12393908,"SNV","G","A","Homozygous",22,22,100,1,7,22,0.24,39.23,29,29,10,12,null,1,1,"no","A/A","No",1,87.71,"XP_008201646.1:c.[749G>A]; XP_008201645.1:c.[749G>A]; XP_975061.1:c.[749G>A]; XP_008201644.1:c.[770G>A]","XP_008201646.1:p.[Gly250Asp]; XP_008201645.1:p.[Gly250Asp]; XP_975061.1:p.[Gly250Asp]; XP_008201644.1:p.[Gly257Asp]","LOC663941",663941,null,"663941 [Gene Symbol: LOC663941] [Locus Tag: TcasGA2_TC001192] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 1] [Gene Type: protein-coding]","TcasGA2_TC001192; LOC663941; Tiap1"]
[190,"NC_007417.3",12572180,"SNV","G","T","Homozygous",24,24,100,1,11,18,0.38,37.79,29,29,14,15,null,1,1,"no","T/T","No",1,93.73,"XP_008201481.1:c.1031G>T","XP_008201481.1:p.Ser344Ile","LOC655180",655180,null,"655180 [Gene Symbol: LOC655180] [Locus Tag: TcasGA2_TC001200] [Chromosome: LG2] [Map Location: ] [Description: TELO2-interacting protein 1 homolog] [Gene Type: protein-coding]","LOC655180; TcasGA2_TC001200"]
[191,"NC_007417.3",12572188,"SNV","G","A","Homozygous",24,24,100,1,11,18,0.38,37.67,29,29,14,15,null,1,1,"no","A/A","No",1,93.72,"XP_008201481.1:c.1039G>A","XP_008201481.1:p.Val347Ile","LOC655180",655180,null,"655180 [Gene Symbol: LOC655180] [Locus Tag: TcasGA2_TC001200] [Chromosome: LG2] [Map Location: ] [Description: TELO2-interacting protein 1 homolog] [Gene Type: protein-coding]","LOC655180; TcasGA2_TC001200"]
[192,"NC_007417.3",12965386,"SNV","A","G","Heterozygous",10,22,45.45,1,8,6,0.43,35.9,14,26,4,6,-1.91,0.96,1,"no","A/G","No",1,80,"XP_968807.1:c.847A>G","XP_968807.1:p.Thr283Ala","LOC657245",657245,null,"657245 [Gene Symbol: LOC657245] [Locus Tag: TcasGA2_TC001222] [Chromosome: LG2] [Map Location: ] [Description: corticotropin-releasing factor receptor 2] [Gene Type: protein-coding]","TcasGA2_TC001222; LOC657245"]
[193,"NC_007417.3",12965742,"SNV","A","G","Heterozygous",7,20,35,1,4,3,0.43,40.14,7,20,3,3,1.55,0.56,0.99,"no","A/G","No",1,47.28,"XP_968807.1:c.1161A>G","XP_968807.1:p.Ile387Met","LOC657245",657245,null,"657245 [Gene Symbol: LOC657245] [Locus Tag: TcasGA2_TC001222] [Chromosome: LG2] [Map Location: ] [Description: corticotropin-releasing factor receptor 2] [Gene Type: protein-coding]","TcasGA2_TC001222; LOC657245"]
[194,"NC_007417.3",12965840,"SNV","G","A","Heterozygous",5,20,25,0.99,0,5,0,40.4,5,22,3,4,2.05,0.37,0.43,"no","A/G","No",1,20.93,"XP_968807.1:c.1214G>A","XP_968807.1:p.Arg405Lys","LOC657245",657245,null,"657245 [Gene Symbol: LOC657245] [Locus Tag: TcasGA2_TC001222] [Chromosome: LG2] [Map Location: ] [Description: corticotropin-releasing factor receptor 2] [Gene Type: protein-coding]","TcasGA2_TC001222; LOC657245"]
[195,"NC_007417.3",12986531,"SNV","C","A","Heterozygous",9,22,40.91,1,4,6,0.4,38.89,10,26,5,7,1.64,0.99,0.89,"no","A/C","No",1,62.57,"XP_969244.1:c.145G>T","XP_969244.1:p.Ala49Ser","LOC657708",657708,null,"657708 [Gene Symbol: LOC657708] [Locus Tag: TcasGA2_TC000332] [Chromosome: LG2] [Map Location: ] [Description: potassium channel subfamily K member 6] [Gene Type: protein-coding]","LOC657708; TcasGA2_TC000332"]
[196,"NC_007417.3",13112207,"SNV","A","G","Homozygous",21,21,100,1,10,17,0.37,36.71,27,27,11,15,null,1,1,"no","G/G","No",1,83.1,"XP_015840704.1:c.3395A>G","XP_015840704.1:p.Glu1132Gly","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[197,"NC_007417.3",13112815,"SNV","G","A","Homozygous",22,22,100,1,13,12,0.48,37.86,25,25,10,16,null,1,1,"no","A/A","No",1,87.71,"XP_015840704.1:c.4003G>A","XP_015840704.1:p.Asp1335Asn","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[198,"NC_007417.3",13114480,"SNV","T","C","Homozygous",29,29,100,1,17,15,0.47,37.38,32,32,14,18,null,1,1,"no","C/C","No",1,107.2,"XP_015840704.1:c.5623T>C","XP_015840704.1:p.*1875Arg","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[199,"NC_007417.3",13114483,"SNV","G","A","Homozygous",26,26,100,1,16,13,0.45,38.31,29,29,13,18,null,1,1,"no","A/A","No",1,99.74,"XP_015840704.1:c.5626G>A","XP_015840704.1:p.Val1876Ile","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[200,"NC_007417.3",13117444,"SNV","A","C","Homozygous",28,28,100,1,8,20,0.29,37.46,28,28,18,16,null,1,1,"no","C/C","No",1,104.19,"XP_015840704.1:c.6850A>C","XP_015840704.1:p.Lys2284Gln","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[201,"NC_007417.3",13117724,"SNV","T","G","Homozygous",21,21,100,1,5,16,0.24,38.05,21,21,12,14,null,1,1,"no","G/G","No",1,83.1,"XP_015840704.1:c.6979T>G","XP_015840704.1:p.Phe2327Val","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[202,"NC_007417.3",13120070,"SNV","C","G","Homozygous",23,23,100,1,14,9,0.39,36.87,23,23,9,16,null,1,1,"no","G/G","No",1,89.12,"XP_015840551.1:c.[1149C>G]; XP_015840552.1:c.[1149C>G]","XP_015840551.1:p.[Ile383Met]; XP_015840552.1:p.[Ile383Met]","LOC659632",659632,null,"659632 [Gene Symbol: LOC659632] [Locus Tag: TcasGA2_TC001240] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase UHRF1] [Gene Type: protein-coding]","TcasGA2_TC001240; LOC659632"]
[203,"NC_007417.3",13199339,"SNV","A","G","Heterozygous",8,21,38.1,1,2,6,0.25,38,8,25,3,3,-0.11,0.2,0.98,"no","A/G","No",1,57.29,"XP_015840017.1:c.1387A>G","XP_015840017.1:p.Ser463Gly","LOC103312164",103312164,null,"103312164 [Gene Symbol: LOC103312164] [Locus Tag: TcasGA2_TC001246] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103312164] [Gene Type: protein-coding]","LOC103312164; TcasGA2_TC001246"]
[204,"NC_007417.3",13207587,"SNV","T","C","Heterozygous",9,23,39.13,1,8,2,0.2,36.22,10,24,4,8,-2.2,0.22,0.29,"no","C/T","No",1,64.55,"XP_008190269.1:c.1391A>G","XP_008190269.1:p.Asn464Ser","LOC660466",660466,null,"660466 [Gene Symbol: LOC660466] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: dnaJ homolog subfamily C member 10-like] [Gene Type: protein-coding]","LOC660466"]
[205,"NC_007417.3",13262971,"SNV","G","C","Homozygous",21,21,100,1,6,17,0.26,38.81,23,23,11,13,null,1,1,"no","C/C","No",1,83.12,"XP_008190278.1:c.[3113C>G]; XP_008190279.1:c.[3110C>G]","XP_008190278.1:p.[Ala1038Gly]; XP_008190279.1:p.[Ala1037Gly]","LOC100141743",100141743,null,"100141743 [Gene Symbol: LOC100141743] [Locus Tag: TcasGA2_TC000301] [Chromosome: LG2] [Map Location: ] [Description: DNA topoisomerase 2-binding protein 1] [Gene Type: protein-coding]","TcasGA2_TC000301; LOC100141743"]
[206,"NC_007417.3",13266510,"SNV","C","T","Homozygous",24,24,100,1,8,19,0.3,39.04,27,27,15,17,null,1,1,"no","T/T","No",1,93.73,"XP_008190278.1:c.[805G>A]; XP_008190279.1:c.[802G>A]","XP_008190278.1:p.[Asp269Asn]; XP_008190279.1:p.[Asp268Asn]","LOC100141743",100141743,null,"100141743 [Gene Symbol: LOC100141743] [Locus Tag: TcasGA2_TC000301] [Chromosome: LG2] [Map Location: ] [Description: DNA topoisomerase 2-binding protein 1] [Gene Type: protein-coding]","TcasGA2_TC000301; LOC100141743"]
[207,"NC_007417.3",13338843,"SNV","C","G","Homozygous",20,20,100,1,13,12,0.48,37.9,25,25,11,16,null,1,1,"no","G/G","No",1,80.09,"XP_973098.1:c.295C>G","XP_973098.1:p.Pro99Ala","LOC661873",661873,null,"661873 [Gene Symbol: LOC661873] [Locus Tag: TcasGA2_TC001263] [Chromosome: LG2] [Map Location: ] [Description: glycerophosphodiester phosphodiesterase 1] [Gene Type: protein-coding]","LOC661873; TcasGA2_TC001263"]
[208,"NC_007417.3",13390168,"SNV","G","C","Homozygous",25,25,100,1,17,11,0.39,38.44,28,28,14,18,null,1,1,"no","C/C","No",1,95.16,"XP_008190285.1:c.[566C>G]; XP_015840711.1:c.[253+17565C>G]; XP_015840713.1:c.[196+17565C>G]; XP_008190286.1:c.[211+17565C>G]","XP_008190285.1:p.Thr189Ser","LOC661960, LOC103312156","661960 , 103312156",null,"661960 [Gene Symbol: LOC661960] [Locus Tag: TcasGA2_TC000286] [Chromosome: LG2] [Map Location: ] [Description: Kv channel-interacting protein 1] [Gene Type: protein-coding] || 103312156 [Gene Symbol: LOC103312156] [Locus Tag: TcasGA2_TC000292] [Chromosome: LG2] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC661960; TcasGA2_TC000286 || TcasGA2_TC000292; LOC103312156"]
[209,"NC_007417.3",13813079,"SNV","C","T","Homozygous",19,21,90.48,0.99,18,7,0.28,38,25,27,13,13,null,0.98,1,"no","T/T","No",1,21.4,"XP_966624.1:c.913G>A","XP_966624.1:p.Glu305Lys","LOC655035",655035,null,"655035 [Gene Symbol: LOC655035] [Locus Tag: TcasGA2_TC000267] [Chromosome: LG2] [Map Location: ] [Description: U3 small nucleolar RNA-associated protein 18 homolog] [Gene Type: protein-coding]","LOC655035; TcasGA2_TC000267"]
[210,"NC_007417.3",14029885,"SNV","T","G","Heterozygous",8,20,40,1,3,5,0.38,36.25,8,24,4,7,-1.35,0.8,0.98,"no","G/T","No",1,59.58,"XP_967490.1:c.[730T>G]; XP_015840996.1:c.[829T>G]; XP_015840994.1:c.[844T>G]; XP_008190334.1:c.[841T>G]; XP_015840995.1:c.[841T>G]; XP_008190335.1:c.[730T>G]","XP_967490.1:p.[Ser244Ala]; XP_015840996.1:p.[Ser277Ala]; XP_015840994.1:p.[Ser282Ala]; XP_008190334.1:p.[Ser281Ala]; XP_015840995.1:p.[Ser281Ala]; XP_008190335.1:p.[Ser244Ala]","LOC655834",655834,null,"655834 [Gene Symbol: LOC655834] [Locus Tag: TcasGA2_TC001293] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC655834] [Gene Type: protein-coding]","TcasGA2_TC001293; LOC655834"]
[211,"NC_007417.3",14195873,"SNV","C","T","Homozygous",20,20,100,1,18,5,0.22,36.45,23,23,12,15,null,1,1,"no","T/T","No",1,81.71,"XP_968658.1:c.172G>A","XP_968658.1:p.Gly58Arg","LOC657085",657085,null,"657085 [Gene Symbol: LOC657085] [Locus Tag: TcasGA2_TC000247] [Chromosome: LG2] [Map Location: ] [Description: serine protease H2] [Gene Type: protein-coding]","TcasGA2_TC000247; LOC657085; H2"]
[212,"NC_007417.3",14309935,"SNV","A","G","Homozygous",23,23,100,1,9,17,0.35,37.43,26,26,12,12,null,1,1,"no","G/G","No",1,89.12,"XP_008190356.1:c.2125T>C","XP_008190356.1:p.Ser709Pro","LOC658024",658024,null,"658024 [Gene Symbol: LOC658024] [Locus Tag: TcasGA2_TC000238] [Chromosome: LG2] [Map Location: ] [Description: fatty acid synthase] [Gene Type: protein-coding]","LOC658024; TcasGA2_TC000238"]
[213,"NC_007417.3",14777529,"SNV","G","C","Homozygous",22,22,100,1,8,16,0.33,38.27,24,24,10,17,null,1,1,"no","C/C","No",1,86.13,"XP_972703.3:c.550C>G","XP_972703.3:p.Gln184Glu","LOC661455",661455,null,"661455 [Gene Symbol: LOC661455] [Locus Tag: TcasGA2_TC000203] [Chromosome: LG2] [Map Location: ] [Description: venom acid phosphatase Acph-1] [Gene Type: protein-coding]","TcasGA2_TC000203; LOC661455"]
[214,"NC_007418.3",607870,"SNV","C","G","Heterozygous",5,23,21.74,0.94,5,0,0,34.6,5,27,2,4,-1.57,0.05,0.29,"no","C/G","No",1,12.49,"XP_973652.1:c.705G>C","XP_973652.1:p.Gln235His","LOC662467",662467,null,"662467 [Gene Symbol: LOC662467] [Locus Tag: TcasGA2_TC003180] [Chromosome: LG3] [Map Location: ] [Description: prostaglandin E synthase 2] [Gene Type: protein-coding]","LOC662467; TcasGA2_TC003180"]
[215,"NC_007418.3",718868,"SNV","A","G","Heterozygous",11,21,52.38,1,4,7,0.36,38.55,11,21,5,8,2.68,0.4,0.83,"no","A/G","No",1,81.68,"XP_974169.1:c.178A>G","XP_974169.1:p.Ile60Val","LOC663144, LOC663011","663144 , 663011",null,"663144 [Gene Symbol: LOC663144] [Locus Tag: TcasGA2_TC003170] [Chromosome: LG3] [Map Location: ] [Description: absent MD neurons and olfactory sensilla] [Gene Type: protein-coding] || 663011 [Gene Symbol: LOC663011] [Locus Tag: TcasGA2_TC003282] [Chromosome: LG3] [Map Location: ] [Description: tyramine beta hydroxylase] [Gene Type: protein-coding]","Amos; Tath1; TcasGA2_TC003170; LOC663144 || TcTBH; LOC663011; TcasGA2_TC003282"]
[216,"NC_007418.3",1005401,"SNV","A","G","Heterozygous",16,36,44.44,1,8,8,0.5,36.19,16,36,9,14,-0.1,0.47,0.46,"no","A/G","No",1,117.41,"XP_008190598.1:c.517A>G","XP_008190598.1:p.Met173Val","LOC663465",663465,null,"663465 [Gene Symbol: LOC663465] [Locus Tag: TcasGA2_TC003303] [Chromosome: LG3] [Map Location: ] [Description: cytochrome c oxidase subunit 6B2] [Gene Type: protein-coding]","LOC663465; TcasGA2_TC003303"]
[217,"NC_007418.3",1239552,"SNV","T","A","Homozygous",24,24,100,1,16,11,0.41,37.54,27,27,13,19,null,1,1,"no","A/A","No",1,93.72,"XP_975769.1:c.721T>A","XP_975769.1:p.Ser241Thr","LOC656817",656817,null,"656817 [Gene Symbol: LOC656817] [Locus Tag: TcasGA2_TC003323] [Chromosome: LG3] [Map Location: ] [Description: cytochrome b-c1 complex subunit 2, mitochondrial] [Gene Type: protein-coding]","LOC656817; TcasGA2_TC003323"]
[218,"NC_007418.3",1257258,"SNV","G","A","Heterozygous",5,21,23.81,0.98,1,5,0.17,36,6,23,2,2,-2.02,0.12,0.23,"no","A/G","No",1,18.12,"XP_015833126.1:c.[4400C>T]; XP_015833125.1:c.[4400C>T]; XP_015833124.1:c.[4400C>T]; XP_015833123.1:c.[4400C>T]","XP_015833126.1:p.[Ala1467Val]; XP_015833125.1:p.[Ala1467Val]; XP_015833124.1:p.[Ala1467Val]; XP_015833123.1:p.[Ala1467Val]","LOC103312261",103312261,null,"103312261 [Gene Symbol: LOC103312261] [Locus Tag: TcasGA2_TC003135] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: uncharacterized LOC103312261] [Gene Type: protein-coding]","TcasGA2_TC003135; LOC103312261"]
[219,"NC_007418.3",1364665,"SNV","A","G","Homozygous",24,24,100,1,19,11,0.37,38.79,30,30,14,18,null,1,1,"no","G/G","No",1,92.13,"XP_008190660.1:c.404T>C","XP_008190660.1:p.Leu135Pro","LOC658025",658025,null,"658025 [Gene Symbol: LOC658025] [Locus Tag: TcasGA2_TC003128] [Chromosome: LG3] [Map Location: ] [Description: serine/threonine-protein kinase SMG1] [Gene Type: protein-coding]","LOC658025; TcasGA2_TC003128"]
[220,"NC_007418.3",1478820,"SNV","G","A","Heterozygous",18,26,69.23,1,7,15,0.32,37.5,22,34,8,8,1.75,0.92,1,"no","A/G","No",1,43.34,"XP_970955.1:c.260C>T","XP_970955.1:p.Thr87Ile","LOC659707, LOC659570","659707 , 659570",null,"659707 [Gene Symbol: LOC659707] [Locus Tag: TcasGA2_TC003341] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein phosphatase Lar] [Gene Type: protein-coding] || 659570 [Gene Symbol: LOC659570] [Locus Tag: TcasGA2_TC003109] [Chromosome: LG3] [Map Location: ] [Description: cuticle protein 7] [Gene Type: protein-coding]","LOC659707; TcasGA2_TC003341 || LOC659570; TcasGA2_TC003109"]
[221,"NC_007418.3",2016979,"SNV","G","T","Homozygous",20,20,100,1,9,14,0.39,37.8,23,23,11,16,null,1,1,"no","T/T","No",1,81.7,"XP_972111.1:c.2490G>T","XP_972111.1:p.Met830Ile","LOC660815",660815,null,"660815 [Gene Symbol: LOC660815] [Locus Tag: TcasGA2_TC003352] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase-like otk] [Gene Type: protein-coding]","TcasGA2_TC003352; LOC660815"]
[222,"NC_007418.3",2410631,"SNV","A","C","Heterozygous",15,22,68.18,1,10,8,0.44,37.2,18,25,8,12,-0.88,0.83,0.87,"no","A/C","No",1,37.05,"XP_015833150.1:c.[3748A>C]; XP_015833152.1:c.[3586A>C]; XP_015833149.1:c.[3748A>C]; XP_008190700.1:c.[3745A>C]","XP_015833150.1:p.[Met1250Leu]; XP_015833152.1:p.[Met1196Leu]; XP_015833149.1:p.[Met1250Leu]; XP_008190700.1:p.[Met1249Leu]","LOC661200",661200,null,"661200 [Gene Symbol: LOC661200] [Locus Tag: TcasGA2_TC003360] [Chromosome: LG3] [Map Location: ] [Description: nephrin] [Gene Type: protein-coding]","TcasGA2_TC003360; LOC661200"]
[223,"NC_007418.3",2447601,"SNV","C","T","Heterozygous",7,26,26.92,1,7,0,0,36.57,7,30,3,5,-0.58,0.08,0.23,"no","C/T","No",1,29.55,"NP_001182329.1:c.[298C>T]; XP_008190751.1:c.[298C>T]; XP_015833051.1:c.[298C>T]","NP_001182329.1:p.[Pro100Ser]; XP_008190751.1:p.[Pro100Ser]; XP_015833051.1:p.[Pro100Ser]","LOC100141989",100141989,"resilin","100141989 [Gene Symbol: LOC100141989] [Locus Tag: TcasGA2_TC003362] [Chromosome: LG3] [Map Location: ] [Description: resilin] [Gene Type: protein-coding]","LOC100141989; TcasGA2_TC003362"]
[224,"NC_007418.3",2672603,"SNV","C","T","Heterozygous",7,20,35,1,5,2,0.29,36.57,7,23,4,4,-0.79,0.34,0.79,"no","C/T","No",1,46.19,"XP_015833206.1:c.[133G>A]; XP_015833207.1:c.[25G>A]; XP_015833208.1:c.[25G>A]; XP_008190761.1:c.[25G>A]","XP_015833206.1:p.[Ala45Thr]; XP_015833207.1:p.[Ala9Thr]; XP_015833208.1:p.[Ala9Thr]; XP_008190761.1:p.[Ala9Thr]","LOC655749",655749,null,"655749 [Gene Symbol: LOC655749] [Locus Tag: TcasGA2_TC003075] [Chromosome: LG3] [Map Location: ] [Description: cyclic nucleotide-gated cation channel subunit A] [Gene Type: protein-coding]","LOC655749; TcasGA2_TC003075"]
[225,"NC_007418.3","2816172..2816173","MNV","CA","TG","Heterozygous",17,22,77.27,1,7,11,0.39,39.71,18,25,10,14,2.39,0.63,1,"no","complex","No",1,200,"XP_015833187.1:c.[267_268delTGinsCA]; XP_008190779.1:c.[633_634delTGinsCA]","XP_015833187.1:p.[Asp90Asn]; XP_008190779.1:p.[Asp212Asn]","LOC103312285",103312285,null,"103312285 [Gene Symbol: LOC103312285] [Locus Tag: TcasGA2_TC003066] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312285; TcasGA2_TC003066"]
[226,"NC_007418.3",3456464,"SNV","A","G","Homozygous",23,23,100,1,18,13,0.42,37.96,31,31,15,17,null,1,1,"no","G/G","No",1,89.12,"XP_015833184.1:c.[1393A>G]; XP_968570.1:c.[2101A>G]","XP_015833184.1:p.[Asn465Asp]; XP_968570.1:p.[Asn701Asp]","LOC656984",656984,null,"656984 [Gene Symbol: LOC656984] [Locus Tag: TcasGA2_TC001556] [Chromosome: LG3] [Map Location: ] [Description: peroxidasin] [Gene Type: protein-coding]","Pxn; LOC656984; TcasGA2_TC001556"]
[227,"NC_007418.3",3785574,"SNV","T","C","Homozygous",21,21,100,1,15,7,0.32,38.1,22,22,16,16,null,1,1,"no","C/C","No",1,83.12,"XP_008200301.1:c.119T>C","XP_008200301.1:p.Val40Ala","LOC103314889",103314889,null,"103314889 [Gene Symbol: LOC103314889] [Locus Tag: TcasGA2_TC034581] [Chromosome: LG3] [Map Location: LG3|LGX] [Description: uncharacterized LOC103314889] [Gene Type: protein-coding]","TcasGA2_TC034581; LOC103314889"]
[228,"NC_007418.3",3796193,"SNV","C","T","Heterozygous",16,20,80,0.89,16,4,0.2,39.25,20,24,10,8,-1.89,0.97,0.99,"no","C/T","No",1,9.66,"XP_971192.1:c.562G>A","XP_971192.1:p.Val188Ile","LOC659827",659827,null,"659827 [Gene Symbol: LOC659827] [Locus Tag: TcasGA2_TC011515] [Chromosome: LG3] [Map Location: ] [Description: DNA polymerase eta] [Gene Type: protein-coding]","TcasGA2_TC011515; LOC659827"]
[229,"NC_007418.3",3856109,"SNV","A","G","Homozygous",21,21,100,1,10,15,0.4,36.76,25,25,10,15,null,1,1,"no","G/G","No",1,83.1,"XP_015833077.1:c.[1669A>G]; XP_008200294.1:c.[1669A>G]","XP_015833077.1:p.[Asn557Asp]; XP_008200294.1:p.[Asn557Asp]","LOC100142377",100142377,null,"100142377 [Gene Symbol: LOC100142377] [Locus Tag: TcasGA2_TC011553] [Chromosome: LG3] [Map Location: ] [Description: myosin 1B] [Gene Type: protein-coding]","Myo1B; LOC100142377; TcasGA2_TC011553"]
[230,"NC_007418.3",3866859,"SNV","C","G","Heterozygous",11,23,47.83,1,11,0,0,36.36,11,24,4,11,-3.29,0.12,0.34,"no","C/G","No",1,88.61,"XP_008200296.1:c.1323G>C","XP_008200296.1:p.Gln441His","LOC660207",660207,null,"660207 [Gene Symbol: LOC660207] [Locus Tag: TcasGA2_TC011508] [Chromosome: LG3] [Map Location: ] [Description: contactin-associated protein-like 3] [Gene Type: protein-coding]","TcasGA2_TC011508; LOC660207"]
[231,"NC_007418.3",4033555,"SNV","G","C","Homozygous",29,29,100,1,17,13,0.43,37.14,30,30,16,18,null,1,1,"no","C/C","No",1,107.2,"XP_971269.1:c.311G>C","XP_971269.1:p.Ser104Thr","LOC659910",659910,null,"659910 [Gene Symbol: LOC659910] [Locus Tag: TcasGA2_TC003033] [Chromosome: LG3] [Map Location: ] [Description: mitochondrial inner membrane protease ATP23 homolog] [Gene Type: protein-coding]","TcasGA2_TC003033; LOC659910"]
[232,"NC_007418.3",4142599,"SNV","A","T","Homozygous",20,20,100,1,9,14,0.39,36.1,23,23,9,15,null,1,1,"no","T/T","No",1,81.7,"XP_969027.1:c.799T>A","XP_969027.1:p.Ser267Thr","LOC657476",657476,null,"657476 [Gene Symbol: LOC657476] [Locus Tag: TcasGA2_TC003377] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC657476] [Gene Type: protein-coding]","LOC657476; TcasGA2_TC003377"]
[233,"NC_007418.3","4797072..4797073","MNV","CG","TT","Homozygous",21,21,100,1,12,15,0.44,37.57,27,27,17,17,null,1,1,"no","TT/TT","No",1,200,"XP_015833340.1:c.[3144_3145delCGinsAA]; XP_008190866.1:c.[3144_3145delCGinsAA]","XP_015833340.1:p.[Asp1048_Glu1049delinsGluLys]; XP_008190866.1:p.[Asp1048_Glu1049delinsGluLys]","LOC103312310",103312310,null,"103312310 [Gene Symbol: LOC103312310] [Locus Tag: TcasGA2_TC003005] [Chromosome: LG3] [Map Location: ] [Description: muscle M-line assembly protein unc-89] [Gene Type: protein-coding]","LOC103312310; TcasGA2_TC003005"]
[234,"NC_007418.3","4798244..4798245","MNV","GG","CT","Homozygous",20,20,100,1,14,10,0.42,36.58,24,24,13,14,null,1,1,"no","CT/CT","No",1,200,"XP_008190866.1:c.[1972_1973delCCinsAG]; XP_015833340.1:c.[1972_1973delCCinsAG]","XP_008190866.1:p.[Pro658Ser]; XP_015833340.1:p.[Pro658Ser]","LOC103312310",103312310,null,"103312310 [Gene Symbol: LOC103312310] [Locus Tag: TcasGA2_TC003005] [Chromosome: LG3] [Map Location: ] [Description: muscle M-line assembly protein unc-89] [Gene Type: protein-coding]","LOC103312310; TcasGA2_TC003005"]
[235,"NC_007418.3","4798287..4798288","MNV","GT","CG","Homozygous",20,20,100,1,6,17,0.26,39.1,23,23,13,17,null,1,1,"no","CG/CG","No",1,200,"XP_015833340.1:c.[1929_1930delACinsCG]; XP_008190866.1:c.[1929_1930delACinsCG]","XP_015833340.1:p.[Lys643_Pro644delinsAsnAla]; XP_008190866.1:p.[Lys643_Pro644delinsAsnAla]","LOC103312310",103312310,null,"103312310 [Gene Symbol: LOC103312310] [Locus Tag: TcasGA2_TC003005] [Chromosome: LG3] [Map Location: ] [Description: muscle M-line assembly protein unc-89] [Gene Type: protein-coding]","LOC103312310; TcasGA2_TC003005"]
[236,"NC_007418.3",5001239,"SNV","G","T","Homozygous",21,21,100,1,15,9,0.38,37.62,24,24,12,13,null,1,1,"no","T/T","No",1,84.7,"XP_970038.1:c.1875C>A","XP_970038.1:p.Asp625Glu","LOC658568",658568,null,"658568 [Gene Symbol: LOC658568] [Locus Tag: TcasGA2_TC003001] [Chromosome: LG3] [Map Location: ] [Description: WD repeat-containing protein 3] [Gene Type: protein-coding]","TcasGA2_TC003001; LOC658568"]
[237,"NC_007418.3",5013802,"SNV","T","C","Homozygous",22,22,100,1,12,13,0.48,37.82,25,25,12,16,null,1,1,"no","C/C","No",1,86.13,"XP_015833512.1:c.788A>G","XP_015833512.1:p.Lys263Arg","LOC658653",658653,null,"658653 [Gene Symbol: LOC658653] [Locus Tag: TcasGA2_TC003000] [Chromosome: LG3] [Map Location: ] [Description: cubitus interruptus] [Gene Type: protein-coding]","LOC658653; Ci; TcasGA2_TC003000"]
[238,"NC_007418.3",5150717,"SNV","A","G","Homozygous",22,22,100,1,15,10,0.4,38.18,25,25,13,15,null,1,1,"no","G/G","No",1,86.11,"XP_970503.2:c.364A>G","XP_970503.2:p.Ile122Val","LOC659078",659078,null,"659078 [Gene Symbol: LOC659078] [Locus Tag: TcasGA2_TC003434] [Chromosome: LG3] [Map Location: ] [Description: major facilitator superfamily domain-containing protein 6] [Gene Type: protein-coding]","LOC659078; TcasGA2_TC003434"]
[239,"NC_007418.3",5426190,"SNV","G","C","Homozygous",21,21,100,1,14,9,0.39,38.95,23,23,11,13,null,1,1,"no","C/C","No",1,83.12,"XP_972914.1:c.[186G>C]; XP_015833325.1:c.[186G>C]; XP_008190904.1:c.[186G>C]","XP_972914.1:p.[Glu62Asp]; XP_015833325.1:p.[Glu62Asp]; XP_008190904.1:p.[Glu62Asp]","LOC661672",661672,null,"661672 [Gene Symbol: LOC661672] [Locus Tag: TcasGA2_TC003462] [Chromosome: LG3] [Map Location: ] [Description: THUMP domain-containing protein 1 homolog] [Gene Type: protein-coding]","LOC661672; TcasGA2_TC003462"]
[240,"NC_007418.3",5426393,"SNV","G","A","Homozygous",22,22,100,1,11,14,0.44,38.86,25,25,13,17,null,1,1,"no","A/A","No",1,87.71,"XP_972914.1:c.[389G>A]; XP_008190904.1:c.[389G>A]; XP_015833325.1:c.[389G>A]","XP_972914.1:p.[Arg130Lys]; XP_008190904.1:p.[Arg130Lys]; XP_015833325.1:p.[Arg130Lys]","LOC661672",661672,null,"661672 [Gene Symbol: LOC661672] [Locus Tag: TcasGA2_TC003462] [Chromosome: LG3] [Map Location: ] [Description: THUMP domain-containing protein 1 homolog] [Gene Type: protein-coding]","LOC661672; TcasGA2_TC003462"]
[241,"NC_007418.3",5426471,"SNV","T","G","Homozygous",21,21,100,1,4,17,0.19,37.33,21,21,12,15,null,1,1,"no","G/G","No",1,83.1,"XP_008190904.1:c.[467T>G]; XP_015833325.1:c.[467T>G]; XP_972914.1:c.[467T>G]","XP_008190904.1:p.[Val156Gly]; XP_015833325.1:p.[Val156Gly]; XP_972914.1:p.[Val156Gly]","LOC661672",661672,null,"661672 [Gene Symbol: LOC661672] [Locus Tag: TcasGA2_TC003462] [Chromosome: LG3] [Map Location: ] [Description: THUMP domain-containing protein 1 homolog] [Gene Type: protein-coding]","LOC661672; TcasGA2_TC003462"]
[242,"NC_007418.3",5435539,"SNV","C","G","Homozygous",21,21,100,1,15,7,0.32,38.95,22,22,15,14,null,1,1,"no","G/G","No",1,83.1,"XP_008190905.1:c.2287G>C","XP_008190905.1:p.Ala763Pro","LOC661754",661754,null,"661754 [Gene Symbol: LOC661754] [Locus Tag: TcasGA2_TC002977] [Chromosome: LG3] [Map Location: ] [Description: BAI1-associated protein 3] [Gene Type: protein-coding]","TcasGA2_TC002977; LOC661754"]
[243,"NC_007418.3",5718125,"SNV","A","T","Homozygous",20,20,100,1,15,7,0.32,37.35,22,22,9,14,null,1,1,"no","T/T","No",1,81.69,"XP_015833269.1:c.[32741T>A]; XP_015833268.1:c.[32804T>A]; XP_015833270.1:c.[32804T>A]","XP_015833269.1:p.[Leu10914His]; XP_015833268.1:p.[Leu10935His]; XP_015833270.1:p.[Leu10935His]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[244,"NC_007418.3",5749024,"SNV","C","T","Homozygous",24,24,100,1,11,17,0.39,39.42,28,28,14,17,null,1,1,"no","T/T","No",1,93.72,"XP_015833270.1:c.[16114G>A]; XP_015833268.1:c.[16114G>A]; XP_015833269.1:c.[16051G>A]","XP_015833270.1:p.[Asp5372Asn]; XP_015833268.1:p.[Asp5372Asn]; XP_015833269.1:p.[Asp5351Asn]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[245,"NC_007418.3",5749366,"SNV","T","C","Homozygous",20,20,100,1,12,11,0.48,38,23,23,15,15,null,1,1,"no","C/C","No",1,80.12,"XP_015833270.1:c.[15772A>G]; XP_015833268.1:c.[15772A>G]; XP_015833269.1:c.[15709A>G]","XP_015833270.1:p.[Lys5258Glu]; XP_015833268.1:p.[Lys5258Glu]; XP_015833269.1:p.[Lys5237Glu]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[246,"NC_007418.3",5756521,"SNV","T","C","Homozygous",20,20,100,1,11,9,0.45,37.85,20,20,11,15,null,1,1,"no","C/C","No",1,80.12,"XP_015833270.1:c.[8617A>G]; XP_015833268.1:c.[8617A>G]; XP_015833269.1:c.[8554A>G]","XP_015833270.1:p.[Lys2873Glu]; XP_015833268.1:p.[Lys2873Glu]; XP_015833269.1:p.[Lys2852Glu]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[247,"NC_007418.3",5789031,"SNV","A","T","Homozygous",20,20,100,1,16,10,0.38,38.95,26,26,11,13,null,1,1,"no","T/T","No",1,81.7,"XP_974036.1:c.[3116T>A]; XP_015833277.1:c.[3116T>A]","XP_974036.1:p.[Leu1039Gln]; XP_015833277.1:p.[Leu1039Gln]","LOC662868",662868,null,"662868 [Gene Symbol: LOC662868] [Locus Tag: TcasGA2_TC002959] [Chromosome: LG3] [Map Location: ] [Description: hamartin] [Gene Type: protein-coding]","LOC662868; TcasGA2_TC002959"]
[248,"NC_007418.3",5791012,"SNV","A","T","Homozygous",21,21,100,1,11,15,0.42,36,26,26,12,12,null,1,1,"no","T/T","No",1,84.71,"XP_974036.1:c.[1420T>A]; XP_015833277.1:c.[1420T>A]","XP_974036.1:p.[Cys474Ser]; XP_015833277.1:p.[Cys474Ser]","LOC662868",662868,null,"662868 [Gene Symbol: LOC662868] [Locus Tag: TcasGA2_TC002959] [Chromosome: LG3] [Map Location: ] [Description: hamartin] [Gene Type: protein-coding]","LOC662868; TcasGA2_TC002959"]
[249,"NC_007418.3",5977777,"SNV","C","G","Homozygous",20,20,100,1,13,7,0.35,36.35,20,20,8,10,null,1,1,"no","G/G","No",1,80.09,"XP_974693.1:c.348G>C","XP_974693.1:p.Lys116Asn","LOC663561",663561,null,"663561 [Gene Symbol: LOC663561] [Locus Tag: TcasGA2_TC002942] [Chromosome: LG3] [Map Location: ] [Description: zinc transporter ZIP1] [Gene Type: protein-coding]","TcasGA2_TC002942; LOC663561"]
[250,"NC_007418.3",6634184,"SNV","C","A","Homozygous",21,21,100,1,11,13,0.46,37.1,24,24,13,17,null,1,1,"no","A/A","No",1,84.7,"XP_015833347.1:c.6875C>A","XP_015833347.1:p.Thr2292Asn","LOC664216",664216,null,"664216 [Gene Symbol: LOC664216] [Locus Tag: TcasGA2_TC003537] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC664216] [Gene Type: protein-coding]","TcasGA2_TC003537; LOC664216"]
[251,"NC_007418.3","6642406^6642407","Insertion","-","A","Homozygous",20,20,100,1,16,7,0.3,37.15,23,23,14,10,null,1,1,"no","A/A","No",1,81.69,"XP_015833347.1:c.8355_8356insA","XP_015833347.1:p.Asn2786fs","LOC664216",664216,null,"664216 [Gene Symbol: LOC664216] [Locus Tag: TcasGA2_TC003537] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC664216] [Gene Type: protein-coding]","TcasGA2_TC003537; LOC664216"]
[252,"NC_007418.3",6758724,"SNV","T","C","Homozygous",24,24,100,1,8,16,0.33,37.5,24,24,11,20,null,1,1,"no","C/C","No",1,92.15,"XP_008191009.1:c.2894A>G","XP_008191009.1:p.Lys965Arg","LOC664250",664250,null,"664250 [Gene Symbol: LOC664250] [Locus Tag: TcasGA2_TC002906] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC664250] [Gene Type: protein-coding]","LOC664250; TcasGA2_TC002906"]
[253,"NC_007418.3",6823279,"SNV","C","T","Homozygous",40,40,100,1,37,7,0.16,39.05,44,44,19,21,null,1,1,"no","T/T","No",1,141.84,"XP_008191016.1:c.382G>A","XP_008191016.1:p.Val128Met","LOC103312349",103312349,null,"103312349 [Gene Symbol: LOC103312349] [Locus Tag: TcasGA2_TC002904] [Chromosome: LG3] [Map Location: ] [Description: putative inositol monophosphatase 3] [Gene Type: protein-coding]","TcasGA2_TC002904; LOC103312349"]
[254,"NC_007418.3","6831210^6831211","Insertion","-","ACG","Homozygous",29,29,100,1,14,16,0.47,36.68,30,30,17,19,null,1,1,"no","ACG/ACG","No",1,200,"XP_975371.1:c.526_527insACG","XP_975371.1:p.Asn176_Glu177insAsp","LOC664269",664269,null,"664269 [Gene Symbol: LOC664269] [Locus Tag: TcasGA2_TC003540] [Chromosome: LG3] [Map Location: ] [Description: glycogen-binding subunit 76A] [Gene Type: protein-coding]","TcasGA2_TC003540; LOC664269"]
[255,"NC_007418.3",7043504,"SNV","A","G","Homozygous",23,23,100,1,8,18,0.31,37.39,26,26,11,15,null,1,1,"no","G/G","No",1,89.12,"XP_975437.1:c.289T>C","XP_975437.1:p.Ser97Pro","LOC664335",664335,null,"664335 [Gene Symbol: LOC664335] [Locus Tag: TcasGA2_TC002894] [Chromosome: LG3] [Map Location: ] [Description: probable serine hydrolase] [Gene Type: protein-coding]","LOC664335; TcasGA2_TC002894"]
[256,"NC_007418.3",7129598,"SNV","G","A","Homozygous",26,26,100,1,18,8,0.31,38.81,26,26,10,20,null,1,1,"no","A/A","No",1,99.74,"XP_975456.1:c.[55C>T]; XP_008191036.1:c.[502-8841G>A]; XP_008191037.1:c.[502-8841G>A]","XP_975456.1:p.Pro19Ser","LOC664359, LOC664352","664359 , 664352",null,"664359 [Gene Symbol: LOC664359] [Locus Tag: TcasGA2_TC003550] [Chromosome: LG3] [Map Location: ] [Description: sestrin homolog] [Gene Type: protein-coding] || 664352 [Gene Symbol: LOC664352] [Locus Tag: TcasGA2_TC002890] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC664352] [Gene Type: protein-coding]","LOC664359; TcasGA2_TC003550 || TcasGA2_TC002890; LOC664352"]
[257,"NC_007418.3",7525934,"SNV","G","A","Homozygous",20,20,100,1,5,15,0.25,35.8,20,20,11,12,null,1,1,"no","A/A","No",1,81.69,"XP_967064.1:c.6677C>T","XP_967064.1:p.Thr2226Ile","LOC655426",655426,null,"655426 [Gene Symbol: LOC655426] [Locus Tag: TcasGA2_TC002881] [Chromosome: LG3] [Map Location: ] [Description: E3 SUMO-protein ligase RanBP2] [Gene Type: protein-coding]","TcasGA2_TC002881; LOC655426"]
[258,"NC_007418.3",7530076,"SNV","T","G","Homozygous",26,26,100,1,15,22,0.41,37.23,37,37,14,18,null,1,1,"no","G/G","No",1,98.15,"XP_967064.1:c.3680A>C","XP_967064.1:p.Asn1227Thr","LOC655426",655426,null,"655426 [Gene Symbol: LOC655426] [Locus Tag: TcasGA2_TC002881] [Chromosome: LG3] [Map Location: ] [Description: E3 SUMO-protein ligase RanBP2] [Gene Type: protein-coding]","TcasGA2_TC002881; LOC655426"]
[259,"NC_007418.3",7532876,"SNV","G","A","Homozygous",26,26,100,1,12,16,0.43,38.38,28,28,16,16,null,1,1,"no","A/A","No",1,99.74,"XP_967064.1:c.880C>T","XP_967064.1:p.His294Tyr","LOC655426",655426,null,"655426 [Gene Symbol: LOC655426] [Locus Tag: TcasGA2_TC002881] [Chromosome: LG3] [Map Location: ] [Description: E3 SUMO-protein ligase RanBP2] [Gene Type: protein-coding]","TcasGA2_TC002881; LOC655426"]
[260,"NC_007418.3",7596827,"SNV","T","C","Homozygous",20,20,100,1,8,12,0.4,38.6,20,20,13,17,null,1,1,"no","C/C","No",1,80.12,"XP_967495.1:c.5863A>G","XP_967495.1:p.Thr1955Ala","LOC655839",655839,null,"655839 [Gene Symbol: LOC655839] [Locus Tag: TcasGA2_TC002876] [Chromosome: LG3] [Map Location: ] [Description: HEAT repeat-containing protein 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC002876; LOC655839"]
[261,"NC_007418.3",7611133,"SNV","G","C","Homozygous",25,25,100,1,10,20,0.33,39.08,30,30,12,14,null,1,1,"no","C/C","No",1,95.16,"XP_008191066.1:c.[2175C>G]; XP_008191067.1:c.[1279+2296G>C]","XP_008191066.1:p.Ser725Arg","LOC103312366, LOC656169","103312366 , 656169",null,"103312366 [Gene Symbol: LOC103312366] [Locus Tag: TcasGA2_TC003567] [Chromosome: LG3] [Map Location: ] [Description: maternal embryonic leucine zipper kinase] [Gene Type: protein-coding] || 656169 [Gene Symbol: LOC656169] [Locus Tag: TcasGA2_TC002875] [Chromosome: LG3] [Map Location: ] [Description: elongation factor Tu GTP-binding domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC003567; LOC103312366 || LOC656169; TcasGA2_TC002875"]
[262,"NC_007418.3",8042509,"SNV","G","C","Homozygous",20,20,100,1,10,13,0.43,39.5,23,23,13,12,null,1,1,"no","C/C","No",1,80.11,"XP_015833523.1:c.214C>G","XP_015833523.1:p.Arg72Gly","LOC657250",657250,null,"657250 [Gene Symbol: LOC657250] [Locus Tag: TcasGA2_TC002858] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: neutral alpha-glucosidase AB] [Gene Type: protein-coding]","LOC657250; TcasGA2_TC002858"]
[263,"NC_007418.3",8045386,"SNV","C","T","Homozygous",21,21,100,1,8,13,0.38,37.81,21,21,9,12,null,1,1,"no","T/T","No",1,84.7,"XP_968957.1:c.731G>A","XP_968957.1:p.Arg244Lys","LOC657402",657402,null,"657402 [Gene Symbol: LOC657402] [Locus Tag: TcasGA2_TC002857] [Chromosome: LG3] [Map Location: ] [Description: aspartate--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC657402; TcasGA2_TC002857"]
[264,"NC_007418.3",8154624,"SNV","C","T","Homozygous",26,26,100,1,6,21,0.22,38.12,27,27,18,15,null,1,1,"no","T/T","No",1,99.74,"XP_008191810.1:c.[1196C>T]; XP_008191799.1:c.[1319C>T]; XP_008191804.1:c.[1196C>T]","XP_008191810.1:p.[Ala399Val]; XP_008191799.1:p.[Ala440Val]; XP_008191804.1:p.[Ala399Val]","LOC103312586",103312586,null,"103312586 [Gene Symbol: LOC103312586] [Locus Tag: TcasGA2_TC003588] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312586; TcasGA2_TC003588"]
[265,"NC_007418.3",8154640,"SNV","A","G","Homozygous",23,23,100,1,7,16,0.3,38.48,23,23,15,14,null,1,1,"no","G/G","No",1,89.12,"XP_008191804.1:c.[1212A>G]; XP_008191810.1:c.[1212A>G]; XP_008191799.1:c.[1335A>G]","XP_008191804.1:p.[Ile404Met]; XP_008191810.1:p.[Ile404Met]; XP_008191799.1:p.[Ile445Met]","LOC103312586",103312586,null,"103312586 [Gene Symbol: LOC103312586] [Locus Tag: TcasGA2_TC003588] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312586; TcasGA2_TC003588"]
[266,"NC_007418.3",8494624,"SNV","C","A","Heterozygous",13,41,31.71,1,9,4,0.31,40,13,47,12,11,3.46,0.04,0.45,"no","A/C","No",1,60.63,"XP_008191839.1:c.147C>A","XP_008191839.1:p.Asn49Lys","LOC103312598",103312598,null,"103312598 [Gene Symbol: LOC103312598] [Locus Tag: TcasGA2_TC003592] [Chromosome: LG3] [Map Location: ] [Description: major royal jelly protein 3] [Gene Type: protein-coding]","TcasGA2_TC003592; LOC103312598"]
[267,"NC_007418.3",8494721,"SNV","G","A","Heterozygous",17,62,27.42,1,9,10,0.47,37.76,19,67,13,13,0.41,0.5,0.98,"no","A/G","No",1,56.72,"XP_008191839.1:c.244G>A","XP_008191839.1:p.Glu82Lys","LOC103312598",103312598,null,"103312598 [Gene Symbol: LOC103312598] [Locus Tag: TcasGA2_TC003592] [Chromosome: LG3] [Map Location: ] [Description: major royal jelly protein 3] [Gene Type: protein-coding]","TcasGA2_TC003592; LOC103312598"]
[268,"NC_007418.3",8494776,"SNV","A","G","Heterozygous",7,32,21.88,0.96,5,2,0.29,38.14,7,32,6,5,0.84,0.37,0.29,"no","A/G","No",1,14.07,"XP_008191839.1:c.299A>G","XP_008191839.1:p.Asp100Gly","LOC103312598",103312598,null,"103312598 [Gene Symbol: LOC103312598] [Locus Tag: TcasGA2_TC003592] [Chromosome: LG3] [Map Location: ] [Description: major royal jelly protein 3] [Gene Type: protein-coding]","TcasGA2_TC003592; LOC103312598"]
[269,"NC_007418.3",8806795,"SNV","G","C","Homozygous",20,20,100,1,11,11,0.5,36.5,22,22,10,16,null,1,1,"no","C/C","No",1,80.11,"XP_008191645.2:c.2133C>G","XP_008191645.2:p.Asp711Glu","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[270,"NC_007418.3",8807527,"SNV","T","G","Homozygous",22,22,100,1,12,12,0.5,36,24,24,10,13,null,1,1,"no","G/G","No",1,86.11,"XP_008191645.2:c.1401A>C","XP_008191645.2:p.Gln467His","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[271,"NC_007418.3",8807549,"SNV","A","G","Homozygous",20,20,100,1,10,13,0.43,35.8,23,23,11,11,null,1,1,"no","G/G","No",1,80.1,"XP_008191645.2:c.1379T>C","XP_008191645.2:p.Phe460Ser","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[272,"NC_007418.3","9126248^9126249","Insertion","-","ATA","Homozygous",20,20,100,1,5,16,0.24,38.48,21,21,13,14,null,1,1,"no","ATA/ATA","No",1,200,"XP_015833339.1:c.[364_365insTAT]; XP_008192138.1:c.[1350+274_1350+275insATA]; XP_008192125.1:c.[1350+274_1350+275insATA]; XP_008192132.1:c.[1350+274_1350+275insATA]; XP_008192144.1:c.[1335+274_1335+275insATA]; XP_008192114.1:c.[1350+274_1350+275insATA]","XP_015833339.1:p.Val121_Ser122insLeu","LOC100141866, LOC107397509","100141866 , 107397509",null,"100141866 [Gene Symbol: LOC100141866] [Locus Tag: TcasGA2_TC003616] [Chromosome: LG3] [Map Location: ] [Description: protein tramtrack, alpha isoform] [Gene Type: protein-coding] || 107397509 [Gene Symbol: LOC107397509] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397509] [Gene Type: protein-coding]","LOC100141866; TcasGA2_TC003616 || LOC107397509"]
[273,"NC_007418.3","9292583..9292584","MNV","TT","CC","Homozygous",20,20,100,1,4,18,0.18,37.75,22,22,13,17,null,1,1,"no","CC/CC","No",1,200,"XP_008192271.1:c.1223_1224delAAinsGG","XP_008192271.1:p.Gln408Arg","LOC100141585",100141585,null,"100141585 [Gene Symbol: LOC100141585] [Locus Tag: TcasGA2_TC030754] [Chromosome: LG3] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC100141585; TcasGA2_TC030754"]
[274,"NC_007418.3",9638798,"SNV","T","C","Homozygous",26,26,100,1,18,15,0.45,37.62,33,33,15,18,null,1,1,"no","C/C","No",1,98.15,"XP_008192366.1:c.[3293A>G]; XP_015833405.1:c.[3293A>G]; XP_015833406.1:c.[2690A>G]; XP_008192372.1:c.[3293A>G]","XP_008192366.1:p.[Asp1098Gly]; XP_015833405.1:p.[Asp1098Gly]; XP_015833406.1:p.[Asp897Gly]; XP_008192372.1:p.[Asp1098Gly]","LOC659912",659912,null,"659912 [Gene Symbol: LOC659912] [Locus Tag: TcasGA2_TC002804] [Chromosome: LG3] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","LOC659912; TcasGA2_TC002804"]
[275,"NC_007418.3",9746250,"SNV","A","T","Homozygous",20,20,100,1,3,17,0.15,36.4,20,20,10,12,null,1,1,"no","T/T","No",1,81.7,"XP_008192389.1:c.260T>A","XP_008192389.1:p.Leu87His","LOC103312734",103312734,null,"103312734 [Gene Symbol: LOC103312734] [Locus Tag: TcasGA2_TC002799] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312734] [Gene Type: protein-coding]","LOC103312734; TcasGA2_TC002799"]
[276,"NC_007418.3",10573895,"SNV","C","T","Homozygous",27,27,100,1,10,18,0.36,36.52,28,28,13,14,null,1,1,"no","T/T","No",1,99.75,"XP_972784.2:c.34C>T","XP_972784.2:p.Leu12Phe","LOC103312803, LOC661540","103312803 , 661540",null,"103312803 [Gene Symbol: LOC103312803] [Locus Tag: TcasGA2_TC002783] [Chromosome: LG3] [Map Location: ] [Description: early growth response protein 1] [Gene Type: protein-coding] || 661540 [Gene Symbol: LOC661540] [Locus Tag: TcasGA2_TC003648] [Chromosome: LG3] [Map Location: ] [Description: syntaxin-17] [Gene Type: protein-coding]","TcasGA2_TC002783; LOC103312803 || TcasGA2_TC003648; LOC661540"]
[277,"NC_007418.3",10704490,"SNV","C","T","Homozygous",21,21,100,1,10,15,0.4,36.43,25,25,13,13,null,1,1,"no","T/T","No",1,84.7,"XP_972452.1:c.619C>T","XP_972452.1:p.Pro207Ser","LOC661180",661180,null,"661180 [Gene Symbol: LOC661180] [Locus Tag: TcasGA2_TC000042] [Chromosome: LG3] [Map Location: ] [Description: probable glutamine--tRNA ligase] [Gene Type: protein-coding]","LOC661180; TcasGA2_TC000042"]
[278,"NC_007418.3",10732268,"SNV","C","T","Heterozygous",5,23,21.74,0.95,5,0,0,39.6,5,26,4,4,-1.16,0.27,0.22,"no","C/T","No",1,12.64,"XP_008199567.1:c.223G>A","XP_008199567.1:p.Val75Ile","LOC103314697",103314697,null,"103314697 [Gene Symbol: LOC103314697] [Locus Tag: TcasGA2_TC000135] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314697] [Gene Type: protein-coding]","LOC103314697; TcasGA2_TC000135"]
[279,"NC_007418.3","10732270..10732272","MNV","TCT","AGA","Heterozygous",5,23,21.74,1,5,0,0,39.13,5,26,4,4,-1.68,0.43,0.22,"no","complex","No",1,200,"XP_008199567.1:c.219_221delAGAinsTCT","XP_008199567.1:p.Lys73_Asp74delinsAsnLeu","LOC103314697",103314697,null,"103314697 [Gene Symbol: LOC103314697] [Locus Tag: TcasGA2_TC000135] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314697] [Gene Type: protein-coding]","LOC103314697; TcasGA2_TC000135"]
[280,"NC_007418.3",10732367,"SNV","C","T","Heterozygous",6,23,26.09,1,2,6,0.25,40.17,8,30,5,4,1.47,0.04,0.59,"no","C/T","No",1,25.11,"XP_008199567.1:c.124G>A","XP_008199567.1:p.Gly42Ser","LOC103314697",103314697,null,"103314697 [Gene Symbol: LOC103314697] [Locus Tag: TcasGA2_TC000135] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314697] [Gene Type: protein-coding]","LOC103314697; TcasGA2_TC000135"]
[281,"NC_007418.3",10732382,"SNV","C","A","Heterozygous",7,23,30.43,1,4,4,0.5,37.29,8,30,5,5,-0.6,0.41,1,"no","A/C","No",1,34.29,"XP_008199567.1:c.109G>T","XP_008199567.1:p.Val37Phe","LOC103314697",103314697,null,"103314697 [Gene Symbol: LOC103314697] [Locus Tag: TcasGA2_TC000135] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314697] [Gene Type: protein-coding]","LOC103314697; TcasGA2_TC000135"]
[282,"NC_007418.3",10854680,"SNV","A","G","Homozygous",22,22,100,1,13,13,0.5,38.5,26,26,12,14,null,1,1,"no","G/G","No",1,86.11,"XP_970625.1:c.835A>G","XP_970625.1:p.Asn279Asp","LOC659205",659205,null,"659205 [Gene Symbol: LOC659205] [Locus Tag: TcasGA2_TC000060] [Chromosome: LG3] [Map Location: ] [Description: tRNA dimethylallyltransferase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC000060; LOC659205"]
[283,"NC_007418.3",10978803,"SNV","G","A","Homozygous",21,21,100,1,10,13,0.43,38.81,23,23,10,12,null,1,1,"no","A/A","No",1,84.7,"XP_970014.1:c.236C>T","XP_970014.1:p.Ser79Leu","LOC658539",658539,null,"658539 [Gene Symbol: LOC658539] [Locus Tag: TcasGA2_TC000114] [Chromosome: LG3] [Map Location: ] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC000114; LOC658539"]
[284,"NC_007418.3",11049678,"SNV","T","G","Homozygous",20,20,100,1,15,10,0.4,37.95,25,25,13,16,null,1,1,"no","G/G","No",1,80.09,"XP_008199533.1:c.407A>C","XP_008199533.1:p.Asn136Thr","LOC657918",657918,null,"657918 [Gene Symbol: LOC657918] [Locus Tag: TcasGA2_TC000110] [Chromosome: LG3] [Map Location: ] [Description: transcription termination factor 2] [Gene Type: protein-coding]","TcasGA2_TC000110; LOC657918"]
[285,"NC_007418.3",11170866,"SNV","G","C","Heterozygous",10,25,40,1,8,3,0.27,38.8,11,28,7,7,1.61,0.34,0.37,"no","C/G","No",1,70.5,"XP_015833486.1:c.[50-9604C>G]; XP_015833482.1:c.[50-9604C>G]; XP_008199525.1:c.[50-9604C>G]; XP_015833483.1:c.[50-9604C>G]; XP_015833487.1:c.[50-9604C>G]; XP_015833473.1:c.[1855G>C]; XP_008199522.1:c.[50-9604C>G]; XP_015833484.1:c.[50-9604C>G]; XP_015833485.1:c.[50-9604C>G]; XP_008199524.1:c.[50-9604C>G]","XP_015833473.1:p.Val619Leu","LOC657135, LOC103312144","657135 , 103312144",null,"657135 [Gene Symbol: LOC657135] [Locus Tag: TcasGA2_TC000103] [Chromosome: LG3] [Map Location: ] [Description: serine/threonine-protein phosphatase 2B catalytic subunit 2] [Gene Type: protein-coding] || 103312144 [Gene Symbol: LOC103312144] [Locus Tag: TcasGA2_TC000071] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312144] [Gene Type: protein-coding]","TcasGA2_TC000103; LOC657135 || LOC103312144; TcasGA2_TC000071"]
[286,"NC_007418.3",11493509,"SNV","T","C","Homozygous",21,21,100,1,6,17,0.26,37.52,23,23,11,16,null,1,1,"no","C/C","No",1,83.11,"XP_008199507.1:c.2480A>G","XP_008199507.1:p.Asn827Ser","LOC100141909",100141909,null,"100141909 [Gene Symbol: LOC100141909] [Locus Tag: TcasGA2_TC000086] [Chromosome: LG3] [Map Location: ] [Description: fibrillin-2] [Gene Type: protein-coding]","LOC100141909; TcasGA2_TC000086"]
[287,"NC_007418.3",11493574,"SNV","G","T","Homozygous",22,22,100,1,16,9,0.36,37.5,25,25,9,15,null,1,1,"no","T/T","No",1,87.71,"XP_008199507.1:c.2415C>A","XP_008199507.1:p.Asp805Glu","LOC100141909",100141909,null,"100141909 [Gene Symbol: LOC100141909] [Locus Tag: TcasGA2_TC000086] [Chromosome: LG3] [Map Location: ] [Description: fibrillin-2] [Gene Type: protein-coding]","LOC100141909; TcasGA2_TC000086"]
[288,"NC_007418.3",11493643,"SNV","A","T","Homozygous",22,22,100,1,13,12,0.48,36.91,25,25,16,16,null,1,1,"no","T/T","No",1,87.71,"XP_008199507.1:c.2346T>A","XP_008199507.1:p.Ser782Arg","LOC100141909",100141909,null,"100141909 [Gene Symbol: LOC100141909] [Locus Tag: TcasGA2_TC000086] [Chromosome: LG3] [Map Location: ] [Description: fibrillin-2] [Gene Type: protein-coding]","LOC100141909; TcasGA2_TC000086"]
[289,"NC_007418.3",11494060,"SNV","T","A","Homozygous",21,21,100,1,9,14,0.39,37.38,23,23,14,15,null,1,1,"no","A/A","No",1,84.7,"XP_008199507.1:c.1929A>T","XP_008199507.1:p.Glu643Asp","LOC100141909",100141909,null,"100141909 [Gene Symbol: LOC100141909] [Locus Tag: TcasGA2_TC000086] [Chromosome: LG3] [Map Location: ] [Description: fibrillin-2] [Gene Type: protein-coding]","LOC100141909; TcasGA2_TC000086"]
[290,"NC_007418.3",11515803,"SNV","T","C","Homozygous",21,21,100,1,7,14,0.33,35.29,21,21,12,12,null,1,1,"no","C/C","No",1,83.12,"NP_001153712.1:c.1150T>C","NP_001153712.1:p.*384Arg","LOC655157",655157,"catalase-like","655157 [Gene Symbol: LOC655157] [Locus Tag: TcasGA2_TC034503] [Chromosome: LG3] [Map Location: ] [Description: catalase-like] [Gene Type: protein-coding]","TcasGA2_TC034503; LOC655157"]
[291,"NC_007418.3",11927918,"SNV","T","C","Heterozygous",7,22,31.82,1,5,5,0.5,38.57,10,28,5,5,1.62,0.73,0.86,"no","C/T","No",1,41.85,"XP_015833604.1:c.101T>C","XP_015833604.1:p.Val34Ala","LOC107397543",107397543,null,"107397543 [Gene Symbol: LOC107397543] [Locus Tag: TcasGA2_TC003662] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397543] [Gene Type: protein-coding]","TcasGA2_TC003662; LOC107397543"]
[292,"NC_007418.3",12172229,"SNV","A","G","Homozygous",26,26,100,1,7,19,0.27,37.65,26,26,12,15,null,1,1,"no","G/G","No",1,98.15,"XP_967967.1:c.526A>G","XP_967967.1:p.Lys176Glu","LOC656335",656335,null,"656335 [Gene Symbol: LOC656335] [Locus Tag: TcasGA2_TC003671] [Chromosome: LG3] [Map Location: ] [Description: probable DNA-3-methyladenine glycosylase] [Gene Type: protein-coding]","TcasGA2_TC003671; LOC656335"]
[293,"NC_007418.3",12172247,"SNV","T","A","Homozygous",24,24,100,1,4,20,0.17,37.62,24,24,10,12,null,1,1,"no","A/A","No",1,93.72,"XP_967967.1:c.544T>A","XP_967967.1:p.Cys182Ser","LOC656335",656335,null,"656335 [Gene Symbol: LOC656335] [Locus Tag: TcasGA2_TC003671] [Chromosome: LG3] [Map Location: ] [Description: probable DNA-3-methyladenine glycosylase] [Gene Type: protein-coding]","TcasGA2_TC003671; LOC656335"]
[294,"NC_007418.3",12961877,"SNV","C","T","Heterozygous",10,26,38.46,1,10,0,0,36.2,10,30,3,8,1.19,0.02,0.13,"no","C/T","No",1,70.55,"XP_008191127.1:c.[622G>A]; XP_015833615.1:c.[622G>A]; XP_008191129.1:c.[622G>A]; XP_008191135.1:c.[322G>A]; XP_008191132.1:c.[298G>A]; XP_008191131.1:c.[301G>A]; XP_008191128.1:c.[622G>A]","XP_008191127.1:p.[Gly208Ser]; XP_015833615.1:p.[Gly208Ser]; XP_008191129.1:p.[Gly208Ser]; XP_008191135.1:p.[Gly108Ser]; XP_008191132.1:p.[Gly100Ser]; XP_008191131.1:p.[Gly101Ser]; XP_008191128.1:p.[Gly208Ser]","LOC659574",659574,null,"659574 [Gene Symbol: LOC659574] [Locus Tag: TcasGA2_TC002730] [Chromosome: LG3] [Map Location: ] [Description: caskin-1] [Gene Type: protein-coding]","TcasGA2_TC002730; LOC659574"]
[295,"NC_007418.3",13294324,"SNV","A","G","Homozygous",18,21,85.71,0.84,18,2,0.1,37.33,20,25,11,13,null,0.83,0.77,"no","G/G","No",1,8.07,"XP_008191141.1:c.7249T>C","XP_008191141.1:p.Phe2417Leu","LOC660035",660035,null,"660035 [Gene Symbol: LOC660035] [Locus Tag: TcasGA2_TC002723] [Chromosome: LG3] [Map Location: ] [Description: filamin-A] [Gene Type: protein-coding]","TcasGA2_TC002723; LOC660035"]
[296,"NC_007418.3",13594418,"SNV","T","C","Homozygous",20,20,100,1,6,18,0.25,36.8,24,24,9,11,null,1,1,"no","C/C","No",1,80.12,"XP_967066.1:c.1102A>G","XP_967066.1:p.Ile368Val","LOC655428",655428,null,"655428 [Gene Symbol: LOC655428] [Locus Tag: TcasGA2_TC002712] [Chromosome: LG3] [Map Location: ] [Description: nudC domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC002712; LOC655428"]
[297,"NC_007418.3",13594422,"SNV","G","T","Homozygous",21,21,100,1,7,17,0.29,37.1,24,24,11,13,null,1,1,"no","T/T","No",1,81.7,"XP_967066.1:c.1098C>A","XP_967066.1:p.Ser366Arg","LOC655428",655428,null,"655428 [Gene Symbol: LOC655428] [Locus Tag: TcasGA2_TC002712] [Chromosome: LG3] [Map Location: ] [Description: nudC domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC002712; LOC655428"]
[298,"NC_007418.3",13594484,"SNV","G","C","Homozygous",20,20,100,1,5,16,0.24,38.1,21,21,14,12,null,1,1,"no","C/C","No",1,80.11,"XP_967066.1:c.1036C>G","XP_967066.1:p.Pro346Ala","LOC655428",655428,null,"655428 [Gene Symbol: LOC655428] [Locus Tag: TcasGA2_TC002712] [Chromosome: LG3] [Map Location: ] [Description: nudC domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC002712; LOC655428"]
[299,"NC_007418.3","14026713..14026714","MNV","TT","CC","Heterozygous",8,22,36.36,1,5,3,0.38,39.62,8,22,5,6,0.55,0.77,0.72,"yes","complex","No",1,200,"XP_015833646.1:c.[1280_1281delTTinsCC]; XP_015833649.1:c.[53-9902_53-9901delAAinsGG]; XP_015833647.1:c.[1280_1281delTTinsCC]; XP_015833650.1:c.[53-9992_53-9991delAAinsGG]; XP_015833641.1:c.[1280_1281delTTinsCC]; XP_008191171.1:c.[126+2733_126+2734delTTinsCC]; XP_015833643.1:c.[1280_1281delTTinsCC]; XP_015833642.1:c.[1280_1281delTTinsCC]; XP_015833640.1:c.[1280_1281delTTinsCC]; XP_015833645.1:c.[1280_1281delTTinsCC]; XP_015833644.1:c.[1280_1281delTTinsCC]","XP_015833646.1:p.[Ile427Thr]; XP_015833647.1:p.[Ile427Thr]; XP_015833641.1:p.[Ile427Thr]; XP_015833643.1:p.[Ile427Thr]; XP_015833642.1:p.[Ile427Thr]; XP_015833640.1:p.[Ile427Thr]; XP_015833645.1:p.[Ile427Thr]; XP_015833644.1:p.[Ile427Thr]","LOC656062, LOC656669, LOC103312407","656062 , 656669 , 103312407",null,"656062 [Gene Symbol: LOC656062] [Locus Tag: TcasGA2_TC002698] [Chromosome: LG3] [Map Location: ] [Description: thioredoxin reductase 1, mitochondrial] [Gene Type: protein-coding] || 656669 [Gene Symbol: LOC656669] [Locus Tag: TcasGA2_TC003732] [Chromosome: LG3] [Map Location: ] [Description: C-factor] [Gene Type: protein-coding] || 103312407 [Gene Symbol: LOC103312407] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312407] [Gene Type: protein-coding]","LOC656062; TcasGA2_TC002698 || TcasGA2_TC003732; LOC656669 || LOC103312407"]
[300,"NC_007418.3",14026876,"SNV","A","T","Heterozygous",6,21,28.57,1,3,3,0.5,40.5,6,22,4,4,-0.39,0.2,0.68,"no","A/T","No",1,30.72,"XP_015833645.1:c.[1443A>T]; XP_015833650.1:c.[53-10154T>A]; XP_008191171.1:c.[126+2896A>T]; XP_015833649.1:c.[53-10064T>A]; XP_015833644.1:c.[1443A>T]; XP_015833640.1:c.[1443A>T]; XP_015833641.1:c.[1443A>T]; XP_015833642.1:c.[1443A>T]; XP_015833647.1:c.[1443A>T]; XP_015833643.1:c.[1443A>T]; XP_015833646.1:c.[1443A>T]","XP_015833645.1:p.[Lys481Asn]; XP_015833644.1:p.[Lys481Asn]; XP_015833640.1:p.[Lys481Asn]; XP_015833641.1:p.[Lys481Asn]; XP_015833642.1:p.[Lys481Asn]; XP_015833647.1:p.[Lys481Asn]; XP_015833643.1:p.[Lys481Asn]; XP_015833646.1:p.[Lys481Asn]","LOC656062, LOC656669, LOC103312407","656062 , 656669 , 103312407",null,"656062 [Gene Symbol: LOC656062] [Locus Tag: TcasGA2_TC002698] [Chromosome: LG3] [Map Location: ] [Description: thioredoxin reductase 1, mitochondrial] [Gene Type: protein-coding] || 656669 [Gene Symbol: LOC656669] [Locus Tag: TcasGA2_TC003732] [Chromosome: LG3] [Map Location: ] [Description: C-factor] [Gene Type: protein-coding] || 103312407 [Gene Symbol: LOC103312407] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312407] [Gene Type: protein-coding]","LOC656062; TcasGA2_TC002698 || TcasGA2_TC003732; LOC656669 || LOC103312407"]
[301,"NC_007418.3",14026882,"SNV","T","G","Heterozygous",8,21,38.1,1,0,8,0,39.62,8,24,4,5,0.04,0.2,0.31,"no","G/T","No",1,56.82,"XP_015833643.1:c.[1449T>G]; XP_015833642.1:c.[1449T>G]; XP_015833641.1:c.[1449T>G]; XP_015833646.1:c.[1449T>G]; XP_015833640.1:c.[1449T>G]; XP_015833650.1:c.[53-10160A>C]; XP_008191171.1:c.[126+2902T>G]; XP_015833644.1:c.[1449T>G]; XP_015833649.1:c.[53-10070A>C]; XP_015833647.1:c.[1449T>G]; XP_015833645.1:c.[1449T>G]","XP_015833643.1:p.[Asp483Glu]; XP_015833642.1:p.[Asp483Glu]; XP_015833641.1:p.[Asp483Glu]; XP_015833646.1:p.[Asp483Glu]; XP_015833640.1:p.[Asp483Glu]; XP_015833644.1:p.[Asp483Glu]; XP_015833647.1:p.[Asp483Glu]; XP_015833645.1:p.[Asp483Glu]","LOC656062, LOC656669, LOC103312407","656062 , 656669 , 103312407",null,"656062 [Gene Symbol: LOC656062] [Locus Tag: TcasGA2_TC002698] [Chromosome: LG3] [Map Location: ] [Description: thioredoxin reductase 1, mitochondrial] [Gene Type: protein-coding] || 656669 [Gene Symbol: LOC656669] [Locus Tag: TcasGA2_TC003732] [Chromosome: LG3] [Map Location: ] [Description: C-factor] [Gene Type: protein-coding] || 103312407 [Gene Symbol: LOC103312407] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312407] [Gene Type: protein-coding]","LOC656062; TcasGA2_TC002698 || TcasGA2_TC003732; LOC656669 || LOC103312407"]
[302,"NC_007418.3",14027084,"SNV","G","A","Heterozygous",14,20,70,1,6,10,0.38,38.79,16,26,10,10,0.21,0.84,0.97,"no","A/G","No",1,34.54,"XP_015833642.1:c.[1651G>A]; XP_015833649.1:c.[53-10272C>T]; XP_015833647.1:c.[1651G>A]; XP_008191171.1:c.[126+3104G>A]; XP_015833646.1:c.[1651G>A]; XP_015833645.1:c.[1651G>A]; XP_015833641.1:c.[1651G>A]; XP_015833650.1:c.[53-10362C>T]; XP_015833640.1:c.[1651G>A]; XP_015833643.1:c.[1651G>A]; XP_015833644.1:c.[1651G>A]","XP_015833642.1:p.[Ala551Thr]; XP_015833647.1:p.[Ala551Thr]; XP_015833646.1:p.[Ala551Thr]; XP_015833645.1:p.[Ala551Thr]; XP_015833641.1:p.[Ala551Thr]; XP_015833640.1:p.[Ala551Thr]; XP_015833643.1:p.[Ala551Thr]; XP_015833644.1:p.[Ala551Thr]","LOC656062, LOC656669, LOC103312407","656062 , 656669 , 103312407",null,"656062 [Gene Symbol: LOC656062] [Locus Tag: TcasGA2_TC002698] [Chromosome: LG3] [Map Location: ] [Description: thioredoxin reductase 1, mitochondrial] [Gene Type: protein-coding] || 656669 [Gene Symbol: LOC656669] [Locus Tag: TcasGA2_TC003732] [Chromosome: LG3] [Map Location: ] [Description: C-factor] [Gene Type: protein-coding] || 103312407 [Gene Symbol: LOC103312407] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312407] [Gene Type: protein-coding]","LOC656062; TcasGA2_TC002698 || TcasGA2_TC003732; LOC656669 || LOC103312407"]
[303,"NC_007418.3",14122782,"SNV","G","A","Heterozygous",11,20,55,1,2,9,0.18,38.64,11,22,6,7,-0.61,0.39,0.44,"no","A/G","No",1,72.77,"XP_015833636.1:c.820G>A","XP_015833636.1:p.Gly274Arg","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[304,"NC_007418.3",14372125,"SNV","G","C","Homozygous",22,22,100,1,14,9,0.39,39.64,23,23,12,14,null,1,1,"no","C/C","No",1,86.13,"XP_015833657.1:c.301G>C","XP_015833657.1:p.Val101Leu","LOC658029",658029,null,"658029 [Gene Symbol: LOC658029] [Locus Tag: TcasGA2_TC032509] [Chromosome: LG3] [Map Location: ] [Description: cytochrome P450 6k1] [Gene Type: protein-coding]","LOC658029; CYP345D2; TcasGA2_TC032509"]
[305,"NC_007418.3","14372155..14372156","MNV","TT","GC","Heterozygous",5,20,25,1,3,2,0.4,36.3,5,23,3,5,0.3,0.13,0.89,"no","complex","No",1,200,"XP_015833657.1:c.331_332delTTinsGC","XP_015833657.1:p.Phe111Ala","LOC658029",658029,null,"658029 [Gene Symbol: LOC658029] [Locus Tag: TcasGA2_TC032509] [Chromosome: LG3] [Map Location: ] [Description: cytochrome P450 6k1] [Gene Type: protein-coding]","LOC658029; CYP345D2; TcasGA2_TC032509"]
[306,"NC_007418.3",14382912,"SNV","A","G","Heterozygous",23,30,76.67,0.99,21,3,0.12,38.65,24,31,13,16,-2.21,0.95,0.98,"no","A/G","No",1,18.51,"XP_008190375.2:c.370A>G","XP_008190375.2:p.Ile124Val","LOC103312175",103312175,null,"103312175 [Gene Symbol: LOC103312175] [Locus Tag: TcasGA2_TC032510] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312175] [Gene Type: protein-coding]","LOC103312175; TcasGA2_TC032510; Or327"]
[307,"NC_007418.3",14383198,"SNV","C","T","Heterozygous",14,22,63.64,1,5,12,0.29,38.43,17,26,10,12,1.13,0.89,0.97,"no","C/T","No",1,54.62,"XP_008190375.2:c.656C>T","XP_008190375.2:p.Ser219Leu","LOC103312175",103312175,null,"103312175 [Gene Symbol: LOC103312175] [Locus Tag: TcasGA2_TC032510] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312175] [Gene Type: protein-coding]","LOC103312175; TcasGA2_TC032510; Or327"]
[308,"NC_007418.3",14473908,"SNV","G","A","Heterozygous",11,23,47.83,1,8,6,0.43,35.27,14,30,5,8,-1.02,0.3,0.98,"no","A/G","No",1,88.71,"XP_008199271.1:c.482C>T","XP_008199271.1:p.Ala161Val","LOC655963",655963,null,"655963 [Gene Symbol: LOC655963] [Locus Tag: TcasGA2_TC010521] [Chromosome: LG3] [Map Location: ] [Description: probable palmitoyltransferase ZDHHC1] [Gene Type: protein-coding]","TcasGA2_TC010521; LOC655963"]
[309,"NC_007418.3",14923401,"SNV","T","C","Homozygous",22,23,95.65,1,14,9,0.39,38.82,23,24,16,15,null,1,1,"no","C/C","No",1,61.21,"XP_968632.1:c.[1067T>C]; XP_008199234.1:c.[158T>C]","XP_968632.1:p.[Leu356Ser]; XP_008199234.1:p.[Leu53Ser]","LOC657051",657051,null,"657051 [Gene Symbol: LOC657051] [Locus Tag: TcasGA2_TC010540] [Chromosome: LG3] [Map Location: ] [Description: laminin subunit gamma-1] [Gene Type: protein-coding]","LOC657051; TcasGA2_TC010540"]
[310,"NC_007418.3","15070095..15070096","Deletion","CC","-","Heterozygous",19,40,47.5,1,14,5,0.26,31.16,19,45,12,13,-2.14,0.1,0.81,"no","complex","Yes",10,200,"XP_008199236.2:c.[920_921delGG]; XP_015833669.1:c.[920_921delGG]; XP_015833666.1:c.[920_921delGG]; XP_008199243.1:c.[1715-7274_1715-7273delCC]; XP_008199240.1:c.[1715-7274_1715-7273delCC]; XP_015833667.1:c.[920_921delGG]; XP_008199244.1:c.[1715-7274_1715-7273delCC]; XP_008199241.1:c.[1715-7274_1715-7273delCC]; XP_008199242.1:c.[1715-7274_1715-7273delCC]; XP_008199245.1:c.[86-7274_86-7273delCC]; XP_015833670.1:c.[920_921delGG]; XP_015833665.1:c.[152-7274_152-7273delCC]; XP_008199246.1:c.[1715-7274_1715-7273delCC]; XP_008199239.2:c.[854_855delGG]","XP_008199236.2:p.[Gly307fs]; XP_015833669.1:p.[Gly307fs]; XP_015833666.1:p.[Gly307fs]; XP_015833667.1:p.[Gly307fs]; XP_015833670.1:p.[Gly307fs]; XP_008199239.2:p.[Gly285fs]","LOC657292, LOC103314596","657292 , 103314596",null,"657292 [Gene Symbol: LOC657292] [Locus Tag: TcasGA2_TC010542] [Chromosome: LG3] [Map Location: ] [Description: disco-interacting protein 2] [Gene Type: protein-coding] || 103314596 [Gene Symbol: LOC103314596] [Locus Tag: TcasGA2_TC010509] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314596] [Gene Type: protein-coding]","LOC657292; TcasGA2_TC010542 || LOC103314596; TcasGA2_TC010509"]
[311,"NC_007418.3",15070145,"SNV","C","A","Heterozygous",10,26,38.46,1,1,10,0.09,39.6,11,27,5,4,1.69,{"v":0.00557,"d":"5.57E-03"},0.09,"no","A/C","No",1,64.15,"XP_008199242.1:c.[1715-7224C>A]; XP_015833667.1:c.[871G>T]; XP_008199245.1:c.[86-7224C>A]; XP_008199246.1:c.[1715-7224C>A]; XP_015833666.1:c.[871G>T]; XP_015833670.1:c.[871G>T]; XP_015833665.1:c.[152-7224C>A]; XP_008199241.1:c.[1715-7224C>A]; XP_008199239.2:c.[805G>T]; XP_008199244.1:c.[1715-7224C>A]; XP_015833669.1:c.[871G>T]; XP_008199240.1:c.[1715-7224C>A]; XP_008199243.1:c.[1715-7224C>A]; XP_008199236.2:c.[871G>T]","XP_015833667.1:p.[Gly291Cys]; XP_015833666.1:p.[Gly291Cys]; XP_015833670.1:p.[Gly291Cys]; XP_008199239.2:p.[Gly269Cys]; XP_015833669.1:p.[Gly291Cys]; XP_008199236.2:p.[Gly291Cys]","LOC657292, LOC103314596","657292 , 103314596",null,"657292 [Gene Symbol: LOC657292] [Locus Tag: TcasGA2_TC010542] [Chromosome: LG3] [Map Location: ] [Description: disco-interacting protein 2] [Gene Type: protein-coding] || 103314596 [Gene Symbol: LOC103314596] [Locus Tag: TcasGA2_TC010509] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314596] [Gene Type: protein-coding]","LOC657292; TcasGA2_TC010542 || LOC103314596; TcasGA2_TC010509"]
[312,"NC_007418.3",15070634,"SNV","T","A","Heterozygous",6,28,21.43,0.93,1,5,0.17,39.67,6,33,4,5,2.02,0.31,0.39,"no","A/T","No",1,11.42,"XP_015833665.1:c.[152-6735T>A]; XP_008199242.1:c.[1715-6735T>A]; XP_008199240.1:c.[1715-6735T>A]; XP_008199245.1:c.[86-6735T>A]; XP_015833670.1:c.[382A>T]; XP_015833666.1:c.[382A>T]; XP_008199239.2:c.[382A>T]; XP_015833669.1:c.[382A>T]; XP_008199244.1:c.[1715-6735T>A]; XP_008199243.1:c.[1715-6735T>A]; XP_008199236.2:c.[382A>T]; XP_008199246.1:c.[1715-6735T>A]; XP_008199241.1:c.[1715-6735T>A]; XP_015833667.1:c.[382A>T]","XP_015833670.1:p.[Thr128Ser]; XP_015833666.1:p.[Thr128Ser]; XP_008199239.2:p.[Thr128Ser]; XP_015833669.1:p.[Thr128Ser]; XP_008199236.2:p.[Thr128Ser]; XP_015833667.1:p.[Thr128Ser]","LOC657292, LOC103314596","657292 , 103314596",null,"657292 [Gene Symbol: LOC657292] [Locus Tag: TcasGA2_TC010542] [Chromosome: LG3] [Map Location: ] [Description: disco-interacting protein 2] [Gene Type: protein-coding] || 103314596 [Gene Symbol: LOC103314596] [Locus Tag: TcasGA2_TC010509] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314596] [Gene Type: protein-coding]","LOC657292; TcasGA2_TC010542 || LOC103314596; TcasGA2_TC010509"]
[313,"NC_007418.3",15070648,"SNV","A","G","Heterozygous",18,23,78.26,0.95,11,11,0.5,38.44,22,28,13,14,0.34,0.9,1,"no","A/G","No",1,12.74,"XP_015833667.1:c.[368T>C]; XP_008199243.1:c.[1715-6721A>G]; XP_008199246.1:c.[1715-6721A>G]; XP_008199244.1:c.[1715-6721A>G]; XP_015833670.1:c.[368T>C]; XP_008199245.1:c.[86-6721A>G]; XP_008199240.1:c.[1715-6721A>G]; XP_015833669.1:c.[368T>C]; XP_008199236.2:c.[368T>C]; XP_015833665.1:c.[152-6721A>G]; XP_008199242.1:c.[1715-6721A>G]; XP_015833666.1:c.[368T>C]; XP_008199241.1:c.[1715-6721A>G]; XP_008199239.2:c.[368T>C]","XP_015833667.1:p.[Leu123Pro]; XP_015833670.1:p.[Leu123Pro]; XP_015833669.1:p.[Leu123Pro]; XP_008199236.2:p.[Leu123Pro]; XP_015833666.1:p.[Leu123Pro]; XP_008199239.2:p.[Leu123Pro]","LOC657292, LOC103314596","657292 , 103314596",null,"657292 [Gene Symbol: LOC657292] [Locus Tag: TcasGA2_TC010542] [Chromosome: LG3] [Map Location: ] [Description: disco-interacting protein 2] [Gene Type: protein-coding] || 103314596 [Gene Symbol: LOC103314596] [Locus Tag: TcasGA2_TC010509] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314596] [Gene Type: protein-coding]","LOC657292; TcasGA2_TC010542 || LOC103314596; TcasGA2_TC010509"]
[314,"NC_007418.3",15660251,"SNV","A","G","Homozygous",23,23,100,1,6,17,0.26,37.78,23,23,11,11,null,1,1,"no","G/G","No",1,89.12,"XP_008199265.1:c.628A>G","XP_008199265.1:p.Lys210Glu","LOC103314602",103314602,null,"103314602 [Gene Symbol: LOC103314602] [Locus Tag: TcasGA2_TC010558] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314602; TcasGA2_TC010558"]
[315,"NC_007418.3",16928941,"SNV","C","T","Homozygous",23,23,100,1,15,14,0.48,35.7,29,29,9,14,null,1,1,"no","T/T","No",1,90.73,"XP_015833814.1:c.[5C>T]; XP_015833815.1:c.[5C>T]; XP_008191262.1:c.[5C>T]; XP_008191260.1:c.[5C>T]","XP_015833814.1:p.[Pro2Leu]; XP_015833815.1:p.[Pro2Leu]; XP_008191262.1:p.[Pro2Leu]; XP_008191260.1:p.[Pro2Leu]","LOC103312431",103312431,null,"103312431 [Gene Symbol: LOC103312431] [Locus Tag: TcasGA2_TC002650] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC002650; LOC103312431"]
[316,"NC_007418.3",17153563,"SNV","C","T","Heterozygous",14,31,45.16,1,13,3,0.19,39,16,33,8,9,-2.7,0.95,0.83,"no","C/T","No",1,104.66,"XP_015833782.1:c.362C>T","XP_015833782.1:p.Pro121Leu","LOC107397596",107397596,null,"107397596 [Gene Symbol: LOC107397596] [Locus Tag: TcasGA2_TC002657] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized protein K02A2.6-like] [Gene Type: protein-coding]","TcasGA2_TC002657; LOC107397596"]
[317,"NC_007418.3",17153588,"SNV","G","T","Heterozygous",16,33,48.48,1,12,6,0.33,38.31,18,39,10,10,-0.79,0.2,0.99,"no","G/T","No",1,121.26,"XP_015833782.1:c.387G>T","XP_015833782.1:p.Gln129His","LOC107397596",107397596,null,"107397596 [Gene Symbol: LOC107397596] [Locus Tag: TcasGA2_TC002657] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized protein K02A2.6-like] [Gene Type: protein-coding]","TcasGA2_TC002657; LOC107397596"]
[318,"NC_007418.3",17155333,"SNV","A","C","Heterozygous",7,22,31.82,1,4,4,0.5,38.57,8,24,5,7,0.7,0.66,0.98,"no","A/C","No",1,41.42,"XP_015833782.1:c.2132A>C","XP_015833782.1:p.Tyr711Ser","LOC107397596",107397596,null,"107397596 [Gene Symbol: LOC107397596] [Locus Tag: TcasGA2_TC002657] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized protein K02A2.6-like] [Gene Type: protein-coding]","TcasGA2_TC002657; LOC107397596"]
[319,"NC_007418.3",17584490,"SNV","C","T","Heterozygous",6,20,30,1,6,0,0,37.83,6,25,4,4,-1.07,0.19,0.3,"no","C/T","No",1,33.49,"XP_015833805.1:c.334C>T","XP_015833805.1:p.Leu112Phe","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[320,"NC_007418.3",17584595,"SNV","C","A","Heterozygous",17,31,54.84,1,8,13,0.38,38.71,21,36,11,12,-0.48,0.87,0.99,"no","A/C","No",1,105.78,"XP_015833805.1:c.439C>A","XP_015833805.1:p.Leu147Ile","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[321,"NC_007418.3","17584597..17584598","MNV","TC","CT","Heterozygous",7,31,22.58,1,4,4,0.5,40,8,36,6,6,null,0.41,0.99,"no","complex","No",1,200,"XP_015833805.1:c.441_442delTCinsCT","XP_015833805.1:p.Gln148*","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[322,"NC_007418.3",17584619,"SNV","A","C","Heterozygous",10,25,40,1,6,4,0.4,39.3,10,28,6,8,1.89,0.92,0.89,"no","A/C","No",1,71.4,"XP_015833805.1:c.463A>C","XP_015833805.1:p.Thr155Pro","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[323,"NC_007418.3",17584651,"SNV","A","T","Heterozygous",14,30,46.67,1,9,5,0.36,37.64,14,32,7,8,-0.85,0.58,0.92,"no","A/T","No",1,107.79,"XP_015833805.1:c.495A>T","XP_015833805.1:p.Leu165Phe","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[324,"NC_007418.3",17584656,"SNV","C","T","Heterozygous",7,27,25.93,1,2,5,0.29,38.29,7,30,6,7,0.77,0.64,0.77,"no","complex","No",1,148.08,"XP_015833805.1:c.500C>T","XP_015833805.1:p.Ser167Phe","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[325,"NC_007418.3",17584684,"SNV","T","A","Heterozygous",15,25,60,1,8,9,0.47,39.33,17,27,7,7,-0.39,0.22,0.99,"no","A/T","No",1,70.64,"XP_015833805.1:c.528T>A","XP_015833805.1:p.Cys176*","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[326,"NC_007418.3",17584715,"SNV","A","G","Homozygous",26,26,100,1,15,13,0.46,38.31,28,28,13,16,null,1,1,"no","G/G","No",1,98.14,"XP_015833805.1:c.559A>G","XP_015833805.1:p.Lys187Glu","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[327,"NC_007418.3",17584819,"SNV","T","G","Heterozygous",21,28,75,0.99,11,11,0.5,39.19,22,29,10,13,1.22,0.99,1,"no","G/T","No",1,20.54,"XP_015833805.1:c.663T>G","XP_015833805.1:p.Phe221Leu","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[328,"NC_007418.3",17584984,"SNV","T","A","Heterozygous",7,28,25,1,6,4,0.4,38,10,31,5,5,-0.34,0.39,1,"no","A/T","No",1,23.87,"XP_015833805.1:c.828T>A","XP_015833805.1:p.Asp276Glu","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[329,"NC_007418.3",17902318,"SNV","G","T","Homozygous",25,25,100,1,11,14,0.44,37.76,25,25,14,20,null,1,1,"no","T/T","No",1,96.74,"XP_968591.1:c.64C>A","XP_968591.1:p.Gln22Lys","LOC657009",657009,null,"657009 [Gene Symbol: LOC657009] [Locus Tag: TcasGA2_TC003766] [Chromosome: LG3] [Map Location: ] [Description: ADP-ribosylation factor-like protein 6-interacting protein 4] [Gene Type: protein-coding]","LOC657009; TcasGA2_TC003766"]
[330,"NC_007418.3",17902320,"SNV","A","G","Homozygous",24,24,100,1,11,13,0.46,37.54,24,24,14,19,null,1,1,"no","G/G","No",1,92.13,"XP_968591.1:c.62T>C","XP_968591.1:p.Val21Ala","LOC657009",657009,null,"657009 [Gene Symbol: LOC657009] [Locus Tag: TcasGA2_TC003766] [Chromosome: LG3] [Map Location: ] [Description: ADP-ribosylation factor-like protein 6-interacting protein 4] [Gene Type: protein-coding]","LOC657009; TcasGA2_TC003766"]
[331,"NC_007418.3",17902330,"SNV","A","T","Homozygous",20,20,100,1,9,11,0.45,35.75,20,20,13,16,null,1,1,"no","T/T","No",1,81.69,"XP_968591.1:c.52T>A","XP_968591.1:p.Ser18Thr","LOC657009",657009,null,"657009 [Gene Symbol: LOC657009] [Locus Tag: TcasGA2_TC003766] [Chromosome: LG3] [Map Location: ] [Description: ADP-ribosylation factor-like protein 6-interacting protein 4] [Gene Type: protein-coding]","LOC657009; TcasGA2_TC003766"]
[332,"NC_007418.3",18433976,"SNV","G","T","Heterozygous",11,20,55,1,6,8,0.43,38.36,14,24,7,7,1.79,0.28,1,"no","G/T","No",1,72.31,"XP_008191203.1:c.[4639C>A]; XP_008191205.1:c.[4147C>A]; XP_008191204.1:c.[4708C>A]; XP_008191202.1:c.[4708C>A]","XP_008191203.1:p.[Leu1547Ile]; XP_008191205.1:p.[Leu1383Ile]; XP_008191204.1:p.[Leu1570Ile]; XP_008191202.1:p.[Leu1570Ile]","LOC103312419",103312419,null,"103312419 [Gene Symbol: LOC103312419] [Locus Tag: TcasGA2_TC003753] [Chromosome: LG3] [Map Location: ] [Description: maternal protein tudor] [Gene Type: protein-coding]","tud; LOC103312419; tudor; TcasGA2_TC003753"]
[333,"NC_007418.3",18444345,"SNV","C","T","Heterozygous",9,22,40.91,1,3,6,0.33,36.67,9,23,5,5,-0.73,0.94,0.51,"no","C/T","No",1,66.17,"XP_008191202.1:c.[1703G>A]; XP_008191203.1:c.[1703G>A]; XP_008191204.1:c.[1703G>A]; XP_008191205.1:c.[1142G>A]","XP_008191202.1:p.[Arg568Lys]; XP_008191203.1:p.[Arg568Lys]; XP_008191204.1:p.[Arg568Lys]; XP_008191205.1:p.[Arg381Lys]","LOC103312419",103312419,null,"103312419 [Gene Symbol: LOC103312419] [Locus Tag: TcasGA2_TC003753] [Chromosome: LG3] [Map Location: ] [Description: maternal protein tudor] [Gene Type: protein-coding]","tud; LOC103312419; tudor; TcasGA2_TC003753"]
[334,"NC_007418.3","18478156^18478157","Insertion","-","TGC","Homozygous",21,21,100,1,9,15,0.38,36.86,24,24,10,13,null,1,1,"no","TGC/TGC","No",1,200,"XP_015833722.1:c.[560_561insGCA]; XP_015833721.1:c.[503_504insGCA]; XP_015833720.1:c.[560_561insGCA]; XP_015833719.1:c.[560_561insGCA]","XP_015833722.1:p.[Gln192_Met193insGln]; XP_015833721.1:p.[Gln173_Met174insGln]; XP_015833720.1:p.[Gln192_Met193insGln]; XP_015833719.1:p.[Gln192_Met193insGln]","LOC655591, LOC655187","655591 , 655187",null,"655591 [Gene Symbol: LOC655591] [Locus Tag: TcasGA2_TC003752] [Chromosome: LG3] [Map Location: ] [Description: polyhomeotic] [Gene Type: protein-coding] || 655187 [Gene Symbol: LOC655187] [Locus Tag: TcasGA2_TC002688] [Chromosome: LG3] [Map Location: ] [Description: D-2-hydroxyglutarate dehydrogenase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC003752; ph; LOC655591 || LOC655187; TcasGA2_TC002688"]
[335,"NC_007418.3",18694558,"SNV","G","A","Heterozygous",12,22,54.55,1,7,5,0.42,39,12,22,5,9,1.29,0.69,1,"no","A/G","No",1,80,"XP_972555.3:c.13159C>T","XP_972555.3:p.Leu4387Phe","LOC661291",661291,null,"661291 [Gene Symbol: LOC661291] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: midasin] [Gene Type: protein-coding]","LOC661291; Mdn1"]
[336,"NC_007418.3",18694561,"SNV","C","T","Heterozygous",13,23,56.52,1,8,5,0.38,39.15,13,23,6,9,0.68,0.69,1,"no","C/T","No",1,77.38,"XP_972555.3:c.13156G>A","XP_972555.3:p.Asp4386Asn","LOC661291",661291,null,"661291 [Gene Symbol: LOC661291] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: midasin] [Gene Type: protein-coding]","LOC661291; Mdn1"]
[337,"NC_007418.3",18694567,"SNV","G","A","Heterozygous",12,22,54.55,1,7,5,0.42,39,12,22,6,8,-0.3,0.68,1,"no","A/G","No",1,80.01,"XP_972555.3:c.13150C>T","XP_972555.3:p.Pro4384Ser","LOC661291",661291,null,"661291 [Gene Symbol: LOC661291] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: midasin] [Gene Type: protein-coding]","LOC661291; Mdn1"]
[338,"NC_007418.3",18694623,"SNV","G","C","Heterozygous",10,22,45.45,1,7,3,0.3,38,10,23,7,9,1.19,0.36,0.52,"no","C/G","No",1,78.86,"XP_972555.3:c.13094C>G","XP_972555.3:p.Thr4365Ser","LOC661291",661291,null,"661291 [Gene Symbol: LOC661291] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: midasin] [Gene Type: protein-coding]","LOC661291; Mdn1"]
[339,"NC_007418.3",18888816,"SNV","C","G","Homozygous",21,21,100,1,12,12,0.5,37.14,24,24,12,13,null,1,1,"no","G/G","No",1,83.1,"XP_972302.1:c.609C>G","XP_972302.1:p.Asp203Glu","LOC661019",661019,null,"661019 [Gene Symbol: LOC661019] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: longitudinals lacking protein, isoforms H/M/V] [Gene Type: protein-coding]","LOC661019"]
[340,"NC_007418.3",19297727,"SNV","C","T","Heterozygous",13,24,54.17,1,11,3,0.21,37.69,14,28,7,9,0.43,0.7,1,"no","C/T","No",1,87.34,"XP_970835.1:c.1013C>T","XP_970835.1:p.Pro338Leu","LOC659438",659438,null,"659438 [Gene Symbol: LOC659438] [Locus Tag: TcasGA2_TC011192] [Chromosome: LG3] [Map Location: ] [Description: retinal dehydrogenase 1] [Gene Type: protein-coding]","TcasGA2_TC011192; LOC659438"]
[341,"NC_007418.3",19300220,"SNV","C","T","Heterozygous",16,21,76.19,0.99,0,16,0,37.94,16,22,7,7,-0.17,0.93,0.52,"no","C/T","No",1,19.2,"XP_970708.2:c.1328G>A","XP_970708.2:p.Arg443Lys","LOC659296",659296,null,"659296 [Gene Symbol: LOC659296] [Locus Tag: TcasGA2_TC011302] [Chromosome: LG3] [Map Location: ] [Description: YEATS domain-containing protein 2] [Gene Type: protein-coding]","TcasGA2_TC011302; LOC659296"]
[342,"NC_007418.3",19302587,"SNV","C","T","Heterozygous",16,21,76.19,0.99,6,10,0.38,38.25,16,24,9,11,2.11,0.92,1,"no","C/T","No",1,19.17,"XP_970708.2:c.364G>A","XP_970708.2:p.Val122Ile","LOC659296",659296,null,"659296 [Gene Symbol: LOC659296] [Locus Tag: TcasGA2_TC011302] [Chromosome: LG3] [Map Location: ] [Description: YEATS domain-containing protein 2] [Gene Type: protein-coding]","TcasGA2_TC011302; LOC659296"]
[343,"NC_007418.3",19304812,"SNV","A","T","Heterozygous",15,28,53.57,1,5,11,0.31,35.8,16,29,8,9,0.37,0.38,0.93,"no","A/T","No",1,100.32,"XP_970641.1:c.226A>T","XP_970641.1:p.Thr76Ser","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[344,"NC_007418.3",19304828,"SNV","G","A","Homozygous",25,25,100,1,18,13,0.42,37.16,31,31,16,19,null,1,1,"no","A/A","No",1,96.74,"XP_970641.1:c.242G>A","XP_970641.1:p.Ser81Asn","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[345,"NC_007418.3",19304888,"SNV","C","A","Heterozygous",10,25,40,1,5,5,0.5,38.2,10,26,7,8,-1.11,0.35,0.93,"no","A/C","No",1,66.98,"XP_970641.1:c.302C>A","XP_970641.1:p.Thr101Lys","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[346,"NC_007418.3",19304899,"SNV","C","A","Heterozygous",12,27,44.44,1,5,8,0.38,37.75,13,30,8,9,-0.32,0.69,0.99,"no","A/C","No",1,86.9,"XP_970641.1:c.313C>A","XP_970641.1:p.Leu105Ile","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[347,"NC_007418.3",19305047,"SNV","G","T","Heterozygous",6,27,22.22,0.92,0,6,0,39.83,6,29,2,2,1.05,0.29,0.22,"no","G/T","No",1,10.9,"XP_970641.1:c.461G>T","XP_970641.1:p.Gly154Val","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[348,"NC_007418.3",19308666,"SNV","C","G","Heterozygous",12,21,57.14,1,10,3,0.23,38.25,13,23,7,9,-0.28,0.85,0.97,"no","C/G","No",1,68.88,"XP_008194457.1:c.818C>G","XP_008194457.1:p.Pro273Arg","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[349,"NC_007418.3",19308671,"SNV","G","A","Heterozygous",13,21,61.9,1,11,3,0.21,39.23,14,23,8,10,-0.87,0.85,0.99,"no","A/G","No",1,57.24,"XP_008194457.1:c.823G>A","XP_008194457.1:p.Glu275Lys","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[350,"NC_007418.3",19309676,"SNV","G","C","Heterozygous",15,20,75,0.99,5,10,0.33,35.53,15,20,10,10,-1.4,0.72,0.99,"no","C/G","No",1,20.65,"XP_008194457.1:c.1584G>C","XP_008194457.1:p.Met528Ile","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[351,"NC_007418.3",19309701,"SNV","T","C","Heterozygous",17,26,65.38,1,3,14,0.18,37.71,17,26,12,12,-0.4,0.58,0.64,"no","C/T","No",1,54.94,"XP_008194457.1:c.1609T>C","XP_008194457.1:p.Phe537Leu","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[352,"NC_007418.3",19309728,"SNV","G","T","Heterozygous",16,29,55.17,1,3,13,0.19,37.62,16,29,8,12,0.22,0.7,0.46,"no","G/T","No",1,98.42,"XP_008194457.1:c.1636G>T","XP_008194457.1:p.Val546Leu","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[353,"NC_007418.3",19309850,"SNV","C","G","Heterozygous",12,22,54.55,1,6,8,0.43,39,14,26,8,9,-0.73,0.71,1,"no","C/G","No",1,78.85,"XP_008194457.1:c.1758C>G","XP_008194457.1:p.Asn586Lys","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[354,"NC_007418.3",19309852,"SNV","G","A","Heterozygous",17,24,70.83,1,8,13,0.38,39.06,21,28,11,13,0.16,0.79,1,"no","A/G","No",1,36.16,"XP_008194457.1:c.1760G>A","XP_008194457.1:p.Arg587Gln","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[355,"NC_007418.3",19309857,"SNV","C","G","Heterozygous",17,24,70.83,1,8,11,0.42,38.65,19,26,10,12,0.1,0.96,1,"no","C/G","No",1,40.54,"XP_008194457.1:c.1765C>G","XP_008194457.1:p.Arg589Gly","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[356,"NC_007418.3","19309863..19309864","MNV","GA","CC","Heterozygous",18,25,72,1,7,14,0.33,38.75,21,30,13,16,0.01,0.88,1,"no","complex","No",1,200,"XP_008194457.1:c.1771_1772delGAinsCC","XP_008194457.1:p.Glu591Pro","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[357,"NC_007418.3",19320293,"SNV","T","A","Heterozygous",21,27,77.78,0.96,12,9,0.43,37.19,21,29,9,12,0.55,0.82,1,"no","A/T","No",1,14.16,"XP_008194419.1:c.1588A>T","XP_008194419.1:p.Asn530Tyr","LOC103313283",103313283,null,"103313283 [Gene Symbol: LOC103313283] [Locus Tag: TcasGA2_TC031363] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313283] [Gene Type: protein-coding]","LOC103313283; TcasGA2_TC031363"]
[358,"NC_007418.3","19917236..19917237","MNV","AT","TC","Homozygous",25,25,100,1,14,11,0.44,38.55,25,25,9,16,null,1,1,"no","TC/TC","No",1,200,"XP_008193899.1:c.[1160_1161delATinsTC]; XP_967203.1:c.[1205_1206delATinsTC]","XP_008193899.1:p.[Tyr387Phe]; XP_967203.1:p.[Tyr402Phe]","LOC655557",655557,null,"655557 [Gene Symbol: LOC655557] [Locus Tag: TcasGA2_TC002133] [Chromosome: LG3] [Map Location: ] [Description: protein arginine N-methyltransferase 7] [Gene Type: protein-coding]","LOC655557; TcasGA2_TC002133"]
[359,"NC_007418.3",20303450,"Deletion","C","-","Heterozygous",5,20,25,0.99,1,4,0.2,38.6,5,20,4,4,0.35,0.63,0.7,"no","-/C","No",1,19.96,"XP_015833909.1:c.118delC","XP_015833909.1:p.Gln40fs","LOC103313207",103313207,null,"103313207 [Gene Symbol: LOC103313207] [Locus Tag: TcasGA2_TC032609] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103313207] [Gene Type: protein-coding]","LOC103313207; TcasGA2_TC032609"]
[360,"NC_007418.3",20381956,"SNV","A","G","Homozygous",20,20,100,1,16,7,0.3,37.5,23,23,9,13,null,1,1,"no","G/G","No",1,80.09,"XP_008194055.1:c.[706A>G]; XP_008194070.1:c.[746-6744T>C]; XP_015833856.1:c.[746-6744T>C]","XP_008194055.1:p.Asn236Asp","LOC657445, LOC657603","657445 , 657603",null,"657445 [Gene Symbol: LOC657445] [Locus Tag: TcasGA2_TC002113] [Chromosome: LG3] [Map Location: ] [Description: ALK tyrosine kinase receptor] [Gene Type: protein-coding] || 657603 [Gene Symbol: LOC657603] [Locus Tag: TcasGA2_TC002148] [Chromosome: LG3] [Map Location: ] [Description: inactive peptidyl-prolyl cis-trans isomerase shutdown] [Gene Type: protein-coding]","LOC657445; TcasGA2_TC002113 || LOC657603; TcasGA2_TC002148"]
[361,"NC_007418.3",22248538,"SNV","G","A","Homozygous",21,21,100,1,15,6,0.29,37.52,21,21,12,15,null,1,1,"no","A/A","No",1,84.7,"XP_008191352.1:c.[944G>A]; XP_008191351.1:c.[944G>A]","XP_008191352.1:p.[Ser315Asn]; XP_008191351.1:p.[Ser315Asn]","LOC656254",656254,null,"656254 [Gene Symbol: LOC656254] [Locus Tag: TcasGA2_TC003827] [Chromosome: LG3] [Map Location: ] [Description: zinc finger autosomal protein] [Gene Type: protein-coding]","LOC656254; TcasGA2_TC003827"]
[362,"NC_007418.3",23045504,"SNV","G","A","Homozygous",22,22,100,1,17,9,0.35,36.36,26,26,10,15,null,1,1,"no","A/A","No",1,87.71,"XP_015833932.1:c.[3521C>T]; XP_015833933.1:c.[3467C>T]; XP_015833934.1:c.[3521C>T]; XP_015833931.1:c.[3521C>T]; XP_015833935.1:c.[3521C>T]","XP_015833932.1:p.[Ala1174Val]; XP_015833933.1:p.[Ala1156Val]; XP_015833934.1:p.[Ala1174Val]; XP_015833931.1:p.[Ala1174Val]; XP_015833935.1:p.[Ala1174Val]","LOC656419",656419,null,"656419 [Gene Symbol: LOC656419] [Locus Tag: TcasGA2_TC002571] [Chromosome: LG3] [Map Location: ] [Description: protein dopey-1 homolog] [Gene Type: protein-coding]","LOC656419; TcasGA2_TC002571"]
[363,"NC_007418.3",24201585,"SNV","A","G","Heterozygous",9,29,31.03,1,7,3,0.3,37.56,10,33,7,8,-2.12,0.67,0.74,"no","A/G","No",1,37.78,"NP_001159495.1:c.[487+1385T>C]; XP_008198962.1:c.[1412T>C]","XP_008198962.1:p.Ile471Thr","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[364,"NC_007418.3",24202996,"SNV","G","A","Heterozygous",10,29,34.48,1,7,6,0.46,39.1,13,37,6,6,0.67,0.49,0.97,"no","A/G","No",1,59.39,"XP_008198962.1:c.[1103-431C>T]; NP_001159495.1:c.[461C>T]","NP_001159495.1:p.Thr154Ile","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[365,"NC_007418.3",24203111,"SNV","C","T","Heterozygous",14,33,42.42,1,2,14,0.12,38.93,16,37,9,10,0.09,0.8,0.93,"no","C/T","No",1,99.04,"XP_008198962.1:c.[1103-546G>A]; NP_001159495.1:c.[346G>A]","NP_001159495.1:p.Gly116Ser","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[366,"NC_007418.3",24203131,"SNV","T","C","Heterozygous",6,26,23.08,0.98,1,6,0.14,38.5,7,28,4,5,-1.1,0.95,0.99,"no","C/T","No",1,18.04,"NP_001159495.1:c.[326A>G]; XP_008198962.1:c.[1103-566A>G]","NP_001159495.1:p.Lys109Arg","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[367,"NC_007418.3",24203135,"SNV","A","C","Heterozygous",8,27,29.63,1,1,8,0.11,39.88,9,29,5,6,1.41,0.38,0.8,"no","A/C","No",1,40.26,"NP_001159495.1:c.[322T>G]; XP_008198962.1:c.[1103-570T>G]","NP_001159495.1:p.Phe108Val","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[368,"NC_007418.3",24203157,"SNV","G","T","Heterozygous",10,24,41.67,1,0,10,0,38.2,10,24,6,8,-1.11,0.27,0.3,"no","G/T","No",1,69.95,"NP_001159495.1:c.[300C>A]; XP_008198962.1:c.[1103-592C>A]","NP_001159495.1:p.Asp100Glu","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[369,"NC_007418.3",25105251,"SNV","C","T","Heterozygous",24,34,70.59,1,8,18,0.31,39.12,26,36,14,16,2.14,0.81,0.77,"no","C/T","No",1,46.77,"XP_015833997.1:c.1259C>T","XP_015833997.1:p.Ala420Val","LOC103314489",103314489,null,"103314489 [Gene Symbol: LOC103314489] [Locus Tag: TcasGA2_TC010385] [Chromosome: LG3] [Map Location: ] [Description: sodium-dependent neutral amino acid transporter B(0)AT2] [Gene Type: protein-coding]","TcasGA2_TC010385; LOC103314489"]
[370,"NC_007418.3",25623535,"SNV","C","A","Homozygous",25,25,100,1,10,21,0.32,38.92,31,31,12,14,null,1,1,"no","A/A","No",1,96.73,"XP_008191393.1:c.[5708C>A]; XP_008191391.1:c.[5810C>A]; XP_015834046.1:c.[3178-2165C>A]","XP_008191393.1:p.[Thr1903Lys]; XP_008191391.1:p.[Thr1937Lys]","LOC656175",656175,null,"656175 [Gene Symbol: LOC656175] [Locus Tag: TcasGA2_TC003876] [Chromosome: LG3] [Map Location: ] [Description: chitinase 6] [Gene Type: protein-coding]","LOC656175; TcasGA2_TC003876; GLEAN_03876; Cht6"]
[371,"NC_007418.3",25908694,"SNV","T","C","Homozygous",28,28,100,1,18,14,0.44,37.07,32,32,17,19,null,1,1,"no","C/C","No",1,104.19,"XP_015834034.1:c.925A>G","XP_015834034.1:p.Arg309Gly","LOC656565, LOC657482","656565 , 657482",null,"656565 [Gene Symbol: LOC656565] [Locus Tag: TcasGA2_TC002522] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase Src64B] [Gene Type: protein-coding] || 657482 [Gene Symbol: LOC657482] [Locus Tag: TcasGA2_TC002520] [Chromosome: LG3] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2] [Gene Type: protein-coding]","LOC656565; TcasGA2_TC002522 || TcasGA2_TC002520; LOC657482"]
[372,"NC_007418.3",26454800,"SNV","T","G","Homozygous",25,25,100,1,15,14,0.48,35.72,29,29,12,18,null,1,1,"no","G/G","No",1,95.13,"XP_008191438.1:c.[3490A>C]; XP_015834049.1:c.[3286A>C]; XP_008191437.1:c.[3490A>C]","XP_008191438.1:p.[Asn1164His]; XP_015834049.1:p.[Asn1096His]; XP_008191437.1:p.[Asn1164His]","LOC659451",659451,null,"659451 [Gene Symbol: LOC659451] [Locus Tag: TcasGA2_TC002498] [Chromosome: LG3] [Map Location: ] [Description: dual oxidase] [Gene Type: protein-coding]","TcasGA2_TC002498; LOC659451"]
[373,"NC_007418.3",27489049,"SNV","C","T","Heterozygous",7,20,35,1,2,6,0.25,37.71,8,21,4,5,-0.75,0.2,0.68,"no","C/T","No",1,46.26,"XP_015834065.1:c.[560G>A]; XP_008199102.1:c.[560G>A]","XP_015834065.1:p.[Arg187His]; XP_008199102.1:p.[Arg187His]","LOC657013",657013,null,"657013 [Gene Symbol: LOC657013] [Locus Tag: TcasGA2_TC002482] [Chromosome: LG3] [Map Location: ] [Description: otoferlin] [Gene Type: protein-coding]","LOC657013; TcasGA2_TC002482"]
[374,"NC_007418.3",27826061,"SNV","A","C","Homozygous",21,21,100,1,15,7,0.32,35.52,22,22,10,14,null,1,1,"no","C/C","No",1,80.11,"XP_967329.1:c.259T>G","XP_967329.1:p.Ser87Ala","LOC655674",655674,null,"655674 [Gene Symbol: LOC655674] [Locus Tag: TcasGA2_TC002471] [Chromosome: LG3] [Map Location: ] [Description: sulfhydryl oxidase 2] [Gene Type: protein-coding]","TcasGA2_TC002471; LOC655674"]
[375,"NC_007418.3",27826253,"SNV","T","C","Homozygous",20,20,100,1,14,8,0.36,35.65,22,22,9,14,null,1,1,"no","C/C","No",1,80.11,"XP_967329.1:c.67A>G","XP_967329.1:p.Ile23Val","LOC655674",655674,null,"655674 [Gene Symbol: LOC655674] [Locus Tag: TcasGA2_TC002471] [Chromosome: LG3] [Map Location: ] [Description: sulfhydryl oxidase 2] [Gene Type: protein-coding]","TcasGA2_TC002471; LOC655674"]
[376,"NC_007418.3",27920471,"SNV","G","A","Homozygous",24,24,100,1,17,8,0.32,37.71,25,25,11,12,null,1,1,"no","A/A","No",1,93.73,"XP_015834159.1:c.[692+12695G>A]; XP_015834116.1:c.[692+12695G>A]; XP_015834130.1:c.[692+12695G>A]; XP_015834149.1:c.[692+12695G>A]; XP_015834154.1:c.[692+12695G>A]; XP_015834119.1:c.[693-226G>A]; XP_015834136.1:c.[693-6725G>A]; XP_015834114.1:c.[692+12695G>A]; XP_015834135.1:c.[1453G>A]; XP_015834138.1:c.[692+12695G>A]; XP_015834125.1:c.[692+12695G>A]; XP_015834126.1:c.[692+12695G>A]; XP_015834148.1:c.[692+12695G>A]; XP_015834160.1:c.[692+12695G>A]; XP_015834118.1:c.[693-1503G>A]; XP_015834134.1:c.[692+12695G>A]; XP_015834115.1:c.[692+12695G>A]; XP_015834127.1:c.[692+12695G>A]; XP_015834137.1:c.[692+12695G>A]; XP_015834153.1:c.[692+12695G>A]; XP_015834124.1:c.[692+12695G>A]; XP_015834156.1:c.[692+12695G>A]; XP_015834162.1:c.[692+12695G>A]; XP_015834145.1:c.[692+12695G>A]; XP_015834140.1:c.[692+12695G>A]; XP_015834161.1:c.[692+12695G>A]; XP_015834143.1:c.[692+12695G>A]; XP_015834158.1:c.[693-2996G>A]; XP_015834157.1:c.[692+12695G>A]; XP_015834123.1:c.[692+12695G>A]; XP_015834141.1:c.[693-7818G>A]; XP_015834165.1:c.[693-5805G>A]; XP_015834155.1:c.[693-12344G>A]; XP_015834142.1:c.[692+12695G>A]; XP_015834163.1:c.[692+12695G>A]; XP_015834152.1:c.[692+12695G>A]; XP_015834129.1:c.[692+12695G>A]; XP_015834144.1:c.[692+12695G>A]; XP_015834120.1:c.[693-9753G>A]; XP_015834147.1:c.[692+12695G>A]; XP_015834122.1:c.[692+12695G>A]; XP_015834131.1:c.[692+12695G>A]; XP_015834121.1:c.[692+12695G>A]; XP_015834166.1:c.[692+12695G>A]; XP_015834164.1:c.[693-4800G>A]; XP_015834151.1:c.[692+12695G>A]","XP_015834135.1:p.Glu485Lys","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[377,"NC_007418.3",27925741,"SNV","T","C","Homozygous",20,20,100,1,15,5,0.25,37.95,20,20,12,15,null,1,1,"no","C/C","No",1,80.12,"XP_015834155.1:c.[693-7074T>C]; XP_015834142.1:c.[692+17965T>C]; XP_015834130.1:c.[692+17965T>C]; XP_015834140.1:c.[692+17965T>C]; XP_015834159.1:c.[692+17965T>C]; XP_015834143.1:c.[692+17965T>C]; XP_015834114.1:c.[692+17965T>C]; XP_015834122.1:c.[692+17965T>C]; XP_015834151.1:c.[693-17669T>C]; XP_015834120.1:c.[693-4483T>C]; XP_015834165.1:c.[693-535T>C]; XP_015834154.1:c.[692+17965T>C]; XP_015834157.1:c.[692+17965T>C]; XP_015834147.1:c.[693-9378T>C]; XP_015834138.1:c.[692+17965T>C]; XP_015834152.1:c.[692+17965T>C]; XP_015834166.1:c.[692+17965T>C]; XP_015834134.1:c.[692+17965T>C]; XP_015834121.1:c.[692+17965T>C]; XP_015834125.1:c.[692+17965T>C]; XP_015834163.1:c.[692+17965T>C]; XP_015834156.1:c.[692+17965T>C]; XP_015834141.1:c.[693-2548T>C]; XP_015834136.1:c.[693-1455T>C]; XP_015834127.1:c.[692+17965T>C]; XP_015834116.1:c.[692+17965T>C]; XP_015834137.1:c.[692+17965T>C]; XP_015834126.1:c.[692+17965T>C]; XP_015834161.1:c.[692+17965T>C]; XP_015834131.1:c.[692+17965T>C]; XP_015834124.1:c.[692+17965T>C]; XP_015834115.1:c.[692+17965T>C]; XP_015834123.1:c.[692+17965T>C]; XP_015834148.1:c.[693-14144T>C]; XP_015834160.1:c.[692+17965T>C]; XP_015834162.1:c.[692+17965T>C]; XP_015834149.1:c.[693-9378T>C]; XP_015834164.1:c.[1163T>C]; XP_015834144.1:c.[693-16462T>C]; XP_015834145.1:c.[693-11721T>C]; XP_015834153.1:c.[693-8178T>C]; XP_015834129.1:c.[692+17965T>C]","XP_015834164.1:p.Ile388Thr","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[378,"NC_007418.3",27935842,"SNV","G","A","Homozygous",21,21,100,1,13,11,0.46,39.43,24,24,10,14,null,1,1,"no","A/A","No",1,84.69,"XP_015834154.1:c.[693-27979G>A]; XP_015834114.1:c.[692+28066G>A]; XP_015834161.1:c.[693-23224G>A]; XP_015834123.1:c.[692+28066G>A]; XP_015834145.1:c.[693-1620G>A]; XP_015834142.1:c.[693-10911G>A]; XP_015834147.1:c.[1416G>A]; XP_015834129.1:c.[692+28066G>A]; XP_015834140.1:c.[692+28066G>A]; XP_015834115.1:c.[692+28066G>A]; XP_015834126.1:c.[692+28066G>A]; XP_015834138.1:c.[692+28066G>A]; XP_015834156.1:c.[692+28066G>A]; XP_015834152.1:c.[692+28066G>A]; XP_015834148.1:c.[693-4043G>A]; XP_015834166.1:c.[693-21175G>A]; XP_015834149.1:c.[1377+39G>A]; XP_015834116.1:c.[692+28066G>A]; XP_015834130.1:c.[692+28066G>A]; XP_015834163.1:c.[692+28066G>A]; XP_015834122.1:c.[693-13819G>A]; XP_015834125.1:c.[692+28066G>A]; XP_015834134.1:c.[692+28066G>A]; XP_015834155.1:c.[1410G>A]; XP_015834162.1:c.[692+28066G>A]; XP_015834160.1:c.[693-18848G>A]; XP_015834137.1:c.[692+28066G>A]; XP_015834159.1:c.[693-17758G>A]; XP_015834143.1:c.[692+28066G>A]; XP_015834144.1:c.[693-6361G>A]; XP_015834151.1:c.[693-7568G>A]; XP_015834127.1:c.[692+28066G>A]; XP_015834124.1:c.[692+28066G>A]; XP_015834131.1:c.[692+28066G>A]; XP_015834157.1:c.[692+28066G>A]; XP_015834121.1:c.[692+28066G>A]","XP_015834147.1:p.[Met472Ile]; XP_015834155.1:p.[Met470Ile]","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[379,"NC_007418.3",27977105,"SNV","T","C","Homozygous",22,22,100,1,18,5,0.22,38.18,23,23,12,14,null,1,1,"no","C/C","No",1,86.13,"XP_015834156.1:c.[693-3188T>C]; XP_015834116.1:c.[693-37780T>C]; XP_015834162.1:c.[693-24514T>C]; XP_015834138.1:c.[693-22200T>C]; XP_015834152.1:c.[693-7458T>C]; XP_015834124.1:c.[693-13585T>C]; XP_015834114.1:c.[693-18124T>C]; XP_015834125.1:c.[693-26922T>C]; XP_015834140.1:c.[693-5936T>C]; XP_015834157.1:c.[693-2177T>C]; XP_015834143.1:c.[791T>C]; XP_015834127.1:c.[693-10509T>C]; XP_015834115.1:c.[693-41286T>C]; XP_015834130.1:c.[693-30799T>C]; XP_015834121.1:c.[693-48897T>C]; XP_015834123.1:c.[693-34266T>C]","XP_015834143.1:p.Val264Ala","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[380,"NC_007418.3",27999748,"SNV","C","A","Homozygous",21,21,100,1,1,20,0.05,38.1,21,21,8,10,null,1,1,"no","A/A","No",1,84.69,"XP_015834162.1:c.[693-1871C>A]; XP_015834130.1:c.[693-8156C>A]; XP_015834116.1:c.[693-15137C>A]; XP_015834115.1:c.[693-18643C>A]; XP_015834138.1:c.[1136C>A]; XP_015834125.1:c.[693-4279C>A]; XP_015834121.1:c.[693-26254C>A]; XP_015834123.1:c.[693-11623C>A]","XP_015834138.1:p.Thr379Lys","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[381,"NC_007418.3","28030986..28030987","MNV","CT","GC","Homozygous",26,26,100,1,6,22,0.21,35.77,28,28,11,16,null,1,1,"no","GC/GC","No",1,200,"XP_968354.1:c.2784_2785delAGinsGC","XP_968354.1:p.Ala929Pro","LOC656754",656754,null,"656754 [Gene Symbol: LOC656754] [Locus Tag: TcasGA2_TC002467] [Chromosome: LG3] [Map Location: ] [Description: lysosomal alpha-mannosidase] [Gene Type: protein-coding]","LOC656754; TcasGA2_TC002467"]
[382,"NC_007418.3",28031943,"SNV","T","C","Homozygous",24,24,100,1,11,15,0.42,38.67,26,26,18,20,null,1,1,"no","C/C","No",1,92.15,"XP_968354.1:c.1966A>G","XP_968354.1:p.Asn656Asp","LOC656754",656754,null,"656754 [Gene Symbol: LOC656754] [Locus Tag: TcasGA2_TC002467] [Chromosome: LG3] [Map Location: ] [Description: lysosomal alpha-mannosidase] [Gene Type: protein-coding]","LOC656754; TcasGA2_TC002467"]
[383,"NC_007418.3",28054367,"SNV","T","C","Homozygous",23,23,100,1,17,15,0.47,38.65,32,32,14,14,null,1,1,"no","C/C","No",1,89.14,"XP_968596.1:c.1559A>G","XP_968596.1:p.Asn520Ser","LOC657014",657014,null,"657014 [Gene Symbol: LOC657014] [Locus Tag: TcasGA2_TC002464] [Chromosome: LG3] [Map Location: ] [Description: lysosomal alpha-mannosidase] [Gene Type: protein-coding]","TcasGA2_TC002464; LOC657014"]
[384,"NC_007418.3",28175126,"SNV","T","C","Heterozygous",5,20,25,0.99,5,3,0.38,37.6,8,30,4,5,0.57,0.68,0.99,"no","C/T","No",1,21.85,"XP_015834174.1:c.[8648T>C]; XP_015834178.1:c.[8258T>C]; XP_015834170.1:c.[8741T>C]; XP_015834181.1:c.[5764+5068T>C]; XP_015834180.1:c.[4829T>C]; XP_015834179.1:c.[8168T>C]; XP_015834171.1:c.[8723T>C]; XP_008200060.1:c.[8141T>C]; XP_015834172.1:c.[8714T>C]; XP_015834175.1:c.[8291T>C]; XP_015834177.1:c.[8267T>C]; XP_015834173.1:c.[8651T>C]; XP_015834176.1:c.[8285T>C]","XP_015834174.1:p.[Ile2883Thr]; XP_015834178.1:p.[Ile2753Thr]; XP_015834170.1:p.[Ile2914Thr]; XP_015834180.1:p.[Ile1610Thr]; XP_015834179.1:p.[Ile2723Thr]; XP_015834171.1:p.[Ile2908Thr]; XP_008200060.1:p.[Ile2714Thr]; XP_015834172.1:p.[Ile2905Thr]; XP_015834175.1:p.[Ile2764Thr]; XP_015834177.1:p.[Ile2756Thr]; XP_015834173.1:p.[Ile2884Thr]; XP_015834176.1:p.[Ile2762Thr]","LOC100142605",100142605,null,"100142605 [Gene Symbol: LOC100142605] [Locus Tag: TcasGA2_TC003960] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: ankyrin-3] [Gene Type: protein-coding]","TcasGA2_TC003960; LOC100142605"]
[385,"NC_007418.3",28186092,"SNV","C","T","Homozygous",25,25,100,1,7,21,0.25,37.36,28,28,15,18,null,1,1,"no","T/T","No",1,96.74,"XP_015834179.1:c.[18011C>T]; XP_015834176.1:c.[18128C>T]; XP_008200060.1:c.[17984C>T]; XP_015834180.1:c.[14672C>T]; XP_015834177.1:c.[18110C>T]; XP_015834173.1:c.[18494C>T]; XP_015834181.1:c.[9992C>T]; XP_015834170.1:c.[18584C>T]; XP_015834175.1:c.[18134C>T]; XP_015834178.1:c.[18101C>T]; XP_015834172.1:c.[18557C>T]; XP_015834171.1:c.[18566C>T]; XP_015834174.1:c.[18491C>T]","XP_015834179.1:p.[Pro6004Leu]; XP_015834176.1:p.[Pro6043Leu]; XP_008200060.1:p.[Pro5995Leu]; XP_015834180.1:p.[Pro4891Leu]; XP_015834177.1:p.[Pro6037Leu]; XP_015834173.1:p.[Pro6165Leu]; XP_015834181.1:p.[Pro3331Leu]; XP_015834170.1:p.[Pro6195Leu]; XP_015834175.1:p.[Pro6045Leu]; XP_015834178.1:p.[Pro6034Leu]; XP_015834172.1:p.[Pro6186Leu]; XP_015834171.1:p.[Pro6189Leu]; XP_015834174.1:p.[Pro6164Leu]","LOC100142605",100142605,null,"100142605 [Gene Symbol: LOC100142605] [Locus Tag: TcasGA2_TC003960] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: ankyrin-3] [Gene Type: protein-coding]","TcasGA2_TC003960; LOC100142605"]
[386,"NC_007418.3",28743143,"SNV","A","T","Homozygous",20,22,90.91,1,10,12,0.45,39.55,22,24,12,14,null,0.99,1,"no","T/T","No",1,26.42,"XP_008191505.1:c.1739A>T","XP_008191505.1:p.Gln580Leu","LOC103312505",103312505,null,"103312505 [Gene Symbol: LOC103312505] [Locus Tag: TcasGA2_TC002420] [Chromosome: LG3] [Map Location: ] [Description: zinc finger protein 320] [Gene Type: protein-coding]","TcasGA2_TC002420; LOC103312505"]
[387,"NC_007418.3",28755662,"SNV","A","T","Heterozygous",10,24,41.67,1,8,2,0.2,38.1,10,24,3,6,-1.79,0.32,0.94,"no","A/T","No",1,73.43,"XP_008191502.1:c.654A>T","XP_008191502.1:p.Gln218His","LOC661541",661541,null,"661541 [Gene Symbol: LOC661541] [Locus Tag: TcasGA2_TC002423] [Chromosome: LG3] [Map Location: ] [Description: brefeldin A-inhibited guanine nucleotide-exchange protein 1] [Gene Type: protein-coding]","LOC661541; TcasGA2_TC002423"]
[388,"NC_007418.3",28763160,"SNV","A","G","Heterozygous",18,23,78.26,0.95,13,8,0.38,38,21,26,13,14,1.3,0.82,0.89,"no","A/G","No",1,12.75,"XP_008191502.1:c.1627A>G","XP_008191502.1:p.Ile543Val","LOC661541",661541,null,"661541 [Gene Symbol: LOC661541] [Locus Tag: TcasGA2_TC002423] [Chromosome: LG3] [Map Location: ] [Description: brefeldin A-inhibited guanine nucleotide-exchange protein 1] [Gene Type: protein-coding]","LOC661541; TcasGA2_TC002423"]
[389,"NC_007418.3",28791926,"SNV","G","A","Homozygous",22,22,100,1,13,14,0.48,38.86,27,27,13,14,null,1,1,"no","A/A","No",1,87.7,"XP_966589.1:c.1460G>A","XP_966589.1:p.Gly487Glu","LOC659553",659553,null,"659553 [Gene Symbol: LOC659553] [Locus Tag: TcasGA2_TC002426] [Chromosome: LG3] [Map Location: ] [Description: kelch domain-containing protein 4] [Gene Type: protein-coding]","LOC659553; TcasGA2_TC002426"]
[390,"NC_007418.3",28932375,"SNV","T","C","Homozygous",20,20,100,1,15,8,0.35,37.7,23,23,13,13,null,1,1,"no","C/C","No",1,80.12,"XP_015834218.1:c.640T>C","XP_015834218.1:p.Tyr214His","LOC107397694",107397694,null,"107397694 [Gene Symbol: LOC107397694] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397694] [Gene Type: protein-coding]","LOC107397694"]
[391,"NC_007418.3","29019974..29019975","MNV","GA","AG","Homozygous",25,25,100,1,16,16,0.5,38.64,32,32,15,19,null,1,1,"no","AG/AG","No",1,200,"XP_015834201.1:c.[38274_38275delTCinsCT]; XP_015834202.1:c.[36304+2330_36304+2331delTCinsCT]; XP_015834190.1:c.[38169_38170delTCinsCT]; XP_015834196.1:c.[30867_30868delTCinsCT]; XP_015834189.1:c.[38262_38263delTCinsCT]; XP_015834192.1:c.[38274_38275delTCinsCT]; XP_015834195.1:c.[35658_35659delTCinsCT]; XP_015834200.1:c.[26844_26845delTCinsCT]; XP_015834197.1:c.[36304+2330_36304+2331delTCinsCT]; XP_015834191.1:c.[37914_37915delTCinsCT]; XP_015834194.1:c.[38274_38275delTCinsCT]; XP_015834199.1:c.[26862_26863delTCinsCT]; XP_015834198.1:c.[38274_38275delTCinsCT]","XP_015834201.1:p.[His12759Tyr]; XP_015834190.1:p.[His12724Tyr]; XP_015834196.1:p.[His10290Tyr]; XP_015834189.1:p.[His12755Tyr]; XP_015834192.1:p.[His12759Tyr]; XP_015834195.1:p.[His11887Tyr]; XP_015834200.1:p.[His8949Tyr]; XP_015834191.1:p.[His12639Tyr]; XP_015834194.1:p.[His12759Tyr]; XP_015834199.1:p.[His8955Tyr]; XP_015834198.1:p.[His12759Tyr]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[392,"NC_007418.3",29020060,"SNV","A","G","Homozygous",29,29,100,1,14,19,0.42,38.9,33,33,8,15,null,1,1,"no","G/G","No",1,107.18,"XP_015834202.1:c.[36304+2245T>C]; XP_015834189.1:c.[38177T>C]; XP_015834199.1:c.[26777T>C]; XP_015834192.1:c.[38189T>C]; XP_015834201.1:c.[38189T>C]; XP_015834198.1:c.[38189T>C]; XP_015834197.1:c.[36304+2245T>C]; XP_015834194.1:c.[38189T>C]; XP_015834195.1:c.[35573T>C]; XP_015834200.1:c.[26759T>C]; XP_015834196.1:c.[30782T>C]; XP_015834190.1:c.[38084T>C]; XP_015834191.1:c.[37829T>C]","XP_015834189.1:p.[Ile12726Thr]; XP_015834199.1:p.[Ile8926Thr]; XP_015834192.1:p.[Ile12730Thr]; XP_015834201.1:p.[Ile12730Thr]; XP_015834198.1:p.[Ile12730Thr]; XP_015834194.1:p.[Ile12730Thr]; XP_015834195.1:p.[Ile11858Thr]; XP_015834200.1:p.[Ile8920Thr]; XP_015834196.1:p.[Ile10261Thr]; XP_015834190.1:p.[Ile12695Thr]; XP_015834191.1:p.[Ile12610Thr]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[393,"NC_007418.3",29021848,"SNV","A","G","Homozygous",21,21,100,1,15,10,0.4,38,25,25,12,17,null,1,1,"no","G/G","No",1,83.1,"XP_015834199.1:c.[24989T>C]; XP_015834194.1:c.[36401T>C]; XP_015834197.1:c.[36304+457T>C]; XP_015834195.1:c.[33785T>C]; XP_015834202.1:c.[36304+457T>C]; XP_015834201.1:c.[36401T>C]; XP_015834189.1:c.[36389T>C]; XP_015834192.1:c.[36401T>C]; XP_015834191.1:c.[36041T>C]; XP_015834190.1:c.[36296T>C]; XP_015834196.1:c.[28994T>C]; XP_015834200.1:c.[24971T>C]; XP_015834198.1:c.[36401T>C]","XP_015834199.1:p.[Leu8330Pro]; XP_015834194.1:p.[Leu12134Pro]; XP_015834195.1:p.[Leu11262Pro]; XP_015834201.1:p.[Leu12134Pro]; XP_015834189.1:p.[Leu12130Pro]; XP_015834192.1:p.[Leu12134Pro]; XP_015834191.1:p.[Leu12014Pro]; XP_015834190.1:p.[Leu12099Pro]; XP_015834196.1:p.[Leu9665Pro]; XP_015834200.1:p.[Leu8324Pro]; XP_015834198.1:p.[Leu12134Pro]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[394,"NC_007418.3",29031006,"SNV","A","T","Homozygous",20,20,100,1,10,13,0.43,38.5,23,23,15,15,null,1,1,"no","T/T","No",1,81.7,"XP_015834195.1:c.[26522T>A]; XP_015834200.1:c.[17708T>A]; XP_015834192.1:c.[29138T>A]; XP_015834191.1:c.[28778T>A]; XP_015834201.1:c.[29138T>A]; XP_015834202.1:c.[29138T>A]; XP_015834196.1:c.[25838-4239T>A]; XP_015834197.1:c.[29138T>A]; XP_015834198.1:c.[29138T>A]; XP_015834189.1:c.[29126T>A]; XP_015834199.1:c.[17726T>A]; XP_015834190.1:c.[29033T>A]; XP_015834194.1:c.[29138T>A]","XP_015834195.1:p.[Met8841Lys]; XP_015834200.1:p.[Met5903Lys]; XP_015834192.1:p.[Met9713Lys]; XP_015834191.1:p.[Met9593Lys]; XP_015834201.1:p.[Met9713Lys]; XP_015834202.1:p.[Met9713Lys]; XP_015834197.1:p.[Met9713Lys]; XP_015834198.1:p.[Met9713Lys]; XP_015834189.1:p.[Met9709Lys]; XP_015834199.1:p.[Met5909Lys]; XP_015834190.1:p.[Met9678Lys]; XP_015834194.1:p.[Met9713Lys]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[395,"NC_007418.3",29033304,"SNV","A","T","Homozygous",27,27,100,1,11,17,0.39,37.81,28,28,17,22,null,1,1,"no","T/T","No",1,102.75,"XP_015834192.1:c.[26840T>A]; XP_015834198.1:c.[26840T>A]; XP_015834202.1:c.[26840T>A]; XP_015834197.1:c.[26840T>A]; XP_015834190.1:c.[26735T>A]; XP_015834195.1:c.[24224T>A]; XP_015834194.1:c.[26840T>A]; XP_015834191.1:c.[26480T>A]; XP_015834201.1:c.[26840T>A]; XP_015834196.1:c.[25837+2436T>A]; XP_015834199.1:c.[15428T>A]; XP_015834200.1:c.[15410T>A]; XP_015834189.1:c.[26828T>A]","XP_015834192.1:p.[Ile8947Lys]; XP_015834198.1:p.[Ile8947Lys]; XP_015834202.1:p.[Ile8947Lys]; XP_015834197.1:p.[Ile8947Lys]; XP_015834190.1:p.[Ile8912Lys]; XP_015834195.1:p.[Ile8075Lys]; XP_015834194.1:p.[Ile8947Lys]; XP_015834191.1:p.[Ile8827Lys]; XP_015834201.1:p.[Ile8947Lys]; XP_015834199.1:p.[Ile5143Lys]; XP_015834200.1:p.[Ile5137Lys]; XP_015834189.1:p.[Ile8943Lys]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[396,"NC_007418.3",29038043,"SNV","C","T","Homozygous",22,22,100,1,8,18,0.31,37.09,26,26,12,15,null,1,1,"no","T/T","No",1,87.71,"XP_015834202.1:c.[25129G>A]; XP_015834189.1:c.[25117G>A]; XP_015834192.1:c.[25129G>A]; XP_015834190.1:c.[25024G>A]; XP_015834198.1:c.[25129G>A]; XP_015834191.1:c.[24769G>A]; XP_015834196.1:c.[25129G>A]; XP_015834199.1:c.[13717G>A]; XP_015834201.1:c.[25129G>A]; XP_015834195.1:c.[22513G>A]; XP_015834197.1:c.[25129G>A]; XP_015834200.1:c.[13699G>A]; XP_015834194.1:c.[25129G>A]","XP_015834202.1:p.[Val8377Ile]; XP_015834189.1:p.[Val8373Ile]; XP_015834192.1:p.[Val8377Ile]; XP_015834190.1:p.[Val8342Ile]; XP_015834198.1:p.[Val8377Ile]; XP_015834191.1:p.[Val8257Ile]; XP_015834196.1:p.[Val8377Ile]; XP_015834199.1:p.[Val4573Ile]; XP_015834201.1:p.[Val8377Ile]; XP_015834195.1:p.[Val7505Ile]; XP_015834197.1:p.[Val8377Ile]; XP_015834200.1:p.[Val4567Ile]; XP_015834194.1:p.[Val8377Ile]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[397,"NC_007418.3",29072371,"SNV","A","T","Homozygous",24,24,100,1,16,9,0.36,37.67,25,25,14,17,null,1,1,"no","T/T","No",1,93.73,"XP_015834190.1:c.[4867T>A]; XP_015834197.1:c.[4867T>A]; XP_015834202.1:c.[4867T>A]; XP_015834195.1:c.[2251T>A]; XP_015834192.1:c.[4867T>A]; XP_015834191.1:c.[4867T>A]; XP_015834196.1:c.[4867T>A]; XP_015834189.1:c.[4855T>A]; XP_015834194.1:c.[4867T>A]; XP_015834201.1:c.[4867T>A]; XP_015834198.1:c.[4867T>A]","XP_015834190.1:p.[Cys1623Ser]; XP_015834197.1:p.[Cys1623Ser]; XP_015834202.1:p.[Cys1623Ser]; XP_015834195.1:p.[Cys751Ser]; XP_015834192.1:p.[Cys1623Ser]; XP_015834191.1:p.[Cys1623Ser]; XP_015834196.1:p.[Cys1623Ser]; XP_015834189.1:p.[Cys1619Ser]; XP_015834194.1:p.[Cys1623Ser]; XP_015834201.1:p.[Cys1623Ser]; XP_015834198.1:p.[Cys1623Ser]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[398,"NC_007418.3",29126431,"SNV","T","A","Heterozygous",15,21,71.43,1,3,13,0.19,38,16,22,6,9,0.31,0.61,0.81,"no","A/T","No",1,30.71,"XP_015834204.1:c.[2264T>A]; XP_008191495.1:c.[2204T>A]","XP_015834204.1:p.[Ile755Asn]; XP_008191495.1:p.[Ile735Asn]","LOC660101",660101,null,"660101 [Gene Symbol: LOC660101] [Locus Tag: TcasGA2_TC002437] [Chromosome: LG3] [Map Location: ] [Description: titin homolog] [Gene Type: protein-coding]","TcasGA2_TC002437; LOC660101"]
[399,"NC_007418.3",29126917,"SNV","T","C","Heterozygous",15,22,68.18,1,6,10,0.38,39.33,16,27,7,11,1.09,0.92,0.93,"no","C/T","No",1,40.6,"XP_015834204.1:c.[2750T>C]; XP_008191495.1:c.[2690T>C]","XP_015834204.1:p.[Leu917Ser]; XP_008191495.1:p.[Leu897Ser]","LOC660101",660101,null,"660101 [Gene Symbol: LOC660101] [Locus Tag: TcasGA2_TC002437] [Chromosome: LG3] [Map Location: ] [Description: titin homolog] [Gene Type: protein-coding]","TcasGA2_TC002437; LOC660101"]
[400,"NC_007418.3",29127522,"SNV","C","T","Heterozygous",10,23,43.48,1,2,8,0.2,34.4,10,24,5,7,-1.52,0.89,0.75,"no","C/T","No",1,76.01,"XP_008191495.1:c.[3295C>T]; XP_015834204.1:c.[3355C>T]","XP_008191495.1:p.[Pro1099Ser]; XP_015834204.1:p.[Pro1119Ser]","LOC660101",660101,null,"660101 [Gene Symbol: LOC660101] [Locus Tag: TcasGA2_TC002437] [Chromosome: LG3] [Map Location: ] [Description: titin homolog] [Gene Type: protein-coding]","TcasGA2_TC002437; LOC660101"]
[401,"NC_007418.3",29333965,"SNV","T","C","Heterozygous",6,20,30,1,0,6,0,39.17,6,20,5,5,0.7,0.82,1,"no","C/T","No",1,34.7,"XP_015834224.1:c.[5640+5105A>G]; XP_015834222.1:c.[5640+5105A>G]; XP_008191482.1:c.[3024+5105A>G]; XP_015834227.1:c.[3267+5105A>G]; XP_015834233.1:c.[544T>C]; XP_008191480.1:c.[3261+5105A>G]; XP_015834228.1:c.[3267+5105A>G]; XP_015834230.1:c.[3258+5105A>G]; XP_015834226.1:c.[5496+5105A>G]; XP_015834231.1:c.[3258+5105A>G]; XP_015834229.1:c.[3261+5105A>G]; XP_015834225.1:c.[5580+5105A>G]","XP_015834233.1:p.Ser182Pro","LOC659452, LOC107397695","659452 , 107397695",null,"659452 [Gene Symbol: LOC659452] [Locus Tag: TcasGA2_TC003980] [Chromosome: LG3] [Map Location: ] [Description: FH1/FH2 domain-containing protein 3] [Gene Type: protein-coding] || 107397695 [Gene Symbol: LOC107397695] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397695] [Gene Type: protein-coding]","LOC659452; TcasGA2_TC003980 || LOC107397695"]
[402,"NC_007418.3",29531926,"SNV","C","A","Heterozygous",6,20,30,1,3,3,0.5,40,6,24,3,3,-0.11,0.15,0.93,"no","A/C","No",1,34.5,"XP_015834188.1:c.1858G>T","XP_015834188.1:p.Val620Leu","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[403,"NC_007418.3",29942396,"SNV","T","G","Homozygous",21,21,100,1,14,14,0.5,36.86,28,28,11,16,null,1,1,"no","G/G","No",1,80.09,"XP_969398.1:c.718A>C","XP_969398.1:p.Ser240Arg","LOC657875",657875,null,"657875 [Gene Symbol: LOC657875] [Locus Tag: TcasGA2_TC003965] [Chromosome: LG3] [Map Location: ] [Description: cyclic GMP-AMP synthase] [Gene Type: protein-coding]","TcasGA2_TC003965; LOC657875"]
[404,"NC_007418.3",30072080,"SNV","G","A","Heterozygous",5,22,22.73,0.97,5,0,0,38.4,5,23,3,4,-0.31,0.25,0.38,"no","A/G","No",1,15.49,"XP_008190836.1:c.644C>T","XP_008190836.1:p.Ala215Val","LOC100141988",100141988,null,"100141988 [Gene Symbol: LOC100141988] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: zinc finger protein with KRAB and SCAN domains 1] [Gene Type: protein-coding]","scrt1; LOC100141988"]
[405,"NC_007418.3","30486768..30486769","MNV","GG","AC","Homozygous",24,24,100,1,10,18,0.36,37.98,28,28,15,15,null,1,1,"no","AC/AC","No",1,200,"XP_015834268.1:c.7607_7608delCCinsGT","XP_015834268.1:p.Thr2536Ser","LOC100141546",100141546,null,"100141546 [Gene Symbol: LOC100141546] [Locus Tag: TcasGA2_TC002408] [Chromosome: LG3] [Map Location: ] [Description: protein-methionine sulfoxide oxidase Mical] [Gene Type: protein-coding]","LOC100141546; TcasGA2_TC002408"]
[406,"NC_007418.3",30633787,"SNV","T","C","Heterozygous",23,30,76.67,0.99,9,15,0.38,39.3,24,31,10,12,1.23,0.99,0.98,"no","C/T","No",1,18.43,"XP_015834277.1:c.[577A>G]; XP_015834276.1:c.[577A>G]","XP_015834277.1:p.[Ile193Val]; XP_015834276.1:p.[Ile193Val]","LOC103313919",103313919,null,"103313919 [Gene Symbol: LOC103313919] [Locus Tag: TcasGA2_TC032689] [Chromosome: LG3] [Map Location: ] [Description: E3 ubiquitin-protein ligase LRSAM1-like] [Gene Type: protein-coding]","TcasGA2_TC032689; LOC103313919"]
[407,"NC_007418.3",30634024,"SNV","T","C","Heterozygous",15,24,62.5,1,3,12,0.2,38.53,15,24,8,7,0.86,0.65,0.99,"no","C/T","No",1,60.48,"XP_015834277.1:c.[340A>G]; XP_015834276.1:c.[340A>G]","XP_015834277.1:p.[Thr114Ala]; XP_015834276.1:p.[Thr114Ala]","LOC103313919",103313919,null,"103313919 [Gene Symbol: LOC103313919] [Locus Tag: TcasGA2_TC032689] [Chromosome: LG3] [Map Location: ] [Description: E3 ubiquitin-protein ligase LRSAM1-like] [Gene Type: protein-coding]","TcasGA2_TC032689; LOC103313919"]
[408,"NC_007418.3",31255383,"SNV","A","G","Homozygous",22,22,100,1,10,14,0.42,37.36,24,24,12,15,null,1,1,"no","G/G","No",1,86.1,"XP_968597.1:c.955A>G","XP_968597.1:p.Lys319Glu","LOC657015",657015,null,"657015 [Gene Symbol: LOC657015] [Locus Tag: TcasGA2_TC004027] [Chromosome: LG3] [Map Location: ] [Description: carboxypeptidase A] [Gene Type: protein-coding]","LOC657015; TcasGA2_TC004027"]
[409,"NC_007419.2",298716,"SNV","T","A","Heterozygous",6,20,30,1,4,3,0.43,38.83,7,21,4,5,0.37,0.83,0.9,"no","A/T","No",1,33.34,"XP_970176.1:c.224T>A","XP_970176.1:p.Leu75His","LOC658720",658720,null,"658720 [Gene Symbol: LOC658720] [Locus Tag: TcasGA2_TC030691] [Chromosome: LG4] [Map Location: ] [Description: abnormal spindle-like microcephaly-associated protein homolog] [Gene Type: protein-coding]","LOC658720; TcasGA2_TC030691"]
[410,"NC_007419.2",869470,"SNV","G","C","Homozygous",17,21,80.95,0.76,14,8,0.36,38.82,22,26,9,13,-0.27,0.94,0.99,"no","C/G","No",1,6.22,"XP_015834319.1:c.500C>G","XP_015834319.1:p.Thr167Ser","LOC662899",662899,null,"662899 [Gene Symbol: LOC662899] [Locus Tag: TcasGA2_TC007689] [Chromosome: LG4] [Map Location: ] [Description: fatty acid synthase] [Gene Type: protein-coding]","TcasGA2_TC007689; LOC662899"]
[411,"NC_007419.2",869816,"SNV","A","G","Homozygous",20,23,86.96,0.95,15,12,0.44,36.15,27,31,8,10,null,0.99,1,"no","G/G","No",1,13.32,"XP_015834319.1:c.154T>C","XP_015834319.1:p.Ser52Pro","LOC662899",662899,null,"662899 [Gene Symbol: LOC662899] [Locus Tag: TcasGA2_TC007689] [Chromosome: LG4] [Map Location: ] [Description: fatty acid synthase] [Gene Type: protein-coding]","TcasGA2_TC007689; LOC662899"]
[412,"NC_007419.2",894632,"SNV","A","G","Homozygous",21,21,100,1,8,16,0.33,36.9,24,24,11,12,null,1,1,"no","G/G","No",1,83.1,"XP_001813892.1:c.1421A>G","XP_001813892.1:p.Lys474Arg","LOC100141870",100141870,null,"100141870 [Gene Symbol: LOC100141870] [Locus Tag: TcasGA2_TC007806] [Chromosome: LG4] [Map Location: ] [Description: location of vulva defective 1] [Gene Type: protein-coding]","TcasGA2_TC007806; LOC100141870"]
[413,"NC_007419.2",907666,"SNV","G","T","Homozygous",22,22,100,1,5,21,0.19,36.86,26,26,14,14,null,1,1,"no","T/T","No",1,87.71,"XP_015834365.1:c.[3108+411G>T]; XP_008191674.1:c.[484C>A]; XP_008191675.1:c.[3087+411G>T]; XP_015834364.1:c.[3108+411G>T]","XP_008191674.1:p.Pro162Thr","LOC663146, LOC103312551","663146 , 103312551",null,"663146 [Gene Symbol: LOC663146] [Locus Tag: TcasGA2_TC007807] [Chromosome: LG4] [Map Location: ] [Description: cilia- and flagella-associated protein 44] [Gene Type: protein-coding] || 103312551 [Gene Symbol: LOC103312551] [Locus Tag: TcasGA2_TC007686] [Chromosome: LG4] [Map Location: ] [Description: proteasome inhibitor PI31 subunit] [Gene Type: protein-coding]","LOC663146; TcasGA2_TC007807 || TcasGA2_TC007686; LOC103312551"]
[414,"NC_007419.2",1394432,"SNV","G","A","Heterozygous",13,24,54.17,1,0,13,0,39.46,13,26,6,7,2.35,0.08,0.18,"no","A/G","No",1,87.19,"XP_966637.1:c.1081G>A","XP_966637.1:p.Val361Ile","LOC655049",655049,null,"655049 [Gene Symbol: LOC655049] [Locus Tag: TcasGA2_TC007846] [Chromosome: LG4] [Map Location: ] [Description: rab proteins geranylgeranyltransferase component A 1] [Gene Type: protein-coding]","LOC655049; TcasGA2_TC007846"]
[415,"NC_007419.2",1593010,"SNV","A","T","Heterozygous",9,21,42.86,1,2,7,0.22,39.78,9,21,3,4,2.81,0.1,0.44,"no","A/T","No",1,69.02,"XP_968050.1:c.[747-442A>T]; XP_008191777.1:c.[224T>A]","XP_008191777.1:p.Ile75Asn","LOC656424, LOC103312582","656424 , 103312582",null,"656424 [Gene Symbol: LOC656424] [Locus Tag: TcasGA2_TC007854] [Chromosome: LG4] [Map Location: ] [Description: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase] [Gene Type: protein-coding] || 103312582 [Gene Symbol: LOC103312582] [Locus Tag: TcasGA2_TC007649] [Chromosome: LG4] [Map Location: ] [Description: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase] [Gene Type: protein-coding]","LOC656424; TcasGA2_TC007854 || TcasGA2_TC007649; LOC103312582"]
[416,"NC_007419.2",1653656,"SNV","C","T","Homozygous",25,25,100,1,14,13,0.48,38.76,27,27,13,16,null,1,1,"no","T/T","No",1,96.74,"XP_015834948.1:c.[355G>A]; XP_015834949.1:c.[355G>A]","XP_015834948.1:p.[Gly119Ser]; XP_015834949.1:p.[Gly119Ser]","LOC656845",656845,null,"656845 [Gene Symbol: LOC656845] [Locus Tag: TcasGA2_TC007645] [Chromosome: LG4] [Map Location: ] [Description: nubbin] [Gene Type: protein-coding]","Nub; TcasGA2_TC007645; LOC656845"]
[417,"NC_007419.2",1758481,"SNV","A","C","Heterozygous",10,22,45.45,1,8,2,0.2,37,10,22,4,7,1.32,0.29,0.4,"no","A/C","No",1,79.73,"XP_968671.1:c.1139A>C","XP_968671.1:p.Lys380Thr","LOC657098",657098,null,"657098 [Gene Symbol: LOC657098] [Locus Tag: TcasGA2_TC007859] [Chromosome: LG4] [Map Location: ] [Description: ribonucleoside-diphosphate reductase large subunit] [Gene Type: protein-coding]","LOC657098; TcasGA2_TC007859"]
[418,"NC_007419.2",1847861,"SNV","G","A","Homozygous",21,21,100,1,13,13,0.5,37.38,26,26,13,15,null,1,1,"no","A/A","No",1,84.7,"XP_008191785.1:c.[583G>A]; XP_015834666.1:c.[82-20503G>A]","XP_008191785.1:p.Gly195Ser","LOC107397771, LOC658116","107397771 , 658116",null,"107397771 [Gene Symbol: LOC107397771] [Locus Tag: TcasGA2_TC007866] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397771] [Gene Type: protein-coding] || 658116 [Gene Symbol: LOC658116] [Locus Tag: TcasGA2_TC007865] [Chromosome: LG4] [Map Location: ] [Description: thioredoxin reductase 1, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC007866; LOC107397771 || TcasGA2_TC007865; LOC658116"]
[419,"NC_007419.2",1868389,"SNV","G","T","Homozygous",20,20,100,1,13,13,0.5,36.35,26,26,13,15,null,1,1,"no","T/T","No",1,81.7,"XP_015834661.1:c.[1676-2453C>A]; XP_015834666.1:c.[107G>T]; XP_015834662.1:c.[1649-2453C>A]; XP_008191786.1:c.[1682-2453C>A]","XP_015834666.1:p.Cys36Phe","LOC107397771, LOC652934","107397771 , 652934",null,"107397771 [Gene Symbol: LOC107397771] [Locus Tag: TcasGA2_TC007866] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397771] [Gene Type: protein-coding] || 652934 [Gene Symbol: LOC652934] [Locus Tag: TcasGA2_TC007637] [Chromosome: LG4] [Map Location: ] [Description: dachshund homolog 1] [Gene Type: protein-coding]","TcasGA2_TC007866; LOC107397771 || TcasGA2_TC007637; Dac; LOC652934"]
[420,"NC_007419.2",1994427,"SNV","T","G","Homozygous",20,20,100,1,11,10,0.48,38.15,21,21,14,13,null,1,1,"no","G/G","No",1,80.09,"XP_008191746.2:c.669A>C","XP_008191746.2:p.Lys223Asn","LOC100142257",100142257,null,"100142257 [Gene Symbol: LOC100142257] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: UDP-glucuronosyltransferase 2B15-like] [Gene Type: protein-coding]","LOC100142257"]
[421,"NC_007419.2",2012618,"SNV","A","T","Heterozygous",13,24,54.17,1,2,12,0.14,38.69,14,28,6,8,1.59,0.63,0.39,"no","A/T","No",1,86.03,"XP_970655.1:c.17T>A","XP_970655.1:p.Leu6His","LOC659237",659237,null,"659237 [Gene Symbol: LOC659237] [Locus Tag: TcasGA2_TC007629] [Chromosome: LG4] [Map Location: ] [Description: peroxisomal membrane protein PEX16] [Gene Type: protein-coding]","TcasGA2_TC007629; LOC659237"]
[422,"NC_007419.2",2035093,"SNV","G","T","Heterozygous",9,20,45,1,1,9,0.1,35.89,10,26,3,4,-0.8,0.3,0.78,"no","G/T","No",1,68.38,"XP_971019.1:c.3267G>T","XP_971019.1:p.Leu1089Phe","LOC659640",659640,null,"659640 [Gene Symbol: LOC659640] [Locus Tag: TcasGA2_TC007876] [Chromosome: LG4] [Map Location: ] [Description: ectopic P granules protein 5 homolog] [Gene Type: protein-coding]","TcasGA2_TC007876; LOC659640"]
[423,"NC_007419.2",2040647,"SNV","G","C","Homozygous",20,22,90.91,1,4,16,0.2,38.6,20,22,13,12,null,0.99,1,"no","C/C","No",1,24.3,"XP_971019.1:c.6380G>C","XP_971019.1:p.Ser2127Thr","LOC659640",659640,null,"659640 [Gene Symbol: LOC659640] [Locus Tag: TcasGA2_TC007876] [Chromosome: LG4] [Map Location: ] [Description: ectopic P granules protein 5 homolog] [Gene Type: protein-coding]","TcasGA2_TC007876; LOC659640"]
[424,"NC_007419.2",2092836,"SNV","A","G","Heterozygous",10,22,45.45,1,8,3,0.27,37.6,11,23,6,6,0.53,0.85,0.98,"no","A/G","No",1,79.89,"XP_971084.2:c.13048A>G","XP_971084.2:p.Asn4350Asp","LOC659713",659713,null,"659713 [Gene Symbol: LOC659713] [Locus Tag: TcasGA2_TC007877] [Chromosome: LG4] [Map Location: ] [Description: cadherin-related tumor suppressor] [Gene Type: protein-coding]","LOC659713; TcasGA2_TC007877; FAT; ft"]
[425,"NC_007419.2",2092935,"SNV","C","T","Heterozygous",6,22,27.27,1,1,6,0.14,39.5,7,23,4,3,0.7,0.87,0.99,"no","C/T","No",1,27.89,"XP_971084.2:c.13147C>T","XP_971084.2:p.Leu4383Phe","LOC659713",659713,null,"659713 [Gene Symbol: LOC659713] [Locus Tag: TcasGA2_TC007877] [Chromosome: LG4] [Map Location: ] [Description: cadherin-related tumor suppressor] [Gene Type: protein-coding]","LOC659713; TcasGA2_TC007877; FAT; ft"]
[426,"NC_007419.2",2104659,"SNV","A","G","Homozygous",20,20,100,1,12,14,0.46,37.8,26,26,12,14,null,1,1,"no","G/G","No",1,80.1,"XP_008191808.1:c.[910T>C]; XP_015835048.1:c.[385T>C]","XP_008191808.1:p.[Ser304Pro]; XP_015835048.1:p.[Ser129Pro]","LOC103312590",103312590,null,"103312590 [Gene Symbol: LOC103312590] [Locus Tag: TcasGA2_TC007624] [Chromosome: LG4] [Map Location: ] [Description: leucine-rich repeat protein soc-2 homolog] [Gene Type: protein-coding]","TcasGA2_TC007624; LOC103312590"]
[427,"NC_007419.2","2281929..2281930","MNV","GT","AC","Heterozygous",16,30,53.33,1,9,9,0.5,37.65,18,33,10,14,1.57,0.94,0.98,"no","complex","No",1,200,"XP_015834320.1:c.3413_3414delACinsGT","XP_015834320.1:p.Asn1138Ser","LOC660708",660708,null,"660708 [Gene Symbol: LOC660708] [Locus Tag: TcasGA2_TC007612] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC660708] [Gene Type: protein-coding]","TcasGA2_TC007612; LOC660708"]
[428,"NC_007419.2",2290112,"SNV","A","G","Heterozygous",14,23,60.87,1,8,9,0.47,38.21,17,26,9,9,2.93,1,1,"no","A/G","No",1,63.37,"XP_015834320.1:c.1187T>C","XP_015834320.1:p.Val396Ala","LOC660708",660708,null,"660708 [Gene Symbol: LOC660708] [Locus Tag: TcasGA2_TC007612] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC660708] [Gene Type: protein-coding]","TcasGA2_TC007612; LOC660708"]
[429,"NC_007419.2",2375809,"SNV","A","G","Homozygous",25,25,100,1,18,13,0.42,35.92,31,31,14,16,null,1,1,"no","G/G","No",1,95.14,"XP_001812942.1:c.377A>G","XP_001812942.1:p.Glu126Gly","LOC100141771",100141771,null,"100141771 [Gene Symbol: LOC100141771] [Locus Tag: TcasGA2_TC007896] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100141771] [Gene Type: protein-coding]","TcasGA2_TC007896; LOC100141771"]
[430,"NC_007419.2",2754778,"SNV","G","A","Heterozygous",5,22,22.73,0.97,2,3,0.4,38.8,5,24,3,3,1.76,0.08,0.97,"no","A/G","No",1,15.41,"XP_008191837.1:c.[1979C>T]; XP_973391.1:c.[1949C>T]","XP_008191837.1:p.[Thr660Ile]; XP_973391.1:p.[Thr650Ile]","LOC662184",662184,null,"662184 [Gene Symbol: LOC662184] [Locus Tag: TcasGA2_TC007589] [Chromosome: LG4] [Map Location: ] [Description: kinesin B] [Gene Type: protein-coding]","LOC662184; kinesin-B; TcasGA2_TC007589"]
[431,"NC_007419.2",2852898,"SNV","G","A","Heterozygous",14,21,66.67,1,9,7,0.44,36,16,25,6,9,-2.83,0.72,1,"no","A/G","No",1,44.5,"XP_974038.1:c.590C>T","XP_974038.1:p.Ser197Leu","LOC662870",662870,null,"662870 [Gene Symbol: LOC662870] [Locus Tag: TcasGA2_TC007575] [Chromosome: LG4] [Map Location: ] [Description: mediator of RNA polymerase II transcription subunit 7] [Gene Type: protein-coding]","LOC662870; TcasGA2_TC007575"]
[432,"NC_007419.2",2852912,"SNV","G","T","Heterozygous",14,22,63.64,1,9,7,0.44,38.29,16,26,6,9,0.61,0.64,1,"no","G/T","No",1,54.03,"XP_974038.1:c.576C>A","XP_974038.1:p.Asn192Lys","LOC662870",662870,null,"662870 [Gene Symbol: LOC662870] [Locus Tag: TcasGA2_TC007575] [Chromosome: LG4] [Map Location: ] [Description: mediator of RNA polymerase II transcription subunit 7] [Gene Type: protein-coding]","LOC662870; TcasGA2_TC007575"]
[433,"NC_007419.2",3011470,"SNV","C","G","Homozygous",20,20,100,1,12,11,0.48,39.05,23,23,12,12,null,1,1,"no","G/G","No",1,80.09,"XP_015834308.1:c.[2674G>C]; NP_001164308.1:c.[2674G>C]; XP_008191737.1:c.[2674G>C]; XP_008191735.1:c.[2674G>C]","XP_015834308.1:p.[Val892Leu]; NP_001164308.1:p.[Val892Leu]; XP_008191737.1:p.[Val892Leu]; XP_008191735.1:p.[Val892Leu]","pain",663508,"painless","663508 [Gene Symbol: pain] [Locus Tag: TcasGA2_TC007561] [Chromosome: LG4] [Map Location: ] [Description: painless] [Gene Type: protein-coding]","GLEAN_07561; pain; TcasGA2_TC007561"]
[434,"NC_007419.2",3032474,"SNV","C","T","Homozygous",22,22,100,1,16,7,0.3,38.77,23,23,12,17,null,1,1,"no","T/T","No",1,87.71,"XP_008191884.2:c.1244G>A","XP_008191884.2:p.Ser415Asn","LOC100142051",100142051,null,"100142051 [Gene Symbol: LOC100142051] [Locus Tag: TcasGA2_TC007557] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142051] [Gene Type: protein-coding]","TcasGA2_TC007557; LOC100142051"]
[435,"NC_007419.2",3032717,"SNV","G","C","Heterozygous",12,25,48,1,4,11,0.27,38.75,15,28,5,4,1.41,0.56,0.74,"no","C/G","No",1,95.85,"XP_008191884.2:c.1001C>G","XP_008191884.2:p.Ser334Cys","LOC100142051",100142051,null,"100142051 [Gene Symbol: LOC100142051] [Locus Tag: TcasGA2_TC007557] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142051] [Gene Type: protein-coding]","TcasGA2_TC007557; LOC100142051"]
[436,"NC_007419.2",3118591,"SNV","C","T","Heterozygous",36,50,72,1,20,21,0.49,38.75,41,59,23,25,0.77,0.87,1,"no","C/T","No",1,53.27,"XP_015834408.1:c.[255+28408C>T]; XP_008191906.2:c.[1579G>A]; XP_015834402.1:c.[1579G>A]; XP_015834403.1:c.[1231G>A]; XP_015834405.1:c.[1579G>A]; XP_015834404.1:c.[1018G>A]; XP_015834407.1:c.[603+28408C>T]; XP_008191893.1:c.[606+28408C>T]; XP_008191896.1:c.[525+28408C>T]; XP_015834401.1:c.[1579G>A]; XP_008191895.1:c.[273+28408C>T]; XP_015834409.1:c.[255+28408C>T]","XP_008191906.2:p.[Val527Ile]; XP_015834402.1:p.[Val527Ile]; XP_015834403.1:p.[Val411Ile]; XP_015834405.1:p.[Val527Ile]; XP_015834404.1:p.[Val340Ile]; XP_015834401.1:p.[Val527Ile]","LOC100141693, LOC100141568","100141693 , 100141568",null,"100141693 [Gene Symbol: LOC100141693] [Locus Tag: TcasGA2_TC007950] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100141693] [Gene Type: protein-coding] || 100141568 [Gene Symbol: LOC100141568] [Locus Tag: TcasGA2_TC007546] [Chromosome: LG4] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 17.6] [Gene Type: protein-coding]","LOC100141693; TcasGA2_TC007950 || TcasGA2_TC007546; LOC100141568"]
[437,"NC_007419.2",3220115,"SNV","C","T","Heterozygous",6,21,28.57,1,5,3,0.38,36.67,8,23,5,4,0,0.34,0.96,"no","C/T","No",1,30.61,"XP_976472.1:c.128C>T","XP_976472.1:p.Ala43Val","LOC664065",664065,null,"664065 [Gene Symbol: LOC664065] [Locus Tag: TcasGA2_TC007962] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC664065] [Gene Type: protein-coding]","LOC664065; TcasGA2_TC007962"]
[438,"NC_007419.2",3220122,"SNV","T","G","Heterozygous",6,21,28.57,1,5,1,0.17,36.5,6,23,4,3,-1.4,0.24,0.7,"no","G/T","No",1,31.23,"XP_976472.1:c.135T>G","XP_976472.1:p.Phe45Leu","LOC664065",664065,null,"664065 [Gene Symbol: LOC664065] [Locus Tag: TcasGA2_TC007962] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC664065] [Gene Type: protein-coding]","LOC664065; TcasGA2_TC007962"]
[439,"NC_007419.2",3220471,"SNV","A","G","Homozygous",20,20,100,1,15,8,0.35,39.8,23,23,12,15,null,1,1,"no","G/G","No",1,80.09,"XP_976472.1:c.484A>G","XP_976472.1:p.Asn162Asp","LOC664065",664065,null,"664065 [Gene Symbol: LOC664065] [Locus Tag: TcasGA2_TC007962] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC664065] [Gene Type: protein-coding]","LOC664065; TcasGA2_TC007962"]
[440,"NC_007419.2",3220482,"SNV","G","C","Homozygous",20,20,100,1,15,8,0.35,39.2,23,23,12,15,null,1,1,"no","C/C","No",1,80.11,"XP_976472.1:c.495G>C","XP_976472.1:p.Glu165Asp","LOC664065",664065,null,"664065 [Gene Symbol: LOC664065] [Locus Tag: TcasGA2_TC007962] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC664065] [Gene Type: protein-coding]","LOC664065; TcasGA2_TC007962"]
[441,"NC_007419.2",3220598,"SNV","G","A","Heterozygous",17,22,77.27,0.98,8,9,0.47,38.12,17,23,9,8,-0.59,0.98,1,"no","A/G","No",1,16.31,"XP_976472.1:c.611G>A","XP_976472.1:p.Gly204Glu","LOC664065",664065,null,"664065 [Gene Symbol: LOC664065] [Locus Tag: TcasGA2_TC007962] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC664065] [Gene Type: protein-coding]","LOC664065; TcasGA2_TC007962"]
[442,"NC_007419.2",3221037,"SNV","C","A","Homozygous",22,22,100,1,12,15,0.44,38.95,27,27,12,15,null,1,1,"no","A/A","No",1,87.7,"XP_015835101.1:c.[281C>A]; XP_015835102.1:c.[281C>A]","XP_015835101.1:p.[Ala94Glu]; XP_015835102.1:p.[Ala94Glu]","LOC103312576",103312576,null,"103312576 [Gene Symbol: LOC103312576] [Locus Tag: TcasGA2_TC030133] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312576] [Gene Type: protein-coding]","LOC103312576; TcGr36; TcGr34; TcasGA2_TC030133"]
[443,"NC_007419.2",3221090,"SNV","A","C","Heterozygous",5,20,25,0.99,1,4,0.2,39.4,5,22,3,4,0.79,0.2,0.48,"no","A/C","No",1,21.47,"XP_015835102.1:c.[334A>C]; XP_015835101.1:c.[334A>C]","XP_015835102.1:p.[Lys112Gln]; XP_015835101.1:p.[Lys112Gln]","LOC103312576",103312576,null,"103312576 [Gene Symbol: LOC103312576] [Locus Tag: TcasGA2_TC030133] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312576] [Gene Type: protein-coding]","LOC103312576; TcGr36; TcGr34; TcasGA2_TC030133"]
[444,"NC_007419.2",3247346,"SNV","T","A","Heterozygous",12,28,42.86,1,4,8,0.33,35.5,12,30,5,6,-0.97,0.71,0.94,"no","A/T","No",1,87.62,"XP_008191923.1:c.1628T>A","XP_008191923.1:p.Phe543Tyr","LOC664109",664109,null,"664109 [Gene Symbol: LOC664109] [Locus Tag: TcasGA2_TC007966] [Chromosome: LG4] [Map Location: ] [Description: arylsulfatase B] [Gene Type: protein-coding]","TcasGA2_TC007966; LOC664109"]
[445,"NC_007419.2","3292772..3292773","Deletion","CC","-","Homozygous",27,27,100,1,16,15,0.48,36.22,31,31,19,22,null,1,1,"no","-/-","No",1,200,"XP_008191926.1:c.30_31delCC","XP_008191926.1:p.Leu13fs","LOC664156",664156,null,"664156 [Gene Symbol: LOC664156] [Locus Tag: TcasGA2_TC007970] [Chromosome: LG4] [Map Location: ] [Description: protein angel] [Gene Type: protein-coding]","TcasGA2_TC007970; LOC664156"]
[446,"NC_007419.2",3314469,"SNV","A","C","Heterozygous",15,20,75,0.98,7,10,0.41,37.53,17,22,10,9,0.61,0.93,1,"no","A/C","No",1,17.18,"XP_975322.1:c.[383-422A>C]; XP_015834458.1:c.[909A>C]","XP_015834458.1:p.Glu303Asp","LOC664217, LOC103312569","664217 , 103312569",null,"664217 [Gene Symbol: LOC664217] [Locus Tag: TcasGA2_TC007974] [Chromosome: LG4] [Map Location: ] [Description: syntaxin-5] [Gene Type: protein-coding] || 103312569 [Gene Symbol: LOC103312569] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312569] [Gene Type: protein-coding]","LOC664217; TcasGA2_TC007974 || LOC103312569"]
[447,"NC_007419.2",3314698,"SNV","A","G","Heterozygous",9,21,42.86,1,4,8,0.33,39.89,12,30,8,8,1.42,0.57,0.94,"no","A/G","No",1,70.02,"XP_975322.1:c.[383-193A>G]; XP_015834458.1:c.[1138A>G]","XP_015834458.1:p.Lys380Glu","LOC664217, LOC103312569","664217 , 103312569",null,"664217 [Gene Symbol: LOC664217] [Locus Tag: TcasGA2_TC007974] [Chromosome: LG4] [Map Location: ] [Description: syntaxin-5] [Gene Type: protein-coding] || 103312569 [Gene Symbol: LOC103312569] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312569] [Gene Type: protein-coding]","LOC664217; TcasGA2_TC007974 || LOC103312569"]
[448,"NC_007419.2",3410096,"SNV","G","C","Heterozygous",6,20,30,1,1,5,0.17,39,6,21,2,2,0.99,0.08,0.4,"no","C/G","No",1,33.32,"XP_015834562.1:c.[1688C>G]; XP_015834561.1:c.[1772C>G]; XP_015834560.1:c.[1817C>G]; XP_008191932.1:c.[1817C>G]","XP_015834562.1:p.[Thr563Ser]; XP_015834561.1:p.[Thr591Ser]; XP_015834560.1:p.[Thr606Ser]; XP_008191932.1:p.[Thr606Ser]","LOC664270",664270,null,"664270 [Gene Symbol: LOC664270] [Locus Tag: TcasGA2_TC007523] [Chromosome: LG4] [Map Location: ] [Description: WD repeat-containing protein 19] [Gene Type: protein-coding]","TcasGA2_TC007523; LOC664270"]
[449,"NC_007419.2",3413453,"SNV","G","A","Homozygous",24,24,100,1,6,18,0.25,37.38,24,24,13,14,null,1,1,"no","A/A","No",1,93.72,"XP_975378.1:c.394G>A","XP_975378.1:p.Val132Ile","LOC664277",664277,null,"664277 [Gene Symbol: LOC664277] [Locus Tag: TcasGA2_TC007981] [Chromosome: LG4] [Map Location: ] [Description: lipase 3] [Gene Type: protein-coding]","LOC664277; TcasGA2_TC007981"]
[450,"NC_007419.2",3427575,"SNV","A","G","Homozygous",22,22,100,1,6,16,0.27,39.05,22,22,9,15,null,1,1,"no","G/G","No",1,86.11,"XP_975398.2:c.[3313T>C]; XP_008191939.1:c.[3007T>C]; XP_015834558.1:c.[3154T>C]; XP_008191938.1:c.[3250T>C]; XP_008191937.1:c.[3313T>C]; XP_015834559.1:c.[3313T>C]","XP_975398.2:p.[Ser1105Pro]; XP_008191939.1:p.[Ser1003Pro]; XP_015834558.1:p.[Ser1052Pro]; XP_008191938.1:p.[Ser1084Pro]; XP_008191937.1:p.[Ser1105Pro]; XP_015834559.1:p.[Ser1105Pro]","LOC664298",664298,null,"664298 [Gene Symbol: LOC664298] [Locus Tag: TcasGA2_TC007519] [Chromosome: LG4] [Map Location: ] [Description: AT-rich interactive domain-containing protein 2] [Gene Type: protein-coding]","LOC664298; TcasGA2_TC007519"]
[451,"NC_007419.2",3449763,"SNV","G","A","Heterozygous",5,21,23.81,0.98,0,5,0,38,5,21,1,2,0.08,0.12,0.33,"no","A/G","No",1,18.13,"XP_015834565.1:c.6337C>T","XP_015834565.1:p.Arg2113*","LOC664324",664324,null,"664324 [Gene Symbol: LOC664324] [Locus Tag: TcasGA2_TC007516] [Chromosome: LG4] [Map Location: ] [Description: dynein heavy chain 1, axonemal] [Gene Type: protein-coding]","TcasGA2_TC007516; LOC664324"]
[452,"NC_007419.2",3536198,"SNV","C","G","Heterozygous",6,24,25,0.99,6,3,0.33,36.5,9,29,6,3,-0.07,0.66,0.56,"no","C/G","No",1,22.28,"XP_008192005.1:c.343C>G","XP_008192005.1:p.Arg115Gly","LOC103312647",103312647,null,"103312647 [Gene Symbol: LOC103312647] [Locus Tag: TcasGA2_TC007990] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312647; TcasGA2_TC007990"]
[453,"NC_007419.2",3536217,"SNV","A","G","Homozygous",23,23,100,1,9,18,0.33,38.22,27,27,14,12,null,1,1,"no","G/G","No",1,89.12,"XP_008192005.1:c.362A>G","XP_008192005.1:p.Gln121Arg","LOC103312647",103312647,null,"103312647 [Gene Symbol: LOC103312647] [Locus Tag: TcasGA2_TC007990] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312647; TcasGA2_TC007990"]
[454,"NC_007419.2",3536234,"SNV","G","A","Heterozygous",5,23,21.74,0.95,4,3,0.43,37.4,7,28,5,2,-0.56,0.83,0.48,"no","A/G","No",1,12.8,"XP_008192005.1:c.379G>A","XP_008192005.1:p.Val127Ile","LOC103312647",103312647,null,"103312647 [Gene Symbol: LOC103312647] [Locus Tag: TcasGA2_TC007990] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312647; TcasGA2_TC007990"]
[455,"NC_007419.2",3555468,"SNV","T","A","Heterozygous",16,22,72.73,1,13,3,0.19,38.06,16,24,10,11,-0.77,0.63,0.61,"no","A/T","No",1,27.94,"XP_001810985.1:c.1523A>T","XP_001810985.1:p.His508Leu","LOC655519",655519,null,"655519 [Gene Symbol: LOC655519] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: 4-coumarate--CoA ligase 1-like] [Gene Type: protein-coding]","LOC655519"]
[456,"NC_007419.2",3555471,"SNV","C","A","Heterozygous",15,21,71.43,1,12,3,0.2,36.27,15,23,10,10,-2.14,0.63,0.63,"no","A/C","No",1,31.43,"XP_001810985.1:c.1520G>T","XP_001810985.1:p.Arg507Ile","LOC655519",655519,null,"655519 [Gene Symbol: LOC655519] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: 4-coumarate--CoA ligase 1-like] [Gene Type: protein-coding]","LOC655519"]
[457,"NC_007419.2",3642151,"SNV","G","A","Heterozygous",8,27,29.63,1,6,3,0.33,36.88,9,32,4,6,0.48,0.76,0.81,"no","A/G","No",1,39.67,"XP_015834995.1:c.107C>T","XP_015834995.1:p.Pro36Leu","LOC655597",655597,null,"655597 [Gene Symbol: LOC655597] [Locus Tag: TcasGA2_TC007505] [Chromosome: LG4] [Map Location: ] [Description: gamma-sarcoglycan] [Gene Type: protein-coding]","LOC655597; TcasGA2_TC007505"]
[458,"NC_007419.2",3671546,"SNV","C","G","Heterozygous",6,20,30,1,3,4,0.43,37.67,7,24,5,6,1.4,0.61,0.95,"no","C/G","No",1,33.38,"XP_015835073.1:c.[1364C>G]; XP_008192015.2:c.[989C>G]; XP_967505.2:c.[1355C>G]; XP_015835074.1:c.[1346C>G]","XP_015835073.1:p.[Thr455Ser]; XP_008192015.2:p.[Thr330Ser]; XP_967505.2:p.[Thr452Ser]; XP_015835074.1:p.[Thr449Ser]","LOC655850",655850,null,"655850 [Gene Symbol: LOC655850] [Locus Tag: TcasGA2_TC007996] [Chromosome: LG4] [Map Location: ] [Description: otopetrin-2] [Gene Type: protein-coding]","TcasGA2_TC007996; LOC655850"]
[459,"NC_007419.2",3694471,"SNV","A","T","Heterozygous",5,21,23.81,0.98,0,5,0,33.6,5,24,3,3,-2.56,0.31,0.68,"no","A/T","No",1,18.03,"XP_015835094.1:c.[974A>T]; XP_967818.2:c.[986A>T]","XP_015835094.1:p.[Glu325Val]; XP_967818.2:p.[Glu329Val]","LOC656180",656180,null,"656180 [Gene Symbol: LOC656180] [Locus Tag: TcasGA2_TC007998] [Chromosome: LG4] [Map Location: ] [Description: otopetrin-1] [Gene Type: protein-coding]","TcasGA2_TC007998; LOC656180"]
[460,"NC_007419.2",3707791,"SNV","A","T","Homozygous",25,25,100,1,7,18,0.28,37.76,25,25,13,15,null,1,1,"no","T/T","No",1,96.74,"XP_015834670.1:c.[130T>A]; XP_968051.2:c.[130T>A]","XP_015834670.1:p.[Ser44Thr]; XP_968051.2:p.[Ser44Thr]","LOC656425",656425,null,"656425 [Gene Symbol: LOC656425] [Locus Tag: TcasGA2_TC007499] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC656425] [Gene Type: protein-coding]","LOC656425; TcasGA2_TC007499"]
[461,"NC_007419.2","3712828..3712829","MNV","CT","AA","Heterozygous",13,20,65,1,4,9,0.31,38.04,13,20,6,7,null,0.96,0.89,"no","complex","No",1,200,"XP_015834668.1:c.[1383_1384delCTinsAA]; XP_015834669.1:c.[843_844delCTinsAA]","XP_015834668.1:p.[Asn461_Ser462delinsLysThr]; XP_015834669.1:p.[Asn281_Ser282delinsLysThr]","LOC100141608",100141608,null,"100141608 [Gene Symbol: LOC100141608] [Locus Tag: TcasGA2_TC008000] [Chromosome: LG4] [Map Location: ] [Description: acyl-CoA synthetase family member 4] [Gene Type: protein-coding]","LOC100141608; TcasGA2_TC008000"]
[462,"NC_007419.2",3764388,"SNV","A","G","Heterozygous",6,20,30,1,3,3,0.5,40.67,6,20,2,5,2.14,0.32,1,"no","A/G","No",1,34.53,"XP_001811750.1:c.508A>G","XP_001811750.1:p.Arg170Gly","LOC100141895",100141895,null,"100141895 [Gene Symbol: LOC100141895] [Locus Tag: TcasGA2_TC008002] [Chromosome: LG4] [Map Location: ] [Description: exonuclease 3'-5' domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC008002; LOC100141895"]
[463,"NC_007419.2",3782201,"SNV","A","G","Heterozygous",8,27,29.63,1,5,3,0.38,37.62,8,27,3,6,1.25,0.3,0.69,"no","A/G","No",1,40.57,"XP_976245.1:c.322A>G","XP_976245.1:p.Thr108Ala","LOC657405",657405,null,"657405 [Gene Symbol: LOC657405] [Locus Tag: TcasGA2_TC008005] [Chromosome: LG4] [Map Location: ] [Description: cuticle protein 16.5, isoform A] [Gene Type: protein-coding]","TcasGA2_TC008005; LOC657405"]
[464,"NC_007419.2",3782277,"SNV","C","A","Homozygous",25,25,100,1,8,17,0.32,36.12,25,25,12,19,null,1,1,"no","A/A","No",1,96.74,"XP_976245.1:c.398C>A","XP_976245.1:p.Pro133Gln","LOC657405",657405,null,"657405 [Gene Symbol: LOC657405] [Locus Tag: TcasGA2_TC008005] [Chromosome: LG4] [Map Location: ] [Description: cuticle protein 16.5, isoform A] [Gene Type: protein-coding]","TcasGA2_TC008005; LOC657405"]
[465,"NC_007419.2",4011962,"SNV","A","G","Homozygous",23,23,100,1,12,14,0.46,36.83,26,26,15,14,null,1,1,"no","G/G","No",1,89.12,"XP_008192048.1:c.2161A>G","XP_008192048.1:p.Ile721Val","LOC659578",659578,null,"659578 [Gene Symbol: LOC659578] [Locus Tag: TcasGA2_TC008022] [Chromosome: LG4] [Map Location: ] [Description: transmembrane protein 131] [Gene Type: protein-coding]","TcasGA2_TC008022; LOC659578"]
[466,"NC_007419.2",4065692,"SNV","C","T","Homozygous",24,24,100,1,20,5,0.2,37.04,25,25,12,16,null,1,1,"no","T/T","No",1,93.73,"XP_008192378.1:c.962C>T","XP_008192378.1:p.Ser321Phe","LOC103312731",103312731,null,"103312731 [Gene Symbol: LOC103312731] [Locus Tag: TcasGA2_TC032800] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312731] [Gene Type: protein-coding]","LOC103312731; TcasGA2_TC032800"]
[467,"NC_007419.2",4065730,"SNV","G","A","Homozygous",20,20,100,1,14,9,0.39,36,23,23,14,12,null,1,1,"no","A/A","No",1,81.69,"XP_008192378.1:c.1000G>A","XP_008192378.1:p.Ala334Thr","LOC103312731",103312731,null,"103312731 [Gene Symbol: LOC103312731] [Locus Tag: TcasGA2_TC032800] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312731] [Gene Type: protein-coding]","LOC103312731; TcasGA2_TC032800"]
[468,"NC_007419.2",4105233,"SNV","G","T","Heterozygous",5,21,23.81,0.97,0,5,0,41,5,21,1,1,1.86,0.6,0.81,"no","G/T","No",1,14.64,"XP_008192059.2:c.[805G>T]; XP_015835093.1:c.[805G>T]","XP_008192059.2:p.[Asp269Tyr]; XP_015835093.1:p.[Asp269Tyr]","LOC660654",660654,null,"660654 [Gene Symbol: LOC660654] [Locus Tag: TcasGA2_TC008032] [Chromosome: LG4] [Map Location: ] [Description: coiled-coil domain-containing protein 170] [Gene Type: protein-coding]","TcasGA2_TC008032; LOC660654"]
[469,"NC_007419.2",4105245,"SNV","G","C","Homozygous",21,21,100,1,2,19,0.1,39.9,21,21,5,6,null,1,1,"no","C/C","No",1,83.12,"XP_008192059.2:c.[817G>C]; XP_015835093.1:c.[817G>C]","XP_008192059.2:p.[Val273Leu]; XP_015835093.1:p.[Val273Leu]","LOC660654",660654,null,"660654 [Gene Symbol: LOC660654] [Locus Tag: TcasGA2_TC008032] [Chromosome: LG4] [Map Location: ] [Description: coiled-coil domain-containing protein 170] [Gene Type: protein-coding]","TcasGA2_TC008032; LOC660654"]
[470,"NC_007419.2",4131263,"SNV","G","A","Heterozygous",5,21,23.81,0.99,3,4,0.43,36,7,23,3,4,-2.15,0.06,0.28,"no","A/G","No",1,18.27,"XP_008192063.2:c.625C>T","XP_008192063.2:p.Arg209Cys","LOC100142303",100142303,null,"100142303 [Gene Symbol: LOC100142303] [Locus Tag: TcasGA2_TC007464] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142303] [Gene Type: protein-coding]","TcasGA2_TC007464; LOC100142303"]
[471,"NC_007419.2",4137901,"SNV","C","G","Homozygous",26,26,100,1,9,19,0.32,38.73,28,28,15,18,null,1,1,"no","G/G","No",1,98.15,"XP_008192060.1:c.517C>G","XP_008192060.1:p.Pro173Ala","LOC660927",660927,null,"660927 [Gene Symbol: LOC660927] [Locus Tag: TcasGA2_TC008035] [Chromosome: LG4] [Map Location: ] [Description: multidrug resistance-associated protein 7] [Gene Type: protein-coding]","LOC660927; TcasGA2_TC008035"]
[472,"NC_007419.2",4264846,"SNV","T","A","Homozygous",20,20,100,1,14,6,0.3,39.35,20,20,13,16,null,1,1,"no","A/A","No",1,81.69,"XP_008192072.1:c.[1001A>T]; XP_008192073.1:c.[953A>T]","XP_008192072.1:p.[Tyr334Phe]; XP_008192073.1:p.[Tyr318Phe]","LOC103312659",103312659,null,"103312659 [Gene Symbol: LOC103312659] [Locus Tag: TcasGA2_TC007456] [Chromosome: LG4] [Map Location: ] [Description: zinc finger protein 112] [Gene Type: protein-coding]","LOC103312659; TcasGA2_TC007456"]
[473,"NC_007419.2",4265269,"SNV","C","T","Heterozygous",9,21,42.86,1,3,8,0.27,38.44,11,24,5,6,0.21,0.09,0.74,"no","C/T","No",1,68.88,"XP_008192072.1:c.[578G>A]; XP_008192073.1:c.[530G>A]","XP_008192072.1:p.[Arg193Lys]; XP_008192073.1:p.[Arg177Lys]","LOC103312659",103312659,null,"103312659 [Gene Symbol: LOC103312659] [Locus Tag: TcasGA2_TC007456] [Chromosome: LG4] [Map Location: ] [Description: zinc finger protein 112] [Gene Type: protein-coding]","LOC103312659; TcasGA2_TC007456"]
[474,"NC_007419.2",4265282,"SNV","T","C","Heterozygous",14,23,60.87,1,10,5,0.33,37.5,15,27,8,10,-0.66,0.34,0.7,"no","C/T","No",1,63.35,"XP_008192072.1:c.[565A>G]; XP_008192073.1:c.[517A>G]","XP_008192072.1:p.[Lys189Glu]; XP_008192073.1:p.[Lys173Glu]","LOC103312659",103312659,null,"103312659 [Gene Symbol: LOC103312659] [Locus Tag: TcasGA2_TC007456] [Chromosome: LG4] [Map Location: ] [Description: zinc finger protein 112] [Gene Type: protein-coding]","LOC103312659; TcasGA2_TC007456"]
[475,"NC_007419.2",4270196,"SNV","T","G","Homozygous",25,25,100,1,17,13,0.43,36.92,30,30,15,20,null,1,1,"no","G/G","No",1,95.14,"XP_972622.1:c.[118T>G]; XP_008192070.1:c.[118T>G]","XP_972622.1:p.[Ser40Ala]; XP_008192070.1:p.[Ser40Ala]","LOC661368",661368,null,"661368 [Gene Symbol: LOC661368] [Locus Tag: TcasGA2_TC008045] [Chromosome: LG4] [Map Location: ] [Description: coronin-7] [Gene Type: protein-coding]","LOC661368; TcasGA2_TC008045"]
[476,"NC_007419.2","4347953..4347954","MNV","TT","CC","Homozygous",28,28,100,1,19,13,0.41,35.79,32,32,14,17,null,1,1,"no","CC/CC","No",1,200,"XP_001814289.1:c.[1730_1731delTTinsCC]; XP_015834883.1:c.[1661_1662delTTinsCC]","XP_001814289.1:p.[Ile577Thr]; XP_015834883.1:p.[Ile554Thr]","LOC100142575",100142575,null,"100142575 [Gene Symbol: LOC100142575] [Locus Tag: TcasGA2_TC008051] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142575] [Gene Type: protein-coding]","LOC100142575; TcasGA2_TC008051"]
[477,"NC_007419.2",4409170,"SNV","G","A","Heterozygous",10,24,41.67,1,8,4,0.33,38.4,12,30,8,9,0.97,0.92,1,"no","A/G","No",1,73.42,"XP_008192382.1:c.1135G>A","XP_008192382.1:p.Val379Met","LOC662185",662185,null,"662185 [Gene Symbol: LOC662185] [Locus Tag: TcasGA2_TC032806] [Chromosome: LG4] [Map Location: ] [Description: TWiK family of potassium channels protein 9] [Gene Type: protein-coding]","LOC662185; TcasGA2_TC032806"]
[478,"NC_007419.2",4679274,"SNV","T","A","Homozygous",22,22,100,1,5,20,0.2,38.73,25,25,8,10,null,1,1,"no","A/A","No",1,87.71,"XP_008192115.1:c.[1210A>T]; XP_008192117.1:c.[1132A>T]; XP_008192116.1:c.[1204A>T]; XP_008192113.1:c.[1210A>T]","XP_008192115.1:p.[Thr404Ser]; XP_008192117.1:p.[Thr378Ser]; XP_008192116.1:p.[Thr402Ser]; XP_008192113.1:p.[Thr404Ser]","LOC663093",663093,null,"663093 [Gene Symbol: LOC663093] [Locus Tag: TcasGA2_TC007427] [Chromosome: LG4] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","TcasGA2_TC007427; LOC663093"]
[479,"NC_007419.2","4751131..4751132","MNV","AA","GG","Heterozygous",15,21,71.43,1,8,7,0.47,39.53,15,21,8,13,null,0.88,1,"no","complex","No",1,200,"XP_974350.1:c.1720_1721delTTinsCC","XP_974350.1:p.Leu574Pro","LOC663199",663199,null,"663199 [Gene Symbol: LOC663199] [Locus Tag: TcasGA2_TC007421] [Chromosome: LG4] [Map Location: ] [Description: RNA-binding protein 28] [Gene Type: protein-coding]","LOC663199; TcasGA2_TC007421"]
[480,"NC_007419.2","4751131..4751133","MNV","AAG","GGA","Heterozygous",6,21,28.57,1,2,4,0.33,38.44,6,21,4,6,null,0.65,0.91,"no","complex","No",1,200,"XP_974350.1:c.1719_1721delCTTinsTCC","XP_974350.1:p.Leu574Pro","LOC663199",663199,null,"663199 [Gene Symbol: LOC663199] [Locus Tag: TcasGA2_TC007421] [Chromosome: LG4] [Map Location: ] [Description: RNA-binding protein 28] [Gene Type: protein-coding]","LOC663199; TcasGA2_TC007421"]
[481,"NC_007419.2",4975744,"SNV","G","A","Heterozygous",8,22,36.36,1,1,8,0.11,40.62,9,25,3,6,2.49,0.03,0.81,"no","A/G","No",1,53.51,"XP_974764.1:c.1090G>A","XP_974764.1:p.Asp364Asn","LOC663633",663633,null,"663633 [Gene Symbol: LOC663633] [Locus Tag: TcasGA2_TC008092] [Chromosome: LG4] [Map Location: ] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","LOC663633; TcasGA2_TC008092"]
[482,"NC_007419.2",4995423,"Deletion","A","-","Heterozygous",9,20,45,1,3,7,0.3,38.11,10,21,7,9,-1.6,0.45,1,"no","-/A","Yes",3,70.82,"XP_008192137.1:c.569delA","XP_008192137.1:p.Met191fs","LOC103312668",103312668,null,"103312668 [Gene Symbol: LOC103312668] [Locus Tag: TcasGA2_TC008097] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312668; TcasGA2_TC008097"]
[483,"NC_007419.2",4995437,"SNV","G","C","Homozygous",20,20,100,1,6,15,0.29,38.7,21,21,12,16,null,1,1,"no","C/C","No",1,80.12,"XP_008192137.1:c.583G>C","XP_008192137.1:p.Glu195Gln","LOC103312668",103312668,null,"103312668 [Gene Symbol: LOC103312668] [Locus Tag: TcasGA2_TC008097] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312668; TcasGA2_TC008097"]
[484,"NC_007419.2",5023166,"SNV","G","A","Heterozygous",6,20,30,1,5,1,0.17,38.17,6,24,4,6,-0.25,0.64,0.54,"no","A/G","No",1,33.67,"XP_015834326.1:c.305G>A","XP_015834326.1:p.Gly102Glu","LOC663765, LOC663775","663765 , 663775",null,"663765 [Gene Symbol: LOC663765] [Locus Tag: TcasGA2_TC007403] [Chromosome: LG4] [Map Location: ] [Description: probable glutamine-dependent NAD(+) synthetase] [Gene Type: protein-coding] || 663775 [Gene Symbol: LOC663775] [Locus Tag: TcasGA2_TC008100] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC663775] [Gene Type: protein-coding]","TcasGA2_TC007403; LOC663765 || LOC663775; TcasGA2_TC008100"]
[485,"NC_007419.2",5052172,"SNV","A","T","Homozygous",18,20,90,0.99,12,13,0.48,37.5,25,27,9,10,null,0.98,1,"no","T/T","No",1,19.5,"XP_015834463.1:c.6829A>T","XP_015834463.1:p.Met2277Leu","LOC663896",663896,null,"663896 [Gene Symbol: LOC663896] [Locus Tag: TcasGA2_TC008109] [Chromosome: LG4] [Map Location: ] [Description: cytoplasmic dynein 2 heavy chain 1] [Gene Type: protein-coding]","TcasGA2_TC008109; LOC663896"]
[486,"NC_007419.2",5052197,"SNV","A","G","Homozygous",22,23,95.65,1,14,16,0.47,37.86,30,31,12,12,null,1,1,"no","G/G","No",1,61.55,"XP_015834463.1:c.6854A>G","XP_015834463.1:p.Asn2285Ser","LOC663896",663896,null,"663896 [Gene Symbol: LOC663896] [Locus Tag: TcasGA2_TC008109] [Chromosome: LG4] [Map Location: ] [Description: cytoplasmic dynein 2 heavy chain 1] [Gene Type: protein-coding]","TcasGA2_TC008109; LOC663896"]
[487,"NC_007419.2",5058231,"SNV","C","G","Heterozygous",10,20,50,1,7,3,0.3,37,10,20,4,6,-1.29,0.87,1,"no","C/G","No",1,81.39,"XP_015834463.1:c.11733C>G","XP_015834463.1:p.Asp3911Glu","LOC663896",663896,null,"663896 [Gene Symbol: LOC663896] [Locus Tag: TcasGA2_TC008109] [Chromosome: LG4] [Map Location: ] [Description: cytoplasmic dynein 2 heavy chain 1] [Gene Type: protein-coding]","TcasGA2_TC008109; LOC663896"]
[488,"NC_007419.2",5069288,"SNV","G","A","Homozygous",22,22,100,1,6,17,0.26,38.55,23,23,12,16,null,1,1,"no","A/A","No",1,87.71,"XP_001815774.1:c.109G>A","XP_001815774.1:p.Val37Ile","LOC100141744",100141744,null,"100141744 [Gene Symbol: LOC100141744] [Locus Tag: TcasGA2_TC008111] [Chromosome: LG4] [Map Location: ] [Description: gem-associated protein 5] [Gene Type: protein-coding]","LOC100141744; TcasGA2_TC008111"]
[489,"NC_007419.2",5513244,"SNV","T","C","Heterozygous",5,22,22.73,0.98,4,2,0.33,37.4,6,24,5,5,-0.16,0.6,0.67,"no","C/T","No",1,16.46,"XP_015834900.1:c.[1429A>G]; XP_975373.2:c.[1825A>G]","XP_015834900.1:p.[Thr477Ala]; XP_975373.2:p.[Thr609Ala]","LOC664271",664271,null,"664271 [Gene Symbol: LOC664271] [Locus Tag: TcasGA2_TC007370] [Chromosome: LG4] [Map Location: ] [Description: insulin-like receptor] [Gene Type: protein-coding]","TcasGA2_TC007370; LOC664271; ilr2"]
[490,"NC_007419.2",5513270,"SNV","T","C","Heterozygous",5,20,25,0.99,1,4,0.2,39.8,5,22,4,4,1.44,0.77,0.78,"no","C/T","No",1,21.96,"XP_015834900.1:c.[1403A>G]; XP_975373.2:c.[1799A>G]","XP_015834900.1:p.[Lys468Arg]; XP_975373.2:p.[Lys600Arg]","LOC664271",664271,null,"664271 [Gene Symbol: LOC664271] [Locus Tag: TcasGA2_TC007370] [Chromosome: LG4] [Map Location: ] [Description: insulin-like receptor] [Gene Type: protein-coding]","TcasGA2_TC007370; LOC664271; ilr2"]
[491,"NC_007419.2",5514510,"SNV","A","T","Heterozygous",9,31,29.03,1,9,1,0.1,34.89,10,33,5,7,-1.89,0.56,0.4,"no","A/T","No",1,41.14,"XP_015834900.1:c.[211T>A]; XP_975373.2:c.[607T>A]","XP_015834900.1:p.[Ser71Thr]; XP_975373.2:p.[Ser203Thr]","LOC664271",664271,null,"664271 [Gene Symbol: LOC664271] [Locus Tag: TcasGA2_TC007370] [Chromosome: LG4] [Map Location: ] [Description: insulin-like receptor] [Gene Type: protein-coding]","TcasGA2_TC007370; LOC664271; ilr2"]
[492,"NC_007419.2",5514521,"SNV","T","C","Heterozygous",6,29,20.69,0.9,6,1,0.14,38.67,7,30,4,5,0.24,0.53,0.64,"no","C/T","No",1,10.1,"XP_975373.2:c.[596A>G]; XP_015834900.1:c.[200A>G]","XP_975373.2:p.[Lys199Arg]; XP_015834900.1:p.[Lys67Arg]","LOC664271",664271,null,"664271 [Gene Symbol: LOC664271] [Locus Tag: TcasGA2_TC007370] [Chromosome: LG4] [Map Location: ] [Description: insulin-like receptor] [Gene Type: protein-coding]","TcasGA2_TC007370; LOC664271; ilr2"]
[493,"NC_007419.2",5547836,"SNV","T","C","Heterozygous",8,26,30.77,1,3,6,0.33,38.5,9,30,5,8,2.03,0.54,0.72,"no","C/T","No",1,43.5,"XP_975382.1:c.263A>G","XP_975382.1:p.Asp88Gly","LOC664282",664282,null,"664282 [Gene Symbol: LOC664282] [Locus Tag: TcasGA2_TC007369] [Chromosome: LG4] [Map Location: ] [Description: D-beta-hydroxybutyrate dehydrogenase, mitochondrial] [Gene Type: protein-coding]","LOC664282; TcasGA2_TC007369"]
[494,"NC_007419.2",5775738,"SNV","A","C","Heterozygous",15,25,60,1,0,15,0,38.33,15,27,5,7,0.55,0.64,0.37,"no","A/C","No",1,66.93,"XP_008192213.1:c.[1162T>G]; XP_008192215.1:c.[820T>G]; XP_008192217.1:c.[673T>G]; XP_008192214.1:c.[1093T>G]","XP_008192213.1:p.[Ser388Ala]; XP_008192215.1:p.[Ser274Ala]; XP_008192217.1:p.[Ser225Ala]; XP_008192214.1:p.[Ser365Ala]","LOC103312685",103312685,null,"103312685 [Gene Symbol: LOC103312685] [Locus Tag: TcasGA2_TC007354] [Chromosome: LG4] [Map Location: ] [Description: titin homolog] [Gene Type: protein-coding]","TcasGA2_TC007354; LOC103312685"]
[495,"NC_007419.2","5803369..5803371","Deletion","TTA","-","Heterozygous",9,21,42.86,1,3,7,0.3,37,10,24,6,7,-0.34,0.93,0.83,"no","complex","No",1,200,"XP_975464.2:c.2049_2051delTAA","XP_975464.2:p.Asn684del","LOC664362",664362,null,"664362 [Gene Symbol: LOC664362] [Locus Tag: TcasGA2_TC007351] [Chromosome: LG4] [Map Location: ] [Description: spondin-1] [Gene Type: protein-coding]","LOC664362; TcasGA2_TC007351"]
[496,"NC_007419.2",6162582,"SNV","A","G","Heterozygous",7,23,30.43,1,7,0,0,37.71,7,23,2,5,0.33,0.16,0.67,"no","A/G","No",1,38.84,"XP_008192256.1:c.538A>G","XP_008192256.1:p.Ile180Val","LOC103312696",103312696,null,"103312696 [Gene Symbol: LOC103312696] [Locus Tag: TcasGA2_TC008181] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC008181; LOC103312696"]
[497,"NC_007419.2",6162586,"SNV","T","C","Heterozygous",14,21,66.67,1,9,5,0.36,36.71,14,21,9,12,0.41,0.79,0.87,"no","C/T","No",1,43.42,"XP_008192256.1:c.542T>C","XP_008192256.1:p.Val181Ala","LOC103312696",103312696,null,"103312696 [Gene Symbol: LOC103312696] [Locus Tag: TcasGA2_TC008181] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC008181; LOC103312696"]
[498,"NC_007419.2",6226886,"SNV","T","G","Heterozygous",5,20,25,0.99,0,5,0,38.2,5,26,1,2,-1.83,0.15,0.38,"no","G/T","No",1,21.3,"XP_015834502.1:c.[295-19062T>G]; XP_008192263.1:c.[295-19062T>G]; XP_015834498.1:c.[295-19062T>G]; XP_015834511.1:c.[1187A>C]; XP_015834503.1:c.[295-19062T>G]; XP_015834499.1:c.[295-19062T>G]; XP_015834501.1:c.[295-19062T>G]; XP_015834500.1:c.[295-19062T>G]","XP_015834511.1:p.Lys396Thr","LOC664485, LOC107397748","664485 , 107397748",null,"664485 [Gene Symbol: LOC664485] [Locus Tag: TcasGA2_TC008184] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized protein CG43867] [Gene Type: protein-coding] || 107397748 [Gene Symbol: LOC107397748] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable cytochrome P450 6a20] [Gene Type: protein-coding]","TcasGA2_TC008184; LOC664485 || LOC107397748"]
[499,"NC_007419.2",6287483,"SNV","G","T","Homozygous",20,20,100,1,13,9,0.41,38.15,22,22,12,17,null,1,1,"no","T/T","No",1,81.7,"XP_015834332.1:c.1000C>A","XP_015834332.1:p.His334Asn","LOC103312745",103312745,null,"103312745 [Gene Symbol: LOC103312745] [Locus Tag: TcasGA2_TC007307] [Chromosome: LG4] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC103312745; TcasGA2_TC007307"]
[500,"NC_007419.2",6310221,"SNV","G","T","Heterozygous",13,21,61.9,1,3,11,0.21,38.08,14,23,8,9,0.94,0.89,0.99,"no","G/T","No",1,56.81,"XP_008192273.1:c.[949C>A]; XP_008192274.1:c.[949C>A]; XP_008192276.1:c.[901C>A]; XP_008192277.1:c.[727C>A]; XP_008192272.1:c.[949C>A]","XP_008192273.1:p.[Leu317Ile]; XP_008192274.1:p.[Leu317Ile]; XP_008192276.1:p.[Leu301Ile]; XP_008192277.1:p.[Leu243Ile]; XP_008192272.1:p.[Leu317Ile]","LOC664496",664496,null,"664496 [Gene Symbol: LOC664496] [Locus Tag: TcasGA2_TC007305] [Chromosome: LG4] [Map Location: ] [Description: anoctamin-1] [Gene Type: protein-coding]","TcasGA2_TC007305; LOC664496"]
[501,"NC_007419.2",6322252,"SNV","T","C","Heterozygous",5,22,22.73,0.98,3,4,0.43,37.8,7,24,3,3,-0.39,0.5,0.88,"no","C/T","No",1,16.47,"XP_015834685.1:c.91A>G","XP_015834685.1:p.Lys31Glu","LOC664500",664500,null,"664500 [Gene Symbol: LOC664500] [Locus Tag: TcasGA2_TC007303] [Chromosome: LG4] [Map Location: ] [Description: uridine diphosphate glucose pyrophosphatase] [Gene Type: protein-coding]","LOC664500; TcasGA2_TC007303"]
[502,"NC_007419.2",6349177,"SNV","T","G","Heterozygous",15,28,53.57,1,11,6,0.35,38.6,17,30,9,9,-0.18,0.81,1,"no","G/T","No",1,97.03,"XP_008192282.1:c.538T>G","XP_008192282.1:p.Ser180Ala","LOC664506",664506,null,"664506 [Gene Symbol: LOC664506] [Locus Tag: TcasGA2_TC008189] [Chromosome: LG4] [Map Location: ] [Description: DNA-directed RNA polymerase III subunit RPC3] [Gene Type: protein-coding]","TcasGA2_TC008189; LOC664506"]
[503,"NC_007419.2",6436116,"SNV","T","C","Homozygous",21,23,91.3,1,11,14,0.44,37.1,25,27,15,14,null,1,1,"no","C/C","No",1,32.87,"XP_008192291.1:c.2834A>G","XP_008192291.1:p.Asn945Ser","LOC103312701",103312701,null,"103312701 [Gene Symbol: LOC103312701] [Locus Tag: TcasGA2_TC007293] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312701] [Gene Type: protein-coding]","TcasGA2_TC007293; LOC103312701"]
[504,"NC_007419.2","6633760..6633761","MNV","CA","GT","Heterozygous",7,23,30.43,1,4,4,0.5,36.64,8,24,4,7,null,0.86,0.92,"no","complex","No",1,200,"XP_015834333.1:c.2709_2710delTGinsAC","XP_015834333.1:p.Gly904Arg","LOC100141964",100141964,null,"100141964 [Gene Symbol: LOC100141964] [Locus Tag: TcasGA2_TC007273] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: elastin] [Gene Type: protein-coding]","LOC100141964; TcasGA2_TC007273"]
[505,"NC_007419.2",6633823,"SNV","C","T","Heterozygous",10,24,41.67,1,6,5,0.45,38.1,11,25,5,8,-0.03,0.2,0.6,"no","C/T","No",1,73.26,"XP_015834333.1:c.2647G>A","XP_015834333.1:p.Gly883Arg","LOC100141964",100141964,null,"100141964 [Gene Symbol: LOC100141964] [Locus Tag: TcasGA2_TC007273] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: elastin] [Gene Type: protein-coding]","LOC100141964; TcasGA2_TC007273"]
[506,"NC_007419.2",6660458,"SNV","C","T","Homozygous",21,21,100,1,15,12,0.44,39.67,27,27,12,13,null,1,1,"no","T/T","No",1,84.7,"XP_015834808.1:c.398G>A","XP_015834808.1:p.Ser133Asn","LOC107397801",107397801,null,"107397801 [Gene Symbol: LOC107397801] [Locus Tag: TcasGA2_TC030426] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397801] [Gene Type: protein-coding]","LOC107397801; TcasGA2_TC030426; Or313"]
[507,"NC_007419.2",6713700,"SNV","G","A","Heterozygous",14,20,70,1,12,4,0.25,35.79,16,22,6,7,-1.32,0.62,0.89,"no","A/G","No",1,34.55,"XP_001816522.1:c.703G>A","XP_001816522.1:p.Gly235Ser","LOC100142439",100142439,null,"100142439 [Gene Symbol: LOC100142439] [Locus Tag: TcasGA2_TC008208] [Chromosome: LG4] [Map Location: ] [Description: elastin] [Gene Type: protein-coding]","LOC100142439; TcasGA2_TC008208"]
[508,"NC_007419.2",6737517,"SNV","T","A","Heterozygous",5,20,25,0.99,2,3,0.4,39,5,20,4,5,1,0.93,1,"no","A/T","No",1,20.66,"XP_008192323.1:c.1284A>T","XP_008192323.1:p.Glu428Asp","LOC100142501",100142501,null,"100142501 [Gene Symbol: LOC100142501] [Locus Tag: TcasGA2_TC032845] [Chromosome: LG4] [Map Location: ] [Description: UDP-glucuronosyltransferase 2C1] [Gene Type: protein-coding]","TcasGA2_TC032845; LOC100142501"]
[509,"NC_007419.2",6754282,"SNV","T","G","Homozygous",20,20,100,1,13,10,0.43,37.7,23,23,14,20,null,1,1,"no","G/G","No",1,80.09,"XP_001816525.1:c.[549A>C]; XP_015834996.1:c.[549A>C]; XP_008192327.1:c.[549A>C]; XP_008192326.1:c.[549A>C]; XP_015834997.1:c.[549A>C]","XP_001816525.1:p.[Gln183His]; XP_015834996.1:p.[Gln183His]; XP_008192327.1:p.[Gln183His]; XP_008192326.1:p.[Gln183His]; XP_015834997.1:p.[Gln183His]","LOC100141541",100141541,null,"100141541 [Gene Symbol: LOC100141541] [Locus Tag: TcasGA2_TC007258] [Chromosome: LG4] [Map Location: ] [Description: pupal cuticle protein 36] [Gene Type: protein-coding]","TcasGA2_TC007258; LOC100141541"]
[510,"NC_007419.2",6912741,"SNV","T","C","Heterozygous",7,20,35,1,0,7,0,40.14,7,20,2,4,2.42,0.03,0.2,"no","C/T","No",1,47.46,"XP_008192352.1:c.[274A>G]; XP_008192349.1:c.[274A>G]; XP_975643.1:c.[274A>G]; XP_008192347.1:c.[274A>G]; XP_008192354.1:c.[274A>G]; XP_008192351.1:c.[274A>G]; XP_008192350.1:c.[274A>G]; XP_008192353.1:c.[274A>G]","XP_008192352.1:p.[Ile92Val]; XP_008192349.1:p.[Ile92Val]; XP_975643.1:p.[Ile92Val]; XP_008192347.1:p.[Ile92Val]; XP_008192354.1:p.[Ile92Val]; XP_008192351.1:p.[Ile92Val]; XP_008192350.1:p.[Ile92Val]; XP_008192353.1:p.[Ile92Val]","LOC664554",664554,null,"664554 [Gene Symbol: LOC664554] [Locus Tag: TcasGA2_TC007250] [Chromosome: LG4] [Map Location: ] [Description: interference hedgehog] [Gene Type: protein-coding]","TcasGA2_TC007250; LOC664554"]
[511,"NC_007419.2",6941571,"SNV","A","C","Homozygous",18,22,81.82,0.64,9,10,0.47,38.22,19,23,7,10,null,0.73,0.98,"no","C/T","No",1,4.39,"XP_008192355.1:c.[2580T>G]; XP_975645.2:c.[2562T>G]","XP_008192355.1:p.[His860Gln]; XP_975645.2:p.[His854Gln]","LOC664556",664556,null,"664556 [Gene Symbol: LOC664556] [Locus Tag: TcasGA2_TC007248] [Chromosome: LG4] [Map Location: ] [Description: nuclear factor related to kappa-B-binding protein] [Gene Type: protein-coding]","TcasGA2_TC007248; LOC664556"]
[512,"NC_007419.2",6946357,"SNV","C","T","Heterozygous",11,26,42.31,1,11,1,0.08,39.27,12,27,6,8,0.16,0.04,0.03,"no","C/T","No",1,80.37,"XP_008192357.1:c.[1237G>A]; XP_008192356.1:c.[1261G>A]","XP_008192357.1:p.[Val413Ile]; XP_008192356.1:p.[Val421Ile]","LOC664559",664559,null,"664559 [Gene Symbol: LOC664559] [Locus Tag: TcasGA2_TC007247] [Chromosome: LG4] [Map Location: ] [Description: croquemort] [Gene Type: protein-coding]","TcasGA2_TC007247; LOC664559; crq"]
[513,"NC_007419.2","7091697^7091698","Insertion","-","A","Heterozygous",7,23,30.43,1,7,2,0.22,36,9,26,4,6,0.23,0.67,0.8,"no","-/A","No",1,38.48,"XP_008192500.1:c.[176_177insA]; XP_008192501.1:c.[176_177insA]","XP_008192500.1:p.[Ile60fs]; XP_008192501.1:p.[Ile60fs]","LOC655677",655677,null,"655677 [Gene Symbol: LOC655677] [Locus Tag: TcasGA2_TC008234] [Chromosome: LG4] [Map Location: ] [Description: spidroin-1] [Gene Type: protein-coding]","LOC655677; TcasGA2_TC008234"]
[514,"NC_007419.2","7091698^7091699","Insertion","-","CT","Heterozygous",8,24,33.33,1,7,3,0.3,37.62,10,27,5,9,1.9,0.76,0.93,"no","complex","No",1,200,"XP_008192501.1:c.[177_178insCT]; XP_008192500.1:c.[177_178insCT]","XP_008192501.1:p.[Ile60fs]; XP_008192500.1:p.[Ile60fs]","LOC655677",655677,null,"655677 [Gene Symbol: LOC655677] [Locus Tag: TcasGA2_TC008234] [Chromosome: LG4] [Map Location: ] [Description: spidroin-1] [Gene Type: protein-coding]","LOC655677; TcasGA2_TC008234"]
[515,"NC_007419.2",7091701,"SNV","C","G","Heterozygous",9,24,37.5,0.65,4,6,0.4,37.22,10,27,5,7,0.26,0.64,0.73,"no","G/T","No",1,4.51,"XP_008192501.1:c.[180C>G]; XP_008192500.1:c.[180C>G]","XP_008192501.1:p.[Ile60Met]; XP_008192500.1:p.[Ile60Met]","LOC655677",655677,null,"655677 [Gene Symbol: LOC655677] [Locus Tag: TcasGA2_TC008234] [Chromosome: LG4] [Map Location: ] [Description: spidroin-1] [Gene Type: protein-coding]","LOC655677; TcasGA2_TC008234"]
[516,"NC_007419.2",7092570,"SNV","G","A","Heterozygous",9,20,45,1,7,3,0.3,39,10,23,5,8,1.14,0.73,0.96,"no","A/G","No",1,71.7,"XP_008192500.1:c.[1049G>A]; XP_008192501.1:c.[1049G>A]","XP_008192500.1:p.[Gly350Glu]; XP_008192501.1:p.[Gly350Glu]","LOC655677",655677,null,"655677 [Gene Symbol: LOC655677] [Locus Tag: TcasGA2_TC008234] [Chromosome: LG4] [Map Location: ] [Description: spidroin-1] [Gene Type: protein-coding]","LOC655677; TcasGA2_TC008234"]
[517,"NC_007419.2",7093097,"SNV","T","A","Heterozygous",7,21,33.33,1,4,5,0.44,36.43,9,28,5,5,-1.49,0.37,0.97,"no","A/T","No",1,43.34,"XP_008192501.1:c.[1576T>A]; XP_008192500.1:c.[1576T>A]","XP_008192501.1:p.[Leu526Ile]; XP_008192500.1:p.[Leu526Ile]","LOC655677",655677,null,"655677 [Gene Symbol: LOC655677] [Locus Tag: TcasGA2_TC008234] [Chromosome: LG4] [Map Location: ] [Description: spidroin-1] [Gene Type: protein-coding]","LOC655677; TcasGA2_TC008234"]
[518,"NC_007419.2",7142527,"SNV","T","C","Homozygous",25,25,100,1,3,23,0.12,35.52,26,26,11,16,null,1,1,"no","C/C","No",1,95.16,"XP_015834336.1:c.131T>C","XP_015834336.1:p.Leu44Pro","LOC107397718",107397718,null,"107397718 [Gene Symbol: LOC107397718] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: fibrous sheath CABYR-binding protein-like] [Gene Type: protein-coding]","LOC107397718"]
[519,"NC_007419.2",7171062,"SNV","G","A","Heterozygous",10,20,50,1,4,6,0.4,36.8,10,21,5,5,-0.79,0.49,0.99,"no","A/G","No",1,81.98,"XP_015834640.1:c.[4682C>T]; XP_015834639.1:c.[4682C>T]; XP_015834641.1:c.[4679C>T]; XP_015834644.1:c.[4574C>T]; XP_015834638.1:c.[4682C>T]; XP_015834642.1:c.[4682C>T]; XP_015834646.1:c.[3086C>T]; XP_015834647.1:c.[2618C>T]; XP_015834643.1:c.[4682C>T]; XP_015834645.1:c.[3857C>T]","XP_015834640.1:p.[Thr1561Ile]; XP_015834639.1:p.[Thr1561Ile]; XP_015834641.1:p.[Thr1560Ile]; XP_015834644.1:p.[Thr1525Ile]; XP_015834638.1:p.[Thr1561Ile]; XP_015834642.1:p.[Thr1561Ile]; XP_015834646.1:p.[Thr1029Ile]; XP_015834647.1:p.[Thr873Ile]; XP_015834643.1:p.[Thr1561Ile]; XP_015834645.1:p.[Thr1286Ile]","LOC656932",656932,null,"656932 [Gene Symbol: LOC656932] [Locus Tag: TcasGA2_TC007231] [Chromosome: LG4] [Map Location: ] [Description: mucin-2] [Gene Type: protein-coding]","TcasGA2_TC007231; LOC656932"]
[520,"NC_007419.2",7172143,"SNV","C","T","Heterozygous",13,20,65,1,7,11,0.39,37.46,18,25,7,6,-0.83,0.55,0.96,"no","C/T","No",1,47.41,"XP_015834639.1:c.[3952G>A]; XP_015834644.1:c.[3952G>A]; XP_015834638.1:c.[3952G>A]; XP_015834642.1:c.[3952G>A]; XP_015834643.1:c.[3952G>A]; XP_015834647.1:c.[2380-843G>A]; XP_015834645.1:c.[3618+334G>A]; XP_015834641.1:c.[3949G>A]; XP_015834646.1:c.[2848-843G>A]; XP_015834640.1:c.[3952G>A]","XP_015834639.1:p.[Gly1318Ser]; XP_015834644.1:p.[Gly1318Ser]; XP_015834638.1:p.[Gly1318Ser]; XP_015834642.1:p.[Gly1318Ser]; XP_015834643.1:p.[Gly1318Ser]; XP_015834641.1:p.[Gly1317Ser]; XP_015834640.1:p.[Gly1318Ser]","LOC656932",656932,null,"656932 [Gene Symbol: LOC656932] [Locus Tag: TcasGA2_TC007231] [Chromosome: LG4] [Map Location: ] [Description: mucin-2] [Gene Type: protein-coding]","TcasGA2_TC007231; LOC656932"]
[521,"NC_007419.2",7172178,"SNV","G","A","Heterozygous",6,21,28.57,1,3,6,0.33,34.83,9,26,3,2,-2.41,0.02,0.98,"no","A/G","No",1,30.92,"XP_015834642.1:c.[3917C>T]; XP_015834638.1:c.[3917C>T]; XP_015834647.1:c.[2380-878C>T]; XP_015834645.1:c.[3618+299C>T]; XP_015834640.1:c.[3917C>T]; XP_015834641.1:c.[3914C>T]; XP_015834639.1:c.[3917C>T]; XP_015834646.1:c.[2848-878C>T]; XP_015834643.1:c.[3917C>T]; XP_015834644.1:c.[3917C>T]","XP_015834642.1:p.[Pro1306Leu]; XP_015834638.1:p.[Pro1306Leu]; XP_015834640.1:p.[Pro1306Leu]; XP_015834641.1:p.[Pro1305Leu]; XP_015834639.1:p.[Pro1306Leu]; XP_015834643.1:p.[Pro1306Leu]; XP_015834644.1:p.[Pro1306Leu]","LOC656932",656932,null,"656932 [Gene Symbol: LOC656932] [Locus Tag: TcasGA2_TC007231] [Chromosome: LG4] [Map Location: ] [Description: mucin-2] [Gene Type: protein-coding]","TcasGA2_TC007231; LOC656932"]
[522,"NC_007419.2",7172649,"SNV","G","A","Heterozygous",10,23,43.48,1,10,0,0,38.3,10,23,6,8,1.12,0.32,0.36,"no","A/G","No",1,76.17,"XP_015834643.1:c.[3446C>T]; XP_015834647.1:c.[2380-1349C>T]; XP_015834642.1:c.[3446C>T]; XP_015834640.1:c.[3446C>T]; XP_015834646.1:c.[2847+599C>T]; XP_015834639.1:c.[3446C>T]; XP_015834644.1:c.[3446C>T]; XP_015834641.1:c.[3443C>T]; XP_015834645.1:c.[3446C>T]; XP_015834638.1:c.[3446C>T]","XP_015834643.1:p.[Pro1149Leu]; XP_015834642.1:p.[Pro1149Leu]; XP_015834640.1:p.[Pro1149Leu]; XP_015834639.1:p.[Pro1149Leu]; XP_015834644.1:p.[Pro1149Leu]; XP_015834641.1:p.[Pro1148Leu]; XP_015834645.1:p.[Pro1149Leu]; XP_015834638.1:p.[Pro1149Leu]","LOC656932",656932,null,"656932 [Gene Symbol: LOC656932] [Locus Tag: TcasGA2_TC007231] [Chromosome: LG4] [Map Location: ] [Description: mucin-2] [Gene Type: protein-coding]","TcasGA2_TC007231; LOC656932"]
[523,"NC_007419.2",7251650,"SNV","T","G","Heterozygous",13,27,48.15,1,11,3,0.21,37,14,28,7,8,-0.51,0.82,1,"no","G/T","No",1,93.91,"XP_008192538.1:c.[1768A>C]; XP_015835078.1:c.[1768A>C]; XP_015835077.1:c.[1768A>C]; XP_015835076.1:c.[1768A>C]","XP_008192538.1:p.[Asn590His]; XP_015835078.1:p.[Asn590His]; XP_015835077.1:p.[Asn590His]; XP_015835076.1:p.[Asn590His]","LOC658035",658035,null,"658035 [Gene Symbol: LOC658035] [Locus Tag: TcasGA2_TC007226] [Chromosome: LG4] [Map Location: ] [Description: peroxidasin-like protein] [Gene Type: protein-coding]","TcasGA2_TC007226; LOC658035"]
[524,"NC_007419.2",7538131,"SNV","C","T","Heterozygous",7,29,24.14,0.99,6,3,0.33,34,9,35,5,5,-2.93,0.16,0.9,"no","C/T","No",1,21.26,"XP_008192549.1:c.469G>A","XP_008192549.1:p.Ala157Thr","Grd, LOC103312802","659976 , 103312802","GABA-gated ion channel","659976 [Gene Symbol: Grd] [Locus Tag: TcasGA2_TC008266] [Chromosome: LG4] [Map Location: ] [Description: GABA-gated ion channel] [Gene Type: protein-coding] || 103312802 [Gene Symbol: LOC103312802] [Locus Tag: TcasGA2_TC007207] [Chromosome: LG4] [Map Location: ] [Description: serine/arginine repetitive matrix protein 4] [Gene Type: protein-coding]","TcasGA2_TC008266; Grd || LOC103312802; TcasGA2_TC007207"]
[525,"NC_007419.2",7538133,"SNV","G","A","Heterozygous",8,33,24.24,0.99,7,3,0.3,35.88,10,39,5,5,-1.55,0.52,0.72,"no","A/G","No",1,22.95,"XP_008192549.1:c.467C>T","XP_008192549.1:p.Ala156Val","Grd, LOC103312802","659976 , 103312802","GABA-gated ion channel","659976 [Gene Symbol: Grd] [Locus Tag: TcasGA2_TC008266] [Chromosome: LG4] [Map Location: ] [Description: GABA-gated ion channel] [Gene Type: protein-coding] || 103312802 [Gene Symbol: LOC103312802] [Locus Tag: TcasGA2_TC007207] [Chromosome: LG4] [Map Location: ] [Description: serine/arginine repetitive matrix protein 4] [Gene Type: protein-coding]","TcasGA2_TC008266; Grd || LOC103312802; TcasGA2_TC007207"]
[526,"NC_007419.2",7538280,"SNV","C","T","Homozygous",19,21,90.48,0.99,6,13,0.32,35.68,19,21,9,9,null,0.91,1,"no","T/T","No",1,21.61,"XP_008192549.1:c.320G>A","XP_008192549.1:p.Arg107Gln","Grd, LOC103312802","659976 , 103312802","GABA-gated ion channel","659976 [Gene Symbol: Grd] [Locus Tag: TcasGA2_TC008266] [Chromosome: LG4] [Map Location: ] [Description: GABA-gated ion channel] [Gene Type: protein-coding] || 103312802 [Gene Symbol: LOC103312802] [Locus Tag: TcasGA2_TC007207] [Chromosome: LG4] [Map Location: ] [Description: serine/arginine repetitive matrix protein 4] [Gene Type: protein-coding]","TcasGA2_TC008266; Grd || LOC103312802; TcasGA2_TC007207"]
[527,"NC_007419.2",7630317,"SNV","A","T","Homozygous",22,22,100,1,16,9,0.36,38.86,25,25,10,16,null,1,1,"no","T/T","No",1,87.71,"XP_008192565.1:c.474A>T","XP_008192565.1:p.Leu158Phe","LOC660709",660709,null,"660709 [Gene Symbol: LOC660709] [Locus Tag: TcasGA2_TC008271] [Chromosome: LG4] [Map Location: ] [Description: 39S ribosomal protein L28, mitochondrial] [Gene Type: protein-coding]","LOC660709; TcasGA2_TC008271"]
[528,"NC_007419.2",7630725,"SNV","A","G","Homozygous",28,28,100,1,11,18,0.38,39.46,29,29,18,17,null,1,1,"no","G/G","No",1,104.17,"XP_008192565.1:c.775A>G","XP_008192565.1:p.Ser259Gly","LOC660709",660709,null,"660709 [Gene Symbol: LOC660709] [Locus Tag: TcasGA2_TC008271] [Chromosome: LG4] [Map Location: ] [Description: 39S ribosomal protein L28, mitochondrial] [Gene Type: protein-coding]","LOC660709; TcasGA2_TC008271"]
[529,"NC_007419.2",7853539,"SNV","C","T","Homozygous",23,23,100,1,20,6,0.23,36.3,26,26,14,17,null,1,1,"no","T/T","No",1,87.71,"XP_015834678.1:c.[2215G>A]; XP_008192574.1:c.[2212G>A]; XP_972707.2:c.[2215G>A]","XP_015834678.1:p.[Ala739Thr]; XP_008192574.1:p.[Ala738Thr]; XP_972707.2:p.[Ala739Thr]","LOC661459",661459,null,"661459 [Gene Symbol: LOC661459] [Locus Tag: TcasGA2_TC007192] [Chromosome: LG4] [Map Location: ] [Description: transcription factor SPT20 homolog] [Gene Type: protein-coding]","LOC661459; TcasGA2_TC007192"]
[530,"NC_007419.2",7868809,"SNV","C","T","Homozygous",19,20,95,1,10,10,0.5,38.63,20,21,12,12,null,0.99,1,"no","T/T","No",1,50.04,"XP_015834679.1:c.1981C>T","XP_015834679.1:p.His661Tyr","LOC103312777",103312777,null,"103312777 [Gene Symbol: LOC103312777] [Locus Tag: TcasGA2_TC008283] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312777] [Gene Type: protein-coding]","TcasGA2_TC008283; LOC103312777"]
[531,"NC_007419.2",7869526,"SNV","G","T","Homozygous",20,20,100,1,12,11,0.48,38.1,23,23,9,13,null,1,1,"no","T/T","No",1,81.7,"XP_015834679.1:c.2602G>T","XP_015834679.1:p.Gly868Cys","LOC103312777",103312777,null,"103312777 [Gene Symbol: LOC103312777] [Locus Tag: TcasGA2_TC008283] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312777] [Gene Type: protein-coding]","TcasGA2_TC008283; LOC103312777"]
[532,"NC_007419.2",7879259,"SNV","G","C","Homozygous",21,22,95.45,1,12,12,0.5,36.71,24,25,9,12,null,1,1,"no","C/C","No",1,54.89,"XP_015834337.1:c.1688C>G","XP_015834337.1:p.Thr563Arg","LOC661718",661718,null,"661718 [Gene Symbol: LOC661718] [Locus Tag: TcasGA2_TC007187] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC661718] [Gene Type: protein-coding]","LOC661718; TcasGA2_TC007187"]
[533,"NC_007419.2",7880940,"SNV","G","C","Heterozygous",12,20,60,1,3,10,0.23,36.33,13,21,7,11,0.31,0.99,1,"no","C/G","No",1,58.96,"XP_015834337.1:c.231C>G","XP_015834337.1:p.Phe77Leu","LOC661718",661718,null,"661718 [Gene Symbol: LOC661718] [Locus Tag: TcasGA2_TC007187] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC661718] [Gene Type: protein-coding]","LOC661718; TcasGA2_TC007187"]
[534,"NC_007419.2","7885240..7885241","MNV","GG","CA","Homozygous",23,23,100,1,11,14,0.44,39.2,25,25,19,20,null,1,1,"no","CA/CA","No",1,200,"XP_973063.1:c.288_289delCCinsTG","XP_973063.1:p.Gln97Glu","LOC661837",661837,null,"661837 [Gene Symbol: LOC661837] [Locus Tag: TcasGA2_TC032875] [Chromosome: LG4] [Map Location: ] [Description: lipase 1-like] [Gene Type: protein-coding]","LOC661837; TcasGA2_TC032875"]
[535,"NC_007419.2",7889231,"SNV","A","G","Homozygous",19,21,90.48,1,9,12,0.43,38.53,21,24,10,13,null,0.99,1,"no","G/G","No",1,25.11,"XP_008192578.1:c.1027T>C","XP_008192578.1:p.*343Arg","LOC661923",661923,null,"661923 [Gene Symbol: LOC661923] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: lipase 3-like] [Gene Type: protein-coding]","LOC661923"]
[536,"NC_007419.2",7889237,"SNV","T","C","Homozygous",19,21,90.48,1,9,12,0.43,38.47,21,24,10,13,null,1,1,"no","C/C","No",1,25.43,"XP_008192578.1:c.1021A>G","XP_008192578.1:p.Ile341Val","LOC661923",661923,null,"661923 [Gene Symbol: LOC661923] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: lipase 3-like] [Gene Type: protein-coding]","LOC661923"]
[537,"NC_007419.2",8095610,"SNV","G","C","Heterozygous",15,20,75,0.99,0,15,0,39.4,15,20,5,7,1.79,0.26,0.16,"no","C/G","No",1,20.63,"XP_015834616.1:c.[2782C>G]; XP_008192609.1:c.[2782C>G]; XP_008192606.1:c.[2782C>G]; XP_008192610.1:c.[2782C>G]; XP_008192607.1:c.[2782C>G]; XP_008192605.1:c.[2782C>G]; XP_008192611.1:c.[2782C>G]; XP_015834615.1:c.[2782C>G]","XP_015834616.1:p.[Gln928Glu]; XP_008192609.1:p.[Gln928Glu]; XP_008192606.1:p.[Gln928Glu]; XP_008192610.1:p.[Gln928Glu]; XP_008192607.1:p.[Gln928Glu]; XP_008192605.1:p.[Gln928Glu]; XP_008192611.1:p.[Gln928Glu]; XP_015834615.1:p.[Gln928Glu]","LOC661354",661354,null,"661354 [Gene Symbol: LOC661354] [Locus Tag: TcasGA2_TC007173] [Chromosome: LG4] [Map Location: ] [Description: spectrin beta chain] [Gene Type: protein-coding]","LOC661354; TcasGA2_TC007173"]
[538,"NC_007419.2",8126475,"SNV","C","T","Homozygous",20,22,90.91,1,6,14,0.3,37.2,20,22,12,17,null,1,1,"no","T/T","No",1,24.2,"XP_008192480.2:c.50C>T","XP_008192480.2:p.Ala17Val","LOC662703",662703,null,"662703 [Gene Symbol: LOC662703] [Locus Tag: TcasGA2_TC008300] [Chromosome: LG4] [Map Location: ] [Description: 1,5-anhydro-D-fructose reductase] [Gene Type: protein-coding]","TcasGA2_TC008300; LOC662703"]
[539,"NC_007419.2",8283163,"SNV","T","C","Heterozygous",20,30,66.67,1,7,13,0.35,38.45,20,33,10,10,1.08,0.81,0.92,"no","C/T","No",1,56.57,"XP_974173.2:c.[590-10723T>C]; XP_015835010.1:c.[280+236A>G]; XP_015835009.1:c.[470A>G]","XP_015835009.1:p.Asn157Ser","LOC663015, LOC107397843","663015 , 107397843",null,"663015 [Gene Symbol: LOC663015] [Locus Tag: TcasGA2_TC008308] [Chromosome: LG4] [Map Location: ] [Description: carbonic anhydrase-related protein 10] [Gene Type: protein-coding] || 107397843 [Gene Symbol: LOC107397843] [Locus Tag: TcasGA2_TC031112] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397843] [Gene Type: protein-coding]","LOC663015; TcasGA2_TC008308 || TcasGA2_TC031112; LOC107397843"]
[540,"NC_007419.2",8434529,"SNV","A","C","Heterozygous",6,21,28.57,1,0,6,0,38.17,6,22,3,3,0.12,0.98,0.52,"no","A/C","No",1,31.43,"XP_974574.1:c.941A>C","XP_974574.1:p.Lys314Thr","LOC663435",663435,null,"663435 [Gene Symbol: LOC663435] [Locus Tag: TcasGA2_TC008318] [Chromosome: LG4] [Map Location: ] [Description: actin related protein 11] [Gene Type: protein-coding]","TcasGA2_TC008318; LOC663435; Arp11"]
[541,"NC_007419.2",8472499,"SNV","T","C","Homozygous",35,35,100,1,16,29,0.36,36.31,45,45,19,21,null,1,1,"no","C/C","No",1,125.24,"XP_015834761.1:c.[1061T>C]; XP_015834758.1:c.[1151T>C]; XP_008192646.1:c.[857T>C]; XP_015834764.1:c.[965T>C]; XP_015834759.1:c.[1109T>C]; XP_015834757.1:c.[1151T>C]; XP_015834767.1:c.[1151T>C]; XP_015834763.1:c.[977T>C]; XP_015834765.1:c.[965T>C]; XP_015834762.1:c.[1043T>C]; XP_015834760.1:c.[1085T>C]; XP_008192645.1:c.[857T>C]; XP_015834769.1:c.[716T>C]; XP_015834766.1:c.[1151T>C]; XP_015834768.1:c.[1151T>C]","XP_015834761.1:p.[Ile354Thr]; XP_015834758.1:p.[Ile384Thr]; XP_008192646.1:p.[Ile286Thr]; XP_015834764.1:p.[Ile322Thr]; XP_015834759.1:p.[Ile370Thr]; XP_015834757.1:p.[Ile384Thr]; XP_015834767.1:p.[Ile384Thr]; XP_015834763.1:p.[Ile326Thr]; XP_015834765.1:p.[Ile322Thr]; XP_015834762.1:p.[Ile348Thr]; XP_015834760.1:p.[Ile362Thr]; XP_008192645.1:p.[Ile286Thr]; XP_015834769.1:p.[Ile239Thr]; XP_015834766.1:p.[Ile384Thr]; XP_015834768.1:p.[Ile384Thr]","LOC663563",663563,null,"663563 [Gene Symbol: LOC663563] [Locus Tag: TcasGA2_TC008323] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC663563] [Gene Type: protein-coding]","TcasGA2_TC008323; LOC663563"]
[542,"NC_007419.2",8690097,"SNV","A","G","Heterozygous",10,32,31.25,1,5,8,0.38,39.1,13,35,6,7,0.51,0.17,0.79,"no","A/G","No",1,56.04,"XP_015834829.1:c.73A>G","XP_015834829.1:p.Ile25Val","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[543,"NC_007419.2",8690226,"Deletion","T","-","Heterozygous",6,20,30,1,4,3,0.43,38,7,23,4,4,-0.12,0.28,1,"no","-/T","Yes",6,32.58,"XP_015834829.1:c.202delT","XP_015834829.1:p.Pro70fs","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[544,"NC_007419.2","8691007^8691008","Insertion","-","TT","Heterozygous",7,22,31.82,1,4,6,0.4,35.36,10,27,5,6,-3.65,0.05,0.48,"no","complex","Yes",7,200,"XP_015834829.1:c.983_984insTT","XP_015834829.1:p.Gly331fs","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[545,"NC_007419.2",8691177,"SNV","G","A","Heterozygous",14,49,28.57,1,11,9,0.45,39.29,20,55,12,14,1.34,0.69,1,"no","A/G","No",1,54.6,"XP_015834829.1:c.1153G>A","XP_015834829.1:p.Asp385Asn","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[546,"NC_007419.2",8691213,"SNV","G","A","Heterozygous",13,56,23.21,0.99,10,3,0.23,38.85,13,62,7,8,-0.37,0.04,0.97,"no","A/G","No",1,22.33,"XP_015834829.1:c.1189G>A","XP_015834829.1:p.Val397Ile","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[547,"NC_007419.2",8691216,"SNV","A","T","Homozygous",56,56,100,1,45,17,0.27,39.34,62,62,36,38,null,1,1,"no","T/T","No",1,159.55,"XP_015834829.1:c.1192A>T","XP_015834829.1:p.Met398Leu","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[548,"NC_007419.2",8691243,"SNV","G","A","Heterozygous",18,53,33.96,1,11,9,0.45,39.17,20,63,11,10,0.58,0.67,0.75,"no","A/G","No",1,94.35,"XP_015834829.1:c.1219G>A","XP_015834829.1:p.Val407Ile","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[549,"NC_007419.2",8691265,"SNV","G","A","Heterozygous",15,48,31.25,1,12,10,0.45,39.2,22,64,9,11,0.02,0.73,0.99,"no","A/G","No",1,70.11,"XP_015834829.1:c.1241G>A","XP_015834829.1:p.Gly414Asp","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[550,"NC_007419.2",8691333,"SNV","C","T","Heterozygous",19,50,38,1,12,8,0.4,39.21,20,55,14,16,1.2,0.24,0.67,"no","C/T","No",1,118.04,"XP_015834829.1:c.1309C>T","XP_015834829.1:p.Pro437Ser","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[551,"NC_007419.2",8691343,"SNV","G","A","Heterozygous",12,54,22.22,0.97,8,4,0.33,39.25,12,60,8,10,1.54,0.36,0.55,"no","A/G","No",1,15.33,"XP_015834829.1:c.1319G>A","XP_015834829.1:p.Arg440His","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[552,"NC_007419.2",8691358,"SNV","C","T","Heterozygous",12,56,21.43,0.9,4,9,0.31,38.25,13,61,7,8,0.15,0.72,0.71,"no","C/T","No",1,10.03,"XP_015834829.1:c.1334C>T","XP_015834829.1:p.Thr445Ile","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[553,"NC_007419.2",8691396,"SNV","G","A","Heterozygous",16,63,25.4,1,14,2,0.12,38.94,16,71,9,13,0.62,0.18,0.09,"no","A/G","No",1,40.94,"XP_015834829.1:c.1372G>A","XP_015834829.1:p.Gly458Ser","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[554,"NC_007419.2",8691412,"SNV","T","G","Homozygous",49,57,85.96,1,31,24,0.44,38.47,55,65,31,34,null,1,1,"no","G/G","No",1,47.56,"XP_015834829.1:c.1388T>G","XP_015834829.1:p.Leu463Arg","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[555,"NC_007419.2",8691416,"SNV","A","T","Heterozygous",21,52,40.38,1,11,14,0.44,39.86,25,61,15,15,1.96,0.84,0.89,"no","A/T","No",1,135.82,"XP_015834829.1:c.1392A>T","XP_015834829.1:p.Leu464Phe","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[556,"NC_007419.2",8691520,"SNV","A","G","Homozygous",61,68,89.71,1,29,40,0.42,38.23,69,82,37,40,null,1,1,"no","G/G","No",1,87.38,"XP_015834829.1:c.1496A>G","XP_015834829.1:p.Tyr499Cys","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[557,"NC_007419.2",8691532,"SNV","T","C","Homozygous",62,69,89.86,1,31,36,0.46,38.39,67,79,38,41,null,1,1,"no","C/C","No",1,90.34,"XP_015834829.1:c.1508T>C","XP_015834829.1:p.Leu503Pro","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[558,"NC_007419.2",8691555,"Deletion","A","-","Heterozygous",30,74,40.54,1,19,12,0.39,37.43,31,84,20,21,-0.61,0.54,0.49,"no","-/A","Yes",6,200,"XP_015834829.1:c.1531delA","XP_015834829.1:p.Lys512fs","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[559,"NC_007419.2",8691580,"SNV","A","T","Heterozygous",26,63,41.27,1,14,13,0.48,36.73,27,74,20,19,-0.47,0.33,0.82,"no","A/T","No",1,200,"XP_015834829.1:c.1556A>T","XP_015834829.1:p.Tyr519Phe","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[560,"NC_007419.2",8691586,"Deletion","A","-","Heterozygous",24,57,42.11,1,13,12,0.48,37.08,25,67,18,17,-0.92,0.61,0.82,"no","-/A","Yes",5,156.54,"XP_015834829.1:c.1562delA","XP_015834829.1:p.Glu523fs","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[561,"NC_007419.2",8914080,"SNV","T","C","Heterozygous",5,22,22.73,0.98,4,1,0.2,37.8,5,23,3,3,0.74,0.08,0.25,"no","C/T","No",1,16.45,"XP_975065.2:c.[40+2645T>C]; XP_015834885.1:c.[3944A>G]","XP_015834885.1:p.Asn1315Ser","LOC663945, LOC100142143","663945 , 100142143",null,"663945 [Gene Symbol: LOC663945] [Locus Tag: TcasGA2_TC008349] [Chromosome: LG4] [Map Location: ] [Description: RWD domain-containing protein 2A] [Gene Type: protein-coding] || 100142143 [Gene Symbol: LOC100142143] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142143] [Gene Type: protein-coding]","LOC663945; TcasGA2_TC008349 || LOC100142143"]
[562,"NC_007419.2",8917864,"SNV","G","A","Homozygous",20,20,100,1,8,13,0.38,39.85,21,21,11,12,null,1,1,"no","A/A","No",1,81.69,"XP_015834885.1:c.[482C>T]; XP_975065.2:c.[41-251G>A]","XP_015834885.1:p.Ser161Leu","LOC663945, LOC100142143","663945 , 100142143",null,"663945 [Gene Symbol: LOC663945] [Locus Tag: TcasGA2_TC008349] [Chromosome: LG4] [Map Location: ] [Description: RWD domain-containing protein 2A] [Gene Type: protein-coding] || 100142143 [Gene Symbol: LOC100142143] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142143] [Gene Type: protein-coding]","LOC663945; TcasGA2_TC008349 || LOC100142143"]
[563,"NC_007419.2",8955581,"SNV","G","A","Heterozygous",9,23,39.13,1,8,2,0.2,36.56,10,32,6,6,-0.69,0.48,0.73,"no","A/G","No",1,63.52,"XP_015834655.1:c.[476G>A]; XP_015834654.1:c.[503G>A]; XP_015834656.1:c.[476G>A]","XP_015834655.1:p.[Arg159Gln]; XP_015834654.1:p.[Arg168Gln]; XP_015834656.1:p.[Arg159Gln]","LOC107397770",107397770,null,"107397770 [Gene Symbol: LOC107397770] [Locus Tag: TcasGA2_TC008352] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397770] [Gene Type: protein-coding]","TcasGA2_TC008352; LOC107397770"]
[564,"NC_007419.2",8955601,"SNV","G","A","Heterozygous",10,26,38.46,1,6,8,0.43,35.6,14,34,6,5,-1.08,0.3,0.94,"no","A/G","No",1,68.01,"XP_015834654.1:c.[523G>A]; XP_015834655.1:c.[496G>A]; XP_015834656.1:c.[496G>A]","XP_015834654.1:p.[Asp175Asn]; XP_015834655.1:p.[Asp166Asn]; XP_015834656.1:p.[Asp166Asn]","LOC107397770",107397770,null,"107397770 [Gene Symbol: LOC107397770] [Locus Tag: TcasGA2_TC008352] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397770] [Gene Type: protein-coding]","TcasGA2_TC008352; LOC107397770"]
[565,"NC_007419.2",9231780,"SNV","A","G","Heterozygous",11,20,55,1,6,5,0.45,36.36,11,20,8,6,-1.86,0.04,0.65,"no","A/G","No",1,71.68,"XP_015834691.1:c.[1657T>C]; XP_015834690.1:c.[1657T>C]","XP_015834691.1:p.[Ser553Pro]; XP_015834690.1:p.[Ser553Pro]","LOC664279",664279,null,"664279 [Gene Symbol: LOC664279] [Locus Tag: TcasGA2_TC007111] [Chromosome: LG4] [Map Location: ] [Description: YLP motif-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC007111; LOC664279"]
[566,"NC_007419.2",9633889,"SNV","C","G","Heterozygous",18,24,75,0.99,9,10,0.47,37.83,19,25,9,10,1.1,0.9,0.98,"no","C/G","No",1,22.15,"XP_008192759.1:c.[84C>G]; XP_008192760.1:c.[78C>G]; XP_008192762.1:c.[84C>G]","XP_008192759.1:p.[Asp28Glu]; XP_008192760.1:p.[Asp26Glu]; XP_008192762.1:p.[Asp28Glu]","LOC103312841",103312841,null,"103312841 [Gene Symbol: LOC103312841] [Locus Tag: TcasGA2_TC008388] [Chromosome: LG4] [Map Location: ] [Description: protein CHROMATIN REMODELING 20] [Gene Type: protein-coding]","LOC103312841; TcasGA2_TC008388"]
[567,"NC_007419.2",9643389,"SNV","A","G","Heterozygous",16,24,66.67,1,7,9,0.44,37.5,16,24,8,11,0.03,0.86,0.99,"no","A/G","No",1,47.95,"XP_008192763.1:c.832T>C","XP_008192763.1:p.Ser278Pro","LOC655851",655851,null,"655851 [Gene Symbol: LOC655851] [Locus Tag: TcasGA2_TC007093] [Chromosome: LG4] [Map Location: ] [Description: protein YIPF1] [Gene Type: protein-coding]","LOC655851; TcasGA2_TC007093"]
[568,"NC_007419.2",9673183,"SNV","A","G","Heterozygous",7,21,33.33,1,4,3,0.43,39.29,7,21,3,4,0.71,0.12,0.9,"no","A/G","No",1,44.46,"XP_968130.4:c.2159A>G","XP_968130.4:p.Gln720Arg","LOC656511",656511,null,"656511 [Gene Symbol: LOC656511] [Locus Tag: TcasGA2_TC008395] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC656511; TcasGA2_TC008395"]
[569,"NC_007419.2",9716823,"SNV","C","T","Homozygous",21,21,100,1,12,9,0.43,38.1,21,21,10,12,null,1,1,"no","T/T","No",1,84.7,"XP_008192771.1:c.[1618G>A]; XP_015834346.1:c.[1369G>A]; XP_008192769.1:c.[1708G>A]; XP_008192770.1:c.[1618G>A]; XP_008192775.1:c.[1369G>A]; XP_015834345.1:c.[1516G>A]; XP_008192774.1:c.[1537G>A]; XP_015834344.1:c.[1543G>A]; XP_008192772.1:c.[1618G>A]","XP_008192771.1:p.[Ala540Thr]; XP_015834346.1:p.[Ala457Thr]; XP_008192769.1:p.[Ala570Thr]; XP_008192770.1:p.[Ala540Thr]; XP_008192775.1:p.[Ala457Thr]; XP_015834345.1:p.[Ala506Thr]; XP_008192774.1:p.[Ala513Thr]; XP_015834344.1:p.[Ala515Thr]; XP_008192772.1:p.[Ala540Thr]","LOC657019",657019,null,"657019 [Gene Symbol: LOC657019] [Locus Tag: TcasGA2_TC007088] [Chromosome: LG4] [Map Location: ] [Description: apoptosis-stimulating of p53 protein 1] [Gene Type: protein-coding]","LOC657019; TcasGA2_TC007088"]
[570,"NC_007419.2",9808947,"SNV","G","A","Homozygous",26,26,100,1,19,8,0.3,37.69,27,27,12,19,null,1,1,"no","A/A","No",1,99.74,"XP_008192769.1:c.[75+899C>T]; XP_001809578.1:c.[325G>A]","XP_001809578.1:p.Ala109Thr","LOC657019, LOC100142512","657019 , 100142512",null,"657019 [Gene Symbol: LOC657019] [Locus Tag: TcasGA2_TC007088] [Chromosome: LG4] [Map Location: ] [Description: apoptosis-stimulating of p53 protein 1] [Gene Type: protein-coding] || 100142512 [Gene Symbol: LOC100142512] [Locus Tag: TcasGA2_TC008401] [Chromosome: LG4] [Map Location: ] [Description: cuticle protein CP14.6] [Gene Type: protein-coding]","LOC657019; TcasGA2_TC007088 || LOC100142512; TcasGA2_TC008401"]
[571,"NC_007419.2",9980337,"SNV","T","C","Homozygous",24,24,100,1,10,19,0.34,37.92,29,29,14,13,null,1,1,"no","C/C","No",1,92.15,"XP_008192894.1:c.4372A>G","XP_008192894.1:p.Thr1458Ala","LOC103312877",103312877,null,"103312877 [Gene Symbol: LOC103312877] [Locus Tag: TcasGA2_TC007081] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312877] [Gene Type: protein-coding]","TcasGA2_TC007081; LOC103312877; Nasrat"]
[572,"NC_007419.2",10095615,"SNV","G","A","Homozygous",20,20,100,1,8,17,0.32,38.65,25,25,9,10,null,1,1,"no","A/A","No",1,81.68,"XP_015834339.1:c.1774G>A","XP_015834339.1:p.Asp592Asn","LOC100141557",100141557,null,"100141557 [Gene Symbol: LOC100141557] [Locus Tag: TcasGA2_TC008427] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100141557] [Gene Type: protein-coding]","LOC100141557; TcasGA2_TC008427"]
[573,"NC_007419.2",10116192,"SNV","C","T","Homozygous",20,20,100,1,12,10,0.45,37.5,22,22,14,17,null,1,1,"no","T/T","No",1,81.7,"XP_008192826.1:c.239G>A","XP_008192826.1:p.Arg80Lys","LOC103312855",103312855,null,"103312855 [Gene Symbol: LOC103312855] [Locus Tag: TcasGA2_TC032936] [Chromosome: LG4] [Map Location: ] [Description: monocarboxylate transporter 4-like] [Gene Type: protein-coding]","LOC103312855; TcasGA2_TC032936"]
[574,"NC_007419.2",10263515,"SNV","G","T","Heterozygous",12,43,27.91,1,9,4,0.31,39.17,13,51,9,9,1.49,0.28,0.39,"no","G/T","No",1,42.48,"XP_015834340.1:c.413C>A","XP_015834340.1:p.Thr138Asn","LOC107397719",107397719,null,"107397719 [Gene Symbol: LOC107397719] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: odorant receptor Or1-like] [Gene Type: protein-coding]","LOC107397719"]
[575,"NC_007419.2",10263584,"SNV","C","G","Heterozygous",9,20,45,1,7,2,0.22,38.78,9,24,5,7,2.92,0.23,0.61,"no","C/G","No",1,71.7,"XP_015834340.1:c.344G>C","XP_015834340.1:p.Gly115Ala","LOC107397719",107397719,null,"107397719 [Gene Symbol: LOC107397719] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: odorant receptor Or1-like] [Gene Type: protein-coding]","LOC107397719"]
[576,"NC_007419.2",10530184,"SNV","C","G","Heterozygous",5,21,23.81,0.98,2,3,0.4,34.2,5,22,3,2,-0.95,0.32,0.61,"no","C/G","No",1,17.89,"XP_015835042.1:c.[1196G>C]; XP_015835041.1:c.[1196G>C]; XP_015835043.1:c.[1196G>C]; XP_973327.1:c.[1196G>C]; XP_015835039.1:c.[1196G>C]; XP_015835040.1:c.[1196G>C]","XP_015835042.1:p.[Arg399Pro]; XP_015835041.1:p.[Arg399Pro]; XP_015835043.1:p.[Arg399Pro]; XP_973327.1:p.[Arg399Pro]; XP_015835039.1:p.[Arg399Pro]; XP_015835040.1:p.[Arg399Pro]","LOC662117",662117,null,"662117 [Gene Symbol: LOC662117] [Locus Tag: TcasGA2_TC007053] [Chromosome: LG4] [Map Location: ] [Description: leucine-rich repeat-containing protein 24] [Gene Type: protein-coding]","LOC662117; TcasGA2_TC007053"]
[577,"NC_007419.2",10624018,"SNV","C","T","Heterozygous",6,22,27.27,1,6,1,0.14,39.83,7,26,2,4,1.88,0.08,0.19,"no","C/T","No",1,27.91,"XP_008192848.1:c.553G>A","XP_008192848.1:p.Val185Ile","LOC662150",662150,null,"662150 [Gene Symbol: LOC662150] [Locus Tag: TcasGA2_TC007050] [Chromosome: LG4] [Map Location: ] [Description: cell adhesion molecule 3] [Gene Type: protein-coding]","TcasGA2_TC007050; LOC662150; beat-IIIc"]
[578,"NC_007419.2",11190390,"SNV","T","A","Homozygous",21,21,100,1,6,19,0.24,37.52,25,25,11,11,null,1,1,"no","A/A","No",1,84.7,"XP_974377.1:c.39T>A","XP_974377.1:p.Phe13Leu","LOC663227",663227,null,"663227 [Gene Symbol: LOC663227] [Locus Tag: TcasGA2_TC008478] [Chromosome: LG4] [Map Location: ] [Description: 28S ribosomal protein S27, mitochondrial] [Gene Type: protein-coding]","LOC663227; TcasGA2_TC008478"]
[579,"NC_007419.2","11190395..11190396","MNV","AG","CA","Homozygous",21,21,100,1,6,21,0.22,36.93,27,27,17,15,null,1,1,"no","CA/CA","No",1,200,"XP_974377.1:c.44_45delAGinsCA","XP_974377.1:p.Lys15Thr","LOC663227",663227,null,"663227 [Gene Symbol: LOC663227] [Locus Tag: TcasGA2_TC008478] [Chromosome: LG4] [Map Location: ] [Description: 28S ribosomal protein S27, mitochondrial] [Gene Type: protein-coding]","LOC663227; TcasGA2_TC008478"]
[580,"NC_007419.2",11307339,"SNV","C","T","Homozygous",17,20,85,0.55,12,8,0.4,37.18,20,23,11,9,null,0.85,1,"no","T/T","No",1,3.45,"XP_015834710.1:c.[1066G>A]; XP_015834708.1:c.[1066-22715G>A]; XP_015834711.1:c.[1066G>A]; XP_015834709.1:c.[1066-22715G>A]","XP_015834710.1:p.[Ala356Thr]; XP_015834711.1:p.[Ala356Thr]","LOC663398, LOC103312871","663398 , 103312871",null,"663398 [Gene Symbol: LOC663398] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: transient receptor potential-gamma protein] [Gene Type: protein-coding] || 103312871 [Gene Symbol: LOC103312871] [Locus Tag: TcasGA2_TC032905] [Chromosome: LG4] [Map Location: ] [Description: sphingomyelin phosphodiesterase-like] [Gene Type: protein-coding]","TRPL; LOC663398 || TcasGA2_TC032905; LOC103312871"]
[581,"NC_007419.2",11360726,"SNV","T","C","Heterozygous",16,22,72.73,1,4,12,0.25,39,16,22,9,8,0.81,0.74,0.95,"no","C/T","No",1,27.94,"XP_015834713.1:c.755T>C","XP_015834713.1:p.Leu252Pro","LOC107397784",107397784,null,"107397784 [Gene Symbol: LOC107397784] [Locus Tag: TcasGA2_TC008482] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397784] [Gene Type: protein-coding]","TcasGA2_TC008482; LOC107397784"]
[582,"NC_007419.2",11404036,"SNV","G","A","Heterozygous",6,20,30,1,4,5,0.44,37.33,9,23,5,4,-0.62,0.99,1,"no","A/G","No",1,33.68,"NP_001073624.1:c.[250G>A]; XP_008192741.1:c.[250G>A]","NP_001073624.1:p.[Asp84Asn]; XP_008192741.1:p.[Asp84Asn]","Stip",663492,"Sip1/TFIP11 interacting protein","663492 [Gene Symbol: Stip] [Locus Tag: TcasGA2_TC008486] [Chromosome: LG4] [Map Location: ] [Description: Sip1/TFIP11 interacting protein] [Gene Type: protein-coding]","Stip; TcasGA2_TC008486"]
[583,"NC_007419.2",11515892,"SNV","G","A","Homozygous",20,21,95.24,1,16,10,0.38,37.75,26,27,12,13,null,1,1,"no","A/A","No",1,53.18,"XP_015834342.1:c.47C>T","XP_015834342.1:p.Ser16Phe","LOC103312883",103312883,null,"103312883 [Gene Symbol: LOC103312883] [Locus Tag: TcasGA2_TC007022] [Chromosome: LG4] [Map Location: ] [Description: piggyBac transposable element-derived protein 4] [Gene Type: protein-coding]","LOC103312883; TcasGA2_TC007022"]
[584,"NC_007419.2",11557552,"SNV","T","C","Heterozygous",30,45,66.67,1,20,10,0.33,37.8,30,45,14,22,0.61,0.55,0.54,"no","C/T","No",1,78.41,"XP_015835130.1:c.701T>C","XP_015835130.1:p.Val234Ala","LOC107397869",107397869,null,"107397869 [Gene Symbol: LOC107397869] [Locus Tag: TcasGA2_TC032951] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397869] [Gene Type: protein-coding]","LOC107397869; TcasGA2_TC032951"]
[585,"NC_007419.2",11564192,"SNV","G","A","Heterozygous",6,24,25,0.99,6,0,0,37.83,6,24,3,5,1.3,0.95,1,"no","A/G","No",1,22.57,"XP_015835131.1:c.565G>A","XP_015835131.1:p.Val189Ile","LOC107397870",107397870,null,"107397870 [Gene Symbol: LOC107397870] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397870] [Gene Type: protein-coding]","LOC107397870"]
[586,"NC_007419.2",11564200,"Deletion","A","-","Homozygous",22,22,100,1,22,0,0,35.32,22,22,12,14,null,1,1,"no","-/-","No",1,96.73,"XP_015835131.1:c.573delA","XP_015835131.1:p.Asn193fs","LOC107397870",107397870,null,"107397870 [Gene Symbol: LOC107397870] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397870] [Gene Type: protein-coding]","LOC107397870"]
[587,"NC_007419.2",11564210,"SNV","C","T","Heterozygous",6,23,26.09,1,5,1,0.17,33.67,6,24,5,6,-1.4,0.35,0.9,"no","C/T","No",1,25.23,"XP_015835131.1:c.583C>T","XP_015835131.1:p.Arg195Cys","LOC107397870",107397870,null,"107397870 [Gene Symbol: LOC107397870] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397870] [Gene Type: protein-coding]","LOC107397870"]
[588,"NC_007419.2",11564327,"SNV","A","G","Heterozygous",29,49,59.18,1,15,14,0.48,36.83,29,53,16,16,1.1,0.3,0.89,"no","A/G","No",1,130.78,"XP_015835131.1:c.700A>G","XP_015835131.1:p.Thr234Ala","LOC107397870",107397870,null,"107397870 [Gene Symbol: LOC107397870] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397870] [Gene Type: protein-coding]","LOC107397870"]
[589,"NC_007419.2",11564336,"SNV","A","G","Homozygous",35,43,81.4,0.76,17,22,0.44,37.51,39,47,22,21,-0.11,0.9,0.96,"no","G/G","No",1,6.23,"XP_015835131.1:c.709A>G","XP_015835131.1:p.Ser237Gly","LOC107397870",107397870,null,"107397870 [Gene Symbol: LOC107397870] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397870] [Gene Type: protein-coding]","LOC107397870"]
[590,"NC_007419.2",11564379,"SNV","T","C","Heterozygous",25,37,67.57,1,16,9,0.36,38.16,25,37,16,19,0.1,0.92,0.92,"no","C/T","No",1,62.54,"XP_015835131.1:c.752T>C","XP_015835131.1:p.Val251Ala","LOC107397870",107397870,null,"107397870 [Gene Symbol: LOC107397870] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397870] [Gene Type: protein-coding]","LOC107397870"]
[591,"NC_007419.2",12159348,"SNV","T","C","Homozygous",20,20,100,1,10,11,0.48,37.4,21,21,11,14,null,1,1,"no","C/C","No",1,80.11,"XP_008192461.1:c.650A>G","XP_008192461.1:p.Asn217Ser","LOC103312771",103312771,null,"103312771 [Gene Symbol: LOC103312771] [Locus Tag: TcasGA2_TC007004] [Chromosome: LG4] [Map Location: ] [Description: TNF receptor-associated factor family protein DDB_G0272829] [Gene Type: protein-coding]","LOC103312771; TcasGA2_TC007004"]
[592,"NC_007420.3",489104,"Deletion","C","-","Homozygous",20,20,100,1,6,15,0.29,34.65,21,21,8,10,null,1,1,"no","-/-","No",1,90.71,"XP_008192910.2:c.225delG","XP_008192910.2:p.His76fs","LOC658423",658423,null,"658423 [Gene Symbol: LOC658423] [Locus Tag: TcasGA2_TC013905] [Chromosome: LG5] [Map Location: ] [Description: dnaJ protein homolog 1] [Gene Type: protein-coding]","LOC658423; TcasGA2_TC013905"]
[593,"NC_007420.3",946142,"SNV","G","T","Homozygous",24,24,100,1,20,10,0.33,36.42,30,30,13,12,null,1,1,"no","T/T","No",1,93.74,"XP_015835162.1:c.[83+5125G>T]; XP_015835161.1:c.[1212G>T]","XP_015835161.1:p.Glu404Asp","LOC100142057",100142057,null,"100142057 [Gene Symbol: LOC100142057] [Locus Tag: TcasGA2_TC016312] [Chromosome: LG5] [Map Location: ] [Description: stress response protein NST1] [Gene Type: protein-coding]","LOC100142057; TcasGA2_TC016312"]
[594,"NC_007420.3",1482009,"SNV","C","T","Homozygous",21,21,100,1,15,12,0.44,37.81,27,27,14,14,null,1,1,"no","T/T","No",1,84.7,"XP_001809514.1:c.380G>A","XP_001809514.1:p.Ser127Asn","LOC100141705",100141705,null,"100141705 [Gene Symbol: LOC100141705] [Locus Tag: TcasGA2_TC010910] [Chromosome: LG5] [Map Location: ] [Description: brachyurin] [Gene Type: protein-coding]","LOC100141705; TcasGA2_TC010910; H108"]
[595,"NC_007420.3",1646255,"SNV","G","C","Heterozygous",17,25,68,1,14,3,0.18,40.12,17,25,11,10,1.14,0.79,0.96,"no","C/G","No",1,44.99,"XP_001810629.1:c.272G>C","XP_001810629.1:p.Ser91Thr","LOC100142203",100142203,null,"100142203 [Gene Symbol: LOC100142203] [Locus Tag: TcasGA2_TC010945] [Chromosome: LG5] [Map Location: ] [Description: general transcription factor 3C polypeptide 5] [Gene Type: protein-coding]","TcasGA2_TC010945; LOC100142203"]
[596,"NC_007420.3",1804614,"SNV","T","A","Homozygous",20,20,100,1,16,7,0.3,36.55,23,23,10,12,null,1,1,"no","A/A","No",1,81.69,"XP_008199328.1:c.[896-2854A>T]; XP_015835564.1:c.[57T>A]","XP_015835564.1:p.Asn19Lys","LOC100271908, LOC107397944","100271908 , 107397944",null,"100271908 [Gene Symbol: LOC100271908] [Locus Tag: TcasGA2_TC010897] [Chromosome: LG5] [Map Location: ] [Description: vestigial] [Gene Type: protein-coding] || 107397944 [Gene Symbol: LOC107397944] [Locus Tag: TcasGA2_TC010949] [Chromosome: LG5] [Map Location: ] [Description: kinesin-like protein KIF23] [Gene Type: protein-coding]","TcasGA2_TC010897; LOC100271908; Vg || LOC107397944; TcasGA2_TC010949"]
[597,"NC_007420.3",1804618,"SNV","C","T","Heterozygous",11,21,52.38,1,7,6,0.46,37.45,13,27,5,8,1.97,0.26,1,"no","C/T","No",1,82.62,"XP_008199328.1:c.[896-2858G>A]; XP_015835564.1:c.[61C>T]","XP_015835564.1:p.Pro21Ser","LOC100271908, LOC107397944","100271908 , 107397944",null,"100271908 [Gene Symbol: LOC100271908] [Locus Tag: TcasGA2_TC010897] [Chromosome: LG5] [Map Location: ] [Description: vestigial] [Gene Type: protein-coding] || 107397944 [Gene Symbol: LOC107397944] [Locus Tag: TcasGA2_TC010949] [Chromosome: LG5] [Map Location: ] [Description: kinesin-like protein KIF23] [Gene Type: protein-coding]","TcasGA2_TC010897; LOC100271908; Vg || LOC107397944; TcasGA2_TC010949"]
[598,"NC_007420.3",1908606,"SNV","G","C","Heterozygous",9,25,36,1,3,7,0.3,38.11,10,30,4,5,-1.7,0.06,1,"no","C/G","No",1,57.72,"XP_970755.2:c.2684G>C","XP_970755.2:p.Ser895Thr","LOC659345",659345,null,"659345 [Gene Symbol: LOC659345] [Locus Tag: TcasGA2_TC010952] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC659345] [Gene Type: protein-coding]","TcasGA2_TC010952; LOC659345"]
[599,"NC_007420.3",2227074,"SNV","C","T","Homozygous",18,20,90,0.99,11,11,0.5,37.78,22,24,11,14,null,0.98,1,"no","T/T","No",1,19.37,"XP_015835443.1:c.2080G>A","XP_015835443.1:p.Val694Ile","LOC654869",654869,null,"654869 [Gene Symbol: LOC654869] [Locus Tag: TcasGA2_TC013915] [Chromosome: LG5] [Map Location: ] [Description: diacylglycerol kinase eta] [Gene Type: protein-coding]","TcasGA2_TC013915; LOC654869"]
[600,"NC_007420.3",2545905,"SNV","G","A","Heterozygous",12,24,50,1,2,10,0.17,34.25,12,24,4,5,-1.65,0.09,0.35,"no","A/G","No",1,96.48,"XP_967820.1:c.1763G>A","XP_967820.1:p.Ser588Asn","LOC656183",656183,null,"656183 [Gene Symbol: LOC656183] [Locus Tag: TcasGA2_TC013927] [Chromosome: LG5] [Map Location: ] [Description: replication factor C subunit 1] [Gene Type: protein-coding]","LOC656183; TcasGA2_TC013927"]
[601,"NC_007420.3","2570997..2570998","MNV","TC","AT","Heterozygous",11,20,55,1,9,7,0.44,37.36,16,25,9,11,null,0.24,0.9,"no","complex","No",1,200,"XP_015835259.1:c.[369_370delGAinsAT]; XP_015835258.1:c.[369_370delGAinsAT]","XP_015835259.1:p.[Ser124Cys]; XP_015835258.1:p.[Ser124Cys]","LOC103312894",103312894,null,"103312894 [Gene Symbol: LOC103312894] [Locus Tag: TcasGA2_TC013877] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312894] [Gene Type: protein-coding]","LOC103312894; TcasGA2_TC013877"]
[602,"NC_007420.3",2625682,"SNV","C","T","Heterozygous",12,27,44.44,1,10,2,0.17,38.5,12,27,6,10,-0.71,0.92,1,"no","C/T","No",1,90.33,"XP_969328.1:c.607G>A","XP_969328.1:p.Asp203Asn","LOC657800",657800,null,"657800 [Gene Symbol: LOC657800] [Locus Tag: TcasGA2_TC013872] [Chromosome: LG5] [Map Location: ] [Description: vacuolar protein sorting-associated protein 37A] [Gene Type: protein-coding]","TcasGA2_TC013872; LOC657800"]
[603,"NC_007420.3",2645349,"SNV","G","T","Heterozygous",15,23,65.22,1,10,11,0.48,37.93,21,30,5,9,1.1,0.78,1,"no","G/T","No",1,51.25,"XP_008192953.1:c.3957G>T","XP_008192953.1:p.Leu1319Phe","LOC658038",658038,null,"658038 [Gene Symbol: LOC658038] [Locus Tag: TcasGA2_TC013942] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 7] [Gene Type: protein-coding]","LOC658038; TcasGA2_TC013942"]
[604,"NC_007420.3",2684199,"SNV","A","C","Heterozygous",15,22,68.18,1,3,12,0.2,38.27,15,22,4,10,-0.85,0.95,1,"no","A/C","No",1,37.04,"XP_008192937.1:c.27T>G","XP_008192937.1:p.Asp9Glu","LOC658579",658579,null,"658579 [Gene Symbol: LOC658579] [Locus Tag: TcasGA2_TC013866] [Chromosome: LG5] [Map Location: ] [Description: transient receptor potential cation channel, subfamily C-like protein] [Gene Type: protein-coding]","LOC658579; GLEAN_13866; TcasGA2_TC013866"]
[605,"NC_007420.3",3139883,"SNV","T","C","Homozygous",23,23,100,1,15,11,0.42,37.04,26,26,14,17,null,1,1,"no","C/C","No",1,89.13,"XP_015835566.1:c.[218A>G]; XP_015835565.1:c.[19+12480T>C]; XP_001810887.1:c.[424+44503T>C]","XP_015835566.1:p.Asn73Ser","LOC659852, LOC107397945","659852 , 107397945",null,"659852 [Gene Symbol: LOC659852] [Locus Tag: TcasGA2_TC013958] [Chromosome: LG5] [Map Location: ] [Description: neuroligin 3] [Gene Type: protein-coding] || 107397945 [Gene Symbol: LOC107397945] [Locus Tag: TcasGA2_TC013846] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC107397945] [Gene Type: protein-coding]","NLG-3; LOC659852; TcasGA2_TC013958 || TcasGA2_TC013846; LOC107397945"]
[606,"NC_007420.3",3311443,"SNV","T","G","Homozygous",21,21,100,1,10,15,0.4,39.29,25,25,8,13,null,1,1,"no","G/G","No",1,83.1,"XP_008192973.1:c.2291T>G","XP_008192973.1:p.Val764Gly","LOC103312902",103312902,null,"103312902 [Gene Symbol: LOC103312902] [Locus Tag: TcasGA2_TC013973] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312902] [Gene Type: protein-coding]","LOC103312902; TcasGA2_TC013973"]
[607,"NC_007420.3",3601454,"SNV","G","A","Homozygous",23,23,100,1,9,21,0.3,37.74,30,30,11,14,null,1,1,"no","A/A","No",1,90.71,"XP_015835221.1:c.172C>T","XP_015835221.1:p.Pro58Ser","LOC656096",656096,null,"656096 [Gene Symbol: LOC656096] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC656096] [Gene Type: protein-coding]","LOC656096"]
[608,"NC_007420.3",3601474,"SNV","A","G","Homozygous",22,23,95.65,1,9,21,0.3,38.68,30,32,10,12,null,1,1,"no","G/G","No",1,57.82,"XP_015835221.1:c.152T>C","XP_015835221.1:p.Val51Ala","LOC656096",656096,null,"656096 [Gene Symbol: LOC656096] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC656096] [Gene Type: protein-coding]","LOC656096"]
[609,"NC_007420.3",3612667,"SNV","A","G","Homozygous",20,20,100,1,10,14,0.42,36.65,24,24,10,11,null,1,1,"no","G/G","No",1,80.09,"XP_008193006.2:c.[142A>G]; XP_001809825.2:c.[560-2825T>C]","XP_008193006.2:p.Ile48Val","LOC100141875, LOC656347","100141875 , 656347",null,"100141875 [Gene Symbol: LOC100141875] [Locus Tag: TcasGA2_TC013816] [Chromosome: LG5] [Map Location: ] [Description: cuticle protein] [Gene Type: protein-coding] || 656347 [Gene Symbol: LOC656347] [Locus Tag: TcasGA2_TC013990] [Chromosome: LG5] [Map Location: ] [Description: cuticle protein 7] [Gene Type: protein-coding]","TcasGA2_TC013816; LOC100141875 || Cuti-4; TcasGA2_TC013990; LOC656347"]
[610,"NC_007420.3",3725059,"SNV","G","C","Heterozygous",12,22,54.55,1,11,4,0.27,36.67,15,27,6,7,-1.48,0.35,0.82,"no","C/G","No",1,78.92,"XP_008193014.1:c.711G>C","XP_008193014.1:p.Leu237Phe","LOC657332",657332,null,"657332 [Gene Symbol: LOC657332] [Locus Tag: TcasGA2_TC013994] [Chromosome: LG5] [Map Location: ] [Description: alpha-1,3/1,6-mannosyltransferase ALG2] [Gene Type: protein-coding]","TcasGA2_TC013994; LOC657332"]
[611,"NC_007420.3",3725272,"SNV","G","A","Heterozygous",12,23,52.17,1,6,6,0.5,36.33,12,23,6,7,-2.37,0.67,0.83,"no","A/G","No",1,89.71,"XP_008193014.1:c.924G>A","XP_008193014.1:p.Met308Ile","LOC657332",657332,null,"657332 [Gene Symbol: LOC657332] [Locus Tag: TcasGA2_TC013994] [Chromosome: LG5] [Map Location: ] [Description: alpha-1,3/1,6-mannosyltransferase ALG2] [Gene Type: protein-coding]","TcasGA2_TC013994; LOC657332"]
[612,"NC_007420.3",3725357,"SNV","C","A","Heterozygous",10,26,38.46,1,6,4,0.4,37,10,27,4,10,-0.24,0.21,1,"no","A/C","No",1,64.21,"XP_008193014.1:c.1009C>A","XP_008193014.1:p.Leu337Ile","LOC657332",657332,null,"657332 [Gene Symbol: LOC657332] [Locus Tag: TcasGA2_TC013994] [Chromosome: LG5] [Map Location: ] [Description: alpha-1,3/1,6-mannosyltransferase ALG2] [Gene Type: protein-coding]","TcasGA2_TC013994; LOC657332"]
[613,"NC_007420.3",3729743,"SNV","G","A","Heterozygous",9,26,34.62,1,7,4,0.36,36,11,30,5,7,-1.75,0.33,0.24,"no","A/G","No",1,55.25,"XP_969040.2:c.1180G>A","XP_969040.2:p.Val394Met","LOC657490",657490,null,"657490 [Gene Symbol: LOC657490] [Locus Tag: TcasGA2_TC013995] [Chromosome: LG5] [Map Location: ] [Description: E3 ubiquitin-protein ligase parkin] [Gene Type: protein-coding]","TcasGA2_TC013995; LOC657490"]
[614,"NC_007420.3",3880872,"SNV","T","G","Homozygous",24,24,100,1,16,10,0.38,38.29,26,26,10,14,null,1,1,"no","G/G","No",1,92.13,"XP_015835500.1:c.[2825A>C]; XP_008193024.1:c.[2825A>C]; XP_015835499.1:c.[2825A>C]; XP_015835502.1:c.[2753A>C]","XP_015835500.1:p.[Asn942Thr]; XP_008193024.1:p.[Asn942Thr]; XP_015835499.1:p.[Asn942Thr]; XP_015835502.1:p.[Asn918Thr]","LOC103312925",103312925,null,"103312925 [Gene Symbol: LOC103312925] [Locus Tag: TcasGA2_TC013796] [Chromosome: LG5] [Map Location: ] [Description: DNA N6-methyl adenine demethylase] [Gene Type: protein-coding]","LOC103312925; TcasGA2_TC013796"]
[615,"NC_007420.3",4023087,"SNV","G","A","Homozygous",18,20,90,0.99,11,10,0.48,36.61,21,23,9,10,null,0.96,1,"no","A/A","No",1,18.26,"XP_970660.2:c.166C>T","XP_970660.2:p.Pro56Ser","LOC659242",659242,null,"659242 [Gene Symbol: LOC659242] [Locus Tag: TcasGA2_TC013791] [Chromosome: LG5] [Map Location: ] [Description: peroxiredoxin-6] [Gene Type: protein-coding]","LOC659242; TcasGA2_TC013791"]
[616,"NC_007420.3",4023090,"SNV","A","G","Homozygous",18,20,90,1,11,10,0.48,36,21,23,9,10,null,0.99,1,"no","G/G","No",1,23.82,"XP_970660.2:c.163T>C","XP_970660.2:p.Tyr55His","LOC659242",659242,null,"659242 [Gene Symbol: LOC659242] [Locus Tag: TcasGA2_TC013791] [Chromosome: LG5] [Map Location: ] [Description: peroxiredoxin-6] [Gene Type: protein-coding]","LOC659242; TcasGA2_TC013791"]
[617,"NC_007420.3","4030375..4030376","MNV","CG","GT","Homozygous",28,28,100,1,14,23,0.38,38.37,37,37,16,21,null,1,1,"no","GT/GT","No",1,200,"XP_970910.1:c.26_27delCGinsAC","XP_970910.1:p.Thr9Asn","LOC659517",659517,null,"659517 [Gene Symbol: LOC659517] [Locus Tag: TcasGA2_TC013789] [Chromosome: LG5] [Map Location: ] [Description: N-terminal Xaa-Pro-Lys N-methyltransferase 1] [Gene Type: protein-coding]","LOC659517; TcasGA2_TC013789"]
[618,"NC_007420.3",4234878,"SNV","G","A","Homozygous",23,23,100,1,16,9,0.36,37.65,25,25,13,16,null,1,1,"no","A/A","No",1,90.71,"XP_015835355.1:c.[1442G>A]; XP_008193050.1:c.[1442G>A]","XP_015835355.1:p.[Arg481Gln]; XP_008193050.1:p.[Arg481Gln]","LOC103312928",103312928,null,"103312928 [Gene Symbol: LOC103312928] [Locus Tag: TcasGA2_TC014016] [Chromosome: LG5] [Map Location: ] [Description: antigen KI-67] [Gene Type: protein-coding]","LOC103312928; TcasGA2_TC014016"]
[619,"NC_007420.3",4246790,"SNV","T","C","Heterozygous",9,23,39.13,1,3,7,0.3,39.44,10,27,5,6,1.54,0.23,0.76,"no","C/T","No",1,64.63,"XP_008193052.1:c.842T>C","XP_008193052.1:p.Val281Ala","LOC660537",660537,null,"660537 [Gene Symbol: LOC660537] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: protein 60A-like] [Gene Type: protein-coding]","LOC660537"]
[620,"NC_007420.3",4247022,"SNV","C","A","Heterozygous",7,22,31.82,1,4,3,0.43,39.29,7,23,4,6,-0.49,0.84,0.91,"no","A/C","No",1,37.06,"XP_008193052.1:c.1021C>A","XP_008193052.1:p.Leu341Ile","LOC660537",660537,null,"660537 [Gene Symbol: LOC660537] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: protein 60A-like] [Gene Type: protein-coding]","LOC660537"]
[621,"NC_007420.3",4247061,"SNV","T","G","Heterozygous",6,22,27.27,1,6,1,0.14,38.5,7,28,4,5,1.25,0.78,0.58,"no","G/T","No",1,28.47,"XP_008193052.1:c.1060T>G","XP_008193052.1:p.Phe354Val","LOC660537",660537,null,"660537 [Gene Symbol: LOC660537] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: protein 60A-like] [Gene Type: protein-coding]","LOC660537"]
[622,"NC_007420.3",4426802,"SNV","C","T","Homozygous",21,21,100,1,17,6,0.26,38.38,23,23,13,18,null,1,1,"no","T/T","No",1,84.7,"XP_008193067.1:c.110C>T","XP_008193067.1:p.Thr37Ile","LOC103312930",103312930,null,"103312930 [Gene Symbol: LOC103312930] [Locus Tag: TcasGA2_TC014025] [Chromosome: LG5] [Map Location: ] [Description: toll-like receptor 3] [Gene Type: protein-coding]","LOC103312930; TcasGA2_TC014025"]
[623,"NC_007420.3",4461410,"SNV","T","A","Homozygous",21,21,100,1,14,13,0.48,37.14,27,27,15,14,null,1,1,"no","A/A","No",1,84.7,"XP_972577.1:c.785A>T","XP_972577.1:p.Lys262Met","LOC661320",661320,null,"661320 [Gene Symbol: LOC661320] [Locus Tag: TcasGA2_TC013773] [Chromosome: LG5] [Map Location: ] [Description: cytochrome P450-like protein] [Gene Type: protein-coding]","TcasGA2_TC013773; LOC661320"]
[624,"NC_007420.3",4481171,"SNV","C","G","Homozygous",27,27,100,1,23,9,0.28,36.52,32,32,23,20,null,1,1,"no","G/G","No",1,101.14,"XP_015835422.1:c.[106G>C]; XP_015835421.1:c.[106G>C]","XP_015835422.1:p.[Glu36Gln]; XP_015835421.1:p.[Glu36Gln]","LOC103312914",103312914,null,"103312914 [Gene Symbol: LOC103312914] [Locus Tag: TcasGA2_TC013771] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312914] [Gene Type: protein-coding]","Or334; LOC103312914; TcasGA2_TC013771"]
[625,"NC_007420.3",4481179,"SNV","A","G","Homozygous",30,30,100,1,22,12,0.35,36.63,34,34,25,22,null,1,1,"no","G/G","No",1,110.18,"XP_015835421.1:c.[98T>C]; XP_015835422.1:c.[98T>C]","XP_015835421.1:p.[Ile33Thr]; XP_015835422.1:p.[Ile33Thr]","LOC103312914",103312914,null,"103312914 [Gene Symbol: LOC103312914] [Locus Tag: TcasGA2_TC013771] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312914] [Gene Type: protein-coding]","Or334; LOC103312914; TcasGA2_TC013771"]
[626,"NC_007420.3",4481249,"SNV","C","T","Heterozygous",8,29,27.59,1,4,4,0.5,40,8,32,6,8,-0.02,0.84,0.83,"no","C/T","No",1,33.82,"XP_015835422.1:c.[28G>A]; XP_015835421.1:c.[28G>A]","XP_015835422.1:p.[Asp10Asn]; XP_015835421.1:p.[Asp10Asn]","LOC103312914",103312914,null,"103312914 [Gene Symbol: LOC103312914] [Locus Tag: TcasGA2_TC013771] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312914] [Gene Type: protein-coding]","Or334; LOC103312914; TcasGA2_TC013771"]
[627,"NC_007420.3",4483865,"SNV","C","T","Homozygous",23,23,100,1,12,12,0.5,38.35,24,24,14,16,null,1,1,"no","T/T","No",1,90.72,"XP_972668.2:c.422G>A","XP_972668.2:p.Arg141Lys","LOC103312914, LOC661418","103312914 , 661418",null,"103312914 [Gene Symbol: LOC103312914] [Locus Tag: TcasGA2_TC013771] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312914] [Gene Type: protein-coding] || 661418 [Gene Symbol: LOC661418] [Locus Tag: TcasGA2_TC013770] [Chromosome: LG5] [Map Location: ] [Description: beta-1,3-galactosyltransferase brn] [Gene Type: protein-coding]","Or334; LOC103312914; TcasGA2_TC013771 || LOC661418; TcasGA2_TC013770"]
[628,"NC_007420.3",4483880,"SNV","G","A","Homozygous",20,20,100,1,10,11,0.48,38.75,21,21,12,13,null,1,1,"no","A/A","No",1,81.69,"XP_972668.2:c.407C>T","XP_972668.2:p.Ser136Leu","LOC103312914, LOC661418","103312914 , 661418",null,"103312914 [Gene Symbol: LOC103312914] [Locus Tag: TcasGA2_TC013771] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312914] [Gene Type: protein-coding] || 661418 [Gene Symbol: LOC661418] [Locus Tag: TcasGA2_TC013770] [Chromosome: LG5] [Map Location: ] [Description: beta-1,3-galactosyltransferase brn] [Gene Type: protein-coding]","Or334; LOC103312914; TcasGA2_TC013771 || LOC661418; TcasGA2_TC013770"]
[629,"NC_007420.3",4618125,"SNV","A","G","Homozygous",22,22,100,1,4,18,0.18,37.41,22,22,11,14,null,1,1,"no","G/G","No",1,86.11,"XP_973105.1:c.310A>G","XP_973105.1:p.Ile104Val","LOC661880",661880,null,"661880 [Gene Symbol: LOC661880] [Locus Tag: TcasGA2_TC014037] [Chromosome: LG5] [Map Location: ] [Description: signal transducing adapter molecule 2] [Gene Type: protein-coding]","LOC661880; TcasGA2_TC014037"]
[630,"NC_007420.3",4678406,"SNV","C","T","Homozygous",21,21,100,1,11,13,0.46,36.71,24,24,10,14,null,1,1,"no","T/T","No",1,84.71,"XP_973328.1:c.[1042C>T]; XP_015835420.1:c.[676C>T]; XP_015835418.1:c.[1054C>T]; XP_015835419.1:c.[1048C>T]; XP_008193094.1:c.[1036C>T]","XP_973328.1:p.[Leu348Phe]; XP_015835420.1:p.[Leu226Phe]; XP_015835418.1:p.[Leu352Phe]; XP_015835419.1:p.[Leu350Phe]; XP_008193094.1:p.[Leu346Phe]","LOC662118",662118,null,"662118 [Gene Symbol: LOC662118] [Locus Tag: TcasGA2_TC014040] [Chromosome: LG5] [Map Location: ] [Description: calcium uptake protein 1 homolog, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC014040; LOC662118"]
[631,"NC_007420.3",4951429,"SNV","C","T","Homozygous",24,24,100,1,8,22,0.27,36.17,30,30,11,12,null,1,1,"no","T/T","No",1,93.74,"XP_008193134.1:c.6085G>A","XP_008193134.1:p.Gly2029Ser","LOC662874",662874,null,"662874 [Gene Symbol: LOC662874] [Locus Tag: TcasGA2_TC013742] [Chromosome: LG5] [Map Location: ] [Description: myosin 7B] [Gene Type: protein-coding]","Myo7B; LOC662874; TcasGA2_TC013742"]
[632,"NC_007420.3",4964139,"SNV","G","C","Homozygous",21,21,100,1,11,10,0.48,37.52,21,21,13,16,null,1,1,"no","C/C","No",1,83.13,"XP_008193135.1:c.2152C>G","XP_008193135.1:p.His718Asp","LOC662902",662902,null,"662902 [Gene Symbol: LOC662902] [Locus Tag: TcasGA2_TC013741] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC662902] [Gene Type: protein-coding]","LOC662902; TcasGA2_TC013741"]
[633,"NC_007420.3",5093370,"SNV","T","C","Heterozygous",5,20,25,0.99,1,4,0.2,39.2,5,22,3,3,1.48,0.18,0.48,"no","C/T","No",1,21.96,"XP_008193001.1:c.677A>G","XP_008193001.1:p.Lys226Arg","LOC103312916",103312916,null,"103312916 [Gene Symbol: LOC103312916] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: adhesion G-protein coupled receptor G2-like] [Gene Type: protein-coding]","LOC103312916"]
[634,"NC_007420.3",5093374,"SNV","C","T","Heterozygous",5,20,25,0.99,1,4,0.2,40,5,22,3,3,2.18,0.18,0.48,"no","C/T","No",1,20.75,"XP_008193001.1:c.673G>A","XP_008193001.1:p.Ala225Thr","LOC103312916",103312916,null,"103312916 [Gene Symbol: LOC103312916] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: adhesion G-protein coupled receptor G2-like] [Gene Type: protein-coding]","LOC103312916"]
[635,"NC_007420.3","5181857..5181859","Deletion","CAA","-","Heterozygous",9,22,40.91,1,6,3,0.33,35.11,9,24,4,7,null,0.48,0.71,"no","complex","No",1,200,"XP_008193147.1:c.871_873delCAA","XP_008193147.1:p.Gln294del","LOC663351",663351,null,"663351 [Gene Symbol: LOC663351] [Locus Tag: TcasGA2_TC014065] [Chromosome: LG5] [Map Location: ] [Description: transcription factor Sox-3] [Gene Type: protein-coding]","LOC663351; SoxN; TcasGA2_TC014065; SoxNeuro"]
[636,"NC_007420.3",5381092,"SNV","T","A","Homozygous",21,22,95.45,1,7,15,0.32,38.67,22,23,11,13,null,1,1,"no","A/A","No",1,58.42,"XP_966549.1:c.1932T>A","XP_966549.1:p.Asp644Glu","LOC654987",654987,null,"654987 [Gene Symbol: LOC654987] [Locus Tag: TcasGA2_TC014075] [Chromosome: LG5] [Map Location: ] [Description: DNA-directed RNA polymerase III subunit RPC2] [Gene Type: protein-coding]","TcasGA2_TC014075; LOC654987"]
[637,"NC_007420.3","5429198..5429199","MNV","AC","GT","Heterozygous",13,23,56.52,1,7,9,0.44,37.81,16,26,11,14,1.94,0.85,1,"no","complex","No",1,200,"XP_015835278.1:c.[5272_5273delGTinsAC]; XP_015835280.1:c.[1437-4571_1437-4570delGTinsAC]; XP_008193174.2:c.[1556-4571_1556-4570delGTinsAC]","XP_015835278.1:p.Val1758Thr","LOC655359, LOC107397896","655359 , 107397896",null,"655359 [Gene Symbol: LOC655359] [Locus Tag: TcasGA2_TC013716] [Chromosome: LG5] [Map Location: ] [Description: FERM, RhoGEF and pleckstrin domain-containing protein 1] [Gene Type: protein-coding] || 107397896 [Gene Symbol: LOC107397896] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","TcasGA2_TC013716; LOC655359 || LOC107397896"]
[638,"NC_007420.3",5431224,"SNV","G","C","Homozygous",21,21,100,1,6,17,0.26,37.05,23,23,11,12,null,1,1,"no","C/C","No",1,83.12,"XP_008193174.2:c.[1555+3276C>G]; XP_015835280.1:c.[1436+3276C>G]; XP_015835278.1:c.[3247C>G]","XP_015835278.1:p.Leu1083Val","LOC655359, LOC107397896","655359 , 107397896",null,"655359 [Gene Symbol: LOC655359] [Locus Tag: TcasGA2_TC013716] [Chromosome: LG5] [Map Location: ] [Description: FERM, RhoGEF and pleckstrin domain-containing protein 1] [Gene Type: protein-coding] || 107397896 [Gene Symbol: LOC107397896] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","TcasGA2_TC013716; LOC655359 || LOC107397896"]
[639,"NC_007420.3",5463885,"SNV","A","T","Homozygous",21,21,100,1,10,12,0.45,37.29,22,22,16,18,null,1,1,"no","T/T","No",1,84.7,"XP_967422.1:c.2032T>A","XP_967422.1:p.Ser678Thr","LOC655767",655767,null,"655767 [Gene Symbol: LOC655767] [Locus Tag: TcasGA2_TC013713] [Chromosome: LG5] [Map Location: ] [Description: DNA replication licensing factor Mcm7] [Gene Type: protein-coding]","LOC655767; TcasGA2_TC013713"]
[640,"NC_007420.3",5463970,"SNV","T","A","Homozygous",21,21,100,1,14,8,0.36,38.1,22,22,14,15,null,1,1,"no","A/A","No",1,84.7,"XP_967422.1:c.1947A>T","XP_967422.1:p.Glu649Asp","LOC655767",655767,null,"655767 [Gene Symbol: LOC655767] [Locus Tag: TcasGA2_TC013713] [Chromosome: LG5] [Map Location: ] [Description: DNA replication licensing factor Mcm7] [Gene Type: protein-coding]","LOC655767; TcasGA2_TC013713"]
[641,"NC_007420.3",5564233,"SNV","A","C","Heterozygous",16,23,69.57,1,15,1,0.06,35.94,16,24,8,12,-1.67,0.72,0.72,"no","A/C","No",1,34.24,"XP_015835528.1:c.[655A>C]; XP_008193184.1:c.[949A>C]","XP_015835528.1:p.[Ile219Leu]; XP_008193184.1:p.[Ile317Leu]","LOC657102",657102,null,"657102 [Gene Symbol: LOC657102] [Locus Tag: TcasGA2_TC014091] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC657102; TcasGA2_TC014091"]
[642,"NC_007420.3",5575327,"SNV","G","C","Homozygous",20,20,100,1,16,12,0.43,36.9,28,28,12,13,null,1,1,"no","C/C","No",1,80.11,"XP_015835557.1:c.[3873G>C]; XP_968748.1:c.[3873G>C]","XP_015835557.1:p.[Glu1291Asp]; XP_968748.1:p.[Glu1291Asp]","LOC657184",657184,null,"657184 [Gene Symbol: LOC657184] [Locus Tag: TcasGA2_TC014092] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","TcasGA2_TC014092; LOC657184"]
[643,"NC_007420.3",5665685,"SNV","A","G","Homozygous",20,20,100,1,9,15,0.38,38.65,24,24,10,11,null,1,1,"no","G/G","No",1,80.09,"XP_008193225.1:c.5282A>G","XP_008193225.1:p.Lys1761Arg","LOC100142258",100142258,null,"100142258 [Gene Symbol: LOC100142258] [Locus Tag: TcasGA2_TC014099] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC100142258] [Gene Type: protein-coding]","TcasGA2_TC014099; LOC100142258"]
[644,"NC_007420.3",5665857,"SNV","A","T","Heterozygous",15,20,75,0.99,10,7,0.41,37.07,17,22,9,14,-0.44,0.95,1,"no","A/T","No",1,20.66,"XP_008193225.1:c.5454A>T","XP_008193225.1:p.Lys1818Asn","LOC100142258",100142258,null,"100142258 [Gene Symbol: LOC100142258] [Locus Tag: TcasGA2_TC014099] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC100142258] [Gene Type: protein-coding]","TcasGA2_TC014099; LOC100142258"]
[645,"NC_007420.3",5746110,"SNV","C","A","Heterozygous",7,21,33.33,1,3,4,0.43,35.71,7,21,5,6,-2.09,0.16,0.9,"no","A/C","No",1,39.79,"XP_970378.1:c.140C>A","XP_970378.1:p.Thr47Asn","LOC658938",658938,null,"658938 [Gene Symbol: LOC658938] [Locus Tag: TcasGA2_TC014110] [Chromosome: LG5] [Map Location: ] [Description: ras-related protein Rab-18] [Gene Type: protein-coding]","TcasGA2_TC014110; LOC658938"]
[646,"NC_007420.3",5746118,"SNV","C","A","Heterozygous",7,20,35,1,3,5,0.38,39,8,21,5,6,0.95,0.1,0.89,"no","A/C","No",1,42.63,"XP_970378.1:c.148C>A","XP_970378.1:p.Leu50Ile","LOC658938",658938,null,"658938 [Gene Symbol: LOC658938] [Locus Tag: TcasGA2_TC014110] [Chromosome: LG5] [Map Location: ] [Description: ras-related protein Rab-18] [Gene Type: protein-coding]","TcasGA2_TC014110; LOC658938"]
[647,"NC_007420.3",5807229,"SNV","A","G","Heterozygous",9,21,42.86,1,5,7,0.42,39.33,12,24,8,7,1.49,0.38,0.98,"no","A/G","No",1,70.03,"XP_008193253.1:c.[959A>G]; XP_008193254.1:c.[54-11717T>C]; XP_015835510.1:c.[54-11717T>C]","XP_008193253.1:p.Glu320Gly","LOC659317, LOC103312989","659317 , 103312989",null,"659317 [Gene Symbol: LOC659317] [Locus Tag: TcasGA2_TC013697] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC659317] [Gene Type: protein-coding] || 103312989 [Gene Symbol: LOC103312989] [Locus Tag: TcasGA2_TC014116] [Chromosome: LG5] [Map Location: ] [Description: carboxypeptidase N subunit 2] [Gene Type: protein-coding]","LOC659317; TcasGA2_TC013697 || LOC103312989; TcasGA2_TC014116"]
[648,"NC_007420.3",5807384,"SNV","C","G","Heterozygous",11,21,52.38,1,2,9,0.18,37.64,11,23,5,7,-0.07,0.79,0.75,"no","C/G","No",1,81.43,"XP_008193254.1:c.[54-11872G>C]; XP_015835510.1:c.[54-11872G>C]; XP_008193253.1:c.[1114C>G]","XP_008193253.1:p.Gln372Glu","LOC659317, LOC103312989","659317 , 103312989",null,"659317 [Gene Symbol: LOC659317] [Locus Tag: TcasGA2_TC013697] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC659317] [Gene Type: protein-coding] || 103312989 [Gene Symbol: LOC103312989] [Locus Tag: TcasGA2_TC014116] [Chromosome: LG5] [Map Location: ] [Description: carboxypeptidase N subunit 2] [Gene Type: protein-coding]","LOC659317; TcasGA2_TC013697 || LOC103312989; TcasGA2_TC014116"]
[649,"NC_007420.3",6044873,"SNV","A","G","Heterozygous",9,23,39.13,1,4,5,0.44,37.11,9,24,3,5,-0.6,0.59,0.99,"no","A/G","No",1,64.36,"XP_971397.2:c.626A>G","XP_971397.2:p.Asn209Ser","LOC660041",660041,null,"660041 [Gene Symbol: LOC660041] [Locus Tag: TcasGA2_TC014124] [Chromosome: LG5] [Map Location: ] [Description: Krueppel-like factor 11] [Gene Type: protein-coding]","LOC660041; TcasGA2_TC014124"]
[650,"NC_007420.3",6057769,"SNV","T","G","Heterozygous",14,24,58.33,1,12,5,0.29,36.57,17,27,5,11,-0.23,0.73,0.84,"no","G/T","No",1,69.95,"XP_008193260.1:c.[692A>C]; XP_008193261.1:c.[692A>C]; XP_015835498.1:c.[692A>C]","XP_008193260.1:p.[Glu231Ala]; XP_008193261.1:p.[Glu231Ala]; XP_015835498.1:p.[Glu231Ala]","LOC660108",660108,null,"660108 [Gene Symbol: LOC660108] [Locus Tag: TcasGA2_TC013686] [Chromosome: LG5] [Map Location: ] [Description: coiled-coil and C2 domain-containing protein 1-like] [Gene Type: protein-coding]","TcasGA2_TC013686; LOC660108"]
[651,"NC_007420.3",6057785,"SNV","A","G","Homozygous",26,26,100,1,23,5,0.18,38.69,28,28,8,19,null,1,1,"no","G/G","No",1,98.15,"XP_008193261.1:c.[676T>C]; XP_008193260.1:c.[676T>C]; XP_015835498.1:c.[676T>C]","XP_008193261.1:p.[Ser226Pro]; XP_008193260.1:p.[Ser226Pro]; XP_015835498.1:p.[Ser226Pro]","LOC660108",660108,null,"660108 [Gene Symbol: LOC660108] [Locus Tag: TcasGA2_TC013686] [Chromosome: LG5] [Map Location: ] [Description: coiled-coil and C2 domain-containing protein 1-like] [Gene Type: protein-coding]","TcasGA2_TC013686; LOC660108"]
[652,"NC_007420.3",6057830,"SNV","A","G","Heterozygous",5,24,20.83,0.92,4,1,0.2,34.8,5,25,3,5,-0.36,0.18,0.44,"no","A/G","No",1,10.99,"XP_008193261.1:c.[631T>C]; XP_008193260.1:c.[631T>C]; XP_015835498.1:c.[631T>C]","XP_008193261.1:p.[Ser211Pro]; XP_008193260.1:p.[Ser211Pro]; XP_015835498.1:p.[Ser211Pro]","LOC660108",660108,null,"660108 [Gene Symbol: LOC660108] [Locus Tag: TcasGA2_TC013686] [Chromosome: LG5] [Map Location: ] [Description: coiled-coil and C2 domain-containing protein 1-like] [Gene Type: protein-coding]","TcasGA2_TC013686; LOC660108"]
[653,"NC_007420.3",6057839,"SNV","T","A","Homozygous",18,20,90,0.99,7,12,0.37,34.56,19,21,6,11,null,1,1,"no","A/A","No",1,20.25,"XP_015835498.1:c.[622A>T]; XP_008193261.1:c.[622A>T]; XP_008193260.1:c.[622A>T]","XP_015835498.1:p.[Thr208Ser]; XP_008193261.1:p.[Thr208Ser]; XP_008193260.1:p.[Thr208Ser]","LOC660108",660108,null,"660108 [Gene Symbol: LOC660108] [Locus Tag: TcasGA2_TC013686] [Chromosome: LG5] [Map Location: ] [Description: coiled-coil and C2 domain-containing protein 1-like] [Gene Type: protein-coding]","TcasGA2_TC013686; LOC660108"]
[654,"NC_007420.3",6226571,"SNV","T","C","Heterozygous",12,21,57.14,1,12,1,0.08,38.19,13,25,7,8,null,0.69,0.87,"no","complex","No",1,200,"XP_015835373.1:c.[8315T>C]; XP_015835398.1:c.[7325T>C]; XP_015835377.1:c.[8438T>C]; XP_015835380.1:c.[8282T>C]; XP_015835391.1:c.[7916T>C]; XP_015835395.1:c.[7580T>C]; XP_015835396.1:c.[7556T>C]; XP_015835383.1:c.[8192T>C]; XP_015835385.1:c.[8162T>C]; XP_015835387.1:c.[8078T>C]; XP_015835397.1:c.[7469T>C]; XP_015835374.1:c.[8312T>C]; XP_015835378.1:c.[8297T>C]; XP_015835371.1:c.[8438T>C]; XP_015835382.1:c.[8207T>C]; XP_015835369.1:c.[8438T>C]; XP_015835384.1:c.[8171T>C]; XP_015835379.1:c.[8294T>C]; XP_015835394.1:c.[7685T>C]; XP_015835381.1:c.[8228T>C]; XP_015835386.1:c.[8138T>C]; XP_015835390.1:c.[7946T>C]; XP_015835389.1:c.[7952T>C]; XP_015835372.1:c.[8327T>C]; XP_015835392.1:c.[7811T>C]; XP_015835388.1:c.[7961T>C]; XP_015835370.1:c.[8423T>C]; XP_015835399.1:c.[6698T>C]; XP_015835376.1:c.[8312T>C]; XP_015835393.1:c.[7700T>C]","XP_015835373.1:p.[Leu2772Pro]; XP_015835398.1:p.[Leu2442Pro]; XP_015835377.1:p.[Leu2813Pro]; XP_015835380.1:p.[Leu2761Pro]; XP_015835391.1:p.[Leu2639Pro]; XP_015835395.1:p.[Leu2527Pro]; XP_015835396.1:p.[Leu2519Pro]; XP_015835383.1:p.[Leu2731Pro]; XP_015835385.1:p.[Leu2721Pro]; XP_015835387.1:p.[Leu2693Pro]; XP_015835397.1:p.[Leu2490Pro]; XP_015835374.1:p.[Leu2771Pro]; XP_015835378.1:p.[Leu2766Pro]; XP_015835371.1:p.[Leu2813Pro]; XP_015835382.1:p.[Leu2736Pro]; XP_015835369.1:p.[Leu2813Pro]; XP_015835384.1:p.[Leu2724Pro]; XP_015835379.1:p.[Leu2765Pro]; XP_015835394.1:p.[Leu2562Pro]; XP_015835381.1:p.[Leu2743Pro]; XP_015835386.1:p.[Leu2713Pro]; XP_015835390.1:p.[Leu2649Pro]; XP_015835389.1:p.[Leu2651Pro]; XP_015835372.1:p.[Leu2776Pro]; XP_015835392.1:p.[Leu2604Pro]; XP_015835388.1:p.[Leu2654Pro]; XP_015835370.1:p.[Leu2808Pro]; XP_015835399.1:p.[Leu2233Pro]; XP_015835376.1:p.[Leu2771Pro]; XP_015835393.1:p.[Leu2567Pro]","LOC660769",660769,null,"660769 [Gene Symbol: LOC660769] [Locus Tag: TcasGA2_TC030735] [Chromosome: LG5] [Map Location: ] [Description: basement membrane-specific heparan sulfate proteoglycan core protein] [Gene Type: protein-coding]","LOC660769; TcasGA2_TC030735"]
[655,"NC_007420.3","6226571..6226572","MNV","TG","CC","Heterozygous",9,21,42.86,1,9,3,0.25,38.96,12,25,6,7,null,0.95,0.92,"no","complex","No",1,200,"XP_015835398.1:c.[7325_7326delTGinsCC]; XP_015835393.1:c.[7700_7701delTGinsCC]; XP_015835385.1:c.[8162_8163delTGinsCC]; XP_015835377.1:c.[8438_8439delTGinsCC]; XP_015835381.1:c.[8228_8229delTGinsCC]; XP_015835383.1:c.[8192_8193delTGinsCC]; XP_015835378.1:c.[8297_8298delTGinsCC]; XP_015835397.1:c.[7469_7470delTGinsCC]; XP_015835379.1:c.[8294_8295delTGinsCC]; XP_015835369.1:c.[8438_8439delTGinsCC]; XP_015835387.1:c.[8078_8079delTGinsCC]; XP_015835399.1:c.[6698_6699delTGinsCC]; XP_015835386.1:c.[8138_8139delTGinsCC]; XP_015835395.1:c.[7580_7581delTGinsCC]; XP_015835370.1:c.[8423_8424delTGinsCC]; XP_015835384.1:c.[8171_8172delTGinsCC]; XP_015835389.1:c.[7952_7953delTGinsCC]; XP_015835391.1:c.[7916_7917delTGinsCC]; XP_015835394.1:c.[7685_7686delTGinsCC]; XP_015835380.1:c.[8282_8283delTGinsCC]; XP_015835392.1:c.[7811_7812delTGinsCC]; XP_015835388.1:c.[7961_7962delTGinsCC]; XP_015835382.1:c.[8207_8208delTGinsCC]; XP_015835376.1:c.[8312_8313delTGinsCC]; XP_015835371.1:c.[8438_8439delTGinsCC]; XP_015835373.1:c.[8315_8316delTGinsCC]; XP_015835396.1:c.[7556_7557delTGinsCC]; XP_015835374.1:c.[8312_8313delTGinsCC]; XP_015835372.1:c.[8327_8328delTGinsCC]; XP_015835390.1:c.[7946_7947delTGinsCC]","XP_015835398.1:p.[Leu2442Pro]; XP_015835393.1:p.[Leu2567Pro]; XP_015835385.1:p.[Leu2721Pro]; XP_015835377.1:p.[Leu2813Pro]; XP_015835381.1:p.[Leu2743Pro]; XP_015835383.1:p.[Leu2731Pro]; XP_015835378.1:p.[Leu2766Pro]; XP_015835397.1:p.[Leu2490Pro]; XP_015835379.1:p.[Leu2765Pro]; XP_015835369.1:p.[Leu2813Pro]; XP_015835387.1:p.[Leu2693Pro]; XP_015835399.1:p.[Leu2233Pro]; XP_015835386.1:p.[Leu2713Pro]; XP_015835395.1:p.[Leu2527Pro]; XP_015835370.1:p.[Leu2808Pro]; XP_015835384.1:p.[Leu2724Pro]; XP_015835389.1:p.[Leu2651Pro]; XP_015835391.1:p.[Leu2639Pro]; XP_015835394.1:p.[Leu2562Pro]; XP_015835380.1:p.[Leu2761Pro]; XP_015835392.1:p.[Leu2604Pro]; XP_015835388.1:p.[Leu2654Pro]; XP_015835382.1:p.[Leu2736Pro]; XP_015835376.1:p.[Leu2771Pro]; XP_015835371.1:p.[Leu2813Pro]; XP_015835373.1:p.[Leu2772Pro]; XP_015835396.1:p.[Leu2519Pro]; XP_015835374.1:p.[Leu2771Pro]; XP_015835372.1:p.[Leu2776Pro]; XP_015835390.1:p.[Leu2649Pro]","LOC660769",660769,null,"660769 [Gene Symbol: LOC660769] [Locus Tag: TcasGA2_TC030735] [Chromosome: LG5] [Map Location: ] [Description: basement membrane-specific heparan sulfate proteoglycan core protein] [Gene Type: protein-coding]","LOC660769; TcasGA2_TC030735"]
[656,"NC_007420.3",6614210,"SNV","G","A","Homozygous",18,21,85.71,0.82,9,10,0.47,38.33,19,22,8,9,null,0.98,1,"no","A/A","No",1,7.42,"XP_008193316.1:c.340G>A","XP_008193316.1:p.Asp114Asn","LOC103313000",103313000,null,"103313000 [Gene Symbol: LOC103313000] [Locus Tag: TcasGA2_TC014145] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313000] [Gene Type: protein-coding]","LOC103313000; TcasGA2_TC014145"]
[657,"NC_007420.3",6800033,"SNV","G","A","Heterozygous",15,21,71.43,1,3,12,0.2,38.67,15,22,10,10,-0.35,0.78,0.72,"no","A/G","No",1,31.75,"XP_015835509.1:c.[13G>A]; XP_015835508.1:c.[13G>A]; XP_973694.1:c.[13G>A]; XP_015835506.1:c.[13G>A]","XP_015835509.1:p.[Asp5Asn]; XP_015835508.1:p.[Asp5Asn]; XP_973694.1:p.[Asp5Asn]; XP_015835506.1:p.[Asp5Asn]","LOC662510",662510,null,"662510 [Gene Symbol: LOC662510] [Locus Tag: TcasGA2_TC014156] [Chromosome: LG5] [Map Location: ] [Description: organic cation transporter protein] [Gene Type: protein-coding]","TcasGA2_TC014156; LOC662510"]
[658,"NC_007420.3","6957284^6957285","Insertion","-","T","Homozygous",21,21,100,1,8,13,0.38,38.57,21,21,10,12,null,1,1,"no","T/T","No",1,84.7,"XP_015835242.1:c.[1357_1358insA]; XP_015835243.1:c.[1249_1250insA]","XP_015835242.1:p.[Thr453fs]; XP_015835243.1:p.[Thr417fs]","LOC103313003",103313003,null,"103313003 [Gene Symbol: LOC103313003] [Locus Tag: TcasGA2_TC013651] [Chromosome: LG5] [Map Location: ] [Description: melanoma-associated antigen E1] [Gene Type: protein-coding]","LOC103313003; TcasGA2_TC013651"]
[659,"NC_007420.3","6957289^6957290","Insertion","-","A","Homozygous",19,20,95,1,6,13,0.32,38.47,19,20,9,11,null,1,1,"no","A/A","No",1,50.16,"XP_015835243.1:c.[1244_1245insT]; XP_015835242.1:c.[1352_1353insT]","XP_015835243.1:p.[Tyr416fs]; XP_015835242.1:p.[Tyr452fs]","LOC103313003",103313003,null,"103313003 [Gene Symbol: LOC103313003] [Locus Tag: TcasGA2_TC013651] [Chromosome: LG5] [Map Location: ] [Description: melanoma-associated antigen E1] [Gene Type: protein-coding]","LOC103313003; TcasGA2_TC013651"]
[660,"NC_007420.3",7111069,"SNV","T","G","Homozygous",22,22,100,1,11,11,0.5,37.18,22,22,15,17,null,1,1,"no","G/G","No",1,86.11,"XP_008193190.1:c.16A>C","XP_008193190.1:p.Ile6Leu","LOC103312976",103312976,null,"103312976 [Gene Symbol: LOC103312976] [Locus Tag: TcasGA2_TC013644] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312976] [Gene Type: protein-coding]","LOC103312976; TcasGA2_TC013644"]
[661,"NC_007420.3",7111078,"SNV","T","C","Homozygous",22,22,100,1,11,11,0.5,37.95,22,22,15,17,null,1,1,"no","C/C","No",1,86.13,"XP_008193190.1:c.7A>G","XP_008193190.1:p.Ile3Val","LOC103312976",103312976,null,"103312976 [Gene Symbol: LOC103312976] [Locus Tag: TcasGA2_TC013644] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312976] [Gene Type: protein-coding]","LOC103312976; TcasGA2_TC013644"]
[662,"NC_007420.3",7143652,"SNV","T","C","Homozygous",21,21,100,1,15,9,0.38,38.05,24,24,15,13,null,1,1,"no","C/C","No",1,83.13,"XP_967786.3:c.1003A>G","XP_967786.3:p.Asn335Asp","LOC656144",656144,null,"656144 [Gene Symbol: LOC656144] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: serpin peptidase inhibitor 6] [Gene Type: protein-coding]","LOC656144; Serpin6"]
[663,"NC_007420.3",7305466,"SNV","A","G","Homozygous",28,29,96.55,1,27,9,0.25,36.29,36,38,9,22,null,0.99,1,"no","G/G","No",1,79.68,"XP_008200429.1:c.[1360T>C]; XP_008200430.1:c.[1360T>C]; XP_015835265.1:c.[1240T>C]; XP_015835266.1:c.[985T>C]; XP_015835263.1:c.[1360T>C]","XP_008200429.1:p.[Ser454Pro]; XP_008200430.1:p.[Ser454Pro]; XP_015835265.1:p.[Ser414Pro]; XP_015835266.1:p.[Ser329Pro]; XP_015835263.1:p.[Ser454Pro]","LOC658981",658981,null,"658981 [Gene Symbol: LOC658981] [Locus Tag: TcasGA2_TC010434] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","TcasGA2_TC010434; LOC658981"]
[664,"NC_007420.3",7308909,"SNV","T","C","Homozygous",22,22,100,1,9,16,0.36,36.32,25,25,9,11,null,1,1,"no","C/C","No",1,86.13,"XP_015835265.1:c.[268A>G]; XP_008200430.1:c.[268A>G]; XP_015835263.1:c.[268A>G]; XP_008200429.1:c.[268A>G]","XP_015835265.1:p.[Ser90Gly]; XP_008200430.1:p.[Ser90Gly]; XP_015835263.1:p.[Ser90Gly]; XP_008200429.1:p.[Ser90Gly]","LOC658981",658981,null,"658981 [Gene Symbol: LOC658981] [Locus Tag: TcasGA2_TC010434] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","TcasGA2_TC010434; LOC658981"]
[665,"NC_007420.3",7323325,"SNV","G","T","Homozygous",20,20,100,1,9,11,0.45,36.4,20,20,10,11,null,1,1,"no","T/T","No",1,81.7,"XP_008200435.1:c.3845C>A","XP_008200435.1:p.Ala1282Asp","LOC659355",659355,null,"659355 [Gene Symbol: LOC659355] [Locus Tag: TcasGA2_TC010431] [Chromosome: LG5] [Map Location: ] [Description: maestro heat-like repeat-containing protein family member 1] [Gene Type: protein-coding]","TcasGA2_TC010431; LOC659355"]
[666,"NC_007420.3",7328496,"SNV","A","G","Homozygous",20,20,100,1,13,12,0.48,34.55,25,25,15,16,null,1,1,"no","G/G","No",1,80.08,"XP_970830.2:c.835A>G","XP_970830.2:p.Thr279Ala","LOC659429",659429,null,"659429 [Gene Symbol: LOC659429] [Locus Tag: TcasGA2_TC010440] [Chromosome: LG5] [Map Location: ] [Description: ubiquilin-1] [Gene Type: protein-coding]","TcasGA2_TC010440; LOC659429"]
[667,"NC_007420.3",7485028,"SNV","T","C","Homozygous",22,23,95.65,1,15,9,0.38,37.36,24,25,12,14,null,1,1,"no","C/C","No",1,61.21,"XP_008200466.1:c.[863T>C]; XP_972506.1:c.[863T>C]","XP_008200466.1:p.[Met288Thr]; XP_972506.1:p.[Met288Thr]","LOC661238",661238,null,"661238 [Gene Symbol: LOC661238] [Locus Tag: TcasGA2_TC010453] [Chromosome: LG5] [Map Location: ] [Description: PHD finger protein 20] [Gene Type: protein-coding]","LOC661238; TcasGA2_TC010453"]
[668,"NC_007420.3",7488595,"SNV","T","C","Heterozygous",6,20,30,1,2,4,0.33,40.5,6,21,2,3,2.8,0.12,0.82,"no","C/T","No",1,34.68,"XP_972559.1:c.496A>G","XP_972559.1:p.Ile166Val","LOC661296",661296,null,"661296 [Gene Symbol: LOC661296] [Locus Tag: TcasGA2_TC010412] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC661296] [Gene Type: protein-coding]","TcasGA2_TC010412; LOC661296"]
[669,"NC_007420.3",7600354,"SNV","T","G","Homozygous",21,21,100,1,10,11,0.48,37.76,21,21,14,17,null,1,1,"no","G/G","No",1,83.1,"XP_008200485.1:c.220T>G","XP_008200485.1:p.Ser74Ala","LOC103314938",103314938,null,"103314938 [Gene Symbol: LOC103314938] [Locus Tag: TcasGA2_TC033102] [Chromosome: LG5] [Map Location: ] [Description: nuclear receptor subfamily 2 group E member 1] [Gene Type: protein-coding]","LOC103314938; TcasGA2_TC033102"]
[670,"NC_007420.3",7856085,"SNV","G","A","Homozygous",24,24,100,1,14,10,0.42,38,24,24,12,20,null,1,1,"no","A/A","No",1,93.72,"XP_015835345.1:c.[217G>A]; XP_008200508.1:c.[217G>A]","XP_015835345.1:p.[Asp73Asn]; XP_008200508.1:p.[Asp73Asn]","LOC662427",662427,null,"662427 [Gene Symbol: LOC662427] [Locus Tag: TcasGA2_TC010468] [Chromosome: LG5] [Map Location: ] [Description: fibronectin type-III domain-containing protein 3A] [Gene Type: protein-coding]","LOC662427; TcasGA2_TC010468"]
[671,"NC_007420.3",7990715,"SNV","C","T","Homozygous",31,31,100,1,24,9,0.27,37.39,33,33,11,24,null,1,1,"no","T/T","No",1,114.8,"XP_008193619.1:c.[776C>T]; XP_008193620.1:c.[431C>T]","XP_008193619.1:p.[Ser259Leu]; XP_008193620.1:p.[Ser144Leu]","LOC103313081",103313081,null,"103313081 [Gene Symbol: LOC103313081] [Locus Tag: TcasGA2_TC014252] [Chromosome: LG5] [Map Location: ] [Description: tetratricopeptide repeat protein 25] [Gene Type: protein-coding]","LOC103313081; TcasGA2_TC014252"]
[672,"NC_007420.3",8309917,"SNV","T","A","Homozygous",21,21,100,1,12,13,0.48,39,25,25,10,11,null,1,1,"no","A/A","No",1,84.69,"XP_008193661.1:c.1131A>T","XP_008193661.1:p.Glu377Asp","LOC103313092",103313092,null,"103313092 [Gene Symbol: LOC103313092] [Locus Tag: TcasGA2_TC013535] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313092] [Gene Type: protein-coding]","TcasGA2_TC013535; LOC103313092"]
[673,"NC_007420.3",8507003,"SNV","C","A","Heterozygous",10,21,47.62,1,7,4,0.36,39.5,11,23,6,6,0.95,0.85,0.93,"no","A/C","No",1,78.02,"XP_972170.1:c.1117C>A","XP_972170.1:p.Pro373Thr","LOC660878",660878,null,"660878 [Gene Symbol: LOC660878] [Locus Tag: TcasGA2_TC014290] [Chromosome: LG5] [Map Location: ] [Description: spire] [Gene Type: protein-coding]","TcasGA2_TC014290; spir; LOC660878"]
[674,"NC_007420.3",8596830,"SNV","T","A","Heterozygous",13,22,59.09,1,5,8,0.38,35.92,13,22,8,12,-1.3,0.9,0.93,"no","A/T","No",1,66.24,"XP_972626.2:c.[638T>A]; XP_008193697.1:c.[638T>A]; XP_008193698.1:c.[638T>A]","XP_972626.2:p.[Phe213Tyr]; XP_008193697.1:p.[Phe213Tyr]; XP_008193698.1:p.[Phe213Tyr]","LOC661373",661373,null,"661373 [Gene Symbol: LOC661373] [Locus Tag: TcasGA2_TC014296] [Chromosome: LG5] [Map Location: ] [Description: T-box transcription factor TBX20] [Gene Type: protein-coding]","Tbx20; TcasGA2_TC014296; midline; H15; mid; LOC661373"]
[675,"NC_007420.3",8675921,"SNV","G","T","Homozygous",18,21,85.71,0.82,14,4,0.22,36.72,18,21,8,14,null,1,1,"no","T/T","No",1,7.36,"XP_972790.1:c.337C>A","XP_972790.1:p.Leu113Ile","LOC661546",661546,null,"661546 [Gene Symbol: LOC661546] [Locus Tag: TcasGA2_TC013506] [Chromosome: LG5] [Map Location: ] [Description: mitochondrial import inner membrane translocase subunit Tim21] [Gene Type: protein-coding]","TcasGA2_TC013506; LOC661546"]
[676,"NC_007420.3",8738742,"SNV","T","C","Homozygous",29,29,100,1,7,23,0.23,38.17,30,30,14,18,null,1,1,"no","C/C","No",1,107.2,"XP_008193713.1:c.[3895A>G]; XP_008193710.1:c.[4045A>G]; XP_015836011.1:c.[3973A>G]; XP_008193712.1:c.[3946A>G]","XP_008193713.1:p.[Ile1299Val]; XP_008193710.1:p.[Ile1349Val]; XP_015836011.1:p.[Ile1325Val]; XP_008193712.1:p.[Ile1316Val]","LOC103313104",103313104,null,"103313104 [Gene Symbol: LOC103313104] [Locus Tag: TcasGA2_TC013501] [Chromosome: LG5] [Map Location: ] [Description: homeotic protein spalt-major] [Gene Type: protein-coding]","spalt; TcasGA2_TC013501; sal; LOC103313104"]
[677,"NC_007420.3",8928505,"SNV","C","T","Homozygous",20,20,100,1,12,10,0.45,37.35,22,22,14,16,null,1,1,"no","T/T","No",1,81.7,"XP_973596.2:c.1124C>T","XP_973596.2:p.Thr375Ile","LOC662406",662406,null,"662406 [Gene Symbol: LOC662406] [Locus Tag: TcasGA2_TC014310] [Chromosome: LG5] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD2] [Gene Type: protein-coding]","TcasGA2_TC014310; LOC662406"]
[678,"NC_007420.3",8928646,"SNV","G","C","Homozygous",21,21,100,1,17,6,0.26,38.05,23,23,12,14,null,1,1,"no","C/C","No",1,83.12,"XP_973596.2:c.1265G>C","XP_973596.2:p.Ser422Thr","LOC662406",662406,null,"662406 [Gene Symbol: LOC662406] [Locus Tag: TcasGA2_TC014310] [Chromosome: LG5] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD2] [Gene Type: protein-coding]","TcasGA2_TC014310; LOC662406"]
[679,"NC_007420.3",8934547,"SNV","C","T","Homozygous",20,20,100,1,6,16,0.27,37.3,22,22,9,11,null,1,1,"no","T/T","No",1,81.7,"XP_008193718.1:c.313G>A","XP_008193718.1:p.Ala105Thr","LOC662444",662444,null,"662444 [Gene Symbol: LOC662444] [Locus Tag: TcasGA2_TC013493] [Chromosome: LG5] [Map Location: ] [Description: kinesin 3C] [Gene Type: protein-coding]","kinesin-3C; TcasGA2_TC013493; LOC662444; Mot; nebbish; tio; neb"]
[680,"NC_007420.3",8934850,"SNV","G","A","Homozygous",27,27,100,1,11,20,0.35,40.11,31,31,9,11,null,1,1,"no","A/A","No",1,102.74,"XP_008193718.1:c.10C>T","XP_008193718.1:p.Pro4Ser","LOC662444",662444,null,"662444 [Gene Symbol: LOC662444] [Locus Tag: TcasGA2_TC013493] [Chromosome: LG5] [Map Location: ] [Description: kinesin 3C] [Gene Type: protein-coding]","kinesin-3C; TcasGA2_TC013493; LOC662444; Mot; nebbish; tio; neb"]
[681,"NC_007420.3",8935582,"SNV","G","A","Homozygous",31,31,100,1,22,9,0.29,39.71,31,31,11,18,null,1,1,"no","A/A","No",1,114.77,"XP_973661.1:c.443G>A","XP_973661.1:p.Arg148Lys","LOC662476",662476,null,"662476 [Gene Symbol: LOC662476] [Locus Tag: TcasGA2_TC014311] [Chromosome: LG5] [Map Location: ] [Description: 39S ribosomal protein L3, mitochondrial] [Gene Type: protein-coding]","LOC662476; TcasGA2_TC014311"]
[682,"NC_007420.3",8968989,"SNV","G","T","Homozygous",22,22,100,1,9,15,0.38,37.18,24,24,14,13,null,1,1,"no","T/T","No",1,87.71,"XP_008193731.1:c.[708C>A]; XP_008193732.1:c.[430-898C>A]","XP_008193731.1:p.Asp236Glu","LOC662848",662848,null,"662848 [Gene Symbol: LOC662848] [Locus Tag: TcasGA2_TC013484] [Chromosome: LG5] [Map Location: ] [Description: gustatory receptor Gr107] [Gene Type: protein-coding]","LOC662848; Gr107; TcasGA2_TC013484"]
[683,"NC_007420.3",8970929,"SNV","G","A","Homozygous",24,24,100,1,10,17,0.37,35.92,27,27,11,17,null,1,1,"no","A/A","No",1,90.71,"XP_008193731.1:c.[190C>T]; XP_008193730.1:c.[190C>T]; XP_008193732.1:c.[190C>T]","XP_008193731.1:p.[Pro64Ser]; XP_008193730.1:p.[Pro64Ser]; XP_008193732.1:p.[Pro64Ser]","LOC662848",662848,null,"662848 [Gene Symbol: LOC662848] [Locus Tag: TcasGA2_TC013484] [Chromosome: LG5] [Map Location: ] [Description: gustatory receptor Gr107] [Gene Type: protein-coding]","LOC662848; Gr107; TcasGA2_TC013484"]
[684,"NC_007420.3",9007177,"SNV","T","A","Heterozygous",5,21,23.81,0.98,3,2,0.4,37.2,5,22,4,3,1.53,0.14,0.21,"no","A/T","No",1,17.87,"XP_015835966.1:c.[667A>T]; XP_015835967.1:c.[667A>T]; XP_015835961.1:c.[652A>T]; XP_015835957.1:c.[667A>T]; XP_015835960.1:c.[667A>T]; XP_015835962.1:c.[667A>T]; XP_015835965.1:c.[667A>T]; XP_015835971.1:c.[652A>T]; XP_015835958.1:c.[667A>T]; XP_015835964.1:c.[667A>T]; XP_015835968.1:c.[667A>T]; XP_015835959.1:c.[667A>T]","XP_015835966.1:p.[Thr223Ser]; XP_015835967.1:p.[Thr223Ser]; XP_015835961.1:p.[Thr218Ser]; XP_015835957.1:p.[Thr223Ser]; XP_015835960.1:p.[Thr223Ser]; XP_015835962.1:p.[Thr223Ser]; XP_015835965.1:p.[Thr223Ser]; XP_015835971.1:p.[Thr218Ser]; XP_015835958.1:p.[Thr223Ser]; XP_015835964.1:p.[Thr223Ser]; XP_015835968.1:p.[Thr223Ser]; XP_015835959.1:p.[Thr223Ser]","LOC662876",662876,null,"662876 [Gene Symbol: LOC662876] [Locus Tag: TcasGA2_TC013482] [Chromosome: LG5] [Map Location: ] [Description: protein still life, isoforms C/SIF type 2] [Gene Type: protein-coding]","TcasGA2_TC013482; LOC662876"]
[685,"NC_007420.3",9022843,"SNV","A","C","Homozygous",34,34,100,1,19,19,0.5,37,38,38,17,21,null,1,1,"no","C/C","No",1,122.25,"XP_974097.1:c.222A>C","XP_974097.1:p.Leu74Phe","LOC662935",662935,null,"662935 [Gene Symbol: LOC662935] [Locus Tag: TcasGA2_TC014317] [Chromosome: LG5] [Map Location: ] [Description: spermine oxidase] [Gene Type: protein-coding]","TcasGA2_TC014317; LOC662935"]
[686,"NC_007420.3",9042349,"SNV","G","A","Homozygous",26,29,89.66,1,12,17,0.41,37.85,29,32,15,16,null,0.99,1,"no","A/A","No",1,28.84,"XP_015836120.1:c.2555C>T","XP_015836120.1:p.Pro852Leu","LOC663202",663202,null,"663202 [Gene Symbol: LOC663202] [Locus Tag: TcasGA2_TC030779] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663202] [Gene Type: protein-coding]","LOC663202; TcasGA2_TC030779"]
[687,"NC_007420.3",9042463,"SNV","A","G","Heterozygous",14,22,63.64,1,10,7,0.41,37.36,17,25,9,10,-2.76,0.95,0.99,"no","A/G","No",1,53.49,"XP_015836120.1:c.2489T>C","XP_015836120.1:p.Ile830Thr","LOC663202",663202,null,"663202 [Gene Symbol: LOC663202] [Locus Tag: TcasGA2_TC030779] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663202] [Gene Type: protein-coding]","LOC663202; TcasGA2_TC030779"]
[688,"NC_007420.3",9089715,"SNV","G","A","Homozygous",22,22,100,1,10,12,0.45,38.14,22,22,11,16,null,1,1,"no","A/A","No",1,87.71,"XP_008193734.1:c.4949C>T","XP_008193734.1:p.Pro1650Leu","LOC103313111",103313111,null,"103313111 [Gene Symbol: LOC103313111] [Locus Tag: TcasGA2_TC013472] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC013472; LOC103313111"]
[689,"NC_007420.3","9090509^9090510","Insertion","-","C","Homozygous",20,20,100,1,14,10,0.42,36.5,24,24,14,17,null,1,1,"no","C/C","No",1,80.11,"XP_008193734.1:c.4204_4205insG","XP_008193734.1:p.Asp1402fs","LOC103313111",103313111,null,"103313111 [Gene Symbol: LOC103313111] [Locus Tag: TcasGA2_TC013472] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC013472; LOC103313111"]
[690,"NC_007420.3",9113516,"SNV","A","T","Homozygous",21,21,100,1,9,14,0.39,38.52,23,23,15,17,null,1,1,"no","T/T","No",1,84.7,"XP_015835630.1:c.2664A>T","XP_015835630.1:p.Gln888His","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[691,"NC_007420.3",9113572,"SNV","C","T","Homozygous",39,39,100,1,29,19,0.4,37.46,48,48,25,29,null,1,1,"no","T/T","No",1,138.75,"XP_015835630.1:c.2720C>T","XP_015835630.1:p.Thr907Ile","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[692,"NC_007420.3","9114200..9114201","MNV","AT","GC","Homozygous",22,22,100,1,17,6,0.26,35.55,23,23,14,18,null,1,1,"no","GC/GC","No",1,200,"XP_015835630.1:c.3348_3349delATinsGC","XP_015835630.1:p.Ser1117Pro","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[693,"NC_007420.3",9114297,"SNV","A","C","Homozygous",25,25,100,1,8,20,0.29,34.96,28,28,13,17,null,1,1,"no","C/C","No",1,95.14,"XP_015835630.1:c.3445A>C","XP_015835630.1:p.Asn1149His","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[694,"NC_007420.3",9115221,"SNV","T","C","Homozygous",20,20,100,1,3,18,0.14,37.8,21,21,9,13,null,1,1,"no","C/C","No",1,80.12,"XP_015835630.1:c.4369T>C","XP_015835630.1:p.Phe1457Leu","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[695,"NC_007420.3",9116121,"SNV","T","G","Homozygous",23,23,100,1,13,16,0.45,36.09,29,29,9,16,null,1,1,"no","G/G","No",1,89.12,"XP_015835630.1:c.5167T>G","XP_015835630.1:p.Ser1723Ala","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[696,"NC_007420.3",9287456,"SNV","A","T","Homozygous",25,25,100,1,9,16,0.36,38.84,25,25,11,15,null,1,1,"no","T/T","No",1,96.74,"XP_001815756.1:c.[706T>A]; XP_008193754.1:c.[706T>A]","XP_001815756.1:p.[Phe236Ile]; XP_008193754.1:p.[Phe236Ile]","LOC100142497",100142497,null,"100142497 [Gene Symbol: LOC100142497] [Locus Tag: TcasGA2_TC013455] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC100142497; TcasGA2_TC013455"]
[697,"NC_007420.3",9477976,"SNV","A","T","Homozygous",20,20,100,1,8,16,0.33,40.15,24,24,16,11,null,1,1,"no","T/T","No",1,81.69,"XP_015835661.1:c.396T>A","XP_015835661.1:p.His132Gln","LOC107397960",107397960,null,"107397960 [Gene Symbol: LOC107397960] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: vanin-like protein 1] [Gene Type: protein-coding]","LOC107397960"]
[698,"NC_007420.3","9857595^9857596","Insertion","-","GGC","Homozygous",24,24,100,1,13,14,0.48,35.66,27,27,15,21,null,1,1,"no","GGC/GGC","No",1,200,"XP_008193555.1:c.[666_667insGCC]; XP_008193553.2:c.[2664_2665insGCC]","XP_008193555.1:p.[Asp222_Ser223insAla]; XP_008193553.2:p.[Asp888_Ser889insAla]","LOC658870, LOC658940","658870 , 658940",null,"658870 [Gene Symbol: LOC658870] [Locus Tag: TcasGA2_TC013423] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC658870] [Gene Type: protein-coding] || 658940 [Gene Symbol: LOC658940] [Locus Tag: TcasGA2_TC013424] [Chromosome: LG5] [Map Location: ] [Description: Golgi integral membrane protein 4] [Gene Type: protein-coding]","LOC658870; TcasGA2_TC013423 || LOC658940; TcasGA2_TC013424"]
[699,"NC_007420.3","9959028..9959029","MNV","TA","CG","Homozygous",22,22,100,1,12,11,0.48,37.95,23,23,16,15,null,1,1,"no","CG/CG","No",1,200,"XP_015836094.1:c.[54_55delTAinsCG]; XP_015836093.1:c.[54_55delTAinsCG]","XP_015836094.1:p.[Ile19Val]; XP_015836093.1:p.[Ile19Val]","LOC660416",660416,null,"660416 [Gene Symbol: LOC660416] [Locus Tag: TcasGA2_TC014381] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC660416; TcasGA2_TC014381"]
[700,"NC_007420.3",9959172,"SNV","C","A","Homozygous",20,20,100,1,14,8,0.36,36.4,22,22,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_015836094.1:c.[148C>A]; XP_015836093.1:c.[148C>A]","XP_015836094.1:p.[Pro50Thr]; XP_015836093.1:p.[Pro50Thr]","LOC660416",660416,null,"660416 [Gene Symbol: LOC660416] [Locus Tag: TcasGA2_TC014381] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC660416; TcasGA2_TC014381"]
[701,"NC_007420.3",9965268,"SNV","C","T","Homozygous",20,20,100,1,9,13,0.41,37.8,22,22,12,14,null,1,1,"no","T/T","No",1,81.7,"XP_008193591.1:c.1370C>T","XP_008193591.1:p.Thr457Ile","LOC103313070",103313070,null,"103313070 [Gene Symbol: LOC103313070] [Locus Tag: TcasGA2_TC014382] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","TcasGA2_TC014382; LOC103313070"]
[702,"NC_007420.3",9976166,"SNV","G","C","Homozygous",24,24,100,1,20,8,0.29,38.04,28,28,12,20,null,1,1,"no","C/C","No",1,92.15,"XP_015836126.1:c.[3092G>C]; XP_015836125.1:c.[3092G>C]","XP_015836126.1:p.[Arg1031Pro]; XP_015836125.1:p.[Arg1031Pro]","LOC660599",660599,null,"660599 [Gene Symbol: LOC660599] [Locus Tag: TcasGA2_TC014384] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660599; TcasGA2_TC014384"]
[703,"NC_007420.3",9976170,"SNV","G","T","Homozygous",23,23,100,1,19,8,0.3,37.78,27,27,12,19,null,1,1,"no","T/T","No",1,90.72,"XP_015836125.1:c.[3096G>T]; XP_015836126.1:c.[3096G>T]","XP_015836125.1:p.[Gln1032His]; XP_015836126.1:p.[Gln1032His]","LOC660599",660599,null,"660599 [Gene Symbol: LOC660599] [Locus Tag: TcasGA2_TC014384] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660599; TcasGA2_TC014384"]
[704,"NC_007420.3",9976745,"SNV","G","A","Homozygous",21,21,100,1,9,13,0.41,39.95,22,22,12,13,null,1,1,"no","A/A","No",1,84.7,"XP_015836126.1:c.[3671G>A]; XP_015836125.1:c.[3671G>A]","XP_015836126.1:p.[Ser1224Asn]; XP_015836125.1:p.[Ser1224Asn]","LOC660599",660599,null,"660599 [Gene Symbol: LOC660599] [Locus Tag: TcasGA2_TC014384] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660599; TcasGA2_TC014384"]
[705,"NC_007420.3",9976757,"SNV","C","T","Homozygous",20,20,100,1,9,15,0.38,37.2,24,24,13,12,null,1,1,"no","T/T","No",1,81.69,"XP_015836125.1:c.[3683C>T]; XP_015836126.1:c.[3683C>T]","XP_015836125.1:p.[Ala1228Val]; XP_015836126.1:p.[Ala1228Val]","LOC660599",660599,null,"660599 [Gene Symbol: LOC660599] [Locus Tag: TcasGA2_TC014384] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660599; TcasGA2_TC014384"]
[706,"NC_007420.3",9998419,"SNV","A","C","Homozygous",20,20,100,1,18,6,0.25,39.2,24,24,12,9,null,1,1,"no","C/C","No",1,80.12,"XP_015835865.1:c.[1236A>C]; XP_008193575.1:c.[1236A>C]","XP_015835865.1:p.[Leu412Phe]; XP_008193575.1:p.[Leu412Phe]","LOC103313062",103313062,null,"103313062 [Gene Symbol: LOC103313062] [Locus Tag: TcasGA2_TC014390] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313062] [Gene Type: protein-coding]","TcasGA2_TC014390; P149; LOC103313062"]
[707,"NC_007420.3",9998433,"SNV","C","G","Homozygous",20,20,100,1,18,8,0.31,36.85,26,26,12,10,null,1,1,"no","G/G","No",1,80.09,"XP_015835865.1:c.[1250C>G]; XP_008193575.1:c.[1250C>G]","XP_015835865.1:p.[Thr417Arg]; XP_008193575.1:p.[Thr417Arg]","LOC103313062",103313062,null,"103313062 [Gene Symbol: LOC103313062] [Locus Tag: TcasGA2_TC014390] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313062] [Gene Type: protein-coding]","TcasGA2_TC014390; P149; LOC103313062"]
[708,"NC_007420.3",9998508,"SNV","C","T","Homozygous",21,21,100,1,14,9,0.39,37.33,23,23,11,15,null,1,1,"no","T/T","No",1,84.71,"XP_015835865.1:c.[1325C>T]; XP_008193575.1:c.[1325C>T]","XP_015835865.1:p.[Thr442Ile]; XP_008193575.1:p.[Thr442Ile]","LOC103313062",103313062,null,"103313062 [Gene Symbol: LOC103313062] [Locus Tag: TcasGA2_TC014390] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313062] [Gene Type: protein-coding]","TcasGA2_TC014390; P149; LOC103313062"]
[709,"NC_007420.3",10006447,"SNV","C","G","Homozygous",20,20,100,1,14,9,0.39,37.9,23,23,10,13,null,1,1,"no","G/G","No",1,80.09,"XP_972374.2:c.350C>G","XP_972374.2:p.Ala117Gly","LOC661049, LOC661098","661049 , 661098",null,"661049 [Gene Symbol: LOC661049] [Locus Tag: TcasGA2_TC013413] [Chromosome: LG5] [Map Location: ] [Description: beta-lactamase-like protein 2 homolog] [Gene Type: protein-coding] || 661098 [Gene Symbol: LOC661098] [Locus Tag: TcasGA2_TC014392] [Chromosome: LG5] [Map Location: ] [Description: protein D2] [Gene Type: protein-coding]","TcasGA2_TC013413; LOC661049 || LOC661098; TcasGA2_TC014392"]
[710,"NC_007420.3",10038188,"SNV","G","A","Homozygous",20,20,100,1,16,10,0.38,38.35,26,26,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_008193579.1:c.4858C>T","XP_008193579.1:p.Pro1620Ser","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[711,"NC_007420.3",10038191,"SNV","G","C","Homozygous",20,20,100,1,16,10,0.38,37.7,26,26,10,14,null,1,1,"no","C/C","No",1,80.11,"XP_008193579.1:c.4855C>G","XP_008193579.1:p.Arg1619Gly","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[712,"NC_007420.3",10038196,"SNV","G","A","Homozygous",20,20,100,1,15,10,0.4,38,25,25,10,14,null,1,1,"no","A/A","No",1,78.68,"XP_008193579.1:c.4850C>T","XP_008193579.1:p.Ala1617Val","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[713,"NC_007420.3",10040659,"SNV","G","T","Homozygous",21,21,100,1,17,4,0.19,37.67,21,21,9,16,null,1,1,"no","T/T","No",1,84.7,"XP_008193579.1:c.2545C>A","XP_008193579.1:p.Pro849Thr","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[714,"NC_007420.3",10040704,"SNV","C","A","Homozygous",27,27,100,1,20,12,0.38,37.74,32,32,13,21,null,1,1,"no","A/A","No",1,102.75,"XP_008193579.1:c.2500G>T","XP_008193579.1:p.Val834Phe","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[715,"NC_007420.3",10040740,"SNV","A","G","Homozygous",21,21,100,1,10,15,0.4,38.48,25,25,11,16,null,1,1,"no","G/G","No",1,83.1,"XP_008193579.1:c.2464T>C","XP_008193579.1:p.*822Arg","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[716,"NC_007420.3",10163369,"SNV","A","C","Homozygous",30,30,100,1,21,11,0.34,38.4,32,32,12,18,null,1,1,"no","C/C","No",1,110.21,"XP_015835805.1:c.2353A>C","XP_015835805.1:p.Thr785Pro","LOC662374",662374,null,"662374 [Gene Symbol: LOC662374] [Locus Tag: TcasGA2_TC014404] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC662374] [Gene Type: protein-coding]","TcasGA2_TC014404; LOC662374"]
[717,"NC_007420.3",10163958,"SNV","C","T","Homozygous",22,22,100,1,14,10,0.42,37.77,24,24,14,16,null,1,1,"no","T/T","No",1,87.71,"XP_015835805.1:c.2749C>T","XP_015835805.1:p.Leu917Phe","LOC662374",662374,null,"662374 [Gene Symbol: LOC662374] [Locus Tag: TcasGA2_TC014404] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC662374] [Gene Type: protein-coding]","TcasGA2_TC014404; LOC662374"]
[718,"NC_007420.3",10174924,"SNV","A","G","Homozygous",25,25,100,1,11,19,0.37,37.6,30,30,13,12,null,1,1,"no","G/G","No",1,95.14,"XP_015835840.1:c.[484T>C]; XP_973728.1:c.[532T>C]","XP_015835840.1:p.[Phe162Leu]; XP_973728.1:p.[Phe178Leu]","LOC662545",662545,null,"662545 [Gene Symbol: LOC662545] [Locus Tag: TcasGA2_TC013393] [Chromosome: LG5] [Map Location: ] [Description: dolichyldiphosphatase 1] [Gene Type: protein-coding]","TcasGA2_TC013393; LOC662545"]
[719,"NC_007420.3",10194572,"SNV","G","A","Homozygous",24,24,100,1,11,13,0.46,38.92,24,24,15,19,null,1,1,"no","A/A","No",1,93.72,"XP_008193838.1:c.[1338-67C>T]; XP_015835810.1:c.[1455-67C>T]; XP_008193837.1:c.[22G>A]; XP_015835811.1:c.[1410-67C>T]","XP_008193837.1:p.Gly8Ser","LOC662674, LOC662642, LOC103313142","662674 , 662642 , 103313142",null,"662674 [Gene Symbol: LOC662674] [Locus Tag: TcasGA2_TC014410] [Chromosome: LG5] [Map Location: ] [Description: guanine nucleotide-binding protein subunit beta-2] [Gene Type: protein-coding] || 662642 [Gene Symbol: LOC662642] [Locus Tag: TcasGA2_TC013390] [Chromosome: LG5] [Map Location: ] [Description: procollagen-lysine,2-oxoglutarate 5-dioxygenase 1] [Gene Type: protein-coding] || 103313142 [Gene Symbol: LOC103313142] [Locus Tag: TcasGA2_TC014408] [Chromosome: LG5] [Map Location: ] [Description: immunoglobulin domain-containing protein oig-1] [Gene Type: protein-coding]","LOC662674; TcasGA2_TC014410 || TcasGA2_TC013390; LOC662642 || TcasGA2_TC014408; LOC103313142"]
[720,"NC_007420.3",10202200,"SNV","G","A","Homozygous",20,20,100,1,7,13,0.35,38.65,20,20,9,8,null,1,1,"no","A/A","No",1,81.69,"XP_973883.2:c.584C>T","XP_973883.2:p.Ala195Val","LOC662707",662707,null,"662707 [Gene Symbol: LOC662707] [Locus Tag: TcasGA2_TC013389] [Chromosome: LG5] [Map Location: ] [Description: leukocyte elastase inhibitor] [Gene Type: protein-coding]","LOC662707; serpin29; TcasGA2_TC013389"]
[721,"NC_007420.3",10216410,"Deletion","G","-","Homozygous",24,24,100,1,10,14,0.42,35.62,24,24,13,17,null,1,1,"no","-/-","No",1,102.75,"XP_008193848.2:c.181delC","XP_008193848.2:p.Arg61fs","LOC103313143",103313143,null,"103313143 [Gene Symbol: LOC103313143] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313143] [Gene Type: protein-coding]","LOC103313143"]
[722,"NC_007420.3",10218273,"SNV","T","C","Homozygous",20,20,100,1,10,15,0.4,37.95,25,25,12,15,null,1,1,"no","C/C","No",1,80.11,"XP_973990.1:c.289A>G","XP_973990.1:p.Ile97Val","LOC662820",662820,null,"662820 [Gene Symbol: LOC662820] [Locus Tag: TcasGA2_TC013385] [Chromosome: LG5] [Map Location: ] [Description: GDP-fucose protein O-fucosyltransferase 1] [Gene Type: protein-coding]","TcasGA2_TC013385; LOC662820"]
[723,"NC_007420.3","10250740..10250741","MNV","CG","TA","Homozygous",21,21,100,1,11,14,0.44,35.27,25,25,14,16,null,1,1,"no","TA/TA","No",1,200,"XP_008193854.1:c.852_853delCGinsTA","XP_008193854.1:p.Val285Ile","LOC663179",663179,null,"663179 [Gene Symbol: LOC663179] [Locus Tag: TcasGA2_TC014420] [Chromosome: LG5] [Map Location: ] [Description: extended synaptotagmin-like protein 2b] [Gene Type: protein-coding]","TcasGA2_TC014420; LOC663179; Esyt2b"]
[724,"NC_007420.3",10252447,"SNV","G","A","Homozygous",21,21,100,1,10,15,0.4,37.05,25,25,9,12,null,1,1,"no","A/A","No",1,84.7,"XP_008193854.1:c.2195G>A","XP_008193854.1:p.Gly732Glu","LOC663179",663179,null,"663179 [Gene Symbol: LOC663179] [Locus Tag: TcasGA2_TC014420] [Chromosome: LG5] [Map Location: ] [Description: extended synaptotagmin-like protein 2b] [Gene Type: protein-coding]","TcasGA2_TC014420; LOC663179; Esyt2b"]
[725,"NC_007420.3",10255494,"SNV","A","G","Homozygous",21,21,100,1,13,11,0.46,37.48,24,24,11,13,null,1,1,"no","G/G","No",1,83.1,"XP_015835816.1:c.[1675A>G]; XP_015835815.1:c.[1675A>G]; XP_015835814.1:c.[1675A>G]; XP_008193857.1:c.[1675A>G]","XP_015835816.1:p.[Lys559Glu]; XP_015835815.1:p.[Lys559Glu]; XP_015835814.1:p.[Lys559Glu]; XP_008193857.1:p.[Lys559Glu]","LOC663203",663203,null,"663203 [Gene Symbol: LOC663203] [Locus Tag: TcasGA2_TC014421] [Chromosome: LG5] [Map Location: ] [Description: extended synaptotagmin-like protein 2c] [Gene Type: protein-coding]","LOC663203; Esyt2c; GLEAN_14421; TcasGA2_TC014421"]
[726,"NC_007420.3",10257294,"SNV","C","T","Homozygous",26,26,100,1,18,11,0.38,36.12,29,29,15,13,null,1,1,"no","T/T","No",1,99.74,"XP_008193906.1:c.199G>A","XP_008193906.1:p.Ala67Thr","LOC103313160",103313160,null,"103313160 [Gene Symbol: LOC103313160] [Locus Tag: TcasGA2_TC013380] [Chromosome: LG5] [Map Location: ] [Description: gastrula zinc finger protein XlCGF8.2DB] [Gene Type: protein-coding]","TcasGA2_TC013380; LOC103313160"]
[727,"NC_007420.3",10257296,"SNV","T","C","Homozygous",26,26,100,1,19,10,0.34,36.46,29,29,14,12,null,1,1,"no","C/C","No",1,98.17,"XP_008193906.1:c.197A>G","XP_008193906.1:p.His66Arg","LOC103313160",103313160,null,"103313160 [Gene Symbol: LOC103313160] [Locus Tag: TcasGA2_TC013380] [Chromosome: LG5] [Map Location: ] [Description: gastrula zinc finger protein XlCGF8.2DB] [Gene Type: protein-coding]","TcasGA2_TC013380; LOC103313160"]
[728,"NC_007420.3",10278393,"SNV","A","G","Homozygous",30,30,100,1,9,22,0.29,36.47,31,31,14,18,null,1,1,"no","G/G","No",1,110.19,"XP_008193882.1:c.[866A>G]; XP_015835803.1:c.[866A>G]; XP_015835804.1:c.[866A>G]","XP_008193882.1:p.[Asp289Gly]; XP_015835803.1:p.[Asp289Gly]; XP_015835804.1:p.[Asp289Gly]","LOC663311",663311,null,"663311 [Gene Symbol: LOC663311] [Locus Tag: TcasGA2_TC014424] [Chromosome: LG5] [Map Location: ] [Description: regulating synaptic membrane exocytosis protein 2] [Gene Type: protein-coding]","LOC663311; TcasGA2_TC014424"]
[729,"NC_007420.3",10314258,"SNV","A","G","Homozygous",26,26,100,1,24,4,0.14,38.23,28,28,10,21,null,1,1,"no","G/G","No",1,98.14,"XP_974527.1:c.899T>C","XP_974527.1:p.Val300Ala","LOC663383",663383,null,"663383 [Gene Symbol: LOC663383] [Locus Tag: TcasGA2_TC013377] [Chromosome: LG5] [Map Location: ] [Description: exostosin-3] [Gene Type: protein-coding]","LOC663383; TcasGA2_TC013377"]
[730,"NC_007420.3",10314330,"SNV","T","C","Homozygous",21,21,100,1,20,10,0.33,35.86,30,30,6,17,null,1,1,"no","C/C","No",1,83.12,"XP_974527.1:c.827A>G","XP_974527.1:p.Gln276Arg","LOC663383",663383,null,"663383 [Gene Symbol: LOC663383] [Locus Tag: TcasGA2_TC013377] [Chromosome: LG5] [Map Location: ] [Description: exostosin-3] [Gene Type: protein-coding]","LOC663383; TcasGA2_TC013377"]
[731,"NC_007420.3",10414738,"SNV","G","A","Homozygous",24,24,100,1,15,12,0.44,38.58,27,27,13,15,null,1,1,"no","A/A","No",1,93.72,"XP_008193873.1:c.56C>T","XP_008193873.1:p.Pro19Leu","LOC103313148",103313148,null,"103313148 [Gene Symbol: LOC103313148] [Locus Tag: TcasGA2_TC013371] [Chromosome: LG5] [Map Location: ] [Description: jmjC domain-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC013371; LOC103313148"]
[732,"NC_007420.3",10454847,"SNV","A","G","Homozygous",19,21,90.48,1,14,8,0.36,38.26,22,24,10,13,null,1,1,"no","G/G","No",1,23.43,"XP_015835799.1:c.[6570+125A>G]; XP_015835798.1:c.[6484A>G]; XP_015835800.1:c.[6402-338A>G]","XP_015835798.1:p.Ser2162Gly","LOC663619",663619,null,"663619 [Gene Symbol: LOC663619] [Locus Tag: TcasGA2_TC014438] [Chromosome: LG5] [Map Location: ] [Description: nucleoprotein TPR] [Gene Type: protein-coding]","LOC663619; TcasGA2_TC014438"]
[733,"NC_007420.3",10454853,"SNV","G","T","Heterozygous",5,22,22.73,0.94,1,5,0.17,38.6,6,24,2,4,0.16,0.01,0.36,"no","G/T","No",1,11.99,"XP_015835799.1:c.[6570+131G>T]; XP_015835800.1:c.[6402-332G>T]; XP_015835798.1:c.[6490G>T]","XP_015835798.1:p.Glu2164*","LOC663619",663619,null,"663619 [Gene Symbol: LOC663619] [Locus Tag: TcasGA2_TC014438] [Chromosome: LG5] [Map Location: ] [Description: nucleoprotein TPR] [Gene Type: protein-coding]","LOC663619; TcasGA2_TC014438"]
[734,"NC_007420.3",10454874,"SNV","G","C","Homozygous",20,20,100,1,14,7,0.33,37.35,21,21,10,14,null,1,1,"no","C/C","No",1,80.12,"XP_015835800.1:c.[6402-311G>C]; XP_015835799.1:c.[6570+152G>C]; XP_015835798.1:c.[6511G>C]","XP_015835798.1:p.Asp2171His","LOC663619",663619,null,"663619 [Gene Symbol: LOC663619] [Locus Tag: TcasGA2_TC014438] [Chromosome: LG5] [Map Location: ] [Description: nucleoprotein TPR] [Gene Type: protein-coding]","LOC663619; TcasGA2_TC014438"]
[735,"NC_007420.3",10455569,"SNV","T","A","Heterozygous",16,26,61.54,1,10,9,0.47,36.62,19,32,10,12,-1.53,0.92,1,"no","A/T","No",1,70.65,"XP_976459.1:c.426A>T","XP_976459.1:p.Arg142Ser","LOC663636",663636,null,"663636 [Gene Symbol: LOC663636] [Locus Tag: TcasGA2_TC013366] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663636] [Gene Type: protein-coding]","LOC663636; TcasGA2_TC013366"]
[736,"NC_007420.3",10455580,"SNV","A","G","Homozygous",33,35,94.29,1,17,19,0.47,38.82,36,38,19,22,null,0.99,1,"no","G/G","No",1,64.19,"XP_976459.1:c.415T>C","XP_976459.1:p.Ser139Pro","LOC663636",663636,null,"663636 [Gene Symbol: LOC663636] [Locus Tag: TcasGA2_TC013366] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663636] [Gene Type: protein-coding]","LOC663636; TcasGA2_TC013366"]
[737,"NC_007420.3",10455601,"SNV","T","C","Heterozygous",18,31,58.06,1,9,12,0.43,38.78,21,34,10,12,-0.22,0.69,1,"no","C/T","No",1,91.79,"XP_976459.1:c.394A>G","XP_976459.1:p.Ile132Val","LOC663636",663636,null,"663636 [Gene Symbol: LOC663636] [Locus Tag: TcasGA2_TC013366] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663636] [Gene Type: protein-coding]","LOC663636; TcasGA2_TC013366"]
[738,"NC_007420.3",10671888,"SNV","C","T","Homozygous",26,26,100,1,6,20,0.23,35.35,26,26,16,16,null,1,1,"no","T/T","No",1,99.75,"XP_015835806.1:c.298G>A","XP_015835806.1:p.Ala100Thr","LOC663878",663878,null,"663878 [Gene Symbol: LOC663878] [Locus Tag: TcasGA2_TC013351] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663878] [Gene Type: protein-coding]","LOC663878; TcasGA2_TC013351"]
[739,"NC_007420.3",10673050,"SNV","C","A","Homozygous",20,20,100,1,10,12,0.45,36.35,22,22,12,12,null,1,1,"no","A/A","No",1,81.69,"XP_008193897.1:c.1884G>T","XP_008193897.1:p.Lys628Asn","LOC103313157",103313157,null,"103313157 [Gene Symbol: LOC103313157] [Locus Tag: TcasGA2_TC013350] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein DZIP1L] [Gene Type: protein-coding]","TcasGA2_TC013350; LOC103313157"]
[740,"NC_007420.3",10673463,"SNV","T","A","Homozygous",20,20,100,1,17,5,0.23,38.45,22,22,13,13,null,1,1,"no","A/A","No",1,81.69,"XP_008193897.1:c.1516A>T","XP_008193897.1:p.Met506Leu","LOC103313157",103313157,null,"103313157 [Gene Symbol: LOC103313157] [Locus Tag: TcasGA2_TC013350] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein DZIP1L] [Gene Type: protein-coding]","TcasGA2_TC013350; LOC103313157"]
[741,"NC_007420.3","10673535..10673536","MNV","TA","CC","Homozygous",20,20,100,1,11,13,0.46,38.2,24,24,18,17,null,1,1,"no","CC/CC","No",1,200,"XP_008193897.1:c.1443_1444delTAinsGG","XP_008193897.1:p.Asn481_Ile482delinsLysVal","LOC103313157",103313157,null,"103313157 [Gene Symbol: LOC103313157] [Locus Tag: TcasGA2_TC013350] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein DZIP1L] [Gene Type: protein-coding]","TcasGA2_TC013350; LOC103313157"]
[742,"NC_007420.3",10692654,"SNV","G","A","Homozygous",21,21,100,1,14,10,0.42,36.86,24,24,13,16,null,1,1,"no","A/A","No",1,84.7,"XP_008193900.1:c.2447C>T","XP_008193900.1:p.Ala816Val","LOC663972",663972,null,"663972 [Gene Symbol: LOC663972] [Locus Tag: TcasGA2_TC013347] [Chromosome: LG5] [Map Location: ] [Description: DNA repair protein complementing XP-G cells homolog] [Gene Type: protein-coding]","TcasGA2_TC013347; LOC663972"]
[743,"NC_007420.3",10693592,"SNV","T","C","Homozygous",25,25,100,1,7,19,0.27,38.12,26,26,11,13,null,1,1,"no","C/C","No",1,95.16,"XP_008193900.1:c.1561A>G","XP_008193900.1:p.Ile521Val","LOC663972",663972,null,"663972 [Gene Symbol: LOC663972] [Locus Tag: TcasGA2_TC013347] [Chromosome: LG5] [Map Location: ] [Description: DNA repair protein complementing XP-G cells homolog] [Gene Type: protein-coding]","TcasGA2_TC013347; LOC663972"]
[744,"NC_007420.3",10693594,"SNV","G","A","Homozygous",22,22,100,1,7,16,0.3,38.32,23,23,10,11,null,1,1,"no","A/A","No",1,87.71,"XP_008193900.1:c.1559C>T","XP_008193900.1:p.Ser520Phe","LOC663972",663972,null,"663972 [Gene Symbol: LOC663972] [Locus Tag: TcasGA2_TC013347] [Chromosome: LG5] [Map Location: ] [Description: DNA repair protein complementing XP-G cells homolog] [Gene Type: protein-coding]","TcasGA2_TC013347; LOC663972"]
[745,"NC_007420.3",10693634,"SNV","C","T","Homozygous",27,27,100,1,11,16,0.41,39.52,27,27,14,16,null,1,1,"no","T/T","No",1,102.75,"XP_008193900.1:c.1519G>A","XP_008193900.1:p.Glu507Lys","LOC663972",663972,null,"663972 [Gene Symbol: LOC663972] [Locus Tag: TcasGA2_TC013347] [Chromosome: LG5] [Map Location: ] [Description: DNA repair protein complementing XP-G cells homolog] [Gene Type: protein-coding]","TcasGA2_TC013347; LOC663972"]
[746,"NC_007420.3",10920804,"SNV","C","T","Homozygous",20,20,100,1,5,16,0.24,37.75,21,21,11,11,null,1,1,"no","T/T","No",1,81.7,"XP_966996.1:c.40G>A","XP_966996.1:p.Val14Ile","LOC655363",655363,null,"655363 [Gene Symbol: LOC655363] [Locus Tag: TcasGA2_TC013339] [Chromosome: LG5] [Map Location: ] [Description: EGF domain-specific O-linked N-acetylglucosamine transferase] [Gene Type: protein-coding]","TcasGA2_TC013339; LOC655363"]
[747,"NC_007420.3",11080395,"SNV","A","C","Homozygous",21,21,100,1,4,20,0.17,37.71,24,24,11,12,null,1,1,"no","C/C","No",1,83.13,"XP_008193918.1:c.[401A>C]; XP_015835845.1:c.[390+11A>C]","XP_008193918.1:p.Gln134Pro","LOC656765, LOC656853","656765 , 656853",null,"656765 [Gene Symbol: LOC656765] [Locus Tag: TcasGA2_TC014486] [Chromosome: LG5] [Map Location: ] [Description: general odorant-binding protein 69a] [Gene Type: protein-coding] || 656853 [Gene Symbol: LOC656853] [Locus Tag: TcasGA2_TC013322] [Chromosome: LG5] [Map Location: ] [Description: general odorant-binding protein 83a] [Gene Type: protein-coding]","LOC656765; TcasGA2_TC014486; OBP08 || OBP06; TcasGA2_TC013322; OBP07; LOC656853"]
[748,"NC_007420.3",11080424,"Deletion","T","-","Homozygous",22,22,100,1,2,22,0.08,39.23,24,24,11,13,null,1,1,"no","-/-","No",1,96.73,"XP_015835845.1:c.[391-10delT]; XP_008193918.1:c.[430delT]","XP_008193918.1:p.Ser146fs","LOC656765, LOC656853","656765 , 656853",null,"656765 [Gene Symbol: LOC656765] [Locus Tag: TcasGA2_TC014486] [Chromosome: LG5] [Map Location: ] [Description: general odorant-binding protein 69a] [Gene Type: protein-coding] || 656853 [Gene Symbol: LOC656853] [Locus Tag: TcasGA2_TC013322] [Chromosome: LG5] [Map Location: ] [Description: general odorant-binding protein 83a] [Gene Type: protein-coding]","LOC656765; TcasGA2_TC014486; OBP08 || OBP06; TcasGA2_TC013322; OBP07; LOC656853"]
[749,"NC_007420.3",11159717,"SNV","A","G","Homozygous",23,23,100,1,12,12,0.5,36.04,24,24,14,18,null,1,1,"no","G/G","No",1,89.12,"XP_015835632.1:c.4921A>G","XP_015835632.1:p.Ser1641Gly","LOC657413",657413,null,"657413 [Gene Symbol: LOC657413] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: hydrocephalus-inducing protein-like] [Gene Type: protein-coding]","LOC657413"]
[750,"NC_007420.3",11184778,"SNV","T","G","Homozygous",21,21,100,1,16,5,0.24,37.62,21,21,12,18,null,1,1,"no","G/G","No",1,83.09,"XP_015835756.1:c.[3993T>G]; XP_008193949.1:c.[3993T>G]; XP_015835757.1:c.[3993T>G]","XP_015835756.1:p.[Asp1331Glu]; XP_008193949.1:p.[Asp1331Glu]; XP_015835757.1:p.[Asp1331Glu]","LOC103313173",103313173,null,"103313173 [Gene Symbol: LOC103313173] [Locus Tag: TcasGA2_TC014491] [Chromosome: LG5] [Map Location: ] [Description: LRR receptor-like serine/threonine-protein kinase GSO2] [Gene Type: protein-coding]","LOC103313173; TcasGA2_TC014491"]
[751,"NC_007420.3",11309079,"SNV","G","A","Homozygous",22,22,100,1,17,5,0.23,37.86,22,22,9,17,null,1,1,"no","A/A","No",1,87.71,"XP_015836106.1:c.[112G>A]; XP_015836104.1:c.[112G>A]; XP_015836107.1:c.[112G>A]; XP_015836102.1:c.[112G>A]; XP_015836103.1:c.[112G>A]; XP_015836105.1:c.[112G>A]","XP_015836106.1:p.[Glu38Lys]; XP_015836104.1:p.[Glu38Lys]; XP_015836107.1:p.[Glu38Lys]; XP_015836102.1:p.[Glu38Lys]; XP_015836103.1:p.[Glu38Lys]; XP_015836105.1:p.[Glu38Lys]","LOC107398017",107398017,null,"107398017 [Gene Symbol: LOC107398017] [Locus Tag: TcasGA2_TC014504] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC107398017; TcasGA2_TC014504"]
[752,"NC_007420.3",11505121,"SNV","T","C","Homozygous",20,20,100,1,12,14,0.46,37.65,26,26,12,12,null,1,1,"no","C/C","No",1,80.11,"XP_015835634.1:c.6314T>C","XP_015835634.1:p.Leu2105Ser","LOC655574",655574,null,"655574 [Gene Symbol: LOC655574] [Locus Tag: TcasGA2_TC014546] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized protein PFB0145c] [Gene Type: protein-coding]","TcasGA2_TC014546; LOC655574"]
[753,"NC_007420.3",11556114,"SNV","G","T","Homozygous",20,20,100,1,14,7,0.33,37.55,21,21,10,13,null,1,1,"no","T/T","No",1,81.7,"XP_008193991.1:c.[469C>A]; XP_008193990.1:c.[469C>A]","XP_008193991.1:p.[Leu157Met]; XP_008193990.1:p.[Leu157Met]","LOC100141626",100141626,null,"100141626 [Gene Symbol: LOC100141626] [Locus Tag: TcasGA2_TC013249] [Chromosome: LG5] [Map Location: ] [Description: putative transferase CAF17 homolog, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC013249; LOC100141626"]
[754,"NC_007420.3",11912174,"SNV","G","A","Homozygous",27,27,100,1,8,19,0.3,36,27,27,12,18,null,1,1,"no","A/A","No",1,102.74,"XP_008194015.1:c.1467G>A","XP_008194015.1:p.Met489Ile","LOC103313192",103313192,null,"103313192 [Gene Symbol: LOC103313192] [Locus Tag: TcasGA2_TC014573] [Chromosome: LG5] [Map Location: ] [Description: cGMP-dependent protein kinase, isozyme 1] [Gene Type: protein-coding]","TcasGA2_TC014573; LOC103313192"]
[755,"NC_007420.3",12089142,"SNV","T","C","Homozygous",20,20,100,1,8,17,0.32,35.85,25,25,8,15,null,1,1,"no","C/C","No",1,77.11,"XP_969335.1:c.728T>C","XP_969335.1:p.Val243Ala","LOC657807",657807,null,"657807 [Gene Symbol: LOC657807] [Locus Tag: TcasGA2_TC014579] [Chromosome: LG5] [Map Location: ] [Description: cilia- and flagella-associated protein 20] [Gene Type: protein-coding]","LOC657807; TcasGA2_TC014579"]
[756,"NC_007420.3",12130761,"SNV","C","G","Homozygous",20,20,100,1,14,8,0.36,38.15,22,22,14,14,null,1,1,"no","G/G","No",1,80.09,"XP_008194030.2:c.2251G>C","XP_008194030.2:p.Gly751Arg","LOC100141837",100141837,null,"100141837 [Gene Symbol: LOC100141837] [Locus Tag: TcasGA2_TC013215] [Chromosome: LG5] [Map Location: ] [Description: neprilysin-2] [Gene Type: protein-coding]","TcasGA2_TC013215; LOC100141837"]
[757,"NC_007420.3",12131601,"Deletion","G","-","Homozygous",25,25,100,1,13,13,0.5,38,26,26,12,15,null,1,1,"no","-/-","No",1,102.8,"XP_008194030.2:c.1501delC","XP_008194030.2:p.Leu501fs","LOC100141837",100141837,null,"100141837 [Gene Symbol: LOC100141837] [Locus Tag: TcasGA2_TC013215] [Chromosome: LG5] [Map Location: ] [Description: neprilysin-2] [Gene Type: protein-coding]","TcasGA2_TC013215; LOC100141837"]
[758,"NC_007420.3",12140480,"SNV","G","A","Homozygous",20,20,100,1,9,14,0.39,36.25,23,23,13,14,null,1,1,"no","A/A","No",1,81.69,"XP_008194036.1:c.145G>A","XP_008194036.1:p.Val49Ile","LOC103313197",103313197,null,"103313197 [Gene Symbol: LOC103313197] [Locus Tag: TcasGA2_TC014587] [Chromosome: LG5] [Map Location: ] [Description: secernin-3] [Gene Type: protein-coding]","TcasGA2_TC014587; LOC103313197"]
[759,"NC_007420.3",12207859,"SNV","G","A","Homozygous",21,21,100,1,13,10,0.43,38.71,23,23,12,11,null,1,1,"no","A/A","No",1,84.7,"XP_015836183.1:c.1187G>A","XP_015836183.1:p.Gly396Glu","LOC655129",655129,null,"655129 [Gene Symbol: LOC655129] [Locus Tag: TcasGA2_TC014596] [Chromosome: LG5] [Map Location: ] [Description: leucine-rich repeat-containing protein 34] [Gene Type: protein-coding]","TcasGA2_TC014596; LOC655129"]
[760,"NC_007420.3",12277181,"SNV","A","G","Homozygous",29,29,100,1,24,8,0.25,37.76,32,32,15,18,null,1,1,"no","G/G","No",1,107.18,"XP_008194222.1:c.238A>G","XP_008194222.1:p.Thr80Ala","LOC103313237",103313237,null,"103313237 [Gene Symbol: LOC103313237] [Locus Tag: TcasGA2_TC014602] [Chromosome: LG5] [Map Location: ] [Description: golgin subfamily A member 2] [Gene Type: protein-coding]","LOC103313237; TcasGA2_TC014602"]
[761,"NC_007420.3",12277358,"SNV","C","A","Homozygous",28,28,100,1,12,19,0.39,37.54,31,31,15,16,null,1,1,"no","A/A","No",1,105.76,"XP_008194222.1:c.415C>A","XP_008194222.1:p.Arg139Ser","LOC103313237",103313237,null,"103313237 [Gene Symbol: LOC103313237] [Locus Tag: TcasGA2_TC014602] [Chromosome: LG5] [Map Location: ] [Description: golgin subfamily A member 2] [Gene Type: protein-coding]","LOC103313237; TcasGA2_TC014602"]
[762,"NC_007420.3",12281746,"SNV","G","T","Homozygous",28,28,100,1,18,14,0.44,38.11,32,32,11,16,null,1,1,"no","T/T","No",1,105.76,"XP_001809587.2:c.1144C>A","XP_001809587.2:p.Pro382Thr","LOC100141811",100141811,null,"100141811 [Gene Symbol: LOC100141811] [Locus Tag: TcasGA2_TC013210] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein 2 homolog] [Gene Type: protein-coding]","LOC100141811; TcasGA2_TC013210"]
[763,"NC_007420.3",12506440,"SNV","A","G","Homozygous",21,21,100,1,15,10,0.4,36.38,25,25,10,18,null,1,1,"no","G/G","No",1,83.1,"XP_015836040.1:c.[979A>G]; XP_969407.1:c.[826A>G]; XP_008194248.1:c.[826A>G]; XP_015836041.1:c.[826A>G]; XP_008194247.1:c.[979A>G]; XP_008194246.1:c.[979A>G]; XP_008194249.1:c.[826A>G]","XP_015836040.1:p.[Ser327Gly]; XP_969407.1:p.[Ser276Gly]; XP_008194248.1:p.[Ser276Gly]; XP_015836041.1:p.[Ser276Gly]; XP_008194247.1:p.[Ser327Gly]; XP_008194246.1:p.[Ser327Gly]; XP_008194249.1:p.[Ser276Gly]","LOC657653, LOC657885","657653 , 657885",null,"657653 [Gene Symbol: LOC657653] [Locus Tag: TcasGA2_TC013195] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC657653] [Gene Type: protein-coding] || 657885 [Gene Symbol: LOC657885] [Locus Tag: TcasGA2_TC014620] [Chromosome: LG5] [Map Location: ] [Description: anoctamin-10] [Gene Type: protein-coding]","LOC657653; TcasGA2_TC013195 || LOC657885; Axs; TcasGA2_TC014620"]
[764,"NC_007420.3",12556133,"SNV","G","A","Homozygous",26,26,100,1,20,9,0.31,37.85,29,29,12,16,null,1,1,"no","A/A","No",1,99.74,"XP_969911.1:c.[4628G>A]; XP_008194255.1:c.[4637G>A]","XP_969911.1:p.[Ser1543Asn]; XP_008194255.1:p.[Ser1546Asn]","LOC658430",658430,null,"658430 [Gene Symbol: LOC658430] [Locus Tag: TcasGA2_TC014624] [Chromosome: LG5] [Map Location: ] [Description: death-inducer obliterator 1] [Gene Type: protein-coding]","LOC658430; TcasGA2_TC014624"]
[765,"NC_007420.3",12593536,"SNV","T","C","Heterozygous",5,22,22.73,0.98,2,3,0.4,38.2,5,22,4,4,0.71,0.19,1,"no","C/T","No",1,16.44,"XP_008194264.1:c.1325A>G","XP_008194264.1:p.Asn442Ser","LOC659014",659014,null,"659014 [Gene Symbol: LOC659014] [Locus Tag: TcasGA2_TC013188] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC659014; TcasGA2_TC013188"]
[766,"NC_007420.3",12593542,"SNV","T","A","Heterozygous",5,22,22.73,0.97,2,3,0.4,39,5,22,4,4,1.06,0.54,1,"no","A/T","No",1,15.16,"XP_008194264.1:c.1319A>T","XP_008194264.1:p.Asn440Ile","LOC659014",659014,null,"659014 [Gene Symbol: LOC659014] [Locus Tag: TcasGA2_TC013188] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC659014; TcasGA2_TC013188"]
[767,"NC_007420.3",12642985,"SNV","C","T","Heterozygous",18,26,69.23,1,7,11,0.39,37.89,18,28,8,9,-1.03,0.93,0.81,"no","C/T","No",1,43.52,"XP_015835746.1:c.[361C>T]; XP_015835745.1:c.[361C>T]","XP_015835746.1:p.[Gln121*]; XP_015835745.1:p.[Gln121*]","LOC107397971",107397971,null,"107397971 [Gene Symbol: LOC107397971] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC107397971] [Gene Type: protein-coding]","LOC107397971"]
[768,"NC_007420.3",12643075,"SNV","T","C","Homozygous",21,21,100,1,8,13,0.38,37.48,21,21,10,14,null,1,1,"no","C/C","No",1,83.13,"XP_015835746.1:c.[451T>C]; XP_015835745.1:c.[451T>C]","XP_015835746.1:p.[Ser151Pro]; XP_015835745.1:p.[Ser151Pro]","LOC107397971",107397971,null,"107397971 [Gene Symbol: LOC107397971] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC107397971] [Gene Type: protein-coding]","LOC107397971"]
[769,"NC_007420.3",12687286,"SNV","C","T","Homozygous",27,27,100,1,17,12,0.41,36.22,29,29,15,19,null,1,1,"no","T/T","No",1,102.75,"XP_008194279.1:c.1903C>T","XP_008194279.1:p.Pro635Ser","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[770,"NC_007420.3",12688171,"SNV","C","T","Heterozygous",6,22,27.27,1,1,6,0.14,37.83,7,24,4,5,0.66,1,1,"no","C/T","No",1,27.97,"XP_008194279.1:c.2696C>T","XP_008194279.1:p.Pro899Leu","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[771,"NC_007420.3",12688677,"SNV","C","G","Heterozygous",9,22,40.91,1,8,2,0.2,37.78,10,24,5,7,0.6,0.25,0.94,"no","C/G","No",1,66.13,"XP_008194279.1:c.3202C>G","XP_008194279.1:p.Pro1068Ala","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[772,"NC_007420.3",12688738,"SNV","C","T","Heterozygous",14,22,63.64,1,6,11,0.35,36.64,17,26,8,10,-1.13,0.94,1,"no","C/T","No",1,54.63,"XP_008194279.1:c.3263C>T","XP_008194279.1:p.Pro1088Leu","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[773,"NC_007420.3",12703961,"SNV","C","T","Homozygous",20,20,100,1,7,16,0.3,38.65,23,23,11,12,null,1,1,"no","T/T","No",1,81.69,"XP_008194283.1:c.[1015G>A]; XP_001812538.1:c.[1015G>A]; XP_008194282.1:c.[1015G>A]","XP_008194283.1:p.[Ala339Thr]; XP_001812538.1:p.[Ala339Thr]; XP_008194282.1:p.[Ala339Thr]","LOC100142152",100142152,null,"100142152 [Gene Symbol: LOC100142152] [Locus Tag: TcasGA2_TC030773] [Chromosome: LG5] [Map Location: ] [Description: nucleolin 1] [Gene Type: protein-coding]","LOC100142152; TcasGA2_TC030773"]
[774,"NC_007420.3",12711791,"SNV","T","C","Homozygous",22,22,100,1,16,8,0.33,38.18,24,24,12,15,null,1,1,"no","C/C","No",1,86.13,"XP_008194285.1:c.1133T>C","XP_008194285.1:p.Val378Ala","LOC100141738",100141738,null,"100141738 [Gene Symbol: LOC100141738] [Locus Tag: TcasGA2_TC014639] [Chromosome: LG5] [Map Location: ] [Description: transmembrane protein 26] [Gene Type: protein-coding]","LOC100141738; TcasGA2_TC014639"]
[775,"NC_007420.3","12711826..12711834","Deletion","AAGAAACTG","-","Homozygous",25,26,96.15,1,19,8,0.3,37.24,27,28,15,20,null,1,1,"no","-/-","No",1,200,"XP_008194285.1:c.1168_1176delAAGAAACTG","XP_008194285.1:p.Lys394_Lys396del","LOC100141738",100141738,null,"100141738 [Gene Symbol: LOC100141738] [Locus Tag: TcasGA2_TC014639] [Chromosome: LG5] [Map Location: ] [Description: transmembrane protein 26] [Gene Type: protein-coding]","LOC100141738; TcasGA2_TC014639"]
[776,"NC_007420.3",13095112,"SNV","T","C","Homozygous",21,22,95.45,1,5,16,0.24,38.67,21,23,12,14,null,1,1,"no","C/C","No",1,59.29,"XP_008194313.1:c.[121T>C]; XP_015836010.1:c.[73T>C]","XP_008194313.1:p.[Phe41Leu]; XP_015836010.1:p.[Phe25Leu]","LOC660991",660991,null,"660991 [Gene Symbol: LOC660991] [Locus Tag: TcasGA2_TC014658] [Chromosome: LG5] [Map Location: ] [Description: insulin-like growth factor-binding protein complex acid labile subunit] [Gene Type: protein-coding]","LOC660991; TcasGA2_TC014658"]
[777,"NC_007420.3",13187574,"SNV","T","A","Homozygous",20,20,100,1,10,14,0.42,36.8,24,24,11,13,null,1,1,"no","A/A","No",1,81.69,"XP_001814012.1:c.1414A>T","XP_001814012.1:p.Thr472Ser","LOC661929",661929,null,"661929 [Gene Symbol: LOC661929] [Locus Tag: TcasGA2_TC013148] [Chromosome: LG5] [Map Location: ] [Description: PNR-like protein] [Gene Type: protein-coding]","PNR; LOC661929; NR2E6; TcasGA2_TC013148; NR2E3; PNR-like"]
[778,"NC_007420.3",13518822,"SNV","A","T","Homozygous",21,21,100,1,14,11,0.44,37.05,25,25,12,14,null,1,1,"no","T/T","No",1,84.71,"XP_001814936.2:c.629A>T","XP_001814936.2:p.Tyr210Phe","LOC100141883",100141883,null,"100141883 [Gene Symbol: LOC100141883] [Locus Tag: TcasGA2_TC014698] [Chromosome: LG5] [Map Location: ] [Description: multiple epidermal growth factor-like domains protein 8] [Gene Type: protein-coding]","TcasGA2_TC014698; LOC100141883"]
[779,"NC_007420.3",13553798,"SNV","C","G","Homozygous",21,21,100,1,11,11,0.5,37.95,22,22,13,16,null,1,1,"no","G/G","No",1,83.1,"XP_974542.2:c.466C>G","XP_974542.2:p.Leu156Val","LOC663402",663402,null,"663402 [Gene Symbol: LOC663402] [Locus Tag: TcasGA2_TC014700] [Chromosome: LG5] [Map Location: ] [Description: membrane metallo-endopeptidase-like 1] [Gene Type: protein-coding]","TcasGA2_TC014700; LOC663402"]
[780,"NC_007420.3",13641050,"SNV","A","G","Homozygous",21,21,100,1,11,13,0.46,38.67,24,24,11,15,null,1,1,"no","G/G","No",1,83.1,"XP_008194357.1:c.1628T>C","XP_008194357.1:p.Met543Thr","LOC103313274",103313274,null,"103313274 [Gene Symbol: LOC103313274] [Locus Tag: TcasGA2_TC013109] [Chromosome: LG5] [Map Location: ] [Description: putative ATP-dependent RNA helicase DHX33] [Gene Type: protein-coding]","LOC103313274; TcasGA2_TC013109"]
[781,"NC_007420.3",13781424,"SNV","G","A","Homozygous",20,20,100,1,10,13,0.43,36.3,23,23,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_008194370.1:c.113G>A","XP_008194370.1:p.Gly38Asp","LOC663690",663690,null,"663690 [Gene Symbol: LOC663690] [Locus Tag: TcasGA2_TC033237] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC663690; TcasGA2_TC033237"]
[782,"NC_007420.3",13785311,"SNV","C","A","Homozygous",22,22,100,1,17,5,0.23,39.18,22,22,13,16,null,1,1,"no","A/A","No",1,87.7,"XP_974830.1:c.346C>A","XP_974830.1:p.His116Asn","LOC663702",663702,null,"663702 [Gene Symbol: LOC663702] [Locus Tag: TcasGA2_TC014714] [Chromosome: LG5] [Map Location: ] [Description: maf-like protein CLL_A0561] [Gene Type: protein-coding]","TcasGA2_TC014714; LOC663702"]
[783,"NC_007420.3",13810895,"SNV","C","A","Homozygous",20,20,100,1,17,4,0.19,37.55,21,21,12,15,null,1,1,"no","A/A","No",1,81.69,"XP_008194372.1:c.1600C>A","XP_008194372.1:p.His534Asn","LOC103313276",103313276,null,"103313276 [Gene Symbol: LOC103313276] [Locus Tag: TcasGA2_TC014717] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313276; TcasGA2_TC014717"]
[784,"NC_007420.3",13819016,"SNV","G","C","Homozygous",23,23,100,1,19,6,0.24,39.3,25,25,12,18,null,1,1,"no","C/C","No",1,89.14,"XP_008194375.1:c.[2942C>G]; XP_008194385.1:c.[2504C>G]; XP_008194387.1:c.[2420C>G]; XP_015835915.1:c.[2897C>G]; XP_008194382.1:c.[2651C>G]; XP_008194383.1:c.[2856+165C>G]; XP_008194377.1:c.[2942C>G]; XP_008194376.1:c.[2942C>G]; XP_008194380.1:c.[2720C>G]; XP_008194378.1:c.[2750C>G]; XP_008194386.1:c.[2474C>G]; XP_008194379.1:c.[2942C>G]; XP_008194381.1:c.[2696C>G]; XP_015835916.1:c.[2606C>G]; XP_008194384.1:c.[2507C>G]","XP_008194375.1:p.[Thr981Ser]; XP_008194385.1:p.[Thr835Ser]; XP_008194387.1:p.[Thr807Ser]; XP_015835915.1:p.[Thr966Ser]; XP_008194382.1:p.[Thr884Ser]; XP_008194377.1:p.[Thr981Ser]; XP_008194376.1:p.[Thr981Ser]; XP_008194380.1:p.[Thr907Ser]; XP_008194378.1:p.[Thr917Ser]; XP_008194386.1:p.[Thr825Ser]; XP_008194379.1:p.[Thr981Ser]; XP_008194381.1:p.[Thr899Ser]; XP_015835916.1:p.[Thr869Ser]; XP_008194384.1:p.[Thr836Ser]","LOC663789",663789,null,"663789 [Gene Symbol: LOC663789] [Locus Tag: TcasGA2_TC033238] [Chromosome: LG5] [Map Location: ] [Description: tensin] [Gene Type: protein-coding]","TcasGA2_TC033238; LOC663789"]
[785,"NC_007420.3",13907678,"SNV","T","A","Homozygous",25,25,100,1,13,13,0.5,37.4,26,26,12,16,null,1,1,"no","A/A","No",1,96.73,"XP_015835918.1:c.[913A>T]; XP_008194390.1:c.[905-497A>T]; XP_008194388.1:c.[905-497A>T]; XP_008194391.1:c.[905-497A>T]; XP_008194389.1:c.[905-497A>T]; XP_974947.2:c.[905-497A>T]","XP_015835918.1:p.Thr305Ser","LOC663820",663820,null,"663820 [Gene Symbol: LOC663820] [Locus Tag: TcasGA2_TC033240] [Chromosome: LG5] [Map Location: ] [Description: protein abrupt] [Gene Type: protein-coding]","LOC663820; TcasGA2_TC033240"]
[786,"NC_007420.3",14107299,"SNV","C","T","Heterozygous",16,26,61.54,1,8,14,0.36,38.12,22,32,8,7,0.26,0.34,0.92,"no","C/T","No",1,68.93,"XP_015835641.1:c.1654G>A","XP_015835641.1:p.Val552Ile","LOC103313280",103313280,null,"103313280 [Gene Symbol: LOC103313280] [Locus Tag: TcasGA2_TC033244] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313280] [Gene Type: protein-coding]","LOC103313280; TcasGA2_TC033244"]
[787,"NC_007420.3",14108284,"SNV","T","C","Homozygous",20,20,100,1,15,5,0.25,37.35,20,20,14,16,null,1,1,"no","C/C","No",1,80.12,"XP_015835641.1:c.892A>G","XP_015835641.1:p.Ser298Gly","LOC103313280",103313280,null,"103313280 [Gene Symbol: LOC103313280] [Locus Tag: TcasGA2_TC033244] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313280] [Gene Type: protein-coding]","LOC103313280; TcasGA2_TC033244"]
[788,"NC_007420.3",14130396,"SNV","G","T","Homozygous",20,20,100,1,5,15,0.25,38.7,20,20,11,13,null,1,1,"no","T/T","No",1,81.69,"XP_975053.1:c.694G>T","XP_975053.1:p.Val232Leu","LOC663932",663932,null,"663932 [Gene Symbol: LOC663932] [Locus Tag: TcasGA2_TC014727] [Chromosome: LG5] [Map Location: ] [Description: venom dipeptidyl peptidase 4] [Gene Type: protein-coding]","TcasGA2_TC014727; LOC663932"]
[789,"NC_007420.3",14130784,"SNV","G","A","Homozygous",21,23,91.3,1,9,12,0.43,39.1,21,24,11,12,null,1,1,"no","A/A","No",1,27.26,"XP_975053.1:c.1082G>A","XP_975053.1:p.Gly361Glu","LOC663932",663932,null,"663932 [Gene Symbol: LOC663932] [Locus Tag: TcasGA2_TC014727] [Chromosome: LG5] [Map Location: ] [Description: venom dipeptidyl peptidase 4] [Gene Type: protein-coding]","TcasGA2_TC014727; LOC663932"]
[790,"NC_007420.3",14260070,"SNV","A","G","Homozygous",21,24,87.5,0.97,14,12,0.46,37.05,26,29,14,17,null,0.92,1,"no","G/G","No",1,15.78,"XP_975187.1:c.589T>C","XP_975187.1:p.Ser197Pro","LOC664077",664077,null,"664077 [Gene Symbol: LOC664077] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: transcription factor HES-1-like] [Gene Type: protein-coding]","LOC664077"]
[791,"NC_007420.3",14286030,"SNV","C","G","Homozygous",22,22,100,1,15,7,0.32,37.45,22,22,16,13,null,1,1,"no","G/G","No",1,86.1,"XP_015835750.1:c.[2529C>G]; XP_008194424.1:c.[2064+1000C>G]; XP_015835749.1:c.[2574C>G]; XP_008194423.1:c.[2097+1000C>G]; XP_008194420.1:c.[2109+1000C>G]","XP_015835750.1:p.[His843Gln]; XP_015835749.1:p.[His858Gln]","LOC664095",664095,null,"664095 [Gene Symbol: LOC664095] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: tyrosine-protein kinase PR2] [Gene Type: protein-coding]","LOC664095"]
[792,"NC_007420.3",14296560,"SNV","T","A","Homozygous",25,25,100,1,18,7,0.28,37.28,25,25,12,21,null,1,1,"no","A/A","No",1,96.74,"XP_975229.1:c.779A>T","XP_975229.1:p.His260Leu","LOC664121",664121,null,"664121 [Gene Symbol: LOC664121] [Locus Tag: TcasGA2_TC013076] [Chromosome: LG5] [Map Location: ] [Description: origin recognition complex subunit 3] [Gene Type: protein-coding]","LOC664121; TcasGA2_TC013076"]
[793,"NC_007420.3",14660961,"SNV","A","T","Heterozygous",7,28,25,1,5,4,0.44,38.29,9,33,5,6,1.51,0.34,1,"no","A/T","No",1,26.76,"XP_008194045.1:c.1882T>A","XP_008194045.1:p.Ser628Thr","LOC655279",655279,null,"655279 [Gene Symbol: LOC655279] [Locus Tag: TcasGA2_TC013060] [Chromosome: LG5] [Map Location: ] [Description: kinesin 6A] [Gene Type: protein-coding]","TcasGA2_TC013060; kinesin-6A; LOC655279"]
[794,"NC_007420.3",14831815,"SNV","C","A","Homozygous",22,22,100,1,10,15,0.4,38.09,25,25,9,12,null,1,1,"no","A/A","No",1,87.7,"XP_015836119.1:c.[1704C>A]; XP_008194079.1:c.[1704C>A]; XP_015836117.1:c.[1701C>A]; XP_008194080.1:c.[1698C>A]","XP_015836119.1:p.[Asp568Glu]; XP_008194079.1:p.[Asp568Glu]; XP_015836117.1:p.[Asp567Glu]; XP_008194080.1:p.[Asp566Glu]","LOC657573",657573,null,"657573 [Gene Symbol: LOC657573] [Locus Tag: TcasGA2_TC014768] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC657573] [Gene Type: protein-coding]","LOC657573; TcasGA2_TC014768"]
[795,"NC_007420.3",14837072,"SNV","A","G","Heterozygous",12,22,54.55,1,2,10,0.17,38.17,12,22,8,8,-0.92,0.83,0.49,"no","A/G","No",1,78.87,"XP_008194079.1:c.[6281A>G]; XP_015836119.1:c.[6281A>G]; XP_015836117.1:c.[6278A>G]; XP_008194080.1:c.[6275A>G]","XP_008194079.1:p.[Lys2094Arg]; XP_015836119.1:p.[Lys2094Arg]; XP_015836117.1:p.[Lys2093Arg]; XP_008194080.1:p.[Lys2092Arg]","LOC657573",657573,null,"657573 [Gene Symbol: LOC657573] [Locus Tag: TcasGA2_TC014768] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC657573] [Gene Type: protein-coding]","LOC657573; TcasGA2_TC014768"]
[796,"NC_007420.3",15143139,"SNV","G","C","Homozygous",27,27,100,1,11,22,0.33,36.93,33,33,10,13,null,1,1,"no","C/C","No",1,101.17,"XP_008194133.1:c.[2737G>C]; XP_008194131.1:c.[2752G>C]; XP_015835668.1:c.[2737G>C]; XP_008194135.1:c.[2722G>C]; XP_008194132.1:c.[2752G>C]","XP_008194133.1:p.[Glu913Gln]; XP_008194131.1:p.[Glu918Gln]; XP_015835668.1:p.[Glu913Gln]; XP_008194135.1:p.[Glu908Gln]; XP_008194132.1:p.[Glu918Gln]","LOC100142267",100142267,null,"100142267 [Gene Symbol: LOC100142267] [Locus Tag: TcasGA2_TC014794] [Chromosome: LG5] [Map Location: ] [Description: probable phosphorylase b kinase regulatory subunit beta] [Gene Type: protein-coding]","LOC100142267; TcasGA2_TC014794"]
[797,"NC_007421.3",540720,"SNV","C","G","Heterozygous",14,20,70,1,11,7,0.39,38,18,28,9,12,1.15,0.93,1,"no","C/G","No",1,33.2,"XP_015836205.1:c.[931C>G]; XP_008194491.1:c.[931C>G]; XP_008194493.1:c.[856C>G]","XP_015836205.1:p.[Pro311Ala]; XP_008194491.1:p.[Pro311Ala]; XP_008194493.1:p.[Pro286Ala]","LOC103313306",103313306,null,"103313306 [Gene Symbol: LOC103313306] [Locus Tag: TcasGA2_TC015411] [Chromosome: LG6] [Map Location: ] [Description: zinc finger protein 182] [Gene Type: protein-coding]","TcasGA2_TC015411; LOC103313306"]
[798,"NC_007421.3",572135,"SNV","A","T","Homozygous",21,21,100,1,13,9,0.41,38.29,22,22,10,14,null,1,1,"no","T/T","No",1,84.7,"XP_001814047.1:c.927T>A","XP_001814047.1:p.Asp309Glu","LOC660395",660395,null,"660395 [Gene Symbol: LOC660395] [Locus Tag: TcasGA2_TC015316] [Chromosome: LG6] [Map Location: ] [Description: bleomycin hydrolase] [Gene Type: protein-coding]","TcasGA2_TC015316; LOC660395"]
[799,"NC_007421.3",605475,"SNV","T","C","Heterozygous",18,26,69.23,1,6,14,0.3,39.44,20,28,8,10,0.89,0.97,0.99,"no","C/T","No",1,42.19,"XP_001814158.1:c.529A>G","XP_001814158.1:p.Thr177Ala","LOC100142136",100142136,null,"100142136 [Gene Symbol: LOC100142136] [Locus Tag: TcasGA2_TC015313] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142136] [Gene Type: protein-coding]","LOC100142136; TcasGA2_TC015313"]
[800,"NC_007421.3",661058,"SNV","A","G","Homozygous",23,23,100,1,13,14,0.48,37.26,27,27,12,16,null,1,1,"no","G/G","No",1,89.12,"XP_008194510.1:c.[200T>C]; XP_008194509.1:c.[200T>C]","XP_008194510.1:p.[Leu67Pro]; XP_008194509.1:p.[Leu67Pro]","LOC661263",661263,null,"661263 [Gene Symbol: LOC661263] [Locus Tag: TcasGA2_TC015308] [Chromosome: LG6] [Map Location: ] [Description: codanin-1] [Gene Type: protein-coding]","LOC661263; TcasGA2_TC015308"]
[801,"NC_007421.3",733655,"SNV","C","T","Heterozygous",9,23,39.13,1,5,4,0.44,38.33,9,24,8,8,0.16,1,1,"no","C/T","No",1,63.24,"XP_001814494.2:c.386C>T","XP_001814494.2:p.Ala129Val","LOC100141658",100141658,null,"100141658 [Gene Symbol: LOC100141658] [Locus Tag: TcasGA2_TC015423] [Chromosome: LG6] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC100141658; TcasGA2_TC015423"]
[802,"NC_007421.3",763167,"SNV","C","T","Homozygous",22,22,100,1,14,12,0.46,38.86,26,26,13,19,null,1,1,"no","T/T","No",1,87.71,"XP_008194515.1:c.107C>T","XP_008194515.1:p.Pro36Leu","Gr80",100142419,null,"100142419 [Gene Symbol: Gr80] [Locus Tag: TcasGA2_TC030166] [Chromosome: LG6] [Map Location: ] [Description: gustatory receptor] [Gene Type: protein-coding]","TcGr70; Gr80; TcasGA2_TC030166"]
[803,"NC_007421.3",817252,"SNV","A","G","Heterozygous",16,20,80,0.87,4,13,0.24,36.94,17,21,10,11,1.65,0.86,0.99,"no","A/G","No",1,8.88,"XP_015836191.1:c.995T>C","XP_015836191.1:p.Ile332Thr","LOC661974",661974,null,"661974 [Gene Symbol: LOC661974] [Locus Tag: TcasGA2_TC015295] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC661974] [Gene Type: protein-coding]","TcasGA2_TC015295; P157; LOC661974"]
[804,"NC_007421.3",937728,"SNV","A","G","Homozygous",20,20,100,1,9,14,0.39,37.85,23,23,13,13,null,1,1,"no","G/G","No",1,80.09,"XP_015836194.1:c.4372T>C","XP_015836194.1:p.Ser1458Pro","LOC662547",662547,null,"662547 [Gene Symbol: LOC662547] [Locus Tag: TcasGA2_TC015284] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC662547] [Gene Type: protein-coding]","LOC662547; TcasGA2_TC015284"]
[805,"NC_007421.3","989913..989914","MNV","TG","CT","Homozygous",21,24,87.5,1,12,16,0.43,35.57,28,32,12,17,null,1,1,"no","CT/CT","No",1,200,"XP_015836260.1:c.3780_3781delCAinsAG","XP_015836260.1:p.Thr1261Ala","LOC103313333",103313333,null,"103313333 [Gene Symbol: LOC103313333] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: unconventional myosin-XVIIIa] [Gene Type: protein-coding]","LOC103313333"]
[806,"NC_007421.3",989925,"SNV","C","A","Homozygous",21,24,87.5,0.97,10,17,0.37,34.86,27,31,10,13,null,0.96,1,"no","A/A","No",1,15.42,"XP_015836260.1:c.3769G>T","XP_015836260.1:p.Ala1257Ser","LOC103313333",103313333,null,"103313333 [Gene Symbol: LOC103313333] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: unconventional myosin-XVIIIa] [Gene Type: protein-coding]","LOC103313333"]
[807,"NC_007421.3","1562885..1562886","MNV","TA","CG","Homozygous",30,30,100,1,27,4,0.13,37.03,31,31,14,26,null,1,1,"no","CG/CG","No",1,200,"XP_015836386.1:c.276_277delTAinsCG","XP_015836386.1:p.Ile93Val","LOC662580",662580,null,"662580 [Gene Symbol: LOC662580] [Locus Tag: TcasGA2_TC015501] [Chromosome: LG6] [Map Location: ] [Description: sugar transporter 3] [Gene Type: protein-coding]","LOC662580; TcasGA2_TC015501; st3"]
[808,"NC_007421.3",2057303,"SNV","C","G","Homozygous",23,23,100,1,7,16,0.3,36.26,23,23,11,14,null,1,1,"no","G/G","No",1,89.12,"XP_967750.1:c.[1171G>C]; XP_008201637.1:c.[607G>C]","XP_967750.1:p.[Val391Leu]; XP_008201637.1:p.[Val203Leu]","LOC656106",656106,null,"656106 [Gene Symbol: LOC656106] [Locus Tag: TcasGA2_TC015173] [Chromosome: LG6] [Map Location: ] [Description: ubiquitin carboxyl-terminal hydrolase 2] [Gene Type: protein-coding]","LOC656106; TcasGA2_TC015173"]
[809,"NC_007421.3",2074706,"SNV","A","T","Homozygous",20,20,100,1,8,15,0.35,36.45,23,23,13,15,null,1,1,"no","T/T","No",1,81.7,"XP_008201663.1:c.[1303T>A]; XP_968140.1:c.[825+1005A>T]","XP_008201663.1:p.Leu435Ile","LOC656521, LOC103315247","656521 , 103315247",null,"656521 [Gene Symbol: LOC656521] [Locus Tag: TcasGA2_TC015540] [Chromosome: LG6] [Map Location: ] [Description: phosphoglycerate kinase] [Gene Type: protein-coding] || 103315247 [Gene Symbol: LOC103315247] [Locus Tag: TcasGA2_TC015169] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC656521; TcasGA2_TC015540 || TcasGA2_TC015169; LOC103315247"]
[810,"NC_007421.3","2180179..2180181","Deletion","GGC","-","Heterozygous",9,21,42.86,1,4,5,0.44,35.44,9,21,5,7,-1.96,0.1,1,"no","complex","No",1,200,"XP_008190371.1:c.[268_270delGGC]; XP_969409.1:c.[256_258delGGC]","XP_008190371.1:p.[Gly96del]; XP_969409.1:p.[Gly92del]","LOC657888",657888,null,"657888 [Gene Symbol: LOC657888] [Locus Tag: TcasGA2_TC015549] [Chromosome: LG6] [Map Location: ] [Description: glycine-rich cell wall structural protein] [Gene Type: protein-coding]","TcasGA2_TC015549; LOC657888"]
[811,"NC_007421.3",2239006,"SNV","C","T","Homozygous",21,21,100,1,15,10,0.4,36.81,25,25,9,16,null,1,1,"no","T/T","No",1,84.71,"XP_976295.1:c.85G>A","XP_976295.1:p.Gly29Ser","LOC658802",658802,null,"658802 [Gene Symbol: LOC658802] [Locus Tag: TcasGA2_TC015156] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC658802] [Gene Type: protein-coding]","LOC658802; TcasGA2_TC015156"]
[812,"NC_007421.3",2309032,"SNV","C","T","Homozygous",20,20,100,1,13,8,0.38,37.7,21,21,10,15,null,1,1,"no","T/T","No",1,81.7,"XP_970667.1:c.374C>T","XP_970667.1:p.Ser125Phe","LOC659249",659249,null,"659249 [Gene Symbol: LOC659249] [Locus Tag: TcasGA2_TC015559] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC659249] [Gene Type: protein-coding]","LOC659249; TcasGA2_TC015559"]
[813,"NC_007421.3",2426062,"SNV","T","C","Homozygous",24,24,100,1,15,17,0.47,36.67,32,32,16,16,null,1,1,"no","C/C","No",1,92.15,"XP_008190580.2:c.440T>C","XP_008190580.2:p.Val147Ala","LOC660300",660300,null,"660300 [Gene Symbol: LOC660300] [Locus Tag: TcasGA2_TC015566] [Chromosome: LG6] [Map Location: ] [Description: venom acid phosphatase Acph-1] [Gene Type: protein-coding]","TcasGA2_TC015566; LOC660300"]
[814,"NC_007421.3","2430778..2430780","MNV","GAT","TGC","Homozygous",22,22,100,1,6,20,0.23,35.73,26,26,13,17,null,1,1,"no","TGC/TGC","No",1,200,"XP_008190573.1:c.351_353delATCinsGCA","XP_008190573.1:p.Ser118Gln","LOC103312220",103312220,null,"103312220 [Gene Symbol: LOC103312220] [Locus Tag: TcasGA2_TC015142] [Chromosome: LG6] [Map Location: ] [Description: nicastrin] [Gene Type: protein-coding]","LOC103312220; TcasGA2_TC015142"]
[815,"NC_007421.3",2451777,"SNV","A","G","Homozygous",30,30,100,1,22,10,0.31,38.93,32,32,9,19,null,1,1,"no","G/G","No",1,110.19,"XP_008190620.1:c.[3503T>C]; XP_008190626.1:c.[3461T>C]","XP_008190620.1:p.[Val1168Ala]; XP_008190626.1:p.[Val1154Ala]","LOC661054, LOC660604","661054 , 660604",null,"661054 [Gene Symbol: LOC661054] [Locus Tag: TcasGA2_TC015569] [Chromosome: LG6] [Map Location: ] [Description: inter-alpha-trypsin inhibitor heavy chain H4] [Gene Type: protein-coding] || 660604 [Gene Symbol: LOC660604] [Locus Tag: TcasGA2_TC015138] [Chromosome: LG6] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 9] [Gene Type: protein-coding]","LOC661054; TcasGA2_TC015569 || LOC660604; TcasGA2_TC015138; ADAMTS9"]
[816,"NC_007421.3",2451846,"SNV","C","A","Heterozygous",6,23,26.09,0.99,0,6,0,41,6,25,1,1,3.1,0.04,0.36,"no","A/C","No",1,22.61,"XP_008190626.1:c.[3392G>T]; XP_008190620.1:c.[3434G>T]","XP_008190626.1:p.[Cys1131Phe]; XP_008190620.1:p.[Cys1145Phe]","LOC661054, LOC660604","661054 , 660604",null,"661054 [Gene Symbol: LOC661054] [Locus Tag: TcasGA2_TC015569] [Chromosome: LG6] [Map Location: ] [Description: inter-alpha-trypsin inhibitor heavy chain H4] [Gene Type: protein-coding] || 660604 [Gene Symbol: LOC660604] [Locus Tag: TcasGA2_TC015138] [Chromosome: LG6] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 9] [Gene Type: protein-coding]","LOC661054; TcasGA2_TC015569 || LOC660604; TcasGA2_TC015138; ADAMTS9"]
[817,"NC_007421.3",2516458,"SNV","A","C","Homozygous",20,20,100,1,16,6,0.27,36.7,22,22,12,15,null,1,1,"no","C/C","No",1,80.12,"XP_015836282.1:c.1371A>C","XP_015836282.1:p.Glu457Asp","LOC661265",661265,null,"661265 [Gene Symbol: LOC661265] [Locus Tag: TcasGA2_TC015117] [Chromosome: LG6] [Map Location: ] [Description: activating signal cointegrator 1 complex subunit 3] [Gene Type: protein-coding]","LOC661265; TcasGA2_TC015117"]
[818,"NC_007421.3",2694948,"SNV","C","A","Homozygous",21,21,100,1,8,17,0.32,37.71,25,25,10,13,null,1,1,"no","A/A","No",1,84.7,"XP_973367.1:c.9G>T","XP_973367.1:p.Glu3Asp","LOC662157",662157,null,"662157 [Gene Symbol: LOC662157] [Locus Tag: TcasGA2_TC015585] [Chromosome: LG6] [Map Location: ] [Description: bifunctional transcriptional activator/DNA repair enzyme Ada] [Gene Type: protein-coding]","TcasGA2_TC015585; LOC662157"]
[819,"NC_007421.3",2694952,"SNV","C","G","Homozygous",22,22,100,1,8,18,0.31,36.77,26,26,10,14,null,1,1,"no","G/G","No",1,86.11,"XP_973367.1:c.5G>C","XP_973367.1:p.Gly2Ala","LOC662157",662157,null,"662157 [Gene Symbol: LOC662157] [Locus Tag: TcasGA2_TC015585] [Chromosome: LG6] [Map Location: ] [Description: bifunctional transcriptional activator/DNA repair enzyme Ada] [Gene Type: protein-coding]","TcasGA2_TC015585; LOC662157"]
[820,"NC_007421.3",2706529,"SNV","C","T","Homozygous",24,24,100,1,12,14,0.46,34.79,26,26,12,16,null,1,1,"no","T/T","No",1,93.73,"XP_973265.1:c.541G>A","XP_973265.1:p.Ala181Thr","LOC662049",662049,null,"662049 [Gene Symbol: LOC662049] [Locus Tag: TcasGA2_TC015584] [Chromosome: LG6] [Map Location: ] [Description: ribosome biogenesis protein BOP1 homolog] [Gene Type: protein-coding]","LOC662049; TcasGA2_TC015584"]
[821,"NC_007421.3",2783894,"SNV","C","A","Homozygous",26,26,100,1,12,16,0.43,38.15,28,28,13,19,null,1,1,"no","A/A","No",1,99.74,"XP_008194698.1:c.3123C>A","XP_008194698.1:p.Asp1041Glu","LOC662012, LOC661726","662012 , 661726",null,"662012 [Gene Symbol: LOC662012] [Locus Tag: TcasGA2_TC015581] [Chromosome: LG6] [Map Location: ] [Description: protein neuralized] [Gene Type: protein-coding] || 661726 [Gene Symbol: LOC661726] [Locus Tag: TcasGA2_TC033390] [Chromosome: LG6] [Map Location: ] [Description: multidrug resistance-associated protein 4-like] [Gene Type: protein-coding]","TcasGA2_TC015581; LOC662012 || TcasGA2_TC033390; LOC661726"]
[822,"NC_007421.3","3413107..3413109","Deletion","CAA","-","Homozygous",20,20,100,1,11,13,0.46,36.4,24,24,11,17,null,1,1,"no","-/-","No",1,200,"XP_015836326.1:c.[2542_2544delCAA]; XP_015836325.1:c.[2545_2547delCAA]; XP_015836327.1:c.[2515_2517delCAA]; XP_008194733.1:c.[2491_2493delCAA]; XP_008194735.1:c.[2275_2277delCAA]","XP_015836326.1:p.[Gln855del]; XP_015836325.1:p.[Gln856del]; XP_015836327.1:p.[Gln846del]; XP_008194733.1:p.[Gln838del]; XP_008194735.1:p.[Gln766del]","LOC658049",658049,null,"658049 [Gene Symbol: LOC658049] [Locus Tag: TcasGA2_TC015608] [Chromosome: LG6] [Map Location: ] [Description: eukaryotic translation initiation factor 4E transporter] [Gene Type: protein-coding]","Eif4enif1; LOC658049; TcasGA2_TC015608"]
[823,"NC_007421.3",3419450,"SNV","A","C","Homozygous",20,20,100,1,16,7,0.3,38.2,23,23,11,13,null,1,1,"no","C/C","No",1,80.11,"XP_008194736.1:c.[840A>C]; XP_008194737.1:c.[840A>C]; XP_008194738.1:c.[840A>C]","XP_008194736.1:p.[Lys280Asn]; XP_008194737.1:p.[Lys280Asn]; XP_008194738.1:p.[Lys280Asn]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[824,"NC_007421.3",3419500,"SNV","A","C","Homozygous",26,26,100,1,13,16,0.45,37.04,29,29,14,16,null,1,1,"no","C/C","No",1,98.17,"XP_008194737.1:c.[890A>C]; XP_008194736.1:c.[890A>C]; XP_008194738.1:c.[890A>C]","XP_008194737.1:p.[Glu297Ala]; XP_008194736.1:p.[Glu297Ala]; XP_008194738.1:p.[Glu297Ala]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[825,"NC_007421.3",3445858,"SNV","T","G","Homozygous",23,23,100,1,18,14,0.44,38.87,32,32,13,17,null,1,1,"no","G/G","No",1,89.12,"XP_969783.1:c.882A>C","XP_969783.1:p.Lys294Asn","LOC658288",658288,null,"658288 [Gene Symbol: LOC658288] [Locus Tag: TcasGA2_TC015093] [Chromosome: LG6] [Map Location: ] [Description: rad50] [Gene Type: protein-coding]","LOC658288; TcasGA2_TC015093; rad50"]
[826,"NC_007421.3",3445883,"SNV","A","G","Homozygous",20,20,100,1,11,13,0.46,39.15,24,24,12,16,null,1,1,"no","G/G","No",1,80.09,"XP_969783.1:c.857T>C","XP_969783.1:p.Val286Ala","LOC658288",658288,null,"658288 [Gene Symbol: LOC658288] [Locus Tag: TcasGA2_TC015093] [Chromosome: LG6] [Map Location: ] [Description: rad50] [Gene Type: protein-coding]","LOC658288; TcasGA2_TC015093; rad50"]
[827,"NC_007421.3",3526416,"SNV","A","T","Homozygous",20,20,100,1,11,10,0.48,39.1,21,21,13,14,null,1,1,"no","T/T","No",1,81.69,"NP_001161903.1:c.605A>T","NP_001161903.1:p.Tyr202Phe","Pmp1-b",659324,"peritrophic matrix protein 1-B","659324 [Gene Symbol: Pmp1-b] [Locus Tag: TcasGA2_TC015620] [Chromosome: LG6] [Map Location: ] [Description: peritrophic matrix protein 1-B] [Gene Type: protein-coding]","TcasGA2_TC015620; Pmp1-b"]
[828,"NC_007421.3",3587342,"SNV","T","C","Homozygous",20,20,100,1,18,4,0.18,35.75,22,22,10,12,null,1,1,"no","C/C","No",1,80.12,"XP_970918.1:c.2381A>G","XP_970918.1:p.Glu794Gly","LOC659526",659526,null,"659526 [Gene Symbol: LOC659526] [Locus Tag: TcasGA2_TC015082] [Chromosome: LG6] [Map Location: ] [Description: DNA-directed RNA polymerase I subunit RPA1] [Gene Type: protein-coding]","LOC659526; TcasGA2_TC015082"]
[829,"NC_007421.3",3587793,"SNV","A","G","Homozygous",23,23,100,1,4,20,0.17,38.26,24,24,10,13,null,1,1,"no","G/G","No",1,89.12,"XP_970918.1:c.1987T>C","XP_970918.1:p.Cys663Arg","LOC659526",659526,null,"659526 [Gene Symbol: LOC659526] [Locus Tag: TcasGA2_TC015082] [Chromosome: LG6] [Map Location: ] [Description: DNA-directed RNA polymerase I subunit RPA1] [Gene Type: protein-coding]","LOC659526; TcasGA2_TC015082"]
[830,"NC_007421.3",3587802,"SNV","T","G","Homozygous",24,24,100,1,4,20,0.17,38.12,24,24,10,13,null,1,1,"no","G/G","No",1,92.13,"XP_970918.1:c.1978A>C","XP_970918.1:p.Ile660Leu","LOC659526",659526,null,"659526 [Gene Symbol: LOC659526] [Locus Tag: TcasGA2_TC015082] [Chromosome: LG6] [Map Location: ] [Description: DNA-directed RNA polymerase I subunit RPA1] [Gene Type: protein-coding]","LOC659526; TcasGA2_TC015082"]
[831,"NC_007421.3",3814103,"SNV","C","A","Homozygous",33,33,100,1,24,13,0.35,36.3,37,37,13,21,null,1,1,"no","A/A","No",1,120.81,"XP_015836420.1:c.[8204C>A]; XP_015836423.1:c.[7982C>A]; XP_015836419.1:c.[8255C>A]; XP_015836422.1:c.[8126C>A]; XP_015836421.1:c.[8195C>A]; XP_015836424.1:c.[7973C>A]","XP_015836420.1:p.[Thr2735Asn]; XP_015836423.1:p.[Thr2661Asn]; XP_015836419.1:p.[Thr2752Asn]; XP_015836422.1:p.[Thr2709Asn]; XP_015836421.1:p.[Thr2732Asn]; XP_015836424.1:p.[Thr2658Asn]","LOC660883",660883,null,"660883 [Gene Symbol: LOC660883] [Locus Tag: TcasGA2_TC015636] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized protein KIAA1109] [Gene Type: protein-coding]","LOC660883; TcasGA2_TC015636"]
[832,"NC_007421.3",4230786,"SNV","C","A","Heterozygous",5,21,23.81,0.96,1,4,0.2,39.2,5,21,3,4,2.11,0.27,0.33,"no","A/C","No",1,14.46,"XP_973569.2:c.1589G>T","XP_973569.2:p.Cys530Phe","LOC662377",662377,null,"662377 [Gene Symbol: LOC662377] [Locus Tag: TcasGA2_TC015049] [Chromosome: LG6] [Map Location: ] [Description: probable ATP-dependent RNA helicase DHX34] [Gene Type: protein-coding]","LOC662377; TcasGA2_TC015049"]
[833,"NC_007421.3",4230792,"SNV","A","G","Homozygous",20,20,100,1,13,7,0.35,37.3,20,20,12,14,null,1,1,"no","G/G","No",1,80.09,"XP_973569.2:c.1583T>C","XP_973569.2:p.Ile528Thr","LOC662377",662377,null,"662377 [Gene Symbol: LOC662377] [Locus Tag: TcasGA2_TC015049] [Chromosome: LG6] [Map Location: ] [Description: probable ATP-dependent RNA helicase DHX34] [Gene Type: protein-coding]","LOC662377; TcasGA2_TC015049"]
[834,"NC_007421.3",4271679,"SNV","T","C","Homozygous",27,30,90,1,15,16,0.48,37.52,31,34,13,19,null,0.98,1,"no","C/C","No",1,32.74,"XP_001813376.1:c.307A>G","XP_001813376.1:p.Lys103Glu","LOC100142306",100142306,null,"100142306 [Gene Symbol: LOC100142306] [Locus Tag: TcasGA2_TC015041] [Chromosome: LG6] [Map Location: ] [Description: odorant binding protein 3] [Gene Type: protein-coding]","TcasGA2_TC015041; OBP03; TcOBP6F; LOC100142306"]
[835,"NC_007421.3",4523376,"SNV","C","G","Heterozygous",16,24,66.67,1,14,4,0.22,36.94,18,26,9,13,-1.07,0.48,0.83,"no","C/G","No",1,47.74,"XP_008194862.1:c.2500C>G","XP_008194862.1:p.Arg834Gly","LOC663368",663368,null,"663368 [Gene Symbol: LOC663368] [Locus Tag: TcasGA2_TC015667] [Chromosome: LG6] [Map Location: ] [Description: tyrosine-protein kinase transmembrane receptor Ror] [Gene Type: protein-coding]","LOC663368; TcasGA2_TC015667"]
[836,"NC_007421.3",4556645,"SNV","C","T","Heterozygous",6,20,30,1,3,3,0.5,39.17,6,22,2,3,0.25,0.72,0.53,"no","C/T","No",1,33.5,"XP_008192908.1:c.19G>A","XP_008192908.1:p.Val7Met","LOC103312884",103312884,null,"103312884 [Gene Symbol: LOC103312884] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: putative uncharacterized protein DDB_G0287191] [Gene Type: protein-coding]","LOC103312884"]
[837,"NC_007421.3",4556647,"SNV","G","C","Heterozygous",6,20,30,1,3,3,0.5,40,6,22,2,3,1.48,0.72,0.53,"no","C/G","No",1,33.33,"XP_008192908.1:c.17C>G","XP_008192908.1:p.Ser6Cys","LOC103312884",103312884,null,"103312884 [Gene Symbol: LOC103312884] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: putative uncharacterized protein DDB_G0287191] [Gene Type: protein-coding]","LOC103312884"]
[838,"NC_007421.3",4990571,"SNV","G","A","Homozygous",18,21,85.71,0.82,14,5,0.26,38.11,19,24,12,14,null,0.85,0.97,"no","A/A","No",1,7.4,"XP_015836465.1:c.1952G>A","XP_015836465.1:p.Arg651Gln","LOC657193, LOC656607","657193 , 656607",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607"]
[839,"NC_007421.3",4992182,"SNV","A","C","Heterozygous",11,30,36.67,1,0,11,0,39.55,11,35,6,6,1.89,0.6,0.43,"no","A/C","No",1,70.22,"XP_015836482.1:c.[33A>C]; XP_015836465.1:c.[2655A>C]","XP_015836482.1:p.[Lys11Asn]; XP_015836465.1:p.[Lys885Asn]","LOC657193, LOC656607, LOC107398091","657193 , 656607 , 107398091",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding] || 107398091 [Gene Symbol: LOC107398091] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398091] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607 || LOC107398091"]
[840,"NC_007421.3","4992634..4992635","MNV","AC","GT","Heterozygous",11,25,44,1,6,5,0.45,39.27,11,28,6,10,0.42,0.99,1,"no","complex","No",1,200,"XP_015836465.1:c.[3107_3108delACinsGT]; XP_015836482.1:c.[485_486delACinsGT]","XP_015836465.1:p.[His1036Arg]; XP_015836482.1:p.[His162Arg]","LOC657193, LOC656607, LOC107398091","657193 , 656607 , 107398091",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding] || 107398091 [Gene Symbol: LOC107398091] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398091] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607 || LOC107398091"]
[841,"NC_007421.3",4993101,"SNV","G","T","Heterozygous",12,40,30,1,9,8,0.47,38.75,17,54,8,8,-0.63,0.46,0.98,"no","G/T","No",1,50.87,"XP_015836465.1:c.[3426+53G>T]; XP_015836482.1:c.[857G>T]","XP_015836482.1:p.Cys286Phe","LOC657193, LOC656607, LOC107398091","657193 , 656607 , 107398091",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding] || 107398091 [Gene Symbol: LOC107398091] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398091] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607 || LOC107398091"]
[842,"NC_007421.3",4993334,"SNV","G","A","Heterozygous",11,26,42.31,1,2,9,0.18,37.64,11,27,7,9,-1.66,0.83,0.78,"no","A/G","No",1,80.5,"XP_008194877.1:c.[1580C>T]; XP_015836465.1:c.[3426+286G>A]","XP_008194877.1:p.Thr527Ile","LOC657193, LOC656607, LOC656860","657193 , 656607 , 656860",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding] || 656860 [Gene Symbol: LOC656860] [Locus Tag: TcasGA2_TC015681] [Chromosome: LG6] [Map Location: ] [Description: centrosomal protein of 120 kDa] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607 || LOC656860; TcasGA2_TC015681"]
[843,"NC_007421.3",4993361,"SNV","T","A","Heterozygous",11,25,44,1,2,10,0.17,39.09,12,27,7,10,0.55,0.44,0.48,"no","A/T","No",1,83.26,"XP_015836465.1:c.[3426+313T>A]; XP_008194877.1:c.[1553A>T]","XP_008194877.1:p.Lys518Ile","LOC657193, LOC656607, LOC656860","657193 , 656607 , 656860",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding] || 656860 [Gene Symbol: LOC656860] [Locus Tag: TcasGA2_TC015681] [Chromosome: LG6] [Map Location: ] [Description: centrosomal protein of 120 kDa] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607 || LOC656860; TcasGA2_TC015681"]
[844,"NC_007421.3","5071989..5071990","MNV","AC","TG","Homozygous",20,20,100,1,12,10,0.45,37.18,22,22,12,13,null,1,1,"no","TG/TG","No",1,200,"XP_008194870.1:c.1076_1077delGTinsCA","XP_008194870.1:p.Ser359Thr","LOC103313423",103313423,null,"103313423 [Gene Symbol: LOC103313423] [Locus Tag: TcasGA2_TC015679] [Chromosome: LG6] [Map Location: ] [Description: spindle assembly abnormal protein 6 homolog] [Gene Type: protein-coding]","LOC103313423; TcasGA2_TC015679"]
[845,"NC_007421.3",5190110,"SNV","G","A","Homozygous",22,22,100,1,4,21,0.16,39.82,25,25,11,11,null,1,1,"no","A/A","No",1,87.7,"XP_008194864.1:c.914G>A","XP_008194864.1:p.Ser305Asn","LOC655209",655209,null,"655209 [Gene Symbol: LOC655209] [Locus Tag: TcasGA2_TC015021] [Chromosome: LG6] [Map Location: ] [Description: golgin subfamily A member 4] [Gene Type: protein-coding]","LOC655209; TcasGA2_TC015021"]
[846,"NC_007421.3",5203683,"SNV","G","T","Homozygous",19,20,95,1,3,16,0.16,38.63,19,20,10,12,null,1,1,"no","T/T","No",1,50.52,"XP_015836466.1:c.785C>A","XP_015836466.1:p.Pro262Gln","LOC654999",654999,null,"654999 [Gene Symbol: LOC654999] [Locus Tag: TcasGA2_TC015670] [Chromosome: LG6] [Map Location: ] [Description: serine protease 44] [Gene Type: protein-coding]","LOC654999; H164; TcasGA2_TC015670"]
[847,"NC_007421.3",5250129,"SNV","C","G","Heterozygous",12,21,57.14,1,7,6,0.46,38.42,13,22,8,9,0.14,0.37,0.76,"no","C/G","No",1,68.82,"XP_015836473.1:c.[1619C>G]; XP_015836472.1:c.[1910C>G]; XP_015836471.1:c.[2150C>G]","XP_015836473.1:p.[Thr540Ser]; XP_015836472.1:p.[Thr637Ser]; XP_015836471.1:p.[Thr717Ser]","LOC654936",654936,null,"654936 [Gene Symbol: LOC654936] [Locus Tag: TcasGA2_TC015023] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 136] [Gene Type: protein-coding]","TcasGA2_TC015023; LOC654936"]
[848,"NC_007421.3",5252459,"SNV","G","A","Heterozygous",6,20,30,1,6,2,0.25,37.83,8,25,6,4,-1.32,0.48,0.86,"no","A/G","No",1,33.66,"XP_015836471.1:c.[4480G>A]; XP_015836472.1:c.[4240G>A]; XP_015836473.1:c.[3949G>A]","XP_015836471.1:p.[Glu1494Lys]; XP_015836472.1:p.[Glu1414Lys]; XP_015836473.1:p.[Glu1317Lys]","LOC654936",654936,null,"654936 [Gene Symbol: LOC654936] [Locus Tag: TcasGA2_TC015023] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 136] [Gene Type: protein-coding]","TcasGA2_TC015023; LOC654936"]
[849,"NC_007421.3",5442335,"SNV","C","T","Heterozygous",5,22,22.73,0.97,5,0,0,39.4,5,27,3,3,0.74,0.03,0.4,"no","C/T","No",1,15.35,"XP_970735.1:c.601G>A","XP_970735.1:p.Asp201Asn","LOC659325",659325,null,"659325 [Gene Symbol: LOC659325] [Locus Tag: TcasGA2_TC014984] [Chromosome: LG6] [Map Location: ] [Description: septin-1] [Gene Type: protein-coding]","TcasGA2_TC014984; LOC659325"]
[850,"NC_007421.3",5498436,"SNV","A","G","Homozygous",21,23,91.3,1,10,13,0.43,37,23,25,11,12,null,0.96,1,"no","G/G","No",1,31.23,"XP_008191989.1:c.775A>G","XP_008191989.1:p.Ile259Val","LOC659527, LOC659589","659527 , 659589",null,"659527 [Gene Symbol: LOC659527] [Locus Tag: TcasGA2_TC030641] [Chromosome: LG6] [Map Location: ] [Description: actin cytoskeleton-regulatory complex protein PAN1] [Gene Type: protein-coding] || 659589 [Gene Symbol: LOC659589] [Locus Tag: TcasGA2_TC015701] [Chromosome: LG6] [Map Location: ] [Description: myb-binding protein 1A] [Gene Type: protein-coding]","TcasGA2_TC030641; LOC659527 || TcasGA2_TC015701; LOC659589"]
[851,"NC_007421.3",5498459,"SNV","T","A","Heterozygous",15,20,75,1,3,12,0.2,36.13,15,20,9,9,-2.27,0.73,0.91,"no","A/T","No",1,23.54,"XP_008191989.1:c.798T>A","XP_008191989.1:p.Asn266Lys","LOC659527, LOC659589","659527 , 659589",null,"659527 [Gene Symbol: LOC659527] [Locus Tag: TcasGA2_TC030641] [Chromosome: LG6] [Map Location: ] [Description: actin cytoskeleton-regulatory complex protein PAN1] [Gene Type: protein-coding] || 659589 [Gene Symbol: LOC659589] [Locus Tag: TcasGA2_TC015701] [Chromosome: LG6] [Map Location: ] [Description: myb-binding protein 1A] [Gene Type: protein-coding]","TcasGA2_TC030641; LOC659527 || TcasGA2_TC015701; LOC659589"]
[852,"NC_007421.3","5721659..5721660","MNV","AA","GG","Heterozygous",22,28,78.57,1,11,11,0.5,38.8,22,28,7,17,null,0.73,1,"no","complex","No",1,200,"XP_972225.1:c.[815_816delAAinsGG]; XP_008191971.1:c.[50-15359_50-15358delTTinsCC]","XP_972225.1:p.Glu272Gly","LOC660777, LOC660938","660777 , 660938",null,"660777 [Gene Symbol: LOC660777] [Locus Tag: TcasGA2_TC014971] [Chromosome: LG6] [Map Location: ] [Description: flotillin-2] [Gene Type: protein-coding] || 660938 [Gene Symbol: LOC660938] [Locus Tag: TcasGA2_TC015714] [Chromosome: LG6] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC660777; TcasGA2_TC014971 || LOC660938; TcasGA2_TC015714"]
[853,"NC_007421.3",5722394,"SNV","A","C","Heterozygous",7,23,30.43,1,1,6,0.14,35.14,7,32,6,4,-1.57,0.63,0.62,"no","A/C","No",1,38.57,"XP_972225.1:c.[1550A>C]; XP_008191971.1:c.[50-16093T>G]","XP_972225.1:p.Glu517Ala","LOC660777, LOC660938","660777 , 660938",null,"660777 [Gene Symbol: LOC660777] [Locus Tag: TcasGA2_TC014971] [Chromosome: LG6] [Map Location: ] [Description: flotillin-2] [Gene Type: protein-coding] || 660938 [Gene Symbol: LOC660938] [Locus Tag: TcasGA2_TC015714] [Chromosome: LG6] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC660777; TcasGA2_TC014971 || LOC660938; TcasGA2_TC015714"]
[854,"NC_007421.3",5828249,"SNV","G","A","Homozygous",22,22,100,1,10,13,0.43,35.36,23,23,13,15,null,1,1,"no","A/A","No",1,84.69,"XP_008191978.1:c.1409C>T","XP_008191978.1:p.Ala470Val","LOC662195",662195,null,"662195 [Gene Symbol: LOC662195] [Locus Tag: TcasGA2_TC014963] [Chromosome: LG6] [Map Location: ] [Description: ribosomal RNA processing protein 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC014963; LOC662195"]
[855,"NC_007421.3",5828271,"SNV","G","A","Homozygous",17,21,80.95,0.81,7,14,0.33,38.82,21,25,11,13,-1.03,0.76,0.99,"no","A/G","No",1,7.16,"XP_008191978.1:c.1387C>T","XP_008191978.1:p.Pro463Ser","LOC662195",662195,null,"662195 [Gene Symbol: LOC662195] [Locus Tag: TcasGA2_TC014963] [Chromosome: LG6] [Map Location: ] [Description: ribosomal RNA processing protein 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC014963; LOC662195"]
[856,"NC_007421.3",5828827,"SNV","C","T","Heterozygous",10,20,50,1,4,7,0.36,37.1,11,21,7,7,0.26,0.6,0.69,"no","C/T","No",1,82.05,"XP_008191978.1:c.877G>A","XP_008191978.1:p.Val293Ile","LOC662195",662195,null,"662195 [Gene Symbol: LOC662195] [Locus Tag: TcasGA2_TC014963] [Chromosome: LG6] [Map Location: ] [Description: ribosomal RNA processing protein 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC014963; LOC662195"]
[857,"NC_007421.3",5830709,"SNV","T","C","Heterozygous",8,20,40,1,5,4,0.44,36.88,9,22,7,7,0.85,0.48,1,"no","C/T","No",1,60.19,"XP_008191994.1:c.[1184A>G]; XP_015836610.1:c.[1139A>G]","XP_008191994.1:p.[Asn395Ser]; XP_015836610.1:p.[Asn380Ser]","LOC662227",662227,null,"662227 [Gene Symbol: LOC662227] [Locus Tag: TcasGA2_TC014962] [Chromosome: LG6] [Map Location: ] [Description: N-acetylglucosamine-6-sulfatase] [Gene Type: protein-coding]","LOC662227; TcasGA2_TC014962"]
[858,"NC_007421.3",5833090,"SNV","C","T","Heterozygous",12,23,52.17,1,8,6,0.43,37.58,14,28,7,9,0.77,0.96,1,"no","C/T","No",1,89.66,"XP_008191980.1:c.229G>A","XP_008191980.1:p.Asp77Asn","LOC103312640",103312640,null,"103312640 [Gene Symbol: LOC103312640] [Locus Tag: TcasGA2_TC014961] [Chromosome: LG6] [Map Location: ] [Description: iron-sulfur cluster co-chaperone protein HscB, mitochondrial] [Gene Type: protein-coding]","LOC103312640; TcasGA2_TC014961"]
[859,"NC_007421.3",7358339,"SNV","A","C","Homozygous",21,21,100,1,4,17,0.19,38.76,21,21,13,14,null,1,1,"no","C/C","No",1,83.13,"XP_015836516.1:c.[1032T>G]; XP_015836514.1:c.[115-1134A>C]","XP_015836516.1:p.Phe344Leu","LOC655778, LOC107398097","655778 , 107398097",null,"655778 [Gene Symbol: LOC655778] [Locus Tag: TcasGA2_TC015747] [Chromosome: LG6] [Map Location: ] [Description: TBC1 domain family member 1] [Gene Type: protein-coding] || 107398097 [Gene Symbol: LOC107398097] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: cilia- and flagella-associated protein 61] [Gene Type: protein-coding]","TcasGA2_TC015747; LOC655778 || LOC107398097"]
[860,"NC_007421.3",7412417,"SNV","G","A","Heterozygous",9,20,45,1,7,6,0.46,34.56,13,24,6,6,-1.98,0.52,0.88,"no","A/G","No",1,71.99,"XP_015836534.1:c.994G>A","XP_015836534.1:p.Gly332Ser","LOC655865",655865,null,"655865 [Gene Symbol: LOC655865] [Locus Tag: TcasGA2_TC015749] [Chromosome: LG6] [Map Location: ] [Description: diphthamide biosynthesis protein 2] [Gene Type: protein-coding]","LOC655865; TcasGA2_TC015749"]
[861,"NC_007421.3",7488253,"SNV","C","T","Homozygous",22,24,91.67,1,15,7,0.32,37.27,22,24,11,15,null,0.96,0.99,"no","T/T","No",1,30.23,"XP_015836505.1:c.3083G>A","XP_015836505.1:p.Arg1028Gln","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[862,"NC_007421.3",7488273,"SNV","T","A","Homozygous",26,26,100,1,12,14,0.46,37.85,26,26,13,18,null,1,1,"no","A/A","No",1,99.74,"XP_015836505.1:c.3063A>T","XP_015836505.1:p.Lys1021Asn","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[863,"NC_007421.3",7489159,"SNV","C","T","Homozygous",28,28,100,1,22,14,0.39,36.82,36,36,12,18,null,1,1,"no","T/T","No",1,105.76,"XP_015836505.1:c.2177G>A","XP_015836505.1:p.Arg726Gln","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[864,"NC_007421.3",7489183,"SNV","G","A","Heterozygous",6,21,28.57,1,3,6,0.33,35.33,9,26,2,4,-0.62,0.24,0.82,"no","A/G","No",1,33.63,"XP_015836505.1:c.2153C>T","XP_015836505.1:p.Ser718Leu","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[865,"NC_007421.3",7489405,"SNV","G","C","Homozygous",17,20,85,0.76,3,14,0.18,36.47,17,20,7,7,null,0.71,0.82,"no","C/C","No",1,6.15,"XP_015836505.1:c.1931C>G","XP_015836505.1:p.Ser644*","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[866,"NC_007421.3","7503223..7503224","MNV","TT","GC","Homozygous",18,20,90,1,5,17,0.23,37.94,22,24,10,12,null,0.99,0.97,"no","GC/GC","No",1,200,"XP_008194931.1:c.2753_2754delTTinsGC","XP_008194931.1:p.Phe918Cys","LOC656861",656861,null,"656861 [Gene Symbol: LOC656861] [Locus Tag: TcasGA2_TC015758] [Chromosome: LG6] [Map Location: ] [Description: syndetin] [Gene Type: protein-coding]","TcasGA2_TC015758; LOC656861"]
[867,"NC_007421.3",7579294,"SNV","G","C","Heterozygous",11,26,42.31,1,3,8,0.27,39.09,11,27,8,9,0.57,0.3,0.77,"no","C/G","No",1,80.49,"XP_008194915.1:c.4090C>G","XP_008194915.1:p.Pro1364Ala","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[868,"NC_007421.3",7579343,"SNV","G","T","Heterozygous",8,20,40,1,3,7,0.3,37.75,10,22,5,6,0.35,0.38,0.99,"no","G/T","No",1,55.59,"XP_008194915.1:c.4041C>A","XP_008194915.1:p.His1347Gln","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[869,"NC_007421.3",7579497,"SNV","G","A","Heterozygous",18,27,66.67,1,8,12,0.4,37.61,20,31,9,16,0.46,0.78,1,"no","A/G","No",1,53.24,"XP_008194915.1:c.3887C>T","XP_008194915.1:p.Thr1296Ile","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[870,"NC_007421.3",7581994,"SNV","T","C","Heterozygous",14,20,70,1,9,10,0.47,35.93,19,26,5,7,-1.2,0.9,0.99,"no","C/T","No",1,33.51,"XP_008194915.1:c.1390A>G","XP_008194915.1:p.Ile464Val","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[871,"NC_007421.3",7583821,"SNV","A","G","Homozygous",22,22,100,1,18,7,0.28,38.55,25,25,11,15,null,1,1,"no","G/G","No",1,86.11,"XP_015836513.1:c.[278A>G]; XP_008194916.1:c.[275A>G]","XP_015836513.1:p.[Lys93Arg]; XP_008194916.1:p.[Lys92Arg]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[872,"NC_007421.3","7587310^7587311","Insertion","-","AGG","Heterozygous",17,22,77.27,1,6,13,0.32,37.68,19,26,7,12,-0.61,0.91,1,"no","complex","No",1,200,"XP_008194916.1:c.[3718_3719insAGG]; XP_015836513.1:c.[3721_3722insAGG]","XP_008194916.1:p.[Glu1241_Pro1242insGlu]; XP_015836513.1:p.[Glu1242_Pro1243insGlu]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[873,"NC_007421.3",7591296,"SNV","G","C","Homozygous",29,29,100,1,13,18,0.42,38.69,31,31,17,21,null,1,1,"no","C/C","No",1,107.2,"XP_008194916.1:c.[4698G>C]; XP_015836513.1:c.[4701G>C]","XP_008194916.1:p.[Glu1566Asp]; XP_015836513.1:p.[Glu1567Asp]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[874,"NC_007421.3",7753229,"SNV","A","G","Heterozygous",9,27,33.33,1,5,5,0.5,36.11,10,29,7,6,-1.47,1,1,"no","A/G","No",1,53.29,"XP_015836540.1:c.[14A>G]; XP_969268.1:c.[14A>G]; XP_015836539.1:c.[107A>G]","XP_015836540.1:p.[Lys5Arg]; XP_969268.1:p.[Lys5Arg]; XP_015836539.1:p.[Lys36Arg]","LOC657733",657733,null,"657733 [Gene Symbol: LOC657733] [Locus Tag: TcasGA2_TC015765] [Chromosome: LG6] [Map Location: ] [Description: dynein light chain D] [Gene Type: protein-coding]","DLC-D; TcasGA2_TC015765; LOC657733"]
[875,"NC_007421.3",7753245,"SNV","C","G","Heterozygous",8,24,33.33,1,4,5,0.44,35.25,9,25,5,5,-2.2,0.69,1,"no","C/G","No",1,47.8,"XP_969268.1:c.[30C>G]; XP_015836540.1:c.[30C>G]; XP_015836539.1:c.[123C>G]","XP_969268.1:p.[Asn10Lys]; XP_015836540.1:p.[Asn10Lys]; XP_015836539.1:p.[Asn41Lys]","LOC657733",657733,null,"657733 [Gene Symbol: LOC657733] [Locus Tag: TcasGA2_TC015765] [Chromosome: LG6] [Map Location: ] [Description: dynein light chain D] [Gene Type: protein-coding]","DLC-D; TcasGA2_TC015765; LOC657733"]
[876,"NC_007421.3",7753247,"SNV","C","T","Heterozygous",8,24,33.33,1,4,5,0.44,33.25,9,27,5,5,-2.45,0.65,1,"no","C/T","No",1,47.78,"XP_969268.1:c.[32C>T]; XP_015836540.1:c.[32C>T]; XP_015836539.1:c.[125C>T]","XP_969268.1:p.[Ala11Val]; XP_015836540.1:p.[Ala11Val]; XP_015836539.1:p.[Ala42Val]","LOC657733",657733,null,"657733 [Gene Symbol: LOC657733] [Locus Tag: TcasGA2_TC015765] [Chromosome: LG6] [Map Location: ] [Description: dynein light chain D] [Gene Type: protein-coding]","DLC-D; TcasGA2_TC015765; LOC657733"]
[877,"NC_007421.3",7753251,"SNV","T","A","Heterozygous",8,24,33.33,1,4,5,0.44,35.25,9,27,5,5,-1.56,0.46,1,"no","A/T","No",1,47.74,"XP_015836540.1:c.[36T>A]; XP_969268.1:c.[36T>A]; XP_015836539.1:c.[129T>A]","XP_015836540.1:p.[Asp12Glu]; XP_969268.1:p.[Asp12Glu]; XP_015836539.1:p.[Asp43Glu]","LOC657733",657733,null,"657733 [Gene Symbol: LOC657733] [Locus Tag: TcasGA2_TC015765] [Chromosome: LG6] [Map Location: ] [Description: dynein light chain D] [Gene Type: protein-coding]","DLC-D; TcasGA2_TC015765; LOC657733"]
[878,"NC_007421.3",7985991,"SNV","A","T","Heterozygous",11,20,55,1,3,8,0.27,38.09,11,20,8,9,-0.68,0.38,0.33,"no","A/T","No",1,71.66,"XP_970603.1:c.280A>T","XP_970603.1:p.Thr94Ser","LOC659183",659183,null,"659183 [Gene Symbol: LOC659183] [Locus Tag: TcasGA2_TC015780] [Chromosome: LG6] [Map Location: ] [Description: serine protease P166] [Gene Type: protein-coding]","P166; TcasGA2_TC015780; LOC659183"]
[879,"NC_007421.3",7994258,"SNV","C","T","Heterozygous",9,20,45,1,7,2,0.22,37,9,20,5,8,-1.41,0.42,0.78,"no","C/T","No",1,71.67,"XP_970736.2:c.673C>T","XP_970736.2:p.Pro225Ser","LOC659326",659326,null,"659326 [Gene Symbol: LOC659326] [Locus Tag: TcasGA2_TC015781] [Chromosome: LG6] [Map Location: ] [Description: elongator complex protein 1] [Gene Type: protein-coding]","LOC659326; TcasGA2_TC015781"]
[880,"NC_007421.3",7996129,"SNV","G","A","Homozygous",24,24,100,1,14,15,0.48,37.42,29,29,10,12,null,1,1,"no","A/A","No",1,93.72,"XP_970736.2:c.2497G>A","XP_970736.2:p.Asp833Asn","LOC659326",659326,null,"659326 [Gene Symbol: LOC659326] [Locus Tag: TcasGA2_TC015781] [Chromosome: LG6] [Map Location: ] [Description: elongator complex protein 1] [Gene Type: protein-coding]","LOC659326; TcasGA2_TC015781"]
[881,"NC_007421.3","8031936^8031937","Insertion","-","T","Heterozygous",8,37,21.62,0.98,6,4,0.4,39.12,10,44,7,7,1.38,0.79,0.7,"no","-/T","No",1,17.66,"XP_015836506.1:c.431_432insA","XP_015836506.1:p.Asp145fs","LOC107398093",107398093,null,"107398093 [Gene Symbol: LOC107398093] [Locus Tag: TcasGA2_TC033445] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398093] [Gene Type: protein-coding]","TcasGA2_TC033445; LOC107398093"]
[882,"NC_007421.3",8033609,"SNV","T","A","Heterozygous",14,22,63.64,1,10,6,0.38,38,16,24,7,9,-1.33,0.85,0.97,"no","A/T","No",1,53.46,"XP_015836570.1:c.[8A>T]; XP_976329.2:c.[8A>T]","XP_015836570.1:p.[Tyr3Phe]; XP_976329.2:p.[Tyr3Phe]","LOC659792",659792,null,"659792 [Gene Symbol: LOC659792] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC659792] [Gene Type: protein-coding]","LOC659792"]
[883,"NC_007421.3",8828073,"SNV","C","T","Heterozygous",13,22,59.09,1,8,5,0.38,37.46,13,22,7,7,-0.6,0.59,0.99,"no","C/T","No",1,67.43,"XP_967344.1:c.721G>A","XP_967344.1:p.Ala241Thr","LOC655690",655690,null,"655690 [Gene Symbol: LOC655690] [Locus Tag: TcasGA2_TC014905] [Chromosome: LG6] [Map Location: ] [Description: peroxisome assembly protein 12] [Gene Type: protein-coding]","LOC655690; TcasGA2_TC014905"]
[884,"NC_007421.3",8828075,"SNV","C","T","Heterozygous",18,27,66.67,1,12,6,0.33,36.56,18,28,9,10,-0.49,0.46,1,"no","C/T","No",1,53.51,"XP_967344.1:c.719G>A","XP_967344.1:p.Ser240Asn","LOC655690",655690,null,"655690 [Gene Symbol: LOC655690] [Locus Tag: TcasGA2_TC014905] [Chromosome: LG6] [Map Location: ] [Description: peroxisome assembly protein 12] [Gene Type: protein-coding]","LOC655690; TcasGA2_TC014905"]
[885,"NC_007421.3",8992828,"SNV","A","G","Heterozygous",20,26,76.92,0.98,14,8,0.36,36.75,22,28,9,14,-2.83,0.18,0.96,"no","A/G","No",1,16.95,"XP_008195018.2:c.1955A>G","XP_008195018.2:p.Gln652Arg","LOC657578",657578,null,"657578 [Gene Symbol: LOC657578] [Locus Tag: TcasGA2_TC030598] [Chromosome: LG6] [Map Location: ] [Description: rabankyrin-5] [Gene Type: protein-coding]","LOC657578; TcasGA2_TC030598"]
[886,"NC_007421.3",9008733,"SNV","C","T","Homozygous",21,21,100,1,16,5,0.24,38.48,21,21,11,12,null,1,1,"no","T/T","No",1,84.7,"XP_969339.3:c.737C>T","XP_969339.3:p.Ala246Val","LOC657811",657811,null,"657811 [Gene Symbol: LOC657811] [Locus Tag: TcasGA2_TC015826] [Chromosome: LG6] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD1B] [Gene Type: protein-coding]","TcasGA2_TC015826; LOC657811"]
[887,"NC_007421.3",9099479,"SNV","G","A","Homozygous",20,20,100,1,9,18,0.33,37.3,27,27,10,9,null,1,1,"no","A/A","No",1,81.69,"XP_008195028.1:c.1075G>A","XP_008195028.1:p.Val359Ile","LOC658510",658510,null,"658510 [Gene Symbol: LOC658510] [Locus Tag: TcasGA2_TC015831] [Chromosome: LG6] [Map Location: ] [Description: pre-mRNA-processing factor 40 homolog A] [Gene Type: protein-coding]","LOC658510; TcasGA2_TC015831"]
[888,"NC_007421.3",9165855,"SNV","C","T","Homozygous",29,29,100,1,16,13,0.45,40.03,29,29,15,20,null,1,1,"no","T/T","No",1,108.76,"XP_008194975.1:c.2071C>T","XP_008194975.1:p.Pro691Ser","LOC100142233",100142233,null,"100142233 [Gene Symbol: LOC100142233] [Locus Tag: TcasGA2_TC015835] [Chromosome: LG6] [Map Location: ] [Description: dynein assembly factor 1, axonemal] [Gene Type: protein-coding]","LOC100142233; TcasGA2_TC015835"]
[889,"NC_007421.3",9214318,"SNV","A","T","Homozygous",24,24,100,1,11,18,0.38,36.67,29,29,16,18,null,1,1,"no","T/T","No",1,93.73,"XP_015836579.1:c.[2939T>A]; XP_015836577.1:c.[2939T>A]; XP_015836580.1:c.[2939T>A]; XP_015836578.1:c.[2939T>A]; XP_008194976.2:c.[2939T>A]","XP_015836579.1:p.[Ile980Asn]; XP_015836577.1:p.[Ile980Asn]; XP_015836580.1:p.[Ile980Asn]; XP_015836578.1:p.[Ile980Asn]; XP_008194976.2:p.[Ile980Asn]","LOC659101",659101,null,"659101 [Gene Symbol: LOC659101] [Locus Tag: TcasGA2_TC014880] [Chromosome: LG6] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC659101; TcasGA2_TC014880"]
[890,"NC_007421.3",9356444,"SNV","T","C","Homozygous",22,22,100,1,5,17,0.23,38.23,22,22,15,16,null,1,1,"no","C/C","No",1,86.13,"NP_001034522.1:c.1327T>C","NP_001034522.1:p.Ser443Pro","Tyr2",641599,"pro-phenol oxidase subunit 2","641599 [Gene Symbol: Tyr2] [Locus Tag: TcasGA2_TC015848] [Chromosome: LG6] [Map Location: ] [Description: pro-phenol oxidase subunit 2] [Gene Type: protein-coding]","TcasGA2_TC015848; PPO; TcTyr2; Tyr2; TcproTyr2; PPO2"]
[891,"NC_007421.3",9596500,"SNV","C","G","Heterozygous",15,21,71.43,1,6,9,0.4,37.53,15,23,11,11,1.4,0.87,1,"no","C/G","No",1,30.56,"XP_972127.1:c.[3916G>C]; XP_015836589.1:c.[3820G>C]; XP_015836588.1:c.[3919G>C]; XP_008195050.1:c.[3820G>C]; XP_015836590.1:c.[3772+147G>C]; XP_015836587.1:c.[3919G>C]","XP_972127.1:p.[Asp1306His]; XP_015836589.1:p.[Asp1274His]; XP_015836588.1:p.[Asp1307His]; XP_008195050.1:p.[Asp1274His]; XP_015836587.1:p.[Asp1307His]","LOC660831",660831,null,"660831 [Gene Symbol: LOC660831] [Locus Tag: TcasGA2_TC014862] [Chromosome: LG6] [Map Location: ] [Description: probable cation-transporting ATPase 13A3] [Gene Type: protein-coding]","LOC660831; TcasGA2_TC014862"]
[892,"NC_007421.3",9597271,"SNV","T","C","Homozygous",22,22,100,1,19,5,0.21,38.95,24,24,13,15,null,1,1,"no","C/C","No",1,86.14,"XP_015836588.1:c.[3148A>G]; XP_015836589.1:c.[3049A>G]; XP_008195050.1:c.[3049A>G]; XP_972127.1:c.[3145A>G]; XP_015836590.1:c.[3148A>G]; XP_015836587.1:c.[3148A>G]","XP_015836588.1:p.[Ile1050Val]; XP_015836589.1:p.[Ile1017Val]; XP_008195050.1:p.[Ile1017Val]; XP_972127.1:p.[Ile1049Val]; XP_015836590.1:p.[Ile1050Val]; XP_015836587.1:p.[Ile1050Val]","LOC660831",660831,null,"660831 [Gene Symbol: LOC660831] [Locus Tag: TcasGA2_TC014862] [Chromosome: LG6] [Map Location: ] [Description: probable cation-transporting ATPase 13A3] [Gene Type: protein-coding]","LOC660831; TcasGA2_TC014862"]
[893,"NC_007421.3",9877959,"SNV","T","C","Heterozygous",15,48,31.25,1,11,4,0.27,39.53,15,53,9,12,-0.26,0.62,1,"no","C/T","No",1,71.58,"XP_015836604.1:c.[8-213A>G]; XP_015836603.1:c.[1676A>G]","XP_015836603.1:p.Asp559Gly","LOC107398116",107398116,null,"107398116 [Gene Symbol: LOC107398116] [Locus Tag: TcasGA2_TC033477] [Chromosome: LG6] [Map Location: ] [Description: 52 kDa repressor of the inhibitor of the protein kinase-like] [Gene Type: protein-coding]","LOC107398116; TcasGA2_TC033477"]
[894,"NC_007422.5",912545,"SNV","T","C","Homozygous",28,28,100,1,24,7,0.23,37.96,31,31,10,20,null,1,1,"no","C/C","No",1,104.18,"XP_008195157.1:c.964A>G","XP_008195157.1:p.Thr322Ala","LOC661271",661271,null,"661271 [Gene Symbol: LOC661271] [Locus Tag: TcasGA2_TC009455] [Chromosome: LG7] [Map Location: ] [Description: toll-like receptor 3] [Gene Type: protein-coding]","LOC661271; TcasGA2_TC009455"]
[895,"NC_007422.5",1040850,"SNV","A","G","Homozygous",21,21,100,1,17,4,0.19,38.38,21,21,8,13,null,1,1,"no","G/G","No",1,83.09,"XP_008195140.1:c.[355A>G]; XP_015836736.1:c.[355A>G]; XP_015836735.1:c.[355A>G]; XP_015836734.1:c.[355A>G]; XP_015836733.1:c.[355A>G]; XP_015836737.1:c.[355A>G]","XP_008195140.1:p.[Lys119Glu]; XP_015836736.1:p.[Lys119Glu]; XP_015836735.1:p.[Lys119Glu]; XP_015836734.1:p.[Lys119Glu]; XP_015836733.1:p.[Lys119Glu]; XP_015836737.1:p.[Lys119Glu]","LOC660611",660611,null,"660611 [Gene Symbol: LOC660611] [Locus Tag: TcasGA2_TC009361] [Chromosome: LG7] [Map Location: ] [Description: complement receptor type 2] [Gene Type: protein-coding]","TcasGA2_TC009361; LOC660611"]
[896,"NC_007422.5",1134696,"SNV","C","T","Homozygous",22,22,100,1,15,12,0.44,37.91,27,27,14,13,null,1,1,"no","T/T","No",1,87.71,"XP_008195128.1:c.623G>A","XP_008195128.1:p.Arg208Lys","LOC659993",659993,null,"659993 [Gene Symbol: LOC659993] [Locus Tag: TcasGA2_TC033519] [Chromosome: LG7] [Map Location: ] [Description: intron-binding protein aquarius] [Gene Type: protein-coding]","LOC659993; AQR; TcasGA2_TC033519"]
[897,"NC_007422.5",1134756,"SNV","A","G","Homozygous",22,22,100,1,16,8,0.33,37.95,24,24,11,13,null,1,1,"no","G/G","No",1,86.11,"XP_008195128.1:c.563T>C","XP_008195128.1:p.Leu188Pro","LOC659993",659993,null,"659993 [Gene Symbol: LOC659993] [Locus Tag: TcasGA2_TC033519] [Chromosome: LG7] [Map Location: ] [Description: intron-binding protein aquarius] [Gene Type: protein-coding]","LOC659993; AQR; TcasGA2_TC033519"]
[898,"NC_007422.5",1330908,"SNV","T","G","Heterozygous",15,20,75,0.98,6,10,0.38,39.67,16,23,6,9,2.84,0.4,1,"no","G/T","No",1,17.39,"XP_969341.2:c.8907A>C","XP_969341.2:p.Glu2969Asp","LOC657813",657813,null,"657813 [Gene Symbol: LOC657813] [Locus Tag: TcasGA2_TC009430] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC657813] [Gene Type: protein-coding]","TcasGA2_TC009430; LOC657813"]
[899,"NC_007422.5",1343161,"SNV","C","T","Homozygous",22,22,100,1,12,10,0.45,35.91,22,22,10,16,null,1,1,"no","T/T","No",1,87.71,"XP_969341.2:c.1954G>A","XP_969341.2:p.Ala652Thr","LOC657813",657813,null,"657813 [Gene Symbol: LOC657813] [Locus Tag: TcasGA2_TC009430] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC657813] [Gene Type: protein-coding]","TcasGA2_TC009430; LOC657813"]
[900,"NC_007422.5",1378387,"SNV","G","A","Heterozygous",10,22,45.45,1,10,1,0.09,38.9,11,24,5,6,0.63,0.73,0.79,"no","A/G","No",1,78.89,"XP_001810799.2:c.475G>A","XP_001810799.2:p.Asp159Asn","LOC100142531",100142531,null,"100142531 [Gene Symbol: LOC100142531] [Locus Tag: TcasGA2_TC009384] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC100142531] [Gene Type: protein-coding]","TcasGA2_TC009384; LOC100142531"]
[901,"NC_007422.5",1397559,"SNV","C","G","Heterozygous",11,24,45.83,1,5,7,0.42,36.36,12,26,10,9,-1.13,0.68,0.69,"no","C/G","No",1,86.05,"XP_968761.1:c.131C>G","XP_968761.1:p.Ser44Trp","LOC657197",657197,null,"657197 [Gene Symbol: LOC657197] [Locus Tag: TcasGA2_TC009387] [Chromosome: LG7] [Map Location: ] [Description: probable RNA-binding protein CG14230] [Gene Type: protein-coding]","LOC657197; TcasGA2_TC009387"]
[902,"NC_007422.5",1454000,"SNV","T","C","Homozygous",20,20,100,1,11,9,0.45,36.05,20,20,8,11,null,1,1,"no","C/C","No",1,80.11,"XP_008195091.1:c.611T>C","XP_008195091.1:p.Val204Ala","LOC103313489",103313489,null,"103313489 [Gene Symbol: LOC103313489] [Locus Tag: TcasGA2_TC009390] [Chromosome: LG7] [Map Location: ] [Description: probable ATP-dependent RNA helicase DDX27] [Gene Type: protein-coding]","LOC103313489; TcasGA2_TC009390"]
[903,"NC_007422.5",1503201,"SNV","G","C","Heterozygous",13,21,61.9,1,13,5,0.28,38.15,18,26,7,10,0.43,0.72,0.91,"no","C/G","No",1,56.09,"XP_967265.2:c.951C>G","XP_967265.2:p.Asp317Glu","LOC655612",655612,null,"655612 [Gene Symbol: LOC655612] [Locus Tag: TcasGA2_TC009417] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655612] [Gene Type: protein-coding]","LOC655612; TcasGA2_TC009417"]
[904,"NC_007422.5",1516310,"SNV","C","G","Homozygous",24,24,100,1,12,13,0.48,38.29,25,25,14,16,null,1,1,"no","G/G","No",1,92.12,"XP_008195078.1:c.[267C>G]; XP_966821.1:c.[267C>G]","XP_008195078.1:p.[Asn89Lys]; XP_966821.1:p.[Asn89Lys]","LOC655212",655212,null,"655212 [Gene Symbol: LOC655212] [Locus Tag: TcasGA2_TC009394] [Chromosome: LG7] [Map Location: ] [Description: peptidyl-prolyl cis-trans isomerase FKBP8] [Gene Type: protein-coding]","LOC655212; TcasGA2_TC009394"]
[905,"NC_007422.5",1592486,"SNV","T","G","Homozygous",23,23,100,1,8,15,0.35,38.26,23,23,15,16,null,1,1,"no","G/G","No",1,89.12,"XP_015836652.1:c.1369A>C","XP_015836652.1:p.Lys457Gln","LOC103313532",103313532,null,"103313532 [Gene Symbol: LOC103313532] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313532] [Gene Type: protein-coding]","LOC103313532"]
[906,"NC_007422.5",1592514,"SNV","G","T","Homozygous",23,23,100,1,10,14,0.42,38.35,24,24,13,15,null,1,1,"no","T/T","No",1,90.71,"XP_015836652.1:c.1341C>A","XP_015836652.1:p.Phe447Leu","LOC103313532",103313532,null,"103313532 [Gene Symbol: LOC103313532] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313532] [Gene Type: protein-coding]","LOC103313532"]
[907,"NC_007422.5",1804981,"SNV","G","T","Homozygous",20,20,100,1,12,12,0.5,36.95,24,24,14,15,null,1,1,"no","T/T","No",1,81.7,"XP_008195271.1:c.[711G>T]; XP_008195270.1:c.[816G>T]","XP_008195271.1:p.[Lys237Asn]; XP_008195270.1:p.[Lys272Asn]","LOC103313546",103313546,null,"103313546 [Gene Symbol: LOC103313546] [Locus Tag: TcasGA2_TC009516] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313546] [Gene Type: protein-coding]","LOC103313546; TcasGA2_TC009516"]
[908,"NC_007422.5",1814716,"SNV","T","A","Homozygous",22,22,100,1,14,13,0.48,36.73,27,27,15,17,null,1,1,"no","A/A","No",1,87.71,"XP_968071.1:c.2135A>T","XP_968071.1:p.Tyr712Phe","LOC656445",656445,null,"656445 [Gene Symbol: LOC656445] [Locus Tag: TcasGA2_TC009293] [Chromosome: LG7] [Map Location: ] [Description: nucleolar protein 6] [Gene Type: protein-coding]","LOC656445; TcasGA2_TC009293"]
[909,"NC_007422.5",1938453,"SNV","C","T","Homozygous",20,20,100,1,8,15,0.35,37.95,23,23,12,14,null,1,1,"no","T/T","No",1,81.69,"XP_015836654.1:c.3857G>A","XP_015836654.1:p.Ser1286Asn","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[910,"NC_007422.5",1941366,"SNV","C","G","Homozygous",20,20,100,1,11,9,0.45,36.05,20,20,13,14,null,1,1,"no","G/G","No",1,80.08,"XP_015836654.1:c.944G>C","XP_015836654.1:p.Gly315Ala","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[911,"NC_007422.5","1963852^1963853","Insertion","-","CAG","Homozygous",22,22,100,1,12,12,0.5,38.15,24,24,16,16,null,1,1,"no","CAG/CAG","No",1,200,"XP_008195294.1:c.1059_1060insCAG","XP_008195294.1:p.Gln353_Glu354insGln","LOC100141679",100141679,null,"100141679 [Gene Symbol: LOC100141679] [Locus Tag: TcasGA2_TC009528] [Chromosome: LG7] [Map Location: ] [Description: bromodomain-containing protein DDB_G0280777] [Gene Type: protein-coding]","TcasGA2_TC009528; LOC100141679"]
[912,"NC_007422.5",2239419,"SNV","C","T","Homozygous",20,20,100,1,11,15,0.42,37.1,26,26,13,15,null,1,1,"no","T/T","No",1,81.7,"XP_971699.2:c.788C>T","XP_971699.2:p.Thr263Ile","LOC660369",660369,null,"660369 [Gene Symbol: LOC660369] [Locus Tag: TcasGA2_TC009543] [Chromosome: LG7] [Map Location: ] [Description: single-strand selective monofunctional uracil DNA glycosylase] [Gene Type: protein-coding]","LOC660369; TcasGA2_TC009543"]
[913,"NC_007422.5",2244784,"SNV","A","C","Homozygous",21,21,100,1,13,13,0.5,37.29,26,26,10,13,null,1,1,"no","C/C","No",1,83.12,"XP_008195312.1:c.16T>G","XP_008195312.1:p.Ser6Ala","LOC660492",660492,null,"660492 [Gene Symbol: LOC660492] [Locus Tag: TcasGA2_TC009262] [Chromosome: LG7] [Map Location: ] [Description: protein HEXIM] [Gene Type: protein-coding]","LOC660492; TcasGA2_TC009262"]
[914,"NC_007422.5",2306958,"SNV","A","G","Homozygous",20,20,100,1,14,6,0.3,35.45,20,20,12,15,null,1,1,"no","G/G","No",1,74.06,"XP_008195317.2:c.10604A>G","XP_008195317.2:p.Asn3535Ser","LOC660888",660888,null,"660888 [Gene Symbol: LOC660888] [Locus Tag: TcasGA2_TC009548] [Chromosome: LG7] [Map Location: ] [Description: prolow-density lipoprotein receptor-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC009548; LOC660888"]
[915,"NC_007422.5",2311659,"SNV","T","C","Heterozygous",11,20,55,1,1,11,0.08,38.27,12,21,5,6,0.46,0.66,0.8,"no","C/T","No",1,71.7,"XP_008195317.2:c.13507T>C","XP_008195317.2:p.Cys4503Arg","LOC660888",660888,null,"660888 [Gene Symbol: LOC660888] [Locus Tag: TcasGA2_TC009548] [Chromosome: LG7] [Map Location: ] [Description: prolow-density lipoprotein receptor-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC009548; LOC660888"]
[916,"NC_007422.5",2315099,"SNV","C","T","Heterozygous",16,21,76.19,0.99,12,12,0.5,36.12,24,31,8,12,-1.07,0.93,1,"no","C/T","No",1,19.16,"XP_008195318.1:c.1006C>T","XP_008195318.1:p.Pro336Ser","LOC661000",661000,null,"661000 [Gene Symbol: LOC661000] [Locus Tag: TcasGA2_TC009549] [Chromosome: LG7] [Map Location: ] [Description: zinc finger MYND domain-containing protein 10 homolog] [Gene Type: protein-coding]","TcasGA2_TC009549; LOC661000"]
[917,"NC_007422.5",2494326,"SNV","C","A","Heterozygous",8,23,34.78,1,0,8,0,34.38,8,23,4,3,-3.65,0.09,0.29,"no","A/C","No",1,47.02,"XP_008195331.1:c.[545C>A]; XP_008195330.1:c.[578C>A]","XP_008195331.1:p.[Pro182His]; XP_008195330.1:p.[Pro193His]","LOC662018",662018,null,"662018 [Gene Symbol: LOC662018] [Locus Tag: TcasGA2_TC009558] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC662018; TcasGA2_TC009558"]
[918,"NC_007422.5",2496829,"SNV","G","A","Homozygous",20,20,100,1,10,10,0.5,37.45,20,20,11,16,null,1,1,"no","A/A","No",1,81.69,"XP_973305.1:c.586G>A","XP_973305.1:p.Val196Ile","LOC662091",662091,null,"662091 [Gene Symbol: LOC662091] [Locus Tag: TcasGA2_TC009559] [Chromosome: LG7] [Map Location: ] [Description: centromere/kinetochore protein zw10 homolog] [Gene Type: protein-coding]","LOC662091; TcasGA2_TC009559; mit(1)15; zw10"]
[919,"NC_007422.5",2566642,"SNV","C","G","Homozygous",21,21,100,1,15,6,0.29,38.81,21,21,7,13,null,1,1,"no","G/G","No",1,83.1,"XP_015836994.1:c.[1721C>G]; XP_008195334.1:c.[1721C>G]","XP_015836994.1:p.[Ala574Gly]; XP_008195334.1:p.[Ala574Gly]","LOC100142374",100142374,null,"100142374 [Gene Symbol: LOC100142374] [Locus Tag: TcasGA2_TC009561] [Chromosome: LG7] [Map Location: ] [Description: component of oligomeric golgi complex 1] [Gene Type: protein-coding]","pebbled; TcasGA2_TC009561; Cog1; LOC100142374; peb"]
[920,"NC_007422.5","2813871..2813872","MNV","CA","GT","Heterozygous",15,23,65.22,1,6,9,0.4,35.82,15,24,11,9,-3.65,0.71,0.95,"no","complex","No",1,200,"XP_008195344.1:c.[4613_4614delCAinsGT]; XP_008195345.1:c.[4162+586_4162+587delCAinsGT]","XP_008195344.1:p.Ala1538Gly","LOC107398175, LOC662647","107398175 , 662647",null,"107398175 [Gene Symbol: LOC107398175] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398175] [Gene Type: ncRNA] || 662647 [Gene Symbol: LOC662647] [Locus Tag: TcasGA2_TC009576] [Chromosome: LG7] [Map Location: ] [Description: zinc finger FYVE domain-containing protein 26 homolog] [Gene Type: protein-coding]","LOC107398175 || LOC662647; TcasGA2_TC009576"]
[921,"NC_007422.5",2841898,"SNV","C","G","Heterozygous",5,21,23.81,0.98,2,5,0.29,39.2,7,31,4,4,0.21,0.2,0.76,"no","C/G","No",1,17.89,"NP_001161921.1:c.873C>G","NP_001161921.1:p.Asp291Glu","Pmp2-c",662882,"peritrophic matrix protein 2-C","662882 [Gene Symbol: Pmp2-c] [Locus Tag: TcasGA2_TC009580] [Chromosome: LG7] [Map Location: ] [Description: peritrophic matrix protein 2-C] [Gene Type: protein-coding]","TcasGA2_TC009580; Pmp2-c"]
[922,"NC_007422.5",2916276,"SNV","T","C","Homozygous",28,33,84.85,0.97,18,12,0.4,37.61,30,35,13,19,null,0.99,1,"no","C/C","No",1,15.54,"XP_008195359.1:c.1142T>C","XP_008195359.1:p.Val381Ala","LOC663130",663130,null,"663130 [Gene Symbol: LOC663130] [Locus Tag: TcasGA2_TC009583] [Chromosome: LG7] [Map Location: ] [Description: diacylglycerol kinase 1] [Gene Type: protein-coding]","TcasGA2_TC009583; LOC663130"]
[923,"NC_007422.5",2943084,"SNV","C","T","Heterozygous",6,22,27.27,1,0,6,0,39.33,6,22,3,3,-0.11,{"v":0.00805,"d":"8.05E-03"},0.13,"no","C/T","No",1,27.88,"XP_008196505.2:c.[53G>A]; XP_008196524.2:c.[53G>A]","XP_008196505.2:p.[Ser18Asn]; XP_008196524.2:p.[Ser18Asn]","LOC103313876",103313876,null,"103313876 [Gene Symbol: LOC103313876] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313876] [Gene Type: protein-coding]","LOC103313876"]
[924,"NC_007422.5",3062995,"SNV","G","A","Heterozygous",6,24,25,1,2,4,0.33,39.67,6,24,2,2,1.93,0.24,0.5,"no","complex","No",1,121.76,"XP_968072.1:c.788C>T","XP_968072.1:p.Ser263Phe","LOC656446",656446,null,"656446 [Gene Symbol: LOC656446] [Locus Tag: TcasGA2_TC030592] [Chromosome: LG7] [Map Location: ] [Description: sister chromatid cohesion protein DCC1] [Gene Type: protein-coding]","TcasGA2_TC030592; LOC656446"]
[925,"NC_007422.5",3071303,"SNV","T","C","Homozygous",20,20,100,1,13,10,0.43,36.25,23,23,12,13,null,1,1,"no","C/C","No",1,80.11,"XP_968458.1:c.1732A>G","XP_968458.1:p.Ile578Val","LOC656865",656865,null,"656865 [Gene Symbol: LOC656865] [Locus Tag: TcasGA2_TC009212] [Chromosome: LG7] [Map Location: ] [Description: EGF-like domain-containing protein 2] [Gene Type: protein-coding]","LOC656865; TcasGA2_TC009212"]
[926,"NC_007422.5",3094795,"SNV","C","T","Heterozygous",8,20,40,1,4,4,0.5,37.88,8,20,4,6,-0.5,0.18,1,"no","C/T","No",1,58.93,"XP_008195387.1:c.[11G>A]; XP_008195388.1:c.[11G>A]","XP_008195387.1:p.[Arg4His]; XP_008195388.1:p.[Arg4His]","LOC657278",657278,null,"657278 [Gene Symbol: LOC657278] [Locus Tag: TcasGA2_TC009208] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC657278; TcasGA2_TC009208"]
[927,"NC_007422.5","3173504^3173505","Insertion","-","ATACCC","Homozygous",20,20,100,1,9,11,0.45,38.35,20,20,8,11,null,1,1,"no","ATACCC/ATACCC","No",1,200,"NP_001137601.1:c.1030_1031insATACCC","NP_001137601.1:p.Lys344delinsAsnThrGln","Gr102",100142554,"gustatory receptor","100142554 [Gene Symbol: Gr102] [Locus Tag: TcasGA2_TC030224] [Chromosome: LG7] [Map Location: ] [Description: gustatory receptor] [Gene Type: protein-coding]","TcasGA2_TC030224; Gr102; TcGr135"]
[928,"NC_007422.5",3186209,"SNV","C","T","Heterozygous",7,20,35,1,6,4,0.4,40,10,27,6,6,2.14,0.63,0.98,"no","C/T","No",1,46.19,"XP_015836928.1:c.[941C>T]; XP_008195400.1:c.[941C>T]; XP_015836929.1:c.[338C>T]; XP_008195399.1:c.[941C>T]; XP_008195401.1:c.[941C>T]","XP_015836928.1:p.[Thr314Ile]; XP_008195400.1:p.[Thr314Ile]; XP_015836929.1:p.[Thr113Ile]; XP_008195399.1:p.[Thr314Ile]; XP_008195401.1:p.[Thr314Ile]","LOC658515",658515,null,"658515 [Gene Symbol: LOC658515] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase T] [Gene Type: protein-coding]","LOC658515"]
[929,"NC_007422.5",3196948,"SNV","A","T","Homozygous",18,20,90,0.99,9,11,0.45,37.17,20,22,10,11,null,1,1,"no","T/T","No",1,19.95,"XP_015836864.1:c.[2951A>T]; XP_015836865.1:c.[1751A>T]","XP_015836864.1:p.[Lys984Ile]; XP_015836865.1:p.[Lys584Ile]","LOC103313579",103313579,null,"103313579 [Gene Symbol: LOC103313579] [Locus Tag: TcasGA2_TC009605] [Chromosome: LG7] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase kappa] [Gene Type: protein-coding]","TcasGA2_TC009605; LOC103313579"]
[930,"NC_007422.5",3197266,"SNV","T","A","Homozygous",20,22,90.91,1,3,19,0.14,40,22,24,11,8,null,0.86,1,"no","A/A","No",1,26.18,"XP_015836865.1:c.[1964T>A]; XP_015836864.1:c.[3164T>A]","XP_015836865.1:p.[Met655Lys]; XP_015836864.1:p.[Met1055Lys]","LOC103313579",103313579,null,"103313579 [Gene Symbol: LOC103313579] [Locus Tag: TcasGA2_TC009605] [Chromosome: LG7] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase kappa] [Gene Type: protein-coding]","TcasGA2_TC009605; LOC103313579"]
[931,"NC_007422.5",3197278,"SNV","G","A","Homozygous",22,22,100,1,1,21,0.05,39.45,22,22,12,9,null,1,1,"no","A/A","No",1,87.71,"XP_015836864.1:c.[3176G>A]; XP_015836865.1:c.[1976G>A]","XP_015836864.1:p.[Gly1059Asp]; XP_015836865.1:p.[Gly659Asp]","LOC103313579",103313579,null,"103313579 [Gene Symbol: LOC103313579] [Locus Tag: TcasGA2_TC009605] [Chromosome: LG7] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase kappa] [Gene Type: protein-coding]","TcasGA2_TC009605; LOC103313579"]
[932,"NC_007422.5","3214267^3214268","Insertion","-","AAGTCG","Homozygous",23,23,100,1,6,17,0.26,37.16,23,23,12,14,null,1,1,"no","AAGTCG/AAGTCG","No",1,200,"XP_970329.1:c.[298_299insAAGTCG]; XP_008195405.1:c.[298_299insAAGTCG]; XP_008195406.1:c.[298_299insAAGTCG]","XP_970329.1:p.[Lys100_Glu101insValGlu]; XP_008195405.1:p.[Lys100_Glu101insValGlu]; XP_008195406.1:p.[Lys100_Glu101insValGlu]","LOC658885",658885,null,"658885 [Gene Symbol: LOC658885] [Locus Tag: TcasGA2_TC009607] [Chromosome: LG7] [Map Location: ] [Description: pre-mRNA-processing factor 39] [Gene Type: protein-coding]","LOC658885; TcasGA2_TC009607"]
[933,"NC_007422.5",3220585,"SNV","C","G","Homozygous",20,20,100,1,7,15,0.32,37.7,22,22,12,14,null,1,1,"no","G/G","No",1,80.09,"XP_008195404.1:c.2298G>C","XP_008195404.1:p.Met766Ile","LOC658953",658953,null,"658953 [Gene Symbol: LOC658953] [Locus Tag: TcasGA2_TC009201] [Chromosome: LG7] [Map Location: ] [Description: eIF-2-alpha kinase GCN2] [Gene Type: protein-coding]","LOC658953; TcasGA2_TC009201"]
[934,"NC_007422.5",3258956,"SNV","A","G","Homozygous",24,29,82.76,0.72,21,7,0.25,37.92,28,35,14,17,-0.2,0.99,0.97,"no","G/G","No",1,5.58,"XP_971225.1:c.247A>G","XP_971225.1:p.Ile83Val","LOC659865",659865,null,"659865 [Gene Symbol: LOC659865] [Locus Tag: TcasGA2_TC009612] [Chromosome: LG7] [Map Location: ] [Description: JNK1/MAPK8-associated membrane protein] [Gene Type: protein-coding]","TcasGA2_TC009612; LOC659865"]
[935,"NC_007422.5",3260706,"SNV","T","G","Heterozygous",16,24,66.67,1,8,8,0.5,38.62,16,24,9,13,1.41,0.9,1,"no","G/T","No",1,44.41,"XP_015836878.1:c.529A>C","XP_015836878.1:p.Ser177Arg","LOC659932",659932,null,"659932 [Gene Symbol: LOC659932] [Locus Tag: TcasGA2_TC009192] [Chromosome: LG7] [Map Location: ] [Description: molybdopterin synthase catalytic subunit] [Gene Type: protein-coding]","LOC659932; TcasGA2_TC009192"]
[936,"NC_007422.5",3261005,"SNV","C","T","Homozygous",23,23,100,1,13,10,0.43,36.87,23,23,14,17,null,1,1,"no","T/T","No",1,90.72,"XP_015836878.1:c.280G>A","XP_015836878.1:p.Val94Ile","LOC659932",659932,null,"659932 [Gene Symbol: LOC659932] [Locus Tag: TcasGA2_TC009192] [Chromosome: LG7] [Map Location: ] [Description: molybdopterin synthase catalytic subunit] [Gene Type: protein-coding]","LOC659932; TcasGA2_TC009192"]
[937,"NC_007422.5",3261388,"SNV","T","G","Heterozygous",12,21,57.14,1,8,9,0.47,38,17,28,6,7,1.14,0.78,0.94,"no","G/T","No",1,65.58,"XP_001812142.1:c.215A>C","XP_001812142.1:p.Gln72Pro","LOC100142286",100142286,null,"100142286 [Gene Symbol: LOC100142286] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: molybdopterin synthase sulfur carrier subunit] [Gene Type: protein-coding]","LOC100142286"]
[938,"NC_007422.5",3261406,"SNV","A","C","Heterozygous",10,22,45.45,1,9,9,0.5,36.3,18,32,5,5,-0.69,0.42,0.99,"no","A/C","No",1,79.71,"XP_001812142.1:c.197T>G","XP_001812142.1:p.Val66Gly","LOC100142286",100142286,null,"100142286 [Gene Symbol: LOC100142286] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: molybdopterin synthase sulfur carrier subunit] [Gene Type: protein-coding]","LOC100142286"]
[939,"NC_007422.5",3270862,"SNV","A","G","Homozygous",27,27,100,1,16,14,0.47,38.19,30,30,14,17,null,1,1,"no","G/G","No",1,101.16,"XP_015836825.1:c.[2618T>C]; XP_008195415.1:c.[2678T>C]","XP_015836825.1:p.[Met873Thr]; XP_008195415.1:p.[Met893Thr]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[940,"NC_007422.5",3270876,"SNV","T","A","Homozygous",28,28,100,1,16,17,0.48,38.18,33,33,14,16,null,1,1,"no","A/A","No",1,105.76,"XP_008195415.1:c.[2664A>T]; XP_015836825.1:c.[2604A>T]","XP_008195415.1:p.[Leu888Phe]; XP_015836825.1:p.[Leu868Phe]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[941,"NC_007422.5",3270914,"SNV","C","G","Heterozygous",15,32,46.88,1,7,8,0.47,37.87,15,36,7,10,0.66,0.32,0.9,"no","C/G","No",1,114.88,"XP_008195415.1:c.[2626G>C]; XP_015836825.1:c.[2566G>C]","XP_008195415.1:p.[Gly876Arg]; XP_015836825.1:p.[Gly856Arg]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[942,"NC_007422.5",3270949,"SNV","T","C","Heterozygous",14,22,63.64,1,7,7,0.5,38.43,14,23,8,10,0.85,0.46,1,"no","C/T","No",1,53.39,"XP_015836825.1:c.[2531A>G]; XP_008195415.1:c.[2591A>G]","XP_015836825.1:p.[Asn844Ser]; XP_008195415.1:p.[Asn864Ser]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[943,"NC_007422.5",3272126,"SNV","A","T","Heterozygous",6,22,27.27,1,3,3,0.5,39.5,6,22,4,6,-0.37,0.76,0.68,"no","A/T","No",1,27.94,"XP_015836825.1:c.[1414T>A]; XP_008195415.1:c.[1414T>A]","XP_015836825.1:p.[Phe472Ile]; XP_008195415.1:p.[Phe472Ile]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[944,"NC_007422.5",3288114,"SNV","G","C","Heterozygous",6,21,28.57,1,3,5,0.38,38.83,8,26,6,4,1.48,0.77,1,"no","C/G","No",1,30.55,"XP_015836826.1:c.[2703C>G]; XP_015836827.1:c.[2703C>G]","XP_015836826.1:p.[His901Gln]; XP_015836827.1:p.[His901Gln]","LOC660728",660728,null,"660728 [Gene Symbol: LOC660728] [Locus Tag: TcasGA2_TC009186] [Chromosome: LG7] [Map Location: ] [Description: alpha-mannosidase 2] [Gene Type: protein-coding]","TcasGA2_TC009186; LOC660728"]
[945,"NC_007422.5","3292711^3292712","Insertion","-","TG","Homozygous",31,31,100,1,20,18,0.47,38.34,38,38,22,26,null,1,1,"no","TG/TG","No",1,200,"XP_972081.3:c.[18+21_18+22insTG]; XP_015836834.1:c.[39_40insTG]","XP_015836834.1:p.Tyr14fs","LOC660783",660783,null,"660783 [Gene Symbol: LOC660783] [Locus Tag: TcasGA2_TC009619] [Chromosome: LG7] [Map Location: ] [Description: probable glucosamine 6-phosphate N-acetyltransferase] [Gene Type: protein-coding]","LOC660783; TcasGA2_TC009619"]
[946,"NC_007422.5",3292923,"SNV","G","A","Heterozygous",10,23,43.48,1,2,10,0.17,39.4,12,28,5,7,1.86,0.3,0.52,"no","A/G","No",1,76.19,"XP_015836834.1:c.[202G>A]; XP_972081.3:c.[130G>A]","XP_015836834.1:p.[Gly68Ser]; XP_972081.3:p.[Gly44Ser]","LOC660783",660783,null,"660783 [Gene Symbol: LOC660783] [Locus Tag: TcasGA2_TC009619] [Chromosome: LG7] [Map Location: ] [Description: probable glucosamine 6-phosphate N-acetyltransferase] [Gene Type: protein-coding]","LOC660783; TcasGA2_TC009619"]
[947,"NC_007422.5",3308425,"SNV","T","G","Heterozygous",10,21,47.62,1,4,6,0.4,39.1,10,21,4,7,1.65,0.07,0.81,"no","G/T","No",1,81.82,"XP_008195421.1:c.[724A>C]; XP_015837015.1:c.[724A>C]; XP_015837016.1:c.[724A>C]; XP_972230.2:c.[685A>C]; XP_015837018.1:c.[724A>C]","XP_008195421.1:p.[Thr242Pro]; XP_015837015.1:p.[Thr242Pro]; XP_015837016.1:p.[Thr242Pro]; XP_972230.2:p.[Thr229Pro]; XP_015837018.1:p.[Thr242Pro]","LOC660943",660943,null,"660943 [Gene Symbol: LOC660943] [Locus Tag: TcasGA2_TC009184] [Chromosome: LG7] [Map Location: ] [Description: orexin receptor type 2] [Gene Type: protein-coding]","LOC660943; TcasGA2_TC009184"]
[948,"NC_007422.5",3406948,"SNV","A","G","Heterozygous",6,21,28.57,1,2,4,0.33,35.17,6,21,3,4,-1.67,0.43,0.99,"no","A/G","No",1,31.67,"XP_008195468.1:c.469A>G","XP_008195468.1:p.Asn157Asp","LOC661938",661938,null,"661938 [Gene Symbol: LOC661938] [Locus Tag: TcasGA2_TC009630] [Chromosome: LG7] [Map Location: ] [Description: acidic mammalian chitinase] [Gene Type: protein-coding]","LOC661938; TcasGA2_TC009630"]
[949,"NC_007422.5","3407310..3407313","MNV","GGTA","TACC","Heterozygous",13,21,61.9,1,9,10,0.47,37.02,19,30,6,10,-0.38,0.91,1,"no","complex","No",1,200,"XP_008195468.1:c.787_790delGGTAinsTACC","XP_008195468.1:p.Gly263_Asn264delinsTyrHis","LOC661938",661938,null,"661938 [Gene Symbol: LOC661938] [Locus Tag: TcasGA2_TC009630] [Chromosome: LG7] [Map Location: ] [Description: acidic mammalian chitinase] [Gene Type: protein-coding]","LOC661938; TcasGA2_TC009630"]
[950,"NC_007422.5",3456806,"SNV","A","T","Homozygous",20,20,100,1,13,11,0.46,38.25,24,24,9,13,null,1,1,"no","T/T","No",1,81.69,"XP_008195430.1:c.2839A>T","XP_008195430.1:p.Ile947Phe","LOC662056",662056,null,"662056 [Gene Symbol: LOC662056] [Locus Tag: TcasGA2_TC009632] [Chromosome: LG7] [Map Location: ] [Description: inhibitor of Bruton tyrosine kinase] [Gene Type: protein-coding]","TcasGA2_TC009632; LOC662056"]
[951,"NC_007422.5",3465319,"SNV","A","G","Homozygous",20,20,100,1,6,15,0.29,38.85,21,21,10,12,null,1,1,"no","G/G","No",1,80.09,"XP_008195431.1:c.1646A>G","XP_008195431.1:p.Lys549Arg","LOC662092",662092,null,"662092 [Gene Symbol: LOC662092] [Locus Tag: TcasGA2_TC009633] [Chromosome: LG7] [Map Location: ] [Description: ankyrin repeat and LEM domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC009633; LOC662092"]
[952,"NC_007422.5",3519187,"SNV","G","A","Homozygous",20,20,100,1,9,11,0.45,37.3,20,20,7,13,null,1,1,"no","A/A","No",1,81.69,"XP_008195435.1:c.[1597G>A]; XP_008195436.1:c.[1654G>A]","XP_008195435.1:p.[Ala533Thr]; XP_008195436.1:p.[Ala552Thr]","LOC662416",662416,null,"662416 [Gene Symbol: LOC662416] [Locus Tag: TcasGA2_TC009640] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 608] [Gene Type: protein-coding]","TcasGA2_TC009640; LOC662416"]
[953,"NC_007422.5",3565884,"SNV","A","G","Homozygous",30,30,100,1,18,13,0.42,38.93,31,31,13,19,null,1,1,"no","G/G","No",1,110.18,"XP_001813632.1:c.[601T>C]; XP_008195438.1:c.[547T>C]","XP_001813632.1:p.[Ser201Pro]; XP_008195438.1:p.[Ser183Pro]","LOC100142357",100142357,null,"100142357 [Gene Symbol: LOC100142357] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: spermine oxidase-like] [Gene Type: protein-coding]","LOC100142357"]
[954,"NC_007422.5",3567320,"SNV","C","T","Heterozygous",20,39,51.28,1,8,16,0.33,37.65,24,43,10,12,1.73,0.29,1,"no","C/T","No",1,146.99,"XP_015836785.1:c.649G>A","XP_015836785.1:p.Glu217Lys","LOC107398165",107398165,null,"107398165 [Gene Symbol: LOC107398165] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: spermine oxidase-like] [Gene Type: protein-coding]","LOC107398165"]
[955,"NC_007422.5",3567585,"SNV","T","G","Heterozygous",9,20,45,1,3,8,0.27,39.56,11,22,6,6,-0.76,0.32,0.62,"no","G/T","No",1,72.35,"XP_015836785.1:c.384A>C","XP_015836785.1:p.Glu128Asp","LOC107398165",107398165,null,"107398165 [Gene Symbol: LOC107398165] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: spermine oxidase-like] [Gene Type: protein-coding]","LOC107398165"]
[956,"NC_007422.5",3572471,"SNV","T","C","Homozygous",22,22,100,1,9,16,0.36,36.23,25,25,13,15,null,1,1,"no","C/C","No",1,86.13,"XP_973793.1:c.194T>C","XP_973793.1:p.Leu65Ser","LOC662614",662614,null,"662614 [Gene Symbol: LOC662614] [Locus Tag: TcasGA2_TC009643] [Chromosome: LG7] [Map Location: ] [Description: spermine oxidase] [Gene Type: protein-coding]","LOC662614; TcasGA2_TC009643"]
[957,"NC_007422.5",3581036,"SNV","G","A","Homozygous",28,28,100,1,11,17,0.39,36.18,28,28,11,17,null,1,1,"no","A/A","No",1,105.77,"XP_015837020.1:c.187C>T","XP_015837020.1:p.Leu63Phe","LOC662681",662681,null,"662681 [Gene Symbol: LOC662681] [Locus Tag: TcasGA2_TC009166] [Chromosome: LG7] [Map Location: ] [Description: lysine-specific histone demethylase 1A] [Gene Type: protein-coding]","TcasGA2_TC009166; LOC662681"]
[958,"NC_007422.5","3586300^3586301","Insertion","-","TTCAAC","Homozygous",20,20,100,1,11,9,0.45,38.59,20,20,9,15,null,1,1,"no","TTCAAC/TTCAAC","No",1,200,"XP_015836786.1:c.3099_3100insGTTGAA","XP_015836786.1:p.Thr1033_Lys1034insValGlu","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[959,"NC_007422.5",3589508,"SNV","C","G","Homozygous",20,20,100,1,16,6,0.27,37.4,22,22,13,15,null,1,1,"no","G/G","No",1,80.09,"XP_015836786.1:c.454G>C","XP_015836786.1:p.Asp152His","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[960,"NC_007422.5",3589510,"SNV","T","C","Homozygous",20,20,100,1,16,6,0.27,37.75,22,22,13,15,null,1,1,"no","C/C","No",1,80.12,"XP_015836786.1:c.452A>G","XP_015836786.1:p.Tyr151Cys","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[961,"NC_007422.5",3600847,"SNV","T","C","Homozygous",22,22,100,1,17,7,0.29,37.64,24,24,12,18,null,1,1,"no","C/C","No",1,86.13,"XP_015836787.1:c.80T>C","XP_015836787.1:p.Val27Ala","LOC662911",662911,null,"662911 [Gene Symbol: LOC662911] [Locus Tag: TcasGA2_TC009649] [Chromosome: LG7] [Map Location: ] [Description: HC-toxin synthetase] [Gene Type: protein-coding]","TcasGA2_TC009649; LOC662911"]
[962,"NC_007422.5",3601098,"SNV","G","A","Homozygous",21,21,100,1,16,10,0.38,38.33,26,26,13,17,null,1,1,"no","A/A","No",1,84.7,"XP_015836787.1:c.226G>A","XP_015836787.1:p.Val76Ile","LOC662911",662911,null,"662911 [Gene Symbol: LOC662911] [Locus Tag: TcasGA2_TC009649] [Chromosome: LG7] [Map Location: ] [Description: HC-toxin synthetase] [Gene Type: protein-coding]","TcasGA2_TC009649; LOC662911"]
[963,"NC_007422.5",3621944,"SNV","T","G","Homozygous",24,24,100,1,15,11,0.42,36.25,26,26,11,16,null,1,1,"no","G/G","No",1,92.13,"XP_015837002.1:c.[862A>C]; XP_008195443.1:c.[859A>C]; XP_008195442.1:c.[862A>C]","XP_015837002.1:p.[Lys288Gln]; XP_008195443.1:p.[Lys287Gln]; XP_008195442.1:p.[Lys288Gln]","LOC663050",663050,null,"663050 [Gene Symbol: LOC663050] [Locus Tag: TcasGA2_TC009162] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663050] [Gene Type: protein-coding]","TcasGA2_TC009162; LOC663050"]
[964,"NC_007422.5",3656189,"SNV","G","A","Homozygous",21,21,100,1,15,11,0.42,37,26,26,13,13,null,1,1,"no","A/A","No",1,84.7,"XP_974405.1:c.631G>A","XP_974405.1:p.Ala211Thr","LOC663256",663256,null,"663256 [Gene Symbol: LOC663256] [Locus Tag: TcasGA2_TC009659] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663256] [Gene Type: protein-coding]","LOC663256; TcasGA2_TC009659"]
[965,"NC_007422.5",3656286,"SNV","G","A","Homozygous",22,22,100,1,4,18,0.18,38.55,22,22,12,14,null,1,1,"no","A/A","No",1,87.7,"XP_974405.1:c.728G>A","XP_974405.1:p.Gly243Asp","LOC663256",663256,null,"663256 [Gene Symbol: LOC663256] [Locus Tag: TcasGA2_TC009659] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663256] [Gene Type: protein-coding]","LOC663256; TcasGA2_TC009659"]
[966,"NC_007422.5",3662213,"SNV","T","C","Homozygous",21,21,100,1,15,6,0.29,39.19,21,21,11,13,null,1,1,"no","C/C","No",1,83.12,"XP_974464.1:c.244A>G","XP_974464.1:p.Ile82Val","LOC663316",663316,null,"663316 [Gene Symbol: LOC663316] [Locus Tag: TcasGA2_TC009159] [Chromosome: LG7] [Map Location: ] [Description: ras-like GTP-binding protein rhoA] [Gene Type: protein-coding]","TcasGA2_TC009159; LOC663316"]
[967,"NC_007422.5",3669369,"SNV","T","C","Homozygous",23,23,100,1,8,16,0.33,36.09,24,24,13,12,null,1,1,"no","C/C","No",1,89.14,"XP_008195448.1:c.[107A>G]; XP_974516.2:c.[107A>G]; XP_008195449.1:c.[107A>G]","XP_008195448.1:p.[Asp36Gly]; XP_974516.2:p.[Asp36Gly]; XP_008195449.1:p.[Asp36Gly]","LOC663372",663372,null,"663372 [Gene Symbol: LOC663372] [Locus Tag: TcasGA2_TC009157] [Chromosome: LG7] [Map Location: ] [Description: dystroglycan] [Gene Type: protein-coding]","LOC663372; TcasGA2_TC009157"]
[968,"NC_007422.5",3810526,"SNV","G","A","Homozygous",22,22,100,1,16,7,0.3,37.64,23,23,9,14,null,1,1,"no","A/A","No",1,87.7,"XP_974755.2:c.1346C>T","XP_974755.2:p.Thr449Met","LOC663623",663623,null,"663623 [Gene Symbol: LOC663623] [Locus Tag: TcasGA2_TC009147] [Chromosome: LG7] [Map Location: ] [Description: CCR4-NOT transcription complex subunit 11] [Gene Type: protein-coding]","LOC663623; TcasGA2_TC009147"]
[969,"NC_007422.5",3898283,"SNV","T","C","Homozygous",21,21,100,1,10,12,0.45,37.81,22,22,13,15,null,1,1,"no","C/C","No",1,83.12,"XP_973091.2:c.958A>G","XP_973091.2:p.Ile320Val","LOC661866",661866,null,"661866 [Gene Symbol: LOC661866] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: UDP-glucuronosyltransferase 1-7] [Gene Type: protein-coding]","LOC661866"]
[970,"NC_007422.5",3933996,"SNV","G","T","Homozygous",20,20,100,1,17,8,0.32,35.9,25,25,10,15,null,1,1,"no","T/T","No",1,81.7,"XP_008200179.1:c.[1611G>T]; XP_008200178.1:c.[1611G>T]","XP_008200179.1:p.[Glu537Asp]; XP_008200178.1:p.[Glu537Asp]","LOC660079",660079,null,"660079 [Gene Symbol: LOC660079] [Locus Tag: TcasGA2_TC030765] [Chromosome: LG7] [Map Location: ] [Description: bromodomain adjacent to zinc finger domain protein 1A] [Gene Type: protein-coding]","LOC660079; TcasGA2_TC030765"]
[971,"NC_007422.5",3934178,"SNV","T","C","Homozygous",28,28,100,1,20,14,0.41,37.04,34,34,18,20,null,1,1,"no","C/C","No",1,104.19,"XP_008200179.1:c.[1793T>C]; XP_008200178.1:c.[1793T>C]","XP_008200179.1:p.[Val598Ala]; XP_008200178.1:p.[Val598Ala]","LOC660079",660079,null,"660079 [Gene Symbol: LOC660079] [Locus Tag: TcasGA2_TC030765] [Chromosome: LG7] [Map Location: ] [Description: bromodomain adjacent to zinc finger domain protein 1A] [Gene Type: protein-coding]","LOC660079; TcasGA2_TC030765"]
[972,"NC_007422.5",3989690,"SNV","C","T","Homozygous",20,20,100,1,8,17,0.32,38,25,25,11,14,null,1,1,"no","T/T","No",1,81.69,"XP_008200169.1:c.[7G>A]; XP_970826.2:c.[7G>A]","XP_008200169.1:p.[Glu3Lys]; XP_970826.2:p.[Glu3Lys]","LOC659425",659425,null,"659425 [Gene Symbol: LOC659425] [Locus Tag: TcasGA2_TC015954] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC659425] [Gene Type: protein-coding]","LOC659425; TcasGA2_TC015954"]
[973,"NC_007422.5",3999690,"SNV","A","G","Homozygous",21,21,100,1,4,18,0.18,38.9,22,22,10,12,null,1,1,"no","G/G","No",1,83.1,"XP_008200167.1:c.[1325A>G]; XP_008200166.1:c.[1550A>G]; XP_008200165.1:c.[1730A>G]; XP_970759.2:c.[1292A>G]; XP_008200164.1:c.[1769A>G]; XP_008200163.1:c.[1802A>G]","XP_008200167.1:p.[Lys442Arg]; XP_008200166.1:p.[Lys517Arg]; XP_008200165.1:p.[Lys577Arg]; XP_970759.2:p.[Lys431Arg]; XP_008200164.1:p.[Lys590Arg]; XP_008200163.1:p.[Lys601Arg]","LOC659350",659350,null,"659350 [Gene Symbol: LOC659350] [Locus Tag: TcasGA2_TC015895] [Chromosome: LG7] [Map Location: ] [Description: protein anoxia up-regulated] [Gene Type: protein-coding]","LOC659350; TcasGA2_TC015895"]
[974,"NC_007422.5",4002898,"SNV","A","G","Homozygous",21,23,91.3,1,15,6,0.29,36.1,21,23,9,16,null,0.98,1,"no","G/G","No",1,31.72,"XP_015836796.1:c.505A>G","XP_015836796.1:p.Ile169Val","LOC659210",659210,null,"659210 [Gene Symbol: LOC659210] [Locus Tag: TcasGA2_TC015897] [Chromosome: LG7] [Map Location: ] [Description: G protein-activated inward rectifier potassium channel 4] [Gene Type: protein-coding]","TcasGA2_TC015897; LOC659210"]
[975,"NC_007422.5",4086239,"SNV","T","C","Heterozygous",10,21,47.62,1,9,4,0.31,37.2,13,25,7,9,0.25,0.97,1,"no","C/T","No",1,82.63,"XP_001809235.1:c.1954A>G","XP_001809235.1:p.Ile652Val","LOC100142455",100142455,null,"100142455 [Gene Symbol: LOC100142455] [Locus Tag: TcasGA2_TC015944] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC100142455] [Gene Type: protein-coding]","LOC100142455; TcasGA2_TC015944"]
[976,"NC_007422.5",4089784,"SNV","G","C","Homozygous",21,21,100,1,8,15,0.35,38.33,23,23,13,11,null,1,1,"no","C/C","No",1,83.12,"XP_001809235.1:c.823C>G","XP_001809235.1:p.Arg275Gly","LOC100142455",100142455,null,"100142455 [Gene Symbol: LOC100142455] [Locus Tag: TcasGA2_TC015944] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC100142455] [Gene Type: protein-coding]","LOC100142455; TcasGA2_TC015944"]
[977,"NC_007422.5",4089793,"SNV","T","C","Homozygous",19,21,90.48,1,8,13,0.38,38.21,21,23,12,11,null,1,1,"no","C/C","No",1,25.83,"XP_001809235.1:c.814A>G","XP_001809235.1:p.Thr272Ala","LOC100142455",100142455,null,"100142455 [Gene Symbol: LOC100142455] [Locus Tag: TcasGA2_TC015944] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC100142455] [Gene Type: protein-coding]","LOC100142455; TcasGA2_TC015944"]
[978,"NC_007422.5",4102069,"SNV","G","A","Heterozygous",12,20,60,1,4,9,0.31,36.67,13,21,8,9,-2.31,0.7,1,"no","A/G","No",1,60.04,"XP_966520.1:c.[341G>A]; XP_008200150.1:c.[957+1676C>T]","XP_966520.1:p.Arg114Gln","LOC103314846, LOC657073","103314846 , 657073",null,"103314846 [Gene Symbol: LOC103314846] [Locus Tag: TcasGA2_TC033620] [Chromosome: LG7] [Map Location: ] [Description: cleavage and polyadenylation specificity factor 73] [Gene Type: protein-coding] || 657073 [Gene Symbol: LOC657073] [Locus Tag: TcasGA2_TC015907] [Chromosome: LG7] [Map Location: ] [Description: delta(24)-sterol reductase] [Gene Type: protein-coding]","LOC103314846; TcasGA2_TC033620 || LOC657073; TcasGA2_TC015907"]
[979,"NC_007422.5",4102810,"SNV","T","C","Homozygous",29,29,100,1,15,19,0.44,37.79,34,34,21,24,null,1,1,"no","C/C","No",1,107.2,"XP_008200150.1:c.[957+935A>G]; XP_966520.1:c.[1082T>C]","XP_966520.1:p.Val361Ala","LOC103314846, LOC657073","103314846 , 657073",null,"103314846 [Gene Symbol: LOC103314846] [Locus Tag: TcasGA2_TC033620] [Chromosome: LG7] [Map Location: ] [Description: cleavage and polyadenylation specificity factor 73] [Gene Type: protein-coding] || 657073 [Gene Symbol: LOC657073] [Locus Tag: TcasGA2_TC015907] [Chromosome: LG7] [Map Location: ] [Description: delta(24)-sterol reductase] [Gene Type: protein-coding]","LOC103314846; TcasGA2_TC033620 || LOC657073; TcasGA2_TC015907"]
[980,"NC_007422.5",4119556,"SNV","G","T","Homozygous",31,31,100,1,17,16,0.48,37.03,33,33,14,17,null,1,1,"no","T/T","No",1,114.79,"XP_015836807.1:c.[216C>A]; XP_008200144.1:c.[216C>A]","XP_015836807.1:p.[Asp72Glu]; XP_008200144.1:p.[Asp72Glu]","LOC103314843",103314843,null,"103314843 [Gene Symbol: LOC103314843] [Locus Tag: TcasGA2_TC015939] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314843; TcasGA2_TC015939"]
[981,"NC_007422.5","4147041^4147042","Insertion","-","TG","Heterozygous",5,23,21.74,1,4,3,0.43,36.1,7,29,3,5,-0.75,0.68,1,"no","complex","No",1,200,"XP_968249.1:c.[1175_1176insCA]; XP_008200135.1:c.[1175_1176insCA]; XP_008200132.1:c.[1175_1176insCA]; XP_008200133.1:c.[1175_1176insCA]","XP_968249.1:p.[Ser393fs]; XP_008200135.1:p.[Ser393fs]; XP_008200132.1:p.[Ser393fs]; XP_008200133.1:p.[Ser393fs]","LOC656642",656642,null,"656642 [Gene Symbol: LOC656642] [Locus Tag: TcasGA2_TC033615] [Chromosome: LG7] [Map Location: ] [Description: myosin-11] [Gene Type: protein-coding]","LOC656642; TcasGA2_TC033615"]
[982,"NC_007422.5","4147042^4147043","Insertion","-","T","Heterozygous",5,22,22.73,0.97,4,3,0.43,36,7,28,2,4,-0.71,0.53,1,"no","-/T","No",1,15.68,"XP_008200132.1:c.[1174_1175insA]; XP_008200133.1:c.[1174_1175insA]; XP_008200135.1:c.[1174_1175insA]; XP_968249.1:c.[1174_1175insA]","XP_008200132.1:p.[Leu392fs]; XP_008200133.1:p.[Leu392fs]; XP_008200135.1:p.[Leu392fs]; XP_968249.1:p.[Leu392fs]","LOC656642",656642,null,"656642 [Gene Symbol: LOC656642] [Locus Tag: TcasGA2_TC033615] [Chromosome: LG7] [Map Location: ] [Description: myosin-11] [Gene Type: protein-coding]","LOC656642; TcasGA2_TC033615"]
[983,"NC_007422.5",4148233,"SNV","G","C","Homozygous",22,22,100,1,18,8,0.31,36.91,26,26,15,16,null,1,1,"no","C/C","No",1,86.13,"XP_008200132.1:c.[341C>G]; XP_008200135.1:c.[341C>G]; XP_008200133.1:c.[341C>G]; XP_968249.1:c.[341C>G]","XP_008200132.1:p.[Thr114Ser]; XP_008200135.1:p.[Thr114Ser]; XP_008200133.1:p.[Thr114Ser]; XP_968249.1:p.[Thr114Ser]","LOC656642",656642,null,"656642 [Gene Symbol: LOC656642] [Locus Tag: TcasGA2_TC033615] [Chromosome: LG7] [Map Location: ] [Description: myosin-11] [Gene Type: protein-coding]","LOC656642; TcasGA2_TC033615"]
[984,"NC_007422.5",4152382,"SNV","G","A","Heterozygous",7,33,21.21,0.91,2,6,0.25,37.86,8,36,5,5,0.13,0.22,0.58,"no","A/G","No",1,10.58,"XP_015836869.1:c.[187G>A]; XP_015836868.1:c.[187G>A]; XP_008200131.2:c.[187G>A]; XP_015836867.1:c.[187G>A]","XP_015836869.1:p.[Glu63Lys]; XP_015836868.1:p.[Glu63Lys]; XP_008200131.2:p.[Glu63Lys]; XP_015836867.1:p.[Glu63Lys]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[985,"NC_007422.5",4152406,"SNV","G","A","Heterozygous",8,23,34.78,1,4,4,0.5,39.62,8,28,5,7,1.81,0.29,1,"no","A/G","No",1,50.64,"XP_015836869.1:c.[211G>A]; XP_008200131.2:c.[211G>A]; XP_015836868.1:c.[211G>A]; XP_015836867.1:c.[211G>A]","XP_015836869.1:p.[Glu71Lys]; XP_008200131.2:p.[Glu71Lys]; XP_015836868.1:p.[Glu71Lys]; XP_015836867.1:p.[Glu71Lys]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[986,"NC_007422.5",4152547,"SNV","A","T","Heterozygous",16,32,50,1,12,4,0.25,38.19,16,35,10,12,0.41,0.56,0.85,"no","A/T","No",1,124.66,"XP_015836867.1:c.[352A>T]; XP_008200131.2:c.[352A>T]; XP_015836868.1:c.[352A>T]; XP_015836869.1:c.[352A>T]","XP_015836867.1:p.[Thr118Ser]; XP_008200131.2:p.[Thr118Ser]; XP_015836868.1:p.[Thr118Ser]; XP_015836869.1:p.[Thr118Ser]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[987,"NC_007422.5",4153723,"SNV","G","T","Heterozygous",6,25,24,0.98,4,2,0.33,37.17,6,32,6,6,-0.19,0.5,0.95,"no","G/T","No",1,16.21,"XP_015836868.1:c.[1171G>T]; XP_008200131.2:c.[1171G>T]; XP_015836867.1:c.[1171G>T]; XP_015836869.1:c.[1171G>T]","XP_015836868.1:p.[Val391Leu]; XP_008200131.2:p.[Val391Leu]; XP_015836867.1:p.[Val391Leu]; XP_015836869.1:p.[Val391Leu]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[988,"NC_007422.5",4154817,"SNV","A","T","Heterozygous",16,21,76.19,0.98,6,12,0.33,38.69,18,23,8,10,1.49,0.96,0.99,"no","A/T","No",1,17.9,"XP_015836868.1:c.[2265A>T]; XP_015836867.1:c.[2265A>T]; XP_008200131.2:c.[2265A>T]; XP_015836869.1:c.[2265A>T]","XP_015836868.1:p.[Gln755His]; XP_015836867.1:p.[Gln755His]; XP_008200131.2:p.[Gln755His]; XP_015836869.1:p.[Gln755His]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[989,"NC_007422.5","4155663..4155664","MNV","GG","TT","Heterozygous",8,20,40,1,8,0,0,40,8,23,5,7,3.7,0.08,0.63,"no","complex","No",1,200,"XP_015836868.1:c.[3017_3018delGGinsTT]; XP_015836867.1:c.[3020_3021delGGinsTT]; XP_015836869.1:c.[2924_2925delGGinsTT]; XP_008200131.2:c.[3020_3021delGGinsTT]","XP_015836868.1:p.[Arg1006Ile]; XP_015836867.1:p.[Arg1007Ile]; XP_015836869.1:p.[Arg975Ile]; XP_008200131.2:p.[Arg1007Ile]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[990,"NC_007422.5",4157169,"SNV","T","C","Heterozygous",8,24,33.33,1,2,6,0.25,38.75,8,26,6,8,0.52,0.47,0.95,"no","C/T","No",1,49.04,"XP_968023.1:c.2447A>G","XP_968023.1:p.Gln816Arg","LOC656394",656394,null,"656394 [Gene Symbol: LOC656394] [Locus Tag: TcasGA2_TC015935] [Chromosome: LG7] [Map Location: ] [Description: exportin-2] [Gene Type: protein-coding]","LOC656394; TcasGA2_TC015935"]
[991,"NC_007422.5",4157257,"SNV","C","G","Heterozygous",7,21,33.33,1,6,3,0.33,37,9,25,5,7,-0.41,0.95,1,"no","C/G","No",1,43.37,"XP_968023.1:c.2359G>C","XP_968023.1:p.Val787Leu","LOC656394",656394,null,"656394 [Gene Symbol: LOC656394] [Locus Tag: TcasGA2_TC015935] [Chromosome: LG7] [Map Location: ] [Description: exportin-2] [Gene Type: protein-coding]","LOC656394; TcasGA2_TC015935"]
[992,"NC_007422.5",4157434,"SNV","C","T","Heterozygous",5,21,23.81,0.98,3,3,0.5,36.8,6,24,4,4,-0.91,0.97,1,"no","C/T","No",1,18.1,"XP_968023.1:c.2182G>A","XP_968023.1:p.Gly728Ser","LOC656394",656394,null,"656394 [Gene Symbol: LOC656394] [Locus Tag: TcasGA2_TC015935] [Chromosome: LG7] [Map Location: ] [Description: exportin-2] [Gene Type: protein-coding]","LOC656394; TcasGA2_TC015935"]
[993,"NC_007422.5",4205230,"SNV","C","T","Homozygous",18,21,85.71,0.81,10,11,0.48,35.67,21,24,9,12,null,0.93,1,"no","T/T","No",1,7.28,"XP_008200121.1:c.1291G>A","XP_008200121.1:p.Ala431Thr","LOC655726",655726,null,"655726 [Gene Symbol: LOC655726] [Locus Tag: TcasGA2_TC033610] [Chromosome: LG7] [Map Location: ] [Description: GPI ethanolamine phosphate transferase 3] [Gene Type: protein-coding]","LOC655726; TcasGA2_TC033610"]
[994,"NC_007422.5",4206276,"SNV","G","C","Homozygous",20,20,100,1,12,9,0.43,37.5,21,21,9,16,null,1,1,"no","C/C","No",1,80.11,"XP_008200121.1:c.399C>G","XP_008200121.1:p.Asp133Glu","LOC655726",655726,null,"655726 [Gene Symbol: LOC655726] [Locus Tag: TcasGA2_TC033610] [Chromosome: LG7] [Map Location: ] [Description: GPI ethanolamine phosphate transferase 3] [Gene Type: protein-coding]","LOC655726; TcasGA2_TC033610"]
[995,"NC_007422.5","4382101..4382102","MNV","GA","AG","Homozygous",25,25,100,1,20,8,0.29,36.9,28,28,15,19,null,1,1,"no","AG/AG","No",1,200,"XP_966823.2:c.938_939delGAinsAG","XP_966823.2:p.Arg313Lys","LOC655214",655214,null,"655214 [Gene Symbol: LOC655214] [Locus Tag: TcasGA2_TC009681] [Chromosome: LG7] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","LOC655214; TcasGA2_TC009681"]
[996,"NC_007422.5",4618459,"SNV","A","T","Homozygous",24,24,100,1,14,13,0.48,38.67,27,27,14,15,null,1,1,"no","T/T","No",1,93.73,"XP_015836789.1:c.2630A>T","XP_015836789.1:p.Tyr877Phe","LOC655171",655171,null,"655171 [Gene Symbol: LOC655171] [Locus Tag: TcasGA2_TC009690] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655171] [Gene Type: protein-coding]","TcasGA2_TC009690; LOC655171"]
[997,"NC_007422.5",4618497,"SNV","A","C","Homozygous",22,22,100,1,9,15,0.38,38.55,24,24,12,14,null,1,1,"no","C/C","No",1,86.13,"XP_015836789.1:c.2668A>C","XP_015836789.1:p.Lys890Gln","LOC655171",655171,null,"655171 [Gene Symbol: LOC655171] [Locus Tag: TcasGA2_TC009690] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655171] [Gene Type: protein-coding]","TcasGA2_TC009690; LOC655171"]
[998,"NC_007422.5",4619389,"SNV","C","A","Homozygous",22,22,100,1,11,12,0.48,37.64,23,23,13,16,null,1,1,"no","A/A","No",1,87.71,"XP_015836789.1:c.3460C>A","XP_015836789.1:p.His1154Asn","LOC655171",655171,null,"655171 [Gene Symbol: LOC655171] [Locus Tag: TcasGA2_TC009690] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655171] [Gene Type: protein-coding]","TcasGA2_TC009690; LOC655171"]
[999,"NC_007422.5",4620536,"SNV","T","C","Heterozygous",12,29,41.38,1,8,6,0.43,37.08,14,31,8,10,-1.53,0.7,1,"no","C/T","No",1,86.21,"XP_967268.2:c.560T>C","XP_967268.2:p.Val187Ala","LOC655615",655615,null,"655615 [Gene Symbol: LOC655615] [Locus Tag: TcasGA2_TC009692] [Chromosome: LG7] [Map Location: ] [Description: acetylcholinesterase] [Gene Type: protein-coding]","LOC655615; TcasGA2_TC009692"]
[1000,"NC_007422.5",4624100,"SNV","T","C","Homozygous",23,23,100,1,15,9,0.38,37.78,24,24,11,17,null,1,1,"no","C/C","No",1,89.14,"XP_008195484.1:c.986T>C","XP_008195484.1:p.Val329Ala","LOC655695",655695,null,"655695 [Gene Symbol: LOC655695] [Locus Tag: TcasGA2_TC009693] [Chromosome: LG7] [Map Location: ] [Description: acetylcholinesterase] [Gene Type: protein-coding]","LOC655695; TcasGA2_TC009693"]
[1001,"NC_007422.5",4624430,"SNV","C","T","Homozygous",20,20,100,1,8,12,0.4,39.25,20,20,11,13,null,1,1,"no","T/T","No",1,81.69,"XP_008195484.1:c.1264C>T","XP_008195484.1:p.Leu422Phe","LOC655695",655695,null,"655695 [Gene Symbol: LOC655695] [Locus Tag: TcasGA2_TC009693] [Chromosome: LG7] [Map Location: ] [Description: acetylcholinesterase] [Gene Type: protein-coding]","LOC655695; TcasGA2_TC009693"]
[1002,"NC_007422.5","4648616..4648617","MNV","AT","GC","Heterozygous",20,44,45.45,1,19,7,0.27,37.82,26,53,18,17,-0.03,0.81,0.59,"no","complex","No",1,200,"XP_015836905.1:c.167_168delATinsGC","XP_015836905.1:p.Asn56Ser","LOC107398188",107398188,null,"107398188 [Gene Symbol: LOC107398188] [Locus Tag: TcasGA2_TC033628] [Chromosome: LG7] [Map Location: ] [Description: keratin-associated protein 5-7-like] [Gene Type: protein-coding]","LOC107398188; TcasGA2_TC033628"]
[1003,"NC_007422.5",4648622,"SNV","A","G","Heterozygous",21,44,47.73,1,18,9,0.33,37.43,27,52,17,14,-1.02,0.5,0.7,"no","A/G","No",1,156.54,"XP_015836905.1:c.173A>G","XP_015836905.1:p.Asn58Ser","LOC107398188",107398188,null,"107398188 [Gene Symbol: LOC107398188] [Locus Tag: TcasGA2_TC033628] [Chromosome: LG7] [Map Location: ] [Description: keratin-associated protein 5-7-like] [Gene Type: protein-coding]","LOC107398188; TcasGA2_TC033628"]
[1004,"NC_007422.5",4667892,"SNV","T","G","Homozygous",26,26,100,1,22,7,0.24,37.88,29,29,15,19,null,1,1,"no","G/G","No",1,98.15,"XP_968687.1:c.305A>C","XP_968687.1:p.Tyr102Ser","LOC657115",657115,null,"657115 [Gene Symbol: LOC657115] [Locus Tag: TcasGA2_TC009129] [Chromosome: LG7] [Map Location: ] [Description: microsomal glutathione S-transferase 1] [Gene Type: protein-coding]","TcasGA2_TC009129; LOC657115"]
[1005,"NC_007422.5",4667921,"SNV","C","A","Homozygous",22,22,100,1,15,11,0.42,36.05,26,26,14,16,null,1,1,"no","A/A","No",1,87.71,"XP_968687.1:c.276G>T","XP_968687.1:p.Trp92Cys","LOC657115",657115,null,"657115 [Gene Symbol: LOC657115] [Locus Tag: TcasGA2_TC009129] [Chromosome: LG7] [Map Location: ] [Description: microsomal glutathione S-transferase 1] [Gene Type: protein-coding]","TcasGA2_TC009129; LOC657115"]
[1006,"NC_007422.5",4708338,"SNV","A","G","Homozygous",21,21,100,1,14,7,0.33,38.95,21,21,15,15,null,1,1,"no","G/G","No",1,83.1,"XP_969201.1:c.1562A>G","XP_969201.1:p.Asn521Ser","LOC657661",657661,null,"657661 [Gene Symbol: LOC657661] [Locus Tag: TcasGA2_TC009707] [Chromosome: LG7] [Map Location: ] [Description: methionine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC657661; TcasGA2_TC009707"]
[1007,"NC_007422.5",4717206,"SNV","T","A","Homozygous",22,22,100,1,10,16,0.38,37,26,26,16,12,null,1,1,"no","A/A","No",1,87.72,"XP_008195511.1:c.1222A>T","XP_008195511.1:p.Ser408Cys","LOC657816",657816,null,"657816 [Gene Symbol: LOC657816] [Locus Tag: TcasGA2_TC033638] [Chromosome: LG7] [Map Location: ] [Description: leucine-rich repeat-containing protein 49] [Gene Type: protein-coding]","LOC657816; TcasGA2_TC033638"]
[1008,"NC_007422.5",4722549,"SNV","C","T","Homozygous",20,20,100,1,4,16,0.2,36.05,20,20,7,9,null,1,1,"no","T/T","No",1,81.7,"XP_969418.2:c.73G>A","XP_969418.2:p.Ala25Thr","LOC657898",657898,null,"657898 [Gene Symbol: LOC657898] [Locus Tag: TcasGA2_TC033639] [Chromosome: LG7] [Map Location: ] [Description: KAT8 regulatory NSL complex subunit 2] [Gene Type: protein-coding]","LOC657898; TcasGA2_TC033639"]
[1009,"NC_007422.5",4804387,"SNV","G","A","Homozygous",22,22,100,1,4,20,0.17,35.59,24,24,9,11,null,1,1,"no","A/A","No",1,87.7,"XP_015836986.1:c.[1100C>T]; XP_969857.1:c.[1100C>T]","XP_015836986.1:p.[Ala367Val]; XP_969857.1:p.[Ala367Val]","LOC658370",658370,null,"658370 [Gene Symbol: LOC658370] [Locus Tag: TcasGA2_TC009118] [Chromosome: LG7] [Map Location: ] [Description: putative ferric-chelate reductase 1 homolog] [Gene Type: protein-coding]","LOC658370; TcasGA2_TC009118"]
[1010,"NC_007422.5",4818700,"SNV","T","G","Homozygous",22,22,100,1,13,10,0.43,38.91,23,23,12,16,null,1,1,"no","G/G","No",1,86.11,"XP_008195517.1:c.[973A>C]; XP_008195516.1:c.[1000A>C]","XP_008195517.1:p.[Lys325Gln]; XP_008195516.1:p.[Lys334Gln]","LOC658443",658443,null,"658443 [Gene Symbol: LOC658443] [Locus Tag: TcasGA2_TC033642] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658443] [Gene Type: protein-coding]","TcasGA2_TC033642; LOC658443"]
[1011,"NC_007422.5",4844612,"SNV","A","T","Homozygous",21,21,100,1,7,15,0.32,38.05,22,22,11,14,null,1,1,"no","T/T","No",1,84.7,"XP_970457.1:c.415T>A","XP_970457.1:p.Cys139Ser","LOC659025",659025,null,"659025 [Gene Symbol: LOC659025] [Locus Tag: TcasGA2_TC009114] [Chromosome: LG7] [Map Location: ] [Description: RING finger protein nhl-1] [Gene Type: protein-coding]","LOC659025; TcasGA2_TC009114"]
[1012,"NC_007422.5",4861069,"SNV","C","T","Homozygous",20,20,100,1,11,9,0.45,37.5,20,20,9,13,null,1,1,"no","T/T","No",1,81.69,"XP_008195521.2:c.268G>A","XP_008195521.2:p.Val90Ile","LOC103313611",103313611,null,"103313611 [Gene Symbol: LOC103313611] [Locus Tag: TcasGA2_TC030549] [Chromosome: LG7] [Map Location: ] [Description: protein-cysteine N-palmitoyltransferase Rasp] [Gene Type: protein-coding]","TcasGA2_TC030549; LOC103313611"]
[1013,"NC_007422.5",4874387,"SNV","G","C","Homozygous",20,20,100,1,11,13,0.46,38.6,24,24,11,13,null,1,1,"no","C/C","No",1,80.12,"XP_015836813.1:c.983G>C","XP_015836813.1:p.Gly328Ala","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1014,"NC_007422.5",4875264,"SNV","T","A","Homozygous",25,25,100,1,18,9,0.33,35.24,27,27,11,15,null,1,1,"no","A/A","No",1,96.74,"XP_015836813.1:c.1763T>A","XP_015836813.1:p.Leu588*","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1015,"NC_007422.5",4875534,"SNV","T","A","Homozygous",21,21,100,1,5,17,0.23,40.24,22,22,12,13,null,1,1,"no","A/A","No",1,84.69,"XP_015836813.1:c.1985T>A","XP_015836813.1:p.Leu662*","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1016,"NC_007422.5",4877226,"SNV","G","A","Homozygous",20,20,100,1,13,8,0.38,38.5,21,21,10,14,null,1,1,"no","A/A","No",1,81.68,"XP_015836813.1:c.3677G>A","XP_015836813.1:p.Cys1226Tyr","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1017,"NC_007422.5",4877238,"SNV","C","T","Homozygous",20,20,100,1,14,8,0.36,38.5,22,22,8,15,null,1,1,"no","T/T","No",1,81.7,"XP_015836813.1:c.3689C>T","XP_015836813.1:p.Thr1230Ile","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1018,"NC_007422.5",4877637,"SNV","G","A","Homozygous",24,24,100,1,18,8,0.31,38.62,26,26,12,14,null,1,1,"no","A/A","No",1,93.72,"XP_015836813.1:c.4088G>A","XP_015836813.1:p.Arg1363Gln","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1019,"NC_007422.5",4877658,"SNV","T","C","Homozygous",35,35,100,1,25,19,0.43,36.71,44,44,20,22,null,1,1,"no","C/C","No",1,125.25,"XP_015836813.1:c.4109T>C","XP_015836813.1:p.Ile1370Thr","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1020,"NC_007422.5",4878657,"SNV","C","T","Homozygous",20,20,100,1,14,7,0.33,39.4,21,21,11,13,null,1,1,"no","T/T","No",1,81.69,"XP_015836813.1:c.5108C>T","XP_015836813.1:p.Ser1703Leu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1021,"NC_007422.5",4880028,"SNV","A","C","Homozygous",20,20,100,1,16,9,0.36,37.6,25,25,12,15,null,1,1,"no","C/C","No",1,80.12,"XP_015836813.1:c.6479A>C","XP_015836813.1:p.Glu2160Ala","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1022,"NC_007422.5",4880064,"SNV","T","C","Homozygous",23,23,100,1,18,8,0.31,37.04,26,26,16,17,null,1,1,"no","C/C","No",1,89.14,"XP_015836813.1:c.6515T>C","XP_015836813.1:p.Leu2172Pro","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1023,"NC_007422.5",4880277,"SNV","C","T","Homozygous",21,21,100,1,8,16,0.33,38.19,24,24,11,14,null,1,1,"no","T/T","No",1,84.7,"XP_015836813.1:c.6728C>T","XP_015836813.1:p.Thr2243Ile","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1024,"NC_007422.5",4880667,"SNV","C","T","Homozygous",23,23,100,1,14,11,0.44,37.39,25,25,17,14,null,1,1,"no","T/T","No",1,90.72,"XP_015836813.1:c.7118C>T","XP_015836813.1:p.Thr2373Ile","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1025,"NC_007422.5",4880682,"SNV","C","T","Homozygous",23,23,100,1,14,13,0.48,37.65,27,27,17,15,null,1,1,"no","T/T","No",1,90.72,"XP_015836813.1:c.7133C>T","XP_015836813.1:p.Ser2378Leu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1026,"NC_007422.5",4880751,"SNV","G","T","Homozygous",21,21,100,1,12,9,0.43,39.76,21,21,15,20,null,1,1,"no","T/T","No",1,84.7,"XP_015836813.1:c.7202G>T","XP_015836813.1:p.Arg2401Leu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1027,"NC_007422.5",4880934,"SNV","G","C","Homozygous",20,20,100,1,16,6,0.27,38.45,22,22,9,13,null,1,1,"no","C/C","No",1,80.12,"XP_015836813.1:c.7385G>C","XP_015836813.1:p.Arg2462Pro","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1028,"NC_007422.5",4880946,"SNV","T","A","Homozygous",22,22,100,1,17,7,0.29,37.86,24,24,10,15,null,1,1,"no","A/A","No",1,87.71,"XP_015836813.1:c.7397T>A","XP_015836813.1:p.Leu2466Gln","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1029,"NC_007422.5",4881135,"SNV","T","C","Homozygous",20,20,100,1,11,11,0.5,38.4,22,22,9,13,null,1,1,"no","C/C","No",1,80.12,"XP_015836813.1:c.7586T>C","XP_015836813.1:p.Ile2529Thr","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1030,"NC_007422.5",4881504,"SNV","G","A","Homozygous",23,23,100,1,12,12,0.5,38,24,24,17,18,null,1,1,"no","A/A","No",1,90.72,"XP_015836813.1:c.7955G>A","XP_015836813.1:p.Arg2652Lys","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1031,"NC_007422.5",4884642,"SNV","G","A","Homozygous",25,25,100,1,12,14,0.46,35.92,26,26,15,15,null,1,1,"no","A/A","No",1,96.74,"XP_015836813.1:c.11093G>A","XP_015836813.1:p.Arg3698Lys","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1032,"NC_007422.5",4884681,"SNV","T","C","Homozygous",30,30,100,1,18,15,0.45,38,33,33,16,19,null,1,1,"no","C/C","No",1,110.21,"XP_015836813.1:c.11132T>C","XP_015836813.1:p.Ile3711Thr","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1033,"NC_007422.5",4884693,"SNV","C","T","Homozygous",22,22,100,1,12,14,0.46,38.14,26,26,12,16,null,1,1,"no","T/T","No",1,87.71,"XP_015836813.1:c.11144C>T","XP_015836813.1:p.Ser3715Leu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1034,"NC_007422.5",4884720,"SNV","A","C","Homozygous",20,20,100,1,8,15,0.35,37.8,23,23,11,14,null,1,1,"no","C/C","No",1,80.12,"XP_015836813.1:c.11171A>C","XP_015836813.1:p.Glu3724Ala","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1035,"NC_007422.5",4884891,"SNV","T","C","Homozygous",25,25,100,1,8,19,0.3,36.12,27,27,12,17,null,1,1,"no","C/C","No",1,95.16,"XP_015836813.1:c.11342T>C","XP_015836813.1:p.Leu3781Pro","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1036,"NC_007422.5",4890767,"SNV","T","C","Homozygous",26,26,100,1,18,13,0.42,36.88,31,31,14,22,null,1,1,"no","C/C","No",1,98.17,"XP_015836816.1:c.[542T>C]; XP_015836820.1:c.[512T>C]; XP_015836818.1:c.[527T>C]; XP_015836815.1:c.[557T>C]; XP_015836819.1:c.[527T>C]; XP_015836817.1:c.[527T>C]","XP_015836816.1:p.[Val181Ala]; XP_015836820.1:p.[Val171Ala]; XP_015836818.1:p.[Val176Ala]; XP_015836815.1:p.[Val186Ala]; XP_015836819.1:p.[Val176Ala]; XP_015836817.1:p.[Val176Ala]","LOC659661, LOC659733","659661 , 659733",null,"659661 [Gene Symbol: LOC659661] [Locus Tag: TcasGA2_TC009110] [Chromosome: LG7] [Map Location: ] [Description: trimeric intracellular cation channel type B] [Gene Type: protein-coding] || 659733 [Gene Symbol: LOC659733] [Locus Tag: TcasGA2_TC009720] [Chromosome: LG7] [Map Location: ] [Description: putative glycerol kinase 5] [Gene Type: protein-coding]","LOC659661; TcasGA2_TC009110 || LOC659733; TcasGA2_TC009720"]
[1037,"NC_007422.5","4891588^4891589","Insertion","-","C","Homozygous",21,21,100,1,9,13,0.41,38.95,22,22,12,16,null,1,1,"no","C/C","No",1,83.13,"XP_015836817.1:c.[1201_1202insC]; XP_015836820.1:c.[1186_1187insC]; XP_015836815.1:c.[1231_1232insC]; XP_015836819.1:c.[1201_1202insC]; XP_015836818.1:c.[1201_1202insC]; XP_015836816.1:c.[1216_1217insC]","XP_015836817.1:p.[Thr402fs]; XP_015836820.1:p.[Thr397fs]; XP_015836815.1:p.[Thr412fs]; XP_015836819.1:p.[Thr402fs]; XP_015836818.1:p.[Thr402fs]; XP_015836816.1:p.[Thr407fs]","LOC659661, LOC659733","659661 , 659733",null,"659661 [Gene Symbol: LOC659661] [Locus Tag: TcasGA2_TC009110] [Chromosome: LG7] [Map Location: ] [Description: trimeric intracellular cation channel type B] [Gene Type: protein-coding] || 659733 [Gene Symbol: LOC659733] [Locus Tag: TcasGA2_TC009720] [Chromosome: LG7] [Map Location: ] [Description: putative glycerol kinase 5] [Gene Type: protein-coding]","LOC659661; TcasGA2_TC009110 || LOC659733; TcasGA2_TC009720"]
[1038,"NC_007422.5",4891593,"Deletion","T","-","Homozygous",21,21,100,1,9,13,0.41,37.9,22,22,12,16,null,1,1,"no","-/-","No",1,93.72,"XP_015836816.1:c.[1221delT]; XP_015836819.1:c.[1206delT]; XP_015836815.1:c.[1236delT]; XP_015836817.1:c.[1206delT]; XP_015836818.1:c.[1206delT]; XP_015836820.1:c.[1191delT]","XP_015836816.1:p.[Asn409fs]; XP_015836819.1:p.[Asn404fs]; XP_015836815.1:p.[Asn414fs]; XP_015836817.1:p.[Asn404fs]; XP_015836818.1:p.[Asn404fs]; XP_015836820.1:p.[Asn399fs]","LOC659661, LOC659733","659661 , 659733",null,"659661 [Gene Symbol: LOC659661] [Locus Tag: TcasGA2_TC009110] [Chromosome: LG7] [Map Location: ] [Description: trimeric intracellular cation channel type B] [Gene Type: protein-coding] || 659733 [Gene Symbol: LOC659733] [Locus Tag: TcasGA2_TC009720] [Chromosome: LG7] [Map Location: ] [Description: putative glycerol kinase 5] [Gene Type: protein-coding]","LOC659661; TcasGA2_TC009110 || LOC659733; TcasGA2_TC009720"]
[1039,"NC_007422.5",4945042,"SNV","A","G","Homozygous",28,28,100,1,15,14,0.48,36.25,29,29,20,19,null,1,1,"no","G/G","No",1,104.16,"XP_008195544.1:c.[931A>G]; XP_015836900.1:c.[931A>G]; XP_008195542.1:c.[931A>G]","XP_008195544.1:p.[Ile311Val]; XP_015836900.1:p.[Ile311Val]; XP_008195542.1:p.[Ile311Val]","LOC660371",660371,null,"660371 [Gene Symbol: LOC660371] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: neuronal acetylcholine receptor subunit beta-3-like] [Gene Type: protein-coding]","LOC660371"]
[1040,"NC_007422.5",4980990,"SNV","A","G","Homozygous",20,20,100,1,13,16,0.45,37.7,29,29,10,17,null,1,1,"no","G/G","No",1,80.09,"XP_015836799.1:c.[11T>C]; XP_008195491.1:c.[11T>C]","XP_015836799.1:p.[Val4Ala]; XP_008195491.1:p.[Val4Ala]","LOC103313598",103313598,null,"103313598 [Gene Symbol: LOC103313598] [Locus Tag: TcasGA2_TC009104] [Chromosome: LG7] [Map Location: ] [Description: odorant receptor 198] [Gene Type: protein-coding]","Or198; TcasGA2_TC009104; LOC103313598"]
[1041,"NC_007422.5",4985522,"SNV","G","T","Heterozygous",16,20,80,0.88,1,15,0.06,38.69,16,20,7,8,-1.13,0.78,0.6,"no","G/T","No",1,9.06,"XP_972133.2:c.517G>T","XP_972133.2:p.Ala173Ser","LOC660837",660837,null,"660837 [Gene Symbol: LOC660837] [Locus Tag: TcasGA2_TC009730] [Chromosome: LG7] [Map Location: ] [Description: ATP-binding cassette sub-family B member 8, mitochondrial] [Gene Type: protein-coding]","LOC660837; TcasGA2_TC009730"]
[1042,"NC_007422.5",5363231,"SNV","G","A","Homozygous",23,23,100,1,15,11,0.42,38.04,26,26,11,16,null,1,1,"no","A/A","No",1,90.72,"XP_008192724.1:c.55C>T","XP_008192724.1:p.Pro19Ser","LOC103312835",103312835,null,"103312835 [Gene Symbol: LOC103312835] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable methyltransferase-like protein 15 homolog] [Gene Type: protein-coding]","LOC103312835"]
[1043,"NC_007422.5",5363282,"SNV","G","A","Homozygous",23,23,100,1,11,13,0.46,37.3,24,24,12,17,null,1,1,"no","A/A","No",1,90.71,"XP_008192724.1:c.4C>T","XP_008192724.1:p.Leu2Phe","LOC103312835",103312835,null,"103312835 [Gene Symbol: LOC103312835] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable methyltransferase-like protein 15 homolog] [Gene Type: protein-coding]","LOC103312835"]
[1044,"NC_007422.5",6216552,"SNV","C","T","Homozygous",20,20,100,1,16,9,0.36,37.05,25,25,11,15,null,1,1,"no","T/T","No",1,81.69,"XP_008193789.1:c.[136-17745G>A]; XP_008193788.1:c.[136C>T]; XP_008193787.1:c.[142C>T]; XP_008193790.1:c.[19-17745G>A]; XP_015836940.1:c.[136-17745G>A]; XP_015836937.1:c.[136-17745G>A]; XP_015836939.1:c.[136-17745G>A]; XP_015836938.1:c.[82-17745G>A]","XP_008193788.1:p.[Arg46*]; XP_008193787.1:p.[Arg48*]","LOC103313127, LOC103313126","103313127 , 103313126",null,"103313127 [Gene Symbol: LOC103313127] [Locus Tag: TcasGA2_TC014523] [Chromosome: LG7] [Map Location: ] [Description: transcriptional-regulating factor 1] [Gene Type: protein-coding] || 103313126 [Gene Symbol: LOC103313126] [Locus Tag: TcasGA2_TC013289] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313126] [Gene Type: protein-coding]","LOC103313127; TcasGA2_TC014523 || LOC103313126; TcasGA2_TC013289"]
[1045,"NC_007422.5",6392234,"SNV","G","T","Heterozygous",6,23,26.09,0.99,6,0,0,39,6,25,1,6,0.88,0.12,0.19,"no","G/T","No",1,21.71,"XP_008193783.1:c.4042G>T","XP_008193783.1:p.Glu1348*","LOC660716",660716,null,"660716 [Gene Symbol: LOC660716] [Locus Tag: TcasGA2_TC013292] [Chromosome: LG7] [Map Location: ] [Description: proteasome activator complex subunit 4] [Gene Type: protein-coding]","LOC660716; PSME4; TcasGA2_TC013292"]
[1046,"NC_007422.5",6530637,"SNV","A","G","Homozygous",20,20,100,1,12,12,0.5,37.55,24,24,12,14,null,1,1,"no","G/G","No",1,80.09,"XP_008193779.1:c.[1028A>G]; XP_008193778.1:c.[1028A>G]","XP_008193779.1:p.[Lys343Arg]; XP_008193778.1:p.[Lys343Arg]","LOC659723",659723,null,"659723 [Gene Symbol: LOC659723] [Locus Tag: TcasGA2_TC013301] [Chromosome: LG7] [Map Location: ] [Description: transcriptional regulator ATRX homolog] [Gene Type: protein-coding]","TcasGA2_TC013301; LOC659723"]
[1047,"NC_007422.5",6530646,"SNV","A","C","Homozygous",21,21,100,1,13,12,0.48,37.81,25,25,13,14,null,1,1,"no","C/C","No",1,83.12,"XP_008193779.1:c.[1037A>C]; XP_008193778.1:c.[1037A>C]","XP_008193779.1:p.[Tyr346Ser]; XP_008193778.1:p.[Tyr346Ser]","LOC659723",659723,null,"659723 [Gene Symbol: LOC659723] [Locus Tag: TcasGA2_TC013301] [Chromosome: LG7] [Map Location: ] [Description: transcriptional regulator ATRX homolog] [Gene Type: protein-coding]","TcasGA2_TC013301; LOC659723"]
[1048,"NC_007422.5",6571035,"SNV","G","A","Homozygous",21,21,100,1,15,8,0.35,38.76,23,23,13,13,null,1,1,"no","A/A","No",1,84.69,"XP_008195366.2:c.1040C>T","XP_008195366.2:p.Pro347Leu","LOC661429",661429,null,"661429 [Gene Symbol: LOC661429] [Locus Tag: TcasGA2_TC009093] [Chromosome: LG7] [Map Location: ] [Description: transmembrane protease serine 9] [Gene Type: protein-coding]","TcasGA2_TC009093; LOC661429"]
[1049,"NC_007422.5",6571051,"SNV","T","C","Homozygous",22,22,100,1,15,9,0.38,37.45,24,24,14,14,null,1,1,"no","C/C","No",1,86.13,"XP_008195366.2:c.1024A>G","XP_008195366.2:p.Ile342Val","LOC661429",661429,null,"661429 [Gene Symbol: LOC661429] [Locus Tag: TcasGA2_TC009093] [Chromosome: LG7] [Map Location: ] [Description: transmembrane protease serine 9] [Gene Type: protein-coding]","TcasGA2_TC009093; LOC661429"]
[1050,"NC_007422.5",6656509,"SNV","G","T","Homozygous",22,22,100,1,12,10,0.45,38.18,22,22,9,14,null,1,1,"no","T/T","No",1,87.71,"XP_015837037.1:c.1435C>A","XP_015837037.1:p.His479Asn","LOC661733",661733,null,"661733 [Gene Symbol: LOC661733] [Locus Tag: TcasGA2_TC009087] [Chromosome: LG7] [Map Location: ] [Description: ankyrin repeat domain-containing protein 12] [Gene Type: protein-coding]","LOC661733; TcasGA2_TC009087"]
[1051,"NC_007422.5",6787107,"SNV","G","C","Homozygous",24,24,100,1,6,18,0.25,37.46,24,24,13,14,null,1,1,"no","C/C","No",1,92.15,"XP_008199980.1:c.[513+14707C>G]; XP_008199973.1:c.[195C>G]","XP_008199973.1:p.Asp65Glu","LOC657927, LOC103314807","657927 , 103314807",null,"657927 [Gene Symbol: LOC657927] [Locus Tag: TcasGA2_TC016381] [Chromosome: LG7] [Map Location: ] [Description: dynein regulatory complex subunit 7] [Gene Type: protein-coding] || 103314807 [Gene Symbol: LOC103314807] [Locus Tag: TcasGA2_TC016383] [Chromosome: LG7] [Map Location: ] [Description: protein distal antenna] [Gene Type: protein-coding]","LOC657927; TcasGA2_TC016381 || dan; LOC103314807; TcasGA2_TC016383"]
[1052,"NC_007422.5",7196118,"SNV","A","G","Homozygous",20,20,100,1,14,8,0.36,38.4,22,22,14,14,null,1,1,"no","G/G","No",1,80.09,"XP_008199730.2:c.3329T>C","XP_008199730.2:p.Leu1110Ser","LOC103314743",103314743,null,"103314743 [Gene Symbol: LOC103314743] [Locus Tag: ] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: sodium/hydrogen exchanger 10-like] [Gene Type: protein-coding]","LOC103314743"]
[1053,"NC_007422.5",7295433,"SNV","C","T","Homozygous",21,21,100,1,15,6,0.29,38.05,21,21,15,16,null,1,1,"no","T/T","No",1,84.7,"XP_015837170.1:c.[8821G>A]; XP_015837183.1:c.[8821G>A]; XP_008199741.1:c.[8644G>A]; XP_015837174.1:c.[8821G>A]; XP_015837192.1:c.[8821G>A]; XP_015837195.1:c.[4690G>A]; XP_015837188.1:c.[8821G>A]; XP_015837187.1:c.[8641G>A]; XP_015837177.1:c.[8719G>A]; XP_015837173.1:c.[8746G>A]; XP_015837180.1:c.[8707G>A]; XP_015837171.1:c.[8767G>A]; XP_015837191.1:c.[8617G>A]; XP_015837167.1:c.[8803G>A]; XP_015837185.1:c.[8821G>A]; XP_015837166.1:c.[8821G>A]; XP_015837168.1:c.[8797G>A]; XP_015837176.1:c.[8728G>A]; XP_008199749.1:c.[8617G>A]; XP_015837175.1:c.[8743G>A]; XP_015837194.1:c.[8821G>A]; XP_015837179.1:c.[8821G>A]; XP_015837165.1:c.[8821G>A]; XP_015837196.1:c.[4848+3973G>A]; XP_015837189.1:c.[8821G>A]; XP_015837172.1:c.[8821G>A]; XP_008199748.1:c.[8644G>A]; XP_015837197.1:c.[8722G>A]; XP_015837190.1:c.[8821G>A]; XP_015837169.1:c.[8785G>A]; XP_015837186.1:c.[8644G>A]; XP_015837182.1:c.[8821G>A]; XP_015837184.1:c.[8668G>A]; XP_015837181.1:c.[8704G>A]; XP_008199742.1:c.[8617G>A]; XP_008199740.1:c.[8704G>A]; XP_015837178.1:c.[8821G>A]; XP_015837193.1:c.[8821G>A]; XP_015837198.1:c.[4848+3973G>A]","XP_015837170.1:p.[Val2941Ile]; XP_015837183.1:p.[Val2941Ile]; XP_008199741.1:p.[Val2882Ile]; XP_015837174.1:p.[Val2941Ile]; XP_015837192.1:p.[Val2941Ile]; XP_015837195.1:p.[Val1564Ile]; XP_015837188.1:p.[Val2941Ile]; XP_015837187.1:p.[Val2881Ile]; XP_015837177.1:p.[Val2907Ile]; XP_015837173.1:p.[Val2916Ile]; XP_015837180.1:p.[Val2903Ile]; XP_015837171.1:p.[Val2923Ile]; XP_015837191.1:p.[Val2873Ile]; XP_015837167.1:p.[Val2935Ile]; XP_015837185.1:p.[Val2941Ile]; XP_015837166.1:p.[Val2941Ile]; XP_015837168.1:p.[Val2933Ile]; XP_015837176.1:p.[Val2910Ile]; XP_008199749.1:p.[Val2873Ile]; XP_015837175.1:p.[Val2915Ile]; XP_015837194.1:p.[Val2941Ile]; XP_015837179.1:p.[Val2941Ile]; XP_015837165.1:p.[Val2941Ile]; XP_015837189.1:p.[Val2941Ile]; XP_015837172.1:p.[Val2941Ile]; XP_008199748.1:p.[Val2882Ile]; XP_015837197.1:p.[Val2908Ile]; XP_015837190.1:p.[Val2941Ile]; XP_015837169.1:p.[Val2929Ile]; XP_015837186.1:p.[Val2882Ile]; XP_015837182.1:p.[Val2941Ile]; XP_015837184.1:p.[Val2890Ile]; XP_015837181.1:p.[Val2902Ile]; XP_008199742.1:p.[Val2873Ile]; XP_008199740.1:p.[Val2902Ile]; XP_015837178.1:p.[Val2941Ile]; XP_015837193.1:p.[Val2941Ile]","LOC662585",662585,null,"662585 [Gene Symbol: LOC662585] [Locus Tag: TcasGA2_TC009076] [Chromosome: LG7] [Map Location: ] [Description: microtubule-actin cross-linking factor 1] [Gene Type: protein-coding]","TcasGA2_TC009076; LOC662585"]
[1054,"NC_007422.5",7297310,"SNV","T","C","Homozygous",22,22,100,1,16,9,0.36,38.91,25,25,11,18,null,1,1,"no","C/C","No",1,86.14,"XP_008199740.1:c.[6827A>G]; XP_015837189.1:c.[6944A>G]; XP_015837183.1:c.[6944A>G]; XP_015837179.1:c.[6944A>G]; XP_015837185.1:c.[6944A>G]; XP_015837193.1:c.[6944A>G]; XP_008199742.1:c.[6740A>G]; XP_015837184.1:c.[6791A>G]; XP_015837192.1:c.[6944A>G]; XP_015837176.1:c.[6851A>G]; XP_015837178.1:c.[6944A>G]; XP_008199748.1:c.[6767A>G]; XP_008199741.1:c.[6767A>G]; XP_015837173.1:c.[6869A>G]; XP_015837195.1:c.[2813A>G]; XP_015837168.1:c.[6920A>G]; XP_015837190.1:c.[6944A>G]; XP_015837196.1:c.[4848+2096A>G]; XP_015837166.1:c.[6944A>G]; XP_015837182.1:c.[6944A>G]; XP_015837197.1:c.[6845A>G]; XP_015837172.1:c.[6944A>G]; XP_015837188.1:c.[6944A>G]; XP_015837174.1:c.[6944A>G]; XP_015837181.1:c.[6827A>G]; XP_015837198.1:c.[4848+2096A>G]; XP_015837177.1:c.[6842A>G]; XP_015837187.1:c.[6764A>G]; XP_015837194.1:c.[6944A>G]; XP_015837175.1:c.[6866A>G]; XP_015837169.1:c.[6908A>G]; XP_015837165.1:c.[6944A>G]; XP_008199749.1:c.[6740A>G]; XP_015837180.1:c.[6830A>G]; XP_015837170.1:c.[6944A>G]; XP_015837171.1:c.[6890A>G]; XP_015837191.1:c.[6740A>G]; XP_015837167.1:c.[6926A>G]; XP_015837186.1:c.[6767A>G]","XP_008199740.1:p.[Lys2276Arg]; XP_015837189.1:p.[Lys2315Arg]; XP_015837183.1:p.[Lys2315Arg]; XP_015837179.1:p.[Lys2315Arg]; XP_015837185.1:p.[Lys2315Arg]; XP_015837193.1:p.[Lys2315Arg]; XP_008199742.1:p.[Lys2247Arg]; XP_015837184.1:p.[Lys2264Arg]; XP_015837192.1:p.[Lys2315Arg]; XP_015837176.1:p.[Lys2284Arg]; XP_015837178.1:p.[Lys2315Arg]; XP_008199748.1:p.[Lys2256Arg]; XP_008199741.1:p.[Lys2256Arg]; XP_015837173.1:p.[Lys2290Arg]; XP_015837195.1:p.[Lys938Arg]; XP_015837168.1:p.[Lys2307Arg]; XP_015837190.1:p.[Lys2315Arg]; XP_015837166.1:p.[Lys2315Arg]; XP_015837182.1:p.[Lys2315Arg]; XP_015837197.1:p.[Lys2282Arg]; XP_015837172.1:p.[Lys2315Arg]; XP_015837188.1:p.[Lys2315Arg]; XP_015837174.1:p.[Lys2315Arg]; XP_015837181.1:p.[Lys2276Arg]; XP_015837177.1:p.[Lys2281Arg]; XP_015837187.1:p.[Lys2255Arg]; XP_015837194.1:p.[Lys2315Arg]; XP_015837175.1:p.[Lys2289Arg]; XP_015837169.1:p.[Lys2303Arg]; XP_015837165.1:p.[Lys2315Arg]; XP_008199749.1:p.[Lys2247Arg]; XP_015837180.1:p.[Lys2277Arg]; XP_015837170.1:p.[Lys2315Arg]; XP_015837171.1:p.[Lys2297Arg]; XP_015837191.1:p.[Lys2247Arg]; XP_015837167.1:p.[Lys2309Arg]; XP_015837186.1:p.[Lys2256Arg]","LOC662585",662585,null,"662585 [Gene Symbol: LOC662585] [Locus Tag: TcasGA2_TC009076] [Chromosome: LG7] [Map Location: ] [Description: microtubule-actin cross-linking factor 1] [Gene Type: protein-coding]","TcasGA2_TC009076; LOC662585"]
[1055,"NC_007422.5",8096154,"SNV","C","T","Homozygous",20,20,100,1,15,5,0.25,38,20,20,8,16,null,1,1,"no","T/T","No",1,81.69,"XP_008195575.1:c.[50C>T]; XP_008195574.1:c.[50C>T]","XP_008195575.1:p.[Ser17Leu]; XP_008195574.1:p.[Ser17Leu]","LOC656529",656529,null,"656529 [Gene Symbol: LOC656529] [Locus Tag: TcasGA2_TC009782] [Chromosome: LG7] [Map Location: ] [Description: transcriptional repressor p66-alpha] [Gene Type: protein-coding]","LOC656529; TcasGA2_TC009782"]
[1056,"NC_007422.5",8124661,"SNV","A","G","Homozygous",22,22,100,1,9,18,0.33,38.86,27,27,12,14,null,1,1,"no","G/G","No",1,86.11,"XP_015837668.1:c.1456A>G","XP_015837668.1:p.Ser486Gly","LOC656776",656776,null,"656776 [Gene Symbol: LOC656776] [Locus Tag: TcasGA2_TC009785] [Chromosome: LG7] [Map Location: ] [Description: putative fatty acyl-CoA reductase CG5065] [Gene Type: protein-coding]","TcasGA2_TC009785; LOC656776"]
[1057,"NC_007422.5",8125677,"SNV","A","G","Homozygous",22,22,100,1,16,7,0.3,38.73,23,23,10,17,null,1,1,"no","G/G","No",1,86.11,"XP_968460.1:c.271A>G","XP_968460.1:p.Asn91Asp","LOC656867",656867,null,"656867 [Gene Symbol: LOC656867] [Locus Tag: TcasGA2_TC009786] [Chromosome: LG7] [Map Location: ] [Description: serine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC656867; TcasGA2_TC009786"]
[1058,"NC_007422.5",8216467,"SNV","A","G","Homozygous",25,25,100,1,14,14,0.5,38.16,28,28,13,17,null,1,1,"no","G/G","No",1,95.14,"XP_008195592.1:c.461A>G","XP_008195592.1:p.Asn154Ser","LOC103313622",103313622,null,"103313622 [Gene Symbol: LOC103313622] [Locus Tag: TcasGA2_TC009795] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC009795; LOC103313622"]
[1059,"NC_007422.5",8283581,"SNV","C","G","Homozygous",24,24,100,1,5,20,0.2,38.5,25,25,10,13,null,1,1,"no","G/G","No",1,92.13,"XP_015837295.1:c.[1755C>G]; XP_015837296.1:c.[1707C>G]; XP_015837298.1:c.[1755C>G]; XP_015837297.1:c.[1755C>G]; XP_015837299.1:c.[1755C>G]","XP_015837295.1:p.[Ile585Met]; XP_015837296.1:p.[Ile569Met]; XP_015837298.1:p.[Ile585Met]; XP_015837297.1:p.[Ile585Met]; XP_015837299.1:p.[Ile585Met]","LOC100142047",100142047,null,"100142047 [Gene Symbol: LOC100142047] [Locus Tag: TcasGA2_TC009801] [Chromosome: LG7] [Map Location: ] [Description: inaD-like protein] [Gene Type: protein-coding]","LOC100142047; TcasGA2_TC009801"]
[1060,"NC_007422.5",8330363,"SNV","C","G","Homozygous",21,21,100,1,8,15,0.35,38.05,23,23,12,15,null,1,1,"no","G/G","No",1,83.1,"XP_970065.3:c.3531C>G","XP_970065.3:p.Asn1177Lys","LOC658596",658596,null,"658596 [Gene Symbol: LOC658596] [Locus Tag: TcasGA2_TC009803] [Chromosome: LG7] [Map Location: ] [Description: nuclear pore membrane glycoprotein 210] [Gene Type: protein-coding]","LOC658596; TcasGA2_TC009803"]
[1061,"NC_007422.5",8529177,"SNV","G","A","Homozygous",21,21,100,1,17,11,0.39,36.33,28,28,13,11,null,1,1,"no","A/A","No",1,84.7,"XP_015837059.1:c.4273G>A","XP_015837059.1:p.Gly1425Ser","LOC107398214",107398214,null,"107398214 [Gene Symbol: LOC107398214] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","LOC107398214"]
[1062,"NC_007422.5",8661332,"SNV","C","G","Homozygous",23,23,100,1,15,8,0.35,38.83,23,23,9,14,null,1,1,"no","G/G","No",1,89.12,"XP_015837060.1:c.1852G>C","XP_015837060.1:p.Val618Leu","LOC661002",661002,null,"661002 [Gene Symbol: LOC661002] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: lactase-phlorizin hydrolase-like] [Gene Type: protein-coding]","LOC661002"]
[1063,"NC_007422.5",8721166,"SNV","A","T","Homozygous",21,21,100,1,9,14,0.39,36.52,23,23,9,10,null,1,1,"no","T/T","No",1,84.71,"XP_015837310.1:c.[170+42416A>T]; XP_015837311.1:c.[125+42416A>T]; XP_015837308.1:c.[252A>T]","XP_015837308.1:p.Glu84Asp","LOC661337",661337,null,"661337 [Gene Symbol: LOC661337] [Locus Tag: TcasGA2_TC009826] [Chromosome: LG7] [Map Location: ] [Description: protein prickle-like] [Gene Type: protein-coding]","LOC661337; TcasGA2_TC009826"]
[1064,"NC_007422.5",8809383,"SNV","G","A","Homozygous",21,21,100,1,18,3,0.14,36.05,21,21,11,14,null,1,1,"no","A/A","No",1,84.7,"XP_008195647.1:c.704G>A","XP_008195647.1:p.Arg235Lys","LOC661430",661430,null,"661430 [Gene Symbol: LOC661430] [Locus Tag: TcasGA2_TC009831] [Chromosome: LG7] [Map Location: ] [Description: endoplasmic reticulum metallopeptidase 1] [Gene Type: protein-coding]","TcasGA2_TC009831; LOC661430"]
[1065,"NC_007422.5",8809619,"SNV","T","C","Homozygous",23,23,100,1,6,17,0.26,35.09,23,23,11,16,null,1,1,"no","C/C","No",1,89.12,"XP_008195647.1:c.940T>C","XP_008195647.1:p.Tyr314His","LOC661430",661430,null,"661430 [Gene Symbol: LOC661430] [Locus Tag: TcasGA2_TC009831] [Chromosome: LG7] [Map Location: ] [Description: endoplasmic reticulum metallopeptidase 1] [Gene Type: protein-coding]","TcasGA2_TC009831; LOC661430"]
[1066,"NC_007422.5",8915464,"SNV","A","G","Homozygous",20,20,100,1,9,14,0.39,38.15,23,23,11,11,null,1,1,"no","G/G","No",1,80.09,"XP_008195651.1:c.[628T>C]; XP_973340.3:c.[628T>C]","XP_008195651.1:p.[Ser210Pro]; XP_973340.3:p.[Ser210Pro]","LOC662130",662130,null,"662130 [Gene Symbol: LOC662130] [Locus Tag: TcasGA2_TC009001] [Chromosome: LG7] [Map Location: ] [Description: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase] [Gene Type: protein-coding]","TcasGA2_TC009001; LOC662130"]
[1067,"NC_007422.5",8968748,"SNV","C","T","Homozygous",24,24,100,1,15,12,0.44,35.88,27,27,10,15,null,1,1,"no","T/T","No",1,93.73,"XP_015837113.1:c.[91G>A]; XP_015837114.1:c.[91G>A]; XP_008195658.1:c.[91G>A]","XP_015837113.1:p.[Asp31Asn]; XP_015837114.1:p.[Asp31Asn]; XP_008195658.1:p.[Asp31Asn]","LOC662382",662382,null,"662382 [Gene Symbol: LOC662382] [Locus Tag: TcasGA2_TC008998] [Chromosome: LG7] [Map Location: ] [Description: RNA-binding protein Nova-1] [Gene Type: protein-coding]","LOC662382; TcasGA2_TC008998"]
[1068,"NC_007422.5",8973673,"SNV","T","C","Homozygous",22,22,100,1,12,13,0.48,37.73,25,25,15,16,null,1,1,"no","C/C","No",1,86.13,"XP_008195657.1:c.[13T>C]; XP_008195656.1:c.[13T>C]","XP_008195657.1:p.[Trp5Arg]; XP_008195656.1:p.[Trp5Arg]","LOC662417",662417,null,"662417 [Gene Symbol: LOC662417] [Locus Tag: TcasGA2_TC009844] [Chromosome: LG7] [Map Location: ] [Description: cystatin] [Gene Type: protein-coding]","TcasGA2_TC009844; LOC662417"]
[1069,"NC_007422.5",8974130,"SNV","C","T","Homozygous",20,20,100,1,13,12,0.48,37.85,25,25,12,14,null,1,1,"no","T/T","No",1,78.69,"XP_008195656.1:c.[377C>T]; XP_008195657.1:c.[377C>T]","XP_008195656.1:p.[Pro126Leu]; XP_008195657.1:p.[Pro126Leu]","LOC662417",662417,null,"662417 [Gene Symbol: LOC662417] [Locus Tag: TcasGA2_TC009844] [Chromosome: LG7] [Map Location: ] [Description: cystatin] [Gene Type: protein-coding]","TcasGA2_TC009844; LOC662417"]
[1070,"NC_007422.5",8988879,"SNV","G","A","Homozygous",22,22,100,1,18,7,0.28,38.41,25,25,11,17,null,1,1,"no","A/A","No",1,87.71,"XP_008195661.1:c.2050G>A","XP_008195661.1:p.Val684Ile","LOC662556",662556,null,"662556 [Gene Symbol: LOC662556] [Locus Tag: TcasGA2_TC009846] [Chromosome: LG7] [Map Location: ] [Description: 5'-3' exoribonuclease 2 homolog] [Gene Type: protein-coding]","LOC662556; TcasGA2_TC009846"]
[1071,"NC_007422.5",9066172,"SNV","C","T","Homozygous",22,22,100,1,7,15,0.32,37.77,22,22,14,11,null,1,1,"no","T/T","No",1,87.71,"XP_008195672.2:c.1225C>T","XP_008195672.2:p.Arg409Cys","LOC662742",662742,null,"662742 [Gene Symbol: LOC662742] [Locus Tag: TcasGA2_TC009849] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 260] [Gene Type: protein-coding]","TcasGA2_TC009849; LOC662742"]
[1072,"NC_007422.5",9066175,"SNV","G","A","Homozygous",21,21,100,1,7,14,0.33,37.05,21,21,13,10,null,1,1,"no","A/A","No",1,84.7,"XP_008195672.2:c.1228G>A","XP_008195672.2:p.Ala410Thr","LOC662742",662742,null,"662742 [Gene Symbol: LOC662742] [Locus Tag: TcasGA2_TC009849] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 260] [Gene Type: protein-coding]","TcasGA2_TC009849; LOC662742"]
[1073,"NC_007422.5",9066182,"SNV","A","C","Homozygous",22,22,100,1,8,15,0.35,38.41,23,23,15,13,null,1,1,"no","C/C","No",1,86.14,"XP_008195672.2:c.1235A>C","XP_008195672.2:p.Glu412Ala","LOC662742",662742,null,"662742 [Gene Symbol: LOC662742] [Locus Tag: TcasGA2_TC009849] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 260] [Gene Type: protein-coding]","TcasGA2_TC009849; LOC662742"]
[1074,"NC_007422.5",9066190,"SNV","C","T","Homozygous",27,27,100,1,9,18,0.33,37.33,27,27,17,16,null,1,1,"no","T/T","No",1,102.76,"XP_008195672.2:c.1243C>T","XP_008195672.2:p.Gln415*","LOC662742",662742,null,"662742 [Gene Symbol: LOC662742] [Locus Tag: TcasGA2_TC009849] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 260] [Gene Type: protein-coding]","TcasGA2_TC009849; LOC662742"]
[1075,"NC_007422.5",9083202,"SNV","G","C","Homozygous",30,30,100,1,12,18,0.4,37.5,30,30,10,19,null,1,1,"no","C/C","No",1,110.2,"XP_015837247.1:c.[411C>G]; XP_008195676.1:c.[411C>G]; XP_008195675.1:c.[411C>G]; XP_008195674.1:c.[411C>G]; XP_015837248.1:c.[411C>G]","XP_015837247.1:p.[Asp137Glu]; XP_008195676.1:p.[Asp137Glu]; XP_008195675.1:p.[Asp137Glu]; XP_008195674.1:p.[Asp137Glu]; XP_015837248.1:p.[Asp137Glu]","LOC662829",662829,null,"662829 [Gene Symbol: LOC662829] [Locus Tag: TcasGA2_TC008993] [Chromosome: LG7] [Map Location: ] [Description: metastasis suppressor protein 1] [Gene Type: protein-coding]","TcasGA2_TC008993; LOC662829"]
[1076,"NC_007422.5",9143172,"SNV","C","T","Homozygous",20,20,100,1,15,6,0.29,36.5,21,21,13,13,null,1,1,"no","T/T","No",1,81.7,"XP_974133.1:c.[250G>A]; XP_015837252.1:c.[54-3333G>A]","XP_974133.1:p.Val84Ile","LOC662885, LOC103313642, LOC662972","662885 , 103313642 , 662972",null,"662885 [Gene Symbol: LOC662885] [Locus Tag: TcasGA2_TC008992] [Chromosome: LG7] [Map Location: ] [Description: CCR4-NOT transcription complex subunit 10] [Gene Type: protein-coding] || 103313642 [Gene Symbol: LOC103313642] [Locus Tag: TcasGA2_TC008988] [Chromosome: LG7] [Map Location: ] [Description: homologous-pairing protein 2 homolog] [Gene Type: protein-coding] || 662972 [Gene Symbol: LOC662972] [Locus Tag: TcasGA2_TC033717] [Chromosome: LG7] [Map Location: ] [Description: transmembrane protein 14C] [Gene Type: protein-coding]","TcasGA2_TC008992; LOC662885 || TcasGA2_TC008988; LOC103313642 || LOC662972; TcasGA2_TC033717"]
[1077,"NC_007422.5",9387182,"SNV","A","C","Homozygous",23,23,100,1,8,15,0.35,38.17,23,23,12,15,null,1,1,"no","C/C","No",1,89.14,"XP_008196037.1:c.[2186A>C]; XP_008196036.1:c.[2186A>C]","XP_008196037.1:p.[Glu729Ala]; XP_008196036.1:p.[Glu729Ala]","LOC103313737",103313737,null,"103313737 [Gene Symbol: LOC103313737] [Locus Tag: TcasGA2_TC008741] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313737] [Gene Type: protein-coding]","LOC103313737; TcasGA2_TC008741"]
[1078,"NC_007422.5",9387191,"SNV","G","T","Homozygous",21,21,100,1,4,18,0.18,37.62,22,22,12,13,null,1,1,"no","T/T","No",1,84.7,"XP_008196037.1:c.[2195G>T]; XP_008196036.1:c.[2195G>T]","XP_008196037.1:p.[Gly732Val]; XP_008196036.1:p.[Gly732Val]","LOC103313737",103313737,null,"103313737 [Gene Symbol: LOC103313737] [Locus Tag: TcasGA2_TC008741] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313737] [Gene Type: protein-coding]","LOC103313737; TcasGA2_TC008741"]
[1079,"NC_007422.5","9571756..9571757","MNV","CA","AG","Homozygous",20,20,100,1,20,2,0.09,39.08,22,22,8,16,null,1,1,"no","AG/AG","No",1,200,"XP_015837063.1:c.657_658delTGinsCT","XP_015837063.1:p.Ala220Ser","LOC664594, LOC103313748","664594 , 103313748",null,"664594 [Gene Symbol: LOC664594] [Locus Tag: TcasGA2_TC008758] [Chromosome: LG7] [Map Location: ] [Description: calbindin-32] [Gene Type: protein-coding] || 103313748 [Gene Symbol: LOC103313748] [Locus Tag: TcasGA2_TC010069] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313748] [Gene Type: protein-coding]","LOC664594; TcasGA2_TC008758 || LOC103313748; TcasGA2_TC010069; OBP-C07; TcOBP7L"]
[1080,"NC_007422.5",9588777,"SNV","G","A","Homozygous",21,22,95.45,1,9,16,0.36,38.67,25,26,14,15,null,1,1,"no","A/A","No",1,55.87,"XP_975685.1:c.385G>A","XP_975685.1:p.Val129Ile","LOC664594, LOC664596","664594 , 664596",null,"664594 [Gene Symbol: LOC664594] [Locus Tag: TcasGA2_TC008758] [Chromosome: LG7] [Map Location: ] [Description: calbindin-32] [Gene Type: protein-coding] || 664596 [Gene Symbol: LOC664596] [Locus Tag: TcasGA2_TC008757] [Chromosome: LG7] [Map Location: ] [Description: odorant binding protein (subfamily minus-C) C04] [Gene Type: protein-coding]","LOC664594; TcasGA2_TC008758 || TcOBP7E; OBP-C04; TcasGA2_TC008757; LOC664596"]
[1081,"NC_007422.5",9610336,"SNV","C","T","Homozygous",21,21,100,1,6,15,0.29,35.57,21,21,10,14,null,1,1,"no","T/T","No",1,84.71,"XP_008196062.1:c.659C>T","XP_008196062.1:p.Ala220Val","LOC103313746",103313746,null,"103313746 [Gene Symbol: LOC103313746] [Locus Tag: TcasGA2_TC008761] [Chromosome: LG7] [Map Location: ] [Description: vanin-like protein 1] [Gene Type: protein-coding]","LOC103313746; TcasGA2_TC008761"]
[1082,"NC_007422.5",9685297,"SNV","G","A","Heterozygous",10,26,38.46,1,5,6,0.45,34.8,11,30,6,7,-2.08,0.29,1,"no","A/G","No",1,68.01,"XP_015837064.1:c.1001G>A","XP_015837064.1:p.Arg334Lys","LOC664584",664584,null,"664584 [Gene Symbol: LOC664584] [Locus Tag: TcasGA2_TC008769] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664584] [Gene Type: protein-coding]","TcasGA2_TC008769; LOC664584"]
[1083,"NC_007422.5",9685299,"SNV","G","A","Heterozygous",8,24,33.33,1,5,3,0.38,34.88,8,27,6,6,-1.16,0.6,0.99,"no","A/G","No",1,37.99,"XP_015837064.1:c.1003G>A","XP_015837064.1:p.Ala335Thr","LOC664584",664584,null,"664584 [Gene Symbol: LOC664584] [Locus Tag: TcasGA2_TC008769] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664584] [Gene Type: protein-coding]","TcasGA2_TC008769; LOC664584"]
[1084,"NC_007422.5",9685353,"SNV","A","G","Heterozygous",9,22,40.91,1,5,6,0.45,35.78,11,25,5,6,-0.9,0.98,0.95,"no","A/G","No",1,67.22,"XP_015837064.1:c.1057A>G","XP_015837064.1:p.Thr353Ala","LOC664584",664584,null,"664584 [Gene Symbol: LOC664584] [Locus Tag: TcasGA2_TC008769] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664584] [Gene Type: protein-coding]","TcasGA2_TC008769; LOC664584"]
[1085,"NC_007422.5",9692896,"SNV","T","A","Homozygous",20,20,100,1,17,6,0.26,37.65,23,23,11,11,null,1,1,"no","A/A","No",1,81.69,"XP_015837065.1:c.[766-1320A>T]; XP_015837590.1:c.[1291A>T]; XP_015837589.1:c.[1369A>T]","XP_015837590.1:p.[Thr431Ser]; XP_015837589.1:p.[Thr457Ser]","LOC664580, LOC664581","664580 , 664581",null,"664580 [Gene Symbol: LOC664580] [Locus Tag: TcasGA2_TC010054] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664580] [Gene Type: protein-coding] || 664581 [Gene Symbol: LOC664581] [Locus Tag: TcasGA2_TC033823] [Chromosome: LG7] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2-like] [Gene Type: protein-coding]","LOC664580; TcasGA2_TC010054 || TcasGA2_TC033823; LOC664581"]
[1086,"NC_007422.5","9732889..9732890","MNV","CT","TA","Heterozygous",8,27,29.63,1,3,7,0.3,39.12,10,29,8,8,null,0.63,1,"no","complex","No",1,200,"XP_975667.1:c.1453_1454delCTinsTA","XP_975667.1:p.Leu485Tyr","LOC664578",664578,null,"664578 [Gene Symbol: LOC664578] [Locus Tag: TcasGA2_TC008773] [Chromosome: LG7] [Map Location: ] [Description: structural maintenance of chromosomes protein 5] [Gene Type: protein-coding]","LOC664578; TcasGA2_TC008773"]
[1087,"NC_007422.5","9732889..9732890","MNV","CT","TG","Heterozygous",19,27,70.37,1,6,13,0.32,38.84,19,29,9,10,null,0.85,1,"no","complex","No",1,200,"XP_975667.1:c.1453_1454delCTinsTG","XP_975667.1:p.Leu485Cys","LOC664578",664578,null,"664578 [Gene Symbol: LOC664578] [Locus Tag: TcasGA2_TC008773] [Chromosome: LG7] [Map Location: ] [Description: structural maintenance of chromosomes protein 5] [Gene Type: protein-coding]","LOC664578; TcasGA2_TC008773"]
[1088,"NC_007422.5","9733743..9733744","MNV","AG","TA","Heterozygous",5,22,22.73,1,4,1,0.2,38.1,5,22,4,5,-1.09,0.41,0.25,"no","complex","No",1,200,"XP_975667.1:c.2160_2161delAGinsTA","XP_975667.1:p.Val721Ile","LOC664578",664578,null,"664578 [Gene Symbol: LOC664578] [Locus Tag: TcasGA2_TC008773] [Chromosome: LG7] [Map Location: ] [Description: structural maintenance of chromosomes protein 5] [Gene Type: protein-coding]","LOC664578; TcasGA2_TC008773"]
[1089,"NC_007422.5",9734215,"SNV","G","C","Heterozygous",12,24,50,1,6,8,0.43,36.58,14,27,8,7,-1.62,0.3,0.85,"no","C/G","No",1,95.85,"XP_975667.1:c.2632G>C","XP_975667.1:p.Gly878Arg","LOC664578",664578,null,"664578 [Gene Symbol: LOC664578] [Locus Tag: TcasGA2_TC008773] [Chromosome: LG7] [Map Location: ] [Description: structural maintenance of chromosomes protein 5] [Gene Type: protein-coding]","LOC664578; TcasGA2_TC008773"]
[1090,"NC_007422.5",9734702,"SNV","C","T","Heterozygous",10,22,45.45,1,1,9,0.1,36.4,10,23,7,7,-2.18,0.36,0.82,"no","C/T","No",1,78.8,"XP_975667.1:c.3119C>T","XP_975667.1:p.Ala1040Val","LOC664578",664578,null,"664578 [Gene Symbol: LOC664578] [Locus Tag: TcasGA2_TC008773] [Chromosome: LG7] [Map Location: ] [Description: structural maintenance of chromosomes protein 5] [Gene Type: protein-coding]","LOC664578; TcasGA2_TC008773"]
[1091,"NC_007422.5",9736653,"SNV","C","T","Heterozygous",8,22,36.36,1,5,3,0.38,38.38,8,22,4,6,-0.07,0.05,0.66,"no","C/T","No",1,53.46,"XP_975666.1:c.1403G>A","XP_975666.1:p.Arg468Lys","LOC664577",664577,null,"664577 [Gene Symbol: LOC664577] [Locus Tag: TcasGA2_TC010052] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","TcasGA2_TC010052; LOC664577"]
[1092,"NC_007422.5",9736671,"SNV","T","C","Homozygous",26,26,100,1,22,8,0.27,38.23,30,30,20,14,null,1,1,"no","C/C","No",1,98.17,"XP_975666.1:c.1385A>G","XP_975666.1:p.Glu462Gly","LOC664577",664577,null,"664577 [Gene Symbol: LOC664577] [Locus Tag: TcasGA2_TC010052] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","TcasGA2_TC010052; LOC664577"]
[1093,"NC_007422.5",9737661,"SNV","T","C","Heterozygous",19,29,65.52,1,15,6,0.29,37.63,21,32,13,16,-0.73,0.85,1,"no","C/T","No",1,59.34,"XP_975666.1:c.502A>G","XP_975666.1:p.Lys168Glu","LOC664577",664577,null,"664577 [Gene Symbol: LOC664577] [Locus Tag: TcasGA2_TC010052] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","TcasGA2_TC010052; LOC664577"]
[1094,"NC_007422.5",9737886,"SNV","T","G","Heterozygous",9,20,45,1,2,7,0.22,38.22,9,24,6,6,2.32,0.86,0.61,"no","G/T","No",1,72.34,"XP_975666.1:c.277A>C","XP_975666.1:p.Asn93His","LOC664577",664577,null,"664577 [Gene Symbol: LOC664577] [Locus Tag: TcasGA2_TC010052] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","TcasGA2_TC010052; LOC664577"]
[1095,"NC_007422.5","9738187..9738189","Deletion","AGC","-","Heterozygous",15,23,65.22,1,3,12,0.2,39.07,15,24,6,6,1.44,0.44,0.81,"no","complex","No",1,200,"XP_975666.1:c.21_23delGCT","XP_975666.1:p.Leu8del","LOC664577",664577,null,"664577 [Gene Symbol: LOC664577] [Locus Tag: TcasGA2_TC010052] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","TcasGA2_TC010052; LOC664577"]
[1096,"NC_007422.5",9741408,"SNV","T","A","Heterozygous",6,20,30,1,2,4,0.33,40,6,24,5,5,2.1,0.37,0.98,"no","A/T","No",1,33.37,"XP_975665.2:c.[832A>T]; XP_015837080.1:c.[835A>T]","XP_975665.2:p.[Ile278Phe]; XP_015837080.1:p.[Ile279Phe]","LOC664576",664576,null,"664576 [Gene Symbol: LOC664576] [Locus Tag: TcasGA2_TC010051] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","LOC664576; TcasGA2_TC010051"]
[1097,"NC_007422.5",9741627,"SNV","C","T","Homozygous",20,20,100,1,12,14,0.46,35.6,26,26,14,17,null,1,1,"no","T/T","No",1,81.7,"XP_015837080.1:c.[667G>A]; XP_975665.2:c.[664G>A]","XP_015837080.1:p.[Ala223Thr]; XP_975665.2:p.[Ala222Thr]","LOC664576",664576,null,"664576 [Gene Symbol: LOC664576] [Locus Tag: TcasGA2_TC010051] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","LOC664576; TcasGA2_TC010051"]
[1098,"NC_007422.5",9827227,"SNV","T","A","Heterozygous",6,23,26.09,1,0,6,0,40.67,6,25,2,3,1.61,0.2,0.57,"no","A/T","No",1,25.03,"XP_975653.1:c.626T>A","XP_975653.1:p.Phe209Tyr","LOC664564",664564,null,"664564 [Gene Symbol: LOC664564] [Locus Tag: TcasGA2_TC035050] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase-like] [Gene Type: protein-coding]","LOC664564; TcasGA2_TC035050"]
[1099,"NC_007422.5",9836230,"SNV","A","G","Heterozygous",13,22,59.09,1,10,9,0.47,37.54,19,29,5,8,-0.87,0.25,0.91,"no","A/G","No",1,66.25,"XP_975649.1:c.31A>G","XP_975649.1:p.Met11Val","LOC664560",664560,null,"664560 [Gene Symbol: LOC664560] [Locus Tag: TcasGA2_TC008781] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase] [Gene Type: protein-coding]","LOC664560; TcasGA2_TC008781"]
[1100,"NC_007422.5",9862662,"SNV","G","C","Homozygous",20,20,100,1,16,11,0.41,36.8,27,27,10,14,null,1,1,"no","C/C","No",1,80.11,"XP_975633.1:c.374C>G","XP_975633.1:p.Ala125Gly","LOC664544",664544,null,"664544 [Gene Symbol: LOC664544] [Locus Tag: TcasGA2_TC010046] [Chromosome: LG7] [Map Location: ] [Description: protein PRRC1-A] [Gene Type: protein-coding]","LOC664544; TcasGA2_TC010046"]
[1101,"NC_007422.5","9871651..9871652","MNV","CA","GC","Heterozygous",8,21,38.1,1,0,8,0,39.19,8,24,2,3,1.26,0.06,0.38,"no","complex","No",1,200,"XP_008195999.1:c.[427_428delCAinsGC]; XP_015837199.1:c.[427_428delCAinsGC]","XP_008195999.1:p.[Gln143Ala]; XP_015837199.1:p.[Gln143Ala]","LOC664538",664538,null,"664538 [Gene Symbol: LOC664538] [Locus Tag: TcasGA2_TC008787] [Chromosome: LG7] [Map Location: ] [Description: anoctamin-8] [Gene Type: protein-coding]","LOC664538; TcasGA2_TC008787"]
[1102,"NC_007422.5",9878324,"SNV","G","A","Heterozygous",9,22,40.91,1,0,9,0,38.89,9,23,5,7,0.2,0.25,0.19,"no","A/G","No",1,66.27,"XP_008196000.1:c.1246C>T","XP_008196000.1:p.Pro416Ser","LOC664536",664536,null,"664536 [Gene Symbol: LOC664536] [Locus Tag: TcasGA2_TC010044] [Chromosome: LG7] [Map Location: ] [Description: alanine--tRNA ligase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC010044; LOC664536"]
[1103,"NC_007422.5","9894849..9894850","MNV","TA","AG","Homozygous",20,20,100,1,9,13,0.41,39.49,22,22,11,14,null,1,1,"no","AG/AG","No",1,200,"XP_015837070.1:c.82_83delTAinsCT","XP_015837070.1:p.Tyr28Leu","LOC107398216",107398216,null,"107398216 [Gene Symbol: LOC107398216] [Locus Tag: TcasGA2_TC030200] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398216] [Gene Type: protein-coding]","TcasGA2_TC030200; LOC107398216; TcGr108; TcGr109"]
[1104,"NC_007422.5",9910609,"SNV","C","G","Homozygous",20,20,100,1,12,9,0.43,37.3,21,21,10,12,null,1,1,"no","G/G","No",1,80.09,"XP_008195995.1:c.45C>G","XP_008195995.1:p.Ile15Met","LOC103313726",103313726,null,"103313726 [Gene Symbol: LOC103313726] [Locus Tag: TcasGA2_TC033815] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313726] [Gene Type: protein-coding]","LOC103313726; TcasGA2_TC033815"]
[1105,"NC_007422.5","9912836..9912837","MNV","CA","AT","Homozygous",21,21,100,1,13,12,0.48,36.66,25,25,17,18,null,1,1,"no","AT/AT","No",1,200,"XP_015837543.1:c.[1118_1119delTGinsAT]; XP_015837544.1:c.[863_864delTGinsAT]","XP_015837543.1:p.[Met373Asn]; XP_015837544.1:p.[Met288Asn]","LOC664529",664529,null,"664529 [Gene Symbol: LOC664529] [Locus Tag: TcasGA2_TC010040] [Chromosome: LG7] [Map Location: ] [Description: patj homolog] [Gene Type: protein-coding]","TcasGA2_TC010040; LOC664529"]
[1106,"NC_007422.5","9912853^9912854","Insertion","-","T","Homozygous",20,20,100,1,10,15,0.4,37.15,25,25,11,15,null,1,1,"no","T/T","No",1,78.69,"XP_015837544.1:c.[846_847insA]; XP_015837543.1:c.[1101_1102insA]","XP_015837544.1:p.[Pro283fs]; XP_015837543.1:p.[Pro368fs]","LOC664529",664529,null,"664529 [Gene Symbol: LOC664529] [Locus Tag: TcasGA2_TC010040] [Chromosome: LG7] [Map Location: ] [Description: patj homolog] [Gene Type: protein-coding]","TcasGA2_TC010040; LOC664529"]
[1107,"NC_007422.5",9913170,"SNV","C","G","Heterozygous",16,20,80,0.86,7,9,0.44,36.62,16,21,10,13,1.56,0.98,1,"no","C/G","No",1,8.39,"XP_015837543.1:c.[835G>C]; XP_015837544.1:c.[580G>C]","XP_015837543.1:p.[Val279Leu]; XP_015837544.1:p.[Val194Leu]","LOC664529",664529,null,"664529 [Gene Symbol: LOC664529] [Locus Tag: TcasGA2_TC010040] [Chromosome: LG7] [Map Location: ] [Description: patj homolog] [Gene Type: protein-coding]","TcasGA2_TC010040; LOC664529"]
[1108,"NC_007422.5",10023074,"SNV","G","A","Homozygous",20,20,100,1,17,5,0.23,37.85,22,22,11,13,null,1,1,"no","A/A","No",1,81.69,"XP_975585.1:c.880G>A","XP_975585.1:p.Val294Ile","LOC664490",664490,null,"664490 [Gene Symbol: LOC664490] [Locus Tag: TcasGA2_TC008800] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664490] [Gene Type: protein-coding]","TcasGA2_TC008800; LOC664490"]
[1109,"NC_007422.5",10061395,"SNV","C","T","Homozygous",23,23,100,1,22,4,0.15,39,26,26,11,19,null,1,1,"no","T/T","No",1,90.72,"XP_008195982.2:c.374G>A","XP_008195982.2:p.Arg125His","LOC103313724",103313724,null,"103313724 [Gene Symbol: LOC103313724] [Locus Tag: TcasGA2_TC010028] [Chromosome: LG7] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 2] [Gene Type: protein-coding]","LOC103313724; TcasGA2_TC010028"]
[1110,"NC_007422.5",10061653,"SNV","T","A","Homozygous",23,23,100,1,10,20,0.33,37.78,30,30,13,13,null,1,1,"no","A/A","No",1,90.71,"XP_008195982.2:c.163A>T","XP_008195982.2:p.Ile55Phe","LOC103313724",103313724,null,"103313724 [Gene Symbol: LOC103313724] [Locus Tag: TcasGA2_TC010028] [Chromosome: LG7] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 2] [Gene Type: protein-coding]","LOC103313724; TcasGA2_TC010028"]
[1111,"NC_007422.5",10085578,"SNV","T","G","Homozygous",20,20,100,1,13,11,0.46,37.4,24,24,8,12,null,1,1,"no","G/G","No",1,80.09,"XP_008195972.1:c.369A>C","XP_008195972.1:p.Gln123His","LOC664472",664472,null,"664472 [Gene Symbol: LOC664472] [Locus Tag: TcasGA2_TC010024] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: endocytosis protein end4] [Gene Type: protein-coding]","TcasGA2_TC010024; LOC664472"]
[1112,"NC_007422.5",10093010,"SNV","C","T","Heterozygous",13,21,61.9,1,4,9,0.31,37.85,13,22,6,8,-2.1,0.72,0.95,"no","C/T","No",1,57.42,"XP_008195969.1:c.[1099-151G>A]; XP_015837642.1:c.[1220G>A]; XP_015837641.1:c.[1174-151G>A]; XP_975566.1:c.[1174-151G>A]","XP_015837642.1:p.Ser407Asn","LOC664468",664468,null,"664468 [Gene Symbol: LOC664468] [Locus Tag: TcasGA2_TC010021] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664468] [Gene Type: protein-coding]","LOC664468; TcasGA2_TC010021"]
[1113,"NC_007422.5",10105082,"SNV","T","A","Homozygous",40,40,100,1,26,21,0.45,38.12,47,47,15,21,null,1,1,"no","A/A","No",1,141.84,"XP_008195969.1:c.[510A>T]; XP_015837641.1:c.[585A>T]; XP_015837642.1:c.[585A>T]; XP_975566.1:c.[585A>T]","XP_008195969.1:p.[Gln170His]; XP_015837641.1:p.[Gln195His]; XP_015837642.1:p.[Gln195His]; XP_975566.1:p.[Gln195His]","LOC664468",664468,null,"664468 [Gene Symbol: LOC664468] [Locus Tag: TcasGA2_TC010021] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664468] [Gene Type: protein-coding]","LOC664468; TcasGA2_TC010021"]
[1114,"NC_007422.5",10105089,"SNV","A","G","Homozygous",39,39,100,1,24,21,0.47,37.9,45,45,15,20,null,1,1,"no","G/G","No",1,137.24,"XP_015837642.1:c.[578T>C]; XP_008195969.1:c.[503T>C]; XP_015837641.1:c.[578T>C]; XP_975566.1:c.[578T>C]","XP_015837642.1:p.[Leu193Pro]; XP_008195969.1:p.[Leu168Pro]; XP_015837641.1:p.[Leu193Pro]; XP_975566.1:p.[Leu193Pro]","LOC664468",664468,null,"664468 [Gene Symbol: LOC664468] [Locus Tag: TcasGA2_TC010021] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664468] [Gene Type: protein-coding]","LOC664468; TcasGA2_TC010021"]
[1115,"NC_007422.5",10391401,"SNV","G","C","Heterozygous",5,21,23.81,0.98,3,2,0.4,38.4,5,23,4,5,-0.45,0.81,0.56,"no","C/G","No",1,17.82,"XP_975551.3:c.85G>C","XP_975551.3:p.Val29Leu","LOC664452",664452,null,"664452 [Gene Symbol: LOC664452] [Locus Tag: TcasGA2_TC008819] [Chromosome: LG7] [Map Location: ] [Description: nuclear pore complex protein Nup133] [Gene Type: protein-coding]","LOC664452; TcasGA2_TC008819"]
[1116,"NC_007422.5",10391404,"SNV","A","G","Heterozygous",5,22,22.73,0.98,3,2,0.4,38,5,24,4,5,-0.82,0.15,0.64,"no","A/G","No",1,16.32,"XP_975551.3:c.88A>G","XP_975551.3:p.Arg30Gly","LOC664452",664452,null,"664452 [Gene Symbol: LOC664452] [Locus Tag: TcasGA2_TC008819] [Chromosome: LG7] [Map Location: ] [Description: nuclear pore complex protein Nup133] [Gene Type: protein-coding]","LOC664452; TcasGA2_TC008819"]
[1117,"NC_007422.5",10391473,"SNV","C","A","Homozygous",18,20,90,0.99,16,4,0.2,38.5,20,22,10,11,null,0.91,0.95,"no","A/A","No",1,18.64,"XP_975551.3:c.157C>A","XP_975551.3:p.Leu53Ile","LOC664452",664452,null,"664452 [Gene Symbol: LOC664452] [Locus Tag: TcasGA2_TC008819] [Chromosome: LG7] [Map Location: ] [Description: nuclear pore complex protein Nup133] [Gene Type: protein-coding]","LOC664452; TcasGA2_TC008819"]
[1118,"NC_007422.5",10391477,"SNV","A","G","Homozygous",21,21,100,1,17,7,0.29,38.76,24,24,11,14,null,1,1,"no","G/G","No",1,83.1,"XP_975551.3:c.161A>G","XP_975551.3:p.Asn54Ser","LOC664452",664452,null,"664452 [Gene Symbol: LOC664452] [Locus Tag: TcasGA2_TC008819] [Chromosome: LG7] [Map Location: ] [Description: nuclear pore complex protein Nup133] [Gene Type: protein-coding]","LOC664452; TcasGA2_TC008819"]
[1119,"NC_007422.5",10391836,"SNV","T","G","Heterozygous",6,21,28.57,1,6,2,0.25,34.17,8,23,2,3,-1.52,0.22,0.78,"no","G/T","No",1,31.23,"XP_975551.3:c.427T>G","XP_975551.3:p.Leu143Val","LOC664452",664452,null,"664452 [Gene Symbol: LOC664452] [Locus Tag: TcasGA2_TC008819] [Chromosome: LG7] [Map Location: ] [Description: nuclear pore complex protein Nup133] [Gene Type: protein-coding]","LOC664452; TcasGA2_TC008819"]
[1120,"NC_007422.5",10394848,"SNV","A","C","Heterozygous",16,21,76.19,0.98,11,10,0.48,38.62,21,26,8,11,null,0.87,1,"no","C/T","No",1,18.03,"XP_975551.3:c.1972A>C","XP_975551.3:p.Ile658Leu","LOC664452",664452,null,"664452 [Gene Symbol: LOC664452] [Locus Tag: TcasGA2_TC008819] [Chromosome: LG7] [Map Location: ] [Description: nuclear pore complex protein Nup133] [Gene Type: protein-coding]","LOC664452; TcasGA2_TC008819"]
[1121,"NC_007422.5",10394848,"SNV","A","T","Heterozygous",5,21,23.81,0.98,3,2,0.4,39.2,5,26,3,5,null,0.32,0.99,"no","C/T","No",1,18.03,"XP_975551.3:c.1972A>T","XP_975551.3:p.Ile658Leu","LOC664452",664452,null,"664452 [Gene Symbol: LOC664452] [Locus Tag: TcasGA2_TC008819] [Chromosome: LG7] [Map Location: ] [Description: nuclear pore complex protein Nup133] [Gene Type: protein-coding]","LOC664452; TcasGA2_TC008819"]
[1122,"NC_007422.5",10421561,"SNV","A","G","Homozygous",20,20,100,1,7,16,0.3,36.4,23,23,12,14,null,1,1,"no","G/G","No",1,80.09,"XP_008196051.1:c.7973T>C","XP_008196051.1:p.Val2658Ala","LOC664436",664436,null,"664436 [Gene Symbol: LOC664436] [Locus Tag: TcasGA2_TC010007] [Chromosome: LG7] [Map Location: ] [Description: centromere-associated protein E] [Gene Type: protein-coding]","LOC664436; TcasGA2_TC010007"]
[1123,"NC_007422.5",10502182,"SNV","T","A","Homozygous",21,21,100,1,14,8,0.36,36.29,22,22,10,17,null,1,1,"no","A/A","No",1,84.7,"XP_008195959.1:c.[1293A>T]; XP_008195958.1:c.[1293A>T]; XP_008195960.1:c.[1293A>T]; XP_015837351.1:c.[1204+167A>T]","XP_008195959.1:p.[Glu431Asp]; XP_008195958.1:p.[Glu431Asp]; XP_008195960.1:p.[Glu431Asp]","LOC664426",664426,null,"664426 [Gene Symbol: LOC664426] [Locus Tag: TcasGA2_TC010001] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC010001; LOC664426"]
[1124,"NC_007422.5",10524084,"SNV","T","G","Homozygous",22,22,100,1,15,9,0.38,38.77,24,24,16,15,null,1,1,"no","G/G","No",1,86.11,"XP_975520.3:c.541A>C","XP_975520.3:p.Lys181Gln","LOC664420",664420,null,"664420 [Gene Symbol: LOC664420] [Locus Tag: TcasGA2_TC030216] [Chromosome: LG7] [Map Location: ] [Description: gustatory receptor candidate 11] [Gene Type: protein-coding]","LOC664420; TcGr125; TcasGA2_TC030216; gr11; gr55"]
[1125,"NC_007422.5",10546914,"SNV","C","T","Homozygous",20,20,100,1,4,16,0.2,35.35,20,20,11,12,null,1,1,"no","T/T","No",1,81.7,"XP_008195939.1:c.[269G>A]; XP_975509.1:c.[269G>A]","XP_008195939.1:p.[Ser90Asn]; XP_975509.1:p.[Ser90Asn]","LOC664409",664409,null,"664409 [Gene Symbol: LOC664409] [Locus Tag: TcasGA2_TC009997] [Chromosome: LG7] [Map Location: ] [Description: delta-aminolevulinic acid dehydratase] [Gene Type: protein-coding]","LOC664409; TcasGA2_TC009997"]
[1126,"NC_007422.5",10606828,"SNV","C","T","Homozygous",20,20,100,1,7,13,0.35,36.65,20,20,11,11,null,1,1,"no","T/T","No",1,81.7,"XP_975486.1:c.[3381+2492C>T]; XP_008195928.1:c.[3399+2492C>T]; XP_015837368.1:c.[796G>A]","XP_015837368.1:p.Val266Ile","LOC664386, LOC107398284","664386 , 107398284",null,"664386 [Gene Symbol: LOC664386] [Locus Tag: TcasGA2_TC008835] [Chromosome: LG7] [Map Location: ] [Description: probable Rho GTPase-activating protein CG5521] [Gene Type: protein-coding] || 107398284 [Gene Symbol: LOC107398284] [Locus Tag: TcasGA2_TC009993] [Chromosome: LG7] [Map Location: ] [Description: katanin p60 ATPase-containing subunit A-like 2] [Gene Type: protein-coding]","LOC664386; TcasGA2_TC008835 || TcasGA2_TC009993; LOC107398284"]
[1127,"NC_007422.5",10661224,"SNV","C","G","Homozygous",22,22,100,1,16,7,0.3,39.14,23,23,17,18,null,1,1,"no","G/G","No",1,86.11,"XP_015837354.1:c.[1972C>G]; XP_008195910.1:c.[1927C>G]","XP_015837354.1:p.[Gln658Glu]; XP_008195910.1:p.[Gln643Glu]","LOC664373",664373,null,"664373 [Gene Symbol: LOC664373] [Locus Tag: TcasGA2_TC008839] [Chromosome: LG7] [Map Location: ] [Description: integrin alpha-PS4] [Gene Type: protein-coding]","LOC664373; TcasGA2_TC008839"]
[1128,"NC_007422.5",10661229,"SNV","A","T","Homozygous",25,25,100,1,18,8,0.31,38.56,26,26,19,20,null,1,1,"no","T/T","No",1,96.73,"XP_015837354.1:c.[1977A>T]; XP_008195910.1:c.[1932A>T]","XP_015837354.1:p.[Leu659Phe]; XP_008195910.1:p.[Leu644Phe]","LOC664373",664373,null,"664373 [Gene Symbol: LOC664373] [Locus Tag: TcasGA2_TC008839] [Chromosome: LG7] [Map Location: ] [Description: integrin alpha-PS4] [Gene Type: protein-coding]","LOC664373; TcasGA2_TC008839"]
[1129,"NC_007422.5",10743135,"SNV","A","G","Heterozygous",15,20,75,0.99,9,9,0.5,37.4,18,25,10,9,0,0.95,1,"no","A/G","No",1,20.98,"XP_008195897.1:c.[1657A>G]; XP_008195898.1:c.[1657A>G]","XP_008195897.1:p.[Lys553Glu]; XP_008195898.1:p.[Lys553Glu]","LOC664307",664307,null,"664307 [Gene Symbol: LOC664307] [Locus Tag: TcasGA2_TC031208] [Chromosome: LG7] [Map Location: ] [Description: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase] [Gene Type: protein-coding]","TcasGA2_TC031208; LOC664307"]
[1130,"NC_007422.5",11283081,"SNV","A","G","Homozygous",20,20,100,1,8,12,0.4,38.8,20,20,8,12,null,1,1,"no","G/G","No",1,80.09,"XP_975104.2:c.368T>C","XP_975104.2:p.Ile123Thr","LOC663986",663986,null,"663986 [Gene Symbol: LOC663986] [Locus Tag: TcasGA2_TC009964] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663986] [Gene Type: protein-coding]","LOC663986; TcasGA2_TC009964"]
[1131,"NC_007422.5",11314613,"SNV","C","T","Homozygous",21,21,100,1,13,9,0.41,39.38,22,22,11,14,null,1,1,"no","T/T","No",1,84.7,"XP_015837335.1:c.[1996G>A]; XP_015837337.1:c.[1795G>A]; XP_015837334.1:c.[2038G>A]; XP_015837336.1:c.[2038G>A]; XP_015837338.1:c.[1726G>A]","XP_015837335.1:p.[Gly666Ser]; XP_015837337.1:p.[Gly599Ser]; XP_015837334.1:p.[Gly680Ser]; XP_015837336.1:p.[Gly680Ser]; XP_015837338.1:p.[Gly576Ser]","LOC663866",663866,null,"663866 [Gene Symbol: LOC663866] [Locus Tag: TcasGA2_TC009960] [Chromosome: LG7] [Map Location: ] [Description: ADAMTS-like protein 1] [Gene Type: protein-coding]","TcasGA2_TC009960; LOC663866"]
[1132,"NC_007422.5",11347439,"SNV","G","A","Homozygous",21,21,100,1,12,12,0.5,35.76,24,24,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_975881.1:c.[133G>A]; XP_015837334.1:c.[321+7020C>T]; XP_015837335.1:c.[321+7020C>T]; XP_015837336.1:c.[321+7020C>T]","XP_975881.1:p.Ala45Thr","LOC663866, LOC662285","663866 , 662285",null,"663866 [Gene Symbol: LOC663866] [Locus Tag: TcasGA2_TC009960] [Chromosome: LG7] [Map Location: ] [Description: ADAMTS-like protein 1] [Gene Type: protein-coding] || 662285 [Gene Symbol: LOC662285] [Locus Tag: TcasGA2_TC008889] [Chromosome: LG7] [Map Location: ] [Description: larval/pupal cuticle protein H1C] [Gene Type: protein-coding]","TcasGA2_TC009960; LOC663866 || LOC662285; TcasGA2_TC008889"]
[1133,"NC_007422.5",11589284,"SNV","T","C","Homozygous",21,21,100,1,11,13,0.46,37.38,24,24,9,12,null,1,1,"no","C/C","No",1,83.12,"XP_015837100.1:c.[2255T>C]; XP_008195836.1:c.[2255T>C]; XP_015837102.1:c.[2246T>C]; XP_015837099.1:c.[2255T>C]; XP_008195835.1:c.[2255T>C]; XP_015837101.1:c.[2252T>C]","XP_015837100.1:p.[Phe752Ser]; XP_008195836.1:p.[Phe752Ser]; XP_015837102.1:p.[Phe749Ser]; XP_015837099.1:p.[Phe752Ser]; XP_008195835.1:p.[Phe752Ser]; XP_015837101.1:p.[Phe751Ser]","LOC663550",663550,null,"663550 [Gene Symbol: LOC663550] [Locus Tag: TcasGA2_TC008907] [Chromosome: LG7] [Map Location: ] [Description: WD repeat, SAM and U-box domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC008907; LOC663550"]
[1134,"NC_007422.5",11670887,"SNV","C","A","Homozygous",20,20,100,1,13,9,0.41,37.05,22,22,12,16,null,1,1,"no","A/A","No",1,81.69,"XP_008195826.1:c.526C>A","XP_008195826.1:p.Pro176Thr","LOC103313687, LOC663405","103313687 , 663405",null,"103313687 [Gene Symbol: LOC103313687] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313687] [Gene Type: ncRNA] || 663405 [Gene Symbol: LOC663405] [Locus Tag: TcasGA2_TC008910] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313687 || TcasGA2_TC008910; LOC663405"]
[1135,"NC_007422.5",11670990,"SNV","G","T","Homozygous",25,25,100,1,12,13,0.48,38.8,25,25,12,12,null,1,1,"no","T/T","No",1,96.73,"XP_008195826.1:c.629G>T","XP_008195826.1:p.Ser210Ile","LOC103313687, LOC663405","103313687 , 663405",null,"103313687 [Gene Symbol: LOC103313687] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313687] [Gene Type: ncRNA] || 663405 [Gene Symbol: LOC663405] [Locus Tag: TcasGA2_TC008910] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313687 || TcasGA2_TC008910; LOC663405"]
[1136,"NC_007422.5",11778830,"SNV","T","C","Homozygous",28,28,100,1,7,23,0.23,38.43,30,30,15,16,null,1,1,"no","C/C","No",1,104.18,"XP_974255.1:c.238A>G","XP_974255.1:p.Asn80Asp","LOC663101",663101,null,"663101 [Gene Symbol: LOC663101] [Locus Tag: TcasGA2_TC031204] [Chromosome: LG7] [Map Location: ] [Description: ethanolaminephosphotransferase 1-like] [Gene Type: protein-coding]","LOC663101; TcasGA2_TC031204"]
[1137,"NC_007422.5",11885394,"SNV","C","G","Homozygous",21,21,100,1,10,14,0.42,38.52,24,24,10,17,null,1,1,"no","G/G","No",1,83.1,"XP_008195802.1:c.[3575G>C]; XP_015837463.1:c.[2861G>C]","XP_008195802.1:p.[Ser1192Thr]; XP_015837463.1:p.[Ser954Thr]","LOC100142360",100142360,null,"100142360 [Gene Symbol: LOC100142360] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC100142360] [Gene Type: protein-coding]","LOC100142360"]
[1138,"NC_007422.5",11950759,"SNV","A","G","Homozygous",23,23,100,1,9,16,0.36,37.65,25,25,12,14,null,1,1,"no","G/G","No",1,89.12,"XP_008195789.1:c.4927A>G","XP_008195789.1:p.Thr1643Ala","LOC662516",662516,null,"662516 [Gene Symbol: LOC662516] [Locus Tag: TcasGA2_TC008923] [Chromosome: LG7] [Map Location: ] [Description: myosin 22] [Gene Type: protein-coding]","TcasGA2_TC008923; LOC662516; Myo22"]
[1139,"NC_007422.5",12240247,"SNV","G","A","Homozygous",22,22,100,1,10,17,0.37,38.59,27,27,13,15,null,1,1,"no","A/A","No",1,87.7,"XP_973158.1:c.1078G>A","XP_973158.1:p.Gly360Ser","LOC661935",661935,null,"661935 [Gene Symbol: LOC661935] [Locus Tag: TcasGA2_TC008935] [Chromosome: LG7] [Map Location: ] [Description: protein NEDD1] [Gene Type: protein-coding]","TcasGA2_TC008935; LOC661935"]
[1140,"NC_007422.5",12656418,"SNV","C","G","Homozygous",21,21,100,1,10,13,0.43,38.67,23,23,11,13,null,1,1,"no","G/G","No",1,83.1,"XP_015837615.1:c.[1617G>C]; XP_008195764.1:c.[1935G>C]","XP_015837615.1:p.[Glu539Asp]; XP_008195764.1:p.[Glu645Asp]","LOC661218",661218,null,"661218 [Gene Symbol: LOC661218] [Locus Tag: TcasGA2_TC009891] [Chromosome: LG7] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC661218; TcasGA2_TC009891"]
[1141,"NC_007422.5",12657851,"SNV","T","C","Homozygous",20,22,90.91,1,5,15,0.25,38.9,20,22,11,10,null,0.9,0.97,"no","C/C","No",1,29.71,"XP_015837615.1:c.[233A>G]; XP_008195764.1:c.[551A>G]","XP_015837615.1:p.[Asp78Gly]; XP_008195764.1:p.[Asp184Gly]","LOC661218",661218,null,"661218 [Gene Symbol: LOC661218] [Locus Tag: TcasGA2_TC009891] [Chromosome: LG7] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC661218; TcasGA2_TC009891"]
[1142,"NC_007422.5",12718446,"SNV","G","C","Homozygous",19,21,90.48,0.99,10,11,0.48,37.53,21,23,12,16,null,0.98,1,"no","C/C","No",1,20.8,"XP_008196042.1:c.2600C>G","XP_008196042.1:p.Thr867Ser","LOC660426",660426,null,"660426 [Gene Symbol: LOC660426] [Locus Tag: TcasGA2_TC009883] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase] [Gene Type: protein-coding]","TcasGA2_TC009883; LOC660426"]
[1143,"NC_007422.5",12730166,"SNV","T","A","Homozygous",20,23,86.96,0.95,11,11,0.5,37.35,22,25,11,13,null,0.96,1,"no","A/A","No",1,13.38,"XP_971585.1:c.1378T>A","XP_971585.1:p.Tyr460Asn","LOC660243",660243,null,"660243 [Gene Symbol: LOC660243] [Locus Tag: TcasGA2_TC008961] [Chromosome: LG7] [Map Location: ] [Description: DNA polymerase iota] [Gene Type: protein-coding]","LOC660243; TcasGA2_TC008961"]
[1144,"NC_007422.5","12799999^12800000","Insertion","-","AAC","Heterozygous",10,23,43.48,1,6,6,0.5,36.23,12,26,5,7,-0.94,0.9,0.98,"no","complex","No",1,200,"XP_008195740.2:c.[2556_2557insAAC]; XP_008195741.2:c.[2550_2551insAAC]; XP_015837561.1:c.[537_538insAAC]; XP_015837562.1:c.[363_364insAAC]","XP_008195740.2:p.[Asn853_Lys854insAsn]; XP_008195741.2:p.[Asn851_Lys852insAsn]; XP_015837561.1:p.[Asn180_Lys181insAsn]; XP_015837562.1:p.[Asn122_Lys123insAsn]","LOC659592",659592,null,"659592 [Gene Symbol: LOC659592] [Locus Tag: TcasGA2_TC033738] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: receptor-type tyrosine-protein phosphatase epsilon-like] [Gene Type: protein-coding]","TcasGA2_TC033738; LOC659592"]
[1145,"NC_007422.5",12819855,"SNV","G","C","Homozygous",21,21,100,1,7,14,0.33,36.38,21,21,12,14,null,1,1,"no","C/C","No",1,83.12,"XP_970738.2:c.49C>G","XP_970738.2:p.Pro17Ala","LOC659328",659328,null,"659328 [Gene Symbol: LOC659328] [Locus Tag: TcasGA2_TC009877] [Chromosome: LG7] [Map Location: ] [Description: cytochrome P450 49A1] [Gene Type: protein-coding]","TcasGA2_TC009877; CYP49A1; LOC659328"]
[1146,"NC_007422.5",12970637,"SNV","G","T","Homozygous",19,23,82.61,0.51,10,9,0.47,40.11,19,23,13,10,0.36,0.97,1,"no","G/T","No",1,3.08,"XP_969198.1:c.[1410C>A]; XP_008195715.1:c.[1410C>A]; XP_008195714.1:c.[1410C>A]; XP_008195716.1:c.[1410C>A]","XP_969198.1:p.[Phe470Leu]; XP_008195715.1:p.[Phe470Leu]; XP_008195714.1:p.[Phe470Leu]; XP_008195716.1:p.[Phe470Leu]","LOC657658",657658,null,"657658 [Gene Symbol: LOC657658] [Locus Tag: TcasGA2_TC009861] [Chromosome: LG7] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","TcasGA2_TC009861; LOC657658"]
[1147,"NC_007422.5","12970659..12970660","MNV","AT","GG","Homozygous",18,20,90,1,10,11,0.48,36.64,21,23,15,11,null,1,1,"no","GG/GG","No",1,200,"XP_008195715.1:c.[1387_1388delATinsCC]; XP_969198.1:c.[1387_1388delATinsCC]; XP_008195716.1:c.[1387_1388delATinsCC]; XP_008195714.1:c.[1387_1388delATinsCC]","XP_008195715.1:p.[Ile463Pro]; XP_969198.1:p.[Ile463Pro]; XP_008195716.1:p.[Ile463Pro]; XP_008195714.1:p.[Ile463Pro]","LOC657658",657658,null,"657658 [Gene Symbol: LOC657658] [Locus Tag: TcasGA2_TC009861] [Chromosome: LG7] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","TcasGA2_TC009861; LOC657658"]
[1148,"NC_007422.5",12970897,"SNV","C","G","Homozygous",25,25,100,1,9,17,0.35,37.44,26,26,11,12,null,1,1,"no","G/G","No",1,95.14,"XP_969198.1:c.[1150G>C]; XP_008195715.1:c.[1150G>C]; XP_008195714.1:c.[1150G>C]; XP_008195716.1:c.[1150G>C]","XP_969198.1:p.[Ala384Pro]; XP_008195715.1:p.[Ala384Pro]; XP_008195714.1:p.[Ala384Pro]; XP_008195716.1:p.[Ala384Pro]","LOC657658",657658,null,"657658 [Gene Symbol: LOC657658] [Locus Tag: TcasGA2_TC009861] [Chromosome: LG7] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","TcasGA2_TC009861; LOC657658"]
[1149,"NC_007422.5","13119094^13119095","Insertion","-","CTC","Homozygous",20,20,100,1,5,16,0.24,38.05,21,21,12,14,null,1,1,"no","CTC/CTC","No",1,200,"XP_015837398.1:c.[5827_5828insGAG]; XP_015837410.1:c.[4984_4985insGAG]; XP_015837404.1:c.[5800_5801insGAG]; XP_015837401.1:c.[5815_5816insGAG]; XP_015837399.1:c.[5827_5828insGAG]; XP_015837405.1:c.[5794_5795insGAG]; XP_015837394.1:c.[5839_5840insGAG]; XP_015837403.1:c.[5812_5813insGAG]; XP_015837402.1:c.[5812_5813insGAG]; XP_015837408.1:c.[5035_5036insGAG]; XP_015837406.1:c.[5782_5783insGAG]; XP_015837409.1:c.[4993_4994insGAG]; XP_015837393.1:c.[5842_5843insGAG]; XP_015837397.1:c.[5830_5831insGAG]; XP_015837396.1:c.[5833_5834insGAG]; XP_015837395.1:c.[5833_5834insGAG]; XP_015837400.1:c.[5824_5825insGAG]","XP_015837398.1:p.[Glu1942_Asp1943insGly]; XP_015837410.1:p.[Glu1661_Asp1662insGly]; XP_015837404.1:p.[Glu1933_Asp1934insGly]; XP_015837401.1:p.[Glu1938_Asp1939insGly]; XP_015837399.1:p.[Glu1942_Asp1943insGly]; XP_015837405.1:p.[Glu1931_Asp1932insGly]; XP_015837394.1:p.[Glu1946_Asp1947insGly]; XP_015837403.1:p.[Glu1937_Asp1938insGly]; XP_015837402.1:p.[Glu1937_Asp1938insGly]; XP_015837408.1:p.[Glu1678_Asp1679insGly]; XP_015837406.1:p.[Glu1927_Asp1928insGly]; XP_015837409.1:p.[Glu1664_Asp1665insGly]; XP_015837393.1:p.[Glu1947_Asp1948insGly]; XP_015837397.1:p.[Glu1943_Asp1944insGly]; XP_015837396.1:p.[Glu1944_Asp1945insGly]; XP_015837395.1:p.[Glu1944_Asp1945insGly]; XP_015837400.1:p.[Glu1941_Asp1942insGly]","LOC663934",663934,null,"663934 [Gene Symbol: LOC663934] [Locus Tag: TcasGA2_TC010200] [Chromosome: LG7] [Map Location: ] [Description: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2] [Gene Type: protein-coding]","TcasGA2_TC010200; LOC663934"]
[1150,"NC_007422.5",13196951,"SNV","A","G","Heterozygous",10,21,47.62,1,4,9,0.31,37.1,13,24,5,5,-0.67,0.42,1,"no","A/G","No",1,82.48,"XP_008196416.1:c.7235T>C","XP_008196416.1:p.Val2412Ala","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1151,"NC_007422.5",13198557,"SNV","T","C","Homozygous",21,21,100,1,8,15,0.35,37.38,23,23,14,16,null,1,1,"no","C/C","No",1,83.12,"XP_008196416.1:c.6101A>G","XP_008196416.1:p.Asn2034Ser","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1152,"NC_007422.5",13202639,"SNV","C","T","Homozygous",20,20,100,1,15,6,0.29,39.75,21,21,11,13,null,1,1,"no","T/T","No",1,81.69,"XP_008196416.1:c.2408G>A","XP_008196416.1:p.Arg803Gln","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1153,"NC_007422.5",13204059,"SNV","A","G","Homozygous",20,20,100,1,18,3,0.14,38.9,21,21,12,15,null,1,1,"no","G/G","No",1,80.09,"XP_008196416.1:c.1244T>C","XP_008196416.1:p.Val415Ala","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1154,"NC_007422.5",13204068,"SNV","A","G","Homozygous",21,21,100,1,19,4,0.17,38.33,23,23,13,16,null,1,1,"no","G/G","No",1,83.1,"XP_008196416.1:c.1235T>C","XP_008196416.1:p.Val412Ala","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1155,"NC_007422.5",13204071,"SNV","G","A","Homozygous",20,20,100,1,18,4,0.18,37.95,22,22,13,15,null,1,1,"no","A/A","No",1,81.69,"XP_008196416.1:c.1232C>T","XP_008196416.1:p.Pro411Leu","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1156,"NC_007422.5",13283428,"SNV","G","A","Homozygous",30,30,100,1,19,16,0.46,38.03,35,35,15,16,null,1,1,"no","A/A","No",1,111.77,"XP_974872.2:c.25C>T","XP_974872.2:p.Leu9Phe","LOC663744",663744,null,"663744 [Gene Symbol: LOC663744] [Locus Tag: TcasGA2_TC010191] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663744] [Gene Type: protein-coding]","LOC663744; TcasGA2_TC010191"]
[1157,"NC_007422.5",13518852,"SNV","G","C","Heterozygous",6,21,28.57,1,2,4,0.33,39.17,6,23,3,3,1.17,0.43,0.96,"no","C/G","No",1,30.55,"XP_015837620.1:c.[1364G>C]; XP_008196395.1:c.[1364G>C]","XP_015837620.1:p.[Arg455Thr]; XP_008196395.1:p.[Arg455Thr]","LOC663442",663442,null,"663442 [Gene Symbol: LOC663442] [Locus Tag: TcasGA2_TC008640] [Chromosome: LG7] [Map Location: ] [Description: dynein beta chain, ciliary] [Gene Type: protein-coding]","TcasGA2_TC008640; LOC663442"]
[1158,"NC_007422.5",13638717,"SNV","A","G","Homozygous",19,20,95,1,17,5,0.23,37.37,22,23,9,16,null,1,1,"no","G/G","No",1,51.34,"XP_015837149.1:c.[511A>G]; XP_008196394.1:c.[1399+605A>G]","XP_015837149.1:p.Lys171Glu","LOC663273, LOC107398246","663273 , 107398246",null,"663273 [Gene Symbol: LOC663273] [Locus Tag: TcasGA2_TC008647] [Chromosome: LG7] [Map Location: ] [Description: tyrosine-protein kinase hopscotch] [Gene Type: protein-coding] || 107398246 [Gene Symbol: LOC107398246] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398246] [Gene Type: protein-coding]","hopscotch; Hop; LOC663273; TcasGA2_TC008647 || LOC107398246"]
[1159,"NC_007422.5",13640350,"SNV","G","A","Homozygous",21,21,100,1,17,4,0.19,35.67,21,21,12,19,null,1,1,"no","A/A","No",1,84.7,"XP_015837149.1:c.[2144G>A]; XP_008196394.1:c.[1400-1841G>A]","XP_015837149.1:p.Gly715Asp","LOC663273, LOC107398246","663273 , 107398246",null,"663273 [Gene Symbol: LOC663273] [Locus Tag: TcasGA2_TC008647] [Chromosome: LG7] [Map Location: ] [Description: tyrosine-protein kinase hopscotch] [Gene Type: protein-coding] || 107398246 [Gene Symbol: LOC107398246] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398246] [Gene Type: protein-coding]","hopscotch; Hop; LOC663273; TcasGA2_TC008647 || LOC107398246"]
[1160,"NC_007422.5",13653170,"SNV","G","A","Homozygous",24,28,85.71,0.95,12,18,0.4,36.83,30,37,14,12,null,0.99,1,"no","A/A","No",1,13.46,"XP_974383.1:c.161C>T","XP_974383.1:p.Pro54Leu","LOC663233",663233,null,"663233 [Gene Symbol: LOC663233] [Locus Tag: TcasGA2_TC033846] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase-like] [Gene Type: protein-coding]","LOC663233; TcasGA2_TC033846"]
[1161,"NC_007422.5",13653173,"SNV","T","C","Homozygous",28,28,100,1,14,22,0.39,36.39,36,36,16,15,null,1,1,"no","C/C","No",1,104.19,"XP_974383.1:c.158A>G","XP_974383.1:p.Asn53Ser","LOC663233",663233,null,"663233 [Gene Symbol: LOC663233] [Locus Tag: TcasGA2_TC033846] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase-like] [Gene Type: protein-coding]","LOC663233; TcasGA2_TC033846"]
[1162,"NC_007422.5",13655514,"SNV","G","T","Homozygous",20,20,100,1,6,16,0.27,35,22,22,9,10,null,1,1,"no","T/T","No",1,81.7,"XP_008196389.1:c.905C>A","XP_008196389.1:p.Ala302Glu","LOC663208",663208,null,"663208 [Gene Symbol: LOC663208] [Locus Tag: TcasGA2_TC033847] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase-like] [Gene Type: protein-coding]","TcasGA2_TC033847; LOC663208"]
[1163,"NC_007422.5",13675290,"SNV","C","T","Heterozygous",16,24,66.67,1,8,12,0.4,36.81,20,30,10,13,-0.89,0.55,0.84,"no","C/T","No",1,49.08,"XP_974256.1:c.[128C>T]; XP_015837156.1:c.[65-1031G>A]; XP_015837155.1:c.[128C>T]; XP_008196387.1:c.[290-1031G>A]","XP_974256.1:p.[Pro43Leu]; XP_015837155.1:p.[Pro43Leu]","LOC103313847, LOC663102","103313847 , 663102",null,"103313847 [Gene Symbol: LOC103313847] [Locus Tag: TcasGA2_TC010169] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313847] [Gene Type: protein-coding] || 663102 [Gene Symbol: LOC663102] [Locus Tag: TcasGA2_TC008651] [Chromosome: LG7] [Map Location: ] [Description: alpha-(1,3)-fucosyltransferase C] [Gene Type: protein-coding]","TcasGA2_TC010169; LOC103313847 || TcasGA2_TC008651; LOC663102"]
[1164,"NC_007422.5",13680120,"SNV","G","A","Homozygous",25,25,100,1,13,19,0.41,38.28,32,32,18,19,null,1,1,"no","A/A","No",1,96.73,"XP_015837074.1:c.89C>T","XP_015837074.1:p.Ser30Phe","LOC107398218",107398218,null,"107398218 [Gene Symbol: LOC107398218] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398218] [Gene Type: protein-coding]","LOC107398218"]
[1165,"NC_007422.5",13723316,"SNV","C","G","Homozygous",21,21,100,1,12,13,0.48,35.81,25,25,10,15,null,1,1,"no","G/G","No",1,83.09,"XP_015837075.1:c.4370C>G","XP_015837075.1:p.Thr1457Ser","LOC662737",662737,null,"662737 [Gene Symbol: LOC662737] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC662737] [Gene Type: protein-coding]","LOC662737"]
[1166,"NC_007422.5",13723490,"SNV","T","C","Homozygous",20,20,100,1,13,12,0.48,36.65,25,25,9,15,null,1,1,"no","C/C","No",1,80.11,"XP_015837075.1:c.4544T>C","XP_015837075.1:p.Val1515Ala","LOC662737",662737,null,"662737 [Gene Symbol: LOC662737] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC662737] [Gene Type: protein-coding]","LOC662737"]
[1167,"NC_007422.5","13740834..13740835","MNV","TC","CT","Homozygous",23,23,100,1,14,13,0.48,38.22,27,27,13,18,null,1,1,"no","CT/CT","No",1,200,"XP_015837075.1:c.6446_6447delTCinsCT","XP_015837075.1:p.Ile2149Thr","LOC662737",662737,null,"662737 [Gene Symbol: LOC662737] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC662737] [Gene Type: protein-coding]","LOC662737"]
[1168,"NC_007422.5",13825035,"SNV","T","C","Homozygous",29,29,100,1,27,5,0.16,39.17,32,32,10,22,null,1,1,"no","C/C","No",1,107.2,"XP_015837123.1:c.388A>G","XP_015837123.1:p.Ile130Val","LOC662160, LOC662089","662160 , 662089",null,"662160 [Gene Symbol: LOC662160] [Locus Tag: TcasGA2_TC008670] [Chromosome: LG7] [Map Location: ] [Description: TIMELESS-interacting protein] [Gene Type: protein-coding] || 662089 [Gene Symbol: LOC662089] [Locus Tag: TcasGA2_TC010158] [Chromosome: LG7] [Map Location: ] [Description: facilitated trehalose transporter Tret1-2 homolog] [Gene Type: protein-coding]","LOC662160; TcasGA2_TC008670 || TcasGA2_TC010158; LOC662089"]
[1169,"NC_007422.5",13838226,"SNV","C","T","Homozygous",21,21,100,1,16,7,0.3,38.9,23,23,12,15,null,1,1,"no","T/T","No",1,84.7,"XP_015837125.1:c.8G>A","XP_015837125.1:p.Ser3Asn","LOC662160, LOC662053","662160 , 662053",null,"662160 [Gene Symbol: LOC662160] [Locus Tag: TcasGA2_TC008670] [Chromosome: LG7] [Map Location: ] [Description: TIMELESS-interacting protein] [Gene Type: protein-coding] || 662053 [Gene Symbol: LOC662053] [Locus Tag: TcasGA2_TC010157] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: succinyl-CoA ligase subunit alpha, mitochondrial] [Gene Type: protein-coding]","LOC662160; TcasGA2_TC008670 || LOC662053; TcasGA2_TC010157"]
[1170,"NC_007422.5",13924221,"SNV","G","A","Homozygous",18,20,90,1,13,7,0.35,38.28,20,22,9,13,null,0.87,0.99,"no","A/A","No",1,47.4,"XP_008196345.1:c.250G>A","XP_008196345.1:p.Val84Ile","LOC661730",661730,null,"661730 [Gene Symbol: LOC661730] [Locus Tag: TcasGA2_TC008673] [Chromosome: LG7] [Map Location: ] [Description: dipeptidyl peptidase 3] [Gene Type: protein-coding]","LOC661730; TcasGA2_TC008673"]
[1171,"NC_007422.5",13937346,"SNV","T","C","Heterozygous",5,21,23.81,1,0,5,0,41,5,22,3,3,2.27,0.02,0.04,"no","complex","No",1,118.28,"XP_008196342.2:c.[692A>G]; XP_015837439.1:c.[944A>G]","XP_008196342.2:p.[Lys231Arg]; XP_015837439.1:p.[Lys315Arg]","LOC661511",661511,null,"661511 [Gene Symbol: LOC661511] [Locus Tag: TcasGA2_TC010152] [Chromosome: LG7] [Map Location: ] [Description: UDP-glucuronosyltransferase 1-9] [Gene Type: protein-coding]","TcasGA2_TC010152; LOC661511"]
[1172,"NC_007422.5",13937347,"SNV","T","C","Heterozygous",16,21,76.19,1,14,3,0.18,37.56,17,22,13,14,-2.68,0.57,0.54,"no","complex","No",1,200,"XP_015837439.1:c.[943A>G]; XP_008196342.2:c.[691A>G]","XP_015837439.1:p.[Lys315Glu]; XP_008196342.2:p.[Lys231Glu]","LOC661511",661511,null,"661511 [Gene Symbol: LOC661511] [Locus Tag: TcasGA2_TC010152] [Chromosome: LG7] [Map Location: ] [Description: UDP-glucuronosyltransferase 1-9] [Gene Type: protein-coding]","TcasGA2_TC010152; LOC661511"]
[1173,"NC_007422.5",14028147,"SNV","A","T","Homozygous",19,20,95,1,10,10,0.5,36.74,20,21,13,14,null,0.98,1,"no","T/T","No",1,53.11,"XP_015837415.1:c.[6T>A]; XP_972227.1:c.[61-10T>A]","XP_015837415.1:p.Asn2Lys","LOC660940",660940,null,"660940 [Gene Symbol: LOC660940] [Locus Tag: TcasGA2_TC010144] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC660940] [Gene Type: protein-coding]","TcasGA2_TC010144; LOC660940"]
[1174,"NC_007422.5",14032877,"SNV","C","T","Heterozygous",15,24,62.5,1,11,7,0.39,37.73,18,31,12,11,1.76,0.42,0.87,"no","C/T","No",1,61.8,"XP_972129.2:c.727G>A","XP_972129.2:p.Val243Met","LOC660833",660833,null,"660833 [Gene Symbol: LOC660833] [Locus Tag: TcasGA2_TC030761] [Chromosome: LG7] [Map Location: ] [Description: fukutin-related protein] [Gene Type: protein-coding]","LOC660833; TcasGA2_TC030761"]
[1175,"NC_007422.5",14032886,"SNV","A","G","Homozygous",24,24,100,1,13,17,0.43,37.08,30,30,17,19,null,1,1,"no","G/G","No",1,92.12,"XP_972129.2:c.718T>C","XP_972129.2:p.Ser240Pro","LOC660833",660833,null,"660833 [Gene Symbol: LOC660833] [Locus Tag: TcasGA2_TC030761] [Chromosome: LG7] [Map Location: ] [Description: fukutin-related protein] [Gene Type: protein-coding]","LOC660833; TcasGA2_TC030761"]
[1176,"NC_007422.5",15630844,"SNV","G","A","Heterozygous",6,26,23.08,0.98,2,5,0.29,38.67,7,32,3,3,1.03,0.2,0.79,"no","A/G","No",1,16.99,"XP_008198311.1:c.157C>T","XP_008198311.1:p.Pro53Ser","LOC103314328",103314328,null,"103314328 [Gene Symbol: LOC103314328] [Locus Tag: TcasGA2_TC010213] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC010213; LOC103314328"]
[1177,"NC_007422.5","15766546^15766547","Insertion","-","GGC","Homozygous",23,24,95.83,1,17,11,0.39,38.43,28,29,12,17,null,1,1,"no","GGC/GGC","No",1,200,"XP_008198217.1:c.[1065_1066insGCC]; XP_008198231.1:c.[1041_1042insGCC]; XP_015837708.1:c.[1065_1066insGCC]; XP_008198239.1:c.[1029_1030insGCC]; XP_015837710.1:c.[1077_1078insGCC]; XP_015837709.1:c.[1050_1051insGCC]","XP_008198217.1:p.[Ala355_Lys356insAla]; XP_008198231.1:p.[Ala347_Lys348insAla]; XP_015837708.1:p.[Ala355_Lys356insAla]; XP_008198239.1:p.[Ala343_Lys344insAla]; XP_015837710.1:p.[Ala359_Lys360insAla]; XP_015837709.1:p.[Ala350_Lys351insAla]","LOC655611",655611,null,"655611 [Gene Symbol: LOC655611] [Locus Tag: TcasGA2_TC010208] [Chromosome: LG7] [Map Location: ] [Description: sodium/potassium/calcium exchanger Nckx30C] [Gene Type: protein-coding]","LOC655611; TcasGA2_TC010208"]
[1178,"NC_007422.5",16168471,"SNV","A","G","Homozygous",23,23,100,1,14,9,0.39,37.57,23,23,14,16,null,1,1,"no","G/G","No",1,89.12,"XP_015837702.1:c.[1090A>G]; XP_015837703.1:c.[1090A>G]; XP_015837704.1:c.[463A>G]","XP_015837702.1:p.[Ile364Val]; XP_015837703.1:p.[Ile364Val]; XP_015837704.1:p.[Ile155Val]","LOC657033",657033,null,"657033 [Gene Symbol: LOC657033] [Locus Tag: TcasGA2_TC010221] [Chromosome: LG7] [Map Location: ] [Description: GPI ethanolamine phosphate transferase 2] [Gene Type: protein-coding]","TcasGA2_TC010221; LOC657033"]
[1179,"NC_007422.5",16443821,"SNV","T","C","Heterozygous",16,25,64,1,16,7,0.3,38.62,23,35,10,11,2.72,0.93,0.98,"no","C/T","No",1,57.8,"XP_015837700.1:c.586T>C","XP_015837700.1:p.Phe196Leu","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1180,"NC_007422.5",16443840,"SNV","A","G","Heterozygous",18,31,58.06,1,16,9,0.36,38.61,25,41,10,13,0.2,0.76,0.99,"no","A/G","No",1,92.02,"XP_015837700.1:c.605A>G","XP_015837700.1:p.Lys202Arg","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1181,"NC_007422.5",16443842,"SNV","G","T","Homozygous",28,31,90.32,1,20,15,0.43,36.68,35,39,17,20,null,0.99,1,"no","T/T","No",1,34.93,"XP_015837700.1:c.607G>T","XP_015837700.1:p.Ala203Ser","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1182,"NC_007422.5",16443875,"SNV","A","G","Heterozygous",12,28,42.86,1,9,9,0.5,37.42,18,39,8,9,-0.93,0.97,0.95,"no","A/G","No",1,88.84,"XP_015837700.1:c.640A>G","XP_015837700.1:p.Ser214Gly","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1183,"NC_007422.5",16443900,"SNV","A","G","Heterozygous",6,22,27.27,1,3,6,0.33,36.67,9,30,6,5,-1.59,0.99,1,"no","A/G","No",1,28.99,"XP_015837700.1:c.665A>G","XP_015837700.1:p.Lys222Arg","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1184,"NC_007422.5",16443902,"SNV","C","T","Homozygous",17,21,80.95,0.89,6,15,0.29,36.35,21,27,14,13,-2.64,0.96,1,"no","C/T","No",1,9.67,"XP_015837700.1:c.667C>T","XP_015837700.1:p.Pro223Ser","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1185,"NC_007422.5",16443922,"SNV","A","C","Heterozygous",17,27,62.96,1,5,16,0.24,39.24,21,35,12,12,-0.03,0.18,0.99,"no","A/C","No",1,61.39,"XP_015837700.1:c.687A>C","XP_015837700.1:p.Glu229Asp","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1186,"NC_007422.5","16443940..16443941","MNV","CT","AC","Heterozygous",7,20,35,1,2,5,0.29,36.36,7,24,4,5,-0.21,0.25,1,"yes","complex","No",1,200,"XP_015837700.1:c.705_706delCTinsAC","XP_015837700.1:p.Asn235_Phe236delinsLysLeu","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1187,"NC_007422.5",16443941,"SNV","T","C","Heterozygous",6,20,30,1,0,6,0,37.83,6,24,4,5,0.62,0.19,0.41,"yes","complex","No",1,200,"XP_015837700.1:c.706T>C","XP_015837700.1:p.Phe236Leu","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1188,"NC_007422.5",16448174,"SNV","A","C","Heterozygous",9,28,32.14,1,6,3,0.33,36.78,9,31,5,6,0.74,0.54,0.99,"no","A/C","No",1,50.26,"XP_015837727.1:c.296A>C","XP_015837727.1:p.Lys99Thr","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1189,"NC_007422.5","16448187..16448188","MNV","GG","CA","Heterozygous",6,22,27.27,1,3,3,0.5,36.67,6,27,4,4,0.79,0.85,1,"no","complex","No",1,200,"XP_015837727.1:c.309_310delGGinsCA","XP_015837727.1:p.Lys103_Asp104delinsAsnAsn","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1190,"NC_007422.5",16448267,"SNV","A","T","Heterozygous",5,22,22.73,0.97,1,5,0.17,39,6,26,3,2,1.45,0.53,0.87,"no","A/T","No",1,15.31,"XP_015837727.1:c.389A>T","XP_015837727.1:p.His130Leu","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1191,"NC_007422.5",16448293,"SNV","G","A","Heterozygous",5,21,23.81,0.98,2,4,0.33,39.8,6,22,3,3,0.66,0.59,1,"no","A/G","No",1,18.18,"XP_015837727.1:c.415G>A","XP_015837727.1:p.Asp139Asn","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1192,"NC_007422.5",16448312,"SNV","A","G","Heterozygous",11,28,39.29,1,11,1,0.08,38.73,12,29,5,8,0.68,0.05,0.1,"no","A/G","No",1,76.05,"XP_015837727.1:c.434A>G","XP_015837727.1:p.Tyr145Cys","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1193,"NC_007422.5",16448330,"SNV","A","G","Heterozygous",15,28,53.57,1,14,1,0.07,39.47,15,28,6,11,1.75,0.05,0.09,"no","A/G","No",1,100.39,"XP_015837727.1:c.452A>G","XP_015837727.1:p.Asn151Ser","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1194,"NC_007422.5",16448335,"SNV","A","G","Heterozygous",16,28,57.14,1,15,1,0.06,39.12,16,28,7,12,1.46,0.1,0.08,"no","A/G","No",1,87.72,"XP_015837727.1:c.457A>G","XP_015837727.1:p.Asn153Asp","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1195,"NC_007422.5",16448451,"SNV","C","A","Heterozygous",17,35,48.57,1,4,15,0.21,38.47,19,40,8,10,0.12,0.26,0.15,"no","A/C","No",1,128.35,"XP_015837727.1:c.573C>A","XP_015837727.1:p.Asn191Lys","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1196,"NC_007422.5",16448467,"SNV","T","G","Heterozygous",11,25,44,1,3,9,0.25,38,12,29,8,8,2.76,0.25,0.34,"no","G/T","No",1,84.01,"XP_015837727.1:c.589T>G","XP_015837727.1:p.Ser197Ala","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1197,"NC_007423.3",32023,"SNV","A","C","Homozygous",18,20,90,1,3,18,0.14,37.17,21,23,8,10,null,0.95,1,"no","C/C","No",1,23.68,"XP_015837729.1:c.[283T>G]; NP_001280527.1:c.[283T>G]; XP_008199983.1:c.[283T>G]; XP_015837731.1:c.[283T>G]; XP_015837733.1:c.[283T>G]; XP_015837730.1:c.[283T>G]; XP_015837732.1:c.[283T>G]","XP_015837729.1:p.[Cys95Gly]; NP_001280527.1:p.[Cys95Gly]; XP_008199983.1:p.[Cys95Gly]; XP_015837731.1:p.[Cys95Gly]; XP_015837733.1:p.[Cys95Gly]; XP_015837730.1:p.[Cys95Gly]; XP_015837732.1:p.[Cys95Gly]","lgl",655235,"lethal(2) giant larvae protein homolog 1","655235 [Gene Symbol: lgl] [Locus Tag: TcasGA2_TC015986] [Chromosome: LG8] [Map Location: ] [Description: lethal(2) giant larvae protein homolog 1] [Gene Type: protein-coding]","lgl; TcasGA2_TC015986"]
[1198,"NC_007423.3",168763,"SNV","G","C","Homozygous",21,21,100,1,14,7,0.33,38.1,21,21,11,12,null,1,1,"no","C/C","No",1,83.12,"XP_966433.1:c.256C>G","XP_966433.1:p.Arg86Gly","LOC655245",655245,null,"655245 [Gene Symbol: LOC655245] [Locus Tag: TcasGA2_TC015978] [Chromosome: LG8] [Map Location: ] [Description: aldehyde dehydrogenase, dimeric NADP-preferring] [Gene Type: protein-coding]","LOC655245; TcasGA2_TC015978"]
[1199,"NC_007423.3",361472,"SNV","A","T","Heterozygous",17,22,77.27,0.97,6,12,0.33,39.35,18,23,11,12,-0.16,0.74,1,"no","A/T","No",1,15.18,"XP_015837849.1:c.570A>T","XP_015837849.1:p.Gln190His","LOC100141755, LOC107398407","100141755 , 107398407",null,"100141755 [Gene Symbol: LOC100141755] [Locus Tag: TcasGA2_TC006953] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141755] [Gene Type: protein-coding] || 107398407 [Gene Symbol: LOC107398407] [Locus Tag: TcasGA2_TC006954] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398407] [Gene Type: protein-coding]","TcasGA2_TC006953; LOC100141755 || TcasGA2_TC006954; LOC107398407"]
[1200,"NC_007423.3",361878,"SNV","C","T","Heterozygous",12,20,60,1,5,9,0.36,38.92,14,22,8,8,-0.77,0.68,1,"no","C/T","No",1,60.21,"XP_015837849.1:c.919C>T","XP_015837849.1:p.Gln307*","LOC100141755, LOC107398407","100141755 , 107398407",null,"100141755 [Gene Symbol: LOC100141755] [Locus Tag: TcasGA2_TC006953] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141755] [Gene Type: protein-coding] || 107398407 [Gene Symbol: LOC107398407] [Locus Tag: TcasGA2_TC006954] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398407] [Gene Type: protein-coding]","TcasGA2_TC006953; LOC100141755 || TcasGA2_TC006954; LOC107398407"]
[1201,"NC_007423.3",361989,"Deletion","T","-","Heterozygous",14,28,50,1,10,4,0.29,38.86,14,28,9,7,-0.02,0.39,0.92,"no","-/T","Yes",9,110.14,"XP_015837849.1:c.1030delT","XP_015837849.1:p.Phe346fs","LOC100141755, LOC107398407","100141755 , 107398407",null,"100141755 [Gene Symbol: LOC100141755] [Locus Tag: TcasGA2_TC006953] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141755] [Gene Type: protein-coding] || 107398407 [Gene Symbol: LOC107398407] [Locus Tag: TcasGA2_TC006954] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398407] [Gene Type: protein-coding]","TcasGA2_TC006953; LOC100141755 || TcasGA2_TC006954; LOC107398407"]
[1202,"NC_007423.3",362005,"SNV","A","G","Heterozygous",15,28,53.57,1,10,9,0.47,37.33,19,32,9,8,0.02,0.85,1,"no","A/G","No",1,100.3,"XP_015837849.1:c.1046A>G","XP_015837849.1:p.Tyr349Cys","LOC100141755, LOC107398407","100141755 , 107398407",null,"100141755 [Gene Symbol: LOC100141755] [Locus Tag: TcasGA2_TC006953] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141755] [Gene Type: protein-coding] || 107398407 [Gene Symbol: LOC107398407] [Locus Tag: TcasGA2_TC006954] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398407] [Gene Type: protein-coding]","TcasGA2_TC006953; LOC100141755 || TcasGA2_TC006954; LOC107398407"]
[1203,"NC_007423.3",801436,"SNV","G","A","Heterozygous",9,21,42.86,1,5,8,0.38,39.78,13,30,3,4,2.17,0.36,0.97,"no","A/G","No",1,68.98,"XP_008199215.1:c.377G>A","XP_008199215.1:p.Gly126Glu","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1204,"NC_007423.3","802172^802173","Insertion","-","ATTGCC","Homozygous",26,26,100,1,20,10,0.33,39.49,30,30,16,23,null,1,1,"no","ATTGCC/ATTGCC","No",1,200,"XP_008199215.1:c.984_985insATTGCC","XP_008199215.1:p.Tyr328_Met329insIleAla","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1205,"NC_007423.3",802257,"SNV","G","A","Heterozygous",15,35,42.86,1,7,14,0.33,38.8,21,44,10,11,0.35,0.72,0.96,"no","A/G","No",1,106.24,"XP_008199215.1:c.1069G>A","XP_008199215.1:p.Glu357Lys","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1206,"NC_007423.3",802276,"SNV","T","A","Heterozygous",23,39,58.97,1,12,12,0.5,38.09,24,42,10,11,-2.07,0.94,0.75,"no","A/T","No",1,108.2,"XP_008199215.1:c.1088T>A","XP_008199215.1:p.Phe363Tyr","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1207,"NC_007423.3",802323,"SNV","A","G","Heterozygous",19,25,76,0.99,8,11,0.42,38.53,19,26,10,11,-0.7,0.98,0.98,"no","A/G","No",1,19.71,"XP_008199215.1:c.1135A>G","XP_008199215.1:p.Ile379Val","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1208,"NC_007423.3",802335,"SNV","G","A","Heterozygous",6,25,24,0.99,1,6,0.14,39.67,7,26,4,4,1.18,0.65,0.79,"no","A/G","No",1,19.71,"XP_008199215.1:c.1147G>A","XP_008199215.1:p.Glu383Lys","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1209,"NC_007423.3",1100704,"SNV","G","A","Heterozygous",13,20,65,1,8,7,0.47,37.23,15,22,7,11,-1.78,0.55,0.77,"no","A/G","No",1,47.28,"XP_015837764.1:c.2557G>A","XP_015837764.1:p.Gly853Ser","LOC107398399",107398399,null,"107398399 [Gene Symbol: LOC107398399] [Locus Tag: TcasGA2_TC002220] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398399] [Gene Type: protein-coding]","LOC107398399; TcasGA2_TC002220"]
[1210,"NC_007423.3",1880924,"SNV","T","A","Heterozygous",12,24,50,1,9,7,0.44,38.75,16,30,10,10,0.35,0.49,0.87,"no","A/T","No",1,95.87,"XP_015837928.1:c.589A>T","XP_015837928.1:p.Thr197Ser","LOC103314769",103314769,null,"103314769 [Gene Symbol: LOC103314769] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: actin-binding protein anillin] [Gene Type: protein-coding]","LOC103314769"]
[1211,"NC_007423.3",1895181,"SNV","G","A","Heterozygous",20,32,62.5,1,11,9,0.45,37.5,20,32,12,13,-1.27,0.93,1,"no","A/G","No",1,77.69,"XP_008199816.1:c.1219C>T","XP_008199816.1:p.Leu407Phe","LOC103314762",103314762,null,"103314762 [Gene Symbol: LOC103314762] [Locus Tag: TcasGA2_TC033499] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314762; TcasGA2_TC033499"]
[1212,"NC_007423.3",1895391,"SNV","C","T","Heterozygous",14,44,31.82,1,13,3,0.19,38.71,16,48,10,10,-0.94,0.75,0.56,"no","C/T","No",1,68.31,"XP_008199816.1:c.1009G>A","XP_008199816.1:p.Val337Ile","LOC103314762",103314762,null,"103314762 [Gene Symbol: LOC103314762] [Locus Tag: TcasGA2_TC033499] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314762; TcasGA2_TC033499"]
[1213,"NC_007423.3",1895691,"SNV","C","T","Heterozygous",14,33,42.42,1,6,10,0.38,37.5,16,41,11,12,0.93,0.56,0.95,"no","C/T","No",1,99.01,"XP_008199816.1:c.761G>A","XP_008199816.1:p.Arg254Gln","LOC103314762",103314762,null,"103314762 [Gene Symbol: LOC103314762] [Locus Tag: TcasGA2_TC033499] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314762; TcasGA2_TC033499"]
[1214,"NC_007423.3",1895707,"SNV","C","T","Heterozygous",12,30,40,1,7,10,0.41,37.83,17,38,8,8,-2.03,0.37,1,"no","C/T","No",1,81.98,"XP_008199816.1:c.745G>A","XP_008199816.1:p.Val249Ile","LOC103314762",103314762,null,"103314762 [Gene Symbol: LOC103314762] [Locus Tag: TcasGA2_TC033499] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314762; TcasGA2_TC033499"]
[1215,"NC_007423.3",2044196,"SNV","G","A","Heterozygous",10,24,41.67,1,5,8,0.38,35.1,13,27,4,5,-2.9,0.25,0.99,"no","A/G","No",1,53.64,"XP_015837750.1:c.589G>A","XP_015837750.1:p.Ala197Thr","LOC107398389",107398389,null,"107398389 [Gene Symbol: LOC107398389] [Locus Tag: TcasGA2_TC006079] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398389] [Gene Type: protein-coding]","LOC107398389; TcasGA2_TC006079"]
[1216,"NC_007423.3",2044221,"SNV","A","C","Heterozygous",13,23,56.52,1,5,12,0.29,38,17,28,4,5,1.05,0.38,0.72,"no","A/C","No",1,72.55,"XP_015837750.1:c.614A>C","XP_015837750.1:p.Glu205Ala","LOC107398389",107398389,null,"107398389 [Gene Symbol: LOC107398389] [Locus Tag: TcasGA2_TC006079] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398389] [Gene Type: protein-coding]","LOC107398389; TcasGA2_TC006079"]
[1217,"NC_007423.3",2044251,"SNV","A","G","Homozygous",23,23,100,1,8,16,0.33,38.43,24,24,10,11,null,1,1,"no","G/G","No",1,89.12,"XP_015837750.1:c.644A>G","XP_015837750.1:p.Lys215Arg","LOC107398389",107398389,null,"107398389 [Gene Symbol: LOC107398389] [Locus Tag: TcasGA2_TC006079] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398389] [Gene Type: protein-coding]","LOC107398389; TcasGA2_TC006079"]
[1218,"NC_007423.3",2392385,"SNV","C","T","Heterozygous",17,26,65.38,1,9,11,0.45,36.76,20,29,7,10,-1.29,0.91,0.99,"no","C/T","No",1,56.25,"XP_967599.1:c.1064G>A","XP_967599.1:p.Arg355Lys","LOC655951",655951,null,"655951 [Gene Symbol: LOC655951] [Locus Tag: TcasGA2_TC006057] [Chromosome: LG8] [Map Location: ] [Description: 4-coumarate--CoA ligase 1] [Gene Type: protein-coding]","TcasGA2_TC006057; LOC655951"]
[1219,"NC_007423.3",2392412,"SNV","T","G","Heterozygous",18,28,64.29,1,8,14,0.36,35.61,22,32,7,10,-0.43,0.67,0.98,"no","G/T","No",1,58.85,"XP_967599.1:c.1037A>C","XP_967599.1:p.Asn346Thr","LOC655951",655951,null,"655951 [Gene Symbol: LOC655951] [Locus Tag: TcasGA2_TC006057] [Chromosome: LG8] [Map Location: ] [Description: 4-coumarate--CoA ligase 1] [Gene Type: protein-coding]","TcasGA2_TC006057; LOC655951"]
[1220,"NC_007423.3",2393339,"SNV","C","A","Heterozygous",9,20,45,1,2,7,0.22,37.78,9,22,6,6,1.63,0.75,0.94,"no","A/C","No",1,68.14,"XP_967599.1:c.208G>T","XP_967599.1:p.Ala70Ser","LOC655951",655951,null,"655951 [Gene Symbol: LOC655951] [Locus Tag: TcasGA2_TC006057] [Chromosome: LG8] [Map Location: ] [Description: 4-coumarate--CoA ligase 1] [Gene Type: protein-coding]","TcasGA2_TC006057; LOC655951"]
[1221,"NC_007423.3",2418799,"SNV","G","C","Heterozygous",11,20,55,1,9,3,0.25,35.55,12,22,5,6,-2.17,0.33,0.8,"no","C/G","No",1,71.71,"XP_967996.1:c.519C>G","XP_967996.1:p.Ile173Met","LOC656365",656365,null,"656365 [Gene Symbol: LOC656365] [Locus Tag: TcasGA2_TC006053] [Chromosome: LG8] [Map Location: ] [Description: ceramide synthase 6] [Gene Type: protein-coding]","TcasGA2_TC006053; LOC656365"]
[1222,"NC_007423.3",2438992,"SNV","T","C","Homozygous",20,20,100,1,2,19,0.1,39.25,21,21,11,11,null,1,1,"no","C/C","No",1,80.12,"NP_001161929.1:c.[1951T>C]; XP_008196103.1:c.[1103+4602A>G]; XP_008196102.1:c.[1103+4602A>G]; XP_015837773.1:c.[1196+4602A>G]","NP_001161929.1:p.Ser651Pro","LOC656615, Pmp14","656615 , 100313959","peritrophic matrix protein 14","656615 [Gene Symbol: LOC656615] [Locus Tag: TcasGA2_TC006051] [Chromosome: LG8] [Map Location: ] [Description: GTPase-activating protein CdGAPr] [Gene Type: protein-coding] || 100313959 [Gene Symbol: Pmp14] [Locus Tag: TcasGA2_TC033952] [Chromosome: LG8] [Map Location: ] [Description: peritrophic matrix protein 14] [Gene Type: protein-coding]","TcasGA2_TC006051; LOC656615 || Pmp14; TcasGA2_TC033952"]
[1223,"NC_007423.3",2439360,"SNV","G","C","Heterozygous",7,20,35,1,7,0,0,40.43,7,22,3,5,1.35,0.12,0.24,"no","C/G","No",1,46.11,"XP_008196103.1:c.[1103+4234C>G]; NP_001161929.1:c.[2319G>C]; XP_015837773.1:c.[1196+4234C>G]; XP_008196102.1:c.[1103+4234C>G]","NP_001161929.1:p.Leu773Phe","LOC656615, Pmp14","656615 , 100313959","peritrophic matrix protein 14","656615 [Gene Symbol: LOC656615] [Locus Tag: TcasGA2_TC006051] [Chromosome: LG8] [Map Location: ] [Description: GTPase-activating protein CdGAPr] [Gene Type: protein-coding] || 100313959 [Gene Symbol: Pmp14] [Locus Tag: TcasGA2_TC033952] [Chromosome: LG8] [Map Location: ] [Description: peritrophic matrix protein 14] [Gene Type: protein-coding]","TcasGA2_TC006051; LOC656615 || Pmp14; TcasGA2_TC033952"]
[1224,"NC_007423.3",2454276,"SNV","T","G","Homozygous",25,25,100,1,14,12,0.46,35.8,26,26,12,16,null,1,1,"no","G/G","No",1,95.14,"XP_968377.1:c.[331T>G]; XP_015837776.1:c.[301T>G]","XP_968377.1:p.[Ser111Ala]; XP_015837776.1:p.[Ser101Ala]","LOC656777",656777,null,"656777 [Gene Symbol: LOC656777] [Locus Tag: TcasGA2_TC006099] [Chromosome: LG8] [Map Location: ] [Description: D-arabinitol dehydrogenase 1] [Gene Type: protein-coding]","TcasGA2_TC006099; LOC656777"]
[1225,"NC_007423.3",2454351,"SNV","T","A","Heterozygous",12,23,52.17,1,8,4,0.33,37.92,12,25,6,10,0.95,0.49,0.46,"no","A/T","No",1,88.79,"XP_015837776.1:c.[376T>A]; XP_968377.1:c.[406T>A]","XP_015837776.1:p.[Ser126Thr]; XP_968377.1:p.[Ser136Thr]","LOC656777",656777,null,"656777 [Gene Symbol: LOC656777] [Locus Tag: TcasGA2_TC006099] [Chromosome: LG8] [Map Location: ] [Description: D-arabinitol dehydrogenase 1] [Gene Type: protein-coding]","TcasGA2_TC006099; LOC656777"]
[1226,"NC_007423.3",2503044,"SNV","C","G","Homozygous",21,21,100,1,4,17,0.19,37.71,21,21,12,14,null,1,1,"no","G/G","No",1,83.1,"XP_008196114.1:c.[1503G>C]; XP_008196113.1:c.[1512G>C]","XP_008196114.1:p.[Glu501Asp]; XP_008196113.1:p.[Glu504Asp]","LOC107398401, LOC657818","107398401 , 657818",null,"107398401 [Gene Symbol: LOC107398401] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized protein C3orf18-like] [Gene Type: protein-coding] || 657818 [Gene Symbol: LOC657818] [Locus Tag: TcasGA2_TC006044] [Chromosome: LG8] [Map Location: ] [Description: flap endonuclease GEN] [Gene Type: protein-coding]","LOC107398401 || LOC657818; TcasGA2_TC006044"]
[1227,"NC_007423.3",2533347,"SNV","A","T","Homozygous",21,21,100,1,7,15,0.32,37.52,22,22,9,13,null,1,1,"no","T/T","No",1,84.71,"XP_008196116.1:c.3022T>A","XP_008196116.1:p.Phe1008Ile","LOC658295",658295,null,"658295 [Gene Symbol: LOC658295] [Locus Tag: TcasGA2_TC006042] [Chromosome: LG8] [Map Location: ] [Description: histone-lysine N-methyltransferase eggless] [Gene Type: protein-coding]","LOC658295; TcasGA2_TC006042"]
[1228,"NC_007423.3",2566613,"SNV","T","C","Homozygous",21,21,100,1,10,12,0.45,37.52,22,22,13,14,null,1,1,"no","C/C","No",1,83.13,"XP_008196078.1:c.1164A>G","XP_008196078.1:p.Ile388Met","LOC658742",658742,null,"658742 [Gene Symbol: LOC658742] [Locus Tag: TcasGA2_TC006039] [Chromosome: LG8] [Map Location: ] [Description: N-acetylglucosamine-1-phosphotransferase subunits alpha/beta] [Gene Type: protein-coding]","TcasGA2_TC006039; LOC658742"]
[1229,"NC_007423.3",2569659,"SNV","T","G","Homozygous",23,23,100,1,19,4,0.17,39.87,23,23,9,17,null,1,1,"no","G/G","No",1,89.12,"XP_008196119.1:c.1565A>C","XP_008196119.1:p.Asn522Thr","LOC658811",658811,null,"658811 [Gene Symbol: LOC658811] [Locus Tag: TcasGA2_TC006038] [Chromosome: LG8] [Map Location: ] [Description: probable ATP-dependent RNA helicase DDX55 homolog] [Gene Type: protein-coding]","LOC658811; TcasGA2_TC006038"]
[1230,"NC_007423.3",2621895,"SNV","G","A","Heterozygous",5,21,23.81,0.98,1,5,0.17,38.2,6,22,3,2,0.29,0.37,0.45,"no","A/G","No",1,18.23,"XP_001812052.1:c.620G>A","XP_001812052.1:p.Ser207Asn","LOC100141950",100141950,null,"100141950 [Gene Symbol: LOC100141950] [Locus Tag: TcasGA2_TC033955] [Chromosome: LG8] [Map Location: ] [Description: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial] [Gene Type: protein-coding]","LOC100141950; TcasGA2_TC033955"]
[1231,"NC_007423.3",2621915,"SNV","G","A","Heterozygous",18,24,75,1,15,3,0.17,39.06,18,24,10,13,1.43,0.81,0.64,"no","A/G","No",1,23.43,"XP_001812052.1:c.640G>A","XP_001812052.1:p.Val214Ile","LOC100141950",100141950,null,"100141950 [Gene Symbol: LOC100141950] [Locus Tag: TcasGA2_TC033955] [Chromosome: LG8] [Map Location: ] [Description: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial] [Gene Type: protein-coding]","LOC100141950; TcasGA2_TC033955"]
[1232,"NC_007423.3",2622094,"SNV","G","T","Heterozygous",9,21,42.86,1,6,4,0.4,37.33,10,27,5,5,-0.75,0.86,1,"no","G/T","No",1,65.55,"XP_008196139.1:c.[1370C>A]; XP_015837857.1:c.[1382C>A]; XP_008196136.1:c.[1382C>A]; XP_008196137.1:c.[1382C>A]; XP_008196138.1:c.[1382C>A]","XP_008196139.1:p.[Ser457*]; XP_015837857.1:p.[Ser461*]; XP_008196136.1:p.[Ser461*]; XP_008196137.1:p.[Ser461*]; XP_008196138.1:p.[Ser461*]","LOC659402",659402,null,"659402 [Gene Symbol: LOC659402] [Locus Tag: TcasGA2_TC006034] [Chromosome: LG8] [Map Location: ] [Description: chymotrypsin-C] [Gene Type: protein-coding]","LOC659402; TcasGA2_TC006034"]
[1233,"NC_007423.3",2625794,"SNV","G","A","Heterozygous",13,31,41.94,1,0,13,0,39.54,13,36,8,7,-0.04,0.23,0.26,"no","A/G","No",1,92.03,"XP_015837857.1:c.[649C>T]; XP_008196136.1:c.[649C>T]; XP_008196138.1:c.[649C>T]; XP_008196139.1:c.[649C>T]; XP_008196137.1:c.[649C>T]","XP_015837857.1:p.[Pro217Ser]; XP_008196136.1:p.[Pro217Ser]; XP_008196138.1:p.[Pro217Ser]; XP_008196139.1:p.[Pro217Ser]; XP_008196137.1:p.[Pro217Ser]","LOC659402",659402,null,"659402 [Gene Symbol: LOC659402] [Locus Tag: TcasGA2_TC006034] [Chromosome: LG8] [Map Location: ] [Description: chymotrypsin-C] [Gene Type: protein-coding]","LOC659402; TcasGA2_TC006034"]
[1234,"NC_007423.3",2628079,"SNV","A","G","Heterozygous",16,22,72.73,1,2,16,0.11,37.94,18,24,7,11,-0.66,0.81,0.94,"no","A/G","No",1,28.11,"XP_008196136.1:c.[569T>C]; XP_008196139.1:c.[569T>C]; XP_008196137.1:c.[569T>C]; XP_008196138.1:c.[569T>C]; XP_015837857.1:c.[569T>C]","XP_008196136.1:p.[Phe190Ser]; XP_008196139.1:p.[Phe190Ser]; XP_008196137.1:p.[Phe190Ser]; XP_008196138.1:p.[Phe190Ser]; XP_015837857.1:p.[Phe190Ser]","LOC659402",659402,null,"659402 [Gene Symbol: LOC659402] [Locus Tag: TcasGA2_TC006034] [Chromosome: LG8] [Map Location: ] [Description: chymotrypsin-C] [Gene Type: protein-coding]","LOC659402; TcasGA2_TC006034"]
[1235,"NC_007423.3",2875596,"SNV","C","T","Heterozygous",13,20,65,1,4,9,0.31,37.38,13,21,8,9,2.46,0.92,1,"no","C/T","No",1,47.41,"XP_008196161.1:c.4168G>A","XP_008196161.1:p.Gly1390Ser","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1236,"NC_007423.3",2876460,"SNV","T","G","Homozygous",20,20,100,1,10,15,0.4,36.3,25,25,9,11,null,1,1,"no","G/G","No",1,80.08,"XP_008196161.1:c.3304A>C","XP_008196161.1:p.Asn1102His","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1237,"NC_007423.3",2876463,"SNV","T","G","Homozygous",21,21,100,1,11,15,0.42,37.33,26,26,10,12,null,1,1,"no","G/G","No",1,83.1,"XP_008196161.1:c.3301A>C","XP_008196161.1:p.Asn1101His","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1238,"NC_007423.3",2893197,"SNV","C","T","Heterozygous",11,27,40.74,1,7,4,0.36,36.09,11,30,6,7,0.64,0.6,0.56,"no","C/T","No",1,77.75,"XP_008196161.1:c.1174G>A","XP_008196161.1:p.Glu392Lys","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1239,"NC_007423.3",2919718,"SNV","C","G","Heterozygous",9,23,39.13,1,0,9,0,36,9,26,5,5,-1.48,0.21,0.14,"no","C/G","No",1,63.38,"XP_001813387.1:c.905G>C","XP_001813387.1:p.Gly302Ala","LOC100141949",100141949,null,"100141949 [Gene Symbol: LOC100141949] [Locus Tag: TcasGA2_TC006020] [Chromosome: LG8] [Map Location: ] [Description: Meckel syndrome type 1 protein] [Gene Type: protein-coding]","LOC100141949; TcasGA2_TC006020"]
[1240,"NC_007423.3",2922040,"SNV","T","C","Homozygous",22,23,95.65,1,19,3,0.14,38.27,22,23,12,13,null,1,1,"no","C/C","No",1,61.55,"XP_972541.1:c.956T>C","XP_972541.1:p.Val319Ala","LOC661276",661276,null,"661276 [Gene Symbol: LOC661276] [Locus Tag: TcasGA2_TC006133] [Chromosome: LG8] [Map Location: ] [Description: rhomboid-related protein 2] [Gene Type: protein-coding]","LOC661276; TcasGA2_TC006133"]
[1241,"NC_007423.3",3434913,"SNV","T","C","Homozygous",21,21,100,1,11,10,0.48,37.29,21,21,12,16,null,1,1,"no","C/C","No",1,83.13,"XP_015837925.1:c.[349T>C]; XP_008196167.1:c.[343T>C]","XP_015837925.1:p.[Ser117Pro]; XP_008196167.1:p.[Ser115Pro]","LOC661691",661691,null,"661691 [Gene Symbol: LOC661691] [Locus Tag: TcasGA2_TC006139] [Chromosome: LG8] [Map Location: ] [Description: multiple inositol polyphosphate phosphatase 1] [Gene Type: protein-coding]","LOC661691; TcasGA2_TC006139"]
[1242,"NC_007423.3",3680487,"SNV","C","T","Heterozygous",6,21,28.57,1,5,1,0.17,39.33,6,21,4,5,-0.12,0.57,0.83,"no","C/T","No",1,30.72,"XP_015837946.1:c.[548C>T]; XP_015837947.1:c.[548C>T]; XP_015837948.1:c.[548C>T]","XP_015837946.1:p.[Thr183Ile]; XP_015837947.1:p.[Thr183Ile]; XP_015837948.1:p.[Thr183Ile]","LOC107398426",107398426,null,"107398426 [Gene Symbol: LOC107398426] [Locus Tag: TcasGA2_TC006145] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398426] [Gene Type: protein-coding]","LOC107398426; TcasGA2_TC006145"]
[1243,"NC_007423.3",3680492,"SNV","C","T","Heterozygous",6,22,27.27,1,5,1,0.17,37.83,6,22,4,5,-0.48,0.08,0.85,"no","C/T","No",1,27.84,"XP_015837948.1:c.[553C>T]; XP_015837947.1:c.[553C>T]; XP_015837946.1:c.[553C>T]","XP_015837948.1:p.[His185Tyr]; XP_015837947.1:p.[His185Tyr]; XP_015837946.1:p.[His185Tyr]","LOC107398426",107398426,null,"107398426 [Gene Symbol: LOC107398426] [Locus Tag: TcasGA2_TC006145] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398426] [Gene Type: protein-coding]","LOC107398426; TcasGA2_TC006145"]
[1244,"NC_007423.3",3680568,"SNV","G","A","Heterozygous",9,38,23.68,0.99,2,7,0.22,39.44,9,47,5,7,1.25,0.13,0.88,"no","A/G","No",1,21.68,"XP_015837946.1:c.[629G>A]; XP_015837948.1:c.[629G>A]; XP_015837947.1:c.[629G>A]","XP_015837946.1:p.[Gly210Glu]; XP_015837948.1:p.[Gly210Glu]; XP_015837947.1:p.[Gly210Glu]","LOC107398426",107398426,null,"107398426 [Gene Symbol: LOC107398426] [Locus Tag: TcasGA2_TC006145] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398426] [Gene Type: protein-coding]","LOC107398426; TcasGA2_TC006145"]
[1245,"NC_007423.3",3738858,"SNV","T","A","Heterozygous",14,20,70,1,11,4,0.27,37.07,15,22,9,9,-1.15,0.98,1,"no","A/T","No",1,33.51,"XP_008196171.1:c.284A>T","XP_008196171.1:p.Tyr95Phe","LOC103313783",103313783,null,"103313783 [Gene Symbol: LOC103313783] [Locus Tag: TcasGA2_TC033966] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313783] [Gene Type: protein-coding]","TcasGA2_TC033966; LOC103313783"]
[1246,"NC_007423.3",3810813,"SNV","A","T","Homozygous",21,21,100,1,9,13,0.41,37.76,22,22,16,16,null,1,1,"no","T/T","No",1,84.7,"XP_973079.1:c.1374A>T","XP_973079.1:p.Lys458Asn","LOC661854",661854,null,"661854 [Gene Symbol: LOC661854] [Locus Tag: TcasGA2_TC006147] [Chromosome: LG8] [Map Location: ] [Description: U3 small nucleolar RNA-associated protein 14 homolog A] [Gene Type: protein-coding]","LOC661854; TcasGA2_TC006147"]
[1247,"NC_007423.3",3835190,"SNV","A","C","Homozygous",25,25,100,1,12,16,0.43,38.4,28,28,14,15,null,1,1,"no","C/C","No",1,95.16,"XP_973164.1:c.607T>G","XP_973164.1:p.Ser203Ala","LOC661941",661941,null,"661941 [Gene Symbol: LOC661941] [Locus Tag: TcasGA2_TC005997] [Chromosome: LG8] [Map Location: ] [Description: tektin-4] [Gene Type: protein-coding]","LOC661941; TcasGA2_TC005997"]
[1248,"NC_007423.3",4018734,"SNV","C","T","Homozygous",21,21,100,1,11,14,0.44,37.76,25,25,14,15,null,1,1,"no","T/T","No",1,84.71,"XP_008196185.1:c.[49+6878G>A]; XP_973510.1:c.[623C>T]","XP_973510.1:p.Thr208Ile","LOC662235, LOC662311","662235 , 662311",null,"662235 [Gene Symbol: LOC662235] [Locus Tag: TcasGA2_TC005994] [Chromosome: LG8] [Map Location: ] [Description: Ig-like and fibronectin type-III domain-containing protein 1] [Gene Type: protein-coding] || 662311 [Gene Symbol: LOC662311] [Locus Tag: TcasGA2_TC006158] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC662311] [Gene Type: protein-coding]","TcasGA2_TC005994; LOC662235 || LOC662311; TcasGA2_TC006158"]
[1249,"NC_007423.3",4170925,"SNV","A","T","Homozygous",20,20,100,1,14,9,0.39,37.5,23,23,12,12,null,1,1,"no","T/T","No",1,81.7,"XP_015837815.1:c.[682T>A]; XP_973796.1:c.[841T>A]","XP_015837815.1:p.[Trp228Arg]; XP_973796.1:p.[Trp281Arg]","LOC662617",662617,null,"662617 [Gene Symbol: LOC662617] [Locus Tag: TcasGA2_TC005987] [Chromosome: LG8] [Map Location: ] [Description: putative RNA-binding protein Luc7-like 2] [Gene Type: protein-coding]","LOC662617; TcasGA2_TC005987"]
[1250,"NC_007423.3",4262591,"SNV","G","T","Homozygous",20,20,100,1,13,7,0.35,37.5,20,20,11,9,null,1,1,"no","T/T","No",1,81.69,"XP_008196203.1:c.[1232C>A]; XP_008196204.1:c.[1220C>A]","XP_008196203.1:p.[Ala411Asp]; XP_008196204.1:p.[Ala407Asp]","LOC103313798",103313798,null,"103313798 [Gene Symbol: LOC103313798] [Locus Tag: TcasGA2_TC005978] [Chromosome: LG8] [Map Location: ] [Description: ankyrin-3] [Gene Type: protein-coding]","LOC103313798; TcasGA2_TC005978"]
[1251,"NC_007423.3",4592942,"SNV","T","C","Homozygous",20,20,100,1,14,8,0.36,36.5,22,22,15,14,null,1,1,"no","C/C","No",1,80.11,"XP_966477.1:c.221T>C","XP_966477.1:p.Phe74Ser","LOC654943",654943,null,"654943 [Gene Symbol: LOC654943] [Locus Tag: TcasGA2_TC006182] [Chromosome: LG8] [Map Location: ] [Description: protein msta, isoform B] [Gene Type: protein-coding]","LOC654943; TcasGA2_TC006182"]
[1252,"NC_007423.3","4606920^4606921","Insertion","-","TTT","Homozygous",23,23,100,1,8,18,0.31,36.43,26,26,15,15,null,1,1,"no","TTT/TTT","No",1,200,"XP_008201675.1:c.489_490insAAA","XP_008201675.1:p.Lys163_Ser164insLys","LOC100142315",100142315,null,"100142315 [Gene Symbol: LOC100142315] [Locus Tag: TcasGA2_TC005967] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC100142315; TcasGA2_TC005967"]
[1253,"NC_007423.3",4755777,"SNV","G","A","Homozygous",21,21,100,1,14,8,0.36,36.14,22,22,12,17,null,1,1,"no","A/A","No",1,84.7,"XP_967600.2:c.1211G>A","XP_967600.2:p.Gly404Asp","LOC655952",655952,null,"655952 [Gene Symbol: LOC655952] [Locus Tag: TcasGA2_TC006188] [Chromosome: LG8] [Map Location: ] [Description: DNA-directed RNA polymerase, mitochondrial] [Gene Type: protein-coding]","LOC655952; TcasGA2_TC006188"]
[1254,"NC_007423.3","4873553..4873555","Deletion","TTT","-","Homozygous",23,23,100,1,14,14,0.5,36.91,28,28,17,18,null,1,1,"no","-/-","No",1,200,"XP_008196467.1:c.206_208delAAA","XP_008196467.1:p.Lys69del","LOC657429, LOC656957","657429 , 656957",null,"657429 [Gene Symbol: LOC657429] [Locus Tag: TcasGA2_TC006200] [Chromosome: LG8] [Map Location: ] [Description: brefeldin A-inhibited guanine nucleotide-exchange protein 3] [Gene Type: protein-coding] || 656957 [Gene Symbol: LOC656957] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: cathepsin B-like cysteine proteinase 4] [Gene Type: protein-coding]","TcasGA2_TC006200; LOC657429 || LOC656957"]
[1255,"NC_007423.3",5453833,"SNV","A","G","Homozygous",28,34,82.35,0.78,14,18,0.44,38.21,32,38,22,22,0.5,1,1,"no","G/G","No",1,6.49,"XP_015837883.1:c.3605A>G","XP_015837883.1:p.Lys1202Arg","LOC660732",660732,null,"660732 [Gene Symbol: LOC660732] [Locus Tag: TcasGA2_TC006228] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660732] [Gene Type: protein-coding]","LOC660732; TcasGA2_TC006228"]
[1256,"NC_007423.3",5474747,"SNV","A","G","Homozygous",22,22,100,1,10,18,0.36,35.64,28,28,9,11,null,1,1,"no","G/G","No",1,86.11,"XP_972136.1:c.452T>C","XP_972136.1:p.Val151Ala","LOC660840",660840,null,"660840 [Gene Symbol: LOC660840] [Locus Tag: TcasGA2_TC005925] [Chromosome: LG8] [Map Location: ] [Description: serine protease H65] [Gene Type: protein-coding]","LOC660840; H65; TcasGA2_TC005925"]
[1257,"NC_007423.3",5740018,"SNV","T","C","Homozygous",22,22,100,1,10,17,0.37,37.23,27,27,12,16,null,1,1,"no","C/C","No",1,86.13,"XP_015837865.1:c.[1164T>C]; XP_008196576.2:c.[981T>C]; XP_015837866.1:c.[1114T>C]","XP_015837866.1:p.[Phe372Leu]","LOC103313893",103313893,null,"103313893 [Gene Symbol: LOC103313893] [Locus Tag: TcasGA2_TC006244] [Chromosome: LG8] [Map Location: ] [Description: TWiK family of potassium channels protein 7] [Gene Type: protein-coding]","LOC103313893; TcasGA2_TC006244"]
[1258,"NC_007423.3",5776684,"SNV","C","T","Homozygous",21,21,100,1,8,18,0.31,35.9,26,26,13,14,null,1,1,"no","T/T","No",1,81.7,"XP_008196580.1:c.619G>A","XP_008196580.1:p.Glu207Lys","LOC662132",662132,null,"662132 [Gene Symbol: LOC662132] [Locus Tag: TcasGA2_TC005906] [Chromosome: LG8] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC662132; TcasGA2_TC005906"]
[1259,"NC_007423.3",5779604,"SNV","C","A","Homozygous",20,20,100,1,15,5,0.25,38.55,20,20,10,13,null,1,1,"no","A/A","No",1,81.69,"XP_015837880.1:c.[141C>A]; XP_008196536.1:c.[141C>A]","XP_015837880.1:p.[His47Gln]; XP_008196536.1:p.[His47Gln]","LOC662272",662272,null,"662272 [Gene Symbol: LOC662272] [Locus Tag: TcasGA2_TC006248] [Chromosome: LG8] [Map Location: ] [Description: centrosomal protein of 162 kDa] [Gene Type: protein-coding]","TcasGA2_TC006248; LOC662272"]
[1260,"NC_007423.3",5882063,"SNV","G","A","Homozygous",20,20,100,1,9,11,0.45,38.85,20,20,16,14,null,1,1,"no","A/A","No",1,81.69,"XP_008196554.1:c.[1352C>T]; XP_008196552.1:c.[1352C>T]; XP_015837920.1:c.[1352C>T]; XP_008196555.1:c.[1352C>T]","XP_008196554.1:p.[Thr451Ile]; XP_008196552.1:p.[Thr451Ile]; XP_015837920.1:p.[Thr451Ile]; XP_008196555.1:p.[Thr451Ile]","LOC662744",662744,null,"662744 [Gene Symbol: LOC662744] [Locus Tag: TcasGA2_TC005897] [Chromosome: LG8] [Map Location: ] [Description: transmembrane channel-like protein 3] [Gene Type: protein-coding]","LOC662744; TcasGA2_TC005897"]
[1261,"NC_007423.3",6024548,"SNV","A","C","Homozygous",21,21,100,1,10,13,0.43,37.29,23,23,14,17,null,1,1,"no","C/C","No",1,83.12,"XP_968075.2:c.566T>G","XP_968075.2:p.Ile189Ser","LOC656451",656451,null,"656451 [Gene Symbol: LOC656451] [Locus Tag: TcasGA2_TC005884] [Chromosome: LG8] [Map Location: ] [Description: heat shock 70 kDa protein II] [Gene Type: protein-coding]","LOC656451; TcasGA2_TC005884"]
[1262,"NC_007423.3",6034610,"SNV","A","G","Homozygous",21,21,100,1,13,9,0.41,37.29,22,22,11,16,null,1,1,"no","G/G","No",1,83.1,"XP_008196586.1:c.584A>G","XP_008196586.1:p.His195Arg","LOC103313898",103313898,null,"103313898 [Gene Symbol: LOC103313898] [Locus Tag: TcasGA2_TC006269] [Chromosome: LG8] [Map Location: ] [Description: elastase-1] [Gene Type: protein-coding]","LOC103313898; H73; TcasGA2_TC006269"]
[1263,"NC_007423.3",6644769,"SNV","G","A","Homozygous",20,20,100,1,8,13,0.38,37.9,21,21,13,14,null,1,1,"no","A/A","No",1,81.69,"XP_008196688.2:c.668G>A","XP_008196688.2:p.Ser223Asn","LOC660947",660947,null,"660947 [Gene Symbol: LOC660947] [Locus Tag: TcasGA2_TC006293] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: UPF0764 protein C16orf89 homolog] [Gene Type: protein-coding]","TcasGA2_TC006293; LOC660947"]
[1264,"NC_007423.3",6990620,"SNV","T","G","Homozygous",21,21,100,1,12,9,0.43,38.24,21,21,10,15,null,1,1,"no","G/G","No",1,83.1,"XP_015838019.1:c.[1812T>G]; XP_015838021.1:c.[1806T>G]; XP_008196691.1:c.[1812T>G]; XP_015838020.1:c.[1812T>G]","XP_015838019.1:p.[Asp604Glu]; XP_015838021.1:p.[Asp602Glu]; XP_008196691.1:p.[Asp604Glu]; XP_015838020.1:p.[Asp604Glu]","LOC661809",661809,null,"661809 [Gene Symbol: LOC661809] [Locus Tag: TcasGA2_TC034037] [Chromosome: LG8] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","LOC661809; TcasGA2_TC034037"]
[1265,"NC_007423.3",7000881,"SNV","C","T","Heterozygous",27,103,26.21,1,17,12,0.41,39.19,29,114,18,23,-0.12,0.59,0.6,"no","C/T","No",1,72.01,"XP_008194622.1:c.[2069G>A]; XP_008194621.1:c.[2294G>A]","XP_008194622.1:p.[Ser690Asn]; XP_008194621.1:p.[Ser765Asn]","LOC103313361",103313361,null,"103313361 [Gene Symbol: LOC103313361] [Locus Tag: TcasGA2_TC015228] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313361] [Gene Type: protein-coding]","TcasGA2_TC015228; LOC103313361"]
[1266,"NC_007423.3",7000999,"SNV","T","C","Heterozygous",56,111,50.45,1,38,23,0.38,38.98,61,124,35,39,0.18,0.97,0.97,"no","C/T","No",1,200,"XP_008194622.1:c.[1951A>G]; XP_008194621.1:c.[2176A>G]","XP_008194622.1:p.[Asn651Asp]; XP_008194621.1:p.[Asn726Asp]","LOC103313361",103313361,null,"103313361 [Gene Symbol: LOC103313361] [Locus Tag: TcasGA2_TC015228] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313361] [Gene Type: protein-coding]","TcasGA2_TC015228; LOC103313361"]
[1267,"NC_007423.3",7025391,"SNV","C","T","Homozygous",20,20,100,1,7,17,0.29,38.05,24,24,11,14,null,1,1,"no","T/T","No",1,81.7,"XP_972482.1:c.733G>A","XP_972482.1:p.Ala245Thr","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1268,"NC_007423.3",7025415,"SNV","G","A","Homozygous",22,22,100,1,9,19,0.32,38.32,28,28,14,15,null,1,1,"no","A/A","No",1,87.7,"XP_972482.1:c.709C>T","XP_972482.1:p.His237Tyr","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1269,"NC_007423.3",7027834,"SNV","A","T","Homozygous",20,20,100,1,12,17,0.41,36.5,29,29,12,14,null,1,1,"no","T/T","No",1,81.7,"XP_972529.1:c.[1065-105A>T]; XP_008194624.1:c.[1103A>T]","XP_008194624.1:p.*368Leu","LOC661264",661264,null,"661264 [Gene Symbol: LOC661264] [Locus Tag: TcasGA2_TC015484] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase Chk2] [Gene Type: protein-coding]","LOC661264; TcasGA2_TC015484"]
[1270,"NC_007423.3",7062000,"SNV","G","C","Homozygous",20,20,100,1,10,11,0.48,39.05,21,21,12,13,null,1,1,"no","C/C","No",1,80.12,"XP_008194628.1:c.914G>C","XP_008194628.1:p.Ser305Thr","LOC661596",661596,null,"661596 [Gene Symbol: LOC661596] [Locus Tag: TcasGA2_TC015487] [Chromosome: LG8] [Map Location: ] [Description: cytochrome P450 9e2] [Gene Type: protein-coding]","LOC661596; TcasGA2_TC015487; CYP9Z7"]
[1271,"NC_007423.3",7084400,"SNV","A","G","Homozygous",21,21,100,1,11,16,0.41,38.86,27,27,14,14,null,1,1,"no","G/G","No",1,83.1,"XP_008196695.1:c.2170A>G","XP_008196695.1:p.Ile724Val","LOC655218",655218,null,"655218 [Gene Symbol: LOC655218] [Locus Tag: TcasGA2_TC006310] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase ATR] [Gene Type: protein-coding]","LOC655218; TcasGA2_TC006310; ATR; mei-41"]
[1272,"NC_007423.3",7121056,"SNV","G","A","Homozygous",25,25,100,1,18,11,0.38,38.8,29,29,17,18,null,1,1,"no","A/A","No",1,96.73,"XP_008196698.1:c.2447G>A","XP_008196698.1:p.Ser816Asn","LOC655542",655542,null,"655542 [Gene Symbol: LOC655542] [Locus Tag: TcasGA2_TC006313] [Chromosome: LG8] [Map Location: ] [Description: ribosome biogenesis protein BMS1 homolog] [Gene Type: protein-coding]","TcasGA2_TC006313; LOC655542"]
[1273,"NC_007423.3",7121521,"SNV","C","A","Homozygous",26,26,100,1,12,14,0.46,38.04,26,26,16,19,null,1,1,"no","A/A","No",1,99.74,"XP_008196698.1:c.2912C>A","XP_008196698.1:p.Ala971Glu","LOC655542",655542,null,"655542 [Gene Symbol: LOC655542] [Locus Tag: TcasGA2_TC006313] [Chromosome: LG8] [Map Location: ] [Description: ribosome biogenesis protein BMS1 homolog] [Gene Type: protein-coding]","TcasGA2_TC006313; LOC655542"]
[1274,"NC_007423.3",7122159,"SNV","G","A","Homozygous",22,22,100,1,12,12,0.5,37.73,24,24,12,12,null,1,1,"no","A/A","No",1,87.71,"XP_008196698.1:c.3500G>A","XP_008196698.1:p.Arg1167Lys","LOC655542",655542,null,"655542 [Gene Symbol: LOC655542] [Locus Tag: TcasGA2_TC006313] [Chromosome: LG8] [Map Location: ] [Description: ribosome biogenesis protein BMS1 homolog] [Gene Type: protein-coding]","TcasGA2_TC006313; LOC655542"]
[1275,"NC_007423.3",7123947,"SNV","A","C","Homozygous",20,20,100,1,5,15,0.25,38.95,20,20,9,12,null,1,1,"no","C/C","No",1,80.12,"XP_015838034.1:c.538T>G","XP_015838034.1:p.Phe180Val","LOC107398451",107398451,null,"107398451 [Gene Symbol: LOC107398451] [Locus Tag: TcasGA2_TC005828] [Chromosome: LG8] [Map Location: ] [Description: zinc finger protein 142-like] [Gene Type: protein-coding]","LOC107398451; TcasGA2_TC005828"]
[1276,"NC_007423.3",7141397,"SNV","A","T","Homozygous",25,25,100,1,13,12,0.48,37,25,25,12,16,null,1,1,"no","T/T","No",1,96.73,"XP_976162.1:c.658A>T","XP_976162.1:p.Thr220Ser","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1277,"NC_007423.3",7141639,"SNV","G","C","Homozygous",21,21,100,1,11,16,0.41,36.81,27,27,13,15,null,1,1,"no","C/C","No",1,83.12,"XP_976162.1:c.853G>C","XP_976162.1:p.Ala285Pro","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1278,"NC_007423.3",7143691,"SNV","C","T","Homozygous",20,20,100,1,4,18,0.18,38.55,22,22,11,11,null,1,1,"no","T/T","No",1,81.69,"XP_976162.1:c.2725C>T","XP_976162.1:p.Leu909Phe","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1279,"NC_007423.3",7144080,"SNV","G","C","Homozygous",24,24,100,1,14,13,0.48,39.17,27,27,13,16,null,1,1,"no","C/C","No",1,92.15,"XP_976162.1:c.3114G>C","XP_976162.1:p.Glu1038Asp","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1280,"NC_007423.3",7144226,"SNV","C","G","Homozygous",21,21,100,1,5,16,0.24,36.38,21,21,12,12,null,1,1,"no","G/G","No",1,83.09,"XP_976162.1:c.3260C>G","XP_976162.1:p.Ala1087Gly","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1281,"NC_007423.3",7144276,"SNV","T","C","Homozygous",25,25,100,1,13,13,0.5,38.44,26,26,13,16,null,1,1,"no","C/C","No",1,95.16,"XP_976162.1:c.3310T>C","XP_976162.1:p.Phe1104Leu","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1282,"NC_007423.3",7146021,"SNV","A","G","Homozygous",29,29,100,1,12,22,0.35,39,34,34,16,13,null,1,1,"no","G/G","No",1,107.18,"XP_976162.1:c.4519A>G","XP_976162.1:p.Ile1507Val","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1283,"NC_007423.3","7146069..7146071","MNV","CAG","GCT","Homozygous",33,33,100,1,17,17,0.5,38.26,34,34,19,18,null,1,1,"no","GCT/GCT","No",1,200,"XP_976162.1:c.4567_4569delCAGinsGCT","XP_976162.1:p.Gln1523Ala","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1284,"NC_007423.3",7220145,"SNV","A","G","Heterozygous",16,22,72.73,1,12,4,0.25,36.31,16,22,8,9,-1.73,0.77,1,"no","A/G","No",1,28.06,"XP_968621.1:c.[134T>C]; XP_015838178.1:c.[134T>C]","XP_968621.1:p.[Val45Ala]; XP_015838178.1:p.[Val45Ala]","LOC657040",657040,null,"657040 [Gene Symbol: LOC657040] [Locus Tag: TcasGA2_TC005820] [Chromosome: LG8] [Map Location: ] [Description: coiled-coil domain-containing protein 47] [Gene Type: protein-coding]","LOC657040; TcasGA2_TC005820"]
[1285,"NC_007423.3",7221497,"SNV","T","A","Heterozygous",16,22,72.73,1,14,8,0.36,35.94,22,28,7,8,-0.48,0.48,0.83,"no","A/T","No",1,27.95,"XP_968690.1:c.527T>A","XP_968690.1:p.Leu176His","LOC657118",657118,null,"657118 [Gene Symbol: LOC657118] [Locus Tag: TcasGA2_TC006323] [Chromosome: LG8] [Map Location: ] [Description: E3 ubiquitin-protein ligase CHIP] [Gene Type: protein-coding]","LOC657118; TcasGA2_TC006323"]
[1286,"NC_007423.3",7239418,"SNV","A","T","Homozygous",23,23,100,1,12,12,0.5,36.48,24,24,12,16,null,1,1,"no","T/T","No",1,90.73,"XP_969131.1:c.[988A>T]; XP_008196717.1:c.[988A>T]","XP_969131.1:p.[Thr330Ser]; XP_008196717.1:p.[Thr330Ser]","LOC657587",657587,null,"657587 [Gene Symbol: LOC657587] [Locus Tag: TcasGA2_TC006327] [Chromosome: LG8] [Map Location: ] [Description: DIS3-like exonuclease 2] [Gene Type: protein-coding]","LOC657587; TcasGA2_TC006327"]
[1287,"NC_007423.3",7313363,"SNV","T","A","Homozygous",30,30,100,1,17,13,0.43,36.2,30,30,14,22,null,1,1,"no","A/A","No",1,111.78,"XP_969567.1:c.895A>T","XP_969567.1:p.Thr299Ser","LOC658061",658061,null,"658061 [Gene Symbol: LOC658061] [Locus Tag: TcasGA2_TC005814] [Chromosome: LG8] [Map Location: ] [Description: 72 kDa inositol polyphosphate 5-phosphatase] [Gene Type: protein-coding]","LOC658061; TcasGA2_TC005814"]
[1288,"NC_007423.3",7316577,"SNV","C","A","Homozygous",21,21,100,1,15,12,0.44,35.48,27,27,9,13,null,1,1,"no","A/A","No",1,78.68,"XP_969645.1:c.134C>A","XP_969645.1:p.Pro45Gln","LOC658143",658143,null,"658143 [Gene Symbol: LOC658143] [Locus Tag: TcasGA2_TC006331] [Chromosome: LG8] [Map Location: ] [Description: hrp65 protein] [Gene Type: protein-coding]","TcasGA2_TC006331; LOC658143"]
[1289,"NC_007423.3",7316609,"SNV","T","C","Homozygous",20,20,100,1,5,15,0.25,37.9,20,20,9,12,null,1,1,"no","C/C","No",1,80.12,"XP_969645.1:c.166T>C","XP_969645.1:p.Ser56Pro","LOC658143",658143,null,"658143 [Gene Symbol: LOC658143] [Locus Tag: TcasGA2_TC006331] [Chromosome: LG8] [Map Location: ] [Description: hrp65 protein] [Gene Type: protein-coding]","TcasGA2_TC006331; LOC658143"]
[1290,"NC_007423.3",7384273,"SNV","C","T","Heterozygous",5,21,23.81,0.98,3,3,0.5,36.2,6,22,4,4,-0.66,0.28,1,"no","C/T","No",1,18.15,"XP_015838204.1:c.[1108G>A]; XP_015838203.1:c.[1108G>A]; XP_008196730.1:c.[1108G>A]; XP_970199.2:c.[1108G>A]","XP_015838204.1:p.[Ala370Thr]; XP_015838203.1:p.[Ala370Thr]; XP_008196730.1:p.[Ala370Thr]; XP_970199.2:p.[Ala370Thr]","LOC658744",658744,null,"658744 [Gene Symbol: LOC658744] [Locus Tag: TcasGA2_TC005811] [Chromosome: LG8] [Map Location: ] [Description: monocarboxylate transporter 12] [Gene Type: protein-coding]","LOC658744; TcasGA2_TC005811"]
[1291,"NC_007423.3",7391411,"SNV","G","C","Heterozygous",13,20,65,1,6,10,0.38,39.46,16,23,10,9,0.2,0.94,1,"no","C/G","No",1,46.14,"XP_015838205.1:c.283G>C","XP_015838205.1:p.Glu95Gln","LOC107398497",107398497,null,"107398497 [Gene Symbol: LOC107398497] [Locus Tag: TcasGA2_TC006339] [Chromosome: LG8] [Map Location: ] [Description: gastrula zinc finger protein XlCGF49.1-like] [Gene Type: protein-coding]","TcasGA2_TC006339; LOC107398497"]
[1292,"NC_007423.3",7391447,"SNV","C","A","Heterozygous",11,26,42.31,1,7,8,0.47,39,15,30,8,6,0.1,0.68,1,"no","A/C","No",1,76.93,"XP_015838205.1:c.319C>A","XP_015838205.1:p.Leu107Ile","LOC107398497",107398497,null,"107398497 [Gene Symbol: LOC107398497] [Locus Tag: TcasGA2_TC006339] [Chromosome: LG8] [Map Location: ] [Description: gastrula zinc finger protein XlCGF49.1-like] [Gene Type: protein-coding]","TcasGA2_TC006339; LOC107398497"]
[1293,"NC_007423.3",7411736,"SNV","C","A","Heterozygous",19,28,67.86,1,18,6,0.25,36.53,24,33,6,12,-1.99,0.89,0.93,"no","A/C","No",1,50.25,"XP_015838122.1:c.[542G>T]; XP_015838125.1:c.[542G>T]; XP_015838124.1:c.[542G>T]; XP_015838123.1:c.[542G>T]","XP_015838122.1:p.[Arg181Leu]; XP_015838125.1:p.[Arg181Leu]; XP_015838124.1:p.[Arg181Leu]; XP_015838123.1:p.[Arg181Leu]","LOC107398474",107398474,null,"107398474 [Gene Symbol: LOC107398474] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sialin-like] [Gene Type: protein-coding]","LOC107398474"]
[1294,"NC_007423.3",7411745,"SNV","A","G","Heterozygous",6,21,28.57,1,4,2,0.33,39.17,6,23,3,5,2.37,0.31,0.99,"no","A/G","No",1,31.72,"XP_015838123.1:c.[533T>C]; XP_015838122.1:c.[533T>C]; XP_015838125.1:c.[533T>C]; XP_015838124.1:c.[533T>C]","XP_015838123.1:p.[Val178Ala]; XP_015838122.1:p.[Val178Ala]; XP_015838125.1:p.[Val178Ala]; XP_015838124.1:p.[Val178Ala]","LOC107398474",107398474,null,"107398474 [Gene Symbol: LOC107398474] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sialin-like] [Gene Type: protein-coding]","LOC107398474"]
[1295,"NC_007423.3",7434828,"SNV","G","A","Heterozygous",6,20,30,1,3,4,0.43,39,7,22,3,5,0.41,0.71,0.86,"no","A/G","No",1,33.63,"XP_015838038.1:c.175C>T","XP_015838038.1:p.Pro59Ser","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1296,"NC_007423.3",7434831,"SNV","C","T","Heterozygous",16,22,72.73,1,12,5,0.29,37.31,17,24,12,12,0.26,0.87,0.97,"no","C/T","No",1,28.99,"XP_015838038.1:c.172G>A","XP_015838038.1:p.Gly58Ser","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1297,"NC_007423.3",7434834,"SNV","T","C","Homozygous",26,26,100,1,19,9,0.32,38,28,28,17,20,null,1,1,"no","C/C","No",1,98.17,"XP_015838038.1:c.169A>G","XP_015838038.1:p.Ser57Gly","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1298,"NC_007423.3",7434837,"SNV","C","T","Heterozygous",14,23,60.87,1,13,2,0.13,38.5,15,25,12,11,1.2,0.73,0.83,"no","C/T","No",1,64.61,"XP_015838038.1:c.166G>A","XP_015838038.1:p.Glu56Lys","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1299,"NC_007423.3",7439547,"SNV","T","C","Heterozygous",9,20,45,1,2,7,0.22,39.56,9,22,3,4,1.56,0.25,1,"no","C/T","No",1,72.94,"XP_015838039.1:c.1078A>G","XP_015838039.1:p.Ile360Val","LOC107398453",107398453,null,"107398453 [Gene Symbol: LOC107398453] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: polycystic kidney disease protein 1-like 2] [Gene Type: protein-coding]","LOC107398453"]
[1300,"NC_007423.3",7443000,"SNV","C","T","Heterozygous",13,22,59.09,1,5,9,0.36,38.08,14,23,6,8,0.43,0.95,1,"no","C/T","No",1,67.32,"XP_008196749.1:c.2785G>A","XP_008196749.1:p.Glu929Lys","LOC659665",659665,null,"659665 [Gene Symbol: LOC659665] [Locus Tag: TcasGA2_TC005802] [Chromosome: LG8] [Map Location: ] [Description: GPI inositol-deacylase] [Gene Type: protein-coding]","LOC659665; TcasGA2_TC005802"]
[1301,"NC_007423.3",7445717,"SNV","C","T","Homozygous",20,20,100,1,13,7,0.35,38.85,20,20,10,14,null,1,1,"no","T/T","No",1,81.69,"XP_008196749.1:c.499G>A","XP_008196749.1:p.Val167Ile","LOC659665",659665,null,"659665 [Gene Symbol: LOC659665] [Locus Tag: TcasGA2_TC005802] [Chromosome: LG8] [Map Location: ] [Description: GPI inositol-deacylase] [Gene Type: protein-coding]","LOC659665; TcasGA2_TC005802"]
[1302,"NC_007423.3",7458785,"SNV","A","T","Heterozygous",10,20,50,1,5,6,0.45,36.4,11,21,6,7,0.83,0.54,0.78,"no","A/T","No",1,81.53,"XP_971167.2:c.558T>A","XP_971167.2:p.Asn186Lys","LOC659802",659802,null,"659802 [Gene Symbol: LOC659802] [Locus Tag: TcasGA2_TC030778] [Chromosome: LG8] [Map Location: ] [Description: SET and MYND domain-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC030778; LOC659802"]
[1303,"NC_007423.3",7458826,"SNV","C","G","Heterozygous",10,21,47.62,1,6,7,0.46,38.6,13,25,6,5,0.53,0.46,0.7,"no","C/G","No",1,81.47,"XP_971167.2:c.517G>C","XP_971167.2:p.Asp173His","LOC659802",659802,null,"659802 [Gene Symbol: LOC659802] [Locus Tag: TcasGA2_TC030778] [Chromosome: LG8] [Map Location: ] [Description: SET and MYND domain-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC030778; LOC659802"]
[1304,"NC_007423.3",7756117,"SNV","T","G","Heterozygous",10,21,47.62,1,6,4,0.4,38.8,10,25,5,6,1.83,0.11,1,"no","G/T","No",1,81.81,"XP_008196758.1:c.1867A>C","XP_008196758.1:p.Ile623Leu","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1305,"NC_007423.3",7756138,"SNV","T","A","Homozygous",27,27,100,1,21,12,0.36,37.3,33,33,15,18,null,1,1,"no","A/A","No",1,102.75,"XP_008196758.1:c.1846A>T","XP_008196758.1:p.Met616Leu","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1306,"NC_007423.3",7756151,"SNV","G","C","Homozygous",21,21,100,1,16,10,0.38,37.76,26,26,12,16,null,1,1,"no","C/C","No",1,83.12,"XP_008196758.1:c.1833C>G","XP_008196758.1:p.Asp611Glu","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1307,"NC_007423.3",7756267,"SNV","C","G","Homozygous",23,23,100,1,14,9,0.39,37.09,23,23,12,16,null,1,1,"no","G/G","No",1,89.12,"XP_008196758.1:c.1717G>C","XP_008196758.1:p.Glu573Gln","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1308,"NC_007423.3",7843982,"SNV","G","A","Heterozygous",11,25,44,1,7,6,0.46,37.18,13,27,7,7,-0.96,0.79,0.63,"no","A/G","No",1,83.37,"XP_008196762.1:c.[7391G>A]; XP_015838156.1:c.[7130G>A]; XP_015838157.1:c.[6983G>A]; XP_008196763.1:c.[7391G>A]; XP_008196764.1:c.[7001G>A]","XP_008196762.1:p.[Ser2464Asn]; XP_015838156.1:p.[Ser2377Asn]; XP_015838157.1:p.[Ser2328Asn]; XP_008196763.1:p.[Ser2464Asn]; XP_008196764.1:p.[Ser2334Asn]","LOC661278",661278,null,"661278 [Gene Symbol: LOC661278] [Locus Tag: TcasGA2_TC006356] [Chromosome: LG8] [Map Location: ] [Description: protein split ends] [Gene Type: protein-coding]","LOC661278; TcasGA2_TC006356"]
[1309,"NC_007423.3",7891834,"SNV","C","T","Homozygous",20,20,100,1,9,14,0.39,37.65,23,23,14,16,null,1,1,"no","T/T","No",1,81.7,"XP_972851.1:c.395G>A","XP_972851.1:p.Arg132Lys","LOC661607",661607,null,"661607 [Gene Symbol: LOC661607] [Locus Tag: TcasGA2_TC005774] [Chromosome: LG8] [Map Location: ] [Description: dnaJ homolog subfamily C member 28] [Gene Type: protein-coding]","LOC661607; TcasGA2_TC005774"]
[1310,"NC_007423.3",7891856,"SNV","G","A","Heterozygous",11,20,55,1,5,8,0.38,37.45,13,22,8,10,-0.65,0.87,0.99,"no","A/G","No",1,72.81,"XP_972851.1:c.373C>T","XP_972851.1:p.Gln125*","LOC661607",661607,null,"661607 [Gene Symbol: LOC661607] [Locus Tag: TcasGA2_TC005774] [Chromosome: LG8] [Map Location: ] [Description: dnaJ homolog subfamily C member 28] [Gene Type: protein-coding]","LOC661607; TcasGA2_TC005774"]
[1311,"NC_007423.3",7896527,"SNV","C","T","Homozygous",88,104,84.62,1,56,44,0.44,38.02,100,117,49,51,null,1,1,"no","T/T","No",1,71.7,"XP_015838210.1:c.[800C>T]; XP_972897.1:c.[800C>T]","XP_015838210.1:p.[Ser267Leu]; XP_972897.1:p.[Ser267Leu]","LOC661654",661654,null,"661654 [Gene Symbol: LOC661654] [Locus Tag: TcasGA2_TC006360] [Chromosome: LG8] [Map Location: ] [Description: translocation protein SEC62] [Gene Type: protein-coding]","TcasGA2_TC006360; LOC661654"]
[1312,"NC_007423.3","7896628^7896629","Insertion","-","AGA","Homozygous",84,87,96.55,1,33,55,0.38,37.23,88,91,41,51,null,1,1,"no","AGA/AGA","No",1,200,"XP_972897.1:c.[850_851insAGA]; XP_015838210.1:c.[850_851insAGA]","XP_972897.1:p.[Lys290_Asp291insLys]; XP_015838210.1:p.[Lys290_Asp291insLys]","LOC661654",661654,null,"661654 [Gene Symbol: LOC661654] [Locus Tag: TcasGA2_TC006360] [Chromosome: LG8] [Map Location: ] [Description: translocation protein SEC62] [Gene Type: protein-coding]","TcasGA2_TC006360; LOC661654"]
[1313,"NC_007423.3",7897455,"SNV","T","C","Heterozygous",56,83,67.47,1,18,41,0.31,36.91,59,91,31,36,-2.24,0.97,1,"no","C/T","No",1,127.97,"XP_972934.1:c.343A>G","XP_972934.1:p.Thr115Ala","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1314,"NC_007423.3",7897510,"SNV","G","T","Homozygous",68,76,89.47,1,36,38,0.49,38.06,74,83,35,42,null,1,1,"no","T/T","No",1,96.43,"XP_972934.1:c.288C>A","XP_972934.1:p.Asp96Glu","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1315,"NC_007423.3","7897735..7897739","Replacement","GGGAG","TTT","Heterozygous",51,70,72.86,1,15,50,0.23,39.22,65,86,41,40,1.39,0.97,1,"no","complex","No",1,200,"XP_972934.1:c.113_117delCTCCCinsAAA","XP_972934.1:p.Thr38fs","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1316,"NC_007423.3",7899305,"SNV","G","T","Heterozygous",27,54,50,1,21,11,0.34,37.04,32,66,19,22,1.04,0.59,0.86,"no","complex","No",1,200,"XP_972934.1:c.58C>A","XP_972934.1:p.Leu20Ile","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1317,"NC_007423.3",7899341,"SNV","C","T","Heterozygous",32,76,42.11,1,22,15,0.41,38.72,37,85,17,18,0.87,0.9,0.94,"no","C/T","No",1,200,"XP_972934.1:c.22G>A","XP_972934.1:p.Asp8Asn","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1318,"NC_007423.3",7900173,"SNV","T","G","Homozygous",88,88,100,1,47,48,0.49,38.17,95,95,49,52,null,1,1,"no","G/G","No",1,200,"XP_972976.2:c.2286A>C","XP_972976.2:p.Gln762His","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1319,"NC_007423.3",7900229,"SNV","C","A","Homozygous",72,84,85.71,1,36,49,0.42,36.71,85,98,40,40,null,0.99,1,"no","A/A","No",1,67.44,"XP_972976.2:c.2230G>T","XP_972976.2:p.Asp744Tyr","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1320,"NC_007423.3",7900366,"SNV","C","G","Homozygous",74,83,89.16,1,42,43,0.49,35.91,85,94,41,41,null,0.98,1,"no","G/G","No",1,103.9,"XP_972976.2:c.2093G>C","XP_972976.2:p.Gly698Ala","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1321,"NC_007423.3",7900783,"SNV","C","T","Homozygous",90,95,94.74,1,50,54,0.48,36.98,104,110,44,54,null,1,1,"no","T/T","No",1,159.55,"XP_972976.2:c.1723G>A","XP_972976.2:p.Asp575Asn","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1322,"NC_007423.3",7901948,"SNV","G","A","Homozygous",69,79,87.34,1,40,38,0.49,35.7,78,88,40,40,null,1,1,"no","A/A","No",1,76.1,"XP_972976.2:c.1166C>T","XP_972976.2:p.Ala389Val","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1323,"NC_007423.3",7902275,"SNV","C","T","Homozygous",89,89,100,1,44,59,0.43,37.55,103,103,52,56,null,1,1,"no","T/T","No",1,200,"XP_972976.2:c.839G>A","XP_972976.2:p.Gly280Asp","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1324,"NC_007423.3",7902392,"SNV","T","C","Heterozygous",20,67,29.85,1,17,4,0.19,34.15,21,68,7,13,1.71,0.58,0.86,"no","C/T","No",1,87.81,"XP_972976.2:c.722A>G","XP_972976.2:p.Asp241Gly","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1325,"NC_007423.3",7902974,"SNV","T","C","Homozygous",71,86,82.56,1,43,35,0.45,37.21,78,95,41,45,-1.09,1,1,"no","C/C","No",1,35.92,"XP_972976.2:c.187A>G","XP_972976.2:p.Lys63Glu","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1326,"NC_007423.3",7903100,"SNV","T","C","Heterozygous",40,94,42.55,1,19,27,0.41,37.42,46,106,21,25,-0.53,1,0.98,"no","C/T","No",1,200,"XP_972976.2:c.110A>G","XP_972976.2:p.Tyr37Cys","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1327,"NC_007423.3",7935924,"SNV","A","G","Homozygous",23,23,100,1,9,14,0.39,37.48,23,23,11,20,null,1,1,"no","G/G","No",1,89.12,"XP_973165.1:c.71T>C","XP_973165.1:p.Leu24Ser","LOC662061, LOC661942","662061 , 661942",null,"662061 [Gene Symbol: LOC662061] [Locus Tag: TcasGA2_TC006364] [Chromosome: LG8] [Map Location: ] [Description: mutS protein homolog 4] [Gene Type: protein-coding] || 661942 [Gene Symbol: LOC661942] [Locus Tag: TcasGA2_TC005767] [Chromosome: LG8] [Map Location: ] [Description: ubiquitin conjugation factor E4 B] [Gene Type: protein-coding]","TcasGA2_TC006364; LOC662061 || LOC661942; TcasGA2_TC005767"]
[1328,"NC_007423.3",8108882,"SNV","C","T","Homozygous",19,21,90.48,1,10,13,0.43,36.95,23,26,11,16,null,0.98,1,"no","T/T","No",1,47.22,"XP_973544.3:c.1726G>A","XP_973544.3:p.Ala576Thr","LOC662350",662350,null,"662350 [Gene Symbol: LOC662350] [Locus Tag: TcasGA2_TC005764] [Chromosome: LG8] [Map Location: ] [Description: structural maintenance of chromosomes protein 6] [Gene Type: protein-coding]","smc6; TcasGA2_TC005764; LOC662350"]
[1329,"NC_007423.3",8196478,"SNV","A","T","Heterozygous",8,23,34.78,1,8,0,0,37.25,8,24,5,6,-0.55,0.35,0.31,"no","A/T","No",1,50.72,"XP_973829.1:c.2083A>T","XP_973829.1:p.Asn695Tyr","LOC662652",662652,null,"662652 [Gene Symbol: LOC662652] [Locus Tag: TcasGA2_TC006380] [Chromosome: LG8] [Map Location: ] [Description: mitochondrial intermediate peptidase] [Gene Type: protein-coding]","LOC662652; TcasGA2_TC006380"]
[1330,"NC_007423.3",8236335,"SNV","T","G","Homozygous",21,21,100,1,12,17,0.41,39.19,29,29,11,11,null,1,1,"no","G/G","No",1,83.1,"XP_008196804.1:c.885A>C","XP_008196804.1:p.Leu295Phe","LOC662973",662973,null,"662973 [Gene Symbol: LOC662973] [Locus Tag: TcasGA2_TC005753] [Chromosome: LG8] [Map Location: ] [Description: antichymotrypsin-2] [Gene Type: protein-coding]","LOC662973; TcasGA2_TC005753; serpin21"]
[1331,"NC_007423.3",8256309,"SNV","T","C","Heterozygous",10,27,37.04,1,6,4,0.4,37.3,10,32,7,7,-0.08,0.5,0.89,"no","C/T","No",1,66.21,"XP_015838238.1:c.950A>G","XP_015838238.1:p.Asp317Gly","LOC663160",663160,null,"663160 [Gene Symbol: LOC663160] [Locus Tag: TcasGA2_TC005744] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 12] [Gene Type: protein-coding]","serpin12; TcasGA2_TC005744; LOC663160"]
[1332,"NC_007423.3",8256345,"SNV","G","T","Heterozygous",7,27,25.93,1,2,5,0.29,37.14,7,31,4,5,-1.11,0.98,1,"no","G/T","No",1,23.35,"XP_015838238.1:c.914C>A","XP_015838238.1:p.Thr305Lys","LOC663160",663160,null,"663160 [Gene Symbol: LOC663160] [Locus Tag: TcasGA2_TC005744] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 12] [Gene Type: protein-coding]","serpin12; TcasGA2_TC005744; LOC663160"]
[1333,"NC_007423.3",8263336,"SNV","T","C","Heterozygous",8,25,32,1,8,0,0,39.12,8,25,6,6,1.28,0.13,0.08,"no","C/T","No",1,46.27,"XP_008196889.1:c.[293A>G]; XP_015838126.1:c.[293A>G]; XP_015838127.1:c.[98A>G]","XP_008196889.1:p.[His98Arg]; XP_015838126.1:p.[His98Arg]; XP_015838127.1:p.[His33Arg]","LOC103313991",103313991,null,"103313991 [Gene Symbol: LOC103313991] [Locus Tag: TcasGA2_TC005743] [Chromosome: LG8] [Map Location: ] [Description: alaserpin] [Gene Type: protein-coding]","LOC103313991; serpin11; TcasGA2_TC005743"]
[1334,"NC_007423.3",8263342,"SNV","C","T","Heterozygous",8,25,32,1,8,0,0,39.5,8,25,6,6,-0.82,0.13,0.08,"no","C/T","No",1,45,"XP_008196889.1:c.[287G>A]; XP_015838126.1:c.[287G>A]; XP_015838127.1:c.[92G>A]","XP_008196889.1:p.[Arg96Lys]; XP_015838126.1:p.[Arg96Lys]; XP_015838127.1:p.[Arg31Lys]","LOC103313991",103313991,null,"103313991 [Gene Symbol: LOC103313991] [Locus Tag: TcasGA2_TC005743] [Chromosome: LG8] [Map Location: ] [Description: alaserpin] [Gene Type: protein-coding]","LOC103313991; serpin11; TcasGA2_TC005743"]
[1335,"NC_007423.3",8263349,"SNV","C","T","Heterozygous",8,25,32,1,8,0,0,38.88,8,26,6,6,-1.14,0.09,0.07,"no","C/T","No",1,45,"XP_015838127.1:c.[85G>A]; XP_015838126.1:c.[280G>A]; XP_008196889.1:c.[280G>A]","XP_015838127.1:p.[Gly29Ser]; XP_015838126.1:p.[Gly94Ser]; XP_008196889.1:p.[Gly94Ser]","LOC103313991",103313991,null,"103313991 [Gene Symbol: LOC103313991] [Locus Tag: TcasGA2_TC005743] [Chromosome: LG8] [Map Location: ] [Description: alaserpin] [Gene Type: protein-coding]","LOC103313991; serpin11; TcasGA2_TC005743"]
[1336,"NC_007423.3",8263666,"SNV","C","T","Homozygous",27,33,81.82,0.93,18,13,0.42,37.15,31,38,11,16,0.19,0.97,1,"no","T/T","No",1,11.8,"XP_008196889.1:c.[5G>A]; XP_015838126.1:c.[5G>A]","XP_008196889.1:p.[Cys2Tyr]; XP_015838126.1:p.[Cys2Tyr]","LOC103313991",103313991,null,"103313991 [Gene Symbol: LOC103313991] [Locus Tag: TcasGA2_TC005743] [Chromosome: LG8] [Map Location: ] [Description: alaserpin] [Gene Type: protein-coding]","LOC103313991; serpin11; TcasGA2_TC005743"]
[1337,"NC_007423.3",8280246,"SNV","T","A","Heterozygous",7,20,35,1,1,6,0.14,37,7,20,4,4,-2.14,0.06,0.36,"no","A/T","No",1,46.14,"XP_008196808.1:c.[2207A>T]; XP_008196807.1:c.[2207A>T]","XP_008196808.1:p.[Asp736Val]; XP_008196807.1:p.[Asp736Val]","LOC103313954",103313954,null,"103313954 [Gene Symbol: LOC103313954] [Locus Tag: TcasGA2_TC005739] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313954; TcasGA2_TC005739"]
[1338,"NC_007423.3",8281110,"SNV","T","C","Heterozygous",11,20,55,1,8,3,0.27,38.64,11,22,6,8,-0.46,0.77,0.75,"no","C/T","No",1,71.63,"XP_008196808.1:c.[1343A>G]; XP_008196807.1:c.[1343A>G]","XP_008196808.1:p.[Glu448Gly]; XP_008196807.1:p.[Glu448Gly]","LOC103313954",103313954,null,"103313954 [Gene Symbol: LOC103313954] [Locus Tag: TcasGA2_TC005739] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313954; TcasGA2_TC005739"]
[1339,"NC_007423.3",8352306,"SNV","G","C","Homozygous",23,23,100,1,6,18,0.25,38.17,24,24,11,15,null,1,1,"no","C/C","No",1,86.13,"XP_015838044.1:c.3989C>G","XP_015838044.1:p.Ser1330Cys","LOC103313993",103313993,null,"103313993 [Gene Symbol: LOC103313993] [Locus Tag: TcasGA2_TC005735] [Chromosome: LG8] [Map Location: ] [Description: sperm flagellar protein 2] [Gene Type: protein-coding]","TcasGA2_TC005735; LOC103313993"]
[1340,"NC_007423.3",8372891,"SNV","G","C","Homozygous",22,22,100,1,12,11,0.48,37.05,23,23,12,13,null,1,1,"no","C/C","No",1,86.13,"XP_008196742.1:c.[313G>C]; NP_001103249.1:c.[313G>C]","XP_008196742.1:p.[Ala105Pro]; NP_001103249.1:p.[Ala105Pro]","Tcas_6927",663445,"cys-loop ligand-gated ion channel subunit","663445 [Gene Symbol: Tcas_6927] [Locus Tag: TcasGA2_TC006392] [Chromosome: LG8] [Map Location: ] [Description: cys-loop ligand-gated ion channel subunit] [Gene Type: protein-coding]","TcasGA2_TC006392; Tcas_6927"]
[1341,"NC_007423.3",8450544,"SNV","A","G","Homozygous",20,20,100,1,9,11,0.45,39.2,20,20,10,16,null,1,1,"no","G/G","No",1,80.09,"XP_015838227.1:c.[532A>G]; XP_008196893.1:c.[574A>G]","XP_015838227.1:p.[Ile178Val]; XP_008196893.1:p.[Ile192Val]","LOC103313995",103313995,null,"103313995 [Gene Symbol: LOC103313995] [Locus Tag: TcasGA2_TC006401] [Chromosome: LG8] [Map Location: ] [Description: mast cell carboxypeptidase A] [Gene Type: protein-coding]","TcasGA2_TC006401; LOC103313995"]
[1342,"NC_007423.3",8482572,"SNV","G","T","Homozygous",18,20,90,0.98,4,16,0.2,35.61,20,23,11,12,null,0.98,1,"no","T/T","No",1,18.2,"XP_008196839.1:c.[165G>T]; XP_008196841.1:c.[124-4G>T]","XP_008196839.1:p.Leu55Phe","LOC103313973",103313973,null,"103313973 [Gene Symbol: LOC103313973] [Locus Tag: TcasGA2_TC006407] [Chromosome: LG8] [Map Location: ] [Description: oocyte zinc finger protein XlCOF15] [Gene Type: protein-coding]","TcasGA2_TC006407; LOC103313973"]
[1343,"NC_007423.3",8510772,"SNV","A","G","Homozygous",20,20,100,1,7,13,0.35,37.75,20,20,10,15,null,1,1,"no","G/G","No",1,80.09,"XP_008196845.1:c.1327A>G","XP_008196845.1:p.Thr443Ala","LOC100141581",100141581,null,"100141581 [Gene Symbol: LOC100141581] [Locus Tag: TcasGA2_TC006412] [Chromosome: LG8] [Map Location: ] [Description: thioredoxin domain-containing protein 11] [Gene Type: protein-coding]","TcasGA2_TC006412; LOC100141581"]
[1344,"NC_007423.3",8527126,"SNV","G","A","Homozygous",20,20,100,1,14,6,0.3,37.6,20,20,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_975071.2:c.1394G>A","XP_975071.2:p.Arg465Lys","LOC663951",663951,null,"663951 [Gene Symbol: LOC663951] [Locus Tag: TcasGA2_TC006413] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC663951; TcasGA2_TC006413"]
[1345,"NC_007423.3",8893495,"SNV","G","T","Homozygous",22,22,100,1,10,12,0.45,36.82,22,22,10,18,null,1,1,"no","T/T","No",1,87.71,"XP_008196861.1:c.1820C>A","XP_008196861.1:p.Pro607Gln","LOC664152",664152,null,"664152 [Gene Symbol: LOC664152] [Locus Tag: TcasGA2_TC005697] [Chromosome: LG8] [Map Location: ] [Description: ATP-dependent RNA helicase DHX36] [Gene Type: protein-coding]","LOC664152; DHX36; TcasGA2_TC005697"]
[1346,"NC_007423.3",9006164,"SNV","T","G","Homozygous",25,25,100,1,13,12,0.48,38.16,25,25,15,15,null,1,1,"no","G/G","No",1,95.14,"XP_015838240.1:c.[727T>G]; XP_001815657.1:c.[577T>G]; XP_015838241.1:c.[502T>G]","XP_015838240.1:p.[Trp243Gly]; XP_001815657.1:p.[Trp193Gly]; XP_015838241.1:p.[Trp168Gly]","LOC100142139",100142139,null,"100142139 [Gene Symbol: LOC100142139] [Locus Tag: TcasGA2_TC006423] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142139] [Gene Type: protein-coding]","LOC100142139; TcasGA2_TC006423"]
[1347,"NC_007423.3",9006347,"SNV","G","C","Homozygous",19,20,95,1,5,18,0.22,35.74,23,24,9,10,null,0.99,1,"no","C/C","No",1,48.95,"XP_015838240.1:c.[852G>C]; XP_015838241.1:c.[627G>C]; XP_001815657.1:c.[702G>C]","XP_015838240.1:p.[Glu284Asp]; XP_015838241.1:p.[Glu209Asp]; XP_001815657.1:p.[Glu234Asp]","LOC100142139",100142139,null,"100142139 [Gene Symbol: LOC100142139] [Locus Tag: TcasGA2_TC006423] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142139] [Gene Type: protein-coding]","LOC100142139; TcasGA2_TC006423"]
[1348,"NC_007423.3",9006357,"SNV","A","G","Homozygous",22,22,100,1,5,20,0.2,37.73,25,25,10,12,null,1,1,"no","G/G","No",1,86.11,"XP_015838241.1:c.[637A>G]; XP_015838240.1:c.[862A>G]; XP_001815657.1:c.[712A>G]","XP_015838241.1:p.[Thr213Ala]; XP_015838240.1:p.[Thr288Ala]; XP_001815657.1:p.[Thr238Ala]","LOC100142139",100142139,null,"100142139 [Gene Symbol: LOC100142139] [Locus Tag: TcasGA2_TC006423] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142139] [Gene Type: protein-coding]","LOC100142139; TcasGA2_TC006423"]
[1349,"NC_007423.3",9315350,"SNV","C","A","Homozygous",20,20,100,1,9,11,0.45,39.95,20,20,13,16,null,1,1,"no","A/A","No",1,81.69,"XP_015838172.1:c.121G>T","XP_015838172.1:p.Ala41Ser","LOC107398488",107398488,null,"107398488 [Gene Symbol: LOC107398488] [Locus Tag: TcasGA2_TC034084] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398488] [Gene Type: protein-coding]","LOC107398488; TcasGA2_TC034084"]
[1350,"NC_007423.3",9320740,"SNV","A","T","Homozygous",25,25,100,1,11,14,0.44,38,25,25,18,17,null,1,1,"no","T/T","No",1,96.74,"XP_015838174.1:c.[421-314T>A]; XP_015838171.1:c.[254A>T]","XP_015838171.1:p.Asn85Ile","LOC664273, LOC107398487","664273 , 107398487",null,"664273 [Gene Symbol: LOC664273] [Locus Tag: TcasGA2_TC031280] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC664273] [Gene Type: protein-coding] || 107398487 [Gene Symbol: LOC107398487] [Locus Tag: TcasGA2_TC006440] [Chromosome: LG8] [Map Location: ] [Description: P-granule-associated novel protein 1-like] [Gene Type: protein-coding]","TcasGA2_TC031280; LOC664273 || TcasGA2_TC006440; LOC107398487"]
[1351,"NC_007423.3",9326858,"SNV","A","G","Homozygous",20,20,100,1,10,12,0.45,37.6,22,22,14,16,null,1,1,"no","G/G","No",1,77.08,"XP_975385.1:c.1094A>G","XP_975385.1:p.Asp365Gly","LOC664285",664285,null,"664285 [Gene Symbol: LOC664285] [Locus Tag: TcasGA2_TC006442] [Chromosome: LG8] [Map Location: ] [Description: cytochrome P450-like protein] [Gene Type: protein-coding]","LOC664285; TcasGA2_TC006442"]
[1352,"NC_007423.3","9372061..9372062","MNV","CT","GC","Homozygous",27,27,100,1,14,13,0.48,35.46,27,27,12,16,null,1,1,"no","GC/GC","No",1,200,"XP_015838168.1:c.[864_865delCTinsGC]; XP_008194602.1:c.[885_886delCTinsGC]; XP_008194603.1:c.[864_865delCTinsGC]; XP_008194604.1:c.[729_730delCTinsGC]","XP_015838168.1:p.[Ser289Pro]; XP_008194602.1:p.[Ser296Pro]; XP_008194603.1:p.[Ser289Pro]; XP_008194604.1:p.[Ser244Pro]","LOC660719",660719,null,"660719 [Gene Symbol: LOC660719] [Locus Tag: TcasGA2_TC015234] [Chromosome: LG8] [Map Location: ] [Description: chorion peroxidase] [Gene Type: protein-coding]","LOC660719; TcasGA2_TC015234"]
[1353,"NC_007423.3",9373085,"SNV","T","C","Homozygous",20,20,100,1,19,4,0.17,38.8,23,23,11,13,null,1,1,"no","C/C","No",1,80.12,"XP_008194603.1:c.[1838T>C]; XP_008194602.1:c.[1859T>C]; XP_015838168.1:c.[1838T>C]; XP_008194604.1:c.[1703T>C]","XP_008194603.1:p.[Met613Thr]; XP_008194602.1:p.[Met620Thr]; XP_015838168.1:p.[Met613Thr]; XP_008194604.1:p.[Met568Thr]","LOC660719",660719,null,"660719 [Gene Symbol: LOC660719] [Locus Tag: TcasGA2_TC015234] [Chromosome: LG8] [Map Location: ] [Description: chorion peroxidase] [Gene Type: protein-coding]","LOC660719; TcasGA2_TC015234"]
[1354,"NC_007423.3",9381422,"SNV","C","G","Homozygous",29,29,100,1,11,21,0.34,36.48,32,32,13,19,null,1,1,"no","G/G","No",1,107.17,"XP_015838169.1:c.535C>G","XP_015838169.1:p.Leu179Val","LOC107398485",107398485,null,"107398485 [Gene Symbol: LOC107398485] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter-like] [Gene Type: protein-coding]","LOC107398485"]
[1355,"NC_007423.3","9382298..9382299","MNV","GC","AT","Homozygous",20,20,100,1,3,17,0.15,38,20,20,10,10,null,1,1,"no","AT/AT","No",1,200,"XP_015838169.1:c.832_833delGCinsAT","XP_015838169.1:p.Ala278Ile","LOC107398485",107398485,null,"107398485 [Gene Symbol: LOC107398485] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter-like] [Gene Type: protein-coding]","LOC107398485"]
[1356,"NC_007423.3",9395340,"SNV","G","T","Homozygous",24,24,100,1,15,12,0.44,38.46,27,27,11,17,null,1,1,"no","T/T","No",1,93.73,"XP_015838297.1:c.[574G>T]; XP_971806.1:c.[562G>T]","XP_015838297.1:p.[Val192Leu]; XP_971806.1:p.[Val188Leu]","LOC660485",660485,null,"660485 [Gene Symbol: LOC660485] [Locus Tag: TcasGA2_TC015238] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660485] [Gene Type: protein-coding]","LOC660485; TcasGA2_TC015238"]
[1357,"NC_007423.3",9446734,"SNV","C","T","Homozygous",23,23,100,1,16,16,0.5,36.7,32,32,16,14,null,1,1,"no","T/T","No",1,90.73,"XP_015838046.1:c.914C>T","XP_015838046.1:p.Ser305Phe","LOC659859",659859,null,"659859 [Gene Symbol: LOC659859] [Locus Tag: TcasGA2_TC015245] [Chromosome: LG8] [Map Location: ] [Description: hornerin] [Gene Type: protein-coding]","TcasGA2_TC015245; LOC659859"]
[1358,"NC_007423.3","9452706..9452707","MNV","GA","AG","Heterozygous",14,27,51.85,1,14,9,0.39,38.93,23,38,11,16,2.89,0.58,1,"no","complex","No",1,200,"XP_015838046.1:c.3179_3180delGAinsAG","XP_015838046.1:p.Arg1060Gln","LOC659859",659859,null,"659859 [Gene Symbol: LOC659859] [Locus Tag: TcasGA2_TC015245] [Chromosome: LG8] [Map Location: ] [Description: hornerin] [Gene Type: protein-coding]","TcasGA2_TC015245; LOC659859"]
[1359,"NC_007423.3",9452723,"SNV","T","C","Heterozygous",5,21,23.81,0.99,2,3,0.4,38.4,5,27,4,4,-0.08,0.88,0.89,"no","C/T","No",1,19.21,"XP_015838046.1:c.3196T>C","XP_015838046.1:p.Tyr1066His","LOC659859",659859,null,"659859 [Gene Symbol: LOC659859] [Locus Tag: TcasGA2_TC015245] [Chromosome: LG8] [Map Location: ] [Description: hornerin] [Gene Type: protein-coding]","TcasGA2_TC015245; LOC659859"]
[1360,"NC_007423.3",9469605,"SNV","T","C","Homozygous",20,20,100,1,14,11,0.44,37.6,25,25,12,16,null,1,1,"no","C/C","No",1,80.11,"XP_970733.3:c.1237A>G","XP_970733.3:p.Ser413Gly","LOC659323",659323,null,"659323 [Gene Symbol: LOC659323] [Locus Tag: TcasGA2_TC015473] [Chromosome: LG8] [Map Location: ] [Description: zinc finger protein SNAI1] [Gene Type: protein-coding]","TcasGA2_TC015473; LOC659323"]
[1361,"NC_007423.3",9481723,"SNV","C","A","Heterozygous",5,21,23.81,0.96,0,5,0,40.4,5,22,3,2,2.39,0.02,0.13,"no","A/C","No",1,14.45,"XP_970521.1:c.208G>T","XP_970521.1:p.Asp70Tyr","LOC659096",659096,null,"659096 [Gene Symbol: LOC659096] [Locus Tag: TcasGA2_TC015471] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC659096] [Gene Type: protein-coding]","LOC659096; TcasGA2_TC015471"]
[1362,"NC_007423.3",9490395,"SNV","C","G","Heterozygous",8,29,27.59,1,5,6,0.45,40.38,11,37,6,5,1.98,0.67,1,"no","C/G","No",1,33.86,"XP_015838048.1:c.3995G>C","XP_015838048.1:p.Gly1332Ala","LOC658801",658801,null,"658801 [Gene Symbol: LOC658801] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: inverted formin-2-like] [Gene Type: protein-coding]","LOC658801"]
[1363,"NC_007423.3",9509978,"SNV","C","A","Heterozygous",7,21,33.33,1,4,5,0.44,38.86,9,25,5,5,1.72,0.67,1,"no","A/C","No",1,39.83,"XP_008194583.2:c.[259+1531C>A]; XP_008194584.2:c.[259+1531C>A]; XP_015838134.1:c.[114C>A]","XP_015838134.1:p.Phe38Leu","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1364,"NC_007423.3",9510184,"SNV","A","C","Heterozygous",9,21,42.86,1,8,5,0.38,38.89,13,25,7,7,0.96,0.46,0.76,"no","A/C","No",1,69.75,"XP_008194583.2:c.[259+1737A>C]; XP_015838134.1:c.[320A>C]; XP_008194584.2:c.[259+1737A>C]","XP_015838134.1:p.Glu107Ala","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1365,"NC_007423.3",9557620,"SNV","T","G","Homozygous",15,20,75,0.74,8,12,0.4,38.73,20,25,11,13,null,0.93,0.89,"no","C/G","No",1,5.81,"XP_008194610.1:c.675T>G","XP_008194610.1:p.Asp225Glu","LOC103313354",103313354,null,"103313354 [Gene Symbol: LOC103313354] [Locus Tag: TcasGA2_TC015258] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: von Willebrand factor D and EGF domain-containing protein] [Gene Type: protein-coding]","LOC103313354; TcasGA2_TC015258; NimCl2"]
[1366,"NC_007423.3",9643788,"SNV","T","C","Heterozygous",6,24,25,1,5,3,0.38,38.17,8,33,4,5,-0.7,0.26,0.94,"no","C/T","No",1,23.58,"XP_008194571.2:c.[1948A>G]; XP_008194572.2:c.[1948A>G]","XP_008194571.2:p.[Ile650Val]; XP_008194572.2:p.[Ile650Val]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1367,"NC_007423.3",9643815,"SNV","T","C","Heterozygous",7,28,25,1,6,4,0.4,39,10,34,5,6,0.34,0.85,1,"no","C/T","No",1,25.19,"XP_008194571.2:c.[1921A>G]; XP_008194572.2:c.[1921A>G]","XP_008194571.2:p.[Ile641Val]; XP_008194572.2:p.[Ile641Val]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1368,"NC_007423.3",9643821,"SNV","C","T","Heterozygous",7,29,24.14,0.99,6,4,0.4,37.86,10,35,5,6,-1.17,0.52,1,"no","C/T","No",1,21.11,"XP_008194572.2:c.[1915G>A]; XP_008194571.2:c.[1915G>A]","XP_008194572.2:p.[Val639Ile]; XP_008194571.2:p.[Val639Ile]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1369,"NC_007423.3",9644491,"SNV","G","T","Heterozygous",6,22,27.27,1,2,4,0.33,37.67,6,24,4,4,-1.18,0.55,0.67,"no","G/T","No",1,24.47,"XP_008194572.2:c.[1245C>A]; XP_008194571.2:c.[1245C>A]","XP_008194572.2:p.[Phe415Leu]; XP_008194571.2:p.[Phe415Leu]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1370,"NC_007423.3",9644523,"SNV","C","T","Heterozygous",7,29,24.14,0.99,2,5,0.29,38.71,7,34,3,5,0.18,0.57,0.71,"no","C/T","No",1,21.09,"XP_008194572.2:c.[1213G>A]; XP_008194571.2:c.[1213G>A]","XP_008194572.2:p.[Glu405Lys]; XP_008194571.2:p.[Glu405Lys]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1371,"NC_007423.3",9644526,"SNV","T","C","Heterozygous",7,27,25.93,1,2,5,0.29,38.57,7,33,3,5,-0.66,0.61,0.83,"no","C/T","No",1,27.98,"XP_008194572.2:c.[1210A>G]; XP_008194571.2:c.[1210A>G]","XP_008194572.2:p.[Arg404Gly]; XP_008194571.2:p.[Arg404Gly]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1372,"NC_007423.3",9644628,"SNV","G","A","Heterozygous",9,31,29.03,1,6,3,0.33,38.78,9,35,6,6,3.16,0.13,0.9,"no","A/G","No",1,41.14,"XP_008194571.2:c.[1108C>T]; XP_008194572.2:c.[1108C>T]","XP_008194571.2:p.[Arg370*]; XP_008194572.2:p.[Arg370*]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1373,"NC_007423.3",9644666,"SNV","C","G","Heterozygous",5,23,21.74,0.94,4,5,0.44,38.6,9,27,3,3,0.86,0.43,0.98,"no","C/G","No",1,12.5,"XP_008194572.2:c.[1070G>C]; XP_008194571.2:c.[1070G>C]","XP_008194572.2:p.[Gly357Ala]; XP_008194571.2:p.[Gly357Ala]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1374,"NC_007423.3",9644759,"SNV","G","A","Heterozygous",6,21,28.57,1,0,6,0,39.5,6,23,3,3,0.16,0.02,0.05,"no","A/G","No",1,30.82,"XP_008194572.2:c.[977C>T]; XP_008194571.2:c.[977C>T]","XP_008194572.2:p.[Ala326Val]; XP_008194571.2:p.[Ala326Val]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1375,"NC_007423.3",9644761,"SNV","T","A","Heterozygous",6,21,28.57,1,0,6,0,38.83,6,23,3,3,-0.12,0.02,0.05,"no","A/T","No",1,30.59,"XP_008194571.2:c.[975A>T]; XP_008194572.2:c.[975A>T]","XP_008194571.2:p.[Glu325Asp]; XP_008194572.2:p.[Glu325Asp]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1376,"NC_007423.3",9644763,"SNV","C","T","Heterozygous",6,21,28.57,1,0,6,0,37.33,6,23,3,3,-0.97,0.02,0.05,"no","C/T","No",1,30.66,"XP_008194572.2:c.[973G>A]; XP_008194571.2:c.[973G>A]","XP_008194572.2:p.[Glu325Lys]; XP_008194571.2:p.[Glu325Lys]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1377,"NC_007423.3",9644787,"SNV","T","C","Heterozygous",7,22,31.82,1,1,6,0.14,39.14,7,23,4,4,-0.35,0.1,0.15,"no","C/T","No",1,41.9,"XP_008194572.2:c.[949A>G]; XP_008194571.2:c.[949A>G]","XP_008194572.2:p.[Lys317Glu]; XP_008194571.2:p.[Lys317Glu]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1378,"NC_007423.3",9644802,"SNV","G","T","Heterozygous",7,21,33.33,1,0,7,0,38.43,7,25,3,4,-0.04,0.02,0.11,"no","G/T","No",1,40.03,"XP_008194571.2:c.[934C>A]; XP_008194572.2:c.[934C>A]","XP_008194571.2:p.[Gln312Lys]; XP_008194572.2:p.[Gln312Lys]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1379,"NC_007423.3",9644921,"SNV","T","G","Heterozygous",5,20,25,0.99,0,5,0,37.6,5,21,3,3,0.48,0.08,0.73,"no","G/T","No",1,21.3,"XP_008194572.2:c.[815A>C]; XP_008194571.2:c.[815A>C]","XP_008194572.2:p.[Asp272Ala]; XP_008194571.2:p.[Asp272Ala]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1380,"NC_007423.3",9644951,"SNV","T","C","Heterozygous",6,22,27.27,1,5,2,0.29,38.5,7,25,5,4,-0.26,0.13,0.25,"no","C/T","No",1,29.14,"XP_008194572.2:c.[785A>G]; XP_008194571.2:c.[785A>G]","XP_008194572.2:p.[Asp262Gly]; XP_008194571.2:p.[Asp262Gly]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1381,"NC_007423.3",9644961,"SNV","T","G","Heterozygous",7,21,33.33,1,6,2,0.25,40,8,24,6,4,0.22,0.17,0.28,"no","G/T","No",1,44.04,"XP_008194572.2:c.[775A>C]; XP_008194571.2:c.[775A>C]","XP_008194572.2:p.[Lys259Gln]; XP_008194571.2:p.[Lys259Gln]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1382,"NC_007423.3","9669372..9669373","MNV","AT","GC","Homozygous",24,24,100,1,11,19,0.37,38.98,30,30,15,20,null,1,1,"no","GC/GC","No",1,200,"XP_001808223.1:c.235_236delATinsGC","XP_001808223.1:p.Ile79Ala","LOC100142248",100142248,null,"100142248 [Gene Symbol: LOC100142248] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: macrophage migration inhibitory factor homolog] [Gene Type: protein-coding]","LOC100142248"]
[1383,"NC_007423.3",9690828,"SNV","A","G","Homozygous",22,22,100,1,13,13,0.5,36.77,26,26,14,14,null,1,1,"no","G/G","No",1,86.11,"XP_008194606.1:c.3773T>C","XP_008194606.1:p.Phe1258Ser","LOC103313351",103313351,null,"103313351 [Gene Symbol: LOC103313351] [Locus Tag: TcasGA2_TC015446] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313351; TcasGA2_TC015446"]
[1384,"NC_007423.3",9691213,"SNV","G","A","Heterozygous",5,24,20.83,0.9,3,4,0.43,37.6,7,28,3,3,-0.75,0.78,1,"no","A/G","No",1,10.18,"XP_008194606.1:c.3388C>T","XP_008194606.1:p.Leu1130Phe","LOC103313351",103313351,null,"103313351 [Gene Symbol: LOC103313351] [Locus Tag: TcasGA2_TC015446] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313351; TcasGA2_TC015446"]
[1385,"NC_007423.3",9751343,"SNV","T","A","Heterozygous",15,22,68.18,1,5,10,0.33,38.8,15,22,8,9,-0.04,0.95,1,"no","A/T","No",1,40.72,"XP_015838052.1:c.35A>T","XP_015838052.1:p.Gln12Leu","LOC107398460",107398460,null,"107398460 [Gene Symbol: LOC107398460] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: odorant receptor 49b-like] [Gene Type: protein-coding]","or17; LOC107398460"]
[1386,"NC_007423.3",9751345,"SNV","G","T","Heterozygous",15,22,68.18,1,5,10,0.33,38.67,15,22,8,9,0.56,1,1,"no","G/T","No",1,41.23,"XP_015838052.1:c.33C>A","XP_015838052.1:p.Ser11Arg","LOC107398460",107398460,null,"107398460 [Gene Symbol: LOC107398460] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: odorant receptor 49b-like] [Gene Type: protein-coding]","or17; LOC107398460"]
[1387,"NC_007423.3",9878887,"SNV","T","G","Homozygous",20,20,100,1,16,7,0.3,38.25,23,23,10,16,null,1,1,"no","G/G","No",1,80.09,"XP_015838087.1:c.[2010T>G]; XP_015838088.1:c.[2010T>G]","XP_015838087.1:p.[Ser670Arg]; XP_015838088.1:p.[Ser670Arg]","LOC103314047, LOC656452","103314047 , 656452",null,"103314047 [Gene Symbol: LOC103314047] [Locus Tag: TcasGA2_TC005670] [Chromosome: LG8] [Map Location: ] [Description: epidermal growth factor-like protein 8] [Gene Type: protein-coding] || 656452 [Gene Symbol: LOC656452] [Locus Tag: TcasGA2_TC006453] [Chromosome: LG8] [Map Location: ] [Description: lysosomal alpha-mannosidase] [Gene Type: protein-coding]","TcasGA2_TC005670; LOC103314047 || LOC656452; TcasGA2_TC006453"]
[1388,"NC_007423.3",9901278,"SNV","A","G","Heterozygous",11,20,55,1,6,6,0.5,38.82,12,21,5,5,1.82,0.74,1,"no","A/G","No",1,71.78,"NP_001153727.1:c.458A>G","NP_001153727.1:p.Lys153Arg","LOC103314047, LOC656698","103314047 , 656698","lysosomal alpha-mannosidase-like","103314047 [Gene Symbol: LOC103314047] [Locus Tag: TcasGA2_TC005670] [Chromosome: LG8] [Map Location: ] [Description: epidermal growth factor-like protein 8] [Gene Type: protein-coding] || 656698 [Gene Symbol: LOC656698] [Locus Tag: TcasGA2_TC006456] [Chromosome: LG8] [Map Location: ] [Description: lysosomal alpha-mannosidase-like] [Gene Type: protein-coding]","TcasGA2_TC005670; LOC103314047 || TcasGA2_TC006456; LOC656698"]
[1389,"NC_007423.3",9977728,"SNV","C","T","Heterozygous",11,26,42.31,1,2,9,0.18,38.27,11,27,6,7,0.03,0.39,0.45,"no","C/T","No",1,80.43,"XP_008197059.1:c.239C>T","XP_008197059.1:p.Thr80Ile","LOC657430",657430,null,"657430 [Gene Symbol: LOC657430] [Locus Tag: TcasGA2_TC006462] [Chromosome: LG8] [Map Location: ] [Description: exosome complex exonuclease RRP6] [Gene Type: protein-coding]","TcasGA2_TC006462; LOC657430"]
[1390,"NC_007423.3",9977947,"SNV","T","G","Heterozygous",8,22,36.36,1,4,4,0.5,40.5,8,22,4,5,1.4,0.4,0.64,"no","G/T","No",1,54.02,"XP_008197059.1:c.458T>G","XP_008197059.1:p.Val153Gly","LOC657430",657430,null,"657430 [Gene Symbol: LOC657430] [Locus Tag: TcasGA2_TC006462] [Chromosome: LG8] [Map Location: ] [Description: exosome complex exonuclease RRP6] [Gene Type: protein-coding]","TcasGA2_TC006462; LOC657430"]
[1391,"NC_007423.3",9980763,"SNV","C","A","Heterozygous",12,34,35.29,1,9,3,0.25,37.25,12,39,5,10,-1.19,0.34,0.95,"no","A/C","No",1,67.4,"NP_001153709.1:c.913G>T","NP_001153709.1:p.Asp305Tyr","Eif-3p66",657510,"eukaryotic initiation factor 3 p66 subunit","657510 [Gene Symbol: Eif-3p66] [Locus Tag: TcasGA2_TC005665] [Chromosome: LG8] [Map Location: ] [Description: eukaryotic initiation factor 3 p66 subunit] [Gene Type: protein-coding]","Eif-3p66; TcasGA2_TC005665"]
[1392,"NC_007423.3",10083377,"SNV","C","A","Homozygous",20,20,100,1,13,10,0.43,38,23,23,11,16,null,1,1,"no","A/A","No",1,81.69,"XP_008197063.1:c.1603C>A","XP_008197063.1:p.His535Asn","LOC658144",658144,null,"658144 [Gene Symbol: LOC658144] [Locus Tag: TcasGA2_TC006465] [Chromosome: LG8] [Map Location: ] [Description: myosin 15] [Gene Type: protein-coding]","LOC658144; Myo15; TcasGA2_TC006465"]
[1393,"NC_007423.3",10086299,"SNV","G","A","Homozygous",20,20,100,1,7,15,0.32,38.7,22,22,12,15,null,1,1,"no","A/A","No",1,81.69,"XP_008197063.1:c.4309G>A","XP_008197063.1:p.Asp1437Asn","LOC658144",658144,null,"658144 [Gene Symbol: LOC658144] [Locus Tag: TcasGA2_TC006465] [Chromosome: LG8] [Map Location: ] [Description: myosin 15] [Gene Type: protein-coding]","LOC658144; Myo15; TcasGA2_TC006465"]
[1394,"NC_007423.3",10101219,"SNV","T","C","Homozygous",27,27,100,1,23,7,0.23,38,30,30,13,17,null,1,1,"no","C/C","No",1,101.18,"XP_976275.1:c.[589A>G]; XP_015838296.1:c.[589A>G]","XP_976275.1:p.[Thr197Ala]; XP_015838296.1:p.[Thr197Ala]","LOC658222",658222,null,"658222 [Gene Symbol: LOC658222] [Locus Tag: TcasGA2_TC005658] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC658222] [Gene Type: protein-coding]","LOC658222; TcasGA2_TC005658"]
[1395,"NC_007423.3",10110625,"SNV","C","G","Homozygous",28,28,100,1,19,12,0.39,36.57,31,31,12,18,null,1,1,"no","G/G","No",1,104.16,"XP_015838225.1:c.[2191G>C]; XP_969793.1:c.[156+2213C>G]","XP_015838225.1:p.Ala731Pro","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1396,"NC_007423.3",10110643,"SNV","A","G","Homozygous",33,33,100,1,17,19,0.47,35.12,36,36,13,17,null,1,1,"no","G/G","No",1,119.21,"XP_015838225.1:c.[2173T>C]; XP_969793.1:c.[156+2231A>G]","XP_015838225.1:p.Cys725Arg","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1397,"NC_007423.3",10110765,"SNV","G","C","Homozygous",22,22,100,1,5,17,0.23,38.41,22,22,9,16,null,1,1,"no","C/C","No",1,86.14,"XP_015838225.1:c.[2051C>G]; XP_969793.1:c.[156+2353G>C]","XP_015838225.1:p.Pro684Arg","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1398,"NC_007423.3",10110796,"SNV","T","A","Homozygous",21,21,100,1,8,14,0.36,37.38,22,22,9,13,null,1,1,"no","A/A","No",1,81.69,"XP_969793.1:c.[156+2384T>A]; XP_015838225.1:c.[2020A>T]","XP_015838225.1:p.Thr674Ser","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1399,"NC_007423.3",10112734,"SNV","T","C","Homozygous",20,20,100,1,8,17,0.32,36.55,25,25,14,15,null,1,1,"no","C/C","No",1,80.12,"XP_015838225.1:c.[130A>G]; XP_969793.1:c.[156+4322T>C]","XP_015838225.1:p.Ile44Val","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1400,"NC_007423.3",10125287,"SNV","T","A","Homozygous",25,25,100,1,12,15,0.44,38,27,27,15,18,null,1,1,"no","A/A","No",1,96.73,"XP_015838222.1:c.[4869A>T]; XP_008197064.1:c.[4869A>T]; XP_015838223.1:c.[4626A>T]","XP_015838222.1:p.[Lys1623Asn]; XP_008197064.1:p.[Lys1623Asn]; XP_015838223.1:p.[Lys1542Asn]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1401,"NC_007423.3",10125303,"SNV","C","T","Homozygous",34,34,100,1,16,24,0.4,37.29,40,40,20,22,null,1,1,"no","T/T","No",1,123.81,"XP_015838222.1:c.[4853G>A]; XP_015838223.1:c.[4610G>A]; XP_008197064.1:c.[4853G>A]","XP_015838222.1:p.[Ser1618Asn]; XP_015838223.1:p.[Ser1537Asn]; XP_008197064.1:p.[Ser1618Asn]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1402,"NC_007423.3","10125421..10125422","MNV","TA","CT","Homozygous",22,22,100,1,12,13,0.48,37.07,25,25,10,17,null,1,1,"no","CT/CT","No",1,200,"XP_015838222.1:c.[4734_4735delTAinsAG]; XP_008197064.1:c.[4734_4735delTAinsAG]; XP_015838223.1:c.[4491_4492delTAinsAG]","XP_015838222.1:p.[Ile1579Val]; XP_008197064.1:p.[Ile1579Val]; XP_015838223.1:p.[Ile1498Val]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1403,"NC_007423.3",10126482,"SNV","C","T","Homozygous",20,20,100,1,17,5,0.23,38.55,22,22,12,14,null,1,1,"no","T/T","No",1,81.69,"XP_015838223.1:c.[3431G>A]; XP_008197064.1:c.[3674G>A]; XP_015838222.1:c.[3674G>A]","XP_015838223.1:p.[Ser1144Asn]; XP_008197064.1:p.[Ser1225Asn]; XP_015838222.1:p.[Ser1225Asn]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1404,"NC_007423.3",10126494,"SNV","T","C","Homozygous",20,20,100,1,17,5,0.23,37.45,22,22,12,15,null,1,1,"no","C/C","No",1,80.12,"XP_015838222.1:c.[3662A>G]; XP_008197064.1:c.[3662A>G]; XP_015838223.1:c.[3419A>G]","XP_015838222.1:p.[Gln1221Arg]; XP_008197064.1:p.[Gln1221Arg]; XP_015838223.1:p.[Gln1140Arg]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1405,"NC_007423.3",10126922,"SNV","G","T","Homozygous",23,23,100,1,11,14,0.44,39.43,25,25,10,17,null,1,1,"no","T/T","No",1,90.72,"XP_008197064.1:c.[3234C>A]; XP_015838222.1:c.[3234C>A]; XP_015838223.1:c.[2991C>A]","XP_008197064.1:p.[His1078Gln]; XP_015838222.1:p.[His1078Gln]; XP_015838223.1:p.[His997Gln]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1406,"NC_007423.3",10128355,"SNV","T","C","Homozygous",22,22,100,1,12,12,0.5,38.41,24,24,15,15,null,1,1,"no","C/C","No",1,86.14,"XP_015838222.1:c.[1801A>G]; XP_008197064.1:c.[1801A>G]; XP_015838223.1:c.[1735+66A>G]","XP_015838222.1:p.[Lys601Glu]; XP_008197064.1:p.[Lys601Glu]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1407,"NC_007423.3",10149879,"SNV","G","A","Homozygous",22,22,100,1,11,11,0.5,38.27,22,22,13,15,null,1,1,"no","A/A","No",1,87.7,"XP_015838053.1:c.2560G>A","XP_015838053.1:p.Ala854Thr","LOC658521",658521,null,"658521 [Gene Symbol: LOC658521] [Locus Tag: TcasGA2_TC006467] [Chromosome: LG8] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC658521; TcasGA2_TC006467"]
[1408,"NC_007423.3",10177350,"SNV","T","C","Homozygous",23,23,100,1,9,16,0.36,38.35,25,25,15,13,null,1,1,"no","C/C","No",1,89.14,"XP_008197071.1:c.1055A>G","XP_008197071.1:p.Asn352Ser","LOC658890",658890,null,"658890 [Gene Symbol: LOC658890] [Locus Tag: TcasGA2_TC005649] [Chromosome: LG8] [Map Location: ] [Description: zinc finger CCHC domain-containing protein 4] [Gene Type: protein-coding]","LOC658890; TcasGA2_TC005649"]
[1409,"NC_007423.3",10243430,"SNV","C","A","Homozygous",21,21,100,1,8,13,0.38,38.19,21,21,10,15,null,1,1,"no","A/A","No",1,84.69,"XP_970807.1:c.[539C>A]; XP_008197080.1:c.[539C>A]","XP_970807.1:p.[Thr180Asn]; XP_008197080.1:p.[Thr180Asn]","LOC659405",659405,null,"659405 [Gene Symbol: LOC659405] [Locus Tag: TcasGA2_TC006477] [Chromosome: LG8] [Map Location: ] [Description: histone acetyltransferase KAT6A] [Gene Type: protein-coding]","LOC659405; TcasGA2_TC006477"]
[1410,"NC_007423.3",10243451,"SNV","G","A","Homozygous",20,20,100,1,8,12,0.4,38.2,20,20,12,14,null,1,1,"no","A/A","No",1,81.69,"XP_970807.1:c.[560G>A]; XP_008197080.1:c.[560G>A]","XP_970807.1:p.[Ser187Asn]; XP_008197080.1:p.[Ser187Asn]","LOC659405",659405,null,"659405 [Gene Symbol: LOC659405] [Locus Tag: TcasGA2_TC006477] [Chromosome: LG8] [Map Location: ] [Description: histone acetyltransferase KAT6A] [Gene Type: protein-coding]","LOC659405; TcasGA2_TC006477"]
[1411,"NC_007423.3",10411135,"SNV","T","C","Homozygous",24,24,100,1,5,20,0.2,38.42,25,25,12,15,null,1,1,"no","C/C","No",1,92.15,"XP_015838220.1:c.[196A>G]; XP_008197087.1:c.[196A>G]","XP_015838220.1:p.[Ser66Gly]; XP_008197087.1:p.[Ser66Gly]","LOC659803",659803,null,"659803 [Gene Symbol: LOC659803] [Locus Tag: TcasGA2_TC005640] [Chromosome: LG8] [Map Location: ] [Description: protein NDNF] [Gene Type: protein-coding]","TcasGA2_TC005640; LOC659803"]
[1412,"NC_007423.3",10412233,"SNV","T","C","Homozygous",23,23,100,1,13,17,0.43,35.17,30,30,8,15,null,1,1,"no","C/C","No",1,89.14,"XP_008197087.1:c.[43A>G]; XP_015838220.1:c.[43A>G]","XP_008197087.1:p.[Ile15Val]; XP_015838220.1:p.[Ile15Val]","LOC659803",659803,null,"659803 [Gene Symbol: LOC659803] [Locus Tag: TcasGA2_TC005640] [Chromosome: LG8] [Map Location: ] [Description: protein NDNF] [Gene Type: protein-coding]","TcasGA2_TC005640; LOC659803"]
[1413,"NC_007423.3",10416755,"SNV","C","G","Heterozygous",9,26,34.62,1,3,7,0.3,38.56,10,29,8,8,-0.57,0.92,1,"no","C/G","No",1,54.99,"XP_015838307.1:c.931C>G","XP_015838307.1:p.Leu311Val","LOC659872",659872,null,"659872 [Gene Symbol: LOC659872] [Locus Tag: TcasGA2_TC006482] [Chromosome: LG8] [Map Location: ] [Description: somatostatin receptor type 5] [Gene Type: protein-coding]","TcasGA2_TC006482; LOC659872"]
[1414,"NC_007423.3",10416771,"SNV","C","T","Heterozygous",12,27,44.44,1,3,10,0.23,38.92,13,28,7,7,-0.56,0.97,1,"no","C/T","No",1,90.36,"XP_015838307.1:c.947C>T","XP_015838307.1:p.Thr316Ile","LOC659872",659872,null,"659872 [Gene Symbol: LOC659872] [Locus Tag: TcasGA2_TC006482] [Chromosome: LG8] [Map Location: ] [Description: somatostatin receptor type 5] [Gene Type: protein-coding]","TcasGA2_TC006482; LOC659872"]
[1415,"NC_007423.3",10430867,"SNV","C","T","Homozygous",26,26,100,1,20,9,0.31,38.04,29,29,14,16,null,1,1,"no","T/T","No",1,99.74,"XP_015838267.1:c.232G>A","XP_015838267.1:p.Glu78Lys","LOC100142185",100142185,null,"100142185 [Gene Symbol: LOC100142185] [Locus Tag: TcasGA2_TC005635] [Chromosome: LG8] [Map Location: ] [Description: mite allergen Der p 3] [Gene Type: protein-coding]","TcasGA2_TC005635; H63; LOC100142185"]
[1416,"NC_007423.3",10430869,"SNV","G","T","Homozygous",26,26,100,1,20,9,0.31,37.5,29,29,14,16,null,1,1,"no","T/T","No",1,99.75,"XP_015838267.1:c.230C>A","XP_015838267.1:p.Ala77Glu","LOC100142185",100142185,null,"100142185 [Gene Symbol: LOC100142185] [Locus Tag: TcasGA2_TC005635] [Chromosome: LG8] [Map Location: ] [Description: mite allergen Der p 3] [Gene Type: protein-coding]","TcasGA2_TC005635; H63; LOC100142185"]
[1417,"NC_007423.3",10520802,"SNV","T","A","Homozygous",27,27,100,1,11,20,0.35,36.96,31,31,17,18,null,1,1,"no","A/A","No",1,102.75,"XP_015838078.1:c.[1078-16782A>T]; XP_015838076.1:c.[107A>T]; XP_972642.2:c.[1078-16782A>T]; XP_015838080.1:c.[1078-16782A>T]; XP_015838079.1:c.[1078-16782A>T]","XP_015838076.1:p.Lys36Met","LOC661389, LOC107398462","661389 , 107398462",null,"661389 [Gene Symbol: LOC661389] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: synaptotagmin 15] [Gene Type: protein-coding] || 107398462 [Gene Symbol: LOC107398462] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: aldehyde dehydrogenase, dimeric NADP-preferring-like] [Gene Type: protein-coding]","LOC661389; Syt15 || LOC107398462"]
[1418,"NC_007423.3",10547238,"SNV","T","C","Homozygous",20,20,100,1,10,10,0.5,37.9,20,20,12,14,null,1,1,"no","C/C","No",1,80.12,"XP_008197105.1:c.2633A>G","XP_008197105.1:p.Asp878Gly","LOC661389, LOC103314057","661389 , 103314057",null,"661389 [Gene Symbol: LOC661389] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: synaptotagmin 15] [Gene Type: protein-coding] || 103314057 [Gene Symbol: LOC103314057] [Locus Tag: TcasGA2_TC005621] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC661389; Syt15 || LOC103314057; TcasGA2_TC005621"]
[1419,"NC_007423.3",10548159,"SNV","C","T","Homozygous",24,24,100,1,9,17,0.35,37.17,26,26,12,14,null,1,1,"no","T/T","No",1,93.73,"XP_008197105.1:c.1712G>A","XP_008197105.1:p.Gly571Asp","LOC661389, LOC103314057","661389 , 103314057",null,"661389 [Gene Symbol: LOC661389] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: synaptotagmin 15] [Gene Type: protein-coding] || 103314057 [Gene Symbol: LOC103314057] [Locus Tag: TcasGA2_TC005621] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC661389; Syt15 || LOC103314057; TcasGA2_TC005621"]
[1420,"NC_007423.3",10564047,"SNV","T","G","Homozygous",20,20,100,1,12,13,0.48,38.3,25,25,11,16,null,1,1,"no","G/G","No",1,80.09,"XP_008197115.1:c.[1748-3579A>C]; XP_008197113.1:c.[180A>C]; XP_008197112.1:c.[1787-3579A>C]; XP_008197114.1:c.[1754-3579A>C]; XP_015838056.1:c.[3346+315A>C]; XP_008197117.1:c.[1741+315A>C]; XP_008197120.1:c.[1723+2218A>C]; XP_015838057.1:c.[1796-3579A>C]; XP_008197116.1:c.[1748-3579A>C]; XP_008197118.1:c.[1742-3579A>C]; XP_008197111.1:c.[1790-3579A>C]; XP_008197121.1:c.[1709-3579A>C]; XP_008197110.1:c.[1793-3579A>C]","XP_008197113.1:p.Gln60His","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1421,"NC_007423.3","10565320..10565323","MNV","CGAC","TATT","Homozygous",25,25,100,1,14,16,0.47,37.97,30,30,18,20,null,1,1,"no","TATT/TATT","No",1,200,"XP_008197114.1:c.[1754-4855_1754-4852delGTCGinsAATA]; XP_008197117.1:c.[780_783delGTCGinsAATA]; XP_008197110.1:c.[1793-4855_1793-4852delGTCGinsAATA]; XP_015838056.1:c.[2385_2388delGTCGinsAATA]; XP_008197118.1:c.[1741+4655_1741+4658delGTCGinsAATA]; XP_008197121.1:c.[1708+2798_1708+2801delGTCGinsAATA]; XP_008197111.1:c.[1790-4855_1790-4852delGTCGinsAATA]; XP_008197116.1:c.[1748-4855_1748-4852delGTCGinsAATA]; XP_015838057.1:c.[1796-4855_1796-4852delGTCGinsAATA]; XP_008197112.1:c.[1787-4855_1787-4852delGTCGinsAATA]; XP_008197120.1:c.[1723+942_1723+945delGTCGinsAATA]; XP_008197115.1:c.[1748-4855_1748-4852delGTCGinsAATA]","XP_008197117.1:p.[Ser261Ile]; XP_015838056.1:p.[Ser796Ile]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1422,"NC_007423.3",10565751,"SNV","G","C","Homozygous",20,20,100,1,6,14,0.3,37.6,20,20,11,12,null,1,1,"no","C/C","No",1,80.11,"XP_008197121.1:c.[1708+2370C>G]; XP_008197120.1:c.[1723+514C>G]; XP_015838056.1:c.[1957C>G]; XP_008197110.1:c.[1793-5283C>G]; XP_008197115.1:c.[1748-5283C>G]; XP_008197117.1:c.[352C>G]; XP_008197111.1:c.[1790-5283C>G]; XP_008197116.1:c.[1748-5283C>G]; XP_015838057.1:c.[1796-5283C>G]; XP_008197114.1:c.[1754-5283C>G]; XP_008197112.1:c.[1787-5283C>G]; XP_008197118.1:c.[1741+4227C>G]","XP_015838056.1:p.[Leu653Val]; XP_008197117.1:p.[Leu118Val]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1423,"NC_007423.3",10567236,"SNV","G","A","Homozygous",20,20,100,1,12,9,0.43,39.45,21,21,14,15,null,1,1,"no","A/A","No",1,81.69,"XP_015838057.1:c.[1795+4631C>T]; XP_008197114.1:c.[1754-6768C>T]; XP_008197120.1:c.[752C>T]; XP_015838056.1:c.[752C>T]; XP_008197111.1:c.[1790-6768C>T]; XP_008197115.1:c.[1747+4631C>T]; XP_008197112.1:c.[1787-6768C>T]; XP_008197118.1:c.[1741+2742C>T]; XP_008197121.1:c.[1708+885C>T]; XP_008197110.1:c.[1793-6768C>T]; XP_008197116.1:c.[1747+6532C>T]","XP_008197120.1:p.[Thr251Met]; XP_015838056.1:p.[Thr251Met]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1424,"NC_007423.3",10569829,"SNV","T","C","Homozygous",22,22,100,1,11,12,0.48,38.91,23,23,13,15,null,1,1,"no","C/C","No",1,86.14,"XP_008197110.1:c.[1793-9361A>G]; XP_008197114.1:c.[1753+5849A>G]; XP_008197118.1:c.[1741+149A>G]; XP_015838057.1:c.[1795+2038A>G]; XP_008197112.1:c.[1786+8083A>G]; XP_008197121.1:c.[50A>G]; XP_008197116.1:c.[1747+3939A>G]; XP_008197111.1:c.[1789+8083A>G]; XP_008197115.1:c.[1747+2038A>G]","XP_008197121.1:p.Asn17Ser","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1425,"NC_007423.3","10573875..10573876","MNV","GC","AT","Homozygous",21,21,100,1,10,13,0.43,38.88,23,23,14,17,null,1,1,"no","AT/AT","No",1,200,"XP_008197110.1:c.[1792+8042_1792+8043delGCinsAT]; XP_008197111.1:c.[1789+4036_1789+4037delGCinsAT]; XP_008197112.1:c.[1786+4036_1786+4037delGCinsAT]; XP_008197114.1:c.[1753+1802_1753+1803delGCinsAT]; XP_008197116.1:c.[1639_1640delGCinsAT]","XP_008197116.1:p.Ala547Ile","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1426,"NC_007423.3",10591540,"SNV","T","C","Homozygous",21,21,100,1,11,10,0.48,36.29,21,21,13,15,null,1,1,"no","C/C","No",1,83.12,"XP_972898.1:c.1612A>G","XP_972898.1:p.Lys538Glu","LOC661655",661655,null,"661655 [Gene Symbol: LOC661655] [Locus Tag: TcasGA2_TC005617] [Chromosome: LG8] [Map Location: ] [Description: DNA mismatch repair protein Mlh1] [Gene Type: protein-coding]","TcasGA2_TC005617; LOC661655"]
[1427,"NC_007423.3",10612527,"SNV","A","T","Homozygous",23,25,92,1,17,7,0.29,38.13,24,26,10,18,null,0.99,0.99,"no","T/T","No",1,34.88,"XP_015838055.1:c.[4166A>T]; XP_008197127.1:c.[4166A>T]; XP_008197125.1:c.[4166A>T]","XP_015838055.1:p.[Tyr1389Phe]; XP_008197127.1:p.[Tyr1389Phe]; XP_008197125.1:p.[Tyr1389Phe]","LOC661900",661900,null,"661900 [Gene Symbol: LOC661900] [Locus Tag: TcasGA2_TC006498] [Chromosome: LG8] [Map Location: ] [Description: WD repeat-containing protein 81] [Gene Type: protein-coding]","TcasGA2_TC006498; LOC661900"]
[1428,"NC_007423.3",10613024,"SNV","G","A","Homozygous",22,22,100,1,11,13,0.46,35.45,24,24,13,14,null,1,1,"no","A/A","No",1,87.7,"XP_008197127.1:c.[4663G>A]; XP_008197125.1:c.[4663G>A]; XP_015838055.1:c.[4663G>A]","XP_008197127.1:p.[Ala1555Thr]; XP_008197125.1:p.[Ala1555Thr]; XP_015838055.1:p.[Ala1555Thr]","LOC661900",661900,null,"661900 [Gene Symbol: LOC661900] [Locus Tag: TcasGA2_TC006498] [Chromosome: LG8] [Map Location: ] [Description: WD repeat-containing protein 81] [Gene Type: protein-coding]","TcasGA2_TC006498; LOC661900"]
[1429,"NC_007423.3",10613048,"SNV","T","A","Homozygous",23,23,100,1,13,12,0.48,38.04,25,25,13,15,null,1,1,"no","A/A","No",1,90.72,"XP_008197127.1:c.[4687T>A]; XP_015838055.1:c.[4687T>A]; XP_008197125.1:c.[4687T>A]","XP_008197127.1:p.[Cys1563Ser]; XP_015838055.1:p.[Cys1563Ser]; XP_008197125.1:p.[Cys1563Ser]","LOC661900",661900,null,"661900 [Gene Symbol: LOC661900] [Locus Tag: TcasGA2_TC006498] [Chromosome: LG8] [Map Location: ] [Description: WD repeat-containing protein 81] [Gene Type: protein-coding]","TcasGA2_TC006498; LOC661900"]
[1430,"NC_007423.3",10618400,"SNV","C","T","Homozygous",21,23,91.3,1,6,17,0.26,37.62,23,25,13,14,null,0.96,1,"no","T/T","No",1,29.73,"XP_008197128.1:c.[1231G>A]; XP_008197129.1:c.[961G>A]","XP_008197128.1:p.[Gly411Ser]; XP_008197129.1:p.[Gly321Ser]","LOC661943",661943,null,"661943 [Gene Symbol: LOC661943] [Locus Tag: TcasGA2_TC005613] [Chromosome: LG8] [Map Location: ] [Description: surface protein] [Gene Type: protein-coding]","TcasGA2_TC005613; LOC661943"]
[1431,"NC_007423.3",10638108,"SNV","G","C","Homozygous",22,22,100,1,15,10,0.4,38.32,25,25,15,18,null,1,1,"no","C/C","No",1,86.14,"XP_975851.1:c.[468C>G]; XP_966427.1:c.[519C>G]","XP_975851.1:p.[Phe156Leu]; XP_966427.1:p.[Phe173Leu]","LOC659433",659433,null,"659433 [Gene Symbol: LOC659433] [Locus Tag: TcasGA2_TC005611] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat domain-containing protein 40] [Gene Type: protein-coding]","TcasGA2_TC005611; LOC659433"]
[1432,"NC_007423.3",10638110,"SNV","A","G","Homozygous",22,22,100,1,14,10,0.42,37.77,24,24,15,18,null,1,1,"no","G/G","No",1,86.11,"XP_975851.1:c.[466T>C]; XP_966427.1:c.[517T>C]","XP_975851.1:p.[Phe156Leu]; XP_966427.1:p.[Phe173Leu]","LOC659433",659433,null,"659433 [Gene Symbol: LOC659433] [Locus Tag: TcasGA2_TC005611] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat domain-containing protein 40] [Gene Type: protein-coding]","TcasGA2_TC005611; LOC659433"]
[1433,"NC_007423.3","10641705..10641706","MNV","CG","GC","Heterozygous",8,21,38.1,1,3,5,0.38,39.06,8,26,4,8,null,0.25,0.84,"no","complex","No",1,200,"XP_973309.2:c.[366_367delCGinsGC]; XP_008197132.1:c.[276_277delCGinsGC]","XP_973309.2:p.[Val123Leu]; XP_008197132.1:p.[Val93Leu]","LOC662097",662097,null,"662097 [Gene Symbol: LOC662097] [Locus Tag: TcasGA2_TC006500] [Chromosome: LG8] [Map Location: ] [Description: nucleoside diphosphate-linked moiety X motif 6] [Gene Type: protein-coding]","TcasGA2_TC006500; LOC662097"]
[1434,"NC_007423.3",10649919,"SNV","G","C","Homozygous",21,23,91.3,1,12,9,0.43,36.62,21,23,11,14,null,1,1,"no","C/C","No",1,28.12,"XP_015838059.1:c.[3927G>C]; XP_015838058.1:c.[3939G>C]; XP_015838060.1:c.[3813G>C]; XP_008197135.1:c.[3939G>C]","XP_015838059.1:p.[Glu1309Asp]; XP_015838058.1:p.[Glu1313Asp]; XP_015838060.1:p.[Glu1271Asp]; XP_008197135.1:p.[Glu1313Asp]","LOC662167",662167,null,"662167 [Gene Symbol: LOC662167] [Locus Tag: TcasGA2_TC006501] [Chromosome: LG8] [Map Location: ] [Description: E3 ubiquitin-protein ligase RBBP6] [Gene Type: protein-coding]","TcasGA2_TC006501; LOC662167"]
[1435,"NC_007423.3","10649944..10649945","MNV","AC","GT","Homozygous",21,21,100,1,12,9,0.43,37.95,21,21,12,15,null,1,1,"no","GT/GT","No",1,200,"XP_015838058.1:c.[3964_3965delACinsGT]; XP_015838059.1:c.[3952_3953delACinsGT]; XP_015838060.1:c.[3838_3839delACinsGT]; XP_008197135.1:c.[3964_3965delACinsGT]","XP_015838058.1:p.[Thr1322Val]; XP_015838059.1:p.[Thr1318Val]; XP_015838060.1:p.[Thr1280Val]; XP_008197135.1:p.[Thr1322Val]","LOC662167",662167,null,"662167 [Gene Symbol: LOC662167] [Locus Tag: TcasGA2_TC006501] [Chromosome: LG8] [Map Location: ] [Description: E3 ubiquitin-protein ligase RBBP6] [Gene Type: protein-coding]","TcasGA2_TC006501; LOC662167"]
[1436,"NC_007423.3",10725578,"SNV","T","G","Heterozygous",10,31,32.26,1,6,5,0.45,37.2,11,32,5,6,-1.18,0.03,0.77,"no","G/T","No",1,54.5,"XP_015838072.1:c.[1318A>C]; XP_008197143.1:c.[2308-2409T>G]; XP_966958.1:c.[1522A>C]","XP_015838072.1:p.[Ile440Leu]; XP_966958.1:p.[Ile508Leu]","LOC662523, LOC660970","662523 , 660970",null,"662523 [Gene Symbol: LOC662523] [Locus Tag: TcasGA2_TC006507] [Chromosome: LG8] [Map Location: ] [Description: cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B] [Gene Type: protein-coding] || 660970 [Gene Symbol: LOC660970] [Locus Tag: TcasGA2_TC005601] [Chromosome: LG8] [Map Location: ] [Description: proline-rich extensin-like protein EPR1] [Gene Type: protein-coding]","TcasGA2_TC006507; LOC662523 || TcasGA2_TC005601; LOC660970"]
[1437,"NC_007423.3",10784526,"SNV","T","G","Homozygous",22,22,100,1,10,14,0.42,38.23,24,24,10,15,null,1,1,"no","G/G","No",1,86.11,"XP_008197146.1:c.[77T>G]; XP_015838069.1:c.[77T>G]; XP_015838070.1:c.[77T>G]","XP_008197146.1:p.[Val26Gly]; XP_015838069.1:p.[Val26Gly]; XP_015838070.1:p.[Val26Gly]","LOC662523",662523,null,"662523 [Gene Symbol: LOC662523] [Locus Tag: TcasGA2_TC006507] [Chromosome: LG8] [Map Location: ] [Description: cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B] [Gene Type: protein-coding]","TcasGA2_TC006507; LOC662523"]
[1438,"NC_007423.3",10853524,"SNV","T","C","Heterozygous",7,21,33.33,1,0,7,0,39.71,7,22,2,3,1.04,0.49,0.56,"no","C/T","No",1,44.68,"XP_973830.1:c.728A>G","XP_973830.1:p.Lys243Arg","LOC662653",662653,null,"662653 [Gene Symbol: LOC662653] [Locus Tag: TcasGA2_TC005596] [Chromosome: LG8] [Map Location: ] [Description: short-chain specific acyl-CoA dehydrogenase, mitochondrial] [Gene Type: protein-coding]","LOC662653; TcasGA2_TC005596"]
[1439,"NC_007423.3",10974677,"SNV","T","C","Homozygous",20,20,100,1,5,17,0.23,37.4,22,22,13,14,null,1,1,"no","C/C","No",1,80.11,"XP_008196952.1:c.8T>C","XP_008196952.1:p.Val3Ala","LOC655008",655008,null,"655008 [Gene Symbol: LOC655008] [Locus Tag: TcasGA2_TC006523] [Chromosome: LG8] [Map Location: ] [Description: HEAT repeat-containing protein 6] [Gene Type: protein-coding]","LOC655008; TcasGA2_TC006523"]
[1440,"NC_007423.3",10976852,"SNV","G","A","Homozygous",25,25,100,1,9,18,0.33,38,27,27,9,16,null,1,1,"no","A/A","No",1,96.73,"XP_008196952.1:c.1681G>A","XP_008196952.1:p.Val561Ile","LOC655008",655008,null,"655008 [Gene Symbol: LOC655008] [Locus Tag: TcasGA2_TC006523] [Chromosome: LG8] [Map Location: ] [Description: HEAT repeat-containing protein 6] [Gene Type: protein-coding]","LOC655008; TcasGA2_TC006523"]
[1441,"NC_007423.3",10993775,"SNV","G","C","Homozygous",30,30,100,1,24,11,0.31,34.77,35,35,12,16,null,1,1,"no","C/C","No",1,110.21,"XP_015838142.1:c.[385C>G]; XP_015838144.1:c.[385C>G]; XP_015838143.1:c.[385C>G]","XP_015838142.1:p.[Leu129Val]; XP_015838144.1:p.[Leu129Val]; XP_015838143.1:p.[Leu129Val]","LOC655219",655219,null,"655219 [Gene Symbol: LOC655219] [Locus Tag: TcasGA2_TC005587] [Chromosome: LG8] [Map Location: ] [Description: ubiquitin carboxyl-terminal hydrolase 16] [Gene Type: protein-coding]","TcasGA2_TC005587; LOC655219"]
[1442,"NC_007423.3",11000796,"SNV","A","T","Heterozygous",4,20,20,0.74,4,0,0,36.75,4,20,1,3,null,0.15,0.18,"no","G/T","No",1,5.8,"XP_008196910.1:c.781T>A","XP_008196910.1:p.Leu261Ile","LOC655379",655379,null,"655379 [Gene Symbol: LOC655379] [Locus Tag: TcasGA2_TC005586] [Chromosome: LG8] [Map Location: ] [Description: vacuolar protein sorting-associated protein 11 homolog] [Gene Type: protein-coding]","TcasGA2_TC005586; LOC655379"]
[1443,"NC_007423.3","11004028..11004029","MNV","GG","CA","Homozygous",26,26,100,1,11,15,0.42,38.75,26,26,16,17,null,1,1,"no","CA/CA","No",1,200,"XP_001807778.1:c.315_316delCCinsTG","XP_001807778.1:p.Leu106Val","LOC100142430",100142430,null,"100142430 [Gene Symbol: LOC100142430] [Locus Tag: TcasGA2_TC005585] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase alpha subunit B] [Gene Type: protein-coding]","TcasGA2_TC005585; LOC100142430"]
[1444,"NC_007423.3",11004034,"SNV","C","A","Homozygous",27,27,100,1,13,14,0.48,37.07,27,27,16,18,null,1,1,"no","A/A","No",1,102.74,"XP_001807778.1:c.310G>T","XP_001807778.1:p.Val104Phe","LOC100142430",100142430,null,"100142430 [Gene Symbol: LOC100142430] [Locus Tag: TcasGA2_TC005585] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase alpha subunit B] [Gene Type: protein-coding]","TcasGA2_TC005585; LOC100142430"]
[1445,"NC_007423.3",11004295,"SNV","A","T","Homozygous",22,22,100,1,6,20,0.23,37.23,26,26,11,11,null,1,1,"no","T/T","No",1,87.71,"XP_001807778.1:c.49T>A","XP_001807778.1:p.Ser17Thr","LOC100142430",100142430,null,"100142430 [Gene Symbol: LOC100142430] [Locus Tag: TcasGA2_TC005585] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase alpha subunit B] [Gene Type: protein-coding]","TcasGA2_TC005585; LOC100142430"]
[1446,"NC_007423.3","11011151..11011152","MNV","CC","GT","Homozygous",20,20,100,1,5,16,0.24,37.28,21,21,11,14,null,1,1,"no","GT/GT","No",1,200,"XP_008196911.1:c.[1689_1690delGGinsAC]; XP_015838191.1:c.[1716_1717delGGinsAC]; XP_015838190.1:c.[1716_1717delGGinsAC]","XP_008196911.1:p.[Ala564Pro]; XP_015838191.1:p.[Ala573Pro]; XP_015838190.1:p.[Ala573Pro]","LOC655543",655543,null,"655543 [Gene Symbol: LOC655543] [Locus Tag: TcasGA2_TC005584] [Chromosome: LG8] [Map Location: ] [Description: transcription elongation factor SPT6] [Gene Type: protein-coding]","TcasGA2_TC005584; LOC655543"]
[1447,"NC_007423.3",11055584,"SNV","C","T","Homozygous",21,21,100,1,12,15,0.44,37.81,27,27,15,14,null,1,1,"no","T/T","No",1,84.7,"XP_967759.1:c.862G>A","XP_967759.1:p.Val288Ile","LOC656117",656117,null,"656117 [Gene Symbol: LOC656117] [Locus Tag: TcasGA2_TC005581] [Chromosome: LG8] [Map Location: ] [Description: olfactory receptor 18] [Gene Type: protein-coding]","Or72; TcasGA2_TC005581; or18; LOC656117"]
[1448,"NC_007423.3",11055932,"SNV","A","G","Homozygous",19,20,95,1,7,15,0.32,39.26,22,23,10,12,null,1,1,"no","G/G","No",1,52.15,"XP_967759.1:c.560T>C","XP_967759.1:p.Ile187Thr","LOC656117",656117,null,"656117 [Gene Symbol: LOC656117] [Locus Tag: TcasGA2_TC005581] [Chromosome: LG8] [Map Location: ] [Description: olfactory receptor 18] [Gene Type: protein-coding]","Or72; TcasGA2_TC005581; or18; LOC656117"]
[1449,"NC_007423.3",11061981,"SNV","T","G","Homozygous",17,21,80.95,0.6,7,10,0.41,36.71,17,21,10,10,0.22,0.81,0.93,"no","G/T","No",1,3.95,"XP_967920.2:c.155A>C","XP_967920.2:p.Gln52Pro","LOC656286",656286,null,"656286 [Gene Symbol: LOC656286] [Locus Tag: TcasGA2_TC005579] [Chromosome: LG8] [Map Location: ] [Description: protein atonal homolog 8] [Gene Type: protein-coding]","LOC656286; TcasGA2_TC005579"]
[1450,"NC_007423.3",11111511,"SNV","G","A","Heterozygous",15,22,68.18,1,9,6,0.4,38.07,15,22,7,11,1.09,0.97,1,"no","A/G","No",1,41.7,"XP_008196922.1:c.212G>A","XP_008196922.1:p.Ser71Asn","LOC656781",656781,null,"656781 [Gene Symbol: LOC656781] [Locus Tag: TcasGA2_TC006533] [Chromosome: LG8] [Map Location: ] [Description: alcohol dehydrogenase [acceptor]] [Gene Type: protein-coding]","TcasGA2_TC006533; LOC656781"]
[1451,"NC_007423.3",11112753,"SNV","G","C","Heterozygous",16,20,80,0.86,11,7,0.39,36.62,18,23,10,13,1.32,0.99,1,"no","C/G","No",1,8.5,"XP_008196922.1:c.[975G>C]; XP_008196923.1:c.[693G>C]","XP_008196922.1:p.[Glu325Asp]; XP_008196923.1:p.[Glu231Asp]","LOC656781",656781,null,"656781 [Gene Symbol: LOC656781] [Locus Tag: TcasGA2_TC006533] [Chromosome: LG8] [Map Location: ] [Description: alcohol dehydrogenase [acceptor]] [Gene Type: protein-coding]","TcasGA2_TC006533; LOC656781"]
[1452,"NC_007423.3",11134216,"SNV","C","G","Homozygous",20,20,100,1,9,11,0.45,36.75,20,20,11,13,null,1,1,"no","G/G","No",1,80.09,"XP_968771.1:c.1282G>C","XP_968771.1:p.Ala428Pro","LOC657207",657207,null,"657207 [Gene Symbol: LOC657207] [Locus Tag: TcasGA2_TC005570] [Chromosome: LG8] [Map Location: ] [Description: peptidyl-prolyl cis-trans isomerase-like 4] [Gene Type: protein-coding]","LOC657207; TcasGA2_TC005570"]
[1453,"NC_007423.3",11134233,"SNV","C","T","Heterozygous",12,24,50,1,8,4,0.33,38.5,12,24,5,8,-1.07,0.64,0.9,"no","C/T","No",1,96.35,"XP_968771.1:c.1265G>A","XP_968771.1:p.Arg422Lys","LOC657207",657207,null,"657207 [Gene Symbol: LOC657207] [Locus Tag: TcasGA2_TC005570] [Chromosome: LG8] [Map Location: ] [Description: peptidyl-prolyl cis-trans isomerase-like 4] [Gene Type: protein-coding]","LOC657207; TcasGA2_TC005570"]
[1454,"NC_007423.3",11134255,"SNV","C","T","Heterozygous",11,25,44,1,4,7,0.36,38.82,11,25,5,5,1.23,0.31,0.93,"no","C/T","No",1,83.13,"XP_968771.1:c.1243G>A","XP_968771.1:p.Ala415Thr","LOC657207",657207,null,"657207 [Gene Symbol: LOC657207] [Locus Tag: TcasGA2_TC005570] [Chromosome: LG8] [Map Location: ] [Description: peptidyl-prolyl cis-trans isomerase-like 4] [Gene Type: protein-coding]","LOC657207; TcasGA2_TC005570"]
[1455,"NC_007423.3",11248203,"SNV","T","G","Heterozygous",7,21,33.33,1,1,6,0.14,38.14,7,21,5,2,-0.86,0.88,0.74,"no","G/T","No",1,44.04,"NP_001161780.1:c.785A>C","NP_001161780.1:p.Lys262Thr","Y-f",657666,"yellow-f","657666 [Gene Symbol: Y-f] [Locus Tag: TcasGA2_TC005565] [Chromosome: LG8] [Map Location: ] [Description: yellow-f] [Gene Type: protein-coding]","TcasGA2_TC005565; Y-f"]
[1456,"NC_007423.3","11268035..11268036","MNV","GG","AC","Homozygous",23,23,100,1,12,13,0.48,37.35,25,25,12,16,null,1,1,"no","AC/AC","No",1,200,"XP_969351.1:c.303_304delGGinsAC","XP_969351.1:p.Glu102Gln","LOC657823",657823,null,"657823 [Gene Symbol: LOC657823] [Locus Tag: TcasGA2_TC006543] [Chromosome: LG8] [Map Location: ] [Description: pyruvate kinase] [Gene Type: protein-coding]","LOC657823; TcasGA2_TC006543"]
[1457,"NC_007423.3",11268907,"SNV","G","C","Heterozygous",12,27,44.44,1,9,3,0.25,38.67,12,33,5,7,1.1,0.18,0.89,"no","C/G","No",1,90.48,"XP_969351.1:c.1175G>C","XP_969351.1:p.Ser392Thr","LOC657823",657823,null,"657823 [Gene Symbol: LOC657823] [Locus Tag: TcasGA2_TC006543] [Chromosome: LG8] [Map Location: ] [Description: pyruvate kinase] [Gene Type: protein-coding]","LOC657823; TcasGA2_TC006543"]
[1458,"NC_007423.3",11313585,"SNV","C","T","Heterozygous",7,20,35,1,1,6,0.14,36.86,7,22,3,3,-2.1,0.28,0.77,"no","C/T","No",1,46.27,"XP_008196931.1:c.[1696C>T]; XP_008196930.1:c.[1696C>T]; XP_969794.1:c.[1696C>T]","XP_008196931.1:p.[Pro566Ser]; XP_008196930.1:p.[Pro566Ser]; XP_969794.1:p.[Pro566Ser]","LOC658299",658299,null,"658299 [Gene Symbol: LOC658299] [Locus Tag: TcasGA2_TC006548] [Chromosome: LG8] [Map Location: ] [Description: regulatory-associated protein of mTOR] [Gene Type: protein-coding]","TcasGA2_TC006548; LOC658299"]
[1459,"NC_007423.3",11314728,"SNV","C","T","Heterozygous",15,24,62.5,1,11,5,0.31,38.67,16,25,6,13,1.58,0.95,1,"no","C/T","No",1,61.82,"XP_969794.1:c.[2788C>T]; XP_008196931.1:c.[2788C>T]; XP_008196930.1:c.[2788C>T]","XP_969794.1:p.[Leu930Phe]; XP_008196931.1:p.[Leu930Phe]; XP_008196930.1:p.[Leu930Phe]","LOC658299",658299,null,"658299 [Gene Symbol: LOC658299] [Locus Tag: TcasGA2_TC006548] [Chromosome: LG8] [Map Location: ] [Description: regulatory-associated protein of mTOR] [Gene Type: protein-coding]","TcasGA2_TC006548; LOC658299"]
[1460,"NC_007423.3",11319637,"SNV","T","C","Homozygous",20,20,100,1,15,9,0.38,36.45,24,24,11,10,null,1,1,"no","C/C","No",1,80.12,"XP_008196932.1:c.628A>G","XP_008196932.1:p.Thr210Ala","LOC658372",658372,null,"658372 [Gene Symbol: LOC658372] [Locus Tag: TcasGA2_TC005562] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter] [Gene Type: protein-coding]","TcasGA2_TC005562; LOC658372"]
[1461,"NC_007423.3",11320290,"SNV","A","G","Homozygous",26,26,100,1,21,5,0.19,39.42,26,26,9,20,null,1,1,"no","G/G","No",1,98.15,"XP_008196932.1:c.22T>C","XP_008196932.1:p.Ser8Pro","LOC658372",658372,null,"658372 [Gene Symbol: LOC658372] [Locus Tag: TcasGA2_TC005562] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter] [Gene Type: protein-coding]","TcasGA2_TC005562; LOC658372"]
[1462,"NC_007423.3",11403707,"SNV","G","C","Homozygous",22,22,100,1,12,11,0.48,38.77,23,23,10,13,null,1,1,"no","C/C","No",1,86.13,"XP_008196946.1:c.683C>G","XP_008196946.1:p.Ala228Gly","LOC660251, LOC659804","660251 , 659804",null,"660251 [Gene Symbol: LOC660251] [Locus Tag: TcasGA2_TC006562] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660251] [Gene Type: protein-coding] || 659804 [Gene Symbol: LOC659804] [Locus Tag: TcasGA2_TC005552] [Chromosome: LG8] [Map Location: ] [Description: WW domain-binding protein 2] [Gene Type: protein-coding]","LOC660251; TcasGA2_TC006562 || LOC659804; TcasGA2_TC005552"]
[1463,"NC_007423.3",11407313,"SNV","C","T","Homozygous",20,20,100,1,6,15,0.29,35.2,21,21,12,12,null,1,1,"no","T/T","No",1,81.7,"XP_971233.1:c.205G>A","XP_971233.1:p.Ala69Thr","LOC660251, LOC659873","660251 , 659873",null,"660251 [Gene Symbol: LOC660251] [Locus Tag: TcasGA2_TC006562] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660251] [Gene Type: protein-coding] || 659873 [Gene Symbol: LOC659873] [Locus Tag: TcasGA2_TC005551] [Chromosome: LG8] [Map Location: ] [Description: cell cycle checkpoint protein RAD17] [Gene Type: protein-coding]","LOC660251; TcasGA2_TC006562 || TcasGA2_TC005551; LOC659873"]
[1464,"NC_007423.3",11436707,"SNV","C","G","Homozygous",25,25,100,1,18,10,0.36,37.6,28,28,16,19,null,1,1,"no","G/G","No",1,92.12,"XP_015838198.1:c.[1563C>G]; XP_015838197.1:c.[1563C>G]; XP_015838199.1:c.[1560C>G]; XP_008196948.1:c.[1362C>G]","XP_015838198.1:p.[Ile521Met]; XP_015838197.1:p.[Ile521Met]; XP_015838199.1:p.[Ile520Met]; XP_008196948.1:p.[Ile454Met]","LOC660251",660251,null,"660251 [Gene Symbol: LOC660251] [Locus Tag: TcasGA2_TC006562] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660251] [Gene Type: protein-coding]","LOC660251; TcasGA2_TC006562"]
[1465,"NC_007423.3",11438389,"SNV","C","G","Heterozygous",5,20,25,0.99,5,0,0,36,5,20,4,4,-0.83,0.93,0.72,"no","C/G","No",1,20.64,"XP_008196951.1:c.64C>G","XP_008196951.1:p.Gln22Glu","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1466,"NC_007423.3",11438397,"SNV","C","A","Heterozygous",5,21,23.81,0.96,5,0,0,35.4,5,22,4,4,-1.11,0.32,0.74,"no","A/C","No",1,14.49,"XP_008196951.1:c.72C>A","XP_008196951.1:p.His24Gln","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1467,"NC_007423.3",11438462,"SNV","A","G","Heterozygous",12,23,52.17,1,10,2,0.17,39.75,12,27,6,8,2.71,0.11,0.71,"no","A/G","No",1,88.82,"XP_008196951.1:c.137A>G","XP_008196951.1:p.Tyr46Cys","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1468,"NC_007423.3",11438470,"SNV","G","A","Heterozygous",13,23,56.52,1,11,2,0.15,39.31,13,26,7,9,2.91,0.12,0.6,"no","A/G","No",1,77.24,"XP_008196951.1:c.145G>A","XP_008196951.1:p.Asp49Asn","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1469,"NC_007423.3",11438486,"SNV","A","T","Heterozygous",14,28,50,1,10,5,0.33,34.64,15,29,7,9,-1.22,0.43,0.81,"no","A/T","No",1,110.24,"XP_008196951.1:c.161A>T","XP_008196951.1:p.Glu54Val","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1470,"NC_007423.3",11438552,"SNV","A","T","Heterozygous",20,28,71.43,1,8,14,0.36,38.5,22,33,10,12,0.1,0.99,1,"no","A/T","No",1,36.63,"XP_008196951.1:c.227A>T","XP_008196951.1:p.Tyr76Phe","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1471,"NC_007423.3",11438871,"SNV","A","C","Heterozygous",8,21,38.1,1,5,4,0.44,37.75,9,24,5,4,-0.14,0.62,0.96,"no","A/C","No",1,57,"XP_008196951.1:c.546A>C","XP_008196951.1:p.Leu182Phe","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1472,"NC_007423.3",11439109,"SNV","A","T","Heterozygous",8,29,27.59,1,5,8,0.38,38,13,38,6,7,-1.66,0.4,0.96,"no","A/T","No",1,33.97,"XP_008196951.1:c.784A>T","XP_008196951.1:p.Ile262Leu","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1473,"NC_007423.3",11439128,"SNV","A","G","Homozygous",34,34,100,1,20,17,0.46,38.91,37,37,17,24,null,1,1,"no","G/G","No",1,122.22,"XP_008196951.1:c.803A>G","XP_008196951.1:p.Asn268Ser","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1474,"NC_007423.3",11439182,"SNV","C","G","Heterozygous",16,26,61.54,1,9,7,0.44,37,16,28,11,9,-1.03,0.63,0.89,"no","C/G","No",1,67.73,"XP_008196951.1:c.857C>G","XP_008196951.1:p.Ala286Gly","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1475,"NC_007423.3",11439189,"SNV","C","G","Heterozygous",17,26,65.38,1,9,9,0.5,36.47,18,29,11,10,-0.24,0.8,0.89,"no","C/G","No",1,54.95,"XP_008196951.1:c.864C>G","XP_008196951.1:p.Asn288Lys","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1476,"NC_007423.3","11439210..11439211","MNV","GT","CC","Heterozygous",17,27,62.96,1,8,11,0.42,38.71,19,29,13,13,1.77,0.9,0.86,"no","complex","No",1,200,"XP_008196951.1:c.885_886delGTinsCC","XP_008196951.1:p.Tyr296His","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1477,"NC_007423.3",11439461,"SNV","A","G","Heterozygous",10,24,41.67,1,1,10,0.09,35.6,11,26,5,6,-2.78,0.26,0.4,"no","A/G","No",1,74.44,"XP_008196951.1:c.1136A>G","XP_008196951.1:p.Asn379Ser","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1478,"NC_007423.3",11439465,"SNV","G","C","Heterozygous",10,25,40,1,1,10,0.09,35.7,11,27,5,6,-2.47,0.13,0.33,"no","C/G","No",1,70.48,"XP_008196951.1:c.1140G>C","XP_008196951.1:p.Arg380Ser","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1479,"NC_007423.3",11439467,"SNV","A","C","Heterozygous",10,23,43.48,1,1,10,0.09,36.2,11,25,5,6,-2.17,0.19,0.36,"no","A/C","No",1,76.93,"XP_008196951.1:c.1142A>C","XP_008196951.1:p.Asp381Ala","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1480,"NC_007423.3",11439481,"SNV","T","C","Heterozygous",14,23,60.87,1,10,6,0.38,38.36,16,25,9,10,0.03,0.62,0.55,"no","C/T","No",1,63.34,"XP_008196951.1:c.1156T>C","XP_008196951.1:p.Phe386Leu","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1481,"NC_007423.3",11441233,"SNV","C","G","Homozygous",23,23,100,1,17,9,0.35,38.74,26,26,14,17,null,1,1,"no","G/G","No",1,89.12,"XP_008196951.1:c.2908C>G","XP_008196951.1:p.Pro970Ala","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1482,"NC_007423.3",11452317,"SNV","T","C","Homozygous",21,21,100,1,7,14,0.33,37.05,21,21,11,13,null,1,1,"no","C/C","No",1,83.12,"XP_971760.1:c.373T>C","XP_971760.1:p.Ser125Pro","LOC660436",660436,null,"660436 [Gene Symbol: LOC660436] [Locus Tag: TcasGA2_TC006566] [Chromosome: LG8] [Map Location: ] [Description: cytidine deaminase] [Gene Type: protein-coding]","LOC660436; TcasGA2_TC006566"]
[1483,"NC_007423.3",11605921,"SNV","C","T","Heterozygous",5,21,23.81,0.98,5,0,0,37.4,5,24,3,3,-0.08,0.69,0.28,"no","C/T","No",1,18.07,"XP_972853.1:c.212G>A","XP_972853.1:p.Ser71Asn","LOC661609",661609,null,"661609 [Gene Symbol: LOC661609] [Locus Tag: TcasGA2_TC005538] [Chromosome: LG8] [Map Location: ] [Description: THO complex subunit 5 homolog] [Gene Type: protein-coding]","LOC661609; TcasGA2_TC005538"]
[1484,"NC_007423.3",11606131,"SNV","G","A","Homozygous",17,20,85,0.71,12,7,0.37,38.18,19,22,12,13,null,0.83,1,"no","A/A","No",1,5.31,"XP_972853.1:c.53C>T","XP_972853.1:p.Ala18Val","LOC661609",661609,null,"661609 [Gene Symbol: LOC661609] [Locus Tag: TcasGA2_TC005538] [Chromosome: LG8] [Map Location: ] [Description: THO complex subunit 5 homolog] [Gene Type: protein-coding]","LOC661609; TcasGA2_TC005538"]
[1485,"NC_007423.3",11732931,"SNV","T","C","Homozygous",24,24,100,1,16,11,0.41,38.88,27,27,14,13,null,1,1,"no","C/C","No",1,92.14,"XP_008196971.1:c.2284A>G","XP_008196971.1:p.Thr762Ala","LOC662098",662098,null,"662098 [Gene Symbol: LOC662098] [Locus Tag: TcasGA2_TC005530] [Chromosome: LG8] [Map Location: ] [Description: ATPase family AAA domain-containing protein 5] [Gene Type: protein-coding]","TcasGA2_TC005530; LOC662098"]
[1486,"NC_007423.3",11735098,"SNV","C","A","Heterozygous",7,20,35,1,4,3,0.43,37.86,7,22,2,6,0.44,0.97,0.99,"no","A/C","No",1,42.6,"XP_008196971.1:c.172G>T","XP_008196971.1:p.Ala58Ser","LOC662098",662098,null,"662098 [Gene Symbol: LOC662098] [Locus Tag: TcasGA2_TC005530] [Chromosome: LG8] [Map Location: ] [Description: ATPase family AAA domain-containing protein 5] [Gene Type: protein-coding]","TcasGA2_TC005530; LOC662098"]
[1487,"NC_007423.3","11735212..11735213","MNV","TG","GA","Heterozygous",6,22,27.27,1,5,1,0.17,39.92,6,22,3,5,1.25,0.25,0.35,"no","complex","No",1,200,"XP_008196971.1:c.57_58delCAinsTC","XP_008196971.1:p.Asn20His","LOC662098",662098,null,"662098 [Gene Symbol: LOC662098] [Locus Tag: TcasGA2_TC005530] [Chromosome: LG8] [Map Location: ] [Description: ATPase family AAA domain-containing protein 5] [Gene Type: protein-coding]","TcasGA2_TC005530; LOC662098"]
[1488,"NC_007423.3",11741483,"SNV","A","G","Homozygous",24,24,100,1,19,8,0.3,37.79,27,27,15,18,null,1,1,"no","G/G","No",1,92.13,"XP_973378.1:c.139T>C","XP_973378.1:p.Tyr47His","LOC662168",662168,null,"662168 [Gene Symbol: LOC662168] [Locus Tag: TcasGA2_TC005528] [Chromosome: LG8] [Map Location: ] [Description: heat shock protein 27] [Gene Type: protein-coding]","LOC662168; TcasGA2_TC005528"]
[1489,"NC_007423.3",11972205,"SNV","G","T","Heterozygous",5,20,25,0.98,0,5,0,38.8,5,20,3,5,0.83,0.06,0.13,"no","G/T","No",1,17.35,"XP_001814021.1:c.115G>T","XP_001814021.1:p.Gly39Trp","LOC100141739",100141739,null,"100141739 [Gene Symbol: LOC100141739] [Locus Tag: TcasGA2_TC006612] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141739] [Gene Type: protein-coding]","LOC100141739; TcasGA2_TC006612"]
[1490,"NC_007423.3",12061250,"SNV","T","C","Heterozygous",16,20,80,0.86,10,7,0.41,39.19,17,22,11,14,-1.04,0.91,1,"no","C/T","No",1,8.67,"XP_008197174.1:c.1640T>C","XP_008197174.1:p.Ile547Thr","LOC100142521",100142521,null,"100142521 [Gene Symbol: LOC100142521] [Locus Tag: TcasGA2_TC034137] [Chromosome: LG8] [Map Location: ] [Description: E3 ubiquitin-protein ligase UHRF2-like] [Gene Type: protein-coding]","LOC100142521; TcasGA2_TC034137"]
[1491,"NC_007423.3",12061303,"SNV","A","G","Heterozygous",14,20,70,1,8,9,0.47,39.71,17,26,9,12,2.31,0.77,0.99,"no","A/G","No",1,23.7,"XP_008197174.1:c.1693A>G","XP_008197174.1:p.Ser565Gly","LOC100142521",100142521,null,"100142521 [Gene Symbol: LOC100142521] [Locus Tag: TcasGA2_TC034137] [Chromosome: LG8] [Map Location: ] [Description: E3 ubiquitin-protein ligase UHRF2-like] [Gene Type: protein-coding]","LOC100142521; TcasGA2_TC034137"]
[1492,"NC_007423.3",12092967,"SNV","T","C","Homozygous",21,21,100,1,6,17,0.26,37.52,23,23,12,15,null,1,1,"no","C/C","No",1,83.13,"XP_015838352.1:c.[859A>G]; XP_015838358.1:c.[392-4640T>C]","XP_015838352.1:p.Asn287Asp","LOC103314078, LOC103314076, LOC655790","103314078 , 103314076 , 655790",null,"103314078 [Gene Symbol: LOC103314078] [Locus Tag: TcasGA2_TC006627] [Chromosome: LG8] [Map Location: ] [Description: replication factor C subunit 5] [Gene Type: protein-coding] || 103314076 [Gene Symbol: LOC103314076] [Locus Tag: TcasGA2_TC005500] [Chromosome: LG8] [Map Location: ] [Description: carboxypeptidase M] [Gene Type: protein-coding] || 655790 [Gene Symbol: LOC655790] [Locus Tag: TcasGA2_TC005499] [Chromosome: LG8] [Map Location: ] [Description: esterase B1] [Gene Type: protein-coding]","LOC103314078; TcasGA2_TC006627 || LOC103314076; TcasGA2_TC005500 || LOC655790; TcasGA2_TC005499"]
[1493,"NC_007423.3",12148634,"SNV","C","A","Homozygous",22,22,100,1,6,16,0.27,38.82,22,22,13,17,null,1,1,"no","A/A","No",1,87.7,"XP_015838376.1:c.[1347C>A]; XP_008197191.1:c.[1500C>A]; XP_001809051.1:c.[1416C>A]","XP_015838376.1:p.[Asp449Glu]; XP_008197191.1:p.[Asp500Glu]; XP_001809051.1:p.[Asp472Glu]","LOC100142465",100142465,null,"100142465 [Gene Symbol: LOC100142465] [Locus Tag: TcasGA2_TC006631] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC100142465; TcasGA2_TC006631"]
[1494,"NC_007423.3",12153220,"SNV","T","C","Homozygous",23,23,100,1,14,13,0.48,37.35,27,27,13,17,null,1,1,"no","C/C","No",1,89.14,"XP_015838377.1:c.[871A>G]; XP_008197194.1:c.[874A>G]; XP_015838378.1:c.[835A>G]","XP_015838377.1:p.[Ile291Val]; XP_008197194.1:p.[Ile292Val]; XP_015838378.1:p.[Ile279Val]","LOC656872",656872,null,"656872 [Gene Symbol: LOC656872] [Locus Tag: TcasGA2_TC005491] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC656872; TcasGA2_TC005491"]
[1495,"NC_007423.3",12153315,"SNV","A","C","Heterozygous",10,21,47.62,1,6,4,0.4,37.7,10,21,4,5,0.25,0.8,1,"no","A/C","No",1,81.96,"XP_015838378.1:c.[749-9T>G]; XP_008197194.1:c.[779T>G]; XP_015838377.1:c.[776T>G]","XP_008197194.1:p.[Val260Gly]; XP_015838377.1:p.[Val259Gly]","LOC656872",656872,null,"656872 [Gene Symbol: LOC656872] [Locus Tag: TcasGA2_TC005491] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC656872; TcasGA2_TC005491"]
[1496,"NC_007423.3",12153323,"SNV","A","T","Heterozygous",10,22,45.45,1,6,4,0.4,37.2,10,22,6,6,0.4,0.35,1,"no","A/T","No",1,78.98,"XP_015838377.1:c.[768T>A]; XP_015838378.1:c.[749-17T>A]; XP_008197194.1:c.[771T>A]","XP_015838377.1:p.[Cys256*]; XP_008197194.1:p.[Cys257*]","LOC656872",656872,null,"656872 [Gene Symbol: LOC656872] [Locus Tag: TcasGA2_TC005491] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC656872; TcasGA2_TC005491"]
[1497,"NC_007423.3",12153334,"SNV","G","T","Heterozygous",9,20,45,1,6,3,0.33,38.22,9,20,5,5,-0.8,0.1,0.84,"no","G/T","No",1,68.34,"XP_015838378.1:c.[748+12C>A]; XP_015838377.1:c.[757C>A]; XP_008197194.1:c.[760C>A]","XP_015838377.1:p.[Arg253Ser]; XP_008197194.1:p.[Arg254Ser]","LOC656872",656872,null,"656872 [Gene Symbol: LOC656872] [Locus Tag: TcasGA2_TC005491] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC656872; TcasGA2_TC005491"]
[1498,"NC_007423.3",12164366,"SNV","T","C","Homozygous",21,21,100,1,17,7,0.29,38.71,24,24,10,17,null,1,1,"no","C/C","No",1,83.12,"XP_968772.1:c.37T>C","XP_968772.1:p.Ser13Pro","LOC657120, LOC657208","657120 , 657208",null,"657120 [Gene Symbol: LOC657120] [Locus Tag: TcasGA2_TC005490] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding] || 657208 [Gene Symbol: LOC657208] [Locus Tag: TcasGA2_TC006634] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC657120; TcasGA2_TC005490 || LOC657208; TcasGA2_TC006634"]
[1499,"NC_007423.3",12164405,"SNV","C","T","Heterozygous",8,22,36.36,1,2,7,0.22,36.5,9,23,5,7,2.08,0.4,0.68,"no","C/T","No",1,53.39,"XP_968772.1:c.76C>T","XP_968772.1:p.His26Tyr","LOC657120, LOC657208","657120 , 657208",null,"657120 [Gene Symbol: LOC657120] [Locus Tag: TcasGA2_TC005490] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding] || 657208 [Gene Symbol: LOC657208] [Locus Tag: TcasGA2_TC006634] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC657120; TcasGA2_TC005490 || LOC657208; TcasGA2_TC006634"]
[1500,"NC_007423.3",12234011,"SNV","C","T","Heterozygous",5,20,25,0.99,1,4,0.2,39.8,5,20,3,2,1,0.71,0.37,"no","C/T","No",1,20.78,"XP_008197222.1:c.790G>A","XP_008197222.1:p.Ala264Thr","LOC657902",657902,null,"657902 [Gene Symbol: LOC657902] [Locus Tag: TcasGA2_TC005485] [Chromosome: LG8] [Map Location: ] [Description: dynein heavy chain 3, axonemal] [Gene Type: protein-coding]","LOC657902; TcasGA2_TC005485"]
[1501,"NC_007423.3",12785539,"SNV","C","G","Homozygous",23,23,100,1,7,17,0.29,38.57,24,24,11,17,null,1,1,"no","G/G","No",1,89.12,"XP_015838373.1:c.[2640G>C]; XP_015838370.1:c.[2637G>C]; XP_015838367.1:c.[2640G>C]; XP_015838371.1:c.[2589G>C]; XP_015838369.1:c.[2640G>C]; XP_008197261.1:c.[2616G>C]; XP_015838372.1:c.[2586G>C]","XP_015838373.1:p.[Lys880Asn]; XP_015838370.1:p.[Lys879Asn]; XP_015838367.1:p.[Lys880Asn]; XP_015838371.1:p.[Lys863Asn]; XP_015838369.1:p.[Lys880Asn]; XP_008197261.1:p.[Lys872Asn]; XP_015838372.1:p.[Lys862Asn]","LOC661858",661858,null,"661858 [Gene Symbol: LOC661858] [Locus Tag: TcasGA2_TC005459] [Chromosome: LG8] [Map Location: ] [Description: prominin-like protein] [Gene Type: protein-coding]","LOC661858; TcasGA2_TC005459"]
[1502,"NC_007423.3",12844706,"SNV","G","C","Heterozygous",6,22,27.27,1,5,3,0.38,34,8,29,4,6,-1.33,0.2,1,"no","C/G","No",1,27.73,"XP_015838318.1:c.2168G>C","XP_015838318.1:p.Ser723Thr","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1503,"NC_007423.3",12845660,"SNV","G","A","Heterozygous",8,20,40,1,4,5,0.44,39.25,9,21,6,6,-0.42,0.82,1,"no","A/G","No",1,59.03,"XP_015838318.1:c.3122G>A","XP_015838318.1:p.Ser1041Asn","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1504,"NC_007423.3",12846184,"SNV","C","T","Heterozygous",13,23,56.52,1,8,7,0.47,38.54,15,25,9,8,-0.25,0.86,0.87,"no","C/T","No",1,77.38,"XP_015838318.1:c.3646C>T","XP_015838318.1:p.Leu1216Phe","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1505,"NC_007423.3","12846191..12846193","MNV","CCA","AGG","Heterozygous",13,23,56.52,1,8,7,0.47,38,15,25,11,9,0.08,0.85,0.87,"no","complex","No",1,200,"XP_015838318.1:c.3653_3655delCCAinsAGG","XP_015838318.1:p.Thr1218_Ser1219delinsLysGly","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1506,"NC_007423.3",12848041,"SNV","A","G","Heterozygous",15,24,62.5,1,12,7,0.37,37,19,28,6,8,-1.22,0.85,1,"no","A/G","No",1,60.68,"XP_015838318.1:c.4570A>G","XP_015838318.1:p.Ser1524Gly","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1507,"NC_007423.3",12848072,"SNV","A","T","Heterozygous",11,22,50,1,7,6,0.46,37,13,24,6,6,0.16,0.36,0.98,"no","A/T","No",1,88.68,"XP_015838318.1:c.4601A>T","XP_015838318.1:p.Glu1534Val","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1508,"NC_007423.3",12848078,"SNV","C","G","Homozygous",23,23,100,1,12,14,0.46,36.74,26,26,12,15,null,1,1,"no","G/G","No",1,89.12,"XP_015838318.1:c.4607C>G","XP_015838318.1:p.Pro1536Arg","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1509,"NC_007423.3",12848261,"SNV","C","T","Heterozygous",16,21,76.19,0.99,8,9,0.47,36.94,17,22,8,8,-0.58,0.94,0.99,"no","C/T","No",1,19.21,"XP_015838318.1:c.4790C>T","XP_015838318.1:p.Thr1597Ile","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1510,"NC_007423.3","12848327..12848328","MNV","GC","CT","Heterozygous",16,24,66.67,1,12,9,0.43,37.09,21,30,13,11,-0.97,0.74,0.99,"no","complex","No",1,200,"XP_015838318.1:c.4856_4857delGCinsCT","XP_015838318.1:p.Gly1619Ala","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1511,"NC_007423.3",12848332,"SNV","T","A","Homozygous",24,24,100,1,14,15,0.48,35.92,29,29,15,14,null,1,1,"no","A/A","No",1,93.71,"XP_015838318.1:c.4861T>A","XP_015838318.1:p.Tyr1621Asn","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1512,"NC_007423.3",12850114,"SNV","G","A","Heterozygous",12,31,38.71,1,4,8,0.33,39.42,12,33,4,8,2.51,0.53,0.41,"no","A/G","No",1,79.39,"XP_015838318.1:c.6643G>A","XP_015838318.1:p.Glu2215Lys","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1513,"NC_007423.3","12899500..12899501","MNV","CT","TG","Homozygous",18,21,85.71,1,18,0,0,37.78,18,21,10,11,null,0.8,0.68,"no","TG/TG","No",1,200,"XP_973645.1:c.[408_409delCTinsTG]; XP_008197270.1:c.[408_409delCTinsTG]","XP_973645.1:p.[Leu137Val]; XP_008197270.1:p.[Leu137Val]","LOC662458",662458,null,"662458 [Gene Symbol: LOC662458] [Locus Tag: TcasGA2_TC006689] [Chromosome: LG8] [Map Location: ] [Description: sesquipedalian-1] [Gene Type: protein-coding]","LOC662458; TcasGA2_TC006689"]
[1514,"NC_007423.3",12933125,"SNV","A","G","Heterozygous",9,27,33.33,1,6,3,0.33,34.89,9,32,2,4,-2.67,0.46,0.81,"no","A/G","No",1,53.34,"XP_973709.1:c.200A>G","XP_973709.1:p.Asn67Ser","LOC662525",662525,null,"662525 [Gene Symbol: LOC662525] [Locus Tag: TcasGA2_TC006690] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC662525] [Gene Type: protein-coding]","TcasGA2_TC006690; LOC662525"]
[1515,"NC_007423.3",13065194,"SNV","C","T","Heterozygous",14,20,70,1,5,9,0.36,35.57,14,20,9,8,-2.97,0.86,1,"no","C/T","No",1,34.68,"XP_973952.1:c.[563C>T]; XP_015838405.1:c.[563C>T]","XP_973952.1:p.[Ala188Val]; XP_015838405.1:p.[Ala188Val]","LOC662782",662782,null,"662782 [Gene Symbol: LOC662782] [Locus Tag: TcasGA2_TC006699] [Chromosome: LG8] [Map Location: ] [Description: trehalase] [Gene Type: protein-coding]","LOC662782; TcasGA2_TC006699"]
[1516,"NC_007423.3",13065196,"SNV","T","C","Heterozygous",6,20,30,1,3,3,0.5,39.5,6,20,3,5,2.47,0.3,0.97,"no","C/T","No",1,34.67,"XP_973952.1:c.[565T>C]; XP_015838405.1:c.[565T>C]","XP_973952.1:p.[Phe189Leu]; XP_015838405.1:p.[Phe189Leu]","LOC662782",662782,null,"662782 [Gene Symbol: LOC662782] [Locus Tag: TcasGA2_TC006699] [Chromosome: LG8] [Map Location: ] [Description: trehalase] [Gene Type: protein-coding]","LOC662782; TcasGA2_TC006699"]
[1517,"NC_007423.3",13149390,"SNV","T","C","Heterozygous",8,22,36.36,1,0,8,0,36.5,8,23,3,2,-0.61,0.15,0.29,"no","C/T","No",1,54.66,"XP_974236.1:c.761T>C","XP_974236.1:p.Phe254Ser","LOC663082",663082,null,"663082 [Gene Symbol: LOC663082] [Locus Tag: TcasGA2_TC006708] [Chromosome: LG8] [Map Location: ] [Description: ATP-sensitive inward rectifier potassium channel 11] [Gene Type: protein-coding]","TcasGA2_TC006708; LOC663082"]
[1518,"NC_007423.3",13155949,"SNV","C","T","Heterozygous",8,20,40,1,5,3,0.38,36,8,21,5,4,-2.31,0.63,0.96,"no","C/T","No",1,58.95,"XP_974289.1:c.650G>A","XP_974289.1:p.Ser217Asn","LOC663136",663136,null,"663136 [Gene Symbol: LOC663136] [Locus Tag: TcasGA2_TC005442] [Chromosome: LG8] [Map Location: ] [Description: putative inorganic phosphate cotransporter] [Gene Type: protein-coding]","TcasGA2_TC005442; LOC663136"]
[1519,"NC_007423.3",13158474,"SNV","T","C","Heterozygous",8,20,40,1,8,0,0,38.12,8,23,5,5,0.19,0.48,0.53,"no","C/T","No",1,60.19,"XP_015838419.1:c.334A>G","XP_015838419.1:p.Ile112Val","LOC663162",663162,null,"663162 [Gene Symbol: LOC663162] [Locus Tag: TcasGA2_TC005441] [Chromosome: LG8] [Map Location: ] [Description: putative inorganic phosphate cotransporter] [Gene Type: protein-coding]","LOC663162; TcasGA2_TC005441"]
[1520,"NC_007423.3",13184815,"SNV","C","A","Homozygous",26,29,89.66,1,14,17,0.45,36.69,31,35,16,14,null,1,1,"no","A/A","No",1,29.21,"XP_015838433.1:c.[787C>A]; XP_974486.2:c.[787C>A]","XP_015838433.1:p.[Leu263Ile]; XP_974486.2:p.[Leu263Ile]","LOC663341",663341,null,"663341 [Gene Symbol: LOC663341] [Locus Tag: TcasGA2_TC006711] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: coiled-coil domain-containing protein 65] [Gene Type: protein-coding]","LOC663341; TcasGA2_TC006711"]
[1521,"NC_007423.3",13221041,"SNV","G","C","Heterozygous",10,24,41.67,1,7,4,0.36,37.1,11,31,5,8,0.97,0.27,0.96,"no","C/G","No",1,73.3,"XP_015838504.1:c.[878C>G]; XP_015838508.1:c.[13-2896G>C]","XP_015838504.1:p.Ala293Gly","LOC655221, LOC655077","655221 , 655077",null,"655221 [Gene Symbol: LOC655221] [Locus Tag: TcasGA2_TC006713] [Chromosome: LG8] [Map Location: ] [Description: protein yippee-like 2] [Gene Type: protein-coding] || 655077 [Gene Symbol: LOC655077] [Locus Tag: TcasGA2_TC005432] [Chromosome: LG8] [Map Location: ] [Description: cathepsin B precursor] [Gene Type: protein-coding]","LOC655221; TcasGA2_TC006713 || LOC655077; TcasGA2_TC005432"]
[1522,"NC_007423.3",13241221,"SNV","T","G","Homozygous",26,26,100,1,14,15,0.48,37.92,29,29,9,17,null,1,1,"no","G/G","No",1,98.15,"XP_015838506.1:c.[164A>C]; XP_015838507.1:c.[164A>C]","XP_015838506.1:p.[Gln55Pro]; XP_015838507.1:p.[Gln55Pro]","LOC107398576",107398576,null,"107398576 [Gene Symbol: LOC107398576] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398576] [Gene Type: protein-coding]","LOC107398576"]
[1523,"NC_007423.3",13241231,"SNV","C","G","Heterozygous",18,36,50,1,11,10,0.48,37.5,21,41,7,13,0.95,0.89,0.99,"no","C/G","No",1,139.05,"XP_015838506.1:c.[154G>C]; XP_015838507.1:c.[154G>C]","XP_015838506.1:p.[Glu52Gln]; XP_015838507.1:p.[Glu52Gln]","LOC107398576",107398576,null,"107398576 [Gene Symbol: LOC107398576] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398576] [Gene Type: protein-coding]","LOC107398576"]
[1524,"NC_007423.3",13241237,"SNV","G","C","Heterozygous",18,33,54.55,1,11,10,0.48,38.28,21,39,7,13,0.85,0.9,1,"no","C/G","No",1,112.16,"XP_015838507.1:c.[148C>G]; XP_015838506.1:c.[148C>G]","XP_015838507.1:p.[Gln50Glu]; XP_015838506.1:p.[Gln50Glu]","LOC107398576",107398576,null,"107398576 [Gene Symbol: LOC107398576] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398576] [Gene Type: protein-coding]","LOC107398576"]
[1525,"NC_007423.3",13336721,"SNV","C","A","Homozygous",17,20,85,0.72,16,1,0.06,35.59,17,20,7,9,null,0.89,1,"no","A/A","No",1,5.53,"XP_967682.1:c.219C>A","XP_967682.1:p.Asp73Glu","LOC100216359, LOC656034","100216359 , 656034","allatotropin II preprohormone","100216359 [Gene Symbol: LOC100216359] [Locus Tag: TcasGA2_TC005428] [Chromosome: LG8] [Map Location: ] [Description: allatotropin II preprohormone] [Gene Type: protein-coding] || 656034 [Gene Symbol: LOC656034] [Locus Tag: TcasGA2_TC006719] [Chromosome: LG8] [Map Location: ] [Description: calpain-7] [Gene Type: protein-coding]","LOC100216359; Ast-C; TcasGA2_TC005428 || LOC656034; TcasGA2_TC006719"]
[1526,"NC_007423.3","13349798..13349799","MNV","GA","AG","Heterozygous",16,20,80,1,13,4,0.24,38.88,17,22,9,13,1.94,0.45,1,"no","complex","No",1,200,"XP_015838445.1:c.1819_1820delGAinsAG","XP_015838445.1:p.Glu607Arg","LOC656371",656371,null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721"]
[1527,"NC_007423.3",13349852,"SNV","A","G","Homozygous",27,27,100,1,16,16,0.5,37.59,32,32,13,17,null,1,1,"no","G/G","No",1,101.16,"XP_015838445.1:c.1873A>G","XP_015838445.1:p.Lys625Glu","LOC656371",656371,null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721"]
[1528,"NC_007423.3",13349867,"SNV","G","A","Heterozygous",18,29,62.07,1,7,13,0.35,39.17,20,32,8,10,2.16,1,0.99,"no","A/G","No",1,73.29,"XP_015838445.1:c.1888G>A","XP_015838445.1:p.Glu630Lys","LOC656371",656371,null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721"]
[1529,"NC_007423.3",13351277,"SNV","G","A","Heterozygous",7,20,35,1,6,3,0.33,38.43,9,26,5,6,0.16,0.64,0.91,"no","A/G","No",1,46.38,"XP_015838445.1:c.3259G>A","XP_015838445.1:p.Asp1087Asn","LOC656371",656371,null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721"]
[1530,"NC_007423.3",13352988,"SNV","C","G","Heterozygous",5,21,23.81,0.98,5,0,0,40,5,22,3,4,2.02,0.17,0.43,"no","C/G","No",1,17.89,"XP_015838445.1:c.4700C>G","XP_015838445.1:p.Ala1567Gly","LOC656371",656371,null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721"]
[1531,"NC_007423.3","13356985^13356986","Insertion","-","A","Heterozygous",8,24,33.33,1,2,7,0.22,38.75,9,27,5,5,0.89,0.87,1,"no","-/A","Yes",6,48.47,"XP_015838445.1:c.5450_5451insA","XP_015838445.1:p.Ser1820fs","LOC656371, LOC656455","656371 , 656455",null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding] || 656455 [Gene Symbol: LOC656455] [Locus Tag: TcasGA2_TC006723] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656455] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721 || TcasGA2_TC006723; LOC656455"]
[1532,"NC_007423.3","13424634^13424635","Insertion","-","AG","Homozygous",20,20,100,1,12,11,0.48,37.45,23,23,13,14,null,1,1,"no","AG/AG","No",1,200,"XP_015838512.1:c.3366_3367insAG","XP_015838512.1:p.Leu1123fs","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1533,"NC_007423.3","13424637..13424638","MNV","GC","CA","Homozygous",21,21,100,1,13,11,0.46,36.71,24,24,14,14,null,1,1,"no","CA/CA","No",1,200,"XP_015838512.1:c.3369_3370delGCinsCA","XP_015838512.1:p.Leu1123_Pro1124delinsPheThr","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1534,"NC_007423.3",13425601,"SNV","A","G","Homozygous",33,33,100,1,20,19,0.49,37.58,39,39,19,24,null,1,1,"no","G/G","No",1,116.2,"XP_015838512.1:c.4333A>G","XP_015838512.1:p.Asn1445Asp","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1535,"NC_007423.3",13428788,"SNV","G","A","Homozygous",20,23,86.96,0.94,15,12,0.44,37.85,27,30,12,15,null,0.93,1,"no","A/A","No",1,12.36,"XP_015838512.1:c.7520G>A","XP_015838512.1:p.Ser2507Asn","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1536,"NC_007423.3",13430745,"SNV","T","C","Heterozygous",20,25,80,0.83,7,17,0.29,36.8,24,29,12,16,-1.36,0.93,0.99,"no","C/T","No",1,7.64,"XP_015838512.1:c.9269T>C","XP_015838512.1:p.Val3090Ala","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1537,"NC_007423.3",13430940,"SNV","G","C","Homozygous",25,25,100,1,18,12,0.4,38.88,30,30,13,17,null,1,1,"no","C/C","No",1,92.15,"XP_015838512.1:c.9464G>C","XP_015838512.1:p.Ser3155Thr","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1538,"NC_007423.3",13430946,"SNV","A","G","Homozygous",25,25,100,1,15,15,0.5,38.48,30,30,13,17,null,1,1,"no","G/G","No",1,95.14,"XP_015838512.1:c.9470A>G","XP_015838512.1:p.Gln3157Arg","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1539,"NC_007423.3",13431132,"SNV","T","C","Homozygous",20,20,100,1,9,11,0.45,37.05,20,20,13,17,null,1,1,"no","C/C","No",1,80.11,"XP_015838512.1:c.9656T>C","XP_015838512.1:p.Leu3219Pro","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1540,"NC_007423.3",13433004,"SNV","G","A","Heterozygous",9,24,37.5,1,3,6,0.33,37.11,9,26,6,8,-1.61,0.58,0.82,"no","A/G","No",1,60.72,"XP_015838512.1:c.11528G>A","XP_015838512.1:p.Gly3843Glu","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1541,"NC_007423.3",13433034,"SNV","C","T","Homozygous",20,20,100,1,9,12,0.43,37.9,21,21,12,15,null,1,1,"no","T/T","No",1,81.69,"XP_015838512.1:c.11558C>T","XP_015838512.1:p.Thr3853Ile","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1542,"NC_007423.3",13436424,"SNV","G","A","Heterozygous",5,20,25,0.99,0,5,0,34.6,5,20,3,4,-2.75,0.12,0.18,"no","A/G","No",1,20.92,"XP_015838512.1:c.14798G>A","XP_015838512.1:p.Trp4933*","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1543,"NC_007423.3",13436812,"SNV","T","C","Homozygous",27,27,100,1,7,24,0.23,38.04,31,31,13,17,null,1,1,"no","C/C","No",1,101.18,"XP_015838512.1:c.15101T>C","XP_015838512.1:p.Val5034Ala","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1544,"NC_007423.3",13454682,"SNV","G","A","Homozygous",22,22,100,1,15,9,0.38,38.32,24,24,10,14,null,1,1,"no","A/A","No",1,87.7,"XP_968843.1:c.347C>T","XP_968843.1:p.Thr116Ile","LOC657282",657282,null,"657282 [Gene Symbol: LOC657282] [Locus Tag: TcasGA2_TC005420] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat domain-containing protein 27] [Gene Type: protein-coding]","TcasGA2_TC005420; LOC657282"]
[1545,"NC_007423.3",13478650,"SNV","G","A","Homozygous",20,20,100,1,6,16,0.27,35.85,22,22,9,11,null,1,1,"no","A/A","No",1,81.69,"XP_001810958.1:c.1138C>T","XP_001810958.1:p.Pro380Ser","LOC657358",657358,null,"657358 [Gene Symbol: LOC657358] [Locus Tag: TcasGA2_TC005418] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657358] [Gene Type: protein-coding]","LOC657358; TcasGA2_TC005418"]
[1546,"NC_007423.3",13502913,"SNV","A","C","Heterozygous",5,22,22.73,0.97,5,5,0.5,37.8,10,27,3,4,-0.16,0.12,0.66,"no","A/C","No",1,15.98,"XP_008197517.1:c.993A>C","XP_008197517.1:p.Lys331Asn","LOC657358, LOC657513","657358 , 657513",null,"657358 [Gene Symbol: LOC657358] [Locus Tag: TcasGA2_TC005418] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657358] [Gene Type: protein-coding] || 657513 [Gene Symbol: LOC657513] [Locus Tag: TcasGA2_TC006733] [Chromosome: LG8] [Map Location: ] [Description: cholinesterase 1] [Gene Type: protein-coding]","LOC657358; TcasGA2_TC005418 || TcasGA2_TC006733; LOC657513"]
[1547,"NC_007423.3","13516699..13516700","MNV","TC","GT","Homozygous",25,25,100,1,14,14,0.5,38.29,28,28,13,18,null,1,1,"no","GT/GT","No",1,200,"XP_969353.1:c.1215_1216delGAinsAC","XP_969353.1:p.Lys406Gln","LOC657825",657825,null,"657825 [Gene Symbol: LOC657825] [Locus Tag: TcasGA2_TC005412] [Chromosome: LG8] [Map Location: ] [Description: beta-glucuronidase] [Gene Type: protein-coding]","LOC657825; TcasGA2_TC005412"]
[1548,"NC_007423.3",13580666,"SNV","C","G","Heterozygous",8,20,40,1,5,3,0.38,39,8,20,2,7,-1.16,0.31,0.83,"no","C/G","No",1,58.92,"NP_001104011.1:c.1034G>C","NP_001104011.1:p.Gly345Ala","Cda3",658524,"chitin deacetylase 3","658524 [Gene Symbol: Cda3] [Locus Tag: TcasGA2_TC005409] [Chromosome: LG8] [Map Location: ] [Description: chitin deacetylase 3] [Gene Type: protein-coding]","Cda3; TcasGA2_TC005409"]
[1549,"NC_007423.3",13581293,"SNV","C","G","Heterozygous",5,20,25,0.99,2,3,0.4,36.4,5,23,4,3,0.74,0.29,0.96,"no","C/G","No",1,20.66,"NP_001104011.1:c.451G>C","NP_001104011.1:p.Glu151Gln","Cda3",658524,"chitin deacetylase 3","658524 [Gene Symbol: Cda3] [Locus Tag: TcasGA2_TC005409] [Chromosome: LG8] [Map Location: ] [Description: chitin deacetylase 3] [Gene Type: protein-coding]","Cda3; TcasGA2_TC005409"]
[1550,"NC_007423.3","13687911..13687912","MNV","GT","AA","Homozygous",20,20,100,1,13,8,0.38,36.95,21,21,12,15,null,1,1,"no","AA/AA","No",1,200,"XP_970680.1:c.779_780delGTinsAA","XP_970680.1:p.Ser260Lys","LOC659262",659262,null,"659262 [Gene Symbol: LOC659262] [Locus Tag: TcasGA2_TC006746] [Chromosome: LG8] [Map Location: ] [Description: deoxyhypusine hydroxylase] [Gene Type: protein-coding]","TcasGA2_TC006746; LOC659262"]
[1551,"NC_007423.3","13719752..13719753","MNV","AA","TG","Homozygous",17,20,85,1,2,15,0.12,38.35,17,20,10,10,null,0.92,1,"no","TG/TG","No",1,200,"XP_971048.1:c.920_921delAAinsTG","XP_971048.1:p.Gln307Leu","LOC659669",659669,null,"659669 [Gene Symbol: LOC659669] [Locus Tag: TcasGA2_TC006751] [Chromosome: LG8] [Map Location: ] [Description: protein penguin] [Gene Type: protein-coding]","LOC659669; TcasGA2_TC006751"]
[1552,"NC_007423.3",13722252,"SNV","T","G","Homozygous",22,22,100,1,13,17,0.43,36.36,30,30,7,14,null,1,1,"no","G/G","No",1,86.11,"XP_971109.1:c.413A>C","XP_971109.1:p.Asn138Thr","LOC659739",659739,null,"659739 [Gene Symbol: LOC659739] [Locus Tag: TcasGA2_TC005401] [Chromosome: LG8] [Map Location: ] [Description: synaptogyrin-1] [Gene Type: protein-coding]","LOC659739; TcasGA2_TC005401"]
[1553,"NC_007423.3",13797331,"SNV","C","T","Homozygous",19,20,95,1,13,13,0.5,37.05,26,28,8,13,null,0.99,1,"no","T/T","No",1,49.64,"XP_008197393.1:c.272C>T","XP_008197393.1:p.Ala91Val","LOC103314128",103314128,null,"103314128 [Gene Symbol: LOC103314128] [Locus Tag: TcasGA2_TC006757] [Chromosome: LG8] [Map Location: ] [Description: zinc finger protein 43] [Gene Type: protein-coding]","TcasGA2_TC006757; LOC103314128"]
[1554,"NC_007423.3",13806581,"SNV","A","G","Homozygous",26,26,100,1,17,13,0.43,36.73,30,30,13,17,null,1,1,"no","G/G","No",1,98.14,"XP_015838457.1:c.1339T>C","XP_015838457.1:p.Cys447Arg","LOC660438",660438,null,"660438 [Gene Symbol: LOC660438] [Locus Tag: TcasGA2_TC005396] [Chromosome: LG8] [Map Location: ] [Description: dynein assembly factor 5, axonemal] [Gene Type: protein-coding]","TcasGA2_TC005396; LOC660438"]
[1555,"NC_007423.3",13806593,"SNV","G","A","Homozygous",25,25,100,1,16,11,0.41,37.6,27,27,13,18,null,1,1,"no","A/A","No",1,96.73,"XP_015838457.1:c.1327C>T","XP_015838457.1:p.His443Tyr","LOC660438",660438,null,"660438 [Gene Symbol: LOC660438] [Locus Tag: TcasGA2_TC005396] [Chromosome: LG8] [Map Location: ] [Description: dynein assembly factor 5, axonemal] [Gene Type: protein-coding]","TcasGA2_TC005396; LOC660438"]
[1556,"NC_007423.3",13808577,"SNV","G","A","Homozygous",20,24,83.33,0.62,4,19,0.17,36.25,23,28,8,11,-1.55,0.7,1,"no","A/A","No",1,4.2,"XP_971820.1:c.[265G>A]; XP_015838465.1:c.[265G>A]","XP_971820.1:p.[Asp89Asn]; XP_015838465.1:p.[Asp89Asn]","LOC660500",660500,null,"660500 [Gene Symbol: LOC660500] [Locus Tag: TcasGA2_TC006759] [Chromosome: LG8] [Map Location: ] [Description: diphthine methyltransferase] [Gene Type: protein-coding]","TcasGA2_TC006759; LOC660500"]
[1557,"NC_007423.3",13914762,"SNV","A","C","Heterozygous",14,22,63.64,1,5,11,0.31,36.21,16,24,7,6,-1.43,0.57,0.53,"no","A/C","No",1,49.83,"XP_015838498.1:c.[117-10245T>G]; XP_015838497.1:c.[117-10245T>G]; XP_015838501.1:c.[117-10245T>G]; XP_015838499.1:c.[117-10245T>G]; XP_008197522.1:c.[525A>C]; XP_015838500.1:c.[117-10245T>G]","XP_008197522.1:p.Glu175Asp","LOC661343, LOC103314157","661343 , 103314157",null,"661343 [Gene Symbol: LOC661343] [Locus Tag: TcasGA2_TC005383] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat and fibronectin type-III domain-containing protein 1] [Gene Type: protein-coding] || 103314157 [Gene Symbol: LOC103314157] [Locus Tag: TcasGA2_TC006768] [Chromosome: LG8] [Map Location: ] [Description: protein CROWDED NUCLEI 2] [Gene Type: protein-coding]","LOC661343; TcasGA2_TC005383 || LOC103314157; TcasGA2_TC006768"]
[1558,"NC_007423.3","13914766..13914771","Deletion","AATGAC","-","Heterozygous",14,24,58.33,1,5,11,0.31,37.43,16,26,8,8,1.05,0.76,0.68,"no","complex","No",1,200,"XP_008197522.1:c.[529_534delAATGAC]; XP_015838497.1:c.[117-10254_117-10249delGTCATT]; XP_015838498.1:c.[117-10254_117-10249delGTCATT]; XP_015838499.1:c.[117-10254_117-10249delGTCATT]; XP_015838501.1:c.[117-10254_117-10249delGTCATT]; XP_015838500.1:c.[117-10254_117-10249delGTCATT]","XP_008197522.1:p.Asn177_Asp178del","LOC661343, LOC103314157","661343 , 103314157",null,"661343 [Gene Symbol: LOC661343] [Locus Tag: TcasGA2_TC005383] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat and fibronectin type-III domain-containing protein 1] [Gene Type: protein-coding] || 103314157 [Gene Symbol: LOC103314157] [Locus Tag: TcasGA2_TC006768] [Chromosome: LG8] [Map Location: ] [Description: protein CROWDED NUCLEI 2] [Gene Type: protein-coding]","LOC661343; TcasGA2_TC005383 || LOC103314157; TcasGA2_TC006768"]
[1559,"NC_007423.3",13916167,"SNV","G","C","Heterozygous",13,20,65,1,5,8,0.38,37.54,13,21,6,8,-0.79,0.83,1,"no","C/G","No",1,46.16,"XP_015838497.1:c.[117-11650C>G]; XP_015838499.1:c.[117-11650C>G]; XP_008197522.1:c.[1930G>C]; XP_015838501.1:c.[117-11650C>G]; XP_015838500.1:c.[117-11650C>G]; XP_015838498.1:c.[117-11650C>G]","XP_008197522.1:p.Glu644Gln","LOC661343, LOC103314157","661343 , 103314157",null,"661343 [Gene Symbol: LOC661343] [Locus Tag: TcasGA2_TC005383] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat and fibronectin type-III domain-containing protein 1] [Gene Type: protein-coding] || 103314157 [Gene Symbol: LOC103314157] [Locus Tag: TcasGA2_TC006768] [Chromosome: LG8] [Map Location: ] [Description: protein CROWDED NUCLEI 2] [Gene Type: protein-coding]","LOC661343; TcasGA2_TC005383 || LOC103314157; TcasGA2_TC006768"]
[1560,"NC_007423.3",13972005,"SNV","C","T","Homozygous",22,22,100,1,9,14,0.39,37.45,23,23,15,13,null,1,1,"no","T/T","No",1,87.72,"XP_015838539.1:c.[361C>T]; XP_015838540.1:c.[361C>T]","XP_015838539.1:p.[Leu121Phe]; XP_015838540.1:p.[Leu121Phe]","LOC107398578",107398578,null,"107398578 [Gene Symbol: LOC107398578] [Locus Tag: TcasGA2_TC006770] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398578] [Gene Type: protein-coding]","TcasGA2_TC006770; LOC107398578; Or229"]
[1561,"NC_007423.3",14145383,"SNV","C","T","Homozygous",22,22,100,1,17,7,0.29,38.64,24,24,11,14,null,1,1,"no","T/T","No",1,87.71,"XP_015838484.1:c.[267-2267G>A]; XP_015838492.1:c.[1119+5441G>A]; XP_015838486.1:c.[1522C>T]; XP_015838485.1:c.[267-2267G>A]; XP_008197523.2:c.[1528C>T]; XP_008197435.1:c.[267-2267G>A]; XP_015838483.1:c.[267-2267G>A]","XP_015838486.1:p.[Pro508Ser]; XP_008197523.2:p.[Pro510Ser]","LOC662422, LOC100142582, LOC103314138","662422 , 100142582 , 103314138",null,"662422 [Gene Symbol: LOC662422] [Locus Tag: TcasGA2_TC006777] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat domain-containing protein 6] [Gene Type: protein-coding] || 100142582 [Gene Symbol: LOC100142582] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: cytochrome P450 9e2] [Gene Type: protein-coding] || 103314138 [Gene Symbol: LOC103314138] [Locus Tag: TcasGA2_TC005348] [Chromosome: LG8] [Map Location: ] [Description: voltage-dependent T-type calcium channel subunit alpha-1G] [Gene Type: protein-coding]","LOC662422; TcasGA2_TC006777 || LOC100142582 || TcasGA2_TC005348; LOC103314138"]
[1562,"NC_007423.3",14243049,"SNV","C","G","Heterozygous",5,21,23.81,0.98,5,0,0,38.8,5,24,3,4,0.91,{"v":0.00899,"d":"8.99E-03"},0.04,"no","C/G","No",1,17.89,"XP_008197443.1:c.[1318C>G]; XP_974029.2:c.[1489C>G]; XP_008197442.1:c.[1489C>G]; XP_015838515.1:c.[1339C>G]","XP_008197443.1:p.[Leu440Val]; XP_974029.2:p.[Leu497Val]; XP_008197442.1:p.[Leu497Val]; XP_015838515.1:p.[Leu447Val]","LOC662860",662860,null,"662860 [Gene Symbol: LOC662860] [Locus Tag: TcasGA2_TC006784] [Chromosome: LG8] [Map Location: ] [Description: rho GTPase-activating protein 20] [Gene Type: protein-coding]","LOC662860; TcasGA2_TC006784"]
[1563,"NC_007424.3",22559,"SNV","G","A","Heterozygous",18,24,75,1,8,10,0.44,38.94,18,24,8,12,1.53,0.82,0.91,"no","A/G","No",1,23.44,"XP_967094.1:c.122C>T","XP_967094.1:p.Ser41Phe","LOC655457",655457,null,"655457 [Gene Symbol: LOC655457] [Locus Tag: TcasGA2_TC012232] [Chromosome: LG9] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC012232; LOC655457"]
[1564,"NC_007424.3",189975,"SNV","A","G","Homozygous",20,20,100,1,14,9,0.39,39.05,23,23,11,14,null,1,1,"no","G/G","No",1,80.09,"XP_008191527.1:c.3632T>C","XP_008191527.1:p.Leu1211Pro","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1565,"NC_007424.3",193625,"SNV","C","T","Homozygous",21,21,100,1,8,13,0.38,38.29,21,21,13,16,null,1,1,"no","T/T","No",1,84.7,"XP_008191527.1:c.1222G>A","XP_008191527.1:p.Ala408Thr","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1566,"NC_007424.3",1320356,"SNV","A","T","Homozygous",19,23,82.61,0.53,8,11,0.42,37.37,19,23,11,13,1.38,0.98,0.95,"no","T/T","No",1,3.26,"XP_015838594.1:c.[3797+6789A>T]; XP_015838593.1:c.[4199A>T]","XP_015838593.1:p.Glu1400Val","LOC103314620",103314620,null,"103314620 [Gene Symbol: LOC103314620] [Locus Tag: TcasGA2_TC001938] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314620] [Gene Type: protein-coding]","LOC103314620; TcasGA2_TC001938"]
[1567,"NC_007424.3",2263539,"SNV","G","A","Heterozygous",4,20,20,0.92,4,0,0,39.25,4,21,2,2,0.06,0.51,0.27,"no","A/G","No",1,10.91,"XP_015838608.1:c.[628C>T]; XP_015838611.1:c.[628C>T]; XP_015838609.1:c.[628C>T]; XP_008200943.1:c.[628C>T]","XP_015838608.1:p.[Pro210Ser]; XP_015838611.1:p.[Pro210Ser]; XP_015838609.1:p.[Pro210Ser]; XP_008200943.1:p.[Pro210Ser]","LOC103315043",103315043,null,"103315043 [Gene Symbol: LOC103315043] [Locus Tag: TcasGA2_TC005211] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103315043] [Gene Type: protein-coding]","LOC103315043; TcasGA2_TC005211"]
[1568,"NC_007424.3",2263810,"SNV","T","A","Heterozygous",9,31,29.03,1,0,9,0,38.67,9,33,7,7,0.59,0.31,0.13,"no","A/T","No",1,41.02,"XP_015838608.1:c.[416A>T]; XP_015838611.1:c.[416A>T]; XP_015838609.1:c.[416A>T]; XP_008200943.1:c.[416A>T]","XP_015838608.1:p.[Asn139Ile]; XP_015838611.1:p.[Asn139Ile]; XP_015838609.1:p.[Asn139Ile]; XP_008200943.1:p.[Asn139Ile]","LOC103315043",103315043,null,"103315043 [Gene Symbol: LOC103315043] [Locus Tag: TcasGA2_TC005211] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103315043] [Gene Type: protein-coding]","LOC103315043; TcasGA2_TC005211"]
[1569,"NC_007424.3","2408239..2408240","MNV","GG","TA","Heterozygous",13,23,56.52,1,7,6,0.46,37.27,13,23,9,12,-0.84,0.88,1,"no","complex","No",1,200,"XP_008198593.1:c.2067_2068delCCinsTA","XP_008198593.1:p.Leu690Ile","LOC103314394",103314394,null,"103314394 [Gene Symbol: LOC103314394] [Locus Tag: TcasGA2_TC001668] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC001668; LOC103314394"]
[1570,"NC_007424.3",2417247,"SNV","G","A","Heterozygous",18,31,58.06,1,14,9,0.39,36.94,23,38,9,11,-2.2,0.67,0.99,"no","A/G","No",1,93.22,"XP_008198593.1:c.899C>T","XP_008198593.1:p.Thr300Ile","LOC103314394",103314394,null,"103314394 [Gene Symbol: LOC103314394] [Locus Tag: TcasGA2_TC001668] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC001668; LOC103314394"]
[1571,"NC_007424.3",2424705,"Deletion","T","-","Heterozygous",12,21,57.14,1,9,4,0.31,37.42,13,23,5,8,-1.14,0.84,0.93,"no","-/T","No",1,69.48,"XP_008198596.1:c.134delT","XP_008198596.1:p.Leu45fs","LOC657915",657915,null,"657915 [Gene Symbol: LOC657915] [Locus Tag: TcasGA2_TC001674] [Chromosome: LG9] [Map Location: ] [Description: SH3 domain-binding protein 5 homolog] [Gene Type: protein-coding]","TcasGA2_TC001674; LOC657915"]
[1572,"NC_007424.3",2424737,"SNV","T","C","Heterozygous",14,24,58.33,1,11,4,0.27,36.57,15,26,6,8,-0.59,0.97,1,"no","C/T","No",1,73.29,"XP_008198596.1:c.166T>C","XP_008198596.1:p.Ser56Pro","LOC657915",657915,null,"657915 [Gene Symbol: LOC657915] [Locus Tag: TcasGA2_TC001674] [Chromosome: LG9] [Map Location: ] [Description: SH3 domain-binding protein 5 homolog] [Gene Type: protein-coding]","TcasGA2_TC001674; LOC657915"]
[1573,"NC_007424.3",2424782,"SNV","G","A","Heterozygous",11,22,50,1,4,7,0.36,38.64,11,22,5,8,-0.79,0.46,0.95,"no","A/G","No",1,89.21,"XP_008198596.1:c.211G>A","XP_008198596.1:p.Glu71Lys","LOC657915",657915,null,"657915 [Gene Symbol: LOC657915] [Locus Tag: TcasGA2_TC001674] [Chromosome: LG9] [Map Location: ] [Description: SH3 domain-binding protein 5 homolog] [Gene Type: protein-coding]","TcasGA2_TC001674; LOC657915"]
[1574,"NC_007424.3",2442057,"SNV","T","C","Homozygous",23,23,100,1,18,7,0.28,39,25,25,13,16,null,1,1,"no","C/C","No",1,89.15,"XP_008198597.1:c.[3911A>G]; XP_008198598.1:c.[3833A>G]","XP_008198597.1:p.[Lys1304Arg]; XP_008198598.1:p.[Lys1278Arg]","LOC657993",657993,null,"657993 [Gene Symbol: LOC657993] [Locus Tag: TcasGA2_TC001667] [Chromosome: LG9] [Map Location: ] [Description: integrin alpha-PS2] [Gene Type: protein-coding]","TcasGA2_TC001667; LOC657993"]
[1575,"NC_007424.3",2860255,"SNV","G","A","Heterozygous",16,21,76.19,0.99,6,13,0.32,38,19,24,10,11,-0.04,0.74,0.82,"no","A/G","No",1,19.04,"XP_015838620.1:c.[244G>A]; XP_015838619.1:c.[244G>A]; XP_015838621.1:c.[244G>A]","XP_015838620.1:p.[Ala82Thr]; XP_015838619.1:p.[Ala82Thr]; XP_015838621.1:p.[Ala82Thr]","LOC103314397",103314397,null,"103314397 [Gene Symbol: LOC103314397] [Locus Tag: TcasGA2_TC031231] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314397] [Gene Type: protein-coding]","TcasGA2_TC031231; LOC103314397"]
[1576,"NC_007424.3",3489962,"SNV","C","G","Homozygous",21,21,100,1,10,13,0.43,36.29,23,23,9,9,null,1,1,"no","G/G","No",1,83.1,"XP_970874.1:c.[68C>G]; XP_008197549.1:c.[73+7171C>G]","XP_970874.1:p.Thr23Ser","LOC659477",659477,null,"659477 [Gene Symbol: LOC659477] [Locus Tag: TcasGA2_TC012272] [Chromosome: LG9] [Map Location: ] [Description: protein phosphatase PP2A 55 kDa regulatory subunit] [Gene Type: protein-coding]","TcasGA2_TC012272; LOC659477"]
[1577,"NC_007424.3",3648595,"SNV","A","G","Homozygous",22,22,100,1,16,15,0.48,38.68,31,31,14,12,null,1,1,"no","G/G","No",1,86.11,"XP_008197559.1:c.560T>C","XP_008197559.1:p.Ile187Thr","LOC103314171, LOC103314173","103314171 , 103314173",null,"103314171 [Gene Symbol: LOC103314171] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: 39S ribosomal protein L55, mitochondrial] [Gene Type: protein-coding] || 103314173 [Gene Symbol: LOC103314173] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: ankyrin-3-like] [Gene Type: protein-coding]","LOC103314171 || LOC103314173"]
[1578,"NC_007424.3",3769840,"SNV","C","G","Homozygous",19,21,90.48,0.99,7,16,0.3,38.32,23,26,12,10,null,0.96,1,"no","G/G","No",1,21,"XP_008197589.1:c.1197C>G","XP_008197589.1:p.Asp399Glu","LOC660678",660678,null,"660678 [Gene Symbol: LOC660678] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: UDP-glucuronosyltransferase 2C1-like] [Gene Type: protein-coding]","LOC660678"]
[1579,"NC_007424.3",3819465,"SNV","C","T","Homozygous",20,24,83.33,0.62,4,16,0.2,36.9,20,24,9,13,2.21,0.86,0.99,"no","T/T","No",1,4.17,"XP_008197580.1:c.[1390C>T]; XP_972686.1:c.[1390C>T]; XP_015838849.1:c.[1390C>T]; XP_015838850.1:c.[1297C>T]; XP_008197581.1:c.[1390C>T]","XP_008197580.1:p.[His464Tyr]; XP_972686.1:p.[His464Tyr]; XP_015838849.1:p.[His464Tyr]; XP_015838850.1:p.[His433Tyr]; XP_008197581.1:p.[His464Tyr]","LOC661437",661437,null,"661437 [Gene Symbol: LOC661437] [Locus Tag: TcasGA2_TC012289] [Chromosome: LG9] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC012289; LOC661437"]
[1580,"NC_007424.3",3836052,"SNV","A","G","Homozygous",21,22,95.45,1,9,17,0.35,38.52,26,27,14,15,null,1,1,"no","G/G","No",1,54.35,"XP_015838676.1:c.614A>G","XP_015838676.1:p.Lys205Arg","LOC103314163",103314163,null,"103314163 [Gene Symbol: LOC103314163] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: solute carrier family 2, facilitated glucose transporter member 8-like] [Gene Type: protein-coding]","LOC103314163"]
[1581,"NC_007424.3",3924287,"SNV","G","A","Heterozygous",8,30,26.67,1,6,3,0.33,37.88,9,34,6,4,-0.14,0.85,1,"no","A/G","No",1,31.32,"XP_008197570.1:c.[44-2240G>A]; XP_015838753.1:c.[209C>T]; XP_008197569.1:c.[44-2240G>A]","XP_015838753.1:p.Thr70Ile","LOC661990, LOC107398614","661990 , 107398614",null,"661990 [Gene Symbol: LOC661990] [Locus Tag: TcasGA2_TC012301] [Chromosome: LG9] [Map Location: ] [Description: protein Skeletor, isoforms B/C] [Gene Type: protein-coding] || 107398614 [Gene Symbol: LOC107398614] [Locus Tag: TcasGA2_TC012173] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC107398614] [Gene Type: protein-coding]","LOC661990; TcasGA2_TC012301 || TcasGA2_TC012173; LOC107398614"]
[1582,"NC_007424.3",3979519,"SNV","A","T","Homozygous",21,21,100,1,8,18,0.31,36.62,26,26,10,14,null,1,1,"no","T/T","No",1,84.7,"NP_001164246.1:c.[1081T>A]; XP_008197529.1:c.[1081T>A]","NP_001164246.1:p.[Leu361Met]; XP_008197529.1:p.[Leu361Met]","LOC662353",662353,"epsin-like protein","662353 [Gene Symbol: LOC662353] [Locus Tag: TcasGA2_TC012168] [Chromosome: LG9] [Map Location: ] [Description: epsin-like protein] [Gene Type: protein-coding]","TcasGA2_TC012168; LOC662353; GLEAN_12168"]
[1583,"NC_007424.3",3993990,"SNV","A","C","Homozygous",20,20,100,1,12,11,0.48,38.9,23,23,11,11,null,1,1,"no","C/C","No",1,80.12,"XP_015838644.1:c.1124A>C","XP_015838644.1:p.Asn375Thr","LOC662526",662526,null,"662526 [Gene Symbol: LOC662526] [Locus Tag: TcasGA2_TC012309] [Chromosome: LG9] [Map Location: ] [Description: glycogen debranching enzyme] [Gene Type: protein-coding]","TcasGA2_TC012309; LOC662526"]
[1584,"NC_007424.3",3995687,"SNV","A","C","Heterozygous",16,20,80,0.73,11,9,0.45,37.31,20,25,7,11,1.09,0.83,1,"no","A/C","No",1,5.7,"XP_015838644.1:c.2512A>C","XP_015838644.1:p.Ile838Leu","LOC662526",662526,null,"662526 [Gene Symbol: LOC662526] [Locus Tag: TcasGA2_TC012309] [Chromosome: LG9] [Map Location: ] [Description: glycogen debranching enzyme] [Gene Type: protein-coding]","TcasGA2_TC012309; LOC662526"]
[1585,"NC_007424.3",3995715,"SNV","G","A","Homozygous",21,26,80.77,0.76,12,9,0.43,38.43,21,27,9,15,0.88,0.99,0.99,"no","A/G","No",1,6.23,"XP_015838644.1:c.2540G>A","XP_015838644.1:p.Ser847Asn","LOC662526",662526,null,"662526 [Gene Symbol: LOC662526] [Locus Tag: TcasGA2_TC012309] [Chromosome: LG9] [Map Location: ] [Description: glycogen debranching enzyme] [Gene Type: protein-coding]","TcasGA2_TC012309; LOC662526"]
[1586,"NC_007424.3","4868298..4868299","MNV","TC","CA","Homozygous",21,21,100,1,4,17,0.19,39.98,21,21,8,8,null,1,1,"no","CA/CA","No",1,200,"XP_967356.1:c.75_76delTCinsCA","XP_967356.1:p.His26Asn","LOC655702",655702,null,"655702 [Gene Symbol: LOC655702] [Locus Tag: TcasGA2_TC012328] [Chromosome: LG9] [Map Location: ] [Description: peroxiredoxin-1] [Gene Type: protein-coding]","TcasGA2_TC012328; LOC655702"]
[1587,"NC_007424.3",5035888,"SNV","G","A","Homozygous",31,31,100,1,17,19,0.47,38,36,36,21,23,null,1,1,"no","A/A","No",1,114.78,"XP_008197643.1:c.[1511G>A]; XP_008197642.1:c.[1511G>A]","XP_008197643.1:p.[Arg504Gln]; XP_008197642.1:p.[Arg504Gln]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1588,"NC_007424.3",5036154,"SNV","A","G","Homozygous",24,24,100,1,15,11,0.42,38.79,26,26,14,16,null,1,1,"no","G/G","No",1,92.12,"XP_008197642.1:c.[1777A>G]; XP_008197643.1:c.[1777A>G]","XP_008197642.1:p.[Thr593Ala]; XP_008197643.1:p.[Thr593Ala]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1589,"NC_007424.3",5036665,"SNV","G","C","Homozygous",24,24,100,1,14,10,0.42,37.33,24,24,11,15,null,1,1,"no","C/C","No",1,92.16,"XP_008197643.1:c.[2288G>C]; XP_008197642.1:c.[2288G>C]","XP_008197643.1:p.[Ser763Thr]; XP_008197642.1:p.[Ser763Thr]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1590,"NC_007424.3",5037292,"Deletion","T","-","Heterozygous",11,24,45.83,1,11,2,0.15,37.45,13,27,5,8,-1.19,0.64,0.87,"no","-/T","No",1,85.3,"XP_008197643.1:c.[2866delT]; XP_008197642.1:c.[2866delT]","XP_008197643.1:p.[Ser956fs]; XP_008197642.1:p.[Ser956fs]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1591,"NC_007424.3",5037337,"SNV","G","A","Heterozygous",13,23,56.52,1,13,3,0.19,34.62,16,27,10,11,0.37,0.81,0.86,"no","A/G","No",1,79.92,"XP_008197643.1:c.[2911G>A]; XP_008197642.1:c.[2911G>A]","XP_008197643.1:p.[Ala971Thr]; XP_008197642.1:p.[Ala971Thr]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1592,"NC_007424.3",5044913,"SNV","T","A","Homozygous",24,24,100,1,7,21,0.25,38.33,28,28,11,13,null,1,1,"no","A/A","No",1,93.72,"XP_015838749.1:c.[1290A>T]; XP_008197647.1:c.[1461A>T]; XP_008197645.1:c.[1290A>T]","XP_015838749.1:p.[Leu430Phe]; XP_008197647.1:p.[Leu487Phe]; XP_008197645.1:p.[Leu430Phe]","LOC656621",656621,null,"656621 [Gene Symbol: LOC656621] [Locus Tag: TcasGA2_TC012131] [Chromosome: LG9] [Map Location: ] [Description: xanthine dehydrogenase] [Gene Type: protein-coding]","LOC656621; TcasGA2_TC012131"]
[1593,"NC_007424.3",5063846,"SNV","T","C","Homozygous",20,20,100,1,11,10,0.48,38.35,21,21,10,12,null,1,1,"no","C/C","No",1,80.12,"XP_008197649.1:c.[577A>G]; XP_008197648.1:c.[577A>G]","XP_008197649.1:p.[Lys193Glu]; XP_008197648.1:p.[Lys193Glu]","LOC656875",656875,null,"656875 [Gene Symbol: LOC656875] [Locus Tag: TcasGA2_TC012129] [Chromosome: LG9] [Map Location: ] [Description: transport and Golgi organization protein 1] [Gene Type: protein-coding]","TcasGA2_TC012129; LOC656875"]
[1594,"NC_007424.3",5188420,"SNV","A","G","Homozygous",24,25,96,1,11,13,0.46,38.17,24,25,7,13,null,1,1,"no","G/G","No",1,69.14,"XP_001811380.1:c.[320T>C]; XP_008197665.1:c.[338T>C]; XP_008197666.1:c.[224T>C]","XP_001811380.1:p.[Ile107Thr]; XP_008197665.1:p.[Ile113Thr]; XP_008197666.1:p.[Ile75Thr]","LOC100142002",100142002,null,"100142002 [Gene Symbol: LOC100142002] [Locus Tag: TcasGA2_TC012126] [Chromosome: LG9] [Map Location: ] [Description: probable aminoacyl tRNA synthase complex-interacting multifunctional protein 2] [Gene Type: protein-coding]","LOC100142002; TcasGA2_TC012126"]
[1595,"NC_007424.3",5205481,"SNV","G","A","Homozygous",20,20,100,1,17,8,0.32,37.65,25,25,12,16,null,1,1,"no","A/A","No",1,81.69,"XP_966343.1:c.727C>T","XP_966343.1:p.Leu243Phe","LOC656992",656992,null,"656992 [Gene Symbol: LOC656992] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: 4-aminobutyrate aminotransferase, mitochondrial-like] [Gene Type: protein-coding]","LOC656992"]
[1596,"NC_007424.3",5241005,"SNV","A","T","Homozygous",23,23,100,1,16,7,0.3,38.26,23,23,11,16,null,1,1,"no","T/T","No",1,90.72,"XP_015838725.1:c.[400A>T]; XP_015838729.1:c.[142A>T]; XP_015838726.1:c.[400A>T]; XP_008197678.1:c.[400A>T]; XP_015838734.1:c.[142A>T]; XP_015838731.1:c.[196A>T]; XP_015838733.1:c.[193A>T]; XP_015838730.1:c.[400A>T]; XP_015838728.1:c.[271A>T]; XP_015838727.1:c.[280A>T]; XP_015838732.1:c.[196A>T]; XP_015838724.1:c.[400A>T]","XP_015838725.1:p.[Thr134Ser]; XP_015838729.1:p.[Thr48Ser]; XP_015838726.1:p.[Thr134Ser]; XP_008197678.1:p.[Thr134Ser]; XP_015838734.1:p.[Thr48Ser]; XP_015838731.1:p.[Thr66Ser]; XP_015838733.1:p.[Thr65Ser]; XP_015838730.1:p.[Thr134Ser]; XP_015838728.1:p.[Thr91Ser]; XP_015838727.1:p.[Thr94Ser]; XP_015838732.1:p.[Thr66Ser]; XP_015838724.1:p.[Thr134Ser]","Doc, LOC100141654","654492 , 100141654","dorsocross","654492 [Gene Symbol: Doc] [Locus Tag: TcasGA2_TC012346] [Chromosome: LG9] [Map Location: ] [Description: dorsocross] [Gene Type: protein-coding] || 100141654 [Gene Symbol: LOC100141654] [Locus Tag: TcasGA2_TC012347] [Chromosome: LG9] [Map Location: ] [Description: kinase D-interacting substrate of 220 kDa] [Gene Type: protein-coding]","Doc; Tc-doc; TcasGA2_TC012346 || TcasGA2_TC012347; LOC100141654"]
[1597,"NC_007424.3",5487630,"SNV","G","A","Homozygous",23,23,100,1,16,11,0.41,38.22,27,27,12,18,null,1,1,"no","A/A","No",1,90.72,"XP_008197689.1:c.3517G>A","XP_008197689.1:p.Val1173Ile","LOC100142008",100142008,null,"100142008 [Gene Symbol: LOC100142008] [Locus Tag: TcasGA2_TC012353] [Chromosome: LG9] [Map Location: ] [Description: mucin-4] [Gene Type: protein-coding]","TcasGA2_TC012353; LOC100142008"]
[1598,"NC_007424.3",5734696,"SNV","C","G","Homozygous",24,24,100,1,6,18,0.25,37.83,24,24,8,13,null,1,1,"no","G/G","No",1,92.13,"XP_008197709.1:c.[3280G>C]; XP_008197710.1:c.[3280G>C]; XP_015838761.1:c.[611-987G>C]; XP_015838762.1:c.[611-7585G>C]","XP_008197709.1:p.[Glu1094Gln]; XP_008197710.1:p.[Glu1094Gln]","LOC658064",658064,null,"658064 [Gene Symbol: LOC658064] [Locus Tag: TcasGA2_TC012107] [Chromosome: LG9] [Map Location: ] [Description: putative protein kinase C delta type homolog] [Gene Type: protein-coding]","LOC658064; TcasGA2_TC012107"]
[1599,"NC_007424.3",5734963,"SNV","T","G","Homozygous",31,31,100,1,25,11,0.31,37.48,36,36,14,22,null,1,1,"no","G/G","No",1,110.18,"XP_015838761.1:c.[611-1254A>C]; XP_015838762.1:c.[610+7499A>C]; XP_008197710.1:c.[3013A>C]; XP_008197709.1:c.[3013A>C]","XP_008197710.1:p.[Lys1005Gln]; XP_008197709.1:p.[Lys1005Gln]","LOC658064",658064,null,"658064 [Gene Symbol: LOC658064] [Locus Tag: TcasGA2_TC012107] [Chromosome: LG9] [Map Location: ] [Description: putative protein kinase C delta type homolog] [Gene Type: protein-coding]","LOC658064; TcasGA2_TC012107"]
[1600,"NC_007424.3",5734971,"SNV","G","T","Homozygous",28,28,100,1,22,12,0.35,39.43,34,34,13,19,null,1,1,"no","T/T","No",1,105.76,"XP_008197710.1:c.[3005C>A]; XP_015838762.1:c.[610+7491C>A]; XP_015838761.1:c.[611-1262C>A]; XP_008197709.1:c.[3005C>A]","XP_008197710.1:p.[Thr1002Asn]; XP_008197709.1:p.[Thr1002Asn]","LOC658064",658064,null,"658064 [Gene Symbol: LOC658064] [Locus Tag: TcasGA2_TC012107] [Chromosome: LG9] [Map Location: ] [Description: putative protein kinase C delta type homolog] [Gene Type: protein-coding]","LOC658064; TcasGA2_TC012107"]
[1601,"NC_007424.3",5753530,"SNV","T","A","Homozygous",20,20,100,1,14,7,0.33,38.7,21,21,13,15,null,1,1,"no","A/A","No",1,81.69,"XP_969798.1:c.1019T>A","XP_969798.1:p.Phe340Tyr","LOC658303",658303,null,"658303 [Gene Symbol: LOC658303] [Locus Tag: TcasGA2_TC012364] [Chromosome: LG9] [Map Location: ] [Description: glucoside xylosyltransferase 2] [Gene Type: protein-coding]","LOC658303; TcasGA2_TC012364"]
[1602,"NC_007424.3","5830055..5830056","MNV","AG","GA","Homozygous",20,20,100,1,6,18,0.25,38.72,24,24,11,14,null,1,1,"no","GA/GA","No",1,200,"XP_015838711.1:c.[1394_1395delCTinsTC]; XP_008197729.1:c.[1394_1395delCTinsTC]; XP_015838712.1:c.[1394_1395delCTinsTC]","XP_015838711.1:p.[Pro465Leu]; XP_008197729.1:p.[Pro465Leu]; XP_015838712.1:p.[Pro465Leu]","LOC659540",659540,null,"659540 [Gene Symbol: LOC659540] [Locus Tag: TcasGA2_TC012101] [Chromosome: LG9] [Map Location: ] [Description: acylamino-acid-releasing enzyme] [Gene Type: protein-coding]","LOC659540; TcasGA2_TC012101"]
[1603,"NC_007424.3","5832634^5832635","Insertion","-","GCT","Homozygous",20,20,100,1,5,18,0.22,36.9,23,23,12,14,null,1,1,"no","GCT/GCT","No",1,200,"XP_015838711.1:c.[489_490insAGC]; XP_015838712.1:c.[489_490insAGC]; XP_008197729.1:c.[489_490insAGC]","XP_015838711.1:p.[Ser163_Asp164insSer]; XP_015838712.1:p.[Ser163_Asp164insSer]; XP_008197729.1:p.[Ser163_Asp164insSer]","LOC659540",659540,null,"659540 [Gene Symbol: LOC659540] [Locus Tag: TcasGA2_TC012101] [Chromosome: LG9] [Map Location: ] [Description: acylamino-acid-releasing enzyme] [Gene Type: protein-coding]","LOC659540; TcasGA2_TC012101"]
[1604,"NC_007424.3",6079165,"SNV","T","G","Homozygous",23,23,100,1,17,9,0.35,36.83,26,26,9,13,null,1,1,"no","G/G","No",1,89.12,"XP_008197748.1:c.[625A>C]; XP_972190.1:c.[4078-3249T>G]","XP_008197748.1:p.Lys209Gln","LOC660900, LOC103314202","660900 , 103314202",null,"660900 [Gene Symbol: LOC660900] [Locus Tag: TcasGA2_TC012392] [Chromosome: LG9] [Map Location: ] [Description: CAD protein] [Gene Type: protein-coding] || 103314202 [Gene Symbol: LOC103314202] [Locus Tag: TcasGA2_TC012093] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314202] [Gene Type: protein-coding]","LOC660900; TcasGA2_TC012392 || LOC103314202; TcasGA2_TC012093"]
[1605,"NC_007424.3",6083978,"SNV","G","A","Homozygous",21,21,100,1,13,14,0.48,36.67,27,27,14,12,null,1,1,"no","A/A","No",1,84.71,"XP_972190.1:c.5642G>A","XP_972190.1:p.Gly1881Asp","LOC660900",660900,null,"660900 [Gene Symbol: LOC660900] [Locus Tag: TcasGA2_TC012392] [Chromosome: LG9] [Map Location: ] [Description: CAD protein] [Gene Type: protein-coding]","LOC660900; TcasGA2_TC012392"]
[1606,"NC_007424.3",6088219,"SNV","T","A","Homozygous",21,21,100,1,17,5,0.23,37.76,22,22,9,15,null,1,1,"no","A/A","No",1,84.7,"XP_008197747.1:c.327A>T","XP_008197747.1:p.Gln109His","LOC103314201",103314201,null,"103314201 [Gene Symbol: LOC103314201] [Locus Tag: TcasGA2_TC012092] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC012092; LOC103314201"]
[1607,"NC_007424.3","6188964..6188965","MNV","GC","TT","Homozygous",19,21,90.48,1,10,13,0.43,37.16,23,27,11,16,null,0.84,1,"no","TT/TT","No",1,200,"XP_008197754.1:c.[594_595delGCinsAA]; XP_008197758.1:c.[594_595delGCinsAA]; XP_008197756.1:c.[594_595delGCinsAA]; XP_008197755.1:c.[594_595delGCinsAA]; XP_008197759.1:c.[594_595delGCinsAA]; XP_008197757.1:c.[528_529delGCinsAA]","XP_008197754.1:p.[Leu199Ile]; XP_008197758.1:p.[Leu199Ile]; XP_008197756.1:p.[Leu199Ile]; XP_008197755.1:p.[Leu199Ile]; XP_008197759.1:p.[Leu199Ile]; XP_008197757.1:p.[Leu177Ile]","LOC661284",661284,null,"661284 [Gene Symbol: LOC661284] [Locus Tag: TcasGA2_TC012085] [Chromosome: LG9] [Map Location: ] [Description: partitioning defective 3 homolog B] [Gene Type: protein-coding]","TcasGA2_TC012085; LOC661284"]
[1608,"NC_007424.3",6669224,"SNV","C","A","Heterozygous",6,21,28.57,1,6,0,0,38.67,6,21,2,5,0.82,0.09,0.59,"no","A/C","No",1,27.07,"XP_973013.1:c.474C>A","XP_973013.1:p.Asp158Glu","LOC661779",661779,null,"661779 [Gene Symbol: LOC661779] [Locus Tag: TcasGA2_TC012405] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized protein C15orf26] [Gene Type: protein-coding]","LOC661779; TcasGA2_TC012405"]
[1609,"NC_007424.3",6702009,"SNV","T","G","Homozygous",25,25,100,1,14,17,0.45,36.64,31,31,11,20,null,1,1,"no","G/G","No",1,95.13,"XP_966481.1:c.481T>G","XP_966481.1:p.Ser161Ala","LOC654948",654948,null,"654948 [Gene Symbol: LOC654948] [Locus Tag: TcasGA2_TC012407] [Chromosome: LG9] [Map Location: ] [Description: methenyltetrahydrofolate synthase domain-containing protein] [Gene Type: protein-coding]","TcasGA2_TC012407; LOC654948"]
[1610,"NC_007424.3",7067089,"SNV","A","G","Homozygous",20,20,100,1,13,11,0.46,38.25,24,24,11,12,null,1,1,"no","G/G","No",1,80.09,"XP_015838683.1:c.[413T>C]; XP_008197811.1:c.[419T>C]","XP_015838683.1:p.[Leu138Pro]; XP_008197811.1:p.[Leu140Pro]","LOC657435",657435,null,"657435 [Gene Symbol: LOC657435] [Locus Tag: TcasGA2_TC012052] [Chromosome: LG9] [Map Location: ] [Description: salivary glue protein Sgs-4] [Gene Type: protein-coding]","LOC657435; TcasGA2_TC012052"]
[1611,"NC_007424.3","7081276..7081277","MNV","AA","GT","Homozygous",26,26,100,1,24,7,0.23,36.78,31,31,18,18,null,1,1,"no","GT/GT","No",1,200,"XP_008197817.1:c.749_750delTTinsAC","XP_008197817.1:p.Phe250Tyr","LOC103314220",103314220,null,"103314220 [Gene Symbol: LOC103314220] [Locus Tag: TcasGA2_TC012049] [Chromosome: LG9] [Map Location: ] [Description: vacuolar protein sorting-associated protein VTA1 homolog] [Gene Type: protein-coding]","TcasGA2_TC012049; LOC103314220"]
[1612,"NC_007424.3","7452370^7452371","Insertion","-","CAG","Heterozygous",5,24,20.83,1,0,5,0,36.67,5,28,2,4,-1.87,0.04,0.17,"no","complex","No",1,200,"XP_008197843.1:c.[1914_1915insCAG]; XP_008197844.1:c.[1893_1894insCAG]; XP_971362.2:c.[1860_1861insCAG]; XP_015838722.1:c.[1785_1786insCAG]; XP_015838721.1:c.[1806_1807insCAG]; XP_008197845.1:c.[1686_1687insCAG]","XP_008197843.1:p.[Gln642_Ser643insGln]; XP_008197844.1:p.[Gln635_Ser636insGln]; XP_971362.2:p.[Gln624_Ser625insGln]; XP_015838722.1:p.[Gln599_Ser600insGln]; XP_015838721.1:p.[Gln606_Ser607insGln]; XP_008197845.1:p.[Gln566_Ser567insGln]","LOC660005",660005,null,"660005 [Gene Symbol: LOC660005] [Locus Tag: TcasGA2_TC012438] [Chromosome: LG9] [Map Location: ] [Description: ecdysone-inducible protein E75] [Gene Type: protein-coding]","TcasGA2_TC012438; E75C; LOC660005; E75; Eip75B; E75B; NR1D3"]
[1613,"NC_007424.3",7477950,"SNV","T","C","Homozygous",22,22,100,1,13,9,0.41,38.14,22,22,11,15,null,1,1,"no","C/C","No",1,86.13,"XP_971422.1:c.1744A>G","XP_971422.1:p.Lys582Glu","LOC660067",660067,null,"660067 [Gene Symbol: LOC660067] [Locus Tag: TcasGA2_TC012032] [Chromosome: LG9] [Map Location: ] [Description: pre-rRNA processing protein FTSJ3] [Gene Type: protein-coding]","LOC660067; TcasGA2_TC012032"]
[1614,"NC_007424.3",7708570,"SNV","G","C","Homozygous",23,23,100,1,16,8,0.33,37.48,24,24,10,13,null,1,1,"no","C/C","No",1,89.14,"XP_008197857.1:c.[1864C>G]; XP_008197856.1:c.[2308C>G]","XP_008197857.1:p.[Leu622Val]; XP_008197856.1:p.[Leu770Val]","LOC660795",660795,null,"660795 [Gene Symbol: LOC660795] [Locus Tag: TcasGA2_TC012023] [Chromosome: LG9] [Map Location: ] [Description: WD repeat and HMG-box DNA-binding protein 1] [Gene Type: protein-coding]","TcasGA2_TC012023; LOC660795"]
[1615,"NC_007424.3",8054814,"SNV","C","T","Homozygous",21,22,95.45,1,18,7,0.28,35.43,25,26,12,14,null,0.99,1,"no","T/T","No",1,55.9,"XP_001809953.1:c.2816G>A","XP_001809953.1:p.Ser939Asn","LOC100141957",100141957,null,"100141957 [Gene Symbol: LOC100141957] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141957] [Gene Type: protein-coding]","LOC100141957"]
[1616,"NC_007424.3","8055059..8055060","MNV","AG","GC","Homozygous",25,25,100,1,11,15,0.42,37.59,26,26,10,16,null,1,1,"no","GC/GC","No",1,200,"XP_001809953.1:c.2570_2571delCTinsGC","XP_001809953.1:p.Ala857Gly","LOC100141957",100141957,null,"100141957 [Gene Symbol: LOC100141957] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141957] [Gene Type: protein-coding]","LOC100141957"]
[1617,"NC_007424.3",8055426,"SNV","A","T","Homozygous",30,30,100,1,22,9,0.29,36.83,31,31,15,21,null,1,1,"no","T/T","No",1,111.78,"XP_001809953.1:c.2251T>A","XP_001809953.1:p.Ser751Thr","LOC100141957",100141957,null,"100141957 [Gene Symbol: LOC100141957] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141957] [Gene Type: protein-coding]","LOC100141957"]
[1618,"NC_007424.3",8087222,"SNV","C","A","Heterozygous",14,20,70,1,7,10,0.41,37.57,17,23,8,12,-1.24,0.73,0.92,"no","A/C","No",1,34.22,"XP_015838998.1:c.[44626G>T]; XP_015839004.1:c.[44395G>T]; XP_015839007.1:c.[34522G>T]; XP_015839001.1:c.[44551G>T]; XP_015838996.1:c.[44611G>T]; XP_015838997.1:c.[44599G>T]; XP_015839000.1:c.[44563G>T]; XP_015838999.1:c.[44584G>T]; XP_015839005.1:c.[44320G>T]; XP_015839010.1:c.[34216G>T]; XP_015839006.1:c.[44626G>T]; XP_015839003.1:c.[44437G>T]; XP_015839002.1:c.[44509G>T]; XP_015839008.1:c.[34216G>T]","XP_015838998.1:p.[Gly14876Trp]; XP_015839004.1:p.[Gly14799Trp]; XP_015839007.1:p.[Gly11508Trp]; XP_015839001.1:p.[Gly14851Trp]; XP_015838996.1:p.[Gly14871Trp]; XP_015838997.1:p.[Gly14867Trp]; XP_015839000.1:p.[Gly14855Trp]; XP_015838999.1:p.[Gly14862Trp]; XP_015839005.1:p.[Gly14774Trp]; XP_015839010.1:p.[Gly11406Trp]; XP_015839006.1:p.[Gly14876Trp]; XP_015839003.1:p.[Gly14813Trp]; XP_015839002.1:p.[Gly14837Trp]; XP_015839008.1:p.[Gly11406Trp]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1619,"NC_007424.3",8101680,"SNV","C","G","Heterozygous",7,24,29.17,1,0,7,0,36.57,7,24,2,5,-0.29,0.03,0.59,"no","C/G","No",1,35.02,"XP_015839004.1:c.[37436G>C]; XP_015839003.1:c.[37478G>C]; XP_015839008.1:c.[27257G>C]; XP_015838998.1:c.[37667G>C]; XP_015839007.1:c.[27563G>C]; XP_015838996.1:c.[37652G>C]; XP_015839002.1:c.[37550G>C]; XP_015839001.1:c.[37592G>C]; XP_015839006.1:c.[37667G>C]; XP_015838999.1:c.[37625G>C]; XP_015838997.1:c.[37640G>C]; XP_015839000.1:c.[37604G>C]; XP_015839005.1:c.[37361G>C]; XP_015839010.1:c.[27257G>C]","XP_015839004.1:p.[Arg12479Pro]; XP_015839003.1:p.[Arg12493Pro]; XP_015839008.1:p.[Arg9086Pro]; XP_015838998.1:p.[Arg12556Pro]; XP_015839007.1:p.[Arg9188Pro]; XP_015838996.1:p.[Arg12551Pro]; XP_015839002.1:p.[Arg12517Pro]; XP_015839001.1:p.[Arg12531Pro]; XP_015839006.1:p.[Arg12556Pro]; XP_015838999.1:p.[Arg12542Pro]; XP_015838997.1:p.[Arg12547Pro]; XP_015839000.1:p.[Arg12535Pro]; XP_015839005.1:p.[Arg12454Pro]; XP_015839010.1:p.[Arg9086Pro]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1620,"NC_007424.3",8102974,"SNV","C","T","Homozygous",22,22,100,1,9,16,0.36,36.32,25,25,12,18,null,1,1,"no","T/T","No",1,87.71,"XP_015839008.1:c.[25963G>A]; XP_015839002.1:c.[36256G>A]; XP_015839006.1:c.[36373G>A]; XP_015839000.1:c.[36310G>A]; XP_015838997.1:c.[36346G>A]; XP_015839001.1:c.[36298G>A]; XP_015839004.1:c.[36142G>A]; XP_015839003.1:c.[36184G>A]; XP_015839007.1:c.[26269G>A]; XP_015838996.1:c.[36358G>A]; XP_015838999.1:c.[36331G>A]; XP_015839005.1:c.[36067G>A]; XP_015839010.1:c.[25963G>A]; XP_015838998.1:c.[36373G>A]","XP_015839008.1:p.[Val8655Ile]; XP_015839002.1:p.[Val12086Ile]; XP_015839006.1:p.[Val12125Ile]; XP_015839000.1:p.[Val12104Ile]; XP_015838997.1:p.[Val12116Ile]; XP_015839001.1:p.[Val12100Ile]; XP_015839004.1:p.[Val12048Ile]; XP_015839003.1:p.[Val12062Ile]; XP_015839007.1:p.[Val8757Ile]; XP_015838996.1:p.[Val12120Ile]; XP_015838999.1:p.[Val12111Ile]; XP_015839005.1:p.[Val12023Ile]; XP_015839010.1:p.[Val8655Ile]; XP_015838998.1:p.[Val12125Ile]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1621,"NC_007424.3",8104633,"SNV","G","C","Homozygous",21,21,100,1,16,6,0.27,38.05,22,22,11,18,null,1,1,"no","C/C","No",1,83.12,"XP_015838999.1:c.[34672C>G]; XP_015838996.1:c.[34699C>G]; XP_015839004.1:c.[34483C>G]; XP_015838997.1:c.[34687C>G]; XP_015839000.1:c.[34651C>G]; XP_015839001.1:c.[34639C>G]; XP_015839006.1:c.[34714C>G]; XP_015839007.1:c.[24610C>G]; XP_015839010.1:c.[24304C>G]; XP_015839003.1:c.[34525C>G]; XP_015839002.1:c.[34597C>G]; XP_015839008.1:c.[24304C>G]; XP_015838998.1:c.[34714C>G]; XP_015839005.1:c.[34408C>G]","XP_015838999.1:p.[Gln11558Glu]; XP_015838996.1:p.[Gln11567Glu]; XP_015839004.1:p.[Gln11495Glu]; XP_015838997.1:p.[Gln11563Glu]; XP_015839000.1:p.[Gln11551Glu]; XP_015839001.1:p.[Gln11547Glu]; XP_015839006.1:p.[Gln11572Glu]; XP_015839007.1:p.[Gln8204Glu]; XP_015839010.1:p.[Gln8102Glu]; XP_015839003.1:p.[Gln11509Glu]; XP_015839002.1:p.[Gln11533Glu]; XP_015839008.1:p.[Gln8102Glu]; XP_015838998.1:p.[Gln11572Glu]; XP_015839005.1:p.[Gln11470Glu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1622,"NC_007424.3",8111808,"SNV","A","G","Homozygous",21,21,100,1,13,12,0.48,38.71,25,25,13,12,null,1,1,"no","G/G","No",1,83.1,"XP_015839007.1:c.[23728-5423T>C]; XP_015839004.1:c.[28388T>C]; XP_015838997.1:c.[28592T>C]; XP_015838998.1:c.[28619T>C]; XP_015839008.1:c.[23422-5423T>C]; XP_015839003.1:c.[28430T>C]; XP_015839006.1:c.[28619T>C]; XP_015839002.1:c.[28502T>C]; XP_015839005.1:c.[28313T>C]; XP_015839001.1:c.[28544T>C]; XP_015838999.1:c.[28577T>C]; XP_015838996.1:c.[28604T>C]; XP_015839000.1:c.[28556T>C]; XP_015839010.1:c.[23422-5423T>C]","XP_015839004.1:p.[Ile9463Thr]; XP_015838997.1:p.[Ile9531Thr]; XP_015838998.1:p.[Ile9540Thr]; XP_015839003.1:p.[Ile9477Thr]; XP_015839006.1:p.[Ile9540Thr]; XP_015839002.1:p.[Ile9501Thr]; XP_015839005.1:p.[Ile9438Thr]; XP_015839001.1:p.[Ile9515Thr]; XP_015838999.1:p.[Ile9526Thr]; XP_015838996.1:p.[Ile9535Thr]; XP_015839000.1:p.[Ile9519Thr]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1623,"NC_007424.3",8111813,"SNV","T","C","Homozygous",20,21,95.24,1,10,12,0.45,38.75,22,23,13,12,null,1,1,"no","C/C","No",1,53.5,"XP_015839005.1:c.[28308A>G]; XP_015838998.1:c.[28614A>G]; XP_015839002.1:c.[28497A>G]; XP_015838997.1:c.[28587A>G]; XP_015839001.1:c.[28539A>G]; XP_015839010.1:c.[23422-5428A>G]; XP_015838999.1:c.[28572A>G]; XP_015839007.1:c.[23728-5428A>G]; XP_015838996.1:c.[28599A>G]; XP_015839008.1:c.[23422-5428A>G]; XP_015839003.1:c.[28425A>G]; XP_015839000.1:c.[28551A>G]; XP_015839006.1:c.[28614A>G]; XP_015839004.1:c.[28383A>G]","XP_015839005.1:p.[Ile9436Met]; XP_015838998.1:p.[Ile9538Met]; XP_015839002.1:p.[Ile9499Met]; XP_015838997.1:p.[Ile9529Met]; XP_015839001.1:p.[Ile9513Met]; XP_015838999.1:p.[Ile9524Met]; XP_015838996.1:p.[Ile9533Met]; XP_015839003.1:p.[Ile9475Met]; XP_015839000.1:p.[Ile9517Met]; XP_015839006.1:p.[Ile9538Met]; XP_015839004.1:p.[Ile9461Met]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1624,"NC_007424.3",8111827,"SNV","C","G","Homozygous",22,22,100,1,11,13,0.46,38.55,24,24,14,13,null,1,1,"no","G/G","No",1,86.11,"XP_015839006.1:c.[28600G>C]; XP_015839002.1:c.[28483G>C]; XP_015838999.1:c.[28558G>C]; XP_015838996.1:c.[28585G>C]; XP_015839007.1:c.[23728-5442G>C]; XP_015838997.1:c.[28573G>C]; XP_015839008.1:c.[23422-5442G>C]; XP_015839001.1:c.[28525G>C]; XP_015839010.1:c.[23422-5442G>C]; XP_015839005.1:c.[28294G>C]; XP_015839003.1:c.[28411G>C]; XP_015839004.1:c.[28369G>C]; XP_015838998.1:c.[28600G>C]; XP_015839000.1:c.[28537G>C]","XP_015839006.1:p.[Val9534Leu]; XP_015839002.1:p.[Val9495Leu]; XP_015838999.1:p.[Val9520Leu]; XP_015838996.1:p.[Val9529Leu]; XP_015838997.1:p.[Val9525Leu]; XP_015839001.1:p.[Val9509Leu]; XP_015839005.1:p.[Val9432Leu]; XP_015839003.1:p.[Val9471Leu]; XP_015839004.1:p.[Val9457Leu]; XP_015838998.1:p.[Val9534Leu]; XP_015839000.1:p.[Val9513Leu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1625,"NC_007424.3",8124566,"SNV","C","T","Homozygous",30,30,100,1,18,15,0.45,36.77,33,33,14,22,null,1,1,"no","T/T","No",1,111.77,"XP_015838997.1:c.[21127G>A]; XP_015839010.1:c.[20848G>A]; XP_015839006.1:c.[21154G>A]; XP_015839009.1:c.[21154G>A]; XP_015839005.1:c.[20848G>A]; XP_015838998.1:c.[21154G>A]; XP_015839011.1:c.[21037G>A]; XP_015838996.1:c.[21139G>A]; XP_015839008.1:c.[20848G>A]; XP_015839007.1:c.[21154G>A]; XP_015838999.1:c.[21112G>A]; XP_015839004.1:c.[20923G>A]; XP_015839002.1:c.[21037G>A]; XP_015839003.1:c.[20965G>A]; XP_015839000.1:c.[21154G>A]; XP_015839001.1:c.[21079G>A]","XP_015838997.1:p.[Asp7043Asn]; XP_015839010.1:p.[Asp6950Asn]; XP_015839006.1:p.[Asp7052Asn]; XP_015839009.1:p.[Asp7052Asn]; XP_015839005.1:p.[Asp6950Asn]; XP_015838998.1:p.[Asp7052Asn]; XP_015839011.1:p.[Asp7013Asn]; XP_015838996.1:p.[Asp7047Asn]; XP_015839008.1:p.[Asp6950Asn]; XP_015839007.1:p.[Asp7052Asn]; XP_015838999.1:p.[Asp7038Asn]; XP_015839004.1:p.[Asp6975Asn]; XP_015839002.1:p.[Asp7013Asn]; XP_015839003.1:p.[Asp6989Asn]; XP_015839000.1:p.[Asp7052Asn]; XP_015839001.1:p.[Asp7027Asn]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1626,"NC_007424.3",8126204,"SNV","A","G","Homozygous",34,34,100,1,20,16,0.44,36.76,36,36,13,22,null,1,1,"no","G/G","No",1,122.22,"XP_015839000.1:c.[19516T>C]; XP_015839011.1:c.[19399T>C]; XP_015839010.1:c.[19210T>C]; XP_015838999.1:c.[19474T>C]; XP_015839001.1:c.[19441T>C]; XP_015839003.1:c.[19327T>C]; XP_015839002.1:c.[19399T>C]; XP_015839005.1:c.[19210T>C]; XP_015839007.1:c.[19516T>C]; XP_015839006.1:c.[19516T>C]; XP_015839008.1:c.[19210T>C]; XP_015839009.1:c.[19516T>C]; XP_015838997.1:c.[19489T>C]; XP_015838996.1:c.[19501T>C]; XP_015839004.1:c.[19285T>C]; XP_015838998.1:c.[19516T>C]","XP_015839000.1:p.[Phe6506Leu]; XP_015839011.1:p.[Phe6467Leu]; XP_015839010.1:p.[Phe6404Leu]; XP_015838999.1:p.[Phe6492Leu]; XP_015839001.1:p.[Phe6481Leu]; XP_015839003.1:p.[Phe6443Leu]; XP_015839002.1:p.[Phe6467Leu]; XP_015839005.1:p.[Phe6404Leu]; XP_015839007.1:p.[Phe6506Leu]; XP_015839006.1:p.[Phe6506Leu]; XP_015839008.1:p.[Phe6404Leu]; XP_015839009.1:p.[Phe6506Leu]; XP_015838997.1:p.[Phe6497Leu]; XP_015838996.1:p.[Phe6501Leu]; XP_015839004.1:p.[Phe6429Leu]; XP_015838998.1:p.[Phe6506Leu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1627,"NC_007424.3",8130865,"SNV","C","G","Homozygous",27,27,100,1,8,20,0.29,38.26,28,28,14,18,null,1,1,"no","G/G","No",1,101.16,"XP_015838999.1:c.[17375G>C]; XP_015839010.1:c.[17111G>C]; XP_015839003.1:c.[17228G>C]; XP_015839009.1:c.[17417G>C]; XP_015839005.1:c.[17111G>C]; XP_015838996.1:c.[17402G>C]; XP_015839007.1:c.[17417G>C]; XP_015839008.1:c.[17111G>C]; XP_015839006.1:c.[17417G>C]; XP_015839004.1:c.[17186G>C]; XP_015839000.1:c.[17417G>C]; XP_015839001.1:c.[17342G>C]; XP_015838997.1:c.[17390G>C]; XP_015838998.1:c.[17417G>C]; XP_015839002.1:c.[17300G>C]; XP_015839011.1:c.[17300G>C]","XP_015838999.1:p.[Ser5792Thr]; XP_015839010.1:p.[Ser5704Thr]; XP_015839003.1:p.[Ser5743Thr]; XP_015839009.1:p.[Ser5806Thr]; XP_015839005.1:p.[Ser5704Thr]; XP_015838996.1:p.[Ser5801Thr]; XP_015839007.1:p.[Ser5806Thr]; XP_015839008.1:p.[Ser5704Thr]; XP_015839006.1:p.[Ser5806Thr]; XP_015839004.1:p.[Ser5729Thr]; XP_015839000.1:p.[Ser5806Thr]; XP_015839001.1:p.[Ser5781Thr]; XP_015838997.1:p.[Ser5797Thr]; XP_015838998.1:p.[Ser5806Thr]; XP_015839002.1:p.[Ser5767Thr]; XP_015839011.1:p.[Ser5767Thr]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1628,"NC_007424.3",8298201,"SNV","A","T","Homozygous",33,33,100,1,25,15,0.38,34.73,40,40,10,15,null,1,1,"no","T/T","No",1,120.81,"XP_008199895.1:c.2476T>A","XP_008199895.1:p.Ser826Thr","LOC654954",654954,null,"654954 [Gene Symbol: LOC654954] [Locus Tag: TcasGA2_TC010657] [Chromosome: LG9] [Map Location: ] [Description: disintegrin and metalloproteinase domain-containing protein 12] [Gene Type: protein-coding]","LOC654954; TcasGA2_TC010657"]
[1629,"NC_007424.3",8735963,"SNV","T","A","Homozygous",24,24,100,1,9,15,0.38,34.83,24,24,14,19,null,1,1,"no","A/A","No",1,93.74,"XP_968231.1:c.157A>T","XP_968231.1:p.Thr53Ser","LOC656623",656623,null,"656623 [Gene Symbol: LOC656623] [Locus Tag: TcasGA2_TC012005] [Chromosome: LG9] [Map Location: ] [Description: RING finger protein 10] [Gene Type: protein-coding]","LOC656623; TcasGA2_TC012005"]
[1630,"NC_007424.3",9205046,"SNV","C","T","Homozygous",26,26,100,1,14,18,0.44,36.85,32,32,14,19,null,1,1,"no","T/T","No",1,99.75,"XP_015839066.1:c.59518G>A","XP_015839066.1:p.Val19840Ile","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1631,"NC_007424.3","9206668..9206669","MNV","TC","GT","Homozygous",22,22,100,1,19,3,0.14,38.34,22,22,13,17,null,1,1,"no","GT/GT","No",1,200,"XP_015839066.1:c.58177_58178delGAinsAC","XP_015839066.1:p.Glu19393Thr","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1632,"NC_007424.3",9207043,"SNV","A","T","Homozygous",20,20,100,1,7,13,0.35,37.25,20,20,14,16,null,1,1,"no","T/T","No",1,81.7,"XP_015839066.1:c.57803T>A","XP_015839066.1:p.Phe19268Tyr","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1633,"NC_007424.3",9208682,"SNV","C","T","Homozygous",24,24,100,1,13,13,0.5,37.88,26,26,16,19,null,1,1,"no","T/T","No",1,93.73,"XP_015839066.1:c.56342G>A","XP_015839066.1:p.Arg18781Gln","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1634,"NC_007424.3",9219572,"SNV","G","C","Homozygous",22,22,100,1,8,15,0.35,39.09,23,23,14,12,null,1,1,"no","C/C","No",1,86.13,"XP_015839066.1:c.46412C>G","XP_015839066.1:p.Thr15471Arg","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1635,"NC_007424.3",9253969,"SNV","C","T","Homozygous",19,23,82.61,0.55,6,13,0.32,38.53,19,23,15,13,-2.11,0.94,0.98,"no","C/T","No",1,3.44,"XP_015839066.1:c.15403G>A","XP_015839066.1:p.Gly5135Ser","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1636,"NC_007424.3",10671234,"SNV","C","A","Homozygous",20,20,100,1,12,8,0.4,36.7,20,20,10,12,null,1,1,"no","A/A","No",1,81.7,"XP_008197964.1:c.[3880-1304G>T]; XP_015839160.1:c.[4105-1304G>T]; XP_015839168.1:c.[3667-1304G>T]; XP_008197958.1:c.[4105-1334G>T]; XP_015839165.1:c.[3811-1304G>T]; XP_008197961.1:c.[4021-1304G>T]; XP_008197956.1:c.[4102-1304G>T]; XP_008197949.1:c.[9026G>T]; XP_008197953.1:c.[4105-1304G>T]; XP_008197957.1:c.[4084-1304G>T]; XP_008197963.1:c.[3940-1304G>T]; XP_015839166.1:c.[3808-1304G>T]; XP_015839163.1:c.[4069-1304G>T]; XP_008197960.1:c.[4024-1304G>T]; XP_015839162.1:c.[4105-1304G>T]; XP_015839161.1:c.[4105-1304G>T]; XP_008197959.1:c.[4072-1304G>T]; XP_015839167.1:c.[3727-1304G>T]; XP_008197962.1:c.[4021-1304G>T]; XP_008197955.1:c.[4105-1304G>T]; XP_015839164.1:c.[3892-1304G>T]","XP_008197949.1:p.Arg3009Leu","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1637,"NC_007424.3",10672092,"SNV","T","C","Heterozygous",11,21,52.38,1,5,6,0.45,39,11,25,7,9,1.2,0.97,1,"no","C/T","No",1,81.43,"XP_008197963.1:c.[3940-2162A>G]; XP_015839167.1:c.[3727-2162A>G]; XP_008197955.1:c.[4105-2162A>G]; XP_008197964.1:c.[3880-2162A>G]; XP_008197961.1:c.[4021-2162A>G]; XP_008197956.1:c.[4102-2162A>G]; XP_015839160.1:c.[4105-2162A>G]; XP_008197949.1:c.[8168A>G]; XP_015839163.1:c.[4069-2162A>G]; XP_015839165.1:c.[3811-2162A>G]; XP_015839168.1:c.[3667-2162A>G]; XP_008197960.1:c.[4024-2162A>G]; XP_015839161.1:c.[4105-2162A>G]; XP_015839162.1:c.[4105-2162A>G]; XP_008197962.1:c.[4021-2162A>G]; XP_008197957.1:c.[4084-2162A>G]; XP_008197958.1:c.[4105-2192A>G]; XP_015839166.1:c.[3808-2162A>G]; XP_008197953.1:c.[4105-2162A>G]; XP_015839164.1:c.[3892-2162A>G]; XP_008197959.1:c.[4072-2162A>G]","XP_008197949.1:p.Gln2723Arg","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1638,"NC_007424.3",10673697,"SNV","G","C","Heterozygous",9,20,45,1,4,5,0.44,39.89,9,21,5,8,0.87,0.2,0.82,"no","C/G","No",1,71.64,"XP_015839161.1:c.[4105-3767C>G]; XP_008197962.1:c.[4021-3767C>G]; XP_015839163.1:c.[4069-3767C>G]; XP_008197949.1:c.[6563C>G]; XP_015839168.1:c.[3667-3767C>G]; XP_008197964.1:c.[3880-3767C>G]; XP_015839166.1:c.[3808-3767C>G]; XP_015839162.1:c.[4105-3767C>G]; XP_015839167.1:c.[3727-3767C>G]; XP_008197953.1:c.[4105-3767C>G]; XP_015839165.1:c.[3811-3767C>G]; XP_008197956.1:c.[4102-3767C>G]; XP_008197961.1:c.[4021-3767C>G]; XP_008197958.1:c.[4105-3797C>G]; XP_015839164.1:c.[3892-3767C>G]; XP_008197955.1:c.[4105-3767C>G]; XP_015839160.1:c.[4105-3767C>G]; XP_008197963.1:c.[3940-3767C>G]; XP_008197960.1:c.[4024-3767C>G]; XP_008197959.1:c.[4072-3767C>G]; XP_008197957.1:c.[4084-3767C>G]","XP_008197949.1:p.Pro2188Arg","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1639,"NC_007424.3",10673704,"SNV","T","C","Heterozygous",12,22,54.55,1,6,6,0.5,39.17,12,23,7,10,0.79,0.68,0.94,"no","C/T","No",1,78.76,"XP_015839163.1:c.[4069-3774A>G]; XP_008197957.1:c.[4084-3774A>G]; XP_015839166.1:c.[3808-3774A>G]; XP_008197961.1:c.[4021-3774A>G]; XP_015839162.1:c.[4105-3774A>G]; XP_008197956.1:c.[4102-3774A>G]; XP_008197959.1:c.[4072-3774A>G]; XP_015839161.1:c.[4105-3774A>G]; XP_008197963.1:c.[3940-3774A>G]; XP_015839168.1:c.[3667-3774A>G]; XP_008197962.1:c.[4021-3774A>G]; XP_008197958.1:c.[4105-3804A>G]; XP_008197964.1:c.[3880-3774A>G]; XP_015839167.1:c.[3727-3774A>G]; XP_008197955.1:c.[4105-3774A>G]; XP_008197953.1:c.[4105-3774A>G]; XP_015839164.1:c.[3892-3774A>G]; XP_008197960.1:c.[4024-3774A>G]; XP_015839165.1:c.[3811-3774A>G]; XP_015839160.1:c.[4105-3774A>G]; XP_008197949.1:c.[6556A>G]","XP_008197949.1:p.Met2186Val","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1640,"NC_007424.3",10673708,"SNV","T","A","Heterozygous",13,23,56.52,1,7,6,0.46,38.85,13,23,8,11,-0.59,0.83,0.95,"no","A/T","No",1,66.24,"XP_015839162.1:c.[4105-3778A>T]; XP_015839160.1:c.[4105-3778A>T]; XP_008197957.1:c.[4084-3778A>T]; XP_008197962.1:c.[4021-3778A>T]; XP_015839167.1:c.[3727-3778A>T]; XP_015839163.1:c.[4069-3778A>T]; XP_008197963.1:c.[3940-3778A>T]; XP_015839164.1:c.[3892-3778A>T]; XP_015839161.1:c.[4105-3778A>T]; XP_008197960.1:c.[4024-3778A>T]; XP_015839166.1:c.[3808-3778A>T]; XP_008197956.1:c.[4102-3778A>T]; XP_008197961.1:c.[4021-3778A>T]; XP_008197955.1:c.[4105-3778A>T]; XP_008197959.1:c.[4072-3778A>T]; XP_008197958.1:c.[4105-3808A>T]; XP_008197949.1:c.[6552A>T]; XP_008197953.1:c.[4105-3778A>T]; XP_015839165.1:c.[3811-3778A>T]; XP_015839168.1:c.[3667-3778A>T]; XP_008197964.1:c.[3880-3778A>T]","XP_008197949.1:p.Lys2184Asn","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1641,"NC_007424.3",10673946,"SNV","C","T","Homozygous",25,25,100,1,17,9,0.35,39.08,26,26,13,19,null,1,1,"no","T/T","No",1,96.74,"XP_015839161.1:c.[4105-4016G>A]; XP_015839166.1:c.[3808-4016G>A]; XP_008197957.1:c.[4084-4016G>A]; XP_015839162.1:c.[4105-4016G>A]; XP_015839168.1:c.[3667-4016G>A]; XP_008197960.1:c.[4024-4016G>A]; XP_015839160.1:c.[4105-4016G>A]; XP_015839167.1:c.[3727-4016G>A]; XP_008197963.1:c.[3940-4016G>A]; XP_008197964.1:c.[3880-4016G>A]; XP_015839165.1:c.[3811-4016G>A]; XP_008197958.1:c.[4105-4046G>A]; XP_008197956.1:c.[4102-4016G>A]; XP_015839164.1:c.[3892-4016G>A]; XP_008197953.1:c.[4105-4016G>A]; XP_008197962.1:c.[4021-4016G>A]; XP_008197949.1:c.[6314G>A]; XP_015839163.1:c.[4069-4016G>A]; XP_008197959.1:c.[4072-4016G>A]; XP_008197955.1:c.[4105-4016G>A]; XP_008197961.1:c.[4021-4016G>A]","XP_008197949.1:p.Gly2105Asp","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1642,"NC_007424.3","10675156..10675157","MNV","CC","AT","Heterozygous",11,20,55,1,6,5,0.45,40.41,11,20,6,6,null,0.56,0.95,"no","complex","No",1,200,"XP_015839165.1:c.[3810+5196_3810+5197delGGinsAT]; XP_008197956.1:c.[4101+5196_4101+5197delGGinsAT]; XP_008197959.1:c.[4071+5196_4071+5197delGGinsAT]; XP_008197961.1:c.[4020+5196_4020+5197delGGinsAT]; XP_015839167.1:c.[3726+5196_3726+5197delGGinsAT]; XP_008197962.1:c.[4020+5196_4020+5197delGGinsAT]; XP_008197953.1:c.[4104+5196_4104+5197delGGinsAT]; XP_015839168.1:c.[3666+5196_3666+5197delGGinsAT]; XP_015839163.1:c.[4068+5196_4068+5197delGGinsAT]; XP_008197955.1:c.[4104+5196_4104+5197delGGinsAT]; XP_015839162.1:c.[4104+5196_4104+5197delGGinsAT]; XP_008197957.1:c.[4083+5196_4083+5197delGGinsAT]; XP_008197949.1:c.[5103_5104delGGinsAT]; XP_008197960.1:c.[4023+5196_4023+5197delGGinsAT]; XP_015839164.1:c.[3891+5196_3891+5197delGGinsAT]; XP_015839160.1:c.[4104+5196_4104+5197delGGinsAT]; XP_015839161.1:c.[4104+5196_4104+5197delGGinsAT]; XP_008197963.1:c.[3939+5196_3939+5197delGGinsAT]; XP_008197964.1:c.[3879+5196_3879+5197delGGinsAT]; XP_008197958.1:c.[4104+5196_4104+5197delGGinsAT]; XP_015839166.1:c.[3807+5196_3807+5197delGGinsAT]","XP_008197949.1:p.Val1702Leu","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1643,"NC_007424.3",10683994,"SNV","T","C","Homozygous",21,23,91.3,1,11,15,0.42,36.48,26,29,10,16,null,1,1,"no","C/C","No",1,31.77,"XP_008197959.1:c.[3431A>G]; XP_015839162.1:c.[3464A>G]; XP_008197958.1:c.[3464A>G]; XP_008197953.1:c.[3464A>G]; XP_015839164.1:c.[3251A>G]; XP_015839166.1:c.[3167A>G]; XP_008197964.1:c.[3239A>G]; XP_008197960.1:c.[3383A>G]; XP_015839161.1:c.[3464A>G]; XP_015839160.1:c.[3464A>G]; XP_008197956.1:c.[3461A>G]; XP_015839165.1:c.[3170A>G]; XP_015839168.1:c.[3026A>G]; XP_008197955.1:c.[3464A>G]; XP_008197957.1:c.[3443A>G]; XP_008197961.1:c.[3380A>G]; XP_015839163.1:c.[3428A>G]; XP_008197962.1:c.[3380A>G]; XP_015839167.1:c.[3086A>G]; XP_008197963.1:c.[3299A>G]","XP_008197959.1:p.[Asn1144Ser]; XP_015839162.1:p.[Asn1155Ser]; XP_008197958.1:p.[Asn1155Ser]; XP_008197953.1:p.[Asn1155Ser]; XP_015839164.1:p.[Asn1084Ser]; XP_015839166.1:p.[Asn1056Ser]; XP_008197964.1:p.[Asn1080Ser]; XP_008197960.1:p.[Asn1128Ser]; XP_015839161.1:p.[Asn1155Ser]; XP_015839160.1:p.[Asn1155Ser]; XP_008197956.1:p.[Asn1154Ser]; XP_015839165.1:p.[Asn1057Ser]; XP_015839168.1:p.[Asn1009Ser]; XP_008197955.1:p.[Asn1155Ser]; XP_008197957.1:p.[Asn1148Ser]; XP_008197961.1:p.[Asn1127Ser]; XP_015839163.1:p.[Asn1143Ser]; XP_008197962.1:p.[Asn1127Ser]; XP_015839167.1:p.[Asn1029Ser]; XP_008197963.1:p.[Asn1100Ser]","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1644,"NC_007424.3",10950455,"SNV","A","C","Heterozygous",5,21,23.81,0.99,1,4,0.2,40.2,5,25,4,4,0.58,0.25,0.87,"no","A/C","No",1,18.71,"XP_008197972.1:c.1249A>C","XP_008197972.1:p.Ile417Leu","LOC655795, LOC100142013","655795 , 100142013","5-hydroxytryptamine receptor","655795 [Gene Symbol: LOC655795] [Locus Tag: TcasGA2_TC011960] [Chromosome: LG9] [Map Location: ] [Description: 5-hydroxytryptamine receptor] [Gene Type: protein-coding] || 100142013 [Gene Symbol: LOC100142013] [Locus Tag: TcasGA2_TC012519] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100142013] [Gene Type: protein-coding]","TcasGA2_TC011960; LOC655795 || LOC100142013; TcasGA2_TC012519"]
[1645,"NC_007424.3",10969689,"SNV","G","T","Homozygous",21,21,100,1,8,15,0.35,36.86,23,23,11,13,null,1,1,"no","T/T","No",1,84.7,"XP_008197974.1:c.[4323G>T]; XP_015838967.1:c.[4323G>T]; XP_015838965.1:c.[4323G>T]; XP_015838964.1:c.[4323G>T]; XP_015838966.1:c.[4323G>T]","XP_008197974.1:p.[Arg1441Ser]; XP_015838967.1:p.[Arg1441Ser]; XP_015838965.1:p.[Arg1441Ser]; XP_015838964.1:p.[Arg1441Ser]; XP_015838966.1:p.[Arg1441Ser]","LOC655795, LOC656624","655795 , 656624","5-hydroxytryptamine receptor","655795 [Gene Symbol: LOC655795] [Locus Tag: TcasGA2_TC011960] [Chromosome: LG9] [Map Location: ] [Description: 5-hydroxytryptamine receptor] [Gene Type: protein-coding] || 656624 [Gene Symbol: LOC656624] [Locus Tag: TcasGA2_TC012521] [Chromosome: LG9] [Map Location: ] [Description: protocadherin-like wing polarity protein stan] [Gene Type: protein-coding]","TcasGA2_TC011960; LOC655795 || TcasGA2_TC012521; LOC656624; stan"]
[1646,"NC_007424.3",10975196,"SNV","T","G","Homozygous",21,21,100,1,13,12,0.48,37.14,25,25,13,15,null,1,1,"no","G/G","No",1,83.1,"XP_008197974.1:c.[7694T>G]; XP_015838964.1:c.[7694T>G]; XP_015838967.1:c.[7694T>G]; XP_015838965.1:c.[7694T>G]; XP_015838966.1:c.[7694T>G]","XP_008197974.1:p.[Val2565Gly]; XP_015838964.1:p.[Val2565Gly]; XP_015838967.1:p.[Val2565Gly]; XP_015838965.1:p.[Val2565Gly]; XP_015838966.1:p.[Val2565Gly]","LOC655795, LOC656624","655795 , 656624","5-hydroxytryptamine receptor","655795 [Gene Symbol: LOC655795] [Locus Tag: TcasGA2_TC011960] [Chromosome: LG9] [Map Location: ] [Description: 5-hydroxytryptamine receptor] [Gene Type: protein-coding] || 656624 [Gene Symbol: LOC656624] [Locus Tag: TcasGA2_TC012521] [Chromosome: LG9] [Map Location: ] [Description: protocadherin-like wing polarity protein stan] [Gene Type: protein-coding]","TcasGA2_TC011960; LOC655795 || TcasGA2_TC012521; LOC656624; stan"]
[1647,"NC_007424.3",10975212,"SNV","A","T","Homozygous",21,21,100,1,13,9,0.41,34.48,22,22,11,15,null,1,1,"no","T/T","No",1,81.7,"XP_015838965.1:c.[7710A>T]; XP_015838967.1:c.[7710A>T]; XP_015838966.1:c.[7710A>T]; XP_015838964.1:c.[7710A>T]; XP_008197974.1:c.[7710A>T]","XP_015838965.1:p.[Glu2570Asp]; XP_015838967.1:p.[Glu2570Asp]; XP_015838966.1:p.[Glu2570Asp]; XP_015838964.1:p.[Glu2570Asp]; XP_008197974.1:p.[Glu2570Asp]","LOC655795, LOC656624","655795 , 656624","5-hydroxytryptamine receptor","655795 [Gene Symbol: LOC655795] [Locus Tag: TcasGA2_TC011960] [Chromosome: LG9] [Map Location: ] [Description: 5-hydroxytryptamine receptor] [Gene Type: protein-coding] || 656624 [Gene Symbol: LOC656624] [Locus Tag: TcasGA2_TC012521] [Chromosome: LG9] [Map Location: ] [Description: protocadherin-like wing polarity protein stan] [Gene Type: protein-coding]","TcasGA2_TC011960; LOC655795 || TcasGA2_TC012521; LOC656624; stan"]
[1648,"NC_007424.3",10976463,"SNV","C","G","Heterozygous",16,23,69.57,1,12,8,0.4,37.62,20,27,10,12,0.1,0.99,0.97,"no","C/G","No",1,37.71,"XP_015838965.1:c.[8703C>G]; XP_015838966.1:c.[8703C>G]; XP_008197974.1:c.[8703C>G]; XP_015838964.1:c.[8703C>G]; XP_015838967.1:c.[8703C>G]","XP_015838965.1:p.[Ile2901Met]; XP_015838966.1:p.[Ile2901Met]; XP_008197974.1:p.[Ile2901Met]; XP_015838964.1:p.[Ile2901Met]; XP_015838967.1:p.[Ile2901Met]","LOC655795, LOC656624","655795 , 656624","5-hydroxytryptamine receptor","655795 [Gene Symbol: LOC655795] [Locus Tag: TcasGA2_TC011960] [Chromosome: LG9] [Map Location: ] [Description: 5-hydroxytryptamine receptor] [Gene Type: protein-coding] || 656624 [Gene Symbol: LOC656624] [Locus Tag: TcasGA2_TC012521] [Chromosome: LG9] [Map Location: ] [Description: protocadherin-like wing polarity protein stan] [Gene Type: protein-coding]","TcasGA2_TC011960; LOC655795 || TcasGA2_TC012521; LOC656624; stan"]
[1649,"NC_007424.3",10985052,"SNV","C","T","Homozygous",23,23,100,1,13,13,0.5,36.04,26,26,15,15,null,1,1,"no","T/T","No",1,90.72,"XP_015838972.1:c.1462G>A","XP_015838972.1:p.Ala488Thr","LOC656787",656787,null,"656787 [Gene Symbol: LOC656787] [Locus Tag: TcasGA2_TC011954] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC656787] [Gene Type: protein-coding]","LOC656787; TcasGA2_TC011954"]
[1650,"NC_007424.3",11010684,"SNV","C","G","Homozygous",24,24,100,1,19,10,0.34,37.54,29,29,15,17,null,1,1,"no","G/G","No",1,92.13,"XP_015838978.1:c.87C>G","XP_015838978.1:p.Asn29Lys","LOC656236, LOC103314256","656236 , 103314256",null,"656236 [Gene Symbol: LOC656236] [Locus Tag: TcasGA2_TC011953] [Chromosome: LG9] [Map Location: ] [Description: macrophage erythroblast attacher] [Gene Type: protein-coding] || 103314256 [Gene Symbol: LOC103314256] [Locus Tag: TcasGA2_TC012525] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314256] [Gene Type: protein-coding]","LOC656236; TcasGA2_TC011953 || TcasGA2_TC012525; LOC103314256"]
[1651,"NC_007424.3",11031504,"SNV","C","T","Heterozygous",11,23,47.83,1,5,6,0.45,37.55,11,23,5,5,0.18,0.22,0.5,"no","C/T","No",1,88.66,"XP_969136.1:c.1025C>T","XP_969136.1:p.Pro342Leu","LOC656236, LOC657592","656236 , 657592",null,"656236 [Gene Symbol: LOC656236] [Locus Tag: TcasGA2_TC011953] [Chromosome: LG9] [Map Location: ] [Description: macrophage erythroblast attacher] [Gene Type: protein-coding] || 657592 [Gene Symbol: LOC657592] [Locus Tag: TcasGA2_TC012530] [Chromosome: LG9] [Map Location: ] [Description: aminoacylase-1] [Gene Type: protein-coding]","LOC656236; TcasGA2_TC011953 || LOC657592; TcasGA2_TC012530"]
[1652,"NC_007424.3",11092146,"SNV","C","A","Homozygous",21,21,100,1,7,16,0.3,38.52,23,23,12,11,null,1,1,"no","A/A","No",1,84.69,"XP_015838876.1:c.[1807+1002C>A]; XP_015838886.1:c.[1802-319C>A]; XP_015838909.1:c.[1822C>A]; XP_015838894.1:c.[1801+1002C>A]; XP_015838892.1:c.[1801+1002C>A]; XP_015838883.1:c.[1804+1002C>A]; XP_015838902.1:c.[1801+1002C>A]; XP_015838910.1:c.[1804+1002C>A]; XP_015838882.1:c.[1804+1002C>A]; XP_015838899.1:c.[1801+1002C>A]; XP_015838880.1:c.[1804+1002C>A]; XP_015838874.1:c.[1807+1002C>A]; XP_015838919.1:c.[2086+49C>A]; XP_015838893.1:c.[1801+1002C>A]; XP_015838901.1:c.[1801+1002C>A]; XP_015838908.1:c.[1801+1002C>A]; XP_015838904.1:c.[2086+49C>A]; XP_015838900.1:c.[1816C>A]; XP_015838918.1:c.[1801+1002C>A]; XP_015838916.1:c.[1801+1002C>A]; XP_015838922.1:c.[1802-319C>A]; XP_015838879.1:c.[1804+1002C>A]; XP_015838907.1:c.[1798+1002C>A]; XP_015838884.1:c.[1804+1002C>A]; XP_015838903.1:c.[2086+49C>A]; XP_015838897.1:c.[1801+1002C>A]; XP_015838881.1:c.[1804+1002C>A]; XP_015838912.1:c.[1801+1002C>A]; XP_015838895.1:c.[2089+49C>A]; XP_015838885.1:c.[1804+1002C>A]; XP_015838891.1:c.[1801+1002C>A]; XP_015838915.1:c.[1801+1002C>A]; XP_015838878.1:c.[1805-319C>A]; XP_015838888.1:c.[1801+1002C>A]; XP_015838921.1:c.[1801+1002C>A]; XP_015838911.1:c.[1801+1002C>A]; XP_015838890.1:c.[1801+1002C>A]; XP_015838889.1:c.[1816C>A]; XP_015838873.1:c.[1810+1002C>A]; XP_015838877.1:c.[1807+1002C>A]; XP_015838920.1:c.[1816C>A]; XP_015838906.1:c.[2086+49C>A]; XP_015838917.1:c.[1816C>A]; NP_001107841.1:c.[1816C>A]; XP_015838896.1:c.[1801+1002C>A]; XP_015838875.1:c.[1807+1002C>A]; XP_015838913.1:c.[2089+49C>A]; XP_015838898.1:c.[1801+1002C>A]; XP_015838914.1:c.[1816C>A]; XP_015838905.1:c.[1801+1002C>A]; XP_015838887.1:c.[1801+1002C>A]","XP_015838909.1:p.[Leu608Ile]; XP_015838900.1:p.[Leu606Ile]; XP_015838889.1:p.[Leu606Ile]; XP_015838920.1:p.[Leu606Ile]; XP_015838917.1:p.[Leu606Ile]; NP_001107841.1:p.[Leu606Ile]; XP_015838914.1:p.[Leu606Ile]","Dscam",652946,"Down syndrome cell adhesion molecule","652946 [Gene Symbol: Dscam] [Locus Tag: TcasGA2_TC012539] [Chromosome: LG9] [Map Location: ] [Description: Down syndrome cell adhesion molecule] [Gene Type: protein-coding]","TcasGA2_TC012539; Dscam"]
[1653,"NC_007424.3",11095131,"SNV","A","C","Heterozygous",14,22,63.64,1,10,7,0.41,37.36,17,26,8,8,-0.96,0.57,1,"no","A/C","No",1,49.81,"XP_015838879.1:c.[1804+3987A>C]; XP_015838876.1:c.[1807+3987A>C]; XP_015838874.1:c.[1808-3714A>C]; XP_015838893.1:c.[1801+3987A>C]; XP_015838883.1:c.[1804+3987A>C]; XP_015838913.1:c.[2089+3034A>C]; XP_015838917.1:c.[2089+2712A>C]; XP_015838914.1:c.[2089+2712A>C]; XP_015838904.1:c.[2086+3034A>C]; NP_001107841.1:c.[2089+2712A>C]; XP_015838908.1:c.[1802-2716A>C]; XP_015838882.1:c.[2092+680A>C]; XP_015838911.1:c.[1802-1017A>C]; XP_015838873.1:c.[1811-657A>C]; XP_015838886.1:c.[2089+2379A>C]; XP_015838915.1:c.[2089+680A>C]; XP_015838909.1:c.[2095+2712A>C]; XP_015838922.1:c.[2089+2379A>C]; XP_015838892.1:c.[1871A>C]; XP_015838920.1:c.[2089+2712A>C]; XP_015838895.1:c.[2089+3034A>C]; XP_015838885.1:c.[1805-3714A>C]; XP_015838884.1:c.[1805-3714A>C]; XP_015838878.1:c.[2092+2379A>C]; XP_015838916.1:c.[1801+3987A>C]; XP_015838889.1:c.[2089+2712A>C]; XP_015838907.1:c.[1868A>C]; XP_015838887.1:c.[1801+3987A>C]; XP_015838902.1:c.[2089+680A>C]; XP_015838894.1:c.[1801+3987A>C]; XP_015838903.1:c.[2086+3034A>C]; XP_015838905.1:c.[1802-3362A>C]; XP_015838921.1:c.[1801+3987A>C]; XP_015838877.1:c.[1807+3987A>C]; XP_015838910.1:c.[1804+3987A>C]; XP_015838898.1:c.[1801+3987A>C]; XP_015838890.1:c.[1802-2396A>C]; XP_015838896.1:c.[1801+3987A>C]; XP_015838901.1:c.[1802-1017A>C]; XP_015838900.1:c.[2089+2712A>C]; XP_015838906.1:c.[2086+3034A>C]; XP_015838918.1:c.[1802-3714A>C]; XP_015838880.1:c.[1874A>C]; XP_015838875.1:c.[1808-2396A>C]; XP_015838912.1:c.[1801+3987A>C]; XP_015838888.1:c.[1802-2396A>C]; XP_015838891.1:c.[1802-2396A>C]; XP_015838899.1:c.[1802-3714A>C]; XP_015838897.1:c.[1801+3987A>C]; XP_015838919.1:c.[2086+3034A>C]; XP_015838881.1:c.[1804+3987A>C]","XP_015838892.1:p.[Asn624Thr]; XP_015838907.1:p.[Asn623Thr]; XP_015838880.1:p.[Asn625Thr]","Dscam",652946,"Down syndrome cell adhesion molecule","652946 [Gene Symbol: Dscam] [Locus Tag: TcasGA2_TC012539] [Chromosome: LG9] [Map Location: ] [Description: Down syndrome cell adhesion molecule] [Gene Type: protein-coding]","TcasGA2_TC012539; Dscam"]
[1654,"NC_007424.3",11196258,"SNV","G","C","Homozygous",21,21,100,1,6,18,0.25,38,24,24,10,11,null,1,1,"no","C/C","No",1,83.12,"XP_015839343.1:c.86G>C","XP_015839343.1:p.Ser29Thr","LOC659199",659199,null,"659199 [Gene Symbol: LOC659199] [Locus Tag: TcasGA2_TC012544] [Chromosome: LG9] [Map Location: ] [Description: tetratricopeptide repeat protein 8] [Gene Type: protein-coding]","LOC659199; TcasGA2_TC012544"]
[1655,"NC_007424.3",11200063,"SNV","G","A","Heterozygous",11,21,52.38,1,8,4,0.33,37,12,22,8,9,-1.02,0.99,0.98,"no","A/G","No",1,82.51,"XP_015839343.1:c.1288G>A","XP_015839343.1:p.Ala430Thr","LOC659199",659199,null,"659199 [Gene Symbol: LOC659199] [Locus Tag: TcasGA2_TC012544] [Chromosome: LG9] [Map Location: ] [Description: tetratricopeptide repeat protein 8] [Gene Type: protein-coding]","LOC659199; TcasGA2_TC012544"]
[1656,"NC_007424.3",11288765,"SNV","A","G","Heterozygous",5,20,25,0.99,2,3,0.4,37.4,5,21,3,4,-0.22,0.19,0.5,"no","A/G","No",1,21.77,"XP_015839051.1:c.[1802A>G]; XP_015839050.1:c.[1802A>G]","XP_015839051.1:p.[Lys601Arg]; XP_015839050.1:p.[Lys601Arg]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1657,"NC_007424.3",11293114,"SNV","T","C","Heterozygous",10,20,50,1,2,9,0.18,38.2,11,23,6,6,-0.15,0.67,1,"no","C/T","No",1,81.95,"XP_015839051.1:c.[3857T>C]; XP_015839050.1:c.[3857T>C]","XP_015839051.1:p.[Val1286Ala]; XP_015839050.1:p.[Val1286Ala]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1658,"NC_007424.3",11299373,"SNV","A","C","Homozygous",21,21,100,1,16,5,0.24,38.81,21,21,10,14,null,1,1,"no","C/C","No",1,83.13,"XP_015839051.1:c.[5322A>C]; XP_015839050.1:c.[5325A>C]","XP_015839051.1:p.[Lys1774Asn]; XP_015839050.1:p.[Lys1775Asn]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1659,"NC_007424.3",11433239,"SNV","A","G","Homozygous",21,21,100,1,17,8,0.32,35.29,25,25,10,11,null,1,1,"no","G/G","No",1,83.1,"XP_015839300.1:c.[1465T>C]; XP_015839305.1:c.[1465T>C]; XP_015839304.1:c.[1273T>C]; XP_015839303.1:c.[1423T>C]; XP_015839306.1:c.[1465T>C]; XP_015839301.1:c.[1465T>C]; XP_015839302.1:c.[1465T>C]","XP_015839300.1:p.[Ser489Pro]; XP_015839305.1:p.[Ser489Pro]; XP_015839304.1:p.[Ser425Pro]; XP_015839303.1:p.[Ser475Pro]; XP_015839306.1:p.[Ser489Pro]; XP_015839301.1:p.[Ser489Pro]; XP_015839302.1:p.[Ser489Pro]","LOC660562",660562,null,"660562 [Gene Symbol: LOC660562] [Locus Tag: TcasGA2_TC011933] [Chromosome: LG9] [Map Location: ] [Description: rho GTPase-activating protein 100F] [Gene Type: protein-coding]","LOC660562; TcasGA2_TC011933"]
[1660,"NC_007424.3",11511545,"SNV","C","G","Homozygous",23,28,82.14,0.6,15,12,0.44,37.26,27,32,10,12,-0.18,0.99,1,"no","G/G","No",1,3.96,"XP_972498.1:c.630G>C","XP_972498.1:p.Glu210Asp","LOC661230",661230,null,"661230 [Gene Symbol: LOC661230] [Locus Tag: TcasGA2_TC011929] [Chromosome: LG9] [Map Location: ] [Description: histone H2A deubiquitinase MYSM1] [Gene Type: protein-coding]","LOC661230; TcasGA2_TC011929"]
[1661,"NC_007424.3",11597886,"SNV","A","G","Heterozygous",7,23,30.43,1,4,3,0.43,38.71,7,23,3,5,1.04,0.31,0.42,"no","A/G","No",1,38.94,"XP_008198032.1:c.[790A>G]; XP_008198034.1:c.[30-3590T>C]","XP_008198032.1:p.Arg264Gly","LOC661613, LOC103314270","661613 , 103314270",null,"661613 [Gene Symbol: LOC661613] [Locus Tag: TcasGA2_TC011926] [Chromosome: LG9] [Map Location: ] [Description: rap guanine nucleotide exchange factor 4] [Gene Type: protein-coding] || 103314270 [Gene Symbol: LOC103314270] [Locus Tag: TcasGA2_TC012570] [Chromosome: LG9] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","LOC661613; TcasGA2_TC011926 || LOC103314270; TcasGA2_TC012570"]
[1662,"NC_007424.3",11597888,"SNV","G","C","Heterozygous",16,23,69.57,1,2,14,0.12,36.19,16,23,9,9,-1.4,0.65,0.72,"no","C/G","No",1,37.82,"XP_008198032.1:c.[792G>C]; XP_008198034.1:c.[30-3592C>G]","XP_008198032.1:p.Arg264Ser","LOC661613, LOC103314270","661613 , 103314270",null,"661613 [Gene Symbol: LOC661613] [Locus Tag: TcasGA2_TC011926] [Chromosome: LG9] [Map Location: ] [Description: rap guanine nucleotide exchange factor 4] [Gene Type: protein-coding] || 103314270 [Gene Symbol: LOC103314270] [Locus Tag: TcasGA2_TC012570] [Chromosome: LG9] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","LOC661613; TcasGA2_TC011926 || LOC103314270; TcasGA2_TC012570"]
[1663,"NC_007424.3",11597892,"SNV","C","T","Heterozygous",18,25,72,1,2,16,0.11,37.44,18,25,9,10,-1.15,0.9,0.7,"no","C/T","No",1,33.54,"XP_008198032.1:c.[796C>T]; XP_008198034.1:c.[30-3596G>A]","XP_008198032.1:p.Pro266Ser","LOC661613, LOC103314270","661613 , 103314270",null,"661613 [Gene Symbol: LOC661613] [Locus Tag: TcasGA2_TC011926] [Chromosome: LG9] [Map Location: ] [Description: rap guanine nucleotide exchange factor 4] [Gene Type: protein-coding] || 103314270 [Gene Symbol: LOC103314270] [Locus Tag: TcasGA2_TC012570] [Chromosome: LG9] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","LOC661613; TcasGA2_TC011926 || LOC103314270; TcasGA2_TC012570"]
[1664,"NC_007424.3",11655747,"SNV","C","T","Heterozygous",15,27,55.56,1,3,12,0.2,38.4,15,29,6,8,-0.37,0.84,1,"no","C/T","No",1,91.75,"XP_008198048.1:c.[1280G>A]; XP_008198047.1:c.[1280G>A]","XP_008198048.1:p.[Ser427Asn]; XP_008198047.1:p.[Ser427Asn]","LOC662279",662279,null,"662279 [Gene Symbol: LOC662279] [Locus Tag: TcasGA2_TC011918] [Chromosome: LG9] [Map Location: ] [Description: type I inositol 1,4,5-trisphosphate 5-phosphatase] [Gene Type: protein-coding]","TcasGA2_TC011918; LOC662279"]
[1665,"NC_007424.3",11731985,"SNV","C","T","Heterozygous",5,20,25,0.99,1,5,0.17,36.4,6,23,3,3,-1.09,0.13,0.6,"no","C/T","No",1,20.86,"XP_976427.1:c.1501C>T","XP_976427.1:p.Pro501Ser","LOC662593",662593,null,"662593 [Gene Symbol: LOC662593] [Locus Tag: TcasGA2_TC012586] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC662593] [Gene Type: protein-coding]","LOC662593; TcasGA2_TC012586"]
[1666,"NC_007424.3",11741659,"SNV","C","T","Heterozygous",16,24,66.67,1,13,6,0.32,36.88,19,27,10,12,-1.26,0.92,0.95,"no","C/T","No",1,49.08,"XP_008198059.1:c.[1991G>A]; XP_015839088.1:c.[1910G>A]; XP_008198060.1:c.[1991G>A]","XP_008198059.1:p.[Arg664Lys]; XP_015839088.1:p.[Arg637Lys]; XP_008198060.1:p.[Arg664Lys]","LOC662720",662720,null,"662720 [Gene Symbol: LOC662720] [Locus Tag: TcasGA2_TC011909] [Chromosome: LG9] [Map Location: ] [Description: glutamate receptor-interacting protein 1] [Gene Type: protein-coding]","LOC662720; TcasGA2_TC011909"]
[1667,"NC_007424.3",11751543,"SNV","T","G","Heterozygous",9,22,40.91,1,5,4,0.44,38.22,9,22,6,7,0.47,0.34,0.78,"no","G/T","No",1,66.81,"XP_973953.2:c.22T>G","XP_973953.2:p.Phe8Val","LOC662783",662783,null,"662783 [Gene Symbol: LOC662783] [Locus Tag: TcasGA2_TC012587] [Chromosome: LG9] [Map Location: ] [Description: probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial] [Gene Type: protein-coding]","LOC662783; TcasGA2_TC012587"]
[1668,"NC_007424.3",11955436,"SNV","A","G","Homozygous",22,22,100,1,9,13,0.41,37.86,22,22,11,15,null,1,1,"no","G/G","No",1,86.11,"XP_008198080.1:c.[2942T>C]; XP_974291.2:c.[2720T>C]","XP_008198080.1:p.[Leu981Pro]; XP_974291.2:p.[Leu907Pro]","LOC663138",663138,null,"663138 [Gene Symbol: LOC663138] [Locus Tag: TcasGA2_TC030617] [Chromosome: LG9] [Map Location: ] [Description: phosphatidylinositide phosphatase SAC2] [Gene Type: protein-coding]","TcasGA2_TC030617; LOC663138"]
[1669,"NC_007424.3",11965476,"SNV","A","G","Heterozygous",9,23,39.13,1,5,4,0.44,37.67,9,23,6,7,0.41,0.69,1,"no","A/G","No",1,64.47,"XP_008198081.1:c.106A>G","XP_008198081.1:p.Met36Val","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1670,"NC_007424.3",11965561,"SNV","A","G","Homozygous",30,30,100,1,20,13,0.39,37.47,33,33,16,19,null,1,1,"no","G/G","No",1,110.18,"XP_008198081.1:c.142A>G","XP_008198081.1:p.Ile48Val","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1671,"NC_007424.3",11965673,"SNV","C","G","Homozygous",22,22,100,1,10,13,0.43,38,23,23,11,13,null,1,1,"no","G/G","No",1,86.11,"XP_008198081.1:c.254C>G","XP_008198081.1:p.Thr85Ser","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1672,"NC_007424.3",11965682,"SNV","A","C","Homozygous",22,22,100,1,12,14,0.46,37.95,26,26,12,13,null,1,1,"no","C/C","No",1,86.14,"XP_008198081.1:c.263A>C","XP_008198081.1:p.Lys88Thr","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1673,"NC_007424.3",11965694,"SNV","T","C","Heterozygous",21,30,70,1,12,11,0.48,38.31,23,35,13,16,null,0.8,1,"no","complex","No",1,200,"XP_008198081.1:c.275T>C","XP_008198081.1:p.Met92Thr","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1674,"NC_007424.3","11965694..11965695","MNV","TG","CA","Heterozygous",9,30,30,1,5,7,0.42,35.77,12,35,6,7,null,0.66,0.97,"no","complex","No",1,200,"XP_008198081.1:c.275_276delTGinsCA","XP_008198081.1:p.Met92Thr","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1675,"NC_007424.3",11965735,"SNV","A","G","Heterozygous",19,29,65.52,1,15,5,0.25,38,20,32,11,13,-0.76,0.54,0.57,"no","complex","No",1,200,"XP_008198081.1:c.316A>G","XP_008198081.1:p.Ile106Val","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1676,"NC_007424.3",11965811,"SNV","A","G","Heterozygous",5,22,22.73,0.98,0,5,0,40.2,5,22,3,3,1.88,0.23,0.74,"no","A/G","No",1,16.31,"XP_008198081.1:c.392A>G","XP_008198081.1:p.Glu131Gly","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1677,"NC_007424.3",11965870,"SNV","T","G","Homozygous",33,33,100,1,14,20,0.41,38.39,34,34,19,19,null,1,1,"no","G/G","No",1,119.22,"XP_008198081.1:c.402T>G","XP_008198081.1:p.Asp134Glu","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1678,"NC_007424.3",11965893,"SNV","A","G","Heterozygous",20,25,80,0.83,11,11,0.5,38.1,22,27,13,14,0.58,0.97,1,"no","A/G","No",1,7.81,"XP_008198081.1:c.425A>G","XP_008198081.1:p.Lys142Arg","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1679,"NC_007424.3",12131198,"SNV","C","G","Heterozygous",16,22,72.73,1,8,9,0.47,35.75,17,25,13,10,0,0.99,1,"no","C/G","No",1,30.57,"XP_015838955.1:c.122C>G","XP_015838955.1:p.Ala41Gly","LOC107398644",107398644,null,"107398644 [Gene Symbol: LOC107398644] [Locus Tag: TcasGA2_TC034400] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC107398644] [Gene Type: protein-coding]","LOC107398644; TcasGA2_TC034400"]
[1680,"NC_007424.3",12137887,"SNV","A","T","Heterozygous",15,21,71.43,1,8,7,0.47,37.6,15,21,7,8,-1.13,0.88,0.83,"no","A/T","No",1,30.59,"XP_974391.1:c.982A>T","XP_974391.1:p.Thr328Ser","LOC663241",663241,null,"663241 [Gene Symbol: LOC663241] [Locus Tag: TcasGA2_TC012611] [Chromosome: LG9] [Map Location: ] [Description: dynein assembly factor 3, axonemal homolog] [Gene Type: protein-coding]","TcasGA2_TC012611; LOC663241"]
[1681,"NC_007424.3",12141425,"SNV","C","A","Heterozygous",10,21,47.62,1,8,2,0.2,35.5,10,22,7,8,-1.2,0.35,0.89,"no","A/C","No",1,78.06,"XP_974410.1:c.64G>T","XP_974410.1:p.Ala22Ser","LOC663261",663261,null,"663261 [Gene Symbol: LOC663261] [Locus Tag: TcasGA2_TC011896] [Chromosome: LG9] [Map Location: ] [Description: probable 28S rRNA (cytosine-C(5))-methyltransferase] [Gene Type: protein-coding]","TcasGA2_TC011896; LOC663261"]
[1682,"NC_007424.3",12141746,"SNV","T","C","Heterozygous",14,20,70,1,6,8,0.43,38.5,14,26,6,10,1.69,0.94,1,"no","C/T","No",1,33.43,"XP_008198084.1:c.[1891A>G]; XP_008198085.1:c.[1798A>G]","XP_008198084.1:p.[Ile631Val]; XP_008198085.1:p.[Ile600Val]","LOC663280",663280,null,"663280 [Gene Symbol: LOC663280] [Locus Tag: TcasGA2_TC011895] [Chromosome: LG9] [Map Location: ] [Description: probable receptor-like protein kinase At5g18500] [Gene Type: protein-coding]","TcasGA2_TC011895; LOC663280"]
[1683,"NC_007424.3",12143167,"SNV","A","G","Homozygous",20,20,100,1,9,12,0.43,36.4,21,21,12,12,null,1,1,"no","G/G","No",1,80.09,"XP_008198085.1:c.[686T>C]; XP_008198086.1:c.[779T>C]; XP_008198084.1:c.[779T>C]","XP_008198085.1:p.[Val229Ala]; XP_008198086.1:p.[Val260Ala]; XP_008198084.1:p.[Val260Ala]","LOC663280",663280,null,"663280 [Gene Symbol: LOC663280] [Locus Tag: TcasGA2_TC011895] [Chromosome: LG9] [Map Location: ] [Description: probable receptor-like protein kinase At5g18500] [Gene Type: protein-coding]","TcasGA2_TC011895; LOC663280"]
[1684,"NC_007424.3",12143185,"SNV","G","A","Heterozygous",8,20,40,1,6,3,0.33,37.25,9,21,5,6,0.62,0.82,0.64,"no","A/G","No",1,59.06,"XP_008198086.1:c.[761C>T]; XP_008198085.1:c.[668C>T]; XP_008198084.1:c.[761C>T]","XP_008198086.1:p.[Ala254Val]; XP_008198085.1:p.[Ala223Val]; XP_008198084.1:p.[Ala254Val]","LOC663280",663280,null,"663280 [Gene Symbol: LOC663280] [Locus Tag: TcasGA2_TC011895] [Chromosome: LG9] [Map Location: ] [Description: probable receptor-like protein kinase At5g18500] [Gene Type: protein-coding]","TcasGA2_TC011895; LOC663280"]
[1685,"NC_007424.3","12195962..12195963","MNV","GC","CA","Heterozygous",11,23,47.83,1,11,0,0,35.05,11,24,6,9,-3.31,0.11,0.55,"no","complex","No",1,200,"XP_008198101.1:c.[2385_2386delGCinsCA]; XP_015839035.1:c.[2385_2386delGCinsCA]; XP_008198103.1:c.[2385_2386delGCinsCA]","XP_008198101.1:p.[Pro796Thr]; XP_015839035.1:p.[Pro796Thr]; XP_008198103.1:p.[Pro796Thr]","LOC663427",663427,null,"663427 [Gene Symbol: LOC663427] [Locus Tag: TcasGA2_TC012616] [Chromosome: LG9] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase N2] [Gene Type: protein-coding]","LOC663427; TcasGA2_TC012616"]
[1686,"NC_007424.3",12225989,"SNV","T","A","Heterozygous",12,21,57.14,1,9,3,0.25,36.83,12,21,9,8,-1.42,0.86,0.96,"no","A/T","No",1,69.03,"XP_015838956.1:c.578A>T","XP_015838956.1:p.Gln193Leu","LOC103314281",103314281,null,"103314281 [Gene Symbol: LOC103314281] [Locus Tag: TcasGA2_TC011887] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314281] [Gene Type: protein-coding]","TcasGA2_TC011887; LOC103314281"]
[1687,"NC_007424.3",12227739,"SNV","C","G","Homozygous",21,21,100,1,6,18,0.25,36.57,24,24,12,13,null,1,1,"no","G/G","No",1,83.1,"XP_974756.1:c.44C>G","XP_974756.1:p.Thr15Ser","LOC663625",663625,null,"663625 [Gene Symbol: LOC663625] [Locus Tag: TcasGA2_TC012624] [Chromosome: LG9] [Map Location: ] [Description: transmembrane emp24 domain-containing protein A] [Gene Type: protein-coding]","TcasGA2_TC012624; LOC663625"]
[1688,"NC_007424.3",12235240,"SNV","G","A","Heterozygous",11,21,52.38,1,6,5,0.45,37.36,11,21,5,8,-1.55,0.78,0.99,"no","A/G","No",1,82.51,"XP_008198112.1:c.[1045C>T]; XP_008198111.1:c.[1045C>T]","XP_008198112.1:p.[Pro349Ser]; XP_008198111.1:p.[Pro349Ser]","LOC663644",663644,null,"663644 [Gene Symbol: LOC663644] [Locus Tag: TcasGA2_TC011886] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663644] [Gene Type: protein-coding]","LOC663644; TcasGA2_TC011886"]
[1689,"NC_007424.3",12240433,"SNV","T","A","Heterozygous",7,21,33.33,1,2,5,0.29,38,7,24,5,6,1.38,0.62,0.73,"no","A/T","No",1,43.38,"XP_974799.1:c.448T>A","XP_974799.1:p.Phe150Ile","LOC663670",663670,null,"663670 [Gene Symbol: LOC663670] [Locus Tag: TcasGA2_TC012625] [Chromosome: LG9] [Map Location: ] [Description: Bardet-Biedl syndrome 1 protein] [Gene Type: protein-coding]","LOC663670; TcasGA2_TC012625"]
[1690,"NC_007424.3","12248494..12248496","Deletion","TGG","-","Heterozygous",11,27,40.74,1,5,7,0.42,39,12,30,8,8,0.04,0.55,1,"no","complex","No",1,200,"XP_015839057.1:c.[3795_3797delCCA]; XP_974847.2:c.[3798_3800delCCA]","XP_015839057.1:p.[His1265del]; XP_974847.2:p.[His1266del]","LOC663720",663720,null,"663720 [Gene Symbol: LOC663720] [Locus Tag: TcasGA2_TC034408] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663720] [Gene Type: protein-coding]","TcasGA2_TC034408; LOC663720"]
[1691,"NC_007424.3",12250144,"SNV","A","C","Heterozygous",7,22,31.82,1,4,4,0.5,39.14,8,27,5,6,0.56,0.29,1,"no","A/C","No",1,41.43,"XP_974847.2:c.[2196T>G]; XP_015839057.1:c.[2193T>G]","XP_974847.2:p.[His732Gln]; XP_015839057.1:p.[His731Gln]","LOC663720",663720,null,"663720 [Gene Symbol: LOC663720] [Locus Tag: TcasGA2_TC034408] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663720] [Gene Type: protein-coding]","TcasGA2_TC034408; LOC663720"]
[1692,"NC_007424.3",12251632,"SNV","T","G","Heterozygous",10,27,37.04,1,3,7,0.3,40.9,10,29,4,5,2.59,0.31,0.75,"no","G/T","No",1,65.65,"XP_974847.2:c.[854A>C]; XP_015839057.1:c.[851A>C]","XP_974847.2:p.[Lys285Thr]; XP_015839057.1:p.[Lys284Thr]","LOC663720",663720,null,"663720 [Gene Symbol: LOC663720] [Locus Tag: TcasGA2_TC034408] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663720] [Gene Type: protein-coding]","TcasGA2_TC034408; LOC663720"]
[1693,"NC_007424.3",12251879,"SNV","T","G","Heterozygous",13,26,50,1,11,8,0.42,37.92,19,34,4,7,2.49,0.68,1,"no","G/T","No",1,101.27,"XP_015839057.1:c.[644A>C]; XP_974847.2:c.[647A>C]","XP_015839057.1:p.[Asn215Thr]; XP_974847.2:p.[Asn216Thr]","LOC663720",663720,null,"663720 [Gene Symbol: LOC663720] [Locus Tag: TcasGA2_TC034408] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663720] [Gene Type: protein-coding]","TcasGA2_TC034408; LOC663720"]
[1694,"NC_007424.3",12348718,"SNV","T","A","Homozygous",20,20,100,1,9,14,0.39,37.95,23,23,11,11,null,1,1,"no","A/A","No",1,81.69,"XP_015839062.1:c.[144+17694T>A]; XP_008198168.2:c.[160A>T]; XP_015839061.1:c.[144+17694T>A]","XP_008198168.2:p.Thr54Ser","LOC655549, LOC654950","655549 , 654950",null,"655549 [Gene Symbol: LOC655549] [Locus Tag: TcasGA2_TC012639] [Chromosome: LG9] [Map Location: ] [Description: nitric oxide synthase, salivary gland] [Gene Type: protein-coding] || 654950 [Gene Symbol: LOC654950] [Locus Tag: TcasGA2_TC011873] [Chromosome: LG9] [Map Location: ] [Description: integrin alpha-PS3] [Gene Type: protein-coding]","LOC655549; TcasGA2_TC012639 || TcasGA2_TC011873; LOC654950"]
[1695,"NC_007424.3",12388903,"SNV","C","T","Homozygous",23,23,100,1,14,10,0.42,37.39,24,24,10,16,null,1,1,"no","T/T","No",1,90.72,"XP_015839062.1:c.[145-19363C>T]; XP_008198172.2:c.[190G>A]; XP_015839061.1:c.[145-19363C>T]","XP_008198172.2:p.Asp64Asn","LOC655549, LOC103314302","655549 , 103314302",null,"655549 [Gene Symbol: LOC655549] [Locus Tag: TcasGA2_TC012639] [Chromosome: LG9] [Map Location: ] [Description: nitric oxide synthase, salivary gland] [Gene Type: protein-coding] || 103314302 [Gene Symbol: LOC103314302] [Locus Tag: TcasGA2_TC011868] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314302] [Gene Type: protein-coding]","LOC655549; TcasGA2_TC012639 || LOC103314302; TcasGA2_TC011868"]
[1696,"NC_007424.3",12388905,"SNV","G","T","Homozygous",22,22,100,1,14,9,0.39,37.86,23,23,10,15,null,1,1,"no","T/T","No",1,87.71,"XP_015839062.1:c.[145-19361G>T]; XP_015839061.1:c.[145-19361G>T]; XP_008198172.2:c.[188C>A]","XP_008198172.2:p.Thr63Asn","LOC655549, LOC103314302","655549 , 103314302",null,"655549 [Gene Symbol: LOC655549] [Locus Tag: TcasGA2_TC012639] [Chromosome: LG9] [Map Location: ] [Description: nitric oxide synthase, salivary gland] [Gene Type: protein-coding] || 103314302 [Gene Symbol: LOC103314302] [Locus Tag: TcasGA2_TC011868] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314302] [Gene Type: protein-coding]","LOC655549; TcasGA2_TC012639 || LOC103314302; TcasGA2_TC011868"]
[1697,"NC_007424.3",12426520,"SNV","T","C","Heterozygous",9,21,42.86,1,2,7,0.22,37.44,9,22,5,7,-0.39,0.87,0.86,"no","C/T","No",1,70.16,"XP_015839064.1:c.[368A>G]; XP_015839063.1:c.[368A>G]","XP_015839064.1:p.[Lys123Arg]; XP_015839063.1:p.[Lys123Arg]","LOC655706",655706,null,"655706 [Gene Symbol: LOC655706] [Locus Tag: TcasGA2_TC011863] [Chromosome: LG9] [Map Location: LG9|LG9] [Description: 23 kDa integral membrane protein] [Gene Type: protein-coding]","TcasGA2_TC011863; LOC655706"]
[1698,"NC_007424.3",12449571,"SNV","G","C","Homozygous",22,22,100,1,13,9,0.41,37.82,22,22,13,11,null,1,1,"no","C/C","No",1,86.14,"XP_015838989.1:c.368G>C","XP_015838989.1:p.Gly123Ala","LOC103314289",103314289,null,"103314289 [Gene Symbol: LOC103314289] [Locus Tag: TcasGA2_TC012642] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314289] [Gene Type: protein-coding]","TcasGA2_TC012642; LOC103314289"]
[1699,"NC_007424.3",12455559,"SNV","A","C","Homozygous",23,23,100,1,18,5,0.22,37.78,23,23,15,15,null,1,1,"no","C/C","No",1,89.15,"XP_008198183.1:c.[333A>C]; XP_008198184.1:c.[333A>C]; XP_008198185.1:c.[333A>C]","XP_008198183.1:p.[Gln111His]; XP_008198184.1:p.[Gln111His]; XP_008198185.1:p.[Gln111His]","LOC656293",656293,null,"656293 [Gene Symbol: LOC656293] [Locus Tag: TcasGA2_TC012644] [Chromosome: LG9] [Map Location: ] [Description: tetraspanin-33] [Gene Type: protein-coding]","LOC656293; TcasGA2_TC012644"]
[1700,"NC_007424.3",12475066,"SNV","A","C","Heterozygous",11,28,39.29,1,5,8,0.38,38.73,13,30,6,8,1.43,0.45,0.83,"no","A/C","No",1,75.81,"XP_008198146.1:c.[2478A>C]; XP_015839202.1:c.[2478A>C]","XP_008198146.1:p.[Glu826Asp]; XP_015839202.1:p.[Glu826Asp]","LOC103314292",103314292,null,"103314292 [Gene Symbol: LOC103314292] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314292] [Gene Type: protein-coding]","LOC103314292"]
[1701,"NC_007424.3",12578983,"SNV","A","G","Homozygous",20,20,100,1,17,4,0.19,36.8,21,21,10,16,null,1,1,"no","G/G","No",1,80.09,"XP_001810857.1:c.2717A>G","XP_001810857.1:p.Glu906Gly","LOC100142123",100142123,null,"100142123 [Gene Symbol: LOC100142123] [Locus Tag: TcasGA2_TC012655] [Chromosome: LG9] [Map Location: ] [Description: zinc finger protein 271] [Gene Type: protein-coding]","TcasGA2_TC012655; LOC100142123"]
[1702,"NC_007424.3",12616836,"SNV","C","A","Heterozygous",16,27,59.26,1,8,8,0.5,39.56,16,27,9,8,2.37,0.29,0.58,"no","A/C","No",1,78.46,"XP_969864.1:c.351G>T","XP_969864.1:p.Gln117His","LOC658377",658377,null,"658377 [Gene Symbol: LOC658377] [Locus Tag: TcasGA2_TC011845] [Chromosome: LG9] [Map Location: ] [Description: peroxisomal targeting signal 2 receptor] [Gene Type: protein-coding]","LOC658377; TcasGA2_TC011845"]
[1703,"NC_007424.3",12620864,"SNV","A","G","Heterozygous",12,22,54.55,1,7,5,0.42,36.58,12,22,6,7,-0.4,0.89,0.78,"no","A/G","No",1,78.96,"XP_008198149.1:c.3094A>G","XP_008198149.1:p.Ser1032Gly","LOC100141983",100141983,null,"100141983 [Gene Symbol: LOC100141983] [Locus Tag: TcasGA2_TC012658] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141983] [Gene Type: protein-coding]","TcasGA2_TC012658; LOC100141983"]
[1704,"NC_007424.3",12684436,"SNV","G","A","Homozygous",20,20,100,1,11,9,0.45,38.85,20,20,12,14,null,1,1,"no","A/A","No",1,81.69,"XP_008198201.1:c.[328G>A]; XP_970620.1:c.[331G>A]","XP_008198201.1:p.[Gly110Ser]; XP_970620.1:p.[Gly111Ser]","LOC659200",659200,null,"659200 [Gene Symbol: LOC659200] [Locus Tag: TcasGA2_TC012664] [Chromosome: LG9] [Map Location: ] [Description: ran-binding protein 3] [Gene Type: protein-coding]","TcasGA2_TC012664; LOC659200"]
[1705,"NC_007424.3",12809065,"SNV","T","A","Heterozygous",8,22,36.36,1,4,4,0.5,40.5,8,22,3,5,2.15,0.54,0.64,"no","A/T","No",1,53.32,"XP_008198218.2:c.[1604+5627A>T]; XP_008198216.1:c.[2804T>A]; XP_971240.2:c.[2810T>A]; XP_015839087.1:c.[1505+5627A>T]; XP_015839078.1:c.[2810T>A]","XP_008198216.1:p.[Leu935Gln]; XP_971240.2:p.[Leu937Gln]; XP_015839078.1:p.[Leu937Gln]","LOC659943, LOC659880","659943 , 659880",null,"659943 [Gene Symbol: LOC659943] [Locus Tag: TcasGA2_TC011836] [Chromosome: LG9] [Map Location: ] [Description: poly(A)-specific ribonuclease PARN-like domain-containing protein 1] [Gene Type: protein-coding] || 659880 [Gene Symbol: LOC659880] [Locus Tag: TcasGA2_TC012669] [Chromosome: LG9] [Map Location: ] [Description: trafficking protein particle complex subunit 11] [Gene Type: protein-coding]","TcasGA2_TC011836; LOC659943 || LOC659880; TcasGA2_TC012669"]
[1706,"NC_007424.3",12919608,"SNV","C","A","Heterozygous",7,24,29.17,1,5,2,0.29,38.43,7,24,3,6,3.01,0.47,0.96,"no","A/C","No",1,32.92,"XP_015839265.1:c.[1640C>A]; XP_008198226.1:c.[1868C>A]; XP_015839264.1:c.[1868C>A]; XP_008198225.1:c.[1886C>A]","XP_015839265.1:p.[Pro547Gln]; XP_008198226.1:p.[Pro623Gln]; XP_015839264.1:p.[Pro623Gln]; XP_008198225.1:p.[Pro629Gln]","LOC660135",660135,null,"660135 [Gene Symbol: LOC660135] [Locus Tag: TcasGA2_TC012674] [Chromosome: LG9] [Map Location: ] [Description: crossveinless 2] [Gene Type: protein-coding]","LOC660135; cv-2; TcasGA2_TC012674"]
[1707,"NC_007424.3",13328149,"SNV","T","A","Homozygous",20,20,100,1,11,13,0.46,38.5,24,24,14,12,null,1,1,"no","A/A","No",1,81.69,"XP_008198257.1:c.694A>T","XP_008198257.1:p.Thr232Ser","LOC103314318",103314318,null,"103314318 [Gene Symbol: LOC103314318] [Locus Tag: TcasGA2_TC011807] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314318] [Gene Type: protein-coding]","LOC103314318; TcasGA2_TC011807"]
[1708,"NC_007424.3",13364323,"SNV","C","T","Homozygous",20,20,100,1,14,8,0.36,36.35,22,22,13,15,null,1,1,"no","T/T","No",1,81.7,"XP_008198265.1:c.[1180G>A]; XP_008198266.1:c.[1006G>A]; XP_008198267.1:c.[976G>A]","XP_008198265.1:p.[Val394Ile]; XP_008198266.1:p.[Val336Ile]; XP_008198267.1:p.[Val326Ile]","LOC662355",662355,null,"662355 [Gene Symbol: LOC662355] [Locus Tag: TcasGA2_TC011802] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC662355; TcasGA2_TC011802"]
[1709,"NC_007424.3",13398301,"SNV","T","C","Homozygous",29,29,100,1,11,21,0.34,36.69,32,32,18,18,null,1,1,"no","C/C","No",1,107.2,"XP_008198269.1:c.3038T>C","XP_008198269.1:p.Met1013Thr","LOC662527",662527,null,"662527 [Gene Symbol: LOC662527] [Locus Tag: TcasGA2_TC012700] [Chromosome: LG9] [Map Location: ] [Description: histone-lysine N-methyltransferase NSD2] [Gene Type: protein-coding]","LOC662527; TcasGA2_TC012700"]
[1710,"NC_007424.3",13405623,"SNV","C","G","Homozygous",20,20,100,1,10,13,0.43,35.9,23,23,11,13,null,1,1,"no","G/G","No",1,80.09,"XP_973747.1:c.380G>C","XP_973747.1:p.Gly127Ala","LOC662564",662564,null,"662564 [Gene Symbol: LOC662564] [Locus Tag: TcasGA2_TC011798] [Chromosome: LG9] [Map Location: ] [Description: altered disjunction] [Gene Type: protein-coding]","TcasGA2_TC011798; ald; LOC662564"]
[1711,"NC_007424.3",13405879,"SNV","A","T","Homozygous",34,34,100,1,23,21,0.48,38.03,44,44,17,18,null,1,1,"no","T/T","No",1,123.81,"XP_973747.1:c.124T>A","XP_973747.1:p.Ser42Thr","LOC662564",662564,null,"662564 [Gene Symbol: LOC662564] [Locus Tag: TcasGA2_TC011798] [Chromosome: LG9] [Map Location: ] [Description: altered disjunction] [Gene Type: protein-coding]","TcasGA2_TC011798; ald; LOC662564"]
[1712,"NC_007424.3",13464234,"SNV","T","C","Heterozygous",12,25,48,1,7,7,0.5,38.33,14,30,9,8,-0.9,0.61,0.94,"no","C/T","No",1,97.03,"XP_974030.1:c.712A>G","XP_974030.1:p.Lys238Glu","LOC663060, LOC662862","663060 , 662862",null,"663060 [Gene Symbol: LOC663060] [Locus Tag: TcasGA2_TC012706] [Chromosome: LG9] [Map Location: ] [Description: origin recognition complex subunit 5] [Gene Type: protein-coding] || 662862 [Gene Symbol: LOC662862] [Locus Tag: TcasGA2_TC011793] [Chromosome: LG9] [Map Location: ] [Description: annexin B9] [Gene Type: protein-coding]","TcasGA2_TC012706; LOC663060 || TcasGA2_TC011793; LOC662862"]
[1713,"NC_007424.3",13616155,"SNV","C","A","Heterozygous",17,22,77.27,0.97,16,1,0.06,38.12,17,22,8,15,0.51,0.45,0.32,"no","A/C","No",1,15.98,"XP_015839119.1:c.[1755C>A]; XP_008198294.1:c.[1608C>A]; XP_015839120.1:c.[1608C>A]; XP_974469.1:c.[1608C>A]","XP_015839119.1:p.[Asp585Glu]; XP_008198294.1:p.[Asp536Glu]; XP_015839120.1:p.[Asp536Glu]; XP_974469.1:p.[Asp536Glu]","LOC663321",663321,null,"663321 [Gene Symbol: LOC663321] [Locus Tag: TcasGA2_TC012717] [Chromosome: LG9] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC663321; TcasGA2_TC012717"]
[1714,"NC_007424.3",13616485,"SNV","T","G","Homozygous",19,20,95,1,6,16,0.27,38.21,22,24,7,11,null,0.97,1,"no","G/G","No",1,51.61,"XP_008198294.1:c.[1938T>G]; XP_015839119.1:c.[2085T>G]; XP_015839120.1:c.[1938T>G]; XP_974469.1:c.[1938T>G]","XP_008198294.1:p.[Asn646Lys]; XP_015839119.1:p.[Asn695Lys]; XP_015839120.1:p.[Asn646Lys]; XP_974469.1:p.[Asn646Lys]","LOC663321",663321,null,"663321 [Gene Symbol: LOC663321] [Locus Tag: TcasGA2_TC012717] [Chromosome: LG9] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC663321; TcasGA2_TC012717"]
[1715,"NC_007424.3",13619325,"SNV","T","C","Homozygous",20,20,100,1,6,15,0.29,38.6,21,21,14,12,null,1,1,"no","C/C","No",1,80.12,"XP_974469.1:c.[4724T>C]; XP_015839119.1:c.[4871T>C]; XP_008198294.1:c.[4724T>C]; XP_015839120.1:c.[4724T>C]","XP_974469.1:p.[Met1575Thr]; XP_015839119.1:p.[Met1624Thr]; XP_008198294.1:p.[Met1575Thr]; XP_015839120.1:p.[Met1575Thr]","LOC663321",663321,null,"663321 [Gene Symbol: LOC663321] [Locus Tag: TcasGA2_TC012717] [Chromosome: LG9] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC663321; TcasGA2_TC012717"]
[1716,"NC_007424.3",13710398,"SNV","A","T","Homozygous",30,30,100,1,6,26,0.19,36.8,32,32,14,15,null,1,1,"no","T/T","No",1,108.77,"XP_974567.2:c.1270A>T","XP_974567.2:p.Ile424Phe","LOC663428",663428,null,"663428 [Gene Symbol: LOC663428] [Locus Tag: TcasGA2_TC012725] [Chromosome: LG9] [Map Location: ] [Description: guanine nucleotide-binding protein-like 3 homolog] [Gene Type: protein-coding]","LOC663428; TcasGA2_TC012725"]
[1717,"NC_007424.3",13710441,"SNV","A","C","Homozygous",24,24,100,1,9,18,0.33,38.79,27,27,13,15,null,1,1,"no","C/C","No",1,92.15,"XP_974567.2:c.1313A>C","XP_974567.2:p.Glu438Ala","LOC663428",663428,null,"663428 [Gene Symbol: LOC663428] [Locus Tag: TcasGA2_TC012725] [Chromosome: LG9] [Map Location: ] [Description: guanine nucleotide-binding protein-like 3 homolog] [Gene Type: protein-coding]","LOC663428; TcasGA2_TC012725"]
[1718,"NC_007424.3",13713735,"SNV","A","T","Homozygous",26,26,100,1,11,21,0.34,35.38,32,32,11,13,null,1,1,"no","T/T","No",1,99.75,"XP_008198301.1:c.[682A>T]; XP_974584.2:c.[39-1062T>A]; XP_008198300.1:c.[682A>T]","XP_008198301.1:p.[Ser228Cys]; XP_008198300.1:p.[Ser228Cys]","LOC663446, LOC663462","663446 , 663462",null,"663446 [Gene Symbol: LOC663446] [Locus Tag: TcasGA2_TC011773] [Chromosome: LG9] [Map Location: ] [Description: calponin homology domain-containing protein DDB_G0272472] [Gene Type: protein-coding] || 663462 [Gene Symbol: LOC663462] [Locus Tag: TcasGA2_TC012726] [Chromosome: LG9] [Map Location: ] [Description: PR domain zinc finger protein 10] [Gene Type: protein-coding]","TcasGA2_TC011773; LOC663446 || TcasGA2_TC012726; LOC663462"]
[1719,"NC_007424.3",13713962,"SNV","C","G","Homozygous",29,30,96.67,1,12,19,0.39,37.93,31,32,17,18,null,1,1,"no","G/G","No",1,81.42,"XP_008198300.1:c.[848C>G]; XP_974584.2:c.[39-1289G>C]; XP_008198301.1:c.[848C>G]","XP_008198300.1:p.[Thr283Ser]; XP_008198301.1:p.[Thr283Ser]","LOC663446, LOC663462","663446 , 663462",null,"663446 [Gene Symbol: LOC663446] [Locus Tag: TcasGA2_TC011773] [Chromosome: LG9] [Map Location: ] [Description: calponin homology domain-containing protein DDB_G0272472] [Gene Type: protein-coding] || 663462 [Gene Symbol: LOC663462] [Locus Tag: TcasGA2_TC012726] [Chromosome: LG9] [Map Location: ] [Description: PR domain zinc finger protein 10] [Gene Type: protein-coding]","TcasGA2_TC011773; LOC663446 || TcasGA2_TC012726; LOC663462"]
[1720,"NC_007424.3",13716298,"SNV","G","C","Homozygous",25,25,100,1,20,7,0.26,37.52,27,27,12,14,null,1,1,"no","C/C","No",1,95.16,"XP_008198301.1:c.[1317G>C]; XP_008198300.1:c.[1317G>C]","XP_008198301.1:p.[Glu439Asp]; XP_008198300.1:p.[Glu439Asp]","LOC663462",663462,null,"663462 [Gene Symbol: LOC663462] [Locus Tag: TcasGA2_TC012726] [Chromosome: LG9] [Map Location: ] [Description: PR domain zinc finger protein 10] [Gene Type: protein-coding]","TcasGA2_TC012726; LOC663462"]
[1721,"NC_007424.3",13730253,"SNV","A","G","Homozygous",20,20,100,1,18,3,0.14,37.45,21,21,11,14,null,1,1,"no","G/G","No",1,80.09,"XP_008198302.1:c.1957T>C","XP_008198302.1:p.Cys653Arg","LOC663538",663538,null,"663538 [Gene Symbol: LOC663538] [Locus Tag: TcasGA2_TC011770] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663538] [Gene Type: protein-coding]","LOC663538; TcasGA2_TC011770"]
[1722,"NC_007424.3",13856356,"SNV","A","C","Homozygous",26,26,100,1,22,9,0.29,37.77,31,31,16,18,null,1,1,"no","C/C","No",1,98.17,"XP_015839253.1:c.468A>C","XP_015839253.1:p.Lys156Asn","LOC663626",663626,null,"663626 [Gene Symbol: LOC663626] [Locus Tag: TcasGA2_TC012729] [Chromosome: LG9] [Map Location: ] [Description: fumarylacetoacetate hydrolase domain-containing protein 2A] [Gene Type: protein-coding]","LOC663626; TcasGA2_TC012729"]
[1723,"NC_007424.3",13885841,"SNV","G","T","Homozygous",25,25,100,1,22,7,0.24,37.84,29,29,12,15,null,1,1,"no","T/T","No",1,96.73,"NP_001036067.1:c.[1875G>T]; XP_008198138.1:c.[1875G>T]","NP_001036067.1:p.[Glu625Asp]; XP_008198138.1:p.[Glu625Asp]","Cht10",652967,"chitinase 10","652967 [Gene Symbol: Cht10] [Locus Tag: TcasGA2_TC012734] [Chromosome: LG9] [Map Location: ] [Description: chitinase 10] [Gene Type: protein-coding]","Cht10; TcCht10; TcasGA2_TC012734"]
[1724,"NC_007424.3",13886561,"SNV","T","C","Homozygous",21,21,100,1,9,12,0.43,38.76,21,21,9,11,null,1,1,"no","C/C","No",1,83.12,"XP_008198138.1:c.[2459T>C]; NP_001036067.1:c.[2474T>C]","XP_008198138.1:p.[Val820Ala]; NP_001036067.1:p.[Val825Ala]","Cht10",652967,"chitinase 10","652967 [Gene Symbol: Cht10] [Locus Tag: TcasGA2_TC012734] [Chromosome: LG9] [Map Location: ] [Description: chitinase 10] [Gene Type: protein-coding]","Cht10; TcCht10; TcasGA2_TC012734"]
[1725,"NC_007424.3",13897579,"SNV","T","G","Homozygous",23,23,100,1,1,22,0.04,36.74,23,23,12,14,null,1,1,"no","G/G","No",1,89.12,"XP_974863.1:c.[464A>C]; XP_015839110.1:c.[464A>C]; XP_008198309.1:c.[464A>C]; XP_008198310.1:c.[464A>C]","XP_974863.1:p.[Asn155Thr]; XP_015839110.1:p.[Asn155Thr]; XP_008198309.1:p.[Asn155Thr]; XP_008198310.1:p.[Asn155Thr]","LOC663735",663735,null,"663735 [Gene Symbol: LOC663735] [Locus Tag: TcasGA2_TC011759] [Chromosome: LG9] [Map Location: ] [Description: ubiquitin thioesterase trabid] [Gene Type: protein-coding]","LOC663735; TcasGA2_TC011759"]
[1726,"NC_007424.3",13918814,"SNV","C","A","Homozygous",22,22,100,1,19,4,0.17,38.41,23,23,12,15,null,1,1,"no","A/A","No",1,87.71,"XP_008198313.1:c.[922G>T]; XP_015839275.1:c.[877G>T]; XP_008198312.1:c.[922G>T]","XP_008198313.1:p.[Ala308Ser]; XP_015839275.1:p.[Ala293Ser]; XP_008198312.1:p.[Ala308Ser]","LOC663804",663804,null,"663804 [Gene Symbol: LOC663804] [Locus Tag: TcasGA2_TC011754] [Chromosome: LG9] [Map Location: ] [Description: ABC transporter G family member 20] [Gene Type: protein-coding]","LOC663804; TcasGA2_TC011754"]
[1727,"NC_007424.3","14246932..14246933","MNV","GG","AA","Homozygous",17,20,85,1,6,14,0.3,38.56,20,23,13,12,null,0.99,0.95,"no","AA/AA","No",1,200,"XP_008198327.1:c.1902_1903delGGinsAA","XP_008198327.1:p.Val635Ile","LOC664089",664089,null,"664089 [Gene Symbol: LOC664089] [Locus Tag: TcasGA2_TC012753] [Chromosome: LG9] [Map Location: ] [Description: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2] [Gene Type: protein-coding]","LOC664089; TcasGA2_TC012753"]
[1728,"NC_007424.3",14296381,"SNV","A","G","Heterozygous",7,23,30.43,1,1,7,0.12,34.71,8,27,5,4,-1.37,0.16,0.64,"no","A/G","No",1,38.92,"XP_008198331.1:c.[365A>G]; XP_008198330.1:c.[410A>G]; XP_975231.1:c.[398A>G]; XP_008198332.1:c.[365A>G]","XP_008198331.1:p.[Asn122Ser]; XP_008198330.1:p.[Asn137Ser]; XP_975231.1:p.[Asn133Ser]; XP_008198332.1:p.[Asn122Ser]","LOC664123",664123,null,"664123 [Gene Symbol: LOC664123] [Locus Tag: TcasGA2_TC012756] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort] [Gene Type: protein-coding]","TcasGA2_TC012756; LOC664123"]
[1729,"NC_007424.3",14296387,"SNV","A","C","Heterozygous",15,23,65.22,1,6,10,0.38,37.67,16,26,8,12,0.87,0.75,0.98,"no","A/C","No",1,46.96,"XP_008198332.1:c.[371A>C]; XP_008198331.1:c.[371A>C]; XP_008198330.1:c.[416A>C]; XP_975231.1:c.[404A>C]","XP_008198332.1:p.[Glu124Ala]; XP_008198331.1:p.[Glu124Ala]; XP_008198330.1:p.[Glu139Ala]; XP_975231.1:p.[Glu135Ala]","LOC664123",664123,null,"664123 [Gene Symbol: LOC664123] [Locus Tag: TcasGA2_TC012756] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort] [Gene Type: protein-coding]","TcasGA2_TC012756; LOC664123"]
[1730,"NC_007424.3",14300645,"SNV","T","C","Homozygous",22,22,100,1,14,10,0.42,38.18,24,24,13,18,null,1,1,"no","C/C","No",1,86.14,"XP_008198166.1:c.296T>C","XP_008198166.1:p.Ile99Thr","LOC664131",664131,null,"664131 [Gene Symbol: LOC664131] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort-like] [Gene Type: protein-coding]","LOC664131"]
[1731,"NC_007424.3",14306640,"SNV","A","G","Heterozygous",10,22,45.45,1,1,9,0.1,37.6,10,28,4,6,null,0.68,0.62,"no","complex","No",1,200,"XP_015839207.1:c.[907A>G]; XP_975247.2:c.[793A>G]; XP_015839208.1:c.[907A>G]","XP_015839207.1:p.[Lys303Glu]; XP_975247.2:p.[Lys265Glu]; XP_015839208.1:p.[Lys303Glu]","LOC664140",664140,null,"664140 [Gene Symbol: LOC664140] [Locus Tag: TcasGA2_TC012758] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort] [Gene Type: protein-coding]","TcasGA2_TC012758; LOC664140"]
[1732,"NC_007424.3","14306640..14306641","MNV","AA","GC","Heterozygous",9,22,40.91,1,5,8,0.38,38.11,13,28,6,9,null,0.87,0.93,"no","complex","No",1,200,"XP_015839207.1:c.[907_908delAAinsGC]; XP_015839208.1:c.[907_908delAAinsGC]; XP_975247.2:c.[793_794delAAinsGC]","XP_015839207.1:p.[Lys303Ala]; XP_015839208.1:p.[Lys303Ala]; XP_975247.2:p.[Lys265Ala]","LOC664140",664140,null,"664140 [Gene Symbol: LOC664140] [Locus Tag: TcasGA2_TC012758] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort] [Gene Type: protein-coding]","TcasGA2_TC012758; LOC664140"]
[1733,"NC_007424.3",14320655,"SNV","T","G","Homozygous",25,25,100,1,12,17,0.41,38.48,29,29,17,16,null,1,1,"no","G/G","No",1,95.14,"XP_975266.1:c.304A>C","XP_975266.1:p.Ile102Leu","LOC664159",664159,null,"664159 [Gene Symbol: LOC664159] [Locus Tag: TcasGA2_TC011730] [Chromosome: LG9] [Map Location: ] [Description: enolase] [Gene Type: protein-coding]","LOC664159; TcasGA2_TC011730"]
[1734,"NC_007424.3",14497644,"SNV","T","G","Heterozygous",6,20,30,1,6,4,0.4,35.67,10,26,3,3,-1.77,0.31,1,"no","G/T","No",1,34.05,"XP_008198370.1:c.[1546A>C]; XP_008198368.1:c.[1552A>C]","XP_008198370.1:p.[Lys516Gln]; XP_008198368.1:p.[Lys518Gln]","LOC100142573",100142573,null,"100142573 [Gene Symbol: LOC100142573] [Locus Tag: TcasGA2_TC011724] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100142573] [Gene Type: protein-coding]","LOC100142573; TcasGA2_TC011724"]
[1735,"NC_007424.3",14497704,"SNV","T","A","Homozygous",20,20,100,1,9,15,0.38,38.75,24,24,9,12,null,1,1,"no","A/A","No",1,81.69,"XP_008198368.1:c.[1492A>T]; XP_008198370.1:c.[1486A>T]","XP_008198368.1:p.[Ile498Leu]; XP_008198370.1:p.[Ile496Leu]","LOC100142573",100142573,null,"100142573 [Gene Symbol: LOC100142573] [Locus Tag: TcasGA2_TC011724] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100142573] [Gene Type: protein-coding]","LOC100142573; TcasGA2_TC011724"]
[1736,"NC_007424.3",14519794,"SNV","A","T","Heterozygous",11,20,55,1,2,9,0.18,35.82,11,20,6,6,-0.84,0.56,0.75,"no","A/T","No",1,71.65,"XP_008198372.1:c.866T>A","XP_008198372.1:p.Phe289Tyr","LOC655387",655387,null,"655387 [Gene Symbol: LOC655387] [Locus Tag: TcasGA2_TC011723] [Chromosome: LG9] [Map Location: ] [Description: leucine-rich repeat-containing protein 27] [Gene Type: protein-coding]","TcasGA2_TC011723; LOC655387"]
[1737,"NC_007424.3",14556827,"SNV","C","G","Heterozygous",11,21,52.38,1,9,3,0.25,38.91,12,22,6,8,0.42,0.83,0.91,"no","C/G","No",1,81.44,"XP_967927.1:c.975C>G","XP_967927.1:p.Asp325Glu","LOC656294",656294,null,"656294 [Gene Symbol: LOC656294] [Locus Tag: TcasGA2_TC012775] [Chromosome: LG9] [Map Location: ] [Description: DC-STAMP domain-containing protein 1] [Gene Type: protein-coding]","LOC656294; TcasGA2_TC012775"]
[1738,"NC_007424.3",14559176,"SNV","G","T","Homozygous",28,28,100,1,21,11,0.34,37.43,32,32,15,17,null,1,1,"no","T/T","No",1,105.77,"XP_967927.1:c.1905G>T","XP_967927.1:p.Leu635Phe","LOC656294",656294,null,"656294 [Gene Symbol: LOC656294] [Locus Tag: TcasGA2_TC012775] [Chromosome: LG9] [Map Location: ] [Description: DC-STAMP domain-containing protein 1] [Gene Type: protein-coding]","LOC656294; TcasGA2_TC012775"]
[1739,"NC_007424.3",14579246,"SNV","C","T","Heterozygous",8,24,33.33,1,2,8,0.2,34.75,10,29,2,2,-2.27,0.05,0.42,"no","C/T","No",1,47.98,"XP_008198385.1:c.904G>A","XP_008198385.1:p.Ala302Thr","LOC656625",656625,null,"656625 [Gene Symbol: LOC656625] [Locus Tag: TcasGA2_TC011717] [Chromosome: LG9] [Map Location: ] [Description: nuclear pore complex protein Nup160 homolog] [Gene Type: protein-coding]","LOC656625; TcasGA2_TC011717"]
[1740,"NC_007424.3",14580934,"SNV","T","C","Homozygous",22,22,100,1,19,5,0.21,38.27,24,24,10,11,null,1,1,"no","C/C","No",1,86.14,"XP_975801.1:c.460A>G","XP_975801.1:p.Thr154Ala","LOC655733",655733,null,"655733 [Gene Symbol: LOC655733] [Locus Tag: TcasGA2_TC011716] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC655733] [Gene Type: protein-coding]","TcasGA2_TC011716; LOC655733"]
[1741,"NC_007424.3",14582627,"SNV","A","C","Heterozygous",15,21,71.43,1,9,6,0.4,38.53,15,21,9,9,1.09,0.71,0.99,"no","A/C","No",1,27.09,"XP_008198386.1:c.[211T>G]; XP_008198387.1:c.[205T>G]","XP_008198386.1:p.[Ser71Ala]; XP_008198387.1:p.[Ser69Ala]","LOC103314347",103314347,null,"103314347 [Gene Symbol: LOC103314347] [Locus Tag: TcasGA2_TC011715] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314347; TcasGA2_TC011715"]
[1742,"NC_007424.3",14583511,"SNV","A","C","Heterozygous",8,20,40,1,5,5,0.5,39,10,24,8,7,1.39,0.67,0.91,"no","A/C","No",1,59.77,"XP_008198354.1:c.1779T>G","XP_008198354.1:p.Phe593Leu","LOC103314340",103314340,null,"103314340 [Gene Symbol: LOC103314340] [Locus Tag: TcasGA2_TC011714] [Chromosome: LG9] [Map Location: ] [Description: glutamyl aminopeptidase] [Gene Type: protein-coding]","LOC103314340; TcasGA2_TC011714"]
[1743,"NC_007424.3",14584014,"SNV","C","T","Homozygous",23,23,100,1,16,11,0.41,37.91,27,27,14,17,null,1,1,"no","T/T","No",1,90.72,"XP_008198354.1:c.1364G>A","XP_008198354.1:p.Gly455Glu","LOC103314340",103314340,null,"103314340 [Gene Symbol: LOC103314340] [Locus Tag: TcasGA2_TC011714] [Chromosome: LG9] [Map Location: ] [Description: glutamyl aminopeptidase] [Gene Type: protein-coding]","LOC103314340; TcasGA2_TC011714"]
[1744,"NC_007424.3",14592775,"SNV","A","G","Homozygous",24,24,100,1,14,12,0.46,35.62,26,26,10,17,null,1,1,"no","G/G","No",1,92.12,"XP_968472.1:c.901T>C","XP_968472.1:p.Ser301Pro","LOC656879",656879,null,"656879 [Gene Symbol: LOC656879] [Locus Tag: TcasGA2_TC011713] [Chromosome: LG9] [Map Location: ] [Description: ATP-binding cassette sub-family G member 8] [Gene Type: protein-coding]","LOC656879; TcasGA2_TC011713"]
[1745,"NC_007424.3","14657199^14657200","Insertion","-","TCC","Heterozygous",5,20,25,1,3,3,0.5,35,6,22,4,5,-0.28,0.7,0.82,"no","complex","No",1,200,"XP_969067.1:c.569_570insGGA","XP_969067.1:p.Glu190_Gln191insGlu","LOC657518",657518,null,"657518 [Gene Symbol: LOC657518] [Locus Tag: TcasGA2_TC011708] [Chromosome: LG9] [Map Location: ] [Description: transcription initiation factor IIA subunit 1] [Gene Type: protein-coding]","LOC657518; TcasGA2_TC011708"]
[1746,"NC_007424.3",14859125,"SNV","G","A","Homozygous",26,27,96.3,1,25,1,0.04,38.5,26,27,11,15,null,0.88,1,"no","A/A","No",1,70.65,"XP_008198400.1:c.[2140C>T]; XP_008198401.1:c.[2137C>T]","XP_008198400.1:p.[Leu714Phe]; XP_008198401.1:p.[Leu713Phe]","LOC658153",658153,null,"658153 [Gene Symbol: LOC658153] [Locus Tag: TcasGA2_TC011701] [Chromosome: LG9] [Map Location: ] [Description: Werner syndrome ATP-dependent helicase] [Gene Type: protein-coding]","TcasGA2_TC011701; LOC658153"]
[1747,"NC_007424.3",14897996,"SNV","C","T","Heterozygous",6,20,30,1,3,6,0.33,36.83,9,23,3,3,-0.95,0.42,0.65,"no","C/T","No",1,33.56,"XP_969865.2:c.[182-3315G>A]; XP_008198402.2:c.[3109G>A]","XP_008198402.2:p.Gly1037Ser","LOC658378, LOC103314351","658378 , 103314351",null,"658378 [Gene Symbol: LOC658378] [Locus Tag: TcasGA2_TC011700] [Chromosome: LG9] [Map Location: ] [Description: obg-like ATPase 1] [Gene Type: protein-coding] || 103314351 [Gene Symbol: LOC103314351] [Locus Tag: TcasGA2_TC011699] [Chromosome: LG9] [Map Location: ] [Description: adenylate kinase 9] [Gene Type: protein-coding]","LOC658378; TcasGA2_TC011700 || LOC103314351; TcasGA2_TC011699"]
[1748,"NC_007424.3",15019326,"SNV","A","G","Heterozygous",11,21,52.38,1,4,8,0.33,37.09,12,24,7,6,-1.62,0.47,0.95,"no","A/G","No",1,81.61,"XP_970545.1:c.1516A>G","XP_970545.1:p.Ile506Val","LOC659120",659120,null,"659120 [Gene Symbol: LOC659120] [Locus Tag: TcasGA2_TC012795] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC659120] [Gene Type: protein-coding]","LOC659120; TcasGA2_TC012795"]
[1749,"NC_007424.3",15022357,"SNV","A","G","Heterozygous",15,26,57.69,1,10,5,0.33,38.93,15,26,8,6,1.14,0.43,1,"no","A/G","No",1,80.55,"XP_015839269.1:c.1745A>G","XP_015839269.1:p.Asn582Ser","LOC659544, LOC659269","659544 , 659269",null,"659544 [Gene Symbol: LOC659544] [Locus Tag: TcasGA2_TC012797] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC659544] [Gene Type: protein-coding] || 659269 [Gene Symbol: LOC659269] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC659269] [Gene Type: protein-coding]","LOC659544; TcasGA2_TC012797 || LOC659269"]
[1750,"NC_007424.3",15119704,"SNV","A","G","Homozygous",25,25,100,1,11,15,0.42,37.84,26,26,14,16,null,1,1,"no","G/G","No",1,95.14,"XP_008198416.2:c.871A>G","XP_008198416.2:p.Ile291Val","LOC660504",660504,null,"660504 [Gene Symbol: LOC660504] [Locus Tag: TcasGA2_TC012803] [Chromosome: LG9] [Map Location: ] [Description: protein CNPPD1] [Gene Type: protein-coding]","LOC660504; TcasGA2_TC012803"]
[1751,"NC_007424.3",15120286,"SNV","G","C","Heterozygous",11,20,55,1,11,7,0.39,36.55,18,30,9,7,-2.28,0.62,1,"no","C/G","No",1,71.7,"XP_015839116.1:c.[668C>G]; XP_971879.2:c.[674C>G]","XP_015839116.1:p.[Thr223Ser]; XP_971879.2:p.[Thr225Ser]","LOC660564",660564,null,"660564 [Gene Symbol: LOC660564] [Locus Tag: TcasGA2_TC011681] [Chromosome: LG9] [Map Location: ] [Description: probable cytosolic iron-sulfur protein assembly protein Ciao1] [Gene Type: protein-coding]","TcasGA2_TC011681; LOC660564"]
[1752,"NC_007424.3",15463995,"SNV","A","G","Heterozygous",9,20,45,1,7,5,0.42,35.11,12,23,4,5,-2.09,0.29,0.78,"no","A/G","No",1,72.78,"XP_972982.2:c.[2678A>G]; XP_008198510.1:c.[2678A>G]; XP_008198512.1:c.[2165A>G]; XP_008198511.1:c.[2678A>G]","XP_972982.2:p.[Asn893Ser]; XP_008198510.1:p.[Asn893Ser]; XP_008198512.1:p.[Asn722Ser]; XP_008198511.1:p.[Asn893Ser]","LOC661743",661743,null,"661743 [Gene Symbol: LOC661743] [Locus Tag: TcasGA2_TC011612] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC661743] [Gene Type: protein-coding]","TcasGA2_TC011612; LOC661743"]
[1753,"NC_007424.3",15474722,"SNV","C","T","Homozygous",25,25,100,1,11,18,0.38,37.84,29,29,13,16,null,1,1,"no","T/T","No",1,96.73,"XP_008198507.1:c.428C>T","XP_008198507.1:p.Ala143Val","LOC100142140",100142140,null,"100142140 [Gene Symbol: LOC100142140] [Locus Tag: TcasGA2_TC011616] [Chromosome: LG9] [Map Location: ] [Description: inward rectifier potassium channel 2] [Gene Type: protein-coding]","LOC100142140; TcasGA2_TC011616"]
[1754,"NC_007424.3",15491877,"SNV","T","A","Homozygous",21,21,100,1,12,12,0.5,38.52,24,24,13,12,null,1,1,"no","A/A","No",1,84.7,"XP_015839248.1:c.1240A>T","XP_015839248.1:p.Ile414Phe","LOC100142542",100142542,null,"100142542 [Gene Symbol: LOC100142542] [Locus Tag: TcasGA2_TC012862] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100142542] [Gene Type: protein-coding]","LOC100142542; TcasGA2_TC012862"]
[1755,"NC_007424.3",15608961,"SNV","T","C","Homozygous",20,20,100,1,12,15,0.44,37.6,27,27,11,13,null,1,1,"no","C/C","No",1,80.11,"XP_972146.1:c.1513A>G","XP_972146.1:p.Lys505Glu","LOC660850",660850,null,"660850 [Gene Symbol: LOC660850] [Locus Tag: TcasGA2_TC012853] [Chromosome: LG9] [Map Location: ] [Description: matrix metalloproteinase 3] [Gene Type: protein-coding]","TcasGA2_TC012853; LOC660850; Mmp-3"]
[1756,"NC_007424.3",15648388,"SNV","A","G","Homozygous",21,21,100,1,12,10,0.45,36.76,22,22,11,12,null,1,1,"no","G/G","No",1,83.09,"XP_015838961.1:c.3253T>C","XP_015838961.1:p.Cys1085Arg","LOC660320",660320,null,"660320 [Gene Symbol: LOC660320] [Locus Tag: TcasGA2_TC012846] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC660320] [Gene Type: protein-coding]","TcasGA2_TC012846; LOC660320"]
[1757,"NC_007424.3","15713022^15713023","Insertion","-","A","Heterozygous",7,24,29.17,1,7,4,0.36,38.43,11,32,5,4,1.24,0.72,1,"no","-/A","No",1,35.69,"XP_015839242.1:c.283_284insA","XP_015839242.1:p.Asp96fs","LOC660007, LOC107398687","660007 , 107398687",null,"660007 [Gene Symbol: LOC660007] [Locus Tag: TcasGA2_TC012843] [Chromosome: LG9] [Map Location: ] [Description: guanylate cyclase 32E] [Gene Type: protein-coding] || 107398687 [Gene Symbol: LOC107398687] [Locus Tag: TcasGA2_TC011627] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC107398687] [Gene Type: protein-coding]","LOC660007; TcasGA2_TC012843 || TcasGA2_TC011627; LOC107398687"]
[1758,"NC_007424.3",15713027,"Deletion","C","-","Heterozygous",7,23,30.43,1,7,4,0.36,38.71,11,31,5,4,0.94,0.64,1,"no","-/C","No",1,37.13,"XP_015839242.1:c.288delC","XP_015839242.1:p.Phe97fs","LOC660007, LOC107398687","660007 , 107398687",null,"660007 [Gene Symbol: LOC660007] [Locus Tag: TcasGA2_TC012843] [Chromosome: LG9] [Map Location: ] [Description: guanylate cyclase 32E] [Gene Type: protein-coding] || 107398687 [Gene Symbol: LOC107398687] [Locus Tag: TcasGA2_TC011627] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC107398687] [Gene Type: protein-coding]","LOC660007; TcasGA2_TC012843 || TcasGA2_TC011627; LOC107398687"]
[1759,"NC_007424.3",15713135,"SNV","A","T","Heterozygous",6,26,23.08,0.98,3,3,0.5,37.5,6,26,4,4,-1.7,0.31,1,"no","A/T","No",1,16.91,"XP_015839242.1:c.396A>T","XP_015839242.1:p.Lys132Asn","LOC660007, LOC107398687","660007 , 107398687",null,"660007 [Gene Symbol: LOC660007] [Locus Tag: TcasGA2_TC012843] [Chromosome: LG9] [Map Location: ] [Description: guanylate cyclase 32E] [Gene Type: protein-coding] || 107398687 [Gene Symbol: LOC107398687] [Locus Tag: TcasGA2_TC011627] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC107398687] [Gene Type: protein-coding]","LOC660007; TcasGA2_TC012843 || TcasGA2_TC011627; LOC107398687"]
[1760,"NC_007425.3",283047,"SNV","A","G","Homozygous",24,24,100,1,18,9,0.33,37.25,27,27,11,18,null,1,1,"no","G/G","No",1,92.13,"XP_008198554.1:c.[56T>C]; XP_008198553.1:c.[56T>C]","XP_008198554.1:p.[Val19Ala]; XP_008198553.1:p.[Val19Ala]","LOC660862",660862,null,"660862 [Gene Symbol: LOC660862] [Locus Tag: TcasGA2_TC011238] [Chromosome: LG10] [Map Location: ] [Description: ras-related and estrogen-regulated growth inhibitor] [Gene Type: protein-coding]","LOC660862; TcasGA2_TC011238"]
[1761,"NC_007425.3",712929,"SNV","C","T","Heterozygous",13,20,65,1,3,10,0.23,37.69,13,20,7,7,2.54,0.46,0.44,"no","C/T","No",1,47.44,"XP_972566.1:c.[170C>T]; XP_008198564.1:c.[384-4090C>T]","XP_972566.1:p.Ser57Phe","LOC661357, LOC661308","661357 , 661308",null,"661357 [Gene Symbol: LOC661357] [Locus Tag: TcasGA2_TC011253] [Chromosome: LG10] [Map Location: ] [Description: protein unc-13 homolog D] [Gene Type: protein-coding] || 661308 [Gene Symbol: LOC661308] [Locus Tag: TcasGA2_TC011254] [Chromosome: LG10] [Map Location: ] [Description: glutarate-semialdehyde dehydrogenase DavD] [Gene Type: protein-coding]","TcasGA2_TC011253; LOC661357 || TcasGA2_TC011254; LOC661308"]
[1762,"NC_007425.3",743135,"SNV","G","A","Heterozygous",6,20,30,1,2,4,0.33,37.33,6,22,5,6,-0.99,0.42,0.94,"no","A/G","No",1,33.71,"XP_972658.1:c.190G>A","XP_972658.1:p.Asp64Asn","LOC661407",661407,null,"661407 [Gene Symbol: LOC661407] [Locus Tag: TcasGA2_TC011256] [Chromosome: LG10] [Map Location: ] [Description: kanadaptin] [Gene Type: protein-coding]","TcasGA2_TC011256; LOC661407"]
[1763,"NC_007425.3",760248,"SNV","G","C","Homozygous",23,23,100,1,9,19,0.32,37.87,28,28,12,12,null,1,1,"no","C/C","No",1,89.14,"NP_001123894.1:c.782C>G","NP_001123894.1:p.Thr261Arg","Cyp314a1",661451,"cytochrome P450 CYP314A1","661451 [Gene Symbol: Cyp314a1] [Locus Tag: TcasGA2_TC011231] [Chromosome: LG10] [Map Location: ] [Description: cytochrome P450 CYP314A1] [Gene Type: protein-coding]","TcasGA2_TC011231; Cyp314a1"]
[1764,"NC_007425.3",1510252,"SNV","G","A","Heterozygous",7,21,33.33,1,3,5,0.38,38,8,22,5,6,-1.01,0.23,1,"no","A/G","No",1,43.58,"XP_015839392.1:c.[85-19319C>T]; XP_015839390.1:c.[697-19319C>T]; XP_015839391.1:c.[85-19319C>T]; XP_015839395.1:c.[463-19319C>T]; XP_015839389.1:c.[697-19319C>T]; XP_015839401.1:c.[883G>A]; XP_015839394.1:c.[46-19319C>T]; XP_015839393.1:c.[85-19319C>T]","XP_015839401.1:p.Val295Ile","LOC655559, LOC107398732","655559 , 107398732",null,"655559 [Gene Symbol: LOC655559] [Locus Tag: TcasGA2_TC016080] [Chromosome: LG10] [Map Location: ] [Description: protein sickie] [Gene Type: protein-coding] || 107398732 [Gene Symbol: LOC107398732] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: nose resistant to fluoxetine protein 6-like] [Gene Type: protein-coding]","LOC655559; TcasGA2_TC016080 || LOC107398732"]
[1765,"NC_007425.3",1679265,"SNV","G","C","Heterozygous",16,43,37.21,1,8,10,0.44,38.19,18,47,7,9,1.27,0.97,1,"no","C/G","No",1,101.55,"XP_015839388.1:c.585C>G","XP_015839388.1:p.Phe195Leu","LOC107398730",107398730,null,"107398730 [Gene Symbol: LOC107398730] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398730] [Gene Type: protein-coding]","LOC107398730"]
[1766,"NC_007425.3","1729441..1729442","MNV","TA","AT","Heterozygous",9,36,25,1,3,6,0.33,40.5,9,38,6,4,1.3,0.14,0.73,"no","complex","No",1,200,"XP_015839406.1:c.605_606delTAinsAT","XP_015839406.1:p.Ile202Asn","LOC103314713",103314713,null,"103314713 [Gene Symbol: LOC103314713] [Locus Tag: TcasGA2_TC016072] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314713] [Gene Type: protein-coding]","TcasGA2_TC016072; LOC103314713"]
[1767,"NC_007425.3",2103948,"SNV","T","A","Heterozygous",7,20,35,1,7,1,0.12,39.86,8,21,4,6,0.59,0.93,0.99,"no","A/T","No",1,46.14,"XP_015839427.1:c.[928T>A]; XP_008197931.1:c.[925T>A]","XP_015839427.1:p.[Phe310Ile]; XP_008197931.1:p.[Phe309Ile]","LOC656573",656573,null,"656573 [Gene Symbol: LOC656573] [Locus Tag: TcasGA2_TC011284] [Chromosome: LG10] [Map Location: ] [Description: sodium- and chloride-dependent glycine transporter 1] [Gene Type: protein-coding]","TcasGA2_TC011284; LOC656573"]
[1768,"NC_007425.3",2104020,"SNV","A","G","Homozygous",25,25,100,1,18,9,0.33,37.52,27,27,14,18,null,1,1,"no","G/G","No",1,95.13,"XP_008197931.1:c.[997A>G]; XP_015839427.1:c.[1000A>G]","XP_008197931.1:p.[Thr333Ala]; XP_015839427.1:p.[Thr334Ala]","LOC656573",656573,null,"656573 [Gene Symbol: LOC656573] [Locus Tag: TcasGA2_TC011284] [Chromosome: LG10] [Map Location: ] [Description: sodium- and chloride-dependent glycine transporter 1] [Gene Type: protein-coding]","TcasGA2_TC011284; LOC656573"]
[1769,"NC_007425.3",2104119,"SNV","G","A","Heterozygous",7,24,29.17,1,1,7,0.12,36.71,8,26,4,4,-1.17,0.65,0.42,"no","A/G","No",1,35.25,"XP_015839427.1:c.[1099G>A]; XP_008197931.1:c.[1096G>A]","XP_015839427.1:p.[Val367Ile]; XP_008197931.1:p.[Val366Ile]","LOC656573",656573,null,"656573 [Gene Symbol: LOC656573] [Locus Tag: TcasGA2_TC011284] [Chromosome: LG10] [Map Location: ] [Description: sodium- and chloride-dependent glycine transporter 1] [Gene Type: protein-coding]","TcasGA2_TC011284; LOC656573"]
[1770,"NC_007425.3",2104213,"SNV","C","T","Heterozygous",6,28,21.43,0.93,3,3,0.5,37.17,6,28,4,4,-1.43,0.32,1,"no","C/T","No",1,11.54,"XP_015839427.1:c.[1193C>T]; XP_008197931.1:c.[1190C>T]","XP_015839427.1:p.[Ala398Val]; XP_008197931.1:p.[Ala397Val]","LOC656573",656573,null,"656573 [Gene Symbol: LOC656573] [Locus Tag: TcasGA2_TC011284] [Chromosome: LG10] [Map Location: ] [Description: sodium- and chloride-dependent glycine transporter 1] [Gene Type: protein-coding]","TcasGA2_TC011284; LOC656573"]
[1771,"NC_007425.3",2145557,"SNV","C","T","Homozygous",23,23,100,1,19,8,0.3,37.78,27,27,15,18,null,1,1,"no","T/T","No",1,90.72,"XP_015839419.1:c.[602G>A]; XP_015839418.1:c.[602G>A]","XP_015839419.1:p.[Arg201Lys]; XP_015839418.1:p.[Arg201Lys]","LOC656998",656998,null,"656998 [Gene Symbol: LOC656998] [Locus Tag: TcasGA2_TC030230] [Chromosome: LG10] [Map Location: ] [Description: gustatory receptor candidate 16] [Gene Type: protein-coding]","gr16; TcasGA2_TC030230; LOC656998; TcGr141"]
[1772,"NC_007425.3",2145585,"SNV","G","A","Homozygous",23,23,100,1,13,14,0.48,37.43,27,27,14,17,null,1,1,"no","A/A","No",1,90.72,"XP_015839419.1:c.[574C>T]; XP_015839418.1:c.[574C>T]","XP_015839419.1:p.[Leu192Phe]; XP_015839418.1:p.[Leu192Phe]","LOC656998",656998,null,"656998 [Gene Symbol: LOC656998] [Locus Tag: TcasGA2_TC030230] [Chromosome: LG10] [Map Location: ] [Description: gustatory receptor candidate 16] [Gene Type: protein-coding]","gr16; TcasGA2_TC030230; LOC656998; TcGr141"]
[1773,"NC_007425.3",2279706,"SNV","G","A","Heterozygous",11,20,55,1,8,3,0.27,38.27,11,20,6,8,0.84,0.3,1,"no","A/G","No",1,72.72,"XP_015839415.1:c.86C>T","XP_015839415.1:p.Ala29Val","LOC107398746",107398746,null,"107398746 [Gene Symbol: LOC107398746] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: shematrin-like protein 3] [Gene Type: protein-coding]","LOC107398746"]
[1774,"NC_007425.3",2292990,"SNV","C","T","Heterozygous",14,21,66.67,1,3,12,0.2,37.21,15,22,9,10,0.3,0.67,1,"no","C/T","No",1,44.67,"XP_008197901.1:c.[617G>A]; XP_969096.1:c.[617G>A]","XP_008197901.1:p.[Ser206Asn]; XP_969096.1:p.[Ser206Asn]","LOC657548",657548,null,"657548 [Gene Symbol: LOC657548] [Locus Tag: TcasGA2_TC011206] [Chromosome: LG10] [Map Location: ] [Description: ubiquitin-protein ligase E3A] [Gene Type: protein-coding]","TcasGA2_TC011206; LOC657548"]
[1775,"NC_007425.3",2446841,"SNV","G","C","Homozygous",21,21,100,1,8,17,0.32,36.9,25,25,13,14,null,1,1,"no","C/C","No",1,83.13,"XP_015839447.1:c.944G>C","XP_015839447.1:p.Cys315Ser","LOC659888",659888,null,"659888 [Gene Symbol: LOC659888] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: rab-like protein 6] [Gene Type: protein-coding]","LOC659888"]
[1776,"NC_007425.3",2652274,"SNV","G","A","Homozygous",21,21,100,1,12,13,0.48,36.29,25,25,8,11,null,1,1,"no","A/A","No",1,84.7,"XP_015839518.1:c.[270+6464G>A]; XP_015839520.1:c.[270+6464G>A]; XP_015839522.1:c.[52G>A]; XP_015839517.1:c.[270+6464G>A]; XP_015839515.1:c.[270+6464G>A]; XP_015839516.1:c.[270+6464G>A]; XP_015839514.1:c.[270+6464G>A]; XP_015839521.1:c.[270+6464G>A]","XP_015839522.1:p.Gly18Ser","LOC659679",659679,null,"659679 [Gene Symbol: LOC659679] [Locus Tag: TcasGA2_TC031941] [Chromosome: LG10] [Map Location: ] [Description: CUGBP Elav-like family member 4] [Gene Type: protein-coding]","LOC659679; TcasGA2_TC031941"]
[1777,"NC_007425.3",2846502,"SNV","C","T","Heterozygous",7,27,25.93,1,3,4,0.43,39.14,7,32,2,4,0.58,0.23,0.95,"no","C/T","No",1,26.66,"XP_015839522.1:c.[58-115823C>T]; XP_015839514.1:c.[271-115823C>T]; XP_015839515.1:c.[271-115823C>T]; XP_015839521.1:c.[271-115823C>T]; XP_015839528.1:c.[91G>A]; XP_015839517.1:c.[271-115823C>T]; XP_015839516.1:c.[271-115823C>T]; XP_015839518.1:c.[271-115823C>T]; XP_015839520.1:c.[271-115823C>T]","XP_015839528.1:p.Val31Ile","LOC659679, LOC107398761","659679 , 107398761",null,"659679 [Gene Symbol: LOC659679] [Locus Tag: TcasGA2_TC031941] [Chromosome: LG10] [Map Location: ] [Description: CUGBP Elav-like family member 4] [Gene Type: protein-coding] || 107398761 [Gene Symbol: LOC107398761] [Locus Tag: TcasGA2_TC001533] [Chromosome: LG10] [Map Location: ] [Description: 23 kDa integral membrane protein-like] [Gene Type: protein-coding]","LOC659679; TcasGA2_TC031941 || TcasGA2_TC001533; LOC107398761"]
[1778,"NC_007425.3","3058437^3058438","Insertion","-","TCC","Heterozygous",15,25,60,1,14,1,0.07,38.53,15,25,8,10,0.29,0.13,0.37,"no","complex","No",1,200,"XP_008198124.1:c.368_369insGGA","XP_008198124.1:p.Glu123_Asp124insGlu","LOC659127",659127,null,"659127 [Gene Symbol: LOC659127] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: coiled-coil domain-containing protein 174] [Gene Type: protein-coding]","LOC659127"]
[1779,"NC_007425.3",3058463,"SNV","G","C","Homozygous",22,22,100,1,20,6,0.23,37.23,26,26,13,15,null,1,1,"no","C/C","No",1,86.13,"XP_008198124.1:c.343C>G","XP_008198124.1:p.Gln115Glu","LOC659127",659127,null,"659127 [Gene Symbol: LOC659127] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: coiled-coil domain-containing protein 174] [Gene Type: protein-coding]","LOC659127"]
[1780,"NC_007425.3",3172326,"SNV","A","C","Heterozygous",6,20,30,1,5,2,0.29,40.33,7,21,3,5,-0.49,0.82,0.9,"no","A/C","No",1,34.22,"XP_967642.2:c.145T>G","XP_967642.2:p.Leu49Val","LOC655992",655992,null,"655992 [Gene Symbol: LOC655992] [Locus Tag: TcasGA2_TC011180] [Chromosome: LG10] [Map Location: ] [Description: cytochrome P450-like protein] [Gene Type: protein-coding]","LOC655992; TcasGA2_TC011180"]
[1781,"NC_007425.3",3404480,"SNV","G","A","Homozygous",20,20,100,1,9,16,0.36,37.2,25,25,11,14,null,1,1,"no","A/A","No",1,81.7,"XP_015839512.1:c.473G>A","XP_015839512.1:p.Ser158Asn","LOC107398760",107398760,null,"107398760 [Gene Symbol: LOC107398760] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: prolyl 4-hydroxylase subunit alpha-1-like] [Gene Type: protein-coding]","LOC107398760"]
[1782,"NC_007425.3",3876360,"SNV","C","G","Heterozygous",5,23,21.74,0.94,0,5,0,35.6,5,26,3,3,-2.65,0.28,0.22,"no","C/G","No",1,12.51,"XP_015839442.1:c.289C>G","XP_015839442.1:p.Leu97Val","LOC103314415",103314415,null,"103314415 [Gene Symbol: LOC103314415] [Locus Tag: TcasGA2_TC011337] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314415] [Gene Type: protein-coding]","LOC103314415; TcasGA2_TC011337"]
[1783,"NC_007425.3",4273590,"SNV","A","G","Heterozygous",11,20,55,1,4,7,0.36,35.91,11,26,6,9,0.34,0.99,0.96,"no","A/G","No",1,71.91,"XP_972567.2:c.1682T>C","XP_972567.2:p.Ile561Thr","LOC661309",661309,null,"661309 [Gene Symbol: LOC661309] [Locus Tag: TcasGA2_TC011126] [Chromosome: LG10] [Map Location: ] [Description: double-stranded RNA-specific editase Adar] [Gene Type: protein-coding]","TcasGA2_TC011126; LOC661309"]
[1784,"NC_007425.3",4552085,"SNV","C","T","Homozygous",20,22,90.91,1,7,17,0.29,37.65,24,28,10,13,null,1,1,"no","T/T","No",1,26.43,"XP_015839555.1:c.8587C>T","XP_015839555.1:p.Arg2863Cys","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1785,"NC_007425.3",4555441,"SNV","T","C","Heterozygous",18,23,78.26,0.97,12,9,0.43,37.89,21,27,10,12,2.01,0.91,0.99,"no","C/T","No",1,15.24,"XP_015839555.1:c.9550T>C","XP_015839555.1:p.Tyr3184His","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1786,"NC_007425.3",4555721,"SNV","C","T","Heterozygous",15,20,75,0.99,9,12,0.43,35.87,21,26,10,9,0.17,0.77,1,"no","C/T","No",1,21.86,"XP_015839555.1:c.9784C>T","XP_015839555.1:p.His3262Tyr","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1787,"NC_007425.3",4555739,"SNV","C","G","Heterozygous",17,26,65.38,1,8,14,0.36,38.41,22,31,10,10,1.91,0.65,1,"no","C/G","No",1,54.94,"XP_015839555.1:c.9802C>G","XP_015839555.1:p.Pro3268Ala","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1788,"NC_007425.3",4556121,"SNV","C","T","Heterozygous",16,25,64,1,8,8,0.5,37.25,16,28,9,10,1.96,0.65,0.93,"no","C/T","No",1,50.01,"XP_015839555.1:c.10184C>T","XP_015839555.1:p.Thr3395Ile","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1789,"NC_007425.3",4559892,"SNV","A","G","Heterozygous",16,21,76.19,0.99,1,16,0.06,39.31,17,23,8,10,2.35,0.54,0.83,"no","A/G","No",1,18.26,"XP_015839555.1:c.11920A>G","XP_015839555.1:p.Ser3974Gly","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1790,"NC_007425.3","4560135..4560136","MNV","GT","AC","Homozygous",17,20,85,1,8,12,0.4,38.79,20,23,15,15,null,0.89,1,"no","AC/AC","No",1,200,"XP_015839555.1:c.12163_12164delGTinsAC","XP_015839555.1:p.Val4055Thr","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1791,"NC_007425.3",4813916,"SNV","G","A","Heterozygous",15,20,75,0.99,8,10,0.44,37.47,18,23,10,8,-0.7,0.94,1,"no","A/G","No",1,21.81,"XP_008199126.1:c.[253G>A]; XP_015839581.1:c.[767-7741C>T]; XP_015839582.1:c.[253G>A]; XP_015839583.1:c.[253G>A]","XP_008199126.1:p.[Glu85Lys]; XP_015839582.1:p.[Glu85Lys]; XP_015839583.1:p.[Glu85Lys]","LOC657833, LOC103314542","657833 , 103314542",null,"657833 [Gene Symbol: LOC657833] [Locus Tag: TcasGA2_TC016192] [Chromosome: LG10] [Map Location: ] [Description: gamma-aminobutyric acid type B receptor subunit 1] [Gene Type: protein-coding] || 103314542 [Gene Symbol: LOC103314542] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: probable cytochrome P450 6a13] [Gene Type: protein-coding]","TcasGA2_TC016192; LOC657833 || LOC103314542"]
[1792,"NC_007425.3",4815732,"SNV","G","A","Heterozygous",14,20,70,1,12,5,0.29,36.5,17,25,7,10,-1.03,0.36,0.81,"no","A/G","No",1,34.55,"XP_008199126.1:c.[1061G>A]; XP_015839582.1:c.[1061G>A]; XP_015839583.1:c.[914G>A]; XP_015839581.1:c.[767-9557C>T]","XP_008199126.1:p.[Arg354His]; XP_015839582.1:p.[Arg354His]; XP_015839583.1:p.[Arg305His]","LOC657833, LOC103314542","657833 , 103314542",null,"657833 [Gene Symbol: LOC657833] [Locus Tag: TcasGA2_TC016192] [Chromosome: LG10] [Map Location: ] [Description: gamma-aminobutyric acid type B receptor subunit 1] [Gene Type: protein-coding] || 103314542 [Gene Symbol: LOC103314542] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: probable cytochrome P450 6a13] [Gene Type: protein-coding]","TcasGA2_TC016192; LOC657833 || LOC103314542"]
[1793,"NC_007425.3",4815762,"SNV","A","G","Homozygous",24,24,100,1,14,13,0.48,38.75,27,27,10,16,null,1,1,"no","G/G","No",1,92.13,"XP_015839583.1:c.[944A>G]; XP_015839582.1:c.[1091A>G]; XP_015839581.1:c.[767-9587T>C]; XP_008199126.1:c.[1091A>G]","XP_015839583.1:p.[Lys315Arg]; XP_015839582.1:p.[Lys364Arg]; XP_008199126.1:p.[Lys364Arg]","LOC657833, LOC103314542","657833 , 103314542",null,"657833 [Gene Symbol: LOC657833] [Locus Tag: TcasGA2_TC016192] [Chromosome: LG10] [Map Location: ] [Description: gamma-aminobutyric acid type B receptor subunit 1] [Gene Type: protein-coding] || 103314542 [Gene Symbol: LOC103314542] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: probable cytochrome P450 6a13] [Gene Type: protein-coding]","TcasGA2_TC016192; LOC657833 || LOC103314542"]
[1794,"NC_007425.3","4815799..4815800","MNV","TG","AT","Homozygous",18,22,81.82,1,10,9,0.47,37.11,19,23,9,10,-2.43,0.91,0.94,"no","AT/AT","No",1,200,"XP_008199126.1:c.[1128_1129delTGinsAT]; XP_015839582.1:c.[1128_1129delTGinsAT]; XP_015839581.1:c.[767-9625_767-9624delCAinsAT]; XP_015839583.1:c.[981_982delTGinsAT]","XP_008199126.1:p.[Asn376_Ala377delinsLysSer]; XP_015839582.1:p.[Asn376_Ala377delinsLysSer]; XP_015839583.1:p.[Asn327_Ala328delinsLysSer]","LOC657833, LOC103314542","657833 , 103314542",null,"657833 [Gene Symbol: LOC657833] [Locus Tag: TcasGA2_TC016192] [Chromosome: LG10] [Map Location: ] [Description: gamma-aminobutyric acid type B receptor subunit 1] [Gene Type: protein-coding] || 103314542 [Gene Symbol: LOC103314542] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: probable cytochrome P450 6a13] [Gene Type: protein-coding]","TcasGA2_TC016192; LOC657833 || LOC103314542"]
[1795,"NC_007425.3",5771726,"SNV","C","T","Homozygous",20,20,100,1,5,18,0.22,39.5,23,23,12,8,null,1,1,"no","T/T","No",1,81.69,"XP_008198790.1:c.[1057G>A]; XP_015839620.1:c.[1057G>A]","XP_008198790.1:p.[Val353Met]; XP_015839620.1:p.[Val353Met]","LOC655253",655253,null,"655253 [Gene Symbol: LOC655253] [Locus Tag: TcasGA2_TC011402] [Chromosome: LG10] [Map Location: ] [Description: cilia- and flagella-associated protein 43] [Gene Type: protein-coding]","LOC655253; TcasGA2_TC011402"]
[1796,"NC_007425.3",5786581,"SNV","C","T","Homozygous",20,20,100,1,9,12,0.43,37.85,21,21,13,14,null,1,1,"no","T/T","No",1,81.7,"XP_966528.2:c.2722G>A","XP_966528.2:p.Asp908Asn","LOC654966",654966,null,"654966 [Gene Symbol: LOC654966] [Locus Tag: TcasGA2_TC011400] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC654966] [Gene Type: protein-coding]","TcasGA2_TC011400; LOC654966"]
[1797,"NC_007425.3",5886779,"SNV","G","A","Heterozygous",8,21,38.1,1,6,5,0.45,39.38,11,26,5,7,0.07,0.65,0.91,"no","A/G","No",1,56.25,"NP_001164243.1:c.[1667+339C>T]; XP_966784.2:c.[875G>A]","XP_966784.2:p.Arg292Lys","Ance-3, LOC657620","658170 , 657620","angiotensin-converting enzyme 3","658170 [Gene Symbol: Ance-3] [Locus Tag: TcasGA2_TC031642] [Chromosome: LG10] [Map Location: ] [Description: angiotensin-converting enzyme 3] [Gene Type: protein-coding] || 657620 [Gene Symbol: LOC657620] [Locus Tag: TcasGA2_TC031643] [Chromosome: LG10] [Map Location: ] [Description: pollen-specific leucine-rich repeat extensin-like protein 4] [Gene Type: protein-coding]","TcasGA2_TC031642; Ance-3; GLEAN_02092 || LOC657620; TcasGA2_TC031643"]
[1798,"NC_007425.3",5886784,"SNV","G","A","Heterozygous",8,26,30.77,1,6,5,0.45,37.12,11,31,5,7,-1.25,0.4,1,"no","A/G","No",1,42.37,"XP_966784.2:c.[880G>A]; NP_001164243.1:c.[1667+334C>T]","XP_966784.2:p.Val294Ile","Ance-3, LOC657620","658170 , 657620","angiotensin-converting enzyme 3","658170 [Gene Symbol: Ance-3] [Locus Tag: TcasGA2_TC031642] [Chromosome: LG10] [Map Location: ] [Description: angiotensin-converting enzyme 3] [Gene Type: protein-coding] || 657620 [Gene Symbol: LOC657620] [Locus Tag: TcasGA2_TC031643] [Chromosome: LG10] [Map Location: ] [Description: pollen-specific leucine-rich repeat extensin-like protein 4] [Gene Type: protein-coding]","TcasGA2_TC031642; Ance-3; GLEAN_02092 || LOC657620; TcasGA2_TC031643"]
[1799,"NC_007425.3",5920115,"SNV","T","A","Heterozygous",9,22,40.91,1,7,6,0.46,36.44,13,26,4,4,-1.8,0.86,0.98,"no","A/T","No",1,66.11,"XP_008199894.2:c.974T>A","XP_008199894.2:p.Phe325Tyr","LOC657844",657844,null,"657844 [Gene Symbol: LOC657844] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: tenascin] [Gene Type: protein-coding]","LOC657844; NimCl1"]
[1800,"NC_007425.3",6017399,"SNV","A","C","Heterozygous",21,29,72.41,1,11,12,0.48,36.43,23,32,9,15,-0.49,0.37,0.97,"no","A/C","No",1,33.12,"XP_008199891.1:c.2215A>C","XP_008199891.1:p.Ile739Leu","LOC656558",656558,null,"656558 [Gene Symbol: LOC656558] [Locus Tag: TcasGA2_TC031632] [Chromosome: LG10] [Map Location: ] [Description: collagen alpha-1(V) chain] [Gene Type: protein-coding]","LOC656558; TcasGA2_TC031632"]
[1801,"NC_007425.3",6017453,"SNV","A","G","Homozygous",29,29,100,1,16,15,0.48,37.31,31,31,13,20,null,1,1,"no","G/G","No",1,107.18,"XP_008199891.1:c.2269A>G","XP_008199891.1:p.Ile757Val","LOC656558",656558,null,"656558 [Gene Symbol: LOC656558] [Locus Tag: TcasGA2_TC031632] [Chromosome: LG10] [Map Location: ] [Description: collagen alpha-1(V) chain] [Gene Type: protein-coding]","LOC656558; TcasGA2_TC031632"]
[1802,"NC_007425.3",6017847,"SNV","A","G","Heterozygous",12,24,50,1,0,12,0,37.42,12,27,5,7,-0.23,0.34,0.17,"no","A/G","No",1,96.33,"XP_008199891.1:c.2623A>G","XP_008199891.1:p.Thr875Ala","LOC656558",656558,null,"656558 [Gene Symbol: LOC656558] [Locus Tag: TcasGA2_TC031632] [Chromosome: LG10] [Map Location: ] [Description: collagen alpha-1(V) chain] [Gene Type: protein-coding]","LOC656558; TcasGA2_TC031632"]
[1803,"NC_007425.3","6021470..6021472","Deletion","CAA","-","Homozygous",20,23,86.96,1,9,11,0.45,36.7,20,23,10,16,null,0.96,0.99,"no","-/-","No",1,200,"XP_015839573.1:c.[127_129delCAA]; XP_015839571.1:c.[127_129delCAA]; XP_015839572.1:c.[127_129delCAA]; XP_008199877.1:c.[127_129delCAA]; XP_015839570.1:c.[127_129delCAA]; XP_015839568.1:c.[127_129delCAA]; XP_015839569.1:c.[127_129delCAA]","XP_015839573.1:p.[Gln47del]; XP_015839571.1:p.[Gln47del]; XP_015839572.1:p.[Gln47del]; XP_008199877.1:p.[Gln47del]; XP_015839570.1:p.[Gln47del]; XP_015839568.1:p.[Gln47del]; XP_015839569.1:p.[Gln47del]","LOC656472",656472,null,"656472 [Gene Symbol: LOC656472] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: protein transport protein Sec16A] [Gene Type: protein-coding]","LOC656472"]
[1804,"NC_007425.3",6092999,"SNV","T","G","Homozygous",19,20,95,1,9,10,0.47,38.32,19,20,10,12,null,0.99,1,"no","G/G","No",1,52.39,"XP_967374.1:c.[87+356T>G]; XP_015839553.1:c.[1546A>C]","XP_015839553.1:p.Met516Leu","LOC655722, LOC103314776","655722 , 103314776",null,"655722 [Gene Symbol: LOC655722] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: DNA mismatch repair protein Msh2] [Gene Type: protein-coding] || 103314776 [Gene Symbol: LOC103314776] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314776] [Gene Type: protein-coding]","LOC655722 || LOC103314776"]
[1805,"NC_007425.3",6146925,"SNV","T","A","Homozygous",18,21,85.71,0.85,11,8,0.42,38.44,19,22,9,13,null,0.98,1,"no","A/A","No",1,8.28,"XP_966846.2:c.1170A>T","XP_966846.2:p.Lys390Asn","LOC655238",655238,null,"655238 [Gene Symbol: LOC655238] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: methionine synthase reductase] [Gene Type: protein-coding]","LOC655238"]
[1806,"NC_007425.3",6146929,"SNV","G","A","Homozygous",17,20,85,0.71,10,8,0.44,37.53,18,21,8,12,null,0.99,1,"no","A/A","No",1,5.32,"XP_966846.2:c.1166C>T","XP_966846.2:p.Ala389Val","LOC655238",655238,null,"655238 [Gene Symbol: LOC655238] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: methionine synthase reductase] [Gene Type: protein-coding]","LOC655238"]
[1807,"NC_007425.3",6234740,"SNV","T","C","Heterozygous",6,26,23.08,0.99,4,2,0.33,39.83,6,26,5,5,0.95,0.41,1,"no","C/T","No",1,21.35,"XP_008198892.1:c.[1873A>G]; XP_008198893.1:c.[1867A>G]","XP_008198892.1:p.[Lys625Glu]; XP_008198893.1:p.[Lys623Glu]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1808,"NC_007425.3",6234743,"SNV","A","G","Heterozygous",6,26,23.08,0.98,4,2,0.33,40.17,6,26,5,5,2.16,0.4,1,"no","A/G","No",1,17.9,"XP_008198893.1:c.[1864T>C]; XP_008198892.1:c.[1870T>C]","XP_008198893.1:p.[Ser622Pro]; XP_008198892.1:p.[Ser624Pro]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1809,"NC_007425.3",6234830,"SNV","T","A","Heterozygous",7,33,21.21,0.91,7,0,0,38.71,7,41,5,5,-1.56,0.08,0.26,"no","A/T","No",1,10.34,"XP_008198892.1:c.[1783A>T]; XP_008198893.1:c.[1777A>T]","XP_008198892.1:p.[Asn595Tyr]; XP_008198893.1:p.[Asn593Tyr]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1810,"NC_007425.3",6234959,"SNV","C","T","Heterozygous",10,34,29.41,1,2,9,0.18,39.4,11,36,8,9,1.46,0.04,0.6,"no","C/T","No",1,48.14,"XP_008198893.1:c.[1648G>A]; XP_008198892.1:c.[1654G>A]","XP_008198893.1:p.[Asp550Asn]; XP_008198892.1:p.[Asp552Asn]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1811,"NC_007425.3","6235088..6235089","MNV","TA","AT","Heterozygous",9,29,31.03,1,5,4,0.44,39.39,9,29,7,6,0.07,0.98,1,"no","complex","No",1,200,"XP_008198893.1:c.[1518_1519delTAinsAT]; XP_008198892.1:c.[1524_1525delTAinsAT]","XP_008198893.1:p.[Asn506_Ile507delinsLysLeu]; XP_008198892.1:p.[Asn508_Ile509delinsLysLeu]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1812,"NC_007425.3",6235141,"SNV","C","T","Heterozygous",9,23,39.13,1,4,5,0.44,40,9,23,8,7,1.76,0.27,1,"no","C/T","No",1,63.31,"XP_008198893.1:c.[1466G>A]; XP_008198892.1:c.[1472G>A]","XP_008198893.1:p.[Arg489His]; XP_008198892.1:p.[Arg491His]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1813,"NC_007425.3",6235222,"SNV","A","G","Heterozygous",19,53,35.85,1,9,13,0.41,38.37,22,62,13,13,-1.32,0.99,0.98,"no","A/G","No",1,108.51,"XP_008198893.1:c.[1385T>C]; XP_008198892.1:c.[1391T>C]","XP_008198893.1:p.[Phe462Ser]; XP_008198892.1:p.[Phe464Ser]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1814,"NC_007425.3",6235250,"SNV","A","C","Heterozygous",12,51,23.53,1,10,7,0.41,38.42,17,66,10,9,-0.82,0.06,0.4,"no","A/C","No",1,24.49,"XP_008198893.1:c.[1357T>G]; XP_008198892.1:c.[1363T>G]","XP_008198893.1:p.[Trp453Gly]; XP_008198892.1:p.[Trp455Gly]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1815,"NC_007425.3",6235257,"Deletion","A","-","Heterozygous",22,48,45.83,1,12,20,0.38,37.91,32,61,13,14,-1.26,0.42,1,"no","-/A","No",1,148.75,"XP_008198892.1:c.[1356delT]; XP_008198893.1:c.[1350delT]","XP_008198892.1:p.[Asp452fs]; XP_008198893.1:p.[Asp450fs]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1816,"NC_007425.3",6235259,"SNV","C","A","Heterozygous",23,49,46.94,1,12,21,0.36,39.04,33,62,14,15,-1.3,0.34,1,"no","A/C","No",1,200,"XP_008198892.1:c.[1354G>T]; XP_008198893.1:c.[1348G>T]","XP_008198892.1:p.[Asp452Tyr]; XP_008198893.1:p.[Asp450Tyr]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1817,"NC_007425.3","6235261..6235262","Deletion","TC","-","Heterozygous",23,47,48.94,1,12,21,0.36,38.39,33,60,23,21,-2.5,0.72,1,"no","complex","No",1,200,"XP_008198893.1:c.[1345_1346delGA]; XP_008198892.1:c.[1351_1352delGA]","XP_008198893.1:p.[Glu449fs]; XP_008198892.1:p.[Glu451fs]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1818,"NC_007425.3",6235290,"SNV","G","T","Heterozygous",19,27,70.37,1,11,11,0.5,40.11,22,35,15,15,3.05,0.73,1,"no","G/T","No",1,40.11,"XP_008198892.1:c.[1323C>A]; XP_008198893.1:c.[1317C>A]","XP_008198892.1:p.[Asp441Glu]; XP_008198893.1:p.[Asp439Glu]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1819,"NC_007425.3",6235432,"SNV","T","C","Heterozygous",8,23,34.78,1,5,3,0.38,38.88,8,24,7,7,0.55,0.73,0.98,"no","C/T","No",1,51.78,"XP_008198893.1:c.[1175A>G]; XP_008198892.1:c.[1181A>G]","XP_008198893.1:p.[Asn392Ser]; XP_008198892.1:p.[Asn394Ser]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1820,"NC_007425.3","6235455..6235456","MNV","CT","TG","Heterozygous",11,24,45.83,1,8,5,0.38,38.18,13,27,11,10,0.76,0.82,0.99,"no","complex","No",1,200,"XP_008198893.1:c.[1151_1152delAGinsCA]; XP_008198892.1:c.[1157_1158delAGinsCA]","XP_008198893.1:p.[Lys384Thr]; XP_008198892.1:p.[Lys386Thr]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1821,"NC_007425.3",6235460,"SNV","C","T","Heterozygous",13,22,59.09,1,8,7,0.47,36.69,15,28,10,10,0.33,0.88,1,"no","C/T","No",1,67.4,"XP_008198892.1:c.[1153G>A]; XP_008198893.1:c.[1147G>A]","XP_008198892.1:p.[Val385Ile]; XP_008198893.1:p.[Val383Ile]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1822,"NC_007425.3",6235481,"SNV","C","T","Heterozygous",10,22,45.45,1,5,8,0.38,37.4,13,29,9,7,-0.07,0.9,1,"no","C/T","No",1,78.86,"XP_008198892.1:c.[1132G>A]; XP_008198893.1:c.[1126G>A]","XP_008198892.1:p.[Glu378Lys]; XP_008198893.1:p.[Glu376Lys]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1823,"NC_007425.3",6417139,"SNV","C","T","Heterozygous",7,30,23.33,0.99,4,4,0.5,37.29,8,33,5,5,-0.59,0.21,0.94,"no","C/T","No",1,18.45,"XP_008198904.2:c.674G>A","XP_008198904.2:p.Ser225Asn","LOC656408",656408,null,"656408 [Gene Symbol: LOC656408] [Locus Tag: TcasGA2_TC011024] [Chromosome: LG10] [Map Location: ] [Description: heat shock protein 75 kDa, mitochondrial] [Gene Type: protein-coding]","LOC656408; TcasGA2_TC011024"]
[1824,"NC_007425.3",6417541,"SNV","G","A","Heterozygous",11,28,39.29,1,5,7,0.42,37.27,12,35,6,8,0.31,0.91,0.98,"no","A/G","No",1,75.13,"XP_008198904.2:c.272C>T","XP_008198904.2:p.Ser91Leu","LOC656408",656408,null,"656408 [Gene Symbol: LOC656408] [Locus Tag: TcasGA2_TC011024] [Chromosome: LG10] [Map Location: ] [Description: heat shock protein 75 kDa, mitochondrial] [Gene Type: protein-coding]","LOC656408; TcasGA2_TC011024"]
[1825,"NC_007425.3",6417614,"SNV","G","T","Homozygous",34,34,100,1,13,29,0.31,38.32,42,42,19,25,null,1,1,"no","T/T","No",1,123.81,"XP_008198904.2:c.199C>A","XP_008198904.2:p.Gln67Lys","LOC656408",656408,null,"656408 [Gene Symbol: LOC656408] [Locus Tag: TcasGA2_TC011024] [Chromosome: LG10] [Map Location: ] [Description: heat shock protein 75 kDa, mitochondrial] [Gene Type: protein-coding]","LOC656408; TcasGA2_TC011024"]
[1826,"NC_007425.3","6631101..6631102","MNV","TT","AA","Homozygous",31,31,100,1,21,19,0.47,37.69,40,40,18,23,null,1,1,"no","AA/AA","No",1,200,"XP_015839633.1:c.[446+25680_446+25681delTTinsAA]; XP_008198929.1:c.[137+25366_137+25367delTTinsAA]; XP_008198930.1:c.[113+25680_113+25681delTTinsAA]; XP_015839634.1:c.[113+25680_113+25681delTTinsAA]; XP_015839635.1:c.[107+25680_107+25681delTTinsAA]; XP_015839643.1:c.[468_469delAAinsTT]","XP_015839643.1:p.Lys156_Ile157delinsAsnPhe","LOC100141873, LOC107398784","100141873 , 107398784",null,"100141873 [Gene Symbol: LOC100141873] [Locus Tag: TcasGA2_TC011464] [Chromosome: LG10] [Map Location: ] [Description: GRAM domain-containing protein 3] [Gene Type: protein-coding] || 107398784 [Gene Symbol: LOC107398784] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398784] [Gene Type: protein-coding]","LOC100141873; TcasGA2_TC011464 || LOC107398784"]
[1827,"NC_007425.3",6631107,"SNV","T","C","Homozygous",31,31,100,1,21,19,0.47,37.55,40,40,16,18,null,1,1,"no","C/C","No",1,113.22,"XP_008198930.1:c.[113+25686T>C]; XP_015839634.1:c.[113+25686T>C]; XP_015839633.1:c.[446+25686T>C]; XP_008198929.1:c.[137+25372T>C]; XP_015839635.1:c.[107+25686T>C]; XP_015839643.1:c.[463A>G]","XP_015839643.1:p.Lys155Glu","LOC100141873, LOC107398784","100141873 , 107398784",null,"100141873 [Gene Symbol: LOC100141873] [Locus Tag: TcasGA2_TC011464] [Chromosome: LG10] [Map Location: ] [Description: GRAM domain-containing protein 3] [Gene Type: protein-coding] || 107398784 [Gene Symbol: LOC107398784] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398784] [Gene Type: protein-coding]","LOC100141873; TcasGA2_TC011464 || LOC107398784"]
[1828,"NC_007425.3",6631133,"SNV","A","C","Homozygous",26,26,100,1,14,21,0.4,36.31,35,35,14,14,null,1,1,"no","C/C","No",1,98.17,"XP_015839634.1:c.[113+25712A>C]; XP_015839635.1:c.[107+25712A>C]; XP_008198929.1:c.[137+25398A>C]; XP_008198930.1:c.[113+25712A>C]; XP_015839633.1:c.[446+25712A>C]; XP_015839643.1:c.[437T>G]","XP_015839643.1:p.Leu146Trp","LOC100141873, LOC107398784","100141873 , 107398784",null,"100141873 [Gene Symbol: LOC100141873] [Locus Tag: TcasGA2_TC011464] [Chromosome: LG10] [Map Location: ] [Description: GRAM domain-containing protein 3] [Gene Type: protein-coding] || 107398784 [Gene Symbol: LOC107398784] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398784] [Gene Type: protein-coding]","LOC100141873; TcasGA2_TC011464 || LOC107398784"]
[1829,"NC_007425.3",6899709,"SNV","T","C","Heterozygous",9,24,37.5,1,2,7,0.22,38.44,9,24,5,5,-0.89,0.56,0.83,"no","C/T","No",1,61.84,"NP_001164314.1:c.427A>G","NP_001164314.1:p.Thr143Ala","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1830,"NC_007425.3",6899808,"SNV","G","T","Heterozygous",11,24,45.83,1,6,8,0.43,36.91,14,28,6,8,-0.7,0.43,0.99,"no","G/T","No",1,82.74,"NP_001164314.1:c.328C>A","NP_001164314.1:p.Gln110Lys","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1831,"NC_007425.3",6899922,"SNV","A","T","Homozygous",21,25,84,0.98,2,20,0.09,38.1,22,28,9,9,0.37,0.87,0.92,"no","T/T","No",1,16.16,"NP_001164314.1:c.214T>A","NP_001164314.1:p.Ser72Thr","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1832,"NC_007425.3",6964172,"SNV","G","A","Homozygous",17,21,80.95,0.81,3,14,0.18,36.76,17,21,8,10,-0.49,0.73,0.71,"no","A/G","No",1,7.17,"XP_008200311.1:c.[1495G>A]; XP_015839693.1:c.[1534G>A]; XP_966698.2:c.[1624G>A]","XP_008200311.1:p.[Ala499Thr]; XP_015839693.1:p.[Ala512Thr]; XP_966698.2:p.[Ala542Thr]","LOC656993",656993,null,"656993 [Gene Symbol: LOC656993] [Locus Tag: TcasGA2_TC004380] [Chromosome: LG10] [Map Location: ] [Description: pyruvate kinase] [Gene Type: protein-coding]","LOC656993; TcasGA2_TC004380"]
[1833,"NW_015450228.1",3369,"SNV","T","C","Homozygous",26,26,100,1,12,25,0.32,35.88,37,37,16,16,null,1,1,"no","C/C","No",1,98.14,"XP_008201306.2:c.1669A>G","XP_008201306.2:p.Asn557Asp","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1834,"NW_015450228.1",3372,"SNV","G","A","Homozygous",27,27,100,1,12,24,0.33,36.78,36,36,18,18,null,1,1,"no","A/A","No",1,99.74,"XP_008201306.2:c.1666C>T","XP_008201306.2:p.Leu556Phe","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1835,"NW_015450228.1",3417,"SNV","T","C","Homozygous",24,27,88.89,1,6,20,0.23,37.58,26,29,18,19,null,1,1,"no","C/C","No",1,24.45,"XP_008201306.2:c.1621A>G","XP_008201306.2:p.Thr541Ala","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1836,"NW_015450228.1",4307,"SNV","C","A","Homozygous",19,23,82.61,0.52,19,3,0.14,38.42,22,26,12,13,-1.01,0.98,1,"no","A/C","No",1,3.17,"XP_008201306.2:c.1564G>T","XP_008201306.2:p.Gly522Cys","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1837,"NW_015450228.1",4360,"SNV","T","C","Heterozygous",6,30,20,1,6,0,0,37,6,36,4,3,null,0.23,0.54,"no","complex","No",1,200,"XP_008201306.2:c.1511A>G","XP_008201306.2:p.Asp504Gly","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1838,"NW_015450228.1","4360..4361","MNV","TC","CT","Heterozygous",24,30,80,1,23,8,0.26,36.98,31,37,21,23,null,0.98,0.99,"no","complex","No",1,200,"XP_008201306.2:c.1510_1511delGAinsAG","XP_008201306.2:p.Asp504Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1839,"NW_015450228.1",4399,"SNV","G","T","Homozygous",44,44,100,1,41,11,0.21,39.09,52,52,24,27,null,1,1,"no","T/T","No",1,153.53,"XP_008201306.2:c.1472C>A","XP_008201306.2:p.Thr491Asn","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1840,"NW_015450228.1",4592,"SNV","C","G","Heterozygous",40,56,71.43,1,27,22,0.45,38.33,49,65,22,23,2.11,0.96,0.99,"no","C/G","No",1,60.71,"XP_008201306.2:c.1279G>C","XP_008201306.2:p.Glu427Gln","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1841,"NW_015450228.1",4594,"SNV","T","G","Heterozygous",40,56,71.43,1,25,22,0.47,38.7,47,63,22,23,1.58,0.98,1,"no","G/T","No",1,57.34,"XP_008201306.2:c.1277A>C","XP_008201306.2:p.Lys426Thr","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1842,"NW_015450228.1","4795..4798","Replacement","ACCC","G","Homozygous",37,38,97.37,1,24,19,0.44,37.61,43,44,25,32,null,1,1,"no","G/G","No",1,200,"XP_008201306.2:c.1073_1076delGGGTinsC","XP_008201306.2:p.Arg358_Val359delinsPro","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1843,"NW_015450228.1",4878,"SNV","G","T","Homozygous",90,96,93.75,1,50,53,0.49,38.68,103,109,51,57,null,1,1,"no","T/T","No",1,159.55,"XP_008201306.2:c.993C>A","XP_008201306.2:p.Phe331Leu","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1844,"NW_015450228.1","4960..4961","MNV","CA","GG","Homozygous",67,67,100,1,34,44,0.44,37.4,78,78,43,46,null,1,1,"no","GG/GG","No",1,200,"XP_008201306.2:c.910_911delTGinsCC","XP_008201306.2:p.Cys304Pro","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1845,"NW_015450228.1",5176,"SNV","T","C","Homozygous",59,67,88.06,1,38,28,0.42,37.97,66,74,41,46,null,0.99,1,"no","C/C","No",1,71.98,"XP_008201306.2:c.695A>G","XP_008201306.2:p.Asn232Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1846,"NW_015450228.1",5270,"SNV","T","G","Homozygous",52,60,86.67,1,20,34,0.37,39.12,54,62,32,34,null,0.99,1,"no","G/G","No",1,55.94,"XP_008201306.2:c.601A>C","XP_008201306.2:p.Ile201Leu","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1847,"NW_015450228.1",5279,"SNV","A","G","Homozygous",61,61,100,1,26,39,0.4,38.98,65,65,37,39,null,1,1,"no","G/G","No",1,200,"XP_008201306.2:c.592T>C","XP_008201306.2:p.Tyr198His","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1848,"NW_015450228.1",5461,"SNV","C","G","Homozygous",51,51,100,1,29,27,0.48,38.76,56,56,34,38,null,1,1,"no","G/G","No",1,159.55,"XP_008201306.2:c.410G>C","XP_008201306.2:p.Gly137Ala","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1849,"NW_015450228.1",5498,"SNV","T","C","Homozygous",62,62,100,1,36,40,0.47,37.9,76,76,38,39,null,1,1,"no","C/C","No",1,159.55,"XP_008201306.2:c.373A>G","XP_008201306.2:p.Ile125Val","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1850,"NW_015450228.1",5582,"SNV","G","A","Homozygous",54,57,94.74,1,30,33,0.48,36.74,63,67,35,33,null,1,1,"no","A/A","No",1,106.82,"XP_008201306.2:c.289C>T","XP_008201306.2:p.Gln97*","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1851,"NW_015450228.1",5615,"SNV","G","A","Homozygous",53,53,100,1,32,31,0.49,38.3,63,63,30,29,null,1,1,"no","A/A","No",1,159.55,"XP_008201306.2:c.256C>T","XP_008201306.2:p.Pro86Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1852,"NW_015450228.1",5627,"SNV","C","T","Homozygous",57,57,100,1,32,35,0.48,38.46,67,67,30,31,null,1,1,"no","T/T","No",1,156.54,"XP_008201306.2:c.244G>A","XP_008201306.2:p.Glu82Lys","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1853,"NW_015450228.1","5708^5709","Insertion","-","G","Homozygous",51,51,100,1,11,51,0.18,38.57,62,62,26,26,null,1,1,"no","G/G","No",1,159.55,"XP_008201306.2:c.162_163insC","XP_008201306.2:p.Arg55fs","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1854,"NW_015450233.1",266604,"SNV","G","C","Heterozygous",11,23,47.83,1,2,9,0.18,36.64,11,23,5,4,0.18,0.2,0.62,"no","C/G","No",1,88.64,"XP_001807794.1:c.[594G>C]; XP_008198752.1:c.[594G>C]","XP_001807794.1:p.[Glu198Asp]; XP_008198752.1:p.[Glu198Asp]","LOC656073",656073,null,"656073 [Gene Symbol: LOC656073] [Locus Tag: TcasGA2_TC011371] [Chromosome: LG10] [Map Location: ] [Description: chondroitin sulfate synthase 1] [Gene Type: protein-coding]","TcasGA2_TC011371; LOC656073"]
[1855,"NW_015450233.1",274604,"SNV","G","A","Homozygous",20,20,100,1,14,13,0.48,35.6,27,27,11,12,null,1,1,"no","A/A","No",1,78.69,"NP_001128383.1:c.691G>A","NP_001128383.1:p.Asp231Asn","Mrpl1",656160,"mitochondrial ribosomal protein L1","656160 [Gene Symbol: Mrpl1] [Locus Tag: TcasGA2_TC011372] [Chromosome: LG10] [Map Location: ] [Description: mitochondrial ribosomal protein L1] [Gene Type: protein-coding]","TcasGA2_TC011372; Mrpl1"]
[1856,"NW_015450233.1",364305,"SNV","A","T","Homozygous",20,21,95.24,1,13,8,0.38,37.55,21,22,13,11,null,1,1,"no","T/T","No",1,55.05,"XP_008198754.1:c.[65-508A>T]; XP_015839845.1:c.[439T>A]","XP_015839845.1:p.Ser147Thr","LOC656828, LOC107398839","656828 , 107398839",null,"656828 [Gene Symbol: LOC656828] [Locus Tag: TcasGA2_TC011374] [Chromosome: LG10] [Map Location: ] [Description: protocadherin-15] [Gene Type: protein-coding] || 107398839 [Gene Symbol: LOC107398839] [Locus Tag: TcasGA2_TC030233] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398839] [Gene Type: protein-coding]","TcasGA2_TC011374; LOC656828 || TcasGA2_TC030233; TcGr144; LOC107398839"]
[1857,"NW_015450233.1",364312,"SNV","T","C","Homozygous",19,20,95,1,13,8,0.38,38.53,21,22,12,10,null,0.99,1,"no","C/C","No",1,51.01,"XP_008198754.1:c.[65-501T>C]; XP_015839845.1:c.[432A>G]","XP_015839845.1:p.Ile144Met","LOC656828, LOC107398839","656828 , 107398839",null,"656828 [Gene Symbol: LOC656828] [Locus Tag: TcasGA2_TC011374] [Chromosome: LG10] [Map Location: ] [Description: protocadherin-15] [Gene Type: protein-coding] || 107398839 [Gene Symbol: LOC107398839] [Locus Tag: TcasGA2_TC030233] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398839] [Gene Type: protein-coding]","TcasGA2_TC011374; LOC656828 || TcasGA2_TC030233; TcGr144; LOC107398839"]
[1858,"NW_015450233.1",407864,"SNV","G","A","Heterozygous",15,21,71.43,1,5,10,0.33,37.6,15,21,8,8,1.56,0.63,0.7,"no","A/G","No",1,31.77,"XP_968653.3:c.910G>A","XP_968653.3:p.Ala304Thr","LOC657080",657080,null,"657080 [Gene Symbol: LOC657080] [Locus Tag: TcasGA2_TC011376] [Chromosome: LG10] [Map Location: ] [Description: venom carboxylesterase-6] [Gene Type: protein-coding]","TcasGA2_TC011376; LOC657080"]
[1859,"NW_015450233.1",415466,"SNV","C","T","Heterozygous",5,22,22.73,0.97,2,3,0.4,37.6,5,22,4,4,-0.2,0.05,0.92,"no","C/T","No",1,15.28,"XP_008198760.1:c.1763G>A","XP_008198760.1:p.Arg588His","LOC657242",657242,null,"657242 [Gene Symbol: LOC657242] [Locus Tag: TcasGA2_TC011099] [Chromosome: LG10] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","LOC657242; TcasGA2_TC011099"]
[1860,"NW_015450233.1",416096,"SNV","C","T","Homozygous",20,20,100,1,15,9,0.38,37.75,24,24,12,12,null,1,1,"no","T/T","No",1,81.69,"XP_008198760.1:c.1133G>A","XP_008198760.1:p.Arg378Lys","LOC657242",657242,null,"657242 [Gene Symbol: LOC657242] [Locus Tag: TcasGA2_TC011099] [Chromosome: LG10] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","LOC657242; TcasGA2_TC011099"]
[1861,"NW_015450233.1",416100,"SNV","T","C","Homozygous",20,20,100,1,15,11,0.42,37.95,26,26,12,13,null,1,1,"no","C/C","No",1,80.12,"XP_008198760.1:c.1129A>G","XP_008198760.1:p.Ile377Val","LOC657242",657242,null,"657242 [Gene Symbol: LOC657242] [Locus Tag: TcasGA2_TC011099] [Chromosome: LG10] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","LOC657242; TcasGA2_TC011099"]
[1862,"NW_015450233.1",416151,"SNV","A","T","Homozygous",24,24,100,1,12,13,0.48,36.71,25,25,17,16,null,1,1,"no","T/T","No",1,93.73,"XP_008198760.1:c.1078T>A","XP_008198760.1:p.Ser360Thr","LOC657242",657242,null,"657242 [Gene Symbol: LOC657242] [Locus Tag: TcasGA2_TC011099] [Chromosome: LG10] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","LOC657242; TcasGA2_TC011099"]
[1863,"NW_015450233.1",499896,"SNV","C","T","Homozygous",25,25,100,1,19,9,0.32,37.32,28,28,16,17,null,1,1,"no","T/T","No",1,96.74,"XP_969311.1:c.166C>T","XP_969311.1:p.Leu56Phe","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1864,"NW_015450233.1",502365,"SNV","G","T","Homozygous",23,23,100,1,11,13,0.46,37.35,24,24,14,20,null,1,1,"no","T/T","No",1,90.72,"XP_969311.1:c.2635G>T","XP_969311.1:p.Ala879Ser","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1865,"NW_015450233.1",525721,"SNV","G","C","Heterozygous",15,23,65.22,1,3,12,0.2,37.8,15,23,5,7,0.26,0.27,0.92,"no","C/G","No",1,50.58,"XP_969459.1:c.227G>C","XP_969459.1:p.Ser76Thr","LOC657946",657946,null,"657946 [Gene Symbol: LOC657946] [Locus Tag: TcasGA2_TC011381] [Chromosome: LG10] [Map Location: ] [Description: CDGSH iron-sulfur domain-containing protein 2 homolog] [Gene Type: protein-coding]","TcasGA2_TC011381; LOC657946"]
[1866,"NW_015450233.1",526434,"SNV","A","G","Homozygous",21,21,100,1,14,8,0.36,37.62,22,22,11,14,null,1,1,"no","G/G","No",1,83.1,"XP_008198771.1:c.464T>C","XP_008198771.1:p.Leu155Pro","LOC103314450",103314450,null,"103314450 [Gene Symbol: LOC103314450] [Locus Tag: TcasGA2_TC011094] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314450; TcasGA2_TC011094"]
[1867,"NW_015450233.1",540554,"SNV","A","G","Homozygous",22,23,95.65,1,11,15,0.42,38.45,26,27,9,16,null,1,1,"no","G/G","No",1,59.86,"XP_008198772.1:c.[41-1351T>C]; XP_015839863.1:c.[193A>G]","XP_015839863.1:p.Ile65Val","LOC658334, LOC107398847","658334 , 107398847",null,"658334 [Gene Symbol: LOC658334] [Locus Tag: TcasGA2_TC011092] [Chromosome: LG10] [Map Location: ] [Description: xaa-Pro aminopeptidase 1] [Gene Type: protein-coding] || 107398847 [Gene Symbol: LOC107398847] [Locus Tag: TcasGA2_TC011384] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398847] [Gene Type: protein-coding]","TcasGA2_TC011092; LOC658334 || LOC107398847; TcasGA2_TC011384"]
[1868,"NW_015450233.1",614605,"SNV","G","C","Homozygous",21,21,100,1,8,16,0.33,37.62,24,24,8,9,null,1,1,"no","C/C","No",1,83.12,"XP_015839840.1:c.[639G>C]; XP_970426.1:c.[639G>C]","XP_015839840.1:p.[Glu213Asp]; XP_970426.1:p.[Glu213Asp]","LOC658992",658992,null,"658992 [Gene Symbol: LOC658992] [Locus Tag: TcasGA2_TC011388] [Chromosome: LG10] [Map Location: ] [Description: dynactin subunit 4] [Gene Type: protein-coding]","Dctn4; TcasGA2_TC011388; p62; LOC658992"]
[1869,"NW_015450233.1",801378,"SNV","A","G","Homozygous",20,20,100,1,9,12,0.43,37.2,21,21,13,17,null,1,1,"no","G/G","No",1,80.09,"XP_015839816.1:c.[7348A>G]; XP_015839823.1:c.[6898A>G]; XP_015839814.1:c.[7339A>G]; XP_015839817.1:c.[7315A>G]; XP_015839828.1:c.[2569A>G]; XP_015839830.1:c.[2167A>G]; XP_015839811.1:c.[7348A>G]; XP_015839818.1:c.[7282A>G]; XP_015839824.1:c.[6898A>G]; XP_015839826.1:c.[7348A>G]; XP_015839820.1:c.[7219A>G]; XP_015839827.1:c.[2698A>G]; XP_015839821.1:c.[7015A>G]; XP_015839812.1:c.[7348A>G]; XP_015839819.1:c.[7249A>G]; XP_015839825.1:c.[7348A>G]; XP_015839813.1:c.[7339A>G]; XP_015839815.1:c.[7348A>G]; XP_015839829.1:c.[2272A>G]","XP_015839816.1:p.[Thr2450Ala]; XP_015839823.1:p.[Thr2300Ala]; XP_015839814.1:p.[Thr2447Ala]; XP_015839817.1:p.[Thr2439Ala]; XP_015839828.1:p.[Thr857Ala]; XP_015839830.1:p.[Thr723Ala]; XP_015839811.1:p.[Thr2450Ala]; XP_015839818.1:p.[Thr2428Ala]; XP_015839824.1:p.[Thr2300Ala]; XP_015839826.1:p.[Thr2450Ala]; XP_015839820.1:p.[Thr2407Ala]; XP_015839827.1:p.[Thr900Ala]; XP_015839821.1:p.[Thr2339Ala]; XP_015839812.1:p.[Thr2450Ala]; XP_015839819.1:p.[Thr2417Ala]; XP_015839825.1:p.[Thr2450Ala]; XP_015839813.1:p.[Thr2447Ala]; XP_015839815.1:p.[Thr2450Ala]; XP_015839829.1:p.[Thr758Ala]","LOC659365",659365,null,"659365 [Gene Symbol: LOC659365] [Locus Tag: TcasGA2_TC011393] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC659365] [Gene Type: protein-coding]","LOC659365; TcasGA2_TC011393"]
[1870,"NW_015450233.1",830189,"SNV","G","A","Heterozygous",11,26,42.31,1,8,5,0.38,37.55,13,28,6,9,-0.88,0.13,0.22,"no","A/G","No",1,80.58,"XP_008198786.1:c.[923G>A]; XP_015839834.1:c.[923G>A]","XP_008198786.1:p.[Ser308Asn]; XP_015839834.1:p.[Ser308Asn]","LOC659439",659439,null,"659439 [Gene Symbol: LOC659439] [Locus Tag: TcasGA2_TC011395] [Chromosome: Un] [Map Location: ] [Description: venom carboxylesterase-6] [Gene Type: protein-coding]","LOC659439; TcasGA2_TC011395"]
[1871,"NW_015450233.1",871607,"SNV","A","C","Homozygous",23,23,100,1,16,12,0.43,36.74,28,28,11,14,null,1,1,"no","C/C","No",1,89.14,"XP_008198741.1:c.770A>C","XP_008198741.1:p.His257Pro","LOC103314438",103314438,null,"103314438 [Gene Symbol: LOC103314438] [Locus Tag: TcasGA2_TC011398] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314438; TcasGA2_TC011398"]
[1872,"NW_015450233.1",871618,"SNV","A","G","Homozygous",20,20,100,1,9,12,0.43,37.35,21,21,8,12,null,1,1,"no","G/G","No",1,80.09,"XP_008198741.1:c.781A>G","XP_008198741.1:p.Ile261Val","LOC103314438",103314438,null,"103314438 [Gene Symbol: LOC103314438] [Locus Tag: TcasGA2_TC011398] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314438; TcasGA2_TC011398"]
[1873,"NW_015450233.1",871678,"SNV","G","A","Homozygous",23,23,100,1,14,12,0.46,36.13,26,26,13,13,null,1,1,"no","A/A","No",1,90.72,"XP_008198741.1:c.841G>A","XP_008198741.1:p.Asp281Asn","LOC103314438",103314438,null,"103314438 [Gene Symbol: LOC103314438] [Locus Tag: TcasGA2_TC011398] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314438; TcasGA2_TC011398"]
[1874,"NW_015450233.1",871970,"SNV","G","C","Homozygous",26,26,100,1,18,12,0.4,37.88,30,30,17,20,null,1,1,"no","C/C","No",1,98.17,"XP_008198741.1:c.1133G>C","XP_008198741.1:p.Gly378Ala","LOC103314438",103314438,null,"103314438 [Gene Symbol: LOC103314438] [Locus Tag: TcasGA2_TC011398] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314438; TcasGA2_TC011398"]
[1875,"NW_015450233.1",872947,"SNV","A","G","Homozygous",26,26,100,1,17,9,0.35,38.46,26,26,13,21,null,1,1,"no","G/G","No",1,98.15,"XP_008198741.1:c.2110A>G","XP_008198741.1:p.Thr704Ala","LOC103314438",103314438,null,"103314438 [Gene Symbol: LOC103314438] [Locus Tag: TcasGA2_TC011398] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314438; TcasGA2_TC011398"]
[1876,"NW_015450289.1",62725,"SNV","G","T","Homozygous",21,21,100,1,11,13,0.46,37,24,24,11,11,null,1,1,"no","T/T","No",1,84.71,"XP_008190865.1:c.1991G>T","XP_008190865.1:p.Gly664Val","LOC655982",655982,null,"655982 [Gene Symbol: LOC655982] [Locus Tag: TcasGA2_TC001977] [Chromosome: Un] [Map Location: ] [Description: indole-3-acetaldehyde oxidase] [Gene Type: protein-coding]","LOC655982; TcasGA2_TC001977"]
[1877,"NW_015450289.1",62773,"SNV","G","A","Homozygous",20,20,100,1,8,13,0.38,37,21,21,11,10,null,1,1,"no","A/A","No",1,81.69,"XP_008190865.1:c.2039G>A","XP_008190865.1:p.Gly680Asp","LOC655982",655982,null,"655982 [Gene Symbol: LOC655982] [Locus Tag: TcasGA2_TC001977] [Chromosome: Un] [Map Location: ] [Description: indole-3-acetaldehyde oxidase] [Gene Type: protein-coding]","LOC655982; TcasGA2_TC001977"]
[1878,"NW_015450289.1",63519,"SNV","C","G","Homozygous",21,21,100,1,16,7,0.3,36.48,23,23,9,15,null,1,1,"no","G/G","No",1,83.09,"XP_008190865.1:c.2741C>G","XP_008190865.1:p.Ala914Gly","LOC655982",655982,null,"655982 [Gene Symbol: LOC655982] [Locus Tag: TcasGA2_TC001977] [Chromosome: Un] [Map Location: ] [Description: indole-3-acetaldehyde oxidase] [Gene Type: protein-coding]","LOC655982; TcasGA2_TC001977"]
[1879,"NW_015450315.1",81501,"SNV","C","T","Homozygous",20,20,100,1,11,10,0.48,37.55,21,21,13,15,null,1,1,"no","T/T","No",1,81.69,"XP_001810078.1:c.4028G>A","XP_001810078.1:p.Arg1343His","LOC100142562",100142562,null,"100142562 [Gene Symbol: LOC100142562] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 297] [Gene Type: protein-coding]","LOC100142562"]
[1880,"NW_015450315.1",81616,"SNV","G","A","Heterozygous",8,27,29.63,1,6,3,0.33,38.38,9,31,4,4,0.5,0.63,1,"no","A/G","No",1,39.5,"XP_001810078.1:c.3913C>T","XP_001810078.1:p.Pro1305Ser","LOC100142562",100142562,null,"100142562 [Gene Symbol: LOC100142562] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 297] [Gene Type: protein-coding]","LOC100142562"]
[1881,"NW_015450315.1",81717,"SNV","G","A","Homozygous",22,25,88,0.98,15,11,0.42,36.91,26,29,11,14,null,0.99,1,"no","A/A","No",1,17.74,"XP_001810078.1:c.3812C>T","XP_001810078.1:p.Ala1271Val","LOC100142562",100142562,null,"100142562 [Gene Symbol: LOC100142562] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 297] [Gene Type: protein-coding]","LOC100142562"]
[1882,"NW_015450315.1",82559,"SNV","A","T","Heterozygous",10,20,50,1,4,6,0.4,38.7,10,20,6,8,1.51,0.35,1,"no","A/T","No",1,81.47,"XP_001810078.1:c.2970T>A","XP_001810078.1:p.Asn990Lys","LOC100142562",100142562,null,"100142562 [Gene Symbol: LOC100142562] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 297] [Gene Type: protein-coding]","LOC100142562"]
[1883,"NW_015450315.1",84171,"SNV","A","G","Heterozygous",9,28,32.14,1,7,5,0.42,37.89,12,32,7,7,-0.37,0.29,0.97,"no","A/G","No",1,50.52,"XP_001810078.1:c.1358T>C","XP_001810078.1:p.Val453Ala","LOC100142562",100142562,null,"100142562 [Gene Symbol: LOC100142562] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 297] [Gene Type: protein-coding]","LOC100142562"]
[1884,"NW_015450366.1","2812..2813","MNV","CT","TC","Heterozygous",6,24,25,1,5,1,0.17,39.75,6,24,4,4,2.2,0.09,0.45,"no","complex","No",1,200,"XP_015839907.1:c.[587_588delCTinsTC]; XP_015839908.1:c.[587_588delCTinsTC]; XP_015839906.1:c.[587_588delCTinsTC]","XP_015839907.1:p.[Pro196Leu]; XP_015839908.1:p.[Pro196Leu]; XP_015839906.1:p.[Pro196Leu]","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1885,"NW_015450366.1",2931,"SNV","A","G","Heterozygous",14,32,43.75,1,8,8,0.5,37.57,16,37,13,13,0.17,1,1,"no","A/G","No",1,103.16,"XP_015839907.1:c.[603+103A>G]; XP_015839908.1:c.[603+103A>G]; XP_015839906.1:c.[706A>G]","XP_015839906.1:p.Ile236Val","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1886,"NW_015450366.1",2934,"SNV","A","G","Heterozygous",14,36,38.89,1,8,8,0.5,39.57,16,42,13,13,0.37,0.95,1,"no","A/G","No",1,92.06,"XP_015839908.1:c.[603+106A>G]; XP_015839907.1:c.[603+106A>G]; XP_015839906.1:c.[709A>G]","XP_015839906.1:p.Lys237Glu","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1887,"NW_015450366.1",2952,"SNV","G","C","Heterozygous",18,45,40,1,10,10,0.5,38.22,20,54,15,16,0.89,0.89,0.93,"no","C/G","No",1,116.93,"XP_015839907.1:c.[603+124G>C]; XP_015839906.1:c.[727G>C]; XP_015839908.1:c.[603+124G>C]","XP_015839906.1:p.Ala243Pro","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1888,"NW_015450366.1",2961,"SNV","C","T","Heterozygous",14,46,30.43,1,9,7,0.44,38.71,16,54,11,12,0.87,0.88,0.87,"no","C/T","No",1,62.86,"XP_015839907.1:c.[603+133C>T]; XP_015839906.1:c.[736C>T]; XP_015839908.1:c.[603+133C>T]","XP_015839906.1:p.Pro246Ser","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1889,"NW_015450366.1",2986,"SNV","T","G","Heterozygous",12,37,32.43,1,6,7,0.46,38.58,13,39,8,8,-0.02,0.58,1,"no","G/T","No",1,63.35,"XP_015839907.1:c.[603+158T>G]; XP_015839906.1:c.[761T>G]; XP_015839908.1:c.[603+158T>G]","XP_015839906.1:p.Met254Arg","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1890,"NW_015450366.1",2998,"SNV","A","C","Heterozygous",13,31,41.94,1,7,6,0.46,37.38,13,33,9,9,-0.12,0.73,0.97,"no","A/C","No",1,92.97,"XP_015839907.1:c.[603+170A>C]; XP_015839908.1:c.[603+170A>C]; XP_015839906.1:c.[773A>C]","XP_015839906.1:p.*258Ser","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1891,"NW_015450366.1",4667,"SNV","C","T","Homozygous",26,28,92.86,1,14,14,0.5,37.27,28,30,14,16,null,0.99,1,"no","T/T","No",1,41.17,"XP_015839908.1:c.[604-804C>T]; XP_015839907.1:c.[631C>T]","XP_015839907.1:p.Pro211Ser","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1892,"NW_015450366.1",4677,"SNV","G","A","Homozygous",24,25,96,1,15,11,0.42,37.71,26,27,12,16,null,1,1,"no","A/A","No",1,64.65,"XP_015839907.1:c.[641G>A]; XP_015839908.1:c.[604-794G>A]","XP_015839907.1:p.Arg214His","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1893,"NW_015450366.1",4733,"SNV","C","T","Heterozygous",13,21,61.9,1,4,9,0.31,37.15,13,22,8,12,-0.47,0.91,0.99,"no","C/T","No",1,57.44,"XP_015839908.1:c.[604-738C>T]; XP_015839907.1:c.[697C>T]","XP_015839907.1:p.His233Tyr","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1894,"NW_015450438.1",73231,"SNV","A","G","Homozygous",30,30,100,1,22,14,0.39,37.33,36,36,15,18,null,1,1,"no","G/G","No",1,110.18,"XP_008201414.1:c.[511A>G]; XP_971439.1:c.[514A>G]","XP_008201414.1:p.[Ile171Val]; XP_971439.1:p.[Ile172Val]","LOC660084",660084,null,"660084 [Gene Symbol: LOC660084] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: protein Wnt-8a] [Gene Type: protein-coding]","LOC660084; Wnt8/D"]
[1895,"NW_015450438.1",93416,"SNV","A","C","Heterozygous",13,34,38.24,1,11,2,0.15,38.62,13,36,8,12,-0.94,0.91,0.88,"no","A/C","No",1,84.67,"XP_015839917.1:c.[664T>G]; XP_015839918.1:c.[565T>G]","XP_015839917.1:p.[*222Glu]; XP_015839918.1:p.[*189Glu]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1896,"NW_015450438.1",93457,"SNV","T","C","Homozygous",21,21,100,1,17,5,0.23,37.43,22,22,11,17,null,1,1,"no","C/C","No",1,83.13,"XP_015839918.1:c.[524A>G]; XP_015839917.1:c.[623A>G]","XP_015839918.1:p.[Glu175Gly]; XP_015839917.1:p.[Glu208Gly]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1897,"NW_015450438.1",93464,"SNV","C","T","Heterozygous",9,20,45,1,8,4,0.33,36,12,24,4,9,-1.14,0.6,1,"no","C/T","No",1,71.72,"XP_015839918.1:c.[517G>A]; XP_015839917.1:c.[616G>A]","XP_015839918.1:p.[Asp173Asn]; XP_015839917.1:p.[Asp206Asn]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1898,"NW_015450438.1",93470,"SNV","T","C","Heterozygous",11,22,50,1,8,6,0.43,36.09,14,26,5,10,-1.51,0.68,0.97,"no","C/T","No",1,89.14,"XP_015839917.1:c.[610A>G]; XP_015839918.1:c.[511A>G]","XP_015839917.1:p.[Ile204Val]; XP_015839918.1:p.[Ile171Val]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1899,"NW_015450438.1",93533,"SNV","G","A","Heterozygous",18,35,51.43,1,9,10,0.47,38.67,19,36,12,13,-0.81,0.35,0.96,"no","A/G","No",1,132.75,"XP_015839918.1:c.[448C>T]; XP_015839917.1:c.[547C>T]","XP_015839918.1:p.[Pro150Ser]; XP_015839917.1:p.[Pro183Ser]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1900,"NW_015450438.1",93810,"SNV","C","T","Homozygous",29,29,100,1,6,24,0.2,37.83,30,30,20,15,null,1,1,"no","T/T","No",1,108.77,"XP_015839917.1:c.[325G>A]; XP_015839918.1:c.[226G>A]","XP_015839917.1:p.[Ala109Thr]; XP_015839918.1:p.[Ala76Thr]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1901,"NW_015450438.1","94107^94108","Insertion","-","T","Heterozygous",16,24,66.67,1,5,13,0.28,38.19,18,28,9,11,0.95,0.97,1,"no","-/T","Yes",8,27.1,"XP_015839918.1:c.[16-29_16-28insA]; XP_015839917.1:c.[86_87insA]","XP_015839917.1:p.Phe30fs","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1902,"NW_015450438.1","94120..94123","Deletion","GTAA","-","Heterozygous",9,22,40.91,1,2,8,0.2,37.11,10,23,7,9,-4.84,0.27,0.93,"no","complex","No",1,200,"XP_015839917.1:c.[71_74delTTAC]; XP_015839918.1:c.[16-44_16-41delTTAC]","XP_015839917.1:p.Leu24fs","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1903,"NW_015450438.1",94130,"SNV","T","G","Heterozygous",10,23,43.48,1,3,8,0.27,38.4,11,24,6,8,-0.25,0.27,0.86,"no","G/T","No",1,76.8,"XP_015839918.1:c.[16-51A>C]; XP_015839917.1:c.[64A>C]","XP_015839917.1:p.Asn22His","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1904,"NW_015450462.1",11443,"SNV","C","G","Homozygous",32,32,100,1,24,12,0.33,38.34,36,36,17,25,null,1,1,"no","G/G","No",1,116.2,"XP_015839928.1:c.195C>G","XP_015839928.1:p.Ser65Arg","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1905,"NW_015450462.1",12310,"SNV","T","C","Homozygous",26,26,100,1,17,16,0.48,38.5,33,33,17,20,null,1,1,"no","C/C","No",1,98.16,"XP_015839928.1:c.871T>C","XP_015839928.1:p.*291Gln","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1906,"NW_015450462.1",12620,"SNV","C","T","Heterozygous",8,25,32,1,5,3,0.38,38.12,8,27,6,6,-0.15,0.16,0.58,"no","C/T","No",1,44.96,"XP_015839928.1:c.1181C>T","XP_015839928.1:p.Thr394Met","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1907,"NW_015450462.1",12752,"SNV","C","T","Homozygous",41,41,100,1,19,28,0.4,38.27,47,47,21,24,null,1,1,"no","T/T","No",1,144.63,"XP_015839928.1:c.1313C>T","XP_015839928.1:p.Thr438Ile","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1908,"NW_015450462.1",12812,"SNV","T","C","Homozygous",33,33,100,1,18,18,0.5,38,36,36,19,25,null,1,1,"no","C/C","No",1,119.24,"XP_015839928.1:c.1373T>C","XP_015839928.1:p.Phe458Ser","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1909,"NW_015450462.1",17188,"SNV","C","G","Homozygous",30,30,100,1,12,19,0.39,37.57,31,31,16,19,null,1,1,"no","G/G","No",1,110.19,"XP_015839928.1:c.1748C>G","XP_015839928.1:p.Ala583Gly","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1910,"NW_015450462.1",18351,"SNV","G","C","Homozygous",25,25,100,1,14,15,0.48,37.52,29,29,15,15,null,1,1,"no","C/C","No",1,95.16,"XP_015839928.1:c.2633G>C","XP_015839928.1:p.*878Ser","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1911,"NW_015450462.1",20903,"SNV","C","T","Homozygous",29,29,100,1,16,17,0.48,37.83,33,33,17,17,null,1,1,"no","T/T","No",1,108.77,"XP_015839928.1:c.3437C>T","XP_015839928.1:p.Thr1146Met","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1912,"NW_015450498.1",11855,"SNV","G","A","Heterozygous",20,29,68.97,1,12,10,0.45,39,22,33,16,15,0.16,0.95,1,"no","A/G","No",1,47.76,"XP_008193089.1:c.[235C>T]; XP_015839934.1:c.[220C>T]","XP_008193089.1:p.[Pro79Ser]; XP_015839934.1:p.[Pro74Ser]","LOC103312938",103312938,null,"103312938 [Gene Symbol: LOC103312938] [Locus Tag: TcasGA2_TC031895] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312938] [Gene Type: protein-coding]","TcasGA2_TC031895; LOC103312938"]
[1913,"NW_015450592.1",6829,"SNV","C","G","Homozygous",21,21,100,1,16,10,0.38,35.57,26,26,12,16,null,1,1,"no","G/G","No",1,83.1,"XP_015839966.1:c.[490C>G]; XP_971501.1:c.[490C>G]","XP_015839966.1:p.[Leu164Val]; XP_971501.1:p.[Leu164Val]","LOC660149",660149,null,"660149 [Gene Symbol: LOC660149] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: protein regulator of cytokinesis 1] [Gene Type: protein-coding]","LOC660149"]
[1914,"NW_015450599.1",12609,"SNV","C","T","Heterozygous",9,22,40.91,1,6,4,0.4,40,10,26,6,6,1.14,0.7,0.89,"no","C/T","No",1,66.01,"XP_008195700.1:c.[944C>T]; XP_015839974.1:c.[1364C>T]","XP_008195700.1:p.[Ala315Val]; XP_015839974.1:p.[Ala455Val]","LOC103313649",103313649,null,"103313649 [Gene Symbol: LOC103313649] [Locus Tag: TcasGA2_TC032692] [Chromosome: Un] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","TcasGA2_TC032692; LOC103313649"]
[1915,"NW_015450599.1",52428,"SNV","A","T","Heterozygous",10,20,50,1,3,8,0.27,40.1,11,23,7,7,1.17,0.52,1,"no","A/T","No",1,81.48,"XP_015839972.1:c.[154T>A]; XP_008194708.1:c.[154T>A]; XP_015839973.1:c.[154T>A]; XP_008194256.1:c.[154T>A]; XP_008193772.1:c.[154T>A]; XP_008192782.1:c.[154T>A]; XP_015839970.1:c.[154T>A]; XP_008193269.1:c.[154T>A]; XP_967383.2:c.[154T>A]","XP_015839972.1:p.[Leu52Met]; XP_008194708.1:p.[Leu52Met]; XP_015839973.1:p.[Leu52Met]; XP_008194256.1:p.[Leu52Met]; XP_008193772.1:p.[Leu52Met]; XP_008192782.1:p.[Leu52Met]; XP_015839970.1:p.[Leu52Met]; XP_008193269.1:p.[Leu52Met]; XP_967383.2:p.[Leu52Met]","LOC655731",655731,null,"655731 [Gene Symbol: LOC655731] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","LOC655731"]
[1916,"NW_015450599.1",52449,"SNV","C","T","Heterozygous",8,20,40,1,2,7,0.22,39.25,9,25,6,5,0.58,0.18,0.86,"no","C/T","No",1,58.87,"XP_008192782.1:c.[133G>A]; XP_015839972.1:c.[133G>A]; XP_008193772.1:c.[133G>A]; XP_967383.2:c.[133G>A]; XP_008194256.1:c.[133G>A]; XP_015839970.1:c.[133G>A]; XP_008193269.1:c.[133G>A]; XP_008194708.1:c.[133G>A]; XP_015839973.1:c.[133G>A]","XP_008192782.1:p.[Asp45Asn]; XP_015839972.1:p.[Asp45Asn]; XP_008193772.1:p.[Asp45Asn]; XP_967383.2:p.[Asp45Asn]; XP_008194256.1:p.[Asp45Asn]; XP_015839970.1:p.[Asp45Asn]; XP_008193269.1:p.[Asp45Asn]; XP_008194708.1:p.[Asp45Asn]; XP_015839973.1:p.[Asp45Asn]","LOC655731",655731,null,"655731 [Gene Symbol: LOC655731] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","LOC655731"]
[1917,"NW_015450599.1",52467,"SNV","C","G","Heterozygous",8,21,38.1,1,2,7,0.22,38.62,9,25,6,5,-0.04,0.2,0.94,"no","C/G","No",1,56.15,"XP_967383.2:c.[115G>C]; XP_015839970.1:c.[115G>C]; XP_008194708.1:c.[115G>C]; XP_008193772.1:c.[115G>C]; XP_008193269.1:c.[115G>C]; XP_008192782.1:c.[115G>C]; XP_008194256.1:c.[115G>C]; XP_015839972.1:c.[115G>C]; XP_015839973.1:c.[115G>C]","XP_967383.2:p.[Asp39His]; XP_015839970.1:p.[Asp39His]; XP_008194708.1:p.[Asp39His]; XP_008193772.1:p.[Asp39His]; XP_008193269.1:p.[Asp39His]; XP_008192782.1:p.[Asp39His]; XP_008194256.1:p.[Asp39His]; XP_015839972.1:p.[Asp39His]; XP_015839973.1:p.[Asp39His]","LOC655731",655731,null,"655731 [Gene Symbol: LOC655731] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","LOC655731"]
[1918,"NW_015450610.1",499,"SNV","G","C","Homozygous",27,27,100,1,13,16,0.45,37.41,29,29,16,19,null,1,1,"no","C/C","No",1,101.18,"XP_015839981.1:c.1283C>G","XP_015839981.1:p.Thr428Arg","LOC107398923",107398923,null,"107398923 [Gene Symbol: LOC107398923] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398923] [Gene Type: protein-coding]","LOC107398923"]
[1919,"NW_015450610.1",699,"SNV","C","T","Heterozygous",25,36,69.44,1,12,14,0.46,38.16,26,39,11,13,2.83,0.32,0.97,"no","C/T","No",1,53.74,"XP_015839981.1:c.[1083G>A]; XP_015839982.1:c.[1028G>A]","XP_015839982.1:p.[Arg343Lys]","LOC107398923",107398923,null,"107398923 [Gene Symbol: LOC107398923] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398923] [Gene Type: protein-coding]","LOC107398923"]
[1920,"NW_015450610.1",1354,"SNV","C","G","Homozygous",33,33,100,1,25,11,0.31,36.55,36,36,18,22,null,1,1,"no","G/G","No",1,119.21,"XP_015839981.1:c.[475G>C]; XP_015839982.1:c.[475G>C]","XP_015839981.1:p.[Ala159Pro]; XP_015839982.1:p.[Ala159Pro]","LOC107398923",107398923,null,"107398923 [Gene Symbol: LOC107398923] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398923] [Gene Type: protein-coding]","LOC107398923"]
[1921,"NW_015450678.1",10945,"SNV","C","A","Heterozygous",24,47,51.06,1,0,24,0,34.25,24,47,14,16,-2.94,0.81,1,"no","A/C","No",1,200,"XP_008193951.1:c.1052G>T","XP_008193951.1:p.Gly351Val","LOC100141955",100141955,null,"100141955 [Gene Symbol: LOC100141955] [Locus Tag: TcasGA2_TC031650] [Chromosome: Un] [Map Location: ] [Description: ORF 1] [Gene Type: protein-coding]","LOC100141955; TcasGA2_TC031650; gag"]
[1922,"NW_015450679.1",12121,"SNV","T","G","Heterozygous",9,20,45,1,4,6,0.4,38.22,10,21,4,5,0.63,0.21,0.51,"no","G/T","No",1,58.64,"XP_015839988.1:c.1926A>C","XP_015839988.1:p.Glu642Asp","LOC107398928",107398928,null,"107398928 [Gene Symbol: LOC107398928] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398928] [Gene Type: protein-coding]","LOC107398928"]
[1923,"NW_015450679.1",12925,"Deletion","C","-","Heterozygous",7,24,29.17,1,3,4,0.43,34.57,7,25,6,5,-2.64,0.35,0.84,"no","-/C","No",1,34.34,"XP_015839988.1:c.1122delG","XP_015839988.1:p.Trp374fs","LOC107398928",107398928,null,"107398928 [Gene Symbol: LOC107398928] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398928] [Gene Type: protein-coding]","LOC107398928"]
[1924,"NW_015450679.1",13177,"SNV","T","A","Heterozygous",17,26,65.38,1,7,10,0.41,38.41,17,26,9,14,2.48,0.9,1,"no","A/T","No",1,55.14,"XP_015839988.1:c.870A>T","XP_015839988.1:p.Glu290Asp","LOC107398928",107398928,null,"107398928 [Gene Symbol: LOC107398928] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398928] [Gene Type: protein-coding]","LOC107398928"]
[1925,"NW_015450679.1",13314,"SNV","A","C","Heterozygous",20,33,60.61,1,14,7,0.33,37.9,21,34,12,12,-0.72,0.68,1,"no","A/C","No",1,82.96,"XP_015839988.1:c.733T>G","XP_015839988.1:p.Leu245Val","LOC107398928",107398928,null,"107398928 [Gene Symbol: LOC107398928] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398928] [Gene Type: protein-coding]","LOC107398928"]
[1926,"NW_015450679.1",13370,"SNV","G","A","Heterozygous",7,30,23.33,0.99,7,0,0,38.86,7,30,3,5,1.72,0.02,0.02,"no","A/G","No",1,18.53,"XP_015839988.1:c.677C>T","XP_015839988.1:p.Ser226Leu","LOC107398928",107398928,null,"107398928 [Gene Symbol: LOC107398928] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398928] [Gene Type: protein-coding]","LOC107398928"]
[1927,"NW_015450689.1",70511,"SNV","T","C","Homozygous",20,20,100,1,10,10,0.5,37.1,20,20,14,15,null,1,1,"no","C/C","No",1,80.12,"XP_969159.1:c.2077T>C","XP_969159.1:p.Phe693Leu","LOC657615",657615,null,"657615 [Gene Symbol: LOC657615] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: SCY1-like protein 2] [Gene Type: protein-coding]","LOC657615"]
[1928,"NW_015450689.1",86526,"SNV","T","A","Homozygous",20,20,100,1,15,5,0.25,38.25,20,20,9,17,null,1,1,"no","A/A","No",1,81.69,"XP_968867.1:c.394T>A","XP_968867.1:p.Cys132Ser","LOC657307",657307,null,"657307 [Gene Symbol: LOC657307] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: cellular tumor antigen p53] [Gene Type: protein-coding]","LOC657307"]
[1929,"NW_015450689.1",86641,"SNV","G","C","Homozygous",20,20,100,1,5,17,0.23,37.3,22,22,9,12,null,1,1,"no","C/C","No",1,80.12,"XP_968867.1:c.509G>C","XP_968867.1:p.Ser170Thr","LOC657307",657307,null,"657307 [Gene Symbol: LOC657307] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: cellular tumor antigen p53] [Gene Type: protein-coding]","LOC657307"]
[1930,"NW_015450712.1","574..578","Replacement","ACCAC","GGT","Heterozygous",6,21,28.57,1,3,3,0.5,35.57,6,22,4,4,-2.31,0.39,0.91,"no","complex","No",1,200,"XP_008200092.1:c.227_231delGTGGTinsACC","XP_008200092.1:p.Cys76fs","LOC103314835",103314835,null,"103314835 [Gene Symbol: LOC103314835] [Locus Tag: TcasGA2_TC031666] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314835] [Gene Type: protein-coding]","LOC103314835; TcasGA2_TC031666"]
[1931,"NW_015450712.1","646..648","Deletion","CAC","-","Heterozygous",7,20,35,1,4,3,0.43,36.14,7,20,5,5,-2.03,0.32,0.56,"no","complex","No",1,200,"XP_008200092.1:c.157_159delGTG","XP_008200092.1:p.Val53del","LOC103314835",103314835,null,"103314835 [Gene Symbol: LOC103314835] [Locus Tag: TcasGA2_TC031666] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314835] [Gene Type: protein-coding]","LOC103314835; TcasGA2_TC031666"]
[1932,"NW_015450712.1",719,"SNV","T","A","Heterozygous",9,20,45,1,4,6,0.4,35.89,10,21,8,7,-0.91,0.84,0.99,"no","A/T","No",1,71.69,"XP_008200092.1:c.86A>T","XP_008200092.1:p.Glu29Val","LOC103314835",103314835,null,"103314835 [Gene Symbol: LOC103314835] [Locus Tag: TcasGA2_TC031666] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314835] [Gene Type: protein-coding]","LOC103314835; TcasGA2_TC031666"]
[1933,"NW_015450712.1",873,"SNV","T","C","Heterozygous",5,22,22.73,0.98,2,3,0.4,38.8,5,30,4,5,0.31,0.46,0.8,"no","C/T","No",1,16.47,"XP_008200092.1:c.4A>G","XP_008200092.1:p.Thr2Ala","LOC103314835",103314835,null,"103314835 [Gene Symbol: LOC103314835] [Locus Tag: TcasGA2_TC031666] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314835] [Gene Type: protein-coding]","LOC103314835; TcasGA2_TC031666"]
[1934,"NW_015450712.1",11213,"SNV","C","A","Homozygous",21,21,100,1,13,10,0.43,38.29,23,23,13,15,null,1,1,"no","A/A","No",1,84.7,"XP_015840002.1:c.550G>T","XP_015840002.1:p.Val184Phe","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1935,"NW_015450712.1",11299,"SNV","C","T","Homozygous",20,20,100,1,12,13,0.48,38.45,25,25,14,15,null,1,1,"no","T/T","No",1,81.69,"XP_015840002.1:c.464G>A","XP_015840002.1:p.Arg155Lys","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1936,"NW_015450712.1",11391,"SNV","A","T","Homozygous",27,27,100,1,18,10,0.36,38.56,28,28,16,22,null,1,1,"no","T/T","No",1,102.75,"XP_015840002.1:c.372T>A","XP_015840002.1:p.Asn124Lys","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1937,"NW_015450712.1",11558,"SNV","C","T","Heterozygous",13,32,40.62,1,6,7,0.46,39.54,13,33,7,10,2.19,0.48,1,"no","C/T","No",1,89.13,"XP_015840002.1:c.205G>A","XP_015840002.1:p.Gly69Ser","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1938,"NW_015450712.1",11561,"SNV","C","G","Heterozygous",15,34,44.12,1,8,7,0.47,39.6,15,35,8,12,0.69,0.52,0.98,"no","C/G","No",1,109.36,"XP_015840002.1:c.202G>C","XP_015840002.1:p.Ala68Pro","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1939,"NW_015450712.1","11570^11571","Insertion","-","TGG","Heterozygous",10,34,29.41,1,6,4,0.4,38.93,10,35,6,9,2.7,0.74,0.86,"no","complex","No",1,200,"XP_015840002.1:c.192_193insCCA","XP_015840002.1:p.Pro64_Ser65insPro","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1940,"NW_015450712.1",11572,"SNV","G","T","Heterozygous",19,33,57.58,1,8,12,0.4,38.58,20,34,9,14,1.71,0.8,1,"no","G/T","No",1,99.95,"XP_015840002.1:c.191C>A","XP_015840002.1:p.Pro64Gln","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1941,"NW_015450712.1",11599,"SNV","G","A","Heterozygous",14,28,50,1,7,8,0.47,36.14,15,29,6,9,-2.16,0.83,0.96,"no","A/G","No",1,110.74,"XP_015840002.1:c.164C>T","XP_015840002.1:p.Thr55Ile","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1942,"NW_015450712.1",11659,"SNV","T","A","Heterozygous",13,24,54.17,1,3,10,0.23,36.15,13,24,5,7,0.29,0.76,1,"no","A/T","No",1,86.23,"XP_015840002.1:c.104A>T","XP_015840002.1:p.Gln35Leu","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1943,"NW_015450712.1",11704,"SNV","T","A","Heterozygous",13,30,43.33,1,1,12,0.08,40.15,13,30,6,6,1.59,0.51,0.5,"no","A/T","No",1,94.85,"XP_015840002.1:c.59A>T","XP_015840002.1:p.Lys20Met","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1944,"NW_015450712.1",11738,"SNV","A","C","Homozygous",32,32,100,1,16,20,0.44,38.75,36,36,16,15,null,1,1,"no","C/C","No",1,113.22,"XP_015840002.1:c.25T>G","XP_015840002.1:p.Leu9Val","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1945,"NW_015450712.1",95297,"SNV","T","C","Heterozygous",13,20,65,1,12,4,0.25,36.08,16,23,10,12,-0.71,1,0.99,"no","C/T","No",1,46.23,"XP_008200093.1:c.560A>G","XP_008200093.1:p.Asp187Gly","LOC658544",658544,null,"658544 [Gene Symbol: LOC658544] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: probable cytochrome P450 6a23] [Gene Type: protein-coding]","LOC658544"]
[1946,"NW_015450720.1",53481,"SNV","T","C","Homozygous",22,22,100,1,2,22,0.08,38.27,24,24,11,10,null,1,1,"no","C/C","No",1,86.13,"XP_015840006.1:c.[1863A>G]; XP_015840007.1:c.[1809A>G]","XP_015840006.1:p.[*621Trp]; XP_015840007.1:p.[*603Trp]","LOC107398935",107398935,null,"107398935 [Gene Symbol: LOC107398935] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398935] [Gene Type: protein-coding]","LOC107398935"]
[1947,"NW_015450873.1",1750,"SNV","A","G","Heterozygous",15,22,68.18,1,10,6,0.38,39.07,16,24,9,11,-1.34,0.96,0.96,"no","A/G","No",1,40.74,"XP_015840030.1:c.214A>G","XP_015840030.1:p.Ser72Gly","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1948,"NW_015450873.1",1784,"SNV","G","C","Heterozygous",14,24,58.33,1,8,8,0.5,40.07,16,27,10,14,2.05,0.88,1,"no","C/G","No",1,73.32,"XP_015840030.1:c.248G>C","XP_015840030.1:p.Gly83Ala","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1949,"NW_015450873.1",1834,"SNV","C","T","Heterozygous",15,27,55.56,1,7,11,0.39,39,18,30,11,12,1.49,0.91,0.98,"no","C/T","No",1,91.75,"XP_015840030.1:c.298C>T","XP_015840030.1:p.Gln100*","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1950,"NW_015450873.1","2029..2030","Deletion","AG","-","Heterozygous",9,20,45,1,5,4,0.44,38.67,9,20,7,8,-1.63,0.77,0.96,"no","complex","No",1,200,"XP_015840030.1:c.493_494delAG","XP_015840030.1:p.Arg165fs","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1951,"NW_015450873.1",2209,"SNV","T","A","Heterozygous",11,21,52.38,1,8,4,0.33,39.55,12,24,8,7,2.57,0.23,0.9,"no","A/T","No",1,81.57,"XP_015840030.1:c.673T>A","XP_015840030.1:p.Tyr225Asn","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1952,"NW_015450873.1",2413,"SNV","C","A","Heterozygous",8,30,26.67,1,2,8,0.2,38.88,10,40,6,6,-0.14,0.18,0.57,"no","A/C","No",1,27.53,"XP_015840030.1:c.877C>A","XP_015840030.1:p.Gln293Lys","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1953,"NW_015450873.1",7092,"SNV","A","T","Heterozygous",14,25,56,1,3,13,0.19,39.86,16,29,10,10,0.38,0.61,0.46,"no","A/T","No",1,83.25,"XP_015840028.1:c.2107T>A","XP_015840028.1:p.Leu703Ile","LOC103315075",103315075,null,"103315075 [Gene Symbol: LOC103315075] [Locus Tag: TcasGA2_TC032978] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315075] [Gene Type: protein-coding]","LOC103315075; TcasGA2_TC032978"]
[1954,"NW_015450873.1",7185,"SNV","C","T","Heterozygous",8,30,26.67,1,4,4,0.5,36.75,8,33,5,6,-1.01,0.46,0.94,"no","C/T","No",1,31.22,"XP_015840028.1:c.2014G>A","XP_015840028.1:p.Asp672Asn","LOC103315075",103315075,null,"103315075 [Gene Symbol: LOC103315075] [Locus Tag: TcasGA2_TC032978] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315075] [Gene Type: protein-coding]","LOC103315075; TcasGA2_TC032978"]
[1955,"NW_015450873.1",7244,"SNV","A","G","Heterozygous",11,24,45.83,1,5,6,0.45,36.91,11,24,7,7,-0.98,0.75,0.98,"no","A/G","No",1,87.18,"XP_015840028.1:c.1955T>C","XP_015840028.1:p.Ile652Thr","LOC103315075",103315075,null,"103315075 [Gene Symbol: LOC103315075] [Locus Tag: TcasGA2_TC032978] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315075] [Gene Type: protein-coding]","LOC103315075; TcasGA2_TC032978"]
[1956,"NW_015450873.1","8692..8693","MNV","TC","CG","Heterozygous",7,21,33.33,1,5,3,0.38,40.5,8,22,6,7,0.99,0.88,0.99,"no","complex","No",1,200,"XP_015840028.1:c.506_507delGAinsCG","XP_015840028.1:p.Arg169Thr","LOC103315075",103315075,null,"103315075 [Gene Symbol: LOC103315075] [Locus Tag: TcasGA2_TC032978] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315075] [Gene Type: protein-coding]","LOC103315075; TcasGA2_TC032978"]
[1957,"NW_015450873.1",8731,"SNV","G","T","Heterozygous",6,24,25,0.99,4,3,0.43,38.17,7,27,5,5,-0.7,0.69,0.79,"no","G/T","No",1,18.95,"XP_015840028.1:c.468C>A","XP_015840028.1:p.Asp156Glu","LOC103315075",103315075,null,"103315075 [Gene Symbol: LOC103315075] [Locus Tag: TcasGA2_TC032978] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315075] [Gene Type: protein-coding]","LOC103315075; TcasGA2_TC032978"]
[1958,"NW_015450887.1",4269,"SNV","C","T","Heterozygous",12,44,27.27,1,7,7,0.5,40.08,14,46,9,10,1.07,0.52,0.9,"no","C/T","No",1,42.9,"XP_015840032.1:c.694G>A","XP_015840032.1:p.Asp232Asn","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1959,"NW_015450887.1",4272,"SNV","T","G","Heterozygous",21,43,48.84,1,13,8,0.38,39.86,21,45,12,16,0.58,0.84,1,"no","G/T","No",1,200,"XP_015840032.1:c.691A>C","XP_015840032.1:p.Lys231Gln","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1960,"NW_015450887.1",4298,"SNV","G","T","Heterozygous",12,46,26.09,1,8,5,0.38,40.83,13,50,10,10,2.65,0.18,1,"no","G/T","No",1,34.11,"XP_015840032.1:c.665C>A","XP_015840032.1:p.Ala222Asp","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1961,"NW_015450887.1",4325,"SNV","G","A","Heterozygous",15,41,36.59,1,10,5,0.33,39.13,15,46,10,11,0.62,0.22,0.99,"no","A/G","No",1,89.54,"XP_015840032.1:c.638C>T","XP_015840032.1:p.Pro213Leu","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1962,"NW_015450887.1","4399..4400","MNV","GG","AA","Heterozygous",12,52,23.08,1,5,7,0.42,39.92,12,60,8,10,0.46,0.37,0.92,"no","complex","No",1,200,"XP_015840032.1:c.563_564delCCinsTT","XP_015840032.1:p.Thr188Ile","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1963,"NW_015450887.1",4584,"SNV","T","G","Heterozygous",19,67,28.36,1,10,12,0.45,38.95,22,76,15,13,-0.01,0.42,0.99,"no","G/T","No",1,69.21,"XP_015840032.1:c.379A>C","XP_015840032.1:p.Lys127Gln","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1964,"NW_015450887.1",4643,"SNV","C","T","Heterozygous",14,53,26.42,1,6,9,0.4,39.86,15,60,9,10,1.91,0.7,0.99,"no","C/T","No",1,43.24,"XP_015840032.1:c.320G>A","XP_015840032.1:p.Arg107Lys","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1965,"NW_015450887.1",4880,"SNV","G","A","Heterozygous",7,30,23.33,0.99,5,5,0.5,39.29,10,38,6,5,0.71,0.66,1,"no","A/G","No",1,18.59,"XP_015840032.1:c.83C>T","XP_015840032.1:p.Thr28Ile","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1966,"NW_015450887.1",4931,"Deletion","T","-","Homozygous",24,28,85.71,0.96,16,9,0.36,38.04,25,29,16,19,null,0.93,1,"no","-/-","No",1,14.12,"XP_015840032.1:c.32delA","XP_015840032.1:p.Asn11fs","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1967,"NW_015450890.1",112355,"SNV","T","G","Heterozygous",5,21,23.81,0.99,3,5,0.38,39.4,8,24,4,5,1.28,0.16,1,"no","G/T","No",1,18.55,"XP_008197923.1:c.[554A>C]; XP_015840038.1:c.[554A>C]","XP_008197923.1:p.[Glu185Ala]; XP_015840038.1:p.[Glu185Ala]","LOC103314243",103314243,null,"103314243 [Gene Symbol: LOC103314243] [Locus Tag: TcasGA2_TC031714] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314243] [Gene Type: protein-coding]","LOC103314243; TcasGA2_TC031714"]
[1968,"NW_015450890.1",112858,"SNV","C","A","Heterozygous",7,25,28,1,4,4,0.5,36.71,8,26,4,4,-2.33,0.19,0.98,"no","A/C","No",1,28.72,"XP_015840038.1:c.[106G>T]; XP_008197923.1:c.[106G>T]","XP_015840038.1:p.[Gly36Cys]; XP_008197923.1:p.[Gly36Cys]","LOC103314243",103314243,null,"103314243 [Gene Symbol: LOC103314243] [Locus Tag: TcasGA2_TC031714] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314243] [Gene Type: protein-coding]","LOC103314243; TcasGA2_TC031714"]
[1969,"NW_015450890.1",112887,"SNV","G","A","Heterozygous",8,32,25,1,5,3,0.38,38.12,8,33,5,4,-0.17,0.84,1,"no","A/G","No",1,25.65,"XP_008197923.1:c.[77C>T]; XP_015840038.1:c.[77C>T]","XP_008197923.1:p.[Ala26Val]; XP_015840038.1:p.[Ala26Val]","LOC103314243",103314243,null,"103314243 [Gene Symbol: LOC103314243] [Locus Tag: TcasGA2_TC031714] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314243] [Gene Type: protein-coding]","LOC103314243; TcasGA2_TC031714"]
[1970,"NW_015450890.1",112933,"SNV","C","T","Heterozygous",7,20,35,1,4,5,0.44,38.43,9,24,4,4,0.44,0.72,0.89,"no","C/T","No",1,49.05,"XP_015840038.1:c.[31G>A]; XP_008197923.1:c.[31G>A]","XP_015840038.1:p.[Gly11Arg]; XP_008197923.1:p.[Gly11Arg]","LOC103314243",103314243,null,"103314243 [Gene Symbol: LOC103314243] [Locus Tag: TcasGA2_TC031714] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314243] [Gene Type: protein-coding]","LOC103314243; TcasGA2_TC031714"]
[1971,"NW_015450890.1",116452,"SNV","C","G","Heterozygous",12,38,31.58,1,1,11,0.08,39.08,12,41,4,5,0.08,0.36,0.22,"no","C/G","No",1,59.88,"XP_008197926.1:c.1196G>C","XP_008197926.1:p.Ser399Thr","LOC103314246",103314246,null,"103314246 [Gene Symbol: LOC103314246] [Locus Tag: TcasGA2_TC031715] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey] [Gene Type: protein-coding]","LOC103314246; TcasGA2_TC031715"]
[1972,"NW_015450917.1","20451..20452","MNV","TG","CA","Heterozygous",8,23,34.78,1,8,2,0.2,38.31,10,25,5,6,null,0.17,0.34,"no","complex","No",1,200,"XP_008200678.2:c.1614_1615delTGinsCA","XP_008200678.2:p.Glu539Lys","LOC657155",657155,null,"657155 [Gene Symbol: LOC657155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: polycomb group protein Psc] [Gene Type: protein-coding]","LOC657155"]
[1973,"NW_015450917.1",20536,"SNV","A","G","Heterozygous",16,35,45.71,1,13,5,0.28,37.06,18,40,9,9,1.67,0.34,0.46,"no","A/G","No",1,110.33,"XP_008200678.2:c.1699A>G","XP_008200678.2:p.Thr567Ala","LOC657155",657155,null,"657155 [Gene Symbol: LOC657155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: polycomb group protein Psc] [Gene Type: protein-coding]","LOC657155"]
[1974,"NW_015450917.1",20951,"SNV","T","C","Heterozygous",11,20,55,1,6,6,0.5,38.27,12,25,7,8,3,0.18,1,"no","C/T","No",1,71.7,"XP_008200678.2:c.2114T>C","XP_008200678.2:p.Leu705Pro","LOC657155",657155,null,"657155 [Gene Symbol: LOC657155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: polycomb group protein Psc] [Gene Type: protein-coding]","LOC657155"]
[1975,"NW_015450917.1",21262,"SNV","G","A","Heterozygous",15,26,57.69,1,0,15,0,37.27,15,26,6,7,0.8,0.2,0.19,"no","A/G","No",1,81.61,"XP_008200678.2:c.2425G>A","XP_008200678.2:p.Glu809Lys","LOC657155",657155,null,"657155 [Gene Symbol: LOC657155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: polycomb group protein Psc] [Gene Type: protein-coding]","LOC657155"]
[1976,"NW_015450940.1",4010,"SNV","A","T","Heterozygous",6,23,26.09,1,6,0,0,40.83,6,23,4,4,1.82,0.32,1,"no","A/T","No",1,25.16,"XP_015840045.1:c.428A>T","XP_015840045.1:p.Lys143Met","LOC107398970",107398970,null,"107398970 [Gene Symbol: LOC107398970] [Locus Tag: TcasGA2_TC010304] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398970] [Gene Type: protein-coding]","TcasGA2_TC010304; LOC107398970"]
[1977,"NW_015450959.1",12059,"SNV","T","C","Heterozygous",9,28,32.14,1,9,0,0,38.44,9,28,5,7,0.93,0.69,1,"no","C/T","No",1,50.65,"XP_008199420.1:c.47A>G","XP_008199420.1:p.Tyr16Cys","LOC103314659",103314659,null,"103314659 [Gene Symbol: LOC103314659] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: protein spaetzle-like] [Gene Type: protein-coding]","LOC103314659"]
[1978,"NW_015450959.1",13219,"SNV","T","C","Heterozygous",22,32,68.75,1,1,21,0.05,40,22,36,12,12,3.52,0.17,0.22,"no","C/T","No",1,51.11,"XP_015840048.1:c.53A>G","XP_015840048.1:p.Asp18Gly","LOC103314665",103314665,null,"103314665 [Gene Symbol: LOC103314665] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: protein spaetzle-like] [Gene Type: protein-coding]","LOC103314665"]
[1979,"NW_015450974.1","11644..11646","Deletion","GGC","-","Homozygous",22,22,100,1,2,20,0.09,33.36,22,22,8,11,null,1,1,"no","-/-","No",1,200,"XP_015840054.1:c.[2602_2604delGCC]; XP_008195529.1:c.[2593_2595delGCC]","XP_015840054.1:p.[Ala868del]; XP_008195529.1:p.[Ala865del]","LOC659750",659750,null,"659750 [Gene Symbol: LOC659750] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: nervous wreck-like] [Gene Type: protein-coding]","LOC659750; nwk"]
[1980,"NW_015450989.1",103583,"SNV","T","G","Homozygous",21,21,100,1,3,20,0.13,36.62,23,23,10,13,null,1,1,"no","G/G","No",1,83.1,"XP_015840072.1:c.[3555A>C]; XP_015840073.1:c.[3555A>C]; XP_015840074.1:c.[3525A>C]","XP_015840072.1:p.[Gln1185His]; XP_015840073.1:p.[Gln1185His]; XP_015840074.1:p.[Gln1175His]","LOC103315105",103315105,null,"103315105 [Gene Symbol: LOC103315105] [Locus Tag: TcasGA2_TC031745] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315105] [Gene Type: protein-coding]","LOC103315105; TcasGA2_TC031745"]
[1981,"NW_015450989.1",109010,"SNV","C","A","Homozygous",22,22,100,1,12,11,0.48,39.36,23,23,14,13,null,1,1,"no","A/A","No",1,87.7,"XP_015840072.1:c.[1951G>T]; XP_015840073.1:c.[1951G>T]; XP_015840074.1:c.[1921G>T]","XP_015840072.1:p.[Val651Leu]; XP_015840073.1:p.[Val651Leu]; XP_015840074.1:p.[Val641Leu]","LOC103315105",103315105,null,"103315105 [Gene Symbol: LOC103315105] [Locus Tag: TcasGA2_TC031745] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315105] [Gene Type: protein-coding]","LOC103315105; TcasGA2_TC031745"]
[1982,"NW_015451049.1",112999,"SNV","C","A","Homozygous",42,49,85.71,1,28,22,0.44,36.57,50,58,27,27,null,1,1,"no","A/A","No",1,33.81,"XP_015840124.1:c.240G>T","XP_015840124.1:p.Gln80His","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1983,"NW_015451049.1",113009,"SNV","T","C","Homozygous",47,55,85.45,1,28,27,0.49,36.89,55,64,30,30,null,1,1,"no","C/C","No",1,38.51,"XP_015840124.1:c.230A>G","XP_015840124.1:p.Lys77Arg","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1984,"NW_015451049.1",113160,"SNV","C","T","Homozygous",45,53,84.91,1,9,42,0.18,36.93,51,63,19,26,null,0.79,0.73,"no","T/T","No",1,31.72,"XP_015840124.1:c.79G>A","XP_015840124.1:p.Ala27Thr","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1985,"NW_015451049.1",113163,"SNV","C","A","Homozygous",43,51,84.31,1,13,40,0.25,37.09,53,65,17,24,null,0.75,0.88,"no","A/A","No",1,26.61,"XP_015840124.1:c.76G>T","XP_015840124.1:p.Ala26Ser","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1986,"NW_015451146.1",4025,"SNV","C","G","Heterozygous",20,64,31.25,1,17,8,0.32,37.9,25,73,12,12,0.21,0.93,1,"no","C/G","No",1,97.58,"XP_008192463.1:c.1798G>C","XP_008192463.1:p.Gly600Arg","LOC103312772",103312772,null,"103312772 [Gene Symbol: LOC103312772] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312772] [Gene Type: protein-coding]","LOC103312772"]
[1987,"NW_015451146.1",4202,"SNV","C","T","Heterozygous",11,34,32.35,1,0,11,0,38.27,11,34,5,9,1.99,0.36,1,"no","C/T","No",1,58.14,"XP_008192463.1:c.1621G>A","XP_008192463.1:p.Gly541Ser","LOC103312772",103312772,null,"103312772 [Gene Symbol: LOC103312772] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312772] [Gene Type: protein-coding]","LOC103312772"]
[1988,"NW_015451146.1",5226,"SNV","C","G","Heterozygous",5,23,21.74,0.94,0,5,0,37.2,5,23,2,2,0.22,0.84,0.83,"no","C/G","No",1,12.52,"XP_008192463.1:c.597G>C","XP_008192463.1:p.Gln199His","LOC103312772",103312772,null,"103312772 [Gene Symbol: LOC103312772] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312772] [Gene Type: protein-coding]","LOC103312772"]
[1989,"NW_015451146.1",11234,"SNV","C","T","Heterozygous",5,24,20.83,1,0,5,0,39.6,5,24,2,4,0.85,0.07,0.05,"no","complex","No",1,93.71,"XP_015840145.1:c.598G>A","XP_015840145.1:p.Asp200Asn","LOC107399018",107399018,null,"107399018 [Gene Symbol: LOC107399018] [Locus Tag: TcasGA2_TC031710] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399018] [Gene Type: protein-coding]","TcasGA2_TC031710; LOC107399018"]
[1990,"NW_015451146.1",11235,"SNV","C","G","Heterozygous",7,27,25.93,1,7,0,0,38.86,7,27,4,5,0.86,0.55,0.18,"no","complex","No",1,200,"XP_015840145.1:c.597G>C","XP_015840145.1:p.Gln199His","LOC107399018",107399018,null,"107399018 [Gene Symbol: LOC107399018] [Locus Tag: TcasGA2_TC031710] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399018] [Gene Type: protein-coding]","TcasGA2_TC031710; LOC107399018"]
[1991,"NW_015451146.1",13252,"SNV","T","C","Homozygous",49,49,100,1,30,24,0.44,39.1,54,54,33,37,null,1,1,"no","C/C","No",1,200,"XP_008192464.1:c.1261A>G","XP_008192464.1:p.Lys421Glu","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1992,"NW_015451146.1",13411,"SNV","C","A","Heterozygous",11,40,27.5,1,9,4,0.31,38,13,43,6,6,-0.56,0.8,0.84,"no","A/C","No",1,37.94,"XP_008192464.1:c.1102G>T","XP_008192464.1:p.Val368Phe","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1993,"NW_015451146.1",13489,"SNV","G","A","Heterozygous",14,41,34.15,1,4,11,0.27,38.43,15,45,9,9,-0.45,0.49,0.81,"no","A/G","No",1,76.96,"XP_008192464.1:c.1024C>T","XP_008192464.1:p.Leu342Phe","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1994,"NW_015451146.1",13950,"SNV","C","T","Homozygous",46,46,100,1,23,27,0.46,39.28,50,50,28,27,null,1,1,"no","T/T","No",1,159.55,"XP_008192464.1:c.563G>A","XP_008192464.1:p.Arg188Lys","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1995,"NW_015451146.1",14023,"SNV","C","T","Heterozygous",11,39,28.21,1,7,7,0.5,39,14,44,6,8,0.95,0.69,0.94,"no","C/T","No",1,34.25,"XP_008192464.1:c.490G>A","XP_008192464.1:p.Gly164Arg","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1996,"NW_015451146.1",14065,"SNV","C","A","Heterozygous",8,25,32,1,4,4,0.5,37.62,8,28,6,7,0.35,0.52,1,"no","A/C","No",1,41.43,"XP_008192464.1:c.448G>T","XP_008192464.1:p.Glu150*","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1997,"NW_015451234.1",12258,"SNV","G","A","Heterozygous",17,26,65.38,1,11,12,0.48,37.35,23,32,11,12,0.03,0.86,0.92,"no","A/G","No",1,56.06,"XP_008201045.1:c.968C>T","XP_008201045.1:p.Thr323Ile","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1998,"NW_015451264.1",9518,"Deletion","A","-","Heterozygous",12,26,46.15,1,8,4,0.33,37.17,12,28,8,4,-0.67,0.12,0.55,"no","-/A","Yes",10,92.42,"XP_015840154.1:c.475delA","XP_015840154.1:p.Ile162fs","LOC107399024",107399024,null,"107399024 [Gene Symbol: LOC107399024] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399024] [Gene Type: protein-coding]","LOC107399024"]
[1999,"NW_015451351.1",4947,"SNV","C","T","Heterozygous",5,20,25,0.99,3,4,0.43,38.6,7,28,4,4,0.31,0.24,0.99,"no","C/T","No",1,20.78,"XP_015840159.1:c.1241G>A","XP_015840159.1:p.Cys414Tyr","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2000,"NW_015451351.1",4994,"SNV","A","T","Heterozygous",10,32,31.25,1,8,3,0.27,39.1,11,40,6,7,1.36,0.59,0.65,"no","A/T","No",1,51.12,"XP_015840159.1:c.1194T>A","XP_015840159.1:p.Ser398Arg","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2001,"NW_015451351.1",4996,"SNV","T","C","Heterozygous",9,34,26.47,1,7,3,0.3,39.33,10,40,5,6,0.96,0.25,0.93,"no","C/T","No",1,33.98,"XP_015840159.1:c.1192A>G","XP_015840159.1:p.Ser398Gly","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2002,"NW_015451351.1",5161,"SNV","T","C","Heterozygous",15,26,57.69,1,8,14,0.36,36.47,22,35,9,8,-1.19,0.89,1,"no","C/T","No",1,80.4,"XP_015840159.1:c.1027A>G","XP_015840159.1:p.Asn343Asp","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2003,"NW_015451351.1",5182,"SNV","T","A","Heterozygous",13,29,44.83,1,7,7,0.5,37.62,14,36,9,8,-1.12,0.6,1,"no","A/T","No",1,97.68,"XP_015840159.1:c.1006A>T","XP_015840159.1:p.Thr336Ser","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2004,"NW_015451351.1",5350,"SNV","G","A","Homozygous",22,22,100,1,20,4,0.17,38.27,24,24,17,18,null,1,1,"no","A/A","No",1,87.71,"XP_015840159.1:c.838C>T","XP_015840159.1:p.Arg280Trp","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2005,"NW_015451351.1",5531,"SNV","T","A","Heterozygous",6,27,22.22,0.96,6,0,0,40.33,6,30,4,5,1.81,0.09,0.09,"no","A/T","No",1,14.05,"XP_015840159.1:c.657A>T","XP_015840159.1:p.Lys219Asn","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2006,"NW_015451351.1",5543,"SNV","T","A","Heterozygous",25,32,78.12,0.95,15,13,0.46,38.24,28,37,19,21,-0.36,0.96,1,"no","A/T","No",1,13.04,"XP_015840159.1:c.645A>T","XP_015840159.1:p.Lys215Asn","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2007,"NW_015451351.1",5635,"SNV","T","C","Heterozygous",17,31,54.84,1,11,11,0.5,39.06,22,39,12,12,0.04,0.54,0.95,"no","C/T","No",1,104.7,"XP_015840159.1:c.553A>G","XP_015840159.1:p.Lys185Glu","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2008,"NW_015451351.1",5638,"SNV","T","C","Heterozygous",10,30,33.33,1,8,4,0.33,38.8,12,37,10,9,0.11,0.75,0.98,"no","C/T","No",1,57.9,"XP_015840159.1:c.550A>G","XP_015840159.1:p.Ile184Val","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2009,"NW_015451351.1",5644,"SNV","T","C","Heterozygous",8,29,27.59,1,6,3,0.33,38.88,9,40,8,7,1.07,0.62,0.86,"no","C/T","No",1,35.16,"XP_015840159.1:c.544A>G","XP_015840159.1:p.Lys182Glu","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2010,"NW_015451351.1",5646,"SNV","T","G","Heterozygous",8,33,24.24,1,8,6,0.43,36.25,14,44,8,7,-1.49,0.44,1,"no","G/T","No",1,23.4,"XP_015840159.1:c.542A>C","XP_015840159.1:p.Asp181Ala","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2011,"NW_015451351.1",5661,"SNV","G","T","Heterozygous",11,31,35.48,1,9,3,0.25,40.09,12,41,9,11,3.1,0.21,0.58,"no","G/T","No",1,63.16,"XP_015840159.1:c.527C>A","XP_015840159.1:p.Thr176Lys","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2012,"NW_015451351.1",5673,"SNV","T","A","Heterozygous",6,24,25,0.99,6,0,0,41,6,29,4,6,3.2,0.06,0.11,"no","A/T","No",1,22.25,"XP_015840159.1:c.515A>T","XP_015840159.1:p.Glu172Val","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2013,"NW_015451351.1",5676,"SNV","T","C","Heterozygous",7,24,29.17,1,6,1,0.14,40.43,7,29,5,7,3.11,0.22,0.29,"no","complex","No",1,200,"XP_015840159.1:c.512A>G","XP_015840159.1:p.Asp171Gly","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2014,"NW_015451351.1",5677,"SNV","C","T","Heterozygous",8,25,32,1,4,6,0.4,36.38,10,30,8,7,-0.73,0.95,0.93,"no","complex","No",1,200,"XP_015840159.1:c.511G>A","XP_015840159.1:p.Asp171Asn","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2015,"NW_015451351.1",5713,"SNV","T","C","Heterozygous",20,31,64.52,1,9,15,0.38,36.8,24,35,16,16,-1.71,0.97,0.98,"no","C/T","No",1,66.45,"XP_015840159.1:c.475A>G","XP_015840159.1:p.Lys159Glu","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2016,"NW_015451351.1",5744,"SNV","A","T","Heterozygous",18,30,60,1,4,15,0.21,37.78,19,32,14,13,0,0.43,0.95,"no","A/T","No",1,82.08,"XP_015840159.1:c.444T>A","XP_015840159.1:p.Ser148Arg","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2017,"NW_015451351.1",5749,"SNV","G","A","Heterozygous",19,32,59.38,1,4,17,0.19,38.21,21,37,14,13,-0.04,0.53,0.91,"no","A/G","No",1,90.43,"XP_015840159.1:c.439C>T","XP_015840159.1:p.His147Tyr","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2018,"NW_015451351.1",5784,"SNV","A","G","Heterozygous",15,27,55.56,1,4,12,0.25,39.4,16,31,11,12,1.24,0.41,0.9,"no","A/G","No",1,90.42,"XP_015840159.1:c.404T>C","XP_015840159.1:p.Val135Ala","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2019,"NW_015451351.1",5808,"SNV","G","T","Heterozygous",7,22,31.82,1,4,5,0.44,38,9,25,5,5,-0.85,0.18,0.97,"no","G/T","No",1,37.22,"XP_015840159.1:c.380C>A","XP_015840159.1:p.Thr127Lys","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2020,"NW_015451351.1","5820..5821","MNV","CA","TC","Heterozygous",7,20,35,1,4,5,0.44,38.79,9,23,7,6,0.06,0.14,1,"no","complex","No",1,200,"XP_015840159.1:c.367_368delTGinsGA","XP_015840159.1:p.Cys123Asp","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2021,"NW_015451351.1",6159,"SNV","T","G","Heterozygous",5,21,23.81,0.99,4,2,0.33,36.6,6,23,4,5,-1.69,0.66,0.82,"no","G/T","No",1,18.55,"XP_015840159.1:c.29A>C","XP_015840159.1:p.Lys10Thr","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2022,"NW_015451351.1",6167,"SNV","T","A","Heterozygous",7,21,33.33,1,5,4,0.44,38.71,9,23,6,6,0.63,0.45,1,"no","A/T","No",1,43.36,"XP_015840159.1:c.21A>T","XP_015840159.1:p.Lys7Asn","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2023,"NW_015451432.1",144772,"SNV","G","C","Heterozygous",17,28,60.71,1,9,8,0.47,38.06,17,29,14,15,0.68,0.87,1,"no","C/G","No",1,74.84,"XP_015840165.1:c.91G>C","XP_015840165.1:p.Glu31Gln","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2024,"NW_015451432.1",145007,"SNV","A","T","Heterozygous",10,21,47.62,1,5,5,0.5,37.5,10,21,6,5,-1.62,0.77,1,"no","A/T","No",1,81.56,"XP_015840165.1:c.326A>T","XP_015840165.1:p.Lys109Ile","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2025,"NW_015451432.1",145201,"SNV","T","G","Heterozygous",8,20,40,1,5,3,0.38,37.62,8,23,6,8,-0.54,0.74,1,"no","G/T","No",1,59.59,"XP_015840165.1:c.520T>G","XP_015840165.1:p.Tyr174Asp","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2026,"NW_015451432.1",145370,"SNV","G","C","Heterozygous",15,32,46.88,1,7,11,0.39,38.8,18,36,11,12,0.26,0.65,0.99,"no","C/G","No",1,114.84,"XP_015840165.1:c.689G>C","XP_015840165.1:p.Arg230Pro","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2027,"NW_015451432.1",145399,"SNV","A","G","Heterozygous",13,38,34.21,1,7,9,0.44,38.31,16,41,10,12,-1.09,0.95,1,"no","A/G","No",1,73.72,"XP_015840165.1:c.718A>G","XP_015840165.1:p.Lys240Glu","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2028,"NW_015451432.1",145502,"SNV","T","A","Heterozygous",18,28,64.29,1,12,8,0.4,38.89,20,30,14,13,0.67,0.81,1,"no","A/T","No",1,62.27,"XP_015840165.1:c.821T>A","XP_015840165.1:p.Phe274Tyr","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2029,"NW_015451432.1",146543,"SNV","T","G","Heterozygous",13,27,48.15,1,5,10,0.33,39.38,15,33,6,8,-0.05,0.87,0.89,"no","G/T","No",1,103.42,"XP_015840166.1:c.178T>G","XP_015840166.1:p.Leu60Val","LOC103313249",103313249,null,"103313249 [Gene Symbol: LOC103313249] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103313249] [Gene Type: protein-coding]","LOC103313249"]
[2030,"NW_015451432.1",146700,"SNV","G","A","Heterozygous",6,22,27.27,1,1,5,0.17,40.17,6,23,3,3,-0.92,0.27,0.16,"no","A/G","No",1,28.06,"XP_015840166.1:c.277G>A","XP_015840166.1:p.Asp93Asn","LOC103313249",103313249,null,"103313249 [Gene Symbol: LOC103313249] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103313249] [Gene Type: protein-coding]","LOC103313249"]
[2031,"NW_015451444.1",54159,"SNV","T","C","Homozygous",18,20,90,0.99,15,4,0.21,38.06,19,21,10,13,null,0.98,1,"no","C/C","No",1,22.18,"XP_015840167.1:c.4834A>G","XP_015840167.1:p.Lys1612Glu","LOC659349",659349,null,"659349 [Gene Symbol: LOC659349] [Locus Tag: TcasGA2_TC004260] [Chromosome: Un] [Map Location: ] [Description: low-density lipoprotein receptor-related protein 2] [Gene Type: protein-coding]","TcasGA2_TC004260; LOC659349"]
[2032,"NW_015451448.1",42630,"SNV","A","G","Heterozygous",6,21,28.57,1,0,6,0,39.83,6,24,2,2,2.41,0.16,0.22,"no","A/G","No",1,34.54,"XP_008190994.1:c.[58A>G]; XP_015840171.1:c.[590-5927A>G]; XP_008191019.1:c.[398-5927A>G]; XP_008190998.2:c.[350-5927A>G]; XP_008190990.2:c.[350-5927A>G]; XP_008191006.1:c.[418+5488A>G]; XP_008191011.1:c.[416-5927A>G]","XP_008190994.1:p.Thr20Ala","LOC655232",655232,null,"655232 [Gene Symbol: LOC655232] [Locus Tag: TcasGA2_TC030964] [Chromosome: Un] [Map Location: ] [Description: G-protein coupled receptor Mth2] [Gene Type: protein-coding]","TcasGA2_TC030964; LOC655232"]
[2033,"NW_015451489.1",33715,"SNV","C","T","Heterozygous",12,20,60,1,1,12,0.08,37.67,13,23,3,3,-0.12,0.42,0.93,"no","C/T","No",1,60.2,"XP_008192735.1:c.476C>T","XP_008192735.1:p.Ala159Val","LOC103312837",103312837,null,"103312837 [Gene Symbol: LOC103312837] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312837] [Gene Type: protein-coding]","LOC103312837"]
[2034,"NW_015451514.1","1887..1894","Deletion","TTTTTCAA","-","Heterozygous",38,61,62.3,1,13,29,0.31,37.34,42,66,24,26,0.13,0.97,0.97,"no","complex","No",1,200,"XP_015840230.1:c.[844_851delTTGAAAAA]; XP_015840231.1:c.[790_797delTTGAAAAA]","XP_015840230.1:p.[Leu282fs]; XP_015840231.1:p.[Leu264fs]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2035,"NW_015451514.1",2045,"SNV","A","C","Heterozygous",29,46,63.04,1,16,17,0.48,37.41,33,53,21,22,1.58,0.73,1,"no","A/C","No",1,97.85,"XP_015840230.1:c.[693T>G]; XP_015840231.1:c.[639T>G]","XP_015840230.1:p.[Phe231Leu]; XP_015840231.1:p.[Phe213Leu]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2036,"NW_015451514.1",2070,"SNV","G","C","Heterozygous",24,38,63.16,1,12,14,0.46,36.75,26,44,19,18,0.15,0.96,1,"no","C/G","No",1,85.42,"XP_015840230.1:c.[668C>G]; XP_015840231.1:c.[614C>G]","XP_015840230.1:p.[Ser223Cys]; XP_015840231.1:p.[Ser205Cys]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2037,"NW_015451514.1",2290,"SNV","T","G","Heterozygous",14,31,45.16,1,7,7,0.5,37.29,14,32,8,8,-0.65,0.31,0.99,"no","G/T","No",1,105.63,"XP_015840231.1:c.[394A>C]; XP_015840230.1:c.[448A>C]","XP_015840231.1:p.[Thr132Pro]; XP_015840230.1:p.[Thr150Pro]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2038,"NW_015451514.1",2992,"SNV","A","G","Heterozygous",6,27,22.22,0.97,4,4,0.5,36.5,8,35,5,5,-0.03,0.36,0.95,"no","A/G","No",1,15.15,"XP_015840230.1:c.[113T>C]; XP_015840231.1:c.[113T>C]","XP_015840230.1:p.[Leu38Ser]; XP_015840231.1:p.[Leu38Ser]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2039,"NW_015451514.1",3004,"SNV","A","C","Heterozygous",8,36,22.22,0.97,5,5,0.5,37.62,10,41,7,7,0.59,0.86,1,"no","A/C","No",1,15.32,"XP_015840230.1:c.[101T>G]; XP_015840231.1:c.[101T>G]","XP_015840230.1:p.[Leu34Arg]; XP_015840231.1:p.[Leu34Arg]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2040,"NW_015451514.1",3056,"SNV","G","T","Heterozygous",29,56,51.79,1,15,17,0.47,38.28,32,69,16,19,2.57,0.26,0.99,"no","G/T","No",1,200,"XP_015840230.1:c.[49C>A]; XP_015840231.1:c.[49C>A]","XP_015840230.1:p.[Arg17Ser]; XP_015840231.1:p.[Arg17Ser]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2041,"NW_015451575.1",736,"SNV","T","G","Homozygous",20,20,100,1,9,13,0.41,37.15,22,22,11,11,null,1,1,"no","G/G","No",1,80.09,"XP_015840239.1:c.98T>G","XP_015840239.1:p.Ile33Arg","LOC103313046",103313046,null,"103313046 [Gene Symbol: LOC103313046] [Locus Tag: TcasGA2_TC035008] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103313046] [Gene Type: protein-coding]","LOC103313046; TcasGA2_TC035008"]
[2042,"NW_015451597.1",5317,"Deletion","A","-","Homozygous",24,24,100,1,14,12,0.46,38.04,26,26,18,20,null,1,1,"no","-/-","No",1,102.75,"XP_015840241.1:c.1207delA","XP_015840241.1:p.Asn404fs","LOC107399075",107399075,null,"107399075 [Gene Symbol: LOC107399075] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399075] [Gene Type: protein-coding]","LOC107399075"]
[2043,"NW_015451657.1",28095,"SNV","T","A","Homozygous",24,24,100,1,16,10,0.38,38.17,26,26,11,17,null,1,1,"no","A/A","No",1,93.72,"XP_015840258.1:c.584T>A","XP_015840258.1:p.Ile195Asn","LOC107399091",107399091,null,"107399091 [Gene Symbol: LOC107399091] [Locus Tag: TcasGA2_TC033284] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399091] [Gene Type: protein-coding]","LOC107399091; TcasGA2_TC033284"]
[2044,"NW_015451657.1",28273,"Deletion","A","-","Heterozygous",5,22,22.73,0.96,4,2,0.33,37.6,6,24,3,4,-1.06,0.05,0.14,"no","-/A","Yes",8,14.3,"XP_015840258.1:c.762delA","XP_015840258.1:p.Arg257fs","LOC107399091",107399091,null,"107399091 [Gene Symbol: LOC107399091] [Locus Tag: TcasGA2_TC033284] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399091] [Gene Type: protein-coding]","LOC107399091; TcasGA2_TC033284"]
[2045,"NW_015451687.1",88244,"SNV","C","T","Heterozygous",39,50,78,0.97,30,12,0.29,36.23,42,55,23,25,-3.04,0.85,0.99,"no","C/T","No",1,15.07,"XP_008197805.1:c.[1643+22406C>T]; XP_015840269.1:c.[295G>A]; XP_015840265.1:c.[2114+22406C>T]; XP_008197770.1:c.[2114+22406C>T]","XP_015840269.1:p.Gly99Arg","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[2046,"NW_015451687.1",88352,"SNV","T","C","Heterozygous",53,68,77.94,0.96,30,35,0.46,37.4,65,82,23,23,1.24,0.99,1,"no","C/T","No",1,14.43,"XP_015840269.1:c.[225+36A>G]; XP_008197805.1:c.[1643+22514T>C]; XP_015840270.1:c.[202A>G]; XP_015840265.1:c.[2114+22514T>C]; XP_008197770.1:c.[2114+22514T>C]","XP_015840270.1:p.Thr68Ala","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[2047,"NW_015451687.1",88390,"SNV","T","C","Homozygous",41,46,89.13,1,14,30,0.32,36.78,44,49,21,20,null,0.99,0.99,"no","C/C","No",1,51.66,"XP_015840269.1:c.[223A>G]; XP_015840265.1:c.[2114+22552T>C]; XP_008197805.1:c.[1643+22552T>C]; XP_008197770.1:c.[2114+22552T>C]; XP_015840270.1:c.[164A>G]","XP_015840269.1:p.[Ile75Val]; XP_015840270.1:p.[Asn55Ser]","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[2048,"NW_015451687.1",88411,"SNV","C","G","Homozygous",31,38,81.58,0.72,5,26,0.16,39.1,31,38,15,15,0.58,0.93,0.96,"no","G/G","No",1,5.49,"XP_015840270.1:c.[143G>C]; XP_015840265.1:c.[2114+22573C>G]; XP_015840269.1:c.[202G>C]; XP_008197770.1:c.[2114+22573C>G]; XP_008197805.1:c.[1643+22573C>G]","XP_015840270.1:p.[Arg48Thr]; XP_015840269.1:p.[Glu68Gln]","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[2049,"NW_015451687.1",88420,"SNV","C","A","Homozygous",31,38,81.58,0.67,7,25,0.22,39.06,32,39,13,14,1.22,0.98,0.99,"no","A/A","No",1,4.87,"XP_008197805.1:c.[1643+22582C>A]; XP_008197770.1:c.[2114+22582C>A]; XP_015840265.1:c.[2114+22582C>A]; XP_015840270.1:c.[134G>T]; XP_015840269.1:c.[193G>T]","XP_015840270.1:p.[Cys45Phe]; XP_015840269.1:p.[Val65Phe]","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[2050,"NW_015451687.1",256412,"SNV","A","G","Heterozygous",43,59,72.88,1,29,19,0.4,37.7,48,67,25,25,0.09,0.93,1,"no","A/G","No",1,52.22,"XP_008198284.1:c.[757T>C]; XP_008198234.1:c.[757T>C]","XP_008198284.1:p.[*253Arg]; XP_008198234.1:p.[*253Arg]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2051,"NW_015451687.1",256463,"SNV","A","G","Homozygous",54,63,85.71,1,33,24,0.42,36.89,57,67,33,35,null,1,1,"no","G/G","No",1,47.98,"XP_008198234.1:c.[706T>C]; XP_008198284.1:c.[706T>C]","XP_008198234.1:p.[Tyr236His]; XP_008198284.1:p.[Tyr236His]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2052,"NW_015451687.1",256716,"SNV","G","A","Homozygous",52,52,100,1,14,46,0.23,38.29,60,60,30,29,null,1,1,"no","A/A","No",1,159.55,"XP_008198234.1:c.[500C>T]; XP_008198284.1:c.[500C>T]","XP_008198234.1:p.[Thr167Ile]; XP_008198284.1:p.[Thr167Ile]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2053,"NW_015451687.1",256733,"SNV","G","C","Homozygous",57,57,100,1,28,38,0.42,37.68,66,66,36,36,null,1,1,"no","C/C","No",1,200,"XP_008198234.1:c.[483C>G]; XP_008198284.1:c.[483C>G]","XP_008198234.1:p.[Asp161Glu]; XP_008198284.1:p.[Asp161Glu]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2054,"NW_015451687.1",256899,"SNV","C","T","Homozygous",34,42,80.95,0.56,20,21,0.49,38.09,41,51,20,15,0.93,1,1,"no","T/T","No",1,3.57,"XP_008198284.1:c.[317G>A]; XP_008198234.1:c.[317G>A]","XP_008198284.1:p.[Arg106Lys]; XP_008198234.1:p.[Arg106Lys]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2055,"NW_015451687.1",257018,"Deletion","G","-","Heterozygous",21,45,46.67,1,9,12,0.43,38.1,21,49,12,16,0.66,0.42,0.96,"no","-/G","No",1,153.53,"XP_008198284.1:c.[198delC]; XP_008198234.1:c.[198delC]","XP_008198284.1:p.[Tyr66fs]; XP_008198234.1:p.[Tyr66fs]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2056,"NW_015451687.1",257151,"SNV","G","A","Heterozygous",7,32,21.88,0.95,0,7,0,40.14,7,34,4,4,1.12,0.58,0.21,"no","A/G","No",1,13.15,"XP_008198234.1:c.[65C>T]; XP_008198284.1:c.[65C>T]","XP_008198234.1:p.[Thr22Ile]; XP_008198284.1:p.[Thr22Ile]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2057,"NW_015451687.1",258239,"SNV","T","G","Homozygous",22,22,100,1,12,11,0.48,37.18,23,23,10,12,null,1,1,"no","G/G","No",1,86.11,"XP_015840264.1:c.388A>C","XP_015840264.1:p.Ile130Leu","LOC107399100",107399100,null,"107399100 [Gene Symbol: LOC107399100] [Locus Tag: TcasGA2_TC010690] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399100] [Gene Type: protein-coding]","TcasGA2_TC010690; LOC107399100"]
[2058,"NW_015451687.1",258798,"SNV","C","T","Heterozygous",12,24,50,1,3,11,0.21,37.08,14,26,8,8,-0.35,0.71,0.98,"no","C/T","No",1,96.36,"XP_015840264.1:c.196G>A","XP_015840264.1:p.Glu66Lys","LOC107399100",107399100,null,"107399100 [Gene Symbol: LOC107399100] [Locus Tag: TcasGA2_TC010690] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399100] [Gene Type: protein-coding]","TcasGA2_TC010690; LOC107399100"]
[2059,"NW_015451687.1",258855,"SNV","A","G","Homozygous",22,27,81.48,0.58,13,18,0.42,37.23,31,36,10,12,-0.12,0.97,0.99,"no","A/G","No",1,3.78,"XP_015840264.1:c.139T>C","XP_015840264.1:p.Ser47Pro","LOC107399100",107399100,null,"107399100 [Gene Symbol: LOC107399100] [Locus Tag: TcasGA2_TC010690] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399100] [Gene Type: protein-coding]","TcasGA2_TC010690; LOC107399100"]
[2060,"NW_015451694.1",19340,"SNV","A","C","Heterozygous",15,62,24.19,1,5,10,0.33,38.33,15,62,7,7,0.15,0.49,0.13,"no","A/C","No",1,32.19,"XP_015840273.1:c.1278T>G","XP_015840273.1:p.Asp426Glu","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[2061,"NW_015451694.1",19792,"SNV","T","C","Homozygous",25,32,78.12,0.84,7,19,0.27,38.88,26,35,15,16,null,0.99,0.99,"no","C/C","No",1,8.07,"XP_015840273.1:c.826A>G","XP_015840273.1:p.Lys276Glu","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[2062,"NW_015451694.1",19992,"SNV","A","T","Heterozygous",16,43,37.21,1,3,16,0.16,38.5,19,54,9,8,0.1,0.27,0.74,"no","A/T","No",1,97.09,"XP_015840273.1:c.626T>A","XP_015840273.1:p.Leu209Gln","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[2063,"NW_015451694.1",20032,"SNV","T","C","Homozygous",31,31,100,1,20,14,0.41,39.45,34,34,18,21,null,1,1,"no","C/C","No",1,113.22,"XP_015840273.1:c.586A>G","XP_015840273.1:p.Lys196Glu","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[2064,"NW_015451694.1",20155,"SNV","C","T","Heterozygous",10,23,43.48,1,6,4,0.4,38.8,10,23,7,6,0.65,0.78,0.98,"no","C/T","No",1,76.02,"XP_015840273.1:c.463G>A","XP_015840273.1:p.Glu155Lys","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[2065,"NW_015451694.1","20417..20418","MNV","TT","CC","Heterozygous",9,37,24.32,1,5,4,0.44,35.56,9,40,5,5,-4.27,0.01,1,"no","complex","No",1,200,"XP_015840273.1:c.200_201delAAinsGG","XP_015840273.1:p.Glu67Gly","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[2066,"NW_015451697.1",19603,"Deletion","T","-","Heterozygous",5,21,23.81,0.98,5,0,0,40.8,5,25,1,5,2.48,0.28,0.42,"no","-/T","No",1,17.1,"XP_015840274.1:c.1374delA","XP_015840274.1:p.Leu459fs","LOC103312466",103312466,null,"103312466 [Gene Symbol: LOC103312466] [Locus Tag: TcasGA2_TC005193] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312466] [Gene Type: protein-coding]","LOC103312466; TcasGA2_TC005193"]
[2067,"NW_015451697.1","19692..19693","Deletion","CG","-","Heterozygous",7,31,22.58,1,1,6,0.14,35.29,7,36,3,4,-1.27,0.44,0.72,"no","complex","No",1,200,"XP_015840274.1:c.1284_1285delCG","XP_015840274.1:p.Asp428fs","LOC103312466",103312466,null,"103312466 [Gene Symbol: LOC103312466] [Locus Tag: TcasGA2_TC005193] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312466] [Gene Type: protein-coding]","LOC103312466; TcasGA2_TC005193"]
[2068,"NW_015451697.1",19704,"SNV","T","C","Heterozygous",10,26,38.46,1,2,9,0.18,37.3,11,29,6,7,-0.29,0.6,0.84,"no","C/T","No",1,69,"XP_015840274.1:c.1273A>G","XP_015840274.1:p.Asn425Asp","LOC103312466",103312466,null,"103312466 [Gene Symbol: LOC103312466] [Locus Tag: TcasGA2_TC005193] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312466] [Gene Type: protein-coding]","LOC103312466; TcasGA2_TC005193"]
[2069,"NW_015451702.1",29505,"SNV","C","T","Homozygous",27,27,100,1,22,5,0.19,38.26,27,27,11,17,null,1,1,"no","T/T","No",1,102.75,"XP_008197973.1:c.[471-14437C>T]; XP_015840282.1:c.[98+427C>T]; XP_968710.2:c.[67C>T]; XP_008197979.1:c.[44+8549C>T]","XP_968710.2:p.Pro23Ser","LOC657141",657141,null,"657141 [Gene Symbol: LOC657141] [Locus Tag: TcasGA2_TC031717] [Chromosome: Un] [Map Location: ] [Description: rho guanine nucleotide exchange factor 4] [Gene Type: protein-coding]","TcasGA2_TC031717; LOC657141"]
[2070,"NW_015451702.1",29515,"SNV","C","G","Homozygous",23,23,100,1,18,5,0.22,37.3,23,23,11,15,null,1,1,"no","G/G","No",1,89.12,"XP_015840282.1:c.[98+437C>G]; XP_008197973.1:c.[471-14427C>G]; XP_008197979.1:c.[44+8559C>G]; XP_968710.2:c.[77C>G]","XP_968710.2:p.Ala26Gly","LOC657141",657141,null,"657141 [Gene Symbol: LOC657141] [Locus Tag: TcasGA2_TC031717] [Chromosome: Un] [Map Location: ] [Description: rho guanine nucleotide exchange factor 4] [Gene Type: protein-coding]","TcasGA2_TC031717; LOC657141"]
[2071,"NW_015451702.1",61496,"SNV","A","T","Homozygous",20,20,100,1,18,2,0.1,38.2,20,20,9,13,null,1,1,"no","T/T","No",1,81.69,"XP_015840282.1:c.[2313A>T]; XP_008197979.1:c.[2259A>T]; XP_015840283.1:c.[2124A>T]; XP_015840284.1:c.[1782A>T]; XP_968710.2:c.[2346A>T]; XP_008197973.1:c.[2685A>T]","XP_015840282.1:p.[Glu771Asp]; XP_008197979.1:p.[Glu753Asp]; XP_015840283.1:p.[Glu708Asp]; XP_015840284.1:p.[Glu594Asp]; XP_968710.2:p.[Glu782Asp]; XP_008197973.1:p.[Glu895Asp]","LOC657141",657141,null,"657141 [Gene Symbol: LOC657141] [Locus Tag: TcasGA2_TC031717] [Chromosome: Un] [Map Location: ] [Description: rho guanine nucleotide exchange factor 4] [Gene Type: protein-coding]","TcasGA2_TC031717; LOC657141"]
[2072,"NW_015451702.1",67540,"SNV","T","G","Homozygous",22,22,100,1,19,4,0.17,38.32,23,23,9,19,null,1,1,"no","G/G","No",1,86.11,"XP_968788.2:c.3253A>C","XP_968788.2:p.Ile1085Leu","LOC657224",657224,null,"657224 [Gene Symbol: LOC657224] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: remodeling and spacing factor 1] [Gene Type: protein-coding]","LOC657224"]
[2073,"NW_015451702.1",169464,"SNV","A","C","Homozygous",20,20,100,1,16,4,0.2,37.1,20,20,13,11,null,1,1,"no","C/C","No",1,80.12,"XP_015840292.1:c.[2568A>C]; XP_015840295.1:c.[2568A>C]; XP_015840290.1:c.[2568A>C]; XP_015840289.1:c.[2568A>C]; XP_015840293.1:c.[2568A>C]; XP_015840291.1:c.[2568A>C]; XP_015840294.1:c.[2568A>C]; XP_015840287.1:c.[2568A>C]; XP_969667.1:c.[2568A>C]; XP_015840296.1:c.[2568A>C]; XP_015840288.1:c.[2568A>C]","XP_015840292.1:p.[Arg856Ser]; XP_015840295.1:p.[Arg856Ser]; XP_015840290.1:p.[Arg856Ser]; XP_015840289.1:p.[Arg856Ser]; XP_015840293.1:p.[Arg856Ser]; XP_015840291.1:p.[Arg856Ser]; XP_015840294.1:p.[Arg856Ser]; XP_015840287.1:p.[Arg856Ser]; XP_969667.1:p.[Arg856Ser]; XP_015840296.1:p.[Arg856Ser]; XP_015840288.1:p.[Arg856Ser]","LOC658165",658165,null,"658165 [Gene Symbol: LOC658165] [Locus Tag: TcasGA2_TC031720] [Chromosome: Un] [Map Location: ] [Description: protein unc-13 homolog B] [Gene Type: protein-coding]","TcasGA2_TC031720; LOC658165"]
[2074,"NW_015451702.1",216700,"SNV","A","T","Homozygous",27,27,100,1,11,18,0.38,37.67,29,29,14,18,null,1,1,"no","T/T","No",1,102.75,"XP_015840281.1:c.415A>T","XP_015840281.1:p.Thr139Ser","LOC107399113",107399113,null,"107399113 [Gene Symbol: LOC107399113] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399113] [Gene Type: protein-coding]","LOC107399113"]
[2075,"NW_015451723.1",3500,"SNV","A","G","Heterozygous",15,28,53.57,1,6,9,0.4,37.73,15,30,12,12,-2.05,0.22,0.92,"no","A/G","No",1,100.36,"XP_015840301.1:c.28A>G","XP_015840301.1:p.Ser10Gly","LOC107399117",107399117,null,"107399117 [Gene Symbol: LOC107399117] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399117] [Gene Type: protein-coding]","LOC107399117"]
[2076,"NW_015451723.1",3503,"SNV","A","G","Heterozygous",7,31,22.58,0.98,3,4,0.43,36.71,7,33,5,6,-2.69,0.14,1,"no","A/G","No",1,16.79,"XP_015840301.1:c.31A>G","XP_015840301.1:p.Lys11Glu","LOC107399117",107399117,null,"107399117 [Gene Symbol: LOC107399117] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399117] [Gene Type: protein-coding]","LOC107399117"]
[2077,"NW_015451723.1","4764..4765","MNV","AA","GG","Heterozygous",5,21,23.81,1,0,5,0,38.9,5,22,2,2,-0.92,0.19,0.58,"no","complex","No",1,200,"XP_008193733.1:c.39_40delAAinsGG","XP_008193733.1:p.Lys14Glu","LOC103313110",103313110,null,"103313110 [Gene Symbol: LOC103313110] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103313110] [Gene Type: protein-coding]","LOC103313110"]
[2078,"NW_015451723.1",5482,"SNV","A","G","Heterozygous",11,28,39.29,1,8,5,0.38,36.91,13,32,8,9,-0.8,0.35,0.62,"no","A/G","No",1,76.08,"XP_008193733.1:c.577A>G","XP_008193733.1:p.Lys193Glu","LOC103313110",103313110,null,"103313110 [Gene Symbol: LOC103313110] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103313110] [Gene Type: protein-coding]","LOC103313110"]
[2079,"NW_015451723.1",5515,"SNV","T","A","Heterozygous",10,40,25,1,3,8,0.27,38.4,11,43,7,7,0.2,0.77,0.99,"no","A/T","No",1,28.73,"XP_008193733.1:c.610T>A","XP_008193733.1:p.Tyr204Asn","LOC103313110",103313110,null,"103313110 [Gene Symbol: LOC103313110] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103313110] [Gene Type: protein-coding]","LOC103313110"]
[2080,"NW_015451776.1","35226..35227","MNV","TG","CA","Homozygous",21,21,100,1,12,13,0.48,36.12,25,25,13,18,null,1,1,"no","CA/CA","No",1,200,"XP_015840310.1:c.984_985delTGinsCA","XP_015840310.1:p.Val329Ile","LOC658551",658551,null,"658551 [Gene Symbol: LOC658551] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: G patch domain and KOW motifs-containing protein] [Gene Type: protein-coding]","LOC658551"]
[2081,"NW_015451780.1",231416,"SNV","T","C","Heterozygous",8,23,34.78,1,6,2,0.25,38.5,8,25,3,5,1.61,0.59,1,"no","C/T","No",1,54.65,"XP_015840314.1:c.5T>C","XP_015840314.1:p.Ile2Thr","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2082,"NW_015451780.1",231428,"SNV","A","G","Heterozygous",10,22,45.45,1,7,5,0.42,36.7,12,27,7,7,1.09,0.88,1,"no","A/G","No",1,80.01,"XP_015840314.1:c.17A>G","XP_015840314.1:p.Lys6Arg","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2083,"NW_015451780.1",231454,"SNV","A","G","Heterozygous",10,29,34.48,1,7,6,0.46,37.5,13,33,8,7,-0.34,0.53,0.97,"no","A/G","No",1,60.49,"XP_015840314.1:c.43A>G","XP_015840314.1:p.Ile15Val","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2084,"NW_015451780.1","231483..231484","MNV","TC","CT","Heterozygous",11,32,34.38,1,7,7,0.5,39.5,14,36,10,11,0.48,0.98,0.96,"no","complex","No",1,200,"XP_015840314.1:c.72_73delTCinsCT","XP_015840314.1:p.Leu25Phe","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2085,"NW_015451780.1",231655,"SNV","A","G","Heterozygous",12,24,50,1,4,9,0.31,38,13,26,10,11,-1.3,0.93,1,"no","A/G","No",1,96.3,"XP_015840314.1:c.244A>G","XP_015840314.1:p.Ile82Val","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2086,"NW_015451780.1",231658,"SNV","C","T","Heterozygous",9,25,36,1,5,5,0.5,39.56,10,27,6,8,1.36,0.4,0.79,"no","C/T","No",1,57.76,"XP_015840314.1:c.247C>T","XP_015840314.1:p.His83Tyr","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2087,"NW_015451780.1",231661,"SNV","C","G","Heterozygous",12,25,48,1,4,9,0.31,39.25,13,27,10,11,-0.24,0.93,1,"no","C/G","No",1,95.88,"XP_015840314.1:c.250C>G","XP_015840314.1:p.Gln84Glu","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2088,"NW_015451780.1",231682,"SNV","G","A","Heterozygous",11,24,45.83,1,4,8,0.33,40.18,12,28,9,10,2.26,0.71,0.99,"no","A/G","No",1,86.08,"XP_015840314.1:c.271G>A","XP_015840314.1:p.Gly91Arg","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2089,"NW_015451782.1",22432,"SNV","A","G","Heterozygous",18,32,56.25,1,13,8,0.38,38.39,21,38,14,14,0.63,0.99,1,"no","A/G","No",1,101.98,"XP_008194552.2:c.797T>C","XP_008194552.2:p.Val266Ala","LOC100142619",100142619,null,"100142619 [Gene Symbol: LOC100142619] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: probable RNA-directed DNA polymerase from transposon X-element] [Gene Type: protein-coding]","LOC100142619"]
[2090,"NW_015451788.1",4557,"SNV","G","A","Heterozygous",12,28,42.86,1,3,11,0.21,39.58,14,32,6,5,1.51,0.65,0.73,"no","A/G","No",1,87.67,"XP_008201200.1:c.67G>A","XP_008201200.1:p.Asp23Asn","LOC103315116",103315116,null,"103315116 [Gene Symbol: LOC103315116] [Locus Tag: TcasGA2_TC031671] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315116] [Gene Type: protein-coding]","TcasGA2_TC031671; LOC103315116"]
[2091,"NW_015451839.1",9295,"SNV","G","A","Heterozygous",11,27,40.74,1,8,3,0.27,36.82,11,27,5,7,-0.52,0.08,1,"no","A/G","No",1,77.83,"XP_015840339.1:c.559C>T","XP_015840339.1:p.His187Tyr","LOC107399147",107399147,null,"107399147 [Gene Symbol: LOC107399147] [Locus Tag: TcasGA2_TC031884] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399147] [Gene Type: protein-coding]","TcasGA2_TC031884; LOC107399147"]
[2092,"NW_015451839.1",9591,"SNV","C","T","Heterozygous",8,28,28.57,1,5,5,0.5,37.88,10,33,4,8,-0.13,0.69,0.87,"no","C/T","No",1,39.07,"XP_015840339.1:c.263G>A","XP_015840339.1:p.Arg88Lys","LOC107399147",107399147,null,"107399147 [Gene Symbol: LOC107399147] [Locus Tag: TcasGA2_TC031884] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399147] [Gene Type: protein-coding]","TcasGA2_TC031884; LOC107399147"]
[2093,"NW_015451839.1",9631,"SNV","C","T","Heterozygous",8,26,30.77,1,4,5,0.44,34.88,9,29,4,6,-1.78,0.88,1,"no","C/T","No",1,42.19,"XP_015840339.1:c.223G>A","XP_015840339.1:p.Ala75Thr","LOC107399147",107399147,null,"107399147 [Gene Symbol: LOC107399147] [Locus Tag: TcasGA2_TC031884] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399147] [Gene Type: protein-coding]","TcasGA2_TC031884; LOC107399147"]
[2094,"NW_015451872.1",11608,"SNV","T","C","Heterozygous",9,22,40.91,1,5,5,0.5,37.11,10,24,6,7,-1.84,0.7,0.98,"no","C/T","No",1,67.38,"XP_015840342.1:c.[892A>G]; XP_015840344.1:c.[892A>G]; XP_015840343.1:c.[892A>G]","XP_015840342.1:p.[Ile298Val]; XP_015840344.1:p.[Ile298Val]; XP_015840343.1:p.[Ile298Val]","LOC107399152",107399152,null,"107399152 [Gene Symbol: LOC107399152] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399152] [Gene Type: protein-coding]","LOC107399152"]
[2095,"NW_015451872.1",11766,"SNV","G","A","Homozygous",23,25,92,1,12,14,0.46,38.39,26,28,13,14,null,0.99,1,"no","A/A","No",1,33.78,"XP_015840342.1:c.[734C>T]; XP_015840344.1:c.[734C>T]; XP_015840343.1:c.[734C>T]","XP_015840342.1:p.[Thr245Ile]; XP_015840344.1:p.[Thr245Ile]; XP_015840343.1:p.[Thr245Ile]","LOC107399152",107399152,null,"107399152 [Gene Symbol: LOC107399152] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399152] [Gene Type: protein-coding]","LOC107399152"]
[2096,"NW_015451872.1",12402,"SNV","C","G","Heterozygous",8,33,24.24,0.99,5,5,0.5,37.62,10,35,7,7,-1.03,0.56,0.88,"no","C/G","No",1,22.72,"XP_015840344.1:c.[98G>C]; XP_015840342.1:c.[98G>C]; XP_015840343.1:c.[98G>C]","XP_015840344.1:p.[Arg33Thr]; XP_015840342.1:p.[Arg33Thr]; XP_015840343.1:p.[Arg33Thr]","LOC107399152",107399152,null,"107399152 [Gene Symbol: LOC107399152] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399152] [Gene Type: protein-coding]","LOC107399152"]
[2097,"NW_015451896.1",339,"SNV","G","A","Heterozygous",9,23,39.13,1,9,2,0.18,39.11,11,30,5,7,0.31,0.21,0.38,"no","A/G","No",1,63.39,"XP_015840351.1:c.502C>T","XP_015840351.1:p.Arg168Cys","LOC107399159",107399159,null,"107399159 [Gene Symbol: LOC107399159] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399159] [Gene Type: protein-coding]","LOC107399159"]
[2098,"NW_015451896.1",1555,"SNV","A","G","Heterozygous",7,25,28,1,5,3,0.38,39,8,28,6,6,0.48,0.88,0.97,"no","A/G","No",1,33.38,"XP_015840350.1:c.192A>G","XP_015840350.1:p.Ile64Met","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2099,"NW_015451896.1","1858..1859","MNV","GG","AA","Heterozygous",13,22,59.09,1,6,9,0.4,38.96,15,24,12,13,0.68,0.84,0.72,"no","complex","No",1,200,"XP_015840350.1:c.495_496delGGinsAA","XP_015840350.1:p.Asp166Asn","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2100,"NW_015451896.1",1996,"SNV","T","G","Heterozygous",12,23,52.17,1,0,12,0,38.67,12,23,7,5,0.28,0.51,0.39,"no","G/T","No",1,85.37,"XP_015840350.1:c.633T>G","XP_015840350.1:p.Asn211Lys","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2101,"NW_015451896.1",2288,"SNV","G","A","Heterozygous",14,21,66.67,1,3,12,0.2,39.57,15,22,9,9,1.42,0.59,0.86,"no","A/G","No",1,44.47,"XP_015840350.1:c.925G>A","XP_015840350.1:p.Glu309Lys","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2102,"NW_015451896.1",2307,"SNV","C","G","Heterozygous",14,25,56,1,4,11,0.27,38.5,15,26,9,9,-0.33,0.97,0.89,"no","C/G","No",1,83.25,"XP_015840350.1:c.944C>G","XP_015840350.1:p.Thr315Ser","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2103,"NW_015451896.1",2312,"SNV","G","A","Heterozygous",11,21,52.38,1,4,8,0.33,39.91,12,22,8,8,2.18,0.59,0.98,"no","A/G","No",1,82.51,"XP_015840350.1:c.949G>A","XP_015840350.1:p.Glu317Lys","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2104,"NW_015451896.1","2319^2320","Insertion","-","AA","Heterozygous",11,22,50,1,6,7,0.46,39.68,13,24,9,10,3.03,0.82,1,"no","complex","No",1,200,"XP_015840350.1:c.956_957insAA","XP_015840350.1:p.Thr320fs","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2105,"NW_015451896.1",2519,"SNV","A","G","Heterozygous",11,29,37.93,1,8,5,0.38,38.27,13,31,8,10,-0.16,0.49,1,"no","A/G","No",1,73.16,"XP_015840350.1:c.1156A>G","XP_015840350.1:p.Lys386Glu","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2106,"NW_015451896.1",2768,"SNV","C","T","Heterozygous",11,20,55,1,9,7,0.44,35.91,16,25,7,7,-1.22,0.18,0.98,"no","C/T","No",1,72.91,"XP_015840345.1:c.19C>T","XP_015840345.1:p.Pro7Ser","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[2107,"NW_015451896.1",2975,"SNV","A","G","Heterozygous",11,20,55,1,7,4,0.36,36.91,11,20,7,7,0.76,0.9,1,"no","A/G","No",1,71.89,"XP_015840345.1:c.226A>G","XP_015840345.1:p.Arg76Gly","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[2108,"NW_015451896.1",4138,"SNV","A","C","Heterozygous",11,32,34.38,1,4,7,0.36,38.27,11,32,7,10,1.55,0.28,1,"no","A/C","No",1,64.66,"XP_015840345.1:c.1306A>C","XP_015840345.1:p.Asn436His","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[2109,"NW_015451896.1",4168,"SNV","G","A","Heterozygous",13,34,38.24,1,6,9,0.4,38.46,15,41,8,11,1.22,0.92,0.99,"no","A/G","No",1,83.78,"XP_015840345.1:c.1336G>A","XP_015840345.1:p.Glu446Lys","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[2110,"NW_015451896.1",4214,"SNV","T","A","Heterozygous",10,29,34.48,1,5,5,0.5,37.7,10,30,6,7,-0.55,0.03,0.53,"no","A/T","No",1,59.38,"XP_015840345.1:c.1382T>A","XP_015840345.1:p.Phe461Tyr","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[2111,"NW_015451896.1",36331,"SNV","C","T","Heterozygous",11,46,23.91,1,6,5,0.45,39.27,11,53,7,10,1.16,0.05,0.86,"no","C/T","No",1,24.65,"XP_015840348.1:c.[59C>T]; XP_015840349.1:c.[35C>T]","XP_015840348.1:p.[Ser20Phe]; XP_015840349.1:p.[Ser12Phe]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2112,"NW_015451896.1",36366,"SNV","G","A","Heterozygous",14,36,38.89,1,8,6,0.43,38.5,14,39,10,12,1.93,0.37,0.92,"no","A/G","No",1,90.81,"XP_015840349.1:c.[70G>A]; XP_015840348.1:c.[94G>A]","XP_015840349.1:p.[Asp24Asn]; XP_015840348.1:p.[Asp32Asn]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2113,"NW_015451896.1",36505,"SNV","A","G","Homozygous",29,29,100,1,17,15,0.47,37.76,32,32,14,17,null,1,1,"no","G/G","No",1,107.17,"XP_015840348.1:c.[233A>G]; XP_015840349.1:c.[209A>G]","XP_015840348.1:p.[Glu78Gly]; XP_015840349.1:p.[Glu70Gly]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2114,"NW_015451896.1",36535,"SNV","C","G","Heterozygous",10,43,23.26,1,7,3,0.3,37.7,10,48,6,8,0.6,0.47,1,"no","C/G","No",1,23.19,"XP_015840349.1:c.[239C>G]; XP_015840348.1:c.[263C>G]","XP_015840349.1:p.[Ala80Gly]; XP_015840348.1:p.[Ala88Gly]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2115,"NW_015451896.1",36544,"SNV","A","G","Homozygous",41,41,100,1,33,16,0.33,36.61,49,49,25,23,null,1,1,"no","G/G","No",1,143.21,"XP_015840349.1:c.[248A>G]; XP_015840348.1:c.[272A>G]","XP_015840349.1:p.[His83Arg]; XP_015840348.1:p.[His91Arg]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2116,"NW_015451896.1",36558,"SNV","C","T","Heterozygous",10,46,21.74,0.98,7,4,0.36,35.9,11,52,7,10,-0.47,0.51,0.98,"no","C/T","No",1,17.71,"XP_015840349.1:c.[262C>T]; XP_015840348.1:c.[286C>T]","XP_015840349.1:p.[Pro88Ser]; XP_015840348.1:p.[Pro96Ser]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2117,"NW_015451896.1","36704^36705","Insertion","-","C","Heterozygous",15,27,55.56,1,6,12,0.33,37.33,18,33,9,10,-0.39,0.83,1,"no","-/C","No",1,79.92,"XP_015840349.1:c.[408_409insC]; XP_015840348.1:c.[432_433insC]","XP_015840349.1:p.[Arg137fs]; XP_015840348.1:p.[Arg145fs]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2118,"NW_015451896.1",36871,"SNV","G","A","Heterozygous",12,36,33.33,1,8,6,0.43,38.42,14,44,6,11,1.81,0.39,0.98,"no","A/G","No",1,65.46,"XP_015840349.1:c.[575G>A]; XP_015840348.1:c.[599G>A]","XP_015840349.1:p.[Gly192Glu]; XP_015840348.1:p.[Gly200Glu]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2119,"NW_015451896.1","61007..61008","MNV","CA","AC","Heterozygous",6,25,24,1,6,1,0.14,37.83,7,26,5,5,-0.72,0.46,0.61,"no","complex","No",1,200,"XP_015840346.1:c.125_126delCAinsAC","XP_015840346.1:p.Pro42His","LOC107399155",107399155,null,"107399155 [Gene Symbol: LOC107399155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399155] [Gene Type: protein-coding]","LOC107399155"]
[2120,"NW_015451896.1",61149,"SNV","G","A","Heterozygous",7,30,23.33,0.99,7,0,0,37.86,7,34,3,5,0.15,0.12,0.17,"no","A/G","No",1,18.53,"XP_015840346.1:c.267G>A","XP_015840346.1:p.Met89Ile","LOC107399155",107399155,null,"107399155 [Gene Symbol: LOC107399155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399155] [Gene Type: protein-coding]","LOC107399155"]
[2121,"NW_015451896.1",71446,"SNV","A","T","Heterozygous",9,25,36,1,0,9,0,36.11,9,25,4,6,0.51,0.11,0.28,"no","A/T","No",1,57.89,"XP_015840346.1:c.1049A>T","XP_015840346.1:p.Glu350Val","LOC107399155",107399155,null,"107399155 [Gene Symbol: LOC107399155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399155] [Gene Type: protein-coding]","LOC107399155"]
[2122,"NW_015451916.1",2575,"SNV","C","T","Homozygous",187,187,100,1,112,97,0.46,37.98,209,209,80,86,null,1,1,"no","T/T","No",1,200,"XP_015840352.1:c.470C>T","XP_015840352.1:p.Pro157Leu","LOC107399160",107399160,null,"107399160 [Gene Symbol: LOC107399160] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399160] [Gene Type: protein-coding]","LOC107399160"]
[2123,"NW_015451916.1",2914,"SNV","A","G","Heterozygous",36,153,23.53,1,22,23,0.49,36.36,45,177,23,26,-1.73,0.16,1,"no","A/G","No",1,49.7,"XP_015840352.1:c.809A>G","XP_015840352.1:p.Lys270Arg","LOC107399160",107399160,null,"107399160 [Gene Symbol: LOC107399160] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399160] [Gene Type: protein-coding]","LOC107399160"]
[2124,"NW_015451918.1",472,"SNV","A","G","Homozygous",20,21,95.24,1,18,2,0.1,37.75,20,22,9,13,null,0.94,0.97,"no","G/G","No",1,54.59,"XP_008198322.1:c.311A>G","XP_008198322.1:p.Tyr104Cys","LOC654897",654897,null,"654897 [Gene Symbol: LOC654897] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: eukaryotic translation initiation factor 3 subunit D] [Gene Type: protein-coding]","LOC654897"]
[2125,"NW_015451918.1",477,"SNV","C","T","Homozygous",19,20,95,1,17,2,0.11,37.68,19,21,9,12,null,0.94,0.98,"no","T/T","No",1,50.19,"XP_008198322.1:c.316C>T","XP_008198322.1:p.Arg106Trp","LOC654897",654897,null,"654897 [Gene Symbol: LOC654897] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: eukaryotic translation initiation factor 3 subunit D] [Gene Type: protein-coding]","LOC654897"]
[2126,"NW_015451937.1",718757,"SNV","G","A","Heterozygous",8,20,40,1,5,4,0.44,37.88,9,23,6,6,-0.58,0.92,0.93,"no","A/G","No",1,59.17,"XP_015840357.1:c.207G>A","XP_015840357.1:p.Trp69*","LOC107399165",107399165,null,"107399165 [Gene Symbol: LOC107399165] [Locus Tag: TcasGA2_TC002310] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399165] [Gene Type: protein-coding]","LOC107399165; TcasGA2_TC002310"]
[2127,"NW_015451977.1",1170,"SNV","G","A","Heterozygous",9,31,29.03,1,0,9,0,39.44,9,31,5,6,0.89,0.07,0.1,"no","A/G","No",1,41.11,"XP_015840400.1:c.[33G>A]; XP_015840401.1:c.[33G>A]; XP_008197342.1:c.[33G>A]","XP_015840400.1:p.[Met11Ile]; XP_015840401.1:p.[Met11Ile]; XP_008197342.1:p.[Met11Ile]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2128,"NW_015451977.1",1173,"Deletion","G","-","Heterozygous",8,32,25,1,0,8,0,38.38,8,32,4,5,0.41,0.08,0.11,"no","-/G","Yes",3,24.49,"XP_008197342.1:c.[36delG]; XP_015840401.1:c.[36delG]; XP_015840400.1:c.[36delG]","XP_008197342.1:p.[Gly13fs]; XP_015840401.1:p.[Gly13fs]; XP_015840400.1:p.[Gly13fs]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2129,"NW_015451977.1",1234,"SNV","G","A","Heterozygous",12,24,50,1,6,9,0.4,36.08,15,28,8,8,-1.04,0.85,0.97,"no","A/G","No",1,96.37,"XP_008197342.1:c.[97G>A]; XP_015840400.1:c.[97G>A]; XP_015840401.1:c.[97G>A]","XP_008197342.1:p.[Asp33Asn]; XP_015840400.1:p.[Asp33Asn]; XP_015840401.1:p.[Asp33Asn]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2130,"NW_015451977.1",1487,"SNV","G","C","Heterozygous",14,30,46.67,1,3,11,0.21,35.29,14,34,8,8,-1.83,0.95,0.6,"no","C/G","No",1,107.58,"XP_015840400.1:c.[350G>C]; XP_008197342.1:c.[350G>C]; XP_015840401.1:c.[350G>C]","XP_015840400.1:p.[Gly117Ala]; XP_008197342.1:p.[Gly117Ala]; XP_015840401.1:p.[Gly117Ala]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2131,"NW_015451977.1",1778,"Deletion","G","-","Homozygous",49,49,100,1,33,20,0.38,35.73,53,53,31,30,null,1,1,"no","-/-","No",1,200,"XP_015840401.1:c.[641delG]; XP_008197342.1:c.[641delG]; XP_015840400.1:c.[641delG]","XP_015840401.1:p.[Glu215fs]; XP_008197342.1:p.[Glu215fs]; XP_015840400.1:p.[Glu215fs]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2132,"NW_015451977.1","1788..1789","MNV","GA","AG","Homozygous",36,42,85.71,1,21,18,0.46,35.84,39,45,29,26,1.98,1,1,"no","AG/AG","No",1,200,"XP_008197342.1:c.[651_652delGAinsAG]; XP_015840401.1:c.[651_652delGAinsAG]; XP_015840400.1:c.[651_652delGAinsAG]","XP_008197342.1:p.[Thr218Ala]; XP_015840401.1:p.[Thr218Ala]; XP_015840400.1:p.[Thr218Ala]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2133,"NW_015451977.1",1818,"SNV","C","G","Heterozygous",12,40,30,1,4,10,0.29,34.5,14,43,9,9,-2.64,0.14,0.76,"no","C/G","No",1,54.32,"XP_015840400.1:c.[681C>G]; XP_008197342.1:c.[681C>G]; XP_015840401.1:c.[681C>G]","XP_015840400.1:p.[Asn227Lys]; XP_008197342.1:p.[Asn227Lys]; XP_015840401.1:p.[Asn227Lys]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2134,"NW_015451977.1",2015,"SNV","C","T","Heterozygous",18,30,60,1,6,12,0.33,39.11,18,33,10,11,0.83,0.55,1,"no","C/T","No",1,83.41,"XP_008197342.1:c.[747+131C>T]; XP_015840401.1:c.[878C>T]; XP_015840400.1:c.[878C>T]","XP_015840401.1:p.[Pro293Leu]; XP_015840400.1:p.[Pro293Leu]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2135,"NW_015451977.1",2158,"SNV","A","G","Heterozygous",22,28,78.57,0.93,15,10,0.4,37.18,25,34,12,14,-0.59,0.94,1,"no","A/G","No",1,11.69,"XP_008197342.1:c.[747+274A>G]; XP_015840401.1:c.[940-49A>G]; XP_015840400.1:c.[1021A>G]","XP_015840400.1:p.Asn341Asp","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2136,"NW_015451977.1",2194,"SNV","C","T","Heterozygous",12,33,36.36,1,4,9,0.31,38.25,13,40,7,8,-0.82,0.79,0.74,"no","C/T","No",1,73.53,"XP_015840400.1:c.[1057C>T]; XP_008197342.1:c.[747+310C>T]; XP_015840401.1:c.[940-13C>T]","XP_015840400.1:p.Leu353Phe","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2137,"NW_015451977.1",2363,"SNV","G","A","Homozygous",34,39,87.18,1,13,21,0.38,38.21,34,40,20,20,null,1,1,"no","A/A","No",1,31.13,"XP_008197342.1:c.[747+479G>A]; XP_015840400.1:c.[1226G>A]","XP_015840400.1:p.Arg409Lys","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2138,"NW_015451977.1",2952,"SNV","A","T","Heterozygous",13,21,61.9,1,4,9,0.31,36.23,13,22,7,8,-2.1,0.66,0.56,"no","A/T","No",1,56.13,"XP_008197342.1:c.[748-741A>T]; XP_015840400.1:c.[1815A>T]","XP_015840400.1:p.Lys605Asn","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2139,"NW_015451977.1",3077,"SNV","T","C","Heterozygous",6,27,22.22,0.97,4,4,0.5,37.17,8,29,5,3,-0.09,0.52,0.97,"no","C/T","No",1,15.35,"XP_008197342.1:c.[748-616T>C]; XP_015840400.1:c.[1940T>C]","XP_015840400.1:p.Leu647Ser","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2140,"NW_015451987.1",2116,"SNV","G","C","Heterozygous",7,27,25.93,1,7,0,0,39.43,7,28,5,6,1.22,0.02,0.25,"no","C/G","No",1,26.62,"XP_015840403.1:c.235G>C","XP_015840403.1:p.Val79Leu","LOC103314505",103314505,null,"103314505 [Gene Symbol: LOC103314505] [Locus Tag: TcasGA2_TC030940] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314505] [Gene Type: protein-coding]","LOC103314505; TcasGA2_TC030940"]
[2141,"NW_015451987.1",2176,"SNV","G","A","Heterozygous",18,43,41.86,1,16,6,0.27,37.78,22,51,10,14,-0.64,0.33,0.4,"no","A/G","No",1,122.19,"XP_015840403.1:c.295G>A","XP_015840403.1:p.Val99Ile","LOC103314505",103314505,null,"103314505 [Gene Symbol: LOC103314505] [Locus Tag: TcasGA2_TC030940] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314505] [Gene Type: protein-coding]","LOC103314505; TcasGA2_TC030940"]
[2142,"NW_015452063.1",949,"SNV","T","A","Heterozygous",10,20,50,1,4,6,0.4,39.7,10,24,7,6,2.83,0.45,0.77,"no","A/T","No",1,74.39,"XP_015840424.1:c.61T>A","XP_015840424.1:p.Leu21Met","LOC107399182",107399182,null,"107399182 [Gene Symbol: LOC107399182] [Locus Tag: TcasGA2_TC030323] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399182] [Gene Type: protein-coding]","LOC107399182; TcasGA2_TC030323"]
[2143,"NW_015452075.1",5651,"SNV","T","A","Homozygous",27,27,100,1,11,19,0.37,39.22,30,30,18,17,null,1,1,"no","A/A","No",1,102.75,"XP_008191547.1:c.320A>T","XP_008191547.1:p.Gln107Leu","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[2144,"NW_015452075.1",5667,"SNV","G","T","Heterozygous",10,23,43.48,1,4,6,0.4,38.6,10,23,6,7,1.3,0.5,1,"no","G/T","No",1,72.71,"XP_008191547.1:c.304C>A","XP_008191547.1:p.Pro102Thr","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[2145,"NW_015452075.1",5782,"SNV","A","C","Homozygous",39,39,100,1,30,12,0.29,38.9,42,42,21,25,null,1,1,"no","C/C","No",1,137.32,"XP_008191547.1:c.189T>G","XP_008191547.1:p.Cys63Trp","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[2146,"NW_015452075.1",5813,"SNV","A","G","Heterozygous",10,34,29.41,1,7,3,0.3,36.9,10,37,6,7,0.72,0.52,1,"no","A/G","No",1,46.59,"XP_008191547.1:c.158T>C","XP_008191547.1:p.Leu53Pro","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[2147,"NW_015452075.1",5948,"SNV","A","G","Homozygous",29,29,100,1,14,17,0.45,38.24,31,31,17,20,null,1,1,"no","G/G","No",1,107.17,"XP_008191547.1:c.23T>C","XP_008191547.1:p.Ile8Thr","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[2148,"NW_015452075.1",9888,"SNV","T","C","Heterozygous",10,27,37.04,1,8,2,0.2,39,10,28,6,7,0.33,0.3,0.38,"no","C/T","No",1,66.23,"XP_015840425.1:c.404A>G","XP_015840425.1:p.Asp135Gly","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[2149,"NW_015452075.1",9901,"SNV","T","C","Heterozygous",10,26,38.46,1,7,3,0.3,39.4,10,27,6,7,0.26,0.3,0.65,"no","C/T","No",1,69.03,"XP_015840425.1:c.391A>G","XP_015840425.1:p.Asn131Asp","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[2150,"NW_015452075.1",9942,"SNV","C","T","Heterozygous",15,25,60,1,11,6,0.35,37.47,17,31,10,9,-2.25,0.79,0.86,"no","C/T","No",1,71.79,"XP_015840425.1:c.350G>A","XP_015840425.1:p.Arg117Lys","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[2151,"NW_015452075.1","9954..9955","MNV","AC","CT","Heterozygous",12,20,60,1,10,4,0.29,37.54,14,23,9,8,-0.38,0.91,0.68,"no","complex","No",1,200,"XP_015840425.1:c.337_338delGTinsAG","XP_015840425.1:p.Val113Arg","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[2152,"NW_015452103.1",781,"SNV","C","T","Homozygous",74,79,93.67,1,49,30,0.38,37.95,79,84,36,47,null,0.99,1,"no","T/T","No",1,142.47,"XP_008198969.1:c.223C>T","XP_008198969.1:p.Arg75Cys","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2153,"NW_015452103.1",820,"SNV","A","G","Homozygous",84,84,100,1,67,26,0.28,38.11,93,93,40,50,null,1,1,"no","G/G","No",1,156.54,"XP_008198969.1:c.262A>G","XP_008198969.1:p.Ile88Val","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2154,"NW_015452103.1",886,"SNV","A","G","Homozygous",77,77,100,1,42,40,0.49,36.86,82,82,33,42,null,1,1,"no","G/G","No",1,200,"XP_008198969.1:c.328A>G","XP_008198969.1:p.Ser110Gly","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2155,"NW_015452103.1",905,"SNV","T","C","Homozygous",72,72,100,1,37,40,0.48,38.08,77,77,31,39,null,1,1,"no","C/C","No",1,200,"XP_008198969.1:c.347T>C","XP_008198969.1:p.Leu116Pro","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2156,"NW_015452103.1",947,"SNV","T","C","Homozygous",64,64,100,1,37,36,0.49,37.09,73,73,30,37,null,1,1,"no","C/C","No",1,200,"XP_008198969.1:c.389T>C","XP_008198969.1:p.Met130Thr","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2157,"NW_015452103.1",1126,"SNV","A","G","Heterozygous",40,54,74.07,1,24,23,0.49,37.8,47,61,23,29,-0.64,0.99,1,"no","A/G","No",1,40.62,"XP_008198969.1:c.568A>G","XP_008198969.1:p.Ile190Val","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2158,"NW_015452103.1",1203,"Deletion","G","-","Homozygous",63,63,100,1,36,40,0.47,36,76,76,39,41,null,1,1,"no","-/-","No",1,200,"XP_008198969.1:c.645delG","XP_008198969.1:p.Ala216fs","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2159,"NW_015452103.1",1238,"SNV","T","C","Homozygous",48,53,90.57,1,22,35,0.39,36.54,57,63,31,31,null,1,1,"no","C/C","No",1,65.62,"XP_008198969.1:c.680T>C","XP_008198969.1:p.Leu227Pro","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2160,"NW_015452103.1",1250,"SNV","A","G","Homozygous",50,57,87.72,1,19,39,0.33,37.64,58,66,30,32,null,0.99,1,"no","G/G","No",1,56.65,"XP_008198969.1:c.692A>G","XP_008198969.1:p.Asn231Ser","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2161,"NW_015452103.1",1259,"SNV","C","A","Homozygous",35,42,83.33,0.93,14,25,0.36,34.97,39,47,23,24,-1.43,0.99,1,"no","A/A","No",1,11.83,"XP_008198969.1:c.701C>A","XP_008198969.1:p.Thr234Asn","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2162,"NW_015452103.1",1273,"SNV","T","A","Homozygous",46,46,100,1,11,41,0.21,37.52,52,52,26,26,null,1,1,"no","A/A","No",1,159.55,"XP_008198969.1:c.715T>A","XP_008198969.1:p.*239Lys","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2163,"NW_015452111.1",289,"SNV","T","C","Heterozygous",16,24,66.67,1,11,10,0.48,37.56,21,29,10,10,-0.64,0.93,1,"no","C/T","No",1,47.84,"XP_001808125.1:c.719A>G","XP_001808125.1:p.Gln240Arg","LOC100142014",100142014,null,"100142014 [Gene Symbol: LOC100142014] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142014] [Gene Type: protein-coding]","LOC100142014"]
[2164,"NW_015452119.1",2798,"SNV","T","G","Homozygous",27,27,100,1,11,16,0.41,39,27,27,17,13,null,1,1,"no","G/G","No",1,101.16,"XP_008191977.1:c.[295A>C]; XP_008192016.1:c.[277A>C]","XP_008191977.1:p.[Lys99Gln]; XP_008192016.1:p.[Lys93Gln]","LOC659059",659059,null,"659059 [Gene Symbol: LOC659059] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: probable tyrosyl-DNA phosphodiesterase] [Gene Type: protein-coding]","LOC659059"]
[2165,"NW_015452119.1","2801..2802","MNV","TG","CA","Homozygous",24,24,100,1,11,13,0.46,39.46,24,24,16,11,null,1,1,"no","CA/CA","No",1,200,"XP_008192016.1:c.[273_274delCAinsTG]; XP_008191977.1:c.[291_292delCAinsTG]","XP_008192016.1:p.[Thr92Ala]; XP_008191977.1:p.[Thr98Ala]","LOC659059",659059,null,"659059 [Gene Symbol: LOC659059] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: probable tyrosyl-DNA phosphodiesterase] [Gene Type: protein-coding]","LOC659059"]
[2166,"NW_015452119.1",4122,"SNV","T","G","Homozygous",23,23,100,1,14,11,0.44,38.22,25,25,12,16,null,1,1,"no","G/G","No",1,89.12,"XP_970564.1:c.531A>C","XP_970564.1:p.Glu177Asp","LOC659139",659139,null,"659139 [Gene Symbol: LOC659139] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: E3 ubiquitin-protein ligase RING1] [Gene Type: protein-coding]","LOC659139"]
[2167,"NW_015452142.1","23828..23829","Replacement","CA","T","Heterozygous",9,20,45,1,3,6,0.33,38.19,9,23,6,6,-1.12,0.79,1,"no","complex","No",1,200,"XP_008200958.2:c.720_721delTGinsA","XP_008200958.2:p.Tyr240fs","LOC103315049",103315049,null,"103315049 [Gene Symbol: LOC103315049] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative nuclease HARBI1] [Gene Type: protein-coding]","LOC103315049"]
[2168,"NW_015452142.1","23833..23836","Deletion","AATA","-","Heterozygous",9,20,45,1,3,6,0.33,37.33,9,21,6,6,-2.29,0.66,0.94,"no","complex","No",1,200,"XP_008200958.2:c.713_716delTATT","XP_008200958.2:p.Val238fs","LOC103315049",103315049,null,"103315049 [Gene Symbol: LOC103315049] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative nuclease HARBI1] [Gene Type: protein-coding]","LOC103315049"]
[2169,"NW_015452142.1",26748,"SNV","G","C","Heterozygous",9,25,36,1,4,5,0.44,37.67,9,27,5,6,-0.85,0.74,1,"no","C/G","No",1,57.71,"XP_015840428.1:c.420C>G","XP_015840428.1:p.Asn140Lys","LOC107399187",107399187,null,"107399187 [Gene Symbol: LOC107399187] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399187] [Gene Type: protein-coding]","LOC107399187"]
[2170,"NW_015452142.1",26752,"SNV","C","T","Heterozygous",6,24,25,0.99,0,6,0,38.5,6,26,3,6,0.13,0.03,0.16,"no","C/T","No",1,22.39,"XP_015840428.1:c.416G>A","XP_015840428.1:p.Cys139Tyr","LOC107399187",107399187,null,"107399187 [Gene Symbol: LOC107399187] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399187] [Gene Type: protein-coding]","LOC107399187"]
[2171,"NW_015452165.1",17598,"SNV","G","A","Heterozygous",9,35,25.71,1,5,4,0.44,39.89,9,39,5,5,1.53,0.16,0.66,"no","A/G","No",1,30,"XP_015840431.1:c.143G>A","XP_015840431.1:p.Arg48Lys","LOC107399193",107399193,null,"107399193 [Gene Symbol: LOC107399193] [Locus Tag: TcasGA2_TC031256] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399193] [Gene Type: protein-coding]","TcasGA2_TC031256; LOC107399193"]
[2172,"NW_015452165.1",17607,"SNV","G","A","Heterozygous",10,39,25.64,1,10,1,0.09,40,11,48,7,7,0.88,0.14,0.45,"no","A/G","No",1,31.5,"XP_015840431.1:c.152G>A","XP_015840431.1:p.Arg51His","LOC107399193",107399193,null,"107399193 [Gene Symbol: LOC107399193] [Locus Tag: TcasGA2_TC031256] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399193] [Gene Type: protein-coding]","TcasGA2_TC031256; LOC107399193"]
[2173,"NW_015452165.1",17702,"SNV","A","G","Heterozygous",46,75,61.33,1,38,24,0.39,39.07,62,95,31,29,-1.97,0.98,0.99,"no","A/G","No",1,200,"XP_015840431.1:c.247A>G","XP_015840431.1:p.Lys83Glu","LOC107399193",107399193,null,"107399193 [Gene Symbol: LOC107399193] [Locus Tag: TcasGA2_TC031256] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399193] [Gene Type: protein-coding]","TcasGA2_TC031256; LOC107399193"]
[2174,"NW_015452170.1",2348,"SNV","A","G","Heterozygous",10,29,34.48,1,9,4,0.31,37.8,13,38,6,9,-0.53,0.12,0.83,"no","A/G","No",1,60.45,"XP_008192781.1:c.116A>G","XP_008192781.1:p.Gln39Arg","LOC103312146",103312146,null,"103312146 [Gene Symbol: LOC103312146] [Locus Tag: TcasGA2_TC035044] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312146] [Gene Type: protein-coding]","TcasGA2_TC035044; LOC103312146"]
[2175,"NW_015452170.1",2352,"SNV","C","A","Heterozygous",10,31,32.26,1,9,4,0.31,38.4,13,40,6,9,0.42,0.5,0.57,"no","A/C","No",1,50.23,"XP_008192781.1:c.120C>A","XP_008192781.1:p.Ser40Arg","LOC103312146",103312146,null,"103312146 [Gene Symbol: LOC103312146] [Locus Tag: TcasGA2_TC035044] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312146] [Gene Type: protein-coding]","TcasGA2_TC035044; LOC103312146"]
[2176,"NW_015452170.1",2672,"SNV","C","T","Heterozygous",10,23,43.48,1,5,8,0.38,38.6,13,26,8,8,0.71,0.68,1,"no","C/T","No",1,76.01,"XP_008192781.1:c.440C>T","XP_008192781.1:p.Ser147Leu","LOC103312146",103312146,null,"103312146 [Gene Symbol: LOC103312146] [Locus Tag: TcasGA2_TC035044] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312146] [Gene Type: protein-coding]","TcasGA2_TC035044; LOC103312146"]
[2177,"NW_015452196.1",4916,"SNV","A","G","Heterozygous",14,21,66.67,1,7,11,0.39,38.71,18,28,8,8,0.04,0.51,0.98,"no","A/G","No",1,43.56,"XP_015840434.1:c.283A>G","XP_015840434.1:p.Lys95Glu","LOC107399195",107399195,null,"107399195 [Gene Symbol: LOC107399195] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399195] [Gene Type: protein-coding]","LOC107399195"]
[2178,"NW_015452199.1",1558,"SNV","G","A","Heterozygous",10,32,31.25,1,10,4,0.29,38.9,14,38,8,6,-0.65,0.64,1,"no","A/G","No",1,51.11,"XP_015840435.1:c.176G>A","XP_015840435.1:p.Arg59His","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[2179,"NW_015452199.1",1571,"SNV","T","A","Heterozygous",7,29,24.14,0.99,6,2,0.25,40.29,8,36,6,6,0.97,0.49,0.87,"no","A/T","No",1,21.08,"XP_015840435.1:c.189T>A","XP_015840435.1:p.Asn63Lys","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[2180,"NW_015452199.1",2097,"SNV","G","A","Heterozygous",11,28,39.29,1,1,11,0.08,40.18,12,29,7,6,1.15,0.21,0.34,"no","A/G","No",1,74.94,"XP_015840435.1:c.715G>A","XP_015840435.1:p.Glu239Lys","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[2181,"NW_015452204.1",9319,"Deletion","C","-","Heterozygous",5,23,21.74,0.93,0,5,0,38.8,5,26,4,5,-0.41,0.4,0.51,"no","-/C","No",1,11.85,"XP_008200556.2:c.731delG","XP_008200556.2:p.Arg244fs","LOC103314968",103314968,null,"103314968 [Gene Symbol: LOC103314968] [Locus Tag: TcasGA2_TC031593] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314968] [Gene Type: protein-coding]","LOC103314968; TcasGA2_TC031593"]
[2182,"NW_015452258.1",8743,"SNV","C","T","Heterozygous",13,38,34.21,1,13,0,0,39.46,13,42,5,9,1.98,0.05,0.44,"no","C/T","No",1,75.19,"XP_015840445.1:c.595G>A","XP_015840445.1:p.Val199Ile","LOC107399200",107399200,null,"107399200 [Gene Symbol: LOC107399200] [Locus Tag: TcasGA2_TC006958] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399200] [Gene Type: protein-coding]","TcasGA2_TC006958; LOC107399200"]
[2183,"NW_015452258.1",8761,"SNV","G","A","Heterozygous",7,32,21.88,0.95,7,2,0.22,37.43,9,41,4,4,0,0.2,0.88,"no","A/G","No",1,13.16,"XP_015840445.1:c.577C>T","XP_015840445.1:p.Leu193Phe","LOC107399200",107399200,null,"107399200 [Gene Symbol: LOC107399200] [Locus Tag: TcasGA2_TC006958] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399200] [Gene Type: protein-coding]","TcasGA2_TC006958; LOC107399200"]
[2184,"NW_015452258.1",8809,"SNV","C","G","Heterozygous",16,53,30.19,1,5,11,0.31,38.75,16,62,7,12,-0.21,0.9,0.83,"no","C/G","No",1,69.17,"XP_015840445.1:c.529G>C","XP_015840445.1:p.Asp177His","LOC107399200",107399200,null,"107399200 [Gene Symbol: LOC107399200] [Locus Tag: TcasGA2_TC006958] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399200] [Gene Type: protein-coding]","TcasGA2_TC006958; LOC107399200"]
[2185,"NW_015452265.1",8654,"SNV","C","T","Heterozygous",9,21,42.86,1,5,4,0.44,38.44,9,21,7,6,1.42,0.38,0.67,"no","C/T","No",1,68.83,"XP_015840446.1:c.2126C>T","XP_015840446.1:p.Thr709Met","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2186,"NW_015452265.1","8679..8680","MNV","TG","CA","Heterozygous",8,21,38.1,1,3,5,0.38,37.75,8,21,6,5,-1.2,0.9,0.96,"no","complex","No",1,200,"XP_015840446.1:c.2151_2152delTGinsCA","XP_015840446.1:p.Val718Ile","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2187,"NW_015452265.1",9083,"SNV","A","G","Heterozygous",7,24,29.17,1,7,0,0,39.57,7,25,4,7,-0.73,0.3,0.44,"no","A/G","No",1,36.15,"XP_015840446.1:c.2498A>G","XP_015840446.1:p.Glu833Gly","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2188,"NW_015452265.1",9227,"SNV","G","A","Homozygous",43,43,100,1,31,22,0.42,38.07,53,53,30,31,null,1,1,"no","A/A","No",1,149.55,"XP_015840446.1:c.2642G>A","XP_015840446.1:p.Cys881Tyr","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2189,"NW_015452265.1",9410,"SNV","C","T","Homozygous",20,20,100,1,12,10,0.45,37.5,22,22,12,15,null,1,1,"no","T/T","No",1,81.7,"XP_015840446.1:c.2825C>T","XP_015840446.1:p.Thr942Ile","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2190,"NW_015452265.1",9493,"SNV","A","C","Homozygous",26,26,100,1,13,20,0.39,38.46,33,33,18,20,null,1,1,"no","C/C","No",1,98.17,"XP_015840446.1:c.2908A>C","XP_015840446.1:p.Ile970Leu","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2191,"NW_015452265.1",9527,"SNV","A","G","Homozygous",26,26,100,1,12,17,0.41,38.85,29,29,19,21,null,1,1,"no","G/G","No",1,98.15,"XP_015840446.1:c.2942A>G","XP_015840446.1:p.Asp981Gly","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2192,"NW_015452265.1",10132,"SNV","G","A","Homozygous",17,21,80.95,0.81,11,8,0.42,38.59,19,23,14,12,0.09,0.97,1,"no","A/G","No",1,7.13,"XP_015840446.1:c.3547G>A","XP_015840446.1:p.Gly1183Ser","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2193,"NW_015452276.1",21074,"SNV","A","G","Homozygous",23,23,100,1,13,14,0.48,36.57,27,27,10,14,null,1,1,"no","G/G","No",1,89.11,"XP_008200193.1:c.236T>C","XP_008200193.1:p.Phe79Ser","LOC656477",656477,null,"656477 [Gene Symbol: LOC656477] [Locus Tag: TcasGA2_TC031122] [Chromosome: Un] [Map Location: ] [Description: puromycin-sensitive aminopeptidase-like protein] [Gene Type: protein-coding]","LOC656477; TcasGA2_TC031122"]
[2194,"NW_015452276.1",79152,"SNV","A","G","Homozygous",23,23,100,1,12,14,0.46,35.65,26,26,9,14,null,1,1,"no","G/G","No",1,89.11,"XP_968717.1:c.101T>C","XP_968717.1:p.Leu34Pro","LOC657148",657148,null,"657148 [Gene Symbol: LOC657148] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: sodium-dependent serotonin transporter] [Gene Type: protein-coding]","LOC657148"]
[2195,"NW_015452276.1",95654,"SNV","C","T","Homozygous",19,21,90.48,0.99,14,5,0.26,38.42,19,21,10,15,null,0.99,1,"no","T/T","No",1,21.54,"XP_968795.1:c.2238G>A","XP_968795.1:p.Met746Ile","LOC657231",657231,null,"657231 [Gene Symbol: LOC657231] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: neurofilament heavy polypeptide] [Gene Type: protein-coding]","LOC657231"]
[2196,"NW_015452276.1",123329,"SNV","G","A","Homozygous",20,20,100,1,12,10,0.45,36.5,22,22,10,12,null,1,1,"no","A/A","No",1,81.7,"XP_969008.2:c.7603G>A","XP_969008.2:p.Val2535Ile","LOC657455",657455,null,"657455 [Gene Symbol: LOC657455] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: small subunit processome component 20 homolog] [Gene Type: protein-coding]","LOC657455"]
[2197,"NW_015452276.1","162964..162966","Deletion","CTC","-","Heterozygous",14,20,70,1,10,4,0.29,34.21,14,20,10,9,-4.94,0.41,0.62,"no","complex","No",1,200,"XP_008200205.1:c.147_149delCTC","XP_008200205.1:p.Ser51del","LOC103314865",103314865,null,"103314865 [Gene Symbol: LOC103314865] [Locus Tag: TcasGA2_TC031753] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314865] [Gene Type: protein-coding]","LOC103314865; TcasGA2_TC031753"]
[2198,"NW_015452276.1",199593,"SNV","C","T","Heterozygous",10,20,50,1,4,9,0.31,39.3,13,25,6,5,0.6,0.54,0.76,"no","C/T","No",1,81.97,"XP_969156.2:c.728C>T","XP_969156.2:p.Ala243Val","LOC657612",657612,null,"657612 [Gene Symbol: LOC657612] [Locus Tag: TcasGA2_TC031757] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC657612] [Gene Type: protein-coding]","TcasGA2_TC031757; LOC657612"]
[2199,"NW_015452276.1",203149,"SNV","A","G","Heterozygous",17,28,60.71,1,11,9,0.45,37.12,20,31,9,11,1.36,0.78,0.99,"no","A/G","No",1,75.01,"XP_015840450.1:c.3436T>C","XP_015840450.1:p.Phe1146Leu","LOC100142253",100142253,null,"100142253 [Gene Symbol: LOC100142253] [Locus Tag: TcasGA2_TC002339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142253] [Gene Type: protein-coding]","TcasGA2_TC002339; LOC100142253"]
[2200,"NW_015452276.1",206472,"SNV","C","A","Heterozygous",13,20,65,1,8,10,0.44,35.46,18,25,8,10,-1.98,0.95,0.97,"no","A/C","No",1,46.99,"XP_015840450.1:c.2119G>T","XP_015840450.1:p.Glu707*","LOC100142253",100142253,null,"100142253 [Gene Symbol: LOC100142253] [Locus Tag: TcasGA2_TC002339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142253] [Gene Type: protein-coding]","TcasGA2_TC002339; LOC100142253"]
[2201,"NW_015452276.1",206600,"SNV","C","T","Heterozygous",20,40,50,1,9,16,0.36,37.4,25,45,10,12,0.65,0.96,0.99,"no","C/T","No",1,153.53,"XP_015840450.1:c.2041G>A","XP_015840450.1:p.Asp681Asn","LOC100142253",100142253,null,"100142253 [Gene Symbol: LOC100142253] [Locus Tag: TcasGA2_TC002339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142253] [Gene Type: protein-coding]","TcasGA2_TC002339; LOC100142253"]
[2202,"NW_015452276.1",208260,"SNV","A","G","Homozygous",22,22,100,1,14,13,0.48,37.82,27,27,17,18,null,1,1,"no","G/G","No",1,86.1,"XP_015840450.1:c.1094T>C","XP_015840450.1:p.Val365Ala","LOC100142253, LOC657929","100142253 , 657929",null,"100142253 [Gene Symbol: LOC100142253] [Locus Tag: TcasGA2_TC002339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142253] [Gene Type: protein-coding] || 657929 [Gene Symbol: LOC657929] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: xylosyltransferase oxt] [Gene Type: protein-coding]","TcasGA2_TC002339; LOC100142253 || LOC657929"]
[2203,"NW_015452276.1",227624,"SNV","A","T","Heterozygous",7,26,26.92,1,4,3,0.43,39,7,26,5,7,1.04,0.81,0.68,"no","A/T","No",1,29.57,"XP_008200220.1:c.[1175A>T]; XP_008200222.1:c.[1175A>T]; XP_015840457.1:c.[1175A>T]","XP_008200220.1:p.[Tyr392Phe]; XP_008200222.1:p.[Tyr392Phe]; XP_015840457.1:p.[Tyr392Phe]","LOC658083",658083,null,"658083 [Gene Symbol: LOC658083] [Locus Tag: TcasGA2_TC031758] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC658083] [Gene Type: protein-coding]","LOC658083; TcasGA2_TC031758"]
[2204,"NW_015452276.1",228094,"SNV","G","T","Heterozygous",18,26,69.23,1,14,8,0.36,38.06,22,30,9,14,0.58,0.99,1,"no","G/T","No",1,42.88,"XP_008200222.1:c.[1645G>T]; XP_008200220.1:c.[1645G>T]; XP_015840457.1:c.[1645G>T]","XP_008200222.1:p.[Val549Leu]; XP_008200220.1:p.[Val549Leu]; XP_015840457.1:p.[Val549Leu]","LOC658083",658083,null,"658083 [Gene Symbol: LOC658083] [Locus Tag: TcasGA2_TC031758] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC658083] [Gene Type: protein-coding]","LOC658083; TcasGA2_TC031758"]
[2205,"NC_003081.2",686,"SNV","G","A","Homozygous",1872,1874,99.89,1,1010,1136,0.47,39.49,2146,2148,186,166,null,1,1,"no","A/A","No",1,200,"NP_203156.1:c.484G>A","NP_203156.1:p.Gly162Arg","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[2206,"NC_003081.2",807,"SNV","G","C","Homozygous",1828,1829,99.95,1,1015,1068,0.49,39.06,2083,2084,187,156,null,1,1,"no","C/C","No",1,200,"NP_203156.1:c.605G>C","NP_203156.1:p.*202Ser","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[2207,"NC_003081.2",925,"SNV","G","C","Homozygous",1922,1922,100,1,1182,1008,0.46,38.89,2190,2190,185,168,null,1,1,"no","C/C","No",1,200,"NP_203156.1:c.723G>C","NP_203156.1:p.Leu241Phe","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[2208,"NC_003081.2",2381,"SNV","G","C","Homozygous",2275,2277,99.91,1,1277,1300,0.5,39.07,2577,2579,186,168,null,1,1,"no","C/C","No",1,200,"NP_258414.1:c.987G>C","NP_258414.1:p.Gln329His","COX1",803829,null,"803829 [Gene Symbol: COX1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome c oxidase subunit I] [Gene Type: protein-coding]","COX1"]
[2209,"NC_003081.2","3997^3998","Insertion","-","AAC","Homozygous",1864,1871,99.63,1,1011,1099,0.48,39.02,2110,2119,185,170,1.81,1,1,"no","AAC/AAC","No",1,200,"NP_203158.1:c.134_135insAAC","NP_203158.1:p.Thr46_Ile47insThr","ATP8",803827,null,"803827 [Gene Symbol: ATP8] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: ATP synthase F0 subunit 8] [Gene Type: protein-coding]","ATP8"]
[2210,"NC_003081.2",4930,"SNV","A","G","Homozygous",2148,2149,99.95,1,1124,1290,0.47,38.73,2414,2416,183,165,null,1,1,"no","G/G","No",1,200,"NP_203160.2:c.247A>G","NP_203160.2:p.Ile83Val","COX3",803825,null,"803825 [Gene Symbol: COX3] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome c oxidase subunit III] [Gene Type: protein-coding]","COX3"]
[2211,"NC_003081.2","5591^5592","Insertion","-","T","Homozygous",1916,1917,99.95,1,1136,1028,0.48,38.16,2164,2165,182,162,null,1,1,"no","T/T","No",1,200,"NP_203161.1:c.65_66insT","NP_203161.1:p.*22fs","ND3",803821,null,"803821 [Gene Symbol: ND3] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 3] [Gene Type: protein-coding]","ND3"]
[2212,"NC_003081.2",6515,"SNV","C","T","Homozygous",1890,1890,100,1,1058,1067,0.5,38.74,2125,2125,182,171,null,1,1,"no","T/T","No",1,200,"NP_203162.1:c.1462G>A","NP_203162.1:p.Gly488Arg","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[2213,"NC_003081.2",6956,"SNV","T","A","Homozygous",2005,2005,100,1,1123,1139,0.5,38.61,2262,2262,186,165,null,1,1,"no","A/A","No",1,200,"NP_203162.1:c.1021A>T","NP_203162.1:p.Asn341Tyr","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[2214,"NC_003081.2",7444,"SNV","G","A","Homozygous",2033,2034,99.95,1,1077,1208,0.47,39.09,2285,2286,186,179,null,1,1,"no","A/A","No",1,200,"NP_203162.1:c.533C>T","NP_203162.1:p.Ser178Phe","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[2215,"NC_003081.2",8651,"SNV","C","T","Homozygous",1931,1932,99.95,1,1032,1150,0.47,37.84,2182,2183,188,172,null,1,1,"no","T/T","No",1,200,"NP_203163.1:c.721G>A","NP_203163.1:p.Ala241Thr","ND4",803822,null,"803822 [Gene Symbol: ND4] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 4] [Gene Type: protein-coding]","ND4"]
[2216,"NC_003081.2",11283,"SNV","C","T","Homozygous",2110,2111,99.95,1,1102,1253,0.47,39,2355,2356,184,170,null,1,1,"no","T/T","No",1,200,"NP_203166.1:c.1004C>T","NP_203166.1:p.Pro335Leu","CYTB",803817,null,"803817 [Gene Symbol: CYTB] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome b] [Gene Type: protein-coding]","CYTB"]
[2217,"NC_003081.2",11571,"SNV","A","G","Homozygous",1880,1880,100,1,1129,1009,0.47,38.41,2138,2138,183,166,null,1,1,"no","G/G","No",1,200,"NP_203167.1:c.886T>C","NP_203167.1:p.Ser296Pro","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[2218,"NC_003081.2",11787,"SNV","C","T","Homozygous",2071,2071,100,1,1210,1134,0.48,38.65,2344,2344,180,168,null,1,1,"no","T/T","No",1,200,"NP_203167.1:c.670G>A","NP_203167.1:p.Gly224Arg","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[2219,"NC_003081.2",11874,"SNV","C","T","Homozygous",2075,2075,100,1,1070,1293,0.45,38.55,2363,2363,188,169,null,1,1,"no","T/T","No",1,200,"NP_203167.1:c.583G>A","NP_203167.1:p.Val195Ile","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[2220,"NC_003081.2",12188,"SNV","G","A","Homozygous",1931,1932,99.95,1,1049,1158,0.48,38.82,2207,2208,187,167,null,1,1,"no","A/A","No",1,200,"NP_203167.1:c.269C>T","NP_203167.1:p.Ala90Val","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]

{"sheet":"S","index":1,"n_rows":1801,"n_cols":34,"rows_kept":1801}
["#","Chromosome","Region","Type","Reference","Allele","Zygosity","Count","Coverage","Frequency","Probability","Forward read count","Reverse read count","Forward/reverse balance","Average quality","Read count","Read coverage","# unique start positions","# unique end positions","BaseQRankSum","Read position test probability","Read direction test probability","Hyper-allelic","Genotype","Homopolymer","Homopolymer length","QUAL","Coding region change","Amino acid change","GCF_000002335.3_Tcas5.2_genomic_Gene","GeneID","description (GCF_000002335.3_Tcas5.2_genomic_Gene)","NCBI GENE description","NCBI GENE symbol"]
[1,"NC_007416.3",221070,"SNV","G","A","Heterozygous",10,20,50,1,5,9,0.36,36.7,14,25,6,6,2.23,0.38,0.51,"no","A/G","No",1,82.45,"XP_008198367.1:c.[293C>T]; XP_975863.1:c.[293C>T]","XP_008198367.1:p.[Ala98Val]; XP_975863.1:p.[Ala98Val]","LOC654960",654960,null,"654960 [Gene Symbol: LOC654960] [Locus Tag: TcasGA2_TC004686] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC654960] [Gene Type: protein-coding]","LOC654960; TcasGA2_TC004686"]
[2,"NC_007416.3",309251,"SNV","G","C","Homozygous",39,39,100,1,28,14,0.33,36.92,42,42,11,23,null,1,1,"no","C/C","No",1,138.12,"XP_015835038.1:c.3470C>G","XP_015835038.1:p.Pro1157Arg","LOC657847",657847,null,"657847 [Gene Symbol: LOC657847] [Locus Tag: TcasGA2_TC034516] [Chromosome: LGX] [Map Location: ] [Description: latrophilin Cirl] [Gene Type: protein-coding]","TcasGA2_TC034516; LOC657847"]
[3,"NC_007416.3",309299,"SNV","G","C","Homozygous",22,22,100,1,9,19,0.32,34.82,28,28,8,8,null,1,1,"no","C/C","No",1,86.9,"XP_015835038.1:c.3422C>G","XP_015835038.1:p.Ala1141Gly","LOC657847",657847,null,"657847 [Gene Symbol: LOC657847] [Locus Tag: TcasGA2_TC034516] [Chromosome: LGX] [Map Location: ] [Description: latrophilin Cirl] [Gene Type: protein-coding]","TcasGA2_TC034516; LOC657847"]
[4,"NC_007416.3",533651,"SNV","A","T","Homozygous",21,21,100,1,18,3,0.14,38.33,21,21,5,15,null,1,1,"no","T/T","No",1,85.53,"XP_008200364.2:c.1538T>A","XP_008200364.2:p.Ile513Lys","LOC658322",658322,null,"658322 [Gene Symbol: LOC658322] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC658322] [Gene Type: protein-coding]","LOC658322"]
[5,"NC_007416.3","533655..533656","MNV","AA","TC","Homozygous",22,22,100,1,18,4,0.18,37.42,22,22,6,16,null,1,1,"no","TC/TC","No",1,200,"XP_008200364.2:c.1533_1534delTTinsGA","XP_008200364.2:p.Ser512Thr","LOC658322",658322,null,"658322 [Gene Symbol: LOC658322] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC658322] [Gene Type: protein-coding]","LOC658322"]
[6,"NC_007416.3",533712,"SNV","A","C","Homozygous",30,30,100,1,20,13,0.39,38.33,33,33,6,20,null,1,1,"no","C/C","No",1,110.98,"XP_008200364.2:c.1477T>G","XP_008200364.2:p.Cys493Gly","LOC658322",658322,null,"658322 [Gene Symbol: LOC658322] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC658322] [Gene Type: protein-coding]","LOC658322"]
[7,"NC_007416.3","850927..850928","MNV","AA","TG","Homozygous",17,20,85,1,8,9,0.47,39.5,17,20,10,10,null,0.94,0.99,"no","TG/TG","No",1,200,"XP_008190747.1:c.[746_747delTTinsCA]; XP_008190748.1:c.[746_747delTTinsCA]; XP_008190746.1:c.[746_747delTTinsCA]","XP_008190747.1:p.[Ile249Thr]; XP_008190748.1:p.[Ile249Thr]; XP_008190746.1:p.[Ile249Thr]","LOC659434",659434,null,"659434 [Gene Symbol: LOC659434] [Locus Tag: TcasGA2_TC004713] [Chromosome: LGX] [Map Location: ] [Description: fibroblast growth factor receptor homolog 1] [Gene Type: protein-coding]","htl; DFR1; heartless; LOC659434; TcasGA2_TC004713"]
[8,"NC_007416.3",884448,"SNV","C","G","Homozygous",28,28,100,1,21,11,0.34,35.75,32,32,9,15,null,1,1,"no","G/G","No",1,104.95,"XP_015834664.1:c.[632G>C]; XP_015834659.1:c.[632G>C]","XP_015834664.1:p.[Ser211Thr]; XP_015834659.1:p.[Ser211Thr]","LOC103312276",103312276,null,"103312276 [Gene Symbol: LOC103312276] [Locus Tag: TcasGA2_TC004711] [Chromosome: LGX] [Map Location: ] [Description: major facilitator superfamily domain-containing protein 6] [Gene Type: protein-coding]","LOC103312276; TcasGA2_TC004711"]
[9,"NC_007416.3",1214862,"SNV","C","A","Heterozygous",8,20,40,1,8,0,0,41,8,23,3,6,1.54,0.54,0.63,"no","A/C","No",1,54.64,"XP_008200255.1:c.[131C>A]; XP_008200254.1:c.[131C>A]","XP_008200255.1:p.[Ser44*]; XP_008200254.1:p.[Ser44*]","LOC660909",660909,null,"660909 [Gene Symbol: LOC660909] [Locus Tag: TcasGA2_TC001602] [Chromosome: LGX] [Map Location: ] [Description: protein bunched, class 2/F/G isoform] [Gene Type: protein-coding]","bun; TcasGA2_TC001602; LOC660909; bunched"]
[10,"NC_007416.3",1214931,"SNV","C","A","Heterozygous",8,23,34.78,1,4,8,0.33,41,12,30,1,1,3.1,0.06,0.78,"no","A/C","No",1,46.23,"XP_008200254.1:c.[200C>A]; XP_008200255.1:c.[200C>A]","XP_008200254.1:p.[Thr67Lys]; XP_008200255.1:p.[Thr67Lys]","LOC660909",660909,null,"660909 [Gene Symbol: LOC660909] [Locus Tag: TcasGA2_TC001602] [Chromosome: LGX] [Map Location: ] [Description: protein bunched, class 2/F/G isoform] [Gene Type: protein-coding]","bun; TcasGA2_TC001602; LOC660909; bunched"]
[11,"NC_007416.3",1244148,"SNV","C","T","Homozygous",20,20,100,1,12,15,0.44,37.7,27,27,7,13,null,1,1,"no","T/T","No",1,82.52,"XP_008200248.1:c.[1264G>A]; XP_001813427.1:c.[1264G>A]; XP_015835145.1:c.[1264G>A]","XP_008200248.1:p.[Glu422Lys]; XP_001813427.1:p.[Glu422Lys]; XP_015835145.1:p.[Glu422Lys]","LOC100142250",100142250,null,"100142250 [Gene Symbol: LOC100142250] [Locus Tag: TcasGA2_TC001632] [Chromosome: LGX] [Map Location: ] [Description: pro-interleukin-16] [Gene Type: protein-coding]","LOC100142250; TcasGA2_TC001632"]
[12,"NC_007416.3",1244169,"SNV","C","A","Heterozygous",6,26,23.08,0.95,0,6,0,37,6,29,1,1,-1.25,0.28,0.11,"no","A/C","No",1,12.66,"XP_015835145.1:c.[1243G>T]; XP_008200248.1:c.[1243G>T]; XP_001813427.1:c.[1243G>T]","XP_015835145.1:p.[Ala415Ser]; XP_008200248.1:p.[Ala415Ser]; XP_001813427.1:p.[Ala415Ser]","LOC100142250",100142250,null,"100142250 [Gene Symbol: LOC100142250] [Locus Tag: TcasGA2_TC001632] [Chromosome: LGX] [Map Location: ] [Description: pro-interleukin-16] [Gene Type: protein-coding]","LOC100142250; TcasGA2_TC001632"]
[13,"NC_007416.3",1256986,"SNV","C","A","Heterozygous",5,20,25,0.98,0,5,0,34,5,22,1,1,-2.05,0.13,0.74,"no","A/C","No",1,16.47,"XP_015835132.1:c.[3500C>A]; XP_015835135.1:c.[3491C>A]","XP_015835132.1:p.[Ala1167Glu]; XP_015835135.1:p.[Ala1164Glu]","LOC103314876",103314876,null,"103314876 [Gene Symbol: LOC103314876] [Locus Tag: TcasGA2_TC001604] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314876] [Gene Type: protein-coding]","TcasGA2_TC001604; LOC103314876"]
[14,"NC_007416.3",1281111,"SNV","A","T","Homozygous",22,22,100,1,10,13,0.43,40.23,23,23,8,11,null,1,1,"no","T/T","No",1,88.53,"XP_015835095.1:c.[21T>A]; XP_971662.1:c.[21T>A]; XP_015835098.1:c.[21T>A]","XP_015835095.1:p.[Asn7Lys]; XP_971662.1:p.[Asn7Lys]; XP_015835098.1:p.[Asn7Lys]","LOC660326",660326,null,"660326 [Gene Symbol: LOC660326] [Locus Tag: TcasGA2_TC001629] [Chromosome: LGX] [Map Location: ] [Description: glutaryl-CoA dehydrogenase, mitochondrial] [Gene Type: protein-coding]","LOC660326; TcasGA2_TC001629"]
[15,"NC_007416.3",1315061,"SNV","T","C","Homozygous",23,23,100,1,11,13,0.46,36.3,24,24,14,12,null,1,1,"no","C/C","No",1,89.89,"XP_008200242.1:c.[151+235T>C]; XP_015835407.1:c.[2030A>G]","XP_015835407.1:p.Asn677Ser","LOC659752, LOC103314874","659752 , 103314874",null,"659752 [Gene Symbol: LOC659752] [Locus Tag: TcasGA2_TC001611] [Chromosome: LGX] [Map Location: ] [Description: SEC23-interacting protein] [Gene Type: protein-coding] || 103314874 [Gene Symbol: LOC103314874] [Locus Tag: TcasGA2_TC001625] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314874] [Gene Type: protein-coding]","TcasGA2_TC001611; LOC659752 || LOC103314874; TcasGA2_TC001625"]
[16,"NC_007416.3","1343015..1343016","MNV","TA","CT","Homozygous",21,21,100,1,8,18,0.31,36.8,26,26,12,13,null,1,1,"no","CT/CT","No",1,200,"XP_015833675.1:c.[319_320delTAinsCT]; XP_015833668.1:c.[598_599delTAinsCT]; XP_015833664.1:c.[598_599delTAinsCT]; XP_015833672.1:c.[598_599delTAinsCT]; XP_015833671.1:c.[598_599delTAinsCT]","XP_015833675.1:p.[Tyr107Leu]; XP_015833668.1:p.[Tyr200Leu]; XP_015833664.1:p.[Tyr200Leu]; XP_015833672.1:p.[Tyr200Leu]; XP_015833671.1:p.[Tyr200Leu]","LOC100141915",100141915,null,"100141915 [Gene Symbol: LOC100141915] [Locus Tag: TcasGA2_TC001615] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC100141915] [Gene Type: protein-coding]","LOC100141915; TcasGA2_TC001615"]
[17,"NC_007416.3",1438953,"SNV","A","C","Homozygous",25,25,100,1,12,13,0.48,39.28,25,25,10,15,null,1,1,"no","C/C","No",1,95.93,"XP_001807209.1:c.235A>C","XP_001807209.1:p.Thr79Pro","LOC100141737",100141737,null,"100141737 [Gene Symbol: LOC100141737] [Locus Tag: TcasGA2_TC004134] [Chromosome: LGX] [Map Location: ] [Description: kinesin-like protein KIF11-A] [Gene Type: protein-coding]","TcasGA2_TC004134; LOC100141737"]
[18,"NC_007416.3",1440290,"SNV","G","C","Homozygous",21,21,100,1,8,13,0.38,37.86,21,21,6,9,null,1,1,"no","C/C","No",1,83.89,"XP_001807209.1:c.1477G>C","XP_001807209.1:p.Ala493Pro","LOC100141737",100141737,null,"100141737 [Gene Symbol: LOC100141737] [Locus Tag: TcasGA2_TC004134] [Chromosome: LGX] [Map Location: ] [Description: kinesin-like protein KIF11-A] [Gene Type: protein-coding]","TcasGA2_TC004134; LOC100141737"]
[19,"NC_007416.3",2790154,"SNV","T","C","Homozygous",20,20,100,1,14,12,0.46,38.7,26,26,8,11,null,1,1,"no","C/C","No",1,80.88,"XP_966896.1:c.499T>C","XP_966896.1:p.Phe167Leu","LOC655274",655274,null,"655274 [Gene Symbol: LOC655274] [Locus Tag: TcasGA2_TC014174] [Chromosome: LGX] [Map Location: ] [Description: U3 small nucleolar RNA-interacting protein 2] [Gene Type: protein-coding]","LOC655274; TcasGA2_TC014174"]
[20,"NC_007416.3",2794607,"SNV","T","C","Homozygous",23,23,100,1,9,14,0.39,37.13,23,23,7,13,null,1,1,"no","C/C","No",1,89.9,"XP_966993.2:c.781A>G","XP_966993.2:p.Ile261Val","LOC655360",655360,null,"655360 [Gene Symbol: LOC655360] [Locus Tag: TcasGA2_TC013635] [Chromosome: LGX] [Map Location: ] [Description: fibrillin-1] [Gene Type: protein-coding]","TcasGA2_TC013635; LOC655360"]
[21,"NC_007416.3",2850060,"SNV","C","A","Homozygous",35,35,100,1,20,16,0.44,39.17,36,36,15,17,null,1,1,"no","A/A","No",1,127.62,"NP_001153720.1:c.1704C>A","NP_001153720.1:p.Asn568Lys","Sema-1a",656016,"semaphorin-1a","656016 [Gene Symbol: Sema-1a] [Locus Tag: TcasGA2_TC014179] [Chromosome: LGX] [Map Location: ] [Description: semaphorin-1a] [Gene Type: protein-coding]","TcasGA2_TC014179; Sema-1a"]
[22,"NC_007416.3",2943584,"SNV","C","G","Homozygous",31,31,100,1,27,4,0.13,35.45,31,31,7,22,null,1,1,"no","G/G","No",1,113.97,"XP_968749.2:c.[1038G>C]; XP_008193404.1:c.[1035G>C]","XP_968749.2:p.[Glu346Asp]; XP_008193404.1:p.[Glu345Asp]","LOC657185",657185,null,"657185 [Gene Symbol: LOC657185] [Locus Tag: TcasGA2_TC013625] [Chromosome: LGX] [Map Location: ] [Description: ralA-binding protein 1] [Gene Type: protein-coding]","LOC657185; TcasGA2_TC013625"]
[23,"NC_007416.3",3137613,"SNV","C","T","Homozygous",22,22,100,1,10,16,0.38,38.14,26,26,6,8,null,1,1,"no","T/T","No",1,88.53,"XP_008193417.2:c.3487G>A","XP_008193417.2:p.Val1163Ile","LOC658869",658869,null,"658869 [Gene Symbol: LOC658869] [Locus Tag: ] [Chromosome: LGX] [Map Location: LGX|LGX] [Description: ras-specific guanine nucleotide-releasing factor 2-like] [Gene Type: protein-coding]","LOC658869"]
[24,"NC_007416.3",3249938,"SNV","A","G","Homozygous",29,29,100,1,14,15,0.48,39.21,29,29,6,16,null,1,1,"no","G/G","No",1,107.96,"XP_971522.3:c.226T>C","XP_971522.3:p.Ser76Pro","LOC660174",660174,null,"660174 [Gene Symbol: LOC660174] [Locus Tag: TcasGA2_TC013601] [Chromosome: LGX] [Map Location: ] [Description: probable DNA mismatch repair protein Msh6] [Gene Type: protein-coding]","LOC660174; TcasGA2_TC013601"]
[25,"NC_007416.3",3284476,"Deletion","G","-","Heterozygous",6,21,28.57,1,6,0,0,37.17,6,21,1,5,1.75,0.03,0.11,"no","-/G","No",1,29.82,"XP_971800.2:c.[642delC]; XP_008193435.1:c.[708delC]","XP_971800.2:p.[Lys215fs]; XP_008193435.1:p.[Lys237fs]","LOC660479",660479,null,"660479 [Gene Symbol: LOC660479] [Locus Tag: TcasGA2_TC030882] [Chromosome: LGX] [Map Location: ] [Description: arginine kinase] [Gene Type: protein-coding]","LOC660479; TcasGA2_TC030882"]
[26,"NC_007416.3",3424196,"SNV","G","C","Homozygous",30,30,100,1,17,17,0.5,38.23,34,34,11,20,null,1,1,"no","C/C","No",1,110.97,"XP_015833030.1:c.[27C>G]; XP_015833018.1:c.[27C>G]; XP_015833022.1:c.[27C>G]; XP_015833044.1:c.[27C>G]; XP_015833036.1:c.[27C>G]; XP_015833025.1:c.[27C>G]","XP_015833030.1:p.[His9Gln]; XP_015833018.1:p.[His9Gln]; XP_015833022.1:p.[His9Gln]; XP_015833044.1:p.[His9Gln]; XP_015833036.1:p.[His9Gln]; XP_015833025.1:p.[His9Gln]","LOC100141527",100141527,null,"100141527 [Gene Symbol: LOC100141527] [Locus Tag: TcasGA2_TC013586] [Chromosome: LGX] [Map Location: ] [Description: trithorax group protein osa] [Gene Type: protein-coding]","TcasGA2_TC013586; LOC100141527"]
[27,"NC_007416.3",3483706,"SNV","C","A","Heterozygous",5,20,25,0.98,0,5,0,37.8,5,20,1,1,0.7,0.26,0.9,"no","A/C","No",1,16.45,"XP_008193469.1:c.[3421C>A]; XP_015833763.1:c.[3421C>A]; XP_008193470.1:c.[3421C>A]; XP_008193471.1:c.[3421C>A]; XP_015833754.1:c.[3421C>A]","XP_008193469.1:p.[Pro1141Thr]; XP_015833763.1:p.[Pro1141Thr]; XP_008193470.1:p.[Pro1141Thr]; XP_008193471.1:p.[Pro1141Thr]; XP_015833754.1:p.[Pro1141Thr]","LOC661047",661047,null,"661047 [Gene Symbol: LOC661047] [Locus Tag: TcasGA2_TC014226] [Chromosome: LGX] [Map Location: ] [Description: kinesin 3A] [Gene Type: protein-coding]","TcasGA2_TC014226; kinesin-3A; LOC661047"]
[28,"NC_007416.3",3503198,"SNV","C","A","Heterozygous",10,23,43.48,1,10,6,0.38,40,16,30,5,5,1.36,0.19,1,"no","A/C","No",1,71.81,"XP_015839069.1:c.148C>A","XP_015839069.1:p.Gln50Lys","LOC660272",660272,null,"660272 [Gene Symbol: LOC660272] [Locus Tag: TcasGA2_TC014229] [Chromosome: LGX] [Map Location: ] [Description: trans-1,2-dihydrobenzene-1,2-diol dehydrogenase] [Gene Type: protein-coding]","LOC660272; TcasGA2_TC014229"]
[29,"NC_007416.3",3577832,"SNV","T","A","Heterozygous",5,20,25,0.99,0,5,0,41,5,22,1,1,2.62,0.03,0.09,"no","A/T","No",1,21.02,"NP_001306946.1:c.548A>T","NP_001306946.1:p.Tyr183Phe","LOC103313043",103313043,"protein scarlet-like","103313043 [Gene Symbol: LOC103313043] [Locus Tag: TcasGA2_TC031512] [Chromosome: LGX] [Map Location: ] [Description: protein scarlet-like] [Gene Type: protein-coding]","LOC103313043; brown; TcasGA2_TC031512"]
[30,"NC_007416.3",3758965,"SNV","C","G","Heterozygous",23,34,67.65,1,11,18,0.38,35,29,41,6,11,0.61,0.88,1,"no","C/G","No",1,59.18,"XP_015839131.1:c.1671G>C","XP_015839131.1:p.Glu557Asp","LOC655313",655313,null,"655313 [Gene Symbol: LOC655313] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: semaphorin-5A] [Gene Type: protein-coding]","Sema-5c; LOC655313"]
[31,"NC_007416.3",3772354,"SNV","A","T","Homozygous",32,32,100,1,18,18,0.5,34.06,36,36,17,15,null,1,1,"no","T/T","No",1,118.62,"XP_015836029.1:c.[1498T>A]; XP_015836031.1:c.[1441T>A]","XP_015836029.1:p.[Ser500Thr]; XP_015836031.1:p.[Ser481Thr]","LOC655476",655476,null,"655476 [Gene Symbol: LOC655476] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: protein trachealess] [Gene Type: protein-coding]","LOC655476; Trh"]
[32,"NC_007416.3",3847955,"SNV","C","T","Homozygous",23,23,100,1,13,13,0.5,36.96,26,26,9,14,null,1,1,"no","T/T","No",1,91.55,"XP_008199865.1:c.688G>A","XP_008199865.1:p.Ala230Thr","LOC655974",655974,null,"655974 [Gene Symbol: LOC655974] [Locus Tag: TcasGA2_TC034520] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC655974] [Gene Type: protein-coding]","LOC655974; TcasGA2_TC034520"]
[33,"NC_007416.3",3877254,"SNV","G","A","Homozygous",27,27,100,1,21,8,0.28,38.15,29,29,11,16,null,1,1,"no","A/A","No",1,103.55,"XP_008199830.1:c.[430G>A]; XP_015836742.1:c.[430G>A]; XP_008199829.1:c.[430G>A]","XP_008199830.1:p.[Ala144Thr]; XP_015836742.1:p.[Ala144Thr]; XP_008199829.1:p.[Ala144Thr]","LOC103314770",103314770,null,"103314770 [Gene Symbol: LOC103314770] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: lymphoid-specific helicase-like] [Gene Type: protein-coding]","LOC103314770"]
[34,"NC_007416.3",3904550,"SNV","T","C","Heterozygous",16,29,55.17,1,4,12,0.25,38.38,16,32,6,7,0.42,0.29,0.31,"no","C/T","No",1,97.97,"XP_008199839.1:c.938A>G","XP_008199839.1:p.Lys313Arg","LOC656636",656636,null,"656636 [Gene Symbol: LOC656636] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: adenosylhomocysteinase 2-like] [Gene Type: protein-coding]","LOC656636"]
[35,"NC_007416.3","3906852^3906853","Insertion","-","AG","Heterozygous",11,20,55,1,11,0,0,38.41,11,23,5,9,1.74,0.18,0.33,"no","complex","No",1,200,"XP_008199838.1:c.[8_9insAG]; XP_015840526.1:c.[8_9insAG]","XP_008199838.1:p.[Val4fs]; XP_015840526.1:p.[Val4fs]","LOC656803",656803,null,"656803 [Gene Symbol: LOC656803] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: eukaryotic translation initiation factor 2D] [Gene Type: protein-coding]","LOC656803"]
[36,"NC_007416.3",3907160,"SNV","C","G","Heterozygous",15,24,62.5,1,13,5,0.28,35.93,18,27,6,7,-0.95,0.86,0.99,"no","C/G","No",1,61.56,"XP_008199838.1:c.[267C>G]; XP_015840526.1:c.[267C>G]","XP_008199838.1:p.[Ile89Met]; XP_015840526.1:p.[Ile89Met]","LOC656803",656803,null,"656803 [Gene Symbol: LOC656803] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: eukaryotic translation initiation factor 2D] [Gene Type: protein-coding]","LOC656803"]
[37,"NC_007416.3",3916303,"SNV","C","A","Heterozygous",6,25,24,0.97,6,5,0.45,35.5,11,34,2,2,-1.37,0.15,1,"no","A/C","No",1,15.29,"XP_015840500.1:c.[2129C>A]; XP_008199843.1:c.[2129C>A]; XP_968711.3:c.[2129C>A]; XP_008199841.1:c.[2255C>A]; XP_008199844.1:c.[2027C>A]; XP_015840510.1:c.[2129C>A]; XP_008199842.1:c.[2129C>A]; XP_015840507.1:c.[2129C>A]; XP_008199840.1:c.[2255C>A]","XP_015840500.1:p.[Thr710Asn]; XP_008199843.1:p.[Thr710Asn]; XP_968711.3:p.[Thr710Asn]; XP_008199841.1:p.[Thr752Asn]; XP_008199844.1:p.[Thr676Asn]; XP_015840510.1:p.[Thr710Asn]; XP_008199842.1:p.[Thr710Asn]; XP_015840507.1:p.[Thr710Asn]; XP_008199840.1:p.[Thr752Asn]","LOC100141625",100141625,null,"100141625 [Gene Symbol: LOC100141625] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: catenin delta-2] [Gene Type: protein-coding]","LOC100141625"]
[38,"NC_007416.3",4135351,"SNV","A","T","Homozygous",24,24,100,1,13,15,0.46,36.58,28,28,10,16,null,1,1,"no","T/T","No",1,94.56,"XP_008200618.1:c.360T>A","XP_008200618.1:p.Asp120Glu","LOC654848",654848,null,"654848 [Gene Symbol: LOC654848] [Locus Tag: TcasGA2_TC004732] [Chromosome: LGX] [Map Location: ] [Description: UMP-CMP kinase] [Gene Type: protein-coding]","LOC654848; TcasGA2_TC004732"]
[39,"NC_007416.3","4260610..4260611","MNV","AC","GT","Heterozygous",13,20,65,1,3,12,0.2,38.92,15,22,6,7,0.63,0.51,0.42,"no","complex","No",1,200,"XP_015835194.1:c.[60_61delACinsGT]; XP_015835189.1:c.[60_61delACinsGT]; XP_015835193.1:c.[60_61delACinsGT]; XP_015835191.1:c.[60_61delACinsGT]","XP_015835194.1:p.[Leu21Phe]; XP_015835189.1:p.[Leu21Phe]; XP_015835193.1:p.[Leu21Phe]; XP_015835191.1:p.[Leu21Phe]","LOC660695",660695,null,"660695 [Gene Symbol: LOC660695] [Locus Tag: TcasGA2_TC004638] [Chromosome: LGX] [Map Location: ] [Description: tsukushin] [Gene Type: protein-coding]","LOC660695; TcasGA2_TC004638"]
[40,"NC_007416.3",4304596,"SNV","C","G","Homozygous",20,20,100,1,15,5,0.25,36.9,20,20,12,12,null,1,1,"no","G/G","No",1,80.88,"XP_015834637.1:c.6253C>G","XP_015834637.1:p.Pro2085Ala","LOC660397",660397,null,"660397 [Gene Symbol: LOC660397] [Locus Tag: TcasGA2_TC004642] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC660397] [Gene Type: protein-coding]","LOC660397; TcasGA2_TC004642"]
[41,"NC_007416.3",4994738,"SNV","C","T","Heterozygous",9,28,32.14,1,5,6,0.45,35.22,11,32,7,4,-4.13,0.08,1,"no","C/T","No",1,39.84,"XP_973584.1:c.1555C>T","XP_973584.1:p.Pro519Ser","LOC662393",662393,null,"662393 [Gene Symbol: LOC662393] [Locus Tag: TcasGA2_TC010772] [Chromosome: LGX] [Map Location: ] [Description: isoleucine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC662393; TcasGA2_TC010772"]
[42,"NC_007416.3",5055155,"SNV","G","T","Heterozygous",6,22,27.27,1,4,5,0.44,37.67,9,37,2,2,-0.44,0.2,0.95,"no","G/T","No",1,23.39,"XP_008199434.1:c.[811C>A]; XP_015840588.1:c.[919C>A]; XP_008199436.1:c.[662-458C>A]; XP_973314.1:c.[682+129C>A]; XP_008199431.1:c.[919C>A]; XP_008199432.1:c.[919C>A]; XP_015840581.1:c.[829C>A]; XP_008199435.1:c.[790+129C>A]","XP_008199434.1:p.[Arg271Ser]; XP_015840588.1:p.[Arg307Ser]; XP_008199431.1:p.[Arg307Ser]; XP_008199432.1:p.[Arg307Ser]; XP_015840581.1:p.[Arg277Ser]","LOC662102",662102,null,"662102 [Gene Symbol: LOC662102] [Locus Tag: TcasGA2_TC010873] [Chromosome: LGX] [Map Location: ] [Description: ensconsin] [Gene Type: protein-coding]","TcasGA2_TC010873; LOC662102"]
[43,"NC_007416.3",5379331,"SNV","C","T","Homozygous",21,21,100,1,13,13,0.5,37.62,26,26,12,14,null,1,1,"no","T/T","No",1,85.53,"XP_008199409.1:c.[146C>T]; XP_015836754.1:c.[146C>T]; XP_015836756.1:c.[17C>T]; XP_972399.1:c.[146C>T]","XP_008199409.1:p.[Thr49Ile]; XP_015836754.1:p.[Thr49Ile]; XP_015836756.1:p.[Thr6Ile]; XP_972399.1:p.[Thr49Ile]","LOC661124",661124,null,"661124 [Gene Symbol: LOC661124] [Locus Tag: TcasGA2_TC010789] [Chromosome: LGX] [Map Location: ] [Description: lachesin] [Gene Type: protein-coding]","LOC661124; TcasGA2_TC010789"]
[44,"NC_007416.3",5536755,"SNV","G","A","Homozygous",29,29,100,1,15,20,0.43,36.69,35,35,12,16,null,1,1,"no","A/A","No",1,106.57,"XP_971938.1:c.3737C>T","XP_971938.1:p.Thr1246Ile","LOC660629",660629,null,"660629 [Gene Symbol: LOC660629] [Locus Tag: TcasGA2_TC010852] [Chromosome: LGX] [Map Location: ] [Description: trafficking protein particle complex subunit 8] [Gene Type: protein-coding]","TcasGA2_TC010852; LOC660629"]
[45,"NC_007416.3",5849841,"SNV","A","G","Homozygous",18,21,85.71,0.74,13,9,0.41,36.33,22,25,10,9,null,0.93,1,"no","G/G","No",1,5.86,"XP_015839288.1:c.8137A>G","XP_015839288.1:p.Ser2713Gly","LOC659419",659419,null,"659419 [Gene Symbol: LOC659419] [Locus Tag: TcasGA2_TC010801] [Chromosome: LGX] [Map Location: ] [Description: dynein heavy chain 7, axonemal] [Gene Type: protein-coding]","LOC659419; TcasGA2_TC010801"]
[46,"NC_007416.3",5849875,"SNV","G","C","Homozygous",20,23,86.96,0.95,9,16,0.36,37.45,25,28,10,9,null,0.8,0.99,"no","C/C","No",1,12.82,"XP_015839288.1:c.8171G>C","XP_015839288.1:p.Ser2724Thr","LOC659419",659419,null,"659419 [Gene Symbol: LOC659419] [Locus Tag: TcasGA2_TC010801] [Chromosome: LGX] [Map Location: ] [Description: dynein heavy chain 7, axonemal] [Gene Type: protein-coding]","LOC659419; TcasGA2_TC010801"]
[47,"NC_007416.3",5863832,"SNV","C","A","Heterozygous",7,24,29.17,1,7,0,0,39.14,7,27,2,7,1.43,0.24,0.71,"no","A/C","No",1,30.74,"XP_970551.1:c.[589G>T]; XP_015836824.1:c.[589G>T]","XP_970551.1:p.[Asp197Tyr]; XP_015836824.1:p.[Asp197Tyr]","LOC659126",659126,null,"659126 [Gene Symbol: LOC659126] [Locus Tag: TcasGA2_TC010840] [Chromosome: LGX] [Map Location: ] [Description: nuclear polyadenylated RNA-binding protein 3] [Gene Type: protein-coding]","LOC659126; TcasGA2_TC010840"]
[48,"NC_007416.3",5863909,"SNV","C","A","Heterozygous",7,27,25.93,0.99,0,7,0,38.43,7,30,1,5,1.36,0.11,0.34,"no","A/C","No",1,22.38,"XP_015836824.1:c.[512G>T]; XP_970551.1:c.[512G>T]","XP_015836824.1:p.[Gly171Val]; XP_970551.1:p.[Gly171Val]","LOC659126",659126,null,"659126 [Gene Symbol: LOC659126] [Locus Tag: TcasGA2_TC010840] [Chromosome: LGX] [Map Location: ] [Description: nuclear polyadenylated RNA-binding protein 3] [Gene Type: protein-coding]","LOC659126; TcasGA2_TC010840"]
[49,"NC_007416.3",5979687,"SNV","C","G","Homozygous",23,23,100,1,19,8,0.3,38.22,27,27,9,18,null,1,1,"no","G/G","No",1,89.91,"XP_970210.1:c.5213G>C","XP_970210.1:p.Ser1738Thr","LOC658755",658755,null,"658755 [Gene Symbol: LOC658755] [Locus Tag: TcasGA2_TC010839] [Chromosome: LGX] [Map Location: ] [Description: vitellogenin] [Gene Type: protein-coding]","LOC658755; TcasGA2_TC010839"]
[50,"NC_007416.3",6320437,"SNV","C","A","Heterozygous",5,22,22.73,0.92,5,4,0.44,33.6,9,28,3,2,-1.29,0.88,0.72,"no","A/C","No",1,11.15,"NP_001127849.1:c.[1076C>A]; XP_008200659.1:c.[989C>A]; XP_015837288.1:c.[974C>A]","NP_001127849.1:p.[Thr359Lys]; XP_008200659.1:p.[Thr330Lys]; XP_015837288.1:p.[Thr325Lys]","Ptc",656155,"patched","656155 [Gene Symbol: Ptc] [Locus Tag: TcasGA2_TC004745] [Chromosome: LGX] [Map Location: ] [Description: patched] [Gene Type: protein-coding]","Ptc; TcasGA2_TC004745"]
[51,"NC_007416.3",6329144,"SNV","C","G","Homozygous",28,28,100,1,18,10,0.36,39.32,28,28,6,13,null,1,1,"no","G/G","No",1,104.96,"XP_015834614.1:c.578C>G","XP_015834614.1:p.Ala193Gly","LOC656239, LOC100381254","656239 , 100381254",null,"656239 [Gene Symbol: LOC656239] [Locus Tag: TcasGA2_TC004625] [Chromosome: LGX] [Map Location: ] [Description: very long-chain-fatty-acid--CoA ligase bubblegum] [Gene Type: protein-coding] || 100381254 [Gene Symbol: LOC100381254] [Locus Tag: TcasGA2_TC004746] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized protein LOC100381254] [Gene Type: protein-coding]","LOC656239; TcasGA2_TC004625 || GLEAN_04746; LOC100381254; TcasGA2_TC004746"]
[52,"NC_007416.3",6537255,"SNV","A","G","Homozygous",21,21,100,1,14,11,0.44,37.76,25,25,8,10,null,1,1,"no","G/G","No",1,83.89,"XP_015834338.1:c.4667A>G","XP_015834338.1:p.Lys1556Arg","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[53,"NC_007416.3",6538063,"SNV","A","T","Homozygous",28,28,100,1,18,22,0.45,37.32,40,40,14,13,null,1,1,"no","T/T","No",1,106.59,"XP_015834338.1:c.5384A>T","XP_015834338.1:p.*1795Leu","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[54,"NC_007416.3",6538522,"SNV","C","T","Heterozygous",14,21,66.67,1,7,7,0.5,38.07,14,21,5,10,-0.56,0.25,0.78,"no","C/T","No",1,45.37,"XP_015834338.1:c.5795C>T","XP_015834338.1:p.Ser1932Leu","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[55,"NC_007416.3",6645333,"SNV","G","T","Heterozygous",7,21,33.33,1,7,0,0,38.14,7,22,1,6,-0.82,0.01,0.07,"no","G/T","No",1,38.93,"XP_008200697.1:c.[357G>T]; XP_008200699.1:c.[54+329C>A]; XP_015833286.1:c.[363G>T]; XP_015833291.1:c.[348G>T]","XP_008200697.1:p.[Trp119Cys]; XP_015833286.1:p.[Trp121Cys]; XP_015833291.1:p.[Trp116Cys]","LOC658403, LOC103314992","658403 , 103314992",null,"658403 [Gene Symbol: LOC658403] [Locus Tag: TcasGA2_TC004611] [Chromosome: LGX] [Map Location: ] [Description: stAR-related lipid transfer protein 13] [Gene Type: protein-coding] || 103314992 [Gene Symbol: LOC103314992] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314992] [Gene Type: protein-coding]","LOC658403; TcasGA2_TC004611 || LOC103314992"]
[56,"NC_007416.3",6725965,"SNV","T","G","Homozygous",21,21,100,1,6,15,0.29,35.38,21,21,6,14,null,1,1,"no","G/G","No",1,83.89,"XP_001810667.2:c.527A>C","XP_001810667.2:p.Lys176Thr","LOC659221",659221,null,"659221 [Gene Symbol: LOC659221] [Locus Tag: TcasGA2_TC004604] [Chromosome: LGX] [Map Location: ] [Description: ribonuclease H1] [Gene Type: protein-coding]","TcasGA2_TC004604; LOC659221"]
[57,"NC_007416.3",6896246,"SNV","C","A","Heterozygous",6,21,28.57,1,6,0,0,40.33,6,21,3,3,1.28,0.12,0.34,"no","A/C","No",1,26.33,"XP_008200716.1:c.34G>T","XP_008200716.1:p.Asp12Tyr","LOC660216",660216,null,"660216 [Gene Symbol: LOC660216] [Locus Tag: TcasGA2_TC004596] [Chromosome: LGX] [Map Location: ] [Description: protein ariadne-1] [Gene Type: protein-coding]","TcasGA2_TC004596; LOC660216"]
[58,"NC_007416.3",7346832,"SNV","G","A","Homozygous",26,26,100,1,16,12,0.43,35.42,28,28,11,21,null,1,1,"no","A/A","No",1,100.55,"XP_008200751.1:c.175G>A","XP_008200751.1:p.Ala59Thr","LOC103315000",103315000,null,"103315000 [Gene Symbol: LOC103315000] [Locus Tag: TcasGA2_TC031552] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103315000] [Gene Type: protein-coding]","TcasGA2_TC031552; LOC103315000"]
[59,"NC_007416.3",7592752,"SNV","G","A","Heterozygous",12,22,54.55,1,1,12,0.08,35.75,13,25,4,3,-0.69,0.03,0.13,"no","A/G","No",1,80.71,"XP_015840780.1:c.[199+80014G>A]; XP_015840873.1:c.[148G>A]; XP_015840777.1:c.[391+80014G>A]","XP_015840873.1:p.Ala50Thr","LOC660322, LOC107399269","660322 , 107399269",null,"660322 [Gene Symbol: LOC660322] [Locus Tag: TcasGA2_TC001692] [Chromosome: LGX] [Map Location: ] [Description: zinc finger protein basonuclin-2] [Gene Type: protein-coding] || 107399269 [Gene Symbol: LOC107399269] [Locus Tag: TcasGA2_TC031582] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC107399269] [Gene Type: protein-coding]","disco-r; TcasGA2_TC001692; LOC660322 || LOC107399269; TcasGA2_TC031582"]
[60,"NC_007416.3",7800795,"SNV","A","T","Heterozygous",5,20,25,0.99,5,0,0,40,5,22,2,3,1.96,0.01,0.13,"no","A/T","No",1,21.07,"XP_008199067.1:c.[5698T>A]; XP_970548.1:c.[5698T>A]","XP_008199067.1:p.[Tyr1900Asn]; XP_970548.1:p.[Tyr1900Asn]","LOC659123",659123,null,"659123 [Gene Symbol: LOC659123] [Locus Tag: TcasGA2_TC001765] [Chromosome: LGX] [Map Location: ] [Description: plexin A] [Gene Type: protein-coding]","PlexA; TcasGA2_TC001765; LOC659123"]
[61,"NC_007416.3",7922861,"SNV","G","T","Heterozygous",8,21,38.1,1,8,0,0,40,8,24,1,5,1.09,0.03,0.24,"no","G/T","No",1,51.67,"XP_008199058.1:c.1507C>A","XP_008199058.1:p.Leu503Ile","LOC658611",658611,null,"658611 [Gene Symbol: LOC658611] [Locus Tag: TcasGA2_TC001759] [Chromosome: LGX] [Map Location: ] [Description: rho guanine nucleotide exchange factor 17] [Gene Type: protein-coding]","TcasGA2_TC001759; LOC658611"]
[62,"NC_007416.3",7948219,"SNV","C","A","Heterozygous",7,21,33.33,1,0,7,0,40.29,7,23,1,2,1.9,0.19,0.21,"no","A/C","No",1,39.07,"XP_969503.1:c.83C>A","XP_969503.1:p.Ala28Glu","LOC657991",657991,null,"657991 [Gene Symbol: LOC657991] [Locus Tag: TcasGA2_TC001710] [Chromosome: LGX] [Map Location: ] [Description: protein MEF2BNB homolog] [Gene Type: protein-coding]","LOC657991; TcasGA2_TC001710"]
[63,"NC_007416.3",8671088,"SNV","C","A","Heterozygous",13,25,52,1,3,11,0.21,38.62,14,34,8,8,1.88,0.67,0.6,"no","A/C","No",1,98.55,"XP_008199008.1:c.[527C>A]; XP_008199007.1:c.[584C>A]; XP_015836611.1:c.[527C>A]","XP_008199008.1:p.[Ala176Glu]; XP_008199007.1:p.[Ala195Glu]; XP_015836611.1:p.[Ala176Glu]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[64,"NC_007416.3",8671200,"SNV","A","T","Heterozygous",14,32,43.75,1,10,4,0.29,38.5,14,33,8,9,1.58,0.21,0.84,"no","A/T","No",1,102.53,"XP_008199008.1:c.[639A>T]; XP_008199007.1:c.[696A>T]; XP_015836611.1:c.[639A>T]","XP_008199008.1:p.[Lys213Asn]; XP_008199007.1:p.[Lys232Asn]; XP_015836611.1:p.[Lys213Asn]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[65,"NC_007416.3",8671672,"SNV","G","A","Heterozygous",18,39,46.15,1,4,14,0.22,39.5,18,39,9,8,0.59,0.49,1,"no","A/G","No",1,133.73,"XP_008199008.1:c.[1111G>A]; XP_015836611.1:c.[1111G>A]; XP_008199007.1:c.[1168G>A]","XP_008199008.1:p.[Glu371Lys]; XP_015836611.1:p.[Glu371Lys]; XP_008199007.1:p.[Glu390Lys]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[66,"NC_007416.3",8671727,"SNV","C","T","Heterozygous",20,28,71.43,1,7,18,0.28,38.25,25,33,11,10,-1.55,0.91,1,"no","C/T","No",1,38.64,"XP_008199007.1:c.[1223C>T]; XP_015836611.1:c.[1166C>T]; XP_008199008.1:c.[1166C>T]","XP_008199007.1:p.[Pro408Leu]; XP_015836611.1:p.[Pro389Leu]; XP_008199008.1:p.[Pro389Leu]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[67,"NC_007417.3",178210,"SNV","A","T","Heterozygous",6,28,21.43,0.93,1,5,0.17,34.5,6,28,2,2,-2.46,0.03,0.52,"no","A/T","No",1,11.83,"XP_015837024.1:c.[304T>A]; XP_015837025.1:c.[304T>A]","XP_015837024.1:p.[Tyr102Asn]; XP_015837025.1:p.[Tyr102Asn]","LOC107398207",107398207,null,"107398207 [Gene Symbol: LOC107398207] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC107398207] [Gene Type: protein-coding]","LOC107398207"]
[68,"NC_007417.3",1859532,"SNV","A","G","Homozygous",21,21,100,1,16,12,0.43,38.19,28,28,9,11,null,1,1,"no","G/G","No",1,80.88,"XP_969441.1:c.1814T>C","XP_969441.1:p.Val605Ala","LOC657922",657922,null,"657922 [Gene Symbol: LOC657922] [Locus Tag: TcasGA2_TC005228] [Chromosome: LG2] [Map Location: ] [Description: RNA polymerase-associated protein CTR9 homolog] [Gene Type: protein-coding]","LOC657922; TcasGA2_TC005228"]
[69,"NC_007417.3",2396792,"SNV","C","A","Heterozygous",6,21,28.57,1,6,0,0,39.83,6,21,6,2,1.25,0.02,0.27,"no","A/C","No",1,26.34,"XP_008200817.1:c.3221G>T","XP_008200817.1:p.Trp1074Leu","LOC655829",655829,null,"655829 [Gene Symbol: LOC655829] [Locus Tag: TcasGA2_TC004563] [Chromosome: LG2] [Map Location: ] [Description: cell division cycle and apoptosis regulator protein 1] [Gene Type: protein-coding]","TcasGA2_TC004563; LOC655829"]
[70,"NC_007417.3",2564911,"SNV","G","A","Homozygous",20,20,100,1,6,16,0.27,38.85,22,22,7,10,null,1,1,"no","A/A","No",1,82.49,"XP_015838592.1:c.[580G>A]; XP_015838597.1:c.[457G>A]","XP_015838592.1:p.[Asp194Asn]; XP_015838597.1:p.[Asp153Asn]","LOC103315010",103315010,null,"103315010 [Gene Symbol: LOC103315010] [Locus Tag: TcasGA2_TC004832] [Chromosome: LG2] [Map Location: ] [Description: homeobox protein rough] [Gene Type: protein-coding]","LOC103315010; TcasGA2_TC004832"]
[71,"NC_007417.3","2763629^2763630","Insertion","-","G","Heterozygous",7,20,35,1,7,0,0,37.14,7,22,2,3,1.74,0.02,0.19,"no","-/G","No",1,48.71,"XP_008200848.1:c.657_658insC","XP_008200848.1:p.Gly220fs","LOC658769",658769,null,"658769 [Gene Symbol: LOC658769] [Locus Tag: TcasGA2_TC004546] [Chromosome: LG2] [Map Location: ] [Description: pupal cuticle protein 36] [Gene Type: protein-coding]","LOC658769; TcasGA2_TC004546"]
[72,"NC_007417.3",3303190,"SNV","G","A","Homozygous",28,28,100,1,12,20,0.38,38.25,32,32,11,18,null,1,1,"no","A/A","No",1,94.53,"XP_967954.1:c.1957G>A","XP_967954.1:p.Val653Ile","LOC656322",656322,null,"656322 [Gene Symbol: LOC656322] [Locus Tag: TcasGA2_TC004862] [Chromosome: LG2] [Map Location: ] [Description: ligase III] [Gene Type: protein-coding]","LOC656322; TcasGA2_TC004862"]
[73,"NC_007417.3",3325310,"SNV","G","T","Heterozygous",7,22,31.82,1,7,0,0,36.29,7,26,1,7,0.74,0.07,0.27,"no","G/T","No",1,36.17,"XP_015838698.1:c.[847C>A]; XP_968418.2:c.[892C>A]; XP_008200637.1:c.[943C>A]; XP_008200638.1:c.[847C>A]; XP_015838689.1:c.[943C>A]; XP_015838707.1:c.[73-956G>T]","XP_015838698.1:p.[Leu283Ile]; XP_968418.2:p.[Leu298Ile]; XP_008200637.1:p.[Leu315Ile]; XP_008200638.1:p.[Leu283Ile]; XP_015838689.1:p.[Leu315Ile]","LOC107398610, LOC656824","107398610 , 656824",null,"107398610 [Gene Symbol: LOC107398610] [Locus Tag: TcasGA2_TC004866] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC107398610] [Gene Type: protein-coding] || 656824 [Gene Symbol: LOC656824] [Locus Tag: TcasGA2_TC004518] [Chromosome: LG2] [Map Location: ] [Description: RNA-binding protein Musashi homolog 2] [Gene Type: protein-coding]","TcasGA2_TC004866; LOC107398610 || LOC656824; TcasGA2_TC004518"]
[74,"NC_007417.3",3688819,"SNV","G","T","Heterozygous",6,21,28.57,1,6,0,0,39.5,6,26,2,4,0.82,0.06,0.16,"no","G/T","No",1,26.16,"XP_970568.2:c.635C>A","XP_970568.2:p.Thr212Asn","LOC659146",659146,null,"659146 [Gene Symbol: LOC659146] [Locus Tag: TcasGA2_TC004501] [Chromosome: LG2] [Map Location: ] [Description: transcription elongation regulator 1] [Gene Type: protein-coding]","TcasGA2_TC004501; LOC659146"]
[75,"NC_007417.3",3738558,"SNV","T","C","Heterozygous",12,25,48,1,8,4,0.33,38.17,12,26,8,9,0.92,0.81,1,"no","C/T","No",1,97.75,"XP_008200884.1:c.[2032+796A>G]; XP_015838476.1:c.[2640A>G]; XP_008200885.1:c.[1969+1119A>G]; XP_015838479.1:c.[2640A>G]","XP_015838476.1:p.[Ile880Met]; XP_015838479.1:p.[Ile880Met]","LOC659560",659560,null,"659560 [Gene Symbol: LOC659560] [Locus Tag: TcasGA2_TC004497] [Chromosome: LG2] [Map Location: ] [Description: protein hu-li tai shao] [Gene Type: protein-coding]","hts; TcasGA2_TC004497; LOC659560"]
[76,"NC_007417.3",4104482,"SNV","A","G","Heterozygous",5,20,25,0.99,0,5,0,37.8,5,20,2,4,-0.39,0.01,0.72,"no","A/G","No",1,22.59,"XP_015838443.1:c.[647A>G]; XP_008200898.1:c.[1441+14671T>C]","XP_015838443.1:p.Asp216Gly","LOC103315031, LOC660918","103315031 , 660918",null,"103315031 [Gene Symbol: LOC103315031] [Locus Tag: TcasGA2_TC032013] [Chromosome: LG2] [Map Location: ] [Description: lysine-specific histone demethylase 1A] [Gene Type: protein-coding] || 660918 [Gene Symbol: LOC660918] [Locus Tag: TcasGA2_TC004900] [Chromosome: LG2] [Map Location: ] [Description: trypsin-1] [Gene Type: protein-coding]","TcasGA2_TC032013; LOC103315031 || H57; TcasGA2_TC004900; LOC660918"]
[77,"NC_007417.3",4567705,"SNV","T","A","Homozygous",20,20,100,1,19,3,0.14,35.65,22,22,6,15,null,1,1,"no","A/A","No",1,82.49,"XP_008200863.1:c.784T>A","XP_008200863.1:p.Ser262Thr","Srf",661307,"serum response factor","661307 [Gene Symbol: Srf] [Locus Tag: TcasGA2_TC004911] [Chromosome: LG2] [Map Location: ] [Description: serum response factor] [Gene Type: protein-coding]","Srf; bs; TcasGA2_TC004911"]
[78,"NC_007417.3","4567739..4567741","Deletion","CGA","-","Homozygous",20,20,100,1,16,4,0.2,35.8,20,20,5,16,null,1,1,"no","-/-","No",1,200,"XP_008200863.1:c.818_820delCGA","XP_008200863.1:p.Thr279del","Srf",661307,"serum response factor","661307 [Gene Symbol: Srf] [Locus Tag: TcasGA2_TC004911] [Chromosome: LG2] [Map Location: ] [Description: serum response factor] [Gene Type: protein-coding]","Srf; bs; TcasGA2_TC004911"]
[79,"NC_007417.3",4807613,"SNV","G","C","Homozygous",23,23,100,1,17,12,0.41,38.57,29,29,11,11,null,1,1,"no","C/C","No",1,89.91,"XP_008200932.1:c.[2011-10C>G]; XP_973926.2:c.[2131C>G]; XP_015838161.1:c.[2131C>G]","XP_973926.2:p.[Leu711Val]; XP_015838161.1:p.[Leu711Val]","LOC662755",662755,null,"662755 [Gene Symbol: LOC662755] [Locus Tag: TcasGA2_TC004452] [Chromosome: LG2] [Map Location: ] [Description: toll-like receptor 2] [Gene Type: protein-coding]","LOC662755; TcasGA2_TC004452; Toll2"]
[80,"NC_007417.3",4993634,"SNV","G","A","Heterozygous",12,26,46.15,1,5,9,0.36,39,14,29,7,7,0.82,0.52,0.99,"no","A/G","No",1,93.48,"XP_008200957.1:c.1826G>A","XP_008200957.1:p.Arg609His","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[81,"NC_007417.3",4993640,"SNV","A","C","Heterozygous",12,32,37.5,1,5,8,0.38,38.33,13,34,7,7,0.99,0.17,0.83,"no","A/C","No",1,80.32,"XP_008200957.1:c.1832A>C","XP_008200957.1:p.Asn611Thr","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[82,"NC_007417.3",4993665,"SNV","G","T","Heterozygous",7,28,25,0.99,5,4,0.44,39.14,9,31,4,4,0.08,0.96,0.99,"no","G/T","No",1,19.48,"XP_008200957.1:c.1857G>T","XP_008200957.1:p.Leu619Phe","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[83,"NC_007417.3",4993677,"SNV","G","T","Homozygous",29,29,100,1,18,12,0.4,39.03,30,30,13,18,null,1,1,"no","T/T","No",1,109.6,"XP_008200957.1:c.1869G>T","XP_008200957.1:p.Glu623Asp","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[84,"NC_007417.3","4995172..4995173","MNV","GG","AA","Homozygous",22,22,100,1,12,13,0.48,37.3,25,25,11,12,null,1,1,"no","AA/AA","No",1,200,"XP_015838797.1:c.1365_1366delCCinsTT","XP_015838797.1:p.Leu456Phe","LOC103315048",103315048,null,"103315048 [Gene Symbol: LOC103315048] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: sodium channel protein Nach-like] [Gene Type: protein-coding]","LOC103315048"]
[85,"NC_007417.3",4995181,"SNV","A","G","Heterozygous",8,22,36.36,1,0,8,0,38.25,8,25,2,2,0.55,0.05,0.08,"no","A/G","No",1,55.3,"XP_015838797.1:c.1357T>C","XP_015838797.1:p.Tyr453His","LOC103315048",103315048,null,"103315048 [Gene Symbol: LOC103315048] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: sodium channel protein Nach-like] [Gene Type: protein-coding]","LOC103315048"]
[86,"NC_007417.3",4998145,"SNV","A","G","Homozygous",21,21,100,1,18,10,0.36,36.05,28,28,9,11,null,1,1,"no","G/G","No",1,83.89,"XP_968946.1:c.829A>G","XP_968946.1:p.Ile277Val","LOC657390",657390,null,"657390 [Gene Symbol: LOC657390] [Locus Tag: TcasGA2_TC004953] [Chromosome: LG2] [Map Location: ] [Description: lysosomal alpha-glucosidase] [Gene Type: protein-coding]","TcasGA2_TC004953; LOC657390"]
[87,"NC_007417.3",5313776,"SNV","T","C","Homozygous",25,25,100,1,18,10,0.36,37.68,28,28,8,17,null,1,1,"no","C/C","No",1,95.92,"XP_970101.1:c.622T>C","XP_970101.1:p.Ser208Pro","LOC658643",658643,null,"658643 [Gene Symbol: LOC658643] [Locus Tag: TcasGA2_TC004963] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC658643] [Gene Type: protein-coding]","LOC658643; TcasGA2_TC004963"]
[88,"NC_007417.3",5453104,"SNV","T","C","Homozygous",20,20,100,1,9,15,0.38,35.7,24,24,10,11,null,1,1,"no","C/C","No",1,80.88,"XP_971504.1:c.434T>C","XP_971504.1:p.Ile145Thr","LOC660156",660156,null,"660156 [Gene Symbol: LOC660156] [Locus Tag: TcasGA2_TC004979] [Chromosome: LG2] [Map Location: ] [Description: puff-specific protein Bx42] [Gene Type: protein-coding]","LOC660156; TcasGA2_TC004979"]
[89,"NC_007417.3",5833326,"SNV","G","A","Homozygous",21,21,100,1,14,11,0.44,36.86,25,25,9,15,null,1,1,"no","A/A","No",1,85.5,"XP_008201310.2:c.[823G>A]; XP_015839849.1:c.[2083G>A]","XP_008201310.2:p.[Val275Ile]; XP_015839849.1:p.[Val695Ile]","LOC661310, LOC661247","661310 , 661247",null,"661310 [Gene Symbol: LOC661310] [Locus Tag: TcasGA2_TC000800] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC661310] [Gene Type: protein-coding] || 661247 [Gene Symbol: LOC661247] [Locus Tag: TcasGA2_TC000799] [Chromosome: LG2] [Map Location: ] [Description: apyrase] [Gene Type: protein-coding]","LOC661310; TcasGA2_TC000800 || TcasGA2_TC000799; LOC661247"]
[90,"NC_007417.3",5848946,"SNV","G","A","Heterozygous",5,20,25,0.99,4,4,0.5,38.8,8,23,2,5,-0.44,0.15,0.74,"no","A/G","No",1,21.09,"XP_015840667.1:c.[1079-350C>T]; XP_015840668.1:c.[1079-82C>T]; XP_015840669.1:c.[1043-320C>T]; XP_015840672.1:c.[1178C>T]; XP_015840665.1:c.[1079-320C>T]; XP_015840666.1:c.[1079-620C>T]","XP_015840672.1:p.Ala393Val","LOC661409",661409,null,"661409 [Gene Symbol: LOC661409] [Locus Tag: TcasGA2_TC000760] [Chromosome: LG2] [Map Location: ] [Description: antichymotrypsin-2] [Gene Type: protein-coding]","LOC661409; TcasGA2_TC000760; serpin1"]
[91,"NC_007417.3",6271723,"SNV","A","G","Homozygous",23,23,100,1,7,19,0.27,38.13,26,26,8,12,null,1,1,"no","G/G","No",1,89.91,"XP_015840607.1:c.[110T>C]; XP_015840605.1:c.[110T>C]; XP_015840604.1:c.[110T>C]; XP_015840603.1:c.[110T>C]; XP_015840606.1:c.[110T>C]; XP_015840608.1:c.[110T>C]","XP_015840607.1:p.[Val37Ala]; XP_015840605.1:p.[Val37Ala]; XP_015840604.1:p.[Val37Ala]; XP_015840603.1:p.[Val37Ala]; XP_015840606.1:p.[Val37Ala]; XP_015840608.1:p.[Val37Ala]","LOC662567",662567,null,"662567 [Gene Symbol: LOC662567] [Locus Tag: TcasGA2_TC000749] [Chromosome: LG2] [Map Location: ] [Description: spectrin alpha chain] [Gene Type: protein-coding]","TcasGA2_TC000749; LOC662567; alpha-Spec"]
[92,"NC_007417.3",6860038,"SNV","T","C","Homozygous",25,25,100,1,17,10,0.37,38.48,27,27,12,14,null,1,1,"no","C/C","No",1,95.93,"XP_015840483.1:c.[441+8574T>C]; XP_015840479.1:c.[441+8574T>C]; XP_008201382.2:c.[441+8574T>C]; XP_015840480.1:c.[441+8574T>C]; XP_015839833.1:c.[781A>G]; XP_015840482.1:c.[441+8574T>C]","XP_015839833.1:p.Ser261Gly","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[93,"NC_007417.3",6860074,"SNV","C","T","Homozygous",24,24,100,1,14,11,0.44,37.04,25,25,13,12,null,1,1,"no","T/T","No",1,94.56,"XP_015839833.1:c.[745G>A]; XP_008201382.2:c.[441+8610C>T]; XP_015840479.1:c.[441+8610C>T]; XP_015840483.1:c.[441+8610C>T]; XP_015840482.1:c.[441+8610C>T]; XP_015840480.1:c.[441+8610C>T]","XP_015839833.1:p.Gly249Ser","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[94,"NC_007417.3",6860110,"SNV","T","C","Homozygous",26,26,100,1,11,15,0.42,35.65,26,26,9,12,null,1,1,"no","C/C","No",1,98.94,"XP_015840479.1:c.[441+8646T>C]; XP_015839833.1:c.[709A>G]; XP_015840482.1:c.[441+8646T>C]; XP_015840480.1:c.[441+8646T>C]; XP_015840483.1:c.[441+8646T>C]; XP_008201382.2:c.[441+8646T>C]","XP_015839833.1:p.Ser237Gly","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[95,"NC_007417.3",6860132,"SNV","C","G","Heterozygous",9,27,33.33,1,4,5,0.44,34.44,9,27,3,5,-1.52,0.75,0.93,"no","C/G","No",1,52.95,"XP_015840480.1:c.[441+8668C>G]; XP_015840483.1:c.[441+8668C>G]; XP_015840479.1:c.[441+8668C>G]; XP_015840482.1:c.[441+8668C>G]; XP_008201382.2:c.[441+8668C>G]; XP_015839833.1:c.[687G>C]","XP_015839833.1:p.Lys229Asn","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[96,"NC_007417.3",6860137,"SNV","C","A","Heterozygous",18,27,66.67,1,6,14,0.3,35.28,20,29,7,9,0.41,0.9,1,"no","A/C","No",1,55.88,"XP_015840482.1:c.[441+8673C>A]; XP_015840483.1:c.[441+8673C>A]; XP_008201382.2:c.[441+8673C>A]; XP_015839833.1:c.[682G>T]; XP_015840479.1:c.[441+8673C>A]; XP_015840480.1:c.[441+8673C>A]","XP_015839833.1:p.Asp228Tyr","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[97,"NC_007417.3",6860152,"SNV","T","C","Heterozygous",9,29,31.03,1,4,7,0.36,37.44,11,34,5,6,0.9,0.33,1,"no","C/T","No",1,48.62,"XP_015840480.1:c.[441+8688T>C]; XP_015839833.1:c.[667A>G]; XP_015840483.1:c.[441+8688T>C]; XP_015840479.1:c.[441+8688T>C]; XP_015840482.1:c.[441+8688T>C]; XP_008201382.2:c.[441+8688T>C]","XP_015839833.1:p.Ser223Gly","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[98,"NC_007417.3",7062125,"SNV","T","G","Homozygous",21,21,100,1,16,15,0.48,37.38,31,31,11,12,null,1,1,"no","G/G","No",1,83.89,"XP_015840433.1:c.[315A>C]; XP_008201397.2:c.[315A>C]; XP_015840436.1:c.[315A>C]; XP_015840437.1:c.[315A>C]","XP_015840433.1:p.[Gln105His]; XP_008201397.2:p.[Gln105His]; XP_015840436.1:p.[Gln105His]; XP_015840437.1:p.[Gln105His]","LOC663627, LOC103315137","663627 , 103315137",null,"663627 [Gene Symbol: LOC663627] [Locus Tag: TcasGA2_TC000710] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: centrosomal protein of 290 kDa] [Gene Type: protein-coding] || 103315137 [Gene Symbol: LOC103315137] [Locus Tag: TcasGA2_TC032083] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315137] [Gene Type: protein-coding]","LOC663627; TcasGA2_TC000710 || LOC103315137; TcasGA2_TC032083"]
[99,"NC_007417.3",7153534,"SNV","A","C","Homozygous",24,24,100,1,17,11,0.39,38.25,28,28,7,13,null,1,1,"no","C/C","No",1,92.92,"XP_015840449.1:c.[39+22933T>G]; XP_008201399.1:c.[314A>C]","XP_008201399.1:p.Asn105Thr","LOC663672, LOC103315177","663672 , 103315177",null,"663672 [Gene Symbol: LOC663672] [Locus Tag: TcasGA2_TC000706] [Chromosome: LG2] [Map Location: ] [Description: protein sprint] [Gene Type: protein-coding] || 103315177 [Gene Symbol: LOC103315177] [Locus Tag: TcasGA2_TC000859] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315177] [Gene Type: protein-coding]","TcasGA2_TC000706; LOC663672 || TcasGA2_TC000859; LOC103315177"]
[100,"NC_007417.3",7642307,"SNV","A","C","Homozygous",22,22,100,1,11,15,0.42,36.73,26,26,11,11,null,1,1,"no","C/C","No",1,86.9,"XP_967870.1:c.19T>G","XP_967870.1:p.Ser7Ala","LOC663447",663447,null,"663447 [Gene Symbol: LOC663447] [Locus Tag: TcasGA2_TC000676] [Chromosome: LG2] [Map Location: ] [Description: fatty-acid amide hydrolase 2-B] [Gene Type: protein-coding]","LOC663447; TcasGA2_TC000676"]
[101,"NC_007417.3",7746943,"SNV","G","A","Heterozygous",9,29,31.03,1,9,0,0,36.78,9,29,1,7,1.41,0.17,0.35,"no","A/G","No",1,46.95,"XP_008201441.1:c.[781G>A]; XP_008201440.1:c.[781G>A]; XP_015840716.1:c.[781G>A]","XP_008201441.1:p.[Gly261Arg]; XP_008201440.1:p.[Gly261Arg]; XP_015840716.1:p.[Gly261Arg]","LOC664124",664124,null,"664124 [Gene Symbol: LOC664124] [Locus Tag: TcasGA2_TC000880] [Chromosome: LG2] [Map Location: ] [Description: zinc finger MIZ domain-containing protein 1] [Gene Type: protein-coding]","LOC664124; TcasGA2_TC000880"]
[102,"NC_007417.3",7884334,"SNV","C","A","Heterozygous",6,20,30,1,6,0,0,39.83,6,22,2,5,1.81,0.1,0.79,"no","A/C","No",1,29.12,"XP_015839445.1:c.[341C>A]; NP_001034519.1:c.[341C>A]; XP_008201244.1:c.[341C>A]; XP_015839441.1:c.[341C>A]; XP_015839446.1:c.[341C>A]","XP_015839445.1:p.[Ala114Asp]; NP_001034519.1:p.[Ala114Asp]; XP_008201244.1:p.[Ala114Asp]; XP_015839441.1:p.[Ala114Asp]; XP_015839446.1:p.[Ala114Asp]","Abd-B",641596,"abdominal-B","641596 [Gene Symbol: Abd-B] [Locus Tag: TcasGA2_TC000889] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: abdominal-B] [Gene Type: protein-coding]","Abd-B; TcasGA2_TC000889"]
[103,"NC_007417.3","8619110..8619111","MNV","CT","TG","Homozygous",21,21,100,1,13,8,0.38,36.05,21,21,8,13,null,1,1,"no","TG/TG","No",1,200,"XP_975465.1:c.126_127delCTinsTG","XP_975465.1:p.Ser43Ala","LOC664364",664364,null,"664364 [Gene Symbol: LOC664364] [Locus Tag: TcasGA2_TC000930] [Chromosome: LG2] [Map Location: ] [Description: SPARC] [Gene Type: protein-coding]","LOC664364; TcasGA2_TC000930"]
[104,"NC_007417.3",8699756,"SNV","G","C","Homozygous",20,20,100,1,12,12,0.5,38,24,24,8,13,null,1,1,"no","C/C","No",1,80.88,"XP_975499.1:c.[1584G>C]; XP_008201281.1:c.[346+2201G>C]","XP_975499.1:p.Glu528Asp","LOC664403, LOC664399","664403 , 664399",null,"664403 [Gene Symbol: LOC664403] [Locus Tag: TcasGA2_TC000945] [Chromosome: LG2] [Map Location: ] [Description: choline O-acetyltransferase] [Gene Type: protein-coding] || 664399 [Gene Symbol: LOC664399] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: vesicular acetylcholine transporter] [Gene Type: protein-coding]","LOC664403; TcasGA2_TC000945 || LOC664399"]
[105,"NC_007417.3",8900326,"SNV","C","T","Homozygous",21,21,100,1,15,10,0.4,37.38,25,25,9,13,null,1,1,"no","T/T","No",1,85.53,"XP_967720.2:c.[1529G>A]; XP_015840574.1:c.[1529G>A]; XP_015840573.1:c.[1529G>A]","XP_967720.2:p.[Arg510Lys]; XP_015840574.1:p.[Arg510Lys]; XP_015840573.1:p.[Arg510Lys]","LOC656076",656076,null,"656076 [Gene Symbol: LOC656076] [Locus Tag: TcasGA2_TC000625] [Chromosome: LG2] [Map Location: ] [Description: chaoptin] [Gene Type: protein-coding]","LOC656076; TcasGA2_TC000625"]
[106,"NC_007417.3",9021934,"SNV","G","T","Heterozygous",6,21,28.57,1,6,0,0,40,6,21,1,6,0.16,0.03,0.42,"no","G/T","No",1,26.17,"XP_008195501.1:c.[456G>T]; XP_008195506.1:c.[456G>T]; XP_015840622.1:c.[456G>T]","XP_008195501.1:p.[Glu152Asp]; XP_008195506.1:p.[Glu152Asp]; XP_015840622.1:p.[Glu152Asp]","LOC657865",657865,null,"657865 [Gene Symbol: LOC657865] [Locus Tag: TcasGA2_TC000971] [Chromosome: LG2] [Map Location: ] [Description: probable E3 ubiquitin-protein ligase HERC1] [Gene Type: protein-coding]","TcasGA2_TC000971; LOC657865"]
[107,"NC_007417.3",9108430,"SNV","T","C","Homozygous",20,20,100,1,10,19,0.34,38.75,29,29,10,15,null,1,1,"no","C/C","No",1,80.88,"XP_015840569.1:c.[10684A>G]; XP_015840566.1:c.[10834A>G]; XP_015840564.1:c.[10846A>G]; XP_015840567.1:c.[10795A>G]; XP_015840570.1:c.[10672A>G]; XP_015840565.1:c.[10834A>G]; XP_015840568.1:c.[10735A>G]","XP_015840569.1:p.[Thr3562Ala]; XP_015840566.1:p.[Thr3612Ala]; XP_015840564.1:p.[Thr3616Ala]; XP_015840567.1:p.[Thr3599Ala]; XP_015840570.1:p.[Thr3558Ala]; XP_015840565.1:p.[Thr3612Ala]; XP_015840568.1:p.[Thr3579Ala]","LOC658776",658776,null,"658776 [Gene Symbol: LOC658776] [Locus Tag: TcasGA2_TC000606] [Chromosome: LG2] [Map Location: ] [Description: histone-lysine N-methyltransferase 2C] [Gene Type: protein-coding]","LOC658776; TcasGA2_TC000606"]
[108,"NC_007417.3",9163774,"SNV","A","T","Homozygous",20,20,100,1,8,14,0.36,38,22,22,10,11,null,1,1,"no","T/T","No",1,82.52,"XP_008201007.1:c.425A>T","XP_008201007.1:p.Asn142Ile","LOC103315057",103315057,null,"103315057 [Gene Symbol: LOC103315057] [Locus Tag: TcasGA2_TC000980] [Chromosome: LG2] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103315057; TcasGA2_TC000980"]
[109,"NC_007417.3","9173988^9173989","Insertion","-","A","Heterozygous",6,23,26.09,1,6,0,0,35.67,6,23,1,5,-1.23,0.02,0.54,"no","-/A","No",1,25.5,"XP_008201044.1:c.[25_26insA]; NP_001280534.1:c.[25_26insA]","XP_008201044.1:p.[Val9fs]; NP_001280534.1:p.[Val9fs]","LOC659368",659368,"acetylcholinesterase 2","659368 [Gene Symbol: LOC659368] [Locus Tag: TcasGA2_TC000981] [Chromosome: LG2] [Map Location: ] [Description: acetylcholinesterase 2] [Gene Type: protein-coding]","LOC659368; AO-Ace; TcasGA2_TC000981; AChE-2; AChE"]
[110,"NC_007417.3",9174129,"SNV","C","A","Heterozygous",7,21,33.33,1,0,7,0,34.29,7,27,2,3,-0.22,0.34,0.11,"no","A/C","No",1,39.14,"XP_008201044.1:c.[166C>A]; NP_001280534.1:c.[166C>A]","XP_008201044.1:p.[Leu56Met]; NP_001280534.1:p.[Leu56Met]","LOC659368",659368,"acetylcholinesterase 2","659368 [Gene Symbol: LOC659368] [Locus Tag: TcasGA2_TC000981] [Chromosome: LG2] [Map Location: ] [Description: acetylcholinesterase 2] [Gene Type: protein-coding]","LOC659368; AO-Ace; TcasGA2_TC000981; AChE-2; AChE"]
[111,"NC_007417.3",9305682,"SNV","G","C","Homozygous",30,30,100,1,17,18,0.49,36.83,35,35,9,12,null,1,1,"no","C/C","No",1,110.97,"XP_971263.2:c.774C>G","XP_971263.2:p.Asn258Lys","LOC659904",659904,null,"659904 [Gene Symbol: LOC659904] [Locus Tag: TcasGA2_TC000592] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC659904] [Gene Type: protein-coding]","TcasGA2_TC000592; LOC659904"]
[112,"NC_007417.3",9305728,"SNV","A","G","Homozygous",20,20,100,1,7,20,0.26,40.45,27,27,6,6,null,1,1,"no","G/G","No",1,80.88,"XP_971263.2:c.728T>C","XP_971263.2:p.Val243Ala","LOC659904",659904,null,"659904 [Gene Symbol: LOC659904] [Locus Tag: TcasGA2_TC000592] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC659904] [Gene Type: protein-coding]","TcasGA2_TC000592; LOC659904"]
[113,"NC_007417.3",9315248,"SNV","G","A","Homozygous",20,21,95.24,1,15,8,0.35,35.45,23,24,5,12,null,0.99,1,"no","A/A","No",1,51.98,"XP_008201052.1:c.[4319C>T]; XP_015840684.1:c.[4319C>T]; XP_971386.1:c.[4316C>T]; XP_015840685.1:c.[4319C>T]; XP_008201053.1:c.[4319C>T]","XP_008201052.1:p.[Pro1440Leu]; XP_015840684.1:p.[Pro1440Leu]; XP_971386.1:p.[Pro1439Leu]; XP_015840685.1:p.[Pro1440Leu]; XP_008201053.1:p.[Pro1440Leu]","LOC660029",660029,null,"660029 [Gene Symbol: LOC660029] [Locus Tag: TcasGA2_TC000591] [Chromosome: LG2] [Map Location: ] [Description: methyl-CpG-binding domain protein 5] [Gene Type: protein-coding]","LOC660029; TcasGA2_TC000591"]
[114,"NC_007417.3",9480192,"SNV","C","T","Homozygous",20,20,100,1,16,6,0.27,36.05,22,22,8,12,null,1,1,"no","T/T","No",1,79.52,"XP_015840602.1:c.2590C>T","XP_015840602.1:p.Gln864*","LOC661248",661248,null,"661248 [Gene Symbol: LOC661248] [Locus Tag: TcasGA2_TC032130] [Chromosome: LG2] [Map Location: ] [Description: tyrosine-protein phosphatase non-receptor type 21] [Gene Type: protein-coding]","LOC661248; TcasGA2_TC032130"]
[115,"NC_007417.3",9846082,"SNV","A","C","Homozygous",27,27,100,1,13,20,0.39,36.67,33,33,14,17,null,1,1,"no","C/C","No",1,101.94,"XP_008201012.1:c.2586T>G","XP_008201012.1:p.Asp862Glu","LOC662363",662363,null,"662363 [Gene Symbol: LOC662363] [Locus Tag: TcasGA2_TC000558] [Chromosome: LG2] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 7] [Gene Type: protein-coding]","LOC662363; TcasGA2_TC000558"]
[116,"NC_007417.3",10008142,"SNV","G","C","Homozygous",25,25,100,1,12,17,0.41,36.36,29,29,10,8,null,1,1,"no","C/C","No",1,95.93,"XP_974504.1:c.739C>G","XP_974504.1:p.Gln247Glu","LOC663360",663360,null,"663360 [Gene Symbol: LOC663360] [Locus Tag: TcasGA2_TC000541] [Chromosome: LG2] [Map Location: ] [Description: IKK gamma] [Gene Type: protein-coding]","IKKg; LOC663360; TcasGA2_TC000541"]
[117,"NC_007417.3",10033578,"SNV","C","T","Homozygous",24,24,100,1,15,19,0.44,38.08,34,34,15,16,null,1,1,"no","T/T","No",1,94.55,"XP_015840642.1:c.[985G>A]; XP_015840643.1:c.[985G>A]; XP_015840645.1:c.[985G>A]; XP_008201155.1:c.[985G>A]","XP_015840642.1:p.[Gly329Ser]; XP_015840643.1:p.[Gly329Ser]; XP_015840645.1:p.[Gly329Ser]; XP_008201155.1:p.[Gly329Ser]","LOC663484",663484,null,"663484 [Gene Symbol: LOC663484] [Locus Tag: TcasGA2_TC000538] [Chromosome: LG2] [Map Location: ] [Description: DENN domain-containing protein 4C] [Gene Type: protein-coding]","LOC663484; TcasGA2_TC000538"]
[118,"NC_007417.3",10181705,"SNV","G","A","Homozygous",20,20,100,1,10,14,0.42,34.65,24,24,8,12,null,1,1,"no","A/A","No",1,82.49,"XP_008201022.1:c.[5561G>A]; XP_015840738.1:c.[5495G>A]","XP_008201022.1:p.[Arg1854His]; XP_015840738.1:p.[Arg1832His]","LOC663795",663795,null,"663795 [Gene Symbol: LOC663795] [Locus Tag: TcasGA2_TC001044] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC663795] [Gene Type: protein-coding]","TcasGA2_TC001044; LOC663795"]
[119,"NC_007417.3",10514647,"SNV","G","A","Homozygous",22,22,100,1,21,7,0.25,37.23,28,28,8,15,null,1,1,"no","A/A","No",1,88.51,"XP_015840558.1:c.[247C>T]; XP_975293.1:c.[223+24C>T]; XP_015840560.1:c.[247C>T]; XP_015840559.1:c.[247C>T]; XP_008201207.1:c.[223+24C>T]","XP_015840558.1:p.[Pro83Ser]; XP_015840560.1:p.[Pro83Ser]; XP_015840559.1:p.[Pro83Ser]","LOC664187",664187,null,"664187 [Gene Symbol: LOC664187] [Locus Tag: TcasGA2_TC000505] [Chromosome: LG2] [Map Location: ] [Description: importin subunit alpha-5] [Gene Type: protein-coding]","TcasGA2_TC000505; LOC664187"]
[120,"NC_007417.3",10518410,"SNV","C","A","Heterozygous",10,22,45.45,1,0,10,0,40.2,10,24,1,2,2.44,0.11,0.23,"no","A/C","No",1,74.58,"XP_008201208.1:c.[1575G>T]; XP_008201209.1:c.[1521G>T]","XP_008201208.1:p.[Glu525Asp]; XP_008201209.1:p.[Glu507Asp]","LOC103315119",103315119,null,"103315119 [Gene Symbol: LOC103315119] [Locus Tag: TcasGA2_TC000504] [Chromosome: LG2] [Map Location: ] [Description: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13] [Gene Type: protein-coding]","TcasGA2_TC000504; LOC103315119"]
[121,"NC_007417.3","10580397^10580398","Insertion","-","G","Heterozygous",10,20,50,1,2,10,0.17,38.6,12,26,3,4,2.23,0.32,0.67,"no","-/G","No",1,82.08,"XP_975348.1:c.1499_1500insG","XP_975348.1:p.Pro502fs","LOC664244",664244,null,"664244 [Gene Symbol: LOC664244] [Locus Tag: TcasGA2_TC001075] [Chromosome: LG2] [Map Location: ] [Description: tubulin polyglutamylase ttll6] [Gene Type: protein-coding]","TcasGA2_TC001075; LOC664244"]
[122,"NC_007417.3","10580398^10580399","Insertion","-","AC","Heterozygous",10,20,50,1,2,10,0.17,37.15,12,26,4,5,1.95,0.36,0.67,"no","complex","No",1,200,"XP_975348.1:c.1500_1501insAC","XP_975348.1:p.Lys501fs","LOC664244",664244,null,"664244 [Gene Symbol: LOC664244] [Locus Tag: TcasGA2_TC001075] [Chromosome: LG2] [Map Location: ] [Description: tubulin polyglutamylase ttll6] [Gene Type: protein-coding]","TcasGA2_TC001075; LOC664244"]
[123,"NC_007417.3",10580688,"SNV","A","T","Homozygous",36,36,100,1,13,27,0.33,37.72,40,40,14,15,null,1,1,"no","T/T","No",1,130.66,"XP_975348.1:c.1790A>T","XP_975348.1:p.Lys597Met","LOC664244",664244,null,"664244 [Gene Symbol: LOC664244] [Locus Tag: TcasGA2_TC001075] [Chromosome: LG2] [Map Location: ] [Description: tubulin polyglutamylase ttll6] [Gene Type: protein-coding]","TcasGA2_TC001075; LOC664244"]
[124,"NC_007417.3",10687683,"SNV","C","A","Heterozygous",7,28,25,0.99,0,7,0,34.57,7,35,1,1,-2.71,0.02,0.46,"no","A/C","No",1,19.67,"XP_001815875.1:c.679C>A","XP_001815875.1:p.Leu227Ile","LOC100141793",100141793,null,"100141793 [Gene Symbol: LOC100141793] [Locus Tag: TcasGA2_TC001083] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC100141793] [Gene Type: protein-coding]","LOC100141793; TcasGA2_TC001083"]
[125,"NC_007417.3",10818419,"SNV","A","G","Heterozygous",7,20,35,1,3,4,0.43,38.29,7,22,2,5,-0.16,0.29,0.99,"no","A/G","No",1,48.11,"XP_008201504.1:c.[1753T>C]; XP_008201505.1:c.[1750T>C]","XP_008201504.1:p.[Ser585Pro]; XP_008201505.1:p.[Ser584Pro]","LOC103315202",103315202,null,"103315202 [Gene Symbol: LOC103315202] [Locus Tag: TcasGA2_TC000479] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315202] [Gene Type: protein-coding]","TcasGA2_TC000479; LOC103315202"]
[126,"NC_007417.3",10905565,"SNV","C","G","Heterozygous",8,20,40,1,5,3,0.38,40,8,20,3,5,null,0.06,0.55,"no","G/T","No",1,62.3,"XP_967801.1:c.840G>C","XP_967801.1:p.Glu280Asp","LOC656163",656163,null,"656163 [Gene Symbol: LOC656163] [Locus Tag: TcasGA2_TC000470] [Chromosome: LG2] [Map Location: ] [Description: sine oculis-binding protein] [Gene Type: protein-coding]","TcasGA2_TC000470; LOC656163; Sobp"]
[127,"NC_007417.3",10920538,"SNV","G","A","Homozygous",20,20,100,1,14,6,0.3,38.35,20,20,8,12,null,1,1,"no","A/A","No",1,82.49,"XP_968425.2:c.46G>A","XP_968425.2:p.Ala16Thr","LOC656831",656831,null,"656831 [Gene Symbol: LOC656831] [Locus Tag: TcasGA2_TC001101] [Chromosome: LG2] [Map Location: ] [Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10] [Gene Type: protein-coding]","Ddx10; LOC656831; TcasGA2_TC001101"]
[128,"NC_007417.3",11004685,"SNV","G","C","Homozygous",24,24,100,1,17,7,0.29,39.04,24,24,11,15,null,1,1,"no","C/C","No",1,92.92,"XP_968878.1:c.1531G>C","XP_968878.1:p.Ala511Pro","LOC657319",657319,null,"657319 [Gene Symbol: LOC657319] [Locus Tag: TcasGA2_TC001105] [Chromosome: LG2] [Map Location: ] [Description: protein downstream neighbor of son homolog] [Gene Type: protein-coding]","TcasGA2_TC001105; LOC657319"]
[129,"NC_007417.3",11039801,"SNV","G","T","Homozygous",24,24,100,1,4,20,0.17,36.79,24,24,6,12,null,1,1,"no","T/T","No",1,94.56,"XP_969172.2:c.[32C>A]; XP_008201523.1:c.[32C>A]","XP_969172.2:p.[Thr11Asn]; XP_008201523.1:p.[Thr11Asn]","LOC657632",657632,null,"657632 [Gene Symbol: LOC657632] [Locus Tag: TcasGA2_TC000459] [Chromosome: LG2] [Map Location: ] [Description: monocarboxylate transporter 12-B] [Gene Type: protein-coding]","LOC657632; TcasGA2_TC000459"]
[130,"NC_007417.3",11235596,"SNV","T","C","Homozygous",27,32,84.38,0.94,4,23,0.15,39.37,27,32,7,11,null,0.96,1,"no","C/C","No",1,12.59,"XP_008201541.1:c.65A>G","XP_008201541.1:p.Asp22Gly","LOC103315212",103315212,null,"103315212 [Gene Symbol: LOC103315212] [Locus Tag: TcasGA2_TC000440] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315212] [Gene Type: protein-coding]","LOC103315212; TcasGA2_TC000440"]
[131,"NC_007417.3",11294631,"SNV","C","G","Homozygous",22,22,100,1,18,4,0.18,38.09,22,22,7,15,null,1,1,"no","G/G","No",1,86.9,"XP_015840882.1:c.1449G>C","XP_015840882.1:p.Met483Ile","LOC659905",659905,null,"659905 [Gene Symbol: LOC659905] [Locus Tag: TcasGA2_TC000439] [Chromosome: LG2] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","TcasGA2_TC000439; LOC659905"]
[132,"NC_007417.3",11344935,"SNV","G","A","Homozygous",21,21,100,1,5,17,0.23,37.33,22,22,11,11,null,1,1,"no","A/A","No",1,85.5,"XP_015840722.1:c.[2683G>A]; XP_015840720.1:c.[3019G>A]; XP_015840719.1:c.[3022G>A]; XP_008201547.1:c.[3022G>A]","XP_015840722.1:p.[Val895Met]; XP_015840720.1:p.[Val1007Met]; XP_015840719.1:p.[Val1008Met]; XP_008201547.1:p.[Val1008Met]","LOC100141688",100141688,null,"100141688 [Gene Symbol: LOC100141688] [Locus Tag: TcasGA2_TC001123] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: FERM and PDZ domain-containing protein 2] [Gene Type: protein-coding]","LOC100141688; TcasGA2_TC001123"]
[133,"NC_007417.3",11409803,"SNV","T","A","Homozygous",20,20,100,1,5,15,0.25,38.35,20,20,6,9,null,1,1,"no","A/A","No",1,79.48,"XP_015840768.1:c.[3376T>A]; XP_015840769.1:c.[3331T>A]; XP_971725.1:c.[2143T>A]; XP_008201549.1:c.[2083T>A]","XP_015840768.1:p.[Leu1126Met]; XP_015840769.1:p.[Leu1111Met]; XP_971725.1:p.[Leu715Met]; XP_008201549.1:p.[Leu695Met]","LOC660401",660401,null,"660401 [Gene Symbol: LOC660401] [Locus Tag: TcasGA2_TC001126] [Chromosome: LG2] [Map Location: ] [Description: tyrosine-protein phosphatase non-receptor type 13] [Gene Type: protein-coding]","LOC660401; TcasGA2_TC001126"]
[134,"NC_007417.3",11428415,"SNV","A","T","Homozygous",24,24,100,1,8,16,0.33,39.29,24,24,8,9,null,1,1,"no","T/T","No",1,94.55,"NP_001165842.1:c.627A>T","NP_001165842.1:p.Glu209Asp","UDE",660526,"uracil-DNA degrading factor","660526 [Gene Symbol: UDE] [Locus Tag: TcasGA2_TC030651] [Chromosome: LG2] [Map Location: ] [Description: uracil-DNA degrading factor] [Gene Type: protein-coding]","UDE; TcasGA2_TC030651"]
[135,"NC_007417.3",11486310,"SNV","G","A","Homozygous",40,40,100,1,18,26,0.41,38.27,44,44,17,24,null,1,1,"no","A/A","No",1,142.56,"XP_972317.1:c.488G>A","XP_972317.1:p.Arg163Lys","LOC661035",661035,null,"661035 [Gene Symbol: LOC661035] [Locus Tag: TcasGA2_TC001136] [Chromosome: LG2] [Map Location: ] [Description: sorbitol dehydrogenase] [Gene Type: protein-coding]","TcasGA2_TC001136; LOC661035"]
[136,"NC_007417.3",11588266,"SNV","C","T","Heterozygous",6,22,27.27,1,6,0,0,34.83,6,24,1,6,-0.96,0.1,0.41,"no","C/T","No",1,28.23,"XP_015840771.1:c.[1237G>A]; XP_008201585.1:c.[1207G>A]; XP_015840775.1:c.[484G>A]; XP_015840773.1:c.[1237G>A]; XP_015840772.1:c.[1237G>A]; XP_015840774.1:c.[1237G>A]","XP_015840771.1:p.[Ala413Thr]; XP_008201585.1:p.[Ala403Thr]; XP_015840775.1:p.[Ala162Thr]; XP_015840773.1:p.[Ala413Thr]; XP_015840772.1:p.[Ala413Thr]; XP_015840774.1:p.[Ala413Thr]","LOC661711",661711,null,"661711 [Gene Symbol: LOC661711] [Locus Tag: TcasGA2_TC000419] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC661711] [Gene Type: protein-coding]","LOC661711; TcasGA2_TC000419"]
[137,"NC_007417.3",11832190,"SNV","C","T","Homozygous",21,21,100,1,10,16,0.38,38.71,26,26,7,9,null,1,1,"no","T/T","No",1,85.52,"XP_015840846.1:c.[485G>A]; XP_015840845.1:c.[485G>A]","XP_015840846.1:p.[Arg162His]; XP_015840845.1:p.[Arg162His]","LOC103315243",103315243,null,"103315243 [Gene Symbol: LOC103315243] [Locus Tag: TcasGA2_TC000409] [Chromosome: LG2] [Map Location: ] [Description: LIM and SH3 domain protein Lasp] [Gene Type: protein-coding]","TcasGA2_TC000409; LOC103315243"]
[138,"NC_007417.3",11916098,"SNV","T","C","Homozygous",31,31,100,1,15,22,0.41,37.61,37,37,10,16,null,1,1,"no","C/C","No",1,113.98,"XP_015840549.1:c.[12913A>G]; XP_015840542.1:c.[12937A>G]; XP_015840544.1:c.[12913A>G]; XP_015840543.1:c.[12937A>G]; XP_015840545.1:c.[12832A>G]; XP_015840541.1:c.[12937A>G]; XP_015840547.1:c.[12937A>G]; XP_015840548.1:c.[12808A>G]; XP_015840546.1:c.[12937A>G]","XP_015840549.1:p.[Thr4305Ala]; XP_015840542.1:p.[Thr4313Ala]; XP_015840544.1:p.[Thr4305Ala]; XP_015840543.1:p.[Thr4313Ala]; XP_015840545.1:p.[Thr4278Ala]; XP_015840541.1:p.[Thr4313Ala]; XP_015840547.1:p.[Thr4313Ala]; XP_015840548.1:p.[Thr4270Ala]; XP_015840546.1:p.[Thr4313Ala]","LOC662569",662569,null,"662569 [Gene Symbol: LOC662569] [Locus Tag: TcasGA2_TC000401] [Chromosome: LG2] [Map Location: ] [Description: fat-like cadherin-related tumor suppressor homolog] [Gene Type: protein-coding]","LOC662569; FAT; cadherin; TcasGA2_TC000401"]
[139,"NC_007417.3",11922810,"SNV","A","G","Heterozygous",13,21,61.9,1,3,13,0.19,35.54,16,29,3,8,1.63,0.29,0.91,"no","A/G","No",1,56.56,"XP_015840546.1:c.[7832T>C]; XP_015840549.1:c.[7808T>C]; XP_015840543.1:c.[7832T>C]; XP_015840548.1:c.[7703T>C]; XP_015840547.1:c.[7832T>C]; XP_015840542.1:c.[7832T>C]; XP_015840545.1:c.[7727T>C]; XP_015840544.1:c.[7808T>C]; XP_015840541.1:c.[7832T>C]","XP_015840546.1:p.[Ile2611Thr]; XP_015840549.1:p.[Ile2603Thr]; XP_015840543.1:p.[Ile2611Thr]; XP_015840548.1:p.[Ile2568Thr]; XP_015840547.1:p.[Ile2611Thr]; XP_015840542.1:p.[Ile2611Thr]; XP_015840545.1:p.[Ile2576Thr]; XP_015840544.1:p.[Ile2603Thr]; XP_015840541.1:p.[Ile2611Thr]","LOC662569",662569,null,"662569 [Gene Symbol: LOC662569] [Locus Tag: TcasGA2_TC000401] [Chromosome: LG2] [Map Location: ] [Description: fat-like cadherin-related tumor suppressor homolog] [Gene Type: protein-coding]","LOC662569; FAT; cadherin; TcasGA2_TC000401"]
[140,"NC_007417.3",12013911,"SNV","T","A","Heterozygous",6,21,28.57,1,0,6,0,39.33,6,21,2,3,-0.04,0.25,0.42,"no","A/T","No",1,30.98,"XP_973873.1:c.674A>T","XP_973873.1:p.Asp225Val","LOC662697",662697,null,"662697 [Gene Symbol: LOC662697] [Locus Tag: TcasGA2_TC000397] [Chromosome: LG2] [Map Location: ] [Description: histidine-rich glycoprotein] [Gene Type: protein-coding]","LOC662697; TcasGA2_TC000397"]
[141,"NC_007417.3",12101072,"SNV","G","C","Homozygous",24,24,100,1,16,13,0.45,36.71,29,29,9,14,null,1,1,"no","C/C","No",1,92.91,"XP_015840677.1:c.19G>C","XP_015840677.1:p.Val7Leu","LOC662758",662758,null,"662758 [Gene Symbol: LOC662758] [Locus Tag: TcasGA2_TC001157] [Chromosome: LG2] [Map Location: ] [Description: serine protease P23] [Gene Type: protein-coding]","LOC662758; TcasGA2_TC001157; P23; P24"]
[142,"NC_007417.3",12111081,"SNV","C","T","Heterozygous",5,21,23.81,0.99,0,5,0,35,5,22,1,1,-0.41,0.49,0.58,"no","C/T","No",1,18.38,"XP_008201607.1:c.203G>A","XP_008201607.1:p.Arg68Lys","LOC662815",662815,null,"662815 [Gene Symbol: LOC662815] [Locus Tag: TcasGA2_TC000395] [Chromosome: LG2] [Map Location: ] [Description: beta-1,4-glucuronyltransferase 1] [Gene Type: protein-coding]","TcasGA2_TC000395; LOC662815"]
[143,"NC_007417.3",12271437,"SNV","T","A","Heterozygous",9,20,45,1,5,5,0.5,37,10,22,5,8,-0.04,0.34,0.6,"no","A/T","No",1,72.07,"XP_974709.1:c.10A>T","XP_974709.1:p.Ile4Leu","LOC663577",663577,null,"663577 [Gene Symbol: LOC663577] [Locus Tag: TcasGA2_TC000373] [Chromosome: LG2] [Map Location: ] [Description: protein PTCD3 homolog, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC000373; LOC663577"]
[144,"NC_007417.3","12278002^12278003","Insertion","-","GCG","Heterozygous",7,20,35,1,7,0,0,40.24,7,20,2,5,5.7,0.02,0.1,"no","complex","No",1,200,"XP_974777.1:c.479_480insCGC","XP_974777.1:p.Ala160_His161insAla","LOC663648",663648,null,"663648 [Gene Symbol: LOC663648] [Locus Tag: TcasGA2_TC000369] [Chromosome: LG2] [Map Location: ] [Description: larval/pupal cuticle protein H1C] [Gene Type: protein-coding]","TcasGA2_TC000369; LOC663648"]
[145,"NC_007417.3",12281481,"SNV","C","A","Heterozygous",13,23,56.52,1,11,5,0.31,38.08,16,34,5,10,2.98,0.19,0.93,"no","A/C","No",1,79.77,"XP_015840879.1:c.[2107G>T]; XP_015840881.1:c.[1321G>T]; XP_015840880.1:c.[2107G>T]; XP_015840877.1:c.[2107G>T]; XP_015840878.1:c.[2107G>T]","XP_015840879.1:p.[Ala703Ser]; XP_015840881.1:p.[Ala441Ser]; XP_015840880.1:p.[Ala703Ser]; XP_015840877.1:p.[Ala703Ser]; XP_015840878.1:p.[Ala703Ser]","LOC103315239",103315239,null,"103315239 [Gene Symbol: LOC103315239] [Locus Tag: TcasGA2_TC000368] [Chromosome: LG2] [Map Location: ] [Description: prominin-1-A] [Gene Type: protein-coding]","TcasGA2_TC000368; LOC103315239"]
[146,"NC_007417.3",12357199,"SNV","C","G","Homozygous",22,22,100,1,2,21,0.09,37.68,23,23,5,8,null,1,1,"no","G/G","No",1,86.9,"XP_008201636.1:c.[3283G>C]; XP_015840708.1:c.[3283G>C]; XP_008201639.1:c.[3259G>C]; XP_008201638.1:c.[3283G>C]","XP_008201636.1:p.[Ala1095Pro]; XP_015840708.1:p.[Ala1095Pro]; XP_008201639.1:p.[Ala1087Pro]; XP_008201638.1:p.[Ala1095Pro]","LOC663861",663861,null,"663861 [Gene Symbol: LOC663861] [Locus Tag: TcasGA2_TC000366] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC663861] [Gene Type: protein-coding]","LOC663861; TcasGA2_TC000366"]
[147,"NC_007417.3",12367452,"SNV","G","T","Heterozygous",7,25,28,1,6,6,0.5,35.57,12,32,3,2,-1.72,0.48,1,"no","G/T","No",1,27.79,"XP_008201638.1:c.[551C>A]; XP_015840708.1:c.[551C>A]; XP_008201639.1:c.[551C>A]; XP_008201636.1:c.[551C>A]","XP_008201638.1:p.[Ala184Glu]; XP_015840708.1:p.[Ala184Glu]; XP_008201639.1:p.[Ala184Glu]; XP_008201636.1:p.[Ala184Glu]","LOC663861",663861,null,"663861 [Gene Symbol: LOC663861] [Locus Tag: TcasGA2_TC000366] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC663861] [Gene Type: protein-coding]","LOC663861; TcasGA2_TC000366"]
[148,"NC_007417.3",12367601,"SNV","G","C","Heterozygous",14,23,60.87,1,12,3,0.2,37.93,15,24,6,12,-1.01,0.94,0.92,"no","C/G","No",1,64.1,"XP_008201638.1:c.[402C>G]; XP_015840708.1:c.[402C>G]; XP_008201639.1:c.[402C>G]; XP_008201636.1:c.[402C>G]","XP_008201638.1:p.[Asp134Glu]; XP_015840708.1:p.[Asp134Glu]; XP_008201639.1:p.[Asp134Glu]; XP_008201636.1:p.[Asp134Glu]","LOC663861",663861,null,"663861 [Gene Symbol: LOC663861] [Locus Tag: TcasGA2_TC000366] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC663861] [Gene Type: protein-coding]","LOC663861; TcasGA2_TC000366"]
[149,"NC_007417.3",12393906,"SNV","G","T","Homozygous",20,20,100,1,7,14,0.33,36.45,21,21,9,8,null,1,1,"no","T/T","No",1,82.52,"XP_975061.1:c.[747G>T]; XP_008201645.1:c.[747G>T]; XP_008201644.1:c.[768G>T]; XP_008201646.1:c.[747G>T]","XP_975061.1:p.[Gln249His]; XP_008201645.1:p.[Gln249His]; XP_008201644.1:p.[Gln256His]; XP_008201646.1:p.[Gln249His]","LOC663941",663941,null,"663941 [Gene Symbol: LOC663941] [Locus Tag: TcasGA2_TC001192] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 1] [Gene Type: protein-coding]","TcasGA2_TC001192; LOC663941; Tiap1"]
[150,"NC_007417.3",12393908,"SNV","G","A","Homozygous",20,20,100,1,7,14,0.33,37.2,21,21,9,8,null,1,1,"no","A/A","No",1,82.49,"XP_008201646.1:c.[749G>A]; XP_008201644.1:c.[770G>A]; XP_008201645.1:c.[749G>A]; XP_975061.1:c.[749G>A]","XP_008201646.1:p.[Gly250Asp]; XP_008201644.1:p.[Gly257Asp]; XP_008201645.1:p.[Gly250Asp]; XP_975061.1:p.[Gly250Asp]","LOC663941",663941,null,"663941 [Gene Symbol: LOC663941] [Locus Tag: TcasGA2_TC001192] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 1] [Gene Type: protein-coding]","TcasGA2_TC001192; LOC663941; Tiap1"]
[151,"NC_007417.3",12393914,"SNV","T","C","Homozygous",20,20,100,1,7,19,0.27,36.35,26,26,6,7,null,1,1,"no","C/C","No",1,80.88,"XP_008201644.1:c.[776T>C]; XP_008201645.1:c.[755T>C]; XP_008201646.1:c.[755T>C]; XP_975061.1:c.[755T>C]","XP_008201644.1:p.[Ile259Thr]; XP_008201645.1:p.[Ile252Thr]; XP_008201646.1:p.[Ile252Thr]; XP_975061.1:p.[Ile252Thr]","LOC663941",663941,null,"663941 [Gene Symbol: LOC663941] [Locus Tag: TcasGA2_TC001192] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 1] [Gene Type: protein-coding]","TcasGA2_TC001192; LOC663941; Tiap1"]
[152,"NC_007417.3",13114328,"SNV","C","T","Homozygous",20,20,100,1,8,12,0.4,38.55,20,20,8,10,null,1,1,"no","T/T","No",1,82.52,"XP_015840704.1:c.5471C>T","XP_015840704.1:p.Thr1824Ile","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[153,"NC_007417.3","13120067..13120068","MNV","AA","CG","Homozygous",36,36,100,1,14,32,0.3,38.24,46,46,11,17,null,1,1,"no","CG/CG","No",1,200,"XP_015840552.1:c.[1146_1147delAAinsCG]; XP_015840551.1:c.[1146_1147delAAinsCG]","XP_015840552.1:p.[Ile383Val]; XP_015840551.1:p.[Ile383Val]","LOC659632",659632,null,"659632 [Gene Symbol: LOC659632] [Locus Tag: TcasGA2_TC001240] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase UHRF1] [Gene Type: protein-coding]","TcasGA2_TC001240; LOC659632"]
[154,"NC_007417.3",13120070,"SNV","C","G","Homozygous",35,36,97.22,1,8,31,0.21,37.86,39,41,8,12,null,1,1,"no","G/G","No",1,97.82,"XP_015840552.1:c.[1149C>G]; XP_015840551.1:c.[1149C>G]","XP_015840552.1:p.[Ile383Met]; XP_015840551.1:p.[Ile383Met]","LOC659632",659632,null,"659632 [Gene Symbol: LOC659632] [Locus Tag: TcasGA2_TC001240] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase UHRF1] [Gene Type: protein-coding]","TcasGA2_TC001240; LOC659632"]
[155,"NC_007417.3",13120785,"SNV","T","C","Homozygous",20,20,100,1,8,15,0.35,37.65,23,23,6,7,null,1,1,"no","C/C","No",1,80.88,"XP_015840552.1:c.[1757T>C]; XP_015840551.1:c.[1767T>C]","XP_015840552.1:p.[Leu586Pro]","LOC659632",659632,null,"659632 [Gene Symbol: LOC659632] [Locus Tag: TcasGA2_TC001240] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase UHRF1] [Gene Type: protein-coding]","TcasGA2_TC001240; LOC659632"]
[156,"NC_007417.3",13149392,"SNV","C","A","Homozygous",22,22,100,1,6,20,0.23,36.18,26,26,10,11,null,1,1,"no","A/A","No",1,88.51,"XP_971265.1:c.4720C>A","XP_971265.1:p.Pro1574Thr","LOC659906",659906,null,"659906 [Gene Symbol: LOC659906] [Locus Tag: TcasGA2_TC001242] [Chromosome: LG2] [Map Location: ] [Description: integrator complex subunit 1] [Gene Type: protein-coding]","TcasGA2_TC001242; LOC659906"]
[157,"NC_007417.3",13149815,"SNV","G","A","Homozygous",20,20,100,1,7,17,0.29,37.2,24,24,10,10,null,1,1,"no","A/A","No",1,79.48,"XP_971265.1:c.5143G>A","XP_971265.1:p.Val1715Ile","LOC659906",659906,null,"659906 [Gene Symbol: LOC659906] [Locus Tag: TcasGA2_TC001242] [Chromosome: LG2] [Map Location: ] [Description: integrator complex subunit 1] [Gene Type: protein-coding]","TcasGA2_TC001242; LOC659906"]
[158,"NC_007417.3",13212755,"SNV","A","G","Homozygous",24,26,92.31,1,19,15,0.44,36,34,37,8,12,null,1,1,"no","G/G","No",1,62.71,"XP_015840752.1:c.[160A>G]; XP_015840754.1:c.[160A>G]; XP_015840750.1:c.[160A>G]; XP_015840753.1:c.[160A>G]","XP_015840752.1:p.[Ile54Val]; XP_015840754.1:p.[Ile54Val]; XP_015840750.1:p.[Ile54Val]; XP_015840753.1:p.[Ile54Val]","LOC107399254",107399254,null,"107399254 [Gene Symbol: LOC107399254] [Locus Tag: TcasGA2_TC030252] [Chromosome: LG2] [Map Location: ] [Description: putative gustatory receptor 28b] [Gene Type: protein-coding]","TcasGA2_TC030252; TcGr164; LOC107399254"]
[159,"NC_007417.3",13288796,"SNV","C","T","Heterozygous",15,20,75,1,13,10,0.43,36.73,23,28,8,11,0.44,0.92,0.94,"no","C/T","No",1,25.28,"XP_972743.1:c.1085C>T","XP_972743.1:p.Thr362Ile","LOC661495",661495,null,"661495 [Gene Symbol: LOC661495] [Locus Tag: TcasGA2_TC001256] [Chromosome: LG2] [Map Location: ] [Description: FHA domain-containing protein DDL] [Gene Type: protein-coding]","LOC661495; TcasGA2_TC001256"]
[160,"NC_007417.3",13327819,"SNV","A","T","Homozygous",21,21,100,1,6,20,0.23,39.48,26,26,8,14,null,1,1,"no","T/T","No",1,85.52,"XP_015839603.1:c.[7110+86A>T]; XP_015840749.1:c.[1240A>T]","XP_015840749.1:p.Met414Leu","LOC661831, LOC107399253","661831 , 107399253","aminopeptidase N-like protein","661831 [Gene Symbol: LOC661831] [Locus Tag: TcasGA2_TC001259] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N-like protein] [Gene Type: protein-coding] || 107399253 [Gene Symbol: LOC107399253] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N-like] [Gene Type: protein-coding]","TcasGA2_TC001259; GLEAN_01262; LOC661831 || LOC107399253"]
[161,"NC_007417.3",13328707,"SNV","C","A","Homozygous",23,23,100,1,16,9,0.36,38.22,25,25,10,16,null,1,1,"no","A/A","No",1,91.51,"XP_015839603.1:c.[7111-533C>A]; XP_015840749.1:c.[1897C>A]","XP_015840749.1:p.Arg633Ser","LOC661831, LOC107399253","661831 , 107399253","aminopeptidase N-like protein","661831 [Gene Symbol: LOC661831] [Locus Tag: TcasGA2_TC001259] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N-like protein] [Gene Type: protein-coding] || 107399253 [Gene Symbol: LOC107399253] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N-like] [Gene Type: protein-coding]","TcasGA2_TC001259; GLEAN_01262; LOC661831 || LOC107399253"]
[162,"NC_007417.3",13390168,"SNV","G","C","Homozygous",24,24,100,1,14,13,0.48,39.46,27,27,7,18,null,1,1,"no","C/C","No",1,92.92,"XP_015840711.1:c.[253+17565C>G]; XP_015840713.1:c.[196+17565C>G]; XP_008190285.1:c.[566C>G]; XP_008190286.1:c.[211+17565C>G]","XP_008190285.1:p.Thr189Ser","LOC661960, LOC103312156","661960 , 103312156",null,"661960 [Gene Symbol: LOC661960] [Locus Tag: TcasGA2_TC000286] [Chromosome: LG2] [Map Location: ] [Description: Kv channel-interacting protein 1] [Gene Type: protein-coding] || 103312156 [Gene Symbol: LOC103312156] [Locus Tag: TcasGA2_TC000292] [Chromosome: LG2] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC661960; TcasGA2_TC000286 || TcasGA2_TC000292; LOC103312156"]
[163,"NC_007417.3",13399520,"SNV","C","G","Homozygous",20,20,100,1,16,9,0.36,37.45,25,25,10,15,null,1,1,"no","G/G","No",1,80.88,"XP_008190286.1:c.[211+8213G>C]; XP_015840713.1:c.[196+8213G>C]; XP_976415.1:c.[351G>C]; XP_015840711.1:c.[253+8213G>C]","XP_976415.1:p.Glu117Asp","LOC661960, LOC662180","661960 , 662180",null,"661960 [Gene Symbol: LOC661960] [Locus Tag: TcasGA2_TC000286] [Chromosome: LG2] [Map Location: ] [Description: Kv channel-interacting protein 1] [Gene Type: protein-coding] || 662180 [Gene Symbol: LOC662180] [Locus Tag: TcasGA2_TC000287] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662180] [Gene Type: protein-coding]","LOC661960; TcasGA2_TC000286 || TcasGA2_TC000287; LOC662180"]
[164,"NC_007417.3",14500054,"SNV","T","C","Heterozygous",16,28,57.14,1,5,15,0.25,37.94,20,37,7,7,2.67,0.28,0.8,"no","C/T","No",1,88.07,"XP_008190436.1:c.[1441A>G]; XP_008190435.1:c.[1441A>G]","XP_008190436.1:p.[Ile481Val]; XP_008190435.1:p.[Ile481Val]","LOC660159",660159,null,"660159 [Gene Symbol: LOC660159] [Locus Tag: TcasGA2_TC000221] [Chromosome: LG2] [Map Location: ] [Description: cadherin 23] [Gene Type: protein-coding]","LOC660159; TcasGA2_TC000221"]
[165,"NC_007417.3",14699311,"SNV","C","T","Homozygous",26,26,100,1,23,19,0.45,38.12,42,42,17,13,null,1,1,"no","T/T","No",1,97.56,"XP_008190450.1:c.1975G>A","XP_008190450.1:p.Asp659Asn","LOC661251",661251,null,"661251 [Gene Symbol: LOC661251] [Locus Tag: TcasGA2_TC000208] [Chromosome: LG2] [Map Location: ] [Description: putative helicase mov-10-B.1] [Gene Type: protein-coding]","TcasGA2_TC000208; LOC661251"]
[166,"NC_007418.3",527645,"SNV","C","T","Homozygous",22,22,100,1,15,11,0.42,36.09,26,26,11,20,null,1,1,"no","T/T","No",1,88.54,"XP_975869.2:c.82C>T","XP_975869.2:p.Pro28Ser","LOC660693",660693,null,"660693 [Gene Symbol: LOC660693] [Locus Tag: TcasGA2_TC032293] [Chromosome: LG3] [Map Location: ] [Description: RING finger and SPRY domain-containing protein 1] [Gene Type: protein-coding]","LOC660693; TcasGA2_TC032293"]
[167,"NC_007418.3",582862,"SNV","T","C","Homozygous",20,20,100,1,10,13,0.43,35.65,23,23,7,11,null,1,1,"no","C/C","No",1,80.87,"XP_015832997.1:c.[277A>G]; XP_015832996.1:c.[277A>G]","XP_015832997.1:p.[Thr93Ala]; XP_015832996.1:p.[Thr93Ala]","LOC662250",662250,null,"662250 [Gene Symbol: LOC662250] [Locus Tag: TcasGA2_TC003184] [Chromosome: LG3] [Map Location: ] [Description: dosage compensation regulator] [Gene Type: protein-coding]","TcasGA2_TC003184; LOC662250"]
[168,"NC_007418.3",597416,"SNV","G","A","Homozygous",25,25,100,1,12,18,0.4,37.84,30,30,11,13,null,1,1,"no","A/A","No",1,97.54,"XP_008190624.1:c.878C>T","XP_008190624.1:p.Pro293Leu","LOC662365",662365,null,"662365 [Gene Symbol: LOC662365] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC662365] [Gene Type: protein-coding]","LOC662365"]
[169,"NC_007418.3",618085,"SNV","G","C","Homozygous",22,22,100,1,8,14,0.36,37.86,22,22,6,11,null,1,1,"no","C/C","No",1,86.9,"XP_008190571.1:c.1768G>C","XP_008190571.1:p.Glu590Gln","LOC103312221",103312221,null,"103312221 [Gene Symbol: LOC103312221] [Locus Tag: TcasGA2_TC003272] [Chromosome: LG3] [Map Location: ] [Description: valine--tRNA ligase] [Gene Type: protein-coding]","LOC103312221; TcasGA2_TC003272"]
[170,"NC_007418.3",1198389,"Deletion","G","-","Homozygous",20,20,100,1,7,13,0.35,34.55,20,20,6,8,null,1,1,"no","-/-","No",1,88.98,"XP_015833074.1:c.1214delG","XP_015833074.1:p.Gly406fs","LOC656167",656167,null,"656167 [Gene Symbol: LOC656167] [Locus Tag: TcasGA2_TC003318] [Chromosome: LG3] [Map Location: ] [Description: E3 ubiquitin-protein ligase CBL] [Gene Type: protein-coding]","LOC656167; TcasGA2_TC003318"]
[171,"NC_007418.3",1255402,"SNV","G","T","Homozygous",28,28,100,1,6,25,0.19,38.89,31,31,10,13,null,1,1,"no","T/T","No",1,106.59,"XP_015833125.1:c.[5684C>A]; XP_015833123.1:c.[5828C>A]; XP_015833126.1:c.[5573C>A]; XP_015833124.1:c.[5765C>A]","XP_015833125.1:p.[Thr1895Lys]; XP_015833123.1:p.[Thr1943Lys]; XP_015833126.1:p.[Thr1858Lys]; XP_015833124.1:p.[Thr1922Lys]","LOC103312261",103312261,null,"103312261 [Gene Symbol: LOC103312261] [Locus Tag: TcasGA2_TC003135] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: uncharacterized LOC103312261] [Gene Type: protein-coding]","TcasGA2_TC003135; LOC103312261"]
[172,"NC_007418.3",1340119,"SNV","C","G","Heterozygous",17,22,77.27,0.98,12,7,0.37,35.59,19,24,9,10,-2.82,0.74,0.86,"no","C/G","No",1,16.14,"XP_969463.1:c.[1730G>C]; XP_008190658.1:c.[1730G>C]","XP_969463.1:p.[Gly577Ala]; XP_008190658.1:p.[Gly577Ala]","LOC657950",657950,null,"657950 [Gene Symbol: LOC657950] [Locus Tag: TcasGA2_TC003130] [Chromosome: LG3] [Map Location: ] [Description: TATA element modulatory factor] [Gene Type: protein-coding]","TcasGA2_TC003130; LOC657950"]
[173,"NC_007418.3",1420991,"SNV","C","A","Heterozygous",8,20,40,1,0,8,0,39.5,8,23,3,4,0.93,0.49,0.44,"no","A/C","No",1,54.63,"XP_970233.1:c.319C>A","XP_970233.1:p.Gln107Lys","LOC658780",658780,null,"658780 [Gene Symbol: LOC658780] [Locus Tag: TcasGA2_TC003334] [Chromosome: LG3] [Map Location: ] [Description: mediator of RNA polymerase II transcription subunit 23] [Gene Type: protein-coding]","LOC658780; TcasGA2_TC003334"]
[174,"NC_007418.3",3106450,"SNV","C","T","Heterozygous",13,20,65,1,2,13,0.13,39.92,15,22,4,4,2.02,0.16,0.96,"no","C/T","No",1,48.12,"XP_008200084.1:c.1301G>A","XP_008200084.1:p.Arg434His","LOC657382",657382,null,"657382 [Gene Symbol: LOC657382] [Locus Tag: TcasGA2_TC001579] [Chromosome: LG3] [Map Location: ] [Description: discoidin domain-containing receptor 2] [Gene Type: protein-coding]","TcasGA2_TC001579; LOC657382"]
[175,"NC_007418.3",3492279,"SNV","C","A","Homozygous",17,20,85,0.94,9,11,0.45,38.88,20,25,6,11,null,0.99,1,"no","A/A","No",1,12.55,"XP_015833057.1:c.[408C>A]; XP_008200067.1:c.[456C>A]; XP_015833056.1:c.[468C>A]; XP_015833055.1:c.[468C>A]; NP_001164144.1:c.[456C>A]","XP_015833057.1:p.[Asp136Glu]; XP_008200067.1:p.[Asp152Glu]; XP_015833056.1:p.[Asp156Glu]; XP_015833055.1:p.[Asp156Glu]; NP_001164144.1:p.[Asp152Glu]","Spred",656393,"sprouty-related protein with EVH-1 domain","656393 [Gene Symbol: Spred] [Locus Tag: TcasGA2_TC001559] [Chromosome: LG3] [Map Location: ] [Description: sprouty-related protein with EVH-1 domain] [Gene Type: protein-coding]","TcasGA2_TC001559; Spred"]
[176,"NC_007418.3",3497092,"SNV","G","T","Homozygous",19,22,86.36,0.84,9,10,0.47,35.58,19,22,6,7,null,0.5,0.99,"no","T/T","No",1,7.94,"XP_008200076.1:c.826C>A","XP_008200076.1:p.Pro276Thr","LOC656311, LOC107397477","656311 , 107397477",null,"656311 [Gene Symbol: LOC656311] [Locus Tag: TcasGA2_TC001572] [Chromosome: LG3] [Map Location: ] [Description: retinol dehydrogenase 11] [Gene Type: protein-coding] || 107397477 [Gene Symbol: LOC107397477] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397477] [Gene Type: ncRNA]","LOC656311; TcasGA2_TC001572 || LOC107397477"]
[177,"NC_007418.3",3726785,"SNV","G","A","Homozygous",22,22,100,1,5,22,0.19,38.09,27,27,8,12,null,1,1,"no","A/A","No",1,88.5,"XP_015833131.1:c.[1191G>A]; XP_015833130.1:c.[1191G>A]; XP_970090.1:c.[1191G>A]","XP_015833131.1:p.[Met397Ile]; XP_015833130.1:p.[Met397Ile]; XP_970090.1:p.[Met397Ile]","LOC658622",658622,null,"658622 [Gene Symbol: LOC658622] [Locus Tag: TcasGA2_TC011542] [Chromosome: LG3] [Map Location: ] [Description: ATM interactor] [Gene Type: protein-coding]","LOC658622; TcasGA2_TC011542"]
[178,"NC_007418.3",3729755,"SNV","A","G","Heterozygous",12,25,48,1,7,5,0.42,39.25,12,28,4,7,-0.35,0.14,0.58,"no","A/G","No",1,97.69,"NP_001107842.1:c.[262T>C]; XP_008200273.1:c.[262T>C]","NP_001107842.1:p.[Phe88Leu]; XP_008200273.1:p.[Phe88Leu]","Ago-2a",658698,"Argonaute-2a","658698 [Gene Symbol: Ago-2a] [Locus Tag: TcasGA2_TC011525] [Chromosome: LG3] [Map Location: ] [Description: Argonaute-2a] [Gene Type: protein-coding]","TcasGA2_TC011525; Ago-2a; Ago2A"]
[179,"NC_007418.3",3752992,"SNV","T","G","Homozygous",25,25,100,1,10,17,0.37,35.2,27,27,12,9,null,1,1,"no","G/G","No",1,95.92,"XP_008200287.1:c.391A>C","XP_008200287.1:p.Asn131His","LOC658978",658978,null,"658978 [Gene Symbol: LOC658978] [Locus Tag: TcasGA2_TC011521] [Chromosome: LG3] [Map Location: ] [Description: IQ and AAA domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC011521; LOC658978"]
[180,"NC_007418.3",4101469,"SNV","G","T","Homozygous",31,31,100,1,21,16,0.43,38.71,37,37,17,17,null,1,1,"no","T/T","No",1,112.61,"XP_015833062.1:c.306C>A","XP_015833062.1:p.His102Gln","LOC658110",658110,null,"658110 [Gene Symbol: LOC658110] [Locus Tag: TcasGA2_TC003383] [Chromosome: LG3] [Map Location: ] [Description: cuticle protein 16.5, isoform B] [Gene Type: protein-coding]","Nplp4; TcasGA2_TC003383; LOC658110"]
[181,"NC_007418.3",4170611,"SNV","G","A","Heterozygous",5,25,20,0.91,5,0,0,37.8,5,25,2,5,1.53,0.09,0.11,"no","A/G","No",1,10.34,"XP_008193804.1:c.157G>A","XP_008193804.1:p.Ala53Thr","LOC103312114",103312114,null,"103312114 [Gene Symbol: LOC103312114] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: pupal cuticle protein G1A] [Gene Type: protein-coding]","LOC103312114"]
[182,"NC_007418.3",4174140,"Deletion","T","-","Heterozygous",15,28,53.57,1,7,11,0.39,39.13,18,31,6,8,3.62,0.11,0.92,"no","-/T","Yes",3,100.61,"XP_008193791.1:c.1271delT","XP_008193791.1:p.Ser425fs","LOC657154",657154,null,"657154 [Gene Symbol: LOC657154] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: ice-structuring glycoprotein] [Gene Type: protein-coding]","LOC657154"]
[183,"NC_007418.3",4174200,"SNV","C","A","Heterozygous",8,23,34.78,1,0,8,0,40.75,8,24,1,2,2.26,0.2,0.24,"no","A/C","No",1,46.25,"XP_008193791.1:c.1331C>A","XP_008193791.1:p.Ala444Asp","LOC657154",657154,null,"657154 [Gene Symbol: LOC657154] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: ice-structuring glycoprotein] [Gene Type: protein-coding]","LOC657154"]
[184,"NC_007418.3",4190279,"SNV","G","A","Heterozygous",7,20,35,1,6,6,0.5,37.43,12,30,3,7,-0.67,0.68,0.87,"no","A/G","No",1,46.52,"XP_008193816.2:c.214G>A","XP_008193816.2:p.Gly72Ser","LOC103313135",103313135,null,"103313135 [Gene Symbol: LOC103313135] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103313135] [Gene Type: protein-coding]","LOC103313135"]
[185,"NC_007418.3","4256657..4256658","MNV","TG","CT","Heterozygous",21,32,65.62,1,21,5,0.19,38.14,26,37,10,15,-3.19,0.97,1,"no","complex","No",1,200,"XP_008190814.1:c.425_426delCAinsAG","XP_008190814.1:p.Thr142Lys","LOC103312292",103312292,null,"103312292 [Gene Symbol: LOC103312292] [Locus Tag: TcasGA2_TC003023] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312292] [Gene Type: protein-coding]","LOC103312292; TcasGA2_TC003023"]
[186,"NC_007418.3",4256688,"SNV","G","A","Heterozygous",15,24,62.5,1,14,4,0.22,37.47,18,29,9,8,1.73,0.94,0.98,"no","A/G","No",1,65.28,"XP_008190814.1:c.395C>T","XP_008190814.1:p.Ala132Val","LOC103312292",103312292,null,"103312292 [Gene Symbol: LOC103312292] [Locus Tag: TcasGA2_TC003023] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312292] [Gene Type: protein-coding]","LOC103312292; TcasGA2_TC003023"]
[187,"NC_007418.3",4775407,"SNV","G","A","Homozygous",26,26,100,1,5,23,0.18,38.65,28,28,9,11,null,1,1,"no","A/A","No",1,100.54,"XP_001812254.1:c.956C>T","XP_001812254.1:p.Thr319Ile","LOC656905",656905,null,"656905 [Gene Symbol: LOC656905] [Locus Tag: TcasGA2_TC003007] [Chromosome: LG3] [Map Location: ] [Description: SRSF protein kinase 1] [Gene Type: protein-coding]","TcasGA2_TC003007; LOC656905"]
[188,"NC_007418.3",4790033,"SNV","C","G","Homozygous",34,34,100,1,9,27,0.25,39.12,36,36,13,18,null,1,1,"no","G/G","No",1,123.01,"XP_008190864.1:c.1935G>C","XP_008190864.1:p.Leu645Phe","LOC657637",657637,null,"657637 [Gene Symbol: LOC657637] [Locus Tag: TcasGA2_TC003006] [Chromosome: LG3] [Map Location: ] [Description: lisH domain and HEAT repeat-containing protein KIAA1468 homolog] [Gene Type: protein-coding]","TcasGA2_TC003006; LOC657637"]
[189,"NC_007418.3","5007895^5007896","Insertion","-","GT","Heterozygous",13,23,56.52,1,13,2,0.13,33.14,15,25,4,11,-3.47,0.24,0.15,"no","complex","No",1,200,"XP_015833512.1:c.2926_2927insAC","XP_015833512.1:p.Ser976fs","LOC658653",658653,null,"658653 [Gene Symbol: LOC658653] [Locus Tag: TcasGA2_TC003000] [Chromosome: LG3] [Map Location: ] [Description: cubitus interruptus] [Gene Type: protein-coding]","LOC658653; Ci; TcasGA2_TC003000"]
[190,"NC_007418.3","5007896^5007897","Insertion","-","C","Heterozygous",13,23,56.52,1,13,2,0.13,34.23,15,25,3,11,-2.39,0.19,0.15,"no","-/C","No",1,75.81,"XP_015833512.1:c.2925_2926insG","XP_015833512.1:p.Ser976fs","LOC658653",658653,null,"658653 [Gene Symbol: LOC658653] [Locus Tag: TcasGA2_TC003000] [Chromosome: LG3] [Map Location: ] [Description: cubitus interruptus] [Gene Type: protein-coding]","LOC658653; Ci; TcasGA2_TC003000"]
[191,"NC_007418.3",5251353,"SNV","A","G","Homozygous",21,21,100,1,10,20,0.33,35.81,30,30,9,8,null,1,1,"no","G/G","No",1,83.89,"XP_972061.1:c.1207A>G","XP_972061.1:p.Thr403Ala","LOC660762",660762,null,"660762 [Gene Symbol: LOC660762] [Locus Tag: TcasGA2_TC003450] [Chromosome: LG3] [Map Location: ] [Description: putative serine protease K12H4.7] [Gene Type: protein-coding]","TcasGA2_TC003450; LOC660762"]
[192,"NC_007418.3",5453248,"SNV","G","T","Heterozygous",6,21,28.57,1,0,6,0,39.83,6,21,1,2,0.27,0.55,0.59,"no","G/T","No",1,26.19,"XP_008190905.1:c.150C>A","XP_008190905.1:p.Ser50Arg","LOC661754",661754,null,"661754 [Gene Symbol: LOC661754] [Locus Tag: TcasGA2_TC002977] [Chromosome: LG3] [Map Location: ] [Description: BAI1-associated protein 3] [Gene Type: protein-coding]","TcasGA2_TC002977; LOC661754"]
[193,"NC_007418.3",5486826,"SNV","T","C","Homozygous",28,28,100,1,25,3,0.11,38.96,28,28,8,16,null,1,1,"no","C/C","No",1,104.96,"XP_015833393.1:c.[2177A>G]; XP_008190908.1:c.[2288A>G]; XP_008190906.1:c.[2420A>G]; XP_008190907.1:c.[2288A>G]; XP_973061.2:c.[2456A>G]","XP_015833393.1:p.[Asn726Ser]; XP_008190908.1:p.[Asn763Ser]; XP_008190906.1:p.[Asn807Ser]; XP_008190907.1:p.[Asn763Ser]; XP_973061.2:p.[Asn819Ser]","LOC661834",661834,null,"661834 [Gene Symbol: LOC661834] [Locus Tag: TcasGA2_TC002976] [Chromosome: LG3] [Map Location: ] [Description: MKL/myocardin-like protein 2] [Gene Type: protein-coding]","TcasGA2_TC002976; LOC661834"]
[194,"NC_007418.3",5509901,"SNV","G","A","Heterozygous",16,22,72.73,1,9,10,0.47,37.81,19,25,7,9,-1,0.83,0.91,"no","A/G","No",1,29.75,"XP_015833394.1:c.[1016C>T]; XP_973143.1:c.[1016C>T]","XP_015833394.1:p.[Pro339Leu]; XP_973143.1:p.[Pro339Leu]","LOC661920",661920,null,"661920 [Gene Symbol: LOC661920] [Locus Tag: TcasGA2_TC002973] [Chromosome: LG3] [Map Location: ] [Description: 3-phosphoinositide-dependent protein kinase 1] [Gene Type: protein-coding]","TcasGA2_TC002973; LOC661920"]
[195,"NC_007418.3",5684784,"SNV","C","A","Heterozygous",5,20,25,0.99,4,5,0.44,37.2,9,27,4,3,-1,0.18,0.98,"no","A/C","No",1,19.19,"XP_008190919.2:c.474G>T","XP_008190919.2:p.Glu158Asp","LOC662435",662435,null,"662435 [Gene Symbol: LOC662435] [Locus Tag: ] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: uncharacterized LOC662435] [Gene Type: protein-coding]","LOC662435"]
[196,"NC_007418.3",5726770,"SNV","G","A","Homozygous",20,20,100,1,5,15,0.25,36.8,20,20,6,12,null,1,1,"no","A/A","No",1,82.49,"XP_015833269.1:c.[30874C>T]; XP_015833268.1:c.[30937C>T]; XP_015833270.1:c.[30937C>T]","XP_015833269.1:p.[Pro10292Ser]; XP_015833268.1:p.[Pro10313Ser]; XP_015833270.1:p.[Pro10313Ser]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[197,"NC_007418.3",5737297,"SNV","T","C","Homozygous",20,20,100,1,20,4,0.17,36.6,24,24,9,10,null,1,1,"no","C/C","No",1,80.88,"XP_015833269.1:c.[27778A>G]; XP_015833268.1:c.[27841A>G]; XP_015833270.1:c.[27841A>G]","XP_015833269.1:p.[Ile9260Val]; XP_015833268.1:p.[Ile9281Val]; XP_015833270.1:p.[Ile9281Val]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[198,"NC_007418.3",5742058,"SNV","G","T","Homozygous",21,21,100,1,7,14,0.33,38.81,21,21,5,7,null,1,1,"no","T/T","No",1,85.53,"XP_015833269.1:c.[23017C>A]; XP_015833270.1:c.[23080C>A]; XP_015833268.1:c.[23080C>A]","XP_015833269.1:p.[Leu7673Met]; XP_015833270.1:p.[Leu7694Met]; XP_015833268.1:p.[Leu7694Met]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[199,"NC_007418.3",5742063,"SNV","G","A","Homozygous",21,21,100,1,7,14,0.33,39.86,21,21,5,7,null,1,1,"no","A/A","No",1,85.49,"XP_015833269.1:c.[23012C>T]; XP_015833270.1:c.[23075C>T]; XP_015833268.1:c.[23075C>T]","XP_015833269.1:p.[Pro7671Leu]; XP_015833270.1:p.[Pro7692Leu]; XP_015833268.1:p.[Pro7692Leu]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[200,"NC_007418.3",5742066,"SNV","T","G","Homozygous",21,21,100,1,7,14,0.33,39.24,21,21,5,7,null,1,1,"no","G/G","No",1,83.89,"XP_015833268.1:c.[23072A>C]; XP_015833270.1:c.[23072A>C]; XP_015833269.1:c.[23009A>C]","XP_015833268.1:p.[Lys7691Thr]; XP_015833270.1:p.[Lys7691Thr]; XP_015833269.1:p.[Lys7670Thr]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[201,"NC_007418.3",5746245,"SNV","A","G","Homozygous",22,22,100,1,3,19,0.14,36.14,22,22,13,11,null,1,1,"no","G/G","No",1,86.89,"XP_015833269.1:c.[18830T>C]; XP_015833268.1:c.[18893T>C]; XP_015833270.1:c.[18893T>C]","XP_015833269.1:p.[Leu6277Pro]; XP_015833268.1:p.[Leu6298Pro]; XP_015833270.1:p.[Leu6298Pro]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[202,"NC_007418.3",5748138,"SNV","A","G","Homozygous",21,21,100,1,21,0,0,38.33,21,21,5,16,null,1,1,"no","G/G","No",1,83.89,"XP_015833270.1:c.[17000T>C]; XP_015833268.1:c.[17000T>C]; XP_015833269.1:c.[16937T>C]","XP_015833270.1:p.[Val5667Ala]; XP_015833268.1:p.[Val5667Ala]; XP_015833269.1:p.[Val5646Ala]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[203,"NC_007418.3",5760687,"SNV","G","A","Homozygous",20,20,100,1,12,10,0.45,39.15,22,22,9,14,null,1,1,"no","A/A","No",1,82.49,"XP_015833268.1:c.[4451C>T]; XP_015833270.1:c.[4451C>T]; XP_015833269.1:c.[4388C>T]","XP_015833268.1:p.[Thr1484Met]; XP_015833270.1:p.[Thr1484Met]; XP_015833269.1:p.[Thr1463Met]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[204,"NC_007418.3",5923125,"SNV","T","C","Homozygous",22,22,100,1,7,15,0.32,36.18,22,22,9,12,null,1,1,"no","C/C","No",1,86.89,"XP_008190954.1:c.[1918A>G]; XP_015833276.1:c.[2029A>G]","XP_008190954.1:p.[Ile640Val]; XP_015833276.1:p.[Ile677Val]","LOC100141894",100141894,null,"100141894 [Gene Symbol: LOC100141894] [Locus Tag: TcasGA2_TC002945] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100141894; TcasGA2_TC002945"]
[205,"NC_007418.3",5977777,"SNV","C","G","Homozygous",21,22,95.45,1,18,5,0.22,34.81,23,24,8,11,null,0.97,1,"no","G/G","No",1,55.26,"XP_974693.1:c.348G>C","XP_974693.1:p.Lys116Asn","LOC663561",663561,null,"663561 [Gene Symbol: LOC663561] [Locus Tag: TcasGA2_TC002942] [Chromosome: LG3] [Map Location: ] [Description: zinc transporter ZIP1] [Gene Type: protein-coding]","TcasGA2_TC002942; LOC663561"]
[206,"NC_007418.3",5981252,"SNV","G","C","Homozygous",20,20,100,1,8,15,0.35,38,23,23,8,14,null,1,1,"no","C/C","No",1,80.88,"XP_974711.1:c.[716C>G]; XP_008190957.1:c.[716C>G]","XP_974711.1:p.[Thr239Ser]; XP_008190957.1:p.[Thr239Ser]","LOC663579",663579,null,"663579 [Gene Symbol: LOC663579] [Locus Tag: TcasGA2_TC002941] [Chromosome: LG3] [Map Location: ] [Description: zinc transporter ZIP1] [Gene Type: protein-coding]","LOC663579; TcasGA2_TC002941"]
[207,"NC_007418.3",6036712,"SNV","G","A","Homozygous",21,21,100,1,10,14,0.42,37.38,24,24,9,13,null,1,1,"no","A/A","No",1,85.5,"XP_008190963.1:c.[5467G>A]; XP_008190964.1:c.[5467G>A]","XP_008190963.1:p.[Ala1823Thr]; XP_008190964.1:p.[Ala1823Thr]","LOC663739",663739,null,"663739 [Gene Symbol: LOC663739] [Locus Tag: TcasGA2_TC003500] [Chromosome: LG3] [Map Location: ] [Description: CCR4-NOT transcription complex subunit 1] [Gene Type: protein-coding]","LOC663739; CNOT1; TcasGA2_TC003500"]
[208,"NC_007418.3",6060327,"SNV","G","T","Homozygous",28,28,100,1,19,9,0.32,35.82,28,28,12,16,null,1,1,"no","T/T","No",1,106.6,"XP_008190971.1:c.62G>T","XP_008190971.1:p.Arg21Leu","LOC103312340",103312340,null,"103312340 [Gene Symbol: LOC103312340] [Locus Tag: TcasGA2_TC003503] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312340; TcasGA2_TC003503"]
[209,"NC_007418.3",6212452,"SNV","G","A","Homozygous",21,21,100,1,17,9,0.35,37.86,26,26,9,9,null,1,1,"no","A/A","No",1,85.5,"XP_015833312.1:c.[19G>A]; XP_975119.2:c.[22-268G>A]; XP_015833311.1:c.[19G>A]","XP_015833312.1:p.[Asp7Asn]; XP_015833311.1:p.[Asp7Asn]","LOC664002",664002,null,"664002 [Gene Symbol: LOC664002] [Locus Tag: TcasGA2_TC003518] [Chromosome: LG3] [Map Location: ] [Description: dual specificity protein phosphatase 22] [Gene Type: protein-coding]","LOC664002; TcasGA2_TC003518"]
[210,"NC_007418.3",6642860,"SNV","A","G","Homozygous",25,25,100,1,6,20,0.23,38.28,26,26,8,14,null,1,1,"no","G/G","No",1,95.93,"XP_015833348.1:c.347A>G","XP_015833348.1:p.Gln116Arg","LOC107397511",107397511,null,"107397511 [Gene Symbol: LOC107397511] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: supervillin] [Gene Type: protein-coding]","LOC107397511"]
[211,"NC_007418.3",6643225,"SNV","C","T","Homozygous",22,22,100,1,15,12,0.44,35.77,27,27,6,18,null,1,1,"no","T/T","No",1,88.54,"XP_015833348.1:c.712C>T","XP_015833348.1:p.Leu238Phe","LOC107397511",107397511,null,"107397511 [Gene Symbol: LOC107397511] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: supervillin] [Gene Type: protein-coding]","LOC107397511"]
[212,"NC_007418.3",7129598,"SNV","G","A","Homozygous",20,20,100,1,12,16,0.43,38.95,28,28,7,13,null,1,1,"no","A/A","No",1,82.49,"XP_008191036.1:c.[502-8841G>A]; XP_975456.1:c.[55C>T]; XP_008191037.1:c.[502-8841G>A]","XP_975456.1:p.Pro19Ser","LOC664359, LOC664352","664359 , 664352",null,"664359 [Gene Symbol: LOC664359] [Locus Tag: TcasGA2_TC003550] [Chromosome: LG3] [Map Location: ] [Description: sestrin homolog] [Gene Type: protein-coding] || 664352 [Gene Symbol: LOC664352] [Locus Tag: TcasGA2_TC002890] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC664352] [Gene Type: protein-coding]","LOC664359; TcasGA2_TC003550 || TcasGA2_TC002890; LOC664352"]
[213,"NC_007418.3","7547458..7547459","MNV","TC","CT","Homozygous",21,21,100,1,17,14,0.45,37.43,31,31,11,16,null,1,1,"no","CT/CT","No",1,200,"XP_001808147.1:c.1017_1018delGAinsAG","XP_001808147.1:p.Lys340Glu","LOC100142009",100142009,null,"100142009 [Gene Symbol: LOC100142009] [Locus Tag: TcasGA2_TC002880] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC100142009] [Gene Type: protein-coding]","LOC100142009; TcasGA2_TC002880"]
[214,"NC_007418.3",7599605,"SNV","T","C","Homozygous",22,22,100,1,16,12,0.43,35.45,28,28,8,15,null,1,1,"no","C/C","No",1,86.9,"XP_967495.1:c.3085A>G","XP_967495.1:p.Thr1029Ala","LOC655839",655839,null,"655839 [Gene Symbol: LOC655839] [Locus Tag: TcasGA2_TC002876] [Chromosome: LG3] [Map Location: ] [Description: HEAT repeat-containing protein 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC002876; LOC655839"]
[215,"NC_007418.3",8016368,"SNV","C","T","Heterozygous",7,26,26.92,1,0,7,0,39.43,7,32,3,3,0.61,0.1,0.06,"no","C/T","No",1,29.79,"XP_015833523.1:c.967G>A","XP_015833523.1:p.Val323Ile","LOC657250",657250,null,"657250 [Gene Symbol: LOC657250] [Locus Tag: TcasGA2_TC002858] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: neutral alpha-glucosidase AB] [Gene Type: protein-coding]","LOC657250; TcasGA2_TC002858"]
[216,"NC_007418.3",8050126,"SNV","A","G","Heterozygous",7,28,25,1,0,7,0,37.86,7,32,2,5,-1.54,0.09,0.18,"no","A/G","No",1,25.84,"XP_008191768.1:c.[1897A>G]; XP_015833513.1:c.[1762A>G]; XP_969029.3:c.[1942A>G]","XP_008191768.1:p.[Lys633Glu]; XP_015833513.1:p.[Lys588Glu]; XP_969029.3:p.[Lys648Glu]","LOC657478",657478,null,"657478 [Gene Symbol: LOC657478] [Locus Tag: TcasGA2_TC003582] [Chromosome: LG3] [Map Location: ] [Description: protein IWS1 homolog] [Gene Type: protein-coding]","LOC657478; TcasGA2_TC003582"]
[217,"NC_007418.3",8050129,"SNV","C","T","Heterozygous",6,28,21.43,0.93,0,6,0,34.33,6,32,1,5,-2.55,0.09,0.19,"no","C/T","No",1,11.82,"XP_008191768.1:c.[1900C>T]; XP_969029.3:c.[1945C>T]; XP_015833513.1:c.[1765C>T]","XP_008191768.1:p.[Arg634Cys]; XP_969029.3:p.[Arg649Cys]; XP_015833513.1:p.[Arg589Cys]","LOC657478",657478,null,"657478 [Gene Symbol: LOC657478] [Locus Tag: TcasGA2_TC003582] [Chromosome: LG3] [Map Location: ] [Description: protein IWS1 homolog] [Gene Type: protein-coding]","LOC657478; TcasGA2_TC003582"]
[218,"NC_007418.3",8624267,"SNV","G","A","Homozygous",26,26,100,1,11,19,0.37,38.19,30,30,11,16,null,1,1,"no","A/A","No",1,100.54,"XP_015833263.1:c.4334G>A","XP_015833263.1:p.Ser1445Asn","LOC103312614",103312614,null,"103312614 [Gene Symbol: LOC103312614] [Locus Tag: TcasGA2_TC030638] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312614] [Gene Type: protein-coding]","TcasGA2_TC030638; LOC103312614"]
[219,"NC_007418.3",8693275,"SNV","G","A","Homozygous",20,20,100,1,13,8,0.38,37.45,21,21,6,14,null,1,1,"no","A/A","No",1,82.49,"XP_970579.3:c.158G>A","XP_970579.3:p.Arg53Lys","LOC659159",659159,null,"659159 [Gene Symbol: LOC659159] [Locus Tag: TcasGA2_TC003601] [Chromosome: LG3] [Map Location: ] [Description: cx9C motif-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC003601; LOC659159"]
[220,"NC_007418.3",8694452,"SNV","G","A","Homozygous",20,20,100,1,13,10,0.43,37.7,23,23,7,14,null,1,1,"no","A/A","No",1,82.49,"XP_008191963.1:c.749G>A","XP_008191963.1:p.Arg250Lys","LOC659232",659232,null,"659232 [Gene Symbol: LOC659232] [Locus Tag: TcasGA2_TC003602] [Chromosome: LG3] [Map Location: ] [Description: GPI mannosyltransferase 1] [Gene Type: protein-coding]","LOC659232; TcasGA2_TC003602"]
[221,"NC_007418.3",8795193,"SNV","T","A","Homozygous",25,25,100,1,3,22,0.12,38.68,25,25,7,16,null,1,1,"no","A/A","No",1,97.53,"XP_008191643.1:c.173A>T","XP_008191643.1:p.His58Leu","LOC659306",659306,null,"659306 [Gene Symbol: LOC659306] [Locus Tag: TcasGA2_TC002829] [Chromosome: LG3] [Map Location: ] [Description: glycine-rich cell wall structural protein] [Gene Type: protein-coding]","TcasGA2_TC002829; LOC659306"]
[222,"NC_007418.3",8806682,"Deletion","A","-","Homozygous",22,22,100,1,8,15,0.35,37.68,23,23,10,15,null,1,1,"no","-/-","No",1,97.95,"XP_008191645.2:c.2246delT","XP_008191645.2:p.Leu749fs","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[223,"NC_007418.3",8807527,"SNV","T","G","Homozygous",22,22,100,1,11,20,0.35,36.77,31,31,9,9,null,1,1,"no","G/G","No",1,86.9,"XP_008191645.2:c.1401A>C","XP_008191645.2:p.Gln467His","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[224,"NC_007418.3",8807549,"SNV","A","G","Homozygous",24,24,100,1,12,20,0.38,37.92,32,32,9,11,null,1,1,"no","G/G","No",1,92.92,"XP_008191645.2:c.1379T>C","XP_008191645.2:p.Phe460Ser","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[225,"NC_007418.3",9149003,"SNV","A","C","Heterozygous",27,34,79.41,0.66,9,18,0.33,37.07,27,37,9,15,-0.55,0.57,1,"no","A/C","No",1,4.67,"XP_001812566.1:c.3315T>G","XP_001812566.1:p.His1105Gln","LOC100141933",100141933,null,"100141933 [Gene Symbol: LOC100141933] [Locus Tag: TcasGA2_TC030697] [Chromosome: LG3] [Map Location: ] [Description: adenylate cyclase type 2] [Gene Type: protein-coding]","LOC100141933; TcasGA2_TC030697"]
[226,"NC_007418.3",9383821,"SNV","C","A","Heterozygous",6,22,27.27,1,2,6,0.25,36.5,8,27,2,6,-0.22,0.12,0.44,"no","A/C","No",1,23.58,"XP_001813052.2:c.[317C>A]; XP_008192281.2:c.[317C>A]; XP_015833508.1:c.[317C>A]; XP_015833506.1:c.[317C>A]; XP_015833507.1:c.[317C>A]","XP_001813052.2:p.[Pro106His]; XP_008192281.2:p.[Pro106His]; XP_015833508.1:p.[Pro106His]; XP_015833506.1:p.[Pro106His]; XP_015833507.1:p.[Pro106His]","LOC103312699",103312699,null,"103312699 [Gene Symbol: LOC103312699] [Locus Tag: TcasGA2_TC003627] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: protein bric-a-brac 1-like] [Gene Type: protein-coding]","LOC103312699; TcasGA2_TC003627"]
[227,"NC_007418.3",9383843,"SNV","C","A","Heterozygous",7,21,33.33,1,7,0,0,40.29,7,24,1,7,1.19,0.13,0.43,"no","A/C","No",1,39.09,"XP_015833506.1:c.[339C>A]; XP_015833508.1:c.[339C>A]; XP_008192281.2:c.[339C>A]; XP_015833507.1:c.[339C>A]; XP_001813052.2:c.[339C>A]","XP_015833506.1:p.[Ser113Arg]; XP_015833508.1:p.[Ser113Arg]; XP_008192281.2:p.[Ser113Arg]; XP_015833507.1:p.[Ser113Arg]; XP_001813052.2:p.[Ser113Arg]","LOC103312699",103312699,null,"103312699 [Gene Symbol: LOC103312699] [Locus Tag: TcasGA2_TC003627] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: protein bric-a-brac 1-like] [Gene Type: protein-coding]","LOC103312699; TcasGA2_TC003627"]
[228,"NC_007418.3",9639417,"SNV","C","T","Homozygous",23,23,100,1,21,2,0.09,37.83,23,23,9,17,null,1,1,"no","T/T","No",1,91.55,"XP_008192372.1:c.[2674G>A]; XP_015833405.1:c.[2674G>A]; XP_015833406.1:c.[2071G>A]; XP_008192366.1:c.[2674G>A]","XP_008192372.1:p.[Val892Ile]; XP_015833405.1:p.[Val892Ile]; XP_015833406.1:p.[Val691Ile]; XP_008192366.1:p.[Val892Ile]","LOC659912",659912,null,"659912 [Gene Symbol: LOC659912] [Locus Tag: TcasGA2_TC002804] [Chromosome: LG3] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","LOC659912; TcasGA2_TC002804"]
[229,"NC_007418.3",9639420,"SNV","C","T","Homozygous",21,21,100,1,19,2,0.1,38.62,21,21,8,15,null,1,1,"no","T/T","No",1,85.52,"XP_015833405.1:c.[2671G>A]; XP_008192372.1:c.[2671G>A]; XP_015833406.1:c.[2068G>A]; XP_008192366.1:c.[2671G>A]","XP_015833405.1:p.[Gly891Arg]; XP_008192372.1:p.[Gly891Arg]; XP_015833406.1:p.[Gly690Arg]; XP_008192366.1:p.[Gly891Arg]","LOC659912",659912,null,"659912 [Gene Symbol: LOC659912] [Locus Tag: TcasGA2_TC002804] [Chromosome: LG3] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","LOC659912; TcasGA2_TC002804"]
[230,"NC_007418.3",9639513,"SNV","C","T","Homozygous",20,20,100,1,1,19,0.05,38.45,20,20,8,12,null,1,1,"no","T/T","No",1,82.52,"XP_015833405.1:c.[2578G>A]; XP_008192366.1:c.[2578G>A]; XP_008192372.1:c.[2578G>A]; XP_015833406.1:c.[1975G>A]","XP_015833405.1:p.[Ala860Thr]; XP_008192366.1:p.[Ala860Thr]; XP_008192372.1:p.[Ala860Thr]; XP_015833406.1:p.[Ala659Thr]","LOC659912",659912,null,"659912 [Gene Symbol: LOC659912] [Locus Tag: TcasGA2_TC002804] [Chromosome: LG3] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","LOC659912; TcasGA2_TC002804"]
[231,"NC_007418.3",10656717,"SNV","C","T","Homozygous",20,20,100,1,5,19,0.21,37.1,24,24,9,10,null,1,1,"no","T/T","No",1,82.52,"XP_015833472.1:c.[2993G>A]; XP_008199582.1:c.[3002G>A]","XP_015833472.1:p.[Ser998Asn]; XP_008199582.1:p.[Ser1001Asn]","LOC661398",661398,null,"661398 [Gene Symbol: LOC661398] [Locus Tag: TcasGA2_TC000140] [Chromosome: LG3] [Map Location: ] [Description: DNA replication ATP-dependent helicase/nuclease DNA2] [Gene Type: protein-coding]","LOC661398; TcasGA2_TC000140"]
[232,"NC_007418.3","10700243..10700244","MNV","TG","CA","Homozygous",20,20,100,1,13,9,0.41,37.48,22,22,9,10,null,1,1,"no","CA/CA","No",1,200,"XP_972502.1:c.882_883delCAinsTG","XP_972502.1:p.Ile295Val","LOC661234",661234,null,"661234 [Gene Symbol: LOC661234] [Locus Tag: TcasGA2_TC000138] [Chromosome: LG3] [Map Location: ] [Description: lysine-specific demethylase 8] [Gene Type: protein-coding]","TcasGA2_TC000138; LOC661234"]
[233,"NC_007418.3",10707760,"SNV","A","G","Homozygous",20,20,100,1,9,11,0.45,39.5,20,20,12,13,null,1,1,"no","G/G","No",1,80.88,"XP_972452.1:c.1987A>G","XP_972452.1:p.Thr663Ala","LOC661180",661180,null,"661180 [Gene Symbol: LOC661180] [Locus Tag: TcasGA2_TC000042] [Chromosome: LG3] [Map Location: ] [Description: probable glutamine--tRNA ligase] [Gene Type: protein-coding]","LOC661180; TcasGA2_TC000042"]
[234,"NC_007418.3","10723547..10723549","Deletion","ATC","-","Homozygous",21,21,100,1,11,10,0.48,35.9,21,21,4,8,null,1,1,"no","-/-","No",1,200,"XP_972197.1:c.296_298delATC","XP_972197.1:p.His102del","LOC660907",660907,null,"660907 [Gene Symbol: LOC660907] [Locus Tag: TcasGA2_TC000045] [Chromosome: LG3] [Map Location: ] [Description: ubiquitin-specific protease] [Gene Type: protein-coding]","LOC660907; TcasGA2_TC000045"]
[235,"NC_007418.3",10728470,"SNV","A","C","Homozygous",26,26,100,1,22,4,0.15,39.5,26,26,7,14,null,1,1,"no","C/C","No",1,98.94,"XP_972197.1:c.1222A>C","XP_972197.1:p.Thr408Pro","LOC660907",660907,null,"660907 [Gene Symbol: LOC660907] [Locus Tag: TcasGA2_TC000045] [Chromosome: LG3] [Map Location: ] [Description: ubiquitin-specific protease] [Gene Type: protein-coding]","LOC660907; TcasGA2_TC000045"]
[236,"NC_007418.3",10854345,"SNV","G","A","Homozygous",23,23,100,1,9,18,0.33,38.48,27,27,10,10,null,1,1,"no","A/A","No",1,91.51,"XP_970625.1:c.598G>A","XP_970625.1:p.Ala200Thr","LOC659205",659205,null,"659205 [Gene Symbol: LOC659205] [Locus Tag: TcasGA2_TC000060] [Chromosome: LG3] [Map Location: ] [Description: tRNA dimethylallyltransferase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC000060; LOC659205"]
[237,"NC_007418.3",11170746,"SNV","C","T","Heterozygous",9,28,32.14,1,2,7,0.22,37.89,9,32,3,4,-0.66,0.29,0.94,"no","C/T","No",1,49.75,"XP_015833486.1:c.[50-9484G>A]; XP_008199525.1:c.[50-9484G>A]; XP_015833484.1:c.[50-9484G>A]; XP_015833482.1:c.[50-9484G>A]; XP_015833483.1:c.[50-9484G>A]; XP_008199522.1:c.[50-9484G>A]; XP_015833473.1:c.[1735C>T]; XP_015833485.1:c.[50-9484G>A]; XP_008199524.1:c.[50-9484G>A]; XP_015833487.1:c.[50-9484G>A]","XP_015833473.1:p.Gln579*","LOC657135, LOC103312144","657135 , 103312144",null,"657135 [Gene Symbol: LOC657135] [Locus Tag: TcasGA2_TC000103] [Chromosome: LG3] [Map Location: ] [Description: serine/threonine-protein phosphatase 2B catalytic subunit 2] [Gene Type: protein-coding] || 103312144 [Gene Symbol: LOC103312144] [Locus Tag: TcasGA2_TC000071] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312144] [Gene Type: protein-coding]","TcasGA2_TC000103; LOC657135 || LOC103312144; TcasGA2_TC000071"]
[238,"NC_007418.3",11598779,"SNV","T","C","Homozygous",36,36,100,1,26,10,0.28,38.64,36,36,10,18,null,1,1,"no","C/C","No",1,129.02,"XP_008191098.2:c.293T>C","XP_008191098.2:p.Leu98Pro","LOC103312381",103312381,null,"103312381 [Gene Symbol: LOC103312381] [Locus Tag: TcasGA2_TC003651] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312381] [Gene Type: protein-coding]","TcasGA2_TC003651; LOC103312381"]
[239,"NC_007418.3",12876880,"SNV","G","T","Heterozygous",5,20,25,0.98,5,3,0.38,37.2,8,28,2,4,0.61,0.71,0.97,"no","G/T","No",1,16.3,"XP_008191123.1:c.[1690G>T]; XP_008191125.1:c.[1690G>T]","XP_008191123.1:p.[Asp564Tyr]; XP_008191125.1:p.[Asp564Tyr]","LOC658928",658928,null,"658928 [Gene Symbol: LOC658928] [Locus Tag: TcasGA2_TC003699] [Chromosome: LG3] [Map Location: ] [Description: vacuolar protein sorting-associated protein 8 homolog] [Gene Type: protein-coding]","LOC658928; TcasGA2_TC003699"]
[240,"NC_007418.3",12946261,"SNV","G","A","Homozygous",20,20,100,1,15,8,0.35,38.6,23,23,8,15,null,1,1,"no","A/A","No",1,82.49,"XP_015833616.1:c.759G>A","XP_015833616.1:p.Met253Ile","LOC107397550",107397550,null,"107397550 [Gene Symbol: LOC107397550] [Locus Tag: TcasGA2_TC032489] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397550] [Gene Type: protein-coding]","TcasGA2_TC032489; LOC107397550"]
[241,"NC_007418.3",13644301,"SNV","A","G","Heterozygous",5,23,21.74,0.98,3,5,0.38,37.8,8,28,2,2,0.97,0.06,0.92,"no","A/G","No",1,17.05,"XP_015833659.1:c.727A>G","XP_015833659.1:p.Ile243Val","LOC656084",656084,null,"656084 [Gene Symbol: LOC656084] [Locus Tag: TcasGA2_TC003718] [Chromosome: LG3] [Map Location: ] [Description: cilia- and flagella-associated protein 52] [Gene Type: protein-coding]","LOC656084; TcasGA2_TC003718"]
[242,"NC_007418.3","14122236..14122237","MNV","GG","AA","Heterozygous",11,26,42.31,1,7,6,0.46,39.5,13,34,7,7,1.19,0.42,0.98,"no","complex","No",1,200,"XP_015833636.1:c.274_275delGGinsAA","XP_015833636.1:p.Gly92Asn","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[243,"NC_007418.3",14122260,"SNV","A","G","Heterozygous",11,32,34.38,1,11,4,0.27,38.09,15,39,5,7,-0.3,0.52,0.97,"no","A/G","No",1,55.77,"XP_015833636.1:c.298A>G","XP_015833636.1:p.Arg100Gly","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[244,"NC_007418.3",14122266,"SNV","G","A","Heterozygous",7,31,22.58,0.99,3,6,0.33,38.43,9,41,4,3,0.33,0.34,0.3,"no","A/G","No",1,18.73,"XP_015833636.1:c.304G>A","XP_015833636.1:p.Gly102Ser","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[245,"NC_007418.3",14122272,"SNV","C","T","Heterozygous",13,33,39.39,1,13,4,0.24,37.38,17,40,9,9,-0.83,0.52,0.77,"no","C/T","No",1,86.71,"XP_015833636.1:c.310C>T","XP_015833636.1:p.Arg104Cys","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[246,"NC_007418.3","14122290..14122291","MNV","GG","AA","Heterozygous",8,38,21.05,1,4,7,0.36,40.12,11,49,5,5,3.75,0.31,0.47,"yes","complex","No",1,200,"XP_015833636.1:c.328_329delGGinsAA","XP_015833636.1:p.Gly110Asn","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[247,"NC_007418.3",14122291,"SNV","G","A","Heterozygous",12,37,32.43,1,7,5,0.42,38.83,12,46,7,8,2.61,0.62,1,"yes","complex","No",1,200,"XP_015833636.1:c.329G>A","XP_015833636.1:p.Gly110Asp","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[248,"NC_007418.3",14122327,"SNV","C","T","Heterozygous",7,24,29.17,1,4,3,0.43,40,7,29,4,4,2.79,0.16,1,"no","C/T","No",1,35.38,"XP_015833636.1:c.365C>T","XP_015833636.1:p.Pro122Leu","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[249,"NC_007418.3",14122351,"SNV","C","A","Heterozygous",10,20,50,1,7,3,0.3,38.2,10,20,6,6,-1.4,0.21,0.58,"no","A/C","No",1,79.53,"XP_015833636.1:c.389C>A","XP_015833636.1:p.Thr130Lys","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[250,"NC_007418.3",14122398,"SNV","A","G","Heterozygous",13,21,61.9,1,6,7,0.46,37.85,13,21,6,6,0.07,0.89,1,"no","A/G","No",1,56.43,"XP_015833636.1:c.436A>G","XP_015833636.1:p.Lys146Glu","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[251,"NC_007418.3",14122420,"SNV","T","C","Heterozygous",4,20,20,0.91,0,4,0,40.75,4,25,2,2,2.22,0.2,0.32,"no","C/T","No",1,10.28,"XP_015833636.1:c.458T>C","XP_015833636.1:p.Met153Thr","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[252,"NC_007418.3",14122452,"SNV","G","A","Heterozygous",8,25,32,1,0,8,0,38.5,8,30,2,5,0.32,0.86,0.29,"no","A/G","No",1,45.34,"XP_015833636.1:c.490G>A","XP_015833636.1:p.Glu164Lys","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[253,"NC_007418.3",14372125,"SNV","G","C","Homozygous",22,22,100,1,14,10,0.42,37.68,24,24,10,17,null,1,1,"no","C/C","No",1,86.9,"XP_015833657.1:c.301G>C","XP_015833657.1:p.Val101Leu","LOC658029",658029,null,"658029 [Gene Symbol: LOC658029] [Locus Tag: TcasGA2_TC032509] [Chromosome: LG3] [Map Location: ] [Description: cytochrome P450 6k1] [Gene Type: protein-coding]","LOC658029; CYP345D2; TcasGA2_TC032509"]
[254,"NC_007418.3",14372338,"SNV","A","C","Homozygous",23,23,100,1,7,19,0.27,38.65,26,26,12,10,null,1,1,"no","C/C","No",1,89.91,"XP_015833657.1:c.514A>C","XP_015833657.1:p.Lys172Gln","LOC658029",658029,null,"658029 [Gene Symbol: LOC658029] [Locus Tag: TcasGA2_TC032509] [Chromosome: LG3] [Map Location: ] [Description: cytochrome P450 6k1] [Gene Type: protein-coding]","LOC658029; CYP345D2; TcasGA2_TC032509"]
[255,"NC_007418.3",14438531,"SNV","C","T","Heterozygous",18,24,75,1,8,10,0.44,36.22,18,24,7,10,-2.03,0.69,0.85,"no","C/T","No",1,24.26,"XP_008199223.2:c.646C>T","XP_008199223.2:p.Pro216Ser","LOC100141710",100141710,null,"100141710 [Gene Symbol: LOC100141710] [Locus Tag: TcasGA2_TC010526] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: coiled-coil and C2 domain-containing protein 2A] [Gene Type: protein-coding]","TcasGA2_TC010526; LOC100141710"]
[256,"NC_007418.3",14438535,"SNV","A","G","Homozygous",25,25,100,1,14,11,0.44,38.28,25,25,8,15,null,1,1,"no","G/G","No",1,95.93,"XP_008199223.2:c.650A>G","XP_008199223.2:p.Gln217Arg","LOC100141710",100141710,null,"100141710 [Gene Symbol: LOC100141710] [Locus Tag: TcasGA2_TC010526] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: coiled-coil and C2 domain-containing protein 2A] [Gene Type: protein-coding]","TcasGA2_TC010526; LOC100141710"]
[257,"NC_007418.3",14598767,"Deletion","C","-","Heterozygous",6,26,23.08,0.98,6,0,0,35.33,6,34,1,5,-0.37,{"v":0.0084,"d":"8.40E-03"},0.18,"no","-/C","No",1,16.41,"XP_015833677.1:c.[746delG]; XP_008199229.1:c.[716delG]; XP_015833676.1:c.[863delG]; XP_008199230.1:c.[716delG]","XP_015833677.1:p.[Gly249fs]; XP_008199229.1:p.[Gly239fs]; XP_015833676.1:p.[Gly288fs]; XP_008199230.1:p.[Gly239fs]","LOC656709",656709,null,"656709 [Gene Symbol: LOC656709] [Locus Tag: TcasGA2_TC010516] [Chromosome: LG3] [Map Location: ] [Description: UNC93-like protein] [Gene Type: protein-coding]","LOC656709; TcasGA2_TC010516"]
[258,"NC_007418.3",15070095,"Deletion","C","-","Heterozygous",7,28,25,1,6,1,0.14,35.71,7,28,3,6,null,0.21,0.41,"no","complex","Yes",10,200,"XP_008199243.1:c.[1715-7274delC]; XP_015833666.1:c.[921delG]; XP_008199246.1:c.[1715-7274delC]; XP_015833665.1:c.[152-7274delC]; XP_008199244.1:c.[1715-7274delC]; XP_008199242.1:c.[1715-7274delC]; XP_008199245.1:c.[86-7274delC]; XP_008199239.2:c.[855delG]; XP_015833667.1:c.[921delG]; XP_008199240.1:c.[1715-7274delC]; XP_008199241.1:c.[1715-7274delC]; XP_008199236.2:c.[921delG]; XP_015833669.1:c.[921delG]; XP_015833670.1:c.[921delG]","XP_015833666.1:p.[*308fs]; XP_008199239.2:p.[*286fs]; XP_015833667.1:p.[*308fs]; XP_008199236.2:p.[*308fs]; XP_015833669.1:p.[*308fs]; XP_015833670.1:p.[*308fs]","LOC657292, LOC103314596","657292 , 103314596",null,"657292 [Gene Symbol: LOC657292] [Locus Tag: TcasGA2_TC010542] [Chromosome: LG3] [Map Location: ] [Description: disco-interacting protein 2] [Gene Type: protein-coding] || 103314596 [Gene Symbol: LOC103314596] [Locus Tag: TcasGA2_TC010509] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314596] [Gene Type: protein-coding]","LOC657292; TcasGA2_TC010542 || LOC103314596; TcasGA2_TC010509"]
[259,"NC_007418.3","15070095..15070096","Deletion","CC","-","Heterozygous",19,28,67.86,1,7,12,0.37,27.84,19,28,11,13,null,0.26,0.73,"no","complex","No",1,200,"XP_015833667.1:c.[920_921delGG]; XP_008199236.2:c.[920_921delGG]; XP_015833670.1:c.[920_921delGG]; XP_015833665.1:c.[152-7274_152-7273delCC]; XP_008199240.1:c.[1715-7274_1715-7273delCC]; XP_008199242.1:c.[1715-7274_1715-7273delCC]; XP_008199239.2:c.[854_855delGG]; XP_008199244.1:c.[1715-7274_1715-7273delCC]; XP_008199243.1:c.[1715-7274_1715-7273delCC]; XP_008199241.1:c.[1715-7274_1715-7273delCC]; XP_008199245.1:c.[86-7274_86-7273delCC]; XP_015833666.1:c.[920_921delGG]; XP_015833669.1:c.[920_921delGG]; XP_008199246.1:c.[1715-7274_1715-7273delCC]","XP_015833667.1:p.[Gly307fs]; XP_008199236.2:p.[Gly307fs]; XP_015833670.1:p.[Gly307fs]; XP_008199239.2:p.[Gly285fs]; XP_015833666.1:p.[Gly307fs]; XP_015833669.1:p.[Gly307fs]","LOC657292, LOC103314596","657292 , 103314596",null,"657292 [Gene Symbol: LOC657292] [Locus Tag: TcasGA2_TC010542] [Chromosome: LG3] [Map Location: ] [Description: disco-interacting protein 2] [Gene Type: protein-coding] || 103314596 [Gene Symbol: LOC103314596] [Locus Tag: TcasGA2_TC010509] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314596] [Gene Type: protein-coding]","LOC657292; TcasGA2_TC010542 || LOC103314596; TcasGA2_TC010509"]
[260,"NC_007418.3",15070115,"SNV","A","G","Heterozygous",9,31,29.03,1,0,9,0,38.56,9,32,3,5,0.44,0.43,0.23,"no","A/G","No",1,43.02,"XP_008199242.1:c.[1715-7254A>G]; XP_008199246.1:c.[1715-7254A>G]; XP_015833667.1:c.[901T>C]; XP_015833669.1:c.[901T>C]; XP_008199236.2:c.[901T>C]; XP_015833665.1:c.[152-7254A>G]; XP_008199239.2:c.[835T>C]; XP_008199244.1:c.[1715-7254A>G]; XP_015833666.1:c.[901T>C]; XP_008199243.1:c.[1715-7254A>G]; XP_008199240.1:c.[1715-7254A>G]; XP_008199241.1:c.[1715-7254A>G]; XP_008199245.1:c.[86-7254A>G]; XP_015833670.1:c.[901T>C]","XP_015833667.1:p.[Ser301Pro]; XP_015833669.1:p.[Ser301Pro]; XP_008199236.2:p.[Ser301Pro]; XP_008199239.2:p.[Ser279Pro]; XP_015833666.1:p.[Ser301Pro]; XP_015833670.1:p.[Ser301Pro]","LOC657292, LOC103314596","657292 , 103314596",null,"657292 [Gene Symbol: LOC657292] [Locus Tag: TcasGA2_TC010542] [Chromosome: LG3] [Map Location: ] [Description: disco-interacting protein 2] [Gene Type: protein-coding] || 103314596 [Gene Symbol: LOC103314596] [Locus Tag: TcasGA2_TC010509] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314596] [Gene Type: protein-coding]","LOC657292; TcasGA2_TC010542 || LOC103314596; TcasGA2_TC010509"]
[261,"NC_007418.3",15070858,"SNV","G","A","Heterozygous",5,22,22.73,0.97,2,5,0.29,36.2,7,25,3,3,-0.82,0.23,0.83,"no","A/G","No",1,15.6,"XP_015833665.1:c.[152-6511G>A]; XP_008199239.2:c.[158C>T]; XP_015833666.1:c.[158C>T]; XP_015833667.1:c.[158C>T]; XP_015833670.1:c.[158C>T]; XP_008199242.1:c.[1715-6511G>A]; XP_008199245.1:c.[86-6511G>A]; XP_008199243.1:c.[1715-6511G>A]; XP_008199241.1:c.[1715-6511G>A]; XP_008199236.2:c.[158C>T]; XP_008199246.1:c.[1715-6511G>A]; XP_008199240.1:c.[1715-6511G>A]; XP_015833669.1:c.[158C>T]; XP_008199244.1:c.[1715-6511G>A]","XP_008199239.2:p.[Ser53Leu]; XP_015833666.1:p.[Ser53Leu]; XP_015833667.1:p.[Ser53Leu]; XP_015833670.1:p.[Ser53Leu]; XP_008199236.2:p.[Ser53Leu]; XP_015833669.1:p.[Ser53Leu]","LOC657292, LOC103314596","657292 , 103314596",null,"657292 [Gene Symbol: LOC657292] [Locus Tag: TcasGA2_TC010542] [Chromosome: LG3] [Map Location: ] [Description: disco-interacting protein 2] [Gene Type: protein-coding] || 103314596 [Gene Symbol: LOC103314596] [Locus Tag: TcasGA2_TC010509] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314596] [Gene Type: protein-coding]","LOC657292; TcasGA2_TC010542 || LOC103314596; TcasGA2_TC010509"]
[262,"NC_007418.3",15449648,"SNV","G","T","Heterozygous",5,20,25,0.98,4,5,0.44,33.8,9,24,3,2,-1.44,0.03,0.79,"no","G/T","No",1,16.33,"XP_015833690.1:c.[364C>A]; XP_015833689.1:c.[364C>A]; XP_015833691.1:c.[364C>A]; XP_015833692.1:c.[364C>A]","XP_015833690.1:p.[Leu122Met]; XP_015833689.1:p.[Leu122Met]; XP_015833691.1:p.[Leu122Met]; XP_015833692.1:p.[Leu122Met]","LOC658383",658383,null,"658383 [Gene Symbol: LOC658383] [Locus Tag: TcasGA2_TC010500] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC658383] [Gene Type: protein-coding]","TcasGA2_TC010500; LOC658383"]
[263,"NC_007418.3",15818729,"SNV","T","G","Heterozygous",8,21,38.1,1,6,6,0.5,34.88,12,25,2,3,-1.3,0.58,1,"no","G/T","No",1,59.52,"XP_969665.1:c.719A>C","XP_969665.1:p.Gln240Pro","LOC658163",658163,null,"658163 [Gene Symbol: LOC658163] [Locus Tag: TcasGA2_TC000029] [Chromosome: LG3] [Map Location: ] [Description: breast cancer anti-estrogen resistance protein 1] [Gene Type: protein-coding]","LOC658163; TcasGA2_TC000029"]
[264,"NC_007418.3",15879467,"SNV","C","A","Heterozygous",5,20,25,0.98,5,5,0.5,33.8,10,29,1,3,-2.09,0.2,0.91,"no","A/C","No",1,16.48,"XP_969809.1:c.1465C>A","XP_969809.1:p.Gln489Lys","LOC658314",658314,null,"658314 [Gene Symbol: LOC658314] [Locus Tag: TcasGA2_TC000032] [Chromosome: LG3] [Map Location: ] [Description: cell division cycle protein 27 homolog] [Gene Type: protein-coding]","TcasGA2_TC000032; LOC658314"]
[265,"NC_007418.3",16679272,"SNV","G","A","Heterozygous",21,32,65.62,1,9,12,0.43,38.1,21,35,7,12,0.97,0.57,1,"no","A/G","No",1,65.74,"XP_008191268.1:c.777G>A","XP_008191268.1:p.Met259Ile","LOC659974",659974,null,"659974 [Gene Symbol: LOC659974] [Locus Tag: TcasGA2_TC002647] [Chromosome: LG3] [Map Location: ] [Description: peroxisome assembly factor 2] [Gene Type: protein-coding]","TcasGA2_TC002647; LOC659974"]
[266,"NC_007418.3",16679417,"SNV","A","T","Heterozygous",7,20,35,1,2,5,0.29,35.86,7,22,2,3,-0.52,0.5,0.62,"no","A/T","No",1,46.6,"XP_008191268.1:c.872A>T","XP_008191268.1:p.Gln291Leu","LOC659974",659974,null,"659974 [Gene Symbol: LOC659974] [Locus Tag: TcasGA2_TC002647] [Chromosome: LG3] [Map Location: ] [Description: peroxisome assembly factor 2] [Gene Type: protein-coding]","TcasGA2_TC002647; LOC659974"]
[267,"NC_007418.3",16688911,"SNV","C","A","Homozygous",20,20,100,1,17,8,0.32,38.75,25,25,9,14,null,1,1,"no","A/A","No",1,82.49,"XP_008191268.1:c.1361C>A","XP_008191268.1:p.Ala454Glu","LOC659974",659974,null,"659974 [Gene Symbol: LOC659974] [Locus Tag: TcasGA2_TC002647] [Chromosome: LG3] [Map Location: ] [Description: peroxisome assembly factor 2] [Gene Type: protein-coding]","TcasGA2_TC002647; LOC659974"]
[268,"NC_007418.3",16688917,"SNV","G","A","Homozygous",20,20,100,1,15,8,0.35,38.1,23,23,9,14,null,1,1,"no","A/A","No",1,82.49,"XP_008191268.1:c.1367G>A","XP_008191268.1:p.Arg456Lys","LOC659974",659974,null,"659974 [Gene Symbol: LOC659974] [Locus Tag: TcasGA2_TC002647] [Chromosome: LG3] [Map Location: ] [Description: peroxisome assembly factor 2] [Gene Type: protein-coding]","TcasGA2_TC002647; LOC659974"]
[269,"NC_007418.3",17579115,"SNV","G","A","Heterozygous",7,20,35,1,6,3,0.33,38.14,9,25,6,6,-0.28,0.4,1,"no","A/G","No",1,46.56,"XP_008191253.1:c.571G>A","XP_008191253.1:p.Glu191Lys","LOC103312428",103312428,null,"103312428 [Gene Symbol: LOC103312428] [Locus Tag: TcasGA2_TC002660] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15] [Gene Type: protein-coding]","TcasGA2_TC002660; LOC103312428"]
[270,"NC_007418.3",17579133,"SNV","A","G","Heterozygous",9,28,32.14,1,3,6,0.33,36,9,29,6,7,-1.89,0.45,0.67,"no","A/G","No",1,51.35,"XP_008191253.1:c.589A>G","XP_008191253.1:p.Arg197Gly","LOC103312428",103312428,null,"103312428 [Gene Symbol: LOC103312428] [Locus Tag: TcasGA2_TC002660] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15] [Gene Type: protein-coding]","TcasGA2_TC002660; LOC103312428"]
[271,"NC_007418.3",17579178,"SNV","C","T","Heterozygous",9,31,29.03,1,9,1,0.1,37.22,10,36,6,9,-0.7,0.11,0.55,"no","C/T","No",1,41.3,"XP_008191253.1:c.634C>T","XP_008191253.1:p.Arg212Trp","LOC103312428",103312428,null,"103312428 [Gene Symbol: LOC103312428] [Locus Tag: TcasGA2_TC002660] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15] [Gene Type: protein-coding]","TcasGA2_TC002660; LOC103312428"]
[272,"NC_007418.3",17584478,"SNV","A","C","Heterozygous",12,20,60,1,12,1,0.08,39.83,13,25,6,7,1.82,0.29,0.47,"no","A/C","No",1,46.27,"XP_015833805.1:c.322A>C","XP_015833805.1:p.Thr108Pro","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[273,"NC_007418.3",17584656,"SNV","C","T","Heterozygous",11,23,47.83,1,11,0,0,38.27,11,28,7,8,0.37,0.05,0.15,"no","complex","No",1,200,"XP_015833805.1:c.500C>T","XP_015833805.1:p.Ser167Phe","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[274,"NC_007418.3",17584715,"SNV","A","G","Homozygous",21,21,100,1,11,15,0.42,38.86,26,26,14,12,null,1,1,"no","G/G","No",1,83.89,"XP_015833805.1:c.559A>G","XP_015833805.1:p.Lys187Glu","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[275,"NC_007418.3",17584769,"SNV","T","A","Heterozygous",10,25,40,1,1,10,0.09,40.1,11,28,5,7,2.19,0.13,0.28,"no","A/T","No",1,70.91,"XP_015833805.1:c.613T>A","XP_015833805.1:p.Leu205Met","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[276,"NC_007418.3",17584935,"SNV","G","A","Heterozygous",12,31,38.71,1,5,9,0.36,38.75,14,38,6,7,0.43,0.59,1,"no","A/G","No",1,79.56,"XP_015833805.1:c.779G>A","XP_015833805.1:p.Arg260Lys","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[277,"NC_007418.3",17584967,"SNV","C","T","Heterozygous",13,22,59.09,1,4,13,0.24,37.46,17,33,5,6,-0.93,0.73,0.82,"no","C/T","No",1,68.12,"XP_015833805.1:c.811C>T","XP_015833805.1:p.Pro271Ser","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[278,"NC_007418.3",17584976,"SNV","C","T","Heterozygous",7,22,31.82,1,5,6,0.45,35.86,11,28,5,5,-1.41,0.69,0.75,"no","C/T","No",1,43.73,"XP_015833805.1:c.820C>T","XP_015833805.1:p.Pro274Ser","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[279,"NC_007418.3",18573388,"SNV","C","T","Heterozygous",13,23,56.52,1,13,2,0.13,37.46,15,27,7,8,0.99,0.53,0.51,"no","C/T","No",1,78.1,"XP_015833731.1:c.[533G>A]; XP_008191200.1:c.[321+212G>A]; XP_015833733.1:c.[370+163G>A]; XP_015833732.1:c.[533G>A]","XP_015833731.1:p.[Ser178Asn]; XP_015833732.1:p.[Ser178Asn]","LOC655187, LOC100142039","655187 , 100142039",null,"655187 [Gene Symbol: LOC655187] [Locus Tag: TcasGA2_TC002688] [Chromosome: LG3] [Map Location: ] [Description: D-2-hydroxyglutarate dehydrogenase, mitochondrial] [Gene Type: protein-coding] || 100142039 [Gene Symbol: LOC100142039] [Locus Tag: TcasGA2_TC003750] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC655187; TcasGA2_TC002688 || TcasGA2_TC003750; LOC100142039"]
[280,"NC_007418.3",18573441,"Deletion","C","-","Heterozygous",9,20,45,1,9,5,0.36,33.11,14,25,6,7,-0.57,0.94,0.9,"no","-/C","Yes",6,41.46,"XP_015833732.1:c.[480delG]; XP_015833731.1:c.[480delG]; XP_015833733.1:c.[370+110delG]; XP_008191200.1:c.[321+159delG]","XP_015833732.1:p.[Phe161fs]; XP_015833731.1:p.[Phe161fs]","LOC655187, LOC100142039","655187 , 100142039",null,"655187 [Gene Symbol: LOC655187] [Locus Tag: TcasGA2_TC002688] [Chromosome: LG3] [Map Location: ] [Description: D-2-hydroxyglutarate dehydrogenase, mitochondrial] [Gene Type: protein-coding] || 100142039 [Gene Symbol: LOC100142039] [Locus Tag: TcasGA2_TC003750] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC655187; TcasGA2_TC002688 || TcasGA2_TC003750; LOC100142039"]
[281,"NC_007418.3",18630991,"SNV","G","A","Homozygous",20,20,100,1,13,7,0.35,39.05,20,20,10,13,null,1,1,"no","A/A","No",1,82.49,"XP_008191197.1:c.281G>A","XP_008191197.1:p.Arg94Lys","LOC103312417",103312417,null,"103312417 [Gene Symbol: LOC103312417] [Locus Tag: TcasGA2_TC030648] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312417] [Gene Type: protein-coding]","LOC103312417; TcasGA2_TC030648"]
[282,"NC_007418.3",18695083,"SNV","C","T","Heterozygous",9,25,36,1,9,4,0.31,37,13,29,7,4,-0.54,0.45,0.85,"no","C/T","No",1,58.13,"XP_972555.3:c.12634G>A","XP_972555.3:p.Val4212Ile","LOC661291",661291,null,"661291 [Gene Symbol: LOC661291] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: midasin] [Gene Type: protein-coding]","LOC661291; Mdn1"]
[283,"NC_007418.3",19152575,"SNV","T","C","Homozygous",21,21,100,1,19,14,0.42,39.19,33,33,11,11,null,1,1,"no","C/C","No",1,83.89,"XP_015833824.1:c.[583T>C]; XP_015833825.1:c.[583T>C]; XP_015833823.1:c.[583T>C]","XP_015833824.1:p.[Cys195Arg]; XP_015833825.1:p.[Cys195Arg]; XP_015833823.1:p.[Cys195Arg]","LOC103312863",103312863,null,"103312863 [Gene Symbol: LOC103312863] [Locus Tag: TcasGA2_TC031706] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312863] [Gene Type: protein-coding]","TcasGA2_TC031706; LOC103312863"]
[284,"NC_007418.3",19294430,"SNV","C","T","Heterozygous",6,25,24,0.99,2,4,0.33,39.5,6,25,4,4,2.1,0.33,1,"no","C/T","No",1,19.85,"XP_008194485.1:c.[1541C>T]; XP_970894.2:c.[1586C>T]","XP_008194485.1:p.[Ala514Val]; XP_970894.2:p.[Ala529Val]","LOC659499",659499,null,"659499 [Gene Symbol: LOC659499] [Locus Tag: TcasGA2_TC011191] [Chromosome: LG3] [Map Location: ] [Description: relish] [Gene Type: protein-coding]","TcasGA2_TC011191; LOC659499; ird4; rel; ird"]
[285,"NC_007418.3",19297753,"SNV","A","G","Heterozygous",6,26,23.08,0.99,6,0,0,38.67,6,29,1,5,1.19,0.33,0.43,"no","A/G","No",1,18.68,"XP_970835.1:c.1039A>G","XP_970835.1:p.Ile347Val","LOC659438",659438,null,"659438 [Gene Symbol: LOC659438] [Locus Tag: TcasGA2_TC011192] [Chromosome: LG3] [Map Location: ] [Description: retinal dehydrogenase 1] [Gene Type: protein-coding]","TcasGA2_TC011192; LOC659438"]
[286,"NC_007418.3",19304659,"SNV","G","A","Heterozygous",17,44,38.64,1,7,14,0.33,37.76,21,62,6,7,2.22,0.3,0.99,"no","A/G","No",1,107.1,"XP_970641.1:c.73G>A","XP_970641.1:p.Glu25Lys","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[287,"NC_007418.3",19304710,"SNV","G","A","Heterozygous",11,26,42.31,1,2,11,0.15,38.64,13,28,4,6,-0.39,0.6,0.96,"no","A/G","No",1,80.81,"XP_970641.1:c.124G>A","XP_970641.1:p.Glu42Lys","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[288,"NC_007418.3",19670727,"SNV","G","T","Heterozygous",6,20,30,1,0,6,0,40.83,6,22,1,2,2.47,0.34,0.61,"no","G/T","No",1,28.97,"XP_969603.1:c.2281G>T","XP_969603.1:p.Asp761Tyr","LOC658099",658099,null,"658099 [Gene Symbol: LOC658099] [Locus Tag: TcasGA2_TC011200] [Chromosome: LG3] [Map Location: ] [Description: DNA replication licensing factor Mcm6] [Gene Type: protein-coding]","LOC658099; TcasGA2_TC011200"]
[289,"NC_007418.3",19766049,"SNV","A","T","Homozygous",23,23,100,1,5,18,0.22,39.26,23,23,5,7,null,1,1,"no","T/T","No",1,91.54,"XP_008197069.1:c.[1515A>T]; XP_015833907.1:c.[1515A>T]; XP_976287.1:c.[1515A>T]","XP_008197069.1:p.[Glu505Asp]; XP_015833907.1:p.[Glu505Asp]; XP_976287.1:p.[Glu505Asp]","LOC658548",658548,null,"658548 [Gene Symbol: LOC658548] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC658548] [Gene Type: protein-coding]","LOC658548"]
[290,"NC_007418.3",19856598,"SNV","A","G","Heterozygous",6,20,30,1,4,2,0.33,39.5,6,23,3,4,1.28,0.15,1,"no","A/G","No",1,35.31,"XP_008193849.1:c.[4234A>G]; XP_008193852.1:c.[4234A>G]; XP_008193846.1:c.[4234A>G]","XP_008193849.1:p.[Met1412Val]; XP_008193852.1:p.[Met1412Val]; XP_008193846.1:p.[Met1412Val]","LOC655393",655393,null,"655393 [Gene Symbol: LOC655393] [Locus Tag: TcasGA2_TC002131] [Chromosome: LG3] [Map Location: ] [Description: nucleoprotein TPR] [Gene Type: protein-coding]","Mtor; Tpr; TcasGA2_TC002131; megator; LOC655393"]
[291,"NC_007418.3",19856600,"SNV","G","A","Heterozygous",6,20,30,1,4,2,0.33,39.83,6,23,3,4,0.33,0.15,1,"no","A/G","No",1,33.74,"XP_008193846.1:c.[4236G>A]; XP_008193849.1:c.[4236G>A]; XP_008193852.1:c.[4236G>A]","XP_008193846.1:p.[Met1412Ile]; XP_008193849.1:p.[Met1412Ile]; XP_008193852.1:p.[Met1412Ile]","LOC655393",655393,null,"655393 [Gene Symbol: LOC655393] [Locus Tag: TcasGA2_TC002131] [Chromosome: LG3] [Map Location: ] [Description: nucleoprotein TPR] [Gene Type: protein-coding]","Mtor; Tpr; TcasGA2_TC002131; megator; LOC655393"]
[292,"NC_007418.3",20314892,"SNV","G","A","Homozygous",22,22,100,1,13,9,0.41,38.23,22,22,14,11,null,1,1,"no","A/A","No",1,88.5,"XP_008194039.1:c.649C>T","XP_008194039.1:p.His217Tyr","LOC100142515",100142515,null,"100142515 [Gene Symbol: LOC100142515] [Locus Tag: TcasGA2_TC002117] [Chromosome: LG3] [Map Location: ] [Description: calpain-A] [Gene Type: protein-coding]","LOC100142515; TcasGA2_TC002117"]
[293,"NC_007418.3",20381350,"SNV","C","A","Heterozygous",11,21,52.38,1,10,2,0.17,35.64,12,22,7,7,-1.27,0.7,0.99,"no","A/C","No",1,79.56,"XP_008194055.1:c.[100C>A]; XP_008194070.1:c.[746-6138G>T]; XP_015833856.1:c.[746-6138G>T]","XP_008194055.1:p.Pro34Thr","LOC657445, LOC657603","657445 , 657603",null,"657445 [Gene Symbol: LOC657445] [Locus Tag: TcasGA2_TC002113] [Chromosome: LG3] [Map Location: ] [Description: ALK tyrosine kinase receptor] [Gene Type: protein-coding] || 657603 [Gene Symbol: LOC657603] [Locus Tag: TcasGA2_TC002148] [Chromosome: LG3] [Map Location: ] [Description: inactive peptidyl-prolyl cis-trans isomerase shutdown] [Gene Type: protein-coding]","LOC657445; TcasGA2_TC002113 || LOC657603; TcasGA2_TC002148"]
[294,"NC_007418.3",20381378,"SNV","A","G","Heterozygous",13,23,56.52,1,5,10,0.33,35.92,15,25,6,8,-0.34,0.7,0.7,"no","A/G","No",1,76.42,"XP_015833856.1:c.[746-6166T>C]; XP_008194070.1:c.[746-6166T>C]; XP_008194055.1:c.[128A>G]","XP_008194055.1:p.Lys43Arg","LOC657445, LOC657603","657445 , 657603",null,"657445 [Gene Symbol: LOC657445] [Locus Tag: TcasGA2_TC002113] [Chromosome: LG3] [Map Location: ] [Description: ALK tyrosine kinase receptor] [Gene Type: protein-coding] || 657603 [Gene Symbol: LOC657603] [Locus Tag: TcasGA2_TC002148] [Chromosome: LG3] [Map Location: ] [Description: inactive peptidyl-prolyl cis-trans isomerase shutdown] [Gene Type: protein-coding]","LOC657445; TcasGA2_TC002113 || LOC657603; TcasGA2_TC002148"]
[295,"NC_007418.3",21245250,"SNV","C","A","Heterozygous",8,36,22.22,0.91,0,8,0,37,8,40,1,3,-2.44,0.15,0.47,"no","A/C","No",1,10.47,"XP_015833885.1:c.409C>A","XP_015833885.1:p.His137Asn","LOC107397619",107397619,null,"107397619 [Gene Symbol: LOC107397619] [Locus Tag: TcasGA2_TC003815] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397619] [Gene Type: protein-coding]","LOC107397619; TcasGA2_TC003815"]
[296,"NC_007418.3","21538965..21538966","MNV","CA","AT","Heterozygous",19,24,79.17,1,18,10,0.36,37.47,28,33,17,12,0.1,1,0.99,"no","complex","No",1,200,"XP_015833904.1:c.[2411_2412delTGinsAT]; XP_008191327.2:c.[2411_2412delTGinsAT]","XP_015833904.1:p.[Val804Asp]; XP_008191327.2:p.[Val804Asp]","LOC103312456",103312456,null,"103312456 [Gene Symbol: LOC103312456] [Locus Tag: TcasGA2_TC002611] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312456] [Gene Type: protein-coding]","LOC103312456; TcasGA2_TC002611"]
[297,"NC_007418.3",21552628,"SNV","G","A","Heterozygous",15,20,75,0.99,8,7,0.47,37.53,15,22,9,11,-2.31,0.93,0.98,"no","A/G","No",1,22.59,"XP_008191328.1:c.49G>A","XP_008191328.1:p.Ala17Thr","LOC103312457",103312457,null,"103312457 [Gene Symbol: LOC103312457] [Locus Tag: TcasGA2_TC003819] [Chromosome: LG3] [Map Location: ] [Description: adhesion G protein-coupled receptor E2] [Gene Type: protein-coding]","LOC103312457; TcasGA2_TC003819"]
[298,"NC_007418.3",22261396,"SNV","G","C","Heterozygous",16,20,80,0.88,7,14,0.33,39.31,21,25,6,9,-1.51,0.96,0.99,"no","C/G","No",1,9.12,"XP_008191353.1:c.1211G>C","XP_008191353.1:p.Arg404Thr","LOC656338",656338,null,"656338 [Gene Symbol: LOC656338] [Locus Tag: TcasGA2_TC003828] [Chromosome: LG3] [Map Location: ] [Description: vanin-like protein 1] [Gene Type: protein-coding]","TcasGA2_TC003828; LOC656338"]
[299,"NC_007418.3",23011420,"SNV","G","C","Homozygous",26,30,86.67,0.99,18,13,0.42,38.35,31,35,13,16,null,0.93,1,"no","C/C","No",1,19.37,"XP_015833911.1:c.1384G>C","XP_015833911.1:p.Glu462Gln","LOC107397628",107397628,null,"107397628 [Gene Symbol: LOC107397628] [Locus Tag: TcasGA2_TC032575] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397628] [Gene Type: protein-coding]","TcasGA2_TC032575; LOC107397628"]
[300,"NC_007418.3",23011472,"SNV","T","G","Heterozygous",15,30,50,1,2,15,0.12,37.8,17,32,7,8,-0.37,0.14,0.2,"no","G/T","No",1,115.34,"XP_015833911.1:c.1436T>G","XP_015833911.1:p.Phe479Cys","LOC107397628",107397628,null,"107397628 [Gene Symbol: LOC107397628] [Locus Tag: TcasGA2_TC032575] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397628] [Gene Type: protein-coding]","TcasGA2_TC032575; LOC107397628"]
[301,"NC_007418.3",23011491,"SNV","G","C","Homozygous",29,29,100,1,10,22,0.31,38.41,32,32,13,19,null,1,1,"no","C/C","No",1,107.97,"XP_015833911.1:c.1455G>C","XP_015833911.1:p.Lys485Asn","LOC107397628",107397628,null,"107397628 [Gene Symbol: LOC107397628] [Locus Tag: TcasGA2_TC032575] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397628] [Gene Type: protein-coding]","TcasGA2_TC032575; LOC107397628"]
[302,"NC_007418.3",24202536,"SNV","A","T","Heterozygous",12,21,57.14,1,12,9,0.43,38.67,21,31,7,7,-1.63,0.91,1,"no","A/T","No",1,69.28,"XP_008198962.1:c.[1132T>A]; NP_001159495.1:c.[487+434T>A]","XP_008198962.1:p.Leu378Met","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[303,"NC_007418.3",24650410,"SNV","A","G","Homozygous",24,30,80,0.72,20,15,0.43,36.33,35,41,7,15,-0.41,0.6,1,"no","G/G","No",1,5.54,"XP_971115.1:c.2414T>C","XP_971115.1:p.Val805Ala","LOC659745",659745,null,"659745 [Gene Symbol: LOC659745] [Locus Tag: TcasGA2_TC010343] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC659745] [Gene Type: protein-coding]","LOC659745; TcasGA2_TC010343"]
[304,"NC_007418.3",24666872,"SNV","C","T","Homozygous",24,24,100,1,5,24,0.17,38,29,29,7,11,null,1,1,"no","T/T","No",1,94.55,"XP_971115.1:c.470G>A","XP_971115.1:p.Arg157Lys","LOC659745",659745,null,"659745 [Gene Symbol: LOC659745] [Locus Tag: TcasGA2_TC010343] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC659745] [Gene Type: protein-coding]","LOC659745; TcasGA2_TC010343"]
[305,"NC_007418.3",25104288,"SNV","A","G","Heterozygous",12,31,38.71,1,12,1,0.08,39.75,13,36,5,12,1.58,0.06,0.11,"no","A/G","No",1,81.31,"XP_015833997.1:c.296A>G","XP_015833997.1:p.Asn99Ser","LOC103314489",103314489,null,"103314489 [Gene Symbol: LOC103314489] [Locus Tag: TcasGA2_TC010385] [Chromosome: LG3] [Map Location: ] [Description: sodium-dependent neutral amino acid transporter B(0)AT2] [Gene Type: protein-coding]","TcasGA2_TC010385; LOC103314489"]
[306,"NC_007418.3",25104998,"Deletion","A","-","Heterozygous",9,20,45,1,7,5,0.42,34.33,12,24,4,5,-1.59,0.28,1,"no","-/A","No",1,51.01,"XP_015833997.1:c.1006delA","XP_015833997.1:p.Ser336fs","LOC103314489",103314489,null,"103314489 [Gene Symbol: LOC103314489] [Locus Tag: TcasGA2_TC010385] [Chromosome: LG3] [Map Location: ] [Description: sodium-dependent neutral amino acid transporter B(0)AT2] [Gene Type: protein-coding]","TcasGA2_TC010385; LOC103314489"]
[307,"NC_007418.3","25105000..25105008","Deletion","TGTTGTGTT","-","Heterozygous",9,21,42.86,1,7,5,0.42,34.67,12,25,6,6,-4.53,0.77,0.99,"no","complex","No",1,200,"XP_015833997.1:c.1008_1016delTGTTGTGTT","XP_015833997.1:p.Val337_Phe339del","LOC103314489",103314489,null,"103314489 [Gene Symbol: LOC103314489] [Locus Tag: TcasGA2_TC010385] [Chromosome: LG3] [Map Location: ] [Description: sodium-dependent neutral amino acid transporter B(0)AT2] [Gene Type: protein-coding]","TcasGA2_TC010385; LOC103314489"]
[308,"NC_007418.3",25105251,"SNV","C","T","Heterozygous",9,33,27.27,1,3,6,0.33,36.11,9,37,4,3,-2.95,0.09,0.98,"no","C/T","No",1,35.72,"XP_015833997.1:c.1259C>T","XP_015833997.1:p.Ala420Val","LOC103314489",103314489,null,"103314489 [Gene Symbol: LOC103314489] [Locus Tag: TcasGA2_TC010385] [Chromosome: LG3] [Map Location: ] [Description: sodium-dependent neutral amino acid transporter B(0)AT2] [Gene Type: protein-coding]","TcasGA2_TC010385; LOC103314489"]
[309,"NC_007418.3",25300319,"SNV","T","C","Homozygous",20,20,100,1,11,13,0.46,38.4,24,24,9,17,null,1,1,"no","C/C","No",1,80.88,"XP_972552.3:c.988A>G","XP_972552.3:p.Met330Val","LOC661288",661288,null,"661288 [Gene Symbol: LOC661288] [Locus Tag: TcasGA2_TC010323] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC661288] [Gene Type: protein-coding]","LOC661288; TcasGA2_TC010323"]
[310,"NC_007418.3",25313576,"SNV","G","T","Heterozygous",5,20,25,0.98,5,4,0.44,35.6,9,29,3,2,-1.66,0.34,0.99,"no","G/T","No",1,16.32,"XP_008198998.1:c.[1301C>A]; XP_015834003.1:c.[1301C>A]; XP_972649.1:c.[1301C>A]; XP_015834002.1:c.[1301C>A]","XP_008198998.1:p.[Ser434*]; XP_015834003.1:p.[Ser434*]; XP_972649.1:p.[Ser434*]; XP_015834002.1:p.[Ser434*]","LOC661396",661396,null,"661396 [Gene Symbol: LOC661396] [Locus Tag: TcasGA2_TC010322] [Chromosome: LG3] [Map Location: ] [Description: splicing factor 3B subunit 3] [Gene Type: protein-coding]","LOC661396; TcasGA2_TC010322"]
[311,"NC_007418.3",25779313,"SNV","T","C","Heterozygous",6,28,21.43,0.95,6,0,0,34.17,6,30,1,6,-2.13,0.02,0.57,"no","C/T","No",1,13.3,"XP_008191401.1:c.[913A>G]; XP_008191400.1:c.[1009A>G]","XP_008191401.1:p.[Thr305Ala]; XP_008191400.1:p.[Thr337Ala]","LOC657012",657012,null,"657012 [Gene Symbol: LOC657012] [Locus Tag: TcasGA2_TC002523] [Chromosome: LG3] [Map Location: ] [Description: cyclin-dependent kinase 14] [Gene Type: protein-coding]","LOC657012; TcasGA2_TC002523"]
[312,"NC_007418.3",25908069,"SNV","A","T","Heterozygous",20,28,71.43,1,14,8,0.36,38.35,22,32,10,12,-1.02,0.99,1,"no","A/T","No",1,37.02,"XP_015834034.1:c.1506T>A","XP_015834034.1:p.Phe502Leu","LOC656565, LOC657482","656565 , 657482",null,"656565 [Gene Symbol: LOC656565] [Locus Tag: TcasGA2_TC002522] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase Src64B] [Gene Type: protein-coding] || 657482 [Gene Symbol: LOC657482] [Locus Tag: TcasGA2_TC002520] [Chromosome: LG3] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2] [Gene Type: protein-coding]","LOC656565; TcasGA2_TC002522 || TcasGA2_TC002520; LOC657482"]
[313,"NC_007418.3",25908074,"SNV","T","C","Heterozygous",8,28,28.57,1,6,3,0.33,38.75,9,31,4,4,0.03,0.59,1,"no","C/T","No",1,38.65,"XP_015834034.1:c.1501A>G","XP_015834034.1:p.Ile501Val","LOC656565, LOC657482","656565 , 657482",null,"656565 [Gene Symbol: LOC656565] [Locus Tag: TcasGA2_TC002522] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase Src64B] [Gene Type: protein-coding] || 657482 [Gene Symbol: LOC657482] [Locus Tag: TcasGA2_TC002520] [Chromosome: LG3] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2] [Gene Type: protein-coding]","LOC656565; TcasGA2_TC002522 || TcasGA2_TC002520; LOC657482"]
[314,"NC_007418.3",25908092,"SNV","A","G","Heterozygous",12,26,46.15,1,7,5,0.42,38,12,29,5,6,-1.08,0.77,1,"no","A/G","No",1,95.21,"XP_015834034.1:c.1483T>C","XP_015834034.1:p.Phe495Leu","LOC656565, LOC657482","656565 , 657482",null,"656565 [Gene Symbol: LOC656565] [Locus Tag: TcasGA2_TC002522] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase Src64B] [Gene Type: protein-coding] || 657482 [Gene Symbol: LOC657482] [Locus Tag: TcasGA2_TC002520] [Chromosome: LG3] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2] [Gene Type: protein-coding]","LOC656565; TcasGA2_TC002522 || TcasGA2_TC002520; LOC657482"]
[315,"NC_007418.3",25908255,"SNV","A","C","Heterozygous",6,27,22.22,0.99,3,3,0.5,40.17,6,31,2,4,null,0.17,0.88,"no","C/G","No",1,18.35,"XP_015834034.1:c.1320T>G","XP_015834034.1:p.Phe440Leu","LOC656565, LOC657482","656565 , 657482",null,"656565 [Gene Symbol: LOC656565] [Locus Tag: TcasGA2_TC002522] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase Src64B] [Gene Type: protein-coding] || 657482 [Gene Symbol: LOC657482] [Locus Tag: TcasGA2_TC002520] [Chromosome: LG3] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2] [Gene Type: protein-coding]","LOC656565; TcasGA2_TC002522 || TcasGA2_TC002520; LOC657482"]
[316,"NC_007418.3",25908598,"SNV","C","T","Heterozygous",7,20,35,1,3,5,0.38,35.29,8,21,5,8,-2.02,0.47,0.94,"no","complex","No",1,200,"XP_015834034.1:c.1021G>A","XP_015834034.1:p.Val341Ile","LOC656565, LOC657482","656565 , 657482",null,"656565 [Gene Symbol: LOC656565] [Locus Tag: TcasGA2_TC002522] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase Src64B] [Gene Type: protein-coding] || 657482 [Gene Symbol: LOC657482] [Locus Tag: TcasGA2_TC002520] [Chromosome: LG3] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2] [Gene Type: protein-coding]","LOC656565; TcasGA2_TC002522 || TcasGA2_TC002520; LOC657482"]
[317,"NC_007418.3",25908841,"SNV","C","T","Homozygous",18,22,81.82,0.73,7,12,0.37,37.78,19,24,8,11,2.26,0.91,1,"no","C/T","No",1,5.65,"XP_015834034.1:c.817G>A","XP_015834034.1:p.Gly273Ser","LOC656565, LOC657482","656565 , 657482",null,"656565 [Gene Symbol: LOC656565] [Locus Tag: TcasGA2_TC002522] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase Src64B] [Gene Type: protein-coding] || 657482 [Gene Symbol: LOC657482] [Locus Tag: TcasGA2_TC002520] [Chromosome: LG3] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2] [Gene Type: protein-coding]","LOC656565; TcasGA2_TC002522 || TcasGA2_TC002520; LOC657482"]
[318,"NC_007418.3",26346270,"SNV","T","C","Heterozygous",15,20,75,0.99,6,9,0.4,36.93,15,20,7,8,-0.79,0.61,0.84,"no","C/T","No",1,21.03,"XP_015834030.1:c.[1180A>G]; XP_015834033.1:c.[1180A>G]; XP_015834031.1:c.[1180A>G]; XP_015834032.1:c.[1180A>G]","XP_015834030.1:p.[Ile394Val]; XP_015834033.1:p.[Ile394Val]; XP_015834031.1:p.[Ile394Val]; XP_015834032.1:p.[Ile394Val]","LOC658718",658718,null,"658718 [Gene Symbol: LOC658718] [Locus Tag: TcasGA2_TC002505] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC658718] [Gene Type: protein-coding]","LOC658718; TcasGA2_TC002505"]
[319,"NC_007418.3",26374999,"SNV","A","G","Homozygous",22,22,100,1,15,10,0.4,36.18,25,25,13,15,null,1,1,"no","G/G","No",1,86.89,"XP_015834045.1:c.371T>C","XP_015834045.1:p.Val124Ala","LOC103312484",103312484,null,"103312484 [Gene Symbol: LOC103312484] [Locus Tag: TcasGA2_TC002502] [Chromosome: LG3] [Map Location: ] [Description: protein ABHD12B] [Gene Type: protein-coding]","LOC103312484; TcasGA2_TC002502"]
[320,"NC_007418.3",26524688,"SNV","C","T","Heterozygous",11,22,50,1,4,7,0.36,37.36,11,22,3,6,-0.56,0.25,1,"no","C/T","No",1,89.69,"NP_001092299.1:c.974G>A","NP_001092299.1:p.Arg325Lys","Th",654918,"tyrosine hydroxylase","654918 [Gene Symbol: Th] [Locus Tag: TcasGA2_TC002496] [Chromosome: LG3] [Map Location: ] [Description: tyrosine hydroxylase] [Gene Type: protein-coding]","Th; TcasGA2_TC002496"]
[321,"NC_007418.3",27438310,"SNV","G","T","Heterozygous",15,30,50,1,14,10,0.42,36.6,24,39,7,9,-2.76,0.31,0.87,"no","G/T","No",1,115.36,"XP_976216.1:c.392C>A","XP_976216.1:p.Ala131Glu","LOC656927",656927,null,"656927 [Gene Symbol: LOC656927] [Locus Tag: TcasGA2_TC002483] [Chromosome: LG3] [Map Location: ] [Description: coiled-coil domain-containing protein 86] [Gene Type: protein-coding]","LOC656927; TcasGA2_TC002483"]
[322,"NC_007418.3",27438323,"SNV","G","A","Heterozygous",15,30,50,1,11,14,0.44,35.73,25,45,7,6,-2.26,0.18,0.93,"no","A/G","No",1,112.07,"XP_976216.1:c.379C>T","XP_976216.1:p.Pro127Ser","LOC656927",656927,null,"656927 [Gene Symbol: LOC656927] [Locus Tag: TcasGA2_TC002483] [Chromosome: LG3] [Map Location: ] [Description: coiled-coil domain-containing protein 86] [Gene Type: protein-coding]","LOC656927; TcasGA2_TC002483"]
[323,"NC_007418.3",27438333,"SNV","T","G","Heterozygous",16,29,55.17,1,9,16,0.36,35.75,25,43,7,6,1.12,0.52,0.9,"no","G/T","No",1,93.29,"XP_976216.1:c.369A>C","XP_976216.1:p.Gln123His","LOC656927",656927,null,"656927 [Gene Symbol: LOC656927] [Locus Tag: TcasGA2_TC002483] [Chromosome: LG3] [Map Location: ] [Description: coiled-coil domain-containing protein 86] [Gene Type: protein-coding]","LOC656927; TcasGA2_TC002483"]
[324,"NC_007418.3",27826061,"SNV","A","C","Homozygous",21,21,100,1,14,7,0.33,37.9,21,21,9,14,null,1,1,"no","C/C","No",1,83.89,"XP_967329.1:c.259T>G","XP_967329.1:p.Ser87Ala","LOC655674",655674,null,"655674 [Gene Symbol: LOC655674] [Locus Tag: TcasGA2_TC002471] [Chromosome: LG3] [Map Location: ] [Description: sulfhydryl oxidase 2] [Gene Type: protein-coding]","TcasGA2_TC002471; LOC655674"]
[325,"NC_007418.3",27826253,"SNV","T","C","Homozygous",24,24,100,1,8,16,0.33,39.29,24,24,5,15,null,1,1,"no","C/C","No",1,92.92,"XP_967329.1:c.67A>G","XP_967329.1:p.Ile23Val","LOC655674",655674,null,"655674 [Gene Symbol: LOC655674] [Locus Tag: TcasGA2_TC002471] [Chromosome: LG3] [Map Location: ] [Description: sulfhydryl oxidase 2] [Gene Type: protein-coding]","TcasGA2_TC002471; LOC655674"]
[326,"NC_007418.3",27964952,"SNV","T","A","Homozygous",23,23,100,1,15,10,0.4,39.39,25,25,10,15,null,1,1,"no","A/A","No",1,91.51,"XP_015834126.1:c.[693-2409T>A]; XP_015834121.1:c.[692+57176T>A]; XP_015834138.1:c.[693-34353T>A]; XP_015834137.1:c.[693-9614T>A]; XP_015834125.1:c.[693-39075T>A]; XP_015834129.1:c.[693-5180T>A]; XP_015834143.1:c.[693-12055T>A]; XP_015834130.1:c.[693-42952T>A]; XP_015834123.1:c.[693-46419T>A]; XP_015834163.1:c.[693-2409T>A]; XP_015834115.1:c.[693-53439T>A]; XP_015834127.1:c.[693-22662T>A]; XP_015834134.1:c.[822T>A]; XP_015834152.1:c.[693-19611T>A]; XP_015834156.1:c.[693-15341T>A]; XP_015834157.1:c.[693-14330T>A]; XP_015834114.1:c.[693-30277T>A]; XP_015834140.1:c.[693-18089T>A]; XP_015834124.1:c.[693-25738T>A]; XP_015834116.1:c.[693-49933T>A]; XP_015834162.1:c.[693-36667T>A]; XP_015834131.1:c.[693-7568T>A]","XP_015834134.1:p.Asn274Lys","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[327,"NC_007418.3",27965190,"SNV","T","G","Homozygous",18,20,90,1,5,15,0.25,36.39,20,22,7,7,null,0.91,1,"no","G/G","No",1,23.07,"XP_015834162.1:c.[693-36429T>G]; XP_015834115.1:c.[693-53201T>G]; XP_015834152.1:c.[693-19373T>G]; XP_015834140.1:c.[693-17851T>G]; XP_015834129.1:c.[693-4942T>G]; XP_015834123.1:c.[693-46181T>G]; XP_015834124.1:c.[693-25500T>G]; XP_015834114.1:c.[693-30039T>G]; XP_015834130.1:c.[693-42714T>G]; XP_015834131.1:c.[693-7330T>G]; XP_015834143.1:c.[693-11817T>G]; XP_015834163.1:c.[693-2171T>G]; XP_015834116.1:c.[693-49695T>G]; XP_015834127.1:c.[693-22424T>G]; XP_015834126.1:c.[693-2171T>G]; XP_015834125.1:c.[693-38837T>G]; XP_015834134.1:c.[1060T>G]; XP_015834156.1:c.[693-15103T>G]; XP_015834137.1:c.[693-9376T>G]; XP_015834138.1:c.[693-34115T>G]; XP_015834157.1:c.[693-14092T>G]; XP_015834121.1:c.[692+57414T>G]","XP_015834134.1:p.Leu354Val","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[328,"NC_007418.3",27965721,"SNV","C","T","Heterozygous",5,23,21.74,0.95,5,0,0,40.6,5,28,1,4,1.98,0.02,0.26,"no","C/T","No",1,12.89,"XP_015834157.1:c.[693-13561C>T]; XP_015834156.1:c.[693-14572C>T]; XP_015834140.1:c.[693-17320C>T]; XP_015834163.1:c.[693-1640C>T]; XP_015834130.1:c.[693-42183C>T]; XP_015834125.1:c.[693-38306C>T]; XP_015834124.1:c.[693-24969C>T]; XP_015834143.1:c.[693-11286C>T]; XP_015834126.1:c.[693-1640C>T]; XP_015834129.1:c.[693-4411C>T]; XP_015834116.1:c.[693-49164C>T]; XP_015834127.1:c.[693-21893C>T]; XP_015834123.1:c.[693-45650C>T]; XP_015834152.1:c.[693-18842C>T]; XP_015834131.1:c.[693-6799C>T]; XP_015834115.1:c.[693-52670C>T]; XP_015834114.1:c.[693-29508C>T]; XP_015834121.1:c.[692+57945C>T]; XP_015834162.1:c.[693-35898C>T]; XP_015834137.1:c.[693-8845C>T]; XP_015834134.1:c.[1457C>T]; XP_015834138.1:c.[693-33584C>T]","XP_015834134.1:p.Ser486Phe","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[329,"NC_007418.3",27965724,"SNV","C","T","Homozygous",21,21,100,1,15,10,0.4,38.62,25,25,9,14,null,1,1,"no","T/T","No",1,85.53,"XP_015834152.1:c.[693-18839C>T]; XP_015834116.1:c.[693-49161C>T]; XP_015834115.1:c.[693-52667C>T]; XP_015834123.1:c.[693-45647C>T]; XP_015834125.1:c.[693-38303C>T]; XP_015834134.1:c.[1460C>T]; XP_015834131.1:c.[693-6796C>T]; XP_015834130.1:c.[693-42180C>T]; XP_015834126.1:c.[693-1637C>T]; XP_015834156.1:c.[693-14569C>T]; XP_015834157.1:c.[693-13558C>T]; XP_015834163.1:c.[693-1637C>T]; XP_015834137.1:c.[693-8842C>T]; XP_015834140.1:c.[693-17317C>T]; XP_015834121.1:c.[692+57948C>T]; XP_015834162.1:c.[693-35895C>T]; XP_015834138.1:c.[693-33581C>T]; XP_015834114.1:c.[693-29505C>T]; XP_015834124.1:c.[693-24966C>T]; XP_015834127.1:c.[693-21890C>T]; XP_015834143.1:c.[693-11283C>T]; XP_015834129.1:c.[693-4408C>T]","XP_015834134.1:p.Thr487Ile","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[330,"NC_007418.3","27965815..27965816","MNV","AT","GC","Heterozygous",15,20,75,1,4,12,0.25,35.77,16,21,7,9,-4,0.94,0.97,"no","complex","No",1,200,"XP_015834124.1:c.[693-24875_693-24874delATinsGC]; XP_015834140.1:c.[693-17226_693-17225delATinsGC]; XP_015834152.1:c.[693-18748_693-18747delATinsGC]; XP_015834134.1:c.[1551_1552delATinsGC]; XP_015834143.1:c.[693-11192_693-11191delATinsGC]; XP_015834125.1:c.[693-38212_693-38211delATinsGC]; XP_015834156.1:c.[693-14478_693-14477delATinsGC]; XP_015834138.1:c.[693-33490_693-33489delATinsGC]; XP_015834130.1:c.[693-42089_693-42088delATinsGC]; XP_015834129.1:c.[693-4317_693-4316delATinsGC]; XP_015834157.1:c.[693-13467_693-13466delATinsGC]; XP_015834126.1:c.[693-1546_693-1545delATinsGC]; XP_015834163.1:c.[693-1546_693-1545delATinsGC]; XP_015834127.1:c.[693-21799_693-21798delATinsGC]; XP_015834131.1:c.[693-6705_693-6704delATinsGC]; XP_015834114.1:c.[693-29414_693-29413delATinsGC]; XP_015834116.1:c.[693-49070_693-49069delATinsGC]; XP_015834115.1:c.[693-52576_693-52575delATinsGC]; XP_015834162.1:c.[693-35804_693-35803delATinsGC]; XP_015834123.1:c.[693-45556_693-45555delATinsGC]; XP_015834121.1:c.[692+58039_692+58040delATinsGC]; XP_015834137.1:c.[693-8751_693-8750delATinsGC]","XP_015834134.1:p.Cys518Arg","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[331,"NC_007418.3",28612224,"SNV","G","C","Heterozygous",9,20,45,1,9,2,0.18,39.44,11,22,5,5,0.91,0.1,0.22,"no","C/G","No",1,72.71,"XP_973222.1:c.585G>C","XP_973222.1:p.Gln195His","LOC662003",662003,null,"662003 [Gene Symbol: LOC662003] [Locus Tag: TcasGA2_TC002416] [Chromosome: LG3] [Map Location: ] [Description: protein lin-7 homolog C] [Gene Type: protein-coding]","LOC662003; TcasGA2_TC002416"]
[332,"NC_007418.3",28963146,"SNV","T","G","Heterozygous",15,20,75,0.98,6,14,0.3,37.33,20,27,7,6,1.83,0.75,1,"no","G/T","No",1,16.33,"XP_008191497.1:c.[1035A>C]; XP_972063.1:c.[1206A>C]","XP_008191497.1:p.[Glu345Asp]; XP_972063.1:p.[Glu402Asp]","LOC660764",660764,null,"660764 [Gene Symbol: LOC660764] [Locus Tag: TcasGA2_TC003991] [Chromosome: LG3] [Map Location: ] [Description: Gram-negative bacteria binding protein 3] [Gene Type: protein-coding]","TcasGA2_TC003991; GNBP; GNBP3; LOC660764"]
[333,"NC_007418.3",29018293,"SNV","A","G","Heterozygous",16,22,72.73,1,8,9,0.47,36.62,17,27,7,9,-0.77,0.63,1,"no","A/G","No",1,28.2,"XP_015834189.1:c.[39944T>C]; XP_015834200.1:c.[28526T>C]; XP_015834194.1:c.[39956T>C]; XP_015834198.1:c.[39956T>C]; XP_015834201.1:c.[39956T>C]; XP_015834192.1:c.[39956T>C]; XP_015834202.1:c.[36304+4012T>C]; XP_015834196.1:c.[32549T>C]; XP_015834190.1:c.[39851T>C]; XP_015834195.1:c.[37340T>C]; XP_015834197.1:c.[36304+4012T>C]; XP_015834191.1:c.[39596T>C]; XP_015834199.1:c.[28544T>C]","XP_015834189.1:p.[Ile13315Thr]; XP_015834200.1:p.[Ile9509Thr]; XP_015834194.1:p.[Ile13319Thr]; XP_015834198.1:p.[Ile13319Thr]; XP_015834201.1:p.[Ile13319Thr]; XP_015834192.1:p.[Ile13319Thr]; XP_015834196.1:p.[Ile10850Thr]; XP_015834190.1:p.[Ile13284Thr]; XP_015834195.1:p.[Ile12447Thr]; XP_015834191.1:p.[Ile13199Thr]; XP_015834199.1:p.[Ile9515Thr]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[334,"NC_007418.3",29028947,"SNV","G","T","Homozygous",20,20,100,1,11,12,0.48,38.85,23,23,10,10,null,1,1,"no","T/T","No",1,82.52,"XP_015834189.1:c.[31185C>A]; XP_015834201.1:c.[31197C>A]; XP_015834200.1:c.[19767C>A]; XP_015834202.1:c.[31197C>A]; XP_015834192.1:c.[31197C>A]; XP_015834199.1:c.[19785C>A]; XP_015834196.1:c.[25838-2180C>A]; XP_015834191.1:c.[30837C>A]; XP_015834198.1:c.[31197C>A]; XP_015834194.1:c.[31197C>A]; XP_015834190.1:c.[31092C>A]; XP_015834195.1:c.[28581C>A]; XP_015834197.1:c.[31197C>A]","XP_015834189.1:p.[His10395Gln]; XP_015834201.1:p.[His10399Gln]; XP_015834200.1:p.[His6589Gln]; XP_015834202.1:p.[His10399Gln]; XP_015834192.1:p.[His10399Gln]; XP_015834199.1:p.[His6595Gln]; XP_015834191.1:p.[His10279Gln]; XP_015834198.1:p.[His10399Gln]; XP_015834194.1:p.[His10399Gln]; XP_015834190.1:p.[His10364Gln]; XP_015834195.1:p.[His9527Gln]; XP_015834197.1:p.[His10399Gln]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[335,"NC_007418.3",29062367,"SNV","A","G","Heterozygous",23,29,79.31,0.88,11,14,0.44,36.22,25,31,8,9,-2.02,0.57,0.91,"no","A/G","No",1,9.23,"XP_015834202.1:c.[11123T>C]; XP_015834189.1:c.[11111T>C]; XP_015834198.1:c.[11123T>C]; XP_015834195.1:c.[8507T>C]; XP_015834191.1:c.[10763T>C]; XP_015834201.1:c.[11123T>C]; XP_015834194.1:c.[11123T>C]; XP_015834196.1:c.[11123T>C]; XP_015834197.1:c.[11123T>C]; XP_015834190.1:c.[11018T>C]; XP_015834192.1:c.[11123T>C]","XP_015834202.1:p.[Leu3708Ser]; XP_015834189.1:p.[Leu3704Ser]; XP_015834198.1:p.[Leu3708Ser]; XP_015834195.1:p.[Leu2836Ser]; XP_015834191.1:p.[Leu3588Ser]; XP_015834201.1:p.[Leu3708Ser]; XP_015834194.1:p.[Leu3708Ser]; XP_015834196.1:p.[Leu3708Ser]; XP_015834197.1:p.[Leu3708Ser]; XP_015834190.1:p.[Leu3673Ser]; XP_015834192.1:p.[Leu3708Ser]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[336,"NC_007418.3",29062371,"SNV","C","T","Homozygous",23,31,74.19,0.85,9,19,0.32,36.35,28,37,9,7,-2.72,0.62,0.76,"no","C/T","No",1,8.16,"XP_015834194.1:c.[11119G>A]; XP_015834196.1:c.[11119G>A]; XP_015834191.1:c.[10759G>A]; XP_015834202.1:c.[11119G>A]; XP_015834197.1:c.[11119G>A]; XP_015834198.1:c.[11119G>A]; XP_015834189.1:c.[11107G>A]; XP_015834195.1:c.[8503G>A]; XP_015834201.1:c.[11119G>A]; XP_015834192.1:c.[11119G>A]; XP_015834190.1:c.[11014G>A]","XP_015834194.1:p.[Val3707Ile]; XP_015834196.1:p.[Val3707Ile]; XP_015834191.1:p.[Val3587Ile]; XP_015834202.1:p.[Val3707Ile]; XP_015834197.1:p.[Val3707Ile]; XP_015834198.1:p.[Val3707Ile]; XP_015834189.1:p.[Val3703Ile]; XP_015834195.1:p.[Val2835Ile]; XP_015834201.1:p.[Val3707Ile]; XP_015834192.1:p.[Val3707Ile]; XP_015834190.1:p.[Val3672Ile]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[337,"NC_007418.3",29253329,"SNV","C","A","Heterozygous",7,26,26.92,1,5,6,0.45,34.14,11,33,2,3,-3.06,0.27,0.61,"no","A/C","No",1,25.18,"XP_971273.2:c.[300G>T]; XP_015834236.1:c.[300G>T]; XP_015834237.1:c.[207G>T]; XP_008191492.1:c.[48G>T]; XP_008191490.1:c.[90G>T]; XP_008191489.1:c.[300G>T]; XP_008191488.1:c.[300G>T]","XP_971273.2:p.[Met100Ile]; XP_015834236.1:p.[Met100Ile]; XP_015834237.1:p.[Met69Ile]; XP_008191492.1:p.[Met16Ile]; XP_008191490.1:p.[Met30Ile]; XP_008191489.1:p.[Met100Ile]; XP_008191488.1:p.[Met100Ile]","LOC659914",659914,null,"659914 [Gene Symbol: LOC659914] [Locus Tag: TcasGA2_TC003983] [Chromosome: LG3] [Map Location: ] [Description: protein NDRG3] [Gene Type: protein-coding]","LOC659914; TcasGA2_TC003983"]
[338,"NC_007418.3",29531740,"SNV","C","T","Homozygous",19,20,95,1,15,5,0.25,39.11,20,21,7,15,null,1,1,"no","T/T","No",1,50.25,"XP_015834188.1:c.2044G>A","XP_015834188.1:p.Glu682Lys","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[339,"NC_007418.3",29532105,"SNV","G","A","Heterozygous",5,22,22.73,1,3,2,0.4,40.8,5,28,3,3,1.49,0.68,0.99,"no","complex","No",1,103.8,"XP_015834188.1:c.1679C>T","XP_015834188.1:p.Ser560Leu","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[340,"NC_007418.3",29532111,"SNV","A","T","Heterozygous",9,22,40.91,1,5,8,0.38,39.11,13,28,5,5,-0.1,0.17,0.83,"no","A/T","No",1,66.56,"XP_015834188.1:c.1673T>A","XP_015834188.1:p.Leu558Gln","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[341,"NC_007418.3",29532161,"SNV","C","A","Heterozygous",10,33,30.3,1,7,3,0.3,37.7,10,37,9,6,-0.78,0.12,0.3,"no","A/C","No",1,43.93,"XP_015834188.1:c.1623G>T","XP_015834188.1:p.Gln541His","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[342,"NC_007418.3",29532180,"SNV","A","G","Heterozygous",8,28,28.57,1,5,3,0.38,38,8,32,7,4,-0.05,0.47,0.68,"no","A/G","No",1,38.56,"XP_015834188.1:c.1604T>C","XP_015834188.1:p.Leu535Pro","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[343,"NC_007418.3",29532199,"SNV","C","T","Heterozygous",9,28,32.14,1,1,9,0.1,37.67,10,32,5,3,-1.35,0.08,0.54,"no","C/T","No",1,49.72,"XP_015834188.1:c.1585G>A","XP_015834188.1:p.Ala529Thr","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[344,"NC_007418.3",29532208,"SNV","C","T","Heterozygous",11,30,36.67,1,1,11,0.08,38.73,12,36,6,6,0.99,0.09,0.36,"no","C/T","No",1,69.61,"XP_015834188.1:c.1576G>A","XP_015834188.1:p.Asp526Asn","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[345,"NC_007418.3",29532244,"SNV","G","A","Heterozygous",13,31,41.94,1,6,12,0.33,38,18,37,4,4,-0.94,0.24,1,"no","A/G","No",1,92.35,"XP_015834188.1:c.1540C>T","XP_015834188.1:p.Pro514Ser","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[346,"NC_007418.3",29532262,"SNV","C","T","Heterozygous",6,21,28.57,1,6,3,0.33,37.67,9,30,4,5,0.78,0.22,0.51,"no","C/T","No",1,31.04,"XP_015834188.1:c.1522G>A","XP_015834188.1:p.Glu508Lys","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[347,"NC_007419.2",305225,"SNV","C","G","Homozygous",22,22,100,1,12,16,0.43,38.86,28,28,4,8,null,1,1,"no","G/G","No",1,86.9,"XP_008191566.1:c.128C>G","XP_008191566.1:p.Ala43Gly","LOC658657",658657,null,"658657 [Gene Symbol: LOC658657] [Locus Tag: TcasGA2_TC030714] [Chromosome: LG4] [Map Location: ] [Description: zinc finger matrin-type protein CG9776] [Gene Type: protein-coding]","TcasGA2_TC030714; LOC658657"]
[348,"NC_007419.2",507550,"SNV","A","C","Heterozygous",10,20,50,1,5,7,0.42,37.1,12,26,4,5,0.83,0.18,1,"no","A/C","No",1,79.55,"XP_968279.3:c.320T>G","XP_968279.3:p.Val107Gly","LOC656677",656677,null,"656677 [Gene Symbol: LOC656677] [Locus Tag: TcasGA2_TC007752] [Chromosome: LG4] [Map Location: ] [Description: protein stoned-B] [Gene Type: protein-coding]","LOC656677; TcasGA2_TC007752"]
[349,"NC_007419.2",981793,"SNV","C","T","Heterozygous",17,34,50,1,3,14,0.18,37.12,17,37,4,12,-0.79,0.48,1,"no","C/T","No",1,132.77,"XP_015834729.1:c.[586C>T]; XP_015834730.1:c.[586C>T]","XP_015834729.1:p.[Pro196Ser]; XP_015834730.1:p.[Pro196Ser]","LOC663614",663614,null,"663614 [Gene Symbol: LOC663614] [Locus Tag: TcasGA2_TC007819] [Chromosome: LG4] [Map Location: ] [Description: MAGUK p55 subfamily member 5-A] [Gene Type: protein-coding]","LOC663614; TcasGA2_TC007819"]
[350,"NC_007419.2","1048807^1048808","Insertion","-","G","Heterozygous",8,21,38.1,1,0,8,0,40.5,8,24,1,1,2.97,0.04,0.31,"no","-/G","No",1,58.71,"XP_008191709.1:c.648_649insG","XP_008191709.1:p.Leu217fs","LOC663740",663740,null,"663740 [Gene Symbol: LOC663740] [Locus Tag: TcasGA2_TC007824] [Chromosome: LG4] [Map Location: ] [Description: hyaluronan mediated motility receptor] [Gene Type: protein-coding]","TcasGA2_TC007824; LOC663740"]
[351,"NC_007419.2",1053523,"SNV","C","G","Homozygous",21,21,100,1,16,10,0.38,36.71,26,26,6,13,null,1,1,"no","G/G","No",1,83.88,"XP_008191710.1:c.736G>C","XP_008191710.1:p.Gly246Arg","LOC663752",663752,null,"663752 [Gene Symbol: LOC663752] [Locus Tag: TcasGA2_TC007674] [Chromosome: LG4] [Map Location: ] [Description: neurotactin] [Gene Type: protein-coding]","LOC663752; TcasGA2_TC007674"]
[352,"NC_007419.2",1086955,"SNV","C","G","Heterozygous",17,26,65.38,1,8,9,0.47,40,17,26,4,10,2.59,0.36,0.68,"no","C/G","No",1,56,"XP_008191713.1:c.[543G>C]; XP_974913.2:c.[543G>C]; XP_008191712.1:c.[543G>C]","XP_008191713.1:p.[Lys181Asn]; XP_974913.2:p.[Lys181Asn]; XP_008191712.1:p.[Lys181Asn]","LOC663785",663785,null,"663785 [Gene Symbol: LOC663785] [Locus Tag: TcasGA2_TC007672] [Chromosome: LG4] [Map Location: ] [Description: tyrosine-protein phosphatase 10D] [Gene Type: protein-coding]","LOC663785; TcasGA2_TC007672"]
[353,"NC_007419.2",1135927,"SNV","C","T","Heterozygous",6,24,25,0.99,6,0,0,34.67,6,25,2,4,-0.53,0.1,0.36,"no","C/T","No",1,22.73,"XP_975017.2:c.182C>T","XP_975017.2:p.Ser61Leu","LOC663895",663895,null,"663895 [Gene Symbol: LOC663895] [Locus Tag: TcasGA2_TC007831] [Chromosome: LG4] [Map Location: ] [Description: ets DNA-binding protein pokkuri] [Gene Type: protein-coding]","LOC663895; TcasGA2_TC007831"]
[354,"NC_007419.2",1354866,"SNV","C","T","Homozygous",48,57,84.21,1,48,4,0.08,38.04,52,64,15,31,null,0.76,0.58,"no","T/T","No",1,29.42,"XP_015834849.1:c.[3856C>T]; XP_015834850.1:c.[3829C>T]","XP_015834849.1:p.[Leu1286Phe]; XP_015834850.1:p.[Leu1277Phe]","LOC654865",654865,null,"654865 [Gene Symbol: LOC654865] [Locus Tag: TcasGA2_TC007843] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: teneurin-a] [Gene Type: protein-coding]","LOC654865; TcasGA2_TC007843"]
[355,"NC_007419.2","1587527..1587528","MNV","GT","AC","Homozygous",26,26,100,1,10,24,0.29,37.87,34,34,14,18,null,1,1,"no","AC/AC","No",1,200,"XP_967893.2:c.877_878delGTinsAC","XP_967893.2:p.Val293Thr","LOC656259",656259,null,"656259 [Gene Symbol: LOC656259] [Locus Tag: TcasGA2_TC007853] [Chromosome: LG4] [Map Location: ] [Description: serine hydrolase-like protein] [Gene Type: protein-coding]","LOC656259; TcasGA2_TC007853"]
[356,"NC_007419.2",2397261,"SNV","A","G","Heterozygous",10,20,50,1,8,4,0.33,38.4,12,28,7,7,-0.57,0.16,0.88,"no","A/G","No",1,82.5,"XP_015835100.1:c.1075T>C","XP_015835100.1:p.Ser359Pro","LOC661316",661316,null,"661316 [Gene Symbol: LOC661316] [Locus Tag: TcasGA2_TC007608] [Chromosome: LG4] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC661316; TcasGA2_TC007608"]
[357,"NC_007419.2",2526366,"SNV","C","A","Heterozygous",5,21,23.81,0.96,1,5,0.17,39,6,24,1,2,2.39,0.41,0.74,"no","A/C","No",1,13.76,"XP_008191830.2:c.77G>T","XP_008191830.2:p.Arg26Leu","LOC103312596",103312596,null,"103312596 [Gene Symbol: LOC103312596] [Locus Tag: TcasGA2_TC007598] [Chromosome: LG4] [Map Location: ] [Description: neurogenin-3] [Gene Type: protein-coding]","LOC103312596; TcasGA2_TC007598"]
[358,"NC_007419.2",2622380,"SNV","A","G","Heterozygous",8,22,36.36,1,3,5,0.38,39.5,8,30,2,4,2.87,0.07,0.92,"no","A/G","No",1,55.3,"XP_973259.1:c.[470A>G]; XP_008191832.1:c.[470A>G]","XP_973259.1:p.[Asn157Ser]; XP_008191832.1:p.[Asn157Ser]","LOC662042",662042,null,"662042 [Gene Symbol: LOC662042] [Locus Tag: TcasGA2_TC007912] [Chromosome: LG4] [Map Location: ] [Description: alpha-N-acetylglucosaminidase] [Gene Type: protein-coding]","TcasGA2_TC007912; LOC662042"]
[359,"NC_007419.2",2638838,"SNV","G","A","Heterozygous",5,24,20.83,0.91,3,5,0.38,34.6,8,33,3,3,-2.84,0.04,1,"no","A/G","No",1,10.36,"XP_015834570.1:c.[7717C>T]; XP_015834571.1:c.[7612C>T]; XP_008191836.1:c.[7642C>T]","XP_015834570.1:p.[Pro2573Ser]; XP_015834571.1:p.[Pro2538Ser]; XP_008191836.1:p.[Pro2548Ser]","LOC662147",662147,null,"662147 [Gene Symbol: LOC662147] [Locus Tag: TcasGA2_TC007590] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: neurobeachin] [Gene Type: protein-coding]","LOC662147; TcasGA2_TC007590"]
[360,"NC_007419.2",2683327,"SNV","C","A","Heterozygous",5,20,25,0.98,1,5,0.17,35,6,21,1,1,0.65,0.04,0.73,"no","A/C","No",1,16.49,"XP_008191836.1:c.[4870G>T]; XP_015834571.1:c.[4840G>T]; XP_015834570.1:c.[4945G>T]","XP_008191836.1:p.[Ala1624Ser]; XP_015834571.1:p.[Ala1614Ser]; XP_015834570.1:p.[Ala1649Ser]","LOC662147",662147,null,"662147 [Gene Symbol: LOC662147] [Locus Tag: TcasGA2_TC007590] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: neurobeachin] [Gene Type: protein-coding]","LOC662147; TcasGA2_TC007590"]
[361,"NC_007419.2",2756563,"SNV","G","A","Heterozygous",15,20,75,0.99,10,14,0.42,36.67,24,29,6,8,1,0.76,0.98,"no","A/G","No",1,22.59,"XP_008191837.1:c.[194C>T]; XP_973391.1:c.[164C>T]","XP_008191837.1:p.[Thr65Met]; XP_973391.1:p.[Thr55Met]","LOC662184",662184,null,"662184 [Gene Symbol: LOC662184] [Locus Tag: TcasGA2_TC007589] [Chromosome: LG4] [Map Location: ] [Description: kinesin B] [Gene Type: protein-coding]","LOC662184; kinesin-B; TcasGA2_TC007589"]
[362,"NC_007419.2",3032265,"SNV","G","T","Homozygous",25,25,100,1,13,12,0.48,37.64,25,25,10,12,null,1,1,"no","T/T","No",1,97.57,"XP_008191884.2:c.1397C>A","XP_008191884.2:p.Thr466Lys","LOC100142051",100142051,null,"100142051 [Gene Symbol: LOC100142051] [Locus Tag: TcasGA2_TC007557] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142051] [Gene Type: protein-coding]","TcasGA2_TC007557; LOC100142051"]
[363,"NC_007419.2",3032272,"SNV","T","G","Homozygous",23,23,100,1,13,10,0.43,37.09,23,23,9,11,null,1,1,"no","G/G","No",1,89.91,"XP_008191884.2:c.1390A>C","XP_008191884.2:p.Lys464Gln","LOC100142051",100142051,null,"100142051 [Gene Symbol: LOC100142051] [Locus Tag: TcasGA2_TC007557] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142051] [Gene Type: protein-coding]","TcasGA2_TC007557; LOC100142051"]
[364,"NC_007419.2",3032293,"SNV","A","T","Heterozygous",8,29,27.59,1,2,6,0.25,36.38,8,29,2,2,-2.27,0.11,0.82,"no","A/T","No",1,34.31,"XP_008191884.2:c.1369T>A","XP_008191884.2:p.Leu457Met","LOC100142051",100142051,null,"100142051 [Gene Symbol: LOC100142051] [Locus Tag: TcasGA2_TC007557] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142051] [Gene Type: protein-coding]","TcasGA2_TC007557; LOC100142051"]
[365,"NC_007419.2",3036548,"SNV","A","G","Homozygous",20,21,95.24,1,8,14,0.36,39.2,22,23,9,9,null,0.98,1,"no","G/G","No",1,51.55,"XP_008191885.1:c.1744T>C","XP_008191885.1:p.Tyr582His","LOC103312611",103312611,null,"103312611 [Gene Symbol: LOC103312611] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312611] [Gene Type: protein-coding]","LOC103312611"]
[366,"NC_007419.2",3036688,"SNV","A","T","Homozygous",20,20,100,1,14,11,0.44,37.45,25,25,12,12,null,1,1,"no","T/T","No",1,82.52,"XP_008191885.1:c.1604T>A","XP_008191885.1:p.Val535Glu","LOC103312611",103312611,null,"103312611 [Gene Symbol: LOC103312611] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312611] [Gene Type: protein-coding]","LOC103312611"]
[367,"NC_007419.2",3065371,"SNV","A","T","Homozygous",30,30,100,1,10,20,0.33,36.93,30,30,10,14,null,1,1,"no","T/T","No",1,112.61,"XP_008191910.2:c.770A>T","XP_008191910.2:p.Gln257Leu","LOC663615, LOC103312621","663615 , 103312621",null,"663615 [Gene Symbol: LOC663615] [Locus Tag: TcasGA2_TC007554] [Chromosome: LG4] [Map Location: ] [Description: neuroglobin] [Gene Type: protein-coding] || 103312621 [Gene Symbol: LOC103312621] [Locus Tag: TcasGA2_TC007948] [Chromosome: LG4] [Map Location: ] [Description: carboxypeptidase N subunit 2] [Gene Type: protein-coding]","LOC663615; TcasGA2_TC007554 || TcasGA2_TC007948; LOC103312621"]
[368,"NC_007419.2",3118591,"SNV","C","T","Homozygous",24,27,88.89,0.99,0,24,0,38,24,27,8,12,null,0.96,0.45,"no","T/T","No",1,22.45,"XP_015834409.1:c.[255+28408C>T]; XP_015834407.1:c.[603+28408C>T]; XP_008191895.1:c.[273+28408C>T]; XP_015834405.1:c.[1579G>A]; XP_015834402.1:c.[1579G>A]; XP_015834404.1:c.[1018G>A]; XP_015834401.1:c.[1579G>A]; XP_015834403.1:c.[1231G>A]; XP_008191893.1:c.[606+28408C>T]; XP_008191906.2:c.[1579G>A]; XP_015834408.1:c.[255+28408C>T]; XP_008191896.1:c.[525+28408C>T]","XP_015834405.1:p.[Val527Ile]; XP_015834402.1:p.[Val527Ile]; XP_015834404.1:p.[Val340Ile]; XP_015834401.1:p.[Val527Ile]; XP_015834403.1:p.[Val411Ile]; XP_008191906.2:p.[Val527Ile]","LOC100141693, LOC100141568","100141693 , 100141568",null,"100141693 [Gene Symbol: LOC100141693] [Locus Tag: TcasGA2_TC007950] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100141693] [Gene Type: protein-coding] || 100141568 [Gene Symbol: LOC100141568] [Locus Tag: TcasGA2_TC007546] [Chromosome: LG4] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 17.6] [Gene Type: protein-coding]","LOC100141693; TcasGA2_TC007950 || TcasGA2_TC007546; LOC100141568"]
[369,"NC_007419.2",3220309,"SNV","G","A","Heterozygous",6,20,30,1,3,3,0.5,40.17,6,26,3,5,3.46,0.34,0.87,"no","A/G","No",1,33.74,"XP_976472.1:c.322G>A","XP_976472.1:p.Asp108Asn","LOC664065",664065,null,"664065 [Gene Symbol: LOC664065] [Locus Tag: TcasGA2_TC007962] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC664065] [Gene Type: protein-coding]","LOC664065; TcasGA2_TC007962"]
[370,"NC_007419.2",3220836,"SNV","A","T","Heterozygous",8,36,22.22,0.98,3,7,0.3,39.25,10,50,4,6,1.39,0.29,0.73,"no","A/T","No",1,17.64,"XP_015835102.1:c.[80A>T]; XP_015835101.1:c.[80A>T]","XP_015835102.1:p.[Asn27Ile]; XP_015835101.1:p.[Asn27Ile]","LOC103312576",103312576,null,"103312576 [Gene Symbol: LOC103312576] [Locus Tag: TcasGA2_TC030133] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312576] [Gene Type: protein-coding]","LOC103312576; TcGr36; TcGr34; TcasGA2_TC030133"]
[371,"NC_007419.2",3220906,"SNV","C","G","Heterozygous",8,20,40,1,5,4,0.44,38,9,24,3,5,-0.19,0.05,0.65,"no","C/G","No",1,59.68,"XP_015835102.1:c.[150C>G]; XP_015835101.1:c.[150C>G]","XP_015835102.1:p.[Phe50Leu]; XP_015835101.1:p.[Phe50Leu]","LOC103312576",103312576,null,"103312576 [Gene Symbol: LOC103312576] [Locus Tag: TcasGA2_TC030133] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312576] [Gene Type: protein-coding]","LOC103312576; TcGr36; TcGr34; TcasGA2_TC030133"]
[372,"NC_007419.2",3221037,"SNV","C","A","Homozygous",21,21,100,1,15,8,0.35,37.19,23,23,10,11,null,1,1,"no","A/A","No",1,85.5,"XP_015835101.1:c.[281C>A]; XP_015835102.1:c.[281C>A]","XP_015835101.1:p.[Ala94Glu]; XP_015835102.1:p.[Ala94Glu]","LOC103312576",103312576,null,"103312576 [Gene Symbol: LOC103312576] [Locus Tag: TcasGA2_TC030133] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312576] [Gene Type: protein-coding]","LOC103312576; TcGr36; TcGr34; TcasGA2_TC030133"]
[373,"NC_007419.2",3296472,"SNV","G","T","Heterozygous",5,20,25,0.98,5,4,0.44,34.8,9,27,4,2,-0.83,0.19,1,"no","G/T","No",1,16.33,"XP_975270.1:c.117C>A","XP_975270.1:p.Ser39Arg","LOC664163",664163,null,"664163 [Gene Symbol: LOC664163] [Locus Tag: TcasGA2_TC007534] [Chromosome: LG4] [Map Location: ] [Description: calcineurin subunit B type 2] [Gene Type: protein-coding]","TcasGA2_TC007534; LOC664163"]
[374,"NC_007419.2",3536457,"SNV","A","G","Heterozygous",7,23,30.43,1,3,7,0.3,38.43,10,29,4,3,1.17,0.02,0.97,"no","A/G","No",1,39.72,"XP_008192005.1:c.602A>G","XP_008192005.1:p.His201Arg","LOC103312647",103312647,null,"103312647 [Gene Symbol: LOC103312647] [Locus Tag: TcasGA2_TC007990] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312647; TcasGA2_TC007990"]
[375,"NC_007419.2",3713922,"SNV","T","C","Homozygous",20,20,100,1,8,17,0.32,34.75,25,25,8,12,null,1,1,"no","C/C","No",1,80.88,"XP_015834669.1:c.[1843T>C]; XP_015834668.1:c.[2383T>C]","XP_015834669.1:p.[Phe615Leu]; XP_015834668.1:p.[Phe795Leu]","LOC100141608",100141608,null,"100141608 [Gene Symbol: LOC100141608] [Locus Tag: TcasGA2_TC008000] [Chromosome: LG4] [Map Location: ] [Description: acyl-CoA synthetase family member 4] [Gene Type: protein-coding]","LOC100141608; TcasGA2_TC008000"]
[376,"NC_007419.2",3713951,"SNV","A","T","Homozygous",25,25,100,1,7,20,0.26,38.6,27,27,8,16,null,1,1,"no","T/T","No",1,97.56,"XP_015834669.1:c.[1872A>T]; XP_015834668.1:c.[2412A>T]","XP_015834669.1:p.[Leu624Phe]; XP_015834668.1:p.[Leu804Phe]","LOC100141608",100141608,null,"100141608 [Gene Symbol: LOC100141608] [Locus Tag: TcasGA2_TC008000] [Chromosome: LG4] [Map Location: ] [Description: acyl-CoA synthetase family member 4] [Gene Type: protein-coding]","LOC100141608; TcasGA2_TC008000"]
[377,"NC_007419.2",3713992,"SNV","G","A","Homozygous",24,24,100,1,8,22,0.27,38,30,30,8,17,null,1,1,"no","A/A","No",1,94.52,"XP_015834669.1:c.[1913G>A]; XP_015834668.1:c.[2453G>A]","XP_015834669.1:p.[Ser638Asn]; XP_015834668.1:p.[Ser818Asn]","LOC100141608",100141608,null,"100141608 [Gene Symbol: LOC100141608] [Locus Tag: TcasGA2_TC008000] [Chromosome: LG4] [Map Location: ] [Description: acyl-CoA synthetase family member 4] [Gene Type: protein-coding]","LOC100141608; TcasGA2_TC008000"]
[378,"NC_007419.2",3713995,"SNV","A","G","Homozygous",23,23,100,1,7,21,0.25,37.61,28,28,9,15,null,1,1,"no","G/G","No",1,89.91,"XP_015834669.1:c.[1916A>G]; XP_015834668.1:c.[2456A>G]","XP_015834669.1:p.[Glu639Gly]; XP_015834668.1:p.[Glu819Gly]","LOC100141608",100141608,null,"100141608 [Gene Symbol: LOC100141608] [Locus Tag: TcasGA2_TC008000] [Chromosome: LG4] [Map Location: ] [Description: acyl-CoA synthetase family member 4] [Gene Type: protein-coding]","LOC100141608; TcasGA2_TC008000"]
[379,"NC_007419.2",3802176,"SNV","C","A","Homozygous",22,26,84.62,0.77,20,5,0.2,36.86,25,31,7,15,null,0.96,0.89,"no","A/A","No",1,6.35,"NP_001280515.1:c.[415-13550G>T]; XP_015834300.1:c.[415-13550G>T]; XP_008192024.1:c.[1573C>A]; XP_015834299.1:c.[415-13550G>T]; XP_015834298.1:c.[415-13550G>T]","XP_008192024.1:p.Gln525Lys","LOC657486, LOC103312650","657486 , 103312650","dopamine D2-like receptor","657486 [Gene Symbol: LOC657486] [Locus Tag: TcasGA2_TC007490] [Chromosome: LG4] [Map Location: ] [Description: dopamine D2-like receptor] [Gene Type: protein-coding] || 103312650 [Gene Symbol: LOC103312650] [Locus Tag: TcasGA2_TC008007] [Chromosome: LG4] [Map Location: ] [Description: transient receptor potential channel pyrexia] [Gene Type: protein-coding]","TcasGA2_TC007490; LOC657486 || LOC103312650; TcasGA2_TC008007"]
[380,"NC_007419.2",3908419,"SNV","C","A","Heterozygous",8,24,33.33,1,3,8,0.27,40.38,11,27,1,3,3.21,0.06,1,"no","A/C","No",1,43.47,"XP_015834599.1:c.[825G>T]; XP_008192034.1:c.[771G>T]","XP_015834599.1:p.[Gln275His]; XP_008192034.1:p.[Gln257His]","LOC658788",658788,null,"658788 [Gene Symbol: LOC658788] [Locus Tag: TcasGA2_TC007477] [Chromosome: LG4] [Map Location: ] [Description: synaptotagmin 9] [Gene Type: protein-coding]","GLEAN_07477; Syt9; TcasGA2_TC007477; LOC658788"]
[381,"NC_007419.2",3997534,"SNV","G","A","Homozygous",22,22,100,1,11,21,0.34,37.23,32,32,11,12,null,1,1,"no","A/A","No",1,88.5,"XP_015834910.1:c.[928C>T]; XP_970656.1:c.[979C>T]","XP_015834910.1:p.[Pro310Ser]; XP_970656.1:p.[Pro327Ser]","LOC659238",659238,null,"659238 [Gene Symbol: LOC659238] [Locus Tag: TcasGA2_TC007473] [Chromosome: LG4] [Map Location: ] [Description: histone deacetylase 11] [Gene Type: protein-coding]","TcasGA2_TC007473; LOC659238"]
[382,"NC_007419.2",4000508,"SNV","G","T","Homozygous",24,27,88.89,0.99,15,13,0.46,38.33,28,31,7,15,null,0.87,1,"no","T/T","No",1,21.14,"XP_008192044.1:c.861G>T","XP_008192044.1:p.Glu287Asp","LOC659312",659312,null,"659312 [Gene Symbol: LOC659312] [Locus Tag: TcasGA2_TC008020] [Chromosome: LG4] [Map Location: ] [Description: paramyosin] [Gene Type: protein-coding]","TcasGA2_TC008020; LOC659312"]
[383,"NC_007419.2",4000532,"SNV","A","T","Homozygous",31,31,100,1,18,13,0.42,38.97,31,31,9,18,null,1,1,"no","T/T","No",1,115.61,"XP_008192044.1:c.885A>T","XP_008192044.1:p.Gln295His","LOC659312",659312,null,"659312 [Gene Symbol: LOC659312] [Locus Tag: TcasGA2_TC008020] [Chromosome: LG4] [Map Location: ] [Description: paramyosin] [Gene Type: protein-coding]","TcasGA2_TC008020; LOC659312"]
[384,"NC_007419.2",4013261,"SNV","G","C","Homozygous",24,24,100,1,17,7,0.29,37.88,24,24,8,17,null,1,1,"no","C/C","No",1,92.92,"XP_008192048.1:c.3460G>C","XP_008192048.1:p.Ala1154Pro","LOC659578",659578,null,"659578 [Gene Symbol: LOC659578] [Locus Tag: TcasGA2_TC008022] [Chromosome: LG4] [Map Location: ] [Description: transmembrane protein 131] [Gene Type: protein-coding]","TcasGA2_TC008022; LOC659578"]
[385,"NC_007419.2",4064852,"Deletion","G","-","Heterozygous",5,20,25,0.99,0,5,0,38.2,5,30,1,2,0.35,0.01,0.16,"no","-/G","No",1,19.86,"XP_008192378.1:c.159delG","XP_008192378.1:p.Arg56fs","LOC103312731",103312731,null,"103312731 [Gene Symbol: LOC103312731] [Locus Tag: TcasGA2_TC032800] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312731] [Gene Type: protein-coding]","LOC103312731; TcasGA2_TC032800"]
[386,"NC_007419.2",4065692,"SNV","C","T","Homozygous",21,21,100,1,6,15,0.29,38.62,21,21,8,13,null,1,1,"no","T/T","No",1,85.53,"XP_008192378.1:c.962C>T","XP_008192378.1:p.Ser321Phe","LOC103312731",103312731,null,"103312731 [Gene Symbol: LOC103312731] [Locus Tag: TcasGA2_TC032800] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312731] [Gene Type: protein-coding]","LOC103312731; TcasGA2_TC032800"]
[387,"NC_007419.2",4093160,"SNV","C","T","Homozygous",18,20,90,0.99,7,17,0.29,37.11,24,28,10,11,null,0.99,1,"no","T/T","No",1,20.9,"XP_015834822.1:c.938C>T","XP_015834822.1:p.Ser313Leu","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[388,"NC_007419.2",4095493,"SNV","G","A","Homozygous",19,20,95,1,17,4,0.19,37.68,21,22,10,13,null,1,1,"no","A/A","No",1,51.93,"XP_015834822.1:c.2800G>A","XP_015834822.1:p.Gly934Ser","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[389,"NC_007419.2",4095620,"SNV","G","A","Homozygous",26,26,100,1,2,24,0.08,38.42,26,26,9,16,null,1,1,"no","A/A","No",1,100.54,"XP_015834822.1:c.2882G>A","XP_015834822.1:p.Ser961Asn","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[390,"NC_007419.2",4097181,"SNV","T","A","Homozygous",23,23,100,1,15,8,0.35,37.17,23,23,12,16,null,1,1,"no","A/A","No",1,91.52,"XP_015834822.1:c.4255T>A","XP_015834822.1:p.Ser1419Thr","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[391,"NC_007419.2",4097211,"SNV","A","T","Homozygous",22,22,100,1,16,8,0.33,36.32,24,24,9,16,null,1,1,"no","T/T","No",1,88.54,"XP_015834822.1:c.4285A>T","XP_015834822.1:p.Ile1429Leu","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[392,"NC_007419.2",4097490,"SNV","G","A","Homozygous",20,20,100,1,8,15,0.35,38.2,23,23,9,11,null,1,1,"no","A/A","No",1,82.49,"XP_015834822.1:c.4564G>A","XP_015834822.1:p.Val1522Ile","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[393,"NC_007419.2",4100363,"SNV","G","T","Homozygous",27,27,100,1,9,23,0.28,37.89,32,32,9,13,null,1,1,"no","T/T","No",1,103.58,"XP_971851.1:c.103G>T","XP_971851.1:p.Gly35Cys","LOC660535",660535,null,"660535 [Gene Symbol: LOC660535] [Locus Tag: TcasGA2_TC008030] [Chromosome: LG4] [Map Location: ] [Description: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10] [Gene Type: protein-coding]","NDUO42; LOC660535; TcasGA2_TC008030; Ndufa10"]
[394,"NC_007419.2",4250968,"SNV","G","T","Homozygous",25,25,100,1,14,15,0.48,38.56,29,29,12,19,null,1,1,"no","T/T","No",1,97.56,"XP_008192064.2:c.[1671G>T]; XP_015834444.1:c.[2370G>T]; XP_008192065.2:c.[2367G>T]","XP_008192064.2:p.[Leu557Phe]; XP_015834444.1:p.[Leu790Phe]; XP_008192065.2:p.[Leu789Phe]","LOC660983",660983,null,"660983 [Gene Symbol: LOC660983] [Locus Tag: TcasGA2_TC008037] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: kinesin-like protein CG14535] [Gene Type: protein-coding]","TcasGA2_TC008037; LOC660983"]
[395,"NC_007419.2",4252245,"Deletion","T","-","Heterozygous",6,27,22.22,0.95,6,0,0,40,6,34,1,5,2.42,0.03,0.35,"no","-/T","No",1,13.25,"XP_008192064.2:c.[2902delT]; XP_008192065.2:c.[3598delT]; XP_015834444.1:c.[3601delT]","XP_008192064.2:p.[Ser968fs]; XP_008192065.2:p.[Ser1200fs]; XP_015834444.1:p.[Ser1201fs]","LOC660983",660983,null,"660983 [Gene Symbol: LOC660983] [Locus Tag: TcasGA2_TC008037] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: kinesin-like protein CG14535] [Gene Type: protein-coding]","TcasGA2_TC008037; LOC660983"]
[396,"NC_007419.2",4255297,"SNV","G","A","Homozygous",24,24,100,1,15,11,0.42,37.25,26,26,12,18,null,1,1,"no","A/A","No",1,94.52,"XP_972325.1:c.1387G>A","XP_972325.1:p.Asp463Asn","LOC661043",661043,null,"661043 [Gene Symbol: LOC661043] [Locus Tag: TcasGA2_TC008043] [Chromosome: LG4] [Map Location: ] [Description: nidogen-1] [Gene Type: protein-coding]","TcasGA2_TC008043; LOC661043"]
[397,"NC_007419.2",4400437,"SNV","A","C","Homozygous",27,27,100,1,8,20,0.29,37.67,28,28,11,14,null,1,1,"no","C/C","No",1,101.95,"XP_008192381.1:c.639T>G","XP_008192381.1:p.Ile213Met","LOC662115",662115,null,"662115 [Gene Symbol: LOC662115] [Locus Tag: TcasGA2_TC007444] [Chromosome: LG4] [Map Location: ] [Description: eukaryotic translation initiation factor 5B] [Gene Type: protein-coding]","LOC662115; TcasGA2_TC007444"]
[398,"NC_007419.2",4410825,"SNV","G","T","Heterozygous",6,21,28.57,1,1,6,0.14,36,7,23,2,3,-1.75,0.12,0.15,"no","G/T","No",1,26.19,"XP_976120.1:c.[268G>T]; XP_008192093.1:c.[268G>T]","XP_976120.1:p.[Asp90Tyr]; XP_008192093.1:p.[Asp90Tyr]","LOC660518",660518,null,"660518 [Gene Symbol: LOC660518] [Locus Tag: TcasGA2_TC008057] [Chromosome: LG4] [Map Location: ] [Description: lipid storage droplets surface-binding protein 1] [Gene Type: protein-coding]","TcasGA2_TC008057; LOC660518"]
[399,"NC_007419.2","4416484..4416485","MNV","TT","GG","Homozygous",21,21,100,1,19,2,0.1,37.52,21,21,6,17,null,1,1,"no","GG/GG","No",1,200,"XP_015834911.1:c.[413_414delTTinsGG]; XP_015834912.1:c.[413_414delTTinsGG]; XP_015834913.1:c.[413_414delTTinsGG]; XP_008192095.1:c.[413_414delTTinsGG]; XP_973457.2:c.[413_414delTTinsGG]","XP_015834911.1:p.[Phe138Trp]; XP_015834912.1:p.[Phe138Trp]; XP_015834913.1:p.[Phe138Trp]; XP_008192095.1:p.[Phe138Trp]; XP_973457.2:p.[Phe138Trp]","LOC662253",662253,null,"662253 [Gene Symbol: LOC662253] [Locus Tag: TcasGA2_TC008059] [Chromosome: LG4] [Map Location: ] [Description: protein tumorous imaginal discs, mitochondrial] [Gene Type: protein-coding]","LOC662253; TcasGA2_TC008059"]
[400,"NC_007419.2",4481335,"SNV","C","T","Homozygous",20,20,100,1,9,18,0.33,38.25,27,27,9,6,null,1,1,"no","T/T","No",1,82.52,"XP_015835053.1:c.2264G>A","XP_015835053.1:p.Arg755Gln","LOC662572",662572,null,"662572 [Gene Symbol: LOC662572] [Locus Tag: TcasGA2_TC007440] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC662572] [Gene Type: protein-coding]","TcasGA2_TC007440; LOC662572"]
[401,"NC_007419.2",4515517,"SNV","C","A","Heterozygous",5,21,23.81,0.96,0,5,0,40.2,5,21,1,3,2.23,0.05,0.11,"no","A/C","No",1,13.74,"XP_974039.1:c.[4565G>T]; XP_008192108.1:c.[4565G>T]; XP_008192109.1:c.[4565G>T]","XP_974039.1:p.[Cys1522Phe]; XP_008192108.1:p.[Cys1522Phe]; XP_008192109.1:p.[Cys1522Phe]","LOC662871",662871,null,"662871 [Gene Symbol: LOC662871] [Locus Tag: TcasGA2_TC007434] [Chromosome: LG4] [Map Location: ] [Description: E3 ubiquitin-protein ligase UBR2] [Gene Type: protein-coding]","LOC662871; TcasGA2_TC007434"]
[402,"NC_007419.2",4679274,"SNV","T","A","Homozygous",26,26,100,1,17,14,0.45,36.65,31,31,8,13,null,1,1,"no","A/A","No",1,100.54,"XP_008192115.1:c.[1210A>T]; XP_008192117.1:c.[1132A>T]; XP_008192116.1:c.[1204A>T]; XP_008192113.1:c.[1210A>T]","XP_008192115.1:p.[Thr404Ser]; XP_008192117.1:p.[Thr378Ser]; XP_008192116.1:p.[Thr402Ser]; XP_008192113.1:p.[Thr404Ser]","LOC663093",663093,null,"663093 [Gene Symbol: LOC663093] [Locus Tag: TcasGA2_TC007427] [Chromosome: LG4] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","TcasGA2_TC007427; LOC663093"]
[403,"NC_007419.2",5026096,"SNV","G","A","Heterozygous",19,37,51.35,1,13,6,0.32,37.79,19,41,9,14,0.9,0.22,0.66,"no","A/G","No",1,140.85,"XP_015834326.1:c.2591G>A","XP_015834326.1:p.Ser864Asn","LOC663765, LOC663775","663765 , 663775",null,"663765 [Gene Symbol: LOC663765] [Locus Tag: TcasGA2_TC007403] [Chromosome: LG4] [Map Location: ] [Description: probable glutamine-dependent NAD(+) synthetase] [Gene Type: protein-coding] || 663775 [Gene Symbol: LOC663775] [Locus Tag: TcasGA2_TC008100] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC663775] [Gene Type: protein-coding]","TcasGA2_TC007403; LOC663765 || LOC663775; TcasGA2_TC008100"]
[404,"NC_007419.2",5029139,"SNV","A","G","Homozygous",21,21,100,1,6,15,0.29,38.05,21,21,6,12,null,1,1,"no","G/G","No",1,83.89,"XP_015834326.1:c.[4033A>G]; XP_974925.1:c.[319A>G]","XP_015834326.1:p.[Ile1345Val]; XP_974925.1:p.[Ile107Val]","LOC663765, LOC663775, LOC663797","663765 , 663775 , 663797",null,"663765 [Gene Symbol: LOC663765] [Locus Tag: TcasGA2_TC007403] [Chromosome: LG4] [Map Location: ] [Description: probable glutamine-dependent NAD(+) synthetase] [Gene Type: protein-coding] || 663775 [Gene Symbol: LOC663775] [Locus Tag: TcasGA2_TC008100] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC663775] [Gene Type: protein-coding] || 663797 [Gene Symbol: LOC663797] [Locus Tag: TcasGA2_TC008102] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC663797] [Gene Type: protein-coding]","TcasGA2_TC007403; LOC663765 || LOC663775; TcasGA2_TC008100 || TcasGA2_TC008102; LOC663797"]
[405,"NC_007419.2",5035108,"SNV","C","G","Heterozygous",16,22,72.73,1,16,2,0.11,34.38,18,24,8,6,0.07,0.48,0.94,"no","C/G","No",1,28.82,"XP_976463.1:c.88G>C","XP_976463.1:p.Val30Leu","LOC663818",663818,null,"663818 [Gene Symbol: LOC663818] [Locus Tag: TcasGA2_TC007402] [Chromosome: LG4] [Map Location: ] [Description: larval cuticle protein F1] [Gene Type: protein-coding]","TcasGA2_TC007402; LOC663818"]
[406,"NC_007419.2",5052422,"SNV","C","T","Heterozygous",7,22,31.82,1,7,0,0,39.14,7,26,6,6,1.13,0.08,0.17,"no","C/T","No",1,40.92,"XP_015834463.1:c.[7029+50C>T]; XP_015834467.1:c.[524G>A]","XP_015834467.1:p.Cys175Tyr","LOC663896, LOC103312671","663896 , 103312671",null,"663896 [Gene Symbol: LOC663896] [Locus Tag: TcasGA2_TC008109] [Chromosome: LG4] [Map Location: ] [Description: cytoplasmic dynein 2 heavy chain 1] [Gene Type: protein-coding] || 103312671 [Gene Symbol: LOC103312671] [Locus Tag: TcasGA2_TC007399] [Chromosome: LG4] [Map Location: ] [Description: transforming acidic coiled-coil-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC008109; LOC663896 || TcasGA2_TC007399; LOC103312671"]
[407,"NC_007419.2",5266883,"SNV","G","T","Homozygous",21,21,100,1,11,12,0.48,37.9,23,23,12,14,null,1,1,"no","T/T","No",1,85.52,"XP_008192161.1:c.380G>T","XP_008192161.1:p.Ser127Ile","LOC103312674",103312674,null,"103312674 [Gene Symbol: LOC103312674] [Locus Tag: TcasGA2_TC008117] [Chromosome: LG4] [Map Location: ] [Description: cilia- and flagella-associated protein 97] [Gene Type: protein-coding]","LOC103312674; TcasGA2_TC008117"]
[408,"NC_007419.2",5373504,"SNV","T","C","Homozygous",21,21,100,1,10,15,0.4,35.9,25,25,5,13,null,1,1,"no","C/C","No",1,83.89,"XP_975330.1:c.1810A>G","XP_975330.1:p.Met604Val","LOC664225",664225,null,"664225 [Gene Symbol: LOC664225] [Locus Tag: TcasGA2_TC007375] [Chromosome: LG4] [Map Location: ] [Description: ESF1 homolog] [Gene Type: protein-coding]","TcasGA2_TC007375; LOC664225"]
[409,"NC_007419.2",5381041,"SNV","C","A","Homozygous",20,20,100,1,17,9,0.35,37.9,26,26,11,13,null,1,1,"no","A/A","No",1,82.49,"XP_008192188.1:c.[910G>T]; XP_015834695.1:c.[958G>T]; XP_015834693.1:c.[958G>T]; XP_015834697.1:c.[958G>T]; XP_015834698.1:c.[958G>T]; XP_015834696.1:c.[958G>T]; XP_015834694.1:c.[958G>T]","XP_008192188.1:p.[Asp304Tyr]; XP_015834695.1:p.[Asp320Tyr]; XP_015834693.1:p.[Asp320Tyr]; XP_015834697.1:p.[Asp320Tyr]; XP_015834698.1:p.[Asp320Tyr]; XP_015834696.1:p.[Asp320Tyr]; XP_015834694.1:p.[Asp320Tyr]","LOC103312682",103312682,null,"103312682 [Gene Symbol: LOC103312682] [Locus Tag: TcasGA2_TC007373] [Chromosome: LG4] [Map Location: ] [Description: nuclear RNA export factor 2] [Gene Type: protein-coding]","LOC103312682; TcasGA2_TC007373"]
[410,"NC_007419.2",5546234,"SNV","C","T","Heterozygous",12,20,60,1,12,2,0.14,37.75,14,22,6,11,1.62,0.66,0.94,"no","C/T","No",1,60.94,"XP_975382.1:c.877G>A","XP_975382.1:p.Val293Ile","LOC664282",664282,null,"664282 [Gene Symbol: LOC664282] [Locus Tag: TcasGA2_TC007369] [Chromosome: LG4] [Map Location: ] [Description: D-beta-hydroxybutyrate dehydrogenase, mitochondrial] [Gene Type: protein-coding]","LOC664282; TcasGA2_TC007369"]
[411,"NC_007419.2",5560960,"SNV","C","A","Heterozygous",6,27,22.22,0.9,0,6,0,37.67,6,27,1,3,0.47,0.29,0.46,"no","A/C","No",1,10.06,"XP_015834835.1:c.[1511C>A]; XP_001816051.2:c.[1511C>A]","XP_015834835.1:p.[Ala504Glu]; XP_001816051.2:p.[Ala504Glu]","LOC100142030",100142030,null,"100142030 [Gene Symbol: LOC100142030] [Locus Tag: TcasGA2_TC008137] [Chromosome: LG4] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100142030; TcasGA2_TC008137"]
[412,"NC_007419.2",5806835,"SNV","C","T","Homozygous",21,21,100,1,12,9,0.43,39.57,21,21,5,18,null,1,1,"no","T/T","No",1,85.53,"XP_015834681.1:c.[1093+300G>A]; XP_975467.2:c.[1283G>A]","XP_975467.2:p.Ser428Asn","LOC664366",664366,null,"664366 [Gene Symbol: LOC664366] [Locus Tag: TcasGA2_TC007350] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized protein KIAA0930 homolog] [Gene Type: protein-coding]","LOC664366; TcasGA2_TC007350"]
[413,"NC_007419.2","5866146..5866148","Deletion","GAG","-","Heterozygous",8,25,32,1,4,4,0.5,37.12,8,26,4,5,1.81,0.25,0.93,"no","complex","No",1,200,"XP_008192228.1:c.1177_1179delGAG","XP_008192228.1:p.Glu394del","LOC664401",664401,null,"664401 [Gene Symbol: LOC664401] [Locus Tag: TcasGA2_TC008156] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC664401; TcasGA2_TC008156"]
[414,"NC_007419.2",6141288,"Deletion","C","-","Heterozygous",7,24,29.17,1,0,7,0,33.29,7,28,2,1,-1.59,0.11,0.25,"no","-/C","No",1,24.74,"XP_008192253.1:c.[574delG]; XP_008192254.1:c.[532delG]","XP_008192253.1:p.[Glu192fs]; XP_008192254.1:p.[Glu178fs]","LOC103312695",103312695,null,"103312695 [Gene Symbol: LOC103312695] [Locus Tag: TcasGA2_TC007327] [Chromosome: LG4] [Map Location: ] [Description: zinc finger CCCH domain-containing protein 11A] [Gene Type: protein-coding]","TcasGA2_TC007327; LOC103312695"]
[415,"NC_007419.2",6225082,"SNV","G","A","Homozygous",20,20,100,1,16,11,0.41,38.05,27,27,14,13,null,1,1,"no","A/A","No",1,79.48,"XP_015834502.1:c.[295-20866G>A]; XP_015834501.1:c.[295-20866G>A]; XP_015834500.1:c.[295-20866G>A]; XP_015834503.1:c.[295-20866G>A]; XP_008192267.1:c.[869C>T]; XP_015834498.1:c.[295-20866G>A]; XP_008192263.1:c.[295-20866G>A]; XP_015834499.1:c.[295-20866G>A]","XP_008192267.1:p.Ala290Val","LOC664485, LOC664475","664485 , 664475",null,"664485 [Gene Symbol: LOC664485] [Locus Tag: TcasGA2_TC008184] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized protein CG43867] [Gene Type: protein-coding] || 664475 [Gene Symbol: LOC664475] [Locus Tag: TcasGA2_TC007314] [Chromosome: LG4] [Map Location: ] [Description: probable cytochrome P450 6a14] [Gene Type: protein-coding]","TcasGA2_TC008184; LOC664485 || CYP6BQ5; LOC664475; TcasGA2_TC007314"]
[416,"NC_007419.2",6325683,"SNV","C","G","Heterozygous",11,24,45.83,1,3,8,0.27,38.09,11,28,5,5,1.36,0.22,0.37,"no","C/G","No",1,86.86,"XP_975598.1:c.615G>C","XP_975598.1:p.Leu205Phe","LOC664504",664504,null,"664504 [Gene Symbol: LOC664504] [Locus Tag: TcasGA2_TC007301] [Chromosome: LG4] [Map Location: ] [Description: GAS2-like protein 2] [Gene Type: protein-coding]","LOC664504; TcasGA2_TC007301"]
[417,"NC_007419.2",6597894,"SNV","G","A","Heterozygous",5,24,20.83,0.91,5,0,0,38.6,5,27,2,3,0.71,0.02,0.24,"no","A/G","No",1,10.32,"XP_975626.3:c.[426-2839C>T]; XP_008192301.1:c.[562C>T]","XP_008192301.1:p.Gln188*","LOC664535, LOC103312704","664535 , 103312704",null,"664535 [Gene Symbol: LOC664535] [Locus Tag: TcasGA2_TC007278] [Chromosome: LG4] [Map Location: ] [Description: fasciculation and elongation protein zeta-2] [Gene Type: protein-coding] || 103312704 [Gene Symbol: LOC103312704] [Locus Tag: TcasGA2_TC007279] [Chromosome: LG4] [Map Location: ] [Description: RUN domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC007278; LOC664535 || LOC103312704; TcasGA2_TC007279"]
[418,"NC_007419.2",6713788,"SNV","C","G","Heterozygous",5,20,25,1,5,0,0,35,5,26,2,5,0.87,{"v":0.00202,"d":"2.02E-03"},0.15,"no","complex","No",1,150.51,"XP_001816522.1:c.791C>G","XP_001816522.1:p.Ala264Gly","LOC100142439",100142439,null,"100142439 [Gene Symbol: LOC100142439] [Locus Tag: TcasGA2_TC008208] [Chromosome: LG4] [Map Location: ] [Description: elastin] [Gene Type: protein-coding]","LOC100142439; TcasGA2_TC008208"]
[419,"NC_007419.2",6809265,"SNV","T","A","Heterozygous",11,27,40.74,1,0,11,0,38.82,11,27,3,6,3.4,0.05,1,"no","A/T","No",1,78.08,"XP_008192338.1:c.[617T>A]; XP_015834740.1:c.[590T>A]; XP_008192337.1:c.[617T>A]; XP_015834739.1:c.[617T>A]; XP_008192336.1:c.[617T>A]","XP_008192338.1:p.[Val206Glu]; XP_015834740.1:p.[Val197Glu]; XP_008192337.1:p.[Val206Glu]; XP_015834739.1:p.[Val206Glu]; XP_008192336.1:p.[Val206Glu]","LOC100142371",100142371,null,"100142371 [Gene Symbol: LOC100142371] [Locus Tag: TcasGA2_TC008212] [Chromosome: LG4] [Map Location: ] [Description: DNA-directed RNA polymerase I subunit rpa1] [Gene Type: protein-coding]","TcasGA2_TC008212; LOC100142371"]
[420,"NC_007419.2",6953176,"SNV","G","A","Heterozygous",21,28,75,1,11,10,0.48,39.19,21,28,5,12,-1.41,0.7,0.88,"no","A/G","No",1,25.84,"XP_008192359.1:c.29C>T","XP_008192359.1:p.Pro10Leu","LOC103312726",103312726,null,"103312726 [Gene Symbol: LOC103312726] [Locus Tag: TcasGA2_TC007246] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC007246; LOC103312726"]
[421,"NC_007419.2",7076658,"SNV","G","T","Homozygous",25,25,100,1,8,19,0.3,37.64,27,27,5,10,null,1,1,"no","T/T","No",1,97.57,"XP_966723.1:c.259G>T","XP_966723.1:p.Ala87Ser","LOC655120",655120,null,"655120 [Gene Symbol: LOC655120] [Locus Tag: TcasGA2_TC008229] [Chromosome: LG4] [Map Location: ] [Description: elastin] [Gene Type: protein-coding]","TcasGA2_TC008229; LOC655120"]
[422,"NC_007419.2",7076677,"SNV","C","A","Heterozygous",6,22,27.27,1,0,6,0,35.67,6,24,1,1,-0.15,0.07,0.09,"no","A/C","No",1,23.54,"XP_966723.1:c.278C>A","XP_966723.1:p.Ala93Asp","LOC655120",655120,null,"655120 [Gene Symbol: LOC655120] [Locus Tag: TcasGA2_TC008229] [Chromosome: LG4] [Map Location: ] [Description: elastin] [Gene Type: protein-coding]","TcasGA2_TC008229; LOC655120"]
[423,"NC_007419.2",7076682,"SNV","G","A","Homozygous",22,22,100,1,13,11,0.46,36.68,24,24,5,13,null,1,1,"no","A/A","No",1,88.51,"XP_966723.1:c.283G>A","XP_966723.1:p.Val95Ile","LOC655120",655120,null,"655120 [Gene Symbol: LOC655120] [Locus Tag: TcasGA2_TC008229] [Chromosome: LG4] [Map Location: ] [Description: elastin] [Gene Type: protein-coding]","TcasGA2_TC008229; LOC655120"]
[424,"NC_007419.2",7085155,"SNV","G","C","Heterozygous",14,25,56,1,11,5,0.31,37.29,16,27,7,11,-0.08,0.3,0.78,"no","C/G","No",1,84.04,"XP_008192496.2:c.218C>G","XP_008192496.2:p.Thr73Ser","LOC103312787",103312787,null,"103312787 [Gene Symbol: LOC103312787] [Locus Tag: TcasGA2_TC007239] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312787] [Gene Type: protein-coding]","TcasGA2_TC007239; LOC103312787"]
[425,"NC_007419.2",7116598,"SNV","T","C","Homozygous",23,23,100,1,14,17,0.45,34.83,31,31,10,9,null,1,1,"no","C/C","No",1,89.89,"XP_008192472.1:c.121T>C","XP_008192472.1:p.Tyr41His","LOC103312775",103312775,null,"103312775 [Gene Symbol: LOC103312775] [Locus Tag: TcasGA2_TC008238] [Chromosome: LG4] [Map Location: ] [Description: gem-associated protein 8] [Gene Type: protein-coding]","TcasGA2_TC008238; LOC103312775"]
[426,"NC_007419.2",7176820,"SNV","A","C","Homozygous",22,22,100,1,18,4,0.18,38.91,22,22,10,13,null,1,1,"no","C/C","No",1,86.9,"XP_015834643.1:c.[229T>G]; XP_015834640.1:c.[229T>G]; XP_015834645.1:c.[229T>G]; XP_015834642.1:c.[229T>G]; XP_015834644.1:c.[229T>G]; XP_015834641.1:c.[229T>G]; XP_015834646.1:c.[229T>G]; XP_015834639.1:c.[229T>G]; XP_015834647.1:c.[229T>G]; XP_015834638.1:c.[229T>G]","XP_015834643.1:p.[Leu77Val]; XP_015834640.1:p.[Leu77Val]; XP_015834645.1:p.[Leu77Val]; XP_015834642.1:p.[Leu77Val]; XP_015834644.1:p.[Leu77Val]; XP_015834641.1:p.[Leu77Val]; XP_015834646.1:p.[Leu77Val]; XP_015834639.1:p.[Leu77Val]; XP_015834647.1:p.[Leu77Val]; XP_015834638.1:p.[Leu77Val]","LOC656932",656932,null,"656932 [Gene Symbol: LOC656932] [Locus Tag: TcasGA2_TC007231] [Chromosome: LG4] [Map Location: ] [Description: mucin-2] [Gene Type: protein-coding]","TcasGA2_TC007231; LOC656932"]
[427,"NC_007419.2",7492753,"SNV","G","A","Homozygous",25,25,100,1,20,5,0.2,37.68,25,25,6,14,null,1,1,"no","A/A","No",1,97.53,"XP_008192545.1:c.[1576G>A]; XP_008192546.1:c.[709-974G>A]","XP_008192545.1:p.Glu526Lys","LOC659455, LOC103312801","659455 , 103312801",null,"659455 [Gene Symbol: LOC659455] [Locus Tag: TcasGA2_TC008263] [Chromosome: LG4] [Map Location: ] [Description: kinesin 5D] [Gene Type: protein-coding] || 103312801 [Gene Symbol: LOC103312801] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: kinesin-like protein KIF11-A] [Gene Type: protein-coding]","LOC659455; kinesin-5D; TcasGA2_TC008263 || LOC103312801"]
[428,"NC_007419.2",7492862,"SNV","C","T","Homozygous",34,34,100,1,12,24,0.33,35.56,36,36,15,12,null,1,1,"no","T/T","No",1,124.65,"XP_008192546.1:c.[709-865C>T]; XP_008192545.1:c.[1685C>T]","XP_008192545.1:p.Ala562Val","LOC659455, LOC103312801","659455 , 103312801",null,"659455 [Gene Symbol: LOC659455] [Locus Tag: TcasGA2_TC008263] [Chromosome: LG4] [Map Location: ] [Description: kinesin 5D] [Gene Type: protein-coding] || 103312801 [Gene Symbol: LOC103312801] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: kinesin-like protein KIF11-A] [Gene Type: protein-coding]","LOC659455; kinesin-5D; TcasGA2_TC008263 || LOC103312801"]
[429,"NC_007419.2",7501007,"SNV","C","G","Heterozygous",17,28,60.71,1,3,16,0.16,38.82,19,31,6,8,3.67,0.27,0.73,"no","C/G","No",1,75.99,"XP_970964.1:c.797C>G","XP_970964.1:p.Thr266Ser","LOC659579",659579,null,"659579 [Gene Symbol: LOC659579] [Locus Tag: TcasGA2_TC008264] [Chromosome: LG4] [Map Location: ] [Description: probable nucleoporin Nup58] [Gene Type: protein-coding]","LOC659579; TcasGA2_TC008264"]
[430,"NC_007419.2",7501031,"SNV","C","T","Homozygous",31,31,100,1,8,23,0.26,38.23,31,31,12,15,null,1,1,"no","T/T","No",1,115.61,"XP_970964.1:c.821C>T","XP_970964.1:p.Ala274Val","LOC659579",659579,null,"659579 [Gene Symbol: LOC659579] [Locus Tag: TcasGA2_TC008264] [Chromosome: LG4] [Map Location: ] [Description: probable nucleoporin Nup58] [Gene Type: protein-coding]","LOC659579; TcasGA2_TC008264"]
[431,"NC_007419.2",7501830,"SNV","C","A","Heterozygous",5,20,25,0.98,5,0,0,37.8,5,23,2,4,0.39,0.2,0.38,"no","A/C","No",1,16.45,"XP_970964.1:c.1573C>A","XP_970964.1:p.Pro525Thr","LOC659579",659579,null,"659579 [Gene Symbol: LOC659579] [Locus Tag: TcasGA2_TC008264] [Chromosome: LG4] [Map Location: ] [Description: probable nucleoporin Nup58] [Gene Type: protein-coding]","LOC659579; TcasGA2_TC008264"]
[432,"NC_007419.2",7634176,"SNV","C","A","Heterozygous",5,21,23.81,0.96,0,5,0,40.6,5,26,2,3,2.06,0.24,0.22,"no","A/C","No",1,13.73,"XP_976019.1:c.[2137G>T]; XP_967042.1:c.[2137G>T]; XP_015834618.1:c.[2215G>T]; XP_015834619.1:c.[2215G>T]; XP_015834620.1:c.[2173G>T]","XP_976019.1:p.[Ala713Ser]; XP_967042.1:p.[Ala713Ser]; XP_015834618.1:p.[Ala739Ser]; XP_015834619.1:p.[Ala739Ser]; XP_015834620.1:p.[Ala725Ser]","LOC659289",659289,null,"659289 [Gene Symbol: LOC659289] [Locus Tag: TcasGA2_TC007200] [Chromosome: LG4] [Map Location: ] [Description: probable phosphorylase b kinase regulatory subunit alpha] [Gene Type: protein-coding]","TcasGA2_TC007200; LOC659289"]
[433,"NC_007419.2",7634178,"SNV","C","T","Homozygous",21,21,100,1,12,14,0.46,38.57,26,26,11,17,null,1,1,"no","T/T","No",1,85.53,"XP_976019.1:c.[2135G>A]; XP_015834620.1:c.[2171G>A]; XP_967042.1:c.[2135G>A]; XP_015834618.1:c.[2213G>A]; XP_015834619.1:c.[2213G>A]","XP_976019.1:p.[Ser712Asn]; XP_015834620.1:p.[Ser724Asn]; XP_967042.1:p.[Ser712Asn]; XP_015834618.1:p.[Ser738Asn]; XP_015834619.1:p.[Ser738Asn]","LOC659289",659289,null,"659289 [Gene Symbol: LOC659289] [Locus Tag: TcasGA2_TC007200] [Chromosome: LG4] [Map Location: ] [Description: probable phosphorylase b kinase regulatory subunit alpha] [Gene Type: protein-coding]","TcasGA2_TC007200; LOC659289"]
[434,"NC_007419.2",7868873,"SNV","A","G","Homozygous",21,21,100,1,8,16,0.33,37.19,24,24,12,13,null,1,1,"no","G/G","No",1,83.88,"XP_015834679.1:c.2045A>G","XP_015834679.1:p.Lys682Arg","LOC103312777",103312777,null,"103312777 [Gene Symbol: LOC103312777] [Locus Tag: TcasGA2_TC008283] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312777] [Gene Type: protein-coding]","TcasGA2_TC008283; LOC103312777"]
[435,"NC_007419.2",7880812,"SNV","T","C","Homozygous",24,24,100,1,9,19,0.32,36.12,28,28,8,9,null,1,1,"no","C/C","No",1,92.92,"XP_015834337.1:c.359A>G","XP_015834337.1:p.Asn120Ser","LOC661718",661718,null,"661718 [Gene Symbol: LOC661718] [Locus Tag: TcasGA2_TC007187] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC661718] [Gene Type: protein-coding]","LOC661718; TcasGA2_TC007187"]
[436,"NC_007419.2",7882523,"SNV","G","A","Homozygous",21,21,100,1,9,16,0.36,38.95,25,25,11,11,null,1,1,"no","A/A","No",1,85.5,"XP_001813143.1:c.122C>T","XP_001813143.1:p.Pro41Leu","LOC661792",661792,null,"661792 [Gene Symbol: LOC661792] [Locus Tag: TcasGA2_TC007185] [Chromosome: LG4] [Map Location: ] [Description: lipase 3] [Gene Type: protein-coding]","LOC661792; TcasGA2_TC007185"]
[437,"NC_007419.2",7884877,"SNV","C","T","Heterozygous",6,20,30,1,3,3,0.5,36.67,6,27,3,3,-1.07,0.6,0.97,"no","C/T","No",1,33.77,"XP_973063.1:c.652G>A","XP_973063.1:p.Val218Ile","LOC661837",661837,null,"661837 [Gene Symbol: LOC661837] [Locus Tag: TcasGA2_TC032875] [Chromosome: LG4] [Map Location: ] [Description: lipase 1-like] [Gene Type: protein-coding]","LOC661837; TcasGA2_TC032875"]
[438,"NC_007419.2",7889126,"SNV","G","A","Homozygous",21,21,100,1,19,7,0.27,37.71,26,26,8,11,null,1,1,"no","A/A","No",1,85.5,"XP_008192578.1:c.1132C>T","XP_008192578.1:p.Pro378Ser","LOC661923",661923,null,"661923 [Gene Symbol: LOC661923] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: lipase 3-like] [Gene Type: protein-coding]","LOC661923"]
[439,"NC_007419.2",8129063,"SNV","C","T","Homozygous",25,25,100,1,23,15,0.39,35.96,38,38,11,12,null,1,1,"no","T/T","No",1,94.56,"XP_973905.3:c.902C>T","XP_973905.3:p.Ser301Phe","LOC662731",662731,null,"662731 [Gene Symbol: LOC662731] [Locus Tag: TcasGA2_TC008301] [Chromosome: LG4] [Map Location: ] [Description: aldose reductase] [Gene Type: protein-coding]","LOC662731; TcasGA2_TC008301"]
[440,"NC_007419.2",8141668,"SNV","T","C","Homozygous",26,26,100,1,12,17,0.41,38.81,29,29,13,14,null,1,1,"no","C/C","No",1,98.93,"XP_001815591.2:c.326A>G","XP_001815591.2:p.Glu109Gly","LOC100142467",100142467,null,"100142467 [Gene Symbol: LOC100142467] [Locus Tag: TcasGA2_TC007168] [Chromosome: LG4] [Map Location: ] [Description: gastrula zinc finger protein XlCGF28.1] [Gene Type: protein-coding]","LOC100142467; TcasGA2_TC007168"]
[441,"NC_007419.2","8282954..8282955","MNV","CG","TA","Heterozygous",7,22,31.82,1,6,4,0.4,39,10,25,7,4,0.28,0.25,0.58,"no","complex","No",1,200,"XP_974173.2:c.[590-10932_590-10931delCGinsTA]; XP_015835010.1:c.[280+444_280+445delCGinsTA]; XP_015835009.1:c.[678_679delCGinsTA]","XP_015835009.1:p.Gly227Arg","LOC663015, LOC107397843","663015 , 107397843",null,"663015 [Gene Symbol: LOC663015] [Locus Tag: TcasGA2_TC008308] [Chromosome: LG4] [Map Location: ] [Description: carbonic anhydrase-related protein 10] [Gene Type: protein-coding] || 107397843 [Gene Symbol: LOC107397843] [Locus Tag: TcasGA2_TC031112] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397843] [Gene Type: protein-coding]","LOC663015; TcasGA2_TC008308 || TcasGA2_TC031112; LOC107397843"]
[442,"NC_007419.2",8614605,"SNV","T","C","Homozygous",20,20,100,1,9,16,0.36,37.75,25,25,9,13,null,1,1,"no","C/C","No",1,80.88,"XP_008192663.1:c.[1918A>G]; XP_008192662.1:c.[1918A>G]; XP_015834970.1:c.[1918A>G]; XP_015834969.1:c.[1918A>G]","XP_008192663.1:p.[Thr640Ala]; XP_008192662.1:p.[Thr640Ala]; XP_015834970.1:p.[Thr640Ala]; XP_015834969.1:p.[Thr640Ala]","LOC663713",663713,null,"663713 [Gene Symbol: LOC663713] [Locus Tag: TcasGA2_TC007147] [Chromosome: LG4] [Map Location: ] [Description: harmonin] [Gene Type: protein-coding]","TcasGA2_TC007147; LOC663713"]
[443,"NC_007419.2","8691142^8691143","Insertion","-","G","Heterozygous",9,34,26.47,1,4,5,0.44,39.22,9,39,3,6,1.29,0.24,1,"no","-/G","No",1,35.27,"XP_015834829.1:c.1118_1119insG","XP_015834829.1:p.Ile375fs","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[444,"NC_007419.2",8691213,"SNV","G","A","Heterozygous",18,37,48.65,1,16,7,0.3,38.44,23,44,11,13,0.56,0.94,1,"no","A/G","No",1,139.13,"XP_015834829.1:c.1189G>A","XP_015834829.1:p.Val397Ile","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[445,"NC_007419.2",8691216,"SNV","A","T","Homozygous",34,39,87.18,1,30,8,0.21,38.06,38,45,21,23,null,0.95,0.89,"no","T/T","No",1,31.95,"XP_015834829.1:c.1192A>T","XP_015834829.1:p.Met398Leu","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[446,"NC_007419.2",8691243,"SNV","G","A","Heterozygous",14,33,42.42,1,8,6,0.43,39.71,14,42,10,10,1.6,0.92,0.97,"no","A/G","No",1,99.47,"XP_015834829.1:c.1219G>A","XP_015834829.1:p.Val407Ile","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[447,"NC_007419.2",8691265,"SNV","G","A","Heterozygous",19,36,52.78,1,16,6,0.27,37.89,22,44,11,12,-2.04,0.49,0.76,"no","A/G","No",1,131.21,"XP_015834829.1:c.1241G>A","XP_015834829.1:p.Gly414Asp","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[448,"NC_007419.2",8691333,"SNV","C","T","Heterozygous",15,53,28.3,1,11,5,0.31,38.07,16,68,9,13,0.08,0.04,0.81,"no","C/T","No",1,59.31,"XP_015834829.1:c.1309C>T","XP_015834829.1:p.Pro437Ser","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[449,"NC_007419.2",8691396,"SNV","G","A","Heterozygous",12,40,30,1,7,8,0.47,37.83,15,51,7,7,1.03,0.29,0.8,"no","A/G","No",1,54.59,"XP_015834829.1:c.1372G>A","XP_015834829.1:p.Gly458Ser","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[450,"NC_007419.2",8691412,"SNV","T","G","Homozygous",35,35,100,1,15,30,0.33,39.11,45,45,18,21,null,1,1,"no","G/G","No",1,123.01,"XP_015834829.1:c.1388T>G","XP_015834829.1:p.Leu463Arg","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[451,"NC_007419.2",8691416,"SNV","A","T","Heterozygous",19,35,54.29,1,5,17,0.23,39,22,41,8,11,-0.23,0.62,1,"no","A/T","No",1,119.67,"XP_015834829.1:c.1392A>T","XP_015834829.1:p.Leu464Phe","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[452,"NC_007419.2",8691520,"SNV","A","G","Homozygous",30,32,93.75,1,17,16,0.48,38.33,33,35,15,18,null,0.98,1,"no","G/G","No",1,57.11,"XP_015834829.1:c.1496A>G","XP_015834829.1:p.Tyr499Cys","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[453,"NC_007419.2",8691523,"SNV","C","T","Heterozygous",15,32,46.88,1,13,5,0.28,38,18,35,9,10,-1.11,0.7,0.64,"no","C/T","No",1,114.93,"XP_015834829.1:c.1499C>T","XP_015834829.1:p.Ser500Phe","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[454,"NC_007419.2",8691532,"SNV","T","C","Homozygous",29,31,93.55,1,15,16,0.48,38.79,31,34,15,17,null,1,1,"no","C/C","No",1,51.67,"XP_015834829.1:c.1508T>C","XP_015834829.1:p.Leu503Pro","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[455,"NC_007419.2",8691538,"SNV","G","A","Heterozygous",15,37,40.54,1,10,5,0.33,38.27,15,38,10,10,-1.3,0.07,0.9,"no","A/G","No",1,101.02,"XP_015834829.1:c.1514G>A","XP_015834829.1:p.Trp505*","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[456,"NC_007419.2",8691580,"SNV","A","T","Heterozygous",6,24,25,0.99,5,1,0.17,41,6,27,4,4,2.8,0.48,0.48,"no","A/T","No",1,22.68,"XP_015834829.1:c.1556A>T","XP_015834829.1:p.Tyr519Phe","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[457,"NC_007419.2",8691598,"SNV","T","C","Heterozygous",6,21,28.57,1,4,3,0.43,35.67,7,24,4,4,-1.63,0.36,0.99,"no","C/T","No",1,32.56,"XP_015834829.1:c.1574T>C","XP_015834829.1:p.Ile525Thr","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[458,"NC_007419.2","8916227..8916228","MNV","AG","GA","Homozygous",20,20,100,1,2,20,0.09,38.1,22,22,9,9,null,1,1,"no","GA/GA","No",1,200,"XP_975065.2:c.[41-1888_41-1887delAGinsGA]; XP_015834885.1:c.[1982_1983delCTinsTC]","XP_015834885.1:p.Ser661Phe","LOC663945, LOC100142143","663945 , 100142143",null,"663945 [Gene Symbol: LOC663945] [Locus Tag: TcasGA2_TC008349] [Chromosome: LG4] [Map Location: ] [Description: RWD domain-containing protein 2A] [Gene Type: protein-coding] || 100142143 [Gene Symbol: LOC100142143] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142143] [Gene Type: protein-coding]","LOC663945; TcasGA2_TC008349 || LOC100142143"]
[459,"NC_007419.2",8951363,"SNV","G","A","Homozygous",27,27,100,1,19,10,0.34,39.26,29,29,13,17,null,1,1,"no","A/A","No",1,103.55,"XP_008192488.1:c.[2947G>A]; XP_015834653.1:c.[2878G>A]; XP_015834652.1:c.[2878G>A]","XP_008192488.1:p.[Ala983Thr]; XP_015834653.1:p.[Ala960Thr]; XP_015834652.1:p.[Ala960Thr]","LOC103312782, LOC107397770","103312782 , 107397770",null,"103312782 [Gene Symbol: LOC103312782] [Locus Tag: TcasGA2_TC008351] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding] || 107397770 [Gene Symbol: LOC107397770] [Locus Tag: TcasGA2_TC008352] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397770] [Gene Type: protein-coding]","TcasGA2_TC008351; LOC103312782 || TcasGA2_TC008352; LOC107397770"]
[460,"NC_007419.2",8951376,"SNV","A","C","Homozygous",26,26,100,1,17,16,0.48,37.65,33,33,13,14,null,1,1,"no","C/C","No",1,98.94,"XP_015834653.1:c.[2891A>C]; XP_015834652.1:c.[2891A>C]; XP_008192488.1:c.[2960A>C]","XP_015834653.1:p.[Asn964Thr]; XP_015834652.1:p.[Asn964Thr]; XP_008192488.1:p.[Asn987Thr]","LOC103312782, LOC107397770","103312782 , 107397770",null,"103312782 [Gene Symbol: LOC103312782] [Locus Tag: TcasGA2_TC008351] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding] || 107397770 [Gene Symbol: LOC107397770] [Locus Tag: TcasGA2_TC008352] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397770] [Gene Type: protein-coding]","TcasGA2_TC008351; LOC103312782 || TcasGA2_TC008352; LOC107397770"]
[461,"NC_007419.2",8951421,"SNV","C","T","Homozygous",20,20,100,1,11,15,0.42,37.6,26,26,10,14,null,1,1,"no","T/T","No",1,82.51,"XP_015834653.1:c.[2936C>T]; XP_008192488.1:c.[3005C>T]; XP_015834652.1:c.[2936C>T]","XP_015834653.1:p.[Thr979Met]; XP_008192488.1:p.[Thr1002Met]; XP_015834652.1:p.[Thr979Met]","LOC103312782, LOC107397770","103312782 , 107397770",null,"103312782 [Gene Symbol: LOC103312782] [Locus Tag: TcasGA2_TC008351] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding] || 107397770 [Gene Symbol: LOC107397770] [Locus Tag: TcasGA2_TC008352] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397770] [Gene Type: protein-coding]","TcasGA2_TC008351; LOC103312782 || TcasGA2_TC008352; LOC107397770"]
[462,"NC_007419.2",9229664,"SNV","T","A","Homozygous",23,23,100,1,9,14,0.39,38.09,23,23,14,12,null,1,1,"no","A/A","No",1,91.52,"XP_015834690.1:c.[2870A>T]; XP_015834691.1:c.[2870A>T]","XP_015834690.1:p.[Asn957Ile]; XP_015834691.1:p.[Asn957Ile]","LOC664279",664279,null,"664279 [Gene Symbol: LOC664279] [Locus Tag: TcasGA2_TC007111] [Chromosome: LG4] [Map Location: ] [Description: YLP motif-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC007111; LOC664279"]
[463,"NC_007419.2",9647397,"SNV","A","G","Homozygous",23,23,100,1,19,9,0.32,35.61,28,28,11,14,null,1,1,"no","G/G","No",1,89.89,"XP_967661.1:c.112A>G","XP_967661.1:p.Thr38Ala","LOC656012",656012,null,"656012 [Gene Symbol: LOC656012] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC656012] [Gene Type: protein-coding]","LOC656012"]
[464,"NC_007419.2",9669210,"SNV","A","G","Heterozygous",14,21,66.67,1,13,5,0.28,36.43,18,25,6,8,-0.63,0.86,0.93,"no","A/G","No",1,43.77,"XP_968130.4:c.67A>G","XP_968130.4:p.Thr23Ala","LOC656511",656511,null,"656511 [Gene Symbol: LOC656511] [Locus Tag: TcasGA2_TC008395] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC656511; TcasGA2_TC008395"]
[465,"NC_007419.2",9681938,"SNV","C","A","Heterozygous",6,27,22.22,0.9,0,6,0,38.5,6,27,2,3,-0.47,0.07,0.08,"no","A/C","No",1,10.04,"XP_968283.1:c.560G>T","XP_968283.1:p.Arg187Ile","LOC656681",656681,null,"656681 [Gene Symbol: LOC656681] [Locus Tag: TcasGA2_TC007092] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC656681] [Gene Type: protein-coding]","LOC656681; TcasGA2_TC007092"]
[466,"NC_007419.2",9711036,"SNV","T","G","Heterozygous",11,20,55,1,7,6,0.46,36,13,22,3,8,-2.24,0.81,1,"no","G/T","No",1,67.26,"XP_008192893.2:c.[101A>C]; XP_015834347.1:c.[101A>C]","XP_008192893.2:p.[Asp34Ala]; XP_015834347.1:p.[Asp34Ala]","LOC656933",656933,null,"656933 [Gene Symbol: LOC656933] [Locus Tag: TcasGA2_TC007090] [Chromosome: LG4] [Map Location: ] [Description: nose resistant to fluoxetine protein 6] [Gene Type: protein-coding]","LOC656933; TcasGA2_TC007090"]
[467,"NC_007419.2",9720229,"SNV","G","T","Heterozygous",5,20,25,0.98,5,0,0,39.6,5,22,2,2,1.09,0.07,0.36,"no","G/T","No",1,16.31,"XP_015834344.1:c.[1077C>A]; XP_015834345.1:c.[1050C>A]; XP_008192772.1:c.[1152C>A]; XP_008192769.1:c.[1242C>A]; XP_008192774.1:c.[1071C>A]; XP_008192775.1:c.[903C>A]; XP_008192770.1:c.[1152C>A]; XP_015834346.1:c.[903C>A]; XP_008192771.1:c.[1152C>A]","XP_015834344.1:p.[Tyr359*]; XP_015834345.1:p.[Tyr350*]; XP_008192772.1:p.[Tyr384*]; XP_008192769.1:p.[Tyr414*]; XP_008192774.1:p.[Tyr357*]; XP_008192775.1:p.[Tyr301*]; XP_008192770.1:p.[Tyr384*]; XP_015834346.1:p.[Tyr301*]; XP_008192771.1:p.[Tyr384*]","LOC657019",657019,null,"657019 [Gene Symbol: LOC657019] [Locus Tag: TcasGA2_TC007088] [Chromosome: LG4] [Map Location: ] [Description: apoptosis-stimulating of p53 protein 1] [Gene Type: protein-coding]","LOC657019; TcasGA2_TC007088"]
[468,"NC_007419.2",9808833,"SNV","G","T","Homozygous",26,26,100,1,18,24,0.43,37.62,42,42,14,12,null,1,1,"no","T/T","No",1,100.57,"XP_001809578.1:c.[211G>T]; XP_008192769.1:c.[75+1013C>A]","XP_001809578.1:p.Val71Leu","LOC657019, LOC100142512","657019 , 100142512",null,"657019 [Gene Symbol: LOC657019] [Locus Tag: TcasGA2_TC007088] [Chromosome: LG4] [Map Location: ] [Description: apoptosis-stimulating of p53 protein 1] [Gene Type: protein-coding] || 100142512 [Gene Symbol: LOC100142512] [Locus Tag: TcasGA2_TC008401] [Chromosome: LG4] [Map Location: ] [Description: cuticle protein CP14.6] [Gene Type: protein-coding]","LOC657019; TcasGA2_TC007088 || LOC100142512; TcasGA2_TC008401"]
[469,"NC_007419.2",9808843,"SNV","C","T","Homozygous",27,27,100,1,18,24,0.43,37.3,42,42,14,14,null,1,1,"no","T/T","No",1,103.58,"XP_008192769.1:c.[75+1003G>A]; XP_001809578.1:c.[221C>T]","XP_001809578.1:p.Ser74Phe","LOC657019, LOC100142512","657019 , 100142512",null,"657019 [Gene Symbol: LOC657019] [Locus Tag: TcasGA2_TC007088] [Chromosome: LG4] [Map Location: ] [Description: apoptosis-stimulating of p53 protein 1] [Gene Type: protein-coding] || 100142512 [Gene Symbol: LOC100142512] [Locus Tag: TcasGA2_TC008401] [Chromosome: LG4] [Map Location: ] [Description: cuticle protein CP14.6] [Gene Type: protein-coding]","LOC657019; TcasGA2_TC007088 || LOC100142512; TcasGA2_TC008401"]
[470,"NC_007419.2",9929165,"SNV","C","T","Heterozygous",9,21,42.86,1,3,6,0.33,38.78,9,21,2,5,1.42,0.23,0.99,"no","C/T","No",1,69.16,"XP_015834866.1:c.[2881G>A]; XP_008192801.1:c.[3022G>A]; XP_008192803.1:c.[3007G>A]","XP_015834866.1:p.[Val961Ile]; XP_008192801.1:p.[Val1008Ile]; XP_008192803.1:p.[Val1003Ile]","LOC658864",658864,null,"658864 [Gene Symbol: LOC658864] [Locus Tag: TcasGA2_TC007082] [Chromosome: LG4] [Map Location: ] [Description: disheveled-associated activator of morphogenesis 1] [Gene Type: protein-coding]","TcasGA2_TC007082; LOC658864"]
[471,"NC_007419.2",9933373,"SNV","A","G","Homozygous",28,28,100,1,15,14,0.48,37.14,29,29,7,19,null,1,1,"no","G/G","No",1,104.95,"XP_015834866.1:c.[1448T>C]; XP_008192801.1:c.[1589T>C]; XP_008192803.1:c.[1574T>C]","XP_015834866.1:p.[Val483Ala]; XP_008192801.1:p.[Val530Ala]; XP_008192803.1:p.[Val525Ala]","LOC658864",658864,null,"658864 [Gene Symbol: LOC658864] [Locus Tag: TcasGA2_TC007082] [Chromosome: LG4] [Map Location: ] [Description: disheveled-associated activator of morphogenesis 1] [Gene Type: protein-coding]","TcasGA2_TC007082; LOC658864"]
[472,"NC_007419.2",10083265,"SNV","G","A","Heterozygous",5,22,22.73,0.97,0,5,0,39.6,5,24,1,2,1.25,0.43,0.54,"no","A/G","No",1,15.59,"XP_971683.1:c.208C>T","XP_971683.1:p.Pro70Ser","LOC660352",660352,null,"660352 [Gene Symbol: LOC660352] [Locus Tag: TcasGA2_TC007075] [Chromosome: LG4] [Map Location: ] [Description: probable 39S ribosomal protein L49, mitochondrial] [Gene Type: protein-coding]","LOC660352; TcasGA2_TC007075"]
[473,"NC_007419.2",10311168,"SNV","G","T","Heterozygous",5,20,25,0.98,5,0,0,41,5,22,1,3,3.06,0.33,0.74,"no","G/T","No",1,16.28,"XP_015834556.1:c.634G>T","XP_015834556.1:p.Ala212Ser","LOC661588",661588,null,"661588 [Gene Symbol: LOC661588] [Locus Tag: TcasGA2_TC008439] [Chromosome: LG4] [Map Location: ] [Description: arylsulfatase B] [Gene Type: protein-coding]","TcasGA2_TC008439; LOC661588"]
[474,"NC_007419.2",10793399,"SNV","T","C","Heterozygous",15,22,68.18,1,1,14,0.07,37.53,15,22,6,9,1.9,0.26,0.19,"no","C/T","No",1,40.88,"XP_015834714.1:c.7679A>G","XP_015834714.1:p.Tyr2560Cys","LOC662402",662402,null,"662402 [Gene Symbol: LOC662402] [Locus Tag: TcasGA2_TC007046] [Chromosome: LG4] [Map Location: ] [Description: hect E3 ubiquitin ligase] [Gene Type: protein-coding]","TcasGA2_TC007046; LOC662402"]
[475,"NC_007419.2","10916555..10916556","MNV","CT","TC","Heterozygous",8,23,34.78,1,2,6,0.25,39.56,8,29,2,3,null,0.05,0.95,"no","complex","No",1,200,"XP_973880.2:c.938_939delCTinsTC","XP_973880.2:p.Thr313Ile","LOC662704",662704,null,"662704 [Gene Symbol: LOC662704] [Locus Tag: TcasGA2_TC008460] [Chromosome: LG4] [Map Location: ] [Description: glycerate kinase] [Gene Type: protein-coding]","TcasGA2_TC008460; LOC662704"]
[476,"NC_007419.2",11097802,"SNV","A","T","Homozygous",22,22,100,1,7,16,0.3,39.23,23,23,10,11,null,1,1,"no","T/T","No",1,88.53,"XP_015834940.1:c.[343A>T]; XP_015834941.1:c.[343A>T]","XP_015834940.1:p.[Ser115Cys]; XP_015834941.1:p.[Ser115Cys]","Mt2",100142187,null,"100142187 [Gene Symbol: Mt2] [Locus Tag: TcasGA2_TC008469] [Chromosome: LG4] [Map Location: ] [Description: methyltransferase 2] [Gene Type: protein-coding]","Mt2; jhamt-l2; TcasGA2_TC008469"]
[477,"NC_007419.2",11424853,"SNV","G","A","Heterozygous",12,23,52.17,1,11,4,0.27,37.92,15,31,6,5,0.83,0.27,0.55,"no","A/G","No",1,90.49,"XP_015835028.1:c.[1894G>A]; XP_015835027.1:c.[1900G>A]; XP_015835029.1:c.[1849G>A]","XP_015835028.1:p.[Asp632Asn]; XP_015835027.1:p.[Asp634Asn]; XP_015835029.1:p.[Asp617Asn]","LOC663529",663529,null,"663529 [Gene Symbol: LOC663529] [Locus Tag: TcasGA2_TC008487] [Chromosome: LG4] [Map Location: ] [Description: double-stranded RNA-specific editase Adar] [Gene Type: protein-coding]","LOC663529; TcasGA2_TC008487"]
[478,"NC_007419.2",11515050,"SNV","G","C","Homozygous",21,21,100,1,10,14,0.42,37.48,24,24,10,11,null,1,1,"no","C/C","No",1,83.89,"XP_015834342.1:c.889C>G","XP_015834342.1:p.Gln297Glu","LOC103312883",103312883,null,"103312883 [Gene Symbol: LOC103312883] [Locus Tag: TcasGA2_TC007022] [Chromosome: LG4] [Map Location: ] [Description: piggyBac transposable element-derived protein 4] [Gene Type: protein-coding]","LOC103312883; TcasGA2_TC007022"]
[479,"NC_007419.2",11557552,"SNV","T","C","Heterozygous",14,21,66.67,1,10,10,0.5,35.93,20,30,6,9,1.08,0.96,1,"no","C/T","No",1,43.77,"XP_015835130.1:c.701T>C","XP_015835130.1:p.Val234Ala","LOC107397869",107397869,null,"107397869 [Gene Symbol: LOC107397869] [Locus Tag: TcasGA2_TC032951] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397869] [Gene Type: protein-coding]","LOC107397869; TcasGA2_TC032951"]
[480,"NC_007419.2",11564282,"SNV","G","A","Heterozygous",7,27,25.93,0.98,7,3,0.3,34.29,10,31,4,6,-1.19,0.64,0.34,"no","A/G","No",1,17.12,"XP_015835131.1:c.655G>A","XP_015835131.1:p.Ala219Thr","LOC107397870",107397870,null,"107397870 [Gene Symbol: LOC107397870] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397870] [Gene Type: protein-coding]","LOC107397870"]
[481,"NC_007419.2",12114095,"SNV","A","G","Homozygous",22,22,100,1,4,18,0.18,38.23,22,22,6,8,null,1,1,"no","G/G","No",1,86.9,"XP_008192443.1:c.[2410A>G]; XP_015835128.1:c.[1756A>G]","XP_008192443.1:p.[Arg804Gly]; XP_015835128.1:p.[Arg586Gly]","LOC657330, LOC657408","657330 , 657408",null,"657330 [Gene Symbol: LOC657330] [Locus Tag: TcasGA2_TC008519] [Chromosome: LG4] [Map Location: ] [Description: DNA polymerase subunit gamma-1, mitochondrial] [Gene Type: protein-coding] || 657408 [Gene Symbol: LOC657408] [Locus Tag: TcasGA2_TC008520] [Chromosome: LG4] [Map Location: ] [Description: probable RNA-binding protein EIF1AD] [Gene Type: protein-coding]","LOC657330; TcasGA2_TC008519 || TcasGA2_TC008520; LOC657408"]
[482,"NC_007420.3",489046,"SNV","T","C","Homozygous",20,20,100,1,14,9,0.39,35.65,23,23,6,12,null,1,1,"no","C/C","No",1,80.88,"XP_008192910.2:c.283A>G","XP_008192910.2:p.Arg95Gly","LOC658423",658423,null,"658423 [Gene Symbol: LOC658423] [Locus Tag: TcasGA2_TC013905] [Chromosome: LG5] [Map Location: ] [Description: dnaJ protein homolog 1] [Gene Type: protein-coding]","LOC658423; TcasGA2_TC013905"]
[483,"NC_007420.3",1711116,"SNV","G","T","Heterozygous",10,20,50,1,10,0,0,39.4,10,20,1,6,0.49,0.12,0.22,"no","G/T","No",1,79.33,"XP_008199327.1:c.[639C>A]; XP_008199326.1:c.[639C>A]; XP_008199325.1:c.[639C>A]; XP_015835546.1:c.[639C>A]","XP_008199327.1:p.[Phe213Leu]; XP_008199326.1:p.[Phe213Leu]; XP_008199325.1:p.[Phe213Leu]; XP_015835546.1:p.[Phe213Leu]","LOC103314630",103314630,null,"103314630 [Gene Symbol: LOC103314630] [Locus Tag: TcasGA2_TC010898] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314630; TcasGA2_TC010898"]
[484,"NC_007420.3",1901261,"SNV","G","A","Homozygous",22,22,100,1,17,7,0.29,38.18,24,24,11,13,null,1,1,"no","A/A","No",1,88.51,"XP_970755.2:c.1529G>A","XP_970755.2:p.Ser510Asn","LOC659345",659345,null,"659345 [Gene Symbol: LOC659345] [Locus Tag: TcasGA2_TC010952] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC659345] [Gene Type: protein-coding]","TcasGA2_TC010952; LOC659345"]
[485,"NC_007420.3","1901382..1901383","MNV","GA","AG","Homozygous",24,24,100,1,14,12,0.46,38.37,26,26,11,14,null,1,1,"no","AG/AG","No",1,200,"XP_970755.2:c.1650_1651delGAinsAG","XP_970755.2:p.Ile551Val","LOC659345",659345,null,"659345 [Gene Symbol: LOC659345] [Locus Tag: TcasGA2_TC010952] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC659345] [Gene Type: protein-coding]","TcasGA2_TC010952; LOC659345"]
[486,"NC_007420.3",2168970,"SNV","T","C","Homozygous",29,29,100,1,9,23,0.28,37.48,32,32,9,18,null,1,1,"no","C/C","No",1,107.96,"XP_966990.1:c.125T>C","XP_966990.1:p.Ile42Thr","LOC655357",655357,null,"655357 [Gene Symbol: LOC655357] [Locus Tag: TcasGA2_TC013884] [Chromosome: LG5] [Map Location: ] [Description: ATP-binding cassette sub-family F member 2] [Gene Type: protein-coding]","TcasGA2_TC013884; LOC655357"]
[487,"NC_007420.3",2578354,"SNV","C","T","Homozygous",21,21,100,1,13,19,0.41,38.67,32,32,11,11,null,1,1,"no","T/T","No",1,85.53,"XP_968359.1:c.2239C>T","XP_968359.1:p.Leu747Phe","LOC656759",656759,null,"656759 [Gene Symbol: LOC656759] [Locus Tag: TcasGA2_TC013932] [Chromosome: LG5] [Map Location: ] [Description: ubiquitin-protein ligase E3C] [Gene Type: protein-coding]","TcasGA2_TC013932; LOC656759"]
[488,"NC_007420.3",2610619,"SNV","A","G","Homozygous",21,21,100,1,9,14,0.39,37.52,23,23,12,11,null,1,1,"no","G/G","No",1,83.89,"XP_968889.1:c.1469A>G","XP_968889.1:p.Asn490Ser","LOC657331",657331,null,"657331 [Gene Symbol: LOC657331] [Locus Tag: TcasGA2_TC013937] [Chromosome: LG5] [Map Location: ] [Description: large subunit GTPase 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC013937; LOC657331"]
[489,"NC_007420.3",2634075,"SNV","A","G","Homozygous",20,20,100,1,8,14,0.36,37.45,22,22,8,11,null,1,1,"no","G/G","No",1,80.88,"XP_008192953.1:c.398A>G","XP_008192953.1:p.Lys133Arg","LOC658038",658038,null,"658038 [Gene Symbol: LOC658038] [Locus Tag: TcasGA2_TC013942] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 7] [Gene Type: protein-coding]","LOC658038; TcasGA2_TC013942"]
[490,"NC_007420.3",2634428,"SNV","C","T","Heterozygous",8,26,30.77,1,8,0,0,36.25,8,26,1,7,-0.33,0.02,0.77,"no","C/T","No",1,42.49,"XP_008192953.1:c.751C>T","XP_008192953.1:p.Pro251Ser","LOC658038",658038,null,"658038 [Gene Symbol: LOC658038] [Locus Tag: TcasGA2_TC013942] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 7] [Gene Type: protein-coding]","LOC658038; TcasGA2_TC013942"]
[491,"NC_007420.3",2668238,"SNV","G","A","Heterozygous",5,21,23.81,0.99,1,5,0.17,34,6,22,3,3,-2.44,0.02,0.12,"no","A/G","No",1,18.37,"XP_008192962.1:c.[973G>A]; XP_008192961.1:c.[973G>A]","XP_008192962.1:p.[Ala325Thr]; XP_008192961.1:p.[Ala325Thr]","LOC658500",658500,null,"658500 [Gene Symbol: LOC658500] [Locus Tag: TcasGA2_TC013944] [Chromosome: LG5] [Map Location: ] [Description: histone deacetylase complex subunit SAP130] [Gene Type: protein-coding]","TcasGA2_TC013944; LOC658500"]
[492,"NC_007420.3",2755345,"SNV","G","A","Homozygous",22,22,100,1,17,10,0.37,36.55,27,27,11,13,null,1,1,"no","A/A","No",1,88.51,"XP_008192963.1:c.2011G>A","XP_008192963.1:p.Val671Met","LOC658725",658725,null,"658725 [Gene Symbol: LOC658725] [Locus Tag: TcasGA2_TC013946] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC658725; TcasGA2_TC013946"]
[493,"NC_007420.3",2763871,"SNV","G","A","Homozygous",22,22,100,1,22,6,0.21,37.23,28,28,9,18,null,1,1,"no","A/A","No",1,88.51,"XP_970377.1:c.[1037C>T]; XP_008192964.1:c.[1034C>T]","XP_970377.1:p.[Thr346Ile]; XP_008192964.1:p.[Thr345Ile]","LOC658937",658937,null,"658937 [Gene Symbol: LOC658937] [Locus Tag: TcasGA2_TC013862] [Chromosome: LG5] [Map Location: ] [Description: protein painting of fourth] [Gene Type: protein-coding]","LOC658937; TcasGA2_TC013862"]
[494,"NC_007420.3",2764740,"SNV","C","A","Homozygous",23,23,100,1,9,17,0.35,37.35,26,26,11,11,null,1,1,"no","A/A","No",1,91.52,"XP_970377.1:c.[290G>T]; XP_008192964.1:c.[287G>T]","XP_970377.1:p.[Arg97Ile]; XP_008192964.1:p.[Arg96Ile]","LOC658937",658937,null,"658937 [Gene Symbol: LOC658937] [Locus Tag: TcasGA2_TC013862] [Chromosome: LG5] [Map Location: ] [Description: protein painting of fourth] [Gene Type: protein-coding]","LOC658937; TcasGA2_TC013862"]
[495,"NC_007420.3",3310498,"SNV","C","A","Heterozygous",7,24,29.17,1,0,7,0,40.57,7,24,3,1,2.57,0.05,0.43,"no","A/C","No",1,30.69,"XP_008192973.1:c.1346C>A","XP_008192973.1:p.Thr449Asn","LOC103312902",103312902,null,"103312902 [Gene Symbol: LOC103312902] [Locus Tag: TcasGA2_TC013973] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312902] [Gene Type: protein-coding]","LOC103312902; TcasGA2_TC013973"]
[496,"NC_007420.3",3413313,"SNV","G","A","Homozygous",21,21,100,1,11,14,0.44,36.71,25,25,8,13,null,1,1,"no","A/A","No",1,85.5,"XP_008192979.1:c.137G>A","XP_008192979.1:p.Arg46Gln","LOC103312905",103312905,null,"103312905 [Gene Symbol: LOC103312905] [Locus Tag: TcasGA2_TC013978] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC013978; LOC103312905"]
[497,"NC_007420.3",3550077,"SNV","T","C","Homozygous",33,33,100,1,16,19,0.46,37.61,35,35,15,21,null,1,1,"no","C/C","No",1,120,"XP_966808.3:c.497A>G","XP_966808.3:p.Lys166Arg","LOC655199",655199,null,"655199 [Gene Symbol: LOC655199] [Locus Tag: TcasGA2_TC013829] [Chromosome: LG5] [Map Location: ] [Description: putative thiosulfate sulfurtransferase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC013829; LOC655199"]
[498,"NC_007420.3",3550079,"SNV","T","A","Homozygous",32,32,100,1,16,21,0.43,37.22,37,37,13,22,null,1,1,"no","A/A","No",1,118.59,"XP_966808.3:c.495A>T","XP_966808.3:p.Lys165Asn","LOC655199",655199,null,"655199 [Gene Symbol: LOC655199] [Locus Tag: TcasGA2_TC013829] [Chromosome: LG5] [Map Location: ] [Description: putative thiosulfate sulfurtransferase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC013829; LOC655199"]
[499,"NC_007420.3",3598527,"SNV","T","C","Homozygous",21,21,100,1,20,7,0.26,37.14,27,27,8,14,null,1,1,"no","C/C","No",1,83.89,"XP_015835221.1:c.652A>G","XP_015835221.1:p.Lys218Glu","LOC656096",656096,null,"656096 [Gene Symbol: LOC656096] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC656096] [Gene Type: protein-coding]","LOC656096"]
[500,"NC_007420.3",3598532,"SNV","G","C","Homozygous",20,20,100,1,19,8,0.3,36.65,27,27,9,14,null,1,1,"no","C/C","No",1,80.88,"XP_015835221.1:c.647C>G","XP_015835221.1:p.Ala216Gly","LOC656096",656096,null,"656096 [Gene Symbol: LOC656096] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC656096] [Gene Type: protein-coding]","LOC656096"]
[501,"NC_007420.3",3880872,"SNV","T","G","Homozygous",27,27,100,1,13,14,0.48,35.52,27,27,10,12,null,1,1,"no","G/G","No",1,101.95,"XP_015835500.1:c.[2825A>C]; XP_008193024.1:c.[2825A>C]; XP_015835499.1:c.[2825A>C]; XP_015835502.1:c.[2753A>C]","XP_015835500.1:p.[Asn942Thr]; XP_008193024.1:p.[Asn942Thr]; XP_015835499.1:p.[Asn942Thr]; XP_015835502.1:p.[Asn918Thr]","LOC103312925",103312925,null,"103312925 [Gene Symbol: LOC103312925] [Locus Tag: TcasGA2_TC013796] [Chromosome: LG5] [Map Location: ] [Description: DNA N6-methyl adenine demethylase] [Gene Type: protein-coding]","LOC103312925; TcasGA2_TC013796"]
[502,"NC_007420.3",4246932,"SNV","G","A","Heterozygous",10,21,47.62,1,6,10,0.38,37.6,16,27,3,2,-0.63,0.02,1,"no","A/G","No",1,81.76,"XP_008193052.1:c.931G>A","XP_008193052.1:p.Val311Ile","LOC660537",660537,null,"660537 [Gene Symbol: LOC660537] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: protein 60A-like] [Gene Type: protein-coding]","LOC660537"]
[503,"NC_007420.3",4247022,"SNV","C","A","Heterozygous",10,21,47.62,1,10,1,0.09,40,11,23,4,9,2.78,0.12,0.1,"no","A/C","No",1,77.36,"XP_008193052.1:c.1021C>A","XP_008193052.1:p.Leu341Ile","LOC660537",660537,null,"660537 [Gene Symbol: LOC660537] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: protein 60A-like] [Gene Type: protein-coding]","LOC660537"]
[504,"NC_007420.3",4247061,"SNV","T","G","Heterozygous",12,20,60,1,10,4,0.29,37,14,23,7,9,-3.32,0.55,0.54,"no","G/T","No",1,54.5,"XP_008193052.1:c.1060T>G","XP_008193052.1:p.Phe354Val","LOC660537",660537,null,"660537 [Gene Symbol: LOC660537] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: protein 60A-like] [Gene Type: protein-coding]","LOC660537"]
[505,"NC_007420.3",4505408,"SNV","G","A","Heterozygous",5,20,25,0.99,0,5,0,39.8,5,25,1,1,1.48,0.02,0.19,"no","A/G","No",1,21.06,"XP_008193073.1:c.[574G>A]; XP_008193074.1:c.[490G>A]","XP_008193073.1:p.[Asp192Asn]; XP_008193074.1:p.[Asp164Asn]","LOC661633",661633,null,"661633 [Gene Symbol: LOC661633] [Locus Tag: TcasGA2_TC014030] [Chromosome: LG5] [Map Location: ] [Description: sodium/potassium-transporting ATPase subunit beta-2] [Gene Type: protein-coding]","LOC661633; TcasGA2_TC014030"]
[506,"NC_007420.3",4737481,"SNV","G","T","Heterozygous",7,29,24.14,0.98,0,7,0,39.71,7,30,1,2,0.99,0.27,0.45,"no","G/T","No",1,16.75,"XP_008193109.1:c.[1163C>A]; XP_008193113.1:c.[1103C>A]; XP_973425.2:c.[1121C>A]; XP_008193111.1:c.[1103C>A]; XP_008193110.1:c.[1163C>A]; XP_008193112.1:c.[1163C>A]","XP_008193109.1:p.[Ala388Glu]; XP_008193113.1:p.[Ala368Glu]; XP_973425.2:p.[Ala374Glu]; XP_008193111.1:p.[Ala368Glu]; XP_008193110.1:p.[Ala388Glu]; XP_008193112.1:p.[Ala388Glu]","LOC662219",662219,null,"662219 [Gene Symbol: LOC662219] [Locus Tag: TcasGA2_TC030624] [Chromosome: LG5] [Map Location: ] [Description: 2-oxoglutarate dehydrogenase, mitochondrial] [Gene Type: protein-coding]","LOC662219; TcasGA2_TC030624"]
[507,"NC_007420.3",4952647,"SNV","C","T","Homozygous",24,24,100,1,7,20,0.26,38.38,27,27,13,15,null,1,1,"no","T/T","No",1,94.55,"XP_008193134.1:c.4867G>A","XP_008193134.1:p.Ala1623Thr","LOC662874",662874,null,"662874 [Gene Symbol: LOC662874] [Locus Tag: TcasGA2_TC013742] [Chromosome: LG5] [Map Location: ] [Description: myosin 7B] [Gene Type: protein-coding]","Myo7B; LOC662874; TcasGA2_TC013742"]
[508,"NC_007420.3",4972231,"SNV","A","G","Heterozygous",21,29,72.41,1,21,0,0,36.67,21,29,5,10,-1.98,0.87,0.53,"no","A/G","No",1,34.2,"XP_008193139.1:c.545A>G","XP_008193139.1:p.Glu182Gly","LOC100142353",100142353,null,"100142353 [Gene Symbol: LOC100142353] [Locus Tag: TcasGA2_TC014053] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC100142353] [Gene Type: protein-coding]","LOC100142353; TcasGA2_TC014053"]
[509,"NC_007420.3",4996279,"SNV","C","G","Homozygous",22,22,100,1,17,12,0.41,36.73,29,29,9,15,null,1,1,"no","G/G","No",1,86.9,"NP_001164247.1:c.475C>G","NP_001164247.1:p.Pro159Ala","Fz",663095,"frizzled","663095 [Gene Symbol: Fz] [Locus Tag: TcasGA2_TC014055] [Chromosome: LG5] [Map Location: ] [Description: frizzled] [Gene Type: protein-coding]","Fz; GLEAN_14055; TcasGA2_TC014055"]
[510,"NC_007420.3",5412971,"SNV","A","G","Homozygous",23,23,100,1,17,11,0.39,37.17,28,28,11,14,null,1,1,"no","G/G","No",1,89.91,"XP_015835439.1:c.[1317+1741T>C]; XP_015835437.1:c.[1485+1741T>C]; XP_015835438.1:c.[1317+1741T>C]; XP_015835432.1:c.[1515+1741T>C]; XP_015835434.1:c.[1485+1741T>C]; XP_015835433.1:c.[1485+1741T>C]; XP_015835435.1:c.[1485+1741T>C]; XP_008193194.1:c.[358A>G]; XP_015835440.1:c.[1266+1741T>C]","XP_008193194.1:p.Ser120Gly","LOC655273, LOC103312978","655273 , 103312978",null,"655273 [Gene Symbol: LOC655273] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: adenylate cyclase type 8] [Gene Type: protein-coding] || 103312978 [Gene Symbol: LOC103312978] [Locus Tag: TcasGA2_TC014080] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC655273 || LOC103312978; TcasGA2_TC014080"]
[511,"NC_007420.3",5427176,"SNV","G","A","Homozygous",27,29,93.1,1,8,21,0.28,38.26,29,31,8,10,null,0.96,0.99,"no","A/A","No",1,43.88,"XP_008193174.2:c.[1556-2548C>T]; XP_015835278.1:c.[7295C>T]; XP_015835280.1:c.[1437-2548C>T]","XP_015835278.1:p.Thr2432Ile","LOC655359, LOC107397896","655359 , 107397896",null,"655359 [Gene Symbol: LOC655359] [Locus Tag: TcasGA2_TC013716] [Chromosome: LG5] [Map Location: ] [Description: FERM, RhoGEF and pleckstrin domain-containing protein 1] [Gene Type: protein-coding] || 107397896 [Gene Symbol: LOC107397896] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","TcasGA2_TC013716; LOC655359 || LOC107397896"]
[512,"NC_007420.3",5434310,"SNV","A","G","Homozygous",24,24,100,1,0,24,0,38.21,24,24,4,4,null,1,1,"no","G/G","No",1,92.92,"XP_015835278.1:c.[161T>C]; XP_015835280.1:c.[1436+190T>C]; XP_008193174.2:c.[1555+190T>C]","XP_015835278.1:p.Ile54Thr","LOC655359, LOC107397896","655359 , 107397896",null,"655359 [Gene Symbol: LOC655359] [Locus Tag: TcasGA2_TC013716] [Chromosome: LG5] [Map Location: ] [Description: FERM, RhoGEF and pleckstrin domain-containing protein 1] [Gene Type: protein-coding] || 107397896 [Gene Symbol: LOC107397896] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","TcasGA2_TC013716; LOC655359 || LOC107397896"]
[513,"NC_007420.3",5666728,"SNV","A","G","Homozygous",21,21,100,1,19,8,0.3,38.33,27,27,9,12,null,1,1,"no","G/G","No",1,83.89,"XP_008193225.1:c.6275A>G","XP_008193225.1:p.Glu2092Gly","LOC100142258",100142258,null,"100142258 [Gene Symbol: LOC100142258] [Locus Tag: TcasGA2_TC014099] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC100142258] [Gene Type: protein-coding]","TcasGA2_TC014099; LOC100142258"]
[514,"NC_007420.3",6444795,"SNV","C","T","Homozygous",20,20,100,1,16,13,0.45,39.7,29,29,9,11,null,1,1,"no","T/T","No",1,82.52,"XP_008193300.1:c.1909G>A","XP_008193300.1:p.Asp637Asn","LOC103312995",103312995,null,"103312995 [Gene Symbol: LOC103312995] [Locus Tag: TcasGA2_TC013670] [Chromosome: LG5] [Map Location: ] [Description: cubilin] [Gene Type: protein-coding]","TcasGA2_TC013670; LOC103312995"]
[515,"NC_007420.3",7107809,"SNV","A","C","Homozygous",27,27,100,1,15,20,0.43,38.67,35,35,14,21,null,1,1,"no","C/C","No",1,101.95,"XP_008193189.2:c.76T>G","XP_008193189.2:p.Ser26Ala","LOC103312975",103312975,null,"103312975 [Gene Symbol: LOC103312975] [Locus Tag: TcasGA2_TC013645] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312975; TcasGA2_TC013645"]
[516,"NC_007420.3",7107820,"SNV","G","C","Heterozygous",12,28,42.86,1,7,7,0.5,38.58,14,37,6,8,0.44,0.4,0.94,"no","C/G","No",1,88.77,"XP_008193189.2:c.65C>G","XP_008193189.2:p.Ser22Cys","LOC103312975",103312975,null,"103312975 [Gene Symbol: LOC103312975] [Locus Tag: TcasGA2_TC013645] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312975; TcasGA2_TC013645"]
[517,"NC_007420.3","7110982..7110983","MNV","CA","TG","Heterozygous",11,20,55,1,4,7,0.36,38.99,11,23,7,7,null,0.44,0.98,"no","complex","No",1,200,"XP_008193190.1:c.56_57delTGinsCA","XP_008193190.1:p.Val19Ala","LOC103312976",103312976,null,"103312976 [Gene Symbol: LOC103312976] [Locus Tag: TcasGA2_TC013644] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312976] [Gene Type: protein-coding]","LOC103312976; TcasGA2_TC013644"]
[518,"NC_007420.3",7110983,"SNV","A","G","Heterozygous",9,20,45,1,3,9,0.25,36.17,12,23,6,8,null,0.41,0.98,"no","complex","No",1,200,"XP_008193190.1:c.56T>C","XP_008193190.1:p.Val19Ala","LOC103312976",103312976,null,"103312976 [Gene Symbol: LOC103312976] [Locus Tag: TcasGA2_TC013644] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312976] [Gene Type: protein-coding]","LOC103312976; TcasGA2_TC013644"]
[519,"NC_007420.3",7320763,"SNV","G","C","Homozygous",20,20,100,1,17,12,0.41,35.5,29,29,13,11,null,1,1,"no","C/C","No",1,80.88,"XP_015835274.1:c.688G>C","XP_015835274.1:p.Glu230Gln","LOC103314913",103314913,null,"103314913 [Gene Symbol: LOC103314913] [Locus Tag: TcasGA2_TC010439] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103314913] [Gene Type: protein-coding]","LOC103314913; TcasGA2_TC010439"]
[520,"NC_007420.3",7387555,"SNV","C","G","Homozygous",22,22,100,1,4,18,0.18,38.91,22,22,9,12,null,1,1,"no","G/G","No",1,86.9,"XP_971438.1:c.[1895C>G]; XP_008200443.1:c.[1895C>G]; XP_015835401.1:c.[1895C>G]","XP_971438.1:p.[Thr632Ser]; XP_008200443.1:p.[Thr632Ser]; XP_015835401.1:p.[Thr632Ser]","LOC660083",660083,null,"660083 [Gene Symbol: LOC660083] [Locus Tag: TcasGA2_TC010445] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC660083] [Gene Type: protein-coding]","TcasGA2_TC010445; LOC660083"]
[521,"NC_007420.3",7518311,"SNV","G","T","Homozygous",31,31,100,1,29,13,0.31,37.71,42,42,11,15,null,1,1,"no","T/T","No",1,115.62,"NP_001076794.1:c.[656G>T]; XP_008200421.1:c.[656G>T]","NP_001076794.1:p.[Arg219Leu]; XP_008200421.1:p.[Arg219Leu]","Cry2",661402,"cryptochrome 2","661402 [Gene Symbol: Cry2] [Locus Tag: TcasGA2_TC010454] [Chromosome: LG5] [Map Location: ] [Description: cryptochrome 2] [Gene Type: protein-coding]","Cry2; TcasGA2_TC010454"]
[522,"NC_007420.3",7883966,"SNV","A","G","Homozygous",22,22,100,1,21,9,0.3,36.18,30,30,12,17,null,1,1,"no","G/G","No",1,86.9,"XP_008200509.1:c.[1927A>G]; XP_008200511.1:c.[1927A>G]; XP_008200513.1:c.[1636A>G]; XP_008200510.1:c.[1927A>G]; XP_015835345.1:c.[2239A>G]; XP_008200512.1:c.[1759A>G]; XP_015835346.1:c.[1843A>G]; XP_015835347.1:c.[1759A>G]; XP_008200508.1:c.[2200A>G]","XP_008200509.1:p.[Thr643Ala]; XP_008200511.1:p.[Thr643Ala]; XP_008200513.1:p.[Thr546Ala]; XP_008200510.1:p.[Thr643Ala]; XP_015835345.1:p.[Thr747Ala]; XP_008200512.1:p.[Thr587Ala]; XP_015835346.1:p.[Thr615Ala]; XP_015835347.1:p.[Thr587Ala]; XP_008200508.1:p.[Thr734Ala]","LOC662427",662427,null,"662427 [Gene Symbol: LOC662427] [Locus Tag: TcasGA2_TC010468] [Chromosome: LG5] [Map Location: ] [Description: fibronectin type-III domain-containing protein 3A] [Gene Type: protein-coding]","LOC662427; TcasGA2_TC010468"]
[523,"NC_007420.3",8083767,"SNV","A","G","Homozygous",24,24,100,1,6,23,0.21,37.96,29,29,10,12,null,1,1,"no","G/G","No",1,92.92,"XP_976183.1:c.961A>G","XP_976183.1:p.Ile321Val","LOC656350",656350,null,"656350 [Gene Symbol: LOC656350] [Locus Tag: TcasGA2_TC014259] [Chromosome: LG5] [Map Location: ] [Description: cell division cycle-associated protein 3] [Gene Type: protein-coding]","TcasGA2_TC014259; LOC656350"]
[524,"NC_007420.3",8153382,"SNV","G","A","Homozygous",23,23,100,1,14,12,0.46,36.39,26,26,11,15,null,1,1,"no","A/A","No",1,91.52,"XP_015836133.1:c.1004G>A","XP_015836133.1:p.Ser335Asn","LOC103313085",103313085,null,"103313085 [Gene Symbol: LOC103313085] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: stromelysin-1-like] [Gene Type: protein-coding]","LOC103313085"]
[525,"NC_007420.3",8208893,"SNV","G","T","Heterozygous",8,23,34.78,1,2,8,0.2,38.75,10,25,1,4,2.97,0.06,0.56,"no","G/T","No",1,46.15,"XP_008193638.1:c.944G>T","XP_008193638.1:p.Gly315Val","LOC103313086",103313086,null,"103313086 [Gene Symbol: LOC103313086] [Locus Tag: TcasGA2_TC014267] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313086] [Gene Type: protein-coding]","LOC103313086; TcasGA2_TC014267"]
[526,"NC_007420.3",8534853,"SNV","C","T","Homozygous",23,23,100,1,19,6,0.24,36.7,25,25,15,12,null,1,1,"no","T/T","No",1,91.55,"XP_972525.1:c.188G>A","XP_972525.1:p.Ser63Asn","LOC661260",661260,null,"661260 [Gene Symbol: LOC661260] [Locus Tag: TcasGA2_TC013515] [Chromosome: LG5] [Map Location: ] [Description: sorting nexin-21] [Gene Type: protein-coding]","TcasGA2_TC013515; LOC661260"]
[527,"NC_007420.3",8535697,"SNV","T","A","Homozygous",29,29,100,1,24,9,0.27,36.38,33,33,12,18,null,1,1,"no","A/A","No",1,109.57,"XP_008193695.1:c.214T>A","XP_008193695.1:p.Leu72Ile","LOC103313099",103313099,null,"103313099 [Gene Symbol: LOC103313099] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: solute carrier family 25 member 51] [Gene Type: protein-coding]","LOC103313099"]
[528,"NC_007420.3",8694767,"SNV","C","T","Homozygous",17,20,85,0.66,15,5,0.25,35.35,20,23,11,13,null,0.9,0.92,"no","T/T","No",1,4.72,"XP_972996.1:c.307G>A","XP_972996.1:p.Gly103Ser","LOC661762",661762,null,"661762 [Gene Symbol: LOC661762] [Locus Tag: TcasGA2_TC013505] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC661762] [Gene Type: protein-coding]","LOC661762; TcasGA2_TC013505"]
[529,"NC_007420.3",8718780,"SNV","T","C","Homozygous",19,21,90.48,0.99,11,8,0.42,36.79,19,21,7,9,null,0.93,1,"no","C/C","No",1,21.65,"XP_008193708.1:c.2161A>G","XP_008193708.1:p.Ile721Val","LOC652943",652943,null,"652943 [Gene Symbol: LOC652943] [Locus Tag: TcasGA2_TC013502] [Chromosome: LG5] [Map Location: ] [Description: rab3 GTPase-activating protein catalytic subunit] [Gene Type: protein-coding]","TcasGA2_TC013502; LOC652943; Sal"]
[530,"NC_007420.3",8735236,"SNV","C","T","Heterozygous",5,22,22.73,0.97,3,5,0.38,37.4,8,31,4,3,-0.2,0.67,0.62,"no","C/T","No",1,15.56,"XP_008193708.1:c.782G>A","XP_008193708.1:p.Gly261Asp","LOC652943",652943,null,"652943 [Gene Symbol: LOC652943] [Locus Tag: TcasGA2_TC013502] [Chromosome: LG5] [Map Location: ] [Description: rab3 GTPase-activating protein catalytic subunit] [Gene Type: protein-coding]","TcasGA2_TC013502; LOC652943; Sal"]
[531,"NC_007420.3",8926167,"SNV","A","G","Heterozygous",5,20,25,0.99,2,3,0.4,37,5,27,3,3,0.04,0.28,0.99,"no","A/G","No",1,22.6,"XP_973566.1:c.781A>G","XP_973566.1:p.Lys261Glu","LOC662373",662373,null,"662373 [Gene Symbol: LOC662373] [Locus Tag: TcasGA2_TC014309] [Chromosome: LG5] [Map Location: ] [Description: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC014309; LOC662373"]
[532,"NC_007420.3",8928834,"SNV","A","C","Heterozygous",6,22,27.27,1,3,6,0.33,37.33,9,31,1,4,0.88,0.08,0.77,"no","A/C","No",1,31.48,"XP_973596.2:c.1453A>C","XP_973596.2:p.Thr485Pro","LOC662406",662406,null,"662406 [Gene Symbol: LOC662406] [Locus Tag: TcasGA2_TC014310] [Chromosome: LG5] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD2] [Gene Type: protein-coding]","TcasGA2_TC014310; LOC662406"]
[533,"NC_007420.3",8928844,"SNV","C","A","Heterozygous",10,25,40,1,0,10,0,36.2,10,31,3,6,0.44,0.28,0.11,"no","A/C","No",1,66.28,"XP_973596.2:c.1463C>A","XP_973596.2:p.Thr488Asn","LOC662406",662406,null,"662406 [Gene Symbol: LOC662406] [Locus Tag: TcasGA2_TC014310] [Chromosome: LG5] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD2] [Gene Type: protein-coding]","TcasGA2_TC014310; LOC662406"]
[534,"NC_007420.3",8935582,"SNV","G","A","Heterozygous",7,20,35,1,6,2,0.25,39.86,8,21,4,6,2.5,0.16,0.68,"no","A/G","No",1,46.5,"XP_973661.1:c.443G>A","XP_973661.1:p.Arg148Lys","LOC662476",662476,null,"662476 [Gene Symbol: LOC662476] [Locus Tag: TcasGA2_TC014311] [Chromosome: LG5] [Map Location: ] [Description: 39S ribosomal protein L3, mitochondrial] [Gene Type: protein-coding]","LOC662476; TcasGA2_TC014311"]
[535,"NC_007420.3",9026817,"SNV","G","T","Heterozygous",12,37,32.43,1,12,0,0,35.75,12,37,1,8,-1.82,0.05,0.3,"no","G/T","No",1,58.15,"NP_001096056.1:c.241C>A","NP_001096056.1:p.Pro81Thr","Ddc",662962,"dopa decarboxylase","662962 [Gene Symbol: Ddc] [Locus Tag: TcasGA2_TC013480] [Chromosome: LG5] [Map Location: ] [Description: dopa decarboxylase] [Gene Type: protein-coding]","TcasGA2_TC013480; Ddc"]
[536,"NC_007420.3",9026941,"SNV","T","C","Heterozygous",6,25,24,0.99,0,6,0,35,6,25,1,2,-0.38,0.7,1,"no","C/T","No",1,21.49,"NP_001096056.1:c.169A>G","NP_001096056.1:p.Met57Val","Ddc",662962,"dopa decarboxylase","662962 [Gene Symbol: Ddc] [Locus Tag: TcasGA2_TC013480] [Chromosome: LG5] [Map Location: ] [Description: dopa decarboxylase] [Gene Type: protein-coding]","TcasGA2_TC013480; Ddc"]
[537,"NC_007420.3",9035529,"SNV","A","G","Homozygous",20,20,100,1,13,18,0.42,35.95,31,31,11,10,null,1,1,"no","G/G","No",1,80.88,"XP_974250.1:c.[1007T>C]; XP_974277.2:c.[422+614A>G]","XP_974250.1:p.Leu336Ser","LOC663123, LOC663096","663123 , 663096",null,"663123 [Gene Symbol: LOC663123] [Locus Tag: TcasGA2_TC014320] [Chromosome: LG5] [Map Location: ] [Description: cGMP-dependent protein kinase 1] [Gene Type: protein-coding] || 663096 [Gene Symbol: LOC663096] [Locus Tag: TcasGA2_TC013478] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663096] [Gene Type: protein-coding]","LOC663123; TcasGA2_TC014320 || TcasGA2_TC013478; LOC663096"]
[538,"NC_007420.3",9089409,"SNV","A","G","Homozygous",20,20,100,1,10,14,0.42,37.6,24,24,8,12,null,1,1,"no","G/G","No",1,80.88,"XP_008193734.1:c.5255T>C","XP_008193734.1:p.Phe1752Ser","LOC103313111",103313111,null,"103313111 [Gene Symbol: LOC103313111] [Locus Tag: TcasGA2_TC013472] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC013472; LOC103313111"]
[539,"NC_007420.3",9090159,"SNV","A","T","Homozygous",22,22,100,1,13,11,0.46,36.09,24,24,13,14,null,1,1,"no","T/T","No",1,88.54,"XP_008193734.1:c.4505T>A","XP_008193734.1:p.Val1502Asp","LOC103313111",103313111,null,"103313111 [Gene Symbol: LOC103313111] [Locus Tag: TcasGA2_TC013472] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC013472; LOC103313111"]
[540,"NC_007420.3",9112203,"SNV","G","A","Homozygous",22,22,100,1,8,14,0.36,39.18,22,22,7,15,null,1,1,"no","A/A","No",1,88.51,"XP_015835630.1:c.1460G>A","XP_015835630.1:p.Gly487Asp","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[541,"NC_007420.3",9129248,"SNV","C","A","Homozygous",23,23,100,1,10,20,0.33,36.43,30,30,9,16,null,1,1,"no","A/A","No",1,91.52,"XP_008193737.1:c.1381C>A","XP_008193737.1:p.Pro461Thr","LOC103313112",103313112,null,"103313112 [Gene Symbol: LOC103313112] [Locus Tag: TcasGA2_TC014328] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313112; TcasGA2_TC014328"]
[542,"NC_007420.3",9129271,"SNV","C","A","Homozygous",21,21,100,1,6,19,0.24,38.71,25,25,7,14,null,1,1,"no","A/A","No",1,85.5,"XP_008193737.1:c.1404C>A","XP_008193737.1:p.Asp468Glu","LOC103313112",103313112,null,"103313112 [Gene Symbol: LOC103313112] [Locus Tag: TcasGA2_TC014328] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313112; TcasGA2_TC014328"]
[543,"NC_007420.3",9266857,"SNV","A","G","Homozygous",22,22,100,1,3,19,0.14,38.05,22,22,8,15,null,1,1,"no","G/G","No",1,86.9,"XP_008193748.1:c.[4201T>C]; XP_008193750.1:c.[4201T>C]; XP_008193749.1:c.[4198T>C]","XP_008193748.1:p.[Ser1401Pro]; XP_008193750.1:p.[Ser1401Pro]; XP_008193749.1:p.[Ser1400Pro]","LOC663618",663618,null,"663618 [Gene Symbol: LOC663618] [Locus Tag: TcasGA2_TC013457] [Chromosome: LG5] [Map Location: ] [Description: 5'-3' exoribonuclease 1] [Gene Type: protein-coding]","TcasGA2_TC013457; XRN1; LOC663618"]
[544,"NC_007420.3",9269498,"SNV","A","T","Homozygous",21,21,100,1,8,16,0.33,38.33,24,24,7,16,null,1,1,"no","T/T","No",1,85.53,"XP_008193748.1:c.[2220T>A]; XP_008193749.1:c.[2220T>A]; XP_008193750.1:c.[2220T>A]","XP_008193748.1:p.[Asp740Glu]; XP_008193749.1:p.[Asp740Glu]; XP_008193750.1:p.[Asp740Glu]","LOC663618",663618,null,"663618 [Gene Symbol: LOC663618] [Locus Tag: TcasGA2_TC013457] [Chromosome: LG5] [Map Location: ] [Description: 5'-3' exoribonuclease 1] [Gene Type: protein-coding]","TcasGA2_TC013457; XRN1; LOC663618"]
[545,"NC_007420.3",9379601,"SNV","C","G","Homozygous",24,24,100,1,14,14,0.5,39.21,28,28,10,14,null,1,1,"no","G/G","No",1,92.92,"XP_008193526.1:c.1474C>G","XP_008193526.1:p.Pro492Ala","LOC654990",654990,null,"654990 [Gene Symbol: LOC654990] [Locus Tag: TcasGA2_TC014339] [Chromosome: LG5] [Map Location: ] [Description: nuclear pore complex protein Nup214] [Gene Type: protein-coding]","LOC654990; TcasGA2_TC014339"]
[546,"NC_007420.3",9381499,"SNV","G","A","Homozygous",23,23,100,1,14,9,0.39,38.57,23,23,11,11,null,1,1,"no","A/A","No",1,91.51,"XP_008193526.1:c.3271G>A","XP_008193526.1:p.Val1091Ile","LOC654990",654990,null,"654990 [Gene Symbol: LOC654990] [Locus Tag: TcasGA2_TC014339] [Chromosome: LG5] [Map Location: ] [Description: nuclear pore complex protein Nup214] [Gene Type: protein-coding]","LOC654990; TcasGA2_TC014339"]
[547,"NC_007420.3",9381514,"SNV","C","A","Heterozygous",7,21,33.33,1,0,7,0,40.86,7,22,1,1,2.16,0.01,0.04,"no","A/C","No",1,41.84,"XP_008193526.1:c.3286C>A","XP_008193526.1:p.Gln1096Lys","LOC654990",654990,null,"654990 [Gene Symbol: LOC654990] [Locus Tag: TcasGA2_TC014339] [Chromosome: LG5] [Map Location: ] [Description: nuclear pore complex protein Nup214] [Gene Type: protein-coding]","LOC654990; TcasGA2_TC014339"]
[548,"NC_007420.3",9383426,"SNV","A","G","Homozygous",24,24,100,1,11,20,0.35,37.71,31,31,9,11,null,1,1,"no","G/G","No",1,92.92,"XP_008193526.1:c.5198A>G","XP_008193526.1:p.Asn1733Ser","LOC654990",654990,null,"654990 [Gene Symbol: LOC654990] [Locus Tag: TcasGA2_TC014339] [Chromosome: LG5] [Map Location: ] [Description: nuclear pore complex protein Nup214] [Gene Type: protein-coding]","LOC654990; TcasGA2_TC014339"]
[549,"NC_007420.3",9426555,"SNV","C","A","Heterozygous",9,22,40.91,1,9,0,0,33.22,9,25,3,5,-1.97,0.05,0.28,"no","A/C","No",1,61.85,"XP_967425.2:c.1254C>A","XP_967425.2:p.Asp418Glu","LOC655770",655770,null,"655770 [Gene Symbol: LOC655770] [Locus Tag: TcasGA2_TC014342] [Chromosome: LG5] [Map Location: ] [Description: histone deacetylase 7] [Gene Type: protein-coding]","LOC655770; TcasGA2_TC014342"]
[550,"NC_007420.3",9426575,"SNV","C","A","Heterozygous",9,26,34.62,1,4,8,0.33,33.33,12,33,2,2,-2.91,0.31,0.95,"no","A/C","No",1,40.74,"XP_967425.2:c.1274C>A","XP_967425.2:p.Ala425Asp","LOC655770",655770,null,"655770 [Gene Symbol: LOC655770] [Locus Tag: TcasGA2_TC014342] [Chromosome: LG5] [Map Location: ] [Description: histone deacetylase 7] [Gene Type: protein-coding]","LOC655770; TcasGA2_TC014342"]
[551,"NC_007420.3",9426613,"SNV","C","A","Heterozygous",8,24,33.33,1,0,8,0,40.5,8,25,1,2,3.12,0.28,0.2,"no","A/C","No",1,43.46,"XP_967425.2:c.1312C>A","XP_967425.2:p.His438Asn","LOC655770",655770,null,"655770 [Gene Symbol: LOC655770] [Locus Tag: TcasGA2_TC014342] [Chromosome: LG5] [Map Location: ] [Description: histone deacetylase 7] [Gene Type: protein-coding]","LOC655770; TcasGA2_TC014342"]
[552,"NC_007420.3",9453965,"SNV","T","G","Homozygous",21,21,100,1,3,20,0.13,38.57,23,23,8,12,null,1,1,"no","G/G","No",1,83.89,"XP_967744.1:c.[1883T>G]; XP_008193535.1:c.[1928T>G]","XP_967744.1:p.[Leu628Arg]; XP_008193535.1:p.[Leu643Arg]","LOC656100",656100,null,"656100 [Gene Symbol: LOC656100] [Locus Tag: TcasGA2_TC014345] [Chromosome: LG5] [Map Location: ] [Description: flocculation protein FLO11] [Gene Type: protein-coding]","TcasGA2_TC014345; LOC656100"]
[553,"NC_007420.3",9465600,"SNV","C","T","Homozygous",20,20,100,1,7,13,0.35,39,20,20,6,10,null,1,1,"no","T/T","No",1,82.52,"XP_015836164.1:c.11C>T","XP_015836164.1:p.Ala4Val","LOC656351",656351,null,"656351 [Gene Symbol: LOC656351] [Locus Tag: TcasGA2_TC014347] [Chromosome: LG5] [Map Location: ] [Description: protein msta, isoform B] [Gene Type: protein-coding]","LOC656351; TcasGA2_TC014347"]
[554,"NC_007420.3",9466061,"SNV","A","G","Homozygous",21,21,100,1,11,20,0.35,35.43,31,31,11,11,null,1,1,"no","G/G","No",1,83.89,"XP_015836164.1:c.472A>G","XP_015836164.1:p.Ile158Val","LOC656351",656351,null,"656351 [Gene Symbol: LOC656351] [Locus Tag: TcasGA2_TC014347] [Chromosome: LG5] [Map Location: ] [Description: protein msta, isoform B] [Gene Type: protein-coding]","LOC656351; TcasGA2_TC014347"]
[555,"NC_007420.3",9469079,"SNV","C","G","Homozygous",28,28,100,1,15,14,0.48,38.21,29,29,14,18,null,1,1,"no","G/G","No",1,104.95,"XP_968058.1:c.373C>G","XP_968058.1:p.Gln125Glu","LOC656432",656432,null,"656432 [Gene Symbol: LOC656432] [Locus Tag: TcasGA2_TC014348] [Chromosome: LG5] [Map Location: ] [Description: beta-galactosidase-1-like protein 2] [Gene Type: protein-coding]","LOC656432; TcasGA2_TC014348"]
[556,"NC_007420.3",9754764,"SNV","T","C","Homozygous",18,22,81.82,0.65,6,13,0.32,38.44,19,23,5,8,0.47,0.95,1,"no","C/T","No",1,4.56,"XP_969549.2:c.925T>C","XP_969549.2:p.Phe309Leu","LOC658043",658043,null,"658043 [Gene Symbol: LOC658043] [Locus Tag: TcasGA2_TC014364] [Chromosome: LG5] [Map Location: ] [Description: aspartate aminotransferase, cytoplasmic] [Gene Type: protein-coding]","LOC658043; TcasGA2_TC014364"]
[557,"NC_007420.3",9853987,"SNV","C","A","Heterozygous",7,22,31.82,1,0,7,0,40.86,7,26,2,2,2.19,0.19,0.62,"no","A/C","No",1,36.27,"XP_008193553.2:c.4591G>T","XP_008193553.2:p.Asp1531Tyr","LOC658870",658870,null,"658870 [Gene Symbol: LOC658870] [Locus Tag: TcasGA2_TC013423] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC658870] [Gene Type: protein-coding]","LOC658870; TcasGA2_TC013423"]
[558,"NC_007420.3",9854007,"SNV","T","C","Homozygous",21,21,100,1,6,18,0.25,38.38,24,24,5,7,null,1,1,"no","C/C","No",1,83.89,"XP_008193553.2:c.4571A>G","XP_008193553.2:p.Asn1524Ser","LOC658870",658870,null,"658870 [Gene Symbol: LOC658870] [Locus Tag: TcasGA2_TC013423] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC658870] [Gene Type: protein-coding]","LOC658870; TcasGA2_TC013423"]
[559,"NC_007420.3",9903769,"SNV","T","C","Homozygous",21,21,100,1,14,9,0.39,37.81,23,23,10,12,null,1,1,"no","C/C","No",1,83.89,"NP_001139461.1:c.[58+83A>G]; XP_008193524.2:c.[74A>G]","XP_008193524.2:p.Gln25Arg","sPLA2C",659784,"phospholipase A2C","659784 [Gene Symbol: sPLA2C] [Locus Tag: TcasGA2_TC013419] [Chromosome: LG5] [Map Location: ] [Description: phospholipase A2C] [Gene Type: protein-coding]","sPLA2C; TcasGA2_TC013419"]
[560,"NC_007420.3",9952563,"SNV","A","G","Homozygous",20,20,100,1,10,13,0.43,37.7,23,23,8,9,null,1,1,"no","G/G","No",1,80.87,"XP_015835853.1:c.[3043A>G]; XP_971632.1:c.[3043A>G]; XP_015835854.1:c.[3043A>G]; XP_015835852.1:c.[3043A>G]","XP_015835853.1:p.[Arg1015Gly]; XP_971632.1:p.[Arg1015Gly]; XP_015835854.1:p.[Arg1015Gly]; XP_015835852.1:p.[Arg1015Gly]","LOC660296",660296,null,"660296 [Gene Symbol: LOC660296] [Locus Tag: TcasGA2_TC014379] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660296; TcasGA2_TC014379"]
[561,"NC_007420.3",9964175,"SNV","G","C","Homozygous",32,34,94.12,1,18,17,0.49,38.56,35,37,14,18,null,1,1,"no","C/C","No",1,57.26,"XP_008193591.1:c.370G>C","XP_008193591.1:p.Asp124His","LOC103313070",103313070,null,"103313070 [Gene Symbol: LOC103313070] [Locus Tag: TcasGA2_TC014382] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","TcasGA2_TC014382; LOC103313070"]
[562,"NC_007420.3",9964177,"SNV","T","A","Homozygous",31,33,93.94,1,17,16,0.48,38.32,33,35,13,17,null,1,1,"no","A/A","No",1,55.71,"XP_008193591.1:c.372T>A","XP_008193591.1:p.Asp124Glu","LOC103313070",103313070,null,"103313070 [Gene Symbol: LOC103313070] [Locus Tag: TcasGA2_TC014382] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","TcasGA2_TC014382; LOC103313070"]
[563,"NC_007420.3",9969978,"SNV","C","A","Heterozygous",5,21,23.81,0.96,5,0,0,37,5,23,1,5,1.2,0.05,0.45,"no","A/C","No",1,13.75,"XP_971802.2:c.1916C>A","XP_971802.2:p.Ala639Glu","LOC660481",660481,null,"660481 [Gene Symbol: LOC660481] [Locus Tag: TcasGA2_TC014383] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC660481; TcasGA2_TC014383"]
[564,"NC_007420.3",9976166,"SNV","G","C","Homozygous",28,31,90.32,1,18,13,0.42,38.57,31,34,16,19,null,0.97,1,"no","C/C","No",1,34.87,"XP_015836126.1:c.[3092G>C]; XP_015836125.1:c.[3092G>C]","XP_015836126.1:p.[Arg1031Pro]; XP_015836125.1:p.[Arg1031Pro]","LOC660599",660599,null,"660599 [Gene Symbol: LOC660599] [Locus Tag: TcasGA2_TC014384] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660599; TcasGA2_TC014384"]
[565,"NC_007420.3",9991581,"SNV","C","G","Homozygous",22,26,84.62,0.86,10,12,0.45,36.86,22,27,11,13,null,0.98,0.99,"no","G/G","No",1,8.55,"XP_015835868.1:c.[487C>G]; XP_972071.1:c.[487C>G]; XP_015835867.1:c.[487C>G]","XP_015835868.1:p.[Leu163Val]; XP_972071.1:p.[Leu163Val]; XP_015835867.1:p.[Leu163Val]","LOC660772",660772,null,"660772 [Gene Symbol: LOC660772] [Locus Tag: TcasGA2_TC014388] [Chromosome: LG5] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC660772; TcasGA2_TC014388"]
[566,"NC_007420.3",9998778,"SNV","T","C","Homozygous",24,24,100,1,16,11,0.41,37.83,27,27,7,10,null,1,1,"no","C/C","No",1,92.92,"XP_008193575.1:c.[1595T>C]; XP_015835865.1:c.[1595T>C]","XP_008193575.1:p.[Leu532Ser]; XP_015835865.1:p.[Leu532Ser]","LOC103313062",103313062,null,"103313062 [Gene Symbol: LOC103313062] [Locus Tag: TcasGA2_TC014390] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313062] [Gene Type: protein-coding]","TcasGA2_TC014390; P149; LOC103313062"]
[567,"NC_007420.3",9998801,"SNV","G","A","Heterozygous",15,24,62.5,1,7,8,0.47,37,15,27,4,7,0.03,0.63,1,"no","A/G","No",1,62.5,"XP_008193575.1:c.[1618G>A]; XP_015835865.1:c.[1618G>A]","XP_008193575.1:p.[Val540Ile]; XP_015835865.1:p.[Val540Ile]","LOC103313062",103313062,null,"103313062 [Gene Symbol: LOC103313062] [Locus Tag: TcasGA2_TC014390] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313062] [Gene Type: protein-coding]","TcasGA2_TC014390; P149; LOC103313062"]
[568,"NC_007420.3",10020751,"SNV","C","T","Heterozygous",10,22,45.45,1,0,10,0,35.4,10,27,2,6,1.75,0.1,0.22,"no","C/T","No",1,79.19,"XP_015836128.1:c.1580C>T","XP_015836128.1:p.Ala527Val","LOC661374",661374,null,"661374 [Gene Symbol: LOC661374] [Locus Tag: TcasGA2_TC014394] [Chromosome: LG5] [Map Location: ] [Description: fibrous sheath CABYR-binding protein] [Gene Type: protein-coding]","TcasGA2_TC014394; LOC661374"]
[569,"NC_007420.3",10020771,"SNV","C","T","Heterozygous",7,21,33.33,1,0,7,0,37.57,7,23,1,4,0.56,0.29,0.41,"no","C/T","No",1,43.74,"XP_015836128.1:c.1600C>T","XP_015836128.1:p.Pro534Ser","LOC661374",661374,null,"661374 [Gene Symbol: LOC661374] [Locus Tag: TcasGA2_TC014394] [Chromosome: LG5] [Map Location: ] [Description: fibrous sheath CABYR-binding protein] [Gene Type: protein-coding]","TcasGA2_TC014394; LOC661374"]
[570,"NC_007420.3",10020814,"SNV","C","T","Homozygous",21,21,100,1,5,16,0.24,38.1,21,21,7,8,null,1,1,"no","T/T","No",1,85.52,"XP_015836128.1:c.1643C>T","XP_015836128.1:p.Ser548Leu","LOC661374",661374,null,"661374 [Gene Symbol: LOC661374] [Locus Tag: TcasGA2_TC014394] [Chromosome: LG5] [Map Location: ] [Description: fibrous sheath CABYR-binding protein] [Gene Type: protein-coding]","TcasGA2_TC014394; LOC661374"]
[571,"NC_007420.3",10038511,"SNV","A","G","Homozygous",19,22,86.36,0.91,12,9,0.43,38.32,21,24,10,13,null,0.99,1,"no","G/G","No",1,10.55,"XP_008193579.1:c.4535T>C","XP_008193579.1:p.Val1512Ala","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[572,"NC_007420.3",10039006,"SNV","T","C","Homozygous",20,20,100,1,14,9,0.39,38.65,23,23,11,14,null,1,1,"no","C/C","No",1,80.88,"XP_008193579.1:c.4096A>G","XP_008193579.1:p.Lys1366Glu","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[573,"NC_007420.3",10039481,"SNV","G","T","Homozygous",21,21,100,1,16,6,0.27,37.19,22,22,9,15,null,1,1,"no","T/T","No",1,85.52,"XP_008193579.1:c.3664C>A","XP_008193579.1:p.Pro1222Thr","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[574,"NC_007420.3",10039630,"SNV","C","T","Heterozygous",14,21,66.67,1,6,11,0.35,37.07,17,24,7,10,1.38,0.61,0.68,"no","C/T","No",1,45.39,"XP_008193579.1:c.3515G>A","XP_008193579.1:p.Gly1172Glu","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[575,"NC_007420.3",10039640,"SNV","C","T","Heterozygous",11,20,55,1,6,7,0.46,36.27,13,22,8,7,-0.72,0.34,0.6,"no","C/T","No",1,76.14,"XP_008193579.1:c.3505G>A","XP_008193579.1:p.Ala1169Thr","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[576,"NC_007420.3",10039955,"SNV","G","A","Heterozygous",5,22,22.73,0.97,1,5,0.17,40,6,27,1,2,1.1,0.14,0.4,"no","A/G","No",1,15.58,"XP_008193579.1:c.3190C>T","XP_008193579.1:p.Arg1064*","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[577,"NC_007420.3",10040704,"SNV","C","A","Homozygous",22,22,100,1,7,19,0.27,39.23,26,26,10,13,null,1,1,"no","A/A","No",1,88.51,"XP_008193579.1:c.2500G>T","XP_008193579.1:p.Val834Phe","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[578,"NC_007420.3",10040956,"SNV","G","A","Homozygous",22,26,84.62,0.83,10,13,0.43,37.09,23,27,8,16,null,0.49,0.97,"no","A/A","No",1,7.72,"XP_008193579.1:c.2296C>T","XP_008193579.1:p.Pro766Ser","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[579,"NC_007420.3",10042140,"SNV","C","A","Homozygous",24,24,100,1,6,19,0.24,37.96,25,25,10,16,null,1,1,"no","A/A","No",1,94.52,"XP_008193579.1:c.1211G>T","XP_008193579.1:p.Cys404Phe","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[580,"NC_007420.3",10042243,"SNV","C","T","Homozygous",21,21,100,1,6,20,0.23,38.62,26,26,7,12,null,1,1,"no","T/T","No",1,85.53,"XP_008193579.1:c.1108G>A","XP_008193579.1:p.Val370Met","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[581,"NC_007420.3",10076409,"SNV","G","A","Heterozygous",5,21,23.81,0.99,2,5,0.29,35.4,7,26,3,5,-0.83,0.61,0.9,"no","A/G","No",1,18.31,"XP_015836067.1:c.4159C>T","XP_015836067.1:p.His1387Tyr","LOC661884",661884,null,"661884 [Gene Symbol: LOC661884] [Locus Tag: TcasGA2_TC013400] [Chromosome: LG5] [Map Location: ] [Description: cilia- and flagella-associated protein 47] [Gene Type: protein-coding]","TcasGA2_TC013400; LOC661884"]
[582,"NC_007420.3",10076708,"SNV","T","G","Homozygous",18,20,90,0.99,14,11,0.44,34.72,25,28,6,9,null,0.95,1,"no","G/G","No",1,22.69,"XP_015836067.1:c.3860A>C","XP_015836067.1:p.Asn1287Thr","LOC661884",661884,null,"661884 [Gene Symbol: LOC661884] [Locus Tag: TcasGA2_TC013400] [Chromosome: LG5] [Map Location: ] [Description: cilia- and flagella-associated protein 47] [Gene Type: protein-coding]","TcasGA2_TC013400; LOC661884"]
[583,"NC_007420.3",10237459,"SNV","A","T","Heterozygous",8,20,40,1,8,0,0,36.5,8,20,1,8,0.62,0.06,0.71,"no","A/T","No",1,59.38,"XP_008193853.1:c.977A>T","XP_008193853.1:p.Asn326Ile","LOC663071",663071,null,"663071 [Gene Symbol: LOC663071] [Locus Tag: TcasGA2_TC014417] [Chromosome: LG5] [Map Location: ] [Description: neuralized-like protein 4] [Gene Type: protein-coding]","blue; bluestreak; LOC663071; TcasGA2_TC014417"]
[584,"NC_007420.3",10239213,"SNV","C","G","Heterozygous",6,25,24,0.99,6,0,0,38.67,6,25,2,5,2.1,0.03,0.05,"no","C/G","No",1,20.22,"XP_008193853.1:c.2582C>G","XP_008193853.1:p.Thr861Ser","LOC663071",663071,null,"663071 [Gene Symbol: LOC663071] [Locus Tag: TcasGA2_TC014417] [Chromosome: LG5] [Map Location: ] [Description: neuralized-like protein 4] [Gene Type: protein-coding]","blue; bluestreak; LOC663071; TcasGA2_TC014417"]
[585,"NC_007420.3",10244034,"SNV","T","C","Homozygous",26,26,100,1,15,15,0.5,36.54,30,30,11,21,null,1,1,"no","C/C","No",1,98.94,"XP_974278.2:c.983A>G","XP_974278.2:p.Lys328Arg","LOC663124",663124,null,"663124 [Gene Symbol: LOC663124] [Locus Tag: TcasGA2_TC013381] [Chromosome: LG5] [Map Location: ] [Description: EF-hand domain-containing family member C2] [Gene Type: protein-coding]","LOC663124; TcasGA2_TC013381"]
[586,"NC_007420.3","10250740..10250741","MNV","CG","TA","Heterozygous",6,26,23.08,1,3,3,0.5,35.49,6,26,3,5,null,0.09,0.9,"no","complex","No",1,200,"XP_008193854.1:c.852_853delCGinsTA","XP_008193854.1:p.Val285Ile","LOC663179",663179,null,"663179 [Gene Symbol: LOC663179] [Locus Tag: TcasGA2_TC014420] [Chromosome: LG5] [Map Location: ] [Description: extended synaptotagmin-like protein 2b] [Gene Type: protein-coding]","TcasGA2_TC014420; LOC663179; Esyt2b"]
[587,"NC_007420.3",10256280,"SNV","G","C","Homozygous",21,21,100,1,18,7,0.28,37.81,25,25,6,14,null,1,1,"no","C/C","No",1,83.88,"XP_008193857.1:c.[2222G>C]; XP_015835814.1:c.[2222G>C]; XP_015835815.1:c.[2222G>C]","XP_008193857.1:p.[Arg741Pro]; XP_015835814.1:p.[Arg741Pro]; XP_015835815.1:p.[Arg741Pro]","LOC663203",663203,null,"663203 [Gene Symbol: LOC663203] [Locus Tag: TcasGA2_TC014421] [Chromosome: LG5] [Map Location: ] [Description: extended synaptotagmin-like protein 2c] [Gene Type: protein-coding]","LOC663203; Esyt2c; GLEAN_14421; TcasGA2_TC014421"]
[588,"NC_007420.3",10308779,"SNV","C","T","Heterozygous",18,23,78.26,0.96,9,12,0.43,36.56,21,26,5,11,-0.82,0.99,0.97,"no","C/T","No",1,14.43,"XP_008193879.1:c.971C>T","XP_008193879.1:p.Ala324Val","LOC100142081",100142081,null,"100142081 [Gene Symbol: LOC100142081] [Locus Tag: TcasGA2_TC014427] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC014427; LOC100142081"]
[589,"NC_007420.3",10413290,"SNV","C","T","Homozygous",23,23,100,1,10,15,0.4,37,25,25,13,18,null,1,1,"no","T/T","No",1,91.55,"XP_974629.1:c.844C>T","XP_974629.1:p.Arg282Trp","LOC663495",663495,null,"663495 [Gene Symbol: LOC663495] [Locus Tag: TcasGA2_TC014435] [Chromosome: LG5] [Map Location: ] [Description: alpha-methylacyl-CoA racemase] [Gene Type: protein-coding]","LOC663495; TcasGA2_TC014435"]
[590,"NC_007420.3",10432794,"SNV","C","A","Heterozygous",5,21,23.81,0.96,5,0,0,39.6,5,27,2,4,1.16,0.05,0.34,"no","A/C","No",1,13.75,"XP_015835801.1:c.[3866C>A]; XP_015835798.1:c.[3866C>A]; XP_015835800.1:c.[3866C>A]; XP_015835799.1:c.[3866C>A]; XP_015835797.1:c.[3866C>A]","XP_015835801.1:p.[Thr1289Asn]; XP_015835798.1:p.[Thr1289Asn]; XP_015835800.1:p.[Thr1289Asn]; XP_015835799.1:p.[Thr1289Asn]; XP_015835797.1:p.[Thr1289Asn]","LOC663619",663619,null,"663619 [Gene Symbol: LOC663619] [Locus Tag: TcasGA2_TC014438] [Chromosome: LG5] [Map Location: ] [Description: nucleoprotein TPR] [Gene Type: protein-coding]","LOC663619; TcasGA2_TC014438"]
[591,"NC_007420.3",10455601,"SNV","T","C","Heterozygous",14,20,70,1,11,3,0.21,38.07,14,22,3,8,-1.11,0.33,0.98,"no","C/T","No",1,33.77,"XP_976459.1:c.394A>G","XP_976459.1:p.Ile132Val","LOC663636",663636,null,"663636 [Gene Symbol: LOC663636] [Locus Tag: TcasGA2_TC013366] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663636] [Gene Type: protein-coding]","LOC663636; TcasGA2_TC013366"]
[592,"NC_007420.3",10599892,"SNV","A","G","Homozygous",21,21,100,1,15,15,0.5,38.05,30,30,11,10,null,1,1,"no","G/G","No",1,83.89,"XP_015835807.1:c.[1100A>G]; XP_001816010.2:c.[2216A>G]","XP_015835807.1:p.[His367Arg]; XP_001816010.2:p.[His739Arg]","LOC663788",663788,null,"663788 [Gene Symbol: LOC663788] [Locus Tag: TcasGA2_TC014455] [Chromosome: LG5] [Map Location: ] [Description: ubiquitin carboxyl-terminal hydrolase CYLD] [Gene Type: protein-coding]","LOC663788; TcasGA2_TC014455"]
[593,"NC_007420.3",10601234,"SNV","A","C","Homozygous",31,31,100,1,24,13,0.35,38.16,37,37,14,14,null,1,1,"no","C/C","No",1,113.99,"XP_974927.1:c.483T>G","XP_974927.1:p.His161Gln","LOC663799",663799,null,"663799 [Gene Symbol: LOC663799] [Locus Tag: TcasGA2_TC013356] [Chromosome: LG5] [Map Location: ] [Description: probable Golgi SNAP receptor complex member 2] [Gene Type: protein-coding]","LOC663799; TcasGA2_TC013356"]
[594,"NC_007420.3",10601705,"SNV","T","A","Homozygous",21,21,100,1,11,10,0.48,38.48,21,21,9,14,null,1,1,"no","A/A","No",1,85.5,"XP_974927.1:c.59A>T","XP_974927.1:p.Gln20Leu","LOC663799",663799,null,"663799 [Gene Symbol: LOC663799] [Locus Tag: TcasGA2_TC013356] [Chromosome: LG5] [Map Location: ] [Description: probable Golgi SNAP receptor complex member 2] [Gene Type: protein-coding]","LOC663799; TcasGA2_TC013356"]
[595,"NC_007420.3",10608416,"SNV","A","T","Homozygous",32,32,100,1,17,18,0.49,39.5,35,35,11,21,null,1,1,"no","T/T","No",1,118.62,"XP_015835806.1:c.1550T>A","XP_015835806.1:p.Ile517Lys","LOC663878",663878,null,"663878 [Gene Symbol: LOC663878] [Locus Tag: TcasGA2_TC013351] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663878] [Gene Type: protein-coding]","LOC663878; TcasGA2_TC013351"]
[596,"NC_007420.3",10608445,"SNV","G","C","Homozygous",31,31,100,1,21,14,0.4,37.13,35,35,13,20,null,1,1,"no","C/C","No",1,113.98,"XP_015835806.1:c.1521C>G","XP_015835806.1:p.Asp507Glu","LOC663878",663878,null,"663878 [Gene Symbol: LOC663878] [Locus Tag: TcasGA2_TC013351] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663878] [Gene Type: protein-coding]","LOC663878; TcasGA2_TC013351"]
[597,"NC_007420.3",10651564,"SNV","G","A","Heterozygous",6,22,27.27,1,0,6,0,38.83,6,24,3,3,0.44,0.3,0.64,"no","A/G","No",1,28.23,"XP_015835843.1:c.[184G>A]; XP_015835806.1:c.[1110+16381C>T]","XP_015835843.1:p.Glu62Lys","LOC663878, LOC103313155, LOC107397981","663878 , 103313155 , 107397981",null,"663878 [Gene Symbol: LOC663878] [Locus Tag: TcasGA2_TC013351] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663878] [Gene Type: protein-coding] || 103313155 [Gene Symbol: LOC103313155] [Locus Tag: TcasGA2_TC014463] [Chromosome: LG5] [Map Location: ] [Description: tetraspanin-1] [Gene Type: protein-coding] || 107397981 [Gene Symbol: LOC107397981] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: histidine-rich glycoprotein-like] [Gene Type: protein-coding]","LOC663878; TcasGA2_TC013351 || TcasGA2_TC014463; LOC103313155 || CP30; LOC107397981"]
[598,"NC_007420.3",10671180,"SNV","G","C","Homozygous",20,20,100,1,14,7,0.33,37.4,21,21,12,16,null,1,1,"no","C/C","No",1,80.88,"XP_015835806.1:c.918C>G","XP_015835806.1:p.Asp306Glu","LOC663878",663878,null,"663878 [Gene Symbol: LOC663878] [Locus Tag: TcasGA2_TC013351] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663878] [Gene Type: protein-coding]","LOC663878; TcasGA2_TC013351"]
[599,"NC_007420.3",10674407,"SNV","T","C","Homozygous",21,21,100,1,8,14,0.36,38.9,22,22,10,11,null,1,1,"no","C/C","No",1,83.89,"XP_008193897.1:c.619A>G","XP_008193897.1:p.Ile207Val","LOC103313157",103313157,null,"103313157 [Gene Symbol: LOC103313157] [Locus Tag: TcasGA2_TC013350] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein DZIP1L] [Gene Type: protein-coding]","TcasGA2_TC013350; LOC103313157"]
[600,"NC_007420.3","10674412..10674413","MNV","GA","AC","Homozygous",22,27,81.48,1,9,14,0.39,37.88,23,28,12,12,1.86,0.76,0.91,"no","AC/AC","No",1,200,"XP_008193897.1:c.613_614delTCinsGT","XP_008193897.1:p.Ser205Val","LOC103313157",103313157,null,"103313157 [Gene Symbol: LOC103313157] [Locus Tag: TcasGA2_TC013350] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein DZIP1L] [Gene Type: protein-coding]","TcasGA2_TC013350; LOC103313157"]
[601,"NC_007420.3",10685335,"SNV","C","T","Homozygous",21,22,95.45,1,16,8,0.33,33.9,24,25,11,11,null,1,1,"no","T/T","No",1,55.43,"XP_975040.2:c.133G>A","XP_975040.2:p.Ala45Thr","LOC663918",663918,null,"663918 [Gene Symbol: LOC663918] [Locus Tag: TcasGA2_TC013349] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663918] [Gene Type: protein-coding]","LOC663918; TcasGA2_TC013349"]
[602,"NC_007420.3",10692567,"SNV","G","A","Heterozygous",13,25,52,1,9,10,0.47,37.54,19,31,6,9,-0.52,0.14,0.55,"no","A/G","No",1,97.65,"XP_008193900.1:c.2534C>T","XP_008193900.1:p.Pro845Leu","LOC663972",663972,null,"663972 [Gene Symbol: LOC663972] [Locus Tag: TcasGA2_TC013347] [Chromosome: LG5] [Map Location: ] [Description: DNA repair protein complementing XP-G cells homolog] [Gene Type: protein-coding]","TcasGA2_TC013347; LOC663972"]
[603,"NC_007420.3",10924557,"SNV","C","A","Heterozygous",5,20,25,0.98,0,5,0,39.2,5,22,1,1,0.04,0.15,0.29,"no","A/C","No",1,16.44,"XP_967337.1:c.766G>T","XP_967337.1:p.Gly256Cys","LOC655683",655683,null,"655683 [Gene Symbol: LOC655683] [Locus Tag: TcasGA2_TC013336] [Chromosome: LG5] [Map Location: ] [Description: ultraviolet-B receptor UVR8] [Gene Type: protein-coding]","LOC655683; TcasGA2_TC013336"]
[604,"NC_007420.3",11149126,"SNV","C","A","Heterozygous",8,25,32,1,0,8,0,40.12,8,25,1,1,2.07,0.09,0.48,"no","A/C","No",1,40.67,"XP_008193922.1:c.[1151C>A]; XP_008193921.1:c.[1181C>A]; XP_968824.2:c.[1202C>A]","XP_008193922.1:p.[Pro384His]; XP_008193921.1:p.[Pro394His]; XP_968824.2:p.[Pro401His]","LOC657263",657263,null,"657263 [Gene Symbol: LOC657263] [Locus Tag: TcasGA2_TC014488] [Chromosome: LG5] [Map Location: ] [Description: sodium/potassium/calcium exchanger 3] [Gene Type: protein-coding]","LOC657263; TcasGA2_TC014488"]
[605,"NC_007420.3",11184365,"SNV","A","G","Homozygous",20,20,100,1,2,18,0.1,36.85,20,20,10,13,null,1,1,"no","G/G","No",1,80.88,"XP_008193949.1:c.[3580A>G]; XP_015835757.1:c.[3580A>G]; XP_015835756.1:c.[3580A>G]","XP_008193949.1:p.[Ile1194Val]; XP_015835757.1:p.[Ile1194Val]; XP_015835756.1:p.[Ile1194Val]","LOC103313173",103313173,null,"103313173 [Gene Symbol: LOC103313173] [Locus Tag: TcasGA2_TC014491] [Chromosome: LG5] [Map Location: ] [Description: LRR receptor-like serine/threonine-protein kinase GSO2] [Gene Type: protein-coding]","LOC103313173; TcasGA2_TC014491"]
[606,"NC_007420.3",11204847,"SNV","A","G","Homozygous",21,21,100,1,16,8,0.33,37.67,24,24,9,15,null,1,1,"no","G/G","No",1,83.88,"XP_008193933.1:c.[182T>C]; XP_015835759.1:c.[92T>C]","XP_008193933.1:p.[Leu61Ser]; XP_015835759.1:p.[Leu31Ser]","LOC658283",658283,null,"658283 [Gene Symbol: LOC658283] [Locus Tag: TcasGA2_TC013311] [Chromosome: LG5] [Map Location: ] [Description: choline-phosphate cytidylyltransferase A] [Gene Type: protein-coding]","LOC658283; TcasGA2_TC013311"]
[607,"NC_007420.3",11205470,"SNV","C","T","Homozygous",17,21,80.95,0.84,9,9,0.5,37.65,18,22,8,10,-1.48,0.93,0.97,"no","C/T","No",1,7.84,"XP_008193933.1:c.[112-553G>A]; XP_969778.3:c.[758G>A]","XP_969778.3:p.Arg253Lys","LOC658283",658283,null,"658283 [Gene Symbol: LOC658283] [Locus Tag: TcasGA2_TC013311] [Chromosome: LG5] [Map Location: ] [Description: choline-phosphate cytidylyltransferase A] [Gene Type: protein-coding]","LOC658283; TcasGA2_TC013311"]
[608,"NC_007420.3",11286195,"SNV","G","A","Homozygous",27,27,100,1,14,13,0.48,35.93,27,27,8,13,null,1,1,"no","A/A","No",1,103.55,"XP_015836057.1:c.[923C>T]; XP_008193942.1:c.[923C>T]; XP_008193941.1:c.[923C>T]","XP_015836057.1:p.[Ala308Val]; XP_008193942.1:p.[Ala308Val]; XP_008193941.1:p.[Ala308Val]","LOC659462",659462,null,"659462 [Gene Symbol: LOC659462] [Locus Tag: TcasGA2_TC013303] [Chromosome: LG5] [Map Location: ] [Description: neural Wiskott-Aldrich syndrome protein] [Gene Type: protein-coding]","LOC659462; TcasGA2_TC013303"]
[609,"NC_007420.3","11309219^11309220","Insertion","-","TTT","Heterozygous",12,23,52.17,1,7,12,0.37,37.78,19,30,9,10,3.37,0.61,0.77,"no","complex","Yes",3,200,"XP_015836105.1:c.[252_253insTTT]; XP_015836102.1:c.[252_253insTTT]; XP_015836107.1:c.[252_253insTTT]; XP_015836103.1:c.[252_253insTTT]; XP_015836106.1:c.[252_253insTTT]; XP_015836104.1:c.[252_253insTTT]","XP_015836105.1:p.[Phe85_Pro86insPhe]; XP_015836102.1:p.[Phe85_Pro86insPhe]; XP_015836107.1:p.[Phe85_Pro86insPhe]; XP_015836103.1:p.[Phe85_Pro86insPhe]; XP_015836106.1:p.[Phe85_Pro86insPhe]; XP_015836104.1:p.[Phe85_Pro86insPhe]","LOC107398017",107398017,null,"107398017 [Gene Symbol: LOC107398017] [Locus Tag: TcasGA2_TC014504] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC107398017; TcasGA2_TC014504"]
[610,"NC_007420.3",11363627,"SNV","A","G","Homozygous",23,23,100,1,5,23,0.18,36,28,28,7,11,null,1,1,"no","G/G","No",1,89.91,"XP_966730.2:c.41A>G","XP_966730.2:p.Asp14Gly","LOC655128",655128,null,"655128 [Gene Symbol: LOC655128] [Locus Tag: TcasGA2_TC014541] [Chromosome: LG5] [Map Location: ] [Description: cysteine and histidine-rich protein 1] [Gene Type: protein-coding]","TcasGA2_TC014541; LOC655128"]
[611,"NC_007420.3",11478917,"SNV","C","T","Homozygous",22,24,91.67,1,14,8,0.36,37.5,22,24,10,8,null,0.93,1,"no","T/T","No",1,29.62,"XP_015836055.1:c.1462G>A","XP_015836055.1:p.Gly488Ser","LOC655244",655244,null,"655244 [Gene Symbol: LOC655244] [Locus Tag: TcasGA2_TC033183] [Chromosome: LG5] [Map Location: ] [Description: ATPase family AAA domain-containing protein 2-like] [Gene Type: protein-coding]","LOC655244; TcasGA2_TC033183"]
[612,"NC_007420.3","11494057..11494058","MNV","TA","AT","Homozygous",22,22,100,1,13,12,0.48,38.12,25,25,9,14,null,1,1,"no","AT/AT","No",1,200,"XP_008193971.1:c.[159+1499_159+1500delTAinsAT]; XP_008193970.1:c.[1213_1214delTAinsAT]","XP_008193970.1:p.Tyr405Ile","LOC103313181, LOC103313180","103313181 , 103313180",null,"103313181 [Gene Symbol: LOC103313181] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: von Willebrand factor A domain-containing protein 9] [Gene Type: protein-coding] || 103313180 [Gene Symbol: LOC103313180] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: dnaJ homolog subfamily C member 2] [Gene Type: protein-coding]","LOC103313181 || LOC103313180"]
[613,"NC_007420.3",11494097,"SNV","G","A","Heterozygous",9,20,45,1,4,7,0.36,37.67,11,24,6,6,-1.67,0.72,0.72,"no","complex","No",1,200,"XP_008193971.1:c.[159+1460C>T]; XP_008193970.1:c.[1174C>T]","XP_008193970.1:p.Pro392Ser","LOC103313181, LOC103313180","103313181 , 103313180",null,"103313181 [Gene Symbol: LOC103313181] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: von Willebrand factor A domain-containing protein 9] [Gene Type: protein-coding] || 103313180 [Gene Symbol: LOC103313180] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: dnaJ homolog subfamily C member 2] [Gene Type: protein-coding]","LOC103313181 || LOC103313180"]
[614,"NC_007420.3",11554504,"SNV","C","A","Heterozygous",7,21,33.33,1,7,0,0,37.29,7,21,2,4,-0.45,0.06,0.22,"no","A/C","No",1,39.12,"XP_008193987.2:c.2308C>A","XP_008193987.2:p.His770Asn","LOC100142251",100142251,null,"100142251 [Gene Symbol: LOC100142251] [Locus Tag: TcasGA2_TC014552] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC100142251] [Gene Type: protein-coding]","LOC100142251; TcasGA2_TC014552"]
[615,"NC_007420.3",11616042,"SNV","T","A","Homozygous",27,27,100,1,21,11,0.34,38.44,32,32,11,15,null,1,1,"no","A/A","No",1,103.55,"XP_008193995.1:c.[347A>T]; XP_008193996.1:c.[706-1843A>T]; XP_008193997.1:c.[706-1843A>T]","XP_008193995.1:p.Asn116Ile","LOC103313188, LOC655605","103313188 , 655605",null,"103313188 [Gene Symbol: LOC103313188] [Locus Tag: TcasGA2_TC013242] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313188] [Gene Type: protein-coding] || 655605 [Gene Symbol: LOC655605] [Locus Tag: TcasGA2_TC013243] [Chromosome: LG5] [Map Location: ] [Description: protein D2] [Gene Type: protein-coding]","TcasGA2_TC013242; LOC103313188 || TcasGA2_TC013243; LOC655605"]
[616,"NC_007420.3",11911486,"SNV","T","C","Heterozygous",13,34,38.24,1,5,12,0.29,36.69,17,38,6,7,-2.41,0.09,0.55,"no","C/T","No",1,85.78,"XP_008194015.1:c.779T>C","XP_008194015.1:p.Met260Thr","LOC103313192",103313192,null,"103313192 [Gene Symbol: LOC103313192] [Locus Tag: TcasGA2_TC014573] [Chromosome: LG5] [Map Location: ] [Description: cGMP-dependent protein kinase, isozyme 1] [Gene Type: protein-coding]","TcasGA2_TC014573; LOC103313192"]
[617,"NC_007420.3",12131016,"SNV","T","G","Homozygous",24,24,100,1,7,17,0.29,37.38,24,24,7,15,null,1,1,"no","G/G","No",1,92.92,"XP_008194030.2:c.1996A>C","XP_008194030.2:p.Lys666Gln","LOC100141837",100141837,null,"100141837 [Gene Symbol: LOC100141837] [Locus Tag: TcasGA2_TC013215] [Chromosome: LG5] [Map Location: ] [Description: neprilysin-2] [Gene Type: protein-coding]","TcasGA2_TC013215; LOC100141837"]
[618,"NC_007420.3",12131036,"SNV","C","T","Homozygous",20,20,100,1,9,11,0.45,36.35,20,20,8,13,null,1,1,"no","T/T","No",1,82.52,"XP_008194030.2:c.1976G>A","XP_008194030.2:p.Ser659Asn","LOC100141837",100141837,null,"100141837 [Gene Symbol: LOC100141837] [Locus Tag: TcasGA2_TC013215] [Chromosome: LG5] [Map Location: ] [Description: neprilysin-2] [Gene Type: protein-coding]","TcasGA2_TC013215; LOC100141837"]
[619,"NC_007420.3",12145681,"SNV","G","T","Heterozygous",7,26,26.92,1,7,0,0,38.43,7,29,4,2,2.34,0.04,0.1,"no","G/T","No",1,24.99,"XP_015835858.1:c.[1558G>T]; XP_008194033.2:c.[1558G>T]; XP_015835859.1:c.[1132G>T]","XP_015835858.1:p.[Ala520Ser]; XP_008194033.2:p.[Ala520Ser]; XP_015835859.1:p.[Ala378Ser]","LOC658871",658871,null,"658871 [Gene Symbol: LOC658871] [Locus Tag: ] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC658871"]
[620,"NC_007420.3",12339781,"SNV","C","T","Heterozygous",8,22,36.36,1,0,8,0,37.12,8,27,2,5,1.23,0.07,0.36,"no","C/T","No",1,53.72,"XP_008194232.2:c.1243G>A","XP_008194232.2:p.Ala415Thr","LOC656518",656518,null,"656518 [Gene Symbol: LOC656518] [Locus Tag: TcasGA2_TC013204] [Chromosome: LG5] [Map Location: ] [Description: cleavage stimulation factor subunit 1] [Gene Type: protein-coding]","TcasGA2_TC013204; LOC656518"]
[621,"NC_007420.3",12339799,"SNV","G","C","Heterozygous",8,24,33.33,1,0,8,0,38.88,8,25,2,5,3,0.01,0.76,"no","C/G","No",1,48.79,"XP_008194232.2:c.1225C>G","XP_008194232.2:p.His409Asp","LOC656518",656518,null,"656518 [Gene Symbol: LOC656518] [Locus Tag: TcasGA2_TC013204] [Chromosome: LG5] [Map Location: ] [Description: cleavage stimulation factor subunit 1] [Gene Type: protein-coding]","TcasGA2_TC013204; LOC656518"]
[622,"NC_007420.3",12447401,"SNV","A","C","Homozygous",26,27,96.3,1,5,23,0.18,36.77,28,29,10,15,null,1,1,"no","C/C","No",1,69.86,"XP_015836042.1:c.49T>G","XP_015836042.1:p.Ser17Ala","LOC657495",657495,null,"657495 [Gene Symbol: LOC657495] [Locus Tag: TcasGA2_TC013196] [Chromosome: LG5] [Map Location: ] [Description: insulin-like growth factor-binding protein complex acid labile subunit] [Gene Type: protein-coding]","LOC657495; TcasGA2_TC013196"]
[623,"NC_007420.3",12646676,"SNV","G","T","Heterozygous",9,20,45,1,9,0,0,37,9,22,4,8,-0.87,0.28,0.17,"no","G/T","No",1,67.22,"XP_008194273.1:c.294G>T","XP_008194273.1:p.Gln98His","LOC659724",659724,null,"659724 [Gene Symbol: LOC659724] [Locus Tag: TcasGA2_TC014633] [Chromosome: LG5] [Map Location: ] [Description: WD repeat-containing protein 59] [Gene Type: protein-coding]","LOC659724; TcasGA2_TC014633"]
[624,"NC_007420.3","12670964^12670965","Insertion","-","ATT","Heterozygous",21,33,63.64,1,15,9,0.38,36.59,24,41,14,12,1.32,0.68,1,"no","complex","No",1,200,"XP_008194275.1:c.[2_3insAAT]; XP_971217.2:c.[2_3insAAT]","XP_008194275.1:p.[gap0_Met1insIle]; XP_971217.2:p.[gap0_Met1insIle]","LOC659857, LOC100142293","659857 , 100142293",null,"659857 [Gene Symbol: LOC659857] [Locus Tag: TcasGA2_TC030762] [Chromosome: LG5] [Map Location: ] [Description: histone H4 transcription factor] [Gene Type: protein-coding] || 100142293 [Gene Symbol: LOC100142293] [Locus Tag: TcasGA2_TC030653] [Chromosome: LG5] [Map Location: ] [Description: mitotic spindle assembly checkpoint protein MAD2B] [Gene Type: protein-coding]","LOC659857; TcasGA2_TC030762 || LOC100142293; TcasGA2_TC030653"]
[625,"NC_007420.3","12671048^12671049","Insertion","-","T","Heterozygous",6,28,21.43,0.93,0,6,0,39,6,28,1,1,0,0.16,0.35,"no","-/T","No",1,11.45,"XP_001812267.1:c.[499_500insA]; XP_008194274.1:c.[508_509insA]","XP_001812267.1:p.[Ser167fs]; XP_008194274.1:p.[Ser170fs]","LOC100142293",100142293,null,"100142293 [Gene Symbol: LOC100142293] [Locus Tag: TcasGA2_TC030653] [Chromosome: LG5] [Map Location: ] [Description: mitotic spindle assembly checkpoint protein MAD2B] [Gene Type: protein-coding]","LOC100142293; TcasGA2_TC030653"]
[626,"NC_007420.3",12675559,"SNV","C","A","Heterozygous",5,20,25,0.98,5,0,0,39,5,24,3,4,1.05,0.41,0.54,"no","A/C","No",1,16.45,"XP_015835741.1:c.[271-1G>T]; XP_008194277.1:c.[66G>T]; XP_971342.1:c.[276G>T]","XP_008194277.1:p.[Gln22His]; XP_971342.1:p.[Gln92His]","LOC659985",659985,null,"659985 [Gene Symbol: LOC659985] [Locus Tag: TcasGA2_TC013179] [Chromosome: LG5] [Map Location: ] [Description: MPN domain-containing protein CG4751] [Gene Type: protein-coding]","TcasGA2_TC013179; LOC659985"]
[627,"NC_007420.3",12685471,"SNV","A","G","Homozygous",22,22,100,1,5,20,0.2,36.68,25,25,9,12,null,1,1,"no","G/G","No",1,86.9,"XP_008194279.1:c.304A>G","XP_008194279.1:p.Asn102Asp","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[628,"NC_007420.3",12687493,"SNV","G","C","Homozygous",26,26,100,1,17,12,0.41,38.15,29,29,8,17,null,1,1,"no","C/C","No",1,98.94,"XP_008194279.1:c.2110G>C","XP_008194279.1:p.Ala704Pro","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[629,"NC_007420.3",12688693,"SNV","G","A","Heterozygous",13,25,52,1,1,13,0.07,36.46,14,26,4,5,-0.92,0.07,0.34,"no","A/G","No",1,97.65,"XP_008194279.1:c.3218G>A","XP_008194279.1:p.Ser1073Asn","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[630,"NC_007420.3",12690047,"SNV","A","T","Heterozygous",6,20,30,1,5,6,0.45,40.17,11,25,3,4,2.89,0.04,0.74,"no","A/T","No",1,33.82,"XP_008194279.1:c.4394A>T","XP_008194279.1:p.Tyr1465Phe","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[631,"NC_007420.3",12704459,"SNV","T","C","Heterozygous",17,33,51.52,1,5,12,0.29,35.41,17,35,2,5,-2.16,0.05,0.72,"no","C/T","No",1,124.78,"XP_001812538.1:c.[517A>G]; XP_008194283.1:c.[517A>G]; XP_008194282.1:c.[517A>G]","XP_001812538.1:p.[Asn173Asp]; XP_008194283.1:p.[Asn173Asp]; XP_008194282.1:p.[Asn173Asp]","LOC100142152",100142152,null,"100142152 [Gene Symbol: LOC100142152] [Locus Tag: TcasGA2_TC030773] [Chromosome: LG5] [Map Location: ] [Description: nucleolin 1] [Gene Type: protein-coding]","LOC100142152; TcasGA2_TC030773"]
[632,"NC_007420.3",12709311,"SNV","T","C","Homozygous",29,29,100,1,21,17,0.45,37.83,38,38,12,13,null,1,1,"no","C/C","No",1,107.97,"XP_001812575.1:c.[193A>G]; XP_008194284.1:c.[193A>G]","XP_001812575.1:p.[Asn65Asp]; XP_008194284.1:p.[Asn65Asp]","LOC100141954",100141954,null,"100141954 [Gene Symbol: LOC100141954] [Locus Tag: TcasGA2_TC030661] [Chromosome: LG5] [Map Location: ] [Description: sorting nexin-13] [Gene Type: protein-coding]","LOC100141954; TcasGA2_TC030661"]
[633,"NC_007420.3",12730146,"SNV","A","G","Homozygous",21,21,100,1,13,9,0.41,37.81,22,22,7,15,null,1,1,"no","G/G","No",1,83.88,"XP_008194294.1:c.1435T>C","XP_008194294.1:p.Phe479Leu","LOC103313251",103313251,null,"103313251 [Gene Symbol: LOC103313251] [Locus Tag: TcasGA2_TC013173] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC013173; LOC103313251"]
[634,"NC_007420.3",12739445,"SNV","A","T","Homozygous",27,27,100,1,10,17,0.37,37.44,27,27,9,8,null,1,1,"no","T/T","No",1,100.57,"XP_015836003.1:c.[1538+126T>A]; XP_015836001.1:c.[1332T>A]; XP_015836000.1:c.[1419T>A]; XP_015835999.1:c.[1467T>A]; XP_015836002.1:c.[1586+126T>A]; XP_015836004.1:c.[1451+126T>A]","XP_015836001.1:p.[Asp444Glu]; XP_015836000.1:p.[Asp473Glu]; XP_015835999.1:p.[Asp489Glu]","LOC658986",658986,null,"658986 [Gene Symbol: LOC658986] [Locus Tag: TcasGA2_TC013172] [Chromosome: LG5] [Map Location: ] [Description: PDZ and LIM domain protein Zasp] [Gene Type: protein-coding]","TcasGA2_TC013172; LOC658986"]
[635,"NC_007420.3",12806197,"SNV","C","G","Homozygous",18,20,90,0.98,13,12,0.48,35.89,25,29,11,10,null,0.98,1,"no","G/G","No",1,17.68,"XP_015836065.1:c.[274C>G]; XP_015836066.1:c.[274C>G]; XP_008194193.2:c.[274C>G]","XP_015836065.1:p.[His92Asp]; XP_015836066.1:p.[His92Asp]; XP_008194193.2:p.[His92Asp]","LOC660238",660238,null,"660238 [Gene Symbol: LOC660238] [Locus Tag: TcasGA2_TC014646] [Chromosome: LG5] [Map Location: ] [Description: T-complex-associated testis-expressed protein 1] [Gene Type: protein-coding]","LOC660238; TcasGA2_TC014646"]
[636,"NC_007420.3",12820100,"SNV","A","G","Heterozygous",8,20,40,1,4,4,0.5,38.25,8,23,4,4,0.58,0.43,0.86,"no","A/G","No",1,60.84,"XP_001813222.2:c.1837A>G","XP_001813222.2:p.Met613Val","LOC660483",660483,null,"660483 [Gene Symbol: LOC660483] [Locus Tag: TcasGA2_TC014648] [Chromosome: LG5] [Map Location: ] [Description: peroxisome biogenesis protein 1] [Gene Type: protein-coding]","LOC660483; TcasGA2_TC014648"]
[637,"NC_007420.3",12970850,"Deletion","G","-","Heterozygous",5,22,22.73,0.96,5,0,0,40,5,22,1,1,1.18,0.1,0.74,"no","-/G","No",1,14.4,"XP_015836161.1:c.56delC","XP_015836161.1:p.Ala19fs","LOC660933",660933,null,"660933 [Gene Symbol: LOC660933] [Locus Tag: TcasGA2_TC013160] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC660933] [Gene Type: protein-coding]","TcasGA2_TC013160; LOC660933"]
[638,"NC_007420.3",13159945,"SNV","A","T","Homozygous",22,22,100,1,9,14,0.39,37.91,23,23,9,13,null,1,1,"no","T/T","No",1,88.54,"XP_015835945.1:c.1083A>T","XP_015835945.1:p.Glu361Asp","LOC661594",661594,null,"661594 [Gene Symbol: LOC661594] [Locus Tag: TcasGA2_TC014664] [Chromosome: LG5] [Map Location: ] [Description: CD109 antigen] [Gene Type: protein-coding]","LOC661594; TcasGA2_TC014664"]
[639,"NC_007420.3",13165489,"SNV","G","T","Heterozygous",5,20,25,0.98,0,5,0,37.4,5,22,2,4,0.52,0.07,0.18,"no","G/T","No",1,16.31,"XP_972882.1:c.425C>A","XP_972882.1:p.Ala142Asp","LOC661639",661639,null,"661639 [Gene Symbol: LOC661639] [Locus Tag: TcasGA2_TC013150] [Chromosome: LG5] [Map Location: ] [Description: GPI transamidase component PIG-T] [Gene Type: protein-coding]","TcasGA2_TC013150; LOC661639"]
[640,"NC_007420.3",13179201,"SNV","C","G","Homozygous",24,29,82.76,0.54,19,13,0.41,37.54,32,37,7,10,-0.75,0.94,0.97,"no","G/G","No",1,3.37,"XP_015836172.1:c.[494G>C]; XP_015836170.1:c.[494G>C]; XP_015836171.1:c.[491G>C]; XP_008194202.1:c.[434G>C]; XP_015836173.1:c.[449G>C]","XP_015836172.1:p.[Gly165Ala]; XP_015836170.1:p.[Gly165Ala]; XP_015836171.1:p.[Gly164Ala]; XP_008194202.1:p.[Gly145Ala]; XP_015836173.1:p.[Gly150Ala]","LOC661886",661886,null,"661886 [Gene Symbol: LOC661886] [Locus Tag: TcasGA2_TC030676] [Chromosome: LG5] [Map Location: ] [Description: nuclear receptor subfamily 2 group E member 1] [Gene Type: protein-coding]","LOC661886; TcasGA2_TC030676"]
[641,"NC_007420.3",13363021,"SNV","G","T","Heterozygous",15,26,57.69,1,4,14,0.22,37.2,18,34,8,7,1.84,0.89,0.99,"no","G/T","No",1,83.93,"XP_008194323.1:c.[1620G>T]; XP_008194326.1:c.[1605G>T]; XP_973331.2:c.[1620G>T]; XP_008194324.1:c.[1620G>T]","XP_008194323.1:p.[Leu540Phe]; XP_008194326.1:p.[Leu535Phe]; XP_973331.2:p.[Leu540Phe]; XP_008194324.1:p.[Leu540Phe]","LOC662121",662121,null,"662121 [Gene Symbol: LOC662121] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC662121] [Gene Type: protein-coding]","LOC662121"]
[642,"NC_007420.3",13381419,"SNV","C","A","Heterozygous",6,25,24,0.97,0,6,0,34.83,6,26,2,2,-0.99,0.11,0.16,"no","A/C","No",1,15.35,"XP_973463.1:c.63G>T","XP_973463.1:p.Lys21Asn","LOC662259",662259,null,"662259 [Gene Symbol: LOC662259] [Locus Tag: TcasGA2_TC013142] [Chromosome: LG5] [Map Location: ] [Description: large neutral amino acids transporter small subunit 2] [Gene Type: protein-coding]","TcasGA2_TC013142; LOC662259"]
[643,"NC_007420.3",13383683,"SNV","G","A","Heterozygous",7,21,33.33,1,7,0,0,37.14,7,21,2,5,-0.34,0.13,0.37,"no","A/G","No",1,43.77,"XP_015835907.1:c.[106G>A]; XP_008194331.1:c.[106G>A]","XP_015835907.1:p.[Gly36Ser]; XP_008194331.1:p.[Gly36Ser]","LOC103313264",103313264,null,"103313264 [Gene Symbol: LOC103313264] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313264] [Gene Type: protein-coding]","LOC103313264"]
[644,"NC_007420.3",13383701,"SNV","T","G","Heterozygous",12,23,52.17,1,8,4,0.33,39.58,12,25,4,7,0.52,0.62,1,"no","G/T","No",1,84.38,"XP_015835907.1:c.[124T>G]; XP_008194331.1:c.[124T>G]","XP_015835907.1:p.[Trp42Gly]; XP_008194331.1:p.[Trp42Gly]","LOC103313264",103313264,null,"103313264 [Gene Symbol: LOC103313264] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313264] [Gene Type: protein-coding]","LOC103313264"]
[645,"NC_007420.3",13544110,"SNV","A","T","Heterozygous",14,23,60.87,1,10,4,0.29,36.93,14,23,6,9,-0.06,0.75,0.99,"no","A/T","No",1,63.72,"XP_001814936.2:c.[4568+952A>T]; XP_015835761.1:c.[943T>A]","XP_015835761.1:p.Cys315Ser","LOC100141883, LOC100142094","100141883 , 100142094",null,"100141883 [Gene Symbol: LOC100141883] [Locus Tag: TcasGA2_TC014698] [Chromosome: LG5] [Map Location: ] [Description: multiple epidermal growth factor-like domains protein 8] [Gene Type: protein-coding] || 100142094 [Gene Symbol: LOC100142094] [Locus Tag: TcasGA2_TC013116] [Chromosome: LG5] [Map Location: ] [Description: sperm-associated antigen 1] [Gene Type: protein-coding]","TcasGA2_TC014698; LOC100141883 || TcasGA2_TC013116; LOC100142094"]
[646,"NC_007420.3",13551101,"Replacement","G","AA","Heterozygous",8,24,33.33,1,0,8,0,40.12,8,27,2,3,2.33,0.04,0.43,"no","complex","No",1,200,"XP_974528.1:c.355delGinsAA","XP_974528.1:p.Val119fs","LOC663384",663384,null,"663384 [Gene Symbol: LOC663384] [Locus Tag: TcasGA2_TC014699] [Chromosome: LG5] [Map Location: ] [Description: 5-demethoxyubiquinone hydroxylase, mitochondrial] [Gene Type: protein-coding]","LOC663384; TcasGA2_TC014699"]
[647,"NC_007420.3",13565291,"SNV","G","A","Heterozygous",20,28,71.43,1,13,9,0.41,38.1,22,30,7,15,0.1,0.92,0.96,"no","A/G","No",1,38.6,"XP_008194353.1:c.407C>T","XP_008194353.1:p.Thr136Met","LOC663440",663440,null,"663440 [Gene Symbol: LOC663440] [Locus Tag: TcasGA2_TC013114] [Chromosome: LG5] [Map Location: ] [Description: endothelin-converting enzyme 1] [Gene Type: protein-coding]","TcasGA2_TC013114; LOC663440"]
[648,"NC_007420.3","13566269..13566270","MNV","GT","AC","Heterozygous",13,25,52,1,9,8,0.47,36.83,17,29,7,14,-0.32,0.66,0.87,"no","complex","No",1,200,"XP_015836082.1:c.1954_1955delACinsGT","XP_015836082.1:p.Thr652Val","LOC103313231",103313231,null,"103313231 [Gene Symbol: LOC103313231] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: neprilysin-21-like] [Gene Type: protein-coding]","LOC103313231"]
[649,"NC_007420.3",13654074,"SNV","A","G","Homozygous",21,21,100,1,13,14,0.48,37.1,27,27,8,14,null,1,1,"no","G/G","No",1,83.89,"XP_974681.2:c.[332T>C]; XP_008194361.1:c.[326T>C]; XP_015835689.1:c.[332T>C]","XP_974681.2:p.[Val111Ala]; XP_008194361.1:p.[Val109Ala]; XP_015835689.1:p.[Val111Ala]","LOC663549",663549,null,"663549 [Gene Symbol: LOC663549] [Locus Tag: TcasGA2_TC013108] [Chromosome: LG5] [Map Location: ] [Description: advillin] [Gene Type: protein-coding]","LOC663549; TcasGA2_TC013108"]
[650,"NC_007420.3",13716840,"SNV","G","A","Homozygous",26,26,100,1,12,24,0.33,35.88,36,36,15,11,null,1,1,"no","A/A","No",1,100.54,"XP_015835680.1:c.[9928G>A]; XP_015835679.1:c.[8230G>A]","XP_015835680.1:p.[Asp3310Asn]; XP_015835679.1:p.[Asp2744Asn]","LOC663637",663637,null,"663637 [Gene Symbol: LOC663637] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: dynein heavy chain 7, axonemal] [Gene Type: protein-coding]","LOC663637"]
[651,"NC_007420.3",13717929,"SNV","A","T","Heterozygous",9,24,37.5,1,3,6,0.33,38.22,9,25,3,5,0.42,0.29,0.66,"no","A/T","No",1,60.99,"XP_015835680.1:c.[10872A>T]; XP_015835679.1:c.[9174A>T]","XP_015835680.1:p.[Glu3624Asp]; XP_015835679.1:p.[Glu3058Asp]","LOC663637",663637,null,"663637 [Gene Symbol: LOC663637] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: dynein heavy chain 7, axonemal] [Gene Type: protein-coding]","LOC663637"]
[652,"NC_007420.3",14005800,"SNV","A","C","Homozygous",29,29,100,1,14,18,0.44,35.17,32,32,11,13,null,1,1,"no","C/C","No",1,104.95,"XP_015835928.1:c.[2416T>G]; XP_015835929.1:c.[2416T>G]; XP_015835930.1:c.[2260T>G]","XP_015835928.1:p.[Ser806Ala]; XP_015835929.1:p.[Ser806Ala]; XP_015835930.1:p.[Ser754Ala]","LOC663865",663865,null,"663865 [Gene Symbol: LOC663865] [Locus Tag: TcasGA2_TC013095] [Chromosome: LG5] [Map Location: ] [Description: neuroligin 2] [Gene Type: protein-coding]","TcasGA2_TC013095; LOC663865; NLG-2"]
[653,"NC_007420.3",14131834,"SNV","T","A","Heterozygous",19,25,76,0.99,18,4,0.18,38.32,22,28,7,10,1.46,0.77,0.94,"no","A/T","No",1,19.94,"XP_975053.1:c.1942T>A","XP_975053.1:p.Ser648Thr","LOC663932",663932,null,"663932 [Gene Symbol: LOC663932] [Locus Tag: TcasGA2_TC014727] [Chromosome: LG5] [Map Location: ] [Description: venom dipeptidyl peptidase 4] [Gene Type: protein-coding]","TcasGA2_TC014727; LOC663932"]
[654,"NC_007420.3",14132190,"SNV","G","T","Heterozygous",5,21,23.81,0.96,5,3,0.38,37.2,8,27,4,3,-0.41,0.05,0.79,"no","G/T","No",1,13.62,"XP_975053.1:c.2204G>T","XP_975053.1:p.Arg735Leu","LOC663932",663932,null,"663932 [Gene Symbol: LOC663932] [Locus Tag: TcasGA2_TC014727] [Chromosome: LG5] [Map Location: ] [Description: venom dipeptidyl peptidase 4] [Gene Type: protein-coding]","TcasGA2_TC014727; LOC663932"]
[655,"NC_007420.3",14290812,"SNV","C","A","Heterozygous",5,21,23.81,0.96,5,0,0,39.4,5,25,2,4,1.28,0.06,0.08,"no","A/C","No",1,13.75,"XP_975212.1:c.305C>A","XP_975212.1:p.Ser102Tyr","LOC664103",664103,null,"664103 [Gene Symbol: LOC664103] [Locus Tag: TcasGA2_TC014736] [Chromosome: LG5] [Map Location: ] [Description: protein asteroid] [Gene Type: protein-coding]","TcasGA2_TC014736; LOC664103"]
[656,"NC_007420.3",14327047,"SNV","C","G","Heterozygous",5,21,23.81,0.99,5,0,0,38.2,5,25,2,2,0.7,0.17,0.49,"no","C/G","No",1,18.59,"XP_015835753.1:c.[1385C>G]; XP_008194426.1:c.[1397C>G]; XP_015835754.1:c.[1340C>G]; XP_008194428.1:c.[1349C>G]; XP_015835751.1:c.[1397C>G]; XP_008194425.1:c.[1397C>G]; XP_008194427.1:c.[1388C>G]; XP_015835752.1:c.[1397C>G]","XP_015835753.1:p.[Pro462Arg]; XP_008194426.1:p.[Pro466Arg]; XP_015835754.1:p.[Pro447Arg]; XP_008194428.1:p.[Pro450Arg]; XP_015835751.1:p.[Pro466Arg]; XP_008194425.1:p.[Pro466Arg]; XP_008194427.1:p.[Pro463Arg]; XP_015835752.1:p.[Pro466Arg]","LOC100142159",100142159,null,"100142159 [Gene Symbol: LOC100142159] [Locus Tag: TcasGA2_TC014741] [Chromosome: LG5] [Map Location: ] [Description: PR domain zinc finger protein 1] [Gene Type: protein-coding]","Blimp-1; TcasGA2_TC014741; LOC100142159"]
[657,"NC_007420.3",14839129,"SNV","G","C","Homozygous",24,24,100,1,15,10,0.4,37.67,25,25,9,15,null,1,1,"no","C/C","No",1,92.92,"XP_015836117.1:c.[8335G>C]; XP_008194080.1:c.[8332G>C]; XP_008194079.1:c.[8338G>C]; XP_015836119.1:c.[8338G>C]","XP_015836117.1:p.[Glu2779Gln]; XP_008194080.1:p.[Glu2778Gln]; XP_008194079.1:p.[Glu2780Gln]; XP_015836119.1:p.[Glu2780Gln]","LOC657573",657573,null,"657573 [Gene Symbol: LOC657573] [Locus Tag: TcasGA2_TC014768] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC657573] [Gene Type: protein-coding]","LOC657573; TcasGA2_TC014768"]
[658,"NC_007420.3",14853930,"SNV","C","T","Heterozygous",14,20,70,1,11,5,0.31,37.64,16,22,6,10,-0.62,0.2,1,"no","C/T","No",1,35.4,"XP_976260.1:c.590G>A","XP_976260.1:p.Cys197Tyr","LOC657886",657886,null,"657886 [Gene Symbol: LOC657886] [Locus Tag: TcasGA2_TC013035] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC657886] [Gene Type: protein-coding]","LOC657886; TcasGA2_TC013035"]
[659,"NC_007420.3",15073270,"SNV","C","T","Homozygous",23,23,100,1,17,15,0.47,36.74,32,32,10,12,null,1,1,"no","T/T","No",1,88.54,"XP_015835700.1:c.[1055G>A]; XP_015835698.1:c.[1055G>A]; XP_015835708.1:c.[1055G>A]; XP_015835701.1:c.[1055G>A]; XP_015835706.1:c.[1055G>A]; XP_015835703.1:c.[1055G>A]; XP_015835697.1:c.[1055G>A]; XP_015835710.1:c.[1055G>A]; XP_015835694.1:c.[1055G>A]; XP_015835702.1:c.[1055G>A]; XP_015835699.1:c.[1055G>A]; XP_015835705.1:c.[1055G>A]; XP_015835695.1:c.[1055G>A]; XP_015835709.1:c.[1055G>A]; XP_015835707.1:c.[1055G>A]; XP_015835696.1:c.[1055G>A]; XP_015835704.1:c.[1055G>A]","XP_015835700.1:p.[Ser352Asn]; XP_015835698.1:p.[Ser352Asn]; XP_015835708.1:p.[Ser352Asn]; XP_015835701.1:p.[Ser352Asn]; XP_015835706.1:p.[Ser352Asn]; XP_015835703.1:p.[Ser352Asn]; XP_015835697.1:p.[Ser352Asn]; XP_015835710.1:p.[Ser352Asn]; XP_015835694.1:p.[Ser352Asn]; XP_015835702.1:p.[Ser352Asn]; XP_015835699.1:p.[Ser352Asn]; XP_015835705.1:p.[Ser352Asn]; XP_015835695.1:p.[Ser352Asn]; XP_015835709.1:p.[Ser352Asn]; XP_015835707.1:p.[Ser352Asn]; XP_015835696.1:p.[Ser352Asn]; XP_015835704.1:p.[Ser352Asn]","LOC100141714",100141714,null,"100141714 [Gene Symbol: LOC100141714] [Locus Tag: TcasGA2_TC013022] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: coiled-coil domain-containing protein AGAP005037] [Gene Type: protein-coding]","TcasGA2_TC013022; LOC100141714"]
[660,"NC_007420.3",15092866,"SNV","C","A","Heterozygous",6,22,27.27,1,6,0,0,37.83,6,24,1,5,1,0.12,0.13,"no","A/C","No",1,23.56,"XP_001811459.1:c.290C>A","XP_001811459.1:p.Ala97Glu","LOC100142525",100142525,null,"100142525 [Gene Symbol: LOC100142525] [Locus Tag: TcasGA2_TC033263] [Chromosome: LG5] [Map Location: ] [Description: WD repeat domain-containing protein 83] [Gene Type: protein-coding]","LOC100142525; TcasGA2_TC033263"]
[661,"NC_007421.3",225708,"SNV","T","C","Homozygous",23,23,100,1,10,19,0.34,38.43,29,29,7,6,null,1,1,"no","C/C","No",1,86.9,"XP_008194480.2:c.2500A>G","XP_008194480.2:p.Thr834Ala","LOC658944",658944,null,"658944 [Gene Symbol: LOC658944] [Locus Tag: TcasGA2_TC015340] [Chromosome: LG6] [Map Location: ] [Description: fatty acid synthase] [Gene Type: protein-coding]","TcasGA2_TC015340; LOC658944"]
[662,"NC_007421.3",225727,"SNV","T","A","Homozygous",20,20,100,1,8,19,0.3,39.9,27,27,6,6,null,1,1,"no","A/A","No",1,82.49,"XP_008194480.2:c.2481A>T","XP_008194480.2:p.Leu827Phe","LOC658944",658944,null,"658944 [Gene Symbol: LOC658944] [Locus Tag: TcasGA2_TC015340] [Chromosome: LG6] [Map Location: ] [Description: fatty acid synthase] [Gene Type: protein-coding]","TcasGA2_TC015340; LOC658944"]
[663,"NC_007421.3",244980,"SNV","C","T","Heterozygous",6,21,28.57,1,4,5,0.44,39.5,9,24,4,5,-0.16,0.24,0.93,"no","C/T","No",1,30.94,"XP_970599.2:c.4507G>A","XP_970599.2:p.Glu1503Lys","LOC659179",659179,null,"659179 [Gene Symbol: LOC659179] [Locus Tag: TcasGA2_TC015337] [Chromosome: LG6] [Map Location: ] [Description: fatty acid synthase] [Gene Type: protein-coding]","TcasGA2_TC015337; LOC659179"]
[664,"NC_007421.3",364242,"SNV","C","A","Heterozygous",9,27,33.33,1,0,9,0,35,9,27,1,2,-2.26,0.03,1,"no","A/C","No",1,47.95,"XP_971466.1:c.6055C>A","XP_971466.1:p.His2019Asn","LOC660113",660113,null,"660113 [Gene Symbol: LOC660113] [Locus Tag: TcasGA2_TC015399] [Chromosome: LG6] [Map Location: ] [Description: fatty acid synthase] [Gene Type: protein-coding]","LOC660113; TcasGA2_TC015399"]
[665,"NC_007421.3","404257..404258","MNV","TA","AC","Heterozygous",13,22,59.09,1,13,2,0.13,35.29,15,28,6,10,-1.48,0.75,0.9,"no","complex","No",1,200,"XP_971859.1:c.273_274delTAinsAC","XP_971859.1:p.Asn91_Thr92delinsLysPro","LOC660543",660543,null,"660543 [Gene Symbol: LOC660543] [Locus Tag: TcasGA2_TC015403] [Chromosome: LG6] [Map Location: ] [Description: structure-specific endonuclease subunit slx1] [Gene Type: protein-coding]","LOC660543; TcasGA2_TC015403"]
[666,"NC_007421.3",498001,"SNV","A","T","Homozygous",25,25,100,1,19,10,0.34,37.52,29,29,7,15,null,1,1,"no","T/T","No",1,94.56,"XP_972276.1:c.790A>T","XP_972276.1:p.Asn264Tyr","LOC661052, LOC660992","661052 , 660992",null,"661052 [Gene Symbol: LOC661052] [Locus Tag: TcasGA2_TC015408] [Chromosome: LG6] [Map Location: ] [Description: mevalonate kinase] [Gene Type: protein-coding] || 660992 [Gene Symbol: LOC660992] [Locus Tag: TcasGA2_TC015407] [Chromosome: LG6] [Map Location: ] [Description: dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase] [Gene Type: protein-coding]","TcasGA2_TC015408; LOC661052 || TcasGA2_TC015407; LOC660992"]
[667,"NC_007421.3",587953,"SNV","C","T","Homozygous",21,21,100,1,13,11,0.46,36.52,24,24,8,11,null,1,1,"no","T/T","No",1,85.53,"XP_001814107.1:c.1417G>A","XP_001814107.1:p.Asp473Asn","LOC100142538",100142538,null,"100142538 [Gene Symbol: LOC100142538] [Locus Tag: TcasGA2_TC015314] [Chromosome: LG6] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100142538; TcasGA2_TC015314"]
[668,"NC_007421.3",587965,"SNV","C","T","Heterozygous",12,22,54.55,1,3,9,0.25,37.58,12,25,2,6,2.97,0.57,0.44,"no","C/T","No",1,80.88,"XP_001814107.1:c.1405G>A","XP_001814107.1:p.Glu469Lys","LOC100142538",100142538,null,"100142538 [Gene Symbol: LOC100142538] [Locus Tag: TcasGA2_TC015314] [Chromosome: LG6] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100142538; TcasGA2_TC015314"]
[669,"NC_007421.3",587977,"SNV","T","G","Heterozygous",14,22,63.64,1,5,9,0.36,38.64,14,26,3,8,3.38,0.89,0.85,"no","G/T","No",1,48.94,"XP_001814107.1:c.1393A>C","XP_001814107.1:p.Thr465Pro","LOC100142538",100142538,null,"100142538 [Gene Symbol: LOC100142538] [Locus Tag: TcasGA2_TC015314] [Chromosome: LG6] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100142538; TcasGA2_TC015314"]
[670,"NC_007421.3",588649,"SNV","C","G","Homozygous",25,25,100,1,19,7,0.27,36.84,26,26,8,17,null,1,1,"no","G/G","No",1,95.93,"XP_001814107.1:c.721G>C","XP_001814107.1:p.Ala241Pro","LOC100142538",100142538,null,"100142538 [Gene Symbol: LOC100142538] [Locus Tag: TcasGA2_TC015314] [Chromosome: LG6] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100142538; TcasGA2_TC015314"]
[671,"NC_007421.3",605475,"SNV","T","C","Heterozygous",10,23,43.48,1,0,10,0,37.9,10,23,4,5,1.95,0.12,0.05,"no","C/T","No",1,78.08,"XP_001814158.1:c.529A>G","XP_001814158.1:p.Thr177Ala","LOC100142136",100142136,null,"100142136 [Gene Symbol: LOC100142136] [Locus Tag: TcasGA2_TC015313] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142136] [Gene Type: protein-coding]","LOC100142136; TcasGA2_TC015313"]
[672,"NC_007421.3",614484,"SNV","G","A","Heterozygous",12,20,60,1,6,10,0.38,37.17,16,24,6,4,-1.23,0.11,0.62,"no","A/G","No",1,60.87,"XP_001814185.2:c.[482G>A]; XP_008194502.1:c.[482G>A]; XP_015836198.1:c.[482G>A]; XP_008194503.1:c.[482G>A]; XP_015836200.1:c.[482G>A]; XP_008194504.1:c.[41G>A]","XP_001814185.2:p.[Ser161Asn]; XP_008194502.1:p.[Ser161Asn]; XP_015836198.1:p.[Ser161Asn]; XP_008194503.1:p.[Ser161Asn]; XP_015836200.1:p.[Ser161Asn]; XP_008194504.1:p.[Ser14Asn]","LOC100141937",100141937,null,"100141937 [Gene Symbol: LOC100141937] [Locus Tag: TcasGA2_TC015419] [Chromosome: LG6] [Map Location: ] [Description: biotin--protein ligase] [Gene Type: protein-coding]","TcasGA2_TC015419; LOC100141937"]
[673,"NC_007421.3",733293,"SNV","G","C","Heterozygous",13,26,50,1,6,11,0.35,36.92,17,30,8,5,0.67,0.04,0.31,"no","C/G","No",1,103.92,"XP_001814494.2:c.24G>C","XP_001814494.2:p.Leu8Phe","LOC100141658",100141658,null,"100141658 [Gene Symbol: LOC100141658] [Locus Tag: TcasGA2_TC015423] [Chromosome: LG6] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC100141658; TcasGA2_TC015423"]
[674,"NC_007421.3",931189,"SNV","G","T","Homozygous",22,22,100,1,6,21,0.22,37.68,27,27,9,9,null,1,1,"no","T/T","No",1,88.54,"XP_015836193.1:c.1976C>A","XP_015836193.1:p.Ala659Glu","LOC662514",662514,null,"662514 [Gene Symbol: LOC662514] [Locus Tag: TcasGA2_TC015286] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: uncharacterized LOC662514] [Gene Type: protein-coding]","LOC662514; TcasGA2_TC015286"]
[675,"NC_007421.3",969742,"SNV","G","A","Heterozygous",15,20,75,0.99,9,7,0.44,37.27,16,21,4,9,-0.04,0.85,0.88,"no","A/G","No",1,22.57,"XP_015836335.1:c.[1469C>T]; XP_008194565.1:c.[2150C>T]; XP_008194566.1:c.[1880C>T]","XP_015836335.1:p.[Ser490Leu]; XP_008194565.1:p.[Ser717Leu]; XP_008194566.1:p.[Ser627Leu]","LOC654933",654933,null,"654933 [Gene Symbol: LOC654933] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: myosin 18] [Gene Type: protein-coding]","LOC654933; Myo18"]
[676,"NC_007421.3",969794,"SNV","T","C","Homozygous",19,20,95,1,6,13,0.32,38.58,19,20,7,11,null,0.99,1,"no","C/C","No",1,50.28,"XP_008194565.1:c.[2098A>G]; XP_015836335.1:c.[1417A>G]; XP_008194566.1:c.[1828A>G]","XP_008194565.1:p.[Thr700Ala]; XP_015836335.1:p.[Thr473Ala]; XP_008194566.1:p.[Thr610Ala]","LOC654933",654933,null,"654933 [Gene Symbol: LOC654933] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: myosin 18] [Gene Type: protein-coding]","LOC654933; Myo18"]
[677,"NC_007421.3",979155,"SNV","C","T","Heterozygous",7,21,33.33,1,6,4,0.4,37.57,10,26,4,7,0.82,0.76,0.53,"no","C/T","No",1,46.5,"XP_008194566.1:c.[402+4901G>A]; XP_008194565.1:c.[596G>A]","XP_008194565.1:p.Arg199Lys","LOC654933",654933,null,"654933 [Gene Symbol: LOC654933] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: myosin 18] [Gene Type: protein-coding]","LOC654933; Myo18"]
[678,"NC_007421.3",1619276,"SNV","G","T","Heterozygous",6,24,25,0.98,6,0,0,39.5,6,24,2,5,1.43,0.03,0.41,"no","G/T","No",1,17.87,"XP_001813297.1:c.575C>A","XP_001813297.1:p.Pro192His","LOC662822",662822,null,"662822 [Gene Symbol: LOC662822] [Locus Tag: TcasGA2_TC015199] [Chromosome: LG6] [Map Location: ] [Description: GPN-loop GTPase 3] [Gene Type: protein-coding]","TcasGA2_TC015199; LOC662822"]
[679,"NC_007421.3",1648319,"SNV","A","C","Heterozygous",9,23,39.13,1,0,9,0,35.56,9,27,4,4,-0.69,0.35,0.16,"no","A/C","No",1,66.95,"XP_974227.1:c.565T>G","XP_974227.1:p.Ser189Ala","LOC663073",663073,null,"663073 [Gene Symbol: LOC663073] [Locus Tag: TcasGA2_TC015197] [Chromosome: LG6] [Map Location: ] [Description: centromere protein J] [Gene Type: protein-coding]","TcasGA2_TC015197; LOC663073"]
[680,"NC_007421.3",1650390,"SNV","T","A","Homozygous",22,22,100,1,21,7,0.25,36.32,28,28,6,13,null,1,1,"no","A/A","No",1,88.51,"XP_015836343.1:c.[720T>A]; XP_015836344.1:c.[675T>A]","XP_015836343.1:p.[Asp240Glu]; XP_015836344.1:p.[Asp225Glu]","LOC663099",663099,null,"663099 [Gene Symbol: LOC663099] [Locus Tag: TcasGA2_TC015513] [Chromosome: LG6] [Map Location: ] [Description: rhomboid-4] [Gene Type: protein-coding]","rho-4; TcasGA2_TC015513; LOC663099"]
[681,"NC_007421.3",1662731,"SNV","C","T","Heterozygous",6,25,24,0.99,0,6,0,38.83,6,31,1,2,-0.29,0.06,0.35,"no","C/T","No",1,19.87,"XP_015836384.1:c.[917G>A]; XP_008194666.1:c.[986G>A]","XP_015836384.1:p.[Arg306Gln]; XP_008194666.1:p.[Arg329Gln]","LOC103313370",103313370,null,"103313370 [Gene Symbol: LOC103313370] [Locus Tag: TcasGA2_TC015196] [Chromosome: LG6] [Map Location: ] [Description: immunoglobulin A1 protease autotransporter] [Gene Type: protein-coding]","TcasGA2_TC015196; LOC103313370"]
[682,"NC_007421.3",2018980,"SNV","A","G","Homozygous",23,23,100,1,2,23,0.08,38.74,25,25,6,10,null,1,1,"no","G/G","No",1,89.91,"XP_966816.1:c.2380A>G","XP_966816.1:p.Ile794Val","LOC655207",655207,null,"655207 [Gene Symbol: LOC655207] [Locus Tag: TcasGA2_TC015532] [Chromosome: LG6] [Map Location: ] [Description: carboxypeptidase D] [Gene Type: protein-coding]","TcasGA2_TC015532; LOC655207"]
[683,"NC_007421.3","2038429..2038431","Deletion","CGT","-","Heterozygous",16,28,57.14,1,11,5,0.31,37.25,16,29,7,14,-3.53,0.36,0.73,"no","complex","No",1,200,"XP_008201593.1:c.[1472_1474delCGT]; XP_008201602.1:c.[1364_1366delCGT]; XP_008201596.1:c.[1463_1465delCGT]","XP_008201593.1:p.[Ser493del]; XP_008201602.1:p.[Ser457del]; XP_008201596.1:p.[Ser490del]","LOC103315223",103315223,null,"103315223 [Gene Symbol: LOC103315223] [Locus Tag: TcasGA2_TC015535] [Chromosome: LG6] [Map Location: ] [Description: putative mediator of RNA polymerase II transcription subunit 26] [Gene Type: protein-coding]","LOC103315223; TcasGA2_TC015535"]
[684,"NC_007421.3",2038633,"SNV","T","C","Heterozygous",6,21,28.57,1,0,6,0,35.33,6,21,3,4,-2.88,0.03,0.03,"no","C/T","No",1,32.53,"XP_008201593.1:c.[1676T>C]; XP_008201602.1:c.[1568T>C]; XP_008201596.1:c.[1667T>C]","XP_008201593.1:p.[Ile559Thr]; XP_008201602.1:p.[Ile523Thr]; XP_008201596.1:p.[Ile556Thr]","LOC103315223",103315223,null,"103315223 [Gene Symbol: LOC103315223] [Locus Tag: TcasGA2_TC015535] [Chromosome: LG6] [Map Location: ] [Description: putative mediator of RNA polymerase II transcription subunit 26] [Gene Type: protein-coding]","LOC103315223; TcasGA2_TC015535"]
[685,"NC_007421.3",2038635,"SNV","G","C","Heterozygous",15,21,71.43,1,14,1,0.07,38.33,15,21,4,10,2.53,0.2,0.25,"no","C/G","No",1,31.33,"XP_008201602.1:c.[1570G>C]; XP_008201596.1:c.[1669G>C]; XP_008201593.1:c.[1678G>C]","XP_008201602.1:p.[Val524Leu]; XP_008201596.1:p.[Val557Leu]; XP_008201593.1:p.[Val560Leu]","LOC103315223",103315223,null,"103315223 [Gene Symbol: LOC103315223] [Locus Tag: TcasGA2_TC015535] [Chromosome: LG6] [Map Location: ] [Description: putative mediator of RNA polymerase II transcription subunit 26] [Gene Type: protein-coding]","LOC103315223; TcasGA2_TC015535"]
[686,"NC_007421.3",2132364,"SNV","G","T","Homozygous",25,25,100,1,13,12,0.48,39,25,25,6,15,null,1,1,"no","T/T","No",1,97.56,"XP_008190317.1:c.[4156C>A]; XP_008190308.1:c.[4165C>A]; XP_008190313.1:c.[4162C>A]; XP_008190304.1:c.[4165C>A]","XP_008190317.1:p.[Arg1386Ser]; XP_008190308.1:p.[Arg1389Ser]; XP_008190313.1:p.[Arg1388Ser]; XP_008190304.1:p.[Arg1389Ser]","LOC657418",657418,null,"657418 [Gene Symbol: LOC657418] [Locus Tag: TcasGA2_TC015164] [Chromosome: LG6] [Map Location: ] [Description: ankyrin repeat domain-containing protein 50] [Gene Type: protein-coding]","TcasGA2_TC015164; LOC657418"]
[687,"NC_007421.3",2180296,"SNV","C","A","Heterozygous",5,21,23.81,0.96,0,5,0,34.4,5,21,1,1,-3.3,{"v":0.00899,"d":"8.99E-03"},0.27,"no","A/C","No",1,13.76,"XP_969409.1:c.[373C>A]; XP_008190371.1:c.[385C>A]","XP_969409.1:p.[Pro125Thr]; XP_008190371.1:p.[Pro129Thr]","LOC657888",657888,null,"657888 [Gene Symbol: LOC657888] [Locus Tag: TcasGA2_TC015549] [Chromosome: LG6] [Map Location: ] [Description: glycine-rich cell wall structural protein] [Gene Type: protein-coding]","TcasGA2_TC015549; LOC657888"]
[688,"NC_007421.3",2192930,"SNV","C","T","Heterozygous",9,20,45,1,6,3,0.33,38.44,9,20,5,5,-0.15,0.18,0.84,"no","C/T","No",1,71.96,"XP_015836266.1:c.1144C>T","XP_015836266.1:p.Arg382Cys","LOC658048",658048,null,"658048 [Gene Symbol: LOC658048] [Locus Tag: TcasGA2_TC015551] [Chromosome: LG6] [Map Location: ] [Description: cytochrome P450 6a9] [Gene Type: protein-coding]","LOC658048; CYP6BK14; TcasGA2_TC015551"]
[689,"NC_007421.3","2280898..2280899","MNV","TG","CA","Heterozygous",5,20,25,1,0,5,0,38,5,25,2,4,1.72,0.13,0.24,"no","complex","No",1,200,"XP_008190442.1:c.36_37delCAinsTG","XP_008190442.1:p.Ile13Val","LOC659018, LOC103312193","659018 , 103312193",null,"659018 [Gene Symbol: LOC659018] [Locus Tag: TcasGA2_TC015557] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC659018] [Gene Type: protein-coding] || 103312193 [Gene Symbol: LOC103312193] [Locus Tag: TcasGA2_TC015155] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC659018; TcasGA2_TC015557 || LOC103312193; TcasGA2_TC015155"]
[690,"NC_007421.3",2297996,"SNV","A","T","Heterozygous",11,25,44,1,4,10,0.29,36.36,14,30,5,4,-0.77,0.68,0.9,"no","A/T","No",1,83.75,"XP_970450.1:c.[659A>T]; XP_008190453.1:c.[659A>T]; XP_015836362.1:c.[659A>T]","XP_970450.1:p.[Tyr220Phe]; XP_008190453.1:p.[Tyr220Phe]; XP_015836362.1:p.[Tyr220Phe]","LOC659018",659018,null,"659018 [Gene Symbol: LOC659018] [Locus Tag: TcasGA2_TC015557] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC659018] [Gene Type: protein-coding]","LOC659018; TcasGA2_TC015557"]
[691,"NC_007421.3",2321182,"SNV","A","G","Homozygous",38,38,100,1,17,22,0.44,39.08,39,39,13,20,null,1,1,"no","G/G","No",1,135.01,"XP_008190481.1:c.[1494+23A>G]; XP_008190476.1:c.[1517A>G]","XP_008190476.1:p.Lys506Arg","LOC103312202",103312202,null,"103312202 [Gene Symbol: LOC103312202] [Locus Tag: TcasGA2_TC015562] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312202; TcasGA2_TC015562"]
[692,"NC_007421.3",2327875,"SNV","T","G","Heterozygous",8,25,32,1,4,7,0.36,35.12,11,28,4,6,-0.09,0.3,1,"no","G/T","No",1,48.37,"XP_970863.2:c.[2046A>C]; XP_008190490.1:c.[2154A>C]","XP_970863.2:p.[Gln682His]; XP_008190490.1:p.[Gln718His]","LOC659466",659466,null,"659466 [Gene Symbol: LOC659466] [Locus Tag: TcasGA2_TC015153] [Chromosome: LG6] [Map Location: ] [Description: jmjC domain-containing histone demethylation protein 1] [Gene Type: protein-coding]","LOC659466; TcasGA2_TC015153"]
[693,"NC_007421.3",2405823,"SNV","G","C","Homozygous",31,31,100,1,23,13,0.36,37.23,36,36,11,18,null,1,1,"no","C/C","No",1,113.98,"XP_015836307.1:c.550C>G","XP_015836307.1:p.Pro184Ala","LOC107398059",107398059,null,"107398059 [Gene Symbol: LOC107398059] [Locus Tag: TcasGA2_TC015145] [Chromosome: LG6] [Map Location: ] [Description: keratin-associated protein 9-1-like] [Gene Type: protein-coding]","LOC107398059; TcasGA2_TC015145"]
[694,"NC_007421.3",2451777,"SNV","A","G","Homozygous",22,22,100,1,15,7,0.32,39.5,22,22,4,13,null,1,1,"no","G/G","No",1,86.89,"XP_008190620.1:c.[3503T>C]; XP_008190626.1:c.[3461T>C]","XP_008190620.1:p.[Val1168Ala]; XP_008190626.1:p.[Val1154Ala]","LOC661054, LOC660604","661054 , 660604",null,"661054 [Gene Symbol: LOC661054] [Locus Tag: TcasGA2_TC015569] [Chromosome: LG6] [Map Location: ] [Description: inter-alpha-trypsin inhibitor heavy chain H4] [Gene Type: protein-coding] || 660604 [Gene Symbol: LOC660604] [Locus Tag: TcasGA2_TC015138] [Chromosome: LG6] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 9] [Gene Type: protein-coding]","LOC661054; TcasGA2_TC015569 || LOC660604; TcasGA2_TC015138; ADAMTS9"]
[695,"NC_007421.3",2494759,"SNV","A","T","Heterozygous",7,22,31.82,1,0,7,0,39.29,7,26,2,2,0.39,0.12,0.13,"no","A/T","No",1,41.03,"XP_015836295.1:c.[18+132A>T]; XP_015836296.1:c.[18+132A>T]; XP_015836292.1:c.[91A>T]; XP_015836297.1:c.[91A>T]; XP_015836293.1:c.[91A>T]; XP_015836294.1:c.[18+132A>T]; XP_015836303.1:c.[564+3670A>T]","XP_015836292.1:p.[Ser31Cys]; XP_015836297.1:p.[Ser31Cys]; XP_015836293.1:p.[Ser31Cys]","LOC661054, LOC103312278, LOC660828","661054 , 103312278 , 660828",null,"661054 [Gene Symbol: LOC661054] [Locus Tag: TcasGA2_TC015569] [Chromosome: LG6] [Map Location: ] [Description: inter-alpha-trypsin inhibitor heavy chain H4] [Gene Type: protein-coding] || 103312278 [Gene Symbol: LOC103312278] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: inter-alpha-trypsin inhibitor heavy chain H4-like] [Gene Type: protein-coding] || 660828 [Gene Symbol: LOC660828] [Locus Tag: TcasGA2_TC033375] [Chromosome: LG6] [Map Location: ] [Description: inter-alpha-trypsin inhibitor heavy chain H4-like] [Gene Type: protein-coding]","LOC661054; TcasGA2_TC015569 || LOC103312278 || LOC660828; TcasGA2_TC033375"]
[696,"NC_007421.3",2706646,"SNV","T","C","Homozygous",25,25,100,1,22,10,0.31,37.16,32,32,11,18,null,1,1,"no","C/C","No",1,95.93,"XP_973265.1:c.424A>G","XP_973265.1:p.Ile142Val","LOC662049",662049,null,"662049 [Gene Symbol: LOC662049] [Locus Tag: TcasGA2_TC015584] [Chromosome: LG6] [Map Location: ] [Description: ribosome biogenesis protein BOP1 homolog] [Gene Type: protein-coding]","LOC662049; TcasGA2_TC015584"]
[697,"NC_007421.3",2706882,"SNV","T","A","Heterozygous",19,25,76,1,9,11,0.45,37.21,20,26,9,9,-0.54,0.59,0.94,"no","complex","No",1,200,"XP_973265.1:c.188A>T","XP_973265.1:p.Asp63Val","LOC662049",662049,null,"662049 [Gene Symbol: LOC662049] [Locus Tag: TcasGA2_TC015584] [Chromosome: LG6] [Map Location: ] [Description: ribosome biogenesis protein BOP1 homolog] [Gene Type: protein-coding]","LOC662049; TcasGA2_TC015584"]
[698,"NC_007421.3",2706886,"SNV","A","T","Heterozygous",6,27,22.22,0.96,6,0,0,37,6,28,1,5,-0.73,{"v":0.00904,"d":"9.04E-03"},0.16,"no","A/T","No",1,14.45,"XP_973265.1:c.184T>A","XP_973265.1:p.Ser62Thr","LOC662049",662049,null,"662049 [Gene Symbol: LOC662049] [Locus Tag: TcasGA2_TC015584] [Chromosome: LG6] [Map Location: ] [Description: ribosome biogenesis protein BOP1 homolog] [Gene Type: protein-coding]","LOC662049; TcasGA2_TC015584"]
[699,"NC_007421.3",2794378,"SNV","G","A","Heterozygous",8,20,40,1,6,3,0.33,37.25,9,24,3,5,2.35,0.88,1,"no","A/G","No",1,59.27,"XP_008194700.1:c.6832G>A","XP_008194700.1:p.Ala2278Thr","LOC662012, LOC661642","662012 , 661642",null,"662012 [Gene Symbol: LOC662012] [Locus Tag: TcasGA2_TC015581] [Chromosome: LG6] [Map Location: ] [Description: protein neuralized] [Gene Type: protein-coding] || 661642 [Gene Symbol: LOC661642] [Locus Tag: TcasGA2_TC015132] [Chromosome: LG6] [Map Location: ] [Description: tetratricopeptide repeat protein 28] [Gene Type: protein-coding]","TcasGA2_TC015581; LOC662012 || LOC661642; TcasGA2_TC015132"]
[700,"NC_007421.3",2794444,"SNV","G","A","Homozygous",21,21,100,1,5,17,0.23,38.05,22,22,10,11,null,1,1,"no","A/A","No",1,85.5,"XP_008194700.1:c.6898G>A","XP_008194700.1:p.Val2300Ile","LOC662012, LOC661642","662012 , 661642",null,"662012 [Gene Symbol: LOC662012] [Locus Tag: TcasGA2_TC015581] [Chromosome: LG6] [Map Location: ] [Description: protein neuralized] [Gene Type: protein-coding] || 661642 [Gene Symbol: LOC661642] [Locus Tag: TcasGA2_TC015132] [Chromosome: LG6] [Map Location: ] [Description: tetratricopeptide repeat protein 28] [Gene Type: protein-coding]","TcasGA2_TC015581; LOC662012 || LOC661642; TcasGA2_TC015132"]
[701,"NC_007421.3",3323109,"SNV","T","A","Heterozygous",16,20,80,0.87,15,5,0.25,36.75,20,24,7,11,0.09,0.89,0.84,"no","A/T","No",1,8.88,"XP_015836392.1:c.[797T>A]; XP_015836393.1:c.[797T>A]","XP_015836392.1:p.[Val266Asp]; XP_015836393.1:p.[Val266Asp]","LOC103313397",103313397,null,"103313397 [Gene Symbol: LOC103313397] [Locus Tag: TcasGA2_TC015600] [Chromosome: LG6] [Map Location: ] [Description: zinc finger protein 711] [Gene Type: protein-coding]","TcasGA2_TC015600; LOC103313397"]
[702,"NC_007421.3","3325610..3325611","MNV","CA","GT","Homozygous",18,21,85.71,1,11,11,0.5,37.08,22,25,7,14,null,1,1,"no","GT/GT","No",1,200,"XP_008194723.1:c.160_161delTGinsAC","XP_008194723.1:p.Cys54Thr","LOC657029",657029,null,"657029 [Gene Symbol: LOC657029] [Locus Tag: TcasGA2_TC015101] [Chromosome: LG6] [Map Location: ] [Description: farnesol dehydrogenase] [Gene Type: protein-coding]","LOC657029; TcasGA2_TC015101"]
[703,"NC_007421.3",3375821,"SNV","G","T","Heterozygous",6,22,27.27,1,6,0,0,35.17,6,24,1,5,-1.22,{"v":0.00805,"d":"8.05E-03"},0.03,"no","G/T","No",1,23.42,"XP_015836277.1:c.373G>T","XP_015836277.1:p.Glu125*","LOC657810",657810,null,"657810 [Gene Symbol: LOC657810] [Locus Tag: TcasGA2_TC015605] [Chromosome: LG6] [Map Location: ] [Description: serine/threonine-protein kinase TAO1] [Gene Type: protein-coding]","TcasGA2_TC015605; LOC657810"]
[704,"NC_007421.3",3419947,"SNV","T","G","Homozygous",22,22,100,1,12,16,0.43,36.91,28,28,8,12,null,1,1,"no","G/G","No",1,86.9,"XP_008194738.1:c.[1337T>G]; XP_008194736.1:c.[1337T>G]; XP_008194737.1:c.[1337T>G]","XP_008194738.1:p.[Leu446Arg]; XP_008194736.1:p.[Leu446Arg]; XP_008194737.1:p.[Leu446Arg]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[705,"NC_007421.3","3419972^3419973","Insertion","-","A","Heterozygous",12,24,50,1,8,11,0.42,35.58,19,32,5,7,-3.32,0.78,1,"no","-/A","No",1,95.68,"XP_008194738.1:c.[1362_1363insA]; XP_008194736.1:c.[1362_1363insA]; XP_008194737.1:c.[1362_1363insA]","XP_008194738.1:p.[Ile455fs]; XP_008194736.1:p.[Ile455fs]; XP_008194737.1:p.[Ile455fs]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[706,"NC_007421.3","3419974^3419975","Insertion","-","TG","Heterozygous",10,22,45.45,1,6,9,0.4,36.17,15,28,5,7,null,0.28,1,"no","complex","No",1,200,"XP_008194737.1:c.[1364_1365insTG]; XP_008194736.1:c.[1364_1365insTG]; XP_008194738.1:c.[1364_1365insTG]","XP_008194737.1:p.[Ser456fs]; XP_008194736.1:p.[Ser456fs]; XP_008194738.1:p.[Ser456fs]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[707,"NC_007421.3","3419974^3419975","Insertion","-","TTG","Heterozygous",12,22,54.55,1,4,9,0.31,38.58,13,28,4,8,null,0.39,0.99,"no","complex","No",1,200,"XP_008194736.1:c.[1364_1365insTTG]; XP_008194738.1:c.[1364_1365insTTG]; XP_008194737.1:c.[1364_1365insTTG]","XP_008194736.1:p.[Ile455_Ser456insCys]; XP_008194738.1:p.[Ile455_Ser456insCys]; XP_008194737.1:p.[Ile455_Ser456insCys]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[708,"NC_007421.3",3420010,"SNV","A","G","Heterozygous",10,28,35.71,1,4,6,0.4,40,10,28,3,5,2.45,0.68,1,"no","A/G","No",1,64.1,"XP_008194736.1:c.[1400A>G]; XP_008194737.1:c.[1400A>G]; XP_008194738.1:c.[1400A>G]","XP_008194736.1:p.[Lys467Arg]; XP_008194737.1:p.[Lys467Arg]; XP_008194738.1:p.[Lys467Arg]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[709,"NC_007421.3",3440551,"SNV","C","A","Homozygous",23,23,100,1,2,21,0.09,38.91,23,23,8,8,null,1,1,"no","A/A","No",1,91.51,"XP_015836350.1:c.[8579C>A]; XP_008194761.1:c.[8579C>A]; XP_015836349.1:c.[8579C>A]","XP_015836350.1:p.[Thr2860Lys]; XP_008194761.1:p.[Thr2860Lys]; XP_015836349.1:p.[Thr2860Lys]","LOC103313398",103313398,null,"103313398 [Gene Symbol: LOC103313398] [Locus Tag: TcasGA2_TC015610] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC103313398] [Gene Type: protein-coding]","LOC103313398; TcasGA2_TC015610"]
[710,"NC_007421.3",3440871,"SNV","C","G","Homozygous",26,26,100,1,22,6,0.21,34.69,28,28,7,20,null,1,1,"no","G/G","No",1,98.93,"XP_008194761.1:c.[8899C>G]; XP_015836350.1:c.[8899C>G]; XP_015836349.1:c.[8899C>G]","XP_008194761.1:p.[Pro2967Ala]; XP_015836350.1:p.[Pro2967Ala]; XP_015836349.1:p.[Pro2967Ala]","LOC103313398",103313398,null,"103313398 [Gene Symbol: LOC103313398] [Locus Tag: TcasGA2_TC015610] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC103313398] [Gene Type: protein-coding]","LOC103313398; TcasGA2_TC015610"]
[711,"NC_007421.3",3464253,"SNV","C","A","Heterozygous",8,26,30.77,1,0,8,0,40.5,8,26,1,2,1.78,0.11,0.22,"no","A/C","No",1,37.9,"XP_969916.1:c.1667C>A","XP_969916.1:p.Ser556*","LOC658435",658435,null,"658435 [Gene Symbol: LOC658435] [Locus Tag: TcasGA2_TC015614] [Chromosome: LG6] [Map Location: ] [Description: cytosolic 10-formyltetrahydrofolate dehydrogenase] [Gene Type: protein-coding]","TcasGA2_TC015614; LOC658435"]
[712,"NC_007421.3",3464571,"SNV","C","T","Homozygous",21,21,100,1,8,20,0.29,36.24,28,28,7,12,null,1,1,"no","T/T","No",1,85.53,"XP_969916.1:c.1934C>T","XP_969916.1:p.Thr645Met","LOC658435",658435,null,"658435 [Gene Symbol: LOC658435] [Locus Tag: TcasGA2_TC015614] [Chromosome: LG6] [Map Location: ] [Description: cytosolic 10-formyltetrahydrofolate dehydrogenase] [Gene Type: protein-coding]","TcasGA2_TC015614; LOC658435"]
[713,"NC_007421.3",3476314,"SNV","T","C","Homozygous",21,21,100,1,11,15,0.42,36.1,26,26,7,10,null,1,1,"no","C/C","No",1,83.88,"XP_001808976.1:c.142A>G","XP_001808976.1:p.Ile48Val","LOC100141756",100141756,null,"100141756 [Gene Symbol: LOC100141756] [Locus Tag: TcasGA2_TC015091] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100141756] [Gene Type: protein-coding]","LOC100141756; TcasGA2_TC015091"]
[714,"NC_007421.3",3596692,"SNV","T","C","Homozygous",22,22,100,1,16,14,0.47,35.95,30,30,8,13,null,1,1,"no","C/C","No",1,86.9,"XP_015836278.1:c.2956A>G","XP_015836278.1:p.Thr986Ala","LOC100142375",100142375,null,"100142375 [Gene Symbol: LOC100142375] [Locus Tag: TcasGA2_TC015081] [Chromosome: LG6] [Map Location: ] [Description: serine/threonine-protein kinase SIK3] [Gene Type: protein-coding]","LOC100142375; TcasGA2_TC015081"]
[715,"NC_007421.3",3596720,"SNV","C","G","Heterozygous",14,32,43.75,1,10,4,0.29,39.79,14,34,2,10,2.83,0.46,0.93,"no","C/G","No",1,102.92,"XP_015836278.1:c.2928G>C","XP_015836278.1:p.Glu976Asp","LOC100142375",100142375,null,"100142375 [Gene Symbol: LOC100142375] [Locus Tag: TcasGA2_TC015081] [Chromosome: LG6] [Map Location: ] [Description: serine/threonine-protein kinase SIK3] [Gene Type: protein-coding]","LOC100142375; TcasGA2_TC015081"]
[716,"NC_007421.3",3721296,"SNV","C","G","Homozygous",22,24,91.67,1,10,18,0.36,37.05,28,31,5,11,null,1,1,"no","G/G","No",1,28.91,"XP_001811460.1:c.[379G>C]; XP_008194798.1:c.[283G>C]","XP_001811460.1:p.[Ala127Pro]; XP_008194798.1:p.[Ala95Pro]","LOC660363, LOC100142445","660363 , 100142445",null,"660363 [Gene Symbol: LOC660363] [Locus Tag: TcasGA2_TC015073] [Chromosome: LG6] [Map Location: ] [Description: zinc finger Y-chromosomal protein 1] [Gene Type: protein-coding] || 100142445 [Gene Symbol: LOC100142445] [Locus Tag: TcasGA2_TC015076] [Chromosome: LG6] [Map Location: ] [Description: swi5-dependent recombination DNA repair protein 1 homolog] [Gene Type: protein-coding]","LOC660363; TcasGA2_TC015073 || TcasGA2_TC015076; LOC100142445"]
[717,"NC_007421.3",3721324,"SNV","C","G","Homozygous",22,22,100,1,11,13,0.46,37.73,24,24,7,13,null,1,1,"no","G/G","No",1,86.9,"XP_008194798.1:c.[255G>C]; XP_001811460.1:c.[351G>C]","XP_008194798.1:p.[Arg85Ser]; XP_001811460.1:p.[Arg117Ser]","LOC660363, LOC100142445","660363 , 100142445",null,"660363 [Gene Symbol: LOC660363] [Locus Tag: TcasGA2_TC015073] [Chromosome: LG6] [Map Location: ] [Description: zinc finger Y-chromosomal protein 1] [Gene Type: protein-coding] || 100142445 [Gene Symbol: LOC100142445] [Locus Tag: TcasGA2_TC015076] [Chromosome: LG6] [Map Location: ] [Description: swi5-dependent recombination DNA repair protein 1 homolog] [Gene Type: protein-coding]","LOC660363; TcasGA2_TC015073 || TcasGA2_TC015076; LOC100142445"]
[718,"NC_007421.3",3732584,"SNV","A","G","Heterozygous",7,25,28,1,3,7,0.3,40.43,10,36,4,3,2.12,0.35,0.95,"no","A/G","No",1,36.97,"XP_008194782.2:c.1108A>G","XP_008194782.2:p.Lys370Glu","LOC660363, LOC103313401","660363 , 103313401",null,"660363 [Gene Symbol: LOC660363] [Locus Tag: TcasGA2_TC015073] [Chromosome: LG6] [Map Location: ] [Description: zinc finger Y-chromosomal protein 1] [Gene Type: protein-coding] || 103313401 [Gene Symbol: LOC103313401] [Locus Tag: TcasGA2_TC015629] [Chromosome: LG6] [Map Location: ] [Description: zinc finger X-chromosomal protein] [Gene Type: protein-coding]","LOC660363; TcasGA2_TC015073 || LOC103313401; TcasGA2_TC015629"]
[719,"NC_007421.3",3751660,"SNV","G","T","Heterozygous",11,26,42.31,1,2,10,0.17,38.64,12,28,5,5,0.21,0.75,0.74,"no","G/T","No",1,76.07,"XP_008194802.1:c.[578C>A]; XP_015836437.1:c.[578C>A]","XP_008194802.1:p.[Thr193Asn]; XP_015836437.1:p.[Thr193Asn]","LOC103313408",103313408,null,"103313408 [Gene Symbol: LOC103313408] [Locus Tag: TcasGA2_TC015072] [Chromosome: LG6] [Map Location: ] [Description: zinc finger Y-chromosomal protein] [Gene Type: protein-coding]","TcasGA2_TC015072; LOC103313408"]
[720,"NC_007421.3",3860294,"SNV","G","C","Heterozygous",8,21,38.1,1,7,4,0.36,39.5,11,24,2,6,0.98,0.22,0.98,"no","C/G","No",1,57.16,"XP_001812043.1:c.536G>C","XP_001812043.1:p.Gly179Ala","LOC100142307",100142307,null,"100142307 [Gene Symbol: LOC100142307] [Locus Tag: TcasGA2_TC015640] [Chromosome: LG6] [Map Location: ] [Description: MAM and LDL-receptor class A domain-containing protein 1] [Gene Type: protein-coding]","LOC100142307; TcasGA2_TC015640"]
[721,"NC_007421.3",3861019,"SNV","G","T","Heterozygous",9,22,40.91,1,0,9,0,36.78,9,22,6,4,-1,0.31,0.47,"no","G/T","No",1,61.72,"XP_001812043.1:c.1164G>T","XP_001812043.1:p.Glu388Asp","LOC100142307",100142307,null,"100142307 [Gene Symbol: LOC100142307] [Locus Tag: TcasGA2_TC015640] [Chromosome: LG6] [Map Location: ] [Description: MAM and LDL-receptor class A domain-containing protein 1] [Gene Type: protein-coding]","LOC100142307; TcasGA2_TC015640"]
[722,"NC_007421.3",4230792,"SNV","A","G","Homozygous",20,20,100,1,14,8,0.36,38.55,22,22,9,10,null,1,1,"no","G/G","No",1,80.88,"XP_973569.2:c.1583T>C","XP_973569.2:p.Ile528Thr","LOC662377",662377,null,"662377 [Gene Symbol: LOC662377] [Locus Tag: TcasGA2_TC015049] [Chromosome: LG6] [Map Location: ] [Description: probable ATP-dependent RNA helicase DHX34] [Gene Type: protein-coding]","LOC662377; TcasGA2_TC015049"]
[723,"NC_007421.3",4364355,"SNV","T","G","Heterozygous",15,23,65.22,1,8,7,0.47,37.2,15,23,5,10,-2.39,0.76,0.77,"no","G/T","No",1,46.13,"XP_001813701.2:c.545T>G","XP_001813701.2:p.Val182Gly","LOC100141549",100141549,null,"100141549 [Gene Symbol: LOC100141549] [Locus Tag: TcasGA2_TC015661] [Chromosome: LG6] [Map Location: ] [Description: E3 ubiquitin-protein ligase FANCL] [Gene Type: protein-coding]","TcasGA2_TC015661; LOC100141549"]
[724,"NC_007421.3",4364360,"SNV","G","A","Heterozygous",13,21,61.9,1,7,6,0.46,36.69,13,21,5,9,-2.82,0.57,0.74,"no","A/G","No",1,58.08,"XP_001813701.2:c.550G>A","XP_001813701.2:p.Ala184Thr","LOC100141549",100141549,null,"100141549 [Gene Symbol: LOC100141549] [Locus Tag: TcasGA2_TC015661] [Chromosome: LG6] [Map Location: ] [Description: E3 ubiquitin-protein ligase FANCL] [Gene Type: protein-coding]","TcasGA2_TC015661; LOC100141549"]
[725,"NC_007421.3",4364415,"SNV","T","C","Homozygous",20,23,86.96,0.95,2,20,0.09,36.25,22,25,7,9,null,0.95,0.86,"no","C/C","No",1,13.02,"XP_001813701.2:c.605T>C","XP_001813701.2:p.Val202Ala","LOC100141549",100141549,null,"100141549 [Gene Symbol: LOC100141549] [Locus Tag: TcasGA2_TC015661] [Chromosome: LG6] [Map Location: ] [Description: E3 ubiquitin-protein ligase FANCL] [Gene Type: protein-coding]","TcasGA2_TC015661; LOC100141549"]
[726,"NC_007421.3",4388460,"SNV","G","C","Homozygous",21,21,100,1,7,19,0.27,35.24,26,26,7,9,null,1,1,"no","C/C","No",1,83.88,"XP_974280.1:c.[859C>G]; XP_015836416.1:c.[859C>G]","XP_974280.1:p.[Gln287Glu]; XP_015836416.1:p.[Gln287Glu]","LOC663127",663127,null,"663127 [Gene Symbol: LOC663127] [Locus Tag: TcasGA2_TC015030] [Chromosome: LG6] [Map Location: ] [Description: cytochrome P450 307B1] [Gene Type: protein-coding]","CYP307B1; LOC663127; TcasGA2_TC015030"]
[727,"NC_007421.3",4388773,"SNV","G","C","Heterozygous",8,20,40,1,5,3,0.38,35.12,8,22,4,6,-1.5,0.24,0.83,"no","C/G","No",1,59.96,"XP_974280.1:c.[546C>G]; XP_015836416.1:c.[546C>G]","XP_974280.1:p.[His182Gln]; XP_015836416.1:p.[His182Gln]","LOC663127",663127,null,"663127 [Gene Symbol: LOC663127] [Locus Tag: TcasGA2_TC015030] [Chromosome: LG6] [Map Location: ] [Description: cytochrome P450 307B1] [Gene Type: protein-coding]","CYP307B1; LOC663127; TcasGA2_TC015030"]
[728,"NC_007421.3",4424263,"SNV","T","G","Heterozygous",8,21,38.1,1,2,6,0.25,37.5,8,26,5,5,1.81,0.58,0.89,"no","G/T","No",1,59.52,"XP_015836415.1:c.4870A>C","XP_015836415.1:p.Ile1624Leu","LOC663181",663181,null,"663181 [Gene Symbol: LOC663181] [Locus Tag: TcasGA2_TC030467] [Chromosome: LG6] [Map Location: ] [Description: apolipophorins] [Gene Type: protein-coding]","LOC663181; ApoLI-II; TcasGA2_TC030467"]
[729,"NC_007421.3",4439378,"SNV","C","T","Heterozygous",19,26,73.08,1,0,19,0,38.32,19,29,6,7,-1.88,0.19,0.11,"no","C/T","No",1,31.45,"XP_015836415.1:c.286G>A","XP_015836415.1:p.Gly96Ser","LOC663181",663181,null,"663181 [Gene Symbol: LOC663181] [Locus Tag: TcasGA2_TC030467] [Chromosome: LG6] [Map Location: ] [Description: apolipophorins] [Gene Type: protein-coding]","LOC663181; ApoLI-II; TcasGA2_TC030467"]
[730,"NC_007421.3","4470277..4470278","MNV","AA","CG","Homozygous",22,22,100,1,12,16,0.43,37.53,28,28,10,21,null,1,1,"no","CG/CG","No",1,200,"XP_008194853.1:c.[740_741delTTinsCG]; XP_008194854.1:c.[740_741delTTinsCG]; XP_008194852.1:c.[938_939delTTinsCG]","XP_008194853.1:p.[Val247Ala]; XP_008194854.1:p.[Val247Ala]; XP_008194852.1:p.[Val313Ala]","LOC100142506",100142506,null,"100142506 [Gene Symbol: LOC100142506] [Locus Tag: TcasGA2_TC015028] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC100142506; TcasGA2_TC015028"]
[731,"NC_007421.3",4822551,"SNV","C","A","Heterozygous",5,20,25,0.98,5,0,0,38.4,5,20,1,4,1.92,0.26,0.54,"no","A/C","No",1,16.45,"XP_008194896.1:c.1325G>T","XP_008194896.1:p.Cys442Phe","LOC658436",658436,null,"658436 [Gene Symbol: LOC658436] [Locus Tag: TcasGA2_TC015692] [Chromosome: LG6] [Map Location: ] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC015692; LOC658436"]
[732,"NC_007421.3",4901054,"SNV","A","G","Heterozygous",8,21,38.1,1,3,5,0.38,40.5,8,22,2,6,0.58,0.27,0.83,"no","A/G","No",1,58.08,"XP_015836485.1:c.4177A>G","XP_015836485.1:p.Met1393Val","LOC657732",657732,null,"657732 [Gene Symbol: LOC657732] [Locus Tag: TcasGA2_TC014999] [Chromosome: LG6] [Map Location: ] [Description: citron Rho-interacting kinase] [Gene Type: protein-coding]","TcasGA2_TC014999; LOC657732"]
[733,"NC_007421.3",4928518,"SNV","T","G","Heterozygous",13,21,61.9,1,2,11,0.15,37.31,13,22,4,3,-2.75,0.46,0.3,"no","G/T","No",1,51.72,"XP_008194886.1:c.[14A>C]; XP_015836488.1:c.[14A>C]","XP_008194886.1:p.[Asn5Thr]; XP_015836488.1:p.[Asn5Thr]","LOC657420",657420,null,"657420 [Gene Symbol: LOC657420] [Locus Tag: TcasGA2_TC015686] [Chromosome: LG6] [Map Location: ] [Description: small G protein signaling modulator 1] [Gene Type: protein-coding]","SGSM1; LOC657420; TcasGA2_TC015686"]
[734,"NC_007421.3",4984730,"SNV","A","G","Heterozygous",16,25,64,1,11,10,0.48,38.44,21,30,5,10,-0.74,0.71,0.96,"no","A/G","No",1,58.09,"XP_015836481.1:c.[311A>G]; XP_015836480.1:c.[311A>G]","XP_015836481.1:p.[Lys104Arg]; XP_015836480.1:p.[Lys104Arg]","LOC657193, LOC107398090","657193 , 107398090",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 107398090 [Gene Symbol: LOC107398090] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 63] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || LOC107398090"]
[735,"NC_007421.3",5092148,"SNV","A","T","Homozygous",25,25,100,1,10,17,0.37,36.84,27,27,10,14,null,1,1,"no","T/T","No",1,97.57,"XP_015836498.1:c.[508T>A]; XP_015836493.1:c.[712T>A]; XP_015836491.1:c.[712T>A]; XP_015836496.1:c.[592T>A]; XP_015836497.1:c.[592T>A]; XP_015836492.1:c.[712T>A]; XP_015836495.1:c.[595T>A]; XP_015836494.1:c.[712T>A]","XP_015836498.1:p.[Tyr170Asn]; XP_015836493.1:p.[Tyr238Asn]; XP_015836491.1:p.[Tyr238Asn]; XP_015836496.1:p.[Tyr198Asn]; XP_015836497.1:p.[Tyr198Asn]; XP_015836492.1:p.[Tyr238Asn]; XP_015836495.1:p.[Tyr199Asn]; XP_015836494.1:p.[Tyr238Asn]","LOC655777",655777,null,"655777 [Gene Symbol: LOC655777] [Locus Tag: TcasGA2_TC015678] [Chromosome: LG6] [Map Location: ] [Description: cyclic nucleotide-gated cation channel beta-1] [Gene Type: protein-coding]","LOC655777; TcasGA2_TC015678"]
[736,"NC_007421.3",5185606,"SNV","G","T","Heterozygous",7,28,25,0.99,7,0,0,39.29,7,29,1,5,0.69,0.09,0.44,"no","G/T","No",1,19.45,"XP_966906.2:c.558C>A","XP_966906.2:p.Tyr186*","LOC655284",655284,null,"655284 [Gene Symbol: LOC655284] [Locus Tag: TcasGA2_TC015672] [Chromosome: LG6] [Map Location: ] [Description: peptidylprolyl isomerase domain and WD repeat-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC015672; LOC655284"]
[737,"NC_007421.3","5189881..5189882","MNV","CC","AA","Heterozygous",15,22,68.18,1,2,13,0.13,38.36,15,22,4,9,0.84,0.35,0.97,"no","complex","No",1,200,"XP_008194864.1:c.685_686delCCinsAA","XP_008194864.1:p.Pro229Asn","LOC655209",655209,null,"655209 [Gene Symbol: LOC655209] [Locus Tag: TcasGA2_TC015021] [Chromosome: LG6] [Map Location: ] [Description: golgin subfamily A member 4] [Gene Type: protein-coding]","LOC655209; TcasGA2_TC015021"]
[738,"NC_007421.3",5251470,"SNV","A","C","Heterozygous",10,22,45.45,1,2,8,0.2,39.6,10,29,6,5,0.49,0.88,0.82,"no","A/C","No",1,82.56,"XP_015836472.1:c.[3251A>C]; XP_015836471.1:c.[3491A>C]; XP_015836473.1:c.[2960A>C]","XP_015836472.1:p.[Tyr1084Ser]; XP_015836471.1:p.[Tyr1164Ser]; XP_015836473.1:p.[Tyr987Ser]","LOC654936",654936,null,"654936 [Gene Symbol: LOC654936] [Locus Tag: TcasGA2_TC015023] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 136] [Gene Type: protein-coding]","TcasGA2_TC015023; LOC654936"]
[739,"NC_007421.3",5251488,"SNV","C","T","Heterozygous",11,22,50,1,7,10,0.41,40.09,17,28,8,7,0.89,0.93,0.99,"no","C/T","No",1,89.66,"XP_015836472.1:c.[3269C>T]; XP_015836473.1:c.[2978C>T]; XP_015836471.1:c.[3509C>T]","XP_015836472.1:p.[Ser1090Leu]; XP_015836473.1:p.[Ser993Leu]; XP_015836471.1:p.[Ser1170Leu]","LOC654936",654936,null,"654936 [Gene Symbol: LOC654936] [Locus Tag: TcasGA2_TC015023] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 136] [Gene Type: protein-coding]","TcasGA2_TC015023; LOC654936"]
[740,"NC_007421.3","5251499..5251501","MNV","AGC","CAT","Heterozygous",11,23,47.83,1,2,9,0.18,38.56,11,26,8,6,0.28,0.42,0.96,"no","complex","No",1,200,"XP_015836472.1:c.[3280_3282delAGCinsCAT]; XP_015836471.1:c.[3520_3522delAGCinsCAT]; XP_015836473.1:c.[2989_2991delAGCinsCAT]","XP_015836472.1:p.[Ser1094His]; XP_015836471.1:p.[Ser1174His]; XP_015836473.1:p.[Ser997His]","LOC654936",654936,null,"654936 [Gene Symbol: LOC654936] [Locus Tag: TcasGA2_TC015023] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 136] [Gene Type: protein-coding]","TcasGA2_TC015023; LOC654936"]
[741,"NC_007421.3",5483309,"SNV","A","G","Homozygous",21,22,95.45,1,0,21,0,37.67,21,22,3,5,null,1,1,"no","G/G","No",1,56.42,"XP_008191954.1:c.[1040T>C]; XP_008191952.1:c.[1109T>C]; XP_008191953.1:c.[1109T>C]; XP_015836564.1:c.[1040T>C]","XP_008191954.1:p.[Val347Ala]; XP_008191952.1:p.[Val370Ala]; XP_008191953.1:p.[Val370Ala]; XP_015836564.1:p.[Val347Ala]","LOC659527",659527,null,"659527 [Gene Symbol: LOC659527] [Locus Tag: TcasGA2_TC030641] [Chromosome: LG6] [Map Location: ] [Description: actin cytoskeleton-regulatory complex protein PAN1] [Gene Type: protein-coding]","TcasGA2_TC030641; LOC659527"]
[742,"NC_007421.3",5498706,"SNV","G","C","Heterozygous",5,23,21.74,0.95,0,5,0,40.2,5,23,1,3,2.42,0.02,0.08,"no","C/G","No",1,13.44,"XP_008191989.1:c.1045G>C","XP_008191989.1:p.Glu349Gln","LOC659527, LOC659589","659527 , 659589",null,"659527 [Gene Symbol: LOC659527] [Locus Tag: TcasGA2_TC030641] [Chromosome: LG6] [Map Location: ] [Description: actin cytoskeleton-regulatory complex protein PAN1] [Gene Type: protein-coding] || 659589 [Gene Symbol: LOC659589] [Locus Tag: TcasGA2_TC015701] [Chromosome: LG6] [Map Location: ] [Description: myb-binding protein 1A] [Gene Type: protein-coding]","TcasGA2_TC030641; LOC659527 || TcasGA2_TC015701; LOC659589"]
[743,"NC_007421.3",5498709,"SNV","T","G","Heterozygous",5,21,23.81,0.99,0,5,0,39.6,5,21,1,3,2.19,0.02,0.07,"no","G/T","No",1,21.21,"XP_008191989.1:c.1048T>G","XP_008191989.1:p.Phe350Val","LOC659527, LOC659589","659527 , 659589",null,"659527 [Gene Symbol: LOC659527] [Locus Tag: TcasGA2_TC030641] [Chromosome: LG6] [Map Location: ] [Description: actin cytoskeleton-regulatory complex protein PAN1] [Gene Type: protein-coding] || 659589 [Gene Symbol: LOC659589] [Locus Tag: TcasGA2_TC015701] [Chromosome: LG6] [Map Location: ] [Description: myb-binding protein 1A] [Gene Type: protein-coding]","TcasGA2_TC030641; LOC659527 || TcasGA2_TC015701; LOC659589"]
[744,"NC_007421.3",5652069,"SNV","T","A","Heterozygous",5,23,21.74,0.95,3,3,0.5,36.2,6,31,5,4,-0.26,0.54,1,"no","A/T","No",1,12.84,"XP_015836607.1:c.469T>A","XP_015836607.1:p.Ser157Thr","LOC659861",659861,null,"659861 [Gene Symbol: LOC659861] [Locus Tag: TcasGA2_TC015703] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC659861] [Gene Type: protein-coding]","LOC659861; TcasGA2_TC015703"]
[745,"NC_007421.3",5731247,"SNV","T","A","Homozygous",18,20,90,0.99,6,14,0.3,38.89,20,22,9,13,null,0.98,1,"no","A/A","No",1,19.42,"XP_008191971.1:c.[50-24946A>T]; XP_972430.2:c.[1526T>A]","XP_972430.2:p.Leu509Gln","LOC660777, LOC661158","660777 , 661158",null,"660777 [Gene Symbol: LOC660777] [Locus Tag: TcasGA2_TC014971] [Chromosome: LG6] [Map Location: ] [Description: flotillin-2] [Gene Type: protein-coding] || 661158 [Gene Symbol: LOC661158] [Locus Tag: TcasGA2_TC015717] [Chromosome: LG6] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC660777; TcasGA2_TC014971 || LOC661158; TcasGA2_TC015717"]
[746,"NC_007421.3",5775038,"SNV","G","A","Heterozygous",6,21,28.57,1,1,5,0.17,39.67,6,26,2,2,3.15,0.06,0.87,"no","A/G","No",1,30.99,"XP_008191961.1:c.[1744G>A]; XP_015836549.1:c.[1744G>A]; XP_008191971.1:c.[49+2963C>T]","XP_008191961.1:p.[Val582Ile]; XP_015836549.1:p.[Val582Ile]","LOC660777, LOC661553","660777 , 661553",null,"660777 [Gene Symbol: LOC660777] [Locus Tag: TcasGA2_TC014971] [Chromosome: LG6] [Map Location: ] [Description: flotillin-2] [Gene Type: protein-coding] || 661553 [Gene Symbol: LOC661553] [Locus Tag: TcasGA2_TC015725] [Chromosome: LG6] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC660777; TcasGA2_TC014971 || TcasGA2_TC015725; LOC661553"]
[747,"NC_007421.3",5786117,"SNV","C","T","Heterozygous",8,24,33.33,1,7,1,0.12,35.38,8,24,5,4,-2.48,0.03,0.03,"no","C/T","No",1,48.2,"XP_972927.1:c.85G>A","XP_972927.1:p.Glu29Lys","LOC661686",661686,null,"661686 [Gene Symbol: LOC661686] [Locus Tag: TcasGA2_TC033431] [Chromosome: LG6] [Map Location: ] [Description: nuclear speckle splicing regulatory protein 1] [Gene Type: protein-coding]","LOC661686; TcasGA2_TC033431"]
[748,"NC_007421.3",5793484,"SNV","T","C","Homozygous",21,21,100,1,12,18,0.4,37.38,30,30,11,10,null,1,1,"no","C/C","No",1,83.89,"XP_015836553.1:c.[533A>G]; XP_015836554.1:c.[428A>G]; XP_001812453.2:c.[428A>G]","XP_015836553.1:p.[Tyr178Cys]; XP_015836554.1:p.[Tyr143Cys]; XP_001812453.2:p.[Tyr143Cys]","LOC100141600",100141600,null,"100141600 [Gene Symbol: LOC100141600] [Locus Tag: TcasGA2_TC014967] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100141600] [Gene Type: protein-coding]","TcasGA2_TC014967; LOC100141600"]
[749,"NC_007421.3",5793490,"SNV","G","A","Homozygous",23,23,100,1,9,20,0.31,39.78,29,29,12,11,null,1,1,"no","A/A","No",1,91.51,"XP_015836553.1:c.[527C>T]; XP_015836554.1:c.[422C>T]; XP_001812453.2:c.[422C>T]","XP_015836553.1:p.[Thr176Ile]; XP_015836554.1:p.[Thr141Ile]; XP_001812453.2:p.[Thr141Ile]","LOC100141600",100141600,null,"100141600 [Gene Symbol: LOC100141600] [Locus Tag: TcasGA2_TC014967] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100141600] [Gene Type: protein-coding]","TcasGA2_TC014967; LOC100141600"]
[750,"NC_007421.3",5814716,"SNV","C","G","Homozygous",27,27,100,1,21,17,0.45,36.44,38,38,11,17,null,1,1,"no","G/G","No",1,101.94,"XP_008191976.1:c.2279C>G","XP_008191976.1:p.Ala760Gly","LOC103312130",103312130,null,"103312130 [Gene Symbol: LOC103312130] [Locus Tag: TcasGA2_TC015731] [Chromosome: LG6] [Map Location: ] [Description: probable ATP-dependent RNA helicase kurz] [Gene Type: protein-coding]","TcasGA2_TC015731; LOC103312130"]
[751,"NC_007421.3",5815263,"SNV","C","G","Heterozygous",5,20,25,0.99,0,5,0,39.2,5,20,3,3,2.23,0.19,0.72,"no","C/G","No",1,21.37,"XP_008191976.1:c.2826C>G","XP_008191976.1:p.Asn942Lys","LOC103312130",103312130,null,"103312130 [Gene Symbol: LOC103312130] [Locus Tag: TcasGA2_TC015731] [Chromosome: LG6] [Map Location: ] [Description: probable ATP-dependent RNA helicase kurz] [Gene Type: protein-coding]","TcasGA2_TC015731; LOC103312130"]
[752,"NC_007421.3",5823557,"SNV","A","G","Homozygous",21,21,100,1,8,21,0.28,38.14,29,29,10,12,null,1,1,"no","G/G","No",1,83.89,"XP_973267.1:c.760A>G","XP_973267.1:p.Ser254Gly","LOC662051",662051,null,"662051 [Gene Symbol: LOC662051] [Locus Tag: TcasGA2_TC015732] [Chromosome: LG6] [Map Location: ] [Description: thioredoxin-related transmembrane protein 2 homolog] [Gene Type: protein-coding]","TcasGA2_TC015732; LOC662051"]
[753,"NC_007421.3",7441919,"SNV","A","G","Homozygous",21,21,100,1,16,11,0.41,36.14,27,27,9,15,null,1,1,"no","G/G","No",1,83.88,"XP_008194927.2:c.[401A>G]; XP_015836527.1:c.[155A>G]; XP_015836525.1:c.[155A>G]; XP_015836526.1:c.[155A>G]","XP_008194927.2:p.[Asp134Gly]; XP_015836527.1:p.[Asp52Gly]; XP_015836525.1:p.[Asp52Gly]; XP_015836526.1:p.[Asp52Gly]","LOC656109",656109,null,"656109 [Gene Symbol: LOC656109] [Locus Tag: TcasGA2_TC015753] [Chromosome: LG6] [Map Location: ] [Description: putative fatty acyl-CoA reductase CG5065] [Gene Type: protein-coding]","TcasGA2_TC015753; LOC656109"]
[754,"NC_007421.3",7486457,"SNV","A","G","Homozygous",20,20,100,1,20,0,0,38.9,20,20,7,12,null,1,1,"no","G/G","No",1,80.88,"XP_015836505.1:c.4784T>C","XP_015836505.1:p.Phe1595Ser","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[755,"NC_007421.3",7488946,"SNV","G","A","Homozygous",26,26,100,1,8,18,0.31,36.46,26,26,9,18,null,1,1,"no","A/A","No",1,100.54,"XP_015836505.1:c.2390C>T","XP_015836505.1:p.Thr797Ile","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[756,"NC_007421.3",7501715,"SNV","A","T","Homozygous",21,21,100,1,3,20,0.13,37.29,23,23,7,12,null,1,1,"no","T/T","No",1,85.53,"XP_008194930.1:c.[643T>A]; XP_008194931.1:c.[2207+557A>T]","XP_008194930.1:p.Leu215Ile","LOC656861, LOC103313438","656861 , 103313438",null,"656861 [Gene Symbol: LOC656861] [Locus Tag: TcasGA2_TC015758] [Chromosome: LG6] [Map Location: ] [Description: syndetin] [Gene Type: protein-coding] || 103313438 [Gene Symbol: LOC103313438] [Locus Tag: TcasGA2_TC014947] [Chromosome: LG6] [Map Location: ] [Description: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6] [Gene Type: protein-coding]","TcasGA2_TC015758; LOC656861 || LOC103313438; TcasGA2_TC014947"]
[757,"NC_007421.3",7581106,"SNV","C","A","Homozygous",27,27,100,1,17,10,0.37,37.81,27,27,8,11,null,1,1,"no","A/A","No",1,103.55,"XP_008194915.1:c.2278G>T","XP_008194915.1:p.Ala760Ser","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[758,"NC_007421.3",7582594,"SNV","T","C","Homozygous",20,20,100,1,14,12,0.46,35.25,26,26,9,9,null,1,1,"no","C/C","No",1,80.88,"XP_008194915.1:c.790A>G","XP_008194915.1:p.Ile264Val","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[759,"NC_007421.3",7586066,"SNV","A","G","Homozygous",35,35,100,1,17,18,0.49,37.94,35,35,9,18,null,1,1,"no","G/G","No",1,126.03,"XP_008194916.1:c.[2474A>G]; XP_015836513.1:c.[2477A>G]","XP_008194916.1:p.[Lys825Arg]; XP_015836513.1:p.[Lys826Arg]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[760,"NC_007421.3","7587310^7587311","Insertion","-","AGG","Homozygous",20,20,100,1,10,11,0.48,37.93,21,21,8,14,null,1,1,"no","AGG/AGG","No",1,200,"XP_008194916.1:c.[3718_3719insAGG]; XP_015836513.1:c.[3721_3722insAGG]","XP_008194916.1:p.[Glu1241_Pro1242insGlu]; XP_015836513.1:p.[Glu1242_Pro1243insGlu]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[761,"NC_007421.3",7591108,"SNV","A","C","Homozygous",23,26,88.46,1,12,16,0.43,36.96,28,31,11,16,null,1,1,"no","C/C","No",1,25.9,"XP_015836513.1:c.[4513A>C]; XP_008194916.1:c.[4510A>C]","XP_015836513.1:p.[Asn1505His]; XP_008194916.1:p.[Asn1504His]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[762,"NC_007421.3",7591262,"SNV","C","T","Heterozygous",14,28,50,1,6,8,0.43,38,14,32,6,7,1.19,0.68,0.64,"no","C/T","No",1,111.18,"XP_008194916.1:c.[4664C>T]; XP_015836513.1:c.[4667C>T]","XP_008194916.1:p.[Ser1555Leu]; XP_015836513.1:p.[Ser1556Leu]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[763,"NC_007421.3",7591296,"SNV","G","C","Homozygous",27,27,100,1,15,14,0.48,38.59,29,29,13,16,null,1,1,"no","C/C","No",1,101.95,"XP_008194916.1:c.[4698G>C]; XP_015836513.1:c.[4701G>C]","XP_008194916.1:p.[Glu1566Asp]; XP_015836513.1:p.[Glu1567Asp]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[764,"NC_007421.3",7894014,"SNV","T","C","Homozygous",28,28,100,1,16,18,0.47,38,34,34,11,17,null,1,1,"no","C/C","No",1,104.95,"XP_008194945.1:c.[2891A>G]; XP_008194946.1:c.[2927A>G]; XP_008194944.1:c.[2927A>G]; XP_969785.1:c.[2873A>G]","XP_008194945.1:p.[His964Arg]; XP_008194946.1:p.[His976Arg]; XP_008194944.1:p.[His976Arg]; XP_969785.1:p.[His958Arg]","LOC658290",658290,null,"658290 [Gene Symbol: LOC658290] [Locus Tag: TcasGA2_TC014935] [Chromosome: LG6] [Map Location: ] [Description: phosphatidylinositol 4-kinase alpha] [Gene Type: protein-coding]","LOC658290; TcasGA2_TC014935"]
[765,"NC_007421.3","8031936^8031937","Insertion","-","T","Heterozygous",13,36,36.11,1,11,4,0.27,38.15,15,44,5,10,0.18,0.34,0.71,"no","-/T","No",1,81.06,"XP_015836506.1:c.431_432insA","XP_015836506.1:p.Asp145fs","LOC107398093",107398093,null,"107398093 [Gene Symbol: LOC107398093] [Locus Tag: TcasGA2_TC033445] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398093] [Gene Type: protein-coding]","TcasGA2_TC033445; LOC107398093"]
[766,"NC_007421.3",8032007,"SNV","G","A","Heterozygous",17,31,54.84,1,7,14,0.33,35.41,21,36,7,11,-1.47,0.48,1,"no","A/G","No",1,106.78,"XP_015836506.1:c.361C>T","XP_015836506.1:p.Pro121Ser","LOC107398093",107398093,null,"107398093 [Gene Symbol: LOC107398093] [Locus Tag: TcasGA2_TC033445] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398093] [Gene Type: protein-coding]","TcasGA2_TC033445; LOC107398093"]
[767,"NC_007421.3",8042540,"SNV","C","T","Heterozygous",6,25,24,0.99,6,3,0.33,38,9,32,3,5,2.32,0.41,0.72,"no","C/T","No",1,19.89,"XP_971286.2:c.[644G>A]; XP_015836569.1:c.[686G>A]","XP_971286.2:p.[Ser215Asn]; XP_015836569.1:p.[Ser229Asn]","LOC659927",659927,null,"659927 [Gene Symbol: LOC659927] [Locus Tag: TcasGA2_TC014921] [Chromosome: LG6] [Map Location: ] [Description: protein mothers against dpp] [Gene Type: protein-coding]","LOC659927; TcasGA2_TC014921"]
[768,"NC_007421.3",8829886,"SNV","C","A","Homozygous",20,23,86.96,0.9,20,3,0.13,36.55,23,26,8,10,null,0.83,0.8,"no","A/A","No",1,10.08,"XP_967434.1:c.622C>A","XP_967434.1:p.Gln208Lys","LOC655779",655779,null,"655779 [Gene Symbol: LOC655779] [Locus Tag: TcasGA2_TC015811] [Chromosome: LG6] [Map Location: ] [Description: prostatic acid phosphatase] [Gene Type: protein-coding]","LOC655779; TcasGA2_TC015811"]
[769,"NC_007421.3",8929325,"SNV","A","G","Homozygous",22,22,100,1,18,7,0.28,35.05,25,25,8,14,null,1,1,"no","G/G","No",1,83.89,"XP_008195008.1:c.[2768A>G]; XP_008195010.1:c.[2588A>G]; XP_008195006.1:c.[2870A>G]; XP_008195007.1:c.[2792A>G]; XP_968455.2:c.[2798A>G]; XP_008195005.1:c.[2921A>G]","XP_008195008.1:p.[Lys923Arg]; XP_008195010.1:p.[Lys863Arg]; XP_008195006.1:p.[Lys957Arg]; XP_008195007.1:p.[Lys931Arg]; XP_968455.2:p.[Lys933Arg]; XP_008195005.1:p.[Lys974Arg]","LOC656862",656862,null,"656862 [Gene Symbol: LOC656862] [Locus Tag: TcasGA2_TC015817] [Chromosome: LG6] [Map Location: ] [Description: copper-transporting ATPase 1] [Gene Type: protein-coding]","TcasGA2_TC015817; LOC656862"]
[770,"NC_007421.3",9008638,"SNV","C","A","Homozygous",24,24,100,1,12,12,0.5,38.33,24,24,8,14,null,1,1,"no","A/A","No",1,94.52,"XP_969339.3:c.642C>A","XP_969339.3:p.Asp214Glu","LOC657811",657811,null,"657811 [Gene Symbol: LOC657811] [Locus Tag: TcasGA2_TC015826] [Chromosome: LG6] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD1B] [Gene Type: protein-coding]","TcasGA2_TC015826; LOC657811"]
[771,"NC_007421.3",9021834,"SNV","G","A","Homozygous",22,22,100,1,13,17,0.43,36.36,30,30,7,13,null,1,1,"no","A/A","No",1,88.51,"XP_969485.1:c.319G>A","XP_969485.1:p.Val107Ile","LOC657973",657973,null,"657973 [Gene Symbol: LOC657973] [Locus Tag: TcasGA2_TC015827] [Chromosome: LG6] [Map Location: ] [Description: WASH complex subunit FAM21A] [Gene Type: protein-coding]","LOC657973; TcasGA2_TC015827"]
[772,"NC_007421.3",9024384,"SNV","A","G","Homozygous",22,22,100,1,6,17,0.26,39.23,23,23,7,10,null,1,1,"no","G/G","No",1,86.9,"XP_969485.1:c.2533A>G","XP_969485.1:p.Lys845Glu","LOC657973",657973,null,"657973 [Gene Symbol: LOC657973] [Locus Tag: TcasGA2_TC015827] [Chromosome: LG6] [Map Location: ] [Description: WASH complex subunit FAM21A] [Gene Type: protein-coding]","LOC657973; TcasGA2_TC015827"]
[773,"NC_007421.3",9163373,"SNV","G","C","Homozygous",20,20,100,1,13,16,0.45,37.55,29,29,9,10,null,1,1,"no","C/C","No",1,80.88,"XP_008194975.1:c.440G>C","XP_008194975.1:p.Gly147Ala","LOC100142233",100142233,null,"100142233 [Gene Symbol: LOC100142233] [Locus Tag: TcasGA2_TC015835] [Chromosome: LG6] [Map Location: ] [Description: dynein assembly factor 1, axonemal] [Gene Type: protein-coding]","LOC100142233; TcasGA2_TC015835"]
[774,"NC_007421.3",9222165,"SNV","A","C","Homozygous",20,20,100,1,15,6,0.29,37.3,21,21,11,14,null,1,1,"no","C/C","No",1,80.88,"XP_008195034.1:c.546A>C","XP_008195034.1:p.Lys182Asn","LOC659101, LOC103313474","659101 , 103313474",null,"659101 [Gene Symbol: LOC659101] [Locus Tag: TcasGA2_TC014880] [Chromosome: LG6] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding] || 103313474 [Gene Symbol: LOC103313474] [Locus Tag: TcasGA2_TC033464] [Chromosome: LG6] [Map Location: ] [Description: protein takeout-like] [Gene Type: protein-coding]","LOC659101; TcasGA2_TC014880 || LOC103313474; TcasGA2_TC033464"]
[775,"NC_007421.3",9400595,"SNV","A","T","Homozygous",32,32,100,1,20,18,0.47,38.16,38,38,10,19,null,1,1,"no","T/T","No",1,118.62,"XP_015836623.1:c.[601T>A]; XP_015836619.1:c.[688T>A]; XP_008195042.1:c.[688T>A]; XP_015836621.1:c.[688T>A]; XP_015836622.1:c.[688T>A]; XP_015836626.1:c.[688T>A]; XP_015836625.1:c.[688T>A]; XP_015836624.1:c.[688T>A]; XP_015836620.1:c.[688T>A]","XP_015836623.1:p.[Ser201Thr]; XP_015836619.1:p.[Ser230Thr]; XP_008195042.1:p.[Ser230Thr]; XP_015836621.1:p.[Ser230Thr]; XP_015836622.1:p.[Ser230Thr]; XP_015836626.1:p.[Ser230Thr]; XP_015836625.1:p.[Ser230Thr]; XP_015836624.1:p.[Ser230Thr]; XP_015836620.1:p.[Ser230Thr]","LOC660242",660242,null,"660242 [Gene Symbol: LOC660242] [Locus Tag: TcasGA2_TC014869] [Chromosome: LG6] [Map Location: ] [Description: RIMS-binding protein 2] [Gene Type: protein-coding]","LOC660242; TcasGA2_TC014869"]
[776,"NC_007421.3",9708895,"SNV","G","A","Heterozygous",15,24,62.5,1,6,11,0.35,38.87,17,27,8,9,1.85,0.84,0.92,"no","A/G","No",1,62.52,"XP_008195056.1:c.[3125G>A]; XP_008195057.1:c.[3125G>A]","XP_008195056.1:p.[Ser1042Asn]; XP_008195057.1:p.[Ser1042Asn]","LOC661331",661331,null,"661331 [Gene Symbol: LOC661331] [Locus Tag: TcasGA2_TC015859] [Chromosome: LG6] [Map Location: ] [Description: ATP-binding cassette sub-family A member 5] [Gene Type: protein-coding]","LOC661331; TcasGA2_TC015859"]
[777,"NC_007421.3","9876565^9876566","Insertion","-","A","Heterozygous",6,22,27.27,1,6,0,0,39.67,6,22,2,6,0.11,0.14,0.37,"no","-/A","No",1,31.04,"XP_015836605.1:c.187_188insT","XP_015836605.1:p.Gly63fs","LOC107398117",107398117,null,"107398117 [Gene Symbol: LOC107398117] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: putative glycine-rich cell wall structural protein 1] [Gene Type: protein-coding]","LOC107398117"]
[778,"NC_007421.3","9876570..9876571","MNV","GT","TC","Heterozygous",6,21,28.57,1,5,1,0.17,38.67,6,21,3,6,0.25,0.42,0.73,"no","complex","No",1,200,"XP_015836605.1:c.182_183delACinsGA","XP_015836605.1:p.Asp61Gly","LOC107398117",107398117,null,"107398117 [Gene Symbol: LOC107398117] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: putative glycine-rich cell wall structural protein 1] [Gene Type: protein-coding]","LOC107398117"]
[779,"NC_007421.3","9876572^9876573","Insertion","-","T","Heterozygous",6,20,30,1,5,1,0.17,38.67,6,20,3,6,-0.66,0.49,0.69,"no","-/T","No",1,38.86,"XP_015836605.1:c.180_181insA","XP_015836605.1:p.Asp61fs","LOC107398117",107398117,null,"107398117 [Gene Symbol: LOC107398117] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: putative glycine-rich cell wall structural protein 1] [Gene Type: protein-coding]","LOC107398117"]
[780,"NC_007421.3",9876722,"SNV","C","T","Homozygous",17,20,85,0.66,0,17,0,39.18,17,21,5,12,null,0.82,0.7,"no","T/T","No",1,4.71,"XP_015836605.1:c.31G>A","XP_015836605.1:p.Gly11Ser","LOC107398117",107398117,null,"107398117 [Gene Symbol: LOC107398117] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: putative glycine-rich cell wall structural protein 1] [Gene Type: protein-coding]","LOC107398117"]
[781,"NC_007422.5",390487,"SNV","G","A","Homozygous",19,20,95,1,8,11,0.42,38.63,19,20,8,13,null,0.94,1,"no","A/A","No",1,49.09,"XP_015836732.1:c.149C>T","XP_015836732.1:p.Pro50Leu","LOC103313525",103313525,null,"103313525 [Gene Symbol: LOC103313525] [Locus Tag: TcasGA2_TC033547] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313525] [Gene Type: protein-coding]","LOC103313525; TcasGA2_TC033547"]
[782,"NC_007422.5",604142,"SNV","T","C","Homozygous",27,27,100,1,14,21,0.4,36.78,35,35,10,15,null,1,1,"no","C/C","No",1,101.94,"XP_973505.1:c.748A>G","XP_973505.1:p.Met250Val","LOC662306",662306,null,"662306 [Gene Symbol: LOC662306] [Locus Tag: TcasGA2_TC009472] [Chromosome: LG7] [Map Location: ] [Description: tRNA (cytosine(34)-C(5))-methyltransferase] [Gene Type: protein-coding]","LOC662306; TcasGA2_TC009472"]
[783,"NC_007422.5",1133134,"SNV","G","A","Homozygous",25,25,100,1,20,8,0.29,37.92,28,28,10,16,null,1,1,"no","A/A","No",1,97.53,"XP_008195127.1:c.[436G>A]; XP_015836709.1:c.[436G>A]; XP_008195128.1:c.[879+1306C>T]","XP_008195127.1:p.[Val146Met]; XP_015836709.1:p.[Val146Met]","LOC659993, LOC103313496","659993 , 103313496",null,"659993 [Gene Symbol: LOC659993] [Locus Tag: TcasGA2_TC033519] [Chromosome: LG7] [Map Location: ] [Description: intron-binding protein aquarius] [Gene Type: protein-coding] || 103313496 [Gene Symbol: LOC103313496] [Locus Tag: TcasGA2_TC009370] [Chromosome: LG7] [Map Location: ] [Description: probable G-protein coupled receptor Mth-like 5] [Gene Type: protein-coding]","LOC659993; AQR; TcasGA2_TC033519 || TcasGA2_TC009370; LOC103313496"]
[784,"NC_007422.5",1195776,"SNV","C","G","Homozygous",25,25,100,1,19,6,0.24,39.32,25,25,8,13,null,1,1,"no","G/G","No",1,95.92,"XP_970529.1:c.820G>C","XP_970529.1:p.Ala274Pro","LOC659104",659104,null,"659104 [Gene Symbol: LOC659104] [Locus Tag: TcasGA2_TC009440] [Chromosome: LG7] [Map Location: ] [Description: vanin-like protein 2] [Gene Type: protein-coding]","TcasGA2_TC009440; LOC659104"]
[785,"NC_007422.5",1195782,"SNV","T","C","Homozygous",23,23,100,1,19,4,0.17,38.7,23,23,7,12,null,1,1,"no","C/C","No",1,89.91,"XP_970529.1:c.814A>G","XP_970529.1:p.Ile272Val","LOC659104",659104,null,"659104 [Gene Symbol: LOC659104] [Locus Tag: TcasGA2_TC009440] [Chromosome: LG7] [Map Location: ] [Description: vanin-like protein 2] [Gene Type: protein-coding]","TcasGA2_TC009440; LOC659104"]
[786,"NC_007422.5",1300026,"SNV","T","A","Homozygous",20,20,100,1,14,9,0.39,37.65,23,23,9,16,null,1,1,"no","A/A","No",1,82.49,"XP_008195115.1:c.407A>T","XP_008195115.1:p.Tyr136Phe","LOC658513",658513,null,"658513 [Gene Symbol: LOC658513] [Locus Tag: TcasGA2_TC009435] [Chromosome: LG7] [Map Location: ] [Description: transmembrane protein 214-B] [Gene Type: protein-coding]","LOC658513; TcasGA2_TC009435"]
[787,"NC_007422.5",1352271,"SNV","T","C","Homozygous",21,21,100,1,16,13,0.45,38.48,29,29,11,12,null,1,1,"no","C/C","No",1,80.88,"XP_008195104.1:c.1622A>G","XP_008195104.1:p.Asn541Ser","LOC657736",657736,null,"657736 [Gene Symbol: LOC657736] [Locus Tag: TcasGA2_TC033516] [Chromosome: LG7] [Map Location: ] [Description: ATP-binding cassette sub-family A member 2] [Gene Type: protein-coding]","LOC657736; TcasGA2_TC033516"]
[788,"NC_007422.5",1460657,"SNV","G","T","Heterozygous",5,20,25,0.98,2,5,0.29,40.2,7,26,4,2,2.57,0.4,1,"no","G/T","No",1,16.3,"XP_008195092.1:c.[347C>A]; XP_008195093.1:c.[347C>A]","XP_008195092.1:p.[Thr116Asn]; XP_008195093.1:p.[Thr116Asn]","LOC656611",656611,null,"656611 [Gene Symbol: LOC656611] [Locus Tag: TcasGA2_TC033514] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC656611] [Gene Type: protein-coding]","TcasGA2_TC033514; LOC656611"]
[789,"NC_007422.5",1486936,"Deletion","C","-","Homozygous",29,30,96.67,1,29,12,0.29,37.62,41,42,11,14,null,1,1,"no","-/-","No",1,79.08,"XP_008195241.1:c.959delG","XP_008195241.1:p.Arg320fs","LOC103313535",103313535,null,"103313535 [Gene Symbol: LOC103313535] [Locus Tag: TcasGA2_TC030158] [Chromosome: LG7] [Map Location: ] [Description: gustatory receptor 60] [Gene Type: protein-coding]","LOC103313535; TcasGA2_TC030158; TcGr60"]
[790,"NC_007422.5",1486994,"SNV","C","T","Homozygous",28,28,100,1,16,18,0.47,37.79,34,34,13,14,null,1,1,"no","T/T","No",1,106.59,"XP_008195241.1:c.901G>A","XP_008195241.1:p.Val301Ile","LOC103313535",103313535,null,"103313535 [Gene Symbol: LOC103313535] [Locus Tag: TcasGA2_TC030158] [Chromosome: LG7] [Map Location: ] [Description: gustatory receptor 60] [Gene Type: protein-coding]","LOC103313535; TcasGA2_TC030158; TcGr60"]
[791,"NC_007422.5",1501938,"SNV","A","G","Homozygous",21,21,100,1,6,15,0.29,37.29,21,21,8,10,null,1,1,"no","G/G","No",1,83.89,"XP_015836650.1:c.253T>C","XP_015836650.1:p.Phe85Leu","LOC655692",655692,null,"655692 [Gene Symbol: LOC655692] [Locus Tag: TcasGA2_TC009418] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655692] [Gene Type: protein-coding]","LOC655692; TcasGA2_TC009418"]
[792,"NC_007422.5",1501940,"SNV","G","A","Homozygous",21,21,100,1,6,15,0.29,37.1,21,21,8,10,null,1,1,"no","A/A","No",1,85.5,"XP_015836650.1:c.251C>T","XP_015836650.1:p.Ala84Val","LOC655692",655692,null,"655692 [Gene Symbol: LOC655692] [Locus Tag: TcasGA2_TC009418] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655692] [Gene Type: protein-coding]","LOC655692; TcasGA2_TC009418"]
[793,"NC_007422.5",1789542,"SNV","A","G","Homozygous",24,24,100,1,17,13,0.43,38.17,30,30,4,16,null,1,1,"no","G/G","No",1,92.92,"XP_008195268.1:c.[1898T>C]; XP_008195266.1:c.[1910T>C]","XP_008195268.1:p.[Val633Ala]; XP_008195266.1:p.[Val637Ala]","LOC103313545",103313545,null,"103313545 [Gene Symbol: LOC103313545] [Locus Tag: TcasGA2_TC009296] [Chromosome: LG7] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC009296; LOC103313545"]
[794,"NC_007422.5",1790427,"SNV","C","A","Heterozygous",5,21,23.81,0.96,0,5,0,39.2,5,23,1,2,1.82,0.09,0.38,"no","A/C","No",1,13.72,"XP_008195268.1:c.[1687G>T]; XP_008195266.1:c.[1699G>T]","XP_008195268.1:p.[Val563Leu]; XP_008195266.1:p.[Val567Leu]","LOC103313545",103313545,null,"103313545 [Gene Symbol: LOC103313545] [Locus Tag: TcasGA2_TC009296] [Chromosome: LG7] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC009296; LOC103313545"]
[795,"NC_007422.5",1813984,"SNV","C","T","Heterozygous",12,23,52.17,1,9,5,0.36,37.42,14,25,3,8,-0.83,0.79,0.97,"no","C/T","No",1,90.54,"XP_968071.1:c.2822G>A","XP_968071.1:p.Arg941Lys","LOC656445",656445,null,"656445 [Gene Symbol: LOC656445] [Locus Tag: TcasGA2_TC009293] [Chromosome: LG7] [Map Location: ] [Description: nucleolar protein 6] [Gene Type: protein-coding]","LOC656445; TcasGA2_TC009293"]
[796,"NC_007422.5",1813997,"SNV","C","G","Heterozygous",12,22,54.55,1,10,5,0.33,39.33,15,25,4,9,0.99,0.16,0.7,"no","C/G","No",1,79.9,"XP_968071.1:c.2809G>C","XP_968071.1:p.Val937Leu","LOC656445",656445,null,"656445 [Gene Symbol: LOC656445] [Locus Tag: TcasGA2_TC009293] [Chromosome: LG7] [Map Location: ] [Description: nucleolar protein 6] [Gene Type: protein-coding]","LOC656445; TcasGA2_TC009293"]
[797,"NC_007422.5",1927376,"SNV","C","A","Heterozygous",9,21,42.86,1,4,5,0.44,40.33,9,21,3,5,1.46,0.75,0.47,"no","A/C","No",1,64.61,"XP_015836757.1:c.[361C>A]; XP_001808852.2:c.[361C>A]","XP_015836757.1:p.[Arg121Ser]; XP_001808852.2:p.[Arg121Ser]","LOC100142508",100142508,null,"100142508 [Gene Symbol: LOC100142508] [Locus Tag: TcasGA2_TC009525] [Chromosome: LG7] [Map Location: ] [Description: cilia- and flagella-associated protein 53] [Gene Type: protein-coding]","LOC100142508; TcasGA2_TC009525"]
[798,"NC_007422.5",1939220,"SNV","T","G","Homozygous",23,23,100,1,15,14,0.48,35.91,29,29,12,10,null,1,1,"no","G/G","No",1,89.9,"XP_015836654.1:c.3090A>C","XP_015836654.1:p.Lys1030Asn","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[799,"NC_007422.5",1939264,"SNV","T","C","Homozygous",21,21,100,1,9,19,0.32,37.52,28,28,12,10,null,1,1,"no","C/C","No",1,83.89,"XP_015836654.1:c.3046A>G","XP_015836654.1:p.Asn1016Asp","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[800,"NC_007422.5",1939996,"SNV","G","A","Homozygous",29,29,100,1,20,21,0.49,34.9,41,41,8,14,null,1,1,"no","A/A","No",1,109.58,"XP_015836654.1:c.2314C>T","XP_015836654.1:p.Leu772Phe","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[801,"NC_007422.5",1940023,"SNV","C","T","Heterozygous",17,24,70.83,1,4,17,0.19,35.59,21,32,4,9,1.3,0.64,0.96,"no","C/T","No",1,37,"XP_015836654.1:c.2287G>A","XP_015836654.1:p.Asp763Asn","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[802,"NC_007422.5",1940026,"SNV","G","A","Heterozygous",17,24,70.83,1,4,17,0.19,36.82,21,32,4,9,2,0.98,0.96,"no","A/G","No",1,36.98,"XP_015836654.1:c.2284C>T","XP_015836654.1:p.His762Tyr","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[803,"NC_007422.5",1941310,"SNV","A","T","Homozygous",23,23,100,1,16,11,0.41,37.83,27,27,7,12,null,1,1,"no","T/T","No",1,91.54,"XP_015836654.1:c.1000T>A","XP_015836654.1:p.Ser334Thr","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[804,"NC_007422.5",1989521,"SNV","G","C","Heterozygous",8,32,25,1,3,5,0.38,34.62,8,35,6,5,-2.28,0.34,0.88,"no","C/G","No",1,26.5,"XP_970328.1:c.2530G>C","XP_970328.1:p.Ala844Pro","LOC658884",658884,null,"658884 [Gene Symbol: LOC658884] [Locus Tag: TcasGA2_TC009532] [Chromosome: LG7] [Map Location: ] [Description: 5-oxoprolinase] [Gene Type: protein-coding]","TcasGA2_TC009532; LOC658884"]
[805,"NC_007422.5",2190153,"SNV","G","T","Heterozygous",6,20,30,1,3,3,0.5,37.33,6,24,4,5,1.61,0.42,0.74,"no","G/T","No",1,31.77,"XP_970923.1:c.303G>T","XP_970923.1:p.Glu101Asp","LOC659531",659531,null,"659531 [Gene Symbol: LOC659531] [Locus Tag: TcasGA2_TC009536] [Chromosome: LG7] [Map Location: ] [Description: MRG/MORF4L-binding protein] [Gene Type: protein-coding]","TcasGA2_TC009536; LOC659531"]
[806,"NC_007422.5",2233853,"SNV","T","C","Heterozygous",14,25,56,1,6,14,0.3,38,20,34,5,4,1.2,0.41,1,"no","C/T","No",1,73.69,"XP_008195311.1:c.[2518T>C]; XP_008195309.1:c.[2518T>C]; XP_971641.1:c.[2518T>C]; XP_008195310.1:c.[2518T>C]","XP_008195311.1:p.[Ser840Pro]; XP_008195309.1:p.[Ser840Pro]; XP_971641.1:p.[Ser840Pro]; XP_008195310.1:p.[Ser840Pro]","LOC660305",660305,null,"660305 [Gene Symbol: LOC660305] [Locus Tag: TcasGA2_TC009542] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC660305] [Gene Type: protein-coding]","schnurri; TcasGA2_TC009542; LOC660305; shn"]
[807,"NC_007422.5",2249698,"SNV","A","T","Homozygous",31,31,100,1,10,30,0.25,38.29,40,40,11,15,null,1,1,"no","T/T","No",1,115.61,"XP_008195313.1:c.2452A>T","XP_008195313.1:p.Ile818Phe","LOC660552",660552,null,"660552 [Gene Symbol: LOC660552] [Locus Tag: TcasGA2_TC009544] [Chromosome: LG7] [Map Location: ] [Description: UPF0505 protein C16orf62 homolog] [Gene Type: protein-coding]","TcasGA2_TC009544; LOC660552"]
[808,"NC_007422.5",2263650,"SNV","G","T","Heterozygous",6,25,24,0.97,6,0,0,40.83,6,26,1,4,1.62,0.06,0.16,"no","G/T","No",1,15.14,"XP_972080.1:c.277G>T","XP_972080.1:p.Asp93Tyr","LOC660782",660782,null,"660782 [Gene Symbol: LOC660782] [Locus Tag: TcasGA2_TC009547] [Chromosome: LG7] [Map Location: ] [Description: RNA-binding motif protein, X-linked 2] [Gene Type: protein-coding]","LOC660782; TcasGA2_TC009547"]
[809,"NC_007422.5",2296499,"SNV","T","G","Heterozygous",9,24,37.5,1,0,9,0,40.44,9,26,1,2,3.49,0.06,0.24,"no","G/T","No",1,63.94,"XP_008195317.2:c.6301T>G","XP_008195317.2:p.Ser2101Ala","LOC660888",660888,null,"660888 [Gene Symbol: LOC660888] [Locus Tag: TcasGA2_TC009548] [Chromosome: LG7] [Map Location: ] [Description: prolow-density lipoprotein receptor-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC009548; LOC660888"]
[810,"NC_007422.5",2311476,"SNV","G","C","Homozygous",20,22,90.91,1,10,16,0.38,35.15,26,28,7,8,null,1,1,"no","C/C","No",1,23.04,"XP_008195317.2:c.13324G>C","XP_008195317.2:p.Val4442Leu","LOC660888",660888,null,"660888 [Gene Symbol: LOC660888] [Locus Tag: TcasGA2_TC009548] [Chromosome: LG7] [Map Location: ] [Description: prolow-density lipoprotein receptor-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC009548; LOC660888"]
[811,"NC_007422.5",2311482,"SNV","A","C","Homozygous",21,24,87.5,0.99,10,17,0.37,36.33,27,30,7,9,null,0.98,1,"no","C/C","No",1,20.37,"XP_008195317.2:c.13330A>C","XP_008195317.2:p.Thr4444Pro","LOC660888",660888,null,"660888 [Gene Symbol: LOC660888] [Locus Tag: TcasGA2_TC009548] [Chromosome: LG7] [Map Location: ] [Description: prolow-density lipoprotein receptor-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC009548; LOC660888"]
[812,"NC_007422.5",2311542,"SNV","G","A","Homozygous",19,22,86.36,0.88,8,13,0.38,37.37,21,26,7,10,null,0.93,1,"no","A/A","No",1,9.12,"XP_008195317.2:c.13390G>A","XP_008195317.2:p.Ala4464Thr","LOC660888",660888,null,"660888 [Gene Symbol: LOC660888] [Locus Tag: TcasGA2_TC009548] [Chromosome: LG7] [Map Location: ] [Description: prolow-density lipoprotein receptor-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC009548; LOC660888"]
[813,"NC_007422.5","2363011^2363012","Insertion","-","C","Heterozygous",4,20,20,0.93,0,4,0,37.25,4,22,1,1,1.04,0.07,0.64,"no","-/C","No",1,11.35,"XP_008195323.1:c.[2405_2406insC]; XP_008195324.1:c.[2405_2406insC]; XP_972761.1:c.[2387_2388insC]","XP_008195323.1:p.[Asp803fs]; XP_008195324.1:p.[Asp803fs]; XP_972761.1:p.[Asp797fs]","Fpps, LOC661513","661272 , 661513","farnesyl pyrophosphate synthase","661272 [Gene Symbol: Fpps] [Locus Tag: TcasGA2_TC009256] [Chromosome: LG7] [Map Location: ] [Description: farnesyl pyrophosphate synthase] [Gene Type: protein-coding] || 661513 [Gene Symbol: LOC661513] [Locus Tag: TcasGA2_TC009552] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC661513] [Gene Type: protein-coding]","Fpps; TcasGA2_TC009256 || LOC661513; TcasGA2_TC009552"]
[814,"NC_007422.5",2366467,"SNV","G","C","Homozygous",21,21,100,1,18,5,0.22,38.43,23,23,8,13,null,1,1,"no","C/C","No",1,83.89,"XP_972801.1:c.789G>C","XP_972801.1:p.Met263Ile","Fpps, LOC661557","661272 , 661557","farnesyl pyrophosphate synthase","661272 [Gene Symbol: Fpps] [Locus Tag: TcasGA2_TC009256] [Chromosome: LG7] [Map Location: ] [Description: farnesyl pyrophosphate synthase] [Gene Type: protein-coding] || 661557 [Gene Symbol: LOC661557] [Locus Tag: TcasGA2_TC033565] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC661557] [Gene Type: protein-coding]","Fpps; TcasGA2_TC009256 || LOC661557; TcasGA2_TC033565"]
[815,"NC_007422.5",2560881,"SNV","G","A","Homozygous",25,28,89.29,1,11,18,0.38,38.28,29,34,9,15,null,0.96,1,"no","A/A","No",1,25.32,"XP_008195332.1:c.[3658G>A]; XP_008195333.1:c.[3577G>A]; XP_015836973.1:c.[3682G>A]","XP_008195332.1:p.[Val1220Ile]; XP_008195333.1:p.[Val1193Ile]; XP_015836973.1:p.[Val1228Ile]","LOC662162",662162,null,"662162 [Gene Symbol: LOC662162] [Locus Tag: TcasGA2_TC009560] [Chromosome: LG7] [Map Location: ] [Description: pebbled] [Gene Type: protein-coding]","TcasGA2_TC009560; LOC662162; Peb"]
[816,"NC_007422.5",2565645,"SNV","T","A","Homozygous",21,21,100,1,18,7,0.28,35.86,25,25,9,16,null,1,1,"no","A/A","No",1,85.5,"XP_015836994.1:c.[870T>A]; XP_008195334.1:c.[870T>A]","XP_015836994.1:p.[Asp290Glu]; XP_008195334.1:p.[Asp290Glu]","LOC100142374",100142374,null,"100142374 [Gene Symbol: LOC100142374] [Locus Tag: TcasGA2_TC009561] [Chromosome: LG7] [Map Location: ] [Description: component of oligomeric golgi complex 1] [Gene Type: protein-coding]","pebbled; TcasGA2_TC009561; Cog1; LOC100142374; peb"]
[817,"NC_007422.5",2752162,"SNV","C","A","Heterozygous",20,26,76.92,0.99,14,7,0.33,34.3,21,27,7,17,-3.65,0.68,0.96,"no","A/C","No",1,20.41,"XP_973605.1:c.[2582C>A]; XP_015837001.1:c.[2471C>A]","XP_973605.1:p.[Pro861Gln]; XP_015837001.1:p.[Pro824Gln]","LOC662415",662415,null,"662415 [Gene Symbol: LOC662415] [Locus Tag: TcasGA2_TC009567] [Chromosome: LG7] [Map Location: ] [Description: nephrin] [Gene Type: protein-coding]","TcasGA2_TC009567; LOC662415"]
[818,"NC_007422.5","2842039..2842040","MNV","AA","TG","Heterozygous",4,20,20,1,0,4,0,36.14,4,21,1,1,null,0.01,0.21,"no","complex","No",1,200,"NP_001161921.1:c.1014_1015delAAinsTG","NP_001161921.1:p.Glu338_Lys339delinsAspGlu","Pmp2-c",662882,"peritrophic matrix protein 2-C","662882 [Gene Symbol: Pmp2-c] [Locus Tag: TcasGA2_TC009580] [Chromosome: LG7] [Map Location: ] [Description: peritrophic matrix protein 2-C] [Gene Type: protein-coding]","TcasGA2_TC009580; Pmp2-c"]
[819,"NC_007422.5",2842040,"SNV","A","G","Heterozygous",16,20,80,1,12,5,0.29,39.35,17,21,8,8,null,0.58,0.86,"no","complex","No",1,200,"NP_001161921.1:c.1015A>G","NP_001161921.1:p.Lys339Glu","Pmp2-c",662882,"peritrophic matrix protein 2-C","662882 [Gene Symbol: Pmp2-c] [Locus Tag: TcasGA2_TC009580] [Chromosome: LG7] [Map Location: ] [Description: peritrophic matrix protein 2-C] [Gene Type: protein-coding]","TcasGA2_TC009580; Pmp2-c"]
[820,"NC_007422.5",2916276,"SNV","T","C","Homozygous",20,20,100,1,10,14,0.42,36.75,24,24,6,11,null,1,1,"no","C/C","No",1,80.88,"XP_008195359.1:c.1142T>C","XP_008195359.1:p.Val381Ala","LOC663130",663130,null,"663130 [Gene Symbol: LOC663130] [Locus Tag: TcasGA2_TC009583] [Chromosome: LG7] [Map Location: ] [Description: diacylglycerol kinase 1] [Gene Type: protein-coding]","TcasGA2_TC009583; LOC663130"]
[821,"NC_007422.5",2974006,"SNV","G","A","Homozygous",20,20,100,1,15,9,0.38,39.15,24,24,10,12,null,1,1,"no","A/A","No",1,82.49,"XP_008196611.1:c.691G>A","XP_008196611.1:p.Gly231Arg","LOC655536",655536,null,"655536 [Gene Symbol: LOC655536] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: oxidative stress-induced growth inhibitor 2-like] [Gene Type: protein-coding]","LOC655536"]
[822,"NC_007422.5",3052758,"SNV","C","T","Heterozygous",8,21,38.1,1,2,6,0.25,38.62,8,23,3,7,0.58,0.16,0.22,"no","C/T","No",1,56.41,"XP_015836877.1:c.791G>A","XP_015836877.1:p.Arg264Lys","LOC107398182",107398182,null,"107398182 [Gene Symbol: LOC107398182] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: eukaryotic translation initiation factor 5B-like] [Gene Type: protein-coding]","LOC107398182"]
[823,"NC_007422.5",3101933,"SNV","G","A","Homozygous",19,21,90.48,0.99,16,8,0.33,37.16,24,26,11,11,null,0.99,1,"no","A/A","No",1,20.43,"XP_968980.1:c.287C>T","XP_968980.1:p.Thr96Ile","LOC657426",657426,null,"657426 [Gene Symbol: LOC657426] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: coiled-coil-helix-coiled-coil-helix domain-containing protein 1] [Gene Type: protein-coding]","LOC657426"]
[824,"NC_007422.5",3170650,"SNV","C","G","Homozygous",20,20,100,1,17,5,0.23,38.6,22,22,10,11,null,1,1,"no","G/G","No",1,80.88,"XP_015836936.1:c.[112G>C]; XP_008195397.1:c.[112G>C]","XP_015836936.1:p.[Val38Leu]; XP_008195397.1:p.[Val38Leu]","LOC103313578",103313578,null,"103313578 [Gene Symbol: LOC103313578] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: gustatory receptor 68a-like] [Gene Type: protein-coding]","LOC103313578"]
[825,"NC_007422.5",3190243,"SNV","T","G","Homozygous",20,20,100,1,11,11,0.5,37.55,22,22,6,11,null,1,1,"no","G/G","No",1,80.87,"XP_015836929.1:c.[3493T>G]; XP_015836928.1:c.[4096T>G]; XP_008195400.1:c.[4084T>G]; XP_008195401.1:c.[4075T>G]; XP_008195399.1:c.[4096T>G]","XP_015836929.1:p.[Ser1165Ala]; XP_015836928.1:p.[Ser1366Ala]; XP_008195400.1:p.[Ser1362Ala]; XP_008195401.1:p.[Ser1359Ala]; XP_008195399.1:p.[Ser1366Ala]","LOC658515",658515,null,"658515 [Gene Symbol: LOC658515] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase T] [Gene Type: protein-coding]","LOC658515"]
[826,"NC_007422.5",3191169,"SNV","T","G","Homozygous",22,22,100,1,7,15,0.32,38.55,22,22,12,11,null,1,1,"no","G/G","No",1,86.9,"XP_008195401.1:c.[4855T>G]; XP_015836929.1:c.[4273T>G]; XP_008195400.1:c.[4864T>G]; XP_008195399.1:c.[4876T>G]; XP_015836928.1:c.[4819T>G]","XP_008195401.1:p.[Leu1619Val]; XP_015836929.1:p.[Leu1425Val]; XP_008195400.1:p.[Leu1622Val]; XP_008195399.1:p.[Leu1626Val]; XP_015836928.1:p.[Leu1607Val]","LOC658515",658515,null,"658515 [Gene Symbol: LOC658515] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase T] [Gene Type: protein-coding]","LOC658515"]
[827,"NC_007422.5",3191193,"SNV","G","A","Heterozygous",5,21,23.81,0.99,0,5,0,39.4,5,21,2,3,0.7,0.22,0.27,"no","A/G","No",1,18.29,"XP_008195400.1:c.[4888G>A]; XP_008195401.1:c.[4879G>A]; XP_015836929.1:c.[4297G>A]; XP_015836928.1:c.[4843G>A]; XP_008195399.1:c.[4900G>A]","XP_008195400.1:p.[Glu1630Lys]; XP_008195401.1:p.[Glu1627Lys]; XP_015836929.1:p.[Glu1433Lys]; XP_015836928.1:p.[Glu1615Lys]; XP_008195399.1:p.[Glu1634Lys]","LOC658515",658515,null,"658515 [Gene Symbol: LOC658515] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase T] [Gene Type: protein-coding]","LOC658515"]
[828,"NC_007422.5",3209599,"SNV","A","C","Homozygous",20,20,100,1,13,12,0.48,37.8,25,25,12,14,null,1,1,"no","C/C","No",1,80.88,"XP_008195403.1:c.626T>G","XP_008195403.1:p.Met209Arg","LOC658740",658740,null,"658740 [Gene Symbol: LOC658740] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658740] [Gene Type: protein-coding]","LOC658740"]
[829,"NC_007422.5",3231287,"SNV","C","G","Heterozygous",14,27,51.85,1,7,7,0.5,37.29,14,27,5,9,-0.7,0.72,0.88,"no","C/G","No",1,104.1,"XP_970673.1:c.[3695G>C]; XP_008195407.1:c.[331+287C>G]","XP_970673.1:p.Gly1232Ala","LOC103313580, LOC659255","103313580 , 659255",null,"103313580 [Gene Symbol: LOC103313580] [Locus Tag: TcasGA2_TC009609] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313580] [Gene Type: protein-coding] || 659255 [Gene Symbol: LOC659255] [Locus Tag: TcasGA2_TC009199] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC659255] [Gene Type: protein-coding]","LOC103313580; TcasGA2_TC009609 || TcasGA2_TC009199; LOC659255"]
[830,"NC_007422.5","3231289..3231290","MNV","CA","AG","Heterozygous",14,26,53.85,1,7,7,0.5,36.82,14,26,5,9,2.7,0.72,0.88,"no","complex","No",1,200,"XP_008195407.1:c.[331+289_331+290delCAinsAG]; XP_970673.1:c.[3692_3693delTGinsCT]","XP_970673.1:p.Val1231Ala","LOC103313580, LOC659255","103313580 , 659255",null,"103313580 [Gene Symbol: LOC103313580] [Locus Tag: TcasGA2_TC009609] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313580] [Gene Type: protein-coding] || 659255 [Gene Symbol: LOC659255] [Locus Tag: TcasGA2_TC009199] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC659255] [Gene Type: protein-coding]","LOC103313580; TcasGA2_TC009609 || TcasGA2_TC009199; LOC659255"]
[831,"NC_007422.5",3262540,"SNV","T","C","Homozygous",24,24,100,1,16,8,0.33,35.67,24,24,7,16,null,1,1,"no","C/C","No",1,92.92,"XP_971352.1:c.368T>C","XP_971352.1:p.Val123Ala","LOC659995",659995,null,"659995 [Gene Symbol: LOC659995] [Locus Tag: TcasGA2_TC009613] [Chromosome: LG7] [Map Location: ] [Description: WD repeat-containing protein 92] [Gene Type: protein-coding]","TcasGA2_TC009613; LOC659995"]
[832,"NC_007422.5",3272458,"SNV","T","G","Homozygous",26,26,100,1,20,9,0.31,38.42,29,29,11,17,null,1,1,"no","G/G","No",1,98.93,"XP_015836825.1:c.[1082A>C]; XP_008195415.1:c.[1082A>C]","XP_015836825.1:p.[His361Pro]; XP_008195415.1:p.[His361Pro]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[833,"NC_007422.5",3272507,"SNV","A","G","Homozygous",25,25,100,1,15,23,0.39,37.64,38,38,15,15,null,1,1,"no","G/G","No",1,92.92,"XP_015836825.1:c.[1033T>C]; XP_008195415.1:c.[1033T>C]","XP_015836825.1:p.[Ser345Pro]; XP_008195415.1:p.[Ser345Pro]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[834,"NC_007422.5",3291920,"SNV","A","T","Homozygous",22,22,100,1,13,9,0.41,36.64,22,22,12,17,null,1,1,"no","T/T","No",1,88.54,"XP_015836826.1:c.[317T>A]; XP_015836827.1:c.[317T>A]","XP_015836826.1:p.[Phe106Tyr]; XP_015836827.1:p.[Phe106Tyr]","LOC660728",660728,null,"660728 [Gene Symbol: LOC660728] [Locus Tag: TcasGA2_TC009186] [Chromosome: LG7] [Map Location: ] [Description: alpha-mannosidase 2] [Gene Type: protein-coding]","TcasGA2_TC009186; LOC660728"]
[835,"NC_007422.5",3291951,"SNV","C","T","Heterozygous",5,20,25,0.99,5,0,0,37.4,5,20,3,3,0.13,0.24,0.24,"no","C/T","No",1,21.11,"XP_015836826.1:c.[286G>A]; XP_015836827.1:c.[286G>A]","XP_015836826.1:p.[Gly96Ser]; XP_015836827.1:p.[Gly96Ser]","LOC660728",660728,null,"660728 [Gene Symbol: LOC660728] [Locus Tag: TcasGA2_TC009186] [Chromosome: LG7] [Map Location: ] [Description: alpha-mannosidase 2] [Gene Type: protein-coding]","TcasGA2_TC009186; LOC660728"]
[836,"NC_007422.5",3351532,"SNV","T","C","Homozygous",20,20,100,1,5,19,0.21,34.8,24,24,8,8,null,1,1,"no","C/C","No",1,80.88,"XP_972538.1:c.1540A>G","XP_972538.1:p.Lys514Glu","LOC661273",661273,null,"661273 [Gene Symbol: LOC661273] [Locus Tag: TcasGA2_TC009182] [Chromosome: LG7] [Map Location: ] [Description: squamous cell carcinoma antigen recognized by T-cells 3] [Gene Type: protein-coding]","TcasGA2_TC009182; LOC661273"]
[837,"NC_007422.5",3352288,"SNV","G","T","Heterozygous",6,24,25,0.98,6,0,0,40.17,6,26,1,6,1.9,0.18,0.38,"no","G/T","No",1,17.88,"XP_972538.1:c.784C>A","XP_972538.1:p.Arg262Ser","LOC661273",661273,null,"661273 [Gene Symbol: LOC661273] [Locus Tag: TcasGA2_TC009182] [Chromosome: LG7] [Map Location: ] [Description: squamous cell carcinoma antigen recognized by T-cells 3] [Gene Type: protein-coding]","TcasGA2_TC009182; LOC661273"]
[838,"NC_007422.5",3352296,"SNV","C","T","Heterozygous",7,29,24.14,0.99,7,1,0.12,36.43,8,31,3,7,-1.71,0.95,0.75,"no","C/T","No",1,21.51,"XP_972538.1:c.776G>A","XP_972538.1:p.Arg259Gln","LOC661273",661273,null,"661273 [Gene Symbol: LOC661273] [Locus Tag: TcasGA2_TC009182] [Chromosome: LG7] [Map Location: ] [Description: squamous cell carcinoma antigen recognized by T-cells 3] [Gene Type: protein-coding]","TcasGA2_TC009182; LOC661273"]
[839,"NC_007422.5",3352514,"SNV","T","G","Heterozygous",25,40,62.5,1,11,14,0.44,38.72,25,42,3,11,2.79,0.1,0.9,"no","G/T","No",1,88.19,"XP_972538.1:c.558A>C","XP_972538.1:p.Glu186Asp","LOC661273",661273,null,"661273 [Gene Symbol: LOC661273] [Locus Tag: TcasGA2_TC009182] [Chromosome: LG7] [Map Location: ] [Description: squamous cell carcinoma antigen recognized by T-cells 3] [Gene Type: protein-coding]","TcasGA2_TC009182; LOC661273"]
[840,"NC_007422.5",3355106,"SNV","G","T","Heterozygous",6,25,24,0.97,5,6,0.45,34.67,11,35,2,4,-2.42,0.37,0.96,"no","G/T","No",1,15.18,"XP_972593.1:c.1073C>A","XP_972593.1:p.Ser358*","LOC661336",661336,null,"661336 [Gene Symbol: LOC661336] [Locus Tag: TcasGA2_TC009181] [Chromosome: LG7] [Map Location: ] [Description: neuroendocrine convertase 2] [Gene Type: protein-coding]","TcasGA2_TC009181; LOC661336"]
[841,"NC_007422.5",3572527,"SNV","G","A","Heterozygous",16,24,66.67,1,4,15,0.21,39.31,19,31,11,12,-1.22,0.76,0.99,"no","A/G","No",1,49.72,"XP_973793.1:c.250G>A","XP_973793.1:p.Val84Ile","LOC662614",662614,null,"662614 [Gene Symbol: LOC662614] [Locus Tag: TcasGA2_TC009643] [Chromosome: LG7] [Map Location: ] [Description: spermine oxidase] [Gene Type: protein-coding]","LOC662614; TcasGA2_TC009643"]
[842,"NC_007422.5",3586786,"SNV","G","A","Heterozygous",13,20,65,1,3,10,0.23,39.77,13,20,6,7,2.22,0.36,0.92,"no","A/G","No",1,48.09,"XP_015836786.1:c.2777C>T","XP_015836786.1:p.Thr926Ile","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[843,"NC_007422.5",3588809,"SNV","A","C","Heterozygous",11,23,47.83,1,9,3,0.25,36.73,12,25,4,9,-2.15,0.85,0.89,"no","A/C","No",1,91.36,"XP_015836786.1:c.1105T>G","XP_015836786.1:p.Ser369Ala","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[844,"NC_007422.5",3588819,"SNV","C","G","Homozygous",25,25,100,1,22,8,0.27,37.8,30,30,8,14,null,1,1,"no","G/G","No",1,95.93,"XP_015836786.1:c.1095G>C","XP_015836786.1:p.Glu365Asp","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[845,"NC_007422.5",3599368,"SNV","A","G","Homozygous",25,25,100,1,23,9,0.28,38.08,32,32,7,16,null,1,1,"no","G/G","No",1,95.93,"XP_967226.1:c.508A>G","XP_967226.1:p.Lys170Glu","LOC662210",662210,null,"662210 [Gene Symbol: LOC662210] [Locus Tag: TcasGA2_TC009648] [Chromosome: LG7] [Map Location: ] [Description: luciferin 4-monooxygenase] [Gene Type: protein-coding]","TcasGA2_TC009648; LOC662210"]
[846,"NC_007422.5",3601876,"SNV","C","A","Heterozygous",15,22,68.18,1,6,12,0.33,37.07,18,25,5,6,0.6,0.66,0.92,"no","A/C","No",1,47.07,"XP_015836787.1:c.959C>A","XP_015836787.1:p.Thr320Lys","LOC662911",662911,null,"662911 [Gene Symbol: LOC662911] [Locus Tag: TcasGA2_TC009649] [Chromosome: LG7] [Map Location: ] [Description: HC-toxin synthetase] [Gene Type: protein-coding]","TcasGA2_TC009649; LOC662911"]
[847,"NC_007422.5",3601894,"SNV","C","T","Heterozygous",6,25,24,0.99,3,3,0.5,39.5,6,30,2,3,0.76,0.16,0.74,"no","C/T","No",1,19.86,"XP_015836787.1:c.977C>T","XP_015836787.1:p.Ser326Leu","LOC662911",662911,null,"662911 [Gene Symbol: LOC662911] [Locus Tag: TcasGA2_TC009649] [Chromosome: LG7] [Map Location: ] [Description: HC-toxin synthetase] [Gene Type: protein-coding]","TcasGA2_TC009649; LOC662911"]
[848,"NC_007422.5",3605012,"SNV","G","C","Heterozygous",8,30,26.67,1,8,0,0,38,8,38,1,7,2.56,{"v":0.00801,"d":"8.01E-03"},0.15,"no","C/G","No",1,32.08,"XP_015836787.1:c.2744G>C","XP_015836787.1:p.Ser915Thr","LOC662911",662911,null,"662911 [Gene Symbol: LOC662911] [Locus Tag: TcasGA2_TC009649] [Chromosome: LG7] [Map Location: ] [Description: HC-toxin synthetase] [Gene Type: protein-coding]","TcasGA2_TC009649; LOC662911"]
[849,"NC_007422.5",3622560,"SNV","C","T","Heterozygous",14,22,63.64,1,14,0,0,39.29,14,22,4,13,-0.07,0.23,0.43,"no","C/T","No",1,55.37,"XP_015837002.1:c.[289G>A]; XP_008195443.1:c.[289G>A]; XP_008195442.1:c.[289G>A]","XP_015837002.1:p.[Asp97Asn]; XP_008195443.1:p.[Asp97Asn]; XP_008195442.1:p.[Asp97Asn]","LOC663050",663050,null,"663050 [Gene Symbol: LOC663050] [Locus Tag: TcasGA2_TC009162] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663050] [Gene Type: protein-coding]","TcasGA2_TC009162; LOC663050"]
[850,"NC_007422.5","3622803..3622804","MNV","GC","TT","Heterozygous",14,20,70,1,4,14,0.22,38.89,18,25,5,11,0.97,0.94,1,"no","complex","No",1,200,"XP_008195442.1:c.[45_46delGCinsAA]; XP_015837002.1:c.[45_46delGCinsAA]; XP_008195443.1:c.[45_46delGCinsAA]","XP_008195442.1:p.[Arg16Ser]; XP_015837002.1:p.[Arg16Ser]; XP_008195443.1:p.[Arg16Ser]","LOC663050",663050,null,"663050 [Gene Symbol: LOC663050] [Locus Tag: TcasGA2_TC009162] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663050] [Gene Type: protein-coding]","TcasGA2_TC009162; LOC663050"]
[851,"NC_007422.5","3623438..3623439","MNV","GT","AA","Heterozygous",6,20,30,1,0,6,0,40.75,6,20,3,2,2.73,0.82,0.88,"no","complex","No",1,200,"XP_974231.1:c.332_333delGTinsAA","XP_974231.1:p.Gly111Glu","LOC663077",663077,null,"663077 [Gene Symbol: LOC663077] [Locus Tag: TcasGA2_TC009654] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663077] [Gene Type: protein-coding]","TcasGA2_TC009654; LOC663077"]
[852,"NC_007422.5",3655889,"SNV","A","C","Heterozygous",21,31,67.74,1,10,14,0.42,35.76,24,35,8,14,-1.08,0.89,1,"no","A/C","No",1,49.52,"XP_974405.1:c.331A>C","XP_974405.1:p.Asn111His","LOC663256",663256,null,"663256 [Gene Symbol: LOC663256] [Locus Tag: TcasGA2_TC009659] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663256] [Gene Type: protein-coding]","LOC663256; TcasGA2_TC009659"]
[853,"NC_007422.5",3658109,"SNV","T","G","Heterozygous",17,23,73.91,0.99,7,14,0.33,37.94,21,27,7,11,0.32,0.97,1,"no","G/T","No",1,20.66,"XP_974424.1:c.394T>G","XP_974424.1:p.Ser132Ala","LOC663275",663275,null,"663275 [Gene Symbol: LOC663275] [Locus Tag: TcasGA2_TC009660] [Chromosome: LG7] [Map Location: ] [Description: transcription factor TFIIIB component B'' homolog] [Gene Type: protein-coding]","LOC663275; TcasGA2_TC009660"]
[854,"NC_007422.5","3746136^3746137","Insertion","-","GCT","Homozygous",39,43,90.7,1,0,39,0,38.36,39,43,8,19,1.9,1,1,"no","GCT/GCT","No",1,200,"XP_015836977.1:c.[1516_1517insAGC]; XP_015836976.1:c.[1600_1601insAGC]","XP_015836977.1:p.[Gln505_Arg506insGln]; XP_015836976.1:p.[Gln533_Arg534insGln]","LOC663408",663408,null,"663408 [Gene Symbol: LOC663408] [Locus Tag: TcasGA2_TC009151] [Chromosome: LG7] [Map Location: ] [Description: membralin] [Gene Type: protein-coding]","TcasGA2_TC009151; LOC663408"]
[855,"NC_007422.5",3806413,"SNV","T","G","Homozygous",22,22,100,1,22,9,0.29,37.73,31,31,9,14,null,1,1,"no","G/G","No",1,86.9,"XP_008195456.1:c.2138A>C","XP_008195456.1:p.Lys713Thr","LOC663570",663570,null,"663570 [Gene Symbol: LOC663570] [Locus Tag: TcasGA2_TC009148] [Chromosome: LG7] [Map Location: ] [Description: tetratricopeptide repeat protein 37] [Gene Type: protein-coding]","LOC663570; TcasGA2_TC009148"]
[856,"NC_007422.5",3831435,"SNV","A","G","Heterozygous",4,20,20,0.9,4,0,0,34.75,4,20,2,4,0.43,0.3,0.46,"no","A/G","No",1,10.22,"XP_967308.1:c.[866A>G]; XP_008195460.1:c.[896A>G]; XP_008195459.1:c.[980A>G]","XP_967308.1:p.[Asn289Ser]; XP_008195460.1:p.[Asn299Ser]; XP_008195459.1:p.[Asn327Ser]","LOC662980",662980,null,"662980 [Gene Symbol: LOC662980] [Locus Tag: TcasGA2_TC009672] [Chromosome: LG7] [Map Location: ] [Description: protein pellino] [Gene Type: protein-coding]","TcasGA2_TC009672; LOC662980"]
[857,"NC_007422.5",4097266,"SNV","C","T","Homozygous",21,21,100,1,6,17,0.26,38.81,23,23,9,10,null,1,1,"no","T/T","No",1,85.53,"XP_008200152.1:c.98G>A","XP_008200152.1:p.Gly33Asp","LOC657845",657845,null,"657845 [Gene Symbol: LOC657845] [Locus Tag: TcasGA2_TC015943] [Chromosome: LG7] [Map Location: ] [Description: ATP-dependent RNA helicase DDX24] [Gene Type: protein-coding]","TcasGA2_TC015943; LOC657845"]
[858,"NC_007422.5",4132082,"SNV","C","A","Heterozygous",14,22,63.64,1,11,8,0.42,35.5,19,29,8,9,-2.12,0.22,0.86,"no","A/C","No",1,57.07,"XP_968571.3:c.[556C>A]; XP_008200143.1:c.[556C>A]","XP_968571.3:p.[Leu186Ile]; XP_008200143.1:p.[Leu186Ile]","LOC656985",656985,null,"656985 [Gene Symbol: LOC656985] [Locus Tag: TcasGA2_TC015912] [Chromosome: LG7] [Map Location: ] [Description: ornithine decarboxylase 1] [Gene Type: protein-coding]","TcasGA2_TC015912; LOC656985"]
[859,"NC_007422.5",4152272,"SNV","A","G","Heterozygous",12,31,38.71,1,12,2,0.14,37.33,14,41,6,6,-0.49,0.3,0.52,"no","A/G","No",1,81.32,"XP_015836868.1:c.[77A>G]; XP_015836869.1:c.[77A>G]; XP_008200131.2:c.[77A>G]; XP_015836867.1:c.[77A>G]","XP_015836868.1:p.[Asn26Ser]; XP_015836869.1:p.[Asn26Ser]; XP_008200131.2:p.[Asn26Ser]; XP_015836867.1:p.[Asn26Ser]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[860,"NC_007422.5",4152547,"SNV","A","T","Heterozygous",19,33,57.58,1,4,15,0.21,36.63,19,33,8,12,1.02,0.56,0.9,"no","A/T","No",1,99.75,"XP_015836869.1:c.[352A>T]; XP_015836867.1:c.[352A>T]; XP_015836868.1:c.[352A>T]; XP_008200131.2:c.[352A>T]","XP_015836869.1:p.[Thr118Ser]; XP_015836867.1:p.[Thr118Ser]; XP_015836868.1:p.[Thr118Ser]; XP_008200131.2:p.[Thr118Ser]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[861,"NC_007422.5",4152564,"SNV","C","G","Heterozygous",7,26,26.92,1,2,5,0.29,36.29,7,26,3,3,-0.26,0.27,1,"no","C/G","No",1,30.2,"XP_008200131.2:c.[369C>G]; XP_015836869.1:c.[369C>G]; XP_015836868.1:c.[369C>G]; XP_015836867.1:c.[369C>G]","XP_008200131.2:p.[Phe123Leu]; XP_015836869.1:p.[Phe123Leu]; XP_015836868.1:p.[Phe123Leu]; XP_015836867.1:p.[Phe123Leu]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[862,"NC_007422.5",4155540,"SNV","A","T","Homozygous",26,26,100,1,12,19,0.39,37.58,31,31,9,19,null,1,1,"no","T/T","No",1,100.57,"XP_015836867.1:c.[2944A>T]; XP_015836869.1:c.[2848A>T]; XP_015836868.1:c.[2941A>T]; XP_008200131.2:c.[2944A>T]","XP_015836867.1:p.[Thr982Ser]; XP_015836869.1:p.[Thr950Ser]; XP_015836868.1:p.[Thr981Ser]; XP_008200131.2:p.[Thr982Ser]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[863,"NC_007422.5",4191553,"SNV","C","T","Homozygous",17,20,85,0.66,12,10,0.45,36.24,22,25,8,13,null,1,1,"no","T/T","No",1,4.72,"XP_015836875.1:c.[12-5083C>T]; XP_008200124.1:c.[1819G>A]; XP_008200126.1:c.[1759G>A]; XP_008200123.1:c.[1822G>A]; XP_015836871.1:c.[1822G>A]; XP_015836870.1:c.[1822G>A]; XP_015836872.1:c.[1822G>A]","XP_008200124.1:p.[Asp607Asn]; XP_008200126.1:p.[Asp587Asn]; XP_008200123.1:p.[Asp608Asn]; XP_015836871.1:p.[Asp608Asn]; XP_015836870.1:p.[Asp608Asn]; XP_015836872.1:p.[Asp608Asn]","LOC103314839, LOC655816","103314839 , 655816",null,"103314839 [Gene Symbol: LOC103314839] [Locus Tag: TcasGA2_TC015919] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103314839] [Gene Type: protein-coding] || 655816 [Gene Symbol: LOC655816] [Locus Tag: TcasGA2_TC015931] [Chromosome: LG7] [Map Location: ] [Description: epidermal growth factor receptor substrate 15-like 1] [Gene Type: protein-coding]","LOC103314839; TcasGA2_TC015919 || LOC655816; TcasGA2_TC015931"]
[864,"NC_007422.5",4371145,"SNV","G","T","Heterozygous",12,20,60,1,4,8,0.33,37.67,12,20,7,4,-1.7,0.9,1,"no","G/T","No",1,62.3,"XP_966655.1:c.1000G>T","XP_966655.1:p.Val334Leu","LOC655069",655069,null,"655069 [Gene Symbol: LOC655069] [Locus Tag: TcasGA2_TC009680] [Chromosome: LG7] [Map Location: ] [Description: retinol dehydrogenase 12] [Gene Type: protein-coding]","LOC655069; TcasGA2_TC009680"]
[865,"NC_007422.5",4620536,"SNV","T","C","Heterozygous",6,25,24,0.99,6,0,0,36.83,6,32,3,3,-1.08,0.14,0.32,"no","C/T","No",1,21.49,"XP_967268.2:c.560T>C","XP_967268.2:p.Val187Ala","LOC655615",655615,null,"655615 [Gene Symbol: LOC655615] [Locus Tag: TcasGA2_TC009692] [Chromosome: LG7] [Map Location: ] [Description: acetylcholinesterase] [Gene Type: protein-coding]","LOC655615; TcasGA2_TC009692"]
[866,"NC_007422.5",4623414,"SNV","A","G","Heterozygous",6,24,25,1,3,3,0.5,38,6,27,3,4,0.17,0.1,1,"no","A/G","No",1,24.21,"XP_008195484.1:c.391A>G","XP_008195484.1:p.Thr131Ala","LOC655695",655695,null,"655695 [Gene Symbol: LOC655695] [Locus Tag: TcasGA2_TC009693] [Chromosome: LG7] [Map Location: ] [Description: acetylcholinesterase] [Gene Type: protein-coding]","LOC655695; TcasGA2_TC009693"]
[867,"NC_007422.5",4623982,"SNV","G","C","Homozygous",20,20,100,1,12,11,0.48,38.45,23,23,11,12,null,1,1,"no","C/C","No",1,80.88,"XP_008195484.1:c.868G>C","XP_008195484.1:p.Val290Leu","LOC655695",655695,null,"655695 [Gene Symbol: LOC655695] [Locus Tag: TcasGA2_TC009693] [Chromosome: LG7] [Map Location: ] [Description: acetylcholinesterase] [Gene Type: protein-coding]","LOC655695; TcasGA2_TC009693"]
[868,"NC_007422.5",4627173,"SNV","A","G","Homozygous",27,29,93.1,1,9,22,0.29,37.56,31,33,7,16,null,0.99,1,"no","G/G","No",1,48.49,"XP_967439.2:c.1693A>G","XP_967439.2:p.Ser565Gly","LOC655784",655784,null,"655784 [Gene Symbol: LOC655784] [Locus Tag: TcasGA2_TC009694] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655784] [Gene Type: protein-coding]","TcasGA2_TC009694; LOC655784"]
[869,"NC_007422.5","4660304^4660305","Insertion","-","TTCAAT","Homozygous",20,20,100,1,8,15,0.35,39.4,23,23,10,12,null,1,1,"no","TTCAAT/TTCAAT","No",1,200,"XP_008195485.1:c.665_666insATTGAA","XP_008195485.1:p.Lys221_Asn222insLysLeu","LOC103313595",103313595,null,"103313595 [Gene Symbol: LOC103313595] [Locus Tag: TcasGA2_TC033632] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313595] [Gene Type: protein-coding]","LOC103313595; TcasGA2_TC033632"]
[870,"NC_007422.5",4695641,"SNV","C","T","Heterozygous",17,22,77.27,0.99,16,4,0.2,37.76,20,25,7,11,-0.71,0.79,0.98,"no","C/T","No",1,19.88,"XP_008195509.1:c.2824G>A","XP_008195509.1:p.Gly942Ser","LOC657584",657584,null,"657584 [Gene Symbol: LOC657584] [Locus Tag: TcasGA2_TC033635] [Chromosome: LG7] [Map Location: ] [Description: bifunctional glutamate/proline--tRNA ligase] [Gene Type: protein-coding]","LOC657584; TcasGA2_TC033635"]
[871,"NC_007422.5",4708338,"SNV","A","G","Homozygous",20,20,100,1,14,12,0.46,37.6,26,26,11,13,null,1,1,"no","G/G","No",1,80.88,"XP_969201.1:c.1562A>G","XP_969201.1:p.Asn521Ser","LOC657661",657661,null,"657661 [Gene Symbol: LOC657661] [Locus Tag: TcasGA2_TC009707] [Chromosome: LG7] [Map Location: ] [Description: methionine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC657661; TcasGA2_TC009707"]
[872,"NC_007422.5",4727129,"SNV","C","A","Heterozygous",5,21,23.81,0.96,0,5,0,39.6,5,24,1,2,-0.17,0.02,0.34,"no","A/C","No",1,13.74,"XP_001812997.2:c.[1602C>A]; XP_015836866.1:c.[1602C>A]","XP_001812997.2:p.[Ser534Arg]; XP_015836866.1:p.[Ser534Arg]","LOC657976",657976,null,"657976 [Gene Symbol: LOC657976] [Locus Tag: TcasGA2_TC009708] [Chromosome: LG7] [Map Location: ] [Description: cyclin-T] [Gene Type: protein-coding]","LOC657976; TcasGA2_TC009708"]
[873,"NC_007422.5",4873653,"SNV","A","T","Homozygous",23,23,100,1,20,8,0.29,38,28,28,14,18,null,1,1,"no","T/T","No",1,91.54,"XP_015836813.1:c.298A>T","XP_015836813.1:p.Thr100Ser","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[874,"NC_007422.5",4878201,"SNV","G","A","Homozygous",46,46,100,1,37,26,0.41,36.22,63,63,15,26,null,1,1,"no","A/A","No",1,200,"XP_015836813.1:c.4652G>A","XP_015836813.1:p.Gly1551Glu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[875,"NC_007422.5",4878213,"SNV","G","C","Homozygous",43,43,100,1,29,25,0.46,36.72,54,54,16,24,null,1,1,"no","C/C","No",1,146.76,"XP_015836813.1:c.4664G>C","XP_015836813.1:p.Arg1555Pro","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[876,"NC_007422.5",4878234,"SNV","G","A","Homozygous",37,37,100,1,13,32,0.29,37.68,45,45,10,17,null,1,1,"no","A/A","No",1,133.64,"XP_015836813.1:c.4685G>A","XP_015836813.1:p.Arg1562Lys","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[877,"NC_007422.5",4878291,"SNV","T","C","Homozygous",28,28,100,1,2,27,0.07,38.68,29,29,9,13,null,1,1,"no","C/C","No",1,104.96,"XP_015836813.1:c.4742T>C","XP_015836813.1:p.Phe1581Ser","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[878,"NC_007422.5",4878297,"SNV","C","T","Homozygous",28,28,100,1,2,27,0.07,40.11,29,29,9,13,null,1,1,"no","T/T","No",1,106.59,"XP_015836813.1:c.4748C>T","XP_015836813.1:p.Ser1583Leu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[879,"NC_007422.5",4899868,"SNV","G","T","Heterozygous",7,25,28,1,7,0,0,38.43,7,28,1,7,0.79,0.15,0.25,"no","G/T","No",1,27.81,"XP_971226.2:c.[636G>T]; XP_008195532.1:c.[555G>T]","XP_971226.2:p.[Glu212Asp]; XP_008195532.1:p.[Glu185Asp]","LOC659866",659866,null,"659866 [Gene Symbol: LOC659866] [Locus Tag: TcasGA2_TC009722] [Chromosome: LG7] [Map Location: ] [Description: protein arginine N-methyltransferase 1] [Gene Type: protein-coding]","TcasGA2_TC009722; LOC659866"]
[880,"NC_007422.5",4947288,"SNV","C","A","Heterozygous",7,26,26.92,1,7,0,0,38.29,7,26,1,7,0.69,0.05,0.39,"no","A/C","No",1,25.18,"XP_008195541.1:c.[1132G>T]; XP_971755.1:c.[1132G>T]","XP_008195541.1:p.[Asp378Tyr]; XP_971755.1:p.[Asp378Tyr]","LOC660431",660431,null,"660431 [Gene Symbol: LOC660431] [Locus Tag: TcasGA2_TC009106] [Chromosome: LG7] [Map Location: ] [Description: synaptic vesicle membrane protein VAT-1 homolog-like] [Gene Type: protein-coding]","LOC660431; TcasGA2_TC009106"]
[881,"NC_007422.5",4947292,"SNV","C","A","Heterozygous",8,27,29.63,1,0,8,0,40.75,8,34,1,2,4.04,0.02,0.03,"no","A/C","No",1,37.89,"XP_008195541.1:c.[1128G>T]; XP_971755.1:c.[1128G>T]","XP_008195541.1:p.[Met376Ile]; XP_971755.1:p.[Met376Ile]","LOC660431",660431,null,"660431 [Gene Symbol: LOC660431] [Locus Tag: TcasGA2_TC009106] [Chromosome: LG7] [Map Location: ] [Description: synaptic vesicle membrane protein VAT-1 homolog-like] [Gene Type: protein-coding]","LOC660431; TcasGA2_TC009106"]
[882,"NC_007422.5",5142033,"SNV","A","T","Heterozygous",10,21,47.62,1,3,8,0.27,35.9,11,23,4,5,-0.81,0.35,0.68,"no","A/T","No",1,72.13,"XP_008192730.1:c.[910A>T]; XP_015837007.1:c.[892A>T]","XP_008192730.1:p.[Thr304Ser]; XP_015837007.1:p.[Thr298Ser]","LOC103312836, LOC660572","103312836 , 660572",null,"103312836 [Gene Symbol: LOC103312836] [Locus Tag: TcasGA2_TC009101] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: hemicentin-2] [Gene Type: protein-coding] || 660572 [Gene Symbol: LOC660572] [Locus Tag: TcasGA2_TC010578] [Chromosome: LG7] [Map Location: ] [Description: fatty acyl-CoA reductase 1] [Gene Type: protein-coding]","LOC103312836; TcasGA2_TC009101 || LOC660572; TcasGA2_TC010578"]
[883,"NC_007422.5",6396647,"SNV","A","T","Heterozygous",6,21,28.57,1,6,0,0,36,6,21,1,3,null,0.12,0.34,"no","G/T","No",1,26.14,"XP_971909.2:c.675A>T","XP_971909.2:p.Glu225Asp","LOC660600",660600,null,"660600 [Gene Symbol: LOC660600] [Locus Tag: TcasGA2_TC013293] [Chromosome: LG7] [Map Location: ] [Description: N-acetylneuraminate lyase A] [Gene Type: protein-coding]","TcasGA2_TC013293; LOC660600"]
[884,"NC_007422.5",6539928,"SNV","T","C","Heterozygous",10,20,50,1,6,4,0.4,38.1,10,22,4,7,0.08,0.24,0.88,"no","C/T","No",1,82.52,"XP_008195371.1:c.[112A>G]; XP_015837029.1:c.[112A>G]; XP_015837030.1:c.[112A>G]; XP_015837031.1:c.[112A>G]","XP_008195371.1:p.[Ile38Val]; XP_015837029.1:p.[Ile38Val]; XP_015837030.1:p.[Ile38Val]; XP_015837031.1:p.[Ile38Val]","LOC103313573",103313573,null,"103313573 [Gene Symbol: LOC103313573] [Locus Tag: TcasGA2_TC009100] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313573] [Gene Type: protein-coding]","LOC103313573; TcasGA2_TC009100"]
[885,"NC_007422.5","6749054..6749055","MNV","AC","GT","Homozygous",20,20,100,1,13,10,0.43,39.12,23,23,9,10,null,1,1,"no","GT/GT","No",1,200,"XP_008199978.1:c.[786_787delACinsGT]; XP_015837270.1:c.[534_535delACinsGT]","XP_008199978.1:p.[Leu263Phe]; XP_015837270.1:p.[Leu179Phe]","LOC658003",658003,null,"658003 [Gene Symbol: LOC658003] [Locus Tag: TcasGA2_TC016340] [Chromosome: LG7] [Map Location: ] [Description: FERM domain-containing protein 8] [Gene Type: protein-coding]","TcasGA2_TC016340; LOC658003"]
[886,"NC_007422.5",6818976,"SNV","C","A","Homozygous",19,22,86.36,0.83,13,10,0.43,37.32,23,26,9,11,null,0.99,1,"no","A/A","No",1,7.65,"XP_969006.1:c.253C>A","XP_969006.1:p.Leu85Met","LOC657453",657453,null,"657453 [Gene Symbol: LOC657453] [Locus Tag: TcasGA2_TC016342] [Chromosome: LG7] [Map Location: ] [Description: tryptophan--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC657453; TcasGA2_TC016342"]
[887,"NC_007422.5",7006507,"SNV","A","G","Homozygous",23,23,100,1,12,13,0.48,37.96,25,25,9,14,null,1,1,"no","G/G","No",1,89.91,"XP_976180.1:c.650A>G","XP_976180.1:p.Lys217Arg","LOC656310",656310,null,"656310 [Gene Symbol: LOC656310] [Locus Tag: TcasGA2_TC016358] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC656310] [Gene Type: protein-coding]","LOC656310; TcasGA2_TC016358"]
[888,"NC_007422.5",7222280,"SNV","T","G","Homozygous",22,22,100,1,13,9,0.41,38.95,22,22,7,16,null,1,1,"no","G/G","No",1,86.9,"XP_015837148.1:c.[218A>C]; XP_015837146.1:c.[329A>C]; XP_015837147.1:c.[329A>C]","XP_015837148.1:p.[Lys73Thr]; XP_015837146.1:p.[Lys110Thr]; XP_015837147.1:p.[Lys110Thr]","LOC107398245",107398245,null,"107398245 [Gene Symbol: LOC107398245] [Locus Tag: TcasGA2_TC009079] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398245] [Gene Type: protein-coding]","TcasGA2_TC009079; LOC107398245"]
[889,"NC_007422.5",7295082,"SNV","C","A","Homozygous",28,28,100,1,24,16,0.4,36.71,40,40,14,16,null,1,1,"no","A/A","No",1,106.56,"XP_015837173.1:c.[9097G>T]; XP_008199740.1:c.[9055G>T]; XP_015837197.1:c.[9073G>T]; XP_015837169.1:c.[9136G>T]; XP_015837168.1:c.[9148G>T]; XP_008199748.1:c.[8995G>T]; XP_015837198.1:c.[4848+4324G>T]; XP_015837166.1:c.[9172G>T]; XP_015837182.1:c.[9172G>T]; XP_008199742.1:c.[8968G>T]; XP_015837178.1:c.[9172G>T]; XP_015837187.1:c.[8992G>T]; XP_015837165.1:c.[9172G>T]; XP_015837194.1:c.[9172G>T]; XP_015837172.1:c.[9172G>T]; XP_015837184.1:c.[9019G>T]; XP_008199741.1:c.[8995G>T]; XP_015837167.1:c.[9154G>T]; XP_015837177.1:c.[9070G>T]; XP_015837174.1:c.[9172G>T]; XP_015837175.1:c.[9094G>T]; XP_015837192.1:c.[9172G>T]; XP_015837188.1:c.[9172G>T]; XP_015837183.1:c.[9172G>T]; XP_015837196.1:c.[4848+4324G>T]; XP_015837180.1:c.[9058G>T]; XP_015837181.1:c.[9055G>T]; XP_015837185.1:c.[9172G>T]; XP_015837193.1:c.[9172G>T]; XP_015837170.1:c.[9172G>T]; XP_015837176.1:c.[9079G>T]; XP_008199749.1:c.[8968G>T]; XP_015837190.1:c.[9172G>T]; XP_015837189.1:c.[9172G>T]; XP_015837171.1:c.[9118G>T]; XP_015837195.1:c.[5041G>T]; XP_015837191.1:c.[8968G>T]; XP_015837179.1:c.[9172G>T]; XP_015837186.1:c.[8995G>T]","XP_015837173.1:p.[Val3033Phe]; XP_008199740.1:p.[Val3019Phe]; XP_015837197.1:p.[Val3025Phe]; XP_015837169.1:p.[Val3046Phe]; XP_015837168.1:p.[Val3050Phe]; XP_008199748.1:p.[Val2999Phe]; XP_015837166.1:p.[Val3058Phe]; XP_015837182.1:p.[Val3058Phe]; XP_008199742.1:p.[Val2990Phe]; XP_015837178.1:p.[Val3058Phe]; XP_015837187.1:p.[Val2998Phe]; XP_015837165.1:p.[Val3058Phe]; XP_015837194.1:p.[Val3058Phe]; XP_015837172.1:p.[Val3058Phe]; XP_015837184.1:p.[Val3007Phe]; XP_008199741.1:p.[Val2999Phe]; XP_015837167.1:p.[Val3052Phe]; XP_015837177.1:p.[Val3024Phe]; XP_015837174.1:p.[Val3058Phe]; XP_015837175.1:p.[Val3032Phe]; XP_015837192.1:p.[Val3058Phe]; XP_015837188.1:p.[Val3058Phe]; XP_015837183.1:p.[Val3058Phe]; XP_015837180.1:p.[Val3020Phe]; XP_015837181.1:p.[Val3019Phe]; XP_015837185.1:p.[Val3058Phe]; XP_015837193.1:p.[Val3058Phe]; XP_015837170.1:p.[Val3058Phe]; XP_015837176.1:p.[Val3027Phe]; XP_008199749.1:p.[Val2990Phe]; XP_015837190.1:p.[Val3058Phe]; XP_015837189.1:p.[Val3058Phe]; XP_015837171.1:p.[Val3040Phe]; XP_015837195.1:p.[Val1681Phe]; XP_015837191.1:p.[Val2990Phe]; XP_015837179.1:p.[Val3058Phe]; XP_015837186.1:p.[Val2999Phe]","LOC662585",662585,null,"662585 [Gene Symbol: LOC662585] [Locus Tag: TcasGA2_TC009076] [Chromosome: LG7] [Map Location: ] [Description: microtubule-actin cross-linking factor 1] [Gene Type: protein-coding]","TcasGA2_TC009076; LOC662585"]
[890,"NC_007422.5",7297294,"SNV","T","G","Homozygous",26,26,100,1,12,14,0.46,39.77,26,26,9,15,null,1,1,"no","G/G","No",1,98.94,"XP_015837183.1:c.[6960A>C]; XP_015837173.1:c.[6885A>C]; XP_015837185.1:c.[6960A>C]; XP_015837197.1:c.[6861A>C]; XP_015837177.1:c.[6858A>C]; XP_008199748.1:c.[6783A>C]; XP_015837181.1:c.[6843A>C]; XP_015837167.1:c.[6942A>C]; XP_015837176.1:c.[6867A>C]; XP_008199741.1:c.[6783A>C]; XP_015837194.1:c.[6960A>C]; XP_015837196.1:c.[4848+2112A>C]; XP_015837189.1:c.[6960A>C]; XP_008199749.1:c.[6756A>C]; XP_015837182.1:c.[6960A>C]; XP_015837191.1:c.[6756A>C]; XP_015837187.1:c.[6780A>C]; XP_008199740.1:c.[6843A>C]; XP_015837170.1:c.[6960A>C]; XP_015837184.1:c.[6807A>C]; XP_015837166.1:c.[6960A>C]; XP_015837171.1:c.[6906A>C]; XP_015837175.1:c.[6882A>C]; XP_015837186.1:c.[6783A>C]; XP_015837169.1:c.[6924A>C]; XP_015837172.1:c.[6960A>C]; XP_015837193.1:c.[6960A>C]; XP_015837168.1:c.[6936A>C]; XP_015837165.1:c.[6960A>C]; XP_015837190.1:c.[6960A>C]; XP_015837178.1:c.[6960A>C]; XP_008199742.1:c.[6756A>C]; XP_015837188.1:c.[6960A>C]; XP_015837180.1:c.[6846A>C]; XP_015837198.1:c.[4848+2112A>C]; XP_015837179.1:c.[6960A>C]; XP_015837174.1:c.[6960A>C]; XP_015837192.1:c.[6960A>C]; XP_015837195.1:c.[2829A>C]","XP_015837183.1:p.[Glu2320Asp]; XP_015837173.1:p.[Glu2295Asp]; XP_015837185.1:p.[Glu2320Asp]; XP_015837197.1:p.[Glu2287Asp]; XP_015837177.1:p.[Glu2286Asp]; XP_008199748.1:p.[Glu2261Asp]; XP_015837181.1:p.[Glu2281Asp]; XP_015837167.1:p.[Glu2314Asp]; XP_015837176.1:p.[Glu2289Asp]; XP_008199741.1:p.[Glu2261Asp]; XP_015837194.1:p.[Glu2320Asp]; XP_015837189.1:p.[Glu2320Asp]; XP_008199749.1:p.[Glu2252Asp]; XP_015837182.1:p.[Glu2320Asp]; XP_015837191.1:p.[Glu2252Asp]; XP_015837187.1:p.[Glu2260Asp]; XP_008199740.1:p.[Glu2281Asp]; XP_015837170.1:p.[Glu2320Asp]; XP_015837184.1:p.[Glu2269Asp]; XP_015837166.1:p.[Glu2320Asp]; XP_015837171.1:p.[Glu2302Asp]; XP_015837175.1:p.[Glu2294Asp]; XP_015837186.1:p.[Glu2261Asp]; XP_015837169.1:p.[Glu2308Asp]; XP_015837172.1:p.[Glu2320Asp]; XP_015837193.1:p.[Glu2320Asp]; XP_015837168.1:p.[Glu2312Asp]; XP_015837165.1:p.[Glu2320Asp]; XP_015837190.1:p.[Glu2320Asp]; XP_015837178.1:p.[Glu2320Asp]; XP_008199742.1:p.[Glu2252Asp]; XP_015837188.1:p.[Glu2320Asp]; XP_015837180.1:p.[Glu2282Asp]; XP_015837179.1:p.[Glu2320Asp]; XP_015837174.1:p.[Glu2320Asp]; XP_015837192.1:p.[Glu2320Asp]; XP_015837195.1:p.[Glu943Asp]","LOC662585",662585,null,"662585 [Gene Symbol: LOC662585] [Locus Tag: TcasGA2_TC009076] [Chromosome: LG7] [Map Location: ] [Description: microtubule-actin cross-linking factor 1] [Gene Type: protein-coding]","TcasGA2_TC009076; LOC662585"]
[891,"NC_007422.5",7297296,"SNV","C","T","Homozygous",26,26,100,1,12,14,0.46,39.81,26,26,9,15,null,1,1,"no","T/T","No",1,100.57,"XP_015837178.1:c.[6958G>A]; XP_015837177.1:c.[6856G>A]; XP_015837175.1:c.[6880G>A]; XP_015837191.1:c.[6754G>A]; XP_015837193.1:c.[6958G>A]; XP_015837192.1:c.[6958G>A]; XP_008199742.1:c.[6754G>A]; XP_015837166.1:c.[6958G>A]; XP_015837194.1:c.[6958G>A]; XP_015837165.1:c.[6958G>A]; XP_015837174.1:c.[6958G>A]; XP_015837182.1:c.[6958G>A]; XP_015837188.1:c.[6958G>A]; XP_015837167.1:c.[6940G>A]; XP_015837176.1:c.[6865G>A]; XP_015837198.1:c.[4848+2110G>A]; XP_008199740.1:c.[6841G>A]; XP_015837180.1:c.[6844G>A]; XP_008199741.1:c.[6781G>A]; XP_008199749.1:c.[6754G>A]; XP_015837190.1:c.[6958G>A]; XP_015837172.1:c.[6958G>A]; XP_015837196.1:c.[4848+2110G>A]; XP_015837169.1:c.[6922G>A]; XP_015837173.1:c.[6883G>A]; XP_015837170.1:c.[6958G>A]; XP_015837189.1:c.[6958G>A]; XP_015837187.1:c.[6778G>A]; XP_015837171.1:c.[6904G>A]; XP_015837179.1:c.[6958G>A]; XP_015837185.1:c.[6958G>A]; XP_008199748.1:c.[6781G>A]; XP_015837195.1:c.[2827G>A]; XP_015837181.1:c.[6841G>A]; XP_015837197.1:c.[6859G>A]; XP_015837184.1:c.[6805G>A]; XP_015837168.1:c.[6934G>A]; XP_015837183.1:c.[6958G>A]; XP_015837186.1:c.[6781G>A]","XP_015837178.1:p.[Glu2320Lys]; XP_015837177.1:p.[Glu2286Lys]; XP_015837175.1:p.[Glu2294Lys]; XP_015837191.1:p.[Glu2252Lys]; XP_015837193.1:p.[Glu2320Lys]; XP_015837192.1:p.[Glu2320Lys]; XP_008199742.1:p.[Glu2252Lys]; XP_015837166.1:p.[Glu2320Lys]; XP_015837194.1:p.[Glu2320Lys]; XP_015837165.1:p.[Glu2320Lys]; XP_015837174.1:p.[Glu2320Lys]; XP_015837182.1:p.[Glu2320Lys]; XP_015837188.1:p.[Glu2320Lys]; XP_015837167.1:p.[Glu2314Lys]; XP_015837176.1:p.[Glu2289Lys]; XP_008199740.1:p.[Glu2281Lys]; XP_015837180.1:p.[Glu2282Lys]; XP_008199741.1:p.[Glu2261Lys]; XP_008199749.1:p.[Glu2252Lys]; XP_015837190.1:p.[Glu2320Lys]; XP_015837172.1:p.[Glu2320Lys]; XP_015837169.1:p.[Glu2308Lys]; XP_015837173.1:p.[Glu2295Lys]; XP_015837170.1:p.[Glu2320Lys]; XP_015837189.1:p.[Glu2320Lys]; XP_015837187.1:p.[Glu2260Lys]; XP_015837171.1:p.[Glu2302Lys]; XP_015837179.1:p.[Glu2320Lys]; XP_015837185.1:p.[Glu2320Lys]; XP_008199748.1:p.[Glu2261Lys]; XP_015837195.1:p.[Glu943Lys]; XP_015837181.1:p.[Glu2281Lys]; XP_015837197.1:p.[Glu2287Lys]; XP_015837184.1:p.[Glu2269Lys]; XP_015837168.1:p.[Glu2312Lys]; XP_015837183.1:p.[Glu2320Lys]; XP_015837186.1:p.[Glu2261Lys]","LOC662585",662585,null,"662585 [Gene Symbol: LOC662585] [Locus Tag: TcasGA2_TC009076] [Chromosome: LG7] [Map Location: ] [Description: microtubule-actin cross-linking factor 1] [Gene Type: protein-coding]","TcasGA2_TC009076; LOC662585"]
[892,"NC_007422.5",8059550,"SNV","G","A","Homozygous",22,22,100,1,11,16,0.41,36.77,27,27,10,14,null,1,1,"no","A/A","No",1,88.51,"XP_015837047.1:c.[103-1665G>A]; XP_008195570.1:c.[14C>T]; XP_015837048.1:c.[94-1665G>A]","XP_008195570.1:p.Ala5Val","Fdl, LOC103313618","656027 , 103313618","fused lobes","656027 [Gene Symbol: Fdl] [Locus Tag: TcasGA2_TC009779] [Chromosome: LG7] [Map Location: ] [Description: fused lobes] [Gene Type: protein-coding] || 103313618 [Gene Symbol: LOC103313618] [Locus Tag: TcasGA2_TC009051] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313618] [Gene Type: protein-coding]","TcasGA2_TC009779; Fdl || TcasGA2_TC009051; LOC103313618"]
[893,"NC_007422.5",8136209,"SNV","T","C","Homozygous",21,21,100,1,6,16,0.27,38.62,22,22,8,15,null,1,1,"no","C/C","No",1,83.89,"XP_008195582.1:c.[658A>G]; XP_008195581.1:c.[667A>G]","XP_008195582.1:p.[Ser220Gly]; XP_008195581.1:p.[Ser223Gly]","LOC103313620",103313620,null,"103313620 [Gene Symbol: LOC103313620] [Locus Tag: TcasGA2_TC009045] [Chromosome: LG7] [Map Location: ] [Description: proteoglycan 4] [Gene Type: protein-coding]","LOC103313620; TcasGA2_TC009045"]
[894,"NC_007422.5",8522535,"SNV","G","A","Homozygous",20,20,100,1,4,20,0.17,39.15,24,24,7,9,null,1,1,"no","A/A","No",1,82.49,"XP_015837678.1:c.1129G>A","XP_015837678.1:p.Glu377Lys","LOC103313648",103313648,null,"103313648 [Gene Symbol: LOC103313648] [Locus Tag: TcasGA2_TC033701] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313648] [Gene Type: protein-coding]","LOC103313648; TcasGA2_TC033701"]
[895,"NC_007422.5",8528422,"SNV","T","C","Homozygous",22,22,100,1,20,5,0.2,37.95,25,25,13,14,null,1,1,"no","C/C","No",1,86.9,"XP_015837059.1:c.3518T>C","XP_015837059.1:p.Ile1173Thr","LOC107398214",107398214,null,"107398214 [Gene Symbol: LOC107398214] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","LOC107398214"]
[896,"NC_007422.5",8628149,"SNV","A","G","Homozygous",21,21,100,1,11,13,0.46,38.86,24,24,9,16,null,1,1,"no","G/G","No",1,83.89,"XP_015837510.1:c.[2119A>G]; XP_008195639.2:c.[2119A>G]; XP_015837509.1:c.[2119A>G]; XP_015837511.1:c.[2119A>G]","XP_015837510.1:p.[Met707Val]; XP_008195639.2:p.[Met707Val]; XP_015837509.1:p.[Met707Val]; XP_015837511.1:p.[Met707Val]","LOC103313637",103313637,null,"103313637 [Gene Symbol: LOC103313637] [Locus Tag: TcasGA2_TC009820] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC103313637] [Gene Type: protein-coding]","TcasGA2_TC009820; LOC103313637"]
[897,"NC_007422.5",8628180,"SNV","A","G","Homozygous",20,20,100,1,18,11,0.38,36.8,29,29,7,12,null,1,1,"no","G/G","No",1,80.88,"XP_015837510.1:c.[2150A>G]; XP_008195639.2:c.[2150A>G]; XP_015837511.1:c.[2150A>G]; XP_015837509.1:c.[2150A>G]","XP_015837510.1:p.[Asn717Ser]; XP_008195639.2:p.[Asn717Ser]; XP_015837511.1:p.[Asn717Ser]; XP_015837509.1:p.[Asn717Ser]","LOC103313637",103313637,null,"103313637 [Gene Symbol: LOC103313637] [Locus Tag: TcasGA2_TC009820] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC103313637] [Gene Type: protein-coding]","TcasGA2_TC009820; LOC103313637"]
[898,"NC_007422.5",8628197,"SNV","C","G","Homozygous",24,24,100,1,22,9,0.29,36.08,31,31,6,16,null,1,1,"no","G/G","No",1,92.92,"XP_008195639.2:c.[2167C>G]; XP_015837511.1:c.[2167C>G]; XP_015837509.1:c.[2167C>G]; XP_015837510.1:c.[2167C>G]","XP_008195639.2:p.[Gln723Glu]; XP_015837511.1:p.[Gln723Glu]; XP_015837509.1:p.[Gln723Glu]; XP_015837510.1:p.[Gln723Glu]","LOC103313637",103313637,null,"103313637 [Gene Symbol: LOC103313637] [Locus Tag: TcasGA2_TC009820] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC103313637] [Gene Type: protein-coding]","TcasGA2_TC009820; LOC103313637"]
[899,"NC_007422.5",8628220,"SNV","G","C","Homozygous",33,33,100,1,23,20,0.47,35.94,43,43,9,18,null,1,1,"no","C/C","No",1,116.99,"XP_008195639.2:c.[2190G>C]; XP_015837510.1:c.[2190G>C]; XP_015837509.1:c.[2190G>C]; XP_015837511.1:c.[2190G>C]","XP_008195639.2:p.[Gln730His]; XP_015837510.1:p.[Gln730His]; XP_015837509.1:p.[Gln730His]; XP_015837511.1:p.[Gln730His]","LOC103313637",103313637,null,"103313637 [Gene Symbol: LOC103313637] [Locus Tag: TcasGA2_TC009820] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC103313637] [Gene Type: protein-coding]","TcasGA2_TC009820; LOC103313637"]
[900,"NC_007422.5","8628246..8628247","MNV","TT","CG","Homozygous",31,31,100,1,14,26,0.35,36.67,40,40,9,17,null,1,1,"no","CG/CG","No",1,200,"XP_008195639.2:c.[2216_2217delTTinsCG]; XP_015837511.1:c.[2216_2217delTTinsCG]; XP_015837509.1:c.[2216_2217delTTinsCG]; XP_015837510.1:c.[2216_2217delTTinsCG]","XP_008195639.2:p.[Val739Ala]; XP_015837511.1:p.[Val739Ala]; XP_015837509.1:p.[Val739Ala]; XP_015837510.1:p.[Val739Ala]","LOC103313637",103313637,null,"103313637 [Gene Symbol: LOC103313637] [Locus Tag: TcasGA2_TC009820] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC103313637] [Gene Type: protein-coding]","TcasGA2_TC009820; LOC103313637"]
[901,"NC_007422.5",8809383,"SNV","G","A","Heterozygous",23,29,79.31,0.91,20,8,0.29,36.7,28,34,9,16,-1.29,0.89,0.9,"no","A/G","No",1,10.63,"XP_008195647.1:c.704G>A","XP_008195647.1:p.Arg235Lys","LOC661430",661430,null,"661430 [Gene Symbol: LOC661430] [Locus Tag: TcasGA2_TC009831] [Chromosome: LG7] [Map Location: ] [Description: endoplasmic reticulum metallopeptidase 1] [Gene Type: protein-coding]","TcasGA2_TC009831; LOC661430"]
[902,"NC_007422.5",8945372,"SNV","T","C","Homozygous",27,27,100,1,6,25,0.19,38.41,31,31,12,15,null,1,1,"no","C/C","No",1,101.94,"XP_973509.2:c.98A>G","XP_973509.2:p.Asp33Gly","LOC662310",662310,null,"662310 [Gene Symbol: LOC662310] [Locus Tag: TcasGA2_TC008999] [Chromosome: LG7] [Map Location: ] [Description: SAYSvFN domain-containing protein 1] [Gene Type: protein-coding]","LOC662310; TcasGA2_TC008999"]
[903,"NC_007422.5",8945381,"SNV","T","C","Homozygous",28,28,100,1,8,24,0.25,37.86,32,32,13,16,null,1,1,"no","C/C","No",1,104.96,"XP_973509.2:c.89A>G","XP_973509.2:p.Asn30Ser","LOC662310",662310,null,"662310 [Gene Symbol: LOC662310] [Locus Tag: TcasGA2_TC008999] [Chromosome: LG7] [Map Location: ] [Description: SAYSvFN domain-containing protein 1] [Gene Type: protein-coding]","LOC662310; TcasGA2_TC008999"]
[904,"NC_007422.5",9049999,"SNV","A","C","Heterozygous",10,24,41.67,1,10,3,0.23,35.9,13,27,3,6,-1.2,0.09,0.59,"no","A/C","No",1,77.06,"XP_008195667.1:c.[3167A>C]; XP_008195668.1:c.[3155A>C]; XP_015837244.1:c.[3167A>C]; XP_015837245.1:c.[767A>C]; XP_008195669.1:c.[3152A>C]; XP_008195666.1:c.[3167A>C]","XP_008195667.1:p.[Asn1056Thr]; XP_008195668.1:p.[Asn1052Thr]; XP_015837244.1:p.[Asn1056Thr]; XP_015837245.1:p.[Asn256Thr]; XP_008195669.1:p.[Asn1051Thr]; XP_008195666.1:p.[Asn1056Thr]","LOC662712",662712,null,"662712 [Gene Symbol: LOC662712] [Locus Tag: TcasGA2_TC009848] [Chromosome: LG7] [Map Location: ] [Description: baculoviral IAP repeat-containing protein 6] [Gene Type: protein-coding]","TcasGA2_TC009848; LOC662712"]
[905,"NC_007422.5",9055102,"SNV","G","C","Homozygous",23,23,100,1,7,16,0.3,36.83,23,23,10,10,null,1,1,"no","C/C","No",1,89.91,"XP_008195667.1:c.[5242G>C]; XP_008195669.1:c.[5227G>C]; XP_015837244.1:c.[5242G>C]; XP_015837245.1:c.[2842G>C]; XP_008195666.1:c.[5242G>C]; XP_008195668.1:c.[5230G>C]","XP_008195667.1:p.[Ala1748Pro]; XP_008195669.1:p.[Ala1743Pro]; XP_015837244.1:p.[Ala1748Pro]; XP_015837245.1:p.[Ala948Pro]; XP_008195666.1:p.[Ala1748Pro]; XP_008195668.1:p.[Ala1744Pro]","LOC662712",662712,null,"662712 [Gene Symbol: LOC662712] [Locus Tag: TcasGA2_TC009848] [Chromosome: LG7] [Map Location: ] [Description: baculoviral IAP repeat-containing protein 6] [Gene Type: protein-coding]","TcasGA2_TC009848; LOC662712"]
[906,"NC_007422.5",9065789,"Deletion","G","-","Homozygous",29,29,100,1,15,18,0.45,37.52,33,33,11,20,null,1,1,"no","-/-","No",1,116.06,"XP_008195672.2:c.842delG","XP_008195672.2:p.Gly282fs","LOC662742",662742,null,"662742 [Gene Symbol: LOC662742] [Locus Tag: TcasGA2_TC009849] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 260] [Gene Type: protein-coding]","TcasGA2_TC009849; LOC662742"]
[907,"NC_007422.5",9083202,"SNV","G","C","Heterozygous",11,26,42.31,1,11,0,0,38.55,11,28,2,10,1.43,0.14,0.21,"no","C/G","No",1,81.55,"XP_015837247.1:c.[411C>G]; XP_008195676.1:c.[411C>G]; XP_008195675.1:c.[411C>G]; XP_015837248.1:c.[411C>G]; XP_008195674.1:c.[411C>G]","XP_015837247.1:p.[Asp137Glu]; XP_008195676.1:p.[Asp137Glu]; XP_008195675.1:p.[Asp137Glu]; XP_015837248.1:p.[Asp137Glu]; XP_008195674.1:p.[Asp137Glu]","LOC662829",662829,null,"662829 [Gene Symbol: LOC662829] [Locus Tag: TcasGA2_TC008993] [Chromosome: LG7] [Map Location: ] [Description: metastasis suppressor protein 1] [Gene Type: protein-coding]","TcasGA2_TC008993; LOC662829"]
[908,"NC_007422.5",9144198,"SNV","G","T","Heterozygous",7,21,33.33,1,7,0,0,41,7,26,1,7,2.61,0.04,0.17,"no","G/T","No",1,38.9,"XP_974159.1:c.[529C>A]; XP_015837252.1:c.[54-4359C>A]","XP_974159.1:p.Gln177Lys","LOC103313642, LOC662999","103313642 , 662999",null,"103313642 [Gene Symbol: LOC103313642] [Locus Tag: TcasGA2_TC008988] [Chromosome: LG7] [Map Location: ] [Description: homologous-pairing protein 2 homolog] [Gene Type: protein-coding] || 662999 [Gene Symbol: LOC662999] [Locus Tag: TcasGA2_TC033718] [Chromosome: LG7] [Map Location: ] [Description: glutamate--cysteine ligase regulatory subunit] [Gene Type: protein-coding]","TcasGA2_TC008988; LOC103313642 || LOC662999; TcasGA2_TC033718"]
[909,"NC_007422.5",9211035,"SNV","T","A","Homozygous",25,25,100,1,9,18,0.33,37.68,27,27,11,12,null,1,1,"no","A/A","No",1,97.53,"XP_015837254.1:c.[118A>T]; XP_015837252.1:c.[53+7386A>T]","XP_015837254.1:p.Thr40Ser","LOC103313642, LOC107398264","103313642 , 107398264",null,"103313642 [Gene Symbol: LOC103313642] [Locus Tag: TcasGA2_TC008988] [Chromosome: LG7] [Map Location: ] [Description: homologous-pairing protein 2 homolog] [Gene Type: protein-coding] || 107398264 [Gene Symbol: LOC107398264] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: phospholipid scramblase 2-like] [Gene Type: protein-coding]","TcasGA2_TC008988; LOC103313642 || LOC107398264"]
[910,"NC_007422.5",9226684,"SNV","G","T","Heterozygous",6,21,28.57,1,2,6,0.25,36.5,8,25,2,4,0.16,0.22,1,"no","G/T","No",1,26.22,"XP_974286.2:c.316C>A","XP_974286.2:p.Arg106Ser","LOC663133",663133,null,"663133 [Gene Symbol: LOC663133] [Locus Tag: TcasGA2_TC008987] [Chromosome: LG7] [Map Location: ] [Description: ATP-dependent RNA helicase Ddx1] [Gene Type: protein-coding]","LOC663133; TcasGA2_TC008987"]
[911,"NC_007422.5",9388094,"SNV","C","A","Heterozygous",10,20,50,1,2,8,0.2,36.1,10,20,5,4,-1.44,0.64,1,"no","A/C","No",1,79.53,"XP_008196036.1:c.[3098C>A]; XP_008196037.1:c.[3098C>A]","XP_008196036.1:p.[Ala1033Glu]; XP_008196037.1:p.[Ala1033Glu]","LOC103313737",103313737,null,"103313737 [Gene Symbol: LOC103313737] [Locus Tag: TcasGA2_TC008741] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313737] [Gene Type: protein-coding]","LOC103313737; TcasGA2_TC008741"]
[912,"NC_007422.5",9555002,"SNV","T","A","Homozygous",17,21,80.95,0.87,13,7,0.35,37.06,20,26,9,11,1.97,0.85,0.98,"no","A/T","No",1,8.88,"XP_015837669.1:c.[917A>T]; XP_008196029.1:c.[917A>T]","XP_015837669.1:p.[Asp306Val]; XP_008196029.1:p.[Asp306Val]","LOC664601",664601,null,"664601 [Gene Symbol: LOC664601] [Locus Tag: TcasGA2_TC010071] [Chromosome: LG7] [Map Location: ] [Description: histidine ammonia-lyase] [Gene Type: protein-coding]","LOC664601; HAL; TcasGA2_TC010071"]
[913,"NC_007422.5",9555005,"SNV","G","C","Homozygous",20,24,83.33,0.64,13,11,0.46,37.25,24,30,8,11,-0.62,0.68,1,"no","C/C","No",1,4.5,"XP_015837669.1:c.[914C>G]; XP_008196029.1:c.[914C>G]","XP_015837669.1:p.[Ala305Gly]; XP_008196029.1:p.[Ala305Gly]","LOC664601",664601,null,"664601 [Gene Symbol: LOC664601] [Locus Tag: TcasGA2_TC010071] [Chromosome: LG7] [Map Location: ] [Description: histidine ammonia-lyase] [Gene Type: protein-coding]","LOC664601; HAL; TcasGA2_TC010071"]
[914,"NC_007422.5",9610824,"SNV","A","G","Heterozygous",9,22,40.91,1,6,4,0.4,36.89,10,27,6,5,-1.27,0.6,1,"no","A/G","No",1,68.05,"XP_008196062.1:c.1049A>G","XP_008196062.1:p.Gln350Arg","LOC103313746",103313746,null,"103313746 [Gene Symbol: LOC103313746] [Locus Tag: TcasGA2_TC008761] [Chromosome: LG7] [Map Location: ] [Description: vanin-like protein 1] [Gene Type: protein-coding]","LOC103313746; TcasGA2_TC008761"]
[915,"NC_007422.5","9615718..9615720","Deletion","GTG","-","Homozygous",25,25,100,1,17,17,0.5,35.76,34,34,12,23,null,1,1,"no","-/-","No",1,200,"XP_975679.2:c.812_814delCAC","XP_975679.2:p.Pro271del","LOC664590",664590,null,"664590 [Gene Symbol: LOC664590] [Locus Tag: TcasGA2_TC010061] [Chromosome: LG7] [Map Location: ] [Description: barentsz] [Gene Type: protein-coding]","Btz; LOC664590; TcasGA2_TC010061"]
[916,"NC_007422.5",9682711,"SNV","G","A","Homozygous",19,23,82.61,0.58,14,5,0.26,35.05,19,23,6,14,-1.54,0.93,0.84,"no","A/G","No",1,3.79,"XP_015837064.1:c.136G>A","XP_015837064.1:p.Val46Ile","LOC664584",664584,null,"664584 [Gene Symbol: LOC664584] [Locus Tag: TcasGA2_TC008769] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664584] [Gene Type: protein-coding]","TcasGA2_TC008769; LOC664584"]
[917,"NC_007422.5",9690891,"SNV","C","T","Heterozygous",8,21,38.1,1,1,7,0.12,37.88,8,23,4,4,0.51,0.33,0.23,"no","C/T","No",1,56.43,"XP_015837065.1:c.1399G>A","XP_015837065.1:p.Ala467Thr","LOC664580",664580,null,"664580 [Gene Symbol: LOC664580] [Locus Tag: TcasGA2_TC010054] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664580] [Gene Type: protein-coding]","LOC664580; TcasGA2_TC010054"]
[918,"NC_007422.5",9741158,"SNV","A","T","Heterozygous",12,29,41.38,1,8,8,0.5,38.58,16,33,6,7,-1.44,0.06,0.58,"no","A/T","No",1,85.38,"XP_015837080.1:c.[1085T>A]; XP_975665.2:c.[1082T>A]","XP_015837080.1:p.[Phe362Tyr]; XP_975665.2:p.[Phe361Tyr]","LOC664576",664576,null,"664576 [Gene Symbol: LOC664576] [Locus Tag: TcasGA2_TC010051] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","LOC664576; TcasGA2_TC010051"]
[919,"NC_007422.5",9741179,"SNV","G","A","Heterozygous",15,30,50,1,7,9,0.44,38.33,16,31,6,9,-2.7,0.21,0.48,"no","A/G","No",1,118.34,"XP_015837080.1:c.[1064C>T]; XP_975665.2:c.[1061C>T]","XP_015837080.1:p.[Ser355Phe]; XP_975665.2:p.[Ser354Phe]","LOC664576",664576,null,"664576 [Gene Symbol: LOC664576] [Locus Tag: TcasGA2_TC010051] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","LOC664576; TcasGA2_TC010051"]
[920,"NC_007422.5",9815477,"SNV","C","T","Homozygous",20,24,83.33,0.57,8,12,0.4,38.1,20,24,8,7,0.66,0.95,0.94,"no","T/T","No",1,3.7,"XP_008196010.1:c.481G>A","XP_008196010.1:p.Ala161Thr","LOC664571",664571,null,"664571 [Gene Symbol: LOC664571] [Locus Tag: TcasGA2_TC010048] [Chromosome: LG7] [Map Location: ] [Description: beta-hexosaminidase subunit alpha] [Gene Type: protein-coding]","LOC664571; TcasGA2_TC010048"]
[921,"NC_007422.5",9836581,"SNV","G","A","Homozygous",20,20,100,1,15,7,0.32,37.5,22,22,12,15,null,1,1,"no","A/A","No",1,82.49,"XP_975649.1:c.338G>A","XP_975649.1:p.Ser113Asn","LOC664560",664560,null,"664560 [Gene Symbol: LOC664560] [Locus Tag: TcasGA2_TC008781] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase] [Gene Type: protein-coding]","LOC664560; TcasGA2_TC008781"]
[922,"NC_007422.5",9836841,"SNV","G","A","Homozygous",26,26,100,1,18,11,0.38,39.38,29,29,9,16,null,1,1,"no","A/A","No",1,100.54,"XP_975649.1:c.554G>A","XP_975649.1:p.Arg185Lys","LOC664560",664560,null,"664560 [Gene Symbol: LOC664560] [Locus Tag: TcasGA2_TC008781] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase] [Gene Type: protein-coding]","LOC664560; TcasGA2_TC008781"]
[923,"NC_007422.5",9837163,"SNV","G","T","Homozygous",20,20,100,1,5,20,0.2,36.55,25,25,6,5,null,1,1,"no","T/T","No",1,82.52,"XP_975649.1:c.876G>T","XP_975649.1:p.Leu292Phe","LOC664560",664560,null,"664560 [Gene Symbol: LOC664560] [Locus Tag: TcasGA2_TC008781] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase] [Gene Type: protein-coding]","LOC664560; TcasGA2_TC008781"]
[924,"NC_007422.5","9848887^9848888","Insertion","-","C","Heterozygous",8,21,38.1,1,5,6,0.45,38.25,11,31,3,6,1.34,0.09,0.9,"no","-/C","No",1,59.38,"XP_015837067.1:c.1192_1193insC","XP_015837067.1:p.Val399fs","LOC664550",664550,null,"664550 [Gene Symbol: LOC664550] [Locus Tag: TcasGA2_TC033817] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664550] [Gene Type: protein-coding]","TcasGA2_TC033817; LOC664550"]
[925,"NC_007422.5",9878505,"SNV","A","C","Homozygous",19,23,82.61,0.75,4,18,0.18,36.79,22,26,8,7,-1.74,0.84,1,"no","C/C","No",1,6.03,"XP_008196000.1:c.1122T>G","XP_008196000.1:p.Cys374Trp","LOC664536",664536,null,"664536 [Gene Symbol: LOC664536] [Locus Tag: TcasGA2_TC010044] [Chromosome: LG7] [Map Location: ] [Description: alanine--tRNA ligase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC010044; LOC664536"]
[926,"NC_007422.5",9900997,"SNV","T","C","Homozygous",32,32,100,1,19,20,0.49,37.88,39,39,10,13,null,1,1,"no","C/C","No",1,117,"XP_008195998.1:c.[824T>C]; XP_008195997.1:c.[824T>C]","XP_008195998.1:p.[Val275Ala]; XP_008195997.1:p.[Val275Ala]","LOC100141526",100141526,null,"100141526 [Gene Symbol: LOC100141526] [Locus Tag: TcasGA2_TC008788] [Chromosome: LG7] [Map Location: ] [Description: protein mothers against dpp] [Gene Type: protein-coding]","SMADx; LOC100141526; TcasGA2_TC008788"]
[927,"NC_007422.5",9954608,"SNV","G","T","Homozygous",23,23,100,1,9,18,0.33,37.91,27,27,13,15,null,1,1,"no","T/T","No",1,91.55,"XP_975608.1:c.766C>A","XP_975608.1:p.Gln256Lys","LOC664516",664516,null,"664516 [Gene Symbol: LOC664516] [Locus Tag: TcasGA2_TC010035] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase] [Gene Type: protein-coding]","LOC664516; TcasGA2_TC010035"]
[928,"NC_007422.5",10080752,"SNV","T","C","Homozygous",23,23,100,1,12,15,0.44,37.96,27,27,14,10,null,1,1,"no","C/C","No",1,89.91,"XP_015837683.1:c.1321T>C","XP_015837683.1:p.Tyr441His","LOC664474",664474,null,"664474 [Gene Symbol: LOC664474] [Locus Tag: TcasGA2_TC008804] [Chromosome: LG7] [Map Location: ] [Description: UDP-glucuronosyltransferase 2B20] [Gene Type: protein-coding]","LOC664474; TcasGA2_TC008804"]
[929,"NC_007422.5",10082125,"SNV","G","A","Heterozygous",12,29,41.38,1,8,4,0.33,36.5,12,44,3,8,0.73,0.05,0.93,"no","A/G","No",1,87.97,"XP_008195974.1:c.[637G>A]; XP_008195975.1:c.[637G>A]","XP_008195974.1:p.[Ala213Thr]; XP_008195975.1:p.[Ala213Thr]","LOC103313721",103313721,null,"103313721 [Gene Symbol: LOC103313721] [Locus Tag: TcasGA2_TC033804] [Chromosome: LG7] [Map Location: ] [Description: macoilin-2-like] [Gene Type: protein-coding]","LOC103313721; TcasGA2_TC033804"]
[930,"NC_007422.5",10105082,"SNV","T","A","Heterozygous",5,23,21.74,0.95,5,0,0,39.4,5,23,1,4,-1.19,0.06,0.67,"no","A/T","No",1,12.87,"XP_015837642.1:c.[585A>T]; XP_015837641.1:c.[585A>T]; XP_975566.1:c.[585A>T]; XP_008195969.1:c.[510A>T]","XP_015837642.1:p.[Gln195His]; XP_015837641.1:p.[Gln195His]; XP_975566.1:p.[Gln195His]; XP_008195969.1:p.[Gln170His]","LOC664468",664468,null,"664468 [Gene Symbol: LOC664468] [Locus Tag: TcasGA2_TC010021] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664468] [Gene Type: protein-coding]","LOC664468; TcasGA2_TC010021"]
[931,"NC_007422.5",10105089,"SNV","A","G","Heterozygous",5,22,22.73,0.98,5,0,0,40.8,5,22,1,4,2.55,0.39,0.66,"no","A/G","No",1,17.09,"XP_015837642.1:c.[578T>C]; XP_015837641.1:c.[578T>C]; XP_008195969.1:c.[503T>C]; XP_975566.1:c.[578T>C]","XP_015837642.1:p.[Leu193Pro]; XP_015837641.1:p.[Leu193Pro]; XP_008195969.1:p.[Leu168Pro]; XP_975566.1:p.[Leu193Pro]","LOC664468",664468,null,"664468 [Gene Symbol: LOC664468] [Locus Tag: TcasGA2_TC010021] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664468] [Gene Type: protein-coding]","LOC664468; TcasGA2_TC010021"]
[932,"NC_007422.5",10407346,"SNV","C","G","Homozygous",20,22,90.91,0.99,5,15,0.25,38.3,20,23,9,13,null,0.97,0.99,"no","G/G","No",1,22.89,"XP_975547.1:c.[1814C>G]; XP_015837353.1:c.[1814C>G]","XP_975547.1:p.[Thr605Ser]; XP_015837353.1:p.[Thr605Ser]","LOC664448",664448,null,"664448 [Gene Symbol: LOC664448] [Locus Tag: TcasGA2_TC008820] [Chromosome: LG7] [Map Location: ] [Description: DNA repair protein complementing XP-C cells homolog] [Gene Type: protein-coding]","LOC664448; TcasGA2_TC008820"]
[933,"NC_007422.5",10536122,"SNV","G","A","Heterozygous",10,22,45.45,1,6,4,0.4,39.9,10,25,3,5,2.93,0.03,1,"no","A/G","No",1,79.12,"XP_008195941.1:c.2092C>T","XP_008195941.1:p.Leu698Phe","LOC103313715",103313715,null,"103313715 [Gene Symbol: LOC103313715] [Locus Tag: TcasGA2_TC009999] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313715] [Gene Type: protein-coding]","TcasGA2_TC009999; LOC103313715"]
[934,"NC_007422.5",10536788,"SNV","G","A","Heterozygous",8,24,33.33,1,3,8,0.27,39.12,11,29,3,3,2.63,0.09,0.17,"no","A/G","No",1,48.13,"XP_008195941.1:c.1426C>T","XP_008195941.1:p.Pro476Ser","LOC103313715",103313715,null,"103313715 [Gene Symbol: LOC103313715] [Locus Tag: TcasGA2_TC009999] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313715] [Gene Type: protein-coding]","TcasGA2_TC009999; LOC103313715"]
[935,"NC_007422.5",10742567,"SNV","G","T","Heterozygous",14,22,63.64,1,4,10,0.29,36.93,14,23,7,7,-0.34,0.9,1,"no","G/T","No",1,56.73,"XP_008195898.1:c.[1139G>T]; XP_008195897.1:c.[1139G>T]","XP_008195898.1:p.[Arg380Leu]; XP_008195897.1:p.[Arg380Leu]","LOC664307",664307,null,"664307 [Gene Symbol: LOC664307] [Locus Tag: TcasGA2_TC031208] [Chromosome: LG7] [Map Location: ] [Description: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase] [Gene Type: protein-coding]","TcasGA2_TC031208; LOC664307"]
[936,"NC_007422.5",10742822,"SNV","G","A","Heterozygous",7,21,33.33,1,7,0,0,40.43,7,24,2,3,0.93,0.09,0.18,"no","A/G","No",1,43.69,"XP_008195897.1:c.[1394G>A]; XP_008195898.1:c.[1394G>A]","XP_008195897.1:p.[Ser465Asn]; XP_008195898.1:p.[Ser465Asn]","LOC664307",664307,null,"664307 [Gene Symbol: LOC664307] [Locus Tag: TcasGA2_TC031208] [Chromosome: LG7] [Map Location: ] [Description: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase] [Gene Type: protein-coding]","TcasGA2_TC031208; LOC664307"]
[937,"NC_007422.5",11286224,"SNV","G","A","Homozygous",21,21,100,1,7,15,0.32,37.81,22,22,9,10,null,1,1,"no","A/A","No",1,85.5,"XP_015837280.1:c.766G>A","XP_015837280.1:p.Val256Ile","LOC663974",663974,null,"663974 [Gene Symbol: LOC663974] [Locus Tag: TcasGA2_TC008879] [Chromosome: LG7] [Map Location: ] [Description: origin recognition complex subunit 1] [Gene Type: protein-coding]","LOC663974; TcasGA2_TC008879"]
[938,"NC_007422.5",11445086,"SNV","C","T","Homozygous",24,24,100,1,12,14,0.46,37.12,26,26,13,16,null,1,1,"no","T/T","No",1,91.55,"XP_974907.2:c.688G>A","XP_974907.2:p.Ala230Thr","LOC663779",663779,null,"663779 [Gene Symbol: LOC663779] [Locus Tag: TcasGA2_TC009947] [Chromosome: LG7] [Map Location: ] [Description: armadillo repeat-containing protein 6 homolog] [Gene Type: protein-coding]","TcasGA2_TC009947; LOC663779"]
[939,"NC_007422.5",11471336,"SNV","T","C","Homozygous",26,26,100,1,18,13,0.42,37.88,31,31,6,14,null,1,1,"no","C/C","No",1,98.94,"XP_015837215.1:c.[4517A>G]; XP_015837228.1:c.[4367A>G]; XP_015837226.1:c.[4418A>G]; XP_015837219.1:c.[4475A>G]; XP_008195842.1:c.[4412A>G]; XP_015837222.1:c.[4448A>G]; XP_015837220.1:c.[4460A>G]; XP_015837221.1:c.[4454A>G]; XP_015837229.1:c.[4337-343A>G]; XP_015837217.1:c.[4511A>G]; XP_008195841.1:c.[4469A>G]; XP_015837218.1:c.[4481A>G]; XP_015837227.1:c.[4403A>G]; XP_015837224.1:c.[4439A>G]; XP_015837223.1:c.[4445A>G]; XP_008195840.1:c.[4475A>G]","XP_015837215.1:p.[His1506Arg]; XP_015837228.1:p.[His1456Arg]; XP_015837226.1:p.[His1473Arg]; XP_015837219.1:p.[His1492Arg]; XP_008195842.1:p.[His1471Arg]; XP_015837222.1:p.[His1483Arg]; XP_015837220.1:p.[His1487Arg]; XP_015837221.1:p.[His1485Arg]; XP_015837217.1:p.[His1504Arg]; XP_008195841.1:p.[His1490Arg]; XP_015837218.1:p.[His1494Arg]; XP_015837227.1:p.[His1468Arg]; XP_015837224.1:p.[His1480Arg]; XP_015837223.1:p.[His1482Arg]; XP_008195840.1:p.[His1492Arg]","LOC663729",663729,null,"663729 [Gene Symbol: LOC663729] [Locus Tag: TcasGA2_TC009942] [Chromosome: LG7] [Map Location: ] [Description: transient receptor potential cation channel, subfamily M] [Gene Type: protein-coding]","TcasGA2_TC009942; GLEAN_09943; TRPM; LOC663729"]
[940,"NC_007422.5",11677449,"SNV","A","C","Homozygous",21,21,100,1,19,7,0.27,34.9,26,26,7,12,null,1,1,"no","C/C","No",1,83.89,"XP_008195826.1:c.2442A>C","XP_008195826.1:p.Glu814Asp","LOC103313687, LOC663405","103313687 , 663405",null,"103313687 [Gene Symbol: LOC103313687] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313687] [Gene Type: ncRNA] || 663405 [Gene Symbol: LOC663405] [Locus Tag: TcasGA2_TC008910] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313687 || TcasGA2_TC008910; LOC663405"]
[941,"NC_007422.5",11764855,"SNV","A","T","Homozygous",20,20,100,1,6,19,0.24,38.65,25,25,6,9,null,1,1,"no","T/T","No",1,82.52,"XP_008195808.1:c.1095T>A","XP_008195808.1:p.Asn365Lys","LOC663232",663232,null,"663232 [Gene Symbol: LOC663232] [Locus Tag: TcasGA2_TC009925] [Chromosome: LG7] [Map Location: ] [Description: rho GTPase-activating protein 11A] [Gene Type: protein-coding]","LOC663232; TcasGA2_TC009925"]
[942,"NC_007422.5",11799985,"SNV","C","A","Heterozygous",8,23,34.78,1,8,0,0,33.25,8,23,1,8,-2.32,0.02,0.01,"no","A/C","No",1,46.31,"XP_015837054.1:c.[40-13973G>T]; NP_001164083.1:c.[78G>T]; XP_008195711.1:c.[78G>T]; XP_008195712.1:c.[61-13973G>T]","NP_001164083.1:p.[Lys26Asn]; XP_008195711.1:p.[Lys26Asn]","AP-2",663046,"transcription factor AP-2","663046 [Gene Symbol: AP-2] [Locus Tag: TcasGA2_TC009922] [Chromosome: LG7] [Map Location: ] [Description: transcription factor AP-2] [Gene Type: protein-coding]","AP-2; TcasGA2_TC009922"]
[943,"NC_007422.5",11897462,"SNV","G","A","Homozygous",30,30,100,1,11,23,0.32,35,34,34,13,21,null,1,1,"no","A/A","No",1,109.57,"XP_015837300.1:c.[3424C>T]; XP_008195801.1:c.[3424C>T]","XP_015837300.1:p.[Pro1142Ser]; XP_008195801.1:p.[Pro1142Ser]","LOC103313681",103313681,null,"103313681 [Gene Symbol: LOC103313681] [Locus Tag: TcasGA2_TC009918] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313681] [Gene Type: protein-coding]","LOC103313681; TcasGA2_TC009918"]
[944,"NC_007422.5",11910806,"SNV","A","G","Homozygous",22,22,100,1,12,10,0.45,39.09,22,22,6,14,null,1,1,"no","G/G","No",1,86.9,"XP_015837305.1:c.[1777A>G]; XP_008195796.1:c.[1777A>G]","XP_015837305.1:p.[Ile593Val]; XP_008195796.1:p.[Ile593Val]","LOC103313680",103313680,null,"103313680 [Gene Symbol: LOC103313680] [Locus Tag: TcasGA2_TC008920] [Chromosome: LG7] [Map Location: ] [Description: RNA polymerase II degradation factor 1] [Gene Type: protein-coding]","TcasGA2_TC008920; LOC103313680"]
[945,"NC_007422.5",11910963,"SNV","G","A","Heterozygous",15,21,71.43,1,6,10,0.38,39.16,16,22,6,14,null,0.73,0.97,"no","complex","No",1,200,"XP_008195796.1:c.[1934G>A]; XP_015837305.1:c.[1934G>A]","XP_008195796.1:p.[Gly645Asp]; XP_015837305.1:p.[Gly645Asp]","LOC103313680",103313680,null,"103313680 [Gene Symbol: LOC103313680] [Locus Tag: TcasGA2_TC008920] [Chromosome: LG7] [Map Location: ] [Description: RNA polymerase II degradation factor 1] [Gene Type: protein-coding]","TcasGA2_TC008920; LOC103313680"]
[946,"NC_007422.5","11910963..11910964","MNV","GT","AC","Heterozygous",6,21,28.57,1,1,5,0.17,37.52,6,22,1,2,null,0.17,0.66,"no","complex","No",1,200,"XP_015837305.1:c.[1934_1935delGTinsAC]; XP_008195796.1:c.[1934_1935delGTinsAC]","XP_015837305.1:p.[Gly645Asp]; XP_008195796.1:p.[Gly645Asp]","LOC103313680",103313680,null,"103313680 [Gene Symbol: LOC103313680] [Locus Tag: TcasGA2_TC008920] [Chromosome: LG7] [Map Location: ] [Description: RNA polymerase II degradation factor 1] [Gene Type: protein-coding]","TcasGA2_TC008920; LOC103313680"]
[947,"NC_007422.5",11950759,"SNV","A","G","Homozygous",22,22,100,1,4,21,0.16,37.23,25,25,6,8,null,1,1,"no","G/G","No",1,86.9,"XP_008195789.1:c.4927A>G","XP_008195789.1:p.Thr1643Ala","LOC662516",662516,null,"662516 [Gene Symbol: LOC662516] [Locus Tag: TcasGA2_TC008923] [Chromosome: LG7] [Map Location: ] [Description: myosin 22] [Gene Type: protein-coding]","TcasGA2_TC008923; LOC662516; Myo22"]
[948,"NC_007422.5",12722596,"SNV","A","T","Heterozygous",16,20,80,0.87,5,14,0.26,36.69,19,23,9,9,0.71,0.74,0.95,"no","A/T","No",1,8.83,"XP_008196042.1:c.54T>A","XP_008196042.1:p.Asn18Lys","LOC660426",660426,null,"660426 [Gene Symbol: LOC660426] [Locus Tag: TcasGA2_TC009883] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase] [Gene Type: protein-coding]","TcasGA2_TC009883; LOC660426"]
[949,"NC_007422.5",12722607,"SNV","C","T","Heterozygous",16,21,76.19,0.99,4,14,0.22,38.19,18,23,8,10,1.32,0.75,0.94,"no","C/T","No",1,19.84,"XP_008196042.1:c.43G>A","XP_008196042.1:p.Gly15Ser","LOC660426",660426,null,"660426 [Gene Symbol: LOC660426] [Locus Tag: TcasGA2_TC009883] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase] [Gene Type: protein-coding]","TcasGA2_TC009883; LOC660426"]
[950,"NC_007422.5",12827413,"SNV","T","C","Homozygous",25,31,80.65,0.68,24,5,0.17,39.4,29,35,7,18,3.15,0.17,0.62,"no","C/T","No",1,4.91,"XP_008195733.1:c.[2410+852T>C]; XP_966333.1:c.[629A>G]; XP_008195734.1:c.[2371+852T>C]; XP_008195732.1:c.[2440+852T>C]; XP_008195731.1:c.[2440+852T>C]; XP_008195735.1:c.[2275+1273T>C]","XP_966333.1:p.His210Arg","LOC658806, LOC655652","658806 , 655652",null,"658806 [Gene Symbol: LOC658806] [Locus Tag: TcasGA2_TC008972] [Chromosome: LG7] [Map Location: ] [Description: WD repeat-containing protein 7] [Gene Type: protein-coding] || 655652 [Gene Symbol: LOC655652] [Locus Tag: TcasGA2_TC009873] [Chromosome: LG7] [Map Location: ] [Description: cuticle protein 7] [Gene Type: protein-coding]","TcasGA2_TC008972; LOC658806 || LOC655652; TcasGA2_TC009873"]
[951,"NC_007422.5",12875491,"SNV","T","C","Heterozygous",17,26,65.38,1,9,9,0.5,37.06,18,27,8,11,1.27,0.11,0.73,"no","C/T","No",1,55.3,"XP_008195718.1:c.[628A>G]; XP_015837687.1:c.[628A>G]","XP_008195718.1:p.[Thr210Ala]; XP_015837687.1:p.[Thr210Ala]","LOC657893",657893,null,"657893 [Gene Symbol: LOC657893] [Locus Tag: TcasGA2_TC009867] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC657893] [Gene Type: protein-coding]","TcasGA2_TC009867; LOC657893"]
[952,"NC_007422.5",13007392,"SNV","A","C","Homozygous",21,21,100,1,18,3,0.14,38.52,21,21,7,15,null,1,1,"no","C/C","No",1,83.89,"XP_969124.4:c.[78A>C]; XP_015837664.1:c.[42A>C]","XP_969124.4:p.[Arg26Ser]","LOC657579",657579,null,"657579 [Gene Symbol: LOC657579] [Locus Tag: TcasGA2_TC008981] [Chromosome: LG7] [Map Location: ] [Description: ATPase inhibitor, mitochondrial] [Gene Type: protein-coding]","LOC657579; TcasGA2_TC008981"]
[953,"NC_007422.5",13119932,"SNV","A","G","Heterozygous",9,21,42.86,1,5,5,0.5,38.44,10,22,4,5,1.24,0.33,1,"no","A/G","No",1,70.85,"XP_015837396.1:c.[4996T>C]; XP_015837404.1:c.[4963T>C]; XP_015837401.1:c.[4978T>C]; XP_015837397.1:c.[4993T>C]; XP_015837406.1:c.[4945T>C]; XP_015837410.1:c.[4147T>C]; XP_015837409.1:c.[4156T>C]; XP_015837400.1:c.[4987T>C]; XP_015837402.1:c.[4975T>C]; XP_015837399.1:c.[4990T>C]; XP_015837394.1:c.[5002T>C]; XP_015837403.1:c.[4975T>C]; XP_015837393.1:c.[5005T>C]; XP_015837408.1:c.[4198T>C]; XP_015837395.1:c.[4996T>C]; XP_015837398.1:c.[4990T>C]; XP_015837405.1:c.[4957T>C]","XP_015837396.1:p.[Ser1666Pro]; XP_015837404.1:p.[Ser1655Pro]; XP_015837401.1:p.[Ser1660Pro]; XP_015837397.1:p.[Ser1665Pro]; XP_015837406.1:p.[Ser1649Pro]; XP_015837410.1:p.[Ser1383Pro]; XP_015837409.1:p.[Ser1386Pro]; XP_015837400.1:p.[Ser1663Pro]; XP_015837402.1:p.[Ser1659Pro]; XP_015837399.1:p.[Ser1664Pro]; XP_015837394.1:p.[Ser1668Pro]; XP_015837403.1:p.[Ser1659Pro]; XP_015837393.1:p.[Ser1669Pro]; XP_015837408.1:p.[Ser1400Pro]; XP_015837395.1:p.[Ser1666Pro]; XP_015837398.1:p.[Ser1664Pro]; XP_015837405.1:p.[Ser1653Pro]","LOC663934",663934,null,"663934 [Gene Symbol: LOC663934] [Locus Tag: TcasGA2_TC010200] [Chromosome: LG7] [Map Location: ] [Description: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2] [Gene Type: protein-coding]","TcasGA2_TC010200; LOC663934"]
[954,"NC_007422.5","13187283^13187284","Insertion","-","G","Heterozygous",4,20,20,0.92,0,4,0,39,4,20,1,1,0,0.33,0.38,"no","-/G","No",1,10.73,"XP_008196421.1:c.[967_968insG]; XP_008196417.1:c.[988_989insG]; XP_008196422.1:c.[907_908insG]; XP_015837164.1:c.[913_914insG]; XP_008196420.1:c.[967_968insG]; XP_015837163.1:c.[988_989insG]; XP_008196424.1:c.[886_887insG]; XP_008196419.1:c.[988_989insG]; XP_008196418.1:c.[988_989insG]; XP_008196425.1:c.[886_887insG]; XP_008196423.1:c.[886_887insG]","XP_008196421.1:p.[Phe323fs]; XP_008196417.1:p.[Phe330fs]; XP_008196422.1:p.[Phe303fs]; XP_015837164.1:p.[Phe305fs]; XP_008196420.1:p.[Phe323fs]; XP_015837163.1:p.[Phe330fs]; XP_008196424.1:p.[Phe296fs]; XP_008196419.1:p.[Phe330fs]; XP_008196418.1:p.[Phe330fs]; XP_008196425.1:p.[Phe296fs]; XP_008196423.1:p.[Phe296fs]","LOC663833",663833,null,"663833 [Gene Symbol: LOC663833] [Locus Tag: TcasGA2_TC008619] [Chromosome: LG7] [Map Location: ] [Description: sodium/potassium-transporting ATPase subunit alpha] [Gene Type: protein-coding]","TcasGA2_TC008619; LOC663833"]
[955,"NC_007422.5",13198303,"SNV","A","T","Heterozygous",16,20,80,0.87,12,11,0.48,35.69,23,27,9,9,-0.9,0.96,1,"no","A/T","No",1,8.83,"XP_008196416.1:c.6311T>A","XP_008196416.1:p.Leu2104*","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[956,"NC_007422.5",13198920,"SNV","T","C","Homozygous",21,21,100,1,10,11,0.48,38.71,21,21,10,15,null,1,1,"no","C/C","No",1,83.89,"XP_008196416.1:c.5781A>G","XP_008196416.1:p.Ile1927Met","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[957,"NC_007422.5",13198930,"SNV","T","C","Heterozygous",8,28,28.57,1,3,5,0.38,39.62,8,28,3,5,1.93,0.19,1,"no","C/T","No",1,38.63,"XP_008196416.1:c.5771A>G","XP_008196416.1:p.Asn1924Ser","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[958,"NC_007422.5",13203978,"SNV","G","C","Heterozygous",8,22,36.36,1,8,0,0,37,8,22,4,4,-0.65,0.44,0.42,"no","C/G","No",1,54.37,"XP_008196416.1:c.1325C>G","XP_008196416.1:p.Pro442Arg","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[959,"NC_007422.5",13203987,"SNV","A","G","Heterozygous",10,23,43.48,1,9,1,0.1,37.7,10,23,5,6,-0.65,0.38,0.58,"no","A/G","No",1,78.06,"XP_008196416.1:c.1316T>C","XP_008196416.1:p.Leu439Pro","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[960,"NC_007422.5",13203999,"SNV","C","T","Heterozygous",9,20,45,1,7,2,0.22,35.22,9,20,4,6,-3.46,0.84,0.78,"no","C/T","No",1,72.08,"XP_008196416.1:c.1304G>A","XP_008196416.1:p.Trp435*","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[961,"NC_007422.5",13644220,"SNV","C","T","Homozygous",23,23,100,1,12,13,0.48,35.7,25,25,8,12,null,1,1,"no","T/T","No",1,91.55,"XP_974442.1:c.[913G>A]; XP_008196394.1:c.[1865+1453C>T]","XP_974442.1:p.Glu305Lys","LOC663273, LOC663293","663273 , 663293",null,"663273 [Gene Symbol: LOC663273] [Locus Tag: TcasGA2_TC008647] [Chromosome: LG7] [Map Location: ] [Description: tyrosine-protein kinase hopscotch] [Gene Type: protein-coding] || 663293 [Gene Symbol: LOC663293] [Locus Tag: TcasGA2_TC010172] [Chromosome: LG7] [Map Location: ] [Description: heat shock protein 70 A1] [Gene Type: protein-coding]","hopscotch; Hop; LOC663273; TcasGA2_TC008647 || TcasGA2_TC010172; LOC663293"]
[962,"NC_007422.5",13654045,"SNV","G","C","Homozygous",22,22,100,1,6,17,0.26,36.95,23,23,13,12,null,1,1,"no","C/C","No",1,86.9,"XP_008196389.1:c.2237C>G","XP_008196389.1:p.Thr746Ser","LOC663208",663208,null,"663208 [Gene Symbol: LOC663208] [Locus Tag: TcasGA2_TC033847] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase-like] [Gene Type: protein-coding]","TcasGA2_TC033847; LOC663208"]
[963,"NC_007422.5",13655290,"SNV","T","C","Homozygous",22,22,100,1,17,8,0.32,33.86,25,25,8,14,null,1,1,"no","C/C","No",1,86.89,"XP_008196389.1:c.1129A>G","XP_008196389.1:p.Ile377Val","LOC663208",663208,null,"663208 [Gene Symbol: LOC663208] [Locus Tag: TcasGA2_TC033847] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase-like] [Gene Type: protein-coding]","TcasGA2_TC033847; LOC663208"]
[964,"NC_007422.5",13711671,"SNV","A","G","Homozygous",21,21,100,1,7,14,0.33,37.48,21,21,10,10,null,1,1,"no","G/G","No",1,83.89,"XP_015837075.1:c.[2200-42A>G]; XP_015837475.1:c.[223T>C]","XP_015837475.1:p.Ser75Pro","LOC662737, LOC107398307","662737 , 107398307",null,"662737 [Gene Symbol: LOC662737] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC662737] [Gene Type: protein-coding] || 107398307 [Gene Symbol: LOC107398307] [Locus Tag: TcasGA2_TC033850] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398307] [Gene Type: protein-coding]","LOC662737 || LOC107398307; TcasGA2_TC033850"]
[965,"NC_007422.5",13779911,"SNV","C","A","Heterozygous",6,26,23.08,0.95,0,6,0,34.67,6,26,3,2,-2.04,0.05,0.09,"no","A/C","No",1,12.68,"XP_008196372.1:c.[283C>A]; XP_973734.1:c.[265C>A]","XP_008196372.1:p.[Leu95Ile]; XP_973734.1:p.[Leu89Ile]","LOC662551",662551,null,"662551 [Gene Symbol: LOC662551] [Locus Tag: TcasGA2_TC008661] [Chromosome: LG7] [Map Location: ] [Description: myosin-2 essential light chain] [Gene Type: protein-coding]","TcasGA2_TC008661; LOC662551"]
[966,"NC_007422.5",13824258,"SNV","G","A","Homozygous",25,25,100,1,11,21,0.34,36.2,32,32,11,14,null,1,1,"no","A/A","No",1,97.54,"XP_015837123.1:c.1165C>T","XP_015837123.1:p.His389Tyr","LOC662160, LOC662089","662160 , 662089",null,"662160 [Gene Symbol: LOC662160] [Locus Tag: TcasGA2_TC008670] [Chromosome: LG7] [Map Location: ] [Description: TIMELESS-interacting protein] [Gene Type: protein-coding] || 662089 [Gene Symbol: LOC662089] [Locus Tag: TcasGA2_TC010158] [Chromosome: LG7] [Map Location: ] [Description: facilitated trehalose transporter Tret1-2 homolog] [Gene Type: protein-coding]","LOC662160; TcasGA2_TC008670 || TcasGA2_TC010158; LOC662089"]
[967,"NC_007422.5",13825289,"SNV","C","T","Heterozygous",6,25,24,0.99,0,6,0,35,6,26,1,1,-0.38,0.12,0.09,"no","C/T","No",1,19.98,"XP_015837123.1:c.134G>A","XP_015837123.1:p.Gly45Asp","LOC662160, LOC662089","662160 , 662089",null,"662160 [Gene Symbol: LOC662160] [Locus Tag: TcasGA2_TC008670] [Chromosome: LG7] [Map Location: ] [Description: TIMELESS-interacting protein] [Gene Type: protein-coding] || 662089 [Gene Symbol: LOC662089] [Locus Tag: TcasGA2_TC010158] [Chromosome: LG7] [Map Location: ] [Description: facilitated trehalose transporter Tret1-2 homolog] [Gene Type: protein-coding]","LOC662160; TcasGA2_TC008670 || TcasGA2_TC010158; LOC662089"]
[968,"NC_007422.5",13924221,"SNV","G","A","Homozygous",23,23,100,1,11,14,0.44,36.91,25,25,11,12,null,1,1,"no","A/A","No",1,91.52,"XP_008196345.1:c.250G>A","XP_008196345.1:p.Val84Ile","LOC661730",661730,null,"661730 [Gene Symbol: LOC661730] [Locus Tag: TcasGA2_TC008673] [Chromosome: LG7] [Map Location: ] [Description: dipeptidyl peptidase 3] [Gene Type: protein-coding]","LOC661730; TcasGA2_TC008673"]
[969,"NC_007422.5",13926622,"SNV","G","A","Homozygous",25,25,100,1,12,13,0.48,36.88,25,25,12,15,null,1,1,"no","A/A","No",1,97.54,"XP_008196345.1:c.2003G>A","XP_008196345.1:p.Gly668Glu","LOC661730",661730,null,"661730 [Gene Symbol: LOC661730] [Locus Tag: TcasGA2_TC008673] [Chromosome: LG7] [Map Location: ] [Description: dipeptidyl peptidase 3] [Gene Type: protein-coding]","LOC661730; TcasGA2_TC008673"]
[970,"NC_007422.5",13937119,"SNV","G","A","Homozygous",20,20,100,1,4,16,0.2,36.95,20,20,8,9,null,1,1,"no","A/A","No",1,82.49,"XP_008196342.2:c.[869C>T]; XP_015837439.1:c.[1121C>T]","XP_008196342.2:p.[Thr290Met]; XP_015837439.1:p.[Thr374Met]","LOC661511",661511,null,"661511 [Gene Symbol: LOC661511] [Locus Tag: TcasGA2_TC010152] [Chromosome: LG7] [Map Location: ] [Description: UDP-glucuronosyltransferase 1-9] [Gene Type: protein-coding]","TcasGA2_TC010152; LOC661511"]
[971,"NC_007422.5",13953393,"SNV","C","T","Homozygous",25,25,100,1,12,17,0.41,38.48,29,29,11,16,null,1,1,"no","T/T","No",1,97.56,"XP_008196340.1:c.1288G>A","XP_008196340.1:p.Val430Met","LOC661106",661106,null,"661106 [Gene Symbol: LOC661106] [Locus Tag: TcasGA2_TC010150] [Chromosome: LG7] [Map Location: ] [Description: bromodomain-containing protein 8] [Gene Type: protein-coding]","TcasGA2_TC010150; LOC661106"]
[972,"NC_007422.5",13961736,"SNV","C","A","Heterozygous",6,21,28.57,1,0,6,0,34.33,6,25,1,2,-1.87,0.74,0.65,"no","A/C","No",1,26.33,"XP_015837523.1:c.[1844G>T]; XP_015837525.1:c.[1787G>T]; XP_015837529.1:c.[1886G>T]; XP_015837532.1:c.[1469G>T]; XP_015837522.1:c.[1880G>T]; XP_015837524.1:c.[1823G>T]; XP_015837527.1:c.[1787G>T]; XP_015837530.1:c.[1886G>T]; XP_015837531.1:c.[1469G>T]; XP_015837519.1:c.[1880G>T]; XP_015837521.1:c.[1886G>T]; XP_015837520.1:c.[1880G>T]; XP_015837518.1:c.[1886G>T]; XP_015837528.1:c.[1781G>T]; XP_015837526.1:c.[1781G>T]","XP_015837523.1:p.[Gly615Val]; XP_015837525.1:p.[Gly596Val]; XP_015837529.1:p.[Gly629Val]; XP_015837532.1:p.[Gly490Val]; XP_015837522.1:p.[Gly627Val]; XP_015837524.1:p.[Gly608Val]; XP_015837527.1:p.[Gly596Val]; XP_015837530.1:p.[Gly629Val]; XP_015837531.1:p.[Gly490Val]; XP_015837519.1:p.[Gly627Val]; XP_015837521.1:p.[Gly629Val]; XP_015837520.1:p.[Gly627Val]; XP_015837518.1:p.[Gly629Val]; XP_015837528.1:p.[Gly594Val]; XP_015837526.1:p.[Gly594Val]","LOC659555",659555,null,"659555 [Gene Symbol: LOC659555] [Locus Tag: TcasGA2_TC010147] [Chromosome: LG7] [Map Location: ] [Description: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2] [Gene Type: protein-coding]","TcasGA2_TC010147; LOC659555"]
[973,"NC_007422.5",14033230,"SNV","T","A","Homozygous",24,24,100,1,19,12,0.39,38.08,31,31,11,15,null,1,1,"no","A/A","No",1,94.52,"XP_972129.2:c.374A>T","XP_972129.2:p.Tyr125Phe","LOC660833",660833,null,"660833 [Gene Symbol: LOC660833] [Locus Tag: TcasGA2_TC030761] [Chromosome: LG7] [Map Location: ] [Description: fukutin-related protein] [Gene Type: protein-coding]","LOC660833; TcasGA2_TC030761"]
[974,"NC_007422.5",14165159,"SNV","C","A","Homozygous",21,21,100,1,19,3,0.14,38.95,22,22,7,14,null,1,1,"no","A/A","No",1,85.49,"XP_008196326.1:c.[1495C>A]; XP_008196325.1:c.[1501C>A]","XP_008196326.1:p.[Pro499Thr]; XP_008196325.1:p.[Pro501Thr]","LOC660367",660367,null,"660367 [Gene Symbol: LOC660367] [Locus Tag: TcasGA2_TC008693] [Chromosome: LG7] [Map Location: ] [Description: AT-rich interactive domain-containing protein 4B] [Gene Type: protein-coding]","LOC660367; TcasGA2_TC008693"]
[975,"NC_007422.5",15079692,"SNV","C","A","Heterozygous",5,22,22.73,0.92,3,4,0.43,34.2,7,25,2,2,-1.29,0.6,0.84,"no","A/C","No",1,11.16,"XP_015837576.1:c.[1954C>A]; XP_008196277.1:c.[2122C>A]; XP_015837566.1:c.[2134C>A]; XP_015837571.1:c.[2035C>A]; XP_015837573.1:c.[2017C>A]; XP_015837575.1:c.[2017C>A]; XP_015837572.1:c.[2017C>A]; XP_015837570.1:c.[2047C>A]; XP_015837569.1:c.[2047C>A]; XP_008196283.1:c.[2005C>A]; XP_015837574.1:c.[2017C>A]; XP_015837568.1:c.[2047C>A]","XP_015837576.1:p.[Gln652Lys]; XP_008196277.1:p.[Gln708Lys]; XP_015837566.1:p.[Gln712Lys]; XP_015837571.1:p.[Gln679Lys]; XP_015837573.1:p.[Gln673Lys]; XP_015837575.1:p.[Gln673Lys]; XP_015837572.1:p.[Gln673Lys]; XP_015837570.1:p.[Gln683Lys]; XP_015837569.1:p.[Gln683Lys]; XP_008196283.1:p.[Gln669Lys]; XP_015837574.1:p.[Gln673Lys]; XP_015837568.1:p.[Gln683Lys]","LOC657274",657274,null,"657274 [Gene Symbol: LOC657274] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A] [Gene Type: protein-coding]","retained; retn; LOC657274"]
[976,"NC_007422.5",16294727,"SNV","A","G","Heterozygous",6,30,20,0.91,0,6,0,39.17,6,39,3,2,0.96,0.21,0.37,"no","A/G","No",1,10.66,"XP_015837697.1:c.28A>G","XP_015837697.1:p.Ile10Val","LOC107398359",107398359,null,"107398359 [Gene Symbol: LOC107398359] [Locus Tag: TcasGA2_TC033891] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398359] [Gene Type: protein-coding]","TcasGA2_TC033891; LOC107398359"]
[977,"NC_007422.5",16294735,"Deletion","T","-","Heterozygous",15,24,62.5,1,10,13,0.43,36.27,23,32,8,11,-1.88,0.82,0.84,"no","-/T","Yes",3,63.33,"XP_015837697.1:c.36delT","XP_015837697.1:p.Phe13fs","LOC107398359",107398359,null,"107398359 [Gene Symbol: LOC107398359] [Locus Tag: TcasGA2_TC033891] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398359] [Gene Type: protein-coding]","TcasGA2_TC033891; LOC107398359"]
[978,"NC_007422.5",16294749,"SNV","A","G","Heterozygous",9,23,39.13,1,0,9,0,40.11,9,28,5,4,1.42,0.35,0.4,"no","A/G","No",1,65.27,"XP_015837697.1:c.50A>G","XP_015837697.1:p.Glu17Gly","LOC107398359",107398359,null,"107398359 [Gene Symbol: LOC107398359] [Locus Tag: TcasGA2_TC033891] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398359] [Gene Type: protein-coding]","TcasGA2_TC033891; LOC107398359"]
[979,"NC_007422.5",16294760,"SNV","G","A","Heterozygous",7,20,35,1,0,7,0,40.57,7,24,3,2,3.25,0.48,0.51,"no","A/G","No",1,46.53,"XP_015837697.1:c.61G>A","XP_015837697.1:p.Val21Met","LOC107398359",107398359,null,"107398359 [Gene Symbol: LOC107398359] [Locus Tag: TcasGA2_TC033891] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398359] [Gene Type: protein-coding]","TcasGA2_TC033891; LOC107398359"]
[980,"NC_007422.5",16365032,"SNV","T","A","Heterozygous",11,20,55,1,10,4,0.29,39,14,26,5,6,1.67,0.48,1,"no","A/T","No",1,72.11,"XP_015837699.1:c.528T>A","XP_015837699.1:p.His176Gln","LOC107398360",107398360,null,"107398360 [Gene Symbol: LOC107398360] [Locus Tag: TcasGA2_TC033894] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398360] [Gene Type: protein-coding]","TcasGA2_TC033894; LOC107398360"]
[981,"NC_007422.5",16448174,"SNV","A","C","Heterozygous",6,20,30,1,5,3,0.38,37.83,8,22,2,4,1.4,0.51,0.98,"no","A/C","No",1,37.09,"XP_015837727.1:c.296A>C","XP_015837727.1:p.Lys99Thr","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[982,"NC_007422.5","16448187..16448188","MNV","GG","CA","Heterozygous",8,22,36.36,1,3,7,0.3,36.94,10,24,3,5,1.37,0.43,0.98,"no","complex","No",1,200,"XP_015837727.1:c.309_310delGGinsCA","XP_015837727.1:p.Lys103_Asp104delinsAsnAsn","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[983,"NC_007422.5",16448267,"SNV","A","T","Homozygous",18,22,81.82,0.65,10,13,0.43,39.5,23,28,8,10,1.23,0.97,1,"no","A/T","No",1,4.53,"XP_015837727.1:c.389A>T","XP_015837727.1:p.His130Leu","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[984,"NC_007423.3",168763,"SNV","G","C","Homozygous",24,24,100,1,17,8,0.32,36.79,25,25,7,17,null,1,1,"no","C/C","No",1,92.92,"XP_966433.1:c.256C>G","XP_966433.1:p.Arg86Gly","LOC655245",655245,null,"655245 [Gene Symbol: LOC655245] [Locus Tag: TcasGA2_TC015978] [Chromosome: LG8] [Map Location: ] [Description: aldehyde dehydrogenase, dimeric NADP-preferring] [Gene Type: protein-coding]","LOC655245; TcasGA2_TC015978"]
[985,"NC_007423.3",437123,"SNV","C","T","Heterozygous",9,26,34.62,1,9,2,0.18,38.78,11,31,6,8,1.08,0.88,1,"no","C/T","No",1,45.32,"XP_015837818.1:c.[118C>T]; XP_015837819.1:c.[91C>T]","XP_015837818.1:p.[Arg40Trp]; XP_015837819.1:p.[Arg31Trp]","LOC103314574",103314574,null,"103314574 [Gene Symbol: LOC103314574] [Locus Tag: TcasGA2_TC033916] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314574] [Gene Type: protein-coding]","LOC103314574; TcasGA2_TC033916"]
[986,"NC_007423.3",437130,"SNV","G","C","Heterozygous",9,22,40.91,1,9,5,0.36,34.44,14,30,8,7,-1.77,0.82,0.93,"no","C/G","No",1,67.07,"XP_015837818.1:c.[125G>C]; XP_015837819.1:c.[98G>C]","XP_015837818.1:p.[Arg42Pro]; XP_015837819.1:p.[Arg33Pro]","LOC103314574",103314574,null,"103314574 [Gene Symbol: LOC103314574] [Locus Tag: TcasGA2_TC033916] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314574] [Gene Type: protein-coding]","LOC103314574; TcasGA2_TC033916"]
[987,"NC_007423.3",437134,"SNV","G","A","Heterozygous",5,21,23.81,0.99,5,1,0.17,38.8,6,29,5,5,1.49,0.27,0.92,"no","A/G","No",1,18.32,"XP_015837818.1:c.[129G>A]; XP_015837819.1:c.[102G>A]","XP_015837818.1:p.[Trp43*]; XP_015837819.1:p.[Trp34*]","LOC103314574",103314574,null,"103314574 [Gene Symbol: LOC103314574] [Locus Tag: TcasGA2_TC033916] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314574] [Gene Type: protein-coding]","LOC103314574; TcasGA2_TC033916"]
[988,"NC_007423.3",437173,"SNV","T","A","Heterozygous",6,21,28.57,1,4,6,0.4,36.83,10,32,3,5,-0.62,0.35,1,"no","A/T","No",1,30.97,"XP_015837819.1:c.[141T>A]; XP_015837818.1:c.[168T>A]","XP_015837819.1:p.[Asn47Lys]; XP_015837818.1:p.[Asn56Lys]","LOC103314574",103314574,null,"103314574 [Gene Symbol: LOC103314574] [Locus Tag: TcasGA2_TC033916] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314574] [Gene Type: protein-coding]","LOC103314574; TcasGA2_TC033916"]
[989,"NC_007423.3",437228,"SNV","T","G","Heterozygous",5,20,25,1,0,5,0,38.4,5,20,2,2,-0.04,0.62,1,"no","G/T","No",1,23.97,"XP_015837819.1:c.[196T>G]; XP_015837818.1:c.[223T>G]","XP_015837819.1:p.[Tyr66Asp]; XP_015837818.1:p.[Tyr75Asp]","LOC103314574",103314574,null,"103314574 [Gene Symbol: LOC103314574] [Locus Tag: TcasGA2_TC033916] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314574] [Gene Type: protein-coding]","LOC103314574; TcasGA2_TC033916"]
[990,"NC_007423.3",657928,"SNV","G","A","Homozygous",20,20,100,1,13,13,0.5,38.9,26,26,11,11,null,1,1,"no","A/A","No",1,82.49,"XP_008199200.1:c.[554C>T]; XP_008199201.1:c.[344C>T]; XP_015837930.1:c.[554C>T]","XP_008199200.1:p.[Ser185Phe]; XP_008199201.1:p.[Ser115Phe]; XP_015837930.1:p.[Ser185Phe]","LOC103314575",103314575,null,"103314575 [Gene Symbol: LOC103314575] [Locus Tag: TcasGA2_TC033920] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314575] [Gene Type: protein-coding]","TcasGA2_TC033920; LOC103314575"]
[991,"NC_007423.3",801436,"SNV","G","A","Heterozygous",9,27,33.33,1,8,8,0.5,39,16,36,6,8,1.65,0.4,0.91,"no","A/G","No",1,52.48,"XP_008199215.1:c.377G>A","XP_008199215.1:p.Gly126Glu","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[992,"NC_007423.3",801511,"SNV","A","G","Homozygous",24,27,88.89,1,14,23,0.38,38.29,37,42,7,9,null,1,1,"no","G/G","No",1,24,"XP_008199215.1:c.452A>G","XP_008199215.1:p.Asn151Ser","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[993,"NC_007423.3","802172^802173","Insertion","-","ATTGCC","Homozygous",37,37,100,1,29,18,0.38,38.26,47,47,18,27,null,1,1,"no","ATTGCC/ATTGCC","No",1,200,"XP_008199215.1:c.984_985insATTGCC","XP_008199215.1:p.Tyr328_Met329insIleAla","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[994,"NC_007423.3",802257,"SNV","G","A","Heterozygous",13,34,38.24,1,6,13,0.32,39.46,19,49,9,6,2.55,0.39,0.72,"no","A/G","No",1,83.9,"XP_008199215.1:c.1069G>A","XP_008199215.1:p.Glu357Lys","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[995,"NC_007423.3",802276,"SNV","T","A","Heterozygous",25,37,67.57,1,18,16,0.47,38.12,34,49,16,14,-3.15,0.97,0.96,"no","A/T","No",1,63.06,"XP_008199215.1:c.1088T>A","XP_008199215.1:p.Phe363Tyr","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[996,"NC_007423.3",802323,"SNV","A","G","Heterozygous",18,27,66.67,1,9,13,0.41,38.56,22,31,14,11,0.49,1,0.95,"no","A/G","No",1,52.52,"XP_008199215.1:c.1135A>G","XP_008199215.1:p.Ile379Val","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[997,"NC_007423.3",802335,"SNV","G","A","Heterozygous",8,25,32,1,1,7,0.12,39.38,8,28,3,5,2.13,0.61,0.58,"no","A/G","No",1,45.28,"XP_008199215.1:c.1147G>A","XP_008199215.1:p.Glu383Lys","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[998,"NC_007423.3",802593,"SNV","T","C","Homozygous",21,22,95.45,1,5,16,0.24,37.9,21,22,11,14,null,0.99,1,"no","C/C","No",1,54.82,"XP_008199215.1:c.1405T>C","XP_008199215.1:p.Tyr469His","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[999,"NC_007423.3",1816973,"SNV","C","A","Heterozygous",6,22,27.27,1,5,5,0.5,37.67,10,27,2,5,0,0.25,0.79,"no","A/C","No",1,23.53,"XP_967701.1:c.681G>T","XP_967701.1:p.Met227Ile","LOC656053",656053,null,"656053 [Gene Symbol: LOC656053] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: FAS-associated factor 2] [Gene Type: protein-coding]","LOC656053"]
[1000,"NC_007423.3",2369496,"SNV","G","A","Heterozygous",9,21,42.86,1,6,5,0.45,37.44,11,23,5,6,-0.04,0.96,0.99,"no","A/G","No",1,69.23,"XP_008196097.1:c.88G>A","XP_008196097.1:p.Gly30Ser","LOC655617",655617,null,"655617 [Gene Symbol: LOC655617] [Locus Tag: TcasGA2_TC006094] [Chromosome: LG8] [Map Location: ] [Description: peregrin] [Gene Type: protein-coding]","TcasGA2_TC006094; LOC655617"]
[1001,"NC_007423.3",2385571,"SNV","A","C","Heterozygous",18,24,75,0.98,9,13,0.41,37.06,22,28,9,11,-1.17,0.95,1,"no","A/C","No",1,18.02,"XP_967526.1:c.[337A>C]; XP_015837911.1:c.[337A>C]","XP_967526.1:p.[Lys113Gln]; XP_015837911.1:p.[Lys113Gln]","LOC655871",655871,null,"655871 [Gene Symbol: LOC655871] [Locus Tag: TcasGA2_TC006095] [Chromosome: LG8] [Map Location: ] [Description: sodium channel protein Nach] [Gene Type: protein-coding]","LOC655871; TcasGA2_TC006095"]
[1002,"NC_007423.3",2425691,"SNV","G","C","Heterozygous",22,32,68.75,1,15,9,0.38,37.82,24,35,5,19,2.5,0.8,1,"no","C/G","No",1,51.76,"XP_008196103.1:c.[4000C>G]; XP_008196102.1:c.[4000C>G]; XP_015837773.1:c.[4093C>G]","XP_008196103.1:p.[His1334Asp]; XP_008196102.1:p.[His1334Asp]; XP_015837773.1:p.[His1365Asp]","LOC656615",656615,null,"656615 [Gene Symbol: LOC656615] [Locus Tag: TcasGA2_TC006051] [Chromosome: LG8] [Map Location: ] [Description: GTPase-activating protein CdGAPr] [Gene Type: protein-coding]","TcasGA2_TC006051; LOC656615"]
[1003,"NC_007423.3","2426344^2426345","Insertion","-","CTCCTC","Heterozygous",10,26,38.46,1,8,2,0.2,36.93,10,27,4,5,-2.3,0.44,0.73,"no","complex","No",1,200,"XP_008196102.1:c.[3393_3394insGAGGAG]; XP_008196103.1:c.[3393_3394insGAGGAG]; XP_015837773.1:c.[3486_3487insGAGGAG]","XP_008196102.1:p.[Glu1131_Asn1132insGluGlu]; XP_008196103.1:p.[Glu1131_Asn1132insGluGlu]; XP_015837773.1:p.[Glu1162_Asn1163insGluGlu]","LOC656615",656615,null,"656615 [Gene Symbol: LOC656615] [Locus Tag: TcasGA2_TC006051] [Chromosome: LG8] [Map Location: ] [Description: GTPase-activating protein CdGAPr] [Gene Type: protein-coding]","TcasGA2_TC006051; LOC656615"]
[1004,"NC_007423.3","2440610..2440611","MNV","GG","TC","Homozygous",22,24,91.67,1,13,9,0.41,36.82,22,25,8,16,null,1,1,"no","TC/TC","No",1,200,"XP_015837773.1:c.[1196+2983_1196+2984delCCinsGA]; XP_008196102.1:c.[1103+2983_1103+2984delCCinsGA]; XP_008196103.1:c.[1103+2983_1103+2984delCCinsGA]; NP_001161929.1:c.[3569_3570delGGinsTC]","NP_001161929.1:p.Trp1190Phe","LOC656615, Pmp14","656615 , 100313959","peritrophic matrix protein 14","656615 [Gene Symbol: LOC656615] [Locus Tag: TcasGA2_TC006051] [Chromosome: LG8] [Map Location: ] [Description: GTPase-activating protein CdGAPr] [Gene Type: protein-coding] || 100313959 [Gene Symbol: Pmp14] [Locus Tag: TcasGA2_TC033952] [Chromosome: LG8] [Map Location: ] [Description: peritrophic matrix protein 14] [Gene Type: protein-coding]","TcasGA2_TC006051; LOC656615 || Pmp14; TcasGA2_TC033952"]
[1005,"NC_007423.3",2464762,"SNV","C","A","Heterozygous",6,26,23.08,0.95,6,3,0.33,33.17,9,31,3,5,-2.92,0.26,0.92,"no","A/C","No",1,12.66,"XP_968688.1:c.1196C>A","XP_968688.1:p.Ala399Glu","LOC657116",657116,null,"657116 [Gene Symbol: LOC657116] [Locus Tag: TcasGA2_TC006102] [Chromosome: LG8] [Map Location: ] [Description: vacuolar protein sorting-associated protein 33A] [Gene Type: protein-coding]","LOC657116; TcasGA2_TC006102"]
[1006,"NC_007423.3",2486797,"SNV","T","C","Heterozygous",19,25,76,0.99,15,6,0.29,37.37,21,33,9,17,0,0.97,0.96,"no","C/T","No",1,22.67,"XP_015837793.1:c.5608A>G","XP_015837793.1:p.Thr1870Ala","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1007,"NC_007423.3",2486845,"SNV","G","A","Homozygous",23,23,100,1,14,15,0.48,37.09,29,29,11,18,null,1,1,"no","A/A","No",1,91.52,"XP_015837793.1:c.5560C>T","XP_015837793.1:p.Gln1854*","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1008,"NC_007423.3",2487802,"SNV","C","T","Heterozygous",11,20,55,1,8,6,0.43,38.18,14,27,5,8,0.95,0.82,1,"no","C/T","No",1,73.62,"XP_015837793.1:c.4753G>A","XP_015837793.1:p.Glu1585Lys","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1009,"NC_007423.3",2488558,"SNV","C","T","Heterozygous",15,23,65.22,1,12,10,0.45,35.93,22,30,6,10,-2.81,0.8,1,"no","C/T","No",1,52.57,"XP_015837793.1:c.3997G>A","XP_015837793.1:p.Asp1333Asn","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1010,"NC_007423.3",2488591,"SNV","A","G","Heterozygous",16,20,80,0.87,7,14,0.33,38.31,21,28,6,10,1.7,0.51,1,"no","A/G","No",1,8.94,"XP_015837793.1:c.3964T>C","XP_015837793.1:p.Tyr1322His","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1011,"NC_007423.3",2492268,"SNV","G","T","Heterozygous",12,25,48,1,6,6,0.5,39.67,12,28,4,5,1.01,0.9,1,"no","G/T","No",1,91.56,"XP_015837793.1:c.2672C>A","XP_015837793.1:p.Pro891Gln","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1012,"NC_007423.3",2492326,"SNV","T","C","Homozygous",25,25,100,1,25,4,0.14,36.68,29,29,9,14,null,1,1,"no","C/C","No",1,95.93,"XP_015837793.1:c.2614A>G","XP_015837793.1:p.Lys872Glu","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1013,"NC_007423.3","2492336..2492341","Deletion","TGTTGC","-","Homozygous",18,20,90,1,17,3,0.15,33.06,20,22,6,12,null,0.99,1,"no","-/-","No",1,200,"XP_015837793.1:c.2599_2604delGCAACA","XP_015837793.1:p.Ala867_Thr868del","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1014,"NC_007423.3",2492488,"SNV","T","C","Heterozygous",7,31,22.58,0.98,3,7,0.3,39.86,10,39,2,2,1.94,0.08,0.96,"no","C/T","No",1,17.6,"XP_015837793.1:c.2452A>G","XP_015837793.1:p.Thr818Ala","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1015,"NC_007423.3",2544349,"SNV","A","G","Homozygous",24,24,100,1,18,16,0.47,35.33,34,34,9,15,null,1,1,"no","G/G","No",1,92.92,"XP_008196116.1:c.197T>C","XP_008196116.1:p.Ile66Thr","LOC658295",658295,null,"658295 [Gene Symbol: LOC658295] [Locus Tag: TcasGA2_TC006042] [Chromosome: LG8] [Map Location: ] [Description: histone-lysine N-methyltransferase eggless] [Gene Type: protein-coding]","LOC658295; TcasGA2_TC006042"]
[1016,"NC_007423.3",2544403,"SNV","C","G","Homozygous",21,21,100,1,11,12,0.48,37.67,23,23,8,15,null,1,1,"no","G/G","No",1,83.89,"XP_008196116.1:c.143G>C","XP_008196116.1:p.Gly48Ala","LOC658295",658295,null,"658295 [Gene Symbol: LOC658295] [Locus Tag: TcasGA2_TC006042] [Chromosome: LG8] [Map Location: ] [Description: histone-lysine N-methyltransferase eggless] [Gene Type: protein-coding]","LOC658295; TcasGA2_TC006042"]
[1017,"NC_007423.3",2569659,"SNV","T","G","Heterozygous",17,25,68,1,12,5,0.29,37.29,17,25,4,12,-0.12,0.33,0.9,"no","G/T","No",1,40.53,"XP_008196119.1:c.1565A>C","XP_008196119.1:p.Asn522Thr","LOC658811",658811,null,"658811 [Gene Symbol: LOC658811] [Locus Tag: TcasGA2_TC006038] [Chromosome: LG8] [Map Location: ] [Description: probable ATP-dependent RNA helicase DDX55 homolog] [Gene Type: protein-coding]","LOC658811; TcasGA2_TC006038"]
[1018,"NC_007423.3",2614240,"SNV","A","G","Homozygous",21,21,100,1,5,16,0.24,38.14,21,21,8,11,null,1,1,"no","G/G","No",1,83.88,"XP_008196134.1:c.[337A>G]; XP_970743.2:c.[337A>G]","XP_008196134.1:p.[Ser113Gly]; XP_970743.2:p.[Ser113Gly]","LOC659333",659333,null,"659333 [Gene Symbol: LOC659333] [Locus Tag: TcasGA2_TC033954] [Chromosome: LG8] [Map Location: ] [Description: TRAF-type zinc finger domain-containing protein 1-like] [Gene Type: protein-coding]","LOC659333; TcasGA2_TC033954"]
[1019,"NC_007423.3","2703260..2703261","MNV","TC","AT","Heterozygous",8,21,38.1,1,1,8,0.11,38.5,9,22,3,6,2.47,0.21,0.61,"no","complex","No",1,200,"XP_015837934.1:c.[455_456delTCinsAT]; XP_001812549.1:c.[455_456delTCinsAT]","XP_015837934.1:p.[Val152Asp]; XP_001812549.1:p.[Val152Asp]","LOC100141869",100141869,null,"100141869 [Gene Symbol: LOC100141869] [Locus Tag: TcasGA2_TC006120] [Chromosome: LG8] [Map Location: ] [Description: putative fatty acyl-CoA reductase CG5065] [Gene Type: protein-coding]","TcasGA2_TC006120; LOC100141869"]
[1020,"NC_007423.3",2832959,"SNV","C","A","Heterozygous",27,42,64.29,1,22,13,0.37,36.33,35,52,11,15,-2.74,0.29,0.99,"no","A/C","No",1,90.8,"XP_971924.1:c.92G>T","XP_971924.1:p.Arg31Leu","LOC660615",660615,null,"660615 [Gene Symbol: LOC660615] [Locus Tag: TcasGA2_TC006028] [Chromosome: LG8] [Map Location: ] [Description: alpha-ketoglutarate-dependent dioxygenase alkB homolog 4] [Gene Type: protein-coding]","LOC660615; TcasGA2_TC006028"]
[1021,"NC_007423.3",2889072,"SNV","G","T","Heterozygous",5,22,22.73,0.96,5,0,0,40.4,5,24,1,4,3.13,0.07,0.22,"no","G/T","No",1,13.59,"XP_008196161.1:c.2095C>A","XP_008196161.1:p.Arg699Ser","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1022,"NC_007423.3","2889206^2889207","Insertion","-","GGC","Homozygous",26,26,100,1,15,11,0.42,34.82,26,26,6,13,null,1,1,"no","GGC/GGC","No",1,200,"XP_008196161.1:c.1960_1961insGCC","XP_008196161.1:p.Arg653_Gln654insArg","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1023,"NC_007423.3",2889285,"SNV","T","C","Homozygous",21,21,100,1,0,21,0,37.33,21,21,4,9,null,1,1,"no","C/C","No",1,83.89,"XP_008196161.1:c.1882A>G","XP_008196161.1:p.Ser628Gly","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1024,"NC_007423.3",2889453,"SNV","G","T","Heterozygous",21,29,72.41,1,9,12,0.43,35.9,21,29,4,10,2.44,0.78,0.87,"no","G/T","No",1,37.23,"XP_008196161.1:c.1714C>A","XP_008196161.1:p.Gln572Lys","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1025,"NC_007423.3",2889456,"SNV","C","T","Heterozygous",21,29,72.41,1,9,12,0.43,35,21,29,4,10,0.54,0.57,0.87,"no","C/T","No",1,35.83,"XP_008196161.1:c.1711G>A","XP_008196161.1:p.Gly571Ser","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1026,"NC_007423.3",2918605,"SNV","T","A","Homozygous",29,29,100,1,16,22,0.42,35.66,38,38,9,14,null,1,1,"no","A/A","No",1,109.57,"XP_001813387.1:c.1427A>T","XP_001813387.1:p.Lys476Met","LOC100141949",100141949,null,"100141949 [Gene Symbol: LOC100141949] [Locus Tag: TcasGA2_TC006020] [Chromosome: LG8] [Map Location: ] [Description: Meckel syndrome type 1 protein] [Gene Type: protein-coding]","LOC100141949; TcasGA2_TC006020"]
[1027,"NC_007423.3",3680568,"SNV","G","A","Heterozygous",11,32,34.38,1,7,10,0.41,37.27,17,40,7,6,-2.42,0.38,0.99,"no","A/G","No",1,64.05,"XP_015837947.1:c.[629G>A]; XP_015837946.1:c.[629G>A]; XP_015837948.1:c.[629G>A]","XP_015837947.1:p.[Gly210Glu]; XP_015837946.1:p.[Gly210Glu]; XP_015837948.1:p.[Gly210Glu]","LOC107398426",107398426,null,"107398426 [Gene Symbol: LOC107398426] [Locus Tag: TcasGA2_TC006145] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398426] [Gene Type: protein-coding]","LOC107398426; TcasGA2_TC006145"]
[1028,"NC_007423.3",3873190,"SNV","C","A","Heterozygous",7,25,28,1,0,7,0,39.57,7,25,2,4,3.06,0.12,0.08,"no","A/C","No",1,27.92,"XP_008196183.1:c.[718C>A]; XP_015837927.1:c.[718C>A]; XP_973205.1:c.[919C>A]","XP_008196183.1:p.[Leu240Met]; XP_015837927.1:p.[Leu240Met]; XP_973205.1:p.[Leu307Met]","LOC661984",661984,null,"661984 [Gene Symbol: LOC661984] [Locus Tag: TcasGA2_TC006150] [Chromosome: LG8] [Map Location: ] [Description: probable ribonuclease ZC3H12B] [Gene Type: protein-coding]","LOC661984; TcasGA2_TC006150"]
[1029,"NC_007423.3",3890367,"SNV","G","C","Heterozygous",15,24,62.5,1,10,13,0.43,40.13,23,32,10,12,0.36,0.65,0.94,"no","C/G","No",1,61.3,"XP_015837876.1:c.232G>C","XP_015837876.1:p.Gly78Arg","LOC662131, LOC103313760","662131 , 103313760",null,"662131 [Gene Symbol: LOC662131] [Locus Tag: TcasGA2_TC006154] [Chromosome: LG8] [Map Location: ] [Description: toll-like receptor 2] [Gene Type: protein-coding] || 103313760 [Gene Symbol: LOC103313760] [Locus Tag: TcasGA2_TC006153] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313760] [Gene Type: protein-coding]","TcasGA2_TC006154; LOC662131 || LOC103313760; TcasGA2_TC006153"]
[1030,"NC_007423.3",4152844,"SNV","A","G","Homozygous",20,20,100,1,5,19,0.21,34,24,24,7,8,null,1,1,"no","G/G","No",1,77.87,"XP_973673.1:c.[2285T>C]; XP_015837847.1:c.[2285T>C]","XP_973673.1:p.[Leu762Ser]; XP_015837847.1:p.[Leu762Ser]","LOC662488",662488,null,"662488 [Gene Symbol: LOC662488] [Locus Tag: TcasGA2_TC005989] [Chromosome: LG8] [Map Location: ] [Description: protein transport protein Sec31A] [Gene Type: protein-coding]","TcasGA2_TC005989; LOC662488"]
[1031,"NC_007423.3",4182059,"SNV","T","C","Heterozygous",12,24,50,1,0,12,0,39.17,12,26,4,6,0.49,0.14,0.2,"no","C/T","No",1,96.85,"XP_973827.2:c.140A>G","XP_973827.2:p.Lys47Arg","LOC662650",662650,null,"662650 [Gene Symbol: LOC662650] [Locus Tag: TcasGA2_TC005986] [Chromosome: LG8] [Map Location: ] [Description: isoaspartyl peptidase/L-asparaginase] [Gene Type: protein-coding]","LOC662650; TcasGA2_TC005986"]
[1032,"NC_007423.3",4220091,"SNV","T","C","Homozygous",20,20,100,1,9,14,0.39,35.9,23,23,10,14,null,1,1,"no","C/C","No",1,80.88,"XP_974107.1:c.562T>C","XP_974107.1:p.Ser188Pro","LOC662946",662946,null,"662946 [Gene Symbol: LOC662946] [Locus Tag: TcasGA2_TC006168] [Chromosome: LG8] [Map Location: ] [Description: transcription factor A, mitochondrial] [Gene Type: protein-coding]","LOC662946; TcasGA2_TC006168"]
[1033,"NC_007423.3",4634704,"SNV","T","A","Heterozygous",11,24,45.83,1,3,8,0.27,37.55,11,24,2,7,-0.2,0.61,0.67,"no","A/T","No",1,86.46,"XP_008201667.1:c.[2923A>T]; XP_008201669.1:c.[2890A>T]; XP_015837891.1:c.[2881A>T]; XP_015837892.1:c.[2770A>T]; XP_008201666.1:c.[2926A>T]; XP_008201670.1:c.[2845A>T]","XP_008201667.1:p.[Ser975Cys]; XP_008201669.1:p.[Ser964Cys]; XP_015837891.1:p.[Ser961Cys]; XP_015837892.1:p.[Ser924Cys]; XP_008201666.1:p.[Ser976Cys]; XP_008201670.1:p.[Ser949Cys]","LOC655697",655697,null,"655697 [Gene Symbol: LOC655697] [Locus Tag: TcasGA2_TC005963] [Chromosome: LG8] [Map Location: ] [Description: autism susceptibility gene 2 protein] [Gene Type: protein-coding]","TcasGA2_TC005963; LOC655697"]
[1034,"NC_007423.3",4727283,"SNV","C","A","Heterozygous",5,21,23.81,0.96,5,0,0,39.8,5,23,2,3,2.97,{"v":0.00899,"d":"8.99E-03"},0.52,"no","A/C","No",1,13.75,"XP_008201673.1:c.[1721C>A]; XP_008201672.1:c.[1733C>A]","XP_008201673.1:p.[Ala574Glu]; XP_008201672.1:p.[Ala578Glu]","LOC655872",655872,null,"655872 [Gene Symbol: LOC655872] [Locus Tag: TcasGA2_TC006187] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC655872] [Gene Type: protein-coding]","TcasGA2_TC006187; LOC655872"]
[1035,"NC_007423.3",4842035,"SNV","C","A","Homozygous",25,25,100,1,15,10,0.4,37.6,25,25,10,15,null,1,1,"no","A/A","No",1,97.53,"XP_008196464.1:c.305C>A","XP_008196464.1:p.Thr102Lys","LOC103313865",103313865,null,"103313865 [Gene Symbol: LOC103313865] [Locus Tag: TcasGA2_TC006197] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006197; LOC103313865"]
[1036,"NC_007423.3",5418669,"SNV","A","G","Homozygous",20,20,100,1,9,11,0.45,39.8,20,20,7,12,null,1,1,"no","G/G","No",1,80.88,"XP_001812465.1:c.286T>C","XP_001812465.1:p.Ser96Pro","LOC100142121",100142121,null,"100142121 [Gene Symbol: LOC100142121] [Locus Tag: TcasGA2_TC005930] [Chromosome: LG8] [Map Location: ] [Description: ribosomal L1 domain-containing protein 1] [Gene Type: protein-coding]","LOC100142121; TcasGA2_TC005930"]
[1037,"NC_007423.3",5539806,"SNV","T","C","Heterozygous",12,24,50,1,9,3,0.25,37.83,12,27,3,8,-0.78,0.25,0.68,"no","C/T","No",1,96.87,"XP_972682.1:c.[464A>G]; XP_008196503.1:c.[461A>G]","XP_972682.1:p.[Lys155Arg]; XP_008196503.1:p.[Lys154Arg]","LOC661432",661432,null,"661432 [Gene Symbol: LOC661432] [Locus Tag: TcasGA2_TC005921] [Chromosome: LG8] [Map Location: ] [Description: enkurin domain-containing protein 1] [Gene Type: protein-coding]","LOC661432; TcasGA2_TC005921"]
[1038,"NC_007423.3",5666232,"SNV","G","C","Heterozygous",9,24,37.5,1,6,3,0.33,38.11,9,25,5,6,0.3,0.25,0.29,"no","C/G","No",1,61.58,"XP_015837868.1:c.[368C>G]; XP_015837865.1:c.[197-54706G>C]; XP_015837867.1:c.[368C>G]; XP_015837866.1:c.[197-54706G>C]","XP_015837868.1:p.[Thr123Ser]; XP_015837867.1:p.[Thr123Ser]","LOC103313893, LOC107398410","103313893 , 107398410",null,"103313893 [Gene Symbol: LOC103313893] [Locus Tag: TcasGA2_TC006244] [Chromosome: LG8] [Map Location: ] [Description: TWiK family of potassium channels protein 7] [Gene Type: protein-coding] || 107398410 [Gene Symbol: LOC107398410] [Locus Tag: TcasGA2_TC005912] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398410] [Gene Type: protein-coding]","LOC103313893; TcasGA2_TC006244 || TcasGA2_TC005912; LOC107398410"]
[1039,"NC_007423.3",5773760,"SNV","A","G","Homozygous",18,21,85.71,0.84,7,16,0.3,38.56,23,26,10,9,null,0.88,1,"no","G/G","No",1,8.08,"XP_008196535.1:c.170A>G","XP_008196535.1:p.His57Arg","LOC103313880",103313880,null,"103313880 [Gene Symbol: LOC103313880] [Locus Tag: TcasGA2_TC006247] [Chromosome: LG8] [Map Location: ] [Description: collagenase] [Gene Type: protein-coding]","LOC103313880; TcasGA2_TC006247"]
[1040,"NC_007423.3",5777400,"SNV","T","C","Homozygous",21,21,100,1,13,12,0.48,37.14,25,25,9,16,null,1,1,"no","C/C","No",1,83.89,"XP_008196580.1:c.253A>G","XP_008196580.1:p.Asn85Asp","LOC662132",662132,null,"662132 [Gene Symbol: LOC662132] [Locus Tag: TcasGA2_TC005906] [Chromosome: LG8] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC662132; TcasGA2_TC005906"]
[1041,"NC_007423.3",5817707,"SNV","T","C","Heterozygous",13,22,59.09,1,10,3,0.23,36.23,13,22,5,9,-0.97,0.66,1,"no","C/T","No",1,66.46,"XP_973543.1:c.[112A>G]; XP_008196537.1:c.[112A>G]","XP_973543.1:p.[Ser38Gly]; XP_008196537.1:p.[Ser38Gly]","LOC662349",662349,null,"662349 [Gene Symbol: LOC662349] [Locus Tag: TcasGA2_TC005902] [Chromosome: LG8] [Map Location: ] [Description: polypeptide N-acetylgalactosaminyltransferase 5] [Gene Type: protein-coding]","LOC662349; TcasGA2_TC005902"]
[1042,"NC_007423.3",5954503,"SNV","C","A","Heterozygous",5,20,25,0.98,5,2,0.29,37.6,7,24,3,4,-0.17,0.2,0.62,"no","A/C","No",1,16.46,"XP_008196599.1:c.[1784G>T]; XP_008196603.1:c.[1721G>T]; XP_008196597.1:c.[1859G>T]; XP_008196601.1:c.[1751G>T]; XP_008196605.1:c.[1673G>T]; XP_008196598.1:c.[1799G>T]; XP_008196596.1:c.[1862G>T]; XP_008196606.1:c.[1610G>T]; XP_015837972.1:c.[1862G>T]; XP_008196600.1:c.[1781G>T]; XP_015837973.1:c.[1532G>T]; XP_008196604.1:c.[1718G>T]","XP_008196599.1:p.[Arg595Leu]; XP_008196603.1:p.[Arg574Leu]; XP_008196597.1:p.[Arg620Leu]; XP_008196601.1:p.[Arg584Leu]; XP_008196605.1:p.[Arg558Leu]; XP_008196598.1:p.[Arg600Leu]; XP_008196596.1:p.[Arg621Leu]; XP_008196606.1:p.[Arg537Leu]; XP_015837972.1:p.[Arg621Leu]; XP_008196600.1:p.[Arg594Leu]; XP_015837973.1:p.[Arg511Leu]; XP_008196604.1:p.[Arg573Leu]","LOC103313904",103313904,null,"103313904 [Gene Symbol: LOC103313904] [Locus Tag: TcasGA2_TC034013] [Chromosome: LG8] [Map Location: ] [Description: insulin receptor substrate 1] [Gene Type: protein-coding]","TcasGA2_TC034013; LOC103313904"]
[1043,"NC_007423.3",5987419,"SNV","T","C","Heterozygous",6,25,24,1,0,6,0,35,6,27,1,3,-2.67,0.05,0.32,"no","complex","No",1,156.54,"XP_008196607.1:c.[470A>G]; XP_008196608.1:c.[470A>G]; XP_015837981.1:c.[563A>G]","XP_008196607.1:p.[Glu157Gly]; XP_008196608.1:p.[Glu157Gly]; XP_015837981.1:p.[Glu188Gly]","LOC655787",655787,null,"655787 [Gene Symbol: LOC655787] [Locus Tag: TcasGA2_TC005889] [Chromosome: LG8] [Map Location: ] [Description: nitrogen permease regulator 2-like protein] [Gene Type: protein-coding]","LOC655787; TcasGA2_TC005889"]
[1044,"NC_007423.3",5992866,"SNV","T","G","Heterozygous",16,26,61.54,1,6,10,0.38,37.94,16,28,5,8,1.11,0.73,0.96,"no","G/T","No",1,63.34,"XP_008196612.1:c.235A>C","XP_008196612.1:p.Asn79His","LOC103313906",103313906,null,"103313906 [Gene Symbol: LOC103313906] [Locus Tag: TcasGA2_TC005888] [Chromosome: LG8] [Map Location: ] [Description: zinc finger protein 513] [Gene Type: protein-coding]","LOC103313906; TcasGA2_TC005888"]
[1045,"NC_007423.3","6036175..6036176","MNV","TA","CG","Heterozygous",9,22,40.91,1,0,9,0,39.67,9,23,3,5,1.38,0.03,0.03,"no","complex","No",1,200,"XP_008196614.1:c.441_442delTAinsCG","XP_008196614.1:p.Ile148Val","LOC100142503",100142503,null,"100142503 [Gene Symbol: LOC100142503] [Locus Tag: TcasGA2_TC005883] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase subunit gamma-2, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC005883; LOC100142503"]
[1046,"NC_007423.3",6048353,"SNV","C","T","Heterozygous",16,21,76.19,0.99,14,6,0.3,36.94,20,25,11,8,-1.11,0.98,0.98,"no","C/T","No",1,19.89,"XP_015837996.1:c.[2563G>A]; XP_015837997.1:c.[2494G>A]","XP_015837996.1:p.[Val855Met]; XP_015837997.1:p.[Val832Met]","LOC657204",657204,null,"657204 [Gene Symbol: LOC657204] [Locus Tag: TcasGA2_TC005880] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657204] [Gene Type: protein-coding]","TcasGA2_TC005880; LOC657204"]
[1047,"NC_007423.3",6048776,"SNV","G","A","Heterozygous",6,22,27.27,1,5,4,0.44,35.83,9,27,3,5,-0.15,0.18,1,"no","A/G","No",1,28.23,"XP_015837996.1:c.[2140C>T]; XP_015837997.1:c.[2071C>T]","XP_015837996.1:p.[Arg714Cys]; XP_015837997.1:p.[Arg691Cys]","LOC657204",657204,null,"657204 [Gene Symbol: LOC657204] [Locus Tag: TcasGA2_TC005880] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657204] [Gene Type: protein-coding]","TcasGA2_TC005880; LOC657204"]
[1048,"NC_007423.3",6049921,"SNV","C","T","Heterozygous",17,30,56.67,1,11,6,0.35,35.65,17,30,5,9,-0.61,0.86,0.67,"no","C/T","No",1,96.91,"XP_015837997.1:c.[1501G>A]; XP_015837996.1:c.[1570G>A]","XP_015837997.1:p.[Val501Ile]; XP_015837996.1:p.[Val524Ile]","LOC657204",657204,null,"657204 [Gene Symbol: LOC657204] [Locus Tag: TcasGA2_TC005880] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657204] [Gene Type: protein-coding]","TcasGA2_TC005880; LOC657204"]
[1049,"NC_007423.3",6049927,"SNV","T","C","Heterozygous",17,29,58.62,1,11,10,0.48,35.82,21,33,7,8,1.08,0.45,0.64,"no","C/T","No",1,85.21,"XP_015837996.1:c.[1564A>G]; XP_015837997.1:c.[1495A>G]","XP_015837996.1:p.[Asn522Asp]; XP_015837997.1:p.[Asn499Asp]","LOC657204",657204,null,"657204 [Gene Symbol: LOC657204] [Locus Tag: TcasGA2_TC005880] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657204] [Gene Type: protein-coding]","TcasGA2_TC005880; LOC657204"]
[1050,"NC_007423.3",6049950,"SNV","G","A","Heterozygous",19,26,73.08,1,12,14,0.46,35.32,26,33,7,9,0.78,0.85,1,"no","A/G","No",1,31.34,"XP_015837996.1:c.[1541C>T]; XP_015837997.1:c.[1472C>T]","XP_015837996.1:p.[Ser514Leu]; XP_015837997.1:p.[Ser491Leu]","LOC657204",657204,null,"657204 [Gene Symbol: LOC657204] [Locus Tag: TcasGA2_TC005880] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657204] [Gene Type: protein-coding]","TcasGA2_TC005880; LOC657204"]
[1051,"NC_007423.3",6061078,"SNV","A","G","Homozygous",24,24,100,1,16,12,0.43,37.17,28,28,10,17,null,1,1,"no","G/G","No",1,92.91,"XP_008196618.1:c.[668A>G]; XP_015837998.1:c.[482A>G]; XP_008196619.1:c.[668A>G]","XP_008196618.1:p.[Asp223Gly]; XP_015837998.1:p.[Asp161Gly]; XP_008196619.1:p.[Asp223Gly]","LOC103313907",103313907,null,"103313907 [Gene Symbol: LOC103313907] [Locus Tag: TcasGA2_TC006273] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313907] [Gene Type: protein-coding]","TcasGA2_TC006273; LOC103313907"]
[1052,"NC_007423.3",6061365,"SNV","T","C","Homozygous",20,20,100,1,12,8,0.4,38,20,20,7,10,null,1,1,"no","C/C","No",1,80.88,"XP_008196619.1:c.[955T>C]; XP_008196618.1:c.[955T>C]; XP_015837998.1:c.[769T>C]","XP_008196619.1:p.[Phe319Leu]; XP_008196618.1:p.[Phe319Leu]; XP_015837998.1:p.[Phe257Leu]","LOC103313907",103313907,null,"103313907 [Gene Symbol: LOC103313907] [Locus Tag: TcasGA2_TC006273] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313907] [Gene Type: protein-coding]","TcasGA2_TC006273; LOC103313907"]
[1053,"NC_007423.3",6117583,"SNV","C","T","Homozygous",21,21,100,1,15,7,0.32,37.33,22,22,10,17,null,1,1,"no","T/T","No",1,85.53,"XP_969421.1:c.308G>A","XP_969421.1:p.Arg103Lys","LOC107398445, LOC657901","107398445 , 657901",null,"107398445 [Gene Symbol: LOC107398445] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398445] [Gene Type: ncRNA] || 657901 [Gene Symbol: LOC657901] [Locus Tag: TcasGA2_TC005874] [Chromosome: LG8] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC107398445 || TcasGA2_TC005874; LOC657901"]
[1054,"NC_007423.3",6190282,"SNV","C","T","Homozygous",20,20,100,1,8,15,0.35,35.1,23,23,11,9,null,1,1,"no","T/T","No",1,82.53,"XP_015837991.1:c.[1377+401G>A]; XP_008196637.1:c.[17C>T]; XP_015837990.1:c.[1377+401G>A]; XP_015837989.1:c.[1377+401G>A]; XP_015837992.1:c.[1377+401G>A]","XP_008196637.1:p.Thr6Ile","LOC658889, LOC103313911","658889 , 103313911",null,"658889 [Gene Symbol: LOC658889] [Locus Tag: TcasGA2_TC005866] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: probable ATP-dependent DNA helicase HFM1] [Gene Type: protein-coding] || 103313911 [Gene Symbol: LOC103313911] [Locus Tag: TcasGA2_TC034021] [Chromosome: LG8] [Map Location: ] [Description: pro-resilin-like] [Gene Type: protein-coding]","LOC658889; HFM1; TcasGA2_TC005866 || TcasGA2_TC034021; LOC103313911"]
[1055,"NC_007423.3",6200611,"SNV","T","G","Homozygous",27,27,100,1,21,6,0.22,37.07,27,27,8,18,null,1,1,"no","G/G","No",1,101.94,"XP_970535.2:c.[684T>G]; XP_008196638.1:c.[774T>G]","XP_970535.2:p.[Phe228Leu]; XP_008196638.1:p.[Phe258Leu]","LOC659110",659110,null,"659110 [Gene Symbol: LOC659110] [Locus Tag: TcasGA2_TC006284] [Chromosome: LG8] [Map Location: ] [Description: gamma-glutamyltranspeptidase 1] [Gene Type: protein-coding]","LOC659110; TcasGA2_TC006284"]
[1056,"NC_007423.3",6745893,"SNV","C","T","Heterozygous",7,24,29.17,1,7,6,0.46,35.29,13,35,3,7,-0.38,0.39,0.86,"no","complex","No",1,200,"XP_008196671.1:c.[904C>T]; XP_008196670.1:c.[904C>T]","XP_008196671.1:p.[Pro302Ser]; XP_008196670.1:p.[Pro302Ser]","LOC661340",661340,null,"661340 [Gene Symbol: LOC661340] [Locus Tag: TcasGA2_TC006299] [Chromosome: LG8] [Map Location: ] [Description: death-associated protein kinase 1] [Gene Type: protein-coding]","TcasGA2_TC006299; LOC661340"]
[1057,"NC_007423.3","6745894..6745895","MNV","CT","TC","Heterozygous",19,28,67.86,1,17,8,0.32,36.54,25,40,14,15,null,0.91,1,"no","complex","No",1,200,"XP_008196671.1:c.[905_906delCTinsTC]; XP_008196670.1:c.[905_906delCTinsTC]","XP_008196671.1:p.[Pro302Leu]; XP_008196670.1:p.[Pro302Leu]","LOC661340",661340,null,"661340 [Gene Symbol: LOC661340] [Locus Tag: TcasGA2_TC006299] [Chromosome: LG8] [Map Location: ] [Description: death-associated protein kinase 1] [Gene Type: protein-coding]","TcasGA2_TC006299; LOC661340"]
[1058,"NC_007423.3",6990900,"SNV","A","C","Heterozygous",14,22,63.64,1,10,10,0.5,35.64,20,31,7,6,0.96,0.31,1,"no","A/C","No",1,49.09,"XP_008196691.1:c.[2092A>C]; XP_015838021.1:c.[2086A>C]; XP_015838020.1:c.[2092A>C]; XP_015838019.1:c.[2092A>C]","XP_008196691.1:p.[Ser698Arg]; XP_015838021.1:p.[Ser696Arg]; XP_015838020.1:p.[Ser698Arg]; XP_015838019.1:p.[Ser698Arg]","LOC661809",661809,null,"661809 [Gene Symbol: LOC661809] [Locus Tag: TcasGA2_TC034037] [Chromosome: LG8] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","LOC661809; TcasGA2_TC034037"]
[1059,"NC_007423.3",6992810,"SNV","G","C","Homozygous",22,22,100,1,13,9,0.41,36.5,22,22,11,14,null,1,1,"no","C/C","No",1,86.9,"XP_008196691.1:c.[3911G>C]; XP_015838021.1:c.[3905G>C]; XP_015838020.1:c.[3911G>C]; XP_015838019.1:c.[3911G>C]","XP_008196691.1:p.[Gly1304Ala]; XP_015838021.1:p.[Gly1302Ala]; XP_015838020.1:p.[Gly1304Ala]; XP_015838019.1:p.[Gly1304Ala]","LOC661809",661809,null,"661809 [Gene Symbol: LOC661809] [Locus Tag: TcasGA2_TC034037] [Chromosome: LG8] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","LOC661809; TcasGA2_TC034037"]
[1060,"NC_007423.3",7000881,"SNV","C","T","Heterozygous",15,67,22.39,0.99,13,2,0.13,38.93,15,76,10,12,0.3,0.08,0.07,"no","C/T","No",1,20.31,"XP_008194621.1:c.[2294G>A]; XP_008194622.1:c.[2069G>A]","XP_008194621.1:p.[Ser765Asn]; XP_008194622.1:p.[Ser690Asn]","LOC103313361",103313361,null,"103313361 [Gene Symbol: LOC103313361] [Locus Tag: TcasGA2_TC015228] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313361] [Gene Type: protein-coding]","TcasGA2_TC015228; LOC103313361"]
[1061,"NC_007423.3",7000999,"SNV","T","C","Heterozygous",51,91,56.04,1,33,26,0.44,37.71,59,111,31,38,-0.74,0.77,1,"no","C/T","No",1,200,"XP_008194622.1:c.[1951A>G]; XP_008194621.1:c.[2176A>G]","XP_008194622.1:p.[Asn651Asp]; XP_008194621.1:p.[Asn726Asp]","LOC103313361",103313361,null,"103313361 [Gene Symbol: LOC103313361] [Locus Tag: TcasGA2_TC015228] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313361] [Gene Type: protein-coding]","TcasGA2_TC015228; LOC103313361"]
[1062,"NC_007423.3",7025540,"SNV","G","A","Heterozygous",13,20,65,1,9,4,0.31,40.31,13,22,5,6,0.87,0.93,0.99,"no","A/G","No",1,48.11,"XP_972482.1:c.584C>T","XP_972482.1:p.Ser195Phe","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1063,"NC_007423.3",7025585,"SNV","G","A","Heterozygous",12,21,57.14,1,6,6,0.5,35.25,12,21,7,3,-1.03,0.84,0.99,"no","A/G","No",1,70.8,"XP_972482.1:c.539C>T","XP_972482.1:p.Ala180Val","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1064,"NC_007423.3",7025642,"SNV","C","T","Heterozygous",11,22,50,1,0,11,0,38.18,11,25,3,3,0.69,0.23,0.16,"no","C/T","No",1,89.68,"XP_972482.1:c.482G>A","XP_972482.1:p.Ser161Asn","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1065,"NC_007423.3",7025651,"SNV","C","T","Heterozygous",12,25,48,1,0,12,0,37.83,12,25,3,3,-0.49,0.13,0.19,"no","C/T","No",1,96.17,"XP_972482.1:c.473G>A","XP_972482.1:p.Arg158His","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1066,"NC_007423.3",7065318,"SNV","A","T","Heterozygous",17,22,77.27,0.97,7,14,0.33,39.53,21,28,5,11,-1.1,0.86,1,"no","A/T","No",1,15.54,"XP_015838033.1:c.1157A>T","XP_015838033.1:p.Gln386Leu","LOC654887",654887,null,"654887 [Gene Symbol: LOC654887] [Locus Tag: TcasGA2_TC006307] [Chromosome: LG8] [Map Location: ] [Description: probable tRNA (guanine(26)-N(2))-dimethyltransferase] [Gene Type: protein-coding]","TcasGA2_TC006307; LOC654887"]
[1067,"NC_007423.3",7094578,"SNV","C","G","Heterozygous",9,28,32.14,1,7,5,0.42,36.22,12,39,6,8,-0.39,0.33,1,"no","C/G","No",1,50.17,"XP_008196695.1:c.5006C>G","XP_008196695.1:p.Ala1669Gly","LOC655218",655218,null,"655218 [Gene Symbol: LOC655218] [Locus Tag: TcasGA2_TC006310] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase ATR] [Gene Type: protein-coding]","LOC655218; TcasGA2_TC006310; ATR; mei-41"]
[1068,"NC_007423.3","7119906^7119907","Insertion","-","AAG","Homozygous",23,24,95.83,1,12,18,0.4,37.8,30,32,12,16,null,1,1,"no","AAG/AAG","No",1,200,"XP_008196698.1:c.1297_1298insAAG","XP_008196698.1:p.Glu436_Lys437insGlu","LOC655542",655542,null,"655542 [Gene Symbol: LOC655542] [Locus Tag: TcasGA2_TC006313] [Chromosome: LG8] [Map Location: ] [Description: ribosome biogenesis protein BMS1 homolog] [Gene Type: protein-coding]","TcasGA2_TC006313; LOC655542"]
[1069,"NC_007423.3",7142079,"SNV","G","C","Homozygous",32,32,100,1,5,27,0.16,35.34,32,32,11,13,null,1,1,"no","C/C","No",1,116.99,"XP_976162.1:c.1251G>C","XP_976162.1:p.Glu417Asp","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1070,"NC_007423.3",7144080,"SNV","G","C","Heterozygous",10,22,45.45,1,7,3,0.3,39.6,10,26,5,9,null,0.17,0.91,"no","C/T","No",1,80.88,"XP_976162.1:c.3114G>C","XP_976162.1:p.Glu1038Asp","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1071,"NC_007423.3",7144080,"SNV","G","T","Heterozygous",12,22,54.55,1,8,8,0.5,38.58,16,26,4,9,null,0.21,0.98,"no","C/T","No",1,80.88,"XP_976162.1:c.3114G>T","XP_976162.1:p.Glu1038Asp","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1072,"NC_007423.3",7145538,"SNV","G","A","Homozygous",29,29,100,1,10,22,0.31,38.45,32,32,12,16,null,1,1,"no","A/A","No",1,109.57,"XP_976162.1:c.4085G>A","XP_976162.1:p.Arg1362Lys","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1073,"NC_007423.3",7145561,"SNV","T","A","Heterozygous",13,39,33.33,1,6,9,0.4,38.85,15,41,7,8,1.62,0.19,0.68,"no","A/T","No",1,70.21,"XP_976162.1:c.4108T>A","XP_976162.1:p.Ser1370Thr","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1074,"NC_007423.3",7147341,"SNV","G","A","Heterozygous",5,22,22.73,0.97,4,1,0.2,39.4,5,22,2,5,2.74,0.61,0.93,"no","A/G","No",1,15.57,"XP_976162.1:c.5839G>A","XP_976162.1:p.Ala1947Thr","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1075,"NC_007423.3",7236906,"Deletion","G","-","Homozygous",20,20,100,1,8,19,0.3,38.15,27,27,6,12,null,1,1,"no","-/-","No",1,88.98,"XP_015838212.1:c.541delG","XP_015838212.1:p.Ala182fs","LOC657509",657509,null,"657509 [Gene Symbol: LOC657509] [Locus Tag: TcasGA2_TC006326] [Chromosome: LG8] [Map Location: ] [Description: multiple inositol polyphosphate phosphatase 1] [Gene Type: protein-coding]","LOC657509; TcasGA2_TC006326"]
[1076,"NC_007423.3",7313363,"SNV","T","A","Homozygous",26,26,100,1,14,23,0.38,35.62,37,37,10,9,null,1,1,"no","A/A","No",1,100.55,"XP_969567.1:c.895A>T","XP_969567.1:p.Thr299Ser","LOC658061",658061,null,"658061 [Gene Symbol: LOC658061] [Locus Tag: TcasGA2_TC005814] [Chromosome: LG8] [Map Location: ] [Description: 72 kDa inositol polyphosphate 5-phosphatase] [Gene Type: protein-coding]","LOC658061; TcasGA2_TC005814"]
[1077,"NC_007423.3",7316609,"SNV","T","C","Homozygous",20,20,100,1,12,10,0.45,36.5,22,22,8,17,null,1,1,"no","C/C","No",1,80.88,"XP_969645.1:c.166T>C","XP_969645.1:p.Ser56Pro","LOC658143",658143,null,"658143 [Gene Symbol: LOC658143] [Locus Tag: TcasGA2_TC006331] [Chromosome: LG8] [Map Location: ] [Description: hrp65 protein] [Gene Type: protein-coding]","TcasGA2_TC006331; LOC658143"]
[1078,"NC_007423.3",7394256,"SNV","T","C","Homozygous",29,29,100,1,22,17,0.44,37.59,39,39,10,14,null,1,1,"no","C/C","No",1,107.97,"XP_008196732.1:c.[341T>C]; XP_008196731.1:c.[350T>C]","XP_008196732.1:p.[Leu114Pro]; XP_008196731.1:p.[Leu117Pro]","LOC103313938",103313938,null,"103313938 [Gene Symbol: LOC103313938] [Locus Tag: TcasGA2_TC006340] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313938] [Gene Type: protein-coding]","LOC103313938; TcasGA2_TC006340"]
[1079,"NC_007423.3",7411631,"SNV","G","T","Heterozygous",5,20,25,0.98,3,5,0.38,34.6,8,32,2,1,-2.09,0.2,0.85,"no","G/T","No",1,16.33,"XP_015838125.1:c.[647C>A]; XP_015838124.1:c.[647C>A]; XP_015838123.1:c.[647C>A]; XP_015838122.1:c.[647C>A]","XP_015838125.1:p.[Thr216Asn]; XP_015838124.1:p.[Thr216Asn]; XP_015838123.1:p.[Thr216Asn]; XP_015838122.1:p.[Thr216Asn]","LOC107398474",107398474,null,"107398474 [Gene Symbol: LOC107398474] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sialin-like] [Gene Type: protein-coding]","LOC107398474"]
[1080,"NC_007423.3",7428656,"SNV","T","C","Homozygous",22,22,100,1,18,4,0.18,37.64,22,22,11,15,null,1,1,"no","C/C","No",1,86.9,"XP_015838038.1:c.6028A>G","XP_015838038.1:p.Ile2010Val","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1081,"NC_007423.3",7428770,"SNV","T","C","Homozygous",27,27,100,1,13,14,0.48,38.07,27,27,13,16,null,1,1,"no","C/C","No",1,101.94,"XP_015838038.1:c.5914A>G","XP_015838038.1:p.Thr1972Ala","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1082,"NC_007423.3",7428777,"SNV","T","C","Homozygous",28,28,100,1,13,15,0.46,36.61,28,28,14,16,null,1,1,"no","C/C","No",1,104.95,"XP_015838038.1:c.5907A>G","XP_015838038.1:p.Ile1969Met","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1083,"NC_007423.3",7434828,"SNV","G","A","Heterozygous",15,20,75,0.99,15,6,0.29,39.27,21,26,7,7,-0.26,0.68,0.98,"no","A/G","No",1,22.6,"XP_015838038.1:c.175C>T","XP_015838038.1:p.Pro59Ser","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1084,"NC_007423.3",7434837,"SNV","C","T","Homozygous",20,20,100,1,20,7,0.26,38.3,27,27,8,11,null,1,1,"no","T/T","No",1,82.52,"XP_015838038.1:c.166G>A","XP_015838038.1:p.Glu56Lys","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1085,"NC_007423.3",7439024,"SNV","C","T","Homozygous",20,20,100,1,7,16,0.3,35.45,23,23,7,11,null,1,1,"no","T/T","No",1,82.52,"XP_015838039.1:c.1601G>A","XP_015838039.1:p.Arg534His","LOC107398453",107398453,null,"107398453 [Gene Symbol: LOC107398453] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: polycystic kidney disease protein 1-like 2] [Gene Type: protein-coding]","LOC107398453"]
[1086,"NC_007423.3",7440594,"SNV","G","T","Homozygous",20,20,100,1,6,18,0.25,36.7,24,24,7,5,null,1,1,"no","T/T","No",1,82.52,"XP_015838039.1:c.131C>A","XP_015838039.1:p.Ala44Asp","LOC107398453, LOC107398491","107398453 , 107398491",null,"107398453 [Gene Symbol: LOC107398453] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: polycystic kidney disease protein 1-like 2] [Gene Type: protein-coding] || 107398491 [Gene Symbol: LOC107398491] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sperm receptor for egg jelly-like] [Gene Type: protein-coding]","LOC107398453 || LOC107398491"]
[1087,"NC_007423.3",7445762,"SNV","C","G","Heterozygous",14,23,60.87,1,12,2,0.14,40,14,29,6,12,2.8,0.59,0.76,"no","C/G","No",1,54.35,"XP_008196749.1:c.454G>C","XP_008196749.1:p.Asp152His","LOC659665",659665,null,"659665 [Gene Symbol: LOC659665] [Locus Tag: TcasGA2_TC005802] [Chromosome: LG8] [Map Location: ] [Description: GPI inositol-deacylase] [Gene Type: protein-coding]","LOC659665; TcasGA2_TC005802"]
[1088,"NC_007423.3",7458777,"SNV","T","C","Heterozygous",10,24,41.67,1,7,3,0.3,36.6,10,27,3,6,-1.32,0.14,0.53,"no","C/T","No",1,75.31,"XP_971167.2:c.566A>G","XP_971167.2:p.Asn189Ser","LOC659802",659802,null,"659802 [Gene Symbol: LOC659802] [Locus Tag: TcasGA2_TC030778] [Chromosome: LG8] [Map Location: ] [Description: SET and MYND domain-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC030778; LOC659802"]
[1089,"NC_007423.3",7458785,"SNV","A","T","Heterozygous",10,24,41.67,1,7,3,0.3,36.2,10,27,3,6,-0.12,0.13,0.53,"no","A/T","No",1,73.78,"XP_971167.2:c.558T>A","XP_971167.2:p.Asn186Lys","LOC659802",659802,null,"659802 [Gene Symbol: LOC659802] [Locus Tag: TcasGA2_TC030778] [Chromosome: LG8] [Map Location: ] [Description: SET and MYND domain-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC030778; LOC659802"]
[1090,"NC_007423.3",7541867,"SNV","A","G","Homozygous",20,20,100,1,13,16,0.45,35.8,29,29,7,7,null,1,1,"no","G/G","No",1,80.87,"XP_008196751.1:c.19A>G","XP_008196751.1:p.Thr7Ala","LOC660497",660497,null,"660497 [Gene Symbol: LOC660497] [Locus Tag: TcasGA2_TC006345] [Chromosome: LG8] [Map Location: ] [Description: dynein regulatory complex protein 1 homolog] [Gene Type: protein-coding]","LOC660497; TcasGA2_TC006345"]
[1091,"NC_007423.3",7756249,"SNV","G","T","Homozygous",25,25,100,1,21,6,0.22,38.04,27,27,12,16,null,1,1,"no","T/T","No",1,97.56,"XP_008196758.1:c.1735C>A","XP_008196758.1:p.Arg579Ser","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1092,"NC_007423.3",7756267,"SNV","C","G","Homozygous",20,20,100,1,17,5,0.23,36.65,22,22,9,14,null,1,1,"no","G/G","No",1,80.88,"XP_008196758.1:c.1717G>C","XP_008196758.1:p.Glu573Gln","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1093,"NC_007423.3",7841222,"SNV","G","T","Heterozygous",13,26,50,1,9,7,0.44,38.46,16,29,8,8,2.21,0.76,0.91,"no","G/T","No",1,100.95,"XP_015838157.1:c.[4223G>T]; XP_015838156.1:c.[4370G>T]; XP_008196764.1:c.[4241G>T]; XP_008196763.1:c.[4631G>T]; XP_008196762.1:c.[4631G>T]","XP_015838157.1:p.[Ser1408Ile]; XP_015838156.1:p.[Ser1457Ile]; XP_008196764.1:p.[Ser1414Ile]; XP_008196763.1:p.[Ser1544Ile]; XP_008196762.1:p.[Ser1544Ile]","LOC661278",661278,null,"661278 [Gene Symbol: LOC661278] [Locus Tag: TcasGA2_TC006356] [Chromosome: LG8] [Map Location: ] [Description: protein split ends] [Gene Type: protein-coding]","LOC661278; TcasGA2_TC006356"]
[1094,"NC_007423.3",7844659,"SNV","C","G","Homozygous",21,22,95.45,1,13,9,0.41,37.33,22,23,12,13,null,1,1,"no","G/G","No",1,55.17,"XP_008196764.1:c.[7678C>G]; XP_008196762.1:c.[8068C>G]; XP_008196763.1:c.[8068C>G]; XP_015838156.1:c.[7807C>G]; XP_015838157.1:c.[7660C>G]","XP_008196764.1:p.[Gln2560Glu]; XP_008196762.1:p.[Gln2690Glu]; XP_008196763.1:p.[Gln2690Glu]; XP_015838156.1:p.[Gln2603Glu]; XP_015838157.1:p.[Gln2554Glu]","LOC661278",661278,null,"661278 [Gene Symbol: LOC661278] [Locus Tag: TcasGA2_TC006356] [Chromosome: LG8] [Map Location: ] [Description: protein split ends] [Gene Type: protein-coding]","LOC661278; TcasGA2_TC006356"]
[1095,"NC_007423.3",7845014,"SNV","C","G","Homozygous",26,26,100,1,26,5,0.16,35.69,31,31,10,20,null,1,1,"no","G/G","No",1,95.92,"XP_008196762.1:c.[8423C>G]; XP_015838156.1:c.[8162C>G]; XP_008196764.1:c.[8033C>G]; XP_015838157.1:c.[8015C>G]; XP_008196763.1:c.[8423C>G]","XP_008196762.1:p.[Ser2808Cys]; XP_015838156.1:p.[Ser2721Cys]; XP_008196764.1:p.[Ser2678Cys]; XP_015838157.1:p.[Ser2672Cys]; XP_008196763.1:p.[Ser2808Cys]","LOC661278",661278,null,"661278 [Gene Symbol: LOC661278] [Locus Tag: TcasGA2_TC006356] [Chromosome: LG8] [Map Location: ] [Description: protein split ends] [Gene Type: protein-coding]","LOC661278; TcasGA2_TC006356"]
[1096,"NC_007423.3",7896527,"SNV","C","T","Heterozygous",56,83,67.47,1,30,37,0.45,36.93,67,102,26,28,-0.72,0.95,1,"no","C/T","No",1,127.98,"XP_015838210.1:c.[800C>T]; XP_972897.1:c.[800C>T]","XP_015838210.1:p.[Ser267Leu]; XP_972897.1:p.[Ser267Leu]","LOC661654",661654,null,"661654 [Gene Symbol: LOC661654] [Locus Tag: TcasGA2_TC006360] [Chromosome: LG8] [Map Location: ] [Description: translocation protein SEC62] [Gene Type: protein-coding]","TcasGA2_TC006360; LOC661654"]
[1097,"NC_007423.3","7896628^7896629","Insertion","-","AGA","Heterozygous",93,122,76.23,1,56,58,0.49,36.8,114,146,38,50,3.46,0.99,1,"no","complex","No",1,200,"XP_972897.1:c.[850_851insAGA]; XP_015838210.1:c.[850_851insAGA]","XP_972897.1:p.[Lys290_Asp291insLys]; XP_015838210.1:p.[Lys290_Asp291insLys]","LOC661654",661654,null,"661654 [Gene Symbol: LOC661654] [Locus Tag: TcasGA2_TC006360] [Chromosome: LG8] [Map Location: ] [Description: translocation protein SEC62] [Gene Type: protein-coding]","TcasGA2_TC006360; LOC661654"]
[1098,"NC_007423.3",7897455,"SNV","T","C","Heterozygous",37,57,64.91,1,13,26,0.33,36.41,39,61,17,22,-0.75,0.88,1,"no","C/T","No",1,108.99,"XP_972934.1:c.343A>G","XP_972934.1:p.Thr115Ala","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1099,"NC_007423.3",7897510,"SNV","G","T","Heterozygous",51,66,77.27,1,30,38,0.44,38.24,68,87,25,29,-0.92,0.83,0.95,"no","G/T","No",1,23.57,"XP_972934.1:c.288C>A","XP_972934.1:p.Asp96Glu","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1100,"NC_007423.3","7897735..7897739","Replacement","GGGAG","TTT","Homozygous",30,31,96.77,1,7,28,0.2,38.98,35,37,16,18,null,1,1,"no","TTT/TTT","No",1,200,"XP_972934.1:c.113_117delCTCCCinsAAA","XP_972934.1:p.Thr38fs","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1101,"NC_007423.3",7899305,"SNV","G","T","Homozygous",31,37,83.78,0.92,28,7,0.2,37.48,35,41,15,22,-0.47,0.85,0.92,"no","T/T","No",1,11.01,"XP_972934.1:c.58C>A","XP_972934.1:p.Leu20Ile","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1102,"NC_007423.3",7899341,"SNV","C","T","Heterozygous",42,53,79.25,0.84,34,18,0.35,38.1,52,65,23,25,0.2,0.98,1,"no","C/T","No",1,8.06,"XP_972934.1:c.22G>A","XP_972934.1:p.Asp8Asn","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1103,"NC_007423.3",7899922,"SNV","C","T","Heterozygous",17,68,25,1,1,16,0.06,38.47,17,75,7,11,0.79,{"v":0.006,"d":"6.00E-03"},0.03,"no","C/T","No",1,40.15,"XP_972976.2:c.2537G>A","XP_972976.2:p.Arg846Lys","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1104,"NC_007423.3",7900173,"SNV","T","G","Homozygous",95,95,100,1,46,54,0.46,37.28,100,100,40,48,null,1,1,"no","G/G","No",1,200,"XP_972976.2:c.2286A>C","XP_972976.2:p.Gln762His","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1105,"NC_007423.3",7900229,"SNV","C","A","Homozygous",67,84,79.76,0.54,33,42,0.44,36.94,75,95,29,30,-0.01,1,1,"no","A/A","No",1,3.36,"XP_972976.2:c.2230G>T","XP_972976.2:p.Asp744Tyr","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1106,"NC_007423.3",7900366,"SNV","C","G","Heterozygous",70,90,77.78,0.99,47,39,0.45,37.4,86,113,32,46,0.21,0.99,1,"no","C/G","No",1,18.25,"XP_972976.2:c.2093G>C","XP_972976.2:p.Gly698Ala","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1107,"NC_007423.3",7900379,"SNV","G","A","Heterozygous",18,81,22.22,0.98,9,15,0.38,36.56,24,110,8,13,-0.26,0.1,0.71,"no","A/G","No",1,16.87,"XP_972976.2:c.2080C>T","XP_972976.2:p.Pro694Ser","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1108,"NC_007423.3",7900783,"SNV","C","T","Homozygous",55,58,94.83,1,21,41,0.34,37.07,62,65,23,29,null,1,1,"no","T/T","No",1,108.8,"XP_972976.2:c.1723G>A","XP_972976.2:p.Asp575Asn","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1109,"NC_007423.3",7901948,"SNV","G","A","Homozygous",57,64,89.06,1,45,19,0.3,35.98,64,73,28,43,null,0.98,1,"no","A/A","No",1,74.5,"XP_972976.2:c.1166C>T","XP_972976.2:p.Ala389Val","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1110,"NC_007423.3",7902275,"SNV","C","T","Homozygous",63,63,100,1,30,37,0.45,36.62,67,67,28,35,null,1,1,"no","T/T","No",1,200,"XP_972976.2:c.839G>A","XP_972976.2:p.Gly280Asp","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1111,"NC_007423.3",7902914,"SNV","C","T","Heterozygous",23,78,29.49,1,17,7,0.29,36.26,24,91,11,14,-0.82,0.03,0.18,"no","C/T","No",1,88.86,"XP_972976.2:c.247G>A","XP_972976.2:p.Ala83Thr","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1112,"NC_007423.3",7902974,"SNV","T","C","Homozygous",81,97,83.51,1,43,46,0.48,38.07,89,107,30,51,-0.64,1,1,"no","C/C","No",1,53.41,"XP_972976.2:c.187A>G","XP_972976.2:p.Lys63Glu","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1113,"NC_007423.3",7903100,"SNV","T","C","Heterozygous",53,76,69.74,1,23,35,0.4,37.53,58,84,24,30,-0.6,0.87,0.99,"no","C/T","No",1,94.23,"XP_972976.2:c.110A>G","XP_972976.2:p.Tyr37Cys","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1114,"NC_007423.3",8108882,"SNV","C","G","Heterozygous",4,20,20,0.93,4,0,0,35,4,22,1,2,null,0.04,0.09,"no","G/T","No",1,11.5,"XP_973544.3:c.1726G>C","XP_973544.3:p.Ala576Pro","LOC662350",662350,null,"662350 [Gene Symbol: LOC662350] [Locus Tag: TcasGA2_TC005764] [Chromosome: LG8] [Map Location: ] [Description: structural maintenance of chromosomes protein 6] [Gene Type: protein-coding]","smc6; TcasGA2_TC005764; LOC662350"]
[1115,"NC_007423.3",8108882,"SNV","C","T","Heterozygous",16,20,80,0.93,4,14,0.22,37.25,18,22,7,14,null,0.7,0.79,"no","G/T","No",1,11.5,"XP_973544.3:c.1726G>A","XP_973544.3:p.Ala576Thr","LOC662350",662350,null,"662350 [Gene Symbol: LOC662350] [Locus Tag: TcasGA2_TC005764] [Chromosome: LG8] [Map Location: ] [Description: structural maintenance of chromosomes protein 6] [Gene Type: protein-coding]","smc6; TcasGA2_TC005764; LOC662350"]
[1116,"NC_007423.3",8225605,"SNV","G","C","Homozygous",23,23,100,1,8,16,0.33,36.74,24,24,11,12,null,1,1,"no","C/C","No",1,89.91,"XP_008196886.1:c.201C>G","XP_008196886.1:p.Ser67Arg","LOC103313989",103313989,null,"103313989 [Gene Symbol: LOC103313989] [Locus Tag: TcasGA2_TC005755] [Chromosome: LG8] [Map Location: ] [Description: RE1-silencing transcription factor] [Gene Type: protein-coding]","LOC103313989; TcasGA2_TC005755"]
[1117,"NC_007423.3",8252952,"SNV","C","T","Heterozygous",8,20,40,1,4,6,0.4,37,10,22,4,6,-0.69,0.52,0.76,"no","C/T","No",1,59.24,"XP_008196805.1:c.803G>A","XP_008196805.1:p.Arg268Lys","LOC103313952",103313952,null,"103313952 [Gene Symbol: LOC103313952] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: antichymotrypsin-2] [Gene Type: protein-coding]","serpin14; LOC103313952"]
[1118,"NC_007423.3",8281548,"SNV","G","C","Heterozygous",13,22,59.09,1,12,5,0.29,36.92,17,26,5,9,-2,0.13,0.59,"no","C/G","No",1,66.87,"XP_008196808.1:c.[905C>G]; XP_008196807.1:c.[905C>G]","XP_008196808.1:p.[Thr302Arg]; XP_008196807.1:p.[Thr302Arg]","LOC103313954",103313954,null,"103313954 [Gene Symbol: LOC103313954] [Locus Tag: TcasGA2_TC005739] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313954; TcasGA2_TC005739"]
[1119,"NC_007423.3",8281914,"SNV","A","G","Heterozygous",19,37,51.35,1,11,14,0.44,37.53,25,43,10,13,-2.6,0.8,1,"no","A/G","No",1,139.13,"XP_008196807.1:c.[539T>C]; XP_008196808.1:c.[539T>C]","XP_008196807.1:p.[Leu180Pro]; XP_008196808.1:p.[Leu180Pro]","LOC103313954",103313954,null,"103313954 [Gene Symbol: LOC103313954] [Locus Tag: TcasGA2_TC005739] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313954; TcasGA2_TC005739"]
[1120,"NC_007423.3",8352306,"SNV","G","C","Homozygous",20,20,100,1,6,14,0.3,37.2,20,20,6,11,null,1,1,"no","C/C","No",1,80.88,"XP_015838044.1:c.3989C>G","XP_015838044.1:p.Ser1330Cys","LOC103313993",103313993,null,"103313993 [Gene Symbol: LOC103313993] [Locus Tag: TcasGA2_TC005735] [Chromosome: LG8] [Map Location: ] [Description: sperm flagellar protein 2] [Gene Type: protein-coding]","TcasGA2_TC005735; LOC103313993"]
[1121,"NC_007423.3",8367524,"SNV","T","C","Homozygous",20,20,100,1,11,9,0.45,37.7,20,20,8,10,null,1,1,"no","C/C","No",1,80.88,"NP_001103248.1:c.452T>C","NP_001103248.1:p.Ile151Thr","Tcas_11340",663425,"cys-loop ligand-gated ion channel subunit","663425 [Gene Symbol: Tcas_11340] [Locus Tag: TcasGA2_TC006391] [Chromosome: LG8] [Map Location: ] [Description: cys-loop ligand-gated ion channel subunit] [Gene Type: protein-coding]","Tcas_11340; TcasGA2_TC006391"]
[1122,"NC_007423.3",8566407,"SNV","T","G","Heterozygous",12,20,60,1,5,12,0.29,36.83,17,31,5,6,1.7,0.86,0.86,"no","G/T","No",1,54.54,"XP_975143.1:c.1590A>C","XP_975143.1:p.Lys530Asn","LOC664029",664029,null,"664029 [Gene Symbol: LOC664029] [Locus Tag: TcasGA2_TC005714] [Chromosome: LG8] [Map Location: ] [Description: 2-hydroxyacyl-CoA lyase 1] [Gene Type: protein-coding]","LOC664029; TcasGA2_TC005714"]
[1123,"NC_007423.3",8835964,"SNV","T","C","Homozygous",24,24,100,1,11,18,0.38,39.79,29,29,9,12,null,1,1,"no","C/C","No",1,92.92,"XP_008196859.1:c.[103A>G]; XP_008196858.1:c.[118A>G]","XP_008196859.1:p.[Ser35Gly]; XP_008196858.1:p.[Ser40Gly]","LOC664097",664097,null,"664097 [Gene Symbol: LOC664097] [Locus Tag: TcasGA2_TC005702] [Chromosome: LG8] [Map Location: ] [Description: polypeptide N-acetylgalactosaminyltransferase 1] [Gene Type: protein-coding]","LOC664097; TcasGA2_TC005702"]
[1124,"NC_007423.3",9356302,"SNV","G","A","Homozygous",21,21,100,1,18,12,0.4,37.81,30,30,13,15,null,1,1,"no","A/A","No",1,85.5,"XP_008194619.1:c.425G>A","XP_008194619.1:p.Gly142Glu","LOC103313359",103313359,null,"103313359 [Gene Symbol: LOC103313359] [Locus Tag: TcasGA2_TC015231] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: chaoptin] [Gene Type: protein-coding]","LOC103313359; TcasGA2_TC015231"]
[1125,"NC_007423.3",9371881,"SNV","G","A","Heterozygous",12,22,54.55,1,8,9,0.47,36.83,17,31,6,10,-0.43,1,1,"no","A/G","No",1,80.78,"XP_015838168.1:c.[814G>A]; XP_008194603.1:c.[814G>A]; XP_008194602.1:c.[835G>A]; XP_008194604.1:c.[679G>A]","XP_015838168.1:p.[Ala272Thr]; XP_008194603.1:p.[Ala272Thr]; XP_008194602.1:p.[Ala279Thr]; XP_008194604.1:p.[Ala227Thr]","LOC660719",660719,null,"660719 [Gene Symbol: LOC660719] [Locus Tag: TcasGA2_TC015234] [Chromosome: LG8] [Map Location: ] [Description: chorion peroxidase] [Gene Type: protein-coding]","LOC660719; TcasGA2_TC015234"]
[1126,"NC_007423.3",9374095,"SNV","T","G","Heterozygous",9,27,33.33,1,0,9,0,38.78,9,27,5,3,-0.44,0.26,0.2,"no","G/T","No",1,55.59,"XP_008194603.1:c.[2848T>G]; XP_015838168.1:c.[2848T>G]; XP_008194602.1:c.[2869T>G]; XP_008194604.1:c.[2713T>G]","XP_008194603.1:p.[Ser950Ala]; XP_015838168.1:p.[Ser950Ala]; XP_008194602.1:p.[Ser957Ala]; XP_008194604.1:p.[Ser905Ala]","LOC660719",660719,null,"660719 [Gene Symbol: LOC660719] [Locus Tag: TcasGA2_TC015234] [Chromosome: LG8] [Map Location: ] [Description: chorion peroxidase] [Gene Type: protein-coding]","LOC660719; TcasGA2_TC015234"]
[1127,"NC_007423.3",9453628,"SNV","A","T","Homozygous",26,26,100,1,19,8,0.3,37.46,27,27,11,19,null,1,1,"no","T/T","No",1,100.57,"XP_015838046.1:c.4018A>T","XP_015838046.1:p.Thr1340Ser","LOC659859",659859,null,"659859 [Gene Symbol: LOC659859] [Locus Tag: TcasGA2_TC015245] [Chromosome: LG8] [Map Location: ] [Description: hornerin] [Gene Type: protein-coding]","TcasGA2_TC015245; LOC659859"]
[1128,"NC_007423.3",9457472,"SNV","G","T","Homozygous",22,22,100,1,10,16,0.38,39.14,26,26,10,11,null,1,1,"no","T/T","No",1,88.54,"XP_008194595.1:c.[711G>T]; XP_015838254.1:c.[711G>T]; XP_008194594.1:c.[711G>T]","XP_008194595.1:p.[Gln237His]; XP_015838254.1:p.[Gln237His]; XP_008194594.1:p.[Gln237His]","LOC103313346",103313346,null,"103313346 [Gene Symbol: LOC103313346] [Locus Tag: TcasGA2_TC015246] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313346] [Gene Type: protein-coding]","TcasGA2_TC015246; LOC103313346"]
[1129,"NC_007423.3",9490806,"SNV","C","G","Heterozygous",8,26,30.77,1,3,7,0.3,33.12,10,28,3,5,-3.19,0.06,0.19,"no","C/G","No",1,42.91,"XP_015838048.1:c.3584G>C","XP_015838048.1:p.Cys1195Ser","LOC658801",658801,null,"658801 [Gene Symbol: LOC658801] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: inverted formin-2-like] [Gene Type: protein-coding]","LOC658801"]
[1130,"NC_007423.3",9509978,"SNV","C","A","Heterozygous",8,22,36.36,1,6,2,0.25,39.62,8,26,3,6,2.87,0.13,0.8,"no","A/C","No",1,51.86,"XP_008194584.2:c.[259+1531C>A]; XP_015838134.1:c.[114C>A]; XP_008194583.2:c.[259+1531C>A]","XP_015838134.1:p.Phe38Leu","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1131,"NC_007423.3",9509994,"SNV","T","C","Heterozygous",6,21,28.57,1,6,0,0,38.67,6,22,1,4,1.83,0.06,0.09,"no","C/T","No",1,32.61,"XP_015838134.1:c.[130T>C]; XP_008194583.2:c.[259+1547T>C]; XP_008194584.2:c.[259+1547T>C]","XP_015838134.1:p.Cys44Arg","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1132,"NC_007423.3",9510033,"SNV","A","C","Heterozygous",6,24,25,1,6,0,0,34.5,6,24,1,4,-2.5,0.04,0.17,"no","A/C","No",1,25.95,"XP_015838134.1:c.[169A>C]; XP_008194584.2:c.[259+1586A>C]; XP_008194583.2:c.[259+1586A>C]","XP_015838134.1:p.Asn57His","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1133,"NC_007423.3",9510037,"SNV","C","T","Heterozygous",6,25,24,0.99,6,0,0,36.33,6,25,1,4,-0.32,0.01,0.15,"no","C/T","No",1,19.89,"XP_008194583.2:c.[259+1590C>T]; XP_008194584.2:c.[259+1590C>T]; XP_015838134.1:c.[173C>T]","XP_015838134.1:p.Ser58Leu","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1134,"NC_007423.3",9510127,"SNV","G","A","Heterozygous",7,25,28,1,6,2,0.25,39,8,27,6,5,1.54,0.58,0.84,"no","A/G","No",1,32.6,"XP_015838134.1:c.[263G>A]; XP_008194583.2:c.[259+1680G>A]; XP_008194584.2:c.[259+1680G>A]","XP_015838134.1:p.Arg88Lys","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1135,"NC_007423.3",9510130,"SNV","G","C","Heterozygous",6,23,26.09,1,5,3,0.38,38.67,8,26,5,5,0.7,0.59,0.97,"no","C/G","No",1,26.03,"XP_008194583.2:c.[259+1683G>C]; XP_015838134.1:c.[266G>C]; XP_008194584.2:c.[259+1683G>C]","XP_015838134.1:p.Arg89Thr","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1136,"NC_007423.3",9510184,"SNV","A","C","Heterozygous",5,23,21.74,0.97,3,4,0.43,36.6,7,29,5,5,0.37,0.22,1,"no","A/C","No",1,15.99,"XP_008194584.2:c.[259+1737A>C]; XP_015838134.1:c.[320A>C]; XP_008194583.2:c.[259+1737A>C]","XP_015838134.1:p.Glu107Ala","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1137,"NC_007423.3",9510221,"SNV","C","G","Heterozygous",6,28,21.43,0.94,0,6,0,38,6,28,3,1,-1.18,0.03,0.54,"no","C/G","No",1,12.09,"XP_008194583.2:c.[259+1774C>G]; XP_015838134.1:c.[357C>G]; XP_008194584.2:c.[259+1774C>G]","XP_015838134.1:p.Asn119Lys","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1138,"NC_007423.3",9510229,"SNV","T","C","Heterozygous",6,24,25,1,0,6,0,40,6,25,3,1,-0.4,0.25,0.81,"no","C/T","No",1,24.27,"XP_008194584.2:c.[259+1782T>C]; XP_008194583.2:c.[259+1782T>C]; XP_015838134.1:c.[365T>C]","XP_015838134.1:p.Val122Ala","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1139,"NC_007423.3",9555474,"SNV","G","A","Homozygous",21,21,100,1,14,15,0.48,37.38,29,29,10,11,null,1,1,"no","A/A","No",1,85.5,"XP_969480.1:c.283G>A","XP_969480.1:p.Val95Met","LOC657968",657968,null,"657968 [Gene Symbol: LOC657968] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: battenin-like] [Gene Type: protein-coding]","LOC657968"]
[1140,"NC_007423.3",9614323,"SNV","T","G","Homozygous",18,21,85.71,0.94,3,15,0.17,37.89,18,21,10,10,null,0.71,0.81,"no","G/G","No",1,12.4,"XP_008194575.1:c.[1126T>G]; XP_008194574.1:c.[1126T>G]","XP_008194575.1:p.[Leu376Val]; XP_008194574.1:p.[Leu376Val]","LOC103313338",103313338,null,"103313338 [Gene Symbol: LOC103313338] [Locus Tag: TcasGA2_TC015261] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: serendipity locus protein alpha] [Gene Type: protein-coding]","TcasGA2_TC015261; LOC103313338"]
[1141,"NC_007423.3",9631884,"SNV","A","T","Heterozygous",8,20,40,1,4,8,0.33,39.12,12,24,4,6,-0.77,0.9,1,"no","A/T","No",1,59.36,"XP_008194608.1:c.792T>A","XP_008194608.1:p.Asn264Lys","LOC656769",656769,null,"656769 [Gene Symbol: LOC656769] [Locus Tag: TcasGA2_TC015456] [Chromosome: LG8] [Map Location: ] [Description: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1] [Gene Type: protein-coding]","TcasGA2_TC015456; LOC656769"]
[1142,"NC_007423.3",9631887,"SNV","T","G","Heterozygous",8,20,40,1,4,8,0.33,39.12,12,24,4,6,-0.73,0.92,1,"no","G/T","No",1,62.31,"XP_008194608.1:c.789A>C","XP_008194608.1:p.Lys263Asn","LOC656769",656769,null,"656769 [Gene Symbol: LOC656769] [Locus Tag: TcasGA2_TC015456] [Chromosome: LG8] [Map Location: ] [Description: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1] [Gene Type: protein-coding]","TcasGA2_TC015456; LOC656769"]
[1143,"NC_007423.3",9631889,"SNV","T","C","Heterozygous",8,20,40,1,4,8,0.33,38.62,12,24,4,6,-1,0.92,1,"no","C/T","No",1,60.93,"XP_008194608.1:c.787A>G","XP_008194608.1:p.Lys263Glu","LOC656769",656769,null,"656769 [Gene Symbol: LOC656769] [Locus Tag: TcasGA2_TC015456] [Chromosome: LG8] [Map Location: ] [Description: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1] [Gene Type: protein-coding]","TcasGA2_TC015456; LOC656769"]
[1144,"NC_007423.3",9635480,"Deletion","G","-","Heterozygous",6,20,30,0.97,5,2,0.29,33.67,7,27,2,4,-2.31,0.1,0.77,"no","-/G","No",1,15.61,"XP_968291.1:c.477delC","XP_968291.1:p.Leu161fs","LOC656689",656689,null,"656689 [Gene Symbol: LOC656689] [Locus Tag: TcasGA2_TC015455] [Chromosome: LG8] [Map Location: ] [Description: venom carboxylesterase-6] [Gene Type: protein-coding]","TcasGA2_TC015455; LOC656689"]
[1145,"NC_007423.3",9644054,"SNV","G","T","Heterozygous",8,31,25.81,1,8,4,0.33,36.5,12,44,5,5,-1.24,0.31,0.75,"no","G/T","No",1,23.88,"XP_008194572.2:c.[1682C>A]; XP_008194571.2:c.[1682C>A]","XP_008194572.2:p.[Ala561Asp]; XP_008194571.2:p.[Ala561Asp]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1146,"NC_007423.3",9644058,"SNV","T","C","Heterozygous",8,31,25.81,1,8,4,0.33,37.25,12,45,5,5,-0.49,0.3,0.79,"no","C/T","No",1,36.34,"XP_008194571.2:c.[1678A>G]; XP_008194572.2:c.[1678A>G]","XP_008194571.2:p.[Lys560Glu]; XP_008194572.2:p.[Lys560Glu]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1147,"NC_007423.3",9644099,"SNV","T","G","Heterozygous",8,37,21.62,0.97,8,1,0.11,39.5,9,47,4,7,0.57,0.36,0.52,"no","G/T","No",1,15.07,"XP_008194571.2:c.[1637A>C]; XP_008194572.2:c.[1637A>C]","XP_008194571.2:p.[Asp546Ala]; XP_008194572.2:p.[Asp546Ala]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1148,"NC_007423.3",9644110,"SNV","C","G","Heterozygous",13,34,38.24,1,12,7,0.37,39.08,19,42,8,9,0.32,0.45,1,"no","C/G","No",1,84.55,"XP_008194572.2:c.[1626G>C]; XP_008194571.2:c.[1626G>C]","XP_008194572.2:p.[Glu542Asp]; XP_008194571.2:p.[Glu542Asp]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1149,"NC_007423.3",9644112,"SNV","C","G","Heterozygous",7,34,20.59,0.99,6,2,0.25,37.29,8,41,3,6,-1.33,0.09,0.91,"no","C/G","No",1,18.64,"XP_008194572.2:c.[1624G>C]; XP_008194571.2:c.[1624G>C]","XP_008194572.2:p.[Glu542Gln]; XP_008194571.2:p.[Glu542Gln]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1150,"NC_007423.3",9977947,"SNV","T","G","Heterozygous",7,24,29.17,1,3,4,0.43,38.29,7,27,4,7,-0.41,0.51,0.99,"no","G/T","No",1,38.38,"XP_008197059.1:c.458T>G","XP_008197059.1:p.Val153Gly","LOC657430",657430,null,"657430 [Gene Symbol: LOC657430] [Locus Tag: TcasGA2_TC006462] [Chromosome: LG8] [Map Location: ] [Description: exosome complex exonuclease RRP6] [Gene Type: protein-coding]","TcasGA2_TC006462; LOC657430"]
[1151,"NC_007423.3",10035527,"SNV","T","G","Heterozygous",11,21,52.38,1,7,4,0.36,38.64,11,23,6,8,-0.88,0.41,1,"no","G/T","No",1,77.19,"XP_008197062.1:c.51T>G","XP_008197062.1:p.Asp17Glu","LOC103314048",103314048,null,"103314048 [Gene Symbol: LOC103314048] [Locus Tag: TcasGA2_TC006464] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314048] [Gene Type: protein-coding]","LOC103314048; TcasGA2_TC006464"]
[1152,"NC_007423.3",10035534,"SNV","T","C","Heterozygous",11,21,52.38,1,7,4,0.36,38.73,11,23,6,8,-1.3,0.98,1,"no","C/T","No",1,81.76,"XP_008197062.1:c.58T>C","XP_008197062.1:p.Phe20Leu","LOC103314048",103314048,null,"103314048 [Gene Symbol: LOC103314048] [Locus Tag: TcasGA2_TC006464] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314048] [Gene Type: protein-coding]","LOC103314048; TcasGA2_TC006464"]
[1153,"NC_007423.3",10082444,"SNV","T","C","Homozygous",21,21,100,1,12,14,0.46,39.29,26,26,11,14,null,1,1,"no","C/C","No",1,83.89,"XP_008197063.1:c.670T>C","XP_008197063.1:p.Tyr224His","LOC658144",658144,null,"658144 [Gene Symbol: LOC658144] [Locus Tag: TcasGA2_TC006465] [Chromosome: LG8] [Map Location: ] [Description: myosin 15] [Gene Type: protein-coding]","LOC658144; Myo15; TcasGA2_TC006465"]
[1154,"NC_007423.3",10109829,"SNV","C","T","Homozygous",25,26,96.15,1,18,12,0.4,36.88,30,31,15,16,null,1,1,"no","T/T","No",1,66.78,"XP_969793.1:c.[156+1417C>T]; XP_015838225.1:c.[2987G>A]","XP_015838225.1:p.Arg996Gln","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1155,"NC_007423.3","10110387..10110388","MNV","AT","CC","Homozygous",24,24,100,1,6,18,0.25,35.55,24,24,9,14,null,1,1,"no","CC/CC","No",1,200,"XP_015838225.1:c.[2428_2429delATinsGG]; XP_969793.1:c.[156+1975_156+1976delATinsCC]","XP_015838225.1:p.Ile810Gly","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1156,"NC_007423.3",10124614,"SNV","C","G","Homozygous",25,25,100,1,11,17,0.39,38.56,28,28,9,10,null,1,1,"no","G/G","No",1,95.92,"XP_015838223.1:c.[5299G>C]; XP_008197064.1:c.[5542G>C]; XP_015838222.1:c.[5461G>C]","XP_015838223.1:p.[Val1767Leu]; XP_008197064.1:p.[Val1848Leu]; XP_015838222.1:p.[Val1821Leu]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1157,"NC_007423.3",10125133,"SNV","T","C","Homozygous",23,23,100,1,8,19,0.3,36.3,27,27,9,13,null,1,1,"no","C/C","No",1,89.9,"XP_008197064.1:c.[5023A>G]; XP_015838223.1:c.[4780A>G]; XP_015838222.1:c.[5023A>G]","XP_008197064.1:p.[Ile1675Val]; XP_015838223.1:p.[Ile1594Val]; XP_015838222.1:p.[Ile1675Val]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1158,"NC_007423.3",10134801,"SNV","G","A","Heterozygous",5,22,22.73,0.97,5,0,0,40.6,5,22,1,5,1.88,0.45,0.66,"no","A/G","No",1,15.56,"XP_015838223.1:c.[113C>T]; XP_008197064.1:c.[113C>T]; XP_015838222.1:c.[113C>T]","XP_015838223.1:p.[Thr38Ile]; XP_008197064.1:p.[Thr38Ile]; XP_015838222.1:p.[Thr38Ile]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1159,"NC_007423.3",10175285,"SNV","G","C","Heterozygous",20,25,80,0.85,15,13,0.46,37.6,28,36,7,12,-1.32,0.97,1,"no","C/G","No",1,8.12,"XP_970265.1:c.316G>C","XP_970265.1:p.Glu106Gln","LOC658815",658815,null,"658815 [Gene Symbol: LOC658815] [Locus Tag: TcasGA2_TC006470] [Chromosome: LG8] [Map Location: ] [Description: THO complex subunit 1] [Gene Type: protein-coding]","TcasGA2_TC006470; LOC658815"]
[1160,"NC_007423.3",10177074,"SNV","T","G","Homozygous",27,27,100,1,12,21,0.36,37.15,33,33,14,12,null,1,1,"no","G/G","No",1,101.94,"XP_008197071.1:c.1286A>C","XP_008197071.1:p.Lys429Thr","LOC658890",658890,null,"658890 [Gene Symbol: LOC658890] [Locus Tag: TcasGA2_TC005649] [Chromosome: LG8] [Map Location: ] [Description: zinc finger CCHC domain-containing protein 4] [Gene Type: protein-coding]","LOC658890; TcasGA2_TC005649"]
[1161,"NC_007423.3",10257150,"SNV","G","C","Homozygous",20,20,100,1,13,8,0.38,37.25,21,21,11,14,null,1,1,"no","C/C","No",1,80.88,"XP_015838160.1:c.[3780G>C]; XP_008197080.1:c.[3147G>C]; XP_970807.1:c.[4269G>C]","XP_015838160.1:p.[Glu1260Asp]; XP_008197080.1:p.[Glu1049Asp]; XP_970807.1:p.[Glu1423Asp]","LOC659405",659405,null,"659405 [Gene Symbol: LOC659405] [Locus Tag: TcasGA2_TC006477] [Chromosome: LG8] [Map Location: ] [Description: histone acetyltransferase KAT6A] [Gene Type: protein-coding]","LOC659405; TcasGA2_TC006477"]
[1162,"NC_007423.3",10261161,"SNV","G","C","Homozygous",24,29,82.76,0.7,8,16,0.33,37.92,24,29,7,9,-2.48,0.24,0.88,"no","C/C","No",1,5.28,"XP_970872.1:c.696C>G","XP_970872.1:p.Asn232Lys","LOC659475",659475,null,"659475 [Gene Symbol: LOC659475] [Locus Tag: TcasGA2_TC005644] [Chromosome: LG8] [Map Location: ] [Description: adenosine kinase] [Gene Type: protein-coding]","TcasGA2_TC005644; LOC659475"]
[1163,"NC_007423.3",10408311,"SNV","T","C","Homozygous",27,27,100,1,17,14,0.45,37.78,31,31,9,16,null,1,1,"no","C/C","No",1,101.95,"XP_971107.1:c.517A>G","XP_971107.1:p.Asn173Asp","LOC659737",659737,null,"659737 [Gene Symbol: LOC659737] [Locus Tag: TcasGA2_TC005641] [Chromosome: LG8] [Map Location: ] [Description: neuropeptide Y receptor] [Gene Type: protein-coding]","TcasGA2_TC005641; LOC659737"]
[1164,"NC_007423.3",10411022,"SNV","A","C","Homozygous",26,26,100,1,16,17,0.48,36.85,33,33,6,12,null,1,1,"no","C/C","No",1,98.94,"XP_015838220.1:c.[309T>G]; XP_008197087.1:c.[309T>G]","XP_015838220.1:p.[His103Gln]; XP_008197087.1:p.[His103Gln]","LOC659803",659803,null,"659803 [Gene Symbol: LOC659803] [Locus Tag: TcasGA2_TC005640] [Chromosome: LG8] [Map Location: ] [Description: protein NDNF] [Gene Type: protein-coding]","TcasGA2_TC005640; LOC659803"]
[1165,"NC_007423.3",10412233,"SNV","T","C","Homozygous",20,20,100,1,2,20,0.09,38.75,22,22,6,10,null,1,1,"no","C/C","No",1,80.88,"XP_015838220.1:c.[43A>G]; XP_008197087.1:c.[43A>G]","XP_015838220.1:p.[Ile15Val]; XP_008197087.1:p.[Ile15Val]","LOC659803",659803,null,"659803 [Gene Symbol: LOC659803] [Locus Tag: TcasGA2_TC005640] [Chromosome: LG8] [Map Location: ] [Description: protein NDNF] [Gene Type: protein-coding]","TcasGA2_TC005640; LOC659803"]
[1166,"NC_007423.3",10416566,"SNV","T","A","Heterozygous",5,24,20.83,0.91,4,2,0.33,36.2,6,29,3,5,-0.68,0.68,0.89,"no","A/T","No",1,10.29,"XP_015838307.1:c.742T>A","XP_015838307.1:p.Ser248Thr","LOC659872",659872,null,"659872 [Gene Symbol: LOC659872] [Locus Tag: TcasGA2_TC006482] [Chromosome: LG8] [Map Location: ] [Description: somatostatin receptor type 5] [Gene Type: protein-coding]","TcasGA2_TC006482; LOC659872"]
[1167,"NC_007423.3",10416755,"SNV","C","G","Heterozygous",12,30,40,1,4,8,0.33,39.58,12,32,5,5,1.61,0.09,0.93,"no","C/G","No",1,82.93,"XP_015838307.1:c.931C>G","XP_015838307.1:p.Leu311Val","LOC659872",659872,null,"659872 [Gene Symbol: LOC659872] [Locus Tag: TcasGA2_TC006482] [Chromosome: LG8] [Map Location: ] [Description: somatostatin receptor type 5] [Gene Type: protein-coding]","TcasGA2_TC006482; LOC659872"]
[1168,"NC_007423.3",10416771,"SNV","C","T","Heterozygous",14,27,51.85,1,5,11,0.31,38.21,16,33,8,6,0.68,0.1,1,"no","C/T","No",1,104.89,"XP_015838307.1:c.947C>T","XP_015838307.1:p.Thr316Ile","LOC659872",659872,null,"659872 [Gene Symbol: LOC659872] [Locus Tag: TcasGA2_TC006482] [Chromosome: LG8] [Map Location: ] [Description: somatostatin receptor type 5] [Gene Type: protein-coding]","TcasGA2_TC006482; LOC659872"]
[1169,"NC_007423.3",10422554,"SNV","A","T","Homozygous",20,20,100,1,10,10,0.5,39.35,20,20,9,13,null,1,1,"no","T/T","No",1,82.52,"XP_015838285.1:c.[269T>A]; XP_008197089.1:c.[266T>A]","XP_015838285.1:p.[Ile90Asn]; XP_008197089.1:p.[Ile89Asn]","LOC103314055",103314055,null,"103314055 [Gene Symbol: LOC103314055] [Locus Tag: TcasGA2_TC005637] [Chromosome: LG8] [Map Location: ] [Description: protein msta, isoform B] [Gene Type: protein-coding]","LOC103314055; TcasGA2_TC005637"]
[1170,"NC_007423.3",10485869,"SNV","G","C","Heterozygous",9,30,30,1,5,4,0.44,38.89,9,34,3,9,-0.52,0.35,0.99,"no","C/G","No",1,44.84,"XP_015838061.1:c.[225-6140C>G]; XP_008197099.2:c.[975C>G]","XP_008197099.2:p.Ile325Met","LOC661004",661004,null,"661004 [Gene Symbol: LOC661004] [Locus Tag: TcasGA2_TC005627] [Chromosome: LG8] [Map Location: ] [Description: espin] [Gene Type: protein-coding]","LOC661004; TcasGA2_TC005627"]
[1171,"NC_007423.3",10492101,"SNV","C","A","Heterozygous",9,25,36,1,9,0,0,37.22,9,27,3,7,-0.42,0.13,0.26,"no","A/C","No",1,53.5,"XP_015838061.1:c.193G>T","XP_015838061.1:p.Ala65Ser","LOC661004",661004,null,"661004 [Gene Symbol: LOC661004] [Locus Tag: TcasGA2_TC005627] [Chromosome: LG8] [Map Location: ] [Description: espin] [Gene Type: protein-coding]","LOC661004; TcasGA2_TC005627"]
[1172,"NC_007423.3",10492109,"SNV","G","T","Homozygous",23,23,100,1,17,6,0.26,36.91,23,23,10,16,null,1,1,"no","T/T","No",1,91.54,"XP_015838061.1:c.185C>A","XP_015838061.1:p.Thr62Asn","LOC661004",661004,null,"661004 [Gene Symbol: LOC661004] [Locus Tag: TcasGA2_TC005627] [Chromosome: LG8] [Map Location: ] [Description: espin] [Gene Type: protein-coding]","LOC661004; TcasGA2_TC005627"]
[1173,"NC_007423.3",10516447,"SNV","A","G","Heterozygous",15,20,75,0.99,8,14,0.36,36,22,30,6,6,-0.13,0.86,1,"no","A/G","No",1,21.08,"XP_015838077.1:c.[236T>C]; XP_008197103.1:c.[236T>C]; XP_015838080.1:c.[1078-12427T>C]; XP_972642.2:c.[1078-12427T>C]; XP_015838079.1:c.[1078-12427T>C]; XP_015838078.1:c.[1078-12427T>C]; XP_008197102.1:c.[236T>C]","XP_015838077.1:p.[Val79Ala]; XP_008197103.1:p.[Val79Ala]; XP_008197102.1:p.[Val79Ala]","LOC661389, LOC661279","661389 , 661279",null,"661389 [Gene Symbol: LOC661389] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: synaptotagmin 15] [Gene Type: protein-coding] || 661279 [Gene Symbol: LOC661279] [Locus Tag: TcasGA2_TC005624] [Chromosome: LG8] [Map Location: ] [Description: aldehyde dehydrogenase family 3 member B1] [Gene Type: protein-coding]","LOC661389; Syt15 || TcasGA2_TC005624; LOC661279"]
[1174,"NC_007423.3",10516487,"SNV","A","G","Heterozygous",10,26,38.46,1,6,10,0.38,36.1,16,32,5,5,0.53,0.38,0.52,"no","A/G","No",1,69.69,"XP_008197103.1:c.[196T>C]; XP_008197102.1:c.[196T>C]; XP_015838079.1:c.[1078-12467T>C]; XP_015838080.1:c.[1078-12467T>C]; XP_015838077.1:c.[196T>C]; XP_015838078.1:c.[1078-12467T>C]; XP_972642.2:c.[1078-12467T>C]","XP_008197103.1:p.[Phe66Leu]; XP_008197102.1:p.[Phe66Leu]; XP_015838077.1:p.[Phe66Leu]","LOC661389, LOC661279","661389 , 661279",null,"661389 [Gene Symbol: LOC661389] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: synaptotagmin 15] [Gene Type: protein-coding] || 661279 [Gene Symbol: LOC661279] [Locus Tag: TcasGA2_TC005624] [Chromosome: LG8] [Map Location: ] [Description: aldehyde dehydrogenase family 3 member B1] [Gene Type: protein-coding]","LOC661389; Syt15 || TcasGA2_TC005624; LOC661279"]
[1175,"NC_007423.3",10572542,"SNV","A","G","Heterozygous",5,21,23.81,0.99,0,5,0,39.8,5,26,1,1,1.98,0.08,0.57,"no","A/G","No",1,19.82,"XP_008197116.1:c.[1747+1226T>C]; XP_008197115.1:c.[1072T>C]; XP_008197112.1:c.[1786+5370T>C]; XP_015838057.1:c.[1120T>C]; XP_008197111.1:c.[1789+5370T>C]; XP_008197114.1:c.[1753+3136T>C]; XP_008197110.1:c.[1792+9376T>C]","XP_008197115.1:p.[Ser358Pro]; XP_015838057.1:p.[Ser374Pro]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1176,"NC_007423.3",10578960,"SNV","G","C","Heterozygous",14,20,70,1,12,5,0.29,35.43,17,23,7,8,-2.72,0.36,0.95,"no","C/G","No",1,34.12,"XP_008197111.1:c.[741C>G]; XP_008197112.1:c.[738C>G]; XP_008197110.1:c.[1792+2958C>G]","XP_008197111.1:p.[Cys247Trp]; XP_008197112.1:p.[Cys246Trp]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1177,"NC_007423.3",10578962,"SNV","A","G","Heterozygous",14,20,70,1,9,5,0.36,34.43,14,20,7,8,-2.43,0.19,0.91,"no","A/G","No",1,33.77,"XP_008197111.1:c.[739T>C]; XP_008197110.1:c.[1792+2956T>C]; XP_008197112.1:c.[736T>C]","XP_008197111.1:p.[Cys247Arg]; XP_008197112.1:p.[Cys246Arg]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1178,"NC_007423.3","10579011..10579012","MNV","AC","GT","Homozygous",27,32,84.38,1,14,18,0.44,36.8,32,37,10,19,null,0.36,0.98,"no","GT/GT","No",1,200,"XP_008197112.1:c.[686_687delGTinsAC]; XP_008197110.1:c.[1792+2906_1792+2907delGTinsAC]; XP_008197111.1:c.[689_690delGTinsAC]","XP_008197112.1:p.[Ser229Asn]; XP_008197111.1:p.[Ser230Asn]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1179,"NC_007423.3",10584318,"SNV","G","A","Heterozygous",7,20,35,1,7,2,0.22,33.14,9,28,4,5,-2.58,0.11,0.68,"no","A/G","No",1,46.59,"XP_008197106.1:c.[103G>A]; XP_008197107.1:c.[103G>A]; XP_008197108.1:c.[103G>A]","XP_008197106.1:p.[Ala35Thr]; XP_008197107.1:p.[Ala35Thr]; XP_008197108.1:p.[Ala35Thr]","LOC661565",661565,null,"661565 [Gene Symbol: LOC661565] [Locus Tag: TcasGA2_TC006494] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC661565; TcasGA2_TC006494"]
[1180,"NC_007423.3",10591332,"SNV","T","C","Heterozygous",10,20,50,1,6,10,0.38,37.4,16,29,3,5,-1.93,0.66,0.98,"no","C/T","No",1,82.46,"XP_972898.1:c.1775A>G","XP_972898.1:p.Lys592Arg","LOC661655",661655,null,"661655 [Gene Symbol: LOC661655] [Locus Tag: TcasGA2_TC005617] [Chromosome: LG8] [Map Location: ] [Description: DNA mismatch repair protein Mlh1] [Gene Type: protein-coding]","TcasGA2_TC005617; LOC661655"]
[1181,"NC_007423.3",10613048,"SNV","T","A","Homozygous",21,21,100,1,7,17,0.29,36.81,24,24,8,11,null,1,1,"no","A/A","No",1,85.5,"XP_015838055.1:c.[4687T>A]; XP_008197125.1:c.[4687T>A]; XP_008197127.1:c.[4687T>A]","XP_015838055.1:p.[Cys1563Ser]; XP_008197125.1:p.[Cys1563Ser]; XP_008197127.1:p.[Cys1563Ser]","LOC661900",661900,null,"661900 [Gene Symbol: LOC661900] [Locus Tag: TcasGA2_TC006498] [Chromosome: LG8] [Map Location: ] [Description: WD repeat-containing protein 81] [Gene Type: protein-coding]","TcasGA2_TC006498; LOC661900"]
[1182,"NC_007423.3","10643374..10643375","MNV","AC","GT","Heterozygous",16,21,76.19,1,3,13,0.19,38.34,16,23,6,8,0.1,0.52,0.71,"no","complex","No",1,200,"XP_973343.1:c.210_211delGTinsAC","XP_973343.1:p.Ser71Pro","LOC662133",662133,null,"662133 [Gene Symbol: LOC662133] [Locus Tag: TcasGA2_TC005609] [Chromosome: LG8] [Map Location: ] [Description: G2/mitotic-specific cyclin-A] [Gene Type: protein-coding]","TcasGA2_TC005609; LOC662133"]
[1183,"NC_007423.3",10648864,"SNV","C","T","Heterozygous",15,21,71.43,1,8,10,0.44,38.47,18,26,5,9,0.82,0.94,1,"no","C/T","No",1,32.61,"XP_008197135.1:c.[2936C>T]; XP_015838058.1:c.[2936C>T]; XP_015838059.1:c.[2924C>T]; XP_015838060.1:c.[2810C>T]","XP_008197135.1:p.[Ala979Val]; XP_015838058.1:p.[Ala979Val]; XP_015838059.1:p.[Ala975Val]; XP_015838060.1:p.[Ala937Val]","LOC662167",662167,null,"662167 [Gene Symbol: LOC662167] [Locus Tag: TcasGA2_TC006501] [Chromosome: LG8] [Map Location: ] [Description: E3 ubiquitin-protein ligase RBBP6] [Gene Type: protein-coding]","TcasGA2_TC006501; LOC662167"]
[1184,"NC_007423.3",10650098,"SNV","C","G","Homozygous",22,22,100,1,21,4,0.16,39.36,25,25,9,15,null,1,1,"no","G/G","No",1,86.9,"XP_015838060.1:c.[3992C>G]; XP_015838059.1:c.[4106C>G]; XP_015838058.1:c.[4118C>G]; XP_008197135.1:c.[4118C>G]","XP_015838060.1:p.[Thr1331Ser]; XP_015838059.1:p.[Thr1369Ser]; XP_015838058.1:p.[Thr1373Ser]; XP_008197135.1:p.[Thr1373Ser]","LOC662167",662167,null,"662167 [Gene Symbol: LOC662167] [Locus Tag: TcasGA2_TC006501] [Chromosome: LG8] [Map Location: ] [Description: E3 ubiquitin-protein ligase RBBP6] [Gene Type: protein-coding]","TcasGA2_TC006501; LOC662167"]
[1185,"NC_007423.3",10699149,"SNV","T","A","Homozygous",21,21,100,1,18,14,0.44,38.52,32,32,13,9,null,1,1,"no","A/A","No",1,85.5,"XP_973477.1:c.[757A>T]; XP_008197141.1:c.[346-4491T>A]","XP_973477.1:p.Ile253Phe","LOC103314059, LOC662274","103314059 , 662274",null,"103314059 [Gene Symbol: LOC103314059] [Locus Tag: TcasGA2_TC006502] [Chromosome: LG8] [Map Location: ] [Description: kielin/chordin-like protein] [Gene Type: protein-coding] || 662274 [Gene Symbol: LOC662274] [Locus Tag: TcasGA2_TC005605] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC662274] [Gene Type: protein-coding]","TcasGA2_TC006502; LOC103314059 || LOC662274; TcasGA2_TC005605"]
[1186,"NC_007423.3",10699967,"SNV","C","A","Homozygous",20,20,100,1,15,5,0.25,40.2,20,20,8,14,null,1,1,"no","A/A","No",1,82.49,"XP_008197141.1:c.[346-3673C>A]; XP_973477.1:c.[93G>T]","XP_973477.1:p.Lys31Asn","LOC103314059, LOC662274","103314059 , 662274",null,"103314059 [Gene Symbol: LOC103314059] [Locus Tag: TcasGA2_TC006502] [Chromosome: LG8] [Map Location: ] [Description: kielin/chordin-like protein] [Gene Type: protein-coding] || 662274 [Gene Symbol: LOC662274] [Locus Tag: TcasGA2_TC005605] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC662274] [Gene Type: protein-coding]","TcasGA2_TC006502; LOC103314059 || LOC662274; TcasGA2_TC005605"]
[1187,"NC_007423.3",10699969,"SNV","T","C","Homozygous",21,21,100,1,15,6,0.29,39.86,21,21,8,15,null,1,1,"no","C/C","No",1,83.89,"XP_973477.1:c.[91A>G]; XP_008197141.1:c.[346-3671T>C]","XP_973477.1:p.Lys31Glu","LOC103314059, LOC662274","103314059 , 662274",null,"103314059 [Gene Symbol: LOC103314059] [Locus Tag: TcasGA2_TC006502] [Chromosome: LG8] [Map Location: ] [Description: kielin/chordin-like protein] [Gene Type: protein-coding] || 662274 [Gene Symbol: LOC662274] [Locus Tag: TcasGA2_TC005605] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC662274] [Gene Type: protein-coding]","TcasGA2_TC006502; LOC103314059 || LOC662274; TcasGA2_TC005605"]
[1188,"NC_007423.3",10705813,"SNV","T","C","Heterozygous",14,23,60.87,1,12,6,0.33,35.86,18,27,9,9,-1.32,0.68,0.85,"no","C/T","No",1,66.46,"XP_973577.1:c.[622T>C]; XP_015838081.1:c.[622T>C]","XP_973577.1:p.[Ser208Pro]; XP_015838081.1:p.[Ser208Pro]","LOC662386",662386,null,"662386 [Gene Symbol: LOC662386] [Locus Tag: TcasGA2_TC006506] [Chromosome: LG8] [Map Location: ] [Description: bone morphogenetic protein 10] [Gene Type: protein-coding]","LOC662386; BMP9; Bmp10; TcasGA2_TC006506"]
[1189,"NC_007423.3",10706669,"SNV","T","C","Homozygous",20,20,100,1,8,15,0.35,36.7,23,23,10,11,null,1,1,"no","C/C","No",1,80.88,"XP_973610.2:c.2476A>G","XP_973610.2:p.Ile826Val","LOC662420",662420,null,"662420 [Gene Symbol: LOC662420] [Locus Tag: TcasGA2_TC005603] [Chromosome: LG8] [Map Location: ] [Description: microsomal triglyceride transfer protein large subunit] [Gene Type: protein-coding]","TcasGA2_TC005603; LOC662420"]
[1190,"NC_007423.3",10707509,"SNV","A","G","Homozygous",27,27,100,1,21,21,0.5,36.63,42,42,9,9,null,1,1,"no","G/G","No",1,101.95,"XP_973610.2:c.1682T>C","XP_973610.2:p.Val561Ala","LOC662420",662420,null,"662420 [Gene Symbol: LOC662420] [Locus Tag: TcasGA2_TC005603] [Chromosome: LG8] [Map Location: ] [Description: microsomal triglyceride transfer protein large subunit] [Gene Type: protein-coding]","TcasGA2_TC005603; LOC662420"]
[1191,"NC_007423.3",10712107,"SNV","C","A","Heterozygous",7,29,24.14,0.98,0,7,0,40.43,7,32,1,2,1.94,0.06,0.31,"no","A/C","No",1,16.86,"XP_008197143.1:c.1117C>A","XP_008197143.1:p.Leu373Ile","LOC662523",662523,null,"662523 [Gene Symbol: LOC662523] [Locus Tag: TcasGA2_TC006507] [Chromosome: LG8] [Map Location: ] [Description: cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B] [Gene Type: protein-coding]","TcasGA2_TC006507; LOC662523"]
[1192,"NC_007423.3",10856073,"SNV","G","C","Homozygous",22,22,100,1,22,3,0.12,38.41,25,25,8,16,null,1,1,"no","C/C","No",1,86.9,"XP_008197149.1:c.58G>C","XP_008197149.1:p.Ala20Pro","LOC662716",662716,null,"662716 [Gene Symbol: LOC662716] [Locus Tag: TcasGA2_TC006516] [Chromosome: LG8] [Map Location: ] [Description: ribokinase] [Gene Type: protein-coding]","TcasGA2_TC006516; LOC662716"]
[1193,"NC_007423.3",10896016,"SNV","A","G","Homozygous",22,22,100,1,13,11,0.46,37.5,24,24,8,13,null,1,1,"no","G/G","No",1,83.89,"XP_008197167.1:c.[1504A>G]; XP_015838147.1:c.[1504A>G]","XP_008197167.1:p.[Ile502Val]; XP_015838147.1:p.[Ile502Val]","LOC103314071",103314071,null,"103314071 [Gene Symbol: LOC103314071] [Locus Tag: TcasGA2_TC006520] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314071] [Gene Type: protein-coding]","TcasGA2_TC006520; LOC103314071"]
[1194,"NC_007423.3",10988953,"SNV","G","T","Homozygous",37,37,100,1,22,25,0.47,36.27,47,47,18,22,null,1,1,"no","T/T","No",1,133.68,"XP_008196908.1:c.[131C>A]; XP_966749.1:c.[81-170C>A]","XP_008196908.1:p.Thr44Asn","LOC655147",655147,null,"655147 [Gene Symbol: LOC655147] [Locus Tag: TcasGA2_TC005588] [Chromosome: LG8] [Map Location: ] [Description: macoilin] [Gene Type: protein-coding]","TcasGA2_TC005588; LOC655147"]
[1195,"NC_007423.3","11004028..11004029","MNV","GG","CA","Heterozygous",37,50,74,1,11,32,0.26,38.33,43,56,13,23,2.21,0.66,0.78,"no","complex","No",1,200,"XP_001807778.1:c.315_316delCCinsTG","XP_001807778.1:p.Leu106Val","LOC100142430",100142430,null,"100142430 [Gene Symbol: LOC100142430] [Locus Tag: TcasGA2_TC005585] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase alpha subunit B] [Gene Type: protein-coding]","TcasGA2_TC005585; LOC100142430"]
[1196,"NC_007423.3",11004034,"SNV","C","A","Homozygous",37,50,74,1,10,32,0.24,37.14,42,55,11,21,null,0.52,0.37,"no","A/C","No",1,42.97,"XP_001807778.1:c.310G>T","XP_001807778.1:p.Val104Phe","LOC100142430",100142430,null,"100142430 [Gene Symbol: LOC100142430] [Locus Tag: TcasGA2_TC005585] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase alpha subunit B] [Gene Type: protein-coding]","TcasGA2_TC005585; LOC100142430"]
[1197,"NC_007423.3",11008138,"SNV","C","A","Heterozygous",5,22,22.73,0.96,4,4,0.5,35.6,8,30,2,3,-1.68,0.19,0.95,"no","A/C","No",1,13.77,"XP_015838191.1:c.[3160G>T]; XP_015838190.1:c.[3160G>T]; XP_008196911.1:c.[3133G>T]","XP_015838191.1:p.[Glu1054*]; XP_015838190.1:p.[Glu1054*]; XP_008196911.1:p.[Glu1045*]","LOC655543",655543,null,"655543 [Gene Symbol: LOC655543] [Locus Tag: TcasGA2_TC005584] [Chromosome: LG8] [Map Location: ] [Description: transcription elongation factor SPT6] [Gene Type: protein-coding]","TcasGA2_TC005584; LOC655543"]
[1198,"NC_007423.3",11061756,"SNV","G","C","Heterozygous",13,30,43.33,1,9,9,0.5,38.08,18,40,6,8,2.01,0.65,1,"no","C/G","No",1,95.95,"XP_967920.2:c.380C>G","XP_967920.2:p.Thr127Ser","LOC656286",656286,null,"656286 [Gene Symbol: LOC656286] [Locus Tag: TcasGA2_TC005579] [Chromosome: LG8] [Map Location: ] [Description: protein atonal homolog 8] [Gene Type: protein-coding]","LOC656286; TcasGA2_TC005579"]
[1199,"NC_007423.3",11126686,"SNV","T","C","Homozygous",28,28,100,1,5,23,0.18,38.07,28,28,9,18,null,1,1,"no","C/C","No",1,104.94,"XP_968547.1:c.910A>G","XP_968547.1:p.Ile304Val","LOC656961",656961,null,"656961 [Gene Symbol: LOC656961] [Locus Tag: TcasGA2_TC005572] [Chromosome: LG8] [Map Location: ] [Description: TGF-beta activated kinase 1] [Gene Type: protein-coding]","Tak1; TcasGA2_TC005572; LOC656961"]
[1200,"NC_007423.3",11129351,"SNV","G","T","Heterozygous",7,20,35,1,7,0,0,39.14,7,20,1,5,-1.39,0.29,0.86,"no","G/T","No",1,41.7,"XP_008196925.1:c.728C>A","XP_008196925.1:p.Pro243His","LOC103314006",103314006,null,"103314006 [Gene Symbol: LOC103314006] [Locus Tag: TcasGA2_TC005571] [Chromosome: LG8] [Map Location: ] [Description: prohormone-2] [Gene Type: protein-coding]","TcasGA2_TC005571; LOC103314006"]
[1201,"NC_007423.3",11129502,"SNV","A","G","Homozygous",35,35,100,1,9,26,0.26,36.83,35,35,8,19,null,1,1,"no","G/G","No",1,126.02,"XP_008196925.1:c.577T>C","XP_008196925.1:p.Phe193Leu","LOC103314006",103314006,null,"103314006 [Gene Symbol: LOC103314006] [Locus Tag: TcasGA2_TC005571] [Chromosome: LG8] [Map Location: ] [Description: prohormone-2] [Gene Type: protein-coding]","TcasGA2_TC005571; LOC103314006"]
[1202,"NC_007423.3",11208133,"SNV","C","G","Homozygous",22,22,100,1,11,12,0.48,38.32,23,23,5,19,null,1,1,"no","G/G","No",1,86.9,"XP_008196927.2:c.[1328G>C]; XP_015838304.1:c.[1313G>C]","XP_008196927.2:p.[Ser443Thr]; XP_015838304.1:p.[Ser438Thr]","LOC657431",657431,null,"657431 [Gene Symbol: LOC657431] [Locus Tag: TcasGA2_TC005566] [Chromosome: LG8] [Map Location: ] [Description: runt-related transcription factor 2] [Gene Type: protein-coding]","LOC657431; TcasGA2_TC005566"]
[1203,"NC_007423.3",11257274,"SNV","C","T","Homozygous",20,20,100,1,4,17,0.19,37.6,21,21,8,10,null,1,1,"no","T/T","No",1,82.52,"XP_969277.1:c.1031C>T","XP_969277.1:p.Ala344Val","LOC657742",657742,null,"657742 [Gene Symbol: LOC657742] [Locus Tag: TcasGA2_TC006542] [Chromosome: LG8] [Map Location: ] [Description: runt] [Gene Type: protein-coding]","TcasGA2_TC006542; LOC657742; run"]
[1204,"NC_007423.3",11257303,"SNV","C","A","Heterozygous",7,23,30.43,1,7,0,0,38.86,7,26,1,5,1.8,0.04,0.21,"no","A/C","No",1,33.52,"XP_969277.1:c.1060C>A","XP_969277.1:p.His354Asn","LOC657742",657742,null,"657742 [Gene Symbol: LOC657742] [Locus Tag: TcasGA2_TC006542] [Chromosome: LG8] [Map Location: ] [Description: runt] [Gene Type: protein-coding]","TcasGA2_TC006542; LOC657742; run"]
[1205,"NC_007423.3",11391860,"SNV","T","A","Homozygous",20,20,100,1,14,12,0.46,36.6,26,26,12,16,null,1,1,"no","A/A","No",1,82.49,"XP_970808.1:c.[3018A>T]; XP_015838194.1:c.[3018A>T]; XP_008196944.1:c.[3018A>T]; XP_008196943.1:c.[3018A>T]","XP_970808.1:p.[Glu1006Asp]; XP_015838194.1:p.[Glu1006Asp]; XP_008196944.1:p.[Glu1006Asp]; XP_008196943.1:p.[Glu1006Asp]","LOC659406",659406,null,"659406 [Gene Symbol: LOC659406] [Locus Tag: TcasGA2_TC005555] [Chromosome: LG8] [Map Location: ] [Description: protein brunelleschi] [Gene Type: protein-coding]","LOC659406; TcasGA2_TC005555"]
[1206,"NC_007423.3",11398541,"SNV","C","T","Homozygous",20,20,100,1,15,8,0.35,38.35,23,23,7,14,null,1,1,"no","T/T","No",1,82.52,"XP_008196945.1:c.47C>T","XP_008196945.1:p.Ser16Leu","LOC103314014",103314014,null,"103314014 [Gene Symbol: LOC103314014] [Locus Tag: TcasGA2_TC006556] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314014; TcasGA2_TC006556"]
[1207,"NC_007423.3",11398543,"SNV","G","A","Homozygous",23,23,100,1,18,8,0.31,38.26,26,26,8,16,null,1,1,"no","A/A","No",1,91.52,"XP_008196945.1:c.49G>A","XP_008196945.1:p.Gly17Ser","LOC103314014",103314014,null,"103314014 [Gene Symbol: LOC103314014] [Locus Tag: TcasGA2_TC006556] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314014; TcasGA2_TC006556"]
[1208,"NC_007423.3",11403707,"SNV","G","C","Homozygous",26,26,100,1,13,16,0.45,37.92,29,29,11,14,null,1,1,"no","C/C","No",1,98.94,"XP_008196946.1:c.683C>G","XP_008196946.1:p.Ala228Gly","LOC660251, LOC659804","660251 , 659804",null,"660251 [Gene Symbol: LOC660251] [Locus Tag: TcasGA2_TC006562] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660251] [Gene Type: protein-coding] || 659804 [Gene Symbol: LOC659804] [Locus Tag: TcasGA2_TC005552] [Chromosome: LG8] [Map Location: ] [Description: WW domain-binding protein 2] [Gene Type: protein-coding]","LOC660251; TcasGA2_TC006562 || LOC659804; TcasGA2_TC005552"]
[1209,"NC_007423.3","11406227..11406228","MNV","CT","TC","Homozygous",23,23,100,1,13,12,0.48,37.48,25,25,12,14,null,1,1,"no","TC/TC","No",1,200,"XP_971233.1:c.1149_1150delAGinsGA","XP_971233.1:p.Gly384Ser","LOC660251, LOC659873","660251 , 659873",null,"660251 [Gene Symbol: LOC660251] [Locus Tag: TcasGA2_TC006562] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660251] [Gene Type: protein-coding] || 659873 [Gene Symbol: LOC659873] [Locus Tag: TcasGA2_TC005551] [Chromosome: LG8] [Map Location: ] [Description: cell cycle checkpoint protein RAD17] [Gene Type: protein-coding]","LOC660251; TcasGA2_TC006562 || TcasGA2_TC005551; LOC659873"]
[1210,"NC_007423.3",11439128,"SNV","A","G","Homozygous",31,31,100,1,18,15,0.45,36.29,33,33,11,17,null,1,1,"no","G/G","No",1,113.98,"XP_008196951.1:c.803A>G","XP_008196951.1:p.Asn268Ser","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1211,"NC_007423.3",11439182,"SNV","C","G","Heterozygous",16,32,50,1,16,0,0,37.75,16,32,6,10,0.15,0.18,0.04,"no","C/G","No",1,125.55,"XP_008196951.1:c.857C>G","XP_008196951.1:p.Ala286Gly","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1212,"NC_007423.3",11439189,"SNV","C","G","Heterozygous",17,35,48.57,1,17,0,0,37.88,17,35,7,10,1.24,0.13,0.03,"no","C/G","No",1,132.63,"XP_008196951.1:c.864C>G","XP_008196951.1:p.Asn288Lys","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1213,"NC_007423.3","11439210..11439211","MNV","GT","CC","Heterozygous",16,33,48.48,1,16,0,0,38.06,16,33,7,9,2.14,0.12,0.02,"no","complex","No",1,200,"XP_008196951.1:c.885_886delGTinsCC","XP_008196951.1:p.Tyr296His","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1214,"NC_007423.3",11439221,"SNV","A","T","Heterozygous",14,35,40,1,3,11,0.21,37.5,14,35,4,7,0,0.36,0.27,"no","A/T","No",1,98.53,"XP_008196951.1:c.896A>T","XP_008196951.1:p.Tyr299Phe","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1215,"NC_007423.3",11439274,"SNV","T","C","Heterozygous",8,31,25.81,1,3,6,0.33,39.62,9,35,4,4,2.3,0.19,0.99,"no","C/T","No",1,30.3,"XP_008196951.1:c.949T>C","XP_008196951.1:p.Tyr317His","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1216,"NC_007423.3",11439304,"SNV","G","A","Heterozygous",9,29,31.03,1,3,9,0.25,36,12,34,4,5,-1.86,0.2,0.99,"no","A/G","No",1,46.92,"XP_008196951.1:c.979G>A","XP_008196951.1:p.Ala327Thr","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1217,"NC_007423.3",11439352,"SNV","C","G","Homozygous",28,28,100,1,5,23,0.18,39.21,28,28,14,15,null,1,1,"no","G/G","No",1,104.96,"XP_008196951.1:c.1027C>G","XP_008196951.1:p.Gln343Glu","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1218,"NC_007423.3",11439373,"SNV","C","T","Heterozygous",22,31,70.97,1,4,18,0.18,39,22,32,9,11,2.42,0.3,0.85,"no","C/T","No",1,42.97,"XP_008196951.1:c.1048C>T","XP_008196951.1:p.His350Tyr","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1219,"NC_007423.3",11440045,"SNV","A","G","Heterozygous",4,20,20,0.91,0,4,0,38.5,4,20,1,1,0.14,0.01,0.69,"no","A/G","No",1,10.24,"XP_008196951.1:c.1720A>G","XP_008196951.1:p.Ile574Val","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1220,"NC_007423.3",11452317,"SNV","T","C","Homozygous",26,30,86.67,0.99,16,17,0.48,37.65,33,37,10,18,null,0.98,1,"no","C/C","No",1,19.6,"XP_971760.1:c.373T>C","XP_971760.1:p.Ser125Pro","LOC660436",660436,null,"660436 [Gene Symbol: LOC660436] [Locus Tag: TcasGA2_TC006566] [Chromosome: LG8] [Map Location: ] [Description: cytidine deaminase] [Gene Type: protein-coding]","LOC660436; TcasGA2_TC006566"]
[1221,"NC_007423.3",11492864,"SNV","C","A","Heterozygous",16,20,80,0.93,16,5,0.24,37,21,25,8,13,0,0.95,0.99,"no","A/C","No",1,11.82,"XP_008197015.2:c.704C>A","XP_008197015.2:p.Thr235Asn","LOC660950, LOC660896","660950 , 660896",null,"660950 [Gene Symbol: LOC660950] [Locus Tag: TcasGA2_TC006572] [Chromosome: LG8] [Map Location: ] [Description: pickpocket protein 28] [Gene Type: protein-coding] || 660896 [Gene Symbol: LOC660896] [Locus Tag: TcasGA2_TC006571] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: pickpocket protein 28] [Gene Type: protein-coding]","TcasGA2_TC006572; LOC660950 || LOC660896; TcasGA2_TC006571"]
[1222,"NC_007423.3",11499682,"SNV","G","A","Homozygous",21,21,100,1,4,17,0.19,38.57,21,21,8,12,null,1,1,"no","A/A","No",1,85.5,"XP_972237.1:c.751G>A","XP_972237.1:p.Val251Met","LOC660950",660950,null,"660950 [Gene Symbol: LOC660950] [Locus Tag: TcasGA2_TC006572] [Chromosome: LG8] [Map Location: ] [Description: pickpocket protein 28] [Gene Type: protein-coding]","TcasGA2_TC006572; LOC660950"]
[1223,"NC_007423.3",11600216,"SNV","A","G","Homozygous",20,20,100,1,14,9,0.39,39.05,23,23,8,11,null,1,1,"no","G/G","No",1,80.88,"XP_008196967.1:c.910A>G","XP_008196967.1:p.Thr304Ala","LOC661518",661518,null,"661518 [Gene Symbol: LOC661518] [Locus Tag: TcasGA2_TC006582] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized protein DDB_G0290685] [Gene Type: protein-coding]","TcasGA2_TC006582; LOC661518"]
[1224,"NC_007423.3","11605523..11605524","MNV","TG","CT","Homozygous",21,21,100,1,15,13,0.46,37.29,28,28,13,20,null,1,1,"no","CT/CT","No",1,200,"XP_972853.1:c.509_510delCAinsAG","XP_972853.1:p.Thr170Lys","LOC661609",661609,null,"661609 [Gene Symbol: LOC661609] [Locus Tag: TcasGA2_TC005538] [Chromosome: LG8] [Map Location: ] [Description: THO complex subunit 5 homolog] [Gene Type: protein-coding]","LOC661609; TcasGA2_TC005538"]
[1225,"NC_007423.3",11605537,"SNV","T","C","Homozygous",23,23,100,1,17,13,0.43,36.96,30,30,10,16,null,1,1,"no","C/C","No",1,89.91,"XP_972853.1:c.496A>G","XP_972853.1:p.Lys166Glu","LOC661609",661609,null,"661609 [Gene Symbol: LOC661609] [Locus Tag: TcasGA2_TC005538] [Chromosome: LG8] [Map Location: ] [Description: THO complex subunit 5 homolog] [Gene Type: protein-coding]","LOC661609; TcasGA2_TC005538"]
[1226,"NC_007423.3","11614538..11614540","Deletion","GCC","-","Homozygous",25,25,100,1,4,21,0.16,33.6,25,25,7,12,null,1,1,"no","-/-","No",1,200,"XP_008197021.1:c.102_104delGGC","XP_008197021.1:p.Ala38del","LOC661988, LOC103314039","661988 , 103314039",null,"661988 [Gene Symbol: LOC661988] [Locus Tag: TcasGA2_TC006585] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC661988] [Gene Type: protein-coding] || 103314039 [Gene Symbol: LOC103314039] [Locus Tag: TcasGA2_TC005536] [Chromosome: LG8] [Map Location: ] [Description: protein vav-1] [Gene Type: protein-coding]","TcasGA2_TC006585; LOC661988 || LOC103314039; TcasGA2_TC005536"]
[1227,"NC_007423.3",11724492,"SNV","G","A","Homozygous",20,20,100,1,18,2,0.1,37.25,20,20,6,16,null,1,1,"no","A/A","No",1,82.49,"XP_008196970.1:c.175G>A","XP_008196970.1:p.Ala59Thr","LOC103314027",103314027,null,"103314027 [Gene Symbol: LOC103314027] [Locus Tag: TcasGA2_TC006588] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006588; LOC103314027"]
[1228,"NC_007423.3",11724584,"SNV","G","A","Homozygous",23,23,100,1,4,19,0.17,37.83,23,23,7,12,null,1,1,"no","A/A","No",1,91.52,"XP_008196970.1:c.223G>A","XP_008196970.1:p.Asp75Asn","LOC103314027",103314027,null,"103314027 [Gene Symbol: LOC103314027] [Locus Tag: TcasGA2_TC006588] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006588; LOC103314027"]
[1229,"NC_007423.3",11733246,"SNV","T","C","Homozygous",20,20,100,1,12,14,0.46,37,26,26,13,12,null,1,1,"no","C/C","No",1,80.88,"XP_008196971.1:c.1969A>G","XP_008196971.1:p.Ile657Val","LOC662098",662098,null,"662098 [Gene Symbol: LOC662098] [Locus Tag: TcasGA2_TC005530] [Chromosome: LG8] [Map Location: ] [Description: ATPase family AAA domain-containing protein 5] [Gene Type: protein-coding]","TcasGA2_TC005530; LOC662098"]
[1230,"NC_007423.3","11764063..11764064","MNV","TT","CC","Homozygous",30,30,100,1,18,16,0.47,35.74,34,34,15,23,null,1,1,"no","CC/CC","No",1,200,"XP_008196973.1:c.29_30delTTinsCC","XP_008196973.1:p.Leu10Pro","LOC103314029",103314029,null,"103314029 [Gene Symbol: LOC103314029] [Locus Tag: TcasGA2_TC006598] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314029] [Gene Type: protein-coding]","TcasGA2_TC006598; LOC103314029"]
[1231,"NC_007423.3",11764078,"SNV","C","T","Homozygous",30,30,100,1,18,17,0.49,35.17,35,35,14,18,null,1,1,"no","T/T","No",1,112.62,"XP_008196973.1:c.44C>T","XP_008196973.1:p.Ala15Val","LOC103314029",103314029,null,"103314029 [Gene Symbol: LOC103314029] [Locus Tag: TcasGA2_TC006598] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314029] [Gene Type: protein-coding]","TcasGA2_TC006598; LOC103314029"]
[1232,"NC_007423.3",11939760,"SNV","C","T","Homozygous",20,21,95.24,1,12,16,0.43,36.75,28,29,7,11,null,1,1,"no","T/T","No",1,49.5,"XP_008197008.1:c.[99+4117C>T]; XP_015838328.1:c.[176-12020G>A]; XP_008197002.1:c.[245G>A]; XP_008197006.1:c.[32-12020G>A]; XP_008197004.1:c.[176-12020G>A]; XP_015838325.1:c.[99+4117C>T]; XP_974339.1:c.[245G>A]","XP_008197002.1:p.[Arg82Lys]; XP_974339.1:p.[Arg82Lys]","LOC103314036, LOC663161, LOC663188","103314036 , 663161 , 663188",null,"103314036 [Gene Symbol: LOC103314036] [Locus Tag: TcasGA2_TC006608] [Chromosome: LG8] [Map Location: ] [Description: G-protein coupled receptor 161] [Gene Type: protein-coding] || 663161 [Gene Symbol: LOC663161] [Locus Tag: TcasGA2_TC005507] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC663161] [Gene Type: protein-coding] || 663188 [Gene Symbol: LOC663188] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sialin-like] [Gene Type: protein-coding]","TcasGA2_TC006608; LOC103314036 || TcasGA2_TC005507; LOC663161 || LOC663188"]
[1233,"NC_007423.3",11939803,"SNV","T","G","Homozygous",21,21,100,1,5,21,0.19,37.29,26,26,6,7,null,1,1,"no","G/G","No",1,83.89,"XP_008197004.1:c.[176-12063A>C]; XP_008197002.1:c.[202A>C]; XP_015838328.1:c.[176-12063A>C]; XP_974339.1:c.[202A>C]; XP_008197006.1:c.[32-12063A>C]; XP_015838325.1:c.[99+4160T>G]; XP_008197008.1:c.[99+4160T>G]","XP_008197002.1:p.[Thr68Pro]; XP_974339.1:p.[Thr68Pro]","LOC103314036, LOC663161, LOC663188","103314036 , 663161 , 663188",null,"103314036 [Gene Symbol: LOC103314036] [Locus Tag: TcasGA2_TC006608] [Chromosome: LG8] [Map Location: ] [Description: G-protein coupled receptor 161] [Gene Type: protein-coding] || 663161 [Gene Symbol: LOC663161] [Locus Tag: TcasGA2_TC005507] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC663161] [Gene Type: protein-coding] || 663188 [Gene Symbol: LOC663188] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sialin-like] [Gene Type: protein-coding]","TcasGA2_TC006608; LOC103314036 || TcasGA2_TC005507; LOC663161 || LOC663188"]
[1234,"NC_007423.3",11972205,"SNV","G","T","Homozygous",21,26,80.77,0.84,3,18,0.14,36.48,21,26,8,3,0.49,0.37,0.57,"no","G/T","No",1,7.93,"XP_001814021.1:c.115G>T","XP_001814021.1:p.Gly39Trp","LOC100141739",100141739,null,"100141739 [Gene Symbol: LOC100141739] [Locus Tag: TcasGA2_TC006612] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141739] [Gene Type: protein-coding]","LOC100141739; TcasGA2_TC006612"]
[1235,"NC_007423.3",11972213,"SNV","C","A","Heterozygous",8,28,28.57,1,0,8,0,35,8,28,1,1,-2.44,0.02,0.21,"no","A/C","No",1,32.41,"XP_001814021.1:c.123C>A","XP_001814021.1:p.Ser41Arg","LOC100141739",100141739,null,"100141739 [Gene Symbol: LOC100141739] [Locus Tag: TcasGA2_TC006612] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141739] [Gene Type: protein-coding]","LOC100141739; TcasGA2_TC006612"]
[1236,"NC_007423.3",11987512,"SNV","A","G","Homozygous",27,27,100,1,20,8,0.29,36.74,28,28,10,14,null,1,1,"no","G/G","No",1,101.94,"XP_015838332.1:c.[64A>G]; XP_015838330.1:c.[153-132A>G]; XP_015838333.1:c.[267-132A>G]; XP_015838329.1:c.[228-132A>G]; XP_008197014.1:c.[267-132A>G]; XP_015838334.1:c.[142-1143A>G]; XP_015838336.1:c.[127-1143A>G]; XP_015838331.1:c.[147-132A>G]; XP_008197010.1:c.[267-132A>G]; XP_008197009.1:c.[267-132A>G]; XP_015838335.1:c.[142-1143A>G]","XP_015838332.1:p.Met22Val","LOC663340",663340,null,"663340 [Gene Symbol: LOC663340] [Locus Tag: TcasGA2_TC006614] [Chromosome: LG8] [Map Location: ] [Description: NAD kinase] [Gene Type: protein-coding]","LOC663340; TcasGA2_TC006614"]
[1237,"NC_007423.3",12092879,"SNV","G","C","Heterozygous",13,21,61.9,1,5,9,0.36,37.31,14,23,5,8,1.85,0.47,0.98,"no","C/G","No",1,56.89,"XP_015838352.1:c.[947C>G]; XP_015838358.1:c.[392-4728G>C]","XP_015838352.1:p.Thr316Ser","LOC103314078, LOC103314076, LOC655790","103314078 , 103314076 , 655790",null,"103314078 [Gene Symbol: LOC103314078] [Locus Tag: TcasGA2_TC006627] [Chromosome: LG8] [Map Location: ] [Description: replication factor C subunit 5] [Gene Type: protein-coding] || 103314076 [Gene Symbol: LOC103314076] [Locus Tag: TcasGA2_TC005500] [Chromosome: LG8] [Map Location: ] [Description: carboxypeptidase M] [Gene Type: protein-coding] || 655790 [Gene Symbol: LOC655790] [Locus Tag: TcasGA2_TC005499] [Chromosome: LG8] [Map Location: ] [Description: esterase B1] [Gene Type: protein-coding]","LOC103314078; TcasGA2_TC006627 || LOC103314076; TcasGA2_TC005500 || LOC655790; TcasGA2_TC005499"]
[1238,"NC_007423.3",12097657,"SNV","C","A","Heterozygous",9,24,37.5,1,9,0,0,38.22,9,25,1,9,-0.15,0.37,0.62,"no","A/C","No",1,56.28,"XP_008197182.1:c.[58C>A]; XP_015838358.1:c.[442C>A]; XP_015838359.1:c.[70C>A]","XP_008197182.1:p.[His20Asn]; XP_015838358.1:p.[His148Asn]; XP_015838359.1:p.[His24Asn]","LOC103314078",103314078,null,"103314078 [Gene Symbol: LOC103314078] [Locus Tag: TcasGA2_TC006627] [Chromosome: LG8] [Map Location: ] [Description: replication factor C subunit 5] [Gene Type: protein-coding]","LOC103314078; TcasGA2_TC006627"]
[1239,"NC_007423.3",12160181,"SNV","T","C","Homozygous",20,20,100,1,20,5,0.2,37.2,25,25,6,11,null,1,1,"no","C/C","No",1,80.88,"XP_008197196.2:c.811A>G","XP_008197196.2:p.Ser271Gly","LOC657120",657120,null,"657120 [Gene Symbol: LOC657120] [Locus Tag: TcasGA2_TC005490] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC657120; TcasGA2_TC005490"]
[1240,"NC_007423.3",12189280,"SNV","C","G","Heterozygous",15,24,62.5,1,12,13,0.48,35.6,25,34,8,6,-3.19,0.66,1,"no","C/G","No",1,61.57,"XP_015838438.1:c.[459G>C]; XP_015838437.1:c.[459G>C]","XP_015838438.1:p.[Leu153Phe]; XP_015838437.1:p.[Leu153Phe]","LOC657512",657512,null,"657512 [Gene Symbol: LOC657512] [Locus Tag: TcasGA2_TC005487] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter] [Gene Type: protein-coding]","TcasGA2_TC005487; LOC657512"]
[1241,"NC_007423.3","12201161..12201162","MNV","GG","AA","Heterozygous",10,24,41.67,1,7,3,0.3,35,10,24,3,7,-3.09,0.26,0.59,"no","complex","No",1,200,"XP_008197203.1:c.[302_303delGGinsAA]; XP_969207.1:c.[302_303delGGinsAA]","XP_008197203.1:p.[Gly101Glu]; XP_969207.1:p.[Gly101Glu]","LOC657667",657667,null,"657667 [Gene Symbol: LOC657667] [Locus Tag: TcasGA2_TC034145] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter-like] [Gene Type: protein-coding]","LOC657667; TcasGA2_TC034145"]
[1242,"NC_007423.3",12209857,"SNV","G","A","Heterozygous",10,22,45.45,1,6,4,0.4,38.6,10,23,2,6,2.11,0.23,0.4,"no","A/G","No",1,79.12,"XP_969352.1:c.287C>T","XP_969352.1:p.Ala96Val","LOC657824",657824,null,"657824 [Gene Symbol: LOC657824] [Locus Tag: TcasGA2_TC005486] [Chromosome: LG8] [Map Location: ] [Description: 39S ribosomal protein L12, mitochondrial] [Gene Type: protein-coding]","LOC657824; TcasGA2_TC005486"]
[1243,"NC_007423.3",12239914,"SNV","G","A","Heterozygous",16,23,69.57,1,11,5,0.31,38.56,16,23,6,13,0.67,0.89,0.91,"no","A/G","No",1,39.74,"XP_008197208.1:c.266C>T","XP_008197208.1:p.Thr89Ile","LOC103314086",103314086,null,"103314086 [Gene Symbol: LOC103314086] [Locus Tag: TcasGA2_TC005483] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314086] [Gene Type: protein-coding]","LOC103314086; TcasGA2_TC005483"]
[1244,"NC_007423.3",12239917,"SNV","A","G","Homozygous",20,20,100,1,15,5,0.25,38.75,20,20,8,14,null,1,1,"no","G/G","No",1,80.88,"XP_008197208.1:c.263T>C","XP_008197208.1:p.Leu88Pro","LOC103314086",103314086,null,"103314086 [Gene Symbol: LOC103314086] [Locus Tag: TcasGA2_TC005483] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314086] [Gene Type: protein-coding]","LOC103314086; TcasGA2_TC005483"]
[1245,"NC_007423.3",12462105,"SNV","C","T","Homozygous",20,21,95.24,1,18,6,0.25,36.85,24,25,9,9,null,0.97,1,"no","T/T","No",1,52.13,"XP_015838317.1:c.119C>T","XP_015838317.1:p.Ala40Val","LOC107398521",107398521,null,"107398521 [Gene Symbol: LOC107398521] [Locus Tag: TcasGA2_TC006646] [Chromosome: LG8] [Map Location: ] [Description: cuticle protein 18.7-like] [Gene Type: protein-coding]","LOC107398521; TcasGA2_TC006646"]
[1246,"NC_007423.3",12506571,"SNV","G","A","Homozygous",18,21,85.71,0.79,11,7,0.39,37.78,18,23,7,11,null,0.82,1,"no","A/A","No",1,6.79,"XP_970539.1:c.[265-2253C>T]; XP_015838388.1:c.[244G>A]; XP_008197237.1:c.[265-2253C>T]","XP_015838388.1:p.Val82Ile","LOC659114, LOC107398541","659114 , 107398541",null,"659114 [Gene Symbol: LOC659114] [Locus Tag: TcasGA2_TC005477] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase unc-51] [Gene Type: protein-coding] || 107398541 [Gene Symbol: LOC107398541] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398541] [Gene Type: protein-coding]","LOC659114; TcasGA2_TC005477 || LOC107398541"]
[1247,"NC_007423.3",12668433,"SNV","T","A","Heterozygous",13,21,61.9,1,9,4,0.31,39.77,13,21,3,10,null,0.05,0.98,"no","A/C","No",1,59.87,"XP_971761.1:c.249A>T","XP_971761.1:p.Glu83Asp","LOC660437",660437,null,"660437 [Gene Symbol: LOC660437] [Locus Tag: TcasGA2_TC005468] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660437] [Gene Type: protein-coding]","LOC660437; TcasGA2_TC005468"]
[1248,"NC_007423.3",12682359,"SNV","A","C","Homozygous",26,26,100,1,18,17,0.49,36.54,35,35,9,20,null,1,1,"no","C/C","No",1,98.94,"XP_971928.3:c.[888+2052T>G]; XP_976350.1:c.[817A>C]","XP_976350.1:p.Thr273Pro","LOC660619, LOC660559","660619 , 660559",null,"660619 [Gene Symbol: LOC660619] [Locus Tag: TcasGA2_TC005465] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase S6KL] [Gene Type: protein-coding] || 660559 [Gene Symbol: LOC660559] [Locus Tag: TcasGA2_TC006664] [Chromosome: LG8] [Map Location: ] [Description: pollen-specific leucine-rich repeat extensin-like protein 1] [Gene Type: protein-coding]","TcasGA2_TC005465; LOC660619 || LOC660559; TcasGA2_TC006664"]
[1249,"NC_007423.3",12690339,"SNV","T","C","Homozygous",20,20,100,1,13,10,0.43,39.1,23,23,10,12,null,1,1,"no","C/C","No",1,80.88,"XP_971928.3:c.74A>G","XP_971928.3:p.Glu25Gly","LOC660619",660619,null,"660619 [Gene Symbol: LOC660619] [Locus Tag: TcasGA2_TC005465] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase S6KL] [Gene Type: protein-coding]","TcasGA2_TC005465; LOC660619"]
[1250,"NC_007423.3",12712759,"SNV","C","T","Homozygous",25,26,96.15,1,9,17,0.35,36.12,26,27,8,14,null,1,1,"no","T/T","No",1,68.84,"XP_972187.1:c.632C>T","XP_972187.1:p.Ala211Val","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1251,"NC_007423.3",12712774,"SNV","G","C","Homozygous",26,27,96.3,1,9,21,0.3,36.12,30,31,9,14,null,1,1,"no","C/C","No",1,67.7,"XP_972187.1:c.647G>C","XP_972187.1:p.Ser216Thr","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1252,"NC_007423.3",12712795,"SNV","C","T","Homozygous",25,26,96.15,1,4,23,0.15,38.2,27,28,8,8,null,1,1,"no","T/T","No",1,68.4,"XP_972187.1:c.668C>T","XP_972187.1:p.Ala223Val","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1253,"NC_007423.3",12712804,"SNV","G","C","Homozygous",24,25,96,1,6,21,0.22,37.67,27,28,9,10,null,1,1,"no","C/C","No",1,63.5,"XP_972187.1:c.677G>C","XP_972187.1:p.Ser226Thr","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1254,"NC_007423.3",12712821,"SNV","A","T","Homozygous",29,30,96.67,1,11,21,0.34,36.59,32,33,10,14,null,1,1,"no","T/T","No",1,79.35,"XP_972187.1:c.694A>T","XP_972187.1:p.Ser232Cys","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1255,"NC_007423.3",12712827,"SNV","A","G","Homozygous",21,21,100,1,11,13,0.46,38.1,24,24,8,12,null,1,1,"no","G/G","No",1,83.89,"XP_972187.1:c.700A>G","XP_972187.1:p.Met234Val","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1256,"NC_007423.3",12716984,"SNV","T","A","Homozygous",30,30,100,1,25,10,0.29,35.37,35,35,16,21,null,1,1,"no","A/A","No",1,112.58,"XP_972238.1:c.601T>A","XP_972238.1:p.Cys201Ser","LOC660951",660951,null,"660951 [Gene Symbol: LOC660951] [Locus Tag: TcasGA2_TC006668] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006668; LOC660951"]
[1257,"NC_007423.3",12723458,"SNV","C","T","Heterozygous",14,20,70,1,11,6,0.35,35.14,17,24,4,8,-3.3,0.8,1,"no","C/T","No",1,35.39,"XP_008197320.1:c.695C>T","XP_008197320.1:p.Ala232Val","LOC103314107",103314107,null,"103314107 [Gene Symbol: LOC103314107] [Locus Tag: TcasGA2_TC006670] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006670; LOC103314107"]
[1258,"NC_007423.3",12749854,"SNV","G","T","Heterozygous",5,20,25,0.98,0,5,0,39.4,5,23,2,3,2.01,0.1,0.25,"no","G/T","No",1,16.3,"XP_008197252.1:c.[1074C>A]; XP_015838349.1:c.[1074C>A]; XP_015838347.1:c.[1074C>A]; XP_015838348.1:c.[1071C>A]","XP_008197252.1:p.[Ser358Arg]; XP_015838349.1:p.[Ser358Arg]; XP_015838347.1:p.[Ser358Arg]; XP_015838348.1:p.[Ser357Arg]","LOC103314096",103314096,null,"103314096 [Gene Symbol: LOC103314096] [Locus Tag: TcasGA2_TC030652] [Chromosome: LG8] [Map Location: ] [Description: tubulin polyglutamylase TTLL4] [Gene Type: protein-coding]","LOC103314096; TcasGA2_TC030652"]
[1259,"NC_007423.3",12785539,"SNV","C","G","Homozygous",21,21,100,1,10,14,0.42,39.38,24,24,8,12,null,1,1,"no","G/G","No",1,83.89,"XP_015838367.1:c.[2640G>C]; XP_015838370.1:c.[2637G>C]; XP_008197261.1:c.[2616G>C]; XP_015838369.1:c.[2640G>C]; XP_015838372.1:c.[2586G>C]; XP_015838371.1:c.[2589G>C]; XP_015838373.1:c.[2640G>C]","XP_015838367.1:p.[Lys880Asn]; XP_015838370.1:p.[Lys879Asn]; XP_008197261.1:p.[Lys872Asn]; XP_015838369.1:p.[Lys880Asn]; XP_015838372.1:p.[Lys862Asn]; XP_015838371.1:p.[Lys863Asn]; XP_015838373.1:p.[Lys880Asn]","LOC661858",661858,null,"661858 [Gene Symbol: LOC661858] [Locus Tag: TcasGA2_TC005459] [Chromosome: LG8] [Map Location: ] [Description: prominin-like protein] [Gene Type: protein-coding]","LOC661858; TcasGA2_TC005459"]
[1260,"NC_007423.3",12811930,"SNV","C","T","Homozygous",21,21,100,1,13,10,0.43,36.86,23,23,12,12,null,1,1,"no","T/T","No",1,85.53,"XP_973168.1:c.1348G>A","XP_973168.1:p.Ala450Thr","LOC661945",661945,null,"661945 [Gene Symbol: LOC661945] [Locus Tag: TcasGA2_TC005457] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC661945] [Gene Type: protein-coding]","TcasGA2_TC005457; LOC661945"]
[1261,"NC_007423.3",12848194,"SNV","T","C","Homozygous",24,24,100,1,12,17,0.41,37.42,29,29,6,11,null,1,1,"no","C/C","No",1,92.92,"XP_015838318.1:c.4723T>C","XP_015838318.1:p.Tyr1575His","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1262,"NC_007423.3",12906647,"SNV","C","G","Homozygous",30,30,100,1,5,25,0.17,39.4,30,30,6,9,null,1,1,"no","G/G","No",1,110.97,"XP_008197272.1:c.4500G>C","XP_008197272.1:p.Glu1500Asp","LOC662491",662491,null,"662491 [Gene Symbol: LOC662491] [Locus Tag: TcasGA2_TC005448] [Chromosome: LG8] [Map Location: ] [Description: mediator of RNA polymerase II transcription subunit 13] [Gene Type: protein-coding]","LOC662491; TcasGA2_TC005448"]
[1263,"NC_007423.3",13077160,"SNV","T","C","Homozygous",20,20,100,1,12,13,0.48,36.85,25,25,7,11,null,1,1,"no","C/C","No",1,80.88,"XP_008197282.1:c.[946T>C]; XP_008197281.1:c.[990T>C]; XP_974056.2:c.[990T>C]","XP_008197282.1:p.[Ser316Pro]","LOC662889",662889,null,"662889 [Gene Symbol: LOC662889] [Locus Tag: TcasGA2_TC006701] [Chromosome: LG8] [Map Location: ] [Description: ubiquitin carboxyl-terminal hydrolase nonstop] [Gene Type: protein-coding]","TcasGA2_TC006701; LOC662889"]
[1264,"NC_007423.3",13099554,"SNV","C","T","Heterozygous",13,21,61.9,1,6,9,0.4,40.15,15,26,5,7,1.45,0.74,0.99,"no","C/T","No",1,58.15,"NP_001161783.1:c.986G>A","NP_001161783.1:p.Gly329Glu","Y-1",662975,"yellow-1","662975 [Gene Symbol: Y-1] [Locus Tag: TcasGA2_TC005444] [Chromosome: LG8] [Map Location: ] [Description: yellow-1] [Gene Type: protein-coding]","TcasGA2_TC005444; Y-1"]
[1265,"NC_007423.3",13160474,"SNV","T","A","Homozygous",21,21,100,1,8,18,0.31,38.76,26,26,9,11,null,1,1,"no","A/A","No",1,85.5,"XP_974340.1:c.721A>T","XP_974340.1:p.Thr241Ser","LOC663189",663189,null,"663189 [Gene Symbol: LOC663189] [Locus Tag: TcasGA2_TC005440] [Chromosome: LG8] [Map Location: ] [Description: putative inorganic phosphate cotransporter] [Gene Type: protein-coding]","LOC663189; TcasGA2_TC005440"]
[1266,"NC_007423.3",13197784,"SNV","T","G","Homozygous",27,27,100,1,6,21,0.22,39.07,27,27,8,13,null,1,1,"no","G/G","No",1,101.95,"XP_008197350.1:c.[502A>C]; XP_015838535.1:c.[502A>C]; XP_001809245.1:c.[494+102A>C]","XP_008197350.1:p.[Lys168Gln]; XP_015838535.1:p.[Lys168Gln]","LOC100141967",100141967,null,"100141967 [Gene Symbol: LOC100141967] [Locus Tag: TcasGA2_TC005433] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141967] [Gene Type: protein-coding]","LOC100141967; TcasGA2_TC005433"]
[1267,"NC_007423.3",13220067,"SNV","C","G","Heterozygous",9,24,37.5,1,9,8,0.47,35,17,34,2,2,-2.41,0.04,0.99,"no","C/G","No",1,61.34,"XP_015838505.1:c.[698G>C]; XP_015838508.1:c.[13-3870C>G]","XP_015838505.1:p.Ser233Thr","LOC655221, LOC655077","655221 , 655077",null,"655221 [Gene Symbol: LOC655221] [Locus Tag: TcasGA2_TC006713] [Chromosome: LG8] [Map Location: ] [Description: protein yippee-like 2] [Gene Type: protein-coding] || 655077 [Gene Symbol: LOC655077] [Locus Tag: TcasGA2_TC005432] [Chromosome: LG8] [Map Location: ] [Description: cathepsin B precursor] [Gene Type: protein-coding]","LOC655221; TcasGA2_TC006713 || LOC655077; TcasGA2_TC005432"]
[1268,"NC_007423.3",13220118,"SNV","C","T","Heterozygous",8,20,40,1,4,5,0.44,36.12,9,23,4,7,-1.77,0.59,0.73,"no","C/T","No",1,59.31,"XP_015838505.1:c.[647G>A]; XP_015838508.1:c.[13-3819C>T]","XP_015838505.1:p.Ser216Asn","LOC655221, LOC655077","655221 , 655077",null,"655221 [Gene Symbol: LOC655221] [Locus Tag: TcasGA2_TC006713] [Chromosome: LG8] [Map Location: ] [Description: protein yippee-like 2] [Gene Type: protein-coding] || 655077 [Gene Symbol: LOC655077] [Locus Tag: TcasGA2_TC005432] [Chromosome: LG8] [Map Location: ] [Description: cathepsin B precursor] [Gene Type: protein-coding]","LOC655221; TcasGA2_TC006713 || LOC655077; TcasGA2_TC005432"]
[1269,"NC_007423.3",13220133,"SNV","C","A","Heterozygous",7,20,35,1,2,6,0.25,38.86,8,23,4,5,-0.99,0.23,1,"no","A/C","No",1,41.87,"XP_015838508.1:c.[13-3804C>A]; XP_015838505.1:c.[632G>T]","XP_015838505.1:p.Arg211Leu","LOC655221, LOC655077","655221 , 655077",null,"655221 [Gene Symbol: LOC655221] [Locus Tag: TcasGA2_TC006713] [Chromosome: LG8] [Map Location: ] [Description: protein yippee-like 2] [Gene Type: protein-coding] || 655077 [Gene Symbol: LOC655077] [Locus Tag: TcasGA2_TC005432] [Chromosome: LG8] [Map Location: ] [Description: cathepsin B precursor] [Gene Type: protein-coding]","LOC655221; TcasGA2_TC006713 || LOC655077; TcasGA2_TC005432"]
[1270,"NC_007423.3",13350729,"SNV","G","A","Heterozygous",14,26,53.85,1,10,4,0.29,37.71,14,26,7,10,-0.51,0.11,0.85,"no","A/G","No",1,95.23,"XP_015838445.1:c.2711G>A","XP_015838445.1:p.Arg904Gln","LOC656371",656371,null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721"]
[1271,"NC_007423.3",13426877,"SNV","A","G","Heterozygous",11,26,42.31,1,6,7,0.46,37.45,13,28,4,8,-2.54,0.82,1,"no","A/G","No",1,82.48,"XP_015838512.1:c.5609A>G","XP_015838512.1:p.Asn1870Ser","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1272,"NC_007423.3",13430358,"SNV","A","T","Heterozygous",16,25,64,1,6,14,0.3,36,20,32,7,8,-1.9,0.89,1,"no","A/T","No",1,58.16,"XP_015838512.1:c.8882A>T","XP_015838512.1:p.Glu2961Val","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1273,"NC_007423.3",13430940,"SNV","G","C","Homozygous",26,26,100,1,16,20,0.44,38,36,36,9,14,null,1,1,"no","C/C","No",1,98.94,"XP_015838512.1:c.9464G>C","XP_015838512.1:p.Ser3155Thr","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1274,"NC_007423.3",13430946,"SNV","A","G","Homozygous",26,26,100,1,15,20,0.43,37.08,35,35,9,14,null,1,1,"no","G/G","No",1,98.93,"XP_015838512.1:c.9470A>G","XP_015838512.1:p.Gln3157Arg","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1275,"NC_007423.3",13431636,"SNV","A","G","Homozygous",22,22,100,1,13,13,0.5,38.45,26,26,12,10,null,1,1,"no","G/G","No",1,86.89,"XP_015838512.1:c.10160A>G","XP_015838512.1:p.Gln3387Arg","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1276,"NC_007423.3",13433916,"SNV","T","C","Homozygous",29,29,100,1,10,22,0.31,37.41,32,32,14,17,null,1,1,"no","C/C","No",1,107.97,"XP_015838512.1:c.12440T>C","XP_015838512.1:p.Leu4147Pro","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1277,"NC_007423.3",13433987,"SNV","G","A","Heterozygous",14,22,63.64,1,10,8,0.44,35.93,18,26,5,10,-2.05,0.74,1,"no","A/G","No",1,55.31,"XP_015838512.1:c.12511G>A","XP_015838512.1:p.Asp4171Asn","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1278,"NC_007423.3",13436043,"SNV","A","G","Heterozygous",13,21,61.9,1,10,12,0.45,37.46,22,30,8,10,-0.07,0.47,1,"no","A/G","No",1,56.53,"XP_015838512.1:c.14468A>G","XP_015838512.1:p.His4823Arg","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1279,"NC_007423.3",13441001,"SNV","G","C","Heterozygous",10,21,47.62,1,4,6,0.4,36.1,10,21,5,5,-1.34,0.34,0.59,"no","C/G","No",1,82.47,"XP_968623.1:c.746C>G","XP_968623.1:p.Thr249Ser","LOC657042",657042,null,"657042 [Gene Symbol: LOC657042] [Locus Tag: TcasGA2_TC005421] [Chromosome: LG8] [Map Location: ] [Description: nucleolar complex protein 2 homolog] [Gene Type: protein-coding]","LOC657042; TcasGA2_TC005421"]
[1280,"NC_007423.3",13444131,"SNV","A","G","Homozygous",31,32,96.88,1,15,30,0.33,37.9,45,46,8,11,null,0.96,1,"no","G/G","No",1,86.99,"XP_968692.2:c.[1616A>G]; XP_008197361.1:c.[1535A>G]","XP_968692.2:p.[Asn539Ser]; XP_008197361.1:p.[Asn512Ser]","LOC657121",657121,null,"657121 [Gene Symbol: LOC657121] [Locus Tag: TcasGA2_TC006728] [Chromosome: LG8] [Map Location: ] [Description: ribonuclease Z, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC006728; LOC657121"]
[1281,"NC_007423.3",13502863,"SNV","G","A","Heterozygous",6,20,30,1,5,3,0.38,38.5,8,26,3,3,1.11,0.22,0.93,"no","A/G","No",1,33.8,"XP_008197517.1:c.943G>A","XP_008197517.1:p.Glu315Lys","LOC657358, LOC657513","657358 , 657513",null,"657358 [Gene Symbol: LOC657358] [Locus Tag: TcasGA2_TC005418] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657358] [Gene Type: protein-coding] || 657513 [Gene Symbol: LOC657513] [Locus Tag: TcasGA2_TC006733] [Chromosome: LG8] [Map Location: ] [Description: cholinesterase 1] [Gene Type: protein-coding]","LOC657358; TcasGA2_TC005418 || TcasGA2_TC006733; LOC657513"]
[1282,"NC_007423.3",13513177,"SNV","A","C","Heterozygous",5,20,25,1,5,0,0,40.8,5,21,2,4,1.4,0.26,0.48,"no","A/C","No",1,24.32,"XP_008197365.1:c.100T>G","XP_008197365.1:p.Leu34Val","LOC103312110",103312110,null,"103312110 [Gene Symbol: LOC103312110] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: beta-glucuronidase-like] [Gene Type: protein-coding]","LOC103312110"]
[1283,"NC_007423.3",13513240,"SNV","A","G","Heterozygous",5,22,22.73,0.98,4,1,0.2,37.4,5,27,3,4,-0.9,0.63,0.99,"no","A/G","No",1,17.06,"XP_008197365.1:c.37T>C","XP_008197365.1:p.Phe13Leu","LOC103312110",103312110,null,"103312110 [Gene Symbol: LOC103312110] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: beta-glucuronidase-like] [Gene Type: protein-coding]","LOC103312110"]
[1284,"NC_007423.3","13513264..13513265","MNV","TC","CT","Heterozygous",20,25,80,1,7,14,0.33,36.67,21,26,9,11,1.49,0.91,1,"no","complex","No",1,200,"XP_008197365.1:c.12_13delGAinsAG","XP_008197365.1:p.Thr5Ala","LOC103312110",103312110,null,"103312110 [Gene Symbol: LOC103312110] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: beta-glucuronidase-like] [Gene Type: protein-coding]","LOC103312110"]
[1285,"NC_007423.3",13513272,"SNV","T","C","Heterozygous",17,22,77.27,0.97,5,13,0.28,36.76,18,23,7,8,1.41,0.88,1,"no","C/T","No",1,15.56,"XP_008197365.1:c.5A>G","XP_008197365.1:p.Lys2Arg","LOC103312110",103312110,null,"103312110 [Gene Symbol: LOC103312110] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: beta-glucuronidase-like] [Gene Type: protein-coding]","LOC103312110"]
[1286,"NC_007423.3",13675786,"SNV","A","C","Heterozygous",16,23,69.57,1,13,3,0.19,36.69,16,25,7,12,-1.17,0.43,0.66,"no","A/C","No",1,33.52,"XP_008197373.1:c.1107A>C","XP_008197373.1:p.Gln369His","LOC658818",658818,null,"658818 [Gene Symbol: LOC658818] [Locus Tag: TcasGA2_TC006743] [Chromosome: LG8] [Map Location: ] [Description: robo3] [Gene Type: protein-coding]","LOC658818; robo3; TcasGA2_TC006743"]
[1287,"NC_007423.3",13684246,"SNV","G","A","Homozygous",24,24,100,1,24,0,0,38.21,24,24,6,16,null,1,1,"no","A/A","No",1,94.52,"XP_970464.1:c.515C>T","XP_970464.1:p.Ala172Val","LOC659115, LOC659032","659115 , 659032",null,"659115 [Gene Symbol: LOC659115] [Locus Tag: TcasGA2_TC006745] [Chromosome: LG8] [Map Location: ] [Description: charged multivesicular body protein 6-B] [Gene Type: protein-coding] || 659032 [Gene Symbol: LOC659032] [Locus Tag: TcasGA2_TC005405] [Chromosome: LG8] [Map Location: ] [Description: exosome complex component RRP40] [Gene Type: protein-coding]","TcasGA2_TC006745; LOC659115 || LOC659032; TcasGA2_TC005405"]
[1288,"NC_007423.3",13760150,"SNV","G","A","Homozygous",19,22,86.36,0.88,17,3,0.15,37.53,20,23,7,12,null,0.83,1,"no","A/A","No",1,9.12,"XP_001812287.1:c.[2545G>A]; XP_008197385.1:c.[2473G>A]","XP_001812287.1:p.[Val849Ile]; XP_008197385.1:p.[Val825Ile]","LOC659874",659874,null,"659874 [Gene Symbol: LOC659874] [Locus Tag: TcasGA2_TC006753] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC659874] [Gene Type: protein-coding]","LOC659874; TcasGA2_TC006753"]
[1289,"NC_007423.3",13762610,"SNV","C","T","Heterozygous",14,20,70,1,3,11,0.21,36.36,14,22,5,7,-1.4,0.78,0.79,"no","C/T","No",1,35.39,"XP_001812287.1:c.[3157C>T]; XP_008197385.1:c.[3085C>T]","XP_001812287.1:p.[Pro1053Ser]; XP_008197385.1:p.[Pro1029Ser]","LOC659874",659874,null,"659874 [Gene Symbol: LOC659874] [Locus Tag: TcasGA2_TC006753] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC659874] [Gene Type: protein-coding]","LOC659874; TcasGA2_TC006753"]
[1290,"NC_007423.3",13782168,"SNV","C","G","Homozygous",24,27,88.89,1,16,15,0.48,38.71,31,34,8,18,null,0.7,1,"no","G/G","No",1,23.48,"XP_008197389.1:c.[3705C>G]; XP_008197390.1:c.[3529+291C>G]","XP_008197389.1:p.Asp1235Glu","LOC660002",660002,null,"660002 [Gene Symbol: LOC660002] [Locus Tag: TcasGA2_TC006755] [Chromosome: LG8] [Map Location: ] [Description: tuberin] [Gene Type: protein-coding]","TSC2; LOC660002; TcasGA2_TC006755"]
[1291,"NC_007423.3",13783101,"SNV","C","T","Heterozygous",9,21,42.86,1,5,7,0.42,36.44,12,24,3,5,1.21,0.29,1,"no","C/T","No",1,69.29,"XP_008197389.1:c.[4151C>T]; XP_008197390.1:c.[3596C>T]","XP_008197389.1:p.[Pro1384Leu]; XP_008197390.1:p.[Pro1199Leu]","LOC660002",660002,null,"660002 [Gene Symbol: LOC660002] [Locus Tag: TcasGA2_TC006755] [Chromosome: LG8] [Map Location: ] [Description: tuberin] [Gene Type: protein-coding]","TSC2; LOC660002; TcasGA2_TC006755"]
[1292,"NC_007423.3",13806560,"SNV","C","T","Heterozygous",14,20,70,1,3,12,0.2,34.57,15,21,4,4,-3.46,0.32,0.94,"no","C/T","No",1,35.39,"XP_015838457.1:c.1360G>A","XP_015838457.1:p.Val454Met","LOC660438",660438,null,"660438 [Gene Symbol: LOC660438] [Locus Tag: TcasGA2_TC005396] [Chromosome: LG8] [Map Location: ] [Description: dynein assembly factor 5, axonemal] [Gene Type: protein-coding]","TcasGA2_TC005396; LOC660438"]
[1293,"NC_007423.3",13830153,"SNV","G","T","Heterozygous",7,23,30.43,1,7,0,0,37.43,7,28,1,5,1.37,{"v":7.26E-3,"d":"7.26E-03"},0.05,"no","G/T","No",1,33.37,"XP_008197407.1:c.[1783C>A]; XP_008197404.1:c.[1789C>A]","XP_008197407.1:p.[Leu595Met]; XP_008197404.1:p.[Leu597Met]","LOC661007",661007,null,"661007 [Gene Symbol: LOC661007] [Locus Tag: TcasGA2_TC005388] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter] [Gene Type: protein-coding]","TcasGA2_TC005388; LOC661007"]
[1294,"NC_007423.3","13841275..13841276","MNV","CA","TG","Homozygous",23,23,100,1,19,11,0.37,37.41,30,30,11,21,null,1,1,"no","TG/TG","No",1,200,"XP_008197521.1:c.603_604delCAinsTG","XP_008197521.1:p.Ile202Val","LOC103314156",103314156,null,"103314156 [Gene Symbol: LOC103314156] [Locus Tag: TcasGA2_TC006762] [Chromosome: LG8] [Map Location: ] [Description: leucine-rich repeat-containing protein 15] [Gene Type: protein-coding]","TcasGA2_TC006762; LOC103314156"]
[1295,"NC_007423.3",13954813,"SNV","T","C","Homozygous",20,20,100,1,1,20,0.05,37.55,21,21,7,9,null,1,1,"no","C/C","No",1,80.88,"NP_001164202.1:c.830A>G","NP_001164202.1:p.Asn277Ser","HEX3",661859,"hexamerin 3","661859 [Gene Symbol: HEX3] [Locus Tag: TcasGA2_TC005374] [Chromosome: LG8] [Map Location: ] [Description: hexamerin 3] [Gene Type: protein-coding]","TcasGA2_TC005374; HEX3"]
[1296,"NC_007423.3",14011139,"SNV","G","A","Homozygous",20,20,100,1,12,11,0.48,35.05,23,23,9,12,null,1,1,"no","A/A","No",1,79.49,"XP_008197428.1:c.[214C>T]; XP_015838510.1:c.[214C>T]; XP_973379.2:c.[214C>T]","XP_008197428.1:p.[His72Tyr]; XP_015838510.1:p.[His72Tyr]; XP_973379.2:p.[His72Tyr]","LOC662169",662169,null,"662169 [Gene Symbol: LOC662169] [Locus Tag: TcasGA2_TC005369] [Chromosome: LG8] [Map Location: ] [Description: cyclin-dependent kinase-like 4] [Gene Type: protein-coding]","TcasGA2_TC005369; LOC662169"]
[1297,"NC_007423.3",14316540,"SNV","C","A","Heterozygous",9,24,37.5,1,9,0,0,40.11,9,29,2,6,2.03,0.06,0.35,"no","A/C","No",1,56.26,"XP_974237.2:c.[204G>T]; XP_008197456.1:c.[180G>T]; XP_008197454.1:c.[204G>T]; XP_008197455.1:c.[204G>T]; XP_008197457.1:c.[66G>T]; XP_015838468.1:c.[147G>T]; XP_008197458.1:c.[66G>T]","XP_974237.2:p.[Gln68His]; XP_008197456.1:p.[Gln60His]; XP_008197454.1:p.[Gln68His]; XP_008197455.1:p.[Gln68His]; XP_008197457.1:p.[Gln22His]; XP_015838468.1:p.[Gln49His]; XP_008197458.1:p.[Gln22His]","LOC663083",663083,null,"663083 [Gene Symbol: LOC663083] [Locus Tag: TcasGA2_TC005341] [Chromosome: LG8] [Map Location: ] [Description: protein alan shepard] [Gene Type: protein-coding]","TcasGA2_TC005341; LOC663083"]
[1298,"NC_007424.3",183597,"SNV","C","A","Homozygous",27,27,100,1,18,14,0.44,38.59,32,32,13,15,null,1,1,"no","A/A","No",1,103.55,"XP_008191527.1:c.6605G>T","XP_008191527.1:p.Cys2202Phe","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1299,"NC_007424.3",186171,"SNV","C","T","Homozygous",27,27,100,1,10,23,0.3,36.48,33,33,14,15,null,1,1,"no","T/T","No",1,103.58,"XP_008191527.1:c.6157G>A","XP_008191527.1:p.Val2053Ile","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1300,"NC_007424.3",186182,"SNV","G","A","Homozygous",24,24,100,1,11,19,0.37,37.46,30,30,11,15,null,1,1,"no","A/A","No",1,94.52,"XP_008191527.1:c.6146C>T","XP_008191527.1:p.Thr2049Ile","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1301,"NC_007424.3","194858..194859","MNV","TG","CC","Homozygous",21,23,91.3,1,4,17,0.19,39.88,21,23,5,11,null,0.9,0.95,"no","CC/CC","No",1,200,"XP_008191527.1:c.183_184delCAinsGG","XP_008191527.1:p.Ile62Val","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1302,"NC_007424.3",197162,"SNV","C","A","Heterozygous",6,23,26.09,0.99,6,0,0,35.67,6,25,1,6,-1.02,0.04,0.3,"no","A/C","No",1,20.82,"XP_008191543.1:c.[881C>A]; XP_968467.1:c.[965C>A]","XP_008191543.1:p.[Ser294Tyr]; XP_968467.1:p.[Ser322Tyr]","LOC656874",656874,null,"656874 [Gene Symbol: LOC656874] [Locus Tag: TcasGA2_TC012248] [Chromosome: LG9] [Map Location: ] [Description: hexosaminidase D] [Gene Type: protein-coding]","TcasGA2_TC012248; LOC656874"]
[1303,"NC_007424.3",1404637,"SNV","A","G","Homozygous",21,21,100,1,11,12,0.48,37.05,23,23,8,13,null,1,1,"no","G/G","No",1,83.89,"XP_015838591.1:c.124A>G","XP_015838591.1:p.Ile42Val","LOC655964",655964,null,"655964 [Gene Symbol: LOC655964] [Locus Tag: TcasGA2_TC001942] [Chromosome: LG9] [Map Location: ] [Description: dynactin subunit 2] [Gene Type: protein-coding]","Dctn2; p50; LOC655964; TcasGA2_TC001942"]
[1304,"NC_007424.3",2263690,"SNV","T","A","Heterozygous",10,29,34.48,1,5,8,0.38,37.4,13,34,6,6,0.21,0.91,1,"no","A/T","No",1,59.78,"XP_015838609.1:c.[477A>T]; XP_015838611.1:c.[477A>T]; XP_015838608.1:c.[477A>T]; XP_008200943.1:c.[477A>T]","XP_015838609.1:p.[Leu159Phe]; XP_015838611.1:p.[Leu159Phe]; XP_015838608.1:p.[Leu159Phe]; XP_008200943.1:p.[Leu159Phe]","LOC103315043",103315043,null,"103315043 [Gene Symbol: LOC103315043] [Locus Tag: TcasGA2_TC005211] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103315043] [Gene Type: protein-coding]","LOC103315043; TcasGA2_TC005211"]
[1305,"NC_007424.3",2861824,"SNV","A","G","Homozygous",21,21,100,1,16,9,0.36,37.29,25,25,13,15,null,1,1,"no","G/G","No",1,83.89,"XP_015838621.1:c.[1813A>G]; XP_015838620.1:c.[1813A>G]; XP_015838619.1:c.[1813A>G]","XP_015838621.1:p.[Thr605Ala]; XP_015838620.1:p.[Thr605Ala]; XP_015838619.1:p.[Thr605Ala]","LOC103314397",103314397,null,"103314397 [Gene Symbol: LOC103314397] [Locus Tag: TcasGA2_TC031231] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314397] [Gene Type: protein-coding]","TcasGA2_TC031231; LOC103314397"]
[1306,"NC_007424.3",3406042,"SNV","G","A","Heterozygous",8,20,40,1,7,1,0.12,39.38,8,23,4,2,2.39,0.06,0.34,"no","complex","No",1,200,"XP_008199629.1:c.[659C>T]; NP_001035796.1:c.[611C>T]; XP_008199630.1:c.[644C>T]","XP_008199629.1:p.[Ala220Val]; NP_001035796.1:p.[Ala204Val]; XP_008199630.1:p.[Ala215Val]","Tert",658162,"telomerase reverse transcriptase","658162 [Gene Symbol: Tert] [Locus Tag: TcasGA2_TC010963] [Chromosome: LG9] [Map Location: ] [Description: telomerase reverse transcriptase] [Gene Type: protein-coding]","Tert; TcasGA2_TC010963"]
[1307,"NC_007424.3",3406043,"SNV","C","T","Heterozygous",5,22,22.73,1,5,3,0.38,36.6,8,25,3,5,-1.45,0.85,0.98,"no","complex","No",1,106.87,"XP_008199629.1:c.[658G>A]; XP_008199630.1:c.[643G>A]; NP_001035796.1:c.[610G>A]","XP_008199629.1:p.[Ala220Thr]; XP_008199630.1:p.[Ala215Thr]; NP_001035796.1:p.[Ala204Thr]","Tert",658162,"telomerase reverse transcriptase","658162 [Gene Symbol: Tert] [Locus Tag: TcasGA2_TC010963] [Chromosome: LG9] [Map Location: ] [Description: telomerase reverse transcriptase] [Gene Type: protein-coding]","Tert; TcasGA2_TC010963"]
[1308,"NC_007424.3",3489962,"SNV","C","G","Homozygous",27,27,100,1,10,17,0.37,34.41,27,27,9,12,null,1,1,"no","G/G","No",1,101.94,"XP_970874.1:c.[68C>G]; XP_008197549.1:c.[73+7171C>G]","XP_970874.1:p.Thr23Ser","LOC659477",659477,null,"659477 [Gene Symbol: LOC659477] [Locus Tag: TcasGA2_TC012272] [Chromosome: LG9] [Map Location: ] [Description: protein phosphatase PP2A 55 kDa regulatory subunit] [Gene Type: protein-coding]","TcasGA2_TC012272; LOC659477"]
[1309,"NC_007424.3",3747223,"SNV","T","G","Homozygous",23,23,100,1,4,22,0.15,38.09,26,26,8,7,null,1,1,"no","G/G","No",1,89.91,"XP_008197593.1:c.[848T>G]; XP_008197592.1:c.[899T>G]","XP_008197593.1:p.[Met283Arg]; XP_008197592.1:p.[Met300Arg]","LOC103314180",103314180,null,"103314180 [Gene Symbol: LOC103314180] [Locus Tag: TcasGA2_TC012280] [Chromosome: LG9] [Map Location: ] [Description: histone-lysine N-methyltransferase 2D] [Gene Type: protein-coding]","TcasGA2_TC012280; LOC103314180"]
[1310,"NC_007424.3",3832204,"SNV","G","A","Heterozygous",5,22,22.73,0.97,0,5,0,40.2,5,23,3,3,0.94,0.56,0.83,"no","A/G","No",1,15.58,"XP_972813.2:c.553G>A","XP_972813.2:p.Val185Met","LOC661569",661569,null,"661569 [Gene Symbol: LOC661569] [Locus Tag: TcasGA2_TC012292] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC661569] [Gene Type: protein-coding]","TcasGA2_TC012292; LOC661569"]
[1311,"NC_007424.3",3883626,"SNV","C","T","Homozygous",39,39,100,1,13,28,0.32,37.64,41,41,11,19,null,1,1,"no","T/T","No",1,139.77,"XP_015838796.1:c.[1280C>T]; XP_015838795.1:c.[1375C>T]","XP_015838796.1:p.[Ala427Val]","LOC661612",661612,null,"661612 [Gene Symbol: LOC661612] [Locus Tag: TcasGA2_TC012297] [Chromosome: LG9] [Map Location: ] [Description: 5-hydroxytryptamine receptor] [Gene Type: protein-coding]","LOC661612; TcasGA2_TC012297"]
[1312,"NC_007424.3",3886737,"SNV","C","G","Heterozygous",8,22,36.36,1,0,8,0,40.5,8,25,2,2,2.05,0.03,0.08,"no","C/G","No",1,54.1,"XP_001814302.2:c.735C>G","XP_001814302.2:p.Asn245Lys","LOC100141808",100141808,null,"100141808 [Gene Symbol: LOC100141808] [Locus Tag: TcasGA2_TC012298] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141808] [Gene Type: protein-coding]","LOC100141808; TcasGA2_TC012298"]
[1313,"NC_007424.3",3903147,"SNV","G","T","Homozygous",31,31,100,1,5,31,0.14,39.97,36,36,10,16,null,1,1,"no","T/T","No",1,115.61,"XP_008197571.1:c.525G>T","XP_008197571.1:p.Met175Ile","LOC661903",661903,null,"661903 [Gene Symbol: LOC661903] [Locus Tag: TcasGA2_TC012300] [Chromosome: LG9] [Map Location: ] [Description: nucleotide exchange factor SIL1] [Gene Type: protein-coding]","LOC661903; TcasGA2_TC012300"]
[1314,"NC_007424.3",3975286,"SNV","T","G","Homozygous",26,26,100,1,14,14,0.5,36.31,28,28,10,13,null,1,1,"no","G/G","No",1,98.93,"NP_001164246.1:c.1521A>C","NP_001164246.1:p.Gln507His","LOC662353",662353,"epsin-like protein","662353 [Gene Symbol: LOC662353] [Locus Tag: TcasGA2_TC012168] [Chromosome: LG9] [Map Location: ] [Description: epsin-like protein] [Gene Type: protein-coding]","TcasGA2_TC012168; LOC662353; GLEAN_12168"]
[1315,"NC_007424.3",3994133,"SNV","C","A","Homozygous",30,30,100,1,19,12,0.39,38.7,31,31,11,20,null,1,1,"no","A/A","No",1,112.57,"XP_015838644.1:c.1267C>A","XP_015838644.1:p.Leu423Ile","LOC662526",662526,null,"662526 [Gene Symbol: LOC662526] [Locus Tag: TcasGA2_TC012309] [Chromosome: LG9] [Map Location: ] [Description: glycogen debranching enzyme] [Gene Type: protein-coding]","TcasGA2_TC012309; LOC662526"]
[1316,"NC_007424.3",4009882,"SNV","G","T","Homozygous",21,21,100,1,17,6,0.26,38.52,23,23,7,12,null,1,1,"no","T/T","No",1,85.53,"XP_008197602.1:c.1130G>T","XP_008197602.1:p.Arg377Met","LOC662592",662592,null,"662592 [Gene Symbol: LOC662592] [Locus Tag: TcasGA2_TC012311] [Chromosome: LG9] [Map Location: ] [Description: Williams-Beuren syndrome chromosomal region 16 protein homolog] [Gene Type: protein-coding]","TcasGA2_TC012311; LOC662592"]
[1317,"NC_007424.3",4046645,"SNV","T","C","Homozygous",20,20,100,1,13,11,0.46,35.9,24,24,8,11,null,1,1,"no","C/C","No",1,80.87,"XP_015838661.1:c.[1211T>C]; XP_008197605.1:c.[1211T>C]; XP_008197604.1:c.[1211T>C]; XP_974005.1:c.[1211T>C]","XP_015838661.1:p.[Val404Ala]; XP_008197605.1:p.[Val404Ala]; XP_008197604.1:p.[Val404Ala]; XP_974005.1:p.[Val404Ala]","LOC662835",662835,null,"662835 [Gene Symbol: LOC662835] [Locus Tag: TcasGA2_TC012312] [Chromosome: LG9] [Map Location: ] [Description: phosphoglucomutase-2] [Gene Type: protein-coding]","TcasGA2_TC012312; LOC662835"]
[1318,"NC_007424.3",4078542,"SNV","G","A","Homozygous",21,21,100,1,6,15,0.29,38.19,21,21,6,15,null,1,1,"no","A/A","No",1,85.5,"XP_008197619.1:c.502G>A","XP_008197619.1:p.Val168Ile","LOC103314184",103314184,null,"103314184 [Gene Symbol: LOC103314184] [Locus Tag: TcasGA2_TC034252] [Chromosome: LG9] [Map Location: ] [Description: endothelial lipase-like] [Gene Type: protein-coding]","LOC103314184; TcasGA2_TC034252"]
[1319,"NC_007424.3",4110219,"SNV","G","T","Heterozygous",5,21,23.81,0.96,5,3,0.38,36.6,8,24,3,4,-0.17,0.38,0.98,"no","G/T","No",1,13.63,"XP_974316.3:c.[2432C>A]; XP_015838792.1:c.[2438C>A]","XP_974316.3:p.[Ser811*]; XP_015838792.1:p.[Ser813*]","LOC663164",663164,null,"663164 [Gene Symbol: LOC663164] [Locus Tag: TcasGA2_TC012147] [Chromosome: LG9] [Map Location: ] [Description: TBC1 domain family member 9] [Gene Type: protein-coding]","TcasGA2_TC012147; LOC663164; TBC1D9"]
[1320,"NC_007424.3",4447971,"SNV","C","T","Homozygous",26,26,100,1,19,11,0.37,36.92,30,30,11,22,null,1,1,"no","T/T","No",1,100.57,"XP_008197394.1:c.[845C>T]; XP_008197388.1:c.[845C>T]","XP_008197394.1:p.[Pro282Leu]; XP_008197388.1:p.[Pro282Leu]","LOC658603",658603,null,"658603 [Gene Symbol: LOC658603] [Locus Tag: TcasGA2_TC012205] [Chromosome: LG9] [Map Location: ] [Description: MICAL-like protein 1] [Gene Type: protein-coding]","TcasGA2_TC012205; LOC658603"]
[1321,"NC_007424.3",4626523,"SNV","G","A","Homozygous",20,20,100,1,2,18,0.1,39.1,20,20,6,8,null,1,1,"no","A/A","No",1,82.49,"XP_008197333.1:c.878G>A","XP_008197333.1:p.Ser293Asn","LOC103314112",103314112,null,"103314112 [Gene Symbol: LOC103314112] [Locus Tag: TcasGA2_TC012213] [Chromosome: LG9] [Map Location: ] [Description: PIH1 domain-containing protein 1] [Gene Type: protein-coding]","LOC103314112; TcasGA2_TC012213"]
[1322,"NC_007424.3",5036154,"SNV","A","G","Homozygous",21,21,100,1,8,21,0.28,38.24,29,29,8,13,null,1,1,"no","G/G","No",1,83.89,"XP_008197643.1:c.[1777A>G]; XP_008197642.1:c.[1777A>G]","XP_008197643.1:p.[Thr593Ala]; XP_008197642.1:p.[Thr593Ala]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1323,"NC_007424.3",5036665,"SNV","G","C","Homozygous",21,21,100,1,6,20,0.23,37.86,26,26,13,12,null,1,1,"no","C/C","No",1,83.89,"XP_008197643.1:c.[2288G>C]; XP_008197642.1:c.[2288G>C]","XP_008197643.1:p.[Ser763Thr]; XP_008197642.1:p.[Ser763Thr]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1324,"NC_007424.3",5037337,"SNV","G","A","Heterozygous",15,23,65.22,1,15,2,0.12,36.07,17,25,6,13,-0.19,0.45,0.33,"no","A/G","No",1,52.5,"XP_008197643.1:c.[2911G>A]; XP_008197642.1:c.[2911G>A]","XP_008197643.1:p.[Ala971Thr]; XP_008197642.1:p.[Ala971Thr]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1325,"NC_007424.3",5060989,"SNV","A","C","Homozygous",20,21,95.24,1,10,10,0.5,40.35,20,21,7,8,null,0.94,1,"no","C/C","No",1,53.17,"XP_008197649.1:c.[2880T>G]; XP_008197648.1:c.[2880T>G]","XP_008197649.1:p.[Phe960Leu]; XP_008197648.1:p.[Phe960Leu]","LOC656875",656875,null,"656875 [Gene Symbol: LOC656875] [Locus Tag: TcasGA2_TC012129] [Chromosome: LG9] [Map Location: ] [Description: transport and Golgi organization protein 1] [Gene Type: protein-coding]","TcasGA2_TC012129; LOC656875"]
[1326,"NC_007424.3",5071509,"SNV","G","A","Homozygous",34,34,100,1,4,30,0.12,38.06,34,34,7,11,null,1,1,"no","A/A","No",1,124.61,"XP_968625.1:c.211G>A","XP_968625.1:p.Val71Ile","LOC657044",657044,null,"657044 [Gene Symbol: LOC657044] [Locus Tag: TcasGA2_TC034298] [Chromosome: LG9] [Map Location: ] [Description: probable serine hydrolase] [Gene Type: protein-coding]","LOC657044; TcasGA2_TC034298"]
[1327,"NC_007424.3",5079698,"SNV","C","T","Homozygous",23,23,100,1,11,15,0.42,39.57,26,26,6,13,null,1,1,"no","T/T","No",1,91.54,"XP_008197655.1:c.[983C>T]; XP_008197658.1:c.[983C>T]; XP_008197656.1:c.[983C>T]","XP_008197655.1:p.[Pro328Leu]; XP_008197658.1:p.[Pro328Leu]; XP_008197656.1:p.[Pro328Leu]","LOC657123",657123,null,"657123 [Gene Symbol: LOC657123] [Locus Tag: TcasGA2_TC012341] [Chromosome: LG9] [Map Location: ] [Description: WAS/WASL-interacting protein family member 2] [Gene Type: protein-coding]","LOC657123; TcasGA2_TC012341"]
[1328,"NC_007424.3",5205481,"SNV","G","A","Homozygous",21,21,100,1,20,9,0.31,35.86,29,29,7,14,null,1,1,"no","A/A","No",1,85.5,"XP_966343.1:c.727C>T","XP_966343.1:p.Leu243Phe","LOC656992",656992,null,"656992 [Gene Symbol: LOC656992] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: 4-aminobutyrate aminotransferase, mitochondrial-like] [Gene Type: protein-coding]","LOC656992"]
[1329,"NC_007424.3",5261519,"SNV","G","A","Homozygous",23,23,100,1,18,5,0.22,36.7,23,23,13,16,null,1,1,"no","A/A","No",1,91.52,"XP_015838732.1:c.[4912G>A]; XP_015838724.1:c.[5116G>A]; XP_015838733.1:c.[4909G>A]; XP_015838731.1:c.[4912G>A]; XP_015838728.1:c.[4987G>A]; XP_015838729.1:c.[4858G>A]; XP_015838730.1:c.[4930G>A]; XP_015838726.1:c.[5101G>A]; XP_015838727.1:c.[4996G>A]; XP_015838725.1:c.[5110G>A]; XP_015838734.1:c.[4858G>A]; XP_008197678.1:c.[5095G>A]","XP_015838732.1:p.[Gly1638Ser]; XP_015838724.1:p.[Gly1706Ser]; XP_015838733.1:p.[Gly1637Ser]; XP_015838731.1:p.[Gly1638Ser]; XP_015838728.1:p.[Gly1663Ser]; XP_015838729.1:p.[Gly1620Ser]; XP_015838730.1:p.[Gly1644Ser]; XP_015838726.1:p.[Gly1701Ser]; XP_015838727.1:p.[Gly1666Ser]; XP_015838725.1:p.[Gly1704Ser]; XP_015838734.1:p.[Gly1620Ser]; XP_008197678.1:p.[Gly1699Ser]","Doc, LOC100141654","654492 , 100141654","dorsocross","654492 [Gene Symbol: Doc] [Locus Tag: TcasGA2_TC012346] [Chromosome: LG9] [Map Location: ] [Description: dorsocross] [Gene Type: protein-coding] || 100141654 [Gene Symbol: LOC100141654] [Locus Tag: TcasGA2_TC012347] [Chromosome: LG9] [Map Location: ] [Description: kinase D-interacting substrate of 220 kDa] [Gene Type: protein-coding]","Doc; Tc-doc; TcasGA2_TC012346 || TcasGA2_TC012347; LOC100141654"]
[1330,"NC_007424.3",5441258,"SNV","C","T","Heterozygous",7,30,23.33,0.99,3,7,0.3,38.57,10,33,2,4,1.25,0.11,0.32,"no","C/T","No",1,18.71,"XP_008197685.1:c.568G>A","XP_008197685.1:p.Val190Ile","LOC100142416",100142416,null,"100142416 [Gene Symbol: LOC100142416] [Locus Tag: TcasGA2_TC012121] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC012121; LOC100142416"]
[1331,"NC_007424.3",5481910,"SNV","T","C","Homozygous",20,20,100,1,11,13,0.46,37.2,24,24,13,12,null,1,1,"no","C/C","No",1,80.88,"XP_008197688.1:c.92A>G","XP_008197688.1:p.Asn31Ser","LOC100142216",100142216,null,"100142216 [Gene Symbol: LOC100142216] [Locus Tag: TcasGA2_TC012120] [Chromosome: LG9] [Map Location: ] [Description: proteasome-associated protein ECM29 homolog] [Gene Type: protein-coding]","LOC100142216; TcasGA2_TC012120"]
[1332,"NC_007424.3",5489134,"SNV","C","G","Homozygous",26,26,100,1,15,14,0.48,37.65,29,29,11,19,null,1,1,"no","G/G","No",1,98.93,"XP_008197689.1:c.5021C>G","XP_008197689.1:p.Ala1674Gly","LOC100142008",100142008,null,"100142008 [Gene Symbol: LOC100142008] [Locus Tag: TcasGA2_TC012353] [Chromosome: LG9] [Map Location: ] [Description: mucin-4] [Gene Type: protein-coding]","TcasGA2_TC012353; LOC100142008"]
[1333,"NC_007424.3",5489136,"SNV","C","T","Homozygous",26,26,100,1,14,17,0.45,37.73,31,31,12,18,null,1,1,"no","T/T","No",1,100.57,"XP_008197689.1:c.5023C>T","XP_008197689.1:p.Pro1675Ser","LOC100142008",100142008,null,"100142008 [Gene Symbol: LOC100142008] [Locus Tag: TcasGA2_TC012353] [Chromosome: LG9] [Map Location: ] [Description: mucin-4] [Gene Type: protein-coding]","TcasGA2_TC012353; LOC100142008"]
[1334,"NC_007424.3",5489169,"SNV","A","G","Homozygous",21,21,100,1,8,18,0.31,36.19,26,26,7,14,null,1,1,"no","G/G","No",1,83.89,"XP_008197689.1:c.5056A>G","XP_008197689.1:p.Ser1686Gly","LOC100142008",100142008,null,"100142008 [Gene Symbol: LOC100142008] [Locus Tag: TcasGA2_TC012353] [Chromosome: LG9] [Map Location: ] [Description: mucin-4] [Gene Type: protein-coding]","TcasGA2_TC012353; LOC100142008"]
[1335,"NC_007424.3",5531244,"SNV","G","A","Heterozygous",21,35,60,1,6,15,0.29,34.67,21,35,8,10,-3.6,0.93,1,"no","A/G","No",1,95.68,"XP_001812431.2:c.370G>A","XP_001812431.2:p.Ala124Thr","LOC100141868",100141868,null,"100141868 [Gene Symbol: LOC100141868] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141868] [Gene Type: protein-coding]","LOC100141868"]
[1336,"NC_007424.3",5556259,"SNV","G","C","Heterozygous",8,21,38.1,1,6,2,0.25,37.6,8,21,5,5,null,0.13,0.15,"no","complex","No",1,200,"XP_001812598.3:c.630C>G","XP_001812598.3:p.Asp210Glu","LOC100142133",100142133,null,"100142133 [Gene Symbol: LOC100142133] [Locus Tag: TcasGA2_TC012114] [Chromosome: LG9] [Map Location: ] [Description: macro domain-containing protein CT2219] [Gene Type: protein-coding]","TcasGA2_TC012114; LOC100142133"]
[1337,"NC_007424.3","5556259..5556260","MNV","GT","CC","Heterozygous",14,22,63.64,1,1,13,0.07,35.67,14,22,9,6,null,0.32,0.24,"no","complex","No",1,200,"XP_001812598.3:c.629_630delACinsGG","XP_001812598.3:p.Asp210Gly","LOC100142133",100142133,null,"100142133 [Gene Symbol: LOC100142133] [Locus Tag: TcasGA2_TC012114] [Chromosome: LG9] [Map Location: ] [Description: macro domain-containing protein CT2219] [Gene Type: protein-coding]","TcasGA2_TC012114; LOC100142133"]
[1338,"NC_007424.3",5556308,"SNV","C","T","Homozygous",35,35,100,1,17,26,0.4,37.31,43,43,18,20,null,1,1,"no","T/T","No",1,127.65,"XP_001812598.3:c.581G>A","XP_001812598.3:p.Arg194Lys","LOC100142133",100142133,null,"100142133 [Gene Symbol: LOC100142133] [Locus Tag: TcasGA2_TC012114] [Chromosome: LG9] [Map Location: ] [Description: macro domain-containing protein CT2219] [Gene Type: protein-coding]","TcasGA2_TC012114; LOC100142133"]
[1339,"NC_007424.3","5830055..5830056","MNV","AG","GA","Heterozygous",9,21,42.86,1,6,3,0.33,38.44,9,25,2,6,2.45,0.1,0.77,"no","complex","No",1,200,"XP_015838711.1:c.[1394_1395delCTinsTC]; XP_008197729.1:c.[1394_1395delCTinsTC]; XP_015838712.1:c.[1394_1395delCTinsTC]","XP_015838711.1:p.[Pro465Leu]; XP_008197729.1:p.[Pro465Leu]; XP_015838712.1:p.[Pro465Leu]","LOC659540",659540,null,"659540 [Gene Symbol: LOC659540] [Locus Tag: TcasGA2_TC012101] [Chromosome: LG9] [Map Location: ] [Description: acylamino-acid-releasing enzyme] [Gene Type: protein-coding]","LOC659540; TcasGA2_TC012101"]
[1340,"NC_007424.3",6062244,"SNV","T","G","Heterozygous",12,40,30,1,10,5,0.33,35.67,15,50,5,7,0.18,0.22,1,"no","G/T","No",1,63.24,"XP_972040.2:c.670T>G","XP_972040.2:p.Ser224Ala","LOC660740",660740,null,"660740 [Gene Symbol: LOC660740] [Locus Tag: TcasGA2_TC012390] [Chromosome: LG9] [Map Location: ] [Description: atrial natriuretic peptide-converting enzyme] [Gene Type: protein-coding]","TcasGA2_TC012390; LOC660740; H129"]
[1341,"NC_007424.3",6073850,"SNV","G","A","Heterozygous",15,21,71.43,1,13,3,0.19,38.13,16,25,7,9,-0.39,0.2,0.66,"no","A/G","No",1,32.56,"XP_972190.1:c.2477G>A","XP_972190.1:p.Arg826Lys","LOC660900",660900,null,"660900 [Gene Symbol: LOC660900] [Locus Tag: TcasGA2_TC012392] [Chromosome: LG9] [Map Location: ] [Description: CAD protein] [Gene Type: protein-coding]","LOC660900; TcasGA2_TC012392"]
[1342,"NC_007424.3",6079069,"SNV","T","C","Homozygous",17,20,85,0.74,13,4,0.24,38.76,17,20,5,14,null,0.5,0.88,"no","C/C","No",1,5.87,"XP_008197748.1:c.[721A>G]; XP_972190.1:c.[4078-3345T>C]","XP_008197748.1:p.Ile241Val","LOC660900, LOC103314202","660900 , 103314202",null,"660900 [Gene Symbol: LOC660900] [Locus Tag: TcasGA2_TC012392] [Chromosome: LG9] [Map Location: ] [Description: CAD protein] [Gene Type: protein-coding] || 103314202 [Gene Symbol: LOC103314202] [Locus Tag: TcasGA2_TC012093] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314202] [Gene Type: protein-coding]","LOC660900; TcasGA2_TC012392 || LOC103314202; TcasGA2_TC012093"]
[1343,"NC_007424.3",6079165,"SNV","T","G","Heterozygous",19,25,76,0.97,2,17,0.11,37.21,19,25,4,8,-2.99,0.39,0.36,"no","G/T","No",1,15.14,"XP_008197748.1:c.[625A>C]; XP_972190.1:c.[4078-3249T>G]","XP_008197748.1:p.Lys209Gln","LOC660900, LOC103314202","660900 , 103314202",null,"660900 [Gene Symbol: LOC660900] [Locus Tag: TcasGA2_TC012392] [Chromosome: LG9] [Map Location: ] [Description: CAD protein] [Gene Type: protein-coding] || 103314202 [Gene Symbol: LOC103314202] [Locus Tag: TcasGA2_TC012093] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314202] [Gene Type: protein-coding]","LOC660900; TcasGA2_TC012392 || LOC103314202; TcasGA2_TC012093"]
[1344,"NC_007424.3",6083665,"SNV","G","T","Heterozygous",11,24,45.83,1,4,10,0.29,37.36,14,30,4,9,0.52,0.15,0.81,"no","G/T","No",1,81.67,"XP_972190.1:c.5329G>T","XP_972190.1:p.Ala1777Ser","LOC660900",660900,null,"660900 [Gene Symbol: LOC660900] [Locus Tag: TcasGA2_TC012392] [Chromosome: LG9] [Map Location: ] [Description: CAD protein] [Gene Type: protein-coding]","LOC660900; TcasGA2_TC012392"]
[1345,"NC_007424.3",6701817,"SNV","G","T","Heterozygous",5,21,23.81,0.96,4,5,0.44,37.4,9,27,3,5,1.16,0.22,0.87,"no","G/T","No",1,13.63,"XP_966481.1:c.289G>T","XP_966481.1:p.Asp97Tyr","LOC654948",654948,null,"654948 [Gene Symbol: LOC654948] [Locus Tag: TcasGA2_TC012407] [Chromosome: LG9] [Map Location: ] [Description: methenyltetrahydrofolate synthase domain-containing protein] [Gene Type: protein-coding]","TcasGA2_TC012407; LOC654948"]
[1346,"NC_007424.3",6825789,"SNV","T","C","Homozygous",21,21,100,1,10,11,0.48,37.67,21,21,9,9,null,1,1,"no","C/C","No",1,83.89,"XP_015838844.1:c.[406A>G]; XP_015838843.1:c.[406A>G]","XP_015838844.1:p.[Ile136Val]; XP_015838843.1:p.[Ile136Val]","LOC655958",655958,null,"655958 [Gene Symbol: LOC655958] [Locus Tag: TcasGA2_TC012064] [Chromosome: LG9] [Map Location: ] [Description: UDP-glucuronosyltransferase 2A3] [Gene Type: protein-coding]","TcasGA2_TC012064; LOC655958"]
[1347,"NC_007424.3",6986535,"SNV","C","G","Homozygous",22,22,100,1,12,14,0.46,39.05,26,26,5,13,null,1,1,"no","G/G","No",1,86.9,"XP_008197803.1:c.7142G>C","XP_008197803.1:p.Gly2381Ala","LOC656538",656538,null,"656538 [Gene Symbol: LOC656538] [Locus Tag: TcasGA2_TC012058] [Chromosome: LG9] [Map Location: ] [Description: helicase domino] [Gene Type: protein-coding]","dom; domino; TcasGA2_TC012058; LOC656538"]
[1348,"NC_007424.3",7049426,"SNV","A","C","Heterozygous",5,25,20,0.92,5,0,0,39,5,37,1,4,2.38,0.06,0.32,"no","A/C","No",1,10.75,"XP_968776.1:c.299T>G","XP_968776.1:p.Leu100Arg","LOC657212",657212,null,"657212 [Gene Symbol: LOC657212] [Locus Tag: TcasGA2_TC012054] [Chromosome: LG9] [Map Location: ] [Description: probable small nuclear ribonucleoprotein Sm D2] [Gene Type: protein-coding]","TcasGA2_TC012054; LOC657212"]
[1349,"NC_007424.3",7104971,"SNV","A","G","Homozygous",26,26,100,1,15,11,0.42,37.38,26,26,7,13,null,1,1,"no","G/G","No",1,98.94,"XP_008197818.1:c.[578A>G]; XP_015838740.1:c.[578A>G]; XP_015838739.1:c.[578A>G]","XP_008197818.1:p.[Glu193Gly]; XP_015838740.1:p.[Glu193Gly]; XP_015838739.1:p.[Glu193Gly]","LOC658227",658227,null,"658227 [Gene Symbol: LOC658227] [Locus Tag: TcasGA2_TC012422] [Chromosome: LG9] [Map Location: ] [Description: ninein] [Gene Type: protein-coding]","LOC658227; TcasGA2_TC012422"]
[1350,"NC_007424.3",7257296,"SNV","C","T","Homozygous",23,23,100,1,14,9,0.39,37.04,23,23,7,16,null,1,1,"no","T/T","No",1,91.55,"XP_008197836.1:c.212C>T","XP_008197836.1:p.Ala71Val","LOC659034",659034,null,"659034 [Gene Symbol: LOC659034] [Locus Tag: TcasGA2_TC012430] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC659034; TcasGA2_TC012430"]
[1351,"NC_007424.3",7257584,"SNV","C","G","Homozygous",22,22,100,1,14,15,0.48,37.95,29,29,13,14,null,1,1,"no","G/G","No",1,86.9,"XP_008197836.1:c.500C>G","XP_008197836.1:p.Thr167Arg","LOC659034",659034,null,"659034 [Gene Symbol: LOC659034] [Locus Tag: TcasGA2_TC012430] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC659034; TcasGA2_TC012430"]
[1352,"NC_007424.3",7917372,"SNV","G","A","Homozygous",21,21,100,1,16,5,0.24,38.29,21,21,7,13,null,1,1,"no","A/A","No",1,85.5,"XP_008199913.1:c.[1091C>T]; XP_968712.2:c.[1091C>T]","XP_008199913.1:p.[Ala364Val]; XP_968712.2:p.[Ala364Val]","LOC657060, LOC657143","657060 , 657143",null,"657060 [Gene Symbol: LOC657060] [Locus Tag: TcasGA2_TC010642] [Chromosome: LG9] [Map Location: ] [Description: complexin] [Gene Type: protein-coding] || 657143 [Gene Symbol: LOC657143] [Locus Tag: TcasGA2_TC010675] [Chromosome: LG9] [Map Location: ] [Description: knickkopf 3] [Gene Type: protein-coding]","LOC657060; TcasGA2_TC010642 || TcasGA2_TC010675; LOC657143"]
[1353,"NC_007424.3",8098758,"SNV","T","C","Homozygous",21,21,100,1,6,17,0.26,37.05,23,23,8,10,null,1,1,"no","C/C","No",1,83.88,"XP_015839006.1:c.[40589A>G]; XP_015838999.1:c.[40547A>G]; XP_015839007.1:c.[30485A>G]; XP_015839002.1:c.[40472A>G]; XP_015839001.1:c.[40514A>G]; XP_015839005.1:c.[40283A>G]; XP_015839008.1:c.[30179A>G]; XP_015838997.1:c.[40562A>G]; XP_015839000.1:c.[40526A>G]; XP_015839004.1:c.[40358A>G]; XP_015838996.1:c.[40574A>G]; XP_015839003.1:c.[40400A>G]; XP_015839010.1:c.[30179A>G]; XP_015838998.1:c.[40589A>G]","XP_015839006.1:p.[Lys13530Arg]; XP_015838999.1:p.[Lys13516Arg]; XP_015839007.1:p.[Lys10162Arg]; XP_015839002.1:p.[Lys13491Arg]; XP_015839001.1:p.[Lys13505Arg]; XP_015839005.1:p.[Lys13428Arg]; XP_015839008.1:p.[Lys10060Arg]; XP_015838997.1:p.[Lys13521Arg]; XP_015839000.1:p.[Lys13509Arg]; XP_015839004.1:p.[Lys13453Arg]; XP_015838996.1:p.[Lys13525Arg]; XP_015839003.1:p.[Lys13467Arg]; XP_015839010.1:p.[Lys10060Arg]; XP_015838998.1:p.[Lys13530Arg]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1354,"NC_007424.3",8101906,"SNV","C","T","Homozygous",22,24,91.67,1,12,10,0.45,36.68,22,24,6,13,null,1,1,"no","T/T","No",1,29.45,"XP_015839010.1:c.[27031G>A]; XP_015838998.1:c.[37441G>A]; XP_015839002.1:c.[37324G>A]; XP_015839003.1:c.[37252G>A]; XP_015839007.1:c.[27337G>A]; XP_015838997.1:c.[37414G>A]; XP_015839008.1:c.[27031G>A]; XP_015839001.1:c.[37366G>A]; XP_015839006.1:c.[37441G>A]; XP_015838999.1:c.[37399G>A]; XP_015838996.1:c.[37426G>A]; XP_015839000.1:c.[37378G>A]; XP_015839005.1:c.[37135G>A]; XP_015839004.1:c.[37210G>A]","XP_015839010.1:p.[Ala9011Thr]; XP_015838998.1:p.[Ala12481Thr]; XP_015839002.1:p.[Ala12442Thr]; XP_015839003.1:p.[Ala12418Thr]; XP_015839007.1:p.[Ala9113Thr]; XP_015838997.1:p.[Ala12472Thr]; XP_015839008.1:p.[Ala9011Thr]; XP_015839001.1:p.[Ala12456Thr]; XP_015839006.1:p.[Ala12481Thr]; XP_015838999.1:p.[Ala12467Thr]; XP_015838996.1:p.[Ala12476Thr]; XP_015839000.1:p.[Ala12460Thr]; XP_015839005.1:p.[Ala12379Thr]; XP_015839004.1:p.[Ala12404Thr]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1355,"NC_007424.3",8101920,"SNV","A","C","Homozygous",35,35,100,1,25,10,0.29,37.43,35,35,9,21,null,1,1,"no","C/C","No",1,126.02,"XP_015839010.1:c.[27017T>G]; XP_015838996.1:c.[37412T>G]; XP_015839008.1:c.[27017T>G]; XP_015839001.1:c.[37352T>G]; XP_015838997.1:c.[37400T>G]; XP_015839004.1:c.[37196T>G]; XP_015839000.1:c.[37364T>G]; XP_015839003.1:c.[37238T>G]; XP_015838998.1:c.[37427T>G]; XP_015839002.1:c.[37310T>G]; XP_015839007.1:c.[27323T>G]; XP_015838999.1:c.[37385T>G]; XP_015839006.1:c.[37427T>G]; XP_015839005.1:c.[37121T>G]","XP_015839010.1:p.[Ile9006Ser]; XP_015838996.1:p.[Ile12471Ser]; XP_015839008.1:p.[Ile9006Ser]; XP_015839001.1:p.[Ile12451Ser]; XP_015838997.1:p.[Ile12467Ser]; XP_015839004.1:p.[Ile12399Ser]; XP_015839000.1:p.[Ile12455Ser]; XP_015839003.1:p.[Ile12413Ser]; XP_015838998.1:p.[Ile12476Ser]; XP_015839002.1:p.[Ile12437Ser]; XP_015839007.1:p.[Ile9108Ser]; XP_015838999.1:p.[Ile12462Ser]; XP_015839006.1:p.[Ile12476Ser]; XP_015839005.1:p.[Ile12374Ser]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1356,"NC_007424.3","8102020..8102021","MNV","TC","CT","Homozygous",29,29,100,1,14,18,0.44,36.76,32,32,13,16,null,1,1,"no","CT/CT","No",1,200,"XP_015839003.1:c.[37137_37138delGAinsAG]; XP_015839002.1:c.[37209_37210delGAinsAG]; XP_015838996.1:c.[37311_37312delGAinsAG]; XP_015839005.1:c.[37020_37021delGAinsAG]; XP_015839001.1:c.[37251_37252delGAinsAG]; XP_015838998.1:c.[37326_37327delGAinsAG]; XP_015839007.1:c.[27222_27223delGAinsAG]; XP_015839006.1:c.[37326_37327delGAinsAG]; XP_015839010.1:c.[26916_26917delGAinsAG]; XP_015838997.1:c.[37299_37300delGAinsAG]; XP_015839000.1:c.[37263_37264delGAinsAG]; XP_015839004.1:c.[37095_37096delGAinsAG]; XP_015838999.1:c.[37284_37285delGAinsAG]; XP_015839008.1:c.[26916_26917delGAinsAG]","XP_015839003.1:p.[Ile12380Val]; XP_015839002.1:p.[Ile12404Val]; XP_015838996.1:p.[Ile12438Val]; XP_015839005.1:p.[Ile12341Val]; XP_015839001.1:p.[Ile12418Val]; XP_015838998.1:p.[Ile12443Val]; XP_015839007.1:p.[Ile9075Val]; XP_015839006.1:p.[Ile12443Val]; XP_015839010.1:p.[Ile8973Val]; XP_015838997.1:p.[Ile12434Val]; XP_015839000.1:p.[Ile12422Val]; XP_015839004.1:p.[Ile12366Val]; XP_015838999.1:p.[Ile12429Val]; XP_015839008.1:p.[Ile8973Val]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1357,"NC_007424.3",8107603,"SNV","T","C","Homozygous",21,21,100,1,10,14,0.42,37.24,24,24,10,12,null,1,1,"no","C/C","No",1,83.89,"XP_015839005.1:c.[32518A>G]; XP_015838996.1:c.[32809A>G]; XP_015839008.1:c.[23422-1218A>G]; XP_015839004.1:c.[32593A>G]; XP_015838997.1:c.[32797A>G]; XP_015838998.1:c.[32824A>G]; XP_015839003.1:c.[32635A>G]; XP_015839007.1:c.[23728-1218A>G]; XP_015839006.1:c.[32824A>G]; XP_015839000.1:c.[32761A>G]; XP_015838999.1:c.[32782A>G]; XP_015839010.1:c.[23422-1218A>G]; XP_015839002.1:c.[32707A>G]; XP_015839001.1:c.[32749A>G]","XP_015839005.1:p.[Ile10840Val]; XP_015838996.1:p.[Ile10937Val]; XP_015839004.1:p.[Ile10865Val]; XP_015838997.1:p.[Ile10933Val]; XP_015838998.1:p.[Ile10942Val]; XP_015839003.1:p.[Ile10879Val]; XP_015839006.1:p.[Ile10942Val]; XP_015839000.1:p.[Ile10921Val]; XP_015838999.1:p.[Ile10928Val]; XP_015839002.1:p.[Ile10903Val]; XP_015839001.1:p.[Ile10917Val]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1358,"NC_007424.3",8108079,"SNV","T","C","Homozygous",23,23,100,1,11,15,0.42,37.7,26,26,10,15,null,1,1,"no","C/C","No",1,89.9,"XP_015839002.1:c.[32231A>G]; XP_015839004.1:c.[32117A>G]; XP_015838996.1:c.[32333A>G]; XP_015839010.1:c.[23422-1694A>G]; XP_015838999.1:c.[32306A>G]; XP_015838998.1:c.[32348A>G]; XP_015839001.1:c.[32273A>G]; XP_015838997.1:c.[32321A>G]; XP_015839007.1:c.[23728-1694A>G]; XP_015839003.1:c.[32159A>G]; XP_015839000.1:c.[32285A>G]; XP_015839006.1:c.[32348A>G]; XP_015839005.1:c.[32042A>G]; XP_015839008.1:c.[23422-1694A>G]","XP_015839002.1:p.[Glu10744Gly]; XP_015839004.1:p.[Glu10706Gly]; XP_015838996.1:p.[Glu10778Gly]; XP_015838999.1:p.[Glu10769Gly]; XP_015838998.1:p.[Glu10783Gly]; XP_015839001.1:p.[Glu10758Gly]; XP_015838997.1:p.[Glu10774Gly]; XP_015839003.1:p.[Glu10720Gly]; XP_015839000.1:p.[Glu10762Gly]; XP_015839006.1:p.[Glu10783Gly]; XP_015839005.1:p.[Glu10681Gly]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1359,"NC_007424.3",8109081,"SNV","T","A","Homozygous",21,21,100,1,14,14,0.5,38.43,28,28,10,17,null,1,1,"no","A/A","No",1,85.5,"XP_015839010.1:c.[23422-2696A>T]; XP_015839005.1:c.[31040A>T]; XP_015839002.1:c.[31229A>T]; XP_015839006.1:c.[31346A>T]; XP_015838998.1:c.[31346A>T]; XP_015838996.1:c.[31331A>T]; XP_015839000.1:c.[31283A>T]; XP_015839008.1:c.[23422-2696A>T]; XP_015839004.1:c.[31115A>T]; XP_015838999.1:c.[31304A>T]; XP_015839007.1:c.[23728-2696A>T]; XP_015839001.1:c.[31271A>T]; XP_015838997.1:c.[31319A>T]; XP_015839003.1:c.[31157A>T]","XP_015839005.1:p.[Gln10347Leu]; XP_015839002.1:p.[Gln10410Leu]; XP_015839006.1:p.[Gln10449Leu]; XP_015838998.1:p.[Gln10449Leu]; XP_015838996.1:p.[Gln10444Leu]; XP_015839000.1:p.[Gln10428Leu]; XP_015839004.1:p.[Gln10372Leu]; XP_015838999.1:p.[Gln10435Leu]; XP_015839001.1:p.[Gln10424Leu]; XP_015838997.1:p.[Gln10440Leu]; XP_015839003.1:p.[Gln10386Leu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1360,"NC_007424.3",8109407,"SNV","G","T","Homozygous",20,20,100,1,18,8,0.31,38.25,26,26,8,13,null,1,1,"no","T/T","No",1,82.52,"XP_015838996.1:c.[31005C>A]; XP_015838998.1:c.[31020C>A]; XP_015839007.1:c.[23728-3022C>A]; XP_015839003.1:c.[30831C>A]; XP_015839005.1:c.[30714C>A]; XP_015839004.1:c.[30789C>A]; XP_015839010.1:c.[23422-3022C>A]; XP_015839002.1:c.[30903C>A]; XP_015838999.1:c.[30978C>A]; XP_015839006.1:c.[31020C>A]; XP_015838997.1:c.[30993C>A]; XP_015839008.1:c.[23422-3022C>A]; XP_015839001.1:c.[30945C>A]; XP_015839000.1:c.[30957C>A]","XP_015838996.1:p.[Asp10335Glu]; XP_015838998.1:p.[Asp10340Glu]; XP_015839003.1:p.[Asp10277Glu]; XP_015839005.1:p.[Asp10238Glu]; XP_015839004.1:p.[Asp10263Glu]; XP_015839002.1:p.[Asp10301Glu]; XP_015838999.1:p.[Asp10326Glu]; XP_015839006.1:p.[Asp10340Glu]; XP_015838997.1:p.[Asp10331Glu]; XP_015839001.1:p.[Asp10315Glu]; XP_015839000.1:p.[Asp10319Glu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1361,"NC_007424.3",8109726,"SNV","A","G","Homozygous",25,25,100,1,20,14,0.41,38.8,34,34,9,17,null,1,1,"no","G/G","No",1,95.93,"XP_015839003.1:c.[30512T>C]; XP_015838999.1:c.[30659T>C]; XP_015838996.1:c.[30686T>C]; XP_015839005.1:c.[30395T>C]; XP_015839000.1:c.[30638T>C]; XP_015839001.1:c.[30626T>C]; XP_015839008.1:c.[23422-3341T>C]; XP_015839007.1:c.[23728-3341T>C]; XP_015839004.1:c.[30470T>C]; XP_015839002.1:c.[30584T>C]; XP_015838997.1:c.[30674T>C]; XP_015838998.1:c.[30701T>C]; XP_015839006.1:c.[30701T>C]; XP_015839010.1:c.[23422-3341T>C]","XP_015839003.1:p.[Leu10171Pro]; XP_015838999.1:p.[Leu10220Pro]; XP_015838996.1:p.[Leu10229Pro]; XP_015839005.1:p.[Leu10132Pro]; XP_015839000.1:p.[Leu10213Pro]; XP_015839001.1:p.[Leu10209Pro]; XP_015839004.1:p.[Leu10157Pro]; XP_015839002.1:p.[Leu10195Pro]; XP_015838997.1:p.[Leu10225Pro]; XP_015838998.1:p.[Leu10234Pro]; XP_015839006.1:p.[Leu10234Pro]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1362,"NC_007424.3",8109850,"SNV","C","T","Homozygous",22,22,100,1,4,18,0.18,37.5,22,22,8,9,null,1,1,"no","T/T","No",1,88.54,"XP_015839006.1:c.[30577G>A]; XP_015839004.1:c.[30346G>A]; XP_015839005.1:c.[30271G>A]; XP_015839010.1:c.[23422-3465G>A]; XP_015839007.1:c.[23728-3465G>A]; XP_015839003.1:c.[30388G>A]; XP_015838998.1:c.[30577G>A]; XP_015839008.1:c.[23422-3465G>A]; XP_015838997.1:c.[30550G>A]; XP_015838996.1:c.[30562G>A]; XP_015839002.1:c.[30460G>A]; XP_015839001.1:c.[30502G>A]; XP_015839000.1:c.[30514G>A]; XP_015838999.1:c.[30535G>A]","XP_015839006.1:p.[Ala10193Thr]; XP_015839004.1:p.[Ala10116Thr]; XP_015839005.1:p.[Ala10091Thr]; XP_015839003.1:p.[Ala10130Thr]; XP_015838998.1:p.[Ala10193Thr]; XP_015838997.1:p.[Ala10184Thr]; XP_015838996.1:p.[Ala10188Thr]; XP_015839002.1:p.[Ala10154Thr]; XP_015839001.1:p.[Ala10168Thr]; XP_015839000.1:p.[Ala10172Thr]; XP_015838999.1:p.[Ala10179Thr]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1363,"NC_007424.3",8116393,"SNV","T","C","Homozygous",22,22,100,1,18,12,0.4,35.86,30,30,10,15,null,1,1,"no","C/C","No",1,86.89,"XP_015838998.1:c.[24034A>G]; XP_015839001.1:c.[23959A>G]; XP_015839007.1:c.[23727+1210A>G]; XP_015839006.1:c.[24034A>G]; XP_015839008.1:c.[23421+1210A>G]; XP_015839004.1:c.[23803A>G]; XP_015838996.1:c.[24019A>G]; XP_015839000.1:c.[24034A>G]; XP_015839005.1:c.[23728A>G]; XP_015838999.1:c.[23992A>G]; XP_015839002.1:c.[23917A>G]; XP_015838997.1:c.[24007A>G]; XP_015839010.1:c.[23421+1210A>G]; XP_015839003.1:c.[23845A>G]","XP_015838998.1:p.[Lys8012Glu]; XP_015839001.1:p.[Lys7987Glu]; XP_015839006.1:p.[Lys8012Glu]; XP_015839004.1:p.[Lys7935Glu]; XP_015838996.1:p.[Lys8007Glu]; XP_015839000.1:p.[Lys8012Glu]; XP_015839005.1:p.[Lys7910Glu]; XP_015838999.1:p.[Lys7998Glu]; XP_015839002.1:p.[Lys7973Glu]; XP_015838997.1:p.[Lys8003Glu]; XP_015839003.1:p.[Lys7949Glu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1364,"NC_007424.3",8116461,"SNV","T","G","Homozygous",20,20,100,1,7,16,0.3,37.75,23,23,5,15,null,1,1,"no","G/G","No",1,80.88,"XP_015838999.1:c.[23924A>C]; XP_015838996.1:c.[23951A>C]; XP_015839007.1:c.[23727+1142A>C]; XP_015838997.1:c.[23939A>C]; XP_015839003.1:c.[23777A>C]; XP_015839000.1:c.[23966A>C]; XP_015839005.1:c.[23660A>C]; XP_015839002.1:c.[23849A>C]; XP_015839001.1:c.[23891A>C]; XP_015839010.1:c.[23421+1142A>C]; XP_015838998.1:c.[23966A>C]; XP_015839004.1:c.[23735A>C]; XP_015839006.1:c.[23966A>C]; XP_015839008.1:c.[23421+1142A>C]","XP_015838999.1:p.[Asp7975Ala]; XP_015838996.1:p.[Asp7984Ala]; XP_015838997.1:p.[Asp7980Ala]; XP_015839003.1:p.[Asp7926Ala]; XP_015839000.1:p.[Asp7989Ala]; XP_015839005.1:p.[Asp7887Ala]; XP_015839002.1:p.[Asp7950Ala]; XP_015839001.1:p.[Asp7964Ala]; XP_015838998.1:p.[Asp7989Ala]; XP_015839004.1:p.[Asp7912Ala]; XP_015839006.1:p.[Asp7989Ala]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1365,"NC_007424.3",8118737,"SNV","T","C","Homozygous",22,22,100,1,2,20,0.09,36,22,22,4,6,null,1,1,"no","C/C","No",1,86.9,"XP_015838997.1:c.[22666A>G]; XP_015838998.1:c.[22693A>G]; XP_015839009.1:c.[22693A>G]; XP_015839008.1:c.[22387A>G]; XP_015838996.1:c.[22678A>G]; XP_015839010.1:c.[22387A>G]; XP_015839003.1:c.[22504A>G]; XP_015839004.1:c.[22462A>G]; XP_015839007.1:c.[22693A>G]; XP_015839002.1:c.[22576A>G]; XP_015839001.1:c.[22618A>G]; XP_015839000.1:c.[22693A>G]; XP_015839005.1:c.[22387A>G]; XP_015838999.1:c.[22651A>G]; XP_015839006.1:c.[22693A>G]; XP_015839011.1:c.[22576A>G]","XP_015838997.1:p.[Ser7556Gly]; XP_015838998.1:p.[Ser7565Gly]; XP_015839009.1:p.[Ser7565Gly]; XP_015839008.1:p.[Ser7463Gly]; XP_015838996.1:p.[Ser7560Gly]; XP_015839010.1:p.[Ser7463Gly]; XP_015839003.1:p.[Ser7502Gly]; XP_015839004.1:p.[Ser7488Gly]; XP_015839007.1:p.[Ser7565Gly]; XP_015839002.1:p.[Ser7526Gly]; XP_015839001.1:p.[Ser7540Gly]; XP_015839000.1:p.[Ser7565Gly]; XP_015839005.1:p.[Ser7463Gly]; XP_015838999.1:p.[Ser7551Gly]; XP_015839006.1:p.[Ser7565Gly]; XP_015839011.1:p.[Ser7526Gly]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1366,"NC_007424.3",8126204,"SNV","A","G","Homozygous",24,24,100,1,18,7,0.28,35.92,25,25,8,19,null,1,1,"no","G/G","No",1,92.91,"XP_015839003.1:c.[19327T>C]; XP_015839000.1:c.[19516T>C]; XP_015839004.1:c.[19285T>C]; XP_015839009.1:c.[19516T>C]; XP_015838997.1:c.[19489T>C]; XP_015839011.1:c.[19399T>C]; XP_015838996.1:c.[19501T>C]; XP_015839001.1:c.[19441T>C]; XP_015839005.1:c.[19210T>C]; XP_015839002.1:c.[19399T>C]; XP_015839007.1:c.[19516T>C]; XP_015839008.1:c.[19210T>C]; XP_015839010.1:c.[19210T>C]; XP_015839006.1:c.[19516T>C]; XP_015838998.1:c.[19516T>C]; XP_015838999.1:c.[19474T>C]","XP_015839003.1:p.[Phe6443Leu]; XP_015839000.1:p.[Phe6506Leu]; XP_015839004.1:p.[Phe6429Leu]; XP_015839009.1:p.[Phe6506Leu]; XP_015838997.1:p.[Phe6497Leu]; XP_015839011.1:p.[Phe6467Leu]; XP_015838996.1:p.[Phe6501Leu]; XP_015839001.1:p.[Phe6481Leu]; XP_015839005.1:p.[Phe6404Leu]; XP_015839002.1:p.[Phe6467Leu]; XP_015839007.1:p.[Phe6506Leu]; XP_015839008.1:p.[Phe6404Leu]; XP_015839010.1:p.[Phe6404Leu]; XP_015839006.1:p.[Phe6506Leu]; XP_015838998.1:p.[Phe6506Leu]; XP_015838999.1:p.[Phe6492Leu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1367,"NC_007424.3",8135732,"SNV","A","G","Heterozygous",6,24,25,1,0,6,0,37.5,6,24,3,4,0.07,0.03,0.72,"no","A/G","No",1,24.23,"XP_015839004.1:c.[12367T>C]; XP_015839003.1:c.[12409T>C]; XP_015839007.1:c.[12598T>C]; XP_015838996.1:c.[12583T>C]; XP_015839006.1:c.[12598T>C]; XP_015839011.1:c.[12481T>C]; XP_015839010.1:c.[12292T>C]; XP_015839000.1:c.[12598T>C]; XP_015838999.1:c.[12556T>C]; XP_015838997.1:c.[12571T>C]; XP_015839001.1:c.[12523T>C]; XP_015839008.1:c.[12292T>C]; XP_015839005.1:c.[12292T>C]; XP_015839002.1:c.[12481T>C]; XP_015838998.1:c.[12598T>C]; XP_015839009.1:c.[12598T>C]","XP_015839004.1:p.[Ser4123Pro]; XP_015839003.1:p.[Ser4137Pro]; XP_015839007.1:p.[Ser4200Pro]; XP_015838996.1:p.[Ser4195Pro]; XP_015839006.1:p.[Ser4200Pro]; XP_015839011.1:p.[Ser4161Pro]; XP_015839010.1:p.[Ser4098Pro]; XP_015839000.1:p.[Ser4200Pro]; XP_015838999.1:p.[Ser4186Pro]; XP_015838997.1:p.[Ser4191Pro]; XP_015839001.1:p.[Ser4175Pro]; XP_015839008.1:p.[Ser4098Pro]; XP_015839005.1:p.[Ser4098Pro]; XP_015839002.1:p.[Ser4161Pro]; XP_015838998.1:p.[Ser4200Pro]; XP_015839009.1:p.[Ser4200Pro]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1368,"NC_007424.3",8136470,"SNV","T","G","Homozygous",20,20,100,1,20,4,0.17,38.2,24,24,9,13,null,1,1,"no","G/G","No",1,80.88,"XP_015839005.1:c.[11787A>C]; XP_015838998.1:c.[12018A>C]; XP_015838999.1:c.[11976A>C]; XP_015838997.1:c.[11991A>C]; XP_015839000.1:c.[12018A>C]; XP_015839010.1:c.[11787A>C]; XP_015839003.1:c.[11829A>C]; XP_015838996.1:c.[12003A>C]; XP_015839008.1:c.[11787A>C]; XP_015839002.1:c.[11976A>C]; XP_015839009.1:c.[12018A>C]; XP_015839007.1:c.[12018A>C]; XP_015839011.1:c.[11976A>C]; XP_015839006.1:c.[12018A>C]; XP_015839004.1:c.[11787A>C]; XP_015839001.1:c.[12018A>C]","XP_015839005.1:p.[Arg3929Ser]; XP_015838998.1:p.[Arg4006Ser]; XP_015838999.1:p.[Arg3992Ser]; XP_015838997.1:p.[Arg3997Ser]; XP_015839000.1:p.[Arg4006Ser]; XP_015839010.1:p.[Arg3929Ser]; XP_015839003.1:p.[Arg3943Ser]; XP_015838996.1:p.[Arg4001Ser]; XP_015839008.1:p.[Arg3929Ser]; XP_015839002.1:p.[Arg3992Ser]; XP_015839009.1:p.[Arg4006Ser]; XP_015839007.1:p.[Arg4006Ser]; XP_015839011.1:p.[Arg3992Ser]; XP_015839006.1:p.[Arg4006Ser]; XP_015839004.1:p.[Arg3929Ser]; XP_015839001.1:p.[Arg4006Ser]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1369,"NC_007424.3",8136635,"SNV","A","T","Homozygous",35,41,85.37,1,13,29,0.31,38.46,42,50,16,18,null,0.84,1,"no","T/T","No",1,24.76,"XP_015838996.1:c.[11838T>A]; XP_015839009.1:c.[11853T>A]; XP_015839003.1:c.[11664T>A]; XP_015838997.1:c.[11826T>A]; XP_015838999.1:c.[11811T>A]; XP_015839007.1:c.[11853T>A]; XP_015839008.1:c.[11622T>A]; XP_015839005.1:c.[11622T>A]; XP_015839000.1:c.[11853T>A]; XP_015839001.1:c.[11853T>A]; XP_015839006.1:c.[11853T>A]; XP_015838998.1:c.[11853T>A]; XP_015839011.1:c.[11811T>A]; XP_015839004.1:c.[11622T>A]; XP_015839010.1:c.[11622T>A]; XP_015839002.1:c.[11811T>A]","XP_015838996.1:p.[Asp3946Glu]; XP_015839009.1:p.[Asp3951Glu]; XP_015839003.1:p.[Asp3888Glu]; XP_015838997.1:p.[Asp3942Glu]; XP_015838999.1:p.[Asp3937Glu]; XP_015839007.1:p.[Asp3951Glu]; XP_015839008.1:p.[Asp3874Glu]; XP_015839005.1:p.[Asp3874Glu]; XP_015839000.1:p.[Asp3951Glu]; XP_015839001.1:p.[Asp3951Glu]; XP_015839006.1:p.[Asp3951Glu]; XP_015838998.1:p.[Asp3951Glu]; XP_015839011.1:p.[Asp3937Glu]; XP_015839004.1:p.[Asp3874Glu]; XP_015839010.1:p.[Asp3874Glu]; XP_015839002.1:p.[Asp3937Glu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1370,"NC_007424.3",8136644,"SNV","C","A","Homozygous",27,33,81.82,0.55,12,22,0.35,38.07,34,42,13,14,1.73,0.91,1,"no","A/C","No",1,3.43,"XP_015839004.1:c.[11613G>T]; XP_015839001.1:c.[11844G>T]; XP_015838999.1:c.[11802G>T]; XP_015839005.1:c.[11613G>T]; XP_015839003.1:c.[11655G>T]; XP_015839000.1:c.[11844G>T]; XP_015838996.1:c.[11829G>T]; XP_015839007.1:c.[11844G>T]; XP_015839011.1:c.[11802G>T]; XP_015839002.1:c.[11802G>T]; XP_015839009.1:c.[11844G>T]; XP_015839010.1:c.[11613G>T]; XP_015838997.1:c.[11817G>T]; XP_015838998.1:c.[11844G>T]; XP_015839006.1:c.[11844G>T]; XP_015839008.1:c.[11613G>T]","XP_015839004.1:p.[Glu3871Asp]; XP_015839001.1:p.[Glu3948Asp]; XP_015838999.1:p.[Glu3934Asp]; XP_015839005.1:p.[Glu3871Asp]; XP_015839003.1:p.[Glu3885Asp]; XP_015839000.1:p.[Glu3948Asp]; XP_015838996.1:p.[Glu3943Asp]; XP_015839007.1:p.[Glu3948Asp]; XP_015839011.1:p.[Glu3934Asp]; XP_015839002.1:p.[Glu3934Asp]; XP_015839009.1:p.[Glu3948Asp]; XP_015839010.1:p.[Glu3871Asp]; XP_015838997.1:p.[Glu3939Asp]; XP_015838998.1:p.[Glu3948Asp]; XP_015839006.1:p.[Glu3948Asp]; XP_015839008.1:p.[Glu3871Asp]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1371,"NC_007424.3","8137957..8137958","MNV","GT","AG","Heterozygous",7,20,35,1,1,7,0.12,34.93,8,21,5,5,-3.13,0.06,0.53,"no","complex","No",1,200,"XP_015838999.1:c.[10488_10489delACinsCT]; XP_015839008.1:c.[10299_10300delACinsCT]; XP_015839005.1:c.[10299_10300delACinsCT]; XP_015839004.1:c.[10299_10300delACinsCT]; XP_015839002.1:c.[10488_10489delACinsCT]; XP_015838996.1:c.[10515_10516delACinsCT]; XP_015839000.1:c.[10530_10531delACinsCT]; XP_015838997.1:c.[10503_10504delACinsCT]; XP_015839001.1:c.[10530_10531delACinsCT]; XP_015839011.1:c.[10488_10489delACinsCT]; XP_015839003.1:c.[10341_10342delACinsCT]; XP_015839007.1:c.[10530_10531delACinsCT]; XP_015839009.1:c.[10530_10531delACinsCT]; XP_015839006.1:c.[10530_10531delACinsCT]; XP_015838998.1:c.[10530_10531delACinsCT]; XP_015839010.1:c.[10299_10300delACinsCT]","XP_015838999.1:p.[Leu3496Phe]; XP_015839008.1:p.[Leu3433Phe]; XP_015839005.1:p.[Leu3433Phe]; XP_015839004.1:p.[Leu3433Phe]; XP_015839002.1:p.[Leu3496Phe]; XP_015838996.1:p.[Leu3505Phe]; XP_015839000.1:p.[Leu3510Phe]; XP_015838997.1:p.[Leu3501Phe]; XP_015839001.1:p.[Leu3510Phe]; XP_015839011.1:p.[Leu3496Phe]; XP_015839003.1:p.[Leu3447Phe]; XP_015839007.1:p.[Leu3510Phe]; XP_015839009.1:p.[Leu3510Phe]; XP_015839006.1:p.[Leu3510Phe]; XP_015838998.1:p.[Leu3510Phe]; XP_015839010.1:p.[Leu3433Phe]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1372,"NC_007424.3","8143399..8143400","MNV","AA","TG","Homozygous",40,40,100,1,34,16,0.32,38.05,50,50,10,24,null,1,1,"no","TG/TG","No",1,200,"XP_015839007.1:c.[5088_5089delTTinsCA]; XP_015838997.1:c.[5061_5062delTTinsCA]; XP_015839008.1:c.[4857_4858delTTinsCA]; XP_015838996.1:c.[5073_5074delTTinsCA]; XP_015839009.1:c.[5088_5089delTTinsCA]; XP_015839001.1:c.[5088_5089delTTinsCA]; XP_015838998.1:c.[5088_5089delTTinsCA]; XP_015838999.1:c.[5046_5047delTTinsCA]; XP_015839011.1:c.[5046_5047delTTinsCA]; XP_015839005.1:c.[4857_4858delTTinsCA]; XP_015839010.1:c.[4857_4858delTTinsCA]; XP_015839000.1:c.[5088_5089delTTinsCA]; XP_015839002.1:c.[5046_5047delTTinsCA]; XP_015839006.1:c.[5088_5089delTTinsCA]; XP_015839003.1:c.[4899_4900delTTinsCA]; XP_015839004.1:c.[4857_4858delTTinsCA]","XP_015839007.1:p.[Cys1697Ser]; XP_015838997.1:p.[Cys1688Ser]; XP_015839008.1:p.[Cys1620Ser]; XP_015838996.1:p.[Cys1692Ser]; XP_015839009.1:p.[Cys1697Ser]; XP_015839001.1:p.[Cys1697Ser]; XP_015838998.1:p.[Cys1697Ser]; XP_015838999.1:p.[Cys1683Ser]; XP_015839011.1:p.[Cys1683Ser]; XP_015839005.1:p.[Cys1620Ser]; XP_015839010.1:p.[Cys1620Ser]; XP_015839000.1:p.[Cys1697Ser]; XP_015839002.1:p.[Cys1683Ser]; XP_015839006.1:p.[Cys1697Ser]; XP_015839003.1:p.[Cys1634Ser]; XP_015839004.1:p.[Cys1620Ser]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1373,"NC_007424.3","8144268..8144269","MNV","GT","AC","Heterozygous",6,21,28.57,1,4,4,0.5,38.5,8,27,5,5,2.05,0.19,0.7,"no","complex","No",1,200,"XP_015839008.1:c.[3988_3989delACinsGT]; XP_015838996.1:c.[4204_4205delACinsGT]; XP_015839003.1:c.[4030_4031delACinsGT]; XP_015839001.1:c.[4219_4220delACinsGT]; XP_015838998.1:c.[4219_4220delACinsGT]; XP_015839004.1:c.[3988_3989delACinsGT]; XP_015839009.1:c.[4219_4220delACinsGT]; XP_015838997.1:c.[4192_4193delACinsGT]; XP_015839010.1:c.[3988_3989delACinsGT]; XP_015839002.1:c.[4177_4178delACinsGT]; XP_015839005.1:c.[3988_3989delACinsGT]; XP_015839006.1:c.[4219_4220delACinsGT]; XP_015839007.1:c.[4219_4220delACinsGT]; XP_015838999.1:c.[4177_4178delACinsGT]; XP_015839000.1:c.[4219_4220delACinsGT]; XP_015839011.1:c.[4177_4178delACinsGT]","XP_015839008.1:p.[Thr1330Val]; XP_015838996.1:p.[Thr1402Val]; XP_015839003.1:p.[Thr1344Val]; XP_015839001.1:p.[Thr1407Val]; XP_015838998.1:p.[Thr1407Val]; XP_015839004.1:p.[Thr1330Val]; XP_015839009.1:p.[Thr1407Val]; XP_015838997.1:p.[Thr1398Val]; XP_015839010.1:p.[Thr1330Val]; XP_015839002.1:p.[Thr1393Val]; XP_015839005.1:p.[Thr1330Val]; XP_015839006.1:p.[Thr1407Val]; XP_015839007.1:p.[Thr1407Val]; XP_015838999.1:p.[Thr1393Val]; XP_015839000.1:p.[Thr1407Val]; XP_015839011.1:p.[Thr1393Val]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1374,"NC_007424.3",8152695,"SNV","A","T","Homozygous",20,20,100,1,9,14,0.39,38.35,23,23,13,13,null,1,1,"no","T/T","No",1,82.52,"XP_015838996.1:c.[1550T>A]; XP_015839009.1:c.[1550T>A]; XP_015839005.1:c.[1334T>A]; XP_015838999.1:c.[1523T>A]; XP_015838997.1:c.[1523T>A]; XP_015839001.1:c.[1550T>A]; XP_015839000.1:c.[1550T>A]; XP_015839006.1:c.[1550T>A]; XP_015838998.1:c.[1550T>A]; XP_015839007.1:c.[1550T>A]; XP_015839004.1:c.[1334T>A]; XP_015839010.1:c.[1334T>A]; XP_015839011.1:c.[1523T>A]; XP_015839002.1:c.[1523T>A]; XP_015839008.1:c.[1334T>A]; XP_015839003.1:c.[1361T>A]","XP_015838996.1:p.[Leu517Gln]; XP_015839009.1:p.[Leu517Gln]; XP_015839005.1:p.[Leu445Gln]; XP_015838999.1:p.[Leu508Gln]; XP_015838997.1:p.[Leu508Gln]; XP_015839001.1:p.[Leu517Gln]; XP_015839000.1:p.[Leu517Gln]; XP_015839006.1:p.[Leu517Gln]; XP_015838998.1:p.[Leu517Gln]; XP_015839007.1:p.[Leu517Gln]; XP_015839004.1:p.[Leu445Gln]; XP_015839010.1:p.[Leu445Gln]; XP_015839011.1:p.[Leu508Gln]; XP_015839002.1:p.[Leu508Gln]; XP_015839008.1:p.[Leu445Gln]; XP_015839003.1:p.[Leu454Gln]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1375,"NC_007424.3",8296982,"SNV","A","G","Homozygous",21,21,100,1,10,16,0.38,36.19,26,26,7,13,null,1,1,"no","G/G","No",1,83.89,"XP_008199895.1:c.3695T>C","XP_008199895.1:p.Val1232Ala","LOC654954",654954,null,"654954 [Gene Symbol: LOC654954] [Locus Tag: TcasGA2_TC010657] [Chromosome: LG9] [Map Location: ] [Description: disintegrin and metalloproteinase domain-containing protein 12] [Gene Type: protein-coding]","LOC654954; TcasGA2_TC010657"]
[1376,"NC_007424.3",8323316,"SNV","G","A","Heterozygous",9,23,39.13,1,4,5,0.44,37,9,26,6,7,-0.72,0.83,1,"no","A/G","No",1,63.67,"XP_015839243.1:c.[653C>T]; XP_008199895.1:c.[88+2727C>T]","XP_015839243.1:p.Pro218Leu","LOC654954, LOC107398688","654954 , 107398688",null,"654954 [Gene Symbol: LOC654954] [Locus Tag: TcasGA2_TC010657] [Chromosome: LG9] [Map Location: ] [Description: disintegrin and metalloproteinase domain-containing protein 12] [Gene Type: protein-coding] || 107398688 [Gene Symbol: LOC107398688] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC107398688] [Gene Type: protein-coding]","LOC654954; TcasGA2_TC010657 || LOC107398688"]
[1377,"NC_007424.3",8653817,"SNV","G","A","Homozygous",32,32,100,1,25,11,0.31,36.91,36,36,15,18,null,1,1,"no","A/A","No",1,118.6,"XP_008196003.1:c.3557C>T","XP_008196003.1:p.Pro1186Leu","LOC656210",656210,null,"656210 [Gene Symbol: LOC656210] [Locus Tag: TcasGA2_TC012007] [Chromosome: LG9] [Map Location: ] [Description: 205 kDa microtubule-associated protein] [Gene Type: protein-coding]","LOC656210; TcasGA2_TC012007"]
[1378,"NC_007424.3",9218997,"SNV","A","G","Homozygous",21,21,100,1,8,17,0.32,38.05,25,25,11,10,null,1,1,"no","G/G","No",1,83.89,"XP_015839066.1:c.46889T>C","XP_015839066.1:p.Leu15630Pro","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1379,"NC_007424.3",9236761,"SNV","C","T","Homozygous",23,23,100,1,9,14,0.39,37.3,23,23,10,15,null,1,1,"no","T/T","No",1,91.55,"XP_015839066.1:c.31114G>A","XP_015839066.1:p.Gly10372Ser","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1380,"NC_007424.3",9251330,"SNV","T","A","Heterozygous",6,20,30,1,4,2,0.33,39.33,6,20,2,5,1.2,0.26,0.95,"no","A/T","No",1,33.76,"XP_015839066.1:c.18042A>T","XP_015839066.1:p.Leu6014Phe","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1381,"NC_007424.3",9257314,"SNV","A","G","Heterozygous",10,21,47.62,1,8,2,0.2,37.2,10,22,6,3,-0.74,0.12,0.2,"no","A/G","No",1,83.17,"XP_015839066.1:c.13160T>C","XP_015839066.1:p.Leu4387Ser","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1382,"NC_007424.3",9257321,"SNV","A","C","Homozygous",21,21,100,1,9,13,0.41,38.1,22,22,10,7,null,1,1,"no","C/C","No",1,83.88,"XP_015839066.1:c.13153T>G","XP_015839066.1:p.Ser4385Ala","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1383,"NC_007424.3",9262925,"SNV","T","C","Homozygous",25,25,100,1,16,15,0.48,37.76,31,31,13,14,null,1,1,"no","C/C","No",1,92.91,"XP_015839066.1:c.8728A>G","XP_015839066.1:p.Lys2910Glu","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1384,"NC_007424.3",9385160,"SNV","G","A","Heterozygous",16,21,76.19,1,11,13,0.46,36.06,24,30,7,10,1.45,0.99,1,"no","complex","No",1,200,"XP_970542.1:c.506C>T","XP_970542.1:p.Thr169Met","LOC659117",659117,null,"659117 [Gene Symbol: LOC659117] [Locus Tag: TcasGA2_TC011978] [Chromosome: LG9] [Map Location: ] [Description: ribosome biogenesis protein BRX1 homolog] [Gene Type: protein-coding]","LOC659117; TcasGA2_TC011978"]
[1385,"NC_007424.3",10964239,"SNV","G","C","Heterozygous",7,20,35,1,2,5,0.29,39.71,7,20,5,4,2.3,0.7,1,"no","C/G","No",1,47.15,"XP_015838964.1:c.[692G>C]; XP_015838967.1:c.[692G>C]; XP_015838965.1:c.[692G>C]; XP_008197974.1:c.[692G>C]; XP_015838966.1:c.[692G>C]","XP_015838964.1:p.[Gly231Ala]; XP_015838967.1:p.[Gly231Ala]; XP_015838965.1:p.[Gly231Ala]; XP_008197974.1:p.[Gly231Ala]; XP_015838966.1:p.[Gly231Ala]","LOC655795, LOC656624","655795 , 656624","5-hydroxytryptamine receptor","655795 [Gene Symbol: LOC655795] [Locus Tag: TcasGA2_TC011960] [Chromosome: LG9] [Map Location: ] [Description: 5-hydroxytryptamine receptor] [Gene Type: protein-coding] || 656624 [Gene Symbol: LOC656624] [Locus Tag: TcasGA2_TC012521] [Chromosome: LG9] [Map Location: ] [Description: protocadherin-like wing polarity protein stan] [Gene Type: protein-coding]","TcasGA2_TC011960; LOC655795 || TcasGA2_TC012521; LOC656624; stan"]
[1386,"NC_007424.3",11065002,"SNV","A","G","Homozygous",31,31,100,1,16,19,0.46,38.29,35,35,14,20,null,1,1,"no","G/G","No",1,113.98,"XP_008197936.1:c.[2191A>G]; XP_015838969.1:c.[1825A>G]; XP_015838968.1:c.[2236A>G]","XP_008197936.1:p.[Thr731Ala]; XP_015838969.1:p.[Thr609Ala]; XP_015838968.1:p.[Thr746Ala]","LOC658305",658305,null,"658305 [Gene Symbol: LOC658305] [Locus Tag: TcasGA2_TC012537] [Chromosome: LG9] [Map Location: ] [Description: mutS protein homolog 5] [Gene Type: protein-coding]","TcasGA2_TC012537; LOC658305"]
[1387,"NC_007424.3",11125112,"SNV","C","G","Heterozygous",7,23,30.43,1,1,7,0.12,34.86,8,25,1,1,-1.37,0.06,0.3,"no","C/G","No",1,38.56,"XP_975968.1:c.328G>C","XP_975968.1:p.Asp110His","LOC657855",657855,null,"657855 [Gene Symbol: LOC657855] [Locus Tag: TcasGA2_TC011946] [Chromosome: LG9] [Map Location: ] [Description: ribonuclease Oy] [Gene Type: protein-coding]","LOC657855; TcasGA2_TC011946"]
[1388,"NC_007424.3","11183463..11183464","MNV","GG","AC","Heterozygous",8,24,33.33,1,5,5,0.5,36.25,10,34,5,6,0.7,0.82,1,"no","complex","No",1,200,"XP_008197991.1:c.1842_1843delGGinsAC","XP_008197991.1:p.Glu615Gln","LOC659036",659036,null,"659036 [Gene Symbol: LOC659036] [Locus Tag: TcasGA2_TC012543] [Chromosome: LG9] [Map Location: ] [Description: rab3 GTPase-activating protein non-catalytic subunit] [Gene Type: protein-coding]","LOC659036; TcasGA2_TC012543"]
[1389,"NC_007424.3",11184145,"SNV","G","A","Heterozygous",6,22,27.27,1,6,2,0.25,36.83,8,24,5,5,-0.77,0.31,0.49,"no","A/G","No",1,28.27,"XP_008197991.1:c.2524G>A","XP_008197991.1:p.Val842Ile","LOC659036",659036,null,"659036 [Gene Symbol: LOC659036] [Locus Tag: TcasGA2_TC012543] [Chromosome: LG9] [Map Location: ] [Description: rab3 GTPase-activating protein non-catalytic subunit] [Gene Type: protein-coding]","LOC659036; TcasGA2_TC012543"]
[1390,"NC_007424.3",11234527,"SNV","G","T","Homozygous",22,22,100,1,18,8,0.31,37.86,26,26,10,12,null,1,1,"no","T/T","No",1,88.54,"XP_001811274.1:c.688C>A","XP_001811274.1:p.Gln230Lys","LOC100141517",100141517,null,"100141517 [Gene Symbol: LOC100141517] [Locus Tag: TcasGA2_TC011942] [Chromosome: LG9] [Map Location: ] [Description: 4F2 cell-surface antigen heavy chain] [Gene Type: protein-coding]","LOC100141517; TcasGA2_TC011942"]
[1391,"NC_007424.3",11234559,"SNV","C","T","Heterozygous",6,24,25,0.99,6,0,0,35.83,6,30,4,4,1.87,0.68,0.24,"no","C/T","No",1,22.7,"XP_001811274.1:c.656G>A","XP_001811274.1:p.Gly219Asp","LOC100141517",100141517,null,"100141517 [Gene Symbol: LOC100141517] [Locus Tag: TcasGA2_TC011942] [Chromosome: LG9] [Map Location: ] [Description: 4F2 cell-surface antigen heavy chain] [Gene Type: protein-coding]","LOC100141517; TcasGA2_TC011942"]
[1392,"NC_007424.3",11288060,"SNV","A","T","Homozygous",20,20,100,1,7,17,0.29,36.05,24,24,8,10,null,1,1,"no","T/T","No",1,82.52,"XP_015839051.1:c.[1141A>T]; XP_015839050.1:c.[1141A>T]","XP_015839051.1:p.[Ser381Cys]; XP_015839050.1:p.[Ser381Cys]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1393,"NC_007424.3",11310645,"SNV","G","T","Homozygous",23,23,100,1,17,8,0.32,37.7,25,25,8,14,null,1,1,"no","T/T","No",1,91.54,"XP_015839051.1:c.[10307G>T]; XP_015839050.1:c.[10310G>T]","XP_015839051.1:p.[Trp3436Leu]; XP_015839050.1:p.[Trp3437Leu]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1394,"NC_007424.3",11310723,"SNV","C","T","Homozygous",19,23,82.61,0.58,17,5,0.23,34.68,22,26,6,15,0.53,0.9,0.99,"no","C/T","No",1,3.82,"XP_015839050.1:c.[10388C>T]; XP_015839051.1:c.[10385C>T]","XP_015839050.1:p.[Pro3463Leu]; XP_015839051.1:p.[Pro3462Leu]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1395,"NC_007424.3","11310730..11310731","MNV","GG","CA","Homozygous",22,26,84.62,1,17,7,0.29,35.16,24,28,10,16,1.35,0.98,0.99,"no","CA/CA","No",1,200,"XP_015839050.1:c.[10395_10396delGGinsCA]; XP_015839051.1:c.[10392_10393delGGinsCA]","XP_015839050.1:p.[Ala3466Thr]; XP_015839051.1:p.[Ala3465Thr]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1396,"NC_007424.3",11310893,"SNV","G","A","Heterozygous",19,24,79.17,0.93,2,19,0.1,37.32,21,26,6,9,-1.07,0.95,0.99,"no","A/G","No",1,11.73,"XP_015839050.1:c.[10558G>A]; XP_015839051.1:c.[10555G>A]","XP_015839050.1:p.[Glu3520Lys]; XP_015839051.1:p.[Glu3519Lys]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1397,"NC_007424.3",11366665,"SNV","A","T","Heterozygous",16,27,59.26,1,12,4,0.25,37.88,16,27,5,15,-1.85,0.72,0.82,"no","A/T","No",1,78.11,"XP_971487.1:c.8A>T","XP_971487.1:p.Gln3Leu","LOC660134",660134,null,"660134 [Gene Symbol: LOC660134] [Locus Tag: TcasGA2_TC012553] [Chromosome: LG9] [Map Location: ] [Description: translation initiation factor eIF-2B subunit gamma] [Gene Type: protein-coding]","TcasGA2_TC012553; LOC660134"]
[1398,"NC_007424.3",11367059,"SNV","G","A","Heterozygous",6,26,23.08,0.98,3,3,0.5,38.67,6,26,3,4,1,0.04,0.94,"no","A/G","No",1,17.11,"XP_971487.1:c.356G>A","XP_971487.1:p.Ser119Asn","LOC660134",660134,null,"660134 [Gene Symbol: LOC660134] [Locus Tag: TcasGA2_TC012553] [Chromosome: LG9] [Map Location: ] [Description: translation initiation factor eIF-2B subunit gamma] [Gene Type: protein-coding]","TcasGA2_TC012553; LOC660134"]
[1399,"NC_007424.3",11420224,"SNV","A","T","Homozygous",21,21,100,1,21,0,0,39.1,21,21,9,11,null,1,1,"no","T/T","No",1,85.52,"XP_015839304.1:c.[4159T>A]; XP_015839300.1:c.[4351T>A]; XP_015839301.1:c.[4348T>A]; XP_015839303.1:c.[4309T>A]; XP_015839302.1:c.[4315T>A]","XP_015839304.1:p.[Cys1387Ser]; XP_015839300.1:p.[Cys1451Ser]; XP_015839301.1:p.[Cys1450Ser]; XP_015839303.1:p.[Cys1437Ser]; XP_015839302.1:p.[Cys1439Ser]","LOC660562",660562,null,"660562 [Gene Symbol: LOC660562] [Locus Tag: TcasGA2_TC011933] [Chromosome: LG9] [Map Location: ] [Description: rho GTPase-activating protein 100F] [Gene Type: protein-coding]","LOC660562; TcasGA2_TC011933"]
[1400,"NC_007424.3",11487431,"SNV","T","A","Heterozygous",7,21,33.33,1,0,7,0,39.57,7,21,1,1,0.56,0.06,0.22,"no","A/T","No",1,43.74,"XP_008198012.1:c.57T>A","XP_008198012.1:p.Phe19Leu","LOC103314260",103314260,null,"103314260 [Gene Symbol: LOC103314260] [Locus Tag: TcasGA2_TC012558] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC012558; LOC103314260"]
[1401,"NC_007424.3",11509526,"SNV","G","T","Heterozygous",6,26,23.08,0.94,5,6,0.45,35.5,11,36,2,2,-0.91,0.27,1,"no","G/T","No",1,12.53,"XP_972498.1:c.2225C>A","XP_972498.1:p.Ser742*","LOC661230",661230,null,"661230 [Gene Symbol: LOC661230] [Locus Tag: TcasGA2_TC011929] [Chromosome: LG9] [Map Location: ] [Description: histone H2A deubiquitinase MYSM1] [Gene Type: protein-coding]","LOC661230; TcasGA2_TC011929"]
[1402,"NC_007424.3",11589596,"SNV","G","T","Heterozygous",7,27,25.93,0.99,7,0,0,34.71,7,30,1,5,-0.08,0.17,0.34,"no","G/T","No",1,22.29,"XP_976392.1:c.[561C>A]; XP_008198034.1:c.[172+4558C>A]","XP_976392.1:p.Tyr187*","LOC661613, LOC661658","661613 , 661658",null,"661613 [Gene Symbol: LOC661613] [Locus Tag: TcasGA2_TC011926] [Chromosome: LG9] [Map Location: ] [Description: rap guanine nucleotide exchange factor 4] [Gene Type: protein-coding] || 661658 [Gene Symbol: LOC661658] [Locus Tag: TcasGA2_TC011925] [Chromosome: LG9] [Map Location: ] [Description: cuticle protein 16.5, isoform A] [Gene Type: protein-coding]","LOC661613; TcasGA2_TC011926 || TcasGA2_TC011925; LOC661658"]
[1403,"NC_007424.3",11645479,"SNV","G","C","Homozygous",27,27,100,1,10,18,0.36,37.41,28,28,10,16,null,1,1,"no","C/C","No",1,101.94,"XP_973346.2:c.1477C>G","XP_973346.2:p.Arg493Gly","LOC662136",662136,null,"662136 [Gene Symbol: LOC662136] [Locus Tag: TcasGA2_TC011920] [Chromosome: LG9] [Map Location: ] [Description: phosphoacetylglucosamine mutase] [Gene Type: protein-coding]","TcasGA2_TC011920; LOC662136"]
[1404,"NC_007424.3",11660784,"SNV","G","A","Homozygous",20,20,100,1,15,13,0.46,37.1,28,28,11,11,null,1,1,"no","A/A","No",1,82.49,"XP_001813274.1:c.184G>A","XP_001813274.1:p.Gly62Ser","LOC100142149",100142149,null,"100142149 [Gene Symbol: LOC100142149] [Locus Tag: TcasGA2_TC012579] [Chromosome: LG9] [Map Location: ] [Description: caspase Dronc] [Gene Type: protein-coding]","TcasGA2_TC012579; LOC100142149"]
[1405,"NC_007424.3",11845055,"SNV","C","A","Homozygous",22,22,100,1,16,10,0.38,37.18,26,26,5,11,null,1,1,"no","A/A","No",1,88.51,"XP_974163.1:c.867G>T","XP_974163.1:p.Glu289Asp","LOC663003",663003,null,"663003 [Gene Symbol: LOC663003] [Locus Tag: TcasGA2_TC011905] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663003] [Gene Type: protein-coding]","TcasGA2_TC011905; LOC663003"]
[1406,"NC_007424.3",11955436,"SNV","A","G","Homozygous",37,37,100,1,11,32,0.26,35.59,43,43,10,16,null,1,1,"no","G/G","No",1,132.05,"XP_974291.2:c.[2720T>C]; XP_008198080.1:c.[2942T>C]","XP_974291.2:p.[Leu907Pro]; XP_008198080.1:p.[Leu981Pro]","LOC663138",663138,null,"663138 [Gene Symbol: LOC663138] [Locus Tag: TcasGA2_TC030617] [Chromosome: LG9] [Map Location: ] [Description: phosphatidylinositide phosphatase SAC2] [Gene Type: protein-coding]","TcasGA2_TC030617; LOC663138"]
[1407,"NC_007424.3","11966853..11966854","MNV","AC","TG","Homozygous",21,21,100,1,4,21,0.16,38.29,25,25,7,7,null,1,1,"no","TG/TG","No",1,200,"XP_008198081.1:c.1338_1339delACinsTG","XP_008198081.1:p.Pro447Ala","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1408,"NC_007424.3",12137539,"SNV","G","A","Heterozygous",13,21,61.9,1,13,0,0,39.38,13,21,1,12,3.77,0.05,1,"no","A/G","No",1,57.9,"XP_974391.1:c.634G>A","XP_974391.1:p.Val212Ile","LOC663241",663241,null,"663241 [Gene Symbol: LOC663241] [Locus Tag: TcasGA2_TC012611] [Chromosome: LG9] [Map Location: ] [Description: dynein assembly factor 3, axonemal homolog] [Gene Type: protein-coding]","TcasGA2_TC012611; LOC663241"]
[1409,"NC_007424.3",12137887,"SNV","A","T","Heterozygous",11,34,32.35,1,5,6,0.45,34,11,38,4,8,-2.28,0.56,1,"no","A/T","No",1,58.63,"XP_974391.1:c.982A>T","XP_974391.1:p.Thr328Ser","LOC663241",663241,null,"663241 [Gene Symbol: LOC663241] [Locus Tag: TcasGA2_TC012611] [Chromosome: LG9] [Map Location: ] [Description: dynein assembly factor 3, axonemal homolog] [Gene Type: protein-coding]","TcasGA2_TC012611; LOC663241"]
[1410,"NC_007424.3",12137896,"SNV","A","G","Heterozygous",16,23,69.57,1,8,9,0.47,38.81,17,24,5,12,1.17,0.95,1,"no","A/G","No",1,38.16,"XP_974391.1:c.991A>G","XP_974391.1:p.Thr331Ala","LOC663241",663241,null,"663241 [Gene Symbol: LOC663241] [Locus Tag: TcasGA2_TC012611] [Chromosome: LG9] [Map Location: ] [Description: dynein assembly factor 3, axonemal homolog] [Gene Type: protein-coding]","TcasGA2_TC012611; LOC663241"]
[1411,"NC_007424.3",12138050,"SNV","T","G","Heterozygous",15,25,60,1,10,7,0.41,36.87,17,27,5,10,-0.92,0.31,0.99,"no","G/T","No",1,66.13,"XP_974391.1:c.1145T>G","XP_974391.1:p.Leu382Trp","LOC663241",663241,null,"663241 [Gene Symbol: LOC663241] [Locus Tag: TcasGA2_TC012611] [Chromosome: LG9] [Map Location: ] [Description: dynein assembly factor 3, axonemal homolog] [Gene Type: protein-coding]","TcasGA2_TC012611; LOC663241"]
[1412,"NC_007424.3",12138059,"SNV","G","A","Heterozygous",16,22,72.73,1,9,7,0.44,37.25,16,22,6,10,-2.25,0.63,0.82,"no","A/G","No",1,29.76,"XP_974391.1:c.1154G>A","XP_974391.1:p.Arg385His","LOC663241",663241,null,"663241 [Gene Symbol: LOC663241] [Locus Tag: TcasGA2_TC012611] [Chromosome: LG9] [Map Location: ] [Description: dynein assembly factor 3, axonemal homolog] [Gene Type: protein-coding]","TcasGA2_TC012611; LOC663241"]
[1413,"NC_007424.3",12138070,"SNV","A","G","Heterozygous",17,23,73.91,1,8,9,0.47,37.94,17,23,7,10,-2.31,0.66,0.89,"no","A/G","No",1,25.43,"XP_974391.1:c.1165A>G","XP_974391.1:p.Lys389Glu","LOC663241",663241,null,"663241 [Gene Symbol: LOC663241] [Locus Tag: TcasGA2_TC012611] [Chromosome: LG9] [Map Location: ] [Description: dynein assembly factor 3, axonemal homolog] [Gene Type: protein-coding]","TcasGA2_TC012611; LOC663241"]
[1414,"NC_007424.3","12180271..12180272","MNV","CC","GT","Homozygous",27,27,100,1,22,16,0.42,35.42,38,38,14,21,null,1,1,"no","GT/GT","No",1,200,"XP_015839034.1:c.[1313_1314delCCinsGT]; XP_008198097.1:c.[1313_1314delCCinsGT]; XP_008198094.1:c.[1229_1230delCCinsGT]; XP_015839033.1:c.[1265_1266delCCinsGT]; XP_008198093.1:c.[1313_1314delCCinsGT]; XP_008198098.1:c.[968_969delCCinsGT]; XP_008198092.1:c.[1313_1314delCCinsGT]; XP_008198095.1:c.[1313_1314delCCinsGT]; XP_008198096.1:c.[1313_1314delCCinsGT]","XP_015839034.1:p.[Thr438Ser]; XP_008198097.1:p.[Thr438Ser]; XP_008198094.1:p.[Thr410Ser]; XP_015839033.1:p.[Thr422Ser]; XP_008198093.1:p.[Thr438Ser]; XP_008198098.1:p.[Thr323Ser]; XP_008198092.1:p.[Thr438Ser]; XP_008198095.1:p.[Thr438Ser]; XP_008198096.1:p.[Thr438Ser]","LOC663411",663411,null,"663411 [Gene Symbol: LOC663411] [Locus Tag: TcasGA2_TC012615] [Chromosome: LG9] [Map Location: ] [Description: rho GTPase-activating protein 21-B] [Gene Type: protein-coding]","TcasGA2_TC012615; LOC663411"]
[1415,"NC_007424.3",12188648,"SNV","G","T","Heterozygous",5,20,25,0.98,1,5,0.17,36,6,21,1,4,-1.79,0.13,0.92,"no","G/T","No",1,16.32,"XP_008198096.1:c.[5295G>T]; XP_008198092.1:c.[5421G>T]; XP_008198094.1:c.[5337G>T]; XP_008198097.1:c.[5172G>T]; XP_008198093.1:c.[5361G>T]; XP_008198095.1:c.[5334G>T]; XP_015839033.1:c.[5373G>T]; XP_008198098.1:c.[5076G>T]","XP_008198096.1:p.[Lys1765Asn]; XP_008198092.1:p.[Lys1807Asn]; XP_008198094.1:p.[Lys1779Asn]; XP_008198097.1:p.[Lys1724Asn]; XP_008198093.1:p.[Lys1787Asn]; XP_008198095.1:p.[Lys1778Asn]; XP_015839033.1:p.[Lys1791Asn]; XP_008198098.1:p.[Lys1692Asn]","LOC663411",663411,null,"663411 [Gene Symbol: LOC663411] [Locus Tag: TcasGA2_TC012615] [Chromosome: LG9] [Map Location: ] [Description: rho GTPase-activating protein 21-B] [Gene Type: protein-coding]","TcasGA2_TC012615; LOC663411"]
[1416,"NC_007424.3",12193501,"SNV","G","A","Homozygous",20,20,100,1,7,17,0.29,37.85,24,24,8,9,null,1,1,"no","A/A","No",1,82.49,"XP_008198103.1:c.[209G>A]; XP_008198101.1:c.[209G>A]; XP_015839035.1:c.[209G>A]","XP_008198103.1:p.[Ser70Asn]; XP_008198101.1:p.[Ser70Asn]; XP_015839035.1:p.[Ser70Asn]","LOC663427",663427,null,"663427 [Gene Symbol: LOC663427] [Locus Tag: TcasGA2_TC012616] [Chromosome: LG9] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase N2] [Gene Type: protein-coding]","LOC663427; TcasGA2_TC012616"]
[1417,"NC_007424.3",12250536,"SNV","A","T","Heterozygous",10,20,50,1,6,4,0.4,40.4,10,20,5,4,0.38,0.81,0.96,"no","A/T","No",1,81.86,"XP_974847.2:c.[1852T>A]; XP_015839057.1:c.[1849T>A]","XP_974847.2:p.[Tyr618Asn]; XP_015839057.1:p.[Tyr617Asn]","LOC663720",663720,null,"663720 [Gene Symbol: LOC663720] [Locus Tag: TcasGA2_TC034408] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663720] [Gene Type: protein-coding]","TcasGA2_TC034408; LOC663720"]
[1418,"NC_007424.3",12273887,"SNV","C","A","Homozygous",20,20,100,1,7,15,0.32,36,22,22,10,14,null,1,1,"no","A/A","No",1,82.49,"XP_015838986.1:c.[331C>A]; XP_015838985.1:c.[331C>A]; XP_015838987.1:c.[76C>A]","XP_015838986.1:p.[Gln111Lys]; XP_015838985.1:p.[Gln111Lys]; XP_015838987.1:p.[Gln26Lys]","LOC107398653",107398653,null,"107398653 [Gene Symbol: LOC107398653] [Locus Tag: TcasGA2_TC012629] [Chromosome: LG9] [Map Location: ] [Description: odorant receptor 49a-like] [Gene Type: protein-coding]","TcasGA2_TC012629; LOC107398653"]
[1419,"NC_007424.3",12307726,"SNV","A","G","Homozygous",20,20,100,1,20,4,0.17,38.1,24,24,9,17,null,1,1,"no","G/G","No",1,80.88,"XP_008197944.1:c.311A>G","XP_008197944.1:p.Lys104Arg","LOC103314254",103314254,null,"103314254 [Gene Symbol: LOC103314254] [Locus Tag: TcasGA2_TC012636] [Chromosome: LG9] [Map Location: ] [Description: odorant receptor 76] [Gene Type: protein-coding]","or26; TcasGA2_TC012636; Or76; LOC103314254"]
[1420,"NC_007424.3",12359071,"SNV","G","C","Homozygous",22,22,100,1,19,11,0.37,35.41,30,30,9,11,null,1,1,"no","C/C","No",1,86.9,"XP_008198170.1:c.[862C>G]; XP_015839061.1:c.[144+28047G>C]; XP_015839062.1:c.[144+28047G>C]","XP_008198170.1:p.Pro288Ala","LOC655549, LOC100141926","655549 , 100141926",null,"655549 [Gene Symbol: LOC655549] [Locus Tag: TcasGA2_TC012639] [Chromosome: LG9] [Map Location: ] [Description: nitric oxide synthase, salivary gland] [Gene Type: protein-coding] || 100141926 [Gene Symbol: LOC100141926] [Locus Tag: TcasGA2_TC011871] [Chromosome: LG9] [Map Location: ] [Description: galectin-4] [Gene Type: protein-coding]","LOC655549; TcasGA2_TC012639 || LOC100141926; TcasGA2_TC011871"]
[1421,"NC_007424.3",12531339,"SNV","C","T","Heterozygous",12,30,40,1,12,2,0.14,36.75,14,34,4,9,-0.13,0.03,0.59,"no","C/T","No",1,82.35,"XP_968849.1:c.1082G>A","XP_968849.1:p.Gly361Asp","LOC657517, LOC657288","657517 , 657288",null,"657517 [Gene Symbol: LOC657517] [Locus Tag: TcasGA2_TC012652] [Chromosome: LG9] [Map Location: ] [Description: rho guanine nucleotide exchange factor 10] [Gene Type: protein-coding] || 657288 [Gene Symbol: LOC657288] [Locus Tag: TcasGA2_TC011855] [Chromosome: LG9] [Map Location: ] [Description: serine--pyruvate aminotransferase] [Gene Type: protein-coding]","LOC657517; TcasGA2_TC012652 || LOC657288; TcasGA2_TC011855"]
[1422,"NC_007424.3",12595264,"SNV","T","G","Homozygous",28,28,100,1,17,19,0.47,35.93,36,36,11,12,null,1,1,"no","G/G","No",1,104.96,"XP_969574.1:c.[1032A>C]; XP_008198196.1:c.[1032A>C]","XP_969574.1:p.[Leu344Phe]; XP_008198196.1:p.[Leu344Phe]","LOC658068",658068,null,"658068 [Gene Symbol: LOC658068] [Locus Tag: TcasGA2_TC011849] [Chromosome: LG9] [Map Location: ] [Description: sterol O-acyltransferase 1] [Gene Type: protein-coding]","LOC658068; TcasGA2_TC011849"]
[1423,"NC_007424.3",12650860,"SNV","C","A","Heterozygous",5,21,23.81,0.96,0,5,0,40.8,5,26,2,1,2.44,0.28,0.51,"no","A/C","No",1,13.72,"XP_970005.1:c.628C>A","XP_970005.1:p.His210Asn","LOC658530",658530,null,"658530 [Gene Symbol: LOC658530] [Locus Tag: TcasGA2_TC012659] [Chromosome: LG9] [Map Location: ] [Description: pre-mRNA-processing factor 19] [Gene Type: protein-coding]","LOC658530; TcasGA2_TC012659"]
[1424,"NC_007424.3",12658010,"SNV","A","T","Heterozygous",18,23,78.26,0.95,4,18,0.18,36.33,22,28,8,8,0.93,0.39,0.71,"no","A/T","No",1,12.88,"XP_970077.2:c.1353T>A","XP_970077.2:p.Asp451Glu","LOC658608",658608,null,"658608 [Gene Symbol: LOC658608] [Locus Tag: TcasGA2_TC011844] [Chromosome: LG9] [Map Location: ] [Description: replication protein A 70 kDa DNA-binding subunit] [Gene Type: protein-coding]","LOC658608; TcasGA2_TC011844"]
[1425,"NC_007424.3",12684139,"SNV","A","G","Homozygous",22,22,100,1,6,19,0.24,39,25,25,9,13,null,1,1,"no","G/G","No",1,86.9,"XP_008198201.1:c.[86A>G]; XP_970620.1:c.[86A>G]","XP_008198201.1:p.[Asp29Gly]; XP_970620.1:p.[Asp29Gly]","LOC659200",659200,null,"659200 [Gene Symbol: LOC659200] [Locus Tag: TcasGA2_TC012664] [Chromosome: LG9] [Map Location: ] [Description: ran-binding protein 3] [Gene Type: protein-coding]","TcasGA2_TC012664; LOC659200"]
[1426,"NC_007424.3",12809225,"SNV","G","C","Heterozygous",12,21,57.14,1,0,12,0,37.67,12,21,4,5,-1.31,0.4,1,"no","C/G","No",1,69.67,"XP_015839087.1:c.[1505+5467C>G]; XP_971240.2:c.[2927G>C]; XP_015839078.1:c.[2927G>C]; XP_008198218.2:c.[1604+5467C>G]; XP_008198216.1:c.[2921G>C]","XP_971240.2:p.[Cys976Ser]; XP_015839078.1:p.[Cys976Ser]; XP_008198216.1:p.[Cys974Ser]","LOC659943, LOC659880","659943 , 659880",null,"659943 [Gene Symbol: LOC659943] [Locus Tag: TcasGA2_TC011836] [Chromosome: LG9] [Map Location: ] [Description: poly(A)-specific ribonuclease PARN-like domain-containing protein 1] [Gene Type: protein-coding] || 659880 [Gene Symbol: LOC659880] [Locus Tag: TcasGA2_TC012669] [Chromosome: LG9] [Map Location: ] [Description: trafficking protein particle complex subunit 11] [Gene Type: protein-coding]","TcasGA2_TC011836; LOC659943 || LOC659880; TcasGA2_TC012669"]
[1427,"NC_007424.3",13049203,"SNV","G","A","Homozygous",21,21,100,1,15,7,0.32,38,22,22,10,12,null,1,1,"no","A/A","No",1,85.5,"XP_008198233.1:c.583C>T","XP_008198233.1:p.Leu195Phe","LOC660503",660503,null,"660503 [Gene Symbol: LOC660503] [Locus Tag: TcasGA2_TC011830] [Chromosome: LG9] [Map Location: ] [Description: RRP12-like protein] [Gene Type: protein-coding]","LOC660503; TcasGA2_TC011830"]
[1428,"NC_007424.3",13181440,"SNV","A","G","Homozygous",20,20,100,1,9,11,0.45,35.9,20,20,10,11,null,1,1,"no","G/G","No",1,80.87,"XP_015839075.1:c.3821A>G","XP_015839075.1:p.Glu1274Gly","LOC103314298",103314298,null,"103314298 [Gene Symbol: LOC103314298] [Locus Tag: TcasGA2_TC012689] [Chromosome: LG9] [Map Location: ] [Description: rotatin] [Gene Type: protein-coding]","LOC103314298; TcasGA2_TC012689"]
[1429,"NC_007424.3",13228061,"SNV","G","A","Homozygous",32,32,100,1,11,23,0.32,34.62,34,34,10,17,null,1,1,"no","A/A","No",1,115.58,"XP_973129.2:c.[1291C>T]; XP_008198256.2:c.[979C>T]; XP_008198255.2:c.[1162C>T]","XP_973129.2:p.[Pro431Ser]; XP_008198256.2:p.[Pro327Ser]; XP_008198255.2:p.[Pro388Ser]","LOC661905",661905,null,"661905 [Gene Symbol: LOC661905] [Locus Tag: TcasGA2_TC011813] [Chromosome: LG9] [Map Location: ] [Description: serine/arginine repetitive matrix protein 2] [Gene Type: protein-coding]","LOC661905; TcasGA2_TC011813"]
[1430,"NC_007424.3",13328268,"SNV","T","C","Homozygous",20,20,100,1,11,9,0.45,38.3,20,20,8,12,null,1,1,"no","C/C","No",1,80.88,"XP_008198257.1:c.575A>G","XP_008198257.1:p.Lys192Arg","LOC103314318",103314318,null,"103314318 [Gene Symbol: LOC103314318] [Locus Tag: TcasGA2_TC011807] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314318] [Gene Type: protein-coding]","LOC103314318; TcasGA2_TC011807"]
[1431,"NC_007424.3",13363554,"SNV","G","A","Homozygous",29,29,100,1,19,19,0.5,37.59,38,38,10,16,null,1,1,"no","A/A","No",1,106.56,"XP_008198267.1:c.[1745C>T]; XP_008198266.1:c.[1775C>T]; XP_008198265.1:c.[1949C>T]","XP_008198267.1:p.[Thr582Ile]; XP_008198266.1:p.[Thr592Ile]; XP_008198265.1:p.[Thr650Ile]","LOC662355",662355,null,"662355 [Gene Symbol: LOC662355] [Locus Tag: TcasGA2_TC011802] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC662355; TcasGA2_TC011802"]
[1432,"NC_007424.3",13364323,"SNV","C","T","Homozygous",23,23,100,1,12,19,0.39,37.09,31,31,7,12,null,1,1,"no","T/T","No",1,91.55,"XP_008198266.1:c.[1006G>A]; XP_008198265.1:c.[1180G>A]; XP_008198267.1:c.[976G>A]","XP_008198266.1:p.[Val336Ile]; XP_008198265.1:p.[Val394Ile]; XP_008198267.1:p.[Val326Ile]","LOC662355",662355,null,"662355 [Gene Symbol: LOC662355] [Locus Tag: TcasGA2_TC011802] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC662355; TcasGA2_TC011802"]
[1433,"NC_007424.3",13388296,"SNV","G","T","Homozygous",24,24,100,1,6,18,0.25,38.92,24,24,4,8,null,1,1,"no","T/T","No",1,94.55,"XP_973581.1:c.159C>A","XP_973581.1:p.His53Gln","LOC662390",662390,null,"662390 [Gene Symbol: LOC662390] [Locus Tag: TcasGA2_TC011801] [Chromosome: LG9] [Map Location: ] [Description: peroxisomal membrane protein 2] [Gene Type: protein-coding]","LOC662390; TcasGA2_TC011801"]
[1434,"NC_007424.3",13389123,"SNV","G","C","Homozygous",21,21,100,1,15,13,0.46,37.67,28,28,11,15,null,1,1,"no","C/C","No",1,83.89,"XP_015839198.1:c.2800C>G","XP_015839198.1:p.Arg934Gly","LOC100142393",100142393,null,"100142393 [Gene Symbol: LOC100142393] [Locus Tag: TcasGA2_TC011800] [Chromosome: LG9] [Map Location: ] [Description: cystic fibrosis transmembrane conductance regulator] [Gene Type: protein-coding]","LOC100142393; TcasGA2_TC011800"]
[1435,"NC_007424.3",13405879,"SNV","A","T","Homozygous",21,21,100,1,8,15,0.35,38.48,23,23,9,12,null,1,1,"no","T/T","No",1,85.53,"XP_973747.1:c.124T>A","XP_973747.1:p.Ser42Thr","LOC662564",662564,null,"662564 [Gene Symbol: LOC662564] [Locus Tag: TcasGA2_TC011798] [Chromosome: LG9] [Map Location: ] [Description: altered disjunction] [Gene Type: protein-coding]","TcasGA2_TC011798; ald; LOC662564"]
[1436,"NC_007424.3",13406613,"SNV","G","T","Homozygous",25,25,100,1,14,12,0.46,38.16,26,26,8,14,null,1,1,"no","T/T","No",1,97.56,"XP_008198271.1:c.[201G>T]; XP_008198270.1:c.[246G>T]","XP_008198271.1:p.[Arg67Ser]; XP_008198270.1:p.[Arg82Ser]","LOC103314323",103314323,null,"103314323 [Gene Symbol: LOC103314323] [Locus Tag: TcasGA2_TC034436] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314323] [Gene Type: protein-coding]","LOC103314323; TcasGA2_TC034436"]
[1437,"NC_007424.3",13429868,"SNV","C","A","Homozygous",24,24,100,1,15,14,0.48,37.58,29,29,10,14,null,1,1,"no","A/A","No",1,94.53,"XP_008198161.2:c.[4316C>A]; XP_015839327.1:c.[4271C>A]","XP_008198161.2:p.[Pro1439His]; XP_015839327.1:p.[Pro1424His]","LOC103314300",103314300,null,"103314300 [Gene Symbol: LOC103314300] [Locus Tag: TcasGA2_TC034437] [Chromosome: LG9] [Map Location: ] [Description: polycystic kidney disease protein 1-like 2] [Gene Type: protein-coding]","TcasGA2_TC034437; LOC103314300"]
[1438,"NC_007424.3",13471699,"SNV","G","A","Homozygous",28,28,100,1,23,13,0.36,36.89,36,36,12,17,null,1,1,"no","A/A","No",1,106.56,"XP_967143.1:c.[188C>T]; XP_008198279.1:c.[34-311C>T]","XP_967143.1:p.Pro63Leu","LOC663060, LOC661404","663060 , 661404",null,"663060 [Gene Symbol: LOC663060] [Locus Tag: TcasGA2_TC012706] [Chromosome: LG9] [Map Location: ] [Description: origin recognition complex subunit 5] [Gene Type: protein-coding] || 661404 [Gene Symbol: LOC661404] [Locus Tag: TcasGA2_TC011791] [Chromosome: LG9] [Map Location: ] [Description: annexin B9] [Gene Type: protein-coding]","TcasGA2_TC012706; LOC663060 || LOC661404; TcasGA2_TC011791"]
[1439,"NC_007424.3",13525613,"SNV","A","G","Homozygous",20,20,100,1,4,17,0.19,36.2,21,21,10,13,null,1,1,"no","G/G","No",1,80.88,"XP_008198289.1:c.370A>G","XP_008198289.1:p.Thr124Ala","LOC661617",661617,null,"661617 [Gene Symbol: LOC661617] [Locus Tag: TcasGA2_TC012708] [Chromosome: LG9] [Map Location: ] [Description: 60S ribosomal protein L23a] [Gene Type: protein-coding]","TcasGA2_TC012708; LOC661617"]
[1440,"NC_007424.3",13552040,"SNV","A","G","Homozygous",21,21,100,1,21,0,0,37.24,21,21,4,12,null,1,1,"no","G/G","No",1,80.87,"XP_015838960.1:c.3724A>G","XP_015838960.1:p.Thr1242Ala","LOC663281",663281,null,"663281 [Gene Symbol: LOC663281] [Locus Tag: TcasGA2_TC012710] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663281] [Gene Type: protein-coding]","LOC663281; TcasGA2_TC012710"]
[1441,"NC_007424.3",13616771,"SNV","T","G","Homozygous",24,24,100,1,15,11,0.42,37.58,26,26,9,16,null,1,1,"no","G/G","No",1,92.92,"XP_015839119.1:c.[2371T>G]; XP_008198294.1:c.[2224T>G]; XP_974469.1:c.[2224T>G]; XP_015839120.1:c.[2224T>G]","XP_015839119.1:p.[Leu791Val]; XP_008198294.1:p.[Leu742Val]; XP_974469.1:p.[Leu742Val]; XP_015839120.1:p.[Leu742Val]","LOC663321",663321,null,"663321 [Gene Symbol: LOC663321] [Locus Tag: TcasGA2_TC012717] [Chromosome: LG9] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC663321; TcasGA2_TC012717"]
[1442,"NC_007424.3",13700753,"SNV","G","A","Heterozygous",12,30,40,1,12,2,0.14,38.92,14,39,2,10,1.8,0.41,0.81,"no","A/G","No",1,52.49,"XP_015839121.1:c.[1208G>A]; XP_008198297.1:c.[1208G>A]; XP_015839122.1:c.[1208G>A]; XP_008198296.1:c.[1343G>A]; XP_008198298.1:c.[1208G>A]","XP_015839121.1:p.[Ser403Asn]; XP_008198297.1:p.[Ser403Asn]; XP_015839122.1:p.[Ser403Asn]; XP_008198296.1:p.[Ser448Asn]; XP_008198298.1:p.[Ser403Asn]","LOC663375",663375,null,"663375 [Gene Symbol: LOC663375] [Locus Tag: TcasGA2_TC012723] [Chromosome: LG9] [Map Location: ] [Description: TOX high mobility group box family member 4] [Gene Type: protein-coding]","LOC663375; TcasGA2_TC012723"]
[1443,"NC_007424.3","13707876..13707877","MNV","TC","GG","Homozygous",21,21,100,1,14,14,0.5,38.65,28,28,12,15,null,1,1,"no","GG/GG","No",1,200,"XP_974552.1:c.16_17delTCinsGG","XP_974552.1:p.Ser6Gly","LOC663412",663412,null,"663412 [Gene Symbol: LOC663412] [Locus Tag: TcasGA2_TC012724] [Chromosome: LG9] [Map Location: ] [Description: probable rRNA-processing protein EBP2 homolog] [Gene Type: protein-coding]","LOC663412; TcasGA2_TC012724"]
[1444,"NC_007424.3",13887367,"SNV","G","A","Homozygous",21,23,91.3,1,17,6,0.26,36.38,23,25,9,16,null,1,0.98,"no","A/A","No",1,26.76,"NP_001036067.1:c.[3176G>A]; XP_008198138.1:c.[3212G>A]","NP_001036067.1:p.[Arg1059Lys]; XP_008198138.1:p.[Arg1071Lys]","Cht10",652967,"chitinase 10","652967 [Gene Symbol: Cht10] [Locus Tag: TcasGA2_TC012734] [Chromosome: LG9] [Map Location: ] [Description: chitinase 10] [Gene Type: protein-coding]","Cht10; TcCht10; TcasGA2_TC012734"]
[1445,"NC_007424.3",13892564,"SNV","C","A","Heterozygous",18,27,66.67,1,8,14,0.36,36.83,22,31,9,10,-0.05,0.81,1,"no","A/C","No",1,55.89,"XP_008198138.1:c.[7991C>A]; NP_001036067.1:c.[7955C>A]","XP_008198138.1:p.[Ala2664Glu]; NP_001036067.1:p.[Ala2652Glu]","Cht10",652967,"chitinase 10","652967 [Gene Symbol: Cht10] [Locus Tag: TcasGA2_TC012734] [Chromosome: LG9] [Map Location: ] [Description: chitinase 10] [Gene Type: protein-coding]","Cht10; TcCht10; TcasGA2_TC012734"]
[1446,"NC_007424.3",13897286,"SNV","C","T","Heterozygous",5,24,20.83,0.91,5,0,0,39.4,5,25,1,5,2.17,0.2,0.3,"no","C/T","No",1,10.28,"XP_008198309.1:c.[757G>A]; XP_008198310.1:c.[757G>A]; XP_974863.1:c.[757G>A]; XP_015839110.1:c.[757G>A]","XP_008198309.1:p.[Asp253Asn]; XP_008198310.1:p.[Asp253Asn]; XP_974863.1:p.[Asp253Asn]; XP_015839110.1:p.[Asp253Asn]","LOC663735",663735,null,"663735 [Gene Symbol: LOC663735] [Locus Tag: TcasGA2_TC011759] [Chromosome: LG9] [Map Location: ] [Description: ubiquitin thioesterase trabid] [Gene Type: protein-coding]","LOC663735; TcasGA2_TC011759"]
[1447,"NC_007424.3",13907793,"SNV","C","G","Homozygous",23,23,100,1,7,18,0.28,37.83,25,25,11,11,null,1,1,"no","G/G","No",1,89.91,"XP_008198164.1:c.1077C>G","XP_008198164.1:p.His359Gln","LOC663782",663782,null,"663782 [Gene Symbol: LOC663782] [Locus Tag: TcasGA2_TC012737] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized protein C2orf42 homolog] [Gene Type: protein-coding]","LOC663782; TcasGA2_TC012737"]
[1448,"NC_007424.3",13909436,"SNV","G","T","Homozygous",25,28,89.29,1,16,14,0.47,34.92,30,33,6,15,null,1,1,"no","T/T","No",1,23.91,"XP_974921.1:c.88C>A","XP_974921.1:p.Leu30Ile","LOC663793",663793,null,"663793 [Gene Symbol: LOC663793] [Locus Tag: TcasGA2_TC011756] [Chromosome: LG9] [Map Location: ] [Description: alpha-tocopherol transfer protein] [Gene Type: protein-coding]","LOC663793; TcasGA2_TC011756"]
[1449,"NC_007424.3",13953069,"Deletion","A","-","Heterozygous",7,22,31.82,1,0,7,0,38.57,7,22,3,4,2.15,0.11,0.66,"no","-/A","No",1,39.74,"XP_974964.1:c.433delT","XP_974964.1:p.Cys145fs","LOC663837",663837,null,"663837 [Gene Symbol: LOC663837] [Locus Tag: TcasGA2_TC011751] [Chromosome: LG9] [Map Location: ] [Description: lateral signaling target protein 2 homolog] [Gene Type: protein-coding]","LOC663837; TcasGA2_TC011751"]
[1450,"NC_007424.3",14218359,"SNV","A","G","Homozygous",20,20,100,1,0,20,0,37.8,20,20,3,6,null,1,1,"no","G/G","No",1,80.88,"XP_015839094.1:c.[3478T>C]; XP_008198324.2:c.[3475T>C]; XP_015839095.1:c.[3145T>C]","XP_015839094.1:p.[Tyr1160His]; XP_008198324.2:p.[Tyr1159His]; XP_015839095.1:p.[Tyr1049His]","LOC103314330, LOC664031","103314330 , 664031",null,"103314330 [Gene Symbol: LOC103314330] [Locus Tag: TcasGA2_TC012752] [Chromosome: LG9] [Map Location: ] [Description: coiled-coil domain-containing protein 39] [Gene Type: protein-coding] || 664031 [Gene Symbol: LOC664031] [Locus Tag: TcasGA2_TC011738] [Chromosome: LG9] [Map Location: LG9|LG9] [Description: cyclin-dependent kinase 12] [Gene Type: protein-coding]","LOC103314330; TcasGA2_TC012752 || LOC664031; TcasGA2_TC011738"]
[1451,"NC_007424.3",14221556,"SNV","G","C","Homozygous",42,42,100,1,5,37,0.12,37.43,42,42,16,24,null,1,1,"no","C/C","No",1,146.99,"XP_015839096.1:c.[1448C>G]; XP_015839094.1:c.[1448C>G]; XP_008198324.2:c.[1445C>G]; XP_015839095.1:c.[1115C>G]","XP_015839096.1:p.[Ala483Gly]; XP_015839094.1:p.[Ala483Gly]; XP_008198324.2:p.[Ala482Gly]; XP_015839095.1:p.[Ala372Gly]","LOC103314330, LOC664031","103314330 , 664031",null,"103314330 [Gene Symbol: LOC103314330] [Locus Tag: TcasGA2_TC012752] [Chromosome: LG9] [Map Location: ] [Description: coiled-coil domain-containing protein 39] [Gene Type: protein-coding] || 664031 [Gene Symbol: LOC664031] [Locus Tag: TcasGA2_TC011738] [Chromosome: LG9] [Map Location: LG9|LG9] [Description: cyclin-dependent kinase 12] [Gene Type: protein-coding]","LOC103314330; TcasGA2_TC012752 || LOC664031; TcasGA2_TC011738"]
[1452,"NC_007424.3",14246848,"SNV","G","T","Heterozygous",6,23,26.09,0.99,6,6,0.5,32.5,12,33,2,2,-2.98,0.06,0.93,"no","G/T","No",1,20.66,"XP_008198327.1:c.1818G>T","XP_008198327.1:p.Glu606Asp","LOC664089",664089,null,"664089 [Gene Symbol: LOC664089] [Locus Tag: TcasGA2_TC012753] [Chromosome: LG9] [Map Location: ] [Description: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2] [Gene Type: protein-coding]","LOC664089; TcasGA2_TC012753"]
[1453,"NC_007424.3",14247440,"SNV","G","T","Heterozygous",5,20,25,0.98,2,5,0.29,35.8,7,22,2,1,-0.26,0.44,0.74,"no","G/T","No",1,16.31,"XP_008198327.1:c.2311G>T","XP_008198327.1:p.Val771Phe","LOC664089",664089,null,"664089 [Gene Symbol: LOC664089] [Locus Tag: TcasGA2_TC012753] [Chromosome: LG9] [Map Location: ] [Description: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2] [Gene Type: protein-coding]","LOC664089; TcasGA2_TC012753"]
[1454,"NC_007424.3",14291361,"SNV","T","C","Homozygous",29,29,100,1,7,23,0.23,36.07,30,30,9,12,null,1,1,"no","C/C","No",1,107.96,"XP_008198329.1:c.[680T>C]; XP_015839209.1:c.[689T>C]; XP_015839211.1:c.[689T>C]; XP_015839212.1:c.[650T>C]","XP_008198329.1:p.[Val227Ala]; XP_015839209.1:p.[Val230Ala]; XP_015839211.1:p.[Val230Ala]; XP_015839212.1:p.[Val217Ala]","LOC664114",664114,null,"664114 [Gene Symbol: LOC664114] [Locus Tag: TcasGA2_TC012755] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC664114] [Gene Type: protein-coding]","TcasGA2_TC012755; LOC664114"]
[1455,"NC_007424.3","14298474..14298475","MNV","CT","GC","Homozygous",20,20,100,1,15,9,0.38,37.79,24,24,10,18,null,1,1,"no","GC/GC","No",1,200,"XP_975231.1:c.[545_546delCTinsGC]; XP_008198330.1:c.[557_558delCTinsGC]; XP_008198331.1:c.[512_513delCTinsGC]; XP_008198332.1:c.[512_513delCTinsGC]","XP_975231.1:p.[Thr182Ser]; XP_008198330.1:p.[Thr186Ser]; XP_008198331.1:p.[Thr171Ser]; XP_008198332.1:p.[Thr171Ser]","LOC664123",664123,null,"664123 [Gene Symbol: LOC664123] [Locus Tag: TcasGA2_TC012756] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort] [Gene Type: protein-coding]","TcasGA2_TC012756; LOC664123"]
[1456,"NC_007424.3","14301162..14301164","MNV","GGC","AAT","Homozygous",24,24,100,1,9,16,0.36,37.39,25,25,8,17,null,1,1,"no","AAT/AAT","No",1,200,"XP_008198166.1:c.715_717delGGCinsAAT","XP_008198166.1:p.Gly239Asn","LOC664131",664131,null,"664131 [Gene Symbol: LOC664131] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort-like] [Gene Type: protein-coding]","LOC664131"]
[1457,"NC_007424.3","14493545^14493546","Insertion","-","CAACAA","Homozygous",19,22,86.36,1,14,7,0.33,38.35,21,25,10,14,null,1,1,"no","CAACAA/CAACAA","No",1,200,"NP_001161900.1:c.1134_1135insCAACAA","NP_001161900.1:p.Gln383_Ser384insGlnGln","Cpap1-i",655154,"cuticular protein analogous to peritrophins 1-I","655154 [Gene Symbol: Cpap1-i] [Locus Tag: TcasGA2_TC012766] [Chromosome: LG9] [Map Location: ] [Description: cuticular protein analogous to peritrophins 1-I] [Gene Type: protein-coding]","Cpap1-i; TcasGA2_TC012766; CG13643"]
[1458,"NC_007424.3",14525398,"SNV","T","A","Homozygous",28,28,100,1,19,22,0.46,35.43,41,41,8,14,null,1,1,"no","A/A","No",1,106.57,"XP_967196.1:c.376A>T","XP_967196.1:p.Ile126Phe","LOC655550",655550,null,"655550 [Gene Symbol: LOC655550] [Locus Tag: TcasGA2_TC011721] [Chromosome: LG9] [Map Location: ] [Description: retinol dehydrogenase 11] [Gene Type: protein-coding]","TcasGA2_TC011721; LOC655550"]
[1459,"NC_007424.3",14559245,"SNV","A","C","Homozygous",24,24,100,1,23,5,0.18,37.25,28,28,11,15,null,1,1,"no","C/C","No",1,92.92,"XP_967927.1:c.1974A>C","XP_967927.1:p.Leu658Phe","LOC656294",656294,null,"656294 [Gene Symbol: LOC656294] [Locus Tag: TcasGA2_TC012775] [Chromosome: LG9] [Map Location: ] [Description: DC-STAMP domain-containing protein 1] [Gene Type: protein-coding]","LOC656294; TcasGA2_TC012775"]
[1460,"NC_007424.3",14898765,"Deletion","C","-","Heterozygous",5,20,25,0.99,0,5,0,38.8,5,21,1,2,0.61,0.07,0.33,"no","-/C","No",1,20.29,"XP_969865.2:c.[181+3686delG]; XP_008198402.2:c.[2340delG]","XP_008198402.2:p.Met780fs","LOC658378, LOC103314351","658378 , 103314351",null,"658378 [Gene Symbol: LOC658378] [Locus Tag: TcasGA2_TC011700] [Chromosome: LG9] [Map Location: ] [Description: obg-like ATPase 1] [Gene Type: protein-coding] || 103314351 [Gene Symbol: LOC103314351] [Locus Tag: TcasGA2_TC011699] [Chromosome: LG9] [Map Location: ] [Description: adenylate kinase 9] [Gene Type: protein-coding]","LOC658378; TcasGA2_TC011700 || LOC103314351; TcasGA2_TC011699"]
[1461,"NC_007424.3",15014089,"SNV","C","T","Homozygous",23,23,100,1,12,15,0.44,34.96,27,27,9,13,null,1,1,"no","T/T","No",1,91.55,"XP_001809957.2:c.794C>T","XP_001809957.2:p.Pro265Leu","LOC100142166",100142166,null,"100142166 [Gene Symbol: LOC100142166] [Locus Tag: TcasGA2_TC034460] [Chromosome: LG9] [Map Location: ] [Description: sortilin-related receptor] [Gene Type: protein-coding]","LOC100142166; TcasGA2_TC034460"]
[1462,"NC_007424.3",15015872,"SNV","A","G","Homozygous",20,20,100,1,2,18,0.1,37,20,20,6,9,null,1,1,"no","G/G","No",1,80.88,"XP_008198356.1:c.489A>G","XP_008198356.1:p.Ile163Met","LOC659038",659038,null,"659038 [Gene Symbol: LOC659038] [Locus Tag: TcasGA2_TC034461] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC659038] [Gene Type: protein-coding]","LOC659038; TcasGA2_TC034461"]
[1463,"NC_007424.3",15017074,"SNV","A","G","Homozygous",20,20,100,1,0,20,0,38.9,20,20,7,7,null,1,1,"no","G/G","No",1,80.88,"XP_008198356.1:c.1691A>G","XP_008198356.1:p.Lys564Arg","LOC659038",659038,null,"659038 [Gene Symbol: LOC659038] [Locus Tag: TcasGA2_TC034461] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC659038] [Gene Type: protein-coding]","LOC659038; TcasGA2_TC034461"]
[1464,"NC_007424.3",15109789,"SNV","C","T","Homozygous",24,24,100,1,10,14,0.42,38.83,24,24,7,10,null,1,1,"no","T/T","No",1,94.55,"XP_971655.2:c.1820C>T","XP_971655.2:p.Thr607Ile","LOC660319",660319,null,"660319 [Gene Symbol: LOC660319] [Locus Tag: TcasGA2_TC012802] [Chromosome: LG9] [Map Location: ] [Description: S1 RNA-binding domain-containing protein 1] [Gene Type: protein-coding]","LOC660319; TcasGA2_TC012802"]
[1465,"NC_007424.3",15122277,"SNV","C","T","Homozygous",26,26,100,1,18,14,0.44,36.73,32,32,14,13,null,1,1,"no","T/T","No",1,97.57,"XP_015839116.1:c.[26G>A]; XP_971879.2:c.[26G>A]; XP_971934.2:c.[26G>A]","XP_015839116.1:p.[Ser9Asn]; XP_971879.2:p.[Ser9Asn]; XP_971934.2:p.[Ser9Asn]","LOC660564",660564,null,"660564 [Gene Symbol: LOC660564] [Locus Tag: TcasGA2_TC011681] [Chromosome: LG9] [Map Location: ] [Description: probable cytosolic iron-sulfur protein assembly protein Ciao1] [Gene Type: protein-coding]","TcasGA2_TC011681; LOC660564"]
[1466,"NC_007424.3",15122732,"SNV","G","A","Homozygous",21,21,100,1,5,20,0.2,33.52,25,25,10,7,null,1,1,"no","A/A","No",1,85.5,"XP_971988.1:c.49G>A","XP_971988.1:p.Ala17Thr","LOC660682",660682,null,"660682 [Gene Symbol: LOC660682] [Locus Tag: TcasGA2_TC012804] [Chromosome: LG9] [Map Location: ] [Description: A-kinase anchor protein 10, mitochondrial] [Gene Type: protein-coding]","LOC660682; TcasGA2_TC012804"]
[1467,"NC_007424.3",15128737,"SNV","G","A","Homozygous",23,23,100,1,20,15,0.43,37.65,35,35,10,17,null,1,1,"no","A/A","No",1,91.52,"XP_972145.2:c.[652-3C>T]; XP_008198418.1:c.[692C>T]","XP_008198418.1:p.Ser231Leu","LOC103314342, LOC660849","103314342 , 660849",null,"103314342 [Gene Symbol: LOC103314342] [Locus Tag: TcasGA2_TC012805] [Chromosome: LG9] [Map Location: LG9|LG9] [Description: putative leucine-rich repeat-containing protein DDB_G0290503] [Gene Type: protein-coding] || 660849 [Gene Symbol: LOC660849] [Locus Tag: TcasGA2_TC011678] [Chromosome: LG9] [Map Location: ] [Description: 23 kDa integral membrane protein] [Gene Type: protein-coding]","LOC103314342; TcasGA2_TC012805 || TcasGA2_TC011678; LOC660849"]
[1468,"NC_007424.3",15149968,"SNV","C","A","Homozygous",23,23,100,1,5,18,0.22,38.13,23,23,7,9,null,1,1,"no","A/A","No",1,91.52,"XP_008198423.1:c.291C>A","XP_008198423.1:p.Phe97Leu","LOC103314356",103314356,null,"103314356 [Gene Symbol: LOC103314356] [Locus Tag: TcasGA2_TC034464] [Chromosome: LG9] [Map Location: ] [Description: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like] [Gene Type: protein-coding]","LOC103314356; TcasGA2_TC034464"]
[1469,"NC_007424.3",15149972,"SNV","C","T","Homozygous",22,22,100,1,5,17,0.23,37.45,22,22,7,9,null,1,1,"no","T/T","No",1,88.54,"XP_008198423.1:c.295C>T","XP_008198423.1:p.Leu99Phe","LOC103314356",103314356,null,"103314356 [Gene Symbol: LOC103314356] [Locus Tag: TcasGA2_TC034464] [Chromosome: LG9] [Map Location: ] [Description: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like] [Gene Type: protein-coding]","LOC103314356; TcasGA2_TC034464"]
[1470,"NC_007424.3",15258953,"SNV","A","G","Homozygous",21,21,100,1,15,10,0.4,37,25,25,10,14,null,1,1,"no","G/G","No",1,83.89,"XP_015839226.1:c.[131T>C]; XP_008198527.1:c.[131T>C]","XP_015839226.1:p.[Val44Ala]; XP_008198527.1:p.[Val44Ala]","LOC103314375",103314375,null,"103314375 [Gene Symbol: LOC103314375] [Locus Tag: TcasGA2_TC012880] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314375; TcasGA2_TC012880"]
[1471,"NC_007424.3",15471403,"SNV","A","G","Homozygous",22,22,100,1,10,20,0.33,38.59,30,30,7,11,null,1,1,"no","G/G","No",1,86.9,"XP_015839247.1:c.1328A>G","XP_015839247.1:p.Glu443Gly","LOC103314382",103314382,null,"103314382 [Gene Symbol: LOC103314382] [Locus Tag: TcasGA2_TC011615] [Chromosome: LG9] [Map Location: ] [Description: nuclear cap-binding protein subunit 3] [Gene Type: protein-coding]","TcasGA2_TC011615; LOC103314382"]
[1472,"NC_007424.3",15505219,"SNV","G","A","Homozygous",20,20,100,1,15,5,0.25,37.95,20,20,6,13,null,1,1,"no","A/A","No",1,82.49,"XP_015839248.1:c.110C>T","XP_015839248.1:p.Ser37Leu","LOC100142542",100142542,null,"100142542 [Gene Symbol: LOC100142542] [Locus Tag: TcasGA2_TC012862] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100142542] [Gene Type: protein-coding]","LOC100142542; TcasGA2_TC012862"]
[1473,"NC_007424.3",15595048,"SNV","T","C","Homozygous",32,32,100,1,16,21,0.43,38.22,37,37,12,21,null,1,1,"no","C/C","No",1,116.99,"XP_015839237.1:c.[998T>C]; XP_015839238.1:c.[986T>C]; XP_008198497.1:c.[998T>C]","XP_015839237.1:p.[Val333Ala]; XP_015839238.1:p.[Val329Ala]; XP_008198497.1:p.[Val333Ala]","LOC103314369",103314369,null,"103314369 [Gene Symbol: LOC103314369] [Locus Tag: TcasGA2_TC011621] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314369] [Gene Type: protein-coding]","TcasGA2_TC011621; LOC103314369"]
[1474,"NC_007424.3",15652504,"SNV","A","G","Homozygous",23,23,100,1,7,19,0.27,36.87,26,26,9,20,null,1,1,"no","G/G","No",1,89.91,"XP_015838961.1:c.1675T>C","XP_015838961.1:p.Ser559Pro","LOC660320",660320,null,"660320 [Gene Symbol: LOC660320] [Locus Tag: TcasGA2_TC012846] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC660320] [Gene Type: protein-coding]","TcasGA2_TC012846; LOC660320"]
[1475,"NC_007424.3",15745770,"SNV","G","A","Homozygous",20,20,100,1,11,10,0.48,38.2,21,21,9,13,null,1,1,"no","A/A","No",1,82.49,"NP_001155992.1:c.[598G>A]; XP_015838938.1:c.[11-15738C>T]","NP_001155992.1:p.Val200Ile","LOC659813, LOC100142219","659813 , 100142219","somatostatin receptor type 2, uncharacterized LOC100142219","659813 [Gene Symbol: LOC659813] [Locus Tag: TcasGA2_TC012842] [Chromosome: LG9] [Map Location: ] [Description: somatostatin receptor type 2] [Gene Type: protein-coding] || 100142219 [Gene Symbol: LOC100142219] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100142219] [Gene Type: protein-coding]","LOC659813; TcasGA2_TC012842 || LOC100142219"]
[1476,"NC_007425.3",102738,"Deletion","G","-","Heterozygous",5,20,25,0.99,4,2,0.33,34.6,6,23,2,5,-0.48,0.5,0.6,"no","-/G","No",1,19.86,"XP_008198552.1:c.1953delG","XP_008198552.1:p.Ala652fs","LOC660698",660698,null,"660698 [Gene Symbol: LOC660698] [Locus Tag: TcasGA2_TC011242] [Chromosome: LG10] [Map Location: ] [Description: ATP-dependent RNA helicase DDX54] [Gene Type: protein-coding]","LOC660698; TcasGA2_TC011242"]
[1477,"NC_007425.3",712929,"SNV","C","T","Heterozygous",12,25,48,1,12,4,0.25,38.17,16,33,5,7,0.19,0.31,1,"no","C/T","No",1,96.16,"XP_972566.1:c.[170C>T]; XP_008198564.1:c.[384-4090C>T]","XP_972566.1:p.Ser57Phe","LOC661357, LOC661308","661357 , 661308",null,"661357 [Gene Symbol: LOC661357] [Locus Tag: TcasGA2_TC011253] [Chromosome: LG10] [Map Location: ] [Description: protein unc-13 homolog D] [Gene Type: protein-coding] || 661308 [Gene Symbol: LOC661308] [Locus Tag: TcasGA2_TC011254] [Chromosome: LG10] [Map Location: ] [Description: glutarate-semialdehyde dehydrogenase DavD] [Gene Type: protein-coding]","TcasGA2_TC011253; LOC661357 || TcasGA2_TC011254; LOC661308"]
[1478,"NC_007425.3",1499598,"SNV","C","A","Homozygous",30,30,100,1,25,10,0.29,38.33,35,35,12,14,null,1,1,"no","A/A","No",1,112.57,"XP_015839391.1:c.[85-8665G>T]; XP_015839395.1:c.[463-8665G>T]; XP_015839390.1:c.[697-8665G>T]; XP_015839389.1:c.[697-8665G>T]; XP_008199621.1:c.[1673C>A]; XP_015839393.1:c.[85-8665G>T]; XP_015839394.1:c.[46-8665G>T]; XP_015839392.1:c.[85-8665G>T]","XP_008199621.1:p.Pro558His","LOC655559, LOC100141690","655559 , 100141690",null,"655559 [Gene Symbol: LOC655559] [Locus Tag: TcasGA2_TC016080] [Chromosome: LG10] [Map Location: ] [Description: protein sickie] [Gene Type: protein-coding] || 100141690 [Gene Symbol: LOC100141690] [Locus Tag: TcasGA2_TC031341] [Chromosome: LG10] [Map Location: ] [Description: nose resistant to fluoxetine protein 6-like] [Gene Type: protein-coding]","LOC655559; TcasGA2_TC016080 || TcasGA2_TC031341; LOC100141690"]
[1479,"NC_007425.3",1801021,"SNV","A","G","Heterozygous",12,25,48,1,12,0,0,39.67,12,25,4,7,0.73,0.03,0.33,"no","A/G","No",1,97.69,"XP_015839409.1:c.176A>G","XP_015839409.1:p.Glu59Gly","LOC107398740",107398740,null,"107398740 [Gene Symbol: LOC107398740] [Locus Tag: TcasGA2_TC031350] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398740] [Gene Type: protein-coding]","LOC107398740; TcasGA2_TC031350"]
[1480,"NC_007425.3",2122352,"SNV","G","A","Homozygous",21,21,100,1,2,21,0.09,38.1,23,23,9,8,null,1,1,"no","A/A","No",1,85.5,"XP_008197948.2:c.346G>A","XP_008197948.2:p.Gly116Ser","LOC656826",656826,null,"656826 [Gene Symbol: LOC656826] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: phospholipase A1-like] [Gene Type: protein-coding]","LOC656826"]
[1481,"NC_007425.3","2122359..2122360","MNV","AC","TT","Homozygous",20,20,100,1,2,20,0.09,39.47,22,22,11,8,null,1,1,"no","TT/TT","No",1,200,"XP_008197948.2:c.353_354delACinsTT","XP_008197948.2:p.Tyr118Phe","LOC656826",656826,null,"656826 [Gene Symbol: LOC656826] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: phospholipase A1-like] [Gene Type: protein-coding]","LOC656826"]
[1482,"NC_007425.3",2272693,"SNV","G","A","Homozygous",20,20,100,1,5,15,0.25,39.8,20,20,7,9,null,1,1,"no","A/A","No",1,82.49,"XP_008197874.1:c.[4016G>A]; XP_008197869.1:c.[4019G>A]","XP_008197874.1:p.[Ser1339Asn]; XP_008197869.1:p.[Ser1340Asn]","LOC657391",657391,null,"657391 [Gene Symbol: LOC657391] [Locus Tag: TcasGA2_TC011290] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase listerin] [Gene Type: protein-coding]","TcasGA2_TC011290; LOC657391"]
[1483,"NC_007425.3",2279587,"SNV","G","C","Homozygous",21,21,100,1,10,11,0.48,37.29,21,21,9,16,null,1,1,"no","C/C","No",1,83.89,"XP_015839415.1:c.205C>G","XP_015839415.1:p.His69Asp","LOC107398746",107398746,null,"107398746 [Gene Symbol: LOC107398746] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: shematrin-like protein 3] [Gene Type: protein-coding]","LOC107398746"]
[1484,"NC_007425.3","2437570..2437571","MNV","CC","GT","Homozygous",21,21,100,1,20,5,0.2,36.57,25,25,13,15,null,1,1,"no","GT/GT","No",1,200,"XP_008198136.1:c.[555_556delCCinsGT]; XP_015839448.1:c.[555_556delCCinsGT]; XP_971431.2:c.[555_556delCCinsGT]; XP_008198135.1:c.[555_556delCCinsGT]","XP_008198136.1:p.[Leu186Phe]; XP_015839448.1:p.[Leu186Phe]; XP_971431.2:p.[Leu186Phe]; XP_008198135.1:p.[Leu186Phe]","LOC660076",660076,null,"660076 [Gene Symbol: LOC660076] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: rho GTPase-activating protein 19] [Gene Type: protein-coding]","LOC660076"]
[1485,"NC_007425.3",2444694,"SNV","C","A","Heterozygous",7,20,35,1,7,5,0.42,35.71,12,29,4,3,-0.16,0.76,0.88,"no","A/C","No",1,41.92,"XP_008198134.1:c.565G>T","XP_008198134.1:p.Gly189Trp","LOC659950",659950,null,"659950 [Gene Symbol: LOC659950] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: adenomatous polyposis coli homolog] [Gene Type: protein-coding]","LOC659950"]
[1486,"NC_007425.3",3116133,"SNV","A","T","Homozygous",23,23,100,1,15,9,0.38,37.87,24,24,9,12,null,1,1,"no","T/T","No",1,91.55,"XP_015839477.1:c.130A>T","XP_015839477.1:p.Thr44Ser","LOC103314420",103314420,null,"103314420 [Gene Symbol: LOC103314420] [Locus Tag: TcasGA2_TC011306] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314420] [Gene Type: protein-coding]","LOC103314420; or14; TcasGA2_TC011306"]
[1487,"NC_007425.3",3116137,"SNV","C","T","Homozygous",22,22,100,1,14,9,0.39,37.86,23,23,9,12,null,1,1,"no","T/T","No",1,88.54,"XP_015839477.1:c.134C>T","XP_015839477.1:p.Ala45Val","LOC103314420",103314420,null,"103314420 [Gene Symbol: LOC103314420] [Locus Tag: TcasGA2_TC011306] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314420] [Gene Type: protein-coding]","LOC103314420; or14; TcasGA2_TC011306"]
[1488,"NC_007425.3",3131902,"SNV","C","A","Heterozygous",6,21,28.57,1,2,6,0.25,41,8,23,1,1,2.34,0.23,0.88,"no","A/C","No",1,26.3,"XP_966788.1:c.310G>T","XP_966788.1:p.Gly104Trp","LOC655175",655175,null,"655175 [Gene Symbol: LOC655175] [Locus Tag: TcasGA2_TC011186] [Chromosome: LG10] [Map Location: ] [Description: coiled-coil domain-containing protein 130 homolog] [Gene Type: protein-coding]","LOC655175; TcasGA2_TC011186"]
[1489,"NC_007425.3",3180392,"SNV","A","G","Homozygous",25,25,100,1,9,17,0.35,37.76,26,26,9,15,null,1,1,"no","G/G","No",1,95.93,"XP_008198647.1:c.[1261A>G]; XP_008198645.1:c.[1261A>G]","XP_008198647.1:p.[Ser421Gly]; XP_008198645.1:p.[Ser421Gly]","LOC656159",656159,null,"656159 [Gene Symbol: LOC656159] [Locus Tag: TcasGA2_TC011313] [Chromosome: LG10] [Map Location: ] [Description: gamma-glutamyltransferase 7] [Gene Type: protein-coding]","LOC656159; TcasGA2_TC011313"]
[1490,"NC_007425.3",3199478,"SNV","C","T","Homozygous",20,20,100,1,5,15,0.25,37.7,20,20,9,17,null,1,1,"no","T/T","No",1,82.52,"XP_968111.1:c.416G>A","XP_968111.1:p.Gly139Glu","LOC656492",656492,null,"656492 [Gene Symbol: LOC656492] [Locus Tag: TcasGA2_TC011177] [Chromosome: LG10] [Map Location: ] [Description: ELMO domain-containing protein 2] [Gene Type: protein-coding]","TcasGA2_TC011177; LOC656492"]
[1491,"NC_007425.3",3204465,"SNV","G","T","Heterozygous",16,23,69.57,1,5,14,0.26,39.38,19,26,6,5,3.24,0.51,0.58,"no","G/T","No",1,41.1,"XP_008198648.1:c.1377C>A","XP_008198648.1:p.Asp459Glu","LOC103314407",103314407,null,"103314407 [Gene Symbol: LOC103314407] [Locus Tag: TcasGA2_TC011176] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314407; TcasGA2_TC011176"]
[1492,"NC_007425.3",3204472,"SNV","A","T","Heterozygous",15,20,75,0.99,4,14,0.22,39.93,18,23,6,4,3.27,0.27,0.69,"no","A/T","No",1,21,"XP_008198648.1:c.1370T>A","XP_008198648.1:p.Ile457Asn","LOC103314407",103314407,null,"103314407 [Gene Symbol: LOC103314407] [Locus Tag: TcasGA2_TC011176] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314407; TcasGA2_TC011176"]
[1493,"NC_007425.3",3207156,"SNV","T","C","Heterozygous",8,21,38.1,1,5,5,0.5,35.88,10,30,3,5,-0.07,0.73,0.95,"no","C/T","No",1,58.15,"XP_008198648.1:c.483A>G","XP_008198648.1:p.Ile161Met","LOC103314407",103314407,null,"103314407 [Gene Symbol: LOC103314407] [Locus Tag: TcasGA2_TC011176] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314407; TcasGA2_TC011176"]
[1494,"NC_007425.3",3207161,"SNV","G","C","Heterozygous",9,22,40.91,1,5,9,0.36,35.33,14,34,7,10,-2.04,0.74,0.68,"no","complex","No",1,200,"XP_008198648.1:c.478C>G","XP_008198648.1:p.Gln160Glu","LOC103314407",103314407,null,"103314407 [Gene Symbol: LOC103314407] [Locus Tag: TcasGA2_TC011176] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314407; TcasGA2_TC011176"]
[1495,"NC_007425.3",3207170,"SNV","C","T","Heterozygous",13,22,59.09,1,12,7,0.37,37,19,32,6,7,0.4,0.43,0.85,"no","C/T","No",1,68.03,"XP_008198648.1:c.469G>A","XP_008198648.1:p.Val157Ile","LOC103314407",103314407,null,"103314407 [Gene Symbol: LOC103314407] [Locus Tag: TcasGA2_TC011176] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314407; TcasGA2_TC011176"]
[1496,"NC_007425.3",3469013,"SNV","T","C","Homozygous",20,20,100,1,16,4,0.2,38.05,20,20,9,12,null,1,1,"no","C/C","No",1,80.88,"XP_969824.1:c.73T>C","XP_969824.1:p.Ser25Pro","LOC658333",658333,null,"658333 [Gene Symbol: LOC658333] [Locus Tag: TcasGA2_TC011324] [Chromosome: LG10] [Map Location: ] [Description: WAP four-disulfide core domain-like protein] [Gene Type: protein-coding]","TcasGA2_TC011324; LOC658333; WAP"]
[1497,"NC_007425.3",4007111,"SNV","G","C","Heterozygous",10,21,47.62,1,6,10,0.38,36.4,16,27,4,7,-2.78,0.04,0.57,"no","C/G","No",1,82.47,"XP_015839539.1:c.[316G>C]; XP_015839538.1:c.[316G>C]; XP_015839537.1:c.[316G>C]","XP_015839539.1:p.[Asp106His]; XP_015839538.1:p.[Asp106His]; XP_015839537.1:p.[Asp106His]","LOC107398764",107398764,null,"107398764 [Gene Symbol: LOC107398764] [Locus Tag: TcasGA2_TC011345] [Chromosome: LG10] [Map Location: ] [Description: odorant receptor 22c-like] [Gene Type: protein-coding]","LOC107398764; TcasGA2_TC011345"]
[1498,"NC_007425.3",4009312,"SNV","T","A","Homozygous",29,29,100,1,19,16,0.46,34,35,35,7,18,null,1,1,"no","A/A","No",1,109.57,"XP_015839536.1:c.1156A>T","XP_015839536.1:p.Thr386Ser","LOC103314425",103314425,null,"103314425 [Gene Symbol: LOC103314425] [Locus Tag: TcasGA2_TC031376] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314425] [Gene Type: protein-coding]","TcasGA2_TC031376; LOC103314425"]
[1499,"NC_007425.3",4009461,"SNV","C","G","Heterozygous",16,20,80,0.88,7,14,0.33,36.81,21,25,5,9,-1.46,0.85,0.92,"no","C/G","No",1,9.35,"XP_015839536.1:c.1007G>C","XP_015839536.1:p.Ser336Thr","LOC103314425",103314425,null,"103314425 [Gene Symbol: LOC103314425] [Locus Tag: TcasGA2_TC031376] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314425] [Gene Type: protein-coding]","TcasGA2_TC031376; LOC103314425"]
[1500,"NC_007425.3",4257938,"Deletion","C","-","Heterozygous",5,22,22.73,0.97,5,0,0,35.8,5,24,1,5,-1.75,0.31,0.76,"no","-/C","No",1,15.13,"XP_008198704.1:c.252delG","XP_008198704.1:p.Lys85fs","LOC661193",661193,null,"661193 [Gene Symbol: LOC661193] [Locus Tag: TcasGA2_TC011127] [Chromosome: LG10] [Map Location: ] [Description: histone-lysine N-methyltransferase EHMT2] [Gene Type: protein-coding]","LOC661193; TcasGA2_TC011127"]
[1501,"NC_007425.3",4493577,"Deletion","C","-","Heterozygous",5,20,25,0.91,0,5,0,32,5,20,2,2,-2.71,0.12,0.54,"no","-/C","No",1,10.65,"XP_015839577.1:c.131delG","XP_015839577.1:p.Gly44fs","LOC103314533",103314533,null,"103314533 [Gene Symbol: LOC103314533] [Locus Tag: TcasGA2_TC016201] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314533; TcasGA2_TC016201"]
[1502,"NC_007425.3",4514068,"Deletion","A","-","Heterozygous",8,36,22.22,0.96,0,8,0,39,8,38,1,1,1.22,0.1,0.51,"no","-/A","Yes",3,13.69,"XP_015839555.1:c.360delA","XP_015839555.1:p.Asn121fs","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1503,"NC_007425.3",4518281,"SNV","T","C","Homozygous",22,22,100,1,16,10,0.38,37.5,26,26,11,14,null,1,1,"no","C/C","No",1,86.9,"XP_015839555.1:c.[1587+1087T>C]; XP_015839557.1:c.[2161A>G]; XP_015839556.1:c.[2161A>G]","XP_015839557.1:p.[Met721Val]; XP_015839556.1:p.[Met721Val]","LOC656972, LOC107398773","656972 , 107398773",null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding] || 107398773 [Gene Symbol: LOC107398773] [Locus Tag: TcasGA2_TC016199] [Chromosome: LG10] [Map Location: ] [Description: G-protein coupled receptor 126-like] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2 || LOC107398773; TcasGA2_TC016199"]
[1504,"NC_007425.3",4518352,"SNV","T","C","Heterozygous",17,33,51.52,1,11,10,0.48,34.71,21,37,7,13,-2.59,0.63,0.4,"no","C/T","No",1,124.83,"XP_015839557.1:c.[2090A>G]; XP_015839556.1:c.[2090A>G]; XP_015839555.1:c.[1587+1158T>C]","XP_015839557.1:p.[Asn697Ser]; XP_015839556.1:p.[Asn697Ser]","LOC656972, LOC107398773","656972 , 107398773",null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding] || 107398773 [Gene Symbol: LOC107398773] [Locus Tag: TcasGA2_TC016199] [Chromosome: LG10] [Map Location: ] [Description: G-protein coupled receptor 126-like] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2 || LOC107398773; TcasGA2_TC016199"]
[1505,"NC_007425.3",4555916,"SNV","G","A","Heterozygous",5,21,23.81,0.99,1,5,0.17,40,6,22,3,5,2.77,0.06,0.56,"no","A/G","No",1,18.29,"XP_015839555.1:c.9979G>A","XP_015839555.1:p.Val3327Met","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1506,"NC_007425.3",5090169,"SNV","G","C","Homozygous",21,21,100,1,10,11,0.48,36.48,21,21,8,13,null,1,1,"no","C/C","No",1,83.89,"XP_008198829.1:c.1729G>C","XP_008198829.1:p.Glu577Gln","LOC658561",658561,null,"658561 [Gene Symbol: LOC658561] [Locus Tag: TcasGA2_TC011051] [Chromosome: LG10] [Map Location: ] [Description: histone-lysine N-methyltransferase PRDM9] [Gene Type: protein-coding]","LOC658561; TcasGA2_TC011051"]
[1507,"NC_007425.3","5477972..5477973","MNV","AA","GG","Homozygous",21,21,100,1,6,17,0.26,36.95,23,23,10,6,null,1,1,"no","GG/GG","No",1,200,"XP_015839591.1:c.[1119_1120delAAinsGG]; XP_968654.1:c.[1122_1123delAAinsGG]","XP_015839591.1:p.[Thr374Ala]; XP_968654.1:p.[Thr375Ala]","LOC657081",657081,null,"657081 [Gene Symbol: LOC657081] [Locus Tag: TcasGA2_TC011062] [Chromosome: LG10] [Map Location: ] [Description: innexin inx7] [Gene Type: protein-coding]","TcasGA2_TC011062; LOC657081"]
[1508,"NC_007425.3",5611884,"SNV","G","A","Heterozygous",14,21,66.67,1,8,6,0.43,37.71,14,23,4,7,-1.64,0.75,0.87,"no","A/G","No",1,45.31,"XP_008198819.1:c.[2692G>A]; XP_015839579.1:c.[2692G>A]","XP_008198819.1:p.[Gly898Ser]; XP_015839579.1:p.[Gly898Ser]","LOC656407",656407,null,"656407 [Gene Symbol: LOC656407] [Locus Tag: TcasGA2_TC011068] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC656407; TcasGA2_TC011068"]
[1509,"NC_007425.3",5786801,"SNV","G","A","Heterozygous",7,24,29.17,1,7,0,0,40.14,7,29,2,3,0.92,{"v":0.00558,"d":"5.58E-03"},0.04,"no","A/G","No",1,35.35,"XP_966528.2:c.2573C>T","XP_966528.2:p.Thr858Ile","LOC654966",654966,null,"654966 [Gene Symbol: LOC654966] [Locus Tag: TcasGA2_TC011400] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC654966] [Gene Type: protein-coding]","TcasGA2_TC011400; LOC654966"]
[1510,"NC_007425.3",5892542,"SNV","G","C","Homozygous",24,24,100,1,13,20,0.39,36.96,33,33,10,15,null,1,1,"no","C/C","No",1,89.91,"NP_001164243.1:c.759C>G","NP_001164243.1:p.Asp253Glu","Ance-3",658170,"angiotensin-converting enzyme 3","658170 [Gene Symbol: Ance-3] [Locus Tag: TcasGA2_TC031642] [Chromosome: LG10] [Map Location: ] [Description: angiotensin-converting enzyme 3] [Gene Type: protein-coding]","TcasGA2_TC031642; Ance-3; GLEAN_02092"]
[1511,"NC_007425.3",5915610,"SNV","G","A","Homozygous",20,20,100,1,8,14,0.36,38.95,22,22,9,9,null,1,1,"no","A/A","No",1,82.49,"XP_969445.1:c.[127C>T]; XP_015839613.1:c.[127C>T]","XP_969445.1:p.[Pro43Ser]; XP_015839613.1:p.[Pro43Ser]","LOC658002",658002,null,"658002 [Gene Symbol: LOC658002] [Locus Tag: TcasGA2_TC031641] [Chromosome: LG10] [Map Location: ] [Description: 15-hydroxyprostaglandin dehydrogenase [NAD(+)]-like] [Gene Type: protein-coding]","TcasGA2_TC031641; LOC658002"]
[1512,"NC_007425.3",5920116,"SNV","C","G","Heterozygous",6,24,25,0.99,6,0,0,39.17,6,28,1,3,0.57,0.03,0.09,"no","C/G","No",1,22.95,"XP_008199894.2:c.975C>G","XP_008199894.2:p.Phe325Leu","LOC657844",657844,null,"657844 [Gene Symbol: LOC657844] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: tenascin] [Gene Type: protein-coding]","LOC657844; NimCl1"]
[1513,"NC_007425.3",5920119,"Deletion","G","-","Heterozygous",6,24,25,0.94,6,0,0,35.83,6,29,1,3,-2.02,0.01,0.08,"no","-/G","No",1,12.41,"XP_008199894.2:c.978delG","XP_008199894.2:p.Asp328fs","LOC657844",657844,null,"657844 [Gene Symbol: LOC657844] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: tenascin] [Gene Type: protein-coding]","LOC657844; NimCl1"]
[1514,"NC_007425.3",5920639,"SNV","T","C","Homozygous",23,23,100,1,4,23,0.15,37.57,27,27,9,11,null,1,1,"no","C/C","No",1,89.9,"XP_008199894.2:c.1498T>C","XP_008199894.2:p.Tyr500His","LOC657844",657844,null,"657844 [Gene Symbol: LOC657844] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: tenascin] [Gene Type: protein-coding]","LOC657844; NimCl1"]
[1515,"NC_007425.3",5920667,"SNV","G","T","Homozygous",22,22,100,1,7,17,0.29,38.23,24,24,8,11,null,1,1,"no","T/T","No",1,88.54,"XP_008199894.2:c.1526G>T","XP_008199894.2:p.Gly509Val","LOC657844",657844,null,"657844 [Gene Symbol: LOC657844] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: tenascin] [Gene Type: protein-coding]","LOC657844; NimCl1"]
[1516,"NC_007425.3",5932722,"SNV","T","C","Homozygous",32,32,100,1,21,21,0.5,35.78,42,42,13,22,null,1,1,"no","C/C","No",1,116.98,"XP_969227.1:c.214A>G","XP_969227.1:p.Thr72Ala","LOC657687",657687,null,"657687 [Gene Symbol: LOC657687] [Locus Tag: TcasGA2_TC031638] [Chromosome: LG10] [Map Location: ] [Description: transmembrane protein 161B] [Gene Type: protein-coding]","LOC657687; TcasGA2_TC031638"]
[1517,"NC_007425.3","5944034^5944035","Insertion","-","C","Heterozygous",5,25,20,0.91,5,0,0,36.6,5,26,1,4,0.48,0.02,0.02,"no","-/C","No",1,10.29,"XP_968936.1:c.130_131insC","XP_968936.1:p.Met44fs","LOC657380",657380,null,"657380 [Gene Symbol: LOC657380] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: glutamate dehydrogenase, mitochondrial] [Gene Type: protein-coding]","LOC657380"]
[1518,"NC_007425.3",6016454,"SNV","T","C","Homozygous",20,20,100,1,15,8,0.35,36.05,23,23,6,15,null,1,1,"no","C/C","No",1,80.88,"XP_008199891.1:c.1316T>C","XP_008199891.1:p.Leu439Ser","LOC656558",656558,null,"656558 [Gene Symbol: LOC656558] [Locus Tag: TcasGA2_TC031632] [Chromosome: LG10] [Map Location: ] [Description: collagen alpha-1(V) chain] [Gene Type: protein-coding]","LOC656558; TcasGA2_TC031632"]
[1519,"NC_007425.3",6027730,"SNV","G","A","Homozygous",20,20,100,1,8,16,0.33,37.3,24,24,8,13,null,1,1,"no","A/A","No",1,82.49,"XP_015839570.1:c.[3823G>A]; XP_015839572.1:c.[3823G>A]; XP_015839573.1:c.[3712G>A]; XP_015839568.1:c.[3823G>A]; XP_015839569.1:c.[3823G>A]; XP_015839571.1:c.[3823G>A]; XP_008199877.1:c.[3793G>A]","XP_015839570.1:p.[Ala1275Thr]; XP_015839572.1:p.[Ala1275Thr]; XP_015839573.1:p.[Ala1238Thr]; XP_015839568.1:p.[Ala1275Thr]; XP_015839569.1:p.[Ala1275Thr]; XP_015839571.1:p.[Ala1275Thr]; XP_008199877.1:p.[Ala1265Thr]","LOC656472",656472,null,"656472 [Gene Symbol: LOC656472] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: protein transport protein Sec16A] [Gene Type: protein-coding]","LOC656472"]
[1520,"NC_007425.3",6081180,"SNV","A","T","Homozygous",20,20,100,1,10,14,0.42,36.7,24,24,12,12,null,1,1,"no","T/T","No",1,79.51,"XP_008199873.1:c.[1604T>A]; XP_008199871.2:c.[1721T>A]; XP_008199872.1:c.[1613T>A]","XP_008199873.1:p.[Ile535Asn]; XP_008199871.2:p.[Ile574Asn]; XP_008199872.1:p.[Ile538Asn]","LOC655977",655977,null,"655977 [Gene Symbol: LOC655977] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: cytosolic purine 5'-nucleotidase] [Gene Type: protein-coding]","LOC655977"]
[1521,"NC_007425.3",6081185,"SNV","G","C","Homozygous",20,20,100,1,10,15,0.4,36.95,25,25,11,12,null,1,1,"no","C/C","No",1,80.88,"XP_008199871.2:c.[1716C>G]; XP_008199873.1:c.[1599C>G]; XP_008199872.1:c.[1608C>G]","XP_008199871.2:p.[Asp572Glu]; XP_008199873.1:p.[Asp533Glu]; XP_008199872.1:p.[Asp536Glu]","LOC655977",655977,null,"655977 [Gene Symbol: LOC655977] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: cytosolic purine 5'-nucleotidase] [Gene Type: protein-coding]","LOC655977"]
[1522,"NC_007425.3",6093445,"SNV","C","T","Homozygous",20,20,100,1,14,9,0.39,38.15,23,23,9,13,null,1,1,"no","T/T","No",1,79.51,"XP_967374.1:c.[87+802C>T]; XP_015839553.1:c.[1256G>A]","XP_015839553.1:p.Arg419Lys","LOC655722, LOC103314776","655722 , 103314776",null,"655722 [Gene Symbol: LOC655722] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: DNA mismatch repair protein Msh2] [Gene Type: protein-coding] || 103314776 [Gene Symbol: LOC103314776] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314776] [Gene Type: protein-coding]","LOC655722 || LOC103314776"]
[1523,"NC_007425.3",6130712,"SNV","A","G","Homozygous",21,21,100,1,7,16,0.3,39.33,23,23,6,15,null,1,1,"no","G/G","No",1,83.89,"XP_967034.2:c.151A>G","XP_967034.2:p.Thr51Ala","LOC655401",655401,null,"655401 [Gene Symbol: LOC655401] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: integrator complex subunit 3 homolog] [Gene Type: protein-coding]","LOC655401"]
[1524,"NC_007425.3",6149474,"SNV","G","T","Homozygous",20,20,100,1,12,12,0.5,38.5,24,24,8,13,null,1,1,"no","T/T","No",1,82.52,"XP_966763.1:c.330G>T","XP_966763.1:p.Glu110Asp","LOC655162",655162,null,"655162 [Gene Symbol: LOC655162] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: KAT8 regulatory NSL complex subunit 1] [Gene Type: protein-coding]","LOC655162"]
[1525,"NC_007425.3",6183308,"SNV","C","A","Heterozygous",8,27,29.63,1,0,8,0,40.62,8,29,1,3,2.04,0.23,0.46,"no","A/C","No",1,35.11,"XP_966362.3:c.[73G>T]; XP_008198885.1:c.[73G>T]","XP_966362.3:p.[Glu25*]; XP_008198885.1:p.[Glu25*]","LOC654853",654853,null,"654853 [Gene Symbol: LOC654853] [Locus Tag: TcasGA2_TC011044] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC011044; LOC654853"]
[1526,"NC_007425.3",6235210,"SNV","T","C","Heterozygous",6,22,27.27,1,0,6,0,39.67,6,31,2,3,1.33,0.12,0.25,"no","C/T","No",1,29.82,"XP_008198893.1:c.[1397A>G]; XP_008198892.1:c.[1403A>G]","XP_008198893.1:p.[Lys466Arg]; XP_008198892.1:p.[Lys468Arg]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1527,"NC_007425.3",6235222,"SNV","A","G","Heterozygous",12,22,54.55,1,4,11,0.27,38.92,15,29,6,7,1.06,0.18,0.96,"no","A/G","No",1,79.21,"XP_008198893.1:c.[1385T>C]; XP_008198892.1:c.[1391T>C]","XP_008198893.1:p.[Phe462Ser]; XP_008198892.1:p.[Phe464Ser]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1528,"NC_007425.3",6235250,"SNV","A","C","Heterozygous",11,21,52.38,1,5,10,0.33,38.91,15,25,6,6,-1.06,0.16,0.99,"no","A/C","No",1,77.32,"XP_008198892.1:c.[1363T>G]; XP_008198893.1:c.[1357T>G]","XP_008198892.1:p.[Trp455Gly]; XP_008198893.1:p.[Trp453Gly]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1529,"NC_007425.3",6235432,"SNV","T","C","Heterozygous",14,21,66.67,1,10,11,0.48,38.5,21,28,9,7,-0.48,0.54,0.85,"no","C/T","No",1,43.76,"XP_008198893.1:c.[1175A>G]; XP_008198892.1:c.[1181A>G]","XP_008198893.1:p.[Asn392Ser]; XP_008198892.1:p.[Asn394Ser]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1530,"NC_007425.3",6235441,"SNV","G","T","Heterozygous",5,21,23.81,0.96,5,0,0,39.4,5,28,4,5,0.7,0.03,0.31,"no","G/T","No",1,13.6,"XP_008198893.1:c.[1166C>A]; XP_008198892.1:c.[1172C>A]","XP_008198893.1:p.[Thr389Lys]; XP_008198892.1:p.[Thr391Lys]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1531,"NC_007425.3",6235447,"SNV","C","G","Heterozygous",6,23,26.09,1,6,0,0,38.67,6,30,5,5,0.07,0.12,0.24,"no","C/G","No",1,25.76,"XP_008198893.1:c.[1160G>C]; XP_008198892.1:c.[1166G>C]","XP_008198893.1:p.[Arg387Thr]; XP_008198892.1:p.[Arg389Thr]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1532,"NC_007425.3","6235455..6235456","MNV","CT","TG","Heterozygous",17,26,65.38,1,8,15,0.35,38.88,23,32,15,12,0.11,0.79,0.62,"no","complex","No",1,200,"XP_008198893.1:c.[1151_1152delAGinsCA]; XP_008198892.1:c.[1157_1158delAGinsCA]","XP_008198893.1:p.[Lys384Thr]; XP_008198892.1:p.[Lys386Thr]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1533,"NC_007425.3",6235460,"SNV","C","T","Heterozygous",16,26,61.54,1,8,14,0.36,39.25,22,32,10,9,0.03,0.46,0.56,"no","C/T","No",1,69.73,"XP_008198893.1:c.[1147G>A]; XP_008198892.1:c.[1153G>A]","XP_008198893.1:p.[Val383Ile]; XP_008198892.1:p.[Val385Ile]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1534,"NC_007425.3",6235481,"SNV","C","T","Heterozygous",16,27,59.26,1,6,13,0.32,38.75,19,33,10,9,2.42,0.36,0.7,"no","C/T","No",1,79.76,"XP_008198892.1:c.[1132G>A]; XP_008198893.1:c.[1126G>A]","XP_008198892.1:p.[Glu378Lys]; XP_008198893.1:p.[Glu376Lys]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1535,"NC_007425.3",6385910,"SNV","G","A","Heterozygous",13,23,56.52,1,0,13,0,38.38,13,23,5,4,-1.67,0.19,0.27,"no","A/G","No",1,78.05,"XP_967878.1:c.[1303G>A]; XP_008198901.1:c.[1303G>A]","XP_967878.1:p.[Asp435Asn]; XP_008198901.1:p.[Asp435Asn]","LOC656244",656244,null,"656244 [Gene Symbol: LOC656244] [Locus Tag: TcasGA2_TC011457] [Chromosome: LG10] [Map Location: ] [Description: coiled-coil domain-containing protein 186] [Gene Type: protein-coding]","TcasGA2_TC011457; LOC656244"]
[1536,"NC_007425.3",6417614,"SNV","G","T","Homozygous",20,20,100,1,6,17,0.26,37.45,23,23,7,9,null,1,1,"no","T/T","No",1,82.52,"XP_008198904.2:c.199C>A","XP_008198904.2:p.Gln67Lys","LOC656408",656408,null,"656408 [Gene Symbol: LOC656408] [Locus Tag: TcasGA2_TC011024] [Chromosome: LG10] [Map Location: ] [Description: heat shock protein 75 kDa, mitochondrial] [Gene Type: protein-coding]","LOC656408; TcasGA2_TC011024"]
[1537,"NC_007425.3",6501436,"SNV","C","A","Homozygous",20,20,100,1,0,20,0,39.95,20,20,4,8,null,1,1,"no","A/A","No",1,82.49,"XP_015839624.1:c.[916C>A]; NP_001034527.2:c.[952C>A]","XP_015839624.1:p.[Leu306Met]; NP_001034527.2:p.[Leu318Met]","Kr",641605,"Kruppel","641605 [Gene Symbol: Kr] [Locus Tag: TcasGA2_TC011460] [Chromosome: LG10] [Map Location: ] [Description: Kruppel] [Gene Type: protein-coding]","Kr; TcasGA2_TC011460"]
[1538,"NC_007425.3",6541730,"SNV","G","C","Heterozygous",8,23,34.78,1,0,8,0,39.75,8,24,1,2,1.97,0.31,0.87,"no","C/G","No",1,51.58,"XP_008198905.1:c.894C>G","XP_008198905.1:p.Asp298Glu","LOC656575",656575,null,"656575 [Gene Symbol: LOC656575] [Locus Tag: TcasGA2_TC011023] [Chromosome: LG10] [Map Location: ] [Description: cysteine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC656575; TcasGA2_TC011023"]
[1539,"NC_007425.3",6541737,"SNV","G","A","Heterozygous",8,24,33.33,1,0,8,0,40,8,24,1,2,1.99,0.2,1,"no","A/G","No",1,48.12,"XP_008198905.1:c.887C>T","XP_008198905.1:p.Thr296Met","LOC656575",656575,null,"656575 [Gene Symbol: LOC656575] [Locus Tag: TcasGA2_TC011023] [Chromosome: LG10] [Map Location: ] [Description: cysteine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC656575; TcasGA2_TC011023"]
[1540,"NC_007425.3",6739235,"SNV","G","A","Homozygous",31,31,100,1,28,8,0.22,35.84,36,36,12,22,null,1,1,"no","A/A","No",1,106.56,"XP_968950.1:c.379G>A","XP_968950.1:p.Ala127Thr","LOC657395",657395,null,"657395 [Gene Symbol: LOC657395] [Locus Tag: TcasGA2_TC011467] [Chromosome: LG10] [Map Location: ] [Description: protein prenyltransferase alpha subunit repeat-containing protein 1-B] [Gene Type: protein-coding]","TcasGA2_TC011467; LOC657395"]
[1541,"NC_007425.3",6802122,"SNV","T","A","Homozygous",23,23,100,1,20,3,0.13,39.52,23,23,9,11,null,1,1,"no","A/A","No",1,91.51,"XP_015839669.1:c.405A>T","XP_015839669.1:p.Glu135Asp","LOC103314485",103314485,null,"103314485 [Gene Symbol: LOC103314485] [Locus Tag: TcasGA2_TC011008] [Chromosome: LG10] [Map Location: ] [Description: zinc finger protein 239] [Gene Type: protein-coding]","TcasGA2_TC011008; LOC103314485"]
[1542,"NC_007425.3",6899709,"SNV","T","C","Heterozygous",13,22,59.09,1,13,2,0.13,37.46,15,24,4,7,1.1,0.66,0.8,"no","C/T","No",1,66.46,"NP_001164314.1:c.427A>G","NP_001164314.1:p.Thr143Ala","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1543,"NC_007425.3",6899756,"SNV","C","G","Heterozygous",25,48,52.08,1,17,8,0.32,38,25,53,10,18,-1.75,0.69,0.97,"no","C/G","No",1,200,"NP_001164314.1:c.380G>C","NP_001164314.1:p.Ser127Thr","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1544,"NC_007425.3",6899808,"SNV","G","T","Homozygous",47,47,100,1,33,24,0.42,36.87,57,57,11,24,null,1,1,"no","T/T","No",1,156.54,"NP_001164314.1:c.328C>A","NP_001164314.1:p.Gln110Lys","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1545,"NC_007425.3",6900014,"SNV","A","G","Heterozygous",7,22,31.82,1,0,7,0,40.57,7,22,1,1,0.42,0.26,0.66,"no","A/G","No",1,42.52,"NP_001164314.1:c.122T>C","NP_001164314.1:p.Ile41Thr","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1546,"NC_007425.3","6900018..6900019","MNV","GG","AA","Heterozygous",7,22,31.82,1,0,7,0,41,7,22,1,1,1.94,0.34,0.66,"no","complex","No",1,200,"NP_001164314.1:c.117_118delCCinsTT","NP_001164314.1:p.Pro40Ser","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1547,"NC_007425.3",6900034,"SNV","T","G","Heterozygous",7,21,33.33,1,0,7,0,37,7,21,1,1,-2.61,0.4,0.75,"no","G/T","No",1,46.75,"NP_001164314.1:c.102A>C","NP_001164314.1:p.Lys34Asn","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1548,"NC_007425.3",6928135,"SNV","G","A","Heterozygous",8,21,38.1,1,0,8,0,39.5,8,27,2,4,2.17,0.29,0.3,"no","A/G","No",1,56.49,"XP_008200104.1:c.2336G>A","XP_008200104.1:p.Arg779Lys","LOC659831",659831,null,"659831 [Gene Symbol: LOC659831] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: vacuolar protein sorting-associated protein 16 homolog] [Gene Type: protein-coding]","LOC659831"]
[1549,"NW_015450213.1",4127,"SNV","G","A","Homozygous",20,20,100,1,19,2,0.1,37.9,21,21,9,13,null,1,1,"no","A/A","No",1,82.49,"XP_015839716.1:c.424C>T","XP_015839716.1:p.Arg142*","LOC107398813",107398813,null,"107398813 [Gene Symbol: LOC107398813] [Locus Tag: ] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC107398813] [Gene Type: protein-coding]","LOC107398813"]
[1550,"NW_015450217.1",35663,"SNV","C","T","Heterozygous",13,21,61.9,1,8,9,0.47,38.23,17,25,9,7,0.8,0.46,0.88,"no","C/T","No",1,60.92,"XP_015839721.1:c.[2309C>T]; XP_015839720.1:c.[2309C>T]","XP_015839721.1:p.[Ala770Val]; XP_015839720.1:p.[Ala770Val]","LOC103313487",103313487,null,"103313487 [Gene Symbol: LOC103313487] [Locus Tag: ] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103313487] [Gene Type: protein-coding]","LOC103313487"]
[1551,"NW_015450228.1",3372,"SNV","G","A","Homozygous",20,20,100,1,12,12,0.5,37.65,24,24,9,14,null,1,1,"no","A/A","No",1,82.49,"XP_008201306.2:c.1666C>T","XP_008201306.2:p.Leu556Phe","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1552,"NW_015450228.1",3417,"SNV","T","C","Homozygous",22,22,100,1,10,19,0.34,37.45,29,29,10,11,null,1,1,"no","C/C","No",1,86.89,"XP_008201306.2:c.1621A>G","XP_008201306.2:p.Thr541Ala","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1553,"NW_015450228.1","4360..4361","MNV","TC","CT","Homozygous",30,32,93.75,1,27,11,0.29,38.7,38,42,20,22,null,0.99,1,"no","CT/CT","No",1,200,"XP_008201306.2:c.1510_1511delGAinsAG","XP_008201306.2:p.Asp504Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1554,"NW_015450228.1",4399,"SNV","G","T","Homozygous",41,41,100,1,31,19,0.38,38.66,50,50,22,27,null,1,1,"no","T/T","No",1,142.64,"XP_008201306.2:c.1472C>A","XP_008201306.2:p.Thr491Asn","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1555,"NW_015450228.1",4592,"SNV","C","G","Homozygous",58,62,93.55,1,34,25,0.42,36.88,59,63,25,33,null,1,1,"no","G/G","No",1,129.21,"XP_008201306.2:c.1279G>C","XP_008201306.2:p.Glu427Gln","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1556,"NW_015450228.1",4594,"SNV","T","G","Homozygous",55,57,96.49,1,33,23,0.41,37.18,56,58,23,30,null,1,1,"no","G/G","No",1,130.03,"XP_008201306.2:c.1277A>C","XP_008201306.2:p.Lys426Thr","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1557,"NW_015450228.1","4795..4798","Replacement","ACCC","G","Homozygous",63,66,95.45,1,25,44,0.36,36.48,69,72,35,34,null,1,1,"no","G/G","No",1,200,"XP_008201306.2:c.1073_1076delGGGTinsC","XP_008201306.2:p.Arg358_Val359delinsPro","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1558,"NW_015450228.1",4878,"SNV","G","T","Homozygous",43,46,93.48,1,20,29,0.41,38.72,49,52,18,24,null,0.99,1,"no","T/T","No",1,74.12,"XP_008201306.2:c.993C>A","XP_008201306.2:p.Phe331Leu","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1559,"NW_015450228.1","4960..4961","MNV","CA","GG","Homozygous",42,42,100,1,23,25,0.48,39.01,48,48,25,25,null,1,1,"no","GG/GG","No",1,200,"XP_008201306.2:c.910_911delTGinsCC","XP_008201306.2:p.Cys304Pro","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1560,"NW_015450228.1",5176,"SNV","T","C","Homozygous",69,77,89.61,1,36,37,0.49,38.13,73,81,36,35,null,0.99,1,"no","C/C","No",1,99.56,"XP_008201306.2:c.695A>G","XP_008201306.2:p.Asn232Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1561,"NW_015450228.1",5270,"SNV","T","G","Homozygous",41,45,91.11,1,21,25,0.46,38.1,46,50,19,24,null,0.99,1,"no","G/G","No",1,66.25,"XP_008201306.2:c.601A>C","XP_008201306.2:p.Ile201Leu","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1562,"NW_015450228.1",5279,"SNV","A","G","Homozygous",49,49,100,1,20,34,0.37,37.82,54,54,23,26,null,1,1,"no","G/G","No",1,159.55,"XP_008201306.2:c.592T>C","XP_008201306.2:p.Tyr198His","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1563,"NW_015450228.1",5461,"SNV","C","G","Homozygous",47,47,100,1,20,29,0.41,39.15,49,49,25,24,null,1,1,"no","G/G","No",1,200,"XP_008201306.2:c.410G>C","XP_008201306.2:p.Gly137Ala","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1564,"NW_015450228.1",5498,"SNV","T","C","Homozygous",38,38,100,1,25,16,0.39,38.89,41,41,17,21,null,1,1,"no","C/C","No",1,135.03,"XP_008201306.2:c.373A>G","XP_008201306.2:p.Ile125Val","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1565,"NW_015450228.1",5582,"SNV","G","A","Homozygous",36,37,97.3,1,23,18,0.44,36.69,41,43,21,20,null,1,1,"no","A/A","No",1,91.19,"XP_008201306.2:c.289C>T","XP_008201306.2:p.Gln97*","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1566,"NW_015450228.1",5615,"SNV","G","A","Homozygous",45,45,100,1,25,27,0.48,36.91,52,52,22,22,null,1,1,"no","A/A","No",1,153.53,"XP_008201306.2:c.256C>T","XP_008201306.2:p.Pro86Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1567,"NW_015450228.1",5627,"SNV","C","T","Homozygous",45,49,91.84,1,23,26,0.47,37.2,49,55,24,23,null,1,1,"no","T/T","No",1,70.93,"XP_008201306.2:c.244G>A","XP_008201306.2:p.Glu82Lys","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1568,"NW_015450228.1","5708^5709","Insertion","-","G","Homozygous",26,26,100,1,9,20,0.31,38.42,29,29,13,17,null,1,1,"no","G/G","No",1,98.93,"XP_008201306.2:c.162_163insC","XP_008201306.2:p.Arg55fs","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1569,"NW_015450232.1",425124,"Deletion","T","-","Heterozygous",5,20,25,0.99,5,0,0,39.6,5,20,2,3,-0.31,0.26,0.72,"no","-/T","No",1,19.82,"XP_015839742.1:c.[6900delT]; XP_015839740.1:c.[7890delT]; XP_015839739.1:c.[8028delT]; XP_008193367.1:c.[8037delT]; XP_015839741.1:c.[7863delT]; XP_015839743.1:c.[6504delT]","XP_015839742.1:p.[Tyr2301fs]; XP_015839740.1:p.[Tyr2631fs]; XP_015839739.1:p.[Tyr2677fs]; XP_008193367.1:p.[Tyr2680fs]; XP_015839741.1:p.[Tyr2622fs]; XP_015839743.1:p.[Tyr2169fs]","LOC655486",655486,null,"655486 [Gene Symbol: LOC655486] [Locus Tag: TcasGA2_TC031801] [Chromosome: Un] [Map Location: ] [Description: ABC transporter A family member 1] [Gene Type: protein-coding]","LOC655486; TcasGA2_TC031801"]
[1570,"NW_015450233.1",318294,"SNV","G","T","Heterozygous",5,20,25,0.98,0,5,0,34.2,5,26,3,1,-1.53,0.24,0.44,"no","G/T","No",1,16.33,"XP_015839842.1:c.[254+6531C>A]; XP_967958.1:c.[536G>T]; XP_008198753.2:c.[254+6531C>A]","XP_967958.1:p.Arg179Leu","LOC656242, LOC656326","656242 , 656326",null,"656242 [Gene Symbol: LOC656242] [Locus Tag: TcasGA2_TC011104] [Chromosome: LG10] [Map Location: ] [Description: spineless] [Gene Type: protein-coding] || 656326 [Gene Symbol: LOC656326] [Locus Tag: TcasGA2_TC011373] [Chromosome: LG10] [Map Location: ] [Description: cytochrome b-c1 complex subunit Rieske, mitochondrial] [Gene Type: protein-coding]","Ss; TcasGA2_TC011104; LOC656242 || TcasGA2_TC011373; LOC656326"]
[1571,"NW_015450233.1",404665,"SNV","G","A","Heterozygous",16,29,55.17,1,0,16,0,35.75,16,29,5,7,-2.19,0.71,0.29,"no","A/G","No",1,99.64,"XP_008198758.1:c.[344C>T]; XP_008198757.1:c.[374C>T]","XP_008198758.1:p.[Ala115Val]; XP_008198757.1:p.[Ala125Val]","LOC100142406",100142406,null,"100142406 [Gene Symbol: LOC100142406] [Locus Tag: TcasGA2_TC011100] [Chromosome: LG10] [Map Location: ] [Description: probable ATP-dependent RNA helicase YTHDC2] [Gene Type: protein-coding]","bgcn; TcasGA2_TC011100; LOC100142406"]
[1572,"NW_015450233.1",416151,"SNV","A","T","Homozygous",20,20,100,1,9,13,0.41,37.9,22,22,10,8,null,1,1,"no","T/T","No",1,82.52,"XP_008198760.1:c.1078T>A","XP_008198760.1:p.Ser360Thr","LOC657242",657242,null,"657242 [Gene Symbol: LOC657242] [Locus Tag: TcasGA2_TC011099] [Chromosome: LG10] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","LOC657242; TcasGA2_TC011099"]
[1573,"NW_015450233.1",500176,"SNV","C","G","Heterozygous",7,23,30.43,1,0,7,0,36.86,7,23,2,3,0.33,0.05,0.03,"no","C/G","No",1,38.54,"XP_969311.1:c.446C>G","XP_969311.1:p.Pro149Arg","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1574,"NW_015450233.1",500238,"SNV","T","C","Heterozygous",8,21,38.1,1,3,5,0.38,39.5,8,28,2,6,2.72,0.09,0.99,"no","C/T","No",1,60.92,"XP_969311.1:c.508T>C","XP_969311.1:p.Ser170Pro","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1575,"NW_015450233.1",500248,"SNV","T","C","Heterozygous",8,25,32,1,3,5,0.38,38.62,8,32,2,6,2.68,0.09,1,"no","C/T","No",1,49.76,"XP_969311.1:c.518T>C","XP_969311.1:p.Leu173Pro","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1576,"NW_015450233.1","500966..500967","MNV","CA","TG","Heterozygous",13,28,46.43,1,9,6,0.4,36.88,15,37,7,9,-1.93,0.94,0.83,"no","complex","No",1,200,"XP_969311.1:c.1236_1237delCAinsTG","XP_969311.1:p.Arg413Gly","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1577,"NW_015450233.1",504475,"SNV","A","G","Heterozygous",16,23,69.57,1,4,12,0.25,37.94,16,25,6,8,1.7,0.82,0.64,"no","A/G","No",1,38.2,"XP_969311.1:c.4283A>G","XP_969311.1:p.Lys1428Arg","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1578,"NW_015450233.1",526591,"SNV","A","G","Heterozygous",12,22,54.55,1,8,9,0.47,35.5,17,27,4,7,-0.82,0.31,1,"no","A/G","No",1,79.14,"XP_008198771.1:c.356T>C","XP_008198771.1:p.Val119Ala","LOC103314450",103314450,null,"103314450 [Gene Symbol: LOC103314450] [Locus Tag: TcasGA2_TC011094] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314450; TcasGA2_TC011094"]
[1579,"NW_015450233.1",526622,"SNV","C","T","Heterozygous",11,21,52.38,1,4,11,0.27,36.82,15,28,3,6,0.39,0.1,0.94,"no","C/T","No",1,83.32,"XP_008198771.1:c.325G>A","XP_008198771.1:p.Asp109Asn","LOC103314450",103314450,null,"103314450 [Gene Symbol: LOC103314450] [Locus Tag: TcasGA2_TC011094] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314450; TcasGA2_TC011094"]
[1580,"NW_015450233.1",549925,"SNV","T","A","Heterozygous",5,24,20.83,0.91,5,4,0.44,35,9,31,3,2,-1.63,0.1,0.81,"no","A/T","No",1,10.28,"XP_008198772.1:c.[41-10722A>T]; XP_970103.1:c.[124T>A]","XP_970103.1:p.Tyr42Asn","LOC658334, LOC658645","658334 , 658645",null,"658334 [Gene Symbol: LOC658334] [Locus Tag: TcasGA2_TC011092] [Chromosome: LG10] [Map Location: ] [Description: xaa-Pro aminopeptidase 1] [Gene Type: protein-coding] || 658645 [Gene Symbol: LOC658645] [Locus Tag: TcasGA2_TC011385] [Chromosome: LG10] [Map Location: ] [Description: catalase] [Gene Type: protein-coding]","TcasGA2_TC011092; LOC658334 || LOC658645; TcasGA2_TC011385"]
[1581,"NW_015450233.1",559022,"SNV","A","T","Homozygous",20,20,100,1,14,12,0.46,38.3,26,26,9,13,null,1,1,"no","T/T","No",1,82.52,"XP_008198733.1:c.[142T>A]; XP_008198772.1:c.[40+7419T>A]","XP_008198733.1:p.*48Lys","LOC658334, LOC658708","658334 , 658708",null,"658334 [Gene Symbol: LOC658334] [Locus Tag: TcasGA2_TC011092] [Chromosome: LG10] [Map Location: ] [Description: xaa-Pro aminopeptidase 1] [Gene Type: protein-coding] || 658708 [Gene Symbol: LOC658708] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: catalase-like] [Gene Type: protein-coding]","TcasGA2_TC011092; LOC658334 || LOC658708"]
[1582,"NW_015450233.1",592516,"SNV","C","A","Homozygous",28,28,100,1,15,23,0.39,36.46,38,38,8,14,null,1,1,"no","A/A","No",1,106.56,"XP_970294.2:c.[2927G>T]; XP_008198775.1:c.[2816G>T]; XP_008198774.1:c.[2837G>T]","XP_970294.2:p.[Ser976Ile]; XP_008198775.1:p.[Ser939Ile]; XP_008198774.1:p.[Ser946Ile]","LOC658848",658848,null,"658848 [Gene Symbol: LOC658848] [Locus Tag: TcasGA2_TC011087] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC658848] [Gene Type: protein-coding]","LOC658848; TcasGA2_TC011087"]
[1583,"NW_015450233.1",600177,"SNV","T","C","Homozygous",22,22,100,1,20,9,0.31,38.32,29,29,9,15,null,1,1,"no","C/C","No",1,86.9,"XP_970294.2:c.[142-1438A>G]; XP_008198774.1:c.[23A>G]","XP_008198774.1:p.Lys8Arg","LOC658848",658848,null,"658848 [Gene Symbol: LOC658848] [Locus Tag: TcasGA2_TC011087] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC658848] [Gene Type: protein-coding]","LOC658848; TcasGA2_TC011087"]
[1584,"NW_015450233.1",614589,"SNV","T","C","Heterozygous",10,20,50,1,7,6,0.46,38.4,13,24,4,9,0.49,0.87,0.91,"no","C/T","No",1,82.49,"XP_970426.1:c.[623T>C]; XP_015839840.1:c.[623T>C]","XP_970426.1:p.[Val208Ala]; XP_015839840.1:p.[Val208Ala]","LOC658992",658992,null,"658992 [Gene Symbol: LOC658992] [Locus Tag: TcasGA2_TC011388] [Chromosome: LG10] [Map Location: ] [Description: dynactin subunit 4] [Gene Type: protein-coding]","Dctn4; TcasGA2_TC011388; p62; LOC658992"]
[1585,"NW_015450233.1",614605,"SNV","G","C","Heterozygous",11,21,52.38,1,4,11,0.27,37.09,15,27,5,7,-1.16,0.7,1,"no","C/G","No",1,82.24,"XP_970426.1:c.[639G>C]; XP_015839840.1:c.[639G>C]","XP_970426.1:p.[Glu213Asp]; XP_015839840.1:p.[Glu213Asp]","LOC658992",658992,null,"658992 [Gene Symbol: LOC658992] [Locus Tag: TcasGA2_TC011388] [Chromosome: LG10] [Map Location: ] [Description: dynactin subunit 4] [Gene Type: protein-coding]","Dctn4; TcasGA2_TC011388; p62; LOC658992"]
[1586,"NW_015450233.1",707980,"SNV","G","T","Heterozygous",6,25,24,0.97,6,0,0,37.17,6,25,1,5,-1.34,0.37,0.43,"no","G/T","No",1,15.17,"XP_008198781.1:c.[743G>T]; XP_015839864.1:c.[743G>T]","XP_008198781.1:p.[Gly248Val]; XP_015839864.1:p.[Gly248Val]","LOC659298",659298,null,"659298 [Gene Symbol: LOC659298] [Locus Tag: TcasGA2_TC011391] [Chromosome: LG10] [Map Location: ] [Description: chondroitin sulfate N-acetylgalactosaminyltransferase 1] [Gene Type: protein-coding]","TcasGA2_TC011391; LOC659298"]
[1587,"NW_015450233.1",792029,"SNV","A","G","Homozygous",24,24,100,1,19,13,0.41,36.38,32,32,6,15,null,1,1,"no","G/G","No",1,92.92,"XP_015839811.1:c.[4288A>G]; XP_015839816.1:c.[4288A>G]; XP_015839827.1:c.[449-894A>G]; XP_015839826.1:c.[4288A>G]; XP_015839824.1:c.[3838A>G]; XP_015839823.1:c.[3838A>G]; XP_015839812.1:c.[4288A>G]; XP_015839818.1:c.[4288A>G]; XP_015839821.1:c.[3955A>G]; XP_015839814.1:c.[4288A>G]; XP_015839829.1:c.[151+4068A>G]; XP_015839820.1:c.[4288A>G]; XP_015839825.1:c.[4288A>G]; XP_015839819.1:c.[4288A>G]; XP_015839817.1:c.[4288A>G]; XP_015839828.1:c.[448+4068A>G]; XP_015839815.1:c.[4288A>G]; XP_015839813.1:c.[4279A>G]","XP_015839811.1:p.[Ile1430Val]; XP_015839816.1:p.[Ile1430Val]; XP_015839826.1:p.[Ile1430Val]; XP_015839824.1:p.[Ile1280Val]; XP_015839823.1:p.[Ile1280Val]; XP_015839812.1:p.[Ile1430Val]; XP_015839818.1:p.[Ile1430Val]; XP_015839821.1:p.[Ile1319Val]; XP_015839814.1:p.[Ile1430Val]; XP_015839820.1:p.[Ile1430Val]; XP_015839825.1:p.[Ile1430Val]; XP_015839819.1:p.[Ile1430Val]; XP_015839817.1:p.[Ile1430Val]; XP_015839815.1:p.[Ile1430Val]; XP_015839813.1:p.[Ile1427Val]","LOC659365",659365,null,"659365 [Gene Symbol: LOC659365] [Locus Tag: TcasGA2_TC011393] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC659365] [Gene Type: protein-coding]","LOC659365; TcasGA2_TC011393"]
[1588,"NW_015450233.1",801003,"SNV","C","T","Homozygous",20,20,100,1,9,14,0.39,39.55,23,23,9,10,null,1,1,"no","T/T","No",1,82.52,"XP_015839830.1:c.[1792C>T]; XP_015839825.1:c.[6973C>T]; XP_015839814.1:c.[6964C>T]; XP_015839812.1:c.[6973C>T]; XP_015839824.1:c.[6523C>T]; XP_015839811.1:c.[6973C>T]; XP_015839818.1:c.[6907C>T]; XP_015839813.1:c.[6964C>T]; XP_015839821.1:c.[6640C>T]; XP_015839827.1:c.[2323C>T]; XP_015839829.1:c.[1897C>T]; XP_015839817.1:c.[6940C>T]; XP_015839815.1:c.[6973C>T]; XP_015839820.1:c.[6844C>T]; XP_015839816.1:c.[6973C>T]; XP_015839819.1:c.[6874C>T]; XP_015839823.1:c.[6523C>T]; XP_015839826.1:c.[6973C>T]; XP_015839828.1:c.[2194C>T]","XP_015839830.1:p.[Pro598Ser]; XP_015839825.1:p.[Pro2325Ser]; XP_015839814.1:p.[Pro2322Ser]; XP_015839812.1:p.[Pro2325Ser]; XP_015839824.1:p.[Pro2175Ser]; XP_015839811.1:p.[Pro2325Ser]; XP_015839818.1:p.[Pro2303Ser]; XP_015839813.1:p.[Pro2322Ser]; XP_015839821.1:p.[Pro2214Ser]; XP_015839827.1:p.[Pro775Ser]; XP_015839829.1:p.[Pro633Ser]; XP_015839817.1:p.[Pro2314Ser]; XP_015839815.1:p.[Pro2325Ser]; XP_015839820.1:p.[Pro2282Ser]; XP_015839816.1:p.[Pro2325Ser]; XP_015839819.1:p.[Pro2292Ser]; XP_015839823.1:p.[Pro2175Ser]; XP_015839826.1:p.[Pro2325Ser]; XP_015839828.1:p.[Pro732Ser]","LOC659365",659365,null,"659365 [Gene Symbol: LOC659365] [Locus Tag: TcasGA2_TC011393] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC659365] [Gene Type: protein-coding]","LOC659365; TcasGA2_TC011393"]
[1589,"NW_015450233.1","856444^856445","Insertion","-","CGC","Homozygous",20,21,95.24,1,18,3,0.14,34.12,21,22,7,12,null,1,1,"no","CGC/CGC","No",1,200,"XP_015839835.1:c.[1114_1115insCGC]; XP_015839836.1:c.[985_986insCGC]","XP_015839835.1:p.[Pro376_Asn377insPro]; XP_015839836.1:p.[Pro333_Asn334insPro]","LOC659629",659629,null,"659629 [Gene Symbol: LOC659629] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: protein lap4-like] [Gene Type: protein-coding]","LOC659629"]
[1590,"NW_015450233.1",880057,"SNV","T","A","Homozygous",21,21,100,1,16,12,0.43,37.14,28,28,8,13,null,1,1,"no","A/A","No",1,85.5,"XP_015839850.1:c.[1434T>A]; XP_015839851.1:c.[1434T>A]","XP_015839850.1:p.[Asp478Glu]; XP_015839851.1:p.[Asp478Glu]","LOC100141580",100141580,null,"100141580 [Gene Symbol: LOC100141580] [Locus Tag: TcasGA2_TC011399] [Chromosome: LG10] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100141580; TcasGA2_TC011399"]
[1591,"NW_015450265.1",8973,"SNV","G","C","Heterozygous",5,22,22.73,0.98,4,1,0.2,39.6,5,24,3,4,1.1,0.09,0.91,"no","C/G","No",1,16.13,"XP_015839878.1:c.[7C>G]; XP_015839879.1:c.[7C>G]; XP_015839877.1:c.[7C>G]","XP_015839878.1:p.[Pro3Ala]; XP_015839879.1:p.[Pro3Ala]; XP_015839877.1:p.[Pro3Ala]","LOC107398856",107398856,null,"107398856 [Gene Symbol: LOC107398856] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398856] [Gene Type: protein-coding]","LOC107398856"]
[1592,"NW_015450289.1",64291,"SNV","G","T","Heterozygous",5,22,22.73,0.92,5,0,0,37.8,5,29,1,3,0.9,0.27,0.33,"no","G/T","No",1,10.99,"XP_008190865.1:c.3331G>T","XP_008190865.1:p.Asp1111Tyr","LOC655982",655982,null,"655982 [Gene Symbol: LOC655982] [Locus Tag: TcasGA2_TC001977] [Chromosome: Un] [Map Location: ] [Description: indole-3-acetaldehyde oxidase] [Gene Type: protein-coding]","LOC655982; TcasGA2_TC001977"]
[1593,"NW_015450289.1",157044,"SNV","C","A","Heterozygous",5,22,22.73,0.92,5,0,0,39.6,5,24,1,5,1.72,0.27,0.54,"no","A/C","No",1,11.13,"XP_015839885.1:c.[1109C>A]; XP_015839884.1:c.[1061C>A]; XP_015839883.1:c.[1109C>A]","XP_015839885.1:p.[Pro370His]; XP_015839884.1:p.[Pro354His]; XP_015839883.1:p.[Pro370His]","LOC656314",656314,null,"656314 [Gene Symbol: LOC656314] [Locus Tag: TcasGA2_TC031834] [Chromosome: Un] [Map Location: ] [Description: very low-density lipoprotein receptor] [Gene Type: protein-coding]","LOC656314; TcasGA2_TC031834"]
[1594,"NW_015450366.1",2793,"SNV","A","G","Heterozygous",21,33,63.64,1,4,20,0.17,38.86,24,36,7,11,0.28,0.17,0.66,"no","A/G","No",1,73.92,"XP_015839906.1:c.[568A>G]; XP_015839907.1:c.[568A>G]; XP_015839908.1:c.[568A>G]","XP_015839906.1:p.[Lys190Glu]; XP_015839907.1:p.[Lys190Glu]; XP_015839908.1:p.[Lys190Glu]","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1595,"NW_015450366.1",2931,"SNV","A","G","Heterozygous",45,60,75,1,32,24,0.43,37.87,56,74,25,28,-1.41,0.96,1,"no","A/G","No",1,36.97,"XP_015839906.1:c.[706A>G]; XP_015839907.1:c.[603+103A>G]; XP_015839908.1:c.[603+103A>G]","XP_015839906.1:p.Ile236Val","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1596,"NW_015450366.1",2934,"SNV","A","G","Heterozygous",47,60,78.33,0.93,29,35,0.45,38.36,64,81,25,27,-1.61,0.99,1,"no","A/G","No",1,11.79,"XP_015839907.1:c.[603+106A>G]; XP_015839906.1:c.[709A>G]; XP_015839908.1:c.[603+106A>G]","XP_015839906.1:p.Lys237Glu","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1597,"NW_015450366.1",2952,"SNV","G","C","Heterozygous",41,54,75.93,1,27,31,0.47,38.24,58,75,22,25,0.99,0.99,1,"no","C/G","No",1,28.84,"XP_015839908.1:c.[603+124G>C]; XP_015839907.1:c.[603+124G>C]; XP_015839906.1:c.[727G>C]","XP_015839906.1:p.Ala243Pro","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1598,"NW_015450366.1",2961,"SNV","C","T","Heterozygous",15,59,25.42,1,7,13,0.35,38.47,20,79,6,10,-0.42,0.29,0.77,"no","C/T","No",1,39.75,"XP_015839907.1:c.[603+133C>T]; XP_015839908.1:c.[603+133C>T]; XP_015839906.1:c.[736C>T]","XP_015839906.1:p.Pro246Ser","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1599,"NW_015450366.1",2986,"SNV","T","G","Heterozygous",14,57,24.56,1,3,12,0.2,37.57,15,73,5,10,-0.25,0.1,0.29,"no","G/T","No",1,35.83,"XP_015839906.1:c.[761T>G]; XP_015839907.1:c.[603+158T>G]; XP_015839908.1:c.[603+158T>G]","XP_015839906.1:p.Met254Arg","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1600,"NW_015450366.1",2998,"SNV","A","C","Homozygous",42,43,97.67,1,27,30,0.47,37.38,57,58,25,25,null,1,1,"no","C/C","No",1,116.3,"XP_015839907.1:c.[603+170A>C]; XP_015839908.1:c.[603+170A>C]; XP_015839906.1:c.[773A>C]","XP_015839906.1:p.*258Ser","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1601,"NW_015450366.1",4733,"SNV","C","T","Heterozygous",9,27,33.33,1,4,8,0.33,37.89,12,31,4,6,0.46,0.18,0.91,"no","C/T","No",1,52.44,"XP_015839908.1:c.[604-738C>T]; XP_015839907.1:c.[697C>T]","XP_015839907.1:p.His233Tyr","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1602,"NW_015450423.1",6900,"SNV","C","A","Homozygous",23,23,100,1,16,7,0.3,37.52,23,23,12,12,null,1,1,"no","A/A","No",1,91.52,"XP_001810019.1:c.[2309G>T]; XP_015839912.1:c.[2309G>T]; XP_008200991.1:c.[2309G>T]","XP_001810019.1:p.[Arg770Met]; XP_015839912.1:p.[Arg770Met]; XP_008200991.1:p.[Arg770Met]","LOC100142044",100142044,null,"100142044 [Gene Symbol: LOC100142044] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142044] [Gene Type: protein-coding]","LOC100142044"]
[1603,"NW_015450445.1",765,"SNV","A","C","Homozygous",24,24,100,1,19,10,0.34,38.54,29,29,11,12,null,1,1,"no","C/C","No",1,92.92,"XP_008194639.1:c.318A>C","XP_008194639.1:p.Gln106His","LOC103313364",103313364,null,"103313364 [Gene Symbol: LOC103313364] [Locus Tag: TcasGA2_TC016044] [Chromosome: Un] [Map Location: ] [Description: TLR4 interactor with leucine rich repeats] [Gene Type: protein-coding]","TcasGA2_TC016044; LOC103313364"]
[1604,"NW_015450445.1",886,"SNV","T","C","Homozygous",26,26,100,1,7,19,0.27,37.46,26,26,14,15,null,1,1,"no","C/C","No",1,98.93,"XP_008194639.1:c.439T>C","XP_008194639.1:p.Phe147Leu","LOC103313364",103313364,null,"103313364 [Gene Symbol: LOC103313364] [Locus Tag: TcasGA2_TC016044] [Chromosome: Un] [Map Location: ] [Description: TLR4 interactor with leucine rich repeats] [Gene Type: protein-coding]","TcasGA2_TC016044; LOC103313364"]
[1605,"NW_015450462.1","11547^11548","Insertion","-","T","Homozygous",37,37,100,1,28,19,0.4,37.57,47,47,16,24,null,1,1,"no","T/T","No",1,133.69,"XP_015839928.1:c.299_300insT","XP_015839928.1:p.Arg101fs","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1606,"NW_015450462.1","11736^11737","Insertion","-","G","Homozygous",22,24,91.67,1,14,13,0.48,38.73,27,29,11,15,null,0.99,1,"no","G/G","No",1,29.95,"XP_015839928.1:c.488_489insG","XP_015839928.1:p.Arg164fs","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1607,"NW_015450462.1",12310,"SNV","T","C","Homozygous",21,21,100,1,15,11,0.42,37.33,26,26,13,14,null,1,1,"no","C/C","No",1,83.89,"XP_015839928.1:c.871T>C","XP_015839928.1:p.*291Gln","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1608,"NW_015450462.1",12572,"SNV","G","A","Homozygous",22,22,100,1,15,7,0.32,34.5,22,22,12,13,null,1,1,"no","A/A","No",1,79.48,"XP_015839928.1:c.1133G>A","XP_015839928.1:p.Arg378His","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1609,"NW_015450462.1",12661,"SNV","G","A","Homozygous",41,41,100,1,16,34,0.32,38.29,50,50,14,21,null,1,1,"no","A/A","No",1,145.74,"XP_015839928.1:c.1222G>A","XP_015839928.1:p.Gly408Ser","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1610,"NW_015450462.1",12713,"SNV","G","A","Homozygous",23,23,100,1,6,17,0.26,39.22,23,23,8,12,null,1,1,"no","A/A","No",1,91.51,"XP_015839928.1:c.1274G>A","XP_015839928.1:p.Arg425Gln","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1611,"NW_015450462.1","16948..16949","Deletion","GT","-","Heterozygous",23,37,62.16,1,8,16,0.33,35.7,24,40,11,14,-1.98,0.97,0.98,"no","complex","No",1,200,"XP_015839928.1:c.1508_1509delGT","XP_015839928.1:p.Val504fs","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1612,"NW_015450462.1",17615,"SNV","G","A","Heterozygous",22,41,53.66,1,13,14,0.48,34.95,27,57,8,10,-3.4,0.82,1,"no","A/G","No",1,142.92,"XP_015839928.1:c.1897G>A","XP_015839928.1:p.Ala633Thr","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1613,"NW_015450462.1",18281,"SNV","G","A","Heterozygous",9,20,45,1,0,9,0,39.22,9,23,2,3,1.71,0.09,0.25,"no","A/G","No",1,71.97,"XP_015839928.1:c.2563G>A","XP_015839928.1:p.Ala855Thr","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1614,"NW_015450462.1",18291,"SNV","C","A","Heterozygous",6,24,25,0.98,0,6,0,39.67,6,27,1,2,2.93,0.04,0.34,"no","A/C","No",1,18.02,"XP_015839928.1:c.2573C>A","XP_015839928.1:p.Ser858*","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1615,"NW_015450462.1",20343,"SNV","C","T","Heterozygous",7,21,33.33,1,3,6,0.33,35.71,9,30,5,4,-0.97,0.93,0.99,"no","C/T","No",1,43.79,"XP_015839928.1:c.2932C>T","XP_015839928.1:p.Arg978*","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1616,"NW_015450462.1",21240,"SNV","G","T","Heterozygous",12,27,44.44,1,1,11,0.08,35.67,12,32,5,4,0.05,0.66,0.26,"no","G/T","No",1,86.03,"XP_015839928.1:c.3774G>T","XP_015839928.1:p.Gln1258His","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1617,"NW_015450462.1",21275,"SNV","G","T","Heterozygous",14,25,56,1,7,11,0.39,36.14,18,29,6,10,-3.56,0.36,0.87,"no","G/T","No",1,86.71,"XP_015839928.1:c.3809G>T","XP_015839928.1:p.*1270Leu","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1618,"NW_015450462.1",21339,"SNV","C","A","Heterozygous",9,26,34.62,1,1,8,0.11,37.33,9,27,5,4,-0.67,0.09,0.3,"no","A/C","No",1,50.69,"XP_015839928.1:c.3873C>A","XP_015839928.1:p.Asn1291Lys","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1619,"NW_015450568.1",15362,"SNV","C","A","Heterozygous",15,22,68.18,1,10,11,0.48,36.47,21,30,9,8,-0.42,0.87,0.98,"no","A/C","No",1,44.26,"XP_015839954.1:c.728G>T","XP_015839954.1:p.Ser243Ile","LOC107398907",107398907,null,"107398907 [Gene Symbol: LOC107398907] [Locus Tag: TcasGA2_TC031918] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398907] [Gene Type: protein-coding]","TcasGA2_TC031918; LOC107398907"]
[1620,"NW_015450599.1",12448,"SNV","A","T","Heterozygous",13,22,59.09,1,11,6,0.35,39.85,17,26,5,4,0.63,0.23,0.54,"no","A/T","No",1,66.51,"XP_015839974.1:c.[1203A>T]; XP_008195700.1:c.[783A>T]","XP_015839974.1:p.[Gln401His]; XP_008195700.1:p.[Gln261His]","LOC103313649",103313649,null,"103313649 [Gene Symbol: LOC103313649] [Locus Tag: TcasGA2_TC032692] [Chromosome: Un] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","TcasGA2_TC032692; LOC103313649"]
[1621,"NW_015450627.1",2503,"SNV","A","T","Heterozygous",6,23,26.09,1,5,6,0.45,36.5,11,28,2,4,-1.09,0.22,1,"no","A/T","No",1,25.49,"XP_015839984.1:c.[2783T>A]; XP_015839985.1:c.[2783T>A]","XP_015839984.1:p.[Ile928Lys]; XP_015839985.1:p.[Ile928Lys]","LOC107398926",107398926,null,"107398926 [Gene Symbol: LOC107398926] [Locus Tag: TcasGA2_TC034949] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398926] [Gene Type: protein-coding]","LOC107398926; TcasGA2_TC034949"]
[1622,"NW_015450627.1",2831,"SNV","G","C","Heterozygous",24,30,80,0.81,11,22,0.33,37,33,43,14,16,0.57,0.84,1,"no","C/G","No",1,7.17,"XP_015839984.1:c.[2455C>G]; XP_015839985.1:c.[2455C>G]","XP_015839984.1:p.[His819Asp]; XP_015839985.1:p.[His819Asp]","LOC107398926",107398926,null,"107398926 [Gene Symbol: LOC107398926] [Locus Tag: TcasGA2_TC034949] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398926] [Gene Type: protein-coding]","LOC107398926; TcasGA2_TC034949"]
[1623,"NW_015450627.1",4997,"SNV","C","T","Homozygous",24,26,92.31,1,17,18,0.49,38.96,35,37,14,18,null,1,1,"no","T/T","No",1,34.47,"XP_015839985.1:c.[289G>A]; XP_015839984.1:c.[289G>A]","XP_015839985.1:p.[Asp97Asn]; XP_015839984.1:p.[Asp97Asn]","LOC107398926",107398926,null,"107398926 [Gene Symbol: LOC107398926] [Locus Tag: TcasGA2_TC034949] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398926] [Gene Type: protein-coding]","LOC107398926; TcasGA2_TC034949"]
[1624,"NW_015450678.1",10945,"SNV","C","A","Heterozygous",11,32,34.38,1,0,11,0,36.27,11,32,6,7,0.44,0.2,1,"no","A/C","No",1,59.49,"XP_008193951.1:c.1052G>T","XP_008193951.1:p.Gly351Val","LOC100141955",100141955,null,"100141955 [Gene Symbol: LOC100141955] [Locus Tag: TcasGA2_TC031650] [Chromosome: Un] [Map Location: ] [Description: ORF 1] [Gene Type: protein-coding]","LOC100141955; TcasGA2_TC031650; gag"]
[1625,"NW_015450678.1",11774,"SNV","C","T","Heterozygous",57,241,23.65,1,39,28,0.42,36.33,67,289,17,34,-0.61,0.14,0.8,"no","C/T","No",1,68.07,"XP_008193951.1:c.223G>A","XP_008193951.1:p.Asp75Asn","LOC100141955",100141955,null,"100141955 [Gene Symbol: LOC100141955] [Locus Tag: TcasGA2_TC031650] [Chromosome: Un] [Map Location: ] [Description: ORF 1] [Gene Type: protein-coding]","LOC100141955; TcasGA2_TC031650; gag"]
[1626,"NW_015450679.1",13647,"SNV","T","A","Heterozygous",7,22,31.82,1,1,7,0.12,39.43,8,23,6,6,-1.66,0.02,0.77,"no","A/T","No",1,40.95,"XP_015839988.1:c.400A>T","XP_015839988.1:p.Ser134Cys","LOC107398928",107398928,null,"107398928 [Gene Symbol: LOC107398928] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398928] [Gene Type: protein-coding]","LOC107398928"]
[1627,"NW_015450689.1",76699,"SNV","C","G","Homozygous",19,22,86.36,0.9,14,12,0.46,37.05,26,29,7,11,null,0.95,1,"no","G/G","No",1,10,"XP_015839992.1:c.[447C>G]; XP_968941.1:c.[447C>G]","XP_015839992.1:p.[Asp149Glu]; XP_968941.1:p.[Asp149Glu]","LOC657385",657385,null,"657385 [Gene Symbol: LOC657385] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: NEDD4-binding protein 2] [Gene Type: protein-coding]","LOC657385"]
[1628,"NW_015450712.1",11299,"SNV","C","T","Homozygous",24,24,100,1,14,17,0.45,37.46,31,31,16,16,null,1,1,"no","T/T","No",1,94.55,"XP_015840002.1:c.464G>A","XP_015840002.1:p.Arg155Lys","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1629,"NW_015450712.1",11308,"SNV","G","T","Heterozygous",16,26,61.54,1,9,14,0.39,37.69,23,33,11,11,1.05,0.69,1,"no","G/T","No",1,71.13,"XP_015840002.1:c.455C>A","XP_015840002.1:p.Ser152Tyr","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1630,"NW_015450712.1",11558,"SNV","C","T","Heterozygous",15,26,57.69,1,5,10,0.33,37.33,15,28,5,11,-1.35,0.37,0.76,"no","C/T","No",1,82.52,"XP_015840002.1:c.205G>A","XP_015840002.1:p.Gly69Ser","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1631,"NW_015450712.1",11561,"SNV","C","G","Heterozygous",15,26,57.69,1,5,10,0.33,38.73,15,28,5,11,0.29,0.35,0.76,"no","C/G","No",1,81.56,"XP_015840002.1:c.202G>C","XP_015840002.1:p.Ala68Pro","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1632,"NW_015450712.1","11570^11571","Insertion","-","TGG","Heterozygous",8,26,30.77,1,1,7,0.12,39.38,8,26,4,5,4.43,0.32,0.42,"no","complex","No",1,200,"XP_015840002.1:c.192_193insCCA","XP_015840002.1:p.Pro64_Ser65insPro","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1633,"NW_015450712.1",11659,"SNV","T","A","Heterozygous",14,30,46.67,1,3,13,0.19,39.29,16,34,4,4,0.42,0.07,0.93,"no","A/T","No",1,108.04,"XP_015840002.1:c.104A>T","XP_015840002.1:p.Gln35Leu","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1634,"NW_015450712.1",11704,"SNV","T","A","Heterozygous",7,26,26.92,1,2,7,0.22,36.86,9,38,4,2,-0.95,0.4,0.94,"no","A/T","No",1,29.83,"XP_015840002.1:c.59A>T","XP_015840002.1:p.Lys20Met","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1635,"NW_015450712.1","70039..70040","MNV","AA","GG","Heterozygous",11,22,50,1,3,10,0.23,40.55,13,24,6,6,null,0.2,0.42,"no","complex","No",1,200,"XP_969746.4:c.39_40delTTinsCC","XP_969746.4:p.Phe14Leu","LOC658247",658247,null,"658247 [Gene Symbol: LOC658247] [Locus Tag: TcasGA2_TC010244] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC658247] [Gene Type: protein-coding]","CYP6BR2; CYP6BR3; TcasGA2_TC010244; LOC658247"]
[1636,"NW_015450712.1",166688,"SNV","C","T","Heterozygous",6,22,27.27,1,3,5,0.38,38.17,8,30,4,5,2.43,0.14,0.56,"no","C/T","No",1,28.22,"XP_015839999.1:c.[550C>T]; XP_970556.2:c.[754C>T]; XP_015839998.1:c.[697C>T]","XP_015839999.1:p.[Leu184Phe]; XP_970556.2:p.[Leu252Phe]; XP_015839998.1:p.[Leu233Phe]","LOC659131",659131,null,"659131 [Gene Symbol: LOC659131] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: cytochrome P450 6BK1] [Gene Type: protein-coding]","LOC659131; CYP6BK1"]
[1637,"NW_015450720.1",49895,"SNV","A","C","Heterozygous",25,33,75.76,0.99,17,14,0.45,37.96,31,39,13,17,-1.34,0.97,1,"no","A/C","No",1,18.46,"XP_973868.1:c.2082T>G","XP_973868.1:p.Ile694Met","LOC662692",662692,null,"662692 [Gene Symbol: LOC662692] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: probable RNA-directed DNA polymerase from transposon X-element] [Gene Type: protein-coding]","LOC662692"]
[1638,"NW_015450720.1",50498,"SNV","G","C","Heterozygous",28,62,45.16,1,17,11,0.39,39.11,28,73,10,17,1.51,0.39,1,"no","C/G","No",1,200,"XP_973868.1:c.1479C>G","XP_973868.1:p.His493Gln","LOC662692",662692,null,"662692 [Gene Symbol: LOC662692] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: probable RNA-directed DNA polymerase from transposon X-element] [Gene Type: protein-coding]","LOC662692"]
[1639,"NW_015450720.1",54434,"SNV","A","T","Heterozygous",5,21,23.81,0.99,2,4,0.33,38.8,6,22,5,5,-1.61,0.77,0.81,"no","A/T","No",1,18.33,"XP_015840007.1:c.[856T>A]; XP_015840006.1:c.[910T>A]","XP_015840007.1:p.[Leu286Ile]; XP_015840006.1:p.[Leu304Ile]","LOC107398935",107398935,null,"107398935 [Gene Symbol: LOC107398935] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398935] [Gene Type: protein-coding]","LOC107398935"]
[1640,"NW_015450720.1",62328,"SNV","A","G","Heterozygous",5,23,21.74,0.96,0,5,0,34.8,5,31,1,1,-1.98,0.04,0.18,"no","A/G","No",1,14.39,"XP_015840004.1:c.1567T>C","XP_015840004.1:p.Phe523Leu","LOC107398934",107398934,null,"107398934 [Gene Symbol: LOC107398934] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398934] [Gene Type: protein-coding]","LOC107398934"]
[1641,"NW_015450720.1",63854,"SNV","A","T","Heterozygous",5,20,25,0.99,0,5,0,38,5,25,3,3,-0.13,0.1,0.11,"no","A/T","No",1,21.07,"XP_015840004.1:c.41T>A","XP_015840004.1:p.Phe14Tyr","LOC107398934",107398934,null,"107398934 [Gene Symbol: LOC107398934] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398934] [Gene Type: protein-coding]","LOC107398934"]
[1642,"NW_015450792.1",22291,"SNV","C","A","Heterozygous",14,28,50,1,9,9,0.5,37.79,18,36,4,9,-1.52,0.42,0.96,"no","A/C","No",1,108.28,"XP_015840015.1:c.325C>A","XP_015840015.1:p.Gln109Lys","LOC107398947",107398947,null,"107398947 [Gene Symbol: LOC107398947] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398947] [Gene Type: protein-coding]","LOC107398947"]
[1643,"NW_015450792.1",22570,"SNV","T","C","Heterozygous",10,25,40,1,4,6,0.4,37.8,10,27,5,6,-1.55,0.53,0.73,"no","C/T","No",1,72.54,"XP_015840015.1:c.604T>C","XP_015840015.1:p.Phe202Leu","LOC107398947",107398947,null,"107398947 [Gene Symbol: LOC107398947] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398947] [Gene Type: protein-coding]","LOC107398947"]
[1644,"NW_015450792.1",22630,"SNV","G","A","Heterozygous",14,26,53.85,1,8,9,0.47,39.29,17,30,9,9,0.93,0.78,0.86,"no","A/G","No",1,95.22,"XP_015840015.1:c.664G>A","XP_015840015.1:p.Ala222Thr","LOC107398947",107398947,null,"107398947 [Gene Symbol: LOC107398947] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398947] [Gene Type: protein-coding]","LOC107398947"]
[1645,"NW_015450873.1",1750,"SNV","A","G","Heterozygous",12,26,46.15,1,8,7,0.47,37.75,15,32,6,7,-1.08,0.94,1,"no","A/G","No",1,95.2,"XP_015840030.1:c.214A>G","XP_015840030.1:p.Ser72Gly","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1646,"NW_015450873.1",1784,"SNV","G","C","Heterozygous",11,27,40.74,1,4,8,0.33,40.18,12,34,5,7,1.43,0.24,1,"no","C/G","No",1,78.76,"XP_015840030.1:c.248G>C","XP_015840030.1:p.Gly83Ala","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1647,"NW_015450873.1",2209,"SNV","T","A","Heterozygous",9,31,29.03,1,9,2,0.18,38.22,11,42,6,8,0.35,0.33,0.76,"no","A/T","No",1,41.43,"XP_015840030.1:c.673T>A","XP_015840030.1:p.Tyr225Asn","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1648,"NW_015450873.1",2341,"SNV","C","T","Heterozygous",14,27,51.85,1,6,12,0.33,37.21,18,33,8,6,0.61,0.17,0.87,"no","C/T","No",1,104.91,"XP_015840030.1:c.805C>T","XP_015840030.1:p.Pro269Ser","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1649,"NW_015450873.1",11594,"SNV","T","G","Heterozygous",9,22,40.91,1,5,6,0.45,38.56,11,30,7,6,-0.33,0.25,0.93,"no","G/T","No",1,69.51,"XP_015840026.1:c.805A>C","XP_015840026.1:p.Lys269Gln","LOC103315079",103315079,null,"103315079 [Gene Symbol: LOC103315079] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315079] [Gene Type: protein-coding]","LOC103315079"]
[1650,"NW_015450887.1",4298,"SNV","G","T","Heterozygous",8,21,38.1,1,6,6,0.5,39,12,27,6,4,1.41,0.94,1,"no","G/T","No",1,51.71,"XP_015840032.1:c.665C>A","XP_015840032.1:p.Ala222Asp","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1651,"NW_015450887.1",4325,"SNV","G","A","Heterozygous",6,28,21.43,0.93,2,4,0.33,38.67,6,28,4,3,0.5,0.7,0.59,"no","A/G","No",1,11.73,"XP_015840032.1:c.638C>T","XP_015840032.1:p.Pro213Leu","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1652,"NW_015450887.1",4584,"SNV","T","G","Heterozygous",10,37,27.03,1,9,2,0.18,39.7,11,45,7,8,-1.39,0.27,0.29,"no","G/T","No",1,40.5,"XP_015840032.1:c.379A>C","XP_015840032.1:p.Lys127Gln","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1653,"NW_015450887.1","4928^4929","Insertion","-","T","Heterozygous",6,24,25,0.99,3,3,0.5,38.33,6,26,2,5,-0.13,0.23,1,"no","-/T","No",1,22.3,"XP_015840032.1:c.34_35insA","XP_015840032.1:p.Arg12fs","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1654,"NW_015450887.1",4931,"Deletion","T","-","Heterozygous",20,26,76.92,0.99,10,12,0.45,36.65,22,28,9,12,-1.37,0.81,0.98,"no","-/T","Yes",10,19.44,"XP_015840032.1:c.32delA","XP_015840032.1:p.Asn11fs","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1655,"NW_015450974.1",172962,"SNV","C","G","Homozygous",17,24,70.83,0.88,4,17,0.19,36.71,21,28,5,6,null,0.83,0.96,"no","G/T","No",1,9.11,"XP_008195595.1:c.[1049G>C]; XP_001808877.2:c.[1301G>C]","XP_008195595.1:p.[Cys350Ser]; XP_001808877.2:p.[Cys434Ser]","LOC100142089",100142089,null,"100142089 [Gene Symbol: LOC100142089] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142089] [Gene Type: protein-coding]","LOC100142089"]
[1656,"NW_015450989.1",150870,"SNV","G","A","Homozygous",21,21,100,1,15,13,0.46,39,28,28,11,15,null,1,1,"no","A/A","No",1,85.5,"XP_015840063.1:c.[593G>A]; XP_015840062.1:c.[593G>A]; XP_015840066.1:c.[593G>A]; XP_015840064.1:c.[593G>A]; XP_015840065.1:c.[593G>A]","XP_015840063.1:p.[Arg198Lys]; XP_015840062.1:p.[Arg198Lys]; XP_015840066.1:p.[Arg198Lys]; XP_015840064.1:p.[Arg198Lys]; XP_015840065.1:p.[Arg198Lys]","LOC657056",657056,null,"657056 [Gene Symbol: LOC657056] [Locus Tag: TcasGA2_TC002002] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC657056; TcasGA2_TC002002"]
[1657,"NW_015451036.1",165274,"SNV","C","T","Heterozygous",18,23,78.26,0.96,14,4,0.22,39.06,18,23,6,12,-1.42,0.64,0.69,"no","C/T","No",1,14.42,"XP_008193199.1:c.208C>T","XP_008193199.1:p.Pro70Ser","LOC660633",660633,null,"660633 [Gene Symbol: LOC660633] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: beta-1,4-galactosyltransferase 1] [Gene Type: protein-coding]","LOC660633"]
[1658,"NW_015451036.1",165279,"SNV","G","T","Heterozygous",20,25,80,0.91,16,4,0.2,39.2,20,25,7,13,-0.61,0.74,0.68,"no","G/T","No",1,10.45,"XP_008193199.1:c.213G>T","XP_008193199.1:p.Lys71Asn","LOC660633",660633,null,"660633 [Gene Symbol: LOC660633] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: beta-1,4-galactosyltransferase 1] [Gene Type: protein-coding]","LOC660633"]
[1659,"NW_015451036.1",166001,"SNV","A","T","Heterozygous",16,20,80,0.87,6,13,0.32,37.44,19,26,6,8,1.23,0.98,0.98,"no","A/T","No",1,8.82,"XP_008193199.1:c.627A>T","XP_008193199.1:p.Gln209His","LOC660633",660633,null,"660633 [Gene Symbol: LOC660633] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: beta-1,4-galactosyltransferase 1] [Gene Type: protein-coding]","LOC660633"]
[1660,"NW_015451036.1",168518,"Replacement","A","TG","Heterozygous",18,25,72,1,4,18,0.18,37.33,22,29,8,13,3.85,0.89,1,"no","complex","No",1,200,"XP_008193229.1:c.969delTinsCA","XP_008193229.1:p.Pro324fs","LOC660688",660688,null,"660688 [Gene Symbol: LOC660688] [Locus Tag: TcasGA2_TC031811] [Chromosome: Un] [Map Location: ] [Description: proline-rich extensin-like protein EPR1] [Gene Type: protein-coding]","TcasGA2_TC031811; LOC660688"]
[1661,"NW_015451049.1",112703,"SNV","C","A","Homozygous",24,24,100,1,24,2,0.08,38.71,26,26,12,14,null,1,1,"no","A/A","No",1,94.53,"XP_015840124.1:c.536G>T","XP_015840124.1:p.Trp179Leu","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1662,"NW_015451049.1",112999,"SNV","C","A","Homozygous",31,31,100,1,18,22,0.45,37.81,40,40,16,18,null,1,1,"no","A/A","No",1,115.58,"XP_015840124.1:c.240G>T","XP_015840124.1:p.Gln80His","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1663,"NW_015451049.1",113009,"SNV","T","C","Homozygous",35,35,100,1,22,19,0.46,38.89,41,41,15,21,null,1,1,"no","C/C","No",1,126.02,"XP_015840124.1:c.230A>G","XP_015840124.1:p.Lys77Arg","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1664,"NW_015451049.1",113160,"SNV","C","T","Homozygous",30,35,85.71,0.99,16,24,0.4,35.57,40,45,10,17,null,0.55,0.98,"no","T/T","No",1,19.23,"XP_015840124.1:c.79G>A","XP_015840124.1:p.Ala27Thr","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1665,"NW_015451049.1",113163,"SNV","C","A","Homozygous",32,37,86.49,0.98,15,24,0.38,36.44,39,44,12,20,null,0.82,0.98,"no","A/A","No",1,17.57,"XP_015840124.1:c.76G>T","XP_015840124.1:p.Ala26Ser","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1666,"NW_015451053.1",17503,"SNV","G","C","Heterozygous",19,33,57.58,1,11,13,0.46,36.16,24,40,5,13,0.15,0.7,0.65,"no","C/G","No",1,100.08,"XP_008201338.1:c.1012C>G","XP_008201338.1:p.Pro338Ala","LOC656812",656812,null,"656812 [Gene Symbol: LOC656812] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: pair-rule protein odd-paired] [Gene Type: protein-coding]","LOC656812"]
[1667,"NW_015451053.1",37874,"SNV","T","G","Heterozygous",6,24,25,1,0,6,0,37,6,24,1,2,-1.2,0.18,1,"no","G/T","No",1,25.62,"XP_008201338.1:c.152A>C","XP_008201338.1:p.His51Pro","LOC656812",656812,null,"656812 [Gene Symbol: LOC656812] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: pair-rule protein odd-paired] [Gene Type: protein-coding]","LOC656812"]
[1668,"NW_015451085.1",8127,"SNV","G","A","Homozygous",23,23,100,1,19,10,0.34,37.04,29,29,11,15,null,1,1,"no","A/A","No",1,91.52,"NP_001164097.1:c.271C>T","NP_001164097.1:p.Pro91Ser","Est-6",658475,"esterase 6","658475 [Gene Symbol: Est-6] [Locus Tag: TcasGA2_TC005190] [Chromosome: Un] [Map Location: ] [Description: esterase 6] [Gene Type: protein-coding]","TcasGA2_TC005190; Est-6"]
[1669,"NW_015451146.1",4025,"SNV","C","G","Heterozygous",5,24,20.83,0.94,3,2,0.4,38,5,25,4,5,0.48,0.68,0.84,"no","C/G","No",1,12.34,"XP_008192463.1:c.1798G>C","XP_008192463.1:p.Gly600Arg","LOC103312772",103312772,null,"103312772 [Gene Symbol: LOC103312772] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312772] [Gene Type: protein-coding]","LOC103312772"]
[1670,"NW_015451146.1",5051,"SNV","C","G","Heterozygous",8,37,21.62,0.94,0,8,0,39,8,37,5,6,0.04,0.35,1,"no","C/G","No",1,12.55,"XP_008192463.1:c.772G>C","XP_008192463.1:p.Ala258Pro","LOC103312772",103312772,null,"103312772 [Gene Symbol: LOC103312772] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312772] [Gene Type: protein-coding]","LOC103312772"]
[1671,"NW_015451146.1",10931,"SNV","C","T","Heterozygous",22,40,55,1,6,17,0.26,38.68,23,44,6,11,1.69,0.64,0.98,"no","C/T","No",1,132.73,"XP_015840145.1:c.901G>A","XP_015840145.1:p.Ala301Thr","LOC107399018",107399018,null,"107399018 [Gene Symbol: LOC107399018] [Locus Tag: TcasGA2_TC031710] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399018] [Gene Type: protein-coding]","TcasGA2_TC031710; LOC107399018"]
[1672,"NW_015451146.1",13515,"SNV","A","T","Heterozygous",12,26,46.15,1,5,8,0.38,35.92,13,27,6,4,-3.47,0.14,0.26,"no","A/T","No",1,93.75,"XP_008192464.1:c.998T>A","XP_008192464.1:p.Phe333Tyr","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1673,"NW_015451146.1",13579,"Replacement","G","TA","Heterozygous",7,29,24.14,1,0,7,0,38.36,7,29,2,1,0.18,0.02,0.1,"no","complex","No",1,200,"XP_008192464.1:c.934delCinsTA","XP_008192464.1:p.Leu312fs","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1674,"NW_015451146.1",14065,"SNV","C","A","Heterozygous",9,25,36,1,9,0,0,37.89,9,28,4,6,-0.91,0.07,0.13,"no","A/C","No",1,53.48,"XP_008192464.1:c.448G>T","XP_008192464.1:p.Glu150*","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1675,"NW_015451234.1",12103,"SNV","T","C","Homozygous",22,24,91.67,1,18,6,0.25,37.77,24,26,10,16,null,0.98,1,"no","C/C","No",1,31.05,"XP_008201045.1:c.1123A>G","XP_008201045.1:p.Arg375Gly","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1676,"NW_015451234.1","12111..12112","MNV","TC","CT","Heterozygous",19,27,70.37,1,17,4,0.19,37.63,21,29,11,17,null,0.63,0.98,"no","complex","No",1,200,"XP_008201045.1:c.1114_1115delGAinsAG","XP_008201045.1:p.Glu372Arg","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1677,"NW_015451234.1",12112,"SNV","C","T","Heterozygous",6,27,22.22,1,3,3,0.5,38,6,29,3,4,null,0.07,0.55,"no","complex","No",1,200,"XP_008201045.1:c.1114G>A","XP_008201045.1:p.Glu372Lys","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1678,"NW_015451234.1",12172,"SNV","C","T","Homozygous",33,34,97.06,1,22,18,0.45,37.91,40,41,17,20,null,1,1,"no","T/T","No",1,88.08,"XP_008201045.1:c.1054G>A","XP_008201045.1:p.Gly352Ser","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1679,"NW_015451234.1",12258,"SNV","G","A","Heterozygous",24,36,66.67,1,12,15,0.44,39.42,27,41,12,15,1.66,0.89,0.94,"no","A/G","No",1,67.39,"XP_008201045.1:c.968C>T","XP_008201045.1:p.Thr323Ile","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1680,"NW_015451234.1",12338,"SNV","T","A","Heterozygous",7,30,23.33,0.99,2,5,0.29,37,7,36,5,3,-1.23,0.14,1,"no","A/T","No",1,18.73,"XP_008201045.1:c.888A>T","XP_008201045.1:p.Leu296Phe","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1681,"NW_015451234.1",12355,"SNV","G","C","Heterozygous",6,24,25,1,0,6,0,36.33,6,24,3,2,-1.8,0.54,0.81,"no","C/G","No",1,23.25,"XP_008201045.1:c.871C>G","XP_008201045.1:p.Arg291Gly","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1682,"NW_015451234.1",12358,"SNV","A","G","Homozygous",27,27,100,1,2,25,0.07,37.37,27,27,15,13,null,1,1,"no","G/G","No",1,101.95,"XP_008201045.1:c.868T>C","XP_008201045.1:p.Phe290Leu","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1683,"NW_015451264.1",9263,"SNV","G","A","Heterozygous",7,24,29.17,1,1,7,0.12,37.43,8,25,2,4,-0.79,0.1,0.96,"no","A/G","No",1,35.35,"XP_015840154.1:c.259G>A","XP_015840154.1:p.Ala87Thr","LOC107399024",107399024,null,"107399024 [Gene Symbol: LOC107399024] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399024] [Gene Type: protein-coding]","LOC107399024"]
[1684,"NW_015451351.1",5161,"SNV","T","C","Heterozygous",22,32,68.75,1,9,17,0.35,38.36,26,37,13,14,-0.16,0.95,1,"no","C/T","No",1,51.3,"XP_015840159.1:c.1027A>G","XP_015840159.1:p.Asn343Asp","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[1685,"NW_015451351.1",5467,"SNV","C","G","Homozygous",21,23,91.3,1,12,12,0.5,36.86,24,26,12,13,null,1,1,"no","G/G","No",1,32.15,"XP_015840159.1:c.721G>C","XP_015840159.1:p.Glu241Gln","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[1686,"NW_015451351.1",5500,"SNV","C","T","Heterozygous",11,20,55,1,7,7,0.5,38.64,14,23,5,5,0.57,0.5,1,"no","C/T","No",1,73.66,"XP_015840159.1:c.688G>A","XP_015840159.1:p.Glu230Lys","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[1687,"NW_015451351.1",5543,"SNV","T","A","Homozygous",22,25,88,0.99,16,9,0.36,37,25,30,12,12,null,0.93,1,"no","A/A","No",1,18.51,"XP_015840159.1:c.645A>T","XP_015840159.1:p.Lys215Asn","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[1688,"NW_015451432.1",144858,"SNV","C","A","Heterozygous",5,21,23.81,0.96,5,1,0.17,39.8,6,23,2,2,0.08,0.09,0.31,"no","A/C","No",1,13.75,"XP_015840165.1:c.177C>A","XP_015840165.1:p.Asp59Glu","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[1689,"NW_015451432.1",144952,"SNV","G","C","Heterozygous",7,21,33.33,1,2,7,0.22,39.29,9,25,3,3,1.27,0.43,0.94,"no","C/G","No",1,44.36,"XP_015840165.1:c.271G>C","XP_015840165.1:p.Glu91Gln","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[1690,"NW_015451432.1",145007,"SNV","A","T","Heterozygous",8,27,29.63,1,8,1,0.11,39,9,34,7,5,0.9,0.18,0.18,"no","A/T","No",1,39.86,"XP_015840165.1:c.326A>T","XP_015840165.1:p.Lys109Ile","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[1691,"NW_015451432.1",145201,"SNV","T","G","Heterozygous",7,23,30.43,1,3,6,0.33,39.86,9,35,5,5,2.57,0.99,0.84,"no","G/T","No",1,41.16,"XP_015840165.1:c.520T>G","XP_015840165.1:p.Tyr174Asp","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[1692,"NW_015451432.1",145214,"SNV","A","G","Heterozygous",9,34,26.47,1,5,6,0.45,38.33,11,45,6,6,0.41,0.92,0.93,"no","A/G","No",1,34.62,"XP_015840165.1:c.533A>G","XP_015840165.1:p.Tyr178Cys","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[1693,"NW_015451507.1",10812,"SNV","G","A","Heterozygous",8,27,29.63,1,8,3,0.27,36.5,11,31,4,5,-0.69,0.44,0.96,"no","A/G","No",1,39.75,"XP_015840220.1:c.199G>A","XP_015840220.1:p.Ala67Thr","LOC100142188",100142188,null,"100142188 [Gene Symbol: LOC100142188] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142188] [Gene Type: protein-coding]","LOC100142188"]
[1694,"NW_015451514.1",2070,"SNV","G","C","Heterozygous",8,35,22.86,0.98,8,0,0,38.38,8,40,3,7,-0.57,0.02,0.03,"no","C/G","No",1,18.2,"XP_015840230.1:c.[668C>G]; XP_015840231.1:c.[614C>G]","XP_015840230.1:p.[Ser223Cys]; XP_015840231.1:p.[Ser205Cys]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[1695,"NW_015451514.1",3056,"SNV","G","T","Heterozygous",26,35,74.29,1,11,17,0.39,38.46,28,37,12,15,-0.23,0.81,0.74,"no","G/T","No",1,33.24,"XP_015840230.1:c.[49C>A]; XP_015840231.1:c.[49C>A]","XP_015840230.1:p.[Arg17Ser]; XP_015840231.1:p.[Arg17Ser]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[1696,"NW_015451514.1",10095,"SNV","T","C","Homozygous",23,23,100,1,18,7,0.28,38.26,25,25,12,12,null,1,1,"no","C/C","No",1,89.91,"XP_008198617.1:c.[199A>G]; XP_008198667.1:c.[199A>G]","XP_008198617.1:p.[Ile67Val]; XP_008198667.1:p.[Ile67Val]","LOC100141865",100141865,null,"100141865 [Gene Symbol: LOC100141865] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100141865] [Gene Type: protein-coding]","LOC100141865"]
[1697,"NW_015451597.1",5317,"Deletion","A","-","Heterozygous",18,24,75,0.99,9,9,0.5,36.28,18,24,9,7,-1.37,0.96,1,"no","-/A","Yes",5,22.72,"XP_015840241.1:c.1207delA","XP_015840241.1:p.Asn404fs","LOC107399075",107399075,null,"107399075 [Gene Symbol: LOC107399075] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399075] [Gene Type: protein-coding]","LOC107399075"]
[1698,"NW_015451620.1",32175,"SNV","C","T","Homozygous",25,25,100,1,24,1,0.04,37.68,25,25,9,14,null,1,1,"no","T/T","No",1,97.56,"XP_969078.1:c.[824G>A]; XP_015840245.1:c.[18+3124C>T]","XP_969078.1:p.Arg275Gln","LOC103314469, LOC657529","103314469 , 657529",null,"103314469 [Gene Symbol: LOC103314469] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314469] [Gene Type: protein-coding] || 657529 [Gene Symbol: LOC657529] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: WD repeat-containing protein 63] [Gene Type: protein-coding]","LOC103314469 || LOC657529"]
[1699,"NW_015451620.1",32902,"SNV","T","C","Homozygous",20,20,100,1,10,10,0.5,34.6,20,20,6,12,null,1,1,"no","C/C","No",1,80.88,"XP_015840245.1:c.[18+3851T>C]; XP_969078.1:c.[97A>G]","XP_969078.1:p.Lys33Glu","LOC103314469, LOC657529","103314469 , 657529",null,"103314469 [Gene Symbol: LOC103314469] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314469] [Gene Type: protein-coding] || 657529 [Gene Symbol: LOC657529] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: WD repeat-containing protein 63] [Gene Type: protein-coding]","LOC103314469 || LOC657529"]
[1700,"NW_015451645.1",8030,"SNV","C","T","Heterozygous",7,20,35,1,5,2,0.29,37.29,7,24,2,5,-1.51,0.09,0.51,"no","C/T","No",1,46.5,"XP_015840246.1:c.475G>A","XP_015840246.1:p.Glu159Lys","LOC107399080",107399080,null,"107399080 [Gene Symbol: LOC107399080] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399080] [Gene Type: protein-coding]","LOC107399080"]
[1701,"NW_015451657.1",21911,"SNV","G","A","Heterozygous",6,24,25,0.99,6,0,0,35.5,6,30,1,6,-0.9,0.01,0.09,"no","A/G","No",1,22.71,"XP_015840258.1:c.388G>A","XP_015840258.1:p.Glu130Lys","LOC107399091",107399091,null,"107399091 [Gene Symbol: LOC107399091] [Locus Tag: TcasGA2_TC033284] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399091] [Gene Type: protein-coding]","LOC107399091; TcasGA2_TC033284"]
[1702,"NW_015451657.1",28273,"Deletion","A","-","Heterozygous",15,21,71.43,1,15,2,0.12,35.67,17,23,6,10,-2.96,0.3,0.52,"no","-/A","Yes",8,33.78,"XP_015840258.1:c.762delA","XP_015840258.1:p.Arg257fs","LOC107399091",107399091,null,"107399091 [Gene Symbol: LOC107399091] [Locus Tag: TcasGA2_TC033284] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399091] [Gene Type: protein-coding]","LOC107399091; TcasGA2_TC033284"]
[1703,"NW_015451687.1",88244,"SNV","C","T","Homozygous",49,53,92.45,1,34,20,0.37,37.22,54,58,22,35,null,1,1,"no","T/T","No",1,82.07,"XP_008197770.1:c.[2114+22406C>T]; XP_015840269.1:c.[295G>A]; XP_015840265.1:c.[2114+22406C>T]; XP_008197805.1:c.[1643+22406C>T]","XP_015840269.1:p.Gly99Arg","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[1704,"NW_015451687.1",88352,"SNV","T","C","Homozygous",63,65,96.92,1,42,26,0.38,38.14,68,70,23,28,null,1,1,"no","C/C","No",1,151.09,"XP_015840265.1:c.[2114+22514T>C]; XP_015840270.1:c.[202A>G]; XP_015840269.1:c.[225+36A>G]; XP_008197805.1:c.[1643+22514T>C]; XP_008197770.1:c.[2114+22514T>C]","XP_015840270.1:p.Thr68Ala","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[1705,"NW_015451687.1",88390,"SNV","T","C","Homozygous",68,71,95.77,1,29,44,0.4,36.28,73,76,30,31,null,1,1,"no","C/C","No",1,147.78,"XP_015840269.1:c.[223A>G]; XP_008197805.1:c.[1643+22552T>C]; XP_008197770.1:c.[2114+22552T>C]; XP_015840270.1:c.[164A>G]; XP_015840265.1:c.[2114+22552T>C]","XP_015840269.1:p.[Ile75Val]; XP_015840270.1:p.[Asn55Ser]","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[1706,"NW_015451687.1",88411,"SNV","C","G","Homozygous",76,79,96.2,1,22,63,0.26,37.66,85,88,32,33,null,1,1,"no","G/G","No",1,200,"XP_015840265.1:c.[2114+22573C>G]; XP_015840269.1:c.[202G>C]; XP_015840270.1:c.[143G>C]; XP_008197805.1:c.[1643+22573C>G]; XP_008197770.1:c.[2114+22573C>G]","XP_015840269.1:p.[Glu68Gln]; XP_015840270.1:p.[Arg48Thr]","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[1707,"NW_015451687.1",88420,"SNV","C","A","Homozygous",76,79,96.2,1,23,62,0.27,38.25,85,88,31,33,null,1,1,"no","A/A","No",1,156.54,"XP_015840270.1:c.[134G>T]; XP_008197770.1:c.[2114+22582C>A]; XP_015840265.1:c.[2114+22582C>A]; XP_015840269.1:c.[193G>T]; XP_008197805.1:c.[1643+22582C>A]","XP_015840270.1:p.[Cys45Phe]; XP_015840269.1:p.[Val65Phe]","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[1708,"NW_015451687.1",256716,"SNV","G","A","Homozygous",28,28,100,1,11,25,0.31,38.89,36,36,13,13,null,1,1,"no","A/A","No",1,106.56,"XP_008198234.1:c.[500C>T]; XP_008198284.1:c.[500C>T]","XP_008198234.1:p.[Thr167Ile]; XP_008198284.1:p.[Thr167Ile]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[1709,"NW_015451687.1",256733,"SNV","G","C","Homozygous",31,31,100,1,15,21,0.42,38,36,36,15,18,null,1,1,"no","C/C","No",1,113.98,"XP_008198234.1:c.[483C>G]; XP_008198284.1:c.[483C>G]","XP_008198234.1:p.[Asp161Glu]; XP_008198284.1:p.[Asp161Glu]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[1710,"NW_015451687.1",256768,"SNV","G","A","Homozygous",19,22,86.36,0.88,12,14,0.46,36.79,26,29,11,9,null,0.97,1,"no","A/A","No",1,9.11,"XP_008198284.1:c.[448C>T]; XP_008198234.1:c.[448C>T]","XP_008198284.1:p.[Gln150*]; XP_008198234.1:p.[Gln150*]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[1711,"NW_015451694.1",19578,"SNV","T","A","Heterozygous",14,40,35,1,7,8,0.47,38.14,15,41,8,13,0.74,0.94,1,"no","A/T","No",1,80.19,"XP_015840273.1:c.1040A>T","XP_015840273.1:p.Asn347Ile","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[1712,"NW_015451694.1",20302,"SNV","C","T","Heterozygous",15,38,39.47,1,14,5,0.26,38.8,19,47,10,10,-0.84,0.44,0.83,"no","C/T","No",1,98.34,"XP_015840273.1:c.316G>A","XP_015840273.1:p.Glu106Lys","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[1713,"NW_015451702.1",13636,"SNV","C","A","Heterozygous",7,22,31.82,1,5,7,0.42,35.57,12,31,2,3,-0.18,0.03,0.99,"no","A/C","No",1,39.1,"XP_008197973.1:c.452C>A","XP_008197973.1:p.Ser151Tyr","LOC657141",657141,null,"657141 [Gene Symbol: LOC657141] [Locus Tag: TcasGA2_TC031717] [Chromosome: Un] [Map Location: ] [Description: rho guanine nucleotide exchange factor 4] [Gene Type: protein-coding]","TcasGA2_TC031717; LOC657141"]
[1714,"NW_015451702.1",63408,"SNV","T","C","Homozygous",25,25,100,1,7,20,0.26,37.6,27,27,5,14,null,1,1,"no","C/C","No",1,95.92,"XP_968788.2:c.6833A>G","XP_968788.2:p.Asn2278Ser","LOC657224",657224,null,"657224 [Gene Symbol: LOC657224] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: remodeling and spacing factor 1] [Gene Type: protein-coding]","LOC657224"]
[1715,"NW_015451702.1",126415,"SNV","C","A","Homozygous",24,24,100,1,3,21,0.12,37.42,24,24,5,11,null,1,1,"no","A/A","No",1,94.52,"XP_015840277.1:c.304C>A","XP_015840277.1:p.Pro102Thr","LOC107399111",107399111,null,"107399111 [Gene Symbol: LOC107399111] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399111] [Gene Type: protein-coding]","LOC107399111"]
[1716,"NW_015451702.1",216730,"SNV","T","G","Homozygous",21,21,100,1,8,15,0.35,36.05,23,23,11,13,null,1,1,"no","G/G","No",1,83.89,"XP_015840281.1:c.445T>G","XP_015840281.1:p.Leu149Val","LOC107399113",107399113,null,"107399113 [Gene Symbol: LOC107399113] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399113] [Gene Type: protein-coding]","LOC107399113"]
[1717,"NW_015451723.1",3500,"SNV","A","G","Heterozygous",4,20,20,0.95,3,3,0.5,36.75,6,28,4,3,-0.94,0.73,1,"no","A/G","No",1,12.82,"XP_015840301.1:c.28A>G","XP_015840301.1:p.Ser10Gly","LOC107399117",107399117,null,"107399117 [Gene Symbol: LOC107399117] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399117] [Gene Type: protein-coding]","LOC107399117"]
[1718,"NW_015451723.1",3678,"SNV","G","A","Heterozygous",6,28,21.43,0.93,6,0,0,39.33,6,28,1,6,0.06,0.19,0.41,"no","A/G","No",1,11.77,"XP_015840301.1:c.206G>A","XP_015840301.1:p.Arg69Gln","LOC107399117",107399117,null,"107399117 [Gene Symbol: LOC107399117] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399117] [Gene Type: protein-coding]","LOC107399117"]
[1719,"NW_015451782.1",41563,"SNV","A","T","Heterozygous",11,35,31.43,1,6,5,0.45,40.27,11,35,3,6,0.76,0.31,0.96,"no","A/T","No",1,55.86,"XP_015840326.1:c.269T>A","XP_015840326.1:p.Ile90Asn","LOC107399134",107399134,null,"107399134 [Gene Symbol: LOC107399134] [Locus Tag: TcasGA2_TC004339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399134] [Gene Type: protein-coding]","LOC107399134; TcasGA2_TC004339"]
[1720,"NW_015451782.1",41654,"SNV","T","C","Heterozygous",10,25,40,1,0,10,0,40.8,10,30,5,3,3.77,0.27,0.33,"no","C/T","No",1,72.54,"XP_015840326.1:c.178A>G","XP_015840326.1:p.Ile60Val","LOC107399134",107399134,null,"107399134 [Gene Symbol: LOC107399134] [Locus Tag: TcasGA2_TC004339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399134] [Gene Type: protein-coding]","LOC107399134; TcasGA2_TC004339"]
[1721,"NW_015451782.1",41750,"SNV","T","A","Heterozygous",9,23,39.13,1,0,9,0,37.89,9,25,4,5,-0.5,0.07,0.03,"no","A/T","No",1,63.72,"XP_015840326.1:c.82A>T","XP_015840326.1:p.Ile28Phe","LOC107399134",107399134,null,"107399134 [Gene Symbol: LOC107399134] [Locus Tag: TcasGA2_TC004339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399134] [Gene Type: protein-coding]","LOC107399134; TcasGA2_TC004339"]
[1722,"NW_015451788.1",4528,"SNV","T","G","Heterozygous",12,35,34.29,1,1,12,0.08,39.17,13,42,4,6,1.16,0.08,0.1,"no","G/T","No",1,71.63,"XP_008201200.1:c.38T>G","XP_008201200.1:p.Val13Gly","LOC103315116",103315116,null,"103315116 [Gene Symbol: LOC103315116] [Locus Tag: TcasGA2_TC031671] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315116] [Gene Type: protein-coding]","TcasGA2_TC031671; LOC103315116"]
[1723,"NW_015451823.1",2541,"SNV","C","T","Homozygous",21,21,100,1,10,11,0.48,36.9,21,21,8,13,null,1,1,"no","T/T","No",1,85.53,"XP_973052.1:c.146G>A","XP_973052.1:p.Gly49Glu","LOC661821",661821,null,"661821 [Gene Symbol: LOC661821] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: methyltransferase-like protein 16 homolog] [Gene Type: protein-coding]","LOC661821"]
[1724,"NW_015451896.1",3973,"SNV","C","T","Heterozygous",9,27,33.33,1,4,5,0.44,37,9,29,4,5,-1.11,0.32,0.67,"no","C/T","No",1,52.57,"XP_015840345.1:c.1141C>T","XP_015840345.1:p.Pro381Ser","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[1725,"NW_015451896.1","36704^36705","Insertion","-","C","Heterozygous",8,27,29.63,1,4,4,0.5,38.5,8,30,3,4,1.01,0.08,0.45,"no","-/C","No",1,42.66,"XP_015840349.1:c.[408_409insC]; XP_015840348.1:c.[432_433insC]","XP_015840349.1:p.[Arg137fs]; XP_015840348.1:p.[Arg145fs]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[1726,"NW_015451916.1",2575,"SNV","C","T","Homozygous",119,119,100,1,68,64,0.48,37.15,132,132,40,54,null,1,1,"no","T/T","No",1,200,"XP_015840352.1:c.470C>T","XP_015840352.1:p.Pro157Leu","LOC107399160",107399160,null,"107399160 [Gene Symbol: LOC107399160] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399160] [Gene Type: protein-coding]","LOC107399160"]
[1727,"NW_015451937.1",718757,"SNV","G","A","Heterozygous",7,23,30.43,1,2,7,0.22,38.43,9,28,2,2,-0.2,0.15,0.38,"no","A/G","No",1,38.19,"XP_015840357.1:c.207G>A","XP_015840357.1:p.Trp69*","LOC107399165",107399165,null,"107399165 [Gene Symbol: LOC107399165] [Locus Tag: TcasGA2_TC002310] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399165] [Gene Type: protein-coding]","LOC107399165; TcasGA2_TC002310"]
[1728,"NW_015451977.1",1234,"SNV","G","A","Heterozygous",7,30,23.33,0.99,6,3,0.33,39.14,9,38,4,5,2.16,0.06,0.47,"no","A/G","No",1,18.72,"XP_015840400.1:c.[97G>A]; XP_015840401.1:c.[97G>A]; XP_008197342.1:c.[97G>A]","XP_015840400.1:p.[Asp33Asn]; XP_015840401.1:p.[Asp33Asn]; XP_008197342.1:p.[Asp33Asn]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1729,"NW_015451977.1",1603,"SNV","C","T","Heterozygous",20,49,40.82,1,6,15,0.29,36.65,21,53,6,12,-0.26,0.07,0.39,"no","C/T","No",1,131.38,"XP_015840401.1:c.[466C>T]; XP_008197342.1:c.[466C>T]; XP_015840400.1:c.[466C>T]","XP_015840401.1:p.[Leu156Phe]; XP_008197342.1:p.[Leu156Phe]; XP_015840400.1:p.[Leu156Phe]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1730,"NW_015451977.1",1778,"Deletion","G","-","Homozygous",57,57,100,1,36,37,0.49,36.95,73,73,21,36,null,1,1,"no","-/-","No",1,200,"XP_008197342.1:c.[641delG]; XP_015840400.1:c.[641delG]; XP_015840401.1:c.[641delG]","XP_008197342.1:p.[Glu215fs]; XP_015840400.1:p.[Glu215fs]; XP_015840401.1:p.[Glu215fs]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1731,"NW_015451977.1","1788..1789","MNV","GA","AG","Heterozygous",51,66,77.27,1,30,37,0.45,36.98,67,82,22,37,3.64,0.94,1,"no","complex","No",1,200,"XP_008197342.1:c.[651_652delGAinsAG]; XP_015840400.1:c.[651_652delGAinsAG]; XP_015840401.1:c.[651_652delGAinsAG]","XP_008197342.1:p.[Thr218Ala]; XP_015840400.1:p.[Thr218Ala]; XP_015840401.1:p.[Thr218Ala]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1732,"NW_015451977.1",1904,"SNV","G","A","Heterozygous",18,47,38.3,1,15,5,0.25,35.17,20,50,13,13,-0.68,0.44,0.53,"no","A/G","No",1,111.66,"XP_015840400.1:c.[767G>A]; XP_008197342.1:c.[747+20G>A]; XP_015840401.1:c.[767G>A]","XP_015840400.1:p.[Arg256His]; XP_015840401.1:p.[Arg256His]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1733,"NW_015451977.1",2015,"SNV","C","T","Heterozygous",14,24,58.33,1,7,11,0.39,37.79,18,29,8,12,0,0.68,1,"no","C/T","No",1,75.32,"XP_015840400.1:c.[878C>T]; XP_008197342.1:c.[747+131C>T]; XP_015840401.1:c.[878C>T]","XP_015840400.1:p.[Pro293Leu]; XP_015840401.1:p.[Pro293Leu]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1734,"NW_015451977.1",2072,"SNV","A","G","Heterozygous",9,32,28.12,1,0,9,0,35.44,9,37,4,7,-1.82,0.28,0.11,"no","A/G","No",1,40.22,"XP_015840400.1:c.[935A>G]; XP_008197342.1:c.[747+188A>G]; XP_015840401.1:c.[935A>G]","XP_015840400.1:p.[Asn312Ser]; XP_015840401.1:p.[Asn312Ser]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1735,"NW_015451977.1",2158,"SNV","A","G","Heterozygous",28,38,73.68,1,19,12,0.39,37.25,31,44,13,16,0.4,0.95,1,"no","A/G","No",1,37.44,"XP_015840400.1:c.[1021A>G]; XP_008197342.1:c.[747+274A>G]; XP_015840401.1:c.[940-49A>G]","XP_015840400.1:p.Asn341Asp","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1736,"NW_015451977.1",2194,"SNV","C","T","Heterozygous",10,44,22.73,0.98,6,5,0.45,36.2,11,45,4,7,-3.44,0.38,0.97,"no","C/T","No",1,17.99,"XP_015840401.1:c.[940-13C>T]; XP_015840400.1:c.[1057C>T]; XP_008197342.1:c.[747+310C>T]","XP_015840400.1:p.Leu353Phe","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1737,"NW_015451977.1",2363,"SNV","G","A","Heterozygous",64,84,76.19,1,38,45,0.46,36.92,83,107,29,30,-0.21,0.95,1,"no","A/G","No",1,35.82,"XP_008197342.1:c.[747+479G>A]; XP_015840400.1:c.[1226G>A]","XP_015840400.1:p.Arg409Lys","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1738,"NW_015451977.1",2455,"SNV","T","A","Homozygous",31,38,81.58,0.55,16,18,0.47,35.42,34,41,16,16,-1.3,0.98,0.96,"no","A/A","No",1,3.42,"XP_008197342.1:c.[747+571T>A]; XP_015840400.1:c.[1318T>A]","XP_015840400.1:p.Ser440Thr","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1739,"NW_015451977.1",2929,"SNV","C","T","Heterozygous",22,30,73.33,1,19,12,0.39,36.14,31,39,11,12,0.56,0.89,1,"no","C/T","No",1,33.08,"XP_015840400.1:c.[1792C>T]; XP_008197342.1:c.[748-764C>T]","XP_015840400.1:p.Arg598Cys","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1740,"NW_015451977.1",2952,"SNV","A","T","Heterozygous",25,39,64.1,1,13,20,0.39,35.92,33,47,12,12,0.22,0.88,0.78,"no","A/T","No",1,83.05,"XP_015840400.1:c.[1815A>T]; XP_008197342.1:c.[748-741A>T]","XP_015840400.1:p.Lys605Asn","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1741,"NW_015452036.1","37424^37425","Insertion","-","C","Heterozygous",10,26,38.46,1,5,8,0.38,40.1,13,32,4,4,1.95,0.08,0.62,"no","-/C","No",1,61.02,"XP_015840418.1:c.34_35insC","XP_015840418.1:p.Glu12fs","LOC103312967",103312967,null,"103312967 [Gene Symbol: LOC103312967] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312967] [Gene Type: protein-coding]","LOC103312967"]
[1742,"NW_015452036.1",37447,"SNV","T","A","Heterozygous",7,20,35,1,3,4,0.43,39.71,7,26,3,5,0.87,0.38,0.95,"no","A/T","No",1,46.54,"XP_015840418.1:c.57T>A","XP_015840418.1:p.Cys19*","LOC103312967",103312967,null,"103312967 [Gene Symbol: LOC103312967] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312967] [Gene Type: protein-coding]","LOC103312967"]
[1743,"NW_015452070.1","7083..7085","Deletion","AGA","-","Heterozygous",6,22,27.27,1,2,5,0.29,35.5,7,23,5,6,-1.99,0.11,0.99,"no","complex","No",1,200,"XP_008194847.1:c.[1761_1763delAGA]; XP_008194859.1:c.[1722_1724delAGA]; XP_008194842.1:c.[1770_1772delAGA]; XP_008194851.1:c.[1722_1724delAGA]; XP_008194863.1:c.[1476_1478delAGA]","XP_008194847.1:p.[Glu593del]; XP_008194859.1:p.[Glu580del]; XP_008194842.1:p.[Glu596del]; XP_008194851.1:p.[Glu580del]; XP_008194863.1:p.[Glu498del]","LOC103313415",103313415,null,"103313415 [Gene Symbol: LOC103313415] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: glutamic acid-rich protein] [Gene Type: protein-coding]","LOC103313415"]
[1744,"NW_015452075.1",5456,"SNV","C","T","Homozygous",25,25,100,1,23,5,0.18,37.76,28,28,11,19,null,1,1,"no","T/T","No",1,97.56,"XP_008191547.1:c.515G>A","XP_008191547.1:p.Arg172His","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[1745,"NW_015452075.1",5574,"SNV","T","C","Homozygous",30,30,100,1,19,15,0.44,38.73,34,34,14,17,null,1,1,"no","C/C","No",1,110.98,"XP_008191547.1:c.397A>G","XP_008191547.1:p.Lys133Glu","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[1746,"NW_015452075.1",5782,"SNV","A","C","Homozygous",27,27,100,1,17,18,0.49,37.41,35,35,15,15,null,1,1,"no","C/C","No",1,101.95,"XP_008191547.1:c.189T>G","XP_008191547.1:p.Cys63Trp","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[1747,"NW_015452075.1",5882,"SNV","T","A","Heterozygous",8,30,26.67,1,4,4,0.5,37.88,8,37,4,7,1.06,0.41,0.84,"no","A/T","No",1,31.45,"XP_008191547.1:c.89A>T","XP_008191547.1:p.Gln30Leu","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[1748,"NW_015452075.1",5948,"SNV","A","G","Homozygous",40,40,100,1,16,32,0.33,37.67,48,48,19,20,null,1,1,"no","G/G","No",1,140.97,"XP_008191547.1:c.23T>C","XP_008191547.1:p.Ile8Thr","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[1749,"NW_015452075.1",8412,"SNV","T","C","Heterozygous",5,21,23.81,0.99,0,5,0,39,5,21,2,3,-0.12,0.18,0.56,"no","C/T","No",1,19.88,"XP_015840425.1:c.1043A>G","XP_015840425.1:p.Tyr348Cys","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[1750,"NW_015452075.1",10277,"SNV","C","A","Heterozygous",9,29,31.03,1,9,6,0.4,34.44,15,37,4,5,-2.57,0.17,0.99,"no","A/C","No",1,45.17,"XP_015840425.1:c.15G>T","XP_015840425.1:p.Lys5Asn","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[1751,"NW_015452075.1",10288,"SNV","G","C","Heterozygous",9,28,32.14,1,9,7,0.44,33.89,16,38,4,5,-2.93,0.13,0.99,"no","C/G","No",1,50.34,"XP_015840425.1:c.4C>G","XP_015840425.1:p.Pro2Ala","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[1752,"NW_015452103.1",781,"SNV","C","T","Homozygous",64,64,100,1,16,56,0.22,37.78,72,72,23,33,null,1,1,"no","T/T","No",1,200,"XP_008198969.1:c.223C>T","XP_008198969.1:p.Arg75Cys","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1753,"NW_015452103.1",820,"SNV","A","G","Homozygous",59,59,100,1,21,45,0.32,39.05,66,66,21,29,null,1,1,"no","G/G","No",1,200,"XP_008198969.1:c.262A>G","XP_008198969.1:p.Ile88Val","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1754,"NW_015452103.1",886,"SNV","A","G","Homozygous",49,49,100,1,37,20,0.35,37.78,57,57,18,25,null,1,1,"no","G/G","No",1,200,"XP_008198969.1:c.328A>G","XP_008198969.1:p.Ser110Gly","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1755,"NW_015452103.1",905,"SNV","T","C","Homozygous",40,47,85.11,1,30,16,0.35,37.23,46,55,15,23,null,0.9,1,"no","C/C","No",1,44.31,"XP_008198969.1:c.347T>C","XP_008198969.1:p.Leu116Pro","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1756,"NW_015452103.1",947,"SNV","T","C","Homozygous",42,42,100,1,30,14,0.32,36.95,44,44,16,27,null,1,1,"no","C/C","No",1,146.54,"XP_008198969.1:c.389T>C","XP_008198969.1:p.Met130Thr","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1757,"NW_015452103.1",1126,"SNV","A","G","Homozygous",62,62,100,1,27,45,0.38,37.13,72,72,22,28,null,1,1,"no","G/G","No",1,159.55,"XP_008198969.1:c.568A>G","XP_008198969.1:p.Ile190Val","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1758,"NW_015452103.1",1203,"Deletion","G","-","Homozygous",57,57,100,1,21,41,0.34,37.14,62,62,24,32,null,1,1,"no","-/-","No",1,200,"XP_008198969.1:c.645delG","XP_008198969.1:p.Ala216fs","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1759,"NW_015452103.1",1238,"SNV","T","C","Homozygous",32,32,100,1,19,23,0.45,35.69,42,42,20,22,null,1,1,"no","C/C","No",1,116.99,"XP_008198969.1:c.680T>C","XP_008198969.1:p.Leu227Pro","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1760,"NW_015452103.1",1250,"SNV","A","G","Homozygous",42,42,100,1,28,24,0.46,37.55,52,52,22,28,null,1,1,"no","G/G","No",1,147.5,"XP_008198969.1:c.692A>G","XP_008198969.1:p.Asn231Ser","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1761,"NW_015452103.1",1259,"SNV","C","A","Homozygous",41,41,100,1,28,20,0.42,36.29,48,48,23,27,null,1,1,"no","A/A","No",1,142.39,"XP_008198969.1:c.701C>A","XP_008198969.1:p.Thr234Asn","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1762,"NW_015452103.1",1273,"SNV","T","A","Homozygous",49,49,100,1,31,38,0.45,37.9,69,69,23,27,null,1,1,"no","A/A","No",1,200,"XP_008198969.1:c.715T>A","XP_008198969.1:p.*239Lys","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1763,"NW_015452111.1",259,"SNV","T","C","Heterozygous",8,29,27.59,1,6,6,0.5,35.75,12,40,6,6,-0.71,0.92,1,"no","C/T","No",1,35.71,"XP_001808125.1:c.749A>G","XP_001808125.1:p.Gln250Arg","LOC100142014",100142014,null,"100142014 [Gene Symbol: LOC100142014] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142014] [Gene Type: protein-coding]","LOC100142014"]
[1764,"NW_015452111.1","643^644","Insertion","-","T","Heterozygous",5,21,23.81,1,1,4,0.2,35.6,5,22,2,2,-0.33,0.06,0.78,"no","-/T","Yes",7,23.3,"XP_001808125.1:c.364_365insA","XP_001808125.1:p.Ile122fs","LOC100142014",100142014,null,"100142014 [Gene Symbol: LOC100142014] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142014] [Gene Type: protein-coding]","LOC100142014"]
[1765,"NW_015452142.1",23917,"SNV","G","A","Heterozygous",14,34,41.18,1,4,11,0.27,39.43,15,40,6,7,0.44,0.32,0.98,"no","A/G","No",1,96.72,"XP_008200958.2:c.632C>T","XP_008200958.2:p.Ser211Phe","LOC103315049",103315049,null,"103315049 [Gene Symbol: LOC103315049] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative nuclease HARBI1] [Gene Type: protein-coding]","LOC103315049"]
[1766,"NW_015452142.1","26946..26954","Deletion","AGTTCTTAA","-","Heterozygous",6,22,27.27,1,0,6,0,34.33,6,22,3,1,null,{"v":0.00805,"d":"8.05E-03"},0.09,"no","complex","No",1,200,"XP_015840428.1:c.214_222delTTAAGAACT","XP_015840428.1:p.Leu72_Thr74del","LOC107399187",107399187,null,"107399187 [Gene Symbol: LOC107399187] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399187] [Gene Type: protein-coding]","LOC107399187"]
[1767,"NW_015452142.1",26953,"SNV","A","G","Heterozygous",14,20,70,1,11,3,0.21,37.57,14,20,7,6,null,0.22,0.49,"no","complex","No",1,200,"XP_015840428.1:c.215T>C","XP_015840428.1:p.Leu72Ser","LOC107399187",107399187,null,"107399187 [Gene Symbol: LOC107399187] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399187] [Gene Type: protein-coding]","LOC107399187"]
[1768,"NW_015452165.1","17630..17632","Deletion","GAG","-","Heterozygous",13,40,32.5,1,8,8,0.5,38.85,16,46,10,11,4.32,0.22,0.44,"no","complex","No",1,200,"XP_015840431.1:c.175_177delGAG","XP_015840431.1:p.Glu60del","LOC107399193",107399193,null,"107399193 [Gene Symbol: LOC107399193] [Locus Tag: TcasGA2_TC031256] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399193] [Gene Type: protein-coding]","TcasGA2_TC031256; LOC107399193"]
[1769,"NW_015452165.1",17702,"SNV","A","G","Heterozygous",42,85,49.41,1,40,13,0.25,38.1,53,104,21,28,-0.5,0.48,0.6,"no","A/G","No",1,200,"XP_015840431.1:c.247A>G","XP_015840431.1:p.Lys83Glu","LOC107399193",107399193,null,"107399193 [Gene Symbol: LOC107399193] [Locus Tag: TcasGA2_TC031256] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399193] [Gene Type: protein-coding]","TcasGA2_TC031256; LOC107399193"]
[1770,"NW_015452189.1",7655,"SNV","G","T","Heterozygous",5,21,23.81,0.96,5,0,0,40.4,5,24,1,4,1.98,0.02,0.28,"no","G/T","No",1,13.6,"XP_008196454.1:c.[294C>A]; XP_972983.2:c.[294C>A]","XP_008196454.1:p.[Cys98*]; XP_972983.2:p.[Cys98*]","LOC661744",661744,null,"661744 [Gene Symbol: LOC661744] [Locus Tag: TcasGA2_TC031885] [Chromosome: Un] [Map Location: ] [Description: tektin-1] [Gene Type: protein-coding]","LOC661744; TcasGA2_TC031885"]
[1771,"NW_015452199.1",1624,"SNV","G","A","Heterozygous",5,24,20.83,0.91,5,0,0,37.8,5,30,3,2,0.11,0.02,0.2,"no","A/G","No",1,10.29,"XP_015840435.1:c.242G>A","XP_015840435.1:p.Arg81Gln","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[1772,"NW_015452199.1",1665,"SNV","G","A","Homozygous",27,30,90,1,23,8,0.26,38.15,31,34,16,18,null,0.98,1,"no","A/A","No",1,30.83,"XP_015840435.1:c.283G>A","XP_015840435.1:p.Glu95Lys","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[1773,"NW_015452199.1",1777,"SNV","T","A","Heterozygous",9,21,42.86,1,0,9,0,39.44,9,21,4,5,0.6,0.83,0.69,"no","A/T","No",1,69.28,"XP_015840435.1:c.395T>A","XP_015840435.1:p.Val132Glu","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[1774,"NW_015452199.1",1794,"SNV","A","G","Heterozygous",9,21,42.86,1,0,9,0,40,9,21,4,5,2.52,0.52,0.69,"no","A/G","No",1,70.84,"XP_015840435.1:c.412A>G","XP_015840435.1:p.Thr138Ala","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[1775,"NW_015452199.1",2133,"SNV","G","A","Heterozygous",11,34,32.35,1,8,7,0.47,38.45,15,43,6,5,-0.48,0.18,0.73,"no","A/G","No",1,48.51,"XP_015840435.1:c.751G>A","XP_015840435.1:p.Asp251Asn","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[1776,"NW_015452265.1",9083,"SNV","A","G","Heterozygous",6,21,28.57,1,4,2,0.33,38.17,6,29,4,6,2.06,0.16,0.89,"no","A/G","No",1,32.55,"XP_015840446.1:c.2498A>G","XP_015840446.1:p.Glu833Gly","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[1777,"NW_015452265.1",9227,"SNV","G","A","Homozygous",47,47,100,1,19,31,0.38,38,50,50,24,24,null,1,1,"no","A/A","No",1,200,"XP_015840446.1:c.2642G>A","XP_015840446.1:p.Cys881Tyr","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[1778,"NW_015452265.1",9493,"SNV","A","C","Homozygous",24,25,96,1,10,18,0.36,39.08,28,30,15,15,null,1,1,"no","C/C","No",1,65.55,"XP_015840446.1:c.2908A>C","XP_015840446.1:p.Ile970Leu","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[1779,"NW_015452265.1",9527,"SNV","A","G","Homozygous",25,25,100,1,13,19,0.41,37.28,32,32,14,19,null,1,1,"no","G/G","No",1,95.92,"XP_015840446.1:c.2942A>G","XP_015840446.1:p.Asp981Gly","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[1780,"NW_015452276.1",38834,"SNV","G","C","Homozygous",22,22,100,1,4,21,0.16,35.82,25,25,7,7,null,1,1,"no","C/C","No",1,86.9,"XP_015840458.1:c.1298G>C","XP_015840458.1:p.Ser433Thr","LOC656900",656900,null,"656900 [Gene Symbol: LOC656900] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: gastrulation defective protein 1 homolog] [Gene Type: protein-coding]","LOC656900"]
[1781,"NW_015452276.1",117699,"SNV","A","C","Homozygous",21,21,100,1,8,18,0.31,36.05,26,26,3,5,null,1,1,"no","C/C","No",1,83.89,"XP_969008.2:c.2245A>C","XP_969008.2:p.Ile749Leu","LOC657455",657455,null,"657455 [Gene Symbol: LOC657455] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: small subunit processome component 20 homolog] [Gene Type: protein-coding]","LOC657455"]
[1782,"NW_015452276.1",119709,"SNV","T","C","Homozygous",20,20,100,1,12,15,0.44,38.05,27,27,10,13,null,1,1,"no","C/C","No",1,80.88,"XP_969008.2:c.4151T>C","XP_969008.2:p.Val1384Ala","LOC657455",657455,null,"657455 [Gene Symbol: LOC657455] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: small subunit processome component 20 homolog] [Gene Type: protein-coding]","LOC657455"]
[1783,"NW_015452276.1",203149,"SNV","A","G","Heterozygous",10,24,41.67,1,3,10,0.23,35.2,13,27,3,4,-3.13,0.06,0.97,"no","A/G","No",1,75.28,"XP_015840450.1:c.3436T>C","XP_015840450.1:p.Phe1146Leu","LOC100142253",100142253,null,"100142253 [Gene Symbol: LOC100142253] [Locus Tag: TcasGA2_TC002339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142253] [Gene Type: protein-coding]","TcasGA2_TC002339; LOC100142253"]
[1784,"NW_015452276.1",203598,"SNV","G","T","Heterozygous",6,20,30,1,2,6,0.25,39.33,8,22,1,1,1.53,0.01,0.26,"no","G/T","No",1,28.98,"XP_015840450.1:c.2987C>A","XP_015840450.1:p.Ala996Glu","LOC100142253",100142253,null,"100142253 [Gene Symbol: LOC100142253] [Locus Tag: TcasGA2_TC002339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142253] [Gene Type: protein-coding]","TcasGA2_TC002339; LOC100142253"]
[1785,"NC_003081.2",686,"SNV","G","A","Homozygous",1034,1050,98.48,1,548,617,0.47,39.11,1165,1186,182,156,null,1,1,"no","A/A","No",1,159.55,"NP_203156.1:c.484G>A","NP_203156.1:p.Gly162Arg","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[1786,"NC_003081.2",807,"SNV","G","C","Homozygous",922,922,100,1,533,571,0.48,38.59,1104,1104,175,148,null,1,1,"no","C/C","No",1,200,"NP_203156.1:c.605G>C","NP_203156.1:p.*202Ser","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[1787,"NC_003081.2",925,"SNV","G","C","Homozygous",1085,1088,99.72,1,676,581,0.46,38.68,1257,1260,175,165,null,1,1,"no","C/C","No",1,200,"NP_203156.1:c.723G>C","NP_203156.1:p.Leu241Phe","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[1788,"NC_003081.2",2381,"SNV","G","C","Homozygous",1257,1260,99.76,1,730,768,0.49,38.8,1498,1501,181,168,null,1,1,"no","C/C","No",1,200,"NP_258414.1:c.987G>C","NP_258414.1:p.Gln329His","COX1",803829,null,"803829 [Gene Symbol: COX1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome c oxidase subunit I] [Gene Type: protein-coding]","COX1"]
[1789,"NC_003081.2","3997^3998","Insertion","-","AAC","Homozygous",1114,1115,99.91,1,613,716,0.46,38.66,1329,1330,178,166,null,1,1,"no","AAC/AAC","No",1,200,"NP_203158.1:c.134_135insAAC","NP_203158.1:p.Thr46_Ile47insThr","ATP8",803827,null,"803827 [Gene Symbol: ATP8] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: ATP synthase F0 subunit 8] [Gene Type: protein-coding]","ATP8"]
[1790,"NC_003081.2",4930,"SNV","A","G","Homozygous",1174,1186,98.99,1,658,715,0.48,38.6,1373,1386,171,160,null,1,1,"no","G/G","No",1,200,"NP_203160.2:c.247A>G","NP_203160.2:p.Ile83Val","COX3",803825,null,"803825 [Gene Symbol: COX3] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome c oxidase subunit III] [Gene Type: protein-coding]","COX3"]
[1791,"NC_003081.2","5591^5592","Insertion","-","T","Homozygous",901,902,99.89,1,525,550,0.49,37.95,1075,1076,170,145,null,1,1,"no","T/T","No",1,200,"NP_203161.1:c.65_66insT","NP_203161.1:p.*22fs","ND3",803821,null,"803821 [Gene Symbol: ND3] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 3] [Gene Type: protein-coding]","ND3"]
[1792,"NC_003081.2",6515,"SNV","C","T","Homozygous",949,963,98.55,1,579,558,0.49,38.66,1137,1153,174,161,null,1,1,"no","T/T","No",1,159.55,"NP_203162.1:c.1462G>A","NP_203162.1:p.Gly488Arg","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[1793,"NC_003081.2",6956,"SNV","T","A","Homozygous",1136,1136,100,1,695,621,0.47,38.38,1316,1316,178,160,null,1,1,"no","A/A","No",1,200,"NP_203162.1:c.1021A>T","NP_203162.1:p.Asn341Tyr","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[1794,"NC_003081.2",7444,"SNV","G","A","Homozygous",1193,1196,99.75,1,726,689,0.49,39.08,1415,1418,179,173,null,1,1,"no","A/A","No",1,200,"NP_203162.1:c.533C>T","NP_203162.1:p.Ser178Phe","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[1795,"NC_003081.2",8651,"SNV","C","T","Homozygous",1023,1023,100,1,583,614,0.49,37.55,1197,1197,171,164,null,1,1,"no","T/T","No",1,200,"NP_203163.1:c.721G>A","NP_203163.1:p.Ala241Thr","ND4",803822,null,"803822 [Gene Symbol: ND4] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 4] [Gene Type: protein-coding]","ND4"]
[1796,"NC_003081.2",11283,"SNV","C","T","Homozygous",1132,1132,100,1,602,728,0.45,38.83,1330,1330,171,164,null,1,1,"no","T/T","No",1,200,"NP_203166.1:c.1004C>T","NP_203166.1:p.Pro335Leu","CYTB",803817,null,"803817 [Gene Symbol: CYTB] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome b] [Gene Type: protein-coding]","CYTB"]
[1797,"NC_003081.2",11571,"SNV","A","G","Homozygous",988,989,99.9,1,608,541,0.47,38.23,1149,1150,171,154,null,1,1,"no","G/G","No",1,200,"NP_203167.1:c.886T>C","NP_203167.1:p.Ser296Pro","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[1798,"NC_003081.2",11787,"SNV","C","T","Homozygous",1011,1011,100,1,620,561,0.48,38.63,1181,1181,170,159,null,1,1,"no","T/T","No",1,200,"NP_203167.1:c.670G>A","NP_203167.1:p.Gly224Arg","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[1799,"NC_003081.2",11874,"SNV","C","T","Homozygous",1052,1052,100,1,547,700,0.44,38.39,1247,1247,172,158,null,1,1,"no","T/T","No",1,200,"NP_203167.1:c.583G>A","NP_203167.1:p.Val195Ile","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[1800,"NC_003081.2",12188,"SNV","G","A","Homozygous",1089,1109,98.2,1,637,641,0.5,38.5,1278,1304,175,164,null,1,1,"no","A/A","No",1,200,"NP_203167.1:c.269C>T","NP_203167.1:p.Ala90Val","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]

{"sheet":"Tyrosine_and_Tryptophan","index":2,"n_rows":55,"n_cols":2,"rows_kept":55}
["Tyrosine metabolism"]
[658043,"aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]"]
[658177,"aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]"]
[659321,"tyrosine aminotransferase [KO:K00815] [EC:2.6.1.5]"]
[662658,"4-hydroxyphenylpyruvate dioxygenase [KO:K00457] [EC:1.13.11.27]"]
[662314,"homogentisate 1,2-dioxygenase [KO:K00451] [EC:1.13.11.5]"]
[662347,"probable maleylacetoacetate isomerase 2 [KO:K01800] [EC:5.2.1.2]"]
[663294,"fumarylacetoacetase [KO:K01555] [EC:3.7.1.2]"]
[654918,"Th; tyrosine hydroxylase [KO:K00501] [EC:1.14.16.2]"]
[657666,"Y-f; yellow-f [KO:K22203] [EC:5.3.3.12]"]
[661439,"tyrosine decarboxylase [KO:K22329] [EC:4.1.1.25]"]
[661480,"tyrosine decarboxylase [KO:K22329] [EC:4.1.1.25]"]
[662962,"Ddc; dopa decarboxylase [KO:K01593] [EC:4.1.1.105 4.1.1.28]"]
[661842,"aromatic-L-amino-acid decarboxylase [KO:K01593] [EC:4.1.1.105 4.1.1.28]"]
[103313065,"aromatic-L-amino-acid decarboxylase [KO:K01593] [EC:4.1.1.105 4.1.1.28]"]
[661884,"cilia- and flagella-associated protein 47 [KO:K01593] [EC:4.1.1.105 4.1.1.28]"]
[663011,"TcTBH; tyramine beta hydroxylase [KO:K00503] [EC:1.14.17.1]"]
[103314476,"probable flavin-containing monoamine oxidase C [KO:K00274] [EC:1.4.3.4]"]
[654905,"Fdh; formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.1 1.1.1.284]"]
[664303,"acylpyruvase FAHD1, mitochondrial [KO:K01557] [EC:3.7.1.5]"]
[656105,"macrophage migration inhibitory factor homolog [KO:K07253] [EC:5.3.2.1]"]
[100142248,"macrophage migration inhibitory factor homolog [KO:K07253] [EC:5.3.2.1]"]
[]
["Tryptophan metabolism"]
[654844,"V; tryptophan oxygenase [KO:K00453] [EC:1.13.11.11]"]
[655994,"kynurenine formamidase [KO:K01432] [EC:3.5.1.9]"]
[655915,"kynurenine formamidase [KO:K01432] [EC:3.5.1.9]"]
[641538,"Cn; cinnabar [KO:K00486] [EC:1.14.13.9]"]
[663572,"2-oxoglutarate dehydrogenase, mitochondrial [KO:K00164] [EC:1.2.4.2]"]
[662219,"2-oxoglutarate dehydrogenase, mitochondrial [KO:K00164] [EC:1.2.4.2]"]
[660326,"glutaryl-CoA dehydrogenase, mitochondrial [KO:K00252] [EC:1.3.8.6]"]
[662336,"trifunctional enzyme subunit alpha, mitochondrial [KO:K07515] [EC:1.1.1.211 4.2.1.17]"]
[660433,"enoyl-CoA hydratase, mitochondrial [KO:K07511] [EC:4.2.1.17]"]
[661810,"hydroxyacyl-coenzyme A dehydrogenase, mitochondrial [KO:K00022] [EC:1.1.1.35]"]
[663885,"acetyl-CoA acetyltransferase, mitochondrial [KO:K00626] [EC:2.3.1.9]"]
[662066,"acetyl-CoA acetyltransferase, cytosolic [KO:K00626] [EC:2.3.1.9]"]
[656125,"kynurenine--oxoglutarate transaminase 3 [KO:K00816] [EC:2.6.1.64 4.4.1.13 2.6.1.7]"]
[655252,"kynurenine--oxoglutarate transaminase 3 [KO:K00816] [EC:2.6.1.64 4.4.1.13 2.6.1.7]"]
[662228,"aromatic amino acid aminotransferase DDB_G0287711 [KO:K00825] [EC:2.6.1.39 2.6.1.7]"]
[655758,"tryptophan 5-hydroxylase 1 [KO:K00502] [EC:1.14.16.4]"]
[662962,"Ddc; dopa decarboxylase [KO:K01593] [EC:4.1.1.105 4.1.1.28]"]
[661842,"aromatic-L-amino-acid decarboxylase [KO:K01593] [EC:4.1.1.1054.1.1.28]"]
[103313065,"aromatic-L-amino-acid decarboxylase [KO:K01593] [EC:4.1.1.105 4.1.1.28]"]
[661884,"cilia- and flagella-associated protein 47 [KO:K01593] [EC:4.1.1.105 4.1.1.28]"]
[103314476,"probable flavin-containing monoamine oxidase C [KO:K00274] [EC:1.4.3.4]"]
[103312192,"NAD/NADP-dependent betaine aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]"]
[656328,"aldehyde dehydrogenase, mitochondrial [KO:K00128] [EC:1.2.1.3]"]
[659438,"retinal dehydrogenase 1 [KO:K00128] [EC:1.2.1.3]"]
[103314817,"fatty aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]"]
[661224,"aldehyde dehydrogenase, dimeric NADP-preferring [KO:K00128] [EC:1.2.1.3]"]
[661279,"aldehyde dehydrogenase family 3 member B1 [KO:K00128] [EC:1.2.1.3]"]
[658395,"alpha-aminoadipic semialdehyde dehydrogenase [KO:K14085] [EC:1.2.1.3 1.2.1.8 1.2.1.31]"]
[655157,"catalase-like [KO:K03781] [EC:1.11.1.6]"]
[658645,"catalase [KO:K03781] [EC:1.11.1.6]"]
[658708,"catalase-like [KO:K03781] [EC:1.11.1.6]"]

{"sheet":"Enrichment_analysis","index":3,"n_rows":1327,"n_cols":17,"rows_kept":1327}
["Input data",null,null,"Enrichment result"]
["L","S",null,"L"]
[656402,654960,null,"Category","ID","Term","Count","%","PValue","Genes","List Total","Pop Hits","Pop Total","Fold Enrichment","Bonferroni","Benjamini","FDR"]
[657847,657847,null,"GOTERM_BP_DIRECT","GO:0006013","mannose metabolic process",5,0.377358490566037,0.006318350168982,"656698, 660728, 656452, 657014, 656754",256,9,2742,5.95052083333333,0.634980635107228,0.634980635107228,7.36039076799531]
[658173,658322,null,"GOTERM_BP_DIRECT","GO:0006281","DNA repair",10,0.754716981132075,0.0201488229119203,"103313062, 659827, 659873, 659059, 656183, 662157, 659762, 657818, 658288, 658153",256,45,2742,2.38020833333333,0.960693998239648,0.801742587123831,21.7699119481747]
[100142046,659434,null,"GOTERM_MF_DIRECT","GO:0004559","alpha-mannosidase activity",5,0.377358490566037,5.90328213706196E-3,"656698, 660728, 656452, 657014, 656754",413,9,4522,6.08286252354048,0.716664949398195,0.716664949398195,7.223384508972]
[103312277,103312276,null,"GOTERM_MF_DIRECT","GO:0003777","microtubule motor activity",8,0.60377358490566,0.0189729364486129,"662444, 657902, 656476, 656569, 661047, 663442, 107397944, 662184",413,31,4522,2.82558775287042,0.983093623709011,0.869975478116669,21.5387451252119]
[658988,660909,null,"GOTERM_MF_DIRECT","GO:0005524","ATP binding",62,4.67924528301886,0.0331574006403797,"657098, 662377, 103313274, 663765, 103313489, 657661, 659723, 663442, 660927, 659101, 660567, 655722, 658953, 656867, 661726, 661180, 658023, 658025, 662874, 660093, 660007, 659527, 657402, 103314078, 660831, 656476, 656569, 656879, 661047, 662564, 655279, 660900, 657782, 664271, 654869, 659223, 662061, 656183, 107398284, 661218, 656565, 661264, 107397944, 656521, 660815, 655767, 658811, 661265, 657918, 662184, 657609, 658981, 663804, 662444, 663368, 103313070, 656451, 100141658, 662098, 663280, 661737, 658153",413,535,4522,1.26887375257405,0.999240057796252,0.908744260672611,34.75334371362]
[100141763,100142250,null,"GOTERM_MF_DIRECT","GO:0004601","peroxidase activity",4,0.30188679245283,0.0416101689698539,"660719, 656984, 661785, 659451",413,9,4522,4.86629001883239,0.999882918585428,0.895978768696744,41.6196914919493]
[658481,103314876,null,"KEGG_PATHWAY","tca04512","ECM-receptor interaction",8,0.60377358490566,0.00385445987856715,"660112, 663310, 660948, 103313111, 656558, 657051, 663372, 100141763",271,22,2743,3.68064407916806,0.341035756647704,0.341035756647704,4.25531706210561]
[103312271,660326,null,"KEGG_PATHWAY","tca00511","Other glycan degradation",9,0.679245283018867,0.0123716519253225,"656698, 663208, 663233, 656452, 664560, 657014, 660426, 664564, 656754",271,33,2743,2.76048305937604,0.739322778235802,0.489434409929343,13.0792784370586]
[100142250,659752,null,"KEGG_PATHWAY","tca02010","ABC transporters",10,0.754716981132075,0.021302621075543,"658981, 657102, 103313070, 661218, 660927, 659101, 661726, 657184, 660837, 658521",271,43,2743,2.35390028318887,0.902269544195976,0.539379451553016,21.5304362025383]
[660392,100141915,null,"KEGG_PATHWAY","tca00510","N-Glycan biosynthesis",9,0.679245283018867,0.0327024588662553,"662545, 660728, 657250, 658408, 658173, 656424, 657332, 103312582, 662130",271,39,2743,2.33579335793357,0.97242668067437,0.592505020338687,31.2288165648477]
[659752,100141737]
[656639,655274,null,"S"]
[657452,655360,null,"Category","ID","Term","Count","%","PValue","Genes","List Total","Pop Hits","Pop Total","Fold Enrichment","Bonferroni","Benjamini","FDR"]
[657609,656016,null,"GOTERM_BP_DIRECT","GO:0007165","signal transduction",11,0.908340214698596,0.00564948169638745,"658403, 663232, 660076, 661340, 658815, 664364, 662755, 657274, 656615, 662131, 657185",223,50,2742,2.70511210762331,0.618305628142267,0.618305628142267,6.67835946546501]
[657688,657185,null,"GOTERM_CC_DIRECT","GO:0070469","respiratory chain",5,0.412881915772089,0.00672429047963021,"660535, 656326, 803821, 803823, 803820",252,12,3685,6.09292328042328,0.36367702721261,0.36367702721261,6.68593141521211]
[658543,658869,null,"GOTERM_CC_DIRECT","GO:0005694","chromosome",3,0.247729149463253,0.0402828569208816,"658295, 662406, 661193",252,5,3685,8.77380952380952,0.936379376837913,0.747768710977232,34.4072660650501]
[658619,660174,null,"GOTERM_MF_DIRECT","GO:0005524","ATP binding",60,4.95458298926507,0.00658469625808759,"662377, 663765, 657661, 659101, 661920, 655722, 659874, 657453, 655357, 656961, 661180, 658099, 655244, 662874, 661331, 661052, 656905, 660479, 659114, 100141737, 656575, 659527, 660483, 103314078, 660481, 103313043, 656476, 657012, 661047, 662564, 660296, 659434, 658305, 100142406, 660900, 662716, 100142393, 657782, 663293, 663974, 657742, 659223, 660983, 662169, 656565, 664031, 660174, 658811, 658978, 662184, 662250, 103313070, 662253, 103312221, 663133, 657845, 100141658, 662098, 662393, 661737",367,535,4522,1.38185337034301,0.71686627399331,0.71686627399331,7.88944642344405]
[656430,660479,null,"GOTERM_MF_DIRECT","GO:0003887","DNA-directed DNA polymerase activity",4,0.330305532617671,0.0216565962630587,"657330, 659589, 657782, 100142430",367,8,4522,6.16076294277929,0.984729883409435,0.876427686796094,23.8416440163634]
[656762,100141527,null,"GOTERM_MF_DIRECT","GO:0008137","NADH dehydrogenase (ubiquinone) activity",5,0.412881915772089,0.0431691208331199,"803821, 803822, 803823, 803824, 803820",367,17,4522,3.62397820163487,0.999781465569588,0.93976624241035,42.2435082047259]
[657022,661047,null,"GOTERM_MF_DIRECT","GO:0046872","metal ion binding",35,2.89017341040462,0.0438228472633284,"661984, 103313545, 658645, 103314485, 660543, 660900, 656812, 655977, 662716, 103313157, 660216, 659205, 661565, 103313906, 103313401, 103313408, 641605, 658718, 658622, 658162, 103313397, 103313398, 103313989, 656326, 100141915, 100142159, 663837, 662162, 660363, 803817, 663384, 654853, 657274, 661737, 103312695",367,313,4522,1.37780640892827,0.999808209453603,0.882318878352262,42.7324592034583]
[657185,660272,null,"KEGG_PATHWAY","tca00380","Tryptophan metabolism",8,0.660611065235342,0.0173883320114548,"658645, 661884, 660326, 662219, 661279, 662962, 658708, 659438",256,30,2743,2.85729166666666,0.857310252407633,0.857310252407633,18.0053801327476]
[657569,103313043,null,"KEGG_PATHWAY","tca00310","Lysine degradation",9,0.74318744838976,0.0177783995760526,"658295, 662406, 660326, 662219, 661279, 661193, 658776, 659438, 657811",256,37,2743,2.60631334459459,0.863462372782768,0.630490017432232,18.3729919353273]
[658041,655313,null,"KEGG_PATHWAY","tca00970","Aminoacyl-tRNA biosynthesis",9,0.74318744838976,0.0240937549503745,"657453, 659223, 657661, 657584, 103312221, 664536, 656575, 662393, 661180",256,39,2743,2.47265625,0.933273432480165,0.594398460286775,24.1194747130039]
[103313033,655476,null,"KEGG_PATHWAY","tca00061","Fatty acid biosynthesis",5,0.412881915772089,0.0345616367077986,"660113, 658978, 656239, 658944, 659179",256,14,2743,3.82672991071428,0.979843027737034,0.623203964603457,32.8376070623356]
[659623,655974,null,"KEGG_PATHWAY","tca04512","ECM-receptor interaction",6,0.495458298926507,0.0471245564616303,"663740, 660112, 663310, 660948, 103313111, 656558",256,22,2743,2.92223011363636,0.99529010768936,0.657546037728329,42.090508936902]
[660658,103314770]
[100141527,656636]
[100142228,656803]
[661047,100141625]
[103313041,654848]
[100142224,660695]
[662221,660397]
[655160,662393]
[103314770,662102]
[103314771,661124]
[656636,660629]
[656803,659419]
[656981,659126]
[659958,658755]
[661239,656155]
[661025,656239]
[660971,657159]
[662660,658403]
[661660,659221]
[660567,660216]
[659419,103315000]
[659126,660322]
[103314649,659123]
[658614,658611]
[658236,657991]
[655828,103314509]
[656569,107398207]
[656822,657922]
[657159,655829]
[661242,103315010]
[661785,658769]
[660322,656322]
[658611,107398610]
[103314509,659146]
[107398244,659560]
[658166,103315031]
[100141711,661307]
[656404,662755]
[103314980,657239]
[658704,103315048]
[659560,657390]
[659762,658643]
[661087,660156]
[661307,661310]
[655913,661409]
[656158,662567]
[103315046,663521]
[657239,663627]
[658845,663672]
[103315127,663447]
[103315156,664124]
[663324,641596]
[103315168,664364]
[107399279,664403]
[663521,656076]
[663672,657865]
[663884,658776]
[664053,103315057]
[664192,659368]
[664210,659904]
[652932,660029]
[664379,661248]
[655255,662363]
[655917,663360]
[655996,663484]
[656076,663795]
[657865,664187]
[658266,103315119]
[658408,664244]
[658647,100141793]
[658776,103315202]
[659904,656163]
[660029,656831]
[660093,657319]
[660584,657632]
[100142412,103315212]
[661139,659905]
[100141942,100141688]
[661669,660401]
[661710,660526]
[662787,661035]
[661704,661711]
[100141648,103315243]
[663113,662569]
[103315066,662697]
[100142616,662758]
[663484,662815]
[103315067,663577]
[663795,663648]
[664116,103315239]
[664148,663861]
[664171,663941]
[664178,659567]
[664187,659632]
[655505,659906]
[656916,107399254]
[658023,661495]
[103315228,661831]
[100141689,661960]
[662569,660159]
[103315244,661251]
[662815,660693]
[100142510,662250]
[100142108,662365]
[663431,103312221]
[663504,656167]
[103315239,103312261]
[663905,657950]
[663941,658780]
[655180,657382]
[657245,656393]
[657708,656311]
[659567,658622]
[659632,658698]
[103312164,658978]
[660466,658110]
[100141743,103312114]
[661873,657154]
[661960,103313135]
[655035,103312292]
[655834,656905]
[657085,657637]
[658024,658653]
[661455,660762]
[662467,661754]
[663144,661834]
[663465,661920]
[656817,662435]
[103312261,662729]
[658025,100141894]
[659707,663561]
[660815,663579]
[661200,663739]
[100141989,103312340]
[655749,664002]
[103312285,107397511]
[656984,664359]
[103314889,100142009]
[659827,655839]
[100142377,657250]
[660207,657478]
[659910,103312614]
[657476,659159]
[103312310,659232]
[658568,659306]
[658653,103312116]
[659078,100141933]
[661672,103312699]
[661754,659912]
[662729,661398]
[662868,661234]
[663561,661180]
[664216,660907]
[664250,659205]
[103312349,657135]
[664269,103312381]
[664335,658928]
[664359,107397550]
[655426,656084]
[655839,657090]
[103312366,658029]
[657250,100141710]
[657402,656709]
[103312586,657292]
[103312598,658383]
[103312116,658163]
[100141866,658314]
[100141585,659974]
[659912,103312428]
[103312734,103312427]
[103312803,655187]
[661180,103312417]
[103314697,661291]
[659205,103312863]
[658539,659499]
[657918,659438]
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[{"$nulls":4},657121,0,3,3]
[{"$nulls":4},103312110,0,3,3]
[{"$nulls":4},658818,0,3,3]
[{"$nulls":4},659115,0,3,3]
[{"$nulls":4},659874,0,3,3]
[{"$nulls":4},660002,0,3,3]
[{"$nulls":4},661007,0,3,3]
[{"$nulls":4},103314156,0,3,3]
[{"$nulls":4},661859,0,3,3]
[{"$nulls":4},662169,0,3,3]
[{"$nulls":4},663083,0,3,3]
[{"$nulls":4},656874,0,3,3]
[{"$nulls":4},655964,0,3,3]
[{"$nulls":4},658162,0,3,3]
[{"$nulls":4},103314180,0,3,3]
[{"$nulls":4},661569,0,3,3]
[{"$nulls":4},661612,0,3,3]
[{"$nulls":4},100141808,0,3,3]
[{"$nulls":4},661903,0,3,3]
[{"$nulls":4},662592,0,3,3]
[{"$nulls":4},662835,0,3,3]
[{"$nulls":4},103314184,0,3,3]
[{"$nulls":4},663164,0,3,3]
[{"$nulls":4},658603,0,3,3]
[{"$nulls":4},103314112,0,3,3]
[{"$nulls":4},657044,0,3,3]
[{"$nulls":4},657123,0,3,3]
[{"$nulls":4},100142416,0,3,3]
[{"$nulls":4},100142216,0,3,3]
[{"$nulls":4},100141868,0,3,3]
[{"$nulls":4},100142133,0,3,3]
[{"$nulls":4},660740,0,3,3]
[{"$nulls":4},655958,0,3,3]
[{"$nulls":4},656538,0,3,3]
[{"$nulls":4},657212,0,3,3]
[{"$nulls":4},658227,0,3,3]
[{"$nulls":4},659034,0,3,3]
[{"$nulls":4},657060,0,3,3]
[{"$nulls":4},656210,0,3,3]
[{"$nulls":4},659117,0,3,3]
[{"$nulls":4},658305,0,3,3]
[{"$nulls":4},657855,0,3,3]
[{"$nulls":4},659036,0,3,3]
[{"$nulls":4},100141517,0,3,3]
[{"$nulls":4},660134,0,3,{"$f":"SUM(F1922:G1922)","v":3}]
[{"$nulls":4},103314260,0,3,3]
[{"$nulls":4},662136,0,3,3]
[{"$nulls":4},100142149,0,3,3]
[{"$nulls":4},663003,0,3,3]
[{"$nulls":4},663411,0,3,3]
[{"$nulls":4},107398653,0,3,3]
[{"$nulls":4},103314254,0,3,3]
[{"$nulls":4},657517,0,3,3]
[{"$nulls":4},658068,0,3,3]
[{"$nulls":4},658530,0,3,3]
[{"$nulls":4},658608,0,3,3]
[{"$nulls":4},660503,0,3,3]
[{"$nulls":4},103314298,0,3,3]
[{"$nulls":4},661905,0,3,3]
[{"$nulls":4},662390,0,3,3]
[{"$nulls":4},100142393,0,3,3]
[{"$nulls":4},103314323,0,3,3]
[{"$nulls":4},103314300,0,3,3]
[{"$nulls":4},661617,0,3,3]
[{"$nulls":4},663281,0,3,3]
[{"$nulls":4},663375,0,3,3]
[{"$nulls":4},663412,0,3,3]
[{"$nulls":4},663782,0,3,3]
[{"$nulls":4},663793,0,3,3]
[{"$nulls":4},663837,0,3,3]
[{"$nulls":4},103314330,0,3,3]
[{"$nulls":4},664114,0,3,3]
[{"$nulls":4},655154,0,3,3]
[{"$nulls":4},655550,0,3,3]
[{"$nulls":4},100142166,0,3,3]
[{"$nulls":4},659038,0,3,3]
[{"$nulls":4},660319,0,3,3]
[{"$nulls":4},660682,0,3,3]
[{"$nulls":4},103314342,0,3,3]
[{"$nulls":4},103314356,0,3,3]
[{"$nulls":4},103314375,0,3,3]
[{"$nulls":4},103314382,0,3,3]
[{"$nulls":4},103314369,0,3,3]
[{"$nulls":4},659813,0,3,3]
[{"$nulls":4},660698,0,3,3]
[{"$nulls":4},107398740,0,3,3]
[{"$nulls":4},656826,0,3,3]
[{"$nulls":4},657391,0,3,3]
[{"$nulls":4},660076,0,3,3]
[{"$nulls":4},659950,0,3,3]
[{"$nulls":4},103314420,0,3,3]
[{"$nulls":4},655175,0,3,3]
[{"$nulls":4},656159,0,3,{"$f":"SUM(F1970:G1970)","v":3}]
[{"$nulls":4},656492,0,3,3]
[{"$nulls":4},103314407,0,3,3]
[{"$nulls":4},658333,0,3,3]
[{"$nulls":4},107398764,0,3,3]
[{"$nulls":4},103314425,0,3,3]
[{"$nulls":4},661193,0,3,3]
[{"$nulls":4},103314533,0,3,3]
[{"$nulls":4},658561,0,3,3]
[{"$nulls":4},657081,0,3,3]
[{"$nulls":4},656407,0,3,3]
[{"$nulls":4},658002,0,3,3]
[{"$nulls":4},657687,0,3,3]
[{"$nulls":4},657380,0,3,3]
[{"$nulls":4},655977,0,3,3]
[{"$nulls":4},655401,0,3,3]
[{"$nulls":4},655162,0,3,3]
[{"$nulls":4},654853,0,3,3]
[{"$nulls":4},656244,0,3,3]
[{"$nulls":4},641605,0,3,3]
[{"$nulls":4},656575,0,3,3]
[{"$nulls":4},657395,0,3,3]
[{"$nulls":4},103314485,0,3,3]
[{"$nulls":4},659831,0,3,3]
[{"$nulls":4},107398813,0,3,3]
[{"$nulls":4},103313487,0,3,3]
[{"$nulls":4},655486,0,3,3]
[{"$nulls":4},656242,0,3,3]
[{"$nulls":4},100142406,0,3,3]
[{"$nulls":4},658848,0,3,3]
[{"$nulls":4},659298,0,3,3]
[{"$nulls":4},659629,0,3,3]
[{"$nulls":4},100141580,0,3,3]
[{"$nulls":4},107398856,0,3,3]
[{"$nulls":4},656314,0,3,3]
[{"$nulls":4},100142044,0,3,3]
[{"$nulls":4},103313364,0,3,3]
[{"$nulls":4},107398907,0,3,3]
[{"$nulls":4},107398926,0,3,3]
[{"$nulls":4},657385,0,3,3]
[{"$nulls":4},658247,0,3,3]
[{"$nulls":4},659131,0,3,3]
[{"$nulls":4},662692,0,3,3]
[{"$nulls":4},107398934,0,3,3]
[{"$nulls":4},107398947,0,3,3]
[{"$nulls":4},103315079,0,3,3]
[{"$nulls":4},100142089,0,3,3]
[{"$nulls":4},657056,0,3,3]
[{"$nulls":4},660633,0,3,3]
[{"$nulls":4},660688,0,3,3]
[{"$nulls":4},656812,0,3,3]
[{"$nulls":4},658475,0,3,3]
[{"$nulls":4},100142188,0,3,3]
[{"$nulls":4},100141865,0,3,3]
[{"$nulls":4},103314469,0,3,3]
[{"$nulls":4},107399080,0,3,3]
[{"$nulls":4},107399111,0,3,3]
[{"$nulls":4},107399134,0,3,3]
[{"$nulls":4},661821,0,3,3]
[{"$nulls":4},103312967,0,3,3]
[{"$nulls":4},103313415,0,3,3]
[{"$nulls":4},661744,0,3,3]
[{"$nulls":4},656900,0,3,3]
[{"$nulls":4},100381254,0,3,3]
[{"$nulls":4},103314992,0,3,{"$f":"SUM(F2034:G2034)","v":3}]
[{"$nulls":4},656824,0,3,3]
[{"$nulls":4},660918,0,3,3]
[{"$nulls":4},661247,0,3,3]
[{"$nulls":4},103315137,0,3,3]
[{"$nulls":4},664399,0,3,3]
[{"$nulls":4},107399253,0,3,3]
[{"$nulls":4},662180,0,3,3]
[{"$nulls":4},107397477,0,3,3]
[{"$nulls":4},100142039,0,3,3]
[{"$nulls":4},103312621,0,3,3]
[{"$nulls":4},103312650,0,3,3]
[{"$nulls":4},103312671,0,3,3]
[{"$nulls":4},664475,0,3,3]
[{"$nulls":4},103312704,0,3,3]
[{"$nulls":4},103312801,0,3,3]
[{"$nulls":4},657408,0,3,3]
[{"$nulls":4},103312978,0,3,3]
[{"$nulls":4},663096,0,3,3]
[{"$nulls":4},103313155,0,3,3]
[{"$nulls":4},103313180,0,3,3]
[{"$nulls":4},655605,0,3,3]
[{"$nulls":4},100142094,0,3,3]
[{"$nulls":4},660992,0,3,3]
[{"$nulls":4},103312193,0,3,3]
[{"$nulls":4},103312278,0,3,3]
[{"$nulls":4},661642,0,3,3]
[{"$nulls":4},100142445,0,3,3]
[{"$nulls":4},103313401,0,3,3]
[{"$nulls":4},107398090,0,3,3]
[{"$nulls":4},661158,0,3,3]
[{"$nulls":4},661553,0,3,3]
[{"$nulls":4},103313438,0,3,3]
[{"$nulls":4},103313474,0,3,3]
[{"$nulls":4},103313496,0,3,3]
[{"$nulls":4},661513,0,3,3]
[{"$nulls":4},661557,0,3,3]
[{"$nulls":4},659255,0,3,3]
[{"$nulls":4},655816,0,3,3]
[{"$nulls":4},660572,0,3,3]
[{"$nulls":4},103313618,0,3,3]
[{"$nulls":4},662999,0,3,3]
[{"$nulls":4},107398264,0,3,3]
[{"$nulls":4},655652,0,3,3]
[{"$nulls":4},663293,0,3,3]
[{"$nulls":4},107398307,0,3,3]
[{"$nulls":4},103313760,0,3,3]
[{"$nulls":4},107398410,0,3,3]
[{"$nulls":4},657901,0,3,3]
[{"$nulls":4},103313911,0,3,3]
[{"$nulls":4},107398491,0,3,3]
[{"$nulls":4},661279,0,3,3]
[{"$nulls":4},662274,0,3,3]
[{"$nulls":4},660896,0,3,3]
[{"$nulls":4},103314039,0,3,3]
[{"$nulls":4},663161,0,3,3]
[{"$nulls":4},107398541,0,3,3]
[{"$nulls":4},660559,0,3,3]
[{"$nulls":4},659032,0,3,3]
[{"$nulls":4},657143,0,3,3]
[{"$nulls":4},107398688,0,3,3]
[{"$nulls":4},661658,0,3,3]
[{"$nulls":4},100141926,0,3,3]
[{"$nulls":4},657288,0,3,3]
[{"$nulls":4},661404,0,3,{"$f":"SUM(F2098:G2098)","v":3}]
[{"$nulls":4},664031,0,3,3]
[{"$nulls":4},660849,0,3,3]
[{"$nulls":4},100142219,0,3,3]
[{"$nulls":4},100141690,0,3,3]
[{"$nulls":4},107398773,0,3,3]
[{"$nulls":4},656326,0,3,3]
[{"$nulls":4},658645,0,3,3]
[{"$nulls":4},658708,0,3,3]
[{"$nulls":4},657529,0,3,3]
[{"$nulls":4},663797,0,3,3]
[{"$nulls":4},107397981,0,3,3]
[{"$nulls":4},660828,0,3,3]
[{"$nulls":4},663188,0,3,3]

{"sheet":"L(High-quality)","index":5,"n_rows":1663,"n_cols":34,"rows_kept":1663}
["#","Chromosome","Region","Type","Reference","Allele","Zygosity","Count","Coverage","Frequency","Probability","Forward read count","Reverse read count","Forward/reverse balance","Average quality","Read count","Read coverage","# unique start positions","# unique end positions","BaseQRankSum","Read position test probability","Read direction test probability","Hyper-allelic","Genotype","Homopolymer","Homopolymer length","QUAL","Coding region change","Amino acid change","GCF_000002335.3_Tcas5.2_genomic_Gene","GeneID","description (GCF_000002335.3_Tcas5.2_genomic_Gene)","NCBI GENE description","NCBI GENE symbol"]
[1,"NC_007416.3",110744,"SNV","C","T","Heterozygous",8,20,40,1,7,1,0.12,38.5,8,23,5,7,1,0.18,0.16,"no","C/T","No",1,58.98,"XP_968029.3:c.[2479C>T]; XP_015838868.1:c.[2506C>T]; XP_008198519.1:c.[2050C>T]; XP_015839410.1:c.[2452C>T]","XP_968029.3:p.[Pro827Ser]; XP_015838868.1:p.[Pro836Ser]; XP_008198519.1:p.[Pro684Ser]; XP_015839410.1:p.[Pro818Ser]","LOC656402",656402,null,"656402 [Gene Symbol: LOC656402] [Locus Tag: TcasGA2_TC004671] [Chromosome: LGX] [Map Location: ] [Description: glycogenin-2] [Gene Type: protein-coding]","LOC656402; TcasGA2_TC004671"]
[2,"NC_007416.3",312110,"SNV","A","G","Homozygous",26,26,100,1,14,18,0.44,37.69,32,32,15,21,null,1,1,"no","G/G","No",1,98.15,"XP_015835038.1:c.2303T>C","XP_015835038.1:p.Phe768Ser","LOC657847",657847,null,"657847 [Gene Symbol: LOC657847] [Locus Tag: TcasGA2_TC034516] [Chromosome: LGX] [Map Location: ] [Description: latrophilin Cirl] [Gene Type: protein-coding]","TcasGA2_TC034516; LOC657847"]
[3,"NC_007416.3",495934,"SNV","C","T","Homozygous",21,21,100,1,13,8,0.38,38.67,21,21,12,17,null,1,1,"no","T/T","No",1,84.7,"XP_969675.1:c.[223G>A]; XP_008200361.1:c.[223G>A]","XP_969675.1:p.[Val75Met]; XP_008200361.1:p.[Val75Met]","LOC658173",658173,null,"658173 [Gene Symbol: LOC658173] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase] [Gene Type: protein-coding]","LOC658173"]
[4,"NC_007416.3","870326^870327","Insertion","-","AAACCC","Homozygous",20,20,100,1,14,11,0.44,35.99,25,25,14,17,null,1,1,"no","AAACCC/AAACCC","No",1,200,"XP_001812159.2:c.468_469insAAACCC","XP_001812159.2:p.Lys159_Asp160insProLys","LOC100142046",100142046,null,"100142046 [Gene Symbol: LOC100142046] [Locus Tag: TcasGA2_TC004652] [Chromosome: LGX] [Map Location: ] [Description: pollen-specific leucine-rich repeat extensin-like protein 1] [Gene Type: protein-coding]","TcasGA2_TC004652; LOC100142046"]
[5,"NC_007416.3",879126,"SNV","G","A","Homozygous",26,26,100,1,10,16,0.38,37.81,26,26,17,17,null,1,1,"no","A/A","No",1,99.74,"XP_008190742.1:c.[1374G>A]; XP_008190743.1:c.[1374G>A]; XP_008190744.1:c.[1374G>A]","XP_008190742.1:p.[Met458Ile]; XP_008190743.1:p.[Met458Ile]; XP_008190744.1:p.[Met458Ile]","LOC103312277",103312277,null,"103312277 [Gene Symbol: LOC103312277] [Locus Tag: TcasGA2_TC004654] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103312277] [Gene Type: protein-coding]","TcasGA2_TC004654; P54; LOC103312277"]
[6,"NC_007416.3",903965,"SNV","A","G","Homozygous",21,21,100,1,13,9,0.41,37.43,22,22,8,16,null,1,1,"no","G/G","No",1,83.1,"XP_008190734.1:c.[12T>C]; XP_008190735.1:c.[12T>C]; XP_008190729.1:c.[2T>C]; XP_008190728.1:c.[12T>C]; XP_008190730.1:c.[12T>C]; XP_015834686.1:c.[86+4465T>C]; XP_008190731.1:c.[12T>C]; XP_008190739.1:c.[86+4465T>C]; XP_008190733.1:c.[86+4465T>C]","XP_008190729.1:p.[Met1?]","LOC658988",658988,null,"658988 [Gene Symbol: LOC658988] [Locus Tag: TcasGA2_TC004710] [Chromosome: LGX] [Map Location: ] [Description: aryl hydrocarbon receptor nuclear translocator homolog] [Gene Type: protein-coding]","TcasGA2_TC004710; LOC658988"]
[7,"NC_007416.3",913712,"SNV","T","C","Homozygous",27,27,100,1,17,10,0.37,36.74,27,27,11,20,null,1,1,"no","C/C","No",1,101.18,"XP_015835886.1:c.[4366A>G]; XP_015835879.1:c.[4531A>G]; XP_015835888.1:c.[4351A>G]; XP_015835876.1:c.[4561A>G]; XP_015835885.1:c.[4576A>G]; XP_015835870.1:c.[4576A>G]; XP_015835893.1:c.[4240A>G]; XP_015835895.1:c.[3829A>G]; XP_015835892.1:c.[4270A>G]; XP_015835873.1:c.[4576A>G]; XP_015835881.1:c.[4510A>G]; XP_015835890.1:c.[4300A>G]; XP_015835866.1:c.[4576A>G]; XP_015835883.1:c.[4480A>G]","XP_015835886.1:p.[Ile1456Val]; XP_015835879.1:p.[Ile1511Val]; XP_015835888.1:p.[Ile1451Val]; XP_015835876.1:p.[Ile1521Val]; XP_015835885.1:p.[Ile1526Val]; XP_015835870.1:p.[Ile1526Val]; XP_015835893.1:p.[Ile1414Val]; XP_015835895.1:p.[Ile1277Val]; XP_015835892.1:p.[Ile1424Val]; XP_015835873.1:p.[Ile1526Val]; XP_015835881.1:p.[Ile1504Val]; XP_015835890.1:p.[Ile1434Val]; XP_015835866.1:p.[Ile1526Val]; XP_015835883.1:p.[Ile1494Val]","LOC100141763",100141763,null,"100141763 [Gene Symbol: LOC100141763] [Locus Tag: TcasGA2_TC004706] [Chromosome: LGX] [Map Location: LGX|LGX] [Description: agrin] [Gene Type: protein-coding]","LOC100141763; TcasGA2_TC004706"]
[8,"NC_007416.3",1026883,"SNV","G","A","Homozygous",20,20,100,1,15,5,0.25,37.95,20,20,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_969958.1:c.5G>A","XP_969958.1:p.Arg2Lys","LOC658481",658481,null,"658481 [Gene Symbol: LOC658481] [Locus Tag: TcasGA2_TC004657] [Chromosome: LGX] [Map Location: ] [Description: inactive pancreatic lipase-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC004657; LOC658481"]
[9,"NC_007416.3",1026894,"SNV","T","C","Homozygous",22,22,100,1,17,5,0.23,37.5,22,22,12,14,null,1,1,"no","C/C","No",1,86.13,"XP_969958.1:c.16T>C","XP_969958.1:p.Phe6Leu","LOC658481",658481,null,"658481 [Gene Symbol: LOC658481] [Locus Tag: TcasGA2_TC004657] [Chromosome: LGX] [Map Location: ] [Description: inactive pancreatic lipase-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC004657; LOC658481"]
[10,"NC_007416.3",1030420,"SNV","C","T","Homozygous",20,20,100,1,11,11,0.5,39.1,22,22,10,15,null,1,1,"no","T/T","No",1,81.69,"XP_008190720.1:c.[286G>A]; XP_015835927.1:c.[286G>A]","XP_008190720.1:p.[Val96Ile]; XP_015835927.1:p.[Val96Ile]","LOC103312271",103312271,null,"103312271 [Gene Symbol: LOC103312271] [Locus Tag: TcasGA2_TC004705] [Chromosome: LGX] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312271; TcasGA2_TC004705"]
[11,"NC_007416.3",1244148,"SNV","C","T","Homozygous",20,20,100,1,9,16,0.36,36.6,25,25,14,13,null,1,1,"no","T/T","No",1,81.7,"XP_001813427.1:c.[1264G>A]; XP_015835145.1:c.[1264G>A]; XP_008200248.1:c.[1264G>A]","XP_001813427.1:p.[Glu422Lys]; XP_015835145.1:p.[Glu422Lys]; XP_008200248.1:p.[Glu422Lys]","LOC100142250",100142250,null,"100142250 [Gene Symbol: LOC100142250] [Locus Tag: TcasGA2_TC001632] [Chromosome: LGX] [Map Location: ] [Description: pro-interleukin-16] [Gene Type: protein-coding]","LOC100142250; TcasGA2_TC001632"]
[12,"NC_007416.3",1277016,"SNV","G","C","Homozygous",20,20,100,1,13,14,0.48,36.45,27,27,11,12,null,1,1,"no","C/C","No",1,80.11,"XP_971720.1:c.535C>G","XP_971720.1:p.Arg179Gly","LOC660392",660392,null,"660392 [Gene Symbol: LOC660392] [Locus Tag: TcasGA2_TC001630] [Chromosome: LGX] [Map Location: ] [Description: very-long-chain 3-oxoacyl-CoA reductase] [Gene Type: protein-coding]","LOC660392; TcasGA2_TC001630"]
[13,"NC_007416.3",1317658,"SNV","T","G","Homozygous",23,23,100,1,9,18,0.33,36.3,27,27,15,14,null,1,1,"no","G/G","No",1,89.12,"XP_008200242.1:c.[152-605T>G]; XP_015835407.1:c.[151A>C]","XP_015835407.1:p.Ile51Leu","LOC659752, LOC103314874","659752 , 103314874",null,"659752 [Gene Symbol: LOC659752] [Locus Tag: TcasGA2_TC001611] [Chromosome: LGX] [Map Location: ] [Description: SEC23-interacting protein] [Gene Type: protein-coding] || 103314874 [Gene Symbol: LOC103314874] [Locus Tag: TcasGA2_TC001625] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314874] [Gene Type: protein-coding]","TcasGA2_TC001611; LOC659752 || LOC103314874; TcasGA2_TC001625"]
[14,"NC_007416.3",1318677,"SNV","T","C","Homozygous",20,20,100,1,16,8,0.33,36.25,24,24,8,16,null,1,1,"no","C/C","No",1,80.11,"XP_008200242.1:c.566T>C","XP_008200242.1:p.Leu189Pro","LOC659752",659752,null,"659752 [Gene Symbol: LOC659752] [Locus Tag: TcasGA2_TC001611] [Chromosome: LGX] [Map Location: ] [Description: SEC23-interacting protein] [Gene Type: protein-coding]","TcasGA2_TC001611; LOC659752"]
[15,"NC_007416.3",1657211,"SNV","T","C","Homozygous",25,25,100,1,15,14,0.48,37,29,29,13,19,null,1,1,"no","C/C","No",1,95.15,"XP_008200041.1:c.4717T>C","XP_008200041.1:p.Phe1573Leu","LOC656639",656639,null,"656639 [Gene Symbol: LOC656639] [Locus Tag: TcasGA2_TC004144] [Chromosome: LGX] [Map Location: ] [Description: plexin-B] [Gene Type: protein-coding]","LOC656639; TcasGA2_TC004144; PlexB"]
[16,"NC_007416.3",1730301,"SNV","C","A","Homozygous",23,23,100,1,15,12,0.44,37.87,27,27,13,17,null,1,1,"no","A/A","No",1,90.72,"XP_008200046.1:c.[9568C>A]; XP_008200047.1:c.[9568C>A]; XP_008200049.1:c.[9568C>A]; XP_008200048.1:c.[9568C>A]","XP_008200046.1:p.[Leu3190Ile]; XP_008200047.1:p.[Leu3190Ile]; XP_008200049.1:p.[Leu3190Ile]; XP_008200048.1:p.[Leu3190Ile]","LOC657452",657452,null,"657452 [Gene Symbol: LOC657452] [Locus Tag: TcasGA2_TC004152] [Chromosome: LGX] [Map Location: ] [Description: E3 ubiquitin-protein ligase HUWE1] [Gene Type: protein-coding]","HUWE1; LOC657452; TcasGA2_TC004152"]
[17,"NC_007416.3",1739695,"SNV","G","A","Homozygous",20,20,100,1,13,7,0.35,37.4,20,20,9,15,null,1,1,"no","A/A","No",1,81.69,"XP_969153.1:c.353G>A","XP_969153.1:p.Arg118His","LOC657609",657609,null,"657609 [Gene Symbol: LOC657609] [Locus Tag: TcasGA2_TC004153] [Chromosome: LGX] [Map Location: ] [Description: tyrosine-protein kinase shark] [Gene Type: protein-coding]","TcasGA2_TC004153; LOC657609"]
[18,"NC_007416.3",1783949,"SNV","C","T","Homozygous",25,25,100,1,12,18,0.4,36.72,30,30,15,19,null,1,1,"no","T/T","No",1,96.74,"XP_008200056.1:c.[392C>T]; XP_015833120.1:c.[163+5641G>A]; XP_008200057.1:c.[22+4085G>A]","XP_008200056.1:p.Ala131Val","LOC657688, LOC103314824","657688 , 103314824",null,"657688 [Gene Symbol: LOC657688] [Locus Tag: TcasGA2_TC004118] [Chromosome: LGX] [Map Location: ] [Description: Kv channel-interacting protein 4] [Gene Type: protein-coding] || 103314824 [Gene Symbol: LOC103314824] [Locus Tag: TcasGA2_TC004158] [Chromosome: LGX] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC657688; TcasGA2_TC004118 || LOC103314824; TcasGA2_TC004158"]
[19,"NC_007416.3",1832098,"SNV","C","A","Homozygous",25,25,100,1,12,13,0.48,36.8,25,25,16,16,null,1,1,"no","A/A","No",1,96.73,"XP_970018.1:c.427G>T","XP_970018.1:p.Ala143Ser","LOC658543",658543,null,"658543 [Gene Symbol: LOC658543] [Locus Tag: TcasGA2_TC004115] [Chromosome: LGX] [Map Location: ] [Description: glutathione-specific gamma-glutamylcyclotransferase 1] [Gene Type: protein-coding]","LOC658543; TcasGA2_TC004115"]
[20,"NC_007416.3",1844507,"SNV","C","T","Homozygous",20,20,100,1,20,3,0.13,37.2,23,23,12,15,null,1,1,"no","T/T","No",1,81.69,"XP_008200063.1:c.1423G>A","XP_008200063.1:p.Asp475Asn","LOC658619",658619,null,"658619 [Gene Symbol: LOC658619] [Locus Tag: TcasGA2_TC004114] [Chromosome: LGX] [Map Location: ] [Description: neurogenic locus protein delta] [Gene Type: protein-coding]","LOC658619; TcasGA2_TC004114"]
[22,"NC_007416.3",2920501,"SNV","C","G","Homozygous",40,40,100,1,30,12,0.29,38.77,42,42,15,22,null,1,1,"no","G/G","No",1,140.3,"XP_008193397.1:c.863G>C","XP_008193397.1:p.Gly288Ala","LOC656762",656762,null,"656762 [Gene Symbol: LOC656762] [Locus Tag: TcasGA2_TC013629] [Chromosome: LGX] [Map Location: ] [Description: nuclear pore complex protein Nup98-Nup96] [Gene Type: protein-coding]","TcasGA2_TC013629; LOC656762"]
[23,"NC_007416.3",2920537,"SNV","A","G","Homozygous",28,28,100,1,13,21,0.38,36.32,34,34,11,14,null,1,1,"no","G/G","No",1,104.17,"XP_008193397.1:c.827T>C","XP_008193397.1:p.Val276Ala","LOC656762",656762,null,"656762 [Gene Symbol: LOC656762] [Locus Tag: TcasGA2_TC013629] [Chromosome: LGX] [Map Location: ] [Description: nuclear pore complex protein Nup98-Nup96] [Gene Type: protein-coding]","TcasGA2_TC013629; LOC656762"]
[24,"NC_007416.3",2928445,"SNV","A","G","Homozygous",22,22,100,1,11,15,0.42,37,26,26,12,14,null,1,1,"no","G/G","No",1,86.11,"XP_015834239.1:c.[5947T>C]; XP_015834246.1:c.[5929T>C]; XP_015834242.1:c.[5947T>C]; XP_008193398.1:c.[5722T>C]","XP_015834239.1:p.[Ser1983Pro]; XP_015834246.1:p.[Ser1977Pro]; XP_015834242.1:p.[Ser1983Pro]; XP_008193398.1:p.[Ser1908Pro]","LOC657022",657022,null,"657022 [Gene Symbol: LOC657022] [Locus Tag: TcasGA2_TC013627] [Chromosome: LGX] [Map Location: ] [Description: centromere-associated protein E] [Gene Type: protein-coding]","TcasGA2_TC013627; LOC657022"]
[25,"NC_007416.3",2943877,"SNV","T","G","Homozygous",21,21,100,1,10,12,0.45,37.71,22,22,10,13,null,1,1,"no","G/G","No",1,83.1,"XP_008193404.1:c.[789A>C]; XP_968749.2:c.[792A>C]","XP_008193404.1:p.[Leu263Phe]; XP_968749.2:p.[Leu264Phe]","LOC657185",657185,null,"657185 [Gene Symbol: LOC657185] [Locus Tag: TcasGA2_TC013625] [Chromosome: LGX] [Map Location: ] [Description: ralA-binding protein 1] [Gene Type: protein-coding]","LOC657185; TcasGA2_TC013625"]
[26,"NC_007416.3",2972756,"SNV","T","C","Homozygous",21,21,100,1,11,13,0.46,38.38,24,24,14,18,null,1,1,"no","C/C","No",1,83.12,"XP_008193406.1:c.1264A>G","XP_008193406.1:p.Ser422Gly","LOC657569",657569,null,"657569 [Gene Symbol: LOC657569] [Locus Tag: TcasGA2_TC013622] [Chromosome: LGX] [Map Location: ] [Description: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1] [Gene Type: protein-coding]","LOC657569; TcasGA2_TC013622"]
[27,"NC_007416.3",3040171,"SNV","C","T","Homozygous",29,29,100,1,24,5,0.17,36.93,29,29,8,21,null,1,1,"no","T/T","No",1,108.77,"XP_008193408.1:c.1295G>A","XP_008193408.1:p.Arg432Gln","LOC658041",658041,null,"658041 [Gene Symbol: LOC658041] [Locus Tag: TcasGA2_TC013617] [Chromosome: LGX] [Map Location: ] [Description: heat shock protein DDB_G0288861] [Gene Type: protein-coding]","LOC658041; TcasGA2_TC013617"]
[28,"NC_007416.3",3040280,"SNV","C","G","Homozygous",36,37,97.3,1,8,30,0.21,38.22,38,39,13,14,null,0.99,1,"no","G/G","No",1,102.38,"XP_008193408.1:c.1186G>C","XP_008193408.1:p.Ala396Pro","LOC658041",658041,null,"658041 [Gene Symbol: LOC658041] [Locus Tag: TcasGA2_TC013617] [Chromosome: LGX] [Map Location: ] [Description: heat shock protein DDB_G0288861] [Gene Type: protein-coding]","LOC658041; TcasGA2_TC013617"]
[29,"NC_007416.3",3179954,"SNV","A","C","Homozygous",20,20,100,1,11,14,0.44,37,25,25,10,12,null,1,1,"no","C/C","No",1,80.11,"XP_008193419.1:c.263T>G","XP_008193419.1:p.Val88Gly","LOC103313033",103313033,null,"103313033 [Gene Symbol: LOC103313033] [Locus Tag: TcasGA2_TC013608] [Chromosome: LGX] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC013608; LOC103313033"]
[30,"NC_007416.3",3301414,"SNV","T","C","Homozygous",26,26,100,1,9,18,0.33,38.15,27,27,12,15,null,1,1,"no","C/C","No",1,98.17,"XP_015840937.1:c.[344T>C]; XP_008193439.1:c.[329T>C]; XP_966323.1:c.[329T>C]; XP_975780.1:c.[329T>C]","XP_015840937.1:p.[Ile115Thr]; XP_008193439.1:p.[Ile110Thr]; XP_966323.1:p.[Ile110Thr]; XP_975780.1:p.[Ile110Thr]","LOC659623",659623,null,"659623 [Gene Symbol: LOC659623] [Locus Tag: TcasGA2_TC014213] [Chromosome: LGX] [Map Location: ] [Description: beta-1,3-galactosyltransferase 5] [Gene Type: protein-coding]","TcasGA2_TC014213; LOC659623"]
[31,"NC_007416.3","3313378^3313379","Insertion","-","TGC","Homozygous",22,22,100,1,13,13,0.5,36.27,26,26,14,18,null,1,1,"no","TGC/TGC","No",1,200,"XP_001813884.2:c.[2504_2505insGCA]; XP_008193440.1:c.[2504_2505insGCA]","XP_001813884.2:p.[Gln835_Asn836insGln]; XP_008193440.1:p.[Gln835_Asn836insGln]","LOC660658",660658,null,"660658 [Gene Symbol: LOC660658] [Locus Tag: TcasGA2_TC013593] [Chromosome: LGX] [Map Location: ] [Description: histone-lysine N-methyltransferase, H3 lysine-79 specific] [Gene Type: protein-coding]","TcasGA2_TC013593; LOC660658"]
[32,"NC_007416.3",3424044,"SNV","T","A","Homozygous",21,21,100,1,11,10,0.48,36.14,21,21,9,11,null,1,1,"no","A/A","No",1,84.7,"XP_015833018.1:c.[179A>T]; XP_015833044.1:c.[179A>T]; XP_015833025.1:c.[179A>T]; XP_015833022.1:c.[179A>T]; XP_015833036.1:c.[179A>T]; XP_015833030.1:c.[179A>T]","XP_015833018.1:p.[Asp60Val]; XP_015833044.1:p.[Asp60Val]; XP_015833025.1:p.[Asp60Val]; XP_015833022.1:p.[Asp60Val]; XP_015833036.1:p.[Asp60Val]; XP_015833030.1:p.[Asp60Val]","LOC100141527",100141527,null,"100141527 [Gene Symbol: LOC100141527] [Locus Tag: TcasGA2_TC013586] [Chromosome: LGX] [Map Location: ] [Description: trithorax group protein osa] [Gene Type: protein-coding]","TcasGA2_TC013586; LOC100141527"]
[33,"NC_007416.3",3424108,"SNV","T","C","Homozygous",24,24,100,1,20,10,0.33,35.96,30,30,15,18,null,1,1,"no","C/C","No",1,92.14,"XP_015833036.1:c.[115A>G]; XP_015833018.1:c.[115A>G]; XP_015833022.1:c.[115A>G]; XP_015833025.1:c.[115A>G]; XP_015833044.1:c.[115A>G]; XP_015833030.1:c.[115A>G]","XP_015833036.1:p.[Arg39Gly]; XP_015833018.1:p.[Arg39Gly]; XP_015833022.1:p.[Arg39Gly]; XP_015833025.1:p.[Arg39Gly]; XP_015833044.1:p.[Arg39Gly]; XP_015833030.1:p.[Arg39Gly]","LOC100141527",100141527,null,"100141527 [Gene Symbol: LOC100141527] [Locus Tag: TcasGA2_TC013586] [Chromosome: LGX] [Map Location: ] [Description: trithorax group protein osa] [Gene Type: protein-coding]","TcasGA2_TC013586; LOC100141527"]
[34,"NC_007416.3",3424196,"SNV","G","C","Homozygous",20,20,100,1,4,17,0.19,37.15,21,21,11,12,null,1,1,"no","C/C","No",1,80.11,"XP_015833022.1:c.[27C>G]; XP_015833018.1:c.[27C>G]; XP_015833036.1:c.[27C>G]; XP_015833025.1:c.[27C>G]; XP_015833030.1:c.[27C>G]; XP_015833044.1:c.[27C>G]","XP_015833022.1:p.[His9Gln]; XP_015833018.1:p.[His9Gln]; XP_015833036.1:p.[His9Gln]; XP_015833025.1:p.[His9Gln]; XP_015833030.1:p.[His9Gln]; XP_015833044.1:p.[His9Gln]","LOC100141527",100141527,null,"100141527 [Gene Symbol: LOC100141527] [Locus Tag: TcasGA2_TC013586] [Chromosome: LGX] [Map Location: ] [Description: trithorax group protein osa] [Gene Type: protein-coding]","TcasGA2_TC013586; LOC100141527"]
[35,"NC_007416.3",3428438,"SNV","A","T","Homozygous",21,21,100,1,14,9,0.39,37.67,23,23,14,15,null,1,1,"no","T/T","No",1,84.7,"XP_001814310.1:c.515A>T","XP_001814310.1:p.Asn172Ile","LOC100142228",100142228,null,"100142228 [Gene Symbol: LOC100142228] [Locus Tag: TcasGA2_TC014218] [Chromosome: LGX] [Map Location: ] [Description: RNA pseudouridylate synthase domain-containing protein 1] [Gene Type: protein-coding]","LOC100142228; TcasGA2_TC014218"]
[36,"NC_007416.3",3487470,"SNV","G","C","Homozygous",25,25,100,1,14,13,0.48,37.96,27,27,14,18,null,1,1,"no","C/C","No",1,95.16,"XP_015833754.1:c.[5486G>C]; XP_008193469.1:c.[5471G>C]; XP_008193471.1:c.[5396G>C]; XP_015833763.1:c.[5465G>C]; XP_008193470.1:c.[5450G>C]","XP_015833754.1:p.[Ser1829Thr]; XP_008193469.1:p.[Ser1824Thr]; XP_008193471.1:p.[Ser1799Thr]; XP_015833763.1:p.[Ser1822Thr]; XP_008193470.1:p.[Ser1817Thr]","LOC661047",661047,null,"661047 [Gene Symbol: LOC661047] [Locus Tag: TcasGA2_TC014226] [Chromosome: LGX] [Map Location: ] [Description: kinesin 3A] [Gene Type: protein-coding]","TcasGA2_TC014226; kinesin-3A; LOC661047"]
[37,"NC_007416.3",3492097,"SNV","T","C","Homozygous",21,21,100,1,13,12,0.48,37.43,25,25,12,16,null,1,1,"no","C/C","No",1,83.13,"XP_008193472.1:c.997A>G","XP_008193472.1:p.Thr333Ala","LOC103313041",103313041,null,"103313041 [Gene Symbol: LOC103313041] [Locus Tag: TcasGA2_TC013580] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103313041] [Gene Type: protein-coding]","LOC103313041; TcasGA2_TC013580"]
[38,"NC_007416.3",3506898,"SNV","C","T","Homozygous",21,21,100,1,11,10,0.48,38.86,21,21,11,15,null,1,1,"no","T/T","No",1,84.7,"XP_015836098.1:c.[2204G>A]; XP_001814704.1:c.[2264G>A]","XP_015836098.1:p.[Gly735Glu]; XP_001814704.1:p.[Gly755Glu]","LOC100142224",100142224,null,"100142224 [Gene Symbol: LOC100142224] [Locus Tag: TcasGA2_TC013578] [Chromosome: LGX] [Map Location: ] [Description: zinc finger protein Xfin] [Gene Type: protein-coding]","TcasGA2_TC013578; LOC100142224"]
[39,"NC_007416.3",3591457,"SNV","C","T","Homozygous",20,20,100,1,8,14,0.36,39.45,22,22,14,13,null,1,1,"no","T/T","No",1,81.69,"XP_008193502.1:c.677C>T","XP_008193502.1:p.Thr226Ile","LOC662221",662221,null,"662221 [Gene Symbol: LOC662221] [Locus Tag: TcasGA2_TC014242] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC662221] [Gene Type: protein-coding]","TcasGA2_TC014242; LOC662221"]
[40,"NC_007416.3","3753452^3753453","Insertion","-","TT","Homozygous",21,25,84,1,9,12,0.43,38.46,21,25,13,15,2.81,0.79,0.99,"no","TT/TT","No",1,200,"XP_966761.1:c.[233_234insAA]; XP_008199827.1:c.[233_234insAA]","XP_966761.1:p.[Thr79fs]; XP_008199827.1:p.[Thr79fs]","LOC655160",655160,null,"655160 [Gene Symbol: LOC655160] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: cysteine-rich hydrophobic domain-containing protein 2] [Gene Type: protein-coding]","LOC655160"]
[41,"NC_007416.3",3877146,"SNV","T","C","Homozygous",25,25,100,1,16,15,0.48,38.56,31,31,15,18,null,1,1,"no","C/C","No",1,95.16,"XP_008199830.1:c.[368T>C]; XP_015836742.1:c.[368T>C]; XP_008199829.1:c.[368T>C]","XP_008199830.1:p.[Leu123Ser]; XP_015836742.1:p.[Leu123Ser]; XP_008199829.1:p.[Leu123Ser]","LOC103314770",103314770,null,"103314770 [Gene Symbol: LOC103314770] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: lymphoid-specific helicase-like] [Gene Type: protein-coding]","LOC103314770"]
[42,"NC_007416.3",3881460,"SNV","C","G","Homozygous",22,22,100,1,17,5,0.23,35.91,22,22,10,15,null,1,1,"no","G/G","No",1,86.11,"XP_008199831.1:c.[318C>G]; XP_015834832.1:c.[159C>G]","XP_008199831.1:p.[Asp106Glu]; XP_015834832.1:p.[Asp53Glu]","LOC103314771",103314771,null,"103314771 [Gene Symbol: LOC103314771] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314771] [Gene Type: protein-coding]","LOC103314771"]
[43,"NC_007416.3",3904377,"SNV","C","T","Homozygous",20,21,95.24,1,9,11,0.45,37.5,20,21,13,16,null,0.99,1,"no","T/T","No",1,53.05,"XP_008199839.1:c.1061G>A","XP_008199839.1:p.Gly354Asp","LOC656636",656636,null,"656636 [Gene Symbol: LOC656636] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: adenosylhomocysteinase 2-like] [Gene Type: protein-coding]","LOC656636"]
[44,"NC_007416.3",3905138,"SNV","A","G","Homozygous",24,24,100,1,18,11,0.38,36.29,29,29,13,15,null,1,1,"no","G/G","No",1,92.13,"XP_008199839.1:c.446T>C","XP_008199839.1:p.Leu149Ser","LOC656636",656636,null,"656636 [Gene Symbol: LOC656636] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: adenosylhomocysteinase 2-like] [Gene Type: protein-coding]","LOC656636"]
[45,"NC_007416.3",3905271,"SNV","G","A","Homozygous",30,30,100,1,12,26,0.32,36.83,38,38,14,17,null,1,1,"no","A/A","No",1,111.77,"XP_008199839.1:c.359C>T","XP_008199839.1:p.Ser120Leu","LOC656636",656636,null,"656636 [Gene Symbol: LOC656636] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: adenosylhomocysteinase 2-like] [Gene Type: protein-coding]","LOC656636"]
[46,"NC_007416.3","3905314^3905315","Insertion","-","A","Homozygous",22,22,100,1,9,17,0.35,37.14,26,26,13,14,null,1,1,"no","A/A","No",1,87.71,"XP_008199839.1:c.315_316insT","XP_008199839.1:p.Ala106fs","LOC656636",656636,null,"656636 [Gene Symbol: LOC656636] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: adenosylhomocysteinase 2-like] [Gene Type: protein-coding]","LOC656636"]
[47,"NC_007416.3",3907160,"SNV","C","G","Homozygous",23,23,100,1,8,18,0.31,36.7,26,26,12,15,null,1,1,"no","G/G","No",1,89.12,"XP_008199838.1:c.[267C>G]; XP_015840526.1:c.[267C>G]","XP_008199838.1:p.[Ile89Met]; XP_015840526.1:p.[Ile89Met]","LOC656803",656803,null,"656803 [Gene Symbol: LOC656803] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: eukaryotic translation initiation factor 2D] [Gene Type: protein-coding]","LOC656803"]
[49,"NC_007416.3",4485021,"SNV","G","A","Homozygous",25,25,100,1,8,19,0.3,36.32,27,27,15,16,null,1,1,"no","A/A","No",1,96.73,"XP_008200559.1:c.[350C>T]; XP_008200560.1:c.[350-3C>T]; XP_015833215.1:c.[7+7681G>A]","XP_008200559.1:p.Thr117Ile","LOC659958, LOC659760","659958 , 659760",null,"659958 [Gene Symbol: LOC659958] [Locus Tag: TcasGA2_TC004719] [Chromosome: LGX] [Map Location: ] [Description: nipped-B-like protein] [Gene Type: protein-coding] || 659760 [Gene Symbol: LOC659760] [Locus Tag: TcasGA2_TC004647] [Chromosome: LGX] [Map Location: ] [Description: cytosolic carboxypeptidase 6] [Gene Type: protein-coding]","TcasGA2_TC004719; LOC659958 || TcasGA2_TC004647; LOC659760"]
[50,"NC_007416.3",4628456,"SNV","A","G","Homozygous",21,21,100,1,10,11,0.48,37.14,21,21,13,16,null,1,1,"no","G/G","No",1,83.1,"XP_972507.2:c.697A>G","XP_972507.2:p.Thr233Ala","LOC661239",661239,null,"661239 [Gene Symbol: LOC661239] [Locus Tag: TcasGA2_TC005168] [Chromosome: LGX] [Map Location: ] [Description: putative GTP-binding protein 6] [Gene Type: protein-coding]","LOC661239; TcasGA2_TC005168"]
[51,"NC_007416.3",4641426,"SNV","T","C","Homozygous",23,23,100,1,16,11,0.41,37.74,27,27,14,16,null,1,1,"no","C/C","No",1,86.13,"XP_001810773.1:c.[568A>G]; XP_015833597.1:c.[343A>G]","XP_001810773.1:p.[Thr190Ala]; XP_015833597.1:p.[Thr115Ala]","LOC661025, LOC100142196","661025 , 100142196",null,"661025 [Gene Symbol: LOC661025] [Locus Tag: TcasGA2_TC005170] [Chromosome: LGX] [Map Location: ] [Description: nuclear protein MDM1] [Gene Type: protein-coding] || 100142196 [Gene Symbol: LOC100142196] [Locus Tag: TcasGA2_TC031524] [Chromosome: LGX] [Map Location: ] [Description: delta(24)-sterol reductase-like] [Gene Type: protein-coding]","TcasGA2_TC005170; LOC661025 || TcasGA2_TC031524; LOC100142196"]
[52,"NC_007416.3",4641739,"SNV","T","A","Homozygous",21,21,100,1,9,13,0.41,39.48,22,22,14,16,null,1,1,"no","A/A","No",1,84.7,"XP_001810773.1:c.[303A>T]; XP_015833597.1:c.[78A>T]","XP_001810773.1:p.[Glu101Asp]; XP_015833597.1:p.[Glu26Asp]","LOC661025, LOC100142196","661025 , 100142196",null,"661025 [Gene Symbol: LOC661025] [Locus Tag: TcasGA2_TC005170] [Chromosome: LGX] [Map Location: ] [Description: nuclear protein MDM1] [Gene Type: protein-coding] || 100142196 [Gene Symbol: LOC100142196] [Locus Tag: TcasGA2_TC031524] [Chromosome: LGX] [Map Location: ] [Description: delta(24)-sterol reductase-like] [Gene Type: protein-coding]","TcasGA2_TC005170; LOC661025 || TcasGA2_TC031524; LOC100142196"]
[53,"NC_007416.3",4939841,"SNV","A","T","Homozygous",22,23,95.65,1,6,19,0.24,36.45,25,26,13,12,null,1,1,"no","T/T","No",1,61.6,"XP_966867.1:c.807A>T","XP_966867.1:p.Glu269Asp","LOC660971",660971,null,"660971 [Gene Symbol: LOC660971] [Locus Tag: TcasGA2_TC031545] [Chromosome: LGX] [Map Location: ] [Description: EH domain-containing protein 3-like] [Gene Type: protein-coding]","LOC660971; TcasGA2_TC031545"]
[54,"NC_007416.3",4939848,"SNV","A","G","Homozygous",21,21,100,1,5,18,0.22,36.19,23,23,14,13,null,1,1,"no","G/G","No",1,83.1,"XP_966867.1:c.814A>G","XP_966867.1:p.Lys272Glu","LOC660971",660971,null,"660971 [Gene Symbol: LOC660971] [Locus Tag: TcasGA2_TC031545] [Chromosome: LGX] [Map Location: ] [Description: EH domain-containing protein 3-like] [Gene Type: protein-coding]","LOC660971; TcasGA2_TC031545"]
[55,"NC_007416.3",4971107,"SNV","T","G","Homozygous",21,21,100,1,8,16,0.33,38.57,24,24,13,16,null,1,1,"no","G/G","No",1,83.1,"XP_973837.1:c.77A>C","XP_973837.1:p.Tyr26Ser","LOC662660",662660,null,"662660 [Gene Symbol: LOC662660] [Locus Tag: TcasGA2_TC010884] [Chromosome: LGX] [Map Location: ] [Description: BCL2/adenovirus E1B 19 kDa protein-interacting protein 3] [Gene Type: protein-coding]","TcasGA2_TC010884; LOC662660"]
[57,"NC_007416.3",5545324,"SNV","G","A","Homozygous",20,20,100,1,10,10,0.5,40.15,20,20,13,13,null,1,1,"no","A/A","No",1,81.69,"XP_971882.1:c.680G>A","XP_971882.1:p.Arg227Lys","LOC660567",660567,null,"660567 [Gene Symbol: LOC660567] [Locus Tag: TcasGA2_TC010791] [Chromosome: LGX] [Map Location: ] [Description: deoxynucleoside kinase] [Gene Type: protein-coding]","TcasGA2_TC010791; LOC660567"]
[58,"NC_007416.3",5841812,"SNV","C","G","Homozygous",21,21,100,1,12,16,0.43,38.43,28,28,13,14,null,1,1,"no","G/G","No",1,83.1,"XP_015839288.1:c.157C>G","XP_015839288.1:p.Gln53Glu","LOC659419",659419,null,"659419 [Gene Symbol: LOC659419] [Locus Tag: TcasGA2_TC010801] [Chromosome: LGX] [Map Location: ] [Description: dynein heavy chain 7, axonemal] [Gene Type: protein-coding]","LOC659419; TcasGA2_TC010801"]
[59,"NC_007416.3","5862849..5862850","MNV","TG","CA","Heterozygous",7,20,35,1,6,1,0.14,39.86,7,21,3,4,null,0.1,0.93,"no","complex","No",1,200,"XP_970551.1:c.[1571_1572delCAinsTG]; XP_015836824.1:c.[1571_1572delCAinsTG]","XP_970551.1:p.[Ala524Val]; XP_015836824.1:p.[Ala524Val]","LOC659126",659126,null,"659126 [Gene Symbol: LOC659126] [Locus Tag: TcasGA2_TC010840] [Chromosome: LGX] [Map Location: ] [Description: nuclear polyadenylated RNA-binding protein 3] [Gene Type: protein-coding]","LOC659126; TcasGA2_TC010840"]
[60,"NC_007416.3",5862850,"SNV","G","A","Heterozygous",13,20,65,1,10,4,0.29,35.38,14,21,11,12,null,0.54,0.99,"no","complex","No",1,200,"XP_015836824.1:c.[1571C>T]; XP_970551.1:c.[1571C>T]","XP_015836824.1:p.[Ala524Val]; XP_970551.1:p.[Ala524Val]","LOC659126",659126,null,"659126 [Gene Symbol: LOC659126] [Locus Tag: TcasGA2_TC010840] [Chromosome: LGX] [Map Location: ] [Description: nuclear polyadenylated RNA-binding protein 3] [Gene Type: protein-coding]","LOC659126; TcasGA2_TC010840"]
[65,"NC_007416.3",6007445,"SNV","G","C","Homozygous",23,23,100,1,2,22,0.08,39.04,24,24,10,11,null,1,1,"no","C/C","No",1,89.14,"XP_969735.1:c.1131G>C","XP_969735.1:p.Glu377Asp","LOC658236",658236,null,"658236 [Gene Symbol: LOC658236] [Locus Tag: TcasGA2_TC010817] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC658236] [Gene Type: protein-coding]","LOC658236; TcasGA2_TC010817"]
[66,"NC_007416.3",6297070,"SNV","A","G","Homozygous",22,22,100,1,13,13,0.5,38.41,26,26,14,15,null,1,1,"no","G/G","No",1,86.11,"XP_967484.2:c.246A>G","XP_967484.2:p.Ile82Met","LOC655828",655828,null,"655828 [Gene Symbol: LOC655828] [Locus Tag: TcasGA2_TC004742] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC655828] [Gene Type: protein-coding]","LOC655828; TcasGA2_TC004742"]
[67,"NC_007416.3","6375294..6375295","MNV","AC","GT","Heterozygous",11,28,39.29,1,8,3,0.27,36.85,11,30,6,8,-1.66,0.6,1,"no","complex","No",1,200,"XP_968183.1:c.1726_1727delACinsGT","XP_968183.1:p.Thr576Val","LOC656569",656569,null,"656569 [Gene Symbol: LOC656569] [Locus Tag: TcasGA2_TC004751] [Chromosome: LGX] [Map Location: ] [Description: kinesin-like protein KIF11-B] [Gene Type: protein-coding]","TcasGA2_TC004751; LOC656569"]
[69,"NC_007416.3","6535462^6535463","Insertion","-","T","Homozygous",25,25,100,1,14,11,0.44,36.24,25,25,16,17,null,1,1,"no","T/T","No",1,96.74,"XP_015834338.1:c.3069_3070insT","XP_015834338.1:p.Ser1024fs","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[70,"NC_007416.3",6535545,"SNV","T","A","Homozygous",26,26,100,1,11,16,0.41,36.62,27,27,16,17,null,1,1,"no","A/A","No",1,99.74,"XP_015834338.1:c.3152T>A","XP_015834338.1:p.Leu1051*","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[71,"NC_007416.3",6535686,"SNV","G","T","Heterozygous",8,21,38.1,1,5,4,0.44,37.62,9,24,4,6,-0.27,0.9,1,"no","G/T","No",1,53.91,"XP_015834338.1:c.3293G>T","XP_015834338.1:p.Arg1098Leu","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[72,"NC_007416.3",7398998,"SNV","C","G","Homozygous",21,21,100,1,5,19,0.21,35.43,24,24,10,11,null,1,1,"no","G/G","No",1,83.1,"XP_008200761.1:c.[476C>G]; XP_015840859.1:c.[476C>G]","XP_008200761.1:p.[Thr159Ser]; XP_015840859.1:p.[Thr159Ser]","LOC661242",661242,null,"661242 [Gene Symbol: LOC661242] [Locus Tag: TcasGA2_TC004799] [Chromosome: LGX] [Map Location: ] [Description: dnaJ protein homolog 1] [Gene Type: protein-coding]","TcasGA2_TC004799; LOC661242"]
[73,"NC_007416.3","7404889..7404890","MNV","GT","AG","Homozygous",20,20,100,1,16,4,0.2,38.4,20,20,11,15,null,1,1,"no","AG/AG","No",1,200,"XP_015840803.1:c.[434_435delACinsCT]; XP_008200769.1:c.[434_435delACinsCT]; XP_015840796.1:c.[518_519delACinsCT]; XP_015840811.1:c.[320_321delACinsCT]; XP_015840810.1:c.[434_435delACinsCT]","XP_015840803.1:p.[Asp145Ala]; XP_008200769.1:p.[Asp145Ala]; XP_015840796.1:p.[Asp173Ala]; XP_015840811.1:p.[Asp107Ala]; XP_015840810.1:p.[Asp145Ala]","LOC661785",661785,null,"661785 [Gene Symbol: LOC661785] [Locus Tag: TcasGA2_TC004579] [Chromosome: LGX] [Map Location: ] [Description: peroxidase] [Gene Type: protein-coding]","LOC661785; TcasGA2_TC004579"]
[74,"NC_007416.3",7405013,"SNV","C","G","Homozygous",29,29,100,1,10,19,0.34,38.59,29,29,15,23,null,1,1,"no","G/G","No",1,107.17,"XP_015840796.1:c.[395G>C]; XP_015840803.1:c.[311G>C]; XP_015840811.1:c.[197G>C]; XP_015840810.1:c.[311G>C]; XP_008200769.1:c.[311G>C]","XP_015840796.1:p.[Ser132Thr]; XP_015840803.1:p.[Ser104Thr]; XP_015840811.1:p.[Ser66Thr]; XP_015840810.1:p.[Ser104Thr]; XP_008200769.1:p.[Ser104Thr]","LOC661785",661785,null,"661785 [Gene Symbol: LOC661785] [Locus Tag: TcasGA2_TC004579] [Chromosome: LGX] [Map Location: ] [Description: peroxidase] [Gene Type: protein-coding]","LOC661785; TcasGA2_TC004579"]
[75,"NC_007416.3",7405139,"SNV","C","T","Homozygous",25,25,100,1,5,21,0.19,38.56,26,26,10,12,null,1,1,"no","T/T","No",1,96.74,"XP_015840811.1:c.[71G>A]; XP_015840803.1:c.[185G>A]; XP_015840810.1:c.[185G>A]; XP_008200769.1:c.[185G>A]; XP_015840796.1:c.[269G>A]","XP_015840811.1:p.[Arg24Lys]; XP_015840803.1:p.[Arg62Lys]; XP_015840810.1:p.[Arg62Lys]; XP_008200769.1:p.[Arg62Lys]; XP_015840796.1:p.[Arg90Lys]","LOC661785",661785,null,"661785 [Gene Symbol: LOC661785] [Locus Tag: TcasGA2_TC004579] [Chromosome: LGX] [Map Location: ] [Description: peroxidase] [Gene Type: protein-coding]","LOC661785; TcasGA2_TC004579"]
[76,"NC_007416.3","7592673^7592674","Insertion","-","CT","Heterozygous",7,20,35,1,5,2,0.29,36.64,7,25,5,7,0.31,0.69,0.87,"no","complex","No",1,200,"XP_015840777.1:c.[391+79935_391+79936insCT]; XP_015840873.1:c.[69_70insCT]; XP_015840780.1:c.[199+79935_199+79936insCT]","XP_015840873.1:p.Ser25fs","LOC660322, LOC107399269","660322 , 107399269",null,"660322 [Gene Symbol: LOC660322] [Locus Tag: TcasGA2_TC001692] [Chromosome: LGX] [Map Location: ] [Description: zinc finger protein basonuclin-2] [Gene Type: protein-coding] || 107399269 [Gene Symbol: LOC107399269] [Locus Tag: TcasGA2_TC031582] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC107399269] [Gene Type: protein-coding]","disco-r; TcasGA2_TC001692; LOC660322 || LOC107399269; TcasGA2_TC031582"]
[77,"NC_007416.3",7923356,"SNV","C","T","Homozygous",22,22,100,1,11,12,0.48,35.27,23,23,11,14,null,1,1,"no","T/T","No",1,87.71,"XP_008199058.1:c.1012G>A","XP_008199058.1:p.Ala338Thr","LOC658611",658611,null,"658611 [Gene Symbol: LOC658611] [Locus Tag: TcasGA2_TC001759] [Chromosome: LGX] [Map Location: ] [Description: rho guanine nucleotide exchange factor 17] [Gene Type: protein-coding]","TcasGA2_TC001759; LOC658611"]
[79,"NC_007416.3",8671088,"SNV","C","A","Heterozygous",23,35,65.71,1,17,7,0.29,37.57,24,36,16,17,0.14,0.97,0.99,"no","A/C","No",1,69.08,"XP_008199007.1:c.[584C>A]; XP_008199008.1:c.[527C>A]; XP_015836611.1:c.[527C>A]","XP_008199007.1:p.[Ala195Glu]; XP_008199008.1:p.[Ala176Glu]; XP_015836611.1:p.[Ala176Glu]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[80,"NC_007416.3",8671200,"SNV","A","T","Heterozygous",13,44,29.55,1,10,4,0.29,39,14,47,7,7,-0.28,0.68,0.66,"no","A/T","No",1,55.98,"XP_015836611.1:c.[639A>T]; XP_008199007.1:c.[696A>T]; XP_008199008.1:c.[639A>T]","XP_015836611.1:p.[Lys213Asn]; XP_008199007.1:p.[Lys232Asn]; XP_008199008.1:p.[Lys213Asn]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[81,"NC_007416.3",8671411,"SNV","G","A","Heterozygous",21,45,46.67,1,11,15,0.42,39.38,26,58,11,12,2.8,0.27,1,"no","A/G","No",1,153.53,"XP_008199007.1:c.[907G>A]; XP_015836611.1:c.[850G>A]; XP_008199008.1:c.[850G>A]","XP_008199007.1:p.[Ala303Thr]; XP_015836611.1:p.[Ala284Thr]; XP_008199008.1:p.[Ala284Thr]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[83,"NC_007417.3",501203,"SNV","A","G","Homozygous",22,22,100,1,13,13,0.5,38.5,26,26,11,13,null,1,1,"no","G/G","No",1,86.11,"XP_015837142.1:c.184A>G","XP_015837142.1:p.Thr62Ala","LOC107398244",107398244,null,"107398244 [Gene Symbol: LOC107398244] [Locus Tag: TcasGA2_TC030400] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC107398244] [Gene Type: protein-coding]","TcasGA2_TC030400; LOC107398244; Or263"]
[85,"NC_007417.3",1910805,"Deletion","T","-","Homozygous",26,26,100,1,14,15,0.48,37.85,29,29,19,20,null,1,1,"no","-/-","No",1,108.77,"XP_015837412.1:c.377delA","XP_015837412.1:p.His126fs","LOC658166, LOC107398294","658166 , 107398294",null,"658166 [Gene Symbol: LOC658166] [Locus Tag: TcasGA2_TC005236] [Chromosome: LG2] [Map Location: ] [Description: thrombospondin type-1 domain-containing protein 1] [Gene Type: protein-coding] || 107398294 [Gene Symbol: LOC107398294] [Locus Tag: TcasGA2_TC032004] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC107398294] [Gene Type: protein-coding]","TcasGA2_TC005236; LOC658166 || LOC107398294; TcasGA2_TC032004"]
[86,"NC_007417.3",1910836,"SNV","T","C","Homozygous",25,25,100,1,11,16,0.41,39.64,27,27,17,18,null,1,1,"no","C/C","No",1,95.16,"XP_015837412.1:c.346A>G","XP_015837412.1:p.Met116Val","LOC658166, LOC107398294","658166 , 107398294",null,"658166 [Gene Symbol: LOC658166] [Locus Tag: TcasGA2_TC005236] [Chromosome: LG2] [Map Location: ] [Description: thrombospondin type-1 domain-containing protein 1] [Gene Type: protein-coding] || 107398294 [Gene Symbol: LOC107398294] [Locus Tag: TcasGA2_TC032004] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC107398294] [Gene Type: protein-coding]","TcasGA2_TC005236; LOC658166 || LOC107398294; TcasGA2_TC032004"]
[87,"NC_007417.3",2411347,"SNV","G","A","Homozygous",21,21,100,1,12,9,0.43,39.19,21,21,14,12,null,1,1,"no","A/A","No",1,84.7,"XP_015838988.1:c.1475C>T","XP_015838988.1:p.Thr492Ile","LOC100141711",100141711,null,"100141711 [Gene Symbol: LOC100141711] [Locus Tag: TcasGA2_TC004562] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC100141711] [Gene Type: protein-coding]","LOC100141711; TcasGA2_TC004562"]
[88,"NC_007417.3",2411359,"SNV","A","G","Homozygous",20,20,100,1,12,8,0.4,39.1,20,20,13,12,null,1,1,"no","G/G","No",1,80.09,"XP_015838988.1:c.1463T>C","XP_015838988.1:p.Ile488Thr","LOC100141711",100141711,null,"100141711 [Gene Symbol: LOC100141711] [Locus Tag: TcasGA2_TC004562] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC100141711] [Gene Type: protein-coding]","LOC100141711; TcasGA2_TC004562"]
[91,"NC_007417.3",3665163,"SNV","C","T","Heterozygous",10,20,50,1,8,5,0.38,37.7,13,26,6,9,0.53,0.7,1,"no","C/T","No",1,81.97,"XP_015839059.1:c.2110G>A","XP_015839059.1:p.Glu704Lys","LOC658704",658704,null,"658704 [Gene Symbol: LOC658704] [Locus Tag: TcasGA2_TC004504] [Chromosome: LG2] [Map Location: ] [Description: protein FAM184A] [Gene Type: protein-coding]","TcasGA2_TC004504; LOC658704"]
[92,"NC_007417.3",3665178,"SNV","C","T","Homozygous",21,21,100,1,14,10,0.42,37.57,24,24,12,16,null,1,1,"no","T/T","No",1,84.71,"XP_015839059.1:c.2095G>A","XP_015839059.1:p.Gly699Arg","LOC658704",658704,null,"658704 [Gene Symbol: LOC658704] [Locus Tag: TcasGA2_TC004504] [Chromosome: LG2] [Map Location: ] [Description: protein FAM184A] [Gene Type: protein-coding]","TcasGA2_TC004504; LOC658704"]
[93,"NC_007417.3",3666810,"SNV","G","T","Homozygous",22,22,100,1,10,19,0.34,38.95,29,29,12,13,null,1,1,"no","T/T","No",1,87.71,"XP_015839059.1:c.671C>A","XP_015839059.1:p.Thr224Asn","LOC658704",658704,null,"658704 [Gene Symbol: LOC658704] [Locus Tag: TcasGA2_TC004504] [Chromosome: LG2] [Map Location: ] [Description: protein FAM184A] [Gene Type: protein-coding]","TcasGA2_TC004504; LOC658704"]
[95,"NC_007417.3",3757790,"SNV","T","C","Homozygous",20,20,100,1,12,14,0.46,39.6,26,26,11,14,null,1,1,"no","C/C","No",1,80.12,"XP_008200886.1:c.428A>G","XP_008200886.1:p.His143Arg","LOC659762",659762,null,"659762 [Gene Symbol: LOC659762] [Locus Tag: TcasGA2_TC004496] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: Fanconi anemia group I protein homolog] [Gene Type: protein-coding]","TcasGA2_TC004496; LOC659762"]
[96,"NC_007417.3",4308521,"SNV","G","T","Homozygous",22,22,100,1,11,12,0.48,36.5,23,23,16,13,null,1,1,"no","T/T","No",1,87.71,"XP_976370.1:c.673C>A","XP_976370.1:p.Pro225Thr","LOC661087",661087,null,"661087 [Gene Symbol: LOC661087] [Locus Tag: TcasGA2_TC004478] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC661087] [Gene Type: protein-coding]","LOC661087; TcasGA2_TC004478"]
[97,"NC_007417.3","4567739..4567741","Deletion","CGA","-","Homozygous",21,21,100,1,11,10,0.48,35.05,21,21,7,14,null,1,1,"no","-/-","No",1,200,"XP_008200863.1:c.818_820delCGA","XP_008200863.1:p.Thr279del","Srf",661307,"serum response factor","661307 [Gene Symbol: Srf] [Locus Tag: TcasGA2_TC004911] [Chromosome: LG2] [Map Location: ] [Description: serum response factor] [Gene Type: protein-coding]","Srf; bs; TcasGA2_TC004911"]
[99,"NC_007417.3",4933116,"SNV","T","A","Homozygous",22,22,100,1,9,14,0.39,37.77,23,23,12,12,null,1,1,"no","A/A","No",1,87.7,"XP_967796.2:c.4030A>T","XP_967796.2:p.Thr1344Ser","LOC656158",656158,null,"656158 [Gene Symbol: LOC656158] [Locus Tag: TcasGA2_TC004438] [Chromosome: LG2] [Map Location: ] [Description: toll-like receptor 3] [Gene Type: protein-coding]","LOC656158; Toll3; TcasGA2_TC004438"]
[100,"NC_007417.3",4949349,"SNV","G","C","Homozygous",20,20,100,1,6,15,0.29,38.1,21,21,9,10,null,1,1,"no","C/C","No",1,80.12,"XP_015838527.1:c.[221G>C]; XP_008200948.1:c.[221G>C]","XP_015838527.1:p.[Ser74Thr]; XP_008200948.1:p.[Ser74Thr]","LOC103315046",103315046,null,"103315046 [Gene Symbol: LOC103315046] [Locus Tag: TcasGA2_TC004945] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315046] [Gene Type: protein-coding]","LOC103315046; TcasGA2_TC004945"]
[101,"NC_007417.3",4949357,"SNV","A","G","Homozygous",20,20,100,1,6,15,0.29,38.75,21,21,9,10,null,1,1,"no","G/G","No",1,80.09,"XP_015838527.1:c.[229A>G]; XP_008200948.1:c.[229A>G]","XP_015838527.1:p.[Thr77Ala]; XP_008200948.1:p.[Thr77Ala]","LOC103315046",103315046,null,"103315046 [Gene Symbol: LOC103315046] [Locus Tag: TcasGA2_TC004945] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315046] [Gene Type: protein-coding]","LOC103315046; TcasGA2_TC004945"]
[104,"NC_007417.3",4993520,"SNV","A","T","Heterozygous",11,33,33.33,1,6,6,0.5,40.09,12,34,8,10,2.58,0.61,0.96,"no","A/T","No",1,61.09,"XP_008200957.1:c.1712A>T","XP_008200957.1:p.Asn571Ile","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[105,"NC_007417.3",4993538,"SNV","C","T","Heterozygous",10,30,33.33,1,5,5,0.5,39,10,30,7,9,0.77,0.23,0.88,"no","C/T","No",1,56.49,"XP_008200957.1:c.1730C>T","XP_008200957.1:p.Thr577Ile","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[110,"NC_007417.3",4993665,"SNV","G","T","Heterozygous",9,26,34.62,1,9,0,0,39.67,9,28,5,6,1.05,0.08,0.17,"no","G/T","No",1,51.55,"XP_008200957.1:c.1857G>T","XP_008200957.1:p.Leu619Phe","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[111,"NC_007417.3",4993677,"SNV","G","T","Homozygous",27,27,100,1,20,11,0.35,38.56,31,31,17,19,null,1,1,"no","T/T","No",1,102.75,"XP_008200957.1:c.1869G>T","XP_008200957.1:p.Glu623Asp","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[112,"NC_007417.3",5326665,"SNV","C","G","Homozygous",27,27,100,1,16,14,0.47,38.74,30,30,11,18,null,1,1,"no","G/G","No",1,101.16,"XP_008200967.1:c.1118C>G","XP_008200967.1:p.Ala373Gly","LOC658845",658845,null,"658845 [Gene Symbol: LOC658845] [Locus Tag: TcasGA2_TC004966] [Chromosome: LG2] [Map Location: ] [Description: saccharopine dehydrogenase-like oxidoreductase] [Gene Type: protein-coding]","TcasGA2_TC004966; LOC658845"]
[113,"NC_007417.3",5843689,"SNV","G","C","Homozygous",23,23,100,1,14,9,0.39,37.43,23,23,15,14,null,1,1,"no","C/C","No",1,89.14,"XP_015840675.1:c.[1205G>C]; XP_015840663.1:c.[1032+773C>G]; XP_015840664.1:c.[1037+410C>G]","XP_015840675.1:p.Arg402Pro","LOC103315127, LOC100142296","103315127 , 100142296",null,"103315127 [Gene Symbol: LOC103315127] [Locus Tag: TcasGA2_TC000761] [Chromosome: LG2] [Map Location: ] [Description: regulator of hypoxia-inducible factor 1] [Gene Type: protein-coding] || 100142296 [Gene Symbol: LOC100142296] [Locus Tag: TcasGA2_TC000801] [Chromosome: LG2] [Map Location: ] [Description: RNA polymerase II-associated factor 1 homolog] [Gene Type: protein-coding]","LOC103315127; TcasGA2_TC000761 || TcasGA2_TC000801; LOC100142296"]
[114,"NC_007417.3",5912038,"SNV","T","A","Homozygous",21,21,100,1,7,19,0.27,38.71,26,26,14,12,null,1,1,"no","A/A","No",1,84.69,"XP_008201329.1:c.31A>T","XP_008201329.1:p.Ile11Phe","LOC103315156",103315156,null,"103315156 [Gene Symbol: LOC103315156] [Locus Tag: TcasGA2_TC032050] [Chromosome: LG2] [Map Location: ] [Description: leucine-rich repeat-containing G-protein coupled receptor 4-like] [Gene Type: protein-coding]","LOC103315156; TcasGA2_TC032050"]
[115,"NC_007417.3",6610230,"SNV","A","G","Homozygous",20,20,100,1,4,17,0.19,38.65,21,21,12,14,null,1,1,"no","G/G","No",1,80.09,"XP_008201369.1:c.640A>G","XP_008201369.1:p.Asn214Asp","LOC663324",663324,null,"663324 [Gene Symbol: LOC663324] [Locus Tag: TcasGA2_TC030989] [Chromosome: LG2] [Map Location: ] [Description: anosmin-1] [Gene Type: protein-coding]","TcasGA2_TC030989; LOC663324"]
[116,"NC_007417.3",6615915,"SNV","T","C","Homozygous",20,20,100,1,6,16,0.27,39.85,22,22,15,11,null,1,1,"no","C/C","No",1,80.12,"XP_008201370.1:c.349T>C","XP_008201370.1:p.Ser117Pro","LOC103315168",103315168,null,"103315168 [Gene Symbol: LOC103315168] [Locus Tag: TcasGA2_TC000840] [Chromosome: LG2] [Map Location: ] [Description: zinc finger protein 557] [Gene Type: protein-coding]","LOC103315168; TcasGA2_TC000840"]
[117,"NC_007417.3",6719990,"SNV","A","G","Homozygous",22,22,100,1,9,20,0.31,35.27,29,29,8,9,null,1,1,"no","G/G","No",1,86.11,"XP_015840913.1:c.115T>C","XP_015840913.1:p.Ser39Pro","LOC107399279",107399279,null,"107399279 [Gene Symbol: LOC107399279] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: odorant receptor Or1-like] [Gene Type: protein-coding]","LOC107399279"]
[118,"NC_007417.3",6859990,"SNV","C","T","Homozygous",21,21,100,1,19,3,0.14,36.48,22,22,9,15,null,1,1,"no","T/T","No",1,84.7,"XP_015840479.1:c.[441+8526C>T]; XP_008201382.2:c.[441+8526C>T]; XP_015839833.1:c.[829G>A]; XP_015840483.1:c.[441+8526C>T]; XP_015840482.1:c.[441+8526C>T]; XP_015840480.1:c.[441+8526C>T]","XP_015839833.1:p.Gly277Ser","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[119,"NC_007417.3",6867131,"SNV","A","G","Homozygous",20,20,100,1,10,12,0.45,36.7,22,22,10,10,null,1,1,"no","G/G","No",1,80.09,"XP_015840480.1:c.[441+15667A>G]; XP_015840483.1:c.[441+15667A>G]; XP_015839837.1:c.[412T>C]; XP_015840479.1:c.[441+15667A>G]; XP_008201382.2:c.[441+15667A>G]; XP_015840482.1:c.[441+15667A>G]","XP_015839837.1:p.Ser138Pro","LOC663521, LOC103315172","663521 , 103315172",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 103315172 [Gene Symbol: LOC103315172] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: larval cuticle protein A2B-like] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || LOC103315172"]
[120,"NC_007417.3",7151947,"SNV","A","G","Homozygous",21,21,100,1,8,14,0.36,36.57,22,22,11,13,null,1,1,"no","G/G","No",1,83.1,"XP_015840449.1:c.[40-21552T>C]; XP_008201399.1:c.[170A>G]","XP_008201399.1:p.Lys57Arg","LOC663672, LOC103315177","663672 , 103315177",null,"663672 [Gene Symbol: LOC663672] [Locus Tag: TcasGA2_TC000706] [Chromosome: LG2] [Map Location: ] [Description: protein sprint] [Gene Type: protein-coding] || 103315177 [Gene Symbol: LOC103315177] [Locus Tag: TcasGA2_TC000859] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315177] [Gene Type: protein-coding]","TcasGA2_TC000706; LOC663672 || TcasGA2_TC000859; LOC103315177"]
[121,"NC_007417.3",7586759,"SNV","T","C","Heterozygous",11,25,44,1,5,6,0.45,37.27,11,25,6,6,-1.64,0.7,0.74,"no","C/T","No",1,84.58,"XP_008201416.1:c.[290A>G]; XP_975007.2:c.[290A>G]","XP_008201416.1:p.[Lys97Arg]; XP_975007.2:p.[Lys97Arg]","LOC663884",663884,null,"663884 [Gene Symbol: LOC663884] [Locus Tag: TcasGA2_TC000688] [Chromosome: LG2] [Map Location: ] [Description: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic] [Gene Type: protein-coding]","LOC663884; TcasGA2_TC000688"]
[122,"NC_007417.3",7587045,"SNV","G","C","Heterozygous",11,20,55,1,6,8,0.43,37.73,14,25,9,9,-0.65,0.69,0.99,"no","C/G","No",1,71.64,"XP_008201416.1:c.[148C>G]; XP_975007.2:c.[148C>G]","XP_008201416.1:p.[His50Asp]; XP_975007.2:p.[His50Asp]","LOC663884",663884,null,"663884 [Gene Symbol: LOC663884] [Locus Tag: TcasGA2_TC000688] [Chromosome: LG2] [Map Location: ] [Description: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic] [Gene Type: protein-coding]","LOC663884; TcasGA2_TC000688"]
[123,"NC_007417.3","7638473..7638474","MNV","AA","CG","Heterozygous",14,21,66.67,1,3,14,0.18,37.14,17,24,12,13,-1.69,0.61,0.7,"no","complex","No",1,200,"XP_008201430.1:c.[344_345delTTinsCG]; XP_008201431.1:c.[344_345delTTinsCG]","XP_008201430.1:p.[Ile115Thr]; XP_008201431.1:p.[Ile115Thr]","LOC664053",664053,null,"664053 [Gene Symbol: LOC664053] [Locus Tag: TcasGA2_TC000677] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase SHPRH] [Gene Type: protein-coding]","LOC664053; TcasGA2_TC000677"]
[124,"NC_007417.3","7801375..7801376","MNV","TA","AG","Heterozygous",19,24,79.17,1,5,15,0.25,37.86,20,26,9,11,null,0.86,1,"no","complex","No",1,200,"XP_015839909.1:c.1354_1355delTAinsCT","XP_015839909.1:p.Tyr452Leu","LOC664192",664192,null,"664192 [Gene Symbol: LOC664192] [Locus Tag: TcasGA2_TC000665] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC664192] [Gene Type: protein-coding]","TcasGA2_TC000665; LOC664192"]
[125,"NC_007417.3",7801376,"SNV","A","G","Heterozygous",5,24,20.83,1,2,4,0.33,38.98,6,26,5,5,null,0.33,0.96,"no","complex","No",1,200,"XP_015839909.1:c.1354T>C","XP_015839909.1:p.Tyr452His","LOC664192",664192,null,"664192 [Gene Symbol: LOC664192] [Locus Tag: TcasGA2_TC000665] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC664192] [Gene Type: protein-coding]","TcasGA2_TC000665; LOC664192"]
[128,"NC_007417.3",8647247,"Deletion","C","-","Homozygous",23,23,100,1,7,17,0.29,36.57,24,24,11,11,null,1,1,"no","-/-","No",1,99.74,"XP_008201469.1:c.1481delC","XP_008201469.1:p.Arg496fs","LOC664379",664379,null,"664379 [Gene Symbol: LOC664379] [Locus Tag: TcasGA2_TC000935] [Chromosome: LG2] [Map Location: ] [Description: high-affinity choline transporter 1] [Gene Type: protein-coding]","LOC664379; TcasGA2_TC000935"]
[129,"NC_007417.3",8849554,"SNV","G","T","Heterozygous",9,20,45,1,3,8,0.27,36.56,11,24,5,5,-1.94,0.25,1,"no","G/T","No",1,68.35,"XP_008195282.1:c.501C>A","XP_008195282.1:p.Asp167Glu","LOC655255",655255,null,"655255 [Gene Symbol: LOC655255] [Locus Tag: TcasGA2_TC000631] [Chromosome: LG2] [Map Location: ] [Description: origin recognition complex subunit 2] [Gene Type: protein-coding]","TcasGA2_TC000631; LOC655255"]
[130,"NC_007417.3",8849632,"SNV","G","T","Heterozygous",11,21,52.38,1,4,7,0.36,37.36,11,23,4,7,0.35,0.17,0.99,"no","G/T","No",1,81.83,"XP_008195282.1:c.423C>A","XP_008195282.1:p.Asp141Glu","LOC655255",655255,null,"655255 [Gene Symbol: LOC655255] [Locus Tag: TcasGA2_TC000631] [Chromosome: LG2] [Map Location: ] [Description: origin recognition complex subunit 2] [Gene Type: protein-coding]","TcasGA2_TC000631; LOC655255"]
[131,"NC_007417.3",8884951,"SNV","T","C","Heterozygous",10,20,50,1,1,10,0.09,37.4,11,22,5,7,-0.11,0.26,0.36,"no","C/T","No",1,82.02,"XP_967567.1:c.496A>G","XP_967567.1:p.Thr166Ala","LOC655917",655917,null,"655917 [Gene Symbol: LOC655917] [Locus Tag: TcasGA2_TC000627] [Chromosome: LG2] [Map Location: ] [Description: cysteine and histidine-rich domain-containing protein] [Gene Type: protein-coding]","TcasGA2_TC000627; LOC655917"]
[132,"NC_007417.3",8886099,"SNV","C","T","Heterozygous",10,21,47.62,1,8,2,0.2,39.2,10,23,6,8,1.48,0.74,0.98,"no","C/T","No",1,81.46,"XP_967646.1:c.2042G>A","XP_967646.1:p.Arg681Lys","LOC655996",655996,null,"655996 [Gene Symbol: LOC655996] [Locus Tag: TcasGA2_TC000626] [Chromosome: LG2] [Map Location: ] [Description: molybdenum cofactor sulfurase 1] [Gene Type: protein-coding]","TcasGA2_TC000626; LOC655996"]
[133,"NC_007417.3",8900326,"SNV","C","T","Heterozygous",11,20,55,1,6,6,0.5,37.36,12,21,7,9,-1.44,0.84,0.99,"no","C/T","No",1,72.94,"XP_967720.2:c.[1529G>A]; XP_015840574.1:c.[1529G>A]; XP_015840573.1:c.[1529G>A]","XP_967720.2:p.[Arg510Lys]; XP_015840574.1:p.[Arg510Lys]; XP_015840573.1:p.[Arg510Lys]","LOC656076",656076,null,"656076 [Gene Symbol: LOC656076] [Locus Tag: TcasGA2_TC000625] [Chromosome: LG2] [Map Location: ] [Description: chaoptin] [Gene Type: protein-coding]","LOC656076; TcasGA2_TC000625"]
[135,"NC_007417.3",9085115,"SNV","G","C","Heterozygous",9,21,42.86,1,6,4,0.4,37.67,10,23,8,8,0,0.82,0.95,"no","C/G","No",1,68.88,"XP_969760.1:c.1439G>C","XP_969760.1:p.Gly480Ala","LOC658266",658266,null,"658266 [Gene Symbol: LOC658266] [Locus Tag: TcasGA2_TC000974] [Chromosome: LG2] [Map Location: ] [Description: protein NRDE2 homolog] [Gene Type: protein-coding]","LOC658266; TcasGA2_TC000974"]
[136,"NC_007417.3",9091068,"SNV","T","G","Heterozygous",11,21,52.38,1,6,8,0.43,38.45,14,24,7,8,0.14,0.26,0.99,"no","G/T","No",1,78.23,"XP_008201029.1:c.1075T>G","XP_008201029.1:p.Ser359Ala","LOC658408",658408,null,"658408 [Gene Symbol: LOC658408] [Locus Tag: TcasGA2_TC000975] [Chromosome: LG2] [Map Location: ] [Description: dolichol kinase] [Gene Type: protein-coding]","LOC658408; TcasGA2_TC000975"]
[137,"NC_007417.3","9099736..9099737","MNV","CC","TT","Heterozygous",10,23,43.48,1,10,2,0.17,38.85,12,25,6,8,0.53,0.57,0.95,"no","complex","No",1,200,"XP_970105.1:c.1587_1588delGGinsAA","XP_970105.1:p.Val530Ile","LOC658647",658647,null,"658647 [Gene Symbol: LOC658647] [Locus Tag: TcasGA2_TC000607] [Chromosome: LG2] [Map Location: ] [Description: MYCBP-associated protein] [Gene Type: protein-coding]","LOC658647; TcasGA2_TC000607"]
[138,"NC_007417.3","9099820..9099821","MNV","TC","CT","Homozygous",20,20,100,1,12,12,0.5,38.5,24,24,14,17,null,1,1,"no","CT/CT","No",1,200,"XP_970105.1:c.1503_1504delGAinsAG","XP_970105.1:p.Thr502Ala","LOC658647",658647,null,"658647 [Gene Symbol: LOC658647] [Locus Tag: TcasGA2_TC000607] [Chromosome: LG2] [Map Location: ] [Description: MYCBP-associated protein] [Gene Type: protein-coding]","LOC658647; TcasGA2_TC000607"]
[141,"NC_007417.3","9111303..9111308","Deletion","TGCTGT","-","Heterozygous",9,23,39.13,1,0,9,0,37.78,9,24,5,4,1.3,0.12,0.34,"no","complex","No",1,200,"XP_015840569.1:c.[7806_7811delACAGCA]; XP_015840568.1:c.[7857_7862delACAGCA]; XP_015840570.1:c.[7794_7799delACAGCA]; XP_015840565.1:c.[7956_7961delACAGCA]; XP_015840564.1:c.[7968_7973delACAGCA]; XP_015840566.1:c.[7956_7961delACAGCA]; XP_015840567.1:c.[7917_7922delACAGCA]","XP_015840569.1:p.[Gln2609_Gln2610del]; XP_015840568.1:p.[Gln2626_Gln2627del]; XP_015840570.1:p.[Gln2605_Gln2606del]; XP_015840565.1:p.[Gln2659_Gln2660del]; XP_015840564.1:p.[Gln2663_Gln2664del]; XP_015840566.1:p.[Gln2659_Gln2660del]; XP_015840567.1:p.[Gln2646_Gln2647del]","LOC658776",658776,null,"658776 [Gene Symbol: LOC658776] [Locus Tag: TcasGA2_TC000606] [Chromosome: LG2] [Map Location: ] [Description: histone-lysine N-methyltransferase 2C] [Gene Type: protein-coding]","LOC658776; TcasGA2_TC000606"]
[146,"NC_007417.3",9359927,"SNV","T","A","Homozygous",22,22,100,1,16,9,0.36,36.91,25,25,11,15,null,1,1,"no","A/A","No",1,87.71,"XP_971895.2:c.76T>A","XP_971895.2:p.Tyr26Asn","LOC660584",660584,null,"660584 [Gene Symbol: LOC660584] [Locus Tag: TcasGA2_TC000987] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC660584] [Gene Type: protein-coding]","TcasGA2_TC000987; LOC660584"]
[148,"NC_007417.3",9474417,"SNV","T","G","Heterozygous",9,21,42.86,1,2,7,0.22,38.56,9,23,4,8,1.85,0.42,0.44,"no","G/T","No",1,69.6,"XP_972413.1:c.[190T>G]; XP_008201071.1:c.[124T>G]","XP_972413.1:p.[Ser64Ala]; XP_008201071.1:p.[Ser42Ala]","LOC661139",661139,null,"661139 [Gene Symbol: LOC661139] [Locus Tag: TcasGA2_TC000992] [Chromosome: LG2] [Map Location: ] [Description: succinate dehydrogenase cytochrome b560 subunit, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC000992; LOC661139"]
[149,"NC_007417.3",9489854,"SNV","G","A","Homozygous",22,22,100,1,8,16,0.33,36.41,24,24,11,15,null,1,1,"no","A/A","No",1,87.71,"XP_015840791.1:c.[839G>A]; XP_015840790.1:c.[800G>A]; XP_008201075.1:c.[839G>A]; XP_015840788.1:c.[800G>A]; XP_015840792.1:c.[800G>A]; XP_015840789.1:c.[800G>A]; XP_008201074.1:c.[839G>A]; XP_008201076.1:c.[839G>A]; XP_015840793.1:c.[800G>A]","XP_015840791.1:p.[Gly280Asp]; XP_015840790.1:p.[Gly267Asp]; XP_008201075.1:p.[Gly280Asp]; XP_015840788.1:p.[Gly267Asp]; XP_015840792.1:p.[Gly267Asp]; XP_015840789.1:p.[Gly267Asp]; XP_008201074.1:p.[Gly280Asp]; XP_008201076.1:p.[Gly280Asp]; XP_015840793.1:p.[Gly267Asp]","LOC100141942",100141942,null,"100141942 [Gene Symbol: LOC100141942] [Locus Tag: TcasGA2_TC000995] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC100141942] [Gene Type: protein-coding]","TcasGA2_TC000995; LOC100141942"]
[150,"NC_007417.3",9619261,"SNV","C","T","Homozygous",26,26,100,1,6,21,0.22,39.31,27,27,12,14,null,1,1,"no","T/T","No",1,99.74,"XP_008201097.1:c.2579C>T","XP_008201097.1:p.Thr860Ile","LOC661669",661669,null,"661669 [Gene Symbol: LOC661669] [Locus Tag: TcasGA2_TC001001] [Chromosome: LG2] [Map Location: ] [Description: microtubule-associated protein futsch] [Gene Type: protein-coding]","LOC661669; TcasGA2_TC001001"]
[151,"NC_007417.3","9631309..9631310","MNV","CT","GC","Homozygous",25,25,100,1,14,12,0.46,38.08,26,26,11,22,null,1,1,"no","GC/GC","No",1,200,"XP_015840516.1:c.[123_124delAGinsGC]; XP_008201098.1:c.[123_124delAGinsGC]; XP_008201103.1:c.[72_73delAGinsGC]; XP_015840517.1:c.[123_124delAGinsGC]; XP_008201099.1:c.[72_73delAGinsGC]","XP_015840516.1:p.[Ala42Pro]; XP_008201098.1:p.[Ala42Pro]; XP_008201103.1:p.[Ala25Pro]; XP_015840517.1:p.[Ala42Pro]; XP_008201099.1:p.[Ala25Pro]","LOC661710",661710,null,"661710 [Gene Symbol: LOC661710] [Locus Tag: TcasGA2_TC000571] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized family 31 glucosidase KIAA1161] [Gene Type: protein-coding]","LOC661710; TcasGA2_TC000571"]
[153,"NC_007417.3",9925987,"SNV","T","C","Homozygous",26,26,100,1,19,12,0.39,37.96,31,31,17,17,null,1,1,"no","C/C","No",1,98.17,"XP_015839940.1:c.1409A>G","XP_015839940.1:p.Asn470Ser","LOC661704",661704,null,"661704 [Gene Symbol: LOC661704] [Locus Tag: TcasGA2_TC000547] [Chromosome: LG2] [Map Location: ] [Description: transmembrane protease serine 9] [Gene Type: protein-coding]","P13; LOC661704; TcasGA2_TC000547; H14"]
[155,"NC_007417.3","9928747^9928748","Insertion","-","AA","Heterozygous",17,23,73.91,1,8,10,0.44,37.71,18,25,10,11,0.6,0.99,1,"no","complex","No",1,200,"XP_015839940.1:c.12_13insTT","XP_015839940.1:p.Thr5fs","LOC661704",661704,null,"661704 [Gene Symbol: LOC661704] [Locus Tag: TcasGA2_TC000547] [Chromosome: LG2] [Map Location: ] [Description: transmembrane protease serine 9] [Gene Type: protein-coding]","P13; LOC661704; TcasGA2_TC000547; H14"]
[157,"NC_007417.3",9944940,"SNV","T","A","Heterozygous",15,23,65.22,1,5,12,0.29,39.73,17,30,10,11,1.74,0.52,0.91,"no","A/T","No",1,50.7,"XP_015840576.1:c.[2744T>A]; XP_015840577.1:c.[2744T>A]; XP_015840575.1:c.[2744T>A]","XP_015840576.1:p.[Phe915Tyr]; XP_015840577.1:p.[Phe915Tyr]; XP_015840575.1:p.[Phe915Tyr]","LOC100141648",100141648,null,"100141648 [Gene Symbol: LOC100141648] [Locus Tag: ] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: uncharacterized LOC100141648] [Gene Type: protein-coding]","LOC100141648"]
[160,"NC_007417.3",9976564,"SNV","G","A","Heterozygous",15,30,50,1,8,7,0.47,38.33,15,32,3,7,0.1,0.31,0.77,"no","A/G","No",1,117.79,"XP_015840585.1:c.[225-140G>A]; XP_008201019.1:c.[250G>A]","XP_008201019.1:p.Gly84Ser","LOC103315066",103315066,null,"103315066 [Gene Symbol: LOC103315066] [Locus Tag: TcasGA2_TC001028] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315066] [Gene Type: protein-coding]","LOC103315066; TcasGA2_TC001028"]
[162,"NC_007417.3",9984883,"SNV","G","A","Heterozygous",13,21,61.9,1,3,10,0.23,38.38,13,23,6,7,-0.83,0.47,0.63,"no","A/G","No",1,57.27,"XP_001814929.1:c.136G>A","XP_001814929.1:p.Asp46Asn","LOC100142616",100142616,null,"100142616 [Gene Symbol: LOC100142616] [Locus Tag: TcasGA2_TC001031] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC100142616] [Gene Type: protein-coding]","TcasGA2_TC001031; LOC100142616"]
[166,"NC_007417.3","10180194..10180195","MNV","CA","TG","Heterozygous",11,20,55,1,10,1,0.09,39.91,11,23,6,7,3.5,0.22,0.3,"no","complex","No",1,200,"XP_008201022.1:c.[4328_4329delCAinsTG]; XP_015840738.1:c.[4262_4263delCAinsTG]; XP_015840740.1:c.[4328_4329delCAinsTG]; XP_015840739.1:c.[4328_4329delCAinsTG]","XP_008201022.1:p.[Pro1443Leu]; XP_015840738.1:p.[Pro1421Leu]; XP_015840740.1:p.[Pro1443Leu]; XP_015840739.1:p.[Pro1443Leu]","LOC663795",663795,null,"663795 [Gene Symbol: LOC663795] [Locus Tag: TcasGA2_TC001044] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC663795] [Gene Type: protein-coding]","TcasGA2_TC001044; LOC663795"]
[167,"NC_007417.3",10475118,"SNV","G","A","Homozygous",21,21,100,1,14,8,0.36,35.29,22,22,12,15,null,1,1,"no","A/A","No",1,84.7,"XP_015840701.1:c.[3365G>A]; XP_015840700.1:c.[3365G>A]","XP_015840701.1:p.[Arg1122His]; XP_015840700.1:p.[Arg1122His]","LOC664116",664116,null,"664116 [Gene Symbol: LOC664116] [Locus Tag: TcasGA2_TC001065] [Chromosome: LG2] [Map Location: ] [Description: Nance-Horan syndrome protein] [Gene Type: protein-coding]","LOC664116; TcasGA2_TC001065"]
[168,"NC_007417.3","10497371..10497373","Deletion","GAC","-","Homozygous",20,20,100,1,8,15,0.35,35.8,23,23,12,13,null,1,1,"no","-/-","No",1,200,"XP_008201026.1:c.354_356delGAC","XP_008201026.1:p.Thr120del","LOC664148",664148,null,"664148 [Gene Symbol: LOC664148] [Locus Tag: TcasGA2_TC001069] [Chromosome: LG2] [Map Location: ] [Description: dissatisfaction] [Gene Type: protein-coding]","dsf; TcasGA2_TC001069; NR2E4; LOC664148"]
[169,"NC_007417.3","10503914..10503916","Deletion","GAA","-","Homozygous",26,26,100,1,21,6,0.22,38.15,27,27,14,23,null,1,1,"no","-/-","No",1,200,"XP_975277.1:c.1415_1417delTTC","XP_975277.1:p.Leu472del","LOC664171",664171,null,"664171 [Gene Symbol: LOC664171] [Locus Tag: TcasGA2_TC000506] [Chromosome: LG2] [Map Location: ] [Description: chromatin assembly factor 1 subunit B] [Gene Type: protein-coding]","TcasGA2_TC000506; LOC664171"]
[170,"NC_007417.3",10506316,"SNV","T","A","Homozygous",20,20,100,1,11,14,0.44,39.15,25,25,12,13,null,1,1,"no","A/A","No",1,81.69,"XP_008201205.1:c.241T>A","XP_008201205.1:p.Cys81Ser","LOC664178",664178,null,"664178 [Gene Symbol: LOC664178] [Locus Tag: TcasGA2_TC001072] [Chromosome: LG2] [Map Location: ] [Description: anaphase-promoting complex subunit 1] [Gene Type: protein-coding]","LOC664178; shtd; shattered; TcasGA2_TC001072"]
[171,"NC_007417.3",10506329,"SNV","G","A","Homozygous",22,22,100,1,13,14,0.48,38.27,27,27,12,13,null,1,1,"no","A/A","No",1,87.71,"XP_008201205.1:c.254G>A","XP_008201205.1:p.Ser85Asn","LOC664178",664178,null,"664178 [Gene Symbol: LOC664178] [Locus Tag: TcasGA2_TC001072] [Chromosome: LG2] [Map Location: ] [Description: anaphase-promoting complex subunit 1] [Gene Type: protein-coding]","LOC664178; shtd; shattered; TcasGA2_TC001072"]
[172,"NC_007417.3",10514647,"SNV","G","A","Homozygous",23,23,100,1,10,15,0.4,39.09,25,25,15,14,null,1,1,"no","A/A","No",1,90.71,"XP_008201207.1:c.[223+24C>T]; XP_975293.1:c.[223+24C>T]; XP_015840560.1:c.[247C>T]; XP_015840559.1:c.[247C>T]; XP_015840558.1:c.[247C>T]","XP_015840560.1:p.[Pro83Ser]; XP_015840559.1:p.[Pro83Ser]; XP_015840558.1:p.[Pro83Ser]","LOC664187",664187,null,"664187 [Gene Symbol: LOC664187] [Locus Tag: TcasGA2_TC000505] [Chromosome: LG2] [Map Location: ] [Description: importin subunit alpha-5] [Gene Type: protein-coding]","TcasGA2_TC000505; LOC664187"]
[173,"NC_007417.3",10834985,"SNV","A","C","Homozygous",22,22,100,1,16,8,0.33,36.5,24,24,13,17,null,1,1,"no","C/C","No",1,86.13,"XP_008201508.1:c.[1003A>C]; XP_015840836.1:c.[1003A>C]","XP_008201508.1:p.[Ile335Leu]; XP_015840836.1:p.[Ile335Leu]","LOC655505",655505,null,"655505 [Gene Symbol: LOC655505] [Locus Tag: TcasGA2_TC001093] [Chromosome: LG2] [Map Location: ] [Description: poly(ADP-ribose) glycohydrolase ARH3] [Gene Type: protein-coding]","LOC655505; TcasGA2_TC001093"]
[174,"NC_007417.3",10924281,"SNV","A","G","Homozygous",20,20,100,1,6,15,0.29,37.5,21,21,12,15,null,1,1,"no","G/G","No",1,80.09,"XP_008201513.1:c.128T>C","XP_008201513.1:p.Val43Ala","LOC656916",656916,null,"656916 [Gene Symbol: LOC656916] [Locus Tag: TcasGA2_TC000466] [Chromosome: LG2] [Map Location: ] [Description: oxygen-dependent coproporphyrinogen-III oxidase] [Gene Type: protein-coding]","LOC656916; TcasGA2_TC000466"]
[175,"NC_007417.3",11061390,"SNV","C","A","Homozygous",26,26,100,1,11,15,0.42,38.27,26,26,15,20,null,1,1,"no","A/A","No",1,99.74,"NP_001107840.1:c.[4148C>A]; XP_008201496.1:c.[4148C>A]; XP_015839513.1:c.[4148C>A]","NP_001107840.1:p.[Thr1383Asn]; XP_008201496.1:p.[Thr1383Asn]; XP_015839513.1:p.[Thr1383Asn]","Dcr-2",658023,"Dicer-2","658023 [Gene Symbol: Dcr-2] [Locus Tag: TcasGA2_TC001108] [Chromosome: LG2] [Map Location: ] [Description: Dicer-2] [Gene Type: protein-coding]","TcasGA2_TC001108; Dcr-2"]
[177,"NC_007417.3","11911557..11911558","MNV","CA","GG","Homozygous",25,25,100,1,14,16,0.47,38.33,30,30,15,18,null,1,1,"no","GG/GG","No",1,200,"XP_001814259.1:c.840_841delTGinsCC","XP_001814259.1:p.Glu281Gln","LOC100141689",100141689,null,"100141689 [Gene Symbol: LOC100141689] [Locus Tag: TcasGA2_TC000402] [Chromosome: LG2] [Map Location: ] [Description: ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1] [Gene Type: protein-coding]","LOC100141689; TcasGA2_TC000402"]
[178,"NC_007417.3",11924968,"SNV","T","A","Heterozygous",10,21,47.62,1,2,9,0.18,39.4,11,23,4,7,2.08,0.31,0.75,"no","A/T","No",1,81.42,"XP_015840541.1:c.[6076A>T]; XP_015840548.1:c.[5971A>T]; XP_015840547.1:c.[6076A>T]; XP_015840544.1:c.[6076A>T]; XP_015840545.1:c.[5971A>T]; XP_015840543.1:c.[6076A>T]; XP_015840549.1:c.[6076A>T]; XP_015840546.1:c.[6076A>T]; XP_015840542.1:c.[6076A>T]","XP_015840541.1:p.[Met2026Leu]; XP_015840548.1:p.[Met1991Leu]; XP_015840547.1:p.[Met2026Leu]; XP_015840544.1:p.[Met2026Leu]; XP_015840545.1:p.[Met1991Leu]; XP_015840543.1:p.[Met2026Leu]; XP_015840549.1:p.[Met2026Leu]; XP_015840546.1:p.[Met2026Leu]; XP_015840542.1:p.[Met2026Leu]","LOC662569",662569,null,"662569 [Gene Symbol: LOC662569] [Locus Tag: TcasGA2_TC000401] [Chromosome: LG2] [Map Location: ] [Description: fat-like cadherin-related tumor suppressor homolog] [Gene Type: protein-coding]","LOC662569; FAT; cadherin; TcasGA2_TC000401"]
[179,"NC_007417.3",12009723,"SNV","C","G","Homozygous",23,23,100,1,12,11,0.48,38.35,23,23,13,14,null,1,1,"no","G/G","No",1,89.12,"XP_008201654.1:c.489G>C","XP_008201654.1:p.Glu163Asp","LOC103315244",103315244,null,"103315244 [Gene Symbol: LOC103315244] [Locus Tag: TcasGA2_TC000398] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315244] [Gene Type: protein-coding]","LOC103315244; TcasGA2_TC000398"]
[180,"NC_007417.3",12111081,"SNV","C","T","Homozygous",21,21,100,1,13,10,0.43,37.57,23,23,12,15,null,1,1,"no","T/T","No",1,84.71,"XP_008201607.1:c.203G>A","XP_008201607.1:p.Arg68Lys","LOC662815",662815,null,"662815 [Gene Symbol: LOC662815] [Locus Tag: TcasGA2_TC000395] [Chromosome: LG2] [Map Location: ] [Description: beta-1,4-glucuronyltransferase 1] [Gene Type: protein-coding]","TcasGA2_TC000395; LOC662815"]
[181,"NC_007417.3",12245740,"SNV","T","C","Homozygous",34,34,100,1,21,21,0.5,37.44,42,42,22,27,null,1,1,"no","C/C","No",1,122.24,"XP_001814707.1:c.274A>G","XP_001814707.1:p.Thr92Ala","LOC100142510",100142510,null,"100142510 [Gene Symbol: LOC100142510] [Locus Tag: TcasGA2_TC000380] [Chromosome: LG2] [Map Location: ] [Description: SET and MYND domain-containing protein 5] [Gene Type: protein-coding]","LOC100142510; TcasGA2_TC000380"]
[182,"NC_007417.3",12245812,"SNV","T","C","Homozygous",22,22,100,1,10,13,0.43,35.91,23,23,12,16,null,1,1,"no","C/C","No",1,86.13,"XP_001814707.1:c.202A>G","XP_001814707.1:p.Thr68Ala","LOC100142510",100142510,null,"100142510 [Gene Symbol: LOC100142510] [Locus Tag: TcasGA2_TC000380] [Chromosome: LG2] [Map Location: ] [Description: SET and MYND domain-containing protein 5] [Gene Type: protein-coding]","LOC100142510; TcasGA2_TC000380"]
[183,"NC_007417.3",12247523,"Deletion","T","-","Homozygous",20,20,100,1,12,9,0.43,37.85,21,21,14,15,null,1,1,"no","-/-","No",1,90.71,"XP_001814757.1:c.1delA","XP_001814757.1:p.Met1?","LOC100142108",100142108,null,"100142108 [Gene Symbol: LOC100142108] [Locus Tag: TcasGA2_TC000379] [Chromosome: LG2] [Map Location: ] [Description: transmembrane emp24 domain-containing protein eca] [Gene Type: protein-coding]","TcasGA2_TC000379; LOC100142108"]
[184,"NC_007417.3",12251363,"SNV","T","C","Homozygous",24,24,100,1,15,12,0.44,38.29,27,27,16,16,null,1,1,"no","C/C","No",1,92.15,"XP_008201627.1:c.604A>G","XP_008201627.1:p.Thr202Ala","LOC663431",663431,null,"663431 [Gene Symbol: LOC663431] [Locus Tag: TcasGA2_TC000376] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase RFWD2] [Gene Type: protein-coding]","LOC663431; TcasGA2_TC000376"]
[185,"NC_007417.3",12257751,"SNV","A","G","Homozygous",22,22,100,1,12,12,0.5,37.86,24,24,12,14,null,1,1,"no","G/G","No",1,86.11,"XP_974637.1:c.1307T>C","XP_974637.1:p.Val436Ala","LOC663504",663504,null,"663504 [Gene Symbol: LOC663504] [Locus Tag: TcasGA2_TC000375] [Chromosome: LG2] [Map Location: ] [Description: pre-mRNA-splicing factor Slu7] [Gene Type: protein-coding]","LOC663504; TcasGA2_TC000375"]
[186,"NC_007417.3",12281481,"SNV","C","A","Homozygous",21,21,100,1,17,4,0.19,36.67,21,21,12,13,null,1,1,"no","A/A","No",1,84.7,"XP_015840877.1:c.[2107G>T]; XP_015840881.1:c.[1321G>T]; XP_015840878.1:c.[2107G>T]; XP_015840880.1:c.[2107G>T]; XP_015840879.1:c.[2107G>T]","XP_015840877.1:p.[Ala703Ser]; XP_015840881.1:p.[Ala441Ser]; XP_015840878.1:p.[Ala703Ser]; XP_015840880.1:p.[Ala703Ser]; XP_015840879.1:p.[Ala703Ser]","LOC103315239",103315239,null,"103315239 [Gene Symbol: LOC103315239] [Locus Tag: TcasGA2_TC000368] [Chromosome: LG2] [Map Location: ] [Description: prominin-1-A] [Gene Type: protein-coding]","TcasGA2_TC000368; LOC103315239"]
[187,"NC_007417.3",12386498,"SNV","T","C","Homozygous",21,21,100,1,13,8,0.38,38.24,21,21,7,17,null,1,1,"no","C/C","No",1,83.13,"NP_001280519.1:c.[958T>C]; XP_015839687.1:c.[958T>C]","NP_001280519.1:p.[Ser320Pro]; XP_015839687.1:p.[Ser320Pro]","LOC663905",663905,"inhibitor of apoptosis 2","663905 [Gene Symbol: LOC663905] [Locus Tag: TcasGA2_TC001189] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 2] [Gene Type: protein-coding]","Tiap2; LOC663905; TcasGA2_TC001189"]
[188,"NC_007417.3",12393906,"SNV","G","T","Homozygous",22,22,100,1,7,22,0.24,38.64,29,29,10,12,null,1,1,"no","T/T","No",1,87.71,"XP_008201644.1:c.[768G>T]; XP_008201646.1:c.[747G>T]; XP_008201645.1:c.[747G>T]; XP_975061.1:c.[747G>T]","XP_008201644.1:p.[Gln256His]; XP_008201646.1:p.[Gln249His]; XP_008201645.1:p.[Gln249His]; XP_975061.1:p.[Gln249His]","LOC663941",663941,null,"663941 [Gene Symbol: LOC663941] [Locus Tag: TcasGA2_TC001192] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 1] [Gene Type: protein-coding]","TcasGA2_TC001192; LOC663941; Tiap1"]
[189,"NC_007417.3",12393908,"SNV","G","A","Homozygous",22,22,100,1,7,22,0.24,39.23,29,29,10,12,null,1,1,"no","A/A","No",1,87.71,"XP_008201646.1:c.[749G>A]; XP_008201645.1:c.[749G>A]; XP_975061.1:c.[749G>A]; XP_008201644.1:c.[770G>A]","XP_008201646.1:p.[Gly250Asp]; XP_008201645.1:p.[Gly250Asp]; XP_975061.1:p.[Gly250Asp]; XP_008201644.1:p.[Gly257Asp]","LOC663941",663941,null,"663941 [Gene Symbol: LOC663941] [Locus Tag: TcasGA2_TC001192] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 1] [Gene Type: protein-coding]","TcasGA2_TC001192; LOC663941; Tiap1"]
[190,"NC_007417.3",12572180,"SNV","G","T","Homozygous",24,24,100,1,11,18,0.38,37.79,29,29,14,15,null,1,1,"no","T/T","No",1,93.73,"XP_008201481.1:c.1031G>T","XP_008201481.1:p.Ser344Ile","LOC655180",655180,null,"655180 [Gene Symbol: LOC655180] [Locus Tag: TcasGA2_TC001200] [Chromosome: LG2] [Map Location: ] [Description: TELO2-interacting protein 1 homolog] [Gene Type: protein-coding]","LOC655180; TcasGA2_TC001200"]
[191,"NC_007417.3",12572188,"SNV","G","A","Homozygous",24,24,100,1,11,18,0.38,37.67,29,29,14,15,null,1,1,"no","A/A","No",1,93.72,"XP_008201481.1:c.1039G>A","XP_008201481.1:p.Val347Ile","LOC655180",655180,null,"655180 [Gene Symbol: LOC655180] [Locus Tag: TcasGA2_TC001200] [Chromosome: LG2] [Map Location: ] [Description: TELO2-interacting protein 1 homolog] [Gene Type: protein-coding]","LOC655180; TcasGA2_TC001200"]
[192,"NC_007417.3",12965386,"SNV","A","G","Heterozygous",10,22,45.45,1,8,6,0.43,35.9,14,26,4,6,-1.91,0.96,1,"no","A/G","No",1,80,"XP_968807.1:c.847A>G","XP_968807.1:p.Thr283Ala","LOC657245",657245,null,"657245 [Gene Symbol: LOC657245] [Locus Tag: TcasGA2_TC001222] [Chromosome: LG2] [Map Location: ] [Description: corticotropin-releasing factor receptor 2] [Gene Type: protein-coding]","TcasGA2_TC001222; LOC657245"]
[195,"NC_007417.3",12986531,"SNV","C","A","Heterozygous",9,22,40.91,1,4,6,0.4,38.89,10,26,5,7,1.64,0.99,0.89,"no","A/C","No",1,62.57,"XP_969244.1:c.145G>T","XP_969244.1:p.Ala49Ser","LOC657708",657708,null,"657708 [Gene Symbol: LOC657708] [Locus Tag: TcasGA2_TC000332] [Chromosome: LG2] [Map Location: ] [Description: potassium channel subfamily K member 6] [Gene Type: protein-coding]","LOC657708; TcasGA2_TC000332"]
[196,"NC_007417.3",13112207,"SNV","A","G","Homozygous",21,21,100,1,10,17,0.37,36.71,27,27,11,15,null,1,1,"no","G/G","No",1,83.1,"XP_015840704.1:c.3395A>G","XP_015840704.1:p.Glu1132Gly","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[197,"NC_007417.3",13112815,"SNV","G","A","Homozygous",22,22,100,1,13,12,0.48,37.86,25,25,10,16,null,1,1,"no","A/A","No",1,87.71,"XP_015840704.1:c.4003G>A","XP_015840704.1:p.Asp1335Asn","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[198,"NC_007417.3",13114480,"SNV","T","C","Homozygous",29,29,100,1,17,15,0.47,37.38,32,32,14,18,null,1,1,"no","C/C","No",1,107.2,"XP_015840704.1:c.5623T>C","XP_015840704.1:p.*1875Arg","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[199,"NC_007417.3",13114483,"SNV","G","A","Homozygous",26,26,100,1,16,13,0.45,38.31,29,29,13,18,null,1,1,"no","A/A","No",1,99.74,"XP_015840704.1:c.5626G>A","XP_015840704.1:p.Val1876Ile","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[200,"NC_007417.3",13117444,"SNV","A","C","Homozygous",28,28,100,1,8,20,0.29,37.46,28,28,18,16,null,1,1,"no","C/C","No",1,104.19,"XP_015840704.1:c.6850A>C","XP_015840704.1:p.Lys2284Gln","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[201,"NC_007417.3",13117724,"SNV","T","G","Homozygous",21,21,100,1,5,16,0.24,38.05,21,21,12,14,null,1,1,"no","G/G","No",1,83.1,"XP_015840704.1:c.6979T>G","XP_015840704.1:p.Phe2327Val","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[202,"NC_007417.3",13120070,"SNV","C","G","Homozygous",23,23,100,1,14,9,0.39,36.87,23,23,9,16,null,1,1,"no","G/G","No",1,89.12,"XP_015840551.1:c.[1149C>G]; XP_015840552.1:c.[1149C>G]","XP_015840551.1:p.[Ile383Met]; XP_015840552.1:p.[Ile383Met]","LOC659632",659632,null,"659632 [Gene Symbol: LOC659632] [Locus Tag: TcasGA2_TC001240] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase UHRF1] [Gene Type: protein-coding]","TcasGA2_TC001240; LOC659632"]
[203,"NC_007417.3",13199339,"SNV","A","G","Heterozygous",8,21,38.1,1,2,6,0.25,38,8,25,3,3,-0.11,0.2,0.98,"no","A/G","No",1,57.29,"XP_015840017.1:c.1387A>G","XP_015840017.1:p.Ser463Gly","LOC103312164",103312164,null,"103312164 [Gene Symbol: LOC103312164] [Locus Tag: TcasGA2_TC001246] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103312164] [Gene Type: protein-coding]","LOC103312164; TcasGA2_TC001246"]
[204,"NC_007417.3",13207587,"SNV","T","C","Heterozygous",9,23,39.13,1,8,2,0.2,36.22,10,24,4,8,-2.2,0.22,0.29,"no","C/T","No",1,64.55,"XP_008190269.1:c.1391A>G","XP_008190269.1:p.Asn464Ser","LOC660466",660466,null,"660466 [Gene Symbol: LOC660466] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: dnaJ homolog subfamily C member 10-like] [Gene Type: protein-coding]","LOC660466"]
[205,"NC_007417.3",13262971,"SNV","G","C","Homozygous",21,21,100,1,6,17,0.26,38.81,23,23,11,13,null,1,1,"no","C/C","No",1,83.12,"XP_008190278.1:c.[3113C>G]; XP_008190279.1:c.[3110C>G]","XP_008190278.1:p.[Ala1038Gly]; XP_008190279.1:p.[Ala1037Gly]","LOC100141743",100141743,null,"100141743 [Gene Symbol: LOC100141743] [Locus Tag: TcasGA2_TC000301] [Chromosome: LG2] [Map Location: ] [Description: DNA topoisomerase 2-binding protein 1] [Gene Type: protein-coding]","TcasGA2_TC000301; LOC100141743"]
[206,"NC_007417.3",13266510,"SNV","C","T","Homozygous",24,24,100,1,8,19,0.3,39.04,27,27,15,17,null,1,1,"no","T/T","No",1,93.73,"XP_008190278.1:c.[805G>A]; XP_008190279.1:c.[802G>A]","XP_008190278.1:p.[Asp269Asn]; XP_008190279.1:p.[Asp268Asn]","LOC100141743",100141743,null,"100141743 [Gene Symbol: LOC100141743] [Locus Tag: TcasGA2_TC000301] [Chromosome: LG2] [Map Location: ] [Description: DNA topoisomerase 2-binding protein 1] [Gene Type: protein-coding]","TcasGA2_TC000301; LOC100141743"]
[207,"NC_007417.3",13338843,"SNV","C","G","Homozygous",20,20,100,1,13,12,0.48,37.9,25,25,11,16,null,1,1,"no","G/G","No",1,80.09,"XP_973098.1:c.295C>G","XP_973098.1:p.Pro99Ala","LOC661873",661873,null,"661873 [Gene Symbol: LOC661873] [Locus Tag: TcasGA2_TC001263] [Chromosome: LG2] [Map Location: ] [Description: glycerophosphodiester phosphodiesterase 1] [Gene Type: protein-coding]","LOC661873; TcasGA2_TC001263"]
[208,"NC_007417.3",13390168,"SNV","G","C","Homozygous",25,25,100,1,17,11,0.39,38.44,28,28,14,18,null,1,1,"no","C/C","No",1,95.16,"XP_008190285.1:c.[566C>G]; XP_015840711.1:c.[253+17565C>G]; XP_015840713.1:c.[196+17565C>G]; XP_008190286.1:c.[211+17565C>G]","XP_008190285.1:p.Thr189Ser","LOC661960, LOC103312156","661960 , 103312156",null,"661960 [Gene Symbol: LOC661960] [Locus Tag: TcasGA2_TC000286] [Chromosome: LG2] [Map Location: ] [Description: Kv channel-interacting protein 1] [Gene Type: protein-coding] || 103312156 [Gene Symbol: LOC103312156] [Locus Tag: TcasGA2_TC000292] [Chromosome: LG2] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC661960; TcasGA2_TC000286 || TcasGA2_TC000292; LOC103312156"]
[210,"NC_007417.3",14029885,"SNV","T","G","Heterozygous",8,20,40,1,3,5,0.38,36.25,8,24,4,7,-1.35,0.8,0.98,"no","G/T","No",1,59.58,"XP_967490.1:c.[730T>G]; XP_015840996.1:c.[829T>G]; XP_015840994.1:c.[844T>G]; XP_008190334.1:c.[841T>G]; XP_015840995.1:c.[841T>G]; XP_008190335.1:c.[730T>G]","XP_967490.1:p.[Ser244Ala]; XP_015840996.1:p.[Ser277Ala]; XP_015840994.1:p.[Ser282Ala]; XP_008190334.1:p.[Ser281Ala]; XP_015840995.1:p.[Ser281Ala]; XP_008190335.1:p.[Ser244Ala]","LOC655834",655834,null,"655834 [Gene Symbol: LOC655834] [Locus Tag: TcasGA2_TC001293] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC655834] [Gene Type: protein-coding]","TcasGA2_TC001293; LOC655834"]
[211,"NC_007417.3",14195873,"SNV","C","T","Homozygous",20,20,100,1,18,5,0.22,36.45,23,23,12,15,null,1,1,"no","T/T","No",1,81.71,"XP_968658.1:c.172G>A","XP_968658.1:p.Gly58Arg","LOC657085",657085,null,"657085 [Gene Symbol: LOC657085] [Locus Tag: TcasGA2_TC000247] [Chromosome: LG2] [Map Location: ] [Description: serine protease H2] [Gene Type: protein-coding]","TcasGA2_TC000247; LOC657085; H2"]
[212,"NC_007417.3",14309935,"SNV","A","G","Homozygous",23,23,100,1,9,17,0.35,37.43,26,26,12,12,null,1,1,"no","G/G","No",1,89.12,"XP_008190356.1:c.2125T>C","XP_008190356.1:p.Ser709Pro","LOC658024",658024,null,"658024 [Gene Symbol: LOC658024] [Locus Tag: TcasGA2_TC000238] [Chromosome: LG2] [Map Location: ] [Description: fatty acid synthase] [Gene Type: protein-coding]","LOC658024; TcasGA2_TC000238"]
[213,"NC_007417.3",14777529,"SNV","G","C","Homozygous",22,22,100,1,8,16,0.33,38.27,24,24,10,17,null,1,1,"no","C/C","No",1,86.13,"XP_972703.3:c.550C>G","XP_972703.3:p.Gln184Glu","LOC661455",661455,null,"661455 [Gene Symbol: LOC661455] [Locus Tag: TcasGA2_TC000203] [Chromosome: LG2] [Map Location: ] [Description: venom acid phosphatase Acph-1] [Gene Type: protein-coding]","TcasGA2_TC000203; LOC661455"]
[215,"NC_007418.3",718868,"SNV","A","G","Heterozygous",11,21,52.38,1,4,7,0.36,38.55,11,21,5,8,2.68,0.4,0.83,"no","A/G","No",1,81.68,"XP_974169.1:c.178A>G","XP_974169.1:p.Ile60Val","LOC663144, LOC663011","663144 , 663011",null,"663144 [Gene Symbol: LOC663144] [Locus Tag: TcasGA2_TC003170] [Chromosome: LG3] [Map Location: ] [Description: absent MD neurons and olfactory sensilla] [Gene Type: protein-coding] || 663011 [Gene Symbol: LOC663011] [Locus Tag: TcasGA2_TC003282] [Chromosome: LG3] [Map Location: ] [Description: tyramine beta hydroxylase] [Gene Type: protein-coding]","Amos; Tath1; TcasGA2_TC003170; LOC663144 || TcTBH; LOC663011; TcasGA2_TC003282"]
[216,"NC_007418.3",1005401,"SNV","A","G","Heterozygous",16,36,44.44,1,8,8,0.5,36.19,16,36,9,14,-0.1,0.47,0.46,"no","A/G","No",1,117.41,"XP_008190598.1:c.517A>G","XP_008190598.1:p.Met173Val","LOC663465",663465,null,"663465 [Gene Symbol: LOC663465] [Locus Tag: TcasGA2_TC003303] [Chromosome: LG3] [Map Location: ] [Description: cytochrome c oxidase subunit 6B2] [Gene Type: protein-coding]","LOC663465; TcasGA2_TC003303"]
[217,"NC_007418.3",1239552,"SNV","T","A","Homozygous",24,24,100,1,16,11,0.41,37.54,27,27,13,19,null,1,1,"no","A/A","No",1,93.72,"XP_975769.1:c.721T>A","XP_975769.1:p.Ser241Thr","LOC656817",656817,null,"656817 [Gene Symbol: LOC656817] [Locus Tag: TcasGA2_TC003323] [Chromosome: LG3] [Map Location: ] [Description: cytochrome b-c1 complex subunit 2, mitochondrial] [Gene Type: protein-coding]","LOC656817; TcasGA2_TC003323"]
[219,"NC_007418.3",1364665,"SNV","A","G","Homozygous",24,24,100,1,19,11,0.37,38.79,30,30,14,18,null,1,1,"no","G/G","No",1,92.13,"XP_008190660.1:c.404T>C","XP_008190660.1:p.Leu135Pro","LOC658025",658025,null,"658025 [Gene Symbol: LOC658025] [Locus Tag: TcasGA2_TC003128] [Chromosome: LG3] [Map Location: ] [Description: serine/threonine-protein kinase SMG1] [Gene Type: protein-coding]","LOC658025; TcasGA2_TC003128"]
[221,"NC_007418.3",2016979,"SNV","G","T","Homozygous",20,20,100,1,9,14,0.39,37.8,23,23,11,16,null,1,1,"no","T/T","No",1,81.7,"XP_972111.1:c.2490G>T","XP_972111.1:p.Met830Ile","LOC660815",660815,null,"660815 [Gene Symbol: LOC660815] [Locus Tag: TcasGA2_TC003352] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase-like otk] [Gene Type: protein-coding]","TcasGA2_TC003352; LOC660815"]
[225,"NC_007418.3","2816172..2816173","MNV","CA","TG","Heterozygous",17,22,77.27,1,7,11,0.39,39.71,18,25,10,14,2.39,0.63,1,"no","complex","No",1,200,"XP_015833187.1:c.[267_268delTGinsCA]; XP_008190779.1:c.[633_634delTGinsCA]","XP_015833187.1:p.[Asp90Asn]; XP_008190779.1:p.[Asp212Asn]","LOC103312285",103312285,null,"103312285 [Gene Symbol: LOC103312285] [Locus Tag: TcasGA2_TC003066] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312285; TcasGA2_TC003066"]
[226,"NC_007418.3",3456464,"SNV","A","G","Homozygous",23,23,100,1,18,13,0.42,37.96,31,31,15,17,null,1,1,"no","G/G","No",1,89.12,"XP_015833184.1:c.[1393A>G]; XP_968570.1:c.[2101A>G]","XP_015833184.1:p.[Asn465Asp]; XP_968570.1:p.[Asn701Asp]","LOC656984",656984,null,"656984 [Gene Symbol: LOC656984] [Locus Tag: TcasGA2_TC001556] [Chromosome: LG3] [Map Location: ] [Description: peroxidasin] [Gene Type: protein-coding]","Pxn; LOC656984; TcasGA2_TC001556"]
[227,"NC_007418.3",3785574,"SNV","T","C","Homozygous",21,21,100,1,15,7,0.32,38.1,22,22,16,16,null,1,1,"no","C/C","No",1,83.12,"XP_008200301.1:c.119T>C","XP_008200301.1:p.Val40Ala","LOC103314889",103314889,null,"103314889 [Gene Symbol: LOC103314889] [Locus Tag: TcasGA2_TC034581] [Chromosome: LG3] [Map Location: LG3|LGX] [Description: uncharacterized LOC103314889] [Gene Type: protein-coding]","TcasGA2_TC034581; LOC103314889"]
[229,"NC_007418.3",3856109,"SNV","A","G","Homozygous",21,21,100,1,10,15,0.4,36.76,25,25,10,15,null,1,1,"no","G/G","No",1,83.1,"XP_015833077.1:c.[1669A>G]; XP_008200294.1:c.[1669A>G]","XP_015833077.1:p.[Asn557Asp]; XP_008200294.1:p.[Asn557Asp]","LOC100142377",100142377,null,"100142377 [Gene Symbol: LOC100142377] [Locus Tag: TcasGA2_TC011553] [Chromosome: LG3] [Map Location: ] [Description: myosin 1B] [Gene Type: protein-coding]","Myo1B; LOC100142377; TcasGA2_TC011553"]
[230,"NC_007418.3",3866859,"SNV","C","G","Heterozygous",11,23,47.83,1,11,0,0,36.36,11,24,4,11,-3.29,0.12,0.34,"no","C/G","No",1,88.61,"XP_008200296.1:c.1323G>C","XP_008200296.1:p.Gln441His","LOC660207",660207,null,"660207 [Gene Symbol: LOC660207] [Locus Tag: TcasGA2_TC011508] [Chromosome: LG3] [Map Location: ] [Description: contactin-associated protein-like 3] [Gene Type: protein-coding]","TcasGA2_TC011508; LOC660207"]
[231,"NC_007418.3",4033555,"SNV","G","C","Homozygous",29,29,100,1,17,13,0.43,37.14,30,30,16,18,null,1,1,"no","C/C","No",1,107.2,"XP_971269.1:c.311G>C","XP_971269.1:p.Ser104Thr","LOC659910",659910,null,"659910 [Gene Symbol: LOC659910] [Locus Tag: TcasGA2_TC003033] [Chromosome: LG3] [Map Location: ] [Description: mitochondrial inner membrane protease ATP23 homolog] [Gene Type: protein-coding]","TcasGA2_TC003033; LOC659910"]
[232,"NC_007418.3",4142599,"SNV","A","T","Homozygous",20,20,100,1,9,14,0.39,36.1,23,23,9,15,null,1,1,"no","T/T","No",1,81.7,"XP_969027.1:c.799T>A","XP_969027.1:p.Ser267Thr","LOC657476",657476,null,"657476 [Gene Symbol: LOC657476] [Locus Tag: TcasGA2_TC003377] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC657476] [Gene Type: protein-coding]","LOC657476; TcasGA2_TC003377"]
[233,"NC_007418.3","4797072..4797073","MNV","CG","TT","Homozygous",21,21,100,1,12,15,0.44,37.57,27,27,17,17,null,1,1,"no","TT/TT","No",1,200,"XP_015833340.1:c.[3144_3145delCGinsAA]; XP_008190866.1:c.[3144_3145delCGinsAA]","XP_015833340.1:p.[Asp1048_Glu1049delinsGluLys]; XP_008190866.1:p.[Asp1048_Glu1049delinsGluLys]","LOC103312310",103312310,null,"103312310 [Gene Symbol: LOC103312310] [Locus Tag: TcasGA2_TC003005] [Chromosome: LG3] [Map Location: ] [Description: muscle M-line assembly protein unc-89] [Gene Type: protein-coding]","LOC103312310; TcasGA2_TC003005"]
[234,"NC_007418.3","4798244..4798245","MNV","GG","CT","Homozygous",20,20,100,1,14,10,0.42,36.58,24,24,13,14,null,1,1,"no","CT/CT","No",1,200,"XP_008190866.1:c.[1972_1973delCCinsAG]; XP_015833340.1:c.[1972_1973delCCinsAG]","XP_008190866.1:p.[Pro658Ser]; XP_015833340.1:p.[Pro658Ser]","LOC103312310",103312310,null,"103312310 [Gene Symbol: LOC103312310] [Locus Tag: TcasGA2_TC003005] [Chromosome: LG3] [Map Location: ] [Description: muscle M-line assembly protein unc-89] [Gene Type: protein-coding]","LOC103312310; TcasGA2_TC003005"]
[235,"NC_007418.3","4798287..4798288","MNV","GT","CG","Homozygous",20,20,100,1,6,17,0.26,39.1,23,23,13,17,null,1,1,"no","CG/CG","No",1,200,"XP_015833340.1:c.[1929_1930delACinsCG]; XP_008190866.1:c.[1929_1930delACinsCG]","XP_015833340.1:p.[Lys643_Pro644delinsAsnAla]; XP_008190866.1:p.[Lys643_Pro644delinsAsnAla]","LOC103312310",103312310,null,"103312310 [Gene Symbol: LOC103312310] [Locus Tag: TcasGA2_TC003005] [Chromosome: LG3] [Map Location: ] [Description: muscle M-line assembly protein unc-89] [Gene Type: protein-coding]","LOC103312310; TcasGA2_TC003005"]
[236,"NC_007418.3",5001239,"SNV","G","T","Homozygous",21,21,100,1,15,9,0.38,37.62,24,24,12,13,null,1,1,"no","T/T","No",1,84.7,"XP_970038.1:c.1875C>A","XP_970038.1:p.Asp625Glu","LOC658568",658568,null,"658568 [Gene Symbol: LOC658568] [Locus Tag: TcasGA2_TC003001] [Chromosome: LG3] [Map Location: ] [Description: WD repeat-containing protein 3] [Gene Type: protein-coding]","TcasGA2_TC003001; LOC658568"]
[237,"NC_007418.3",5013802,"SNV","T","C","Homozygous",22,22,100,1,12,13,0.48,37.82,25,25,12,16,null,1,1,"no","C/C","No",1,86.13,"XP_015833512.1:c.788A>G","XP_015833512.1:p.Lys263Arg","LOC658653",658653,null,"658653 [Gene Symbol: LOC658653] [Locus Tag: TcasGA2_TC003000] [Chromosome: LG3] [Map Location: ] [Description: cubitus interruptus] [Gene Type: protein-coding]","LOC658653; Ci; TcasGA2_TC003000"]
[238,"NC_007418.3",5150717,"SNV","A","G","Homozygous",22,22,100,1,15,10,0.4,38.18,25,25,13,15,null,1,1,"no","G/G","No",1,86.11,"XP_970503.2:c.364A>G","XP_970503.2:p.Ile122Val","LOC659078",659078,null,"659078 [Gene Symbol: LOC659078] [Locus Tag: TcasGA2_TC003434] [Chromosome: LG3] [Map Location: ] [Description: major facilitator superfamily domain-containing protein 6] [Gene Type: protein-coding]","LOC659078; TcasGA2_TC003434"]
[239,"NC_007418.3",5426190,"SNV","G","C","Homozygous",21,21,100,1,14,9,0.39,38.95,23,23,11,13,null,1,1,"no","C/C","No",1,83.12,"XP_972914.1:c.[186G>C]; XP_015833325.1:c.[186G>C]; XP_008190904.1:c.[186G>C]","XP_972914.1:p.[Glu62Asp]; XP_015833325.1:p.[Glu62Asp]; XP_008190904.1:p.[Glu62Asp]","LOC661672",661672,null,"661672 [Gene Symbol: LOC661672] [Locus Tag: TcasGA2_TC003462] [Chromosome: LG3] [Map Location: ] [Description: THUMP domain-containing protein 1 homolog] [Gene Type: protein-coding]","LOC661672; TcasGA2_TC003462"]
[240,"NC_007418.3",5426393,"SNV","G","A","Homozygous",22,22,100,1,11,14,0.44,38.86,25,25,13,17,null,1,1,"no","A/A","No",1,87.71,"XP_972914.1:c.[389G>A]; XP_008190904.1:c.[389G>A]; XP_015833325.1:c.[389G>A]","XP_972914.1:p.[Arg130Lys]; XP_008190904.1:p.[Arg130Lys]; XP_015833325.1:p.[Arg130Lys]","LOC661672",661672,null,"661672 [Gene Symbol: LOC661672] [Locus Tag: TcasGA2_TC003462] [Chromosome: LG3] [Map Location: ] [Description: THUMP domain-containing protein 1 homolog] [Gene Type: protein-coding]","LOC661672; TcasGA2_TC003462"]
[241,"NC_007418.3",5426471,"SNV","T","G","Homozygous",21,21,100,1,4,17,0.19,37.33,21,21,12,15,null,1,1,"no","G/G","No",1,83.1,"XP_008190904.1:c.[467T>G]; XP_015833325.1:c.[467T>G]; XP_972914.1:c.[467T>G]","XP_008190904.1:p.[Val156Gly]; XP_015833325.1:p.[Val156Gly]; XP_972914.1:p.[Val156Gly]","LOC661672",661672,null,"661672 [Gene Symbol: LOC661672] [Locus Tag: TcasGA2_TC003462] [Chromosome: LG3] [Map Location: ] [Description: THUMP domain-containing protein 1 homolog] [Gene Type: protein-coding]","LOC661672; TcasGA2_TC003462"]
[242,"NC_007418.3",5435539,"SNV","C","G","Homozygous",21,21,100,1,15,7,0.32,38.95,22,22,15,14,null,1,1,"no","G/G","No",1,83.1,"XP_008190905.1:c.2287G>C","XP_008190905.1:p.Ala763Pro","LOC661754",661754,null,"661754 [Gene Symbol: LOC661754] [Locus Tag: TcasGA2_TC002977] [Chromosome: LG3] [Map Location: ] [Description: BAI1-associated protein 3] [Gene Type: protein-coding]","TcasGA2_TC002977; LOC661754"]
[243,"NC_007418.3",5718125,"SNV","A","T","Homozygous",20,20,100,1,15,7,0.32,37.35,22,22,9,14,null,1,1,"no","T/T","No",1,81.69,"XP_015833269.1:c.[32741T>A]; XP_015833268.1:c.[32804T>A]; XP_015833270.1:c.[32804T>A]","XP_015833269.1:p.[Leu10914His]; XP_015833268.1:p.[Leu10935His]; XP_015833270.1:p.[Leu10935His]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[244,"NC_007418.3",5749024,"SNV","C","T","Homozygous",24,24,100,1,11,17,0.39,39.42,28,28,14,17,null,1,1,"no","T/T","No",1,93.72,"XP_015833270.1:c.[16114G>A]; XP_015833268.1:c.[16114G>A]; XP_015833269.1:c.[16051G>A]","XP_015833270.1:p.[Asp5372Asn]; XP_015833268.1:p.[Asp5372Asn]; XP_015833269.1:p.[Asp5351Asn]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[245,"NC_007418.3",5749366,"SNV","T","C","Homozygous",20,20,100,1,12,11,0.48,38,23,23,15,15,null,1,1,"no","C/C","No",1,80.12,"XP_015833270.1:c.[15772A>G]; XP_015833268.1:c.[15772A>G]; XP_015833269.1:c.[15709A>G]","XP_015833270.1:p.[Lys5258Glu]; XP_015833268.1:p.[Lys5258Glu]; XP_015833269.1:p.[Lys5237Glu]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[246,"NC_007418.3",5756521,"SNV","T","C","Homozygous",20,20,100,1,11,9,0.45,37.85,20,20,11,15,null,1,1,"no","C/C","No",1,80.12,"XP_015833270.1:c.[8617A>G]; XP_015833268.1:c.[8617A>G]; XP_015833269.1:c.[8554A>G]","XP_015833270.1:p.[Lys2873Glu]; XP_015833268.1:p.[Lys2873Glu]; XP_015833269.1:p.[Lys2852Glu]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[247,"NC_007418.3",5789031,"SNV","A","T","Homozygous",20,20,100,1,16,10,0.38,38.95,26,26,11,13,null,1,1,"no","T/T","No",1,81.7,"XP_974036.1:c.[3116T>A]; XP_015833277.1:c.[3116T>A]","XP_974036.1:p.[Leu1039Gln]; XP_015833277.1:p.[Leu1039Gln]","LOC662868",662868,null,"662868 [Gene Symbol: LOC662868] [Locus Tag: TcasGA2_TC002959] [Chromosome: LG3] [Map Location: ] [Description: hamartin] [Gene Type: protein-coding]","LOC662868; TcasGA2_TC002959"]
[248,"NC_007418.3",5791012,"SNV","A","T","Homozygous",21,21,100,1,11,15,0.42,36,26,26,12,12,null,1,1,"no","T/T","No",1,84.71,"XP_974036.1:c.[1420T>A]; XP_015833277.1:c.[1420T>A]","XP_974036.1:p.[Cys474Ser]; XP_015833277.1:p.[Cys474Ser]","LOC662868",662868,null,"662868 [Gene Symbol: LOC662868] [Locus Tag: TcasGA2_TC002959] [Chromosome: LG3] [Map Location: ] [Description: hamartin] [Gene Type: protein-coding]","LOC662868; TcasGA2_TC002959"]
[249,"NC_007418.3",5977777,"SNV","C","G","Homozygous",20,20,100,1,13,7,0.35,36.35,20,20,8,10,null,1,1,"no","G/G","No",1,80.09,"XP_974693.1:c.348G>C","XP_974693.1:p.Lys116Asn","LOC663561",663561,null,"663561 [Gene Symbol: LOC663561] [Locus Tag: TcasGA2_TC002942] [Chromosome: LG3] [Map Location: ] [Description: zinc transporter ZIP1] [Gene Type: protein-coding]","TcasGA2_TC002942; LOC663561"]
[250,"NC_007418.3",6634184,"SNV","C","A","Homozygous",21,21,100,1,11,13,0.46,37.1,24,24,13,17,null,1,1,"no","A/A","No",1,84.7,"XP_015833347.1:c.6875C>A","XP_015833347.1:p.Thr2292Asn","LOC664216",664216,null,"664216 [Gene Symbol: LOC664216] [Locus Tag: TcasGA2_TC003537] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC664216] [Gene Type: protein-coding]","TcasGA2_TC003537; LOC664216"]
[251,"NC_007418.3","6642406^6642407","Insertion","-","A","Homozygous",20,20,100,1,16,7,0.3,37.15,23,23,14,10,null,1,1,"no","A/A","No",1,81.69,"XP_015833347.1:c.8355_8356insA","XP_015833347.1:p.Asn2786fs","LOC664216",664216,null,"664216 [Gene Symbol: LOC664216] [Locus Tag: TcasGA2_TC003537] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC664216] [Gene Type: protein-coding]","TcasGA2_TC003537; LOC664216"]
[252,"NC_007418.3",6758724,"SNV","T","C","Homozygous",24,24,100,1,8,16,0.33,37.5,24,24,11,20,null,1,1,"no","C/C","No",1,92.15,"XP_008191009.1:c.2894A>G","XP_008191009.1:p.Lys965Arg","LOC664250",664250,null,"664250 [Gene Symbol: LOC664250] [Locus Tag: TcasGA2_TC002906] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC664250] [Gene Type: protein-coding]","LOC664250; TcasGA2_TC002906"]
[253,"NC_007418.3",6823279,"SNV","C","T","Homozygous",40,40,100,1,37,7,0.16,39.05,44,44,19,21,null,1,1,"no","T/T","No",1,141.84,"XP_008191016.1:c.382G>A","XP_008191016.1:p.Val128Met","LOC103312349",103312349,null,"103312349 [Gene Symbol: LOC103312349] [Locus Tag: TcasGA2_TC002904] [Chromosome: LG3] [Map Location: ] [Description: putative inositol monophosphatase 3] [Gene Type: protein-coding]","TcasGA2_TC002904; LOC103312349"]
[254,"NC_007418.3","6831210^6831211","Insertion","-","ACG","Homozygous",29,29,100,1,14,16,0.47,36.68,30,30,17,19,null,1,1,"no","ACG/ACG","No",1,200,"XP_975371.1:c.526_527insACG","XP_975371.1:p.Asn176_Glu177insAsp","LOC664269",664269,null,"664269 [Gene Symbol: LOC664269] [Locus Tag: TcasGA2_TC003540] [Chromosome: LG3] [Map Location: ] [Description: glycogen-binding subunit 76A] [Gene Type: protein-coding]","TcasGA2_TC003540; LOC664269"]
[255,"NC_007418.3",7043504,"SNV","A","G","Homozygous",23,23,100,1,8,18,0.31,37.39,26,26,11,15,null,1,1,"no","G/G","No",1,89.12,"XP_975437.1:c.289T>C","XP_975437.1:p.Ser97Pro","LOC664335",664335,null,"664335 [Gene Symbol: LOC664335] [Locus Tag: TcasGA2_TC002894] [Chromosome: LG3] [Map Location: ] [Description: probable serine hydrolase] [Gene Type: protein-coding]","LOC664335; TcasGA2_TC002894"]
[256,"NC_007418.3",7129598,"SNV","G","A","Homozygous",26,26,100,1,18,8,0.31,38.81,26,26,10,20,null,1,1,"no","A/A","No",1,99.74,"XP_975456.1:c.[55C>T]; XP_008191036.1:c.[502-8841G>A]; XP_008191037.1:c.[502-8841G>A]","XP_975456.1:p.Pro19Ser","LOC664359, LOC664352","664359 , 664352",null,"664359 [Gene Symbol: LOC664359] [Locus Tag: TcasGA2_TC003550] [Chromosome: LG3] [Map Location: ] [Description: sestrin homolog] [Gene Type: protein-coding] || 664352 [Gene Symbol: LOC664352] [Locus Tag: TcasGA2_TC002890] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC664352] [Gene Type: protein-coding]","LOC664359; TcasGA2_TC003550 || TcasGA2_TC002890; LOC664352"]
[257,"NC_007418.3",7525934,"SNV","G","A","Homozygous",20,20,100,1,5,15,0.25,35.8,20,20,11,12,null,1,1,"no","A/A","No",1,81.69,"XP_967064.1:c.6677C>T","XP_967064.1:p.Thr2226Ile","LOC655426",655426,null,"655426 [Gene Symbol: LOC655426] [Locus Tag: TcasGA2_TC002881] [Chromosome: LG3] [Map Location: ] [Description: E3 SUMO-protein ligase RanBP2] [Gene Type: protein-coding]","TcasGA2_TC002881; LOC655426"]
[258,"NC_007418.3",7530076,"SNV","T","G","Homozygous",26,26,100,1,15,22,0.41,37.23,37,37,14,18,null,1,1,"no","G/G","No",1,98.15,"XP_967064.1:c.3680A>C","XP_967064.1:p.Asn1227Thr","LOC655426",655426,null,"655426 [Gene Symbol: LOC655426] [Locus Tag: TcasGA2_TC002881] [Chromosome: LG3] [Map Location: ] [Description: E3 SUMO-protein ligase RanBP2] [Gene Type: protein-coding]","TcasGA2_TC002881; LOC655426"]
[259,"NC_007418.3",7532876,"SNV","G","A","Homozygous",26,26,100,1,12,16,0.43,38.38,28,28,16,16,null,1,1,"no","A/A","No",1,99.74,"XP_967064.1:c.880C>T","XP_967064.1:p.His294Tyr","LOC655426",655426,null,"655426 [Gene Symbol: LOC655426] [Locus Tag: TcasGA2_TC002881] [Chromosome: LG3] [Map Location: ] [Description: E3 SUMO-protein ligase RanBP2] [Gene Type: protein-coding]","TcasGA2_TC002881; LOC655426"]
[260,"NC_007418.3",7596827,"SNV","T","C","Homozygous",20,20,100,1,8,12,0.4,38.6,20,20,13,17,null,1,1,"no","C/C","No",1,80.12,"XP_967495.1:c.5863A>G","XP_967495.1:p.Thr1955Ala","LOC655839",655839,null,"655839 [Gene Symbol: LOC655839] [Locus Tag: TcasGA2_TC002876] [Chromosome: LG3] [Map Location: ] [Description: HEAT repeat-containing protein 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC002876; LOC655839"]
[261,"NC_007418.3",7611133,"SNV","G","C","Homozygous",25,25,100,1,10,20,0.33,39.08,30,30,12,14,null,1,1,"no","C/C","No",1,95.16,"XP_008191066.1:c.[2175C>G]; XP_008191067.1:c.[1279+2296G>C]","XP_008191066.1:p.Ser725Arg","LOC103312366, LOC656169","103312366 , 656169",null,"103312366 [Gene Symbol: LOC103312366] [Locus Tag: TcasGA2_TC003567] [Chromosome: LG3] [Map Location: ] [Description: maternal embryonic leucine zipper kinase] [Gene Type: protein-coding] || 656169 [Gene Symbol: LOC656169] [Locus Tag: TcasGA2_TC002875] [Chromosome: LG3] [Map Location: ] [Description: elongation factor Tu GTP-binding domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC003567; LOC103312366 || LOC656169; TcasGA2_TC002875"]
[262,"NC_007418.3",8042509,"SNV","G","C","Homozygous",20,20,100,1,10,13,0.43,39.5,23,23,13,12,null,1,1,"no","C/C","No",1,80.11,"XP_015833523.1:c.214C>G","XP_015833523.1:p.Arg72Gly","LOC657250",657250,null,"657250 [Gene Symbol: LOC657250] [Locus Tag: TcasGA2_TC002858] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: neutral alpha-glucosidase AB] [Gene Type: protein-coding]","LOC657250; TcasGA2_TC002858"]
[263,"NC_007418.3",8045386,"SNV","C","T","Homozygous",21,21,100,1,8,13,0.38,37.81,21,21,9,12,null,1,1,"no","T/T","No",1,84.7,"XP_968957.1:c.731G>A","XP_968957.1:p.Arg244Lys","LOC657402",657402,null,"657402 [Gene Symbol: LOC657402] [Locus Tag: TcasGA2_TC002857] [Chromosome: LG3] [Map Location: ] [Description: aspartate--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC657402; TcasGA2_TC002857"]
[264,"NC_007418.3",8154624,"SNV","C","T","Homozygous",26,26,100,1,6,21,0.22,38.12,27,27,18,15,null,1,1,"no","T/T","No",1,99.74,"XP_008191810.1:c.[1196C>T]; XP_008191799.1:c.[1319C>T]; XP_008191804.1:c.[1196C>T]","XP_008191810.1:p.[Ala399Val]; XP_008191799.1:p.[Ala440Val]; XP_008191804.1:p.[Ala399Val]","LOC103312586",103312586,null,"103312586 [Gene Symbol: LOC103312586] [Locus Tag: TcasGA2_TC003588] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312586; TcasGA2_TC003588"]
[265,"NC_007418.3",8154640,"SNV","A","G","Homozygous",23,23,100,1,7,16,0.3,38.48,23,23,15,14,null,1,1,"no","G/G","No",1,89.12,"XP_008191804.1:c.[1212A>G]; XP_008191810.1:c.[1212A>G]; XP_008191799.1:c.[1335A>G]","XP_008191804.1:p.[Ile404Met]; XP_008191810.1:p.[Ile404Met]; XP_008191799.1:p.[Ile445Met]","LOC103312586",103312586,null,"103312586 [Gene Symbol: LOC103312586] [Locus Tag: TcasGA2_TC003588] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312586; TcasGA2_TC003588"]
[266,"NC_007418.3",8494624,"SNV","C","A","Heterozygous",13,41,31.71,1,9,4,0.31,40,13,47,12,11,3.46,0.04,0.45,"no","A/C","No",1,60.63,"XP_008191839.1:c.147C>A","XP_008191839.1:p.Asn49Lys","LOC103312598",103312598,null,"103312598 [Gene Symbol: LOC103312598] [Locus Tag: TcasGA2_TC003592] [Chromosome: LG3] [Map Location: ] [Description: major royal jelly protein 3] [Gene Type: protein-coding]","TcasGA2_TC003592; LOC103312598"]
[267,"NC_007418.3",8494721,"SNV","G","A","Heterozygous",17,62,27.42,1,9,10,0.47,37.76,19,67,13,13,0.41,0.5,0.98,"no","A/G","No",1,56.72,"XP_008191839.1:c.244G>A","XP_008191839.1:p.Glu82Lys","LOC103312598",103312598,null,"103312598 [Gene Symbol: LOC103312598] [Locus Tag: TcasGA2_TC003592] [Chromosome: LG3] [Map Location: ] [Description: major royal jelly protein 3] [Gene Type: protein-coding]","TcasGA2_TC003592; LOC103312598"]
[269,"NC_007418.3",8806795,"SNV","G","C","Homozygous",20,20,100,1,11,11,0.5,36.5,22,22,10,16,null,1,1,"no","C/C","No",1,80.11,"XP_008191645.2:c.2133C>G","XP_008191645.2:p.Asp711Glu","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[270,"NC_007418.3",8807527,"SNV","T","G","Homozygous",22,22,100,1,12,12,0.5,36,24,24,10,13,null,1,1,"no","G/G","No",1,86.11,"XP_008191645.2:c.1401A>C","XP_008191645.2:p.Gln467His","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[271,"NC_007418.3",8807549,"SNV","A","G","Homozygous",20,20,100,1,10,13,0.43,35.8,23,23,11,11,null,1,1,"no","G/G","No",1,80.1,"XP_008191645.2:c.1379T>C","XP_008191645.2:p.Phe460Ser","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[272,"NC_007418.3","9126248^9126249","Insertion","-","ATA","Homozygous",20,20,100,1,5,16,0.24,38.48,21,21,13,14,null,1,1,"no","ATA/ATA","No",1,200,"XP_015833339.1:c.[364_365insTAT]; XP_008192138.1:c.[1350+274_1350+275insATA]; XP_008192125.1:c.[1350+274_1350+275insATA]; XP_008192132.1:c.[1350+274_1350+275insATA]; XP_008192144.1:c.[1335+274_1335+275insATA]; XP_008192114.1:c.[1350+274_1350+275insATA]","XP_015833339.1:p.Val121_Ser122insLeu","LOC100141866, LOC107397509","100141866 , 107397509",null,"100141866 [Gene Symbol: LOC100141866] [Locus Tag: TcasGA2_TC003616] [Chromosome: LG3] [Map Location: ] [Description: protein tramtrack, alpha isoform] [Gene Type: protein-coding] || 107397509 [Gene Symbol: LOC107397509] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397509] [Gene Type: protein-coding]","LOC100141866; TcasGA2_TC003616 || LOC107397509"]
[273,"NC_007418.3","9292583..9292584","MNV","TT","CC","Homozygous",20,20,100,1,4,18,0.18,37.75,22,22,13,17,null,1,1,"no","CC/CC","No",1,200,"XP_008192271.1:c.1223_1224delAAinsGG","XP_008192271.1:p.Gln408Arg","LOC100141585",100141585,null,"100141585 [Gene Symbol: LOC100141585] [Locus Tag: TcasGA2_TC030754] [Chromosome: LG3] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC100141585; TcasGA2_TC030754"]
[274,"NC_007418.3",9638798,"SNV","T","C","Homozygous",26,26,100,1,18,15,0.45,37.62,33,33,15,18,null,1,1,"no","C/C","No",1,98.15,"XP_008192366.1:c.[3293A>G]; XP_015833405.1:c.[3293A>G]; XP_015833406.1:c.[2690A>G]; XP_008192372.1:c.[3293A>G]","XP_008192366.1:p.[Asp1098Gly]; XP_015833405.1:p.[Asp1098Gly]; XP_015833406.1:p.[Asp897Gly]; XP_008192372.1:p.[Asp1098Gly]","LOC659912",659912,null,"659912 [Gene Symbol: LOC659912] [Locus Tag: TcasGA2_TC002804] [Chromosome: LG3] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","LOC659912; TcasGA2_TC002804"]
[275,"NC_007418.3",9746250,"SNV","A","T","Homozygous",20,20,100,1,3,17,0.15,36.4,20,20,10,12,null,1,1,"no","T/T","No",1,81.7,"XP_008192389.1:c.260T>A","XP_008192389.1:p.Leu87His","LOC103312734",103312734,null,"103312734 [Gene Symbol: LOC103312734] [Locus Tag: TcasGA2_TC002799] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312734] [Gene Type: protein-coding]","LOC103312734; TcasGA2_TC002799"]
[276,"NC_007418.3",10573895,"SNV","C","T","Homozygous",27,27,100,1,10,18,0.36,36.52,28,28,13,14,null,1,1,"no","T/T","No",1,99.75,"XP_972784.2:c.34C>T","XP_972784.2:p.Leu12Phe","LOC103312803, LOC661540","103312803 , 661540",null,"103312803 [Gene Symbol: LOC103312803] [Locus Tag: TcasGA2_TC002783] [Chromosome: LG3] [Map Location: ] [Description: early growth response protein 1] [Gene Type: protein-coding] || 661540 [Gene Symbol: LOC661540] [Locus Tag: TcasGA2_TC003648] [Chromosome: LG3] [Map Location: ] [Description: syntaxin-17] [Gene Type: protein-coding]","TcasGA2_TC002783; LOC103312803 || TcasGA2_TC003648; LOC661540"]
[277,"NC_007418.3",10704490,"SNV","C","T","Homozygous",21,21,100,1,10,15,0.4,36.43,25,25,13,13,null,1,1,"no","T/T","No",1,84.7,"XP_972452.1:c.619C>T","XP_972452.1:p.Pro207Ser","LOC661180",661180,null,"661180 [Gene Symbol: LOC661180] [Locus Tag: TcasGA2_TC000042] [Chromosome: LG3] [Map Location: ] [Description: probable glutamine--tRNA ligase] [Gene Type: protein-coding]","LOC661180; TcasGA2_TC000042"]
[279,"NC_007418.3","10732270..10732272","MNV","TCT","AGA","Heterozygous",5,23,21.74,1,5,0,0,39.13,5,26,4,4,-1.68,0.43,0.22,"no","complex","No",1,200,"XP_008199567.1:c.219_221delAGAinsTCT","XP_008199567.1:p.Lys73_Asp74delinsAsnLeu","LOC103314697",103314697,null,"103314697 [Gene Symbol: LOC103314697] [Locus Tag: TcasGA2_TC000135] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314697] [Gene Type: protein-coding]","LOC103314697; TcasGA2_TC000135"]
[282,"NC_007418.3",10854680,"SNV","A","G","Homozygous",22,22,100,1,13,13,0.5,38.5,26,26,12,14,null,1,1,"no","G/G","No",1,86.11,"XP_970625.1:c.835A>G","XP_970625.1:p.Asn279Asp","LOC659205",659205,null,"659205 [Gene Symbol: LOC659205] [Locus Tag: TcasGA2_TC000060] [Chromosome: LG3] [Map Location: ] [Description: tRNA dimethylallyltransferase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC000060; LOC659205"]
[283,"NC_007418.3",10978803,"SNV","G","A","Homozygous",21,21,100,1,10,13,0.43,38.81,23,23,10,12,null,1,1,"no","A/A","No",1,84.7,"XP_970014.1:c.236C>T","XP_970014.1:p.Ser79Leu","LOC658539",658539,null,"658539 [Gene Symbol: LOC658539] [Locus Tag: TcasGA2_TC000114] [Chromosome: LG3] [Map Location: ] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC000114; LOC658539"]
[284,"NC_007418.3",11049678,"SNV","T","G","Homozygous",20,20,100,1,15,10,0.4,37.95,25,25,13,16,null,1,1,"no","G/G","No",1,80.09,"XP_008199533.1:c.407A>C","XP_008199533.1:p.Asn136Thr","LOC657918",657918,null,"657918 [Gene Symbol: LOC657918] [Locus Tag: TcasGA2_TC000110] [Chromosome: LG3] [Map Location: ] [Description: transcription termination factor 2] [Gene Type: protein-coding]","TcasGA2_TC000110; LOC657918"]
[285,"NC_007418.3",11170866,"SNV","G","C","Heterozygous",10,25,40,1,8,3,0.27,38.8,11,28,7,7,1.61,0.34,0.37,"no","C/G","No",1,70.5,"XP_015833486.1:c.[50-9604C>G]; XP_015833482.1:c.[50-9604C>G]; XP_008199525.1:c.[50-9604C>G]; XP_015833483.1:c.[50-9604C>G]; XP_015833487.1:c.[50-9604C>G]; XP_015833473.1:c.[1855G>C]; XP_008199522.1:c.[50-9604C>G]; XP_015833484.1:c.[50-9604C>G]; XP_015833485.1:c.[50-9604C>G]; XP_008199524.1:c.[50-9604C>G]","XP_015833473.1:p.Val619Leu","LOC657135, LOC103312144","657135 , 103312144",null,"657135 [Gene Symbol: LOC657135] [Locus Tag: TcasGA2_TC000103] [Chromosome: LG3] [Map Location: ] [Description: serine/threonine-protein phosphatase 2B catalytic subunit 2] [Gene Type: protein-coding] || 103312144 [Gene Symbol: LOC103312144] [Locus Tag: TcasGA2_TC000071] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312144] [Gene Type: protein-coding]","TcasGA2_TC000103; LOC657135 || LOC103312144; TcasGA2_TC000071"]
[286,"NC_007418.3",11493509,"SNV","T","C","Homozygous",21,21,100,1,6,17,0.26,37.52,23,23,11,16,null,1,1,"no","C/C","No",1,83.11,"XP_008199507.1:c.2480A>G","XP_008199507.1:p.Asn827Ser","LOC100141909",100141909,null,"100141909 [Gene Symbol: LOC100141909] [Locus Tag: TcasGA2_TC000086] [Chromosome: LG3] [Map Location: ] [Description: fibrillin-2] [Gene Type: protein-coding]","LOC100141909; TcasGA2_TC000086"]
[287,"NC_007418.3",11493574,"SNV","G","T","Homozygous",22,22,100,1,16,9,0.36,37.5,25,25,9,15,null,1,1,"no","T/T","No",1,87.71,"XP_008199507.1:c.2415C>A","XP_008199507.1:p.Asp805Glu","LOC100141909",100141909,null,"100141909 [Gene Symbol: LOC100141909] [Locus Tag: TcasGA2_TC000086] [Chromosome: LG3] [Map Location: ] [Description: fibrillin-2] [Gene Type: protein-coding]","LOC100141909; TcasGA2_TC000086"]
[288,"NC_007418.3",11493643,"SNV","A","T","Homozygous",22,22,100,1,13,12,0.48,36.91,25,25,16,16,null,1,1,"no","T/T","No",1,87.71,"XP_008199507.1:c.2346T>A","XP_008199507.1:p.Ser782Arg","LOC100141909",100141909,null,"100141909 [Gene Symbol: LOC100141909] [Locus Tag: TcasGA2_TC000086] [Chromosome: LG3] [Map Location: ] [Description: fibrillin-2] [Gene Type: protein-coding]","LOC100141909; TcasGA2_TC000086"]
[289,"NC_007418.3",11494060,"SNV","T","A","Homozygous",21,21,100,1,9,14,0.39,37.38,23,23,14,15,null,1,1,"no","A/A","No",1,84.7,"XP_008199507.1:c.1929A>T","XP_008199507.1:p.Glu643Asp","LOC100141909",100141909,null,"100141909 [Gene Symbol: LOC100141909] [Locus Tag: TcasGA2_TC000086] [Chromosome: LG3] [Map Location: ] [Description: fibrillin-2] [Gene Type: protein-coding]","LOC100141909; TcasGA2_TC000086"]
[290,"NC_007418.3",11515803,"SNV","T","C","Homozygous",21,21,100,1,7,14,0.33,35.29,21,21,12,12,null,1,1,"no","C/C","No",1,83.12,"NP_001153712.1:c.1150T>C","NP_001153712.1:p.*384Arg","LOC655157",655157,"catalase-like","655157 [Gene Symbol: LOC655157] [Locus Tag: TcasGA2_TC034503] [Chromosome: LG3] [Map Location: ] [Description: catalase-like] [Gene Type: protein-coding]","TcasGA2_TC034503; LOC655157"]
[292,"NC_007418.3",12172229,"SNV","A","G","Homozygous",26,26,100,1,7,19,0.27,37.65,26,26,12,15,null,1,1,"no","G/G","No",1,98.15,"XP_967967.1:c.526A>G","XP_967967.1:p.Lys176Glu","LOC656335",656335,null,"656335 [Gene Symbol: LOC656335] [Locus Tag: TcasGA2_TC003671] [Chromosome: LG3] [Map Location: ] [Description: probable DNA-3-methyladenine glycosylase] [Gene Type: protein-coding]","TcasGA2_TC003671; LOC656335"]
[293,"NC_007418.3",12172247,"SNV","T","A","Homozygous",24,24,100,1,4,20,0.17,37.62,24,24,10,12,null,1,1,"no","A/A","No",1,93.72,"XP_967967.1:c.544T>A","XP_967967.1:p.Cys182Ser","LOC656335",656335,null,"656335 [Gene Symbol: LOC656335] [Locus Tag: TcasGA2_TC003671] [Chromosome: LG3] [Map Location: ] [Description: probable DNA-3-methyladenine glycosylase] [Gene Type: protein-coding]","TcasGA2_TC003671; LOC656335"]
[294,"NC_007418.3",12961877,"SNV","C","T","Heterozygous",10,26,38.46,1,10,0,0,36.2,10,30,3,8,1.19,0.02,0.13,"no","C/T","No",1,70.55,"XP_008191127.1:c.[622G>A]; XP_015833615.1:c.[622G>A]; XP_008191129.1:c.[622G>A]; XP_008191135.1:c.[322G>A]; XP_008191132.1:c.[298G>A]; XP_008191131.1:c.[301G>A]; XP_008191128.1:c.[622G>A]","XP_008191127.1:p.[Gly208Ser]; XP_015833615.1:p.[Gly208Ser]; XP_008191129.1:p.[Gly208Ser]; XP_008191135.1:p.[Gly108Ser]; XP_008191132.1:p.[Gly100Ser]; XP_008191131.1:p.[Gly101Ser]; XP_008191128.1:p.[Gly208Ser]","LOC659574",659574,null,"659574 [Gene Symbol: LOC659574] [Locus Tag: TcasGA2_TC002730] [Chromosome: LG3] [Map Location: ] [Description: caskin-1] [Gene Type: protein-coding]","TcasGA2_TC002730; LOC659574"]
[296,"NC_007418.3",13594418,"SNV","T","C","Homozygous",20,20,100,1,6,18,0.25,36.8,24,24,9,11,null,1,1,"no","C/C","No",1,80.12,"XP_967066.1:c.1102A>G","XP_967066.1:p.Ile368Val","LOC655428",655428,null,"655428 [Gene Symbol: LOC655428] [Locus Tag: TcasGA2_TC002712] [Chromosome: LG3] [Map Location: ] [Description: nudC domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC002712; LOC655428"]
[297,"NC_007418.3",13594422,"SNV","G","T","Homozygous",21,21,100,1,7,17,0.29,37.1,24,24,11,13,null,1,1,"no","T/T","No",1,81.7,"XP_967066.1:c.1098C>A","XP_967066.1:p.Ser366Arg","LOC655428",655428,null,"655428 [Gene Symbol: LOC655428] [Locus Tag: TcasGA2_TC002712] [Chromosome: LG3] [Map Location: ] [Description: nudC domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC002712; LOC655428"]
[298,"NC_007418.3",13594484,"SNV","G","C","Homozygous",20,20,100,1,5,16,0.24,38.1,21,21,14,12,null,1,1,"no","C/C","No",1,80.11,"XP_967066.1:c.1036C>G","XP_967066.1:p.Pro346Ala","LOC655428",655428,null,"655428 [Gene Symbol: LOC655428] [Locus Tag: TcasGA2_TC002712] [Chromosome: LG3] [Map Location: ] [Description: nudC domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC002712; LOC655428"]
[299,"NC_007418.3","14026713..14026714","MNV","TT","CC","Heterozygous",8,22,36.36,1,5,3,0.38,39.62,8,22,5,6,0.55,0.77,0.72,"yes","complex","No",1,200,"XP_015833646.1:c.[1280_1281delTTinsCC]; XP_015833649.1:c.[53-9902_53-9901delAAinsGG]; XP_015833647.1:c.[1280_1281delTTinsCC]; XP_015833650.1:c.[53-9992_53-9991delAAinsGG]; XP_015833641.1:c.[1280_1281delTTinsCC]; XP_008191171.1:c.[126+2733_126+2734delTTinsCC]; XP_015833643.1:c.[1280_1281delTTinsCC]; XP_015833642.1:c.[1280_1281delTTinsCC]; XP_015833640.1:c.[1280_1281delTTinsCC]; XP_015833645.1:c.[1280_1281delTTinsCC]; XP_015833644.1:c.[1280_1281delTTinsCC]","XP_015833646.1:p.[Ile427Thr]; XP_015833647.1:p.[Ile427Thr]; XP_015833641.1:p.[Ile427Thr]; XP_015833643.1:p.[Ile427Thr]; XP_015833642.1:p.[Ile427Thr]; XP_015833640.1:p.[Ile427Thr]; XP_015833645.1:p.[Ile427Thr]; XP_015833644.1:p.[Ile427Thr]","LOC656062, LOC656669, LOC103312407","656062 , 656669 , 103312407",null,"656062 [Gene Symbol: LOC656062] [Locus Tag: TcasGA2_TC002698] [Chromosome: LG3] [Map Location: ] [Description: thioredoxin reductase 1, mitochondrial] [Gene Type: protein-coding] || 656669 [Gene Symbol: LOC656669] [Locus Tag: TcasGA2_TC003732] [Chromosome: LG3] [Map Location: ] [Description: C-factor] [Gene Type: protein-coding] || 103312407 [Gene Symbol: LOC103312407] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312407] [Gene Type: protein-coding]","LOC656062; TcasGA2_TC002698 || TcasGA2_TC003732; LOC656669 || LOC103312407"]
[301,"NC_007418.3",14026882,"SNV","T","G","Heterozygous",8,21,38.1,1,0,8,0,39.62,8,24,4,5,0.04,0.2,0.31,"no","G/T","No",1,56.82,"XP_015833643.1:c.[1449T>G]; XP_015833642.1:c.[1449T>G]; XP_015833641.1:c.[1449T>G]; XP_015833646.1:c.[1449T>G]; XP_015833640.1:c.[1449T>G]; XP_015833650.1:c.[53-10160A>C]; XP_008191171.1:c.[126+2902T>G]; XP_015833644.1:c.[1449T>G]; XP_015833649.1:c.[53-10070A>C]; XP_015833647.1:c.[1449T>G]; XP_015833645.1:c.[1449T>G]","XP_015833643.1:p.[Asp483Glu]; XP_015833642.1:p.[Asp483Glu]; XP_015833641.1:p.[Asp483Glu]; XP_015833646.1:p.[Asp483Glu]; XP_015833640.1:p.[Asp483Glu]; XP_015833644.1:p.[Asp483Glu]; XP_015833647.1:p.[Asp483Glu]; XP_015833645.1:p.[Asp483Glu]","LOC656062, LOC656669, LOC103312407","656062 , 656669 , 103312407",null,"656062 [Gene Symbol: LOC656062] [Locus Tag: TcasGA2_TC002698] [Chromosome: LG3] [Map Location: ] [Description: thioredoxin reductase 1, mitochondrial] [Gene Type: protein-coding] || 656669 [Gene Symbol: LOC656669] [Locus Tag: TcasGA2_TC003732] [Chromosome: LG3] [Map Location: ] [Description: C-factor] [Gene Type: protein-coding] || 103312407 [Gene Symbol: LOC103312407] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312407] [Gene Type: protein-coding]","LOC656062; TcasGA2_TC002698 || TcasGA2_TC003732; LOC656669 || LOC103312407"]
[303,"NC_007418.3",14122782,"SNV","G","A","Heterozygous",11,20,55,1,2,9,0.18,38.64,11,22,6,7,-0.61,0.39,0.44,"no","A/G","No",1,72.77,"XP_015833636.1:c.820G>A","XP_015833636.1:p.Gly274Arg","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[304,"NC_007418.3",14372125,"SNV","G","C","Homozygous",22,22,100,1,14,9,0.39,39.64,23,23,12,14,null,1,1,"no","C/C","No",1,86.13,"XP_015833657.1:c.301G>C","XP_015833657.1:p.Val101Leu","LOC658029",658029,null,"658029 [Gene Symbol: LOC658029] [Locus Tag: TcasGA2_TC032509] [Chromosome: LG3] [Map Location: ] [Description: cytochrome P450 6k1] [Gene Type: protein-coding]","LOC658029; CYP345D2; TcasGA2_TC032509"]
[305,"NC_007418.3","14372155..14372156","MNV","TT","GC","Heterozygous",5,20,25,1,3,2,0.4,36.3,5,23,3,5,0.3,0.13,0.89,"no","complex","No",1,200,"XP_015833657.1:c.331_332delTTinsGC","XP_015833657.1:p.Phe111Ala","LOC658029",658029,null,"658029 [Gene Symbol: LOC658029] [Locus Tag: TcasGA2_TC032509] [Chromosome: LG3] [Map Location: ] [Description: cytochrome P450 6k1] [Gene Type: protein-coding]","LOC658029; CYP345D2; TcasGA2_TC032509"]
[307,"NC_007418.3",14383198,"SNV","C","T","Heterozygous",14,22,63.64,1,5,12,0.29,38.43,17,26,10,12,1.13,0.89,0.97,"no","C/T","No",1,54.62,"XP_008190375.2:c.656C>T","XP_008190375.2:p.Ser219Leu","LOC103312175",103312175,null,"103312175 [Gene Symbol: LOC103312175] [Locus Tag: TcasGA2_TC032510] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312175] [Gene Type: protein-coding]","LOC103312175; TcasGA2_TC032510; Or327"]
[308,"NC_007418.3",14473908,"SNV","G","A","Heterozygous",11,23,47.83,1,8,6,0.43,35.27,14,30,5,8,-1.02,0.3,0.98,"no","A/G","No",1,88.71,"XP_008199271.1:c.482C>T","XP_008199271.1:p.Ala161Val","LOC655963",655963,null,"655963 [Gene Symbol: LOC655963] [Locus Tag: TcasGA2_TC010521] [Chromosome: LG3] [Map Location: ] [Description: probable palmitoyltransferase ZDHHC1] [Gene Type: protein-coding]","TcasGA2_TC010521; LOC655963"]
[309,"NC_007418.3",14923401,"SNV","T","C","Homozygous",22,23,95.65,1,14,9,0.39,38.82,23,24,16,15,null,1,1,"no","C/C","No",1,61.21,"XP_968632.1:c.[1067T>C]; XP_008199234.1:c.[158T>C]","XP_968632.1:p.[Leu356Ser]; XP_008199234.1:p.[Leu53Ser]","LOC657051",657051,null,"657051 [Gene Symbol: LOC657051] [Locus Tag: TcasGA2_TC010540] [Chromosome: LG3] [Map Location: ] [Description: laminin subunit gamma-1] [Gene Type: protein-coding]","LOC657051; TcasGA2_TC010540"]
[311,"NC_007418.3",15070145,"SNV","C","A","Heterozygous",10,26,38.46,1,1,10,0.09,39.6,11,27,5,4,1.69,{"v":0.00557,"d":"5.57E-03"},0.09,"no","A/C","No",1,64.15,"XP_008199242.1:c.[1715-7224C>A]; XP_015833667.1:c.[871G>T]; XP_008199245.1:c.[86-7224C>A]; XP_008199246.1:c.[1715-7224C>A]; XP_015833666.1:c.[871G>T]; XP_015833670.1:c.[871G>T]; XP_015833665.1:c.[152-7224C>A]; XP_008199241.1:c.[1715-7224C>A]; XP_008199239.2:c.[805G>T]; XP_008199244.1:c.[1715-7224C>A]; XP_015833669.1:c.[871G>T]; XP_008199240.1:c.[1715-7224C>A]; XP_008199243.1:c.[1715-7224C>A]; XP_008199236.2:c.[871G>T]","XP_015833667.1:p.[Gly291Cys]; XP_015833666.1:p.[Gly291Cys]; XP_015833670.1:p.[Gly291Cys]; XP_008199239.2:p.[Gly269Cys]; XP_015833669.1:p.[Gly291Cys]; XP_008199236.2:p.[Gly291Cys]","LOC657292, LOC103314596","657292 , 103314596",null,"657292 [Gene Symbol: LOC657292] [Locus Tag: TcasGA2_TC010542] [Chromosome: LG3] [Map Location: ] [Description: disco-interacting protein 2] [Gene Type: protein-coding] || 103314596 [Gene Symbol: LOC103314596] [Locus Tag: TcasGA2_TC010509] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314596] [Gene Type: protein-coding]","LOC657292; TcasGA2_TC010542 || LOC103314596; TcasGA2_TC010509"]
[314,"NC_007418.3",15660251,"SNV","A","G","Homozygous",23,23,100,1,6,17,0.26,37.78,23,23,11,11,null,1,1,"no","G/G","No",1,89.12,"XP_008199265.1:c.628A>G","XP_008199265.1:p.Lys210Glu","LOC103314602",103314602,null,"103314602 [Gene Symbol: LOC103314602] [Locus Tag: TcasGA2_TC010558] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314602; TcasGA2_TC010558"]
[315,"NC_007418.3",16928941,"SNV","C","T","Homozygous",23,23,100,1,15,14,0.48,35.7,29,29,9,14,null,1,1,"no","T/T","No",1,90.73,"XP_015833814.1:c.[5C>T]; XP_015833815.1:c.[5C>T]; XP_008191262.1:c.[5C>T]; XP_008191260.1:c.[5C>T]","XP_015833814.1:p.[Pro2Leu]; XP_015833815.1:p.[Pro2Leu]; XP_008191262.1:p.[Pro2Leu]; XP_008191260.1:p.[Pro2Leu]","LOC103312431",103312431,null,"103312431 [Gene Symbol: LOC103312431] [Locus Tag: TcasGA2_TC002650] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC002650; LOC103312431"]
[316,"NC_007418.3",17153563,"SNV","C","T","Heterozygous",14,31,45.16,1,13,3,0.19,39,16,33,8,9,-2.7,0.95,0.83,"no","C/T","No",1,104.66,"XP_015833782.1:c.362C>T","XP_015833782.1:p.Pro121Leu","LOC107397596",107397596,null,"107397596 [Gene Symbol: LOC107397596] [Locus Tag: TcasGA2_TC002657] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized protein K02A2.6-like] [Gene Type: protein-coding]","TcasGA2_TC002657; LOC107397596"]
[317,"NC_007418.3",17153588,"SNV","G","T","Heterozygous",16,33,48.48,1,12,6,0.33,38.31,18,39,10,10,-0.79,0.2,0.99,"no","G/T","No",1,121.26,"XP_015833782.1:c.387G>T","XP_015833782.1:p.Gln129His","LOC107397596",107397596,null,"107397596 [Gene Symbol: LOC107397596] [Locus Tag: TcasGA2_TC002657] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized protein K02A2.6-like] [Gene Type: protein-coding]","TcasGA2_TC002657; LOC107397596"]
[320,"NC_007418.3",17584595,"SNV","C","A","Heterozygous",17,31,54.84,1,8,13,0.38,38.71,21,36,11,12,-0.48,0.87,0.99,"no","A/C","No",1,105.78,"XP_015833805.1:c.439C>A","XP_015833805.1:p.Leu147Ile","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[321,"NC_007418.3","17584597..17584598","MNV","TC","CT","Heterozygous",7,31,22.58,1,4,4,0.5,40,8,36,6,6,null,0.41,0.99,"no","complex","No",1,200,"XP_015833805.1:c.441_442delTCinsCT","XP_015833805.1:p.Gln148*","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[322,"NC_007418.3",17584619,"SNV","A","C","Heterozygous",10,25,40,1,6,4,0.4,39.3,10,28,6,8,1.89,0.92,0.89,"no","A/C","No",1,71.4,"XP_015833805.1:c.463A>C","XP_015833805.1:p.Thr155Pro","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[323,"NC_007418.3",17584651,"SNV","A","T","Heterozygous",14,30,46.67,1,9,5,0.36,37.64,14,32,7,8,-0.85,0.58,0.92,"no","A/T","No",1,107.79,"XP_015833805.1:c.495A>T","XP_015833805.1:p.Leu165Phe","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[324,"NC_007418.3",17584656,"SNV","C","T","Heterozygous",7,27,25.93,1,2,5,0.29,38.29,7,30,6,7,0.77,0.64,0.77,"no","complex","No",1,148.08,"XP_015833805.1:c.500C>T","XP_015833805.1:p.Ser167Phe","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[325,"NC_007418.3",17584684,"SNV","T","A","Heterozygous",15,25,60,1,8,9,0.47,39.33,17,27,7,7,-0.39,0.22,0.99,"no","A/T","No",1,70.64,"XP_015833805.1:c.528T>A","XP_015833805.1:p.Cys176*","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[326,"NC_007418.3",17584715,"SNV","A","G","Homozygous",26,26,100,1,15,13,0.46,38.31,28,28,13,16,null,1,1,"no","G/G","No",1,98.14,"XP_015833805.1:c.559A>G","XP_015833805.1:p.Lys187Glu","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[329,"NC_007418.3",17902318,"SNV","G","T","Homozygous",25,25,100,1,11,14,0.44,37.76,25,25,14,20,null,1,1,"no","T/T","No",1,96.74,"XP_968591.1:c.64C>A","XP_968591.1:p.Gln22Lys","LOC657009",657009,null,"657009 [Gene Symbol: LOC657009] [Locus Tag: TcasGA2_TC003766] [Chromosome: LG3] [Map Location: ] [Description: ADP-ribosylation factor-like protein 6-interacting protein 4] [Gene Type: protein-coding]","LOC657009; TcasGA2_TC003766"]
[330,"NC_007418.3",17902320,"SNV","A","G","Homozygous",24,24,100,1,11,13,0.46,37.54,24,24,14,19,null,1,1,"no","G/G","No",1,92.13,"XP_968591.1:c.62T>C","XP_968591.1:p.Val21Ala","LOC657009",657009,null,"657009 [Gene Symbol: LOC657009] [Locus Tag: TcasGA2_TC003766] [Chromosome: LG3] [Map Location: ] [Description: ADP-ribosylation factor-like protein 6-interacting protein 4] [Gene Type: protein-coding]","LOC657009; TcasGA2_TC003766"]
[331,"NC_007418.3",17902330,"SNV","A","T","Homozygous",20,20,100,1,9,11,0.45,35.75,20,20,13,16,null,1,1,"no","T/T","No",1,81.69,"XP_968591.1:c.52T>A","XP_968591.1:p.Ser18Thr","LOC657009",657009,null,"657009 [Gene Symbol: LOC657009] [Locus Tag: TcasGA2_TC003766] [Chromosome: LG3] [Map Location: ] [Description: ADP-ribosylation factor-like protein 6-interacting protein 4] [Gene Type: protein-coding]","LOC657009; TcasGA2_TC003766"]
[332,"NC_007418.3",18433976,"SNV","G","T","Heterozygous",11,20,55,1,6,8,0.43,38.36,14,24,7,7,1.79,0.28,1,"no","G/T","No",1,72.31,"XP_008191203.1:c.[4639C>A]; XP_008191205.1:c.[4147C>A]; XP_008191204.1:c.[4708C>A]; XP_008191202.1:c.[4708C>A]","XP_008191203.1:p.[Leu1547Ile]; XP_008191205.1:p.[Leu1383Ile]; XP_008191204.1:p.[Leu1570Ile]; XP_008191202.1:p.[Leu1570Ile]","LOC103312419",103312419,null,"103312419 [Gene Symbol: LOC103312419] [Locus Tag: TcasGA2_TC003753] [Chromosome: LG3] [Map Location: ] [Description: maternal protein tudor] [Gene Type: protein-coding]","tud; LOC103312419; tudor; TcasGA2_TC003753"]
[333,"NC_007418.3",18444345,"SNV","C","T","Heterozygous",9,22,40.91,1,3,6,0.33,36.67,9,23,5,5,-0.73,0.94,0.51,"no","C/T","No",1,66.17,"XP_008191202.1:c.[1703G>A]; XP_008191203.1:c.[1703G>A]; XP_008191204.1:c.[1703G>A]; XP_008191205.1:c.[1142G>A]","XP_008191202.1:p.[Arg568Lys]; XP_008191203.1:p.[Arg568Lys]; XP_008191204.1:p.[Arg568Lys]; XP_008191205.1:p.[Arg381Lys]","LOC103312419",103312419,null,"103312419 [Gene Symbol: LOC103312419] [Locus Tag: TcasGA2_TC003753] [Chromosome: LG3] [Map Location: ] [Description: maternal protein tudor] [Gene Type: protein-coding]","tud; LOC103312419; tudor; TcasGA2_TC003753"]
[334,"NC_007418.3","18478156^18478157","Insertion","-","TGC","Homozygous",21,21,100,1,9,15,0.38,36.86,24,24,10,13,null,1,1,"no","TGC/TGC","No",1,200,"XP_015833722.1:c.[560_561insGCA]; XP_015833721.1:c.[503_504insGCA]; XP_015833720.1:c.[560_561insGCA]; XP_015833719.1:c.[560_561insGCA]","XP_015833722.1:p.[Gln192_Met193insGln]; XP_015833721.1:p.[Gln173_Met174insGln]; XP_015833720.1:p.[Gln192_Met193insGln]; XP_015833719.1:p.[Gln192_Met193insGln]","LOC655591, LOC655187","655591 , 655187",null,"655591 [Gene Symbol: LOC655591] [Locus Tag: TcasGA2_TC003752] [Chromosome: LG3] [Map Location: ] [Description: polyhomeotic] [Gene Type: protein-coding] || 655187 [Gene Symbol: LOC655187] [Locus Tag: TcasGA2_TC002688] [Chromosome: LG3] [Map Location: ] [Description: D-2-hydroxyglutarate dehydrogenase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC003752; ph; LOC655591 || LOC655187; TcasGA2_TC002688"]
[335,"NC_007418.3",18694558,"SNV","G","A","Heterozygous",12,22,54.55,1,7,5,0.42,39,12,22,5,9,1.29,0.69,1,"no","A/G","No",1,80,"XP_972555.3:c.13159C>T","XP_972555.3:p.Leu4387Phe","LOC661291",661291,null,"661291 [Gene Symbol: LOC661291] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: midasin] [Gene Type: protein-coding]","LOC661291; Mdn1"]
[336,"NC_007418.3",18694561,"SNV","C","T","Heterozygous",13,23,56.52,1,8,5,0.38,39.15,13,23,6,9,0.68,0.69,1,"no","C/T","No",1,77.38,"XP_972555.3:c.13156G>A","XP_972555.3:p.Asp4386Asn","LOC661291",661291,null,"661291 [Gene Symbol: LOC661291] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: midasin] [Gene Type: protein-coding]","LOC661291; Mdn1"]
[337,"NC_007418.3",18694567,"SNV","G","A","Heterozygous",12,22,54.55,1,7,5,0.42,39,12,22,6,8,-0.3,0.68,1,"no","A/G","No",1,80.01,"XP_972555.3:c.13150C>T","XP_972555.3:p.Pro4384Ser","LOC661291",661291,null,"661291 [Gene Symbol: LOC661291] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: midasin] [Gene Type: protein-coding]","LOC661291; Mdn1"]
[338,"NC_007418.3",18694623,"SNV","G","C","Heterozygous",10,22,45.45,1,7,3,0.3,38,10,23,7,9,1.19,0.36,0.52,"no","C/G","No",1,78.86,"XP_972555.3:c.13094C>G","XP_972555.3:p.Thr4365Ser","LOC661291",661291,null,"661291 [Gene Symbol: LOC661291] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: midasin] [Gene Type: protein-coding]","LOC661291; Mdn1"]
[339,"NC_007418.3",18888816,"SNV","C","G","Homozygous",21,21,100,1,12,12,0.5,37.14,24,24,12,13,null,1,1,"no","G/G","No",1,83.1,"XP_972302.1:c.609C>G","XP_972302.1:p.Asp203Glu","LOC661019",661019,null,"661019 [Gene Symbol: LOC661019] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: longitudinals lacking protein, isoforms H/M/V] [Gene Type: protein-coding]","LOC661019"]
[340,"NC_007418.3",19297727,"SNV","C","T","Heterozygous",13,24,54.17,1,11,3,0.21,37.69,14,28,7,9,0.43,0.7,1,"no","C/T","No",1,87.34,"XP_970835.1:c.1013C>T","XP_970835.1:p.Pro338Leu","LOC659438",659438,null,"659438 [Gene Symbol: LOC659438] [Locus Tag: TcasGA2_TC011192] [Chromosome: LG3] [Map Location: ] [Description: retinal dehydrogenase 1] [Gene Type: protein-coding]","TcasGA2_TC011192; LOC659438"]
[343,"NC_007418.3",19304812,"SNV","A","T","Heterozygous",15,28,53.57,1,5,11,0.31,35.8,16,29,8,9,0.37,0.38,0.93,"no","A/T","No",1,100.32,"XP_970641.1:c.226A>T","XP_970641.1:p.Thr76Ser","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[344,"NC_007418.3",19304828,"SNV","G","A","Homozygous",25,25,100,1,18,13,0.42,37.16,31,31,16,19,null,1,1,"no","A/A","No",1,96.74,"XP_970641.1:c.242G>A","XP_970641.1:p.Ser81Asn","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[345,"NC_007418.3",19304888,"SNV","C","A","Heterozygous",10,25,40,1,5,5,0.5,38.2,10,26,7,8,-1.11,0.35,0.93,"no","A/C","No",1,66.98,"XP_970641.1:c.302C>A","XP_970641.1:p.Thr101Lys","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[346,"NC_007418.3",19304899,"SNV","C","A","Heterozygous",12,27,44.44,1,5,8,0.38,37.75,13,30,8,9,-0.32,0.69,0.99,"no","A/C","No",1,86.9,"XP_970641.1:c.313C>A","XP_970641.1:p.Leu105Ile","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[348,"NC_007418.3",19308666,"SNV","C","G","Heterozygous",12,21,57.14,1,10,3,0.23,38.25,13,23,7,9,-0.28,0.85,0.97,"no","C/G","No",1,68.88,"XP_008194457.1:c.818C>G","XP_008194457.1:p.Pro273Arg","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[349,"NC_007418.3",19308671,"SNV","G","A","Heterozygous",13,21,61.9,1,11,3,0.21,39.23,14,23,8,10,-0.87,0.85,0.99,"no","A/G","No",1,57.24,"XP_008194457.1:c.823G>A","XP_008194457.1:p.Glu275Lys","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[351,"NC_007418.3",19309701,"SNV","T","C","Heterozygous",17,26,65.38,1,3,14,0.18,37.71,17,26,12,12,-0.4,0.58,0.64,"no","C/T","No",1,54.94,"XP_008194457.1:c.1609T>C","XP_008194457.1:p.Phe537Leu","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[352,"NC_007418.3",19309728,"SNV","G","T","Heterozygous",16,29,55.17,1,3,13,0.19,37.62,16,29,8,12,0.22,0.7,0.46,"no","G/T","No",1,98.42,"XP_008194457.1:c.1636G>T","XP_008194457.1:p.Val546Leu","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[353,"NC_007418.3",19309850,"SNV","C","G","Heterozygous",12,22,54.55,1,6,8,0.43,39,14,26,8,9,-0.73,0.71,1,"no","C/G","No",1,78.85,"XP_008194457.1:c.1758C>G","XP_008194457.1:p.Asn586Lys","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[356,"NC_007418.3","19309863..19309864","MNV","GA","CC","Heterozygous",18,25,72,1,7,14,0.33,38.75,21,30,13,16,0.01,0.88,1,"no","complex","No",1,200,"XP_008194457.1:c.1771_1772delGAinsCC","XP_008194457.1:p.Glu591Pro","LOC103313294",103313294,null,"103313294 [Gene Symbol: LOC103313294] [Locus Tag: TcasGA2_TC011194] [Chromosome: LG3] [Map Location: LG10|LG3] [Description: uncharacterized LOC103313294] [Gene Type: protein-coding]","LOC103313294; TcasGA2_TC011194"]
[358,"NC_007418.3","19917236..19917237","MNV","AT","TC","Homozygous",25,25,100,1,14,11,0.44,38.55,25,25,9,16,null,1,1,"no","TC/TC","No",1,200,"XP_008193899.1:c.[1160_1161delATinsTC]; XP_967203.1:c.[1205_1206delATinsTC]","XP_008193899.1:p.[Tyr387Phe]; XP_967203.1:p.[Tyr402Phe]","LOC655557",655557,null,"655557 [Gene Symbol: LOC655557] [Locus Tag: TcasGA2_TC002133] [Chromosome: LG3] [Map Location: ] [Description: protein arginine N-methyltransferase 7] [Gene Type: protein-coding]","LOC655557; TcasGA2_TC002133"]
[360,"NC_007418.3",20381956,"SNV","A","G","Homozygous",20,20,100,1,16,7,0.3,37.5,23,23,9,13,null,1,1,"no","G/G","No",1,80.09,"XP_008194055.1:c.[706A>G]; XP_008194070.1:c.[746-6744T>C]; XP_015833856.1:c.[746-6744T>C]","XP_008194055.1:p.Asn236Asp","LOC657445, LOC657603","657445 , 657603",null,"657445 [Gene Symbol: LOC657445] [Locus Tag: TcasGA2_TC002113] [Chromosome: LG3] [Map Location: ] [Description: ALK tyrosine kinase receptor] [Gene Type: protein-coding] || 657603 [Gene Symbol: LOC657603] [Locus Tag: TcasGA2_TC002148] [Chromosome: LG3] [Map Location: ] [Description: inactive peptidyl-prolyl cis-trans isomerase shutdown] [Gene Type: protein-coding]","LOC657445; TcasGA2_TC002113 || LOC657603; TcasGA2_TC002148"]
[361,"NC_007418.3",22248538,"SNV","G","A","Homozygous",21,21,100,1,15,6,0.29,37.52,21,21,12,15,null,1,1,"no","A/A","No",1,84.7,"XP_008191352.1:c.[944G>A]; XP_008191351.1:c.[944G>A]","XP_008191352.1:p.[Ser315Asn]; XP_008191351.1:p.[Ser315Asn]","LOC656254",656254,null,"656254 [Gene Symbol: LOC656254] [Locus Tag: TcasGA2_TC003827] [Chromosome: LG3] [Map Location: ] [Description: zinc finger autosomal protein] [Gene Type: protein-coding]","LOC656254; TcasGA2_TC003827"]
[362,"NC_007418.3",23045504,"SNV","G","A","Homozygous",22,22,100,1,17,9,0.35,36.36,26,26,10,15,null,1,1,"no","A/A","No",1,87.71,"XP_015833932.1:c.[3521C>T]; XP_015833933.1:c.[3467C>T]; XP_015833934.1:c.[3521C>T]; XP_015833931.1:c.[3521C>T]; XP_015833935.1:c.[3521C>T]","XP_015833932.1:p.[Ala1174Val]; XP_015833933.1:p.[Ala1156Val]; XP_015833934.1:p.[Ala1174Val]; XP_015833931.1:p.[Ala1174Val]; XP_015833935.1:p.[Ala1174Val]","LOC656419",656419,null,"656419 [Gene Symbol: LOC656419] [Locus Tag: TcasGA2_TC002571] [Chromosome: LG3] [Map Location: ] [Description: protein dopey-1 homolog] [Gene Type: protein-coding]","LOC656419; TcasGA2_TC002571"]
[364,"NC_007418.3",24202996,"SNV","G","A","Heterozygous",10,29,34.48,1,7,6,0.46,39.1,13,37,6,6,0.67,0.49,0.97,"no","A/G","No",1,59.39,"XP_008198962.1:c.[1103-431C>T]; NP_001159495.1:c.[461C>T]","NP_001159495.1:p.Thr154Ile","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[365,"NC_007418.3",24203111,"SNV","C","T","Heterozygous",14,33,42.42,1,2,14,0.12,38.93,16,37,9,10,0.09,0.8,0.93,"no","C/T","No",1,99.04,"XP_008198962.1:c.[1103-546G>A]; NP_001159495.1:c.[346G>A]","NP_001159495.1:p.Gly116Ser","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[368,"NC_007418.3",24203157,"SNV","G","T","Heterozygous",10,24,41.67,1,0,10,0,38.2,10,24,6,8,-1.11,0.27,0.3,"no","G/T","No",1,69.95,"NP_001159495.1:c.[300C>A]; XP_008198962.1:c.[1103-592C>A]","NP_001159495.1:p.Asp100Glu","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[370,"NC_007418.3",25623535,"SNV","C","A","Homozygous",25,25,100,1,10,21,0.32,38.92,31,31,12,14,null,1,1,"no","A/A","No",1,96.73,"XP_008191393.1:c.[5708C>A]; XP_008191391.1:c.[5810C>A]; XP_015834046.1:c.[3178-2165C>A]","XP_008191393.1:p.[Thr1903Lys]; XP_008191391.1:p.[Thr1937Lys]","LOC656175",656175,null,"656175 [Gene Symbol: LOC656175] [Locus Tag: TcasGA2_TC003876] [Chromosome: LG3] [Map Location: ] [Description: chitinase 6] [Gene Type: protein-coding]","LOC656175; TcasGA2_TC003876; GLEAN_03876; Cht6"]
[371,"NC_007418.3",25908694,"SNV","T","C","Homozygous",28,28,100,1,18,14,0.44,37.07,32,32,17,19,null,1,1,"no","C/C","No",1,104.19,"XP_015834034.1:c.925A>G","XP_015834034.1:p.Arg309Gly","LOC656565, LOC657482","656565 , 657482",null,"656565 [Gene Symbol: LOC656565] [Locus Tag: TcasGA2_TC002522] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase Src64B] [Gene Type: protein-coding] || 657482 [Gene Symbol: LOC657482] [Locus Tag: TcasGA2_TC002520] [Chromosome: LG3] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2] [Gene Type: protein-coding]","LOC656565; TcasGA2_TC002522 || TcasGA2_TC002520; LOC657482"]
[372,"NC_007418.3",26454800,"SNV","T","G","Homozygous",25,25,100,1,15,14,0.48,35.72,29,29,12,18,null,1,1,"no","G/G","No",1,95.13,"XP_008191438.1:c.[3490A>C]; XP_015834049.1:c.[3286A>C]; XP_008191437.1:c.[3490A>C]","XP_008191438.1:p.[Asn1164His]; XP_015834049.1:p.[Asn1096His]; XP_008191437.1:p.[Asn1164His]","LOC659451",659451,null,"659451 [Gene Symbol: LOC659451] [Locus Tag: TcasGA2_TC002498] [Chromosome: LG3] [Map Location: ] [Description: dual oxidase] [Gene Type: protein-coding]","TcasGA2_TC002498; LOC659451"]
[374,"NC_007418.3",27826061,"SNV","A","C","Homozygous",21,21,100,1,15,7,0.32,35.52,22,22,10,14,null,1,1,"no","C/C","No",1,80.11,"XP_967329.1:c.259T>G","XP_967329.1:p.Ser87Ala","LOC655674",655674,null,"655674 [Gene Symbol: LOC655674] [Locus Tag: TcasGA2_TC002471] [Chromosome: LG3] [Map Location: ] [Description: sulfhydryl oxidase 2] [Gene Type: protein-coding]","TcasGA2_TC002471; LOC655674"]
[375,"NC_007418.3",27826253,"SNV","T","C","Homozygous",20,20,100,1,14,8,0.36,35.65,22,22,9,14,null,1,1,"no","C/C","No",1,80.11,"XP_967329.1:c.67A>G","XP_967329.1:p.Ile23Val","LOC655674",655674,null,"655674 [Gene Symbol: LOC655674] [Locus Tag: TcasGA2_TC002471] [Chromosome: LG3] [Map Location: ] [Description: sulfhydryl oxidase 2] [Gene Type: protein-coding]","TcasGA2_TC002471; LOC655674"]
[376,"NC_007418.3",27920471,"SNV","G","A","Homozygous",24,24,100,1,17,8,0.32,37.71,25,25,11,12,null,1,1,"no","A/A","No",1,93.73,"XP_015834159.1:c.[692+12695G>A]; XP_015834116.1:c.[692+12695G>A]; XP_015834130.1:c.[692+12695G>A]; XP_015834149.1:c.[692+12695G>A]; XP_015834154.1:c.[692+12695G>A]; XP_015834119.1:c.[693-226G>A]; XP_015834136.1:c.[693-6725G>A]; XP_015834114.1:c.[692+12695G>A]; XP_015834135.1:c.[1453G>A]; XP_015834138.1:c.[692+12695G>A]; XP_015834125.1:c.[692+12695G>A]; XP_015834126.1:c.[692+12695G>A]; XP_015834148.1:c.[692+12695G>A]; XP_015834160.1:c.[692+12695G>A]; XP_015834118.1:c.[693-1503G>A]; XP_015834134.1:c.[692+12695G>A]; XP_015834115.1:c.[692+12695G>A]; XP_015834127.1:c.[692+12695G>A]; XP_015834137.1:c.[692+12695G>A]; XP_015834153.1:c.[692+12695G>A]; XP_015834124.1:c.[692+12695G>A]; XP_015834156.1:c.[692+12695G>A]; XP_015834162.1:c.[692+12695G>A]; XP_015834145.1:c.[692+12695G>A]; XP_015834140.1:c.[692+12695G>A]; XP_015834161.1:c.[692+12695G>A]; XP_015834143.1:c.[692+12695G>A]; XP_015834158.1:c.[693-2996G>A]; XP_015834157.1:c.[692+12695G>A]; XP_015834123.1:c.[692+12695G>A]; XP_015834141.1:c.[693-7818G>A]; XP_015834165.1:c.[693-5805G>A]; XP_015834155.1:c.[693-12344G>A]; XP_015834142.1:c.[692+12695G>A]; XP_015834163.1:c.[692+12695G>A]; XP_015834152.1:c.[692+12695G>A]; XP_015834129.1:c.[692+12695G>A]; XP_015834144.1:c.[692+12695G>A]; XP_015834120.1:c.[693-9753G>A]; XP_015834147.1:c.[692+12695G>A]; XP_015834122.1:c.[692+12695G>A]; XP_015834131.1:c.[692+12695G>A]; XP_015834121.1:c.[692+12695G>A]; XP_015834166.1:c.[692+12695G>A]; XP_015834164.1:c.[693-4800G>A]; XP_015834151.1:c.[692+12695G>A]","XP_015834135.1:p.Glu485Lys","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[377,"NC_007418.3",27925741,"SNV","T","C","Homozygous",20,20,100,1,15,5,0.25,37.95,20,20,12,15,null,1,1,"no","C/C","No",1,80.12,"XP_015834155.1:c.[693-7074T>C]; XP_015834142.1:c.[692+17965T>C]; XP_015834130.1:c.[692+17965T>C]; XP_015834140.1:c.[692+17965T>C]; XP_015834159.1:c.[692+17965T>C]; XP_015834143.1:c.[692+17965T>C]; XP_015834114.1:c.[692+17965T>C]; XP_015834122.1:c.[692+17965T>C]; XP_015834151.1:c.[693-17669T>C]; XP_015834120.1:c.[693-4483T>C]; XP_015834165.1:c.[693-535T>C]; XP_015834154.1:c.[692+17965T>C]; XP_015834157.1:c.[692+17965T>C]; XP_015834147.1:c.[693-9378T>C]; XP_015834138.1:c.[692+17965T>C]; XP_015834152.1:c.[692+17965T>C]; XP_015834166.1:c.[692+17965T>C]; XP_015834134.1:c.[692+17965T>C]; XP_015834121.1:c.[692+17965T>C]; XP_015834125.1:c.[692+17965T>C]; XP_015834163.1:c.[692+17965T>C]; XP_015834156.1:c.[692+17965T>C]; XP_015834141.1:c.[693-2548T>C]; XP_015834136.1:c.[693-1455T>C]; XP_015834127.1:c.[692+17965T>C]; XP_015834116.1:c.[692+17965T>C]; XP_015834137.1:c.[692+17965T>C]; XP_015834126.1:c.[692+17965T>C]; XP_015834161.1:c.[692+17965T>C]; XP_015834131.1:c.[692+17965T>C]; XP_015834124.1:c.[692+17965T>C]; XP_015834115.1:c.[692+17965T>C]; XP_015834123.1:c.[692+17965T>C]; XP_015834148.1:c.[693-14144T>C]; XP_015834160.1:c.[692+17965T>C]; XP_015834162.1:c.[692+17965T>C]; XP_015834149.1:c.[693-9378T>C]; XP_015834164.1:c.[1163T>C]; XP_015834144.1:c.[693-16462T>C]; XP_015834145.1:c.[693-11721T>C]; XP_015834153.1:c.[693-8178T>C]; XP_015834129.1:c.[692+17965T>C]","XP_015834164.1:p.Ile388Thr","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[378,"NC_007418.3",27935842,"SNV","G","A","Homozygous",21,21,100,1,13,11,0.46,39.43,24,24,10,14,null,1,1,"no","A/A","No",1,84.69,"XP_015834154.1:c.[693-27979G>A]; XP_015834114.1:c.[692+28066G>A]; XP_015834161.1:c.[693-23224G>A]; XP_015834123.1:c.[692+28066G>A]; XP_015834145.1:c.[693-1620G>A]; XP_015834142.1:c.[693-10911G>A]; XP_015834147.1:c.[1416G>A]; XP_015834129.1:c.[692+28066G>A]; XP_015834140.1:c.[692+28066G>A]; XP_015834115.1:c.[692+28066G>A]; XP_015834126.1:c.[692+28066G>A]; XP_015834138.1:c.[692+28066G>A]; XP_015834156.1:c.[692+28066G>A]; XP_015834152.1:c.[692+28066G>A]; XP_015834148.1:c.[693-4043G>A]; XP_015834166.1:c.[693-21175G>A]; XP_015834149.1:c.[1377+39G>A]; XP_015834116.1:c.[692+28066G>A]; XP_015834130.1:c.[692+28066G>A]; XP_015834163.1:c.[692+28066G>A]; XP_015834122.1:c.[693-13819G>A]; XP_015834125.1:c.[692+28066G>A]; XP_015834134.1:c.[692+28066G>A]; XP_015834155.1:c.[1410G>A]; XP_015834162.1:c.[692+28066G>A]; XP_015834160.1:c.[693-18848G>A]; XP_015834137.1:c.[692+28066G>A]; XP_015834159.1:c.[693-17758G>A]; XP_015834143.1:c.[692+28066G>A]; XP_015834144.1:c.[693-6361G>A]; XP_015834151.1:c.[693-7568G>A]; XP_015834127.1:c.[692+28066G>A]; XP_015834124.1:c.[692+28066G>A]; XP_015834131.1:c.[692+28066G>A]; XP_015834157.1:c.[692+28066G>A]; XP_015834121.1:c.[692+28066G>A]","XP_015834147.1:p.[Met472Ile]; XP_015834155.1:p.[Met470Ile]","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[379,"NC_007418.3",27977105,"SNV","T","C","Homozygous",22,22,100,1,18,5,0.22,38.18,23,23,12,14,null,1,1,"no","C/C","No",1,86.13,"XP_015834156.1:c.[693-3188T>C]; XP_015834116.1:c.[693-37780T>C]; XP_015834162.1:c.[693-24514T>C]; XP_015834138.1:c.[693-22200T>C]; XP_015834152.1:c.[693-7458T>C]; XP_015834124.1:c.[693-13585T>C]; XP_015834114.1:c.[693-18124T>C]; XP_015834125.1:c.[693-26922T>C]; XP_015834140.1:c.[693-5936T>C]; XP_015834157.1:c.[693-2177T>C]; XP_015834143.1:c.[791T>C]; XP_015834127.1:c.[693-10509T>C]; XP_015834115.1:c.[693-41286T>C]; XP_015834130.1:c.[693-30799T>C]; XP_015834121.1:c.[693-48897T>C]; XP_015834123.1:c.[693-34266T>C]","XP_015834143.1:p.Val264Ala","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[380,"NC_007418.3",27999748,"SNV","C","A","Homozygous",21,21,100,1,1,20,0.05,38.1,21,21,8,10,null,1,1,"no","A/A","No",1,84.69,"XP_015834162.1:c.[693-1871C>A]; XP_015834130.1:c.[693-8156C>A]; XP_015834116.1:c.[693-15137C>A]; XP_015834115.1:c.[693-18643C>A]; XP_015834138.1:c.[1136C>A]; XP_015834125.1:c.[693-4279C>A]; XP_015834121.1:c.[693-26254C>A]; XP_015834123.1:c.[693-11623C>A]","XP_015834138.1:p.Thr379Lys","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[381,"NC_007418.3","28030986..28030987","MNV","CT","GC","Homozygous",26,26,100,1,6,22,0.21,35.77,28,28,11,16,null,1,1,"no","GC/GC","No",1,200,"XP_968354.1:c.2784_2785delAGinsGC","XP_968354.1:p.Ala929Pro","LOC656754",656754,null,"656754 [Gene Symbol: LOC656754] [Locus Tag: TcasGA2_TC002467] [Chromosome: LG3] [Map Location: ] [Description: lysosomal alpha-mannosidase] [Gene Type: protein-coding]","LOC656754; TcasGA2_TC002467"]
[382,"NC_007418.3",28031943,"SNV","T","C","Homozygous",24,24,100,1,11,15,0.42,38.67,26,26,18,20,null,1,1,"no","C/C","No",1,92.15,"XP_968354.1:c.1966A>G","XP_968354.1:p.Asn656Asp","LOC656754",656754,null,"656754 [Gene Symbol: LOC656754] [Locus Tag: TcasGA2_TC002467] [Chromosome: LG3] [Map Location: ] [Description: lysosomal alpha-mannosidase] [Gene Type: protein-coding]","LOC656754; TcasGA2_TC002467"]
[383,"NC_007418.3",28054367,"SNV","T","C","Homozygous",23,23,100,1,17,15,0.47,38.65,32,32,14,14,null,1,1,"no","C/C","No",1,89.14,"XP_968596.1:c.1559A>G","XP_968596.1:p.Asn520Ser","LOC657014",657014,null,"657014 [Gene Symbol: LOC657014] [Locus Tag: TcasGA2_TC002464] [Chromosome: LG3] [Map Location: ] [Description: lysosomal alpha-mannosidase] [Gene Type: protein-coding]","TcasGA2_TC002464; LOC657014"]
[385,"NC_007418.3",28186092,"SNV","C","T","Homozygous",25,25,100,1,7,21,0.25,37.36,28,28,15,18,null,1,1,"no","T/T","No",1,96.74,"XP_015834179.1:c.[18011C>T]; XP_015834176.1:c.[18128C>T]; XP_008200060.1:c.[17984C>T]; XP_015834180.1:c.[14672C>T]; XP_015834177.1:c.[18110C>T]; XP_015834173.1:c.[18494C>T]; XP_015834181.1:c.[9992C>T]; XP_015834170.1:c.[18584C>T]; XP_015834175.1:c.[18134C>T]; XP_015834178.1:c.[18101C>T]; XP_015834172.1:c.[18557C>T]; XP_015834171.1:c.[18566C>T]; XP_015834174.1:c.[18491C>T]","XP_015834179.1:p.[Pro6004Leu]; XP_015834176.1:p.[Pro6043Leu]; XP_008200060.1:p.[Pro5995Leu]; XP_015834180.1:p.[Pro4891Leu]; XP_015834177.1:p.[Pro6037Leu]; XP_015834173.1:p.[Pro6165Leu]; XP_015834181.1:p.[Pro3331Leu]; XP_015834170.1:p.[Pro6195Leu]; XP_015834175.1:p.[Pro6045Leu]; XP_015834178.1:p.[Pro6034Leu]; XP_015834172.1:p.[Pro6186Leu]; XP_015834171.1:p.[Pro6189Leu]; XP_015834174.1:p.[Pro6164Leu]","LOC100142605",100142605,null,"100142605 [Gene Symbol: LOC100142605] [Locus Tag: TcasGA2_TC003960] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: ankyrin-3] [Gene Type: protein-coding]","TcasGA2_TC003960; LOC100142605"]
[387,"NC_007418.3",28755662,"SNV","A","T","Heterozygous",10,24,41.67,1,8,2,0.2,38.1,10,24,3,6,-1.79,0.32,0.94,"no","A/T","No",1,73.43,"XP_008191502.1:c.654A>T","XP_008191502.1:p.Gln218His","LOC661541",661541,null,"661541 [Gene Symbol: LOC661541] [Locus Tag: TcasGA2_TC002423] [Chromosome: LG3] [Map Location: ] [Description: brefeldin A-inhibited guanine nucleotide-exchange protein 1] [Gene Type: protein-coding]","LOC661541; TcasGA2_TC002423"]
[389,"NC_007418.3",28791926,"SNV","G","A","Homozygous",22,22,100,1,13,14,0.48,38.86,27,27,13,14,null,1,1,"no","A/A","No",1,87.7,"XP_966589.1:c.1460G>A","XP_966589.1:p.Gly487Glu","LOC659553",659553,null,"659553 [Gene Symbol: LOC659553] [Locus Tag: TcasGA2_TC002426] [Chromosome: LG3] [Map Location: ] [Description: kelch domain-containing protein 4] [Gene Type: protein-coding]","LOC659553; TcasGA2_TC002426"]
[390,"NC_007418.3",28932375,"SNV","T","C","Homozygous",20,20,100,1,15,8,0.35,37.7,23,23,13,13,null,1,1,"no","C/C","No",1,80.12,"XP_015834218.1:c.640T>C","XP_015834218.1:p.Tyr214His","LOC107397694",107397694,null,"107397694 [Gene Symbol: LOC107397694] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397694] [Gene Type: protein-coding]","LOC107397694"]
[391,"NC_007418.3","29019974..29019975","MNV","GA","AG","Homozygous",25,25,100,1,16,16,0.5,38.64,32,32,15,19,null,1,1,"no","AG/AG","No",1,200,"XP_015834201.1:c.[38274_38275delTCinsCT]; XP_015834202.1:c.[36304+2330_36304+2331delTCinsCT]; XP_015834190.1:c.[38169_38170delTCinsCT]; XP_015834196.1:c.[30867_30868delTCinsCT]; XP_015834189.1:c.[38262_38263delTCinsCT]; XP_015834192.1:c.[38274_38275delTCinsCT]; XP_015834195.1:c.[35658_35659delTCinsCT]; XP_015834200.1:c.[26844_26845delTCinsCT]; XP_015834197.1:c.[36304+2330_36304+2331delTCinsCT]; XP_015834191.1:c.[37914_37915delTCinsCT]; XP_015834194.1:c.[38274_38275delTCinsCT]; XP_015834199.1:c.[26862_26863delTCinsCT]; XP_015834198.1:c.[38274_38275delTCinsCT]","XP_015834201.1:p.[His12759Tyr]; XP_015834190.1:p.[His12724Tyr]; XP_015834196.1:p.[His10290Tyr]; XP_015834189.1:p.[His12755Tyr]; XP_015834192.1:p.[His12759Tyr]; XP_015834195.1:p.[His11887Tyr]; XP_015834200.1:p.[His8949Tyr]; XP_015834191.1:p.[His12639Tyr]; XP_015834194.1:p.[His12759Tyr]; XP_015834199.1:p.[His8955Tyr]; XP_015834198.1:p.[His12759Tyr]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[392,"NC_007418.3",29020060,"SNV","A","G","Homozygous",29,29,100,1,14,19,0.42,38.9,33,33,8,15,null,1,1,"no","G/G","No",1,107.18,"XP_015834202.1:c.[36304+2245T>C]; XP_015834189.1:c.[38177T>C]; XP_015834199.1:c.[26777T>C]; XP_015834192.1:c.[38189T>C]; XP_015834201.1:c.[38189T>C]; XP_015834198.1:c.[38189T>C]; XP_015834197.1:c.[36304+2245T>C]; XP_015834194.1:c.[38189T>C]; XP_015834195.1:c.[35573T>C]; XP_015834200.1:c.[26759T>C]; XP_015834196.1:c.[30782T>C]; XP_015834190.1:c.[38084T>C]; XP_015834191.1:c.[37829T>C]","XP_015834189.1:p.[Ile12726Thr]; XP_015834199.1:p.[Ile8926Thr]; XP_015834192.1:p.[Ile12730Thr]; XP_015834201.1:p.[Ile12730Thr]; XP_015834198.1:p.[Ile12730Thr]; XP_015834194.1:p.[Ile12730Thr]; XP_015834195.1:p.[Ile11858Thr]; XP_015834200.1:p.[Ile8920Thr]; XP_015834196.1:p.[Ile10261Thr]; XP_015834190.1:p.[Ile12695Thr]; XP_015834191.1:p.[Ile12610Thr]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[393,"NC_007418.3",29021848,"SNV","A","G","Homozygous",21,21,100,1,15,10,0.4,38,25,25,12,17,null,1,1,"no","G/G","No",1,83.1,"XP_015834199.1:c.[24989T>C]; XP_015834194.1:c.[36401T>C]; XP_015834197.1:c.[36304+457T>C]; XP_015834195.1:c.[33785T>C]; XP_015834202.1:c.[36304+457T>C]; XP_015834201.1:c.[36401T>C]; XP_015834189.1:c.[36389T>C]; XP_015834192.1:c.[36401T>C]; XP_015834191.1:c.[36041T>C]; XP_015834190.1:c.[36296T>C]; XP_015834196.1:c.[28994T>C]; XP_015834200.1:c.[24971T>C]; XP_015834198.1:c.[36401T>C]","XP_015834199.1:p.[Leu8330Pro]; XP_015834194.1:p.[Leu12134Pro]; XP_015834195.1:p.[Leu11262Pro]; XP_015834201.1:p.[Leu12134Pro]; XP_015834189.1:p.[Leu12130Pro]; XP_015834192.1:p.[Leu12134Pro]; XP_015834191.1:p.[Leu12014Pro]; XP_015834190.1:p.[Leu12099Pro]; XP_015834196.1:p.[Leu9665Pro]; XP_015834200.1:p.[Leu8324Pro]; XP_015834198.1:p.[Leu12134Pro]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[394,"NC_007418.3",29031006,"SNV","A","T","Homozygous",20,20,100,1,10,13,0.43,38.5,23,23,15,15,null,1,1,"no","T/T","No",1,81.7,"XP_015834195.1:c.[26522T>A]; XP_015834200.1:c.[17708T>A]; XP_015834192.1:c.[29138T>A]; XP_015834191.1:c.[28778T>A]; XP_015834201.1:c.[29138T>A]; XP_015834202.1:c.[29138T>A]; XP_015834196.1:c.[25838-4239T>A]; XP_015834197.1:c.[29138T>A]; XP_015834198.1:c.[29138T>A]; XP_015834189.1:c.[29126T>A]; XP_015834199.1:c.[17726T>A]; XP_015834190.1:c.[29033T>A]; XP_015834194.1:c.[29138T>A]","XP_015834195.1:p.[Met8841Lys]; XP_015834200.1:p.[Met5903Lys]; XP_015834192.1:p.[Met9713Lys]; XP_015834191.1:p.[Met9593Lys]; XP_015834201.1:p.[Met9713Lys]; XP_015834202.1:p.[Met9713Lys]; XP_015834197.1:p.[Met9713Lys]; XP_015834198.1:p.[Met9713Lys]; XP_015834189.1:p.[Met9709Lys]; XP_015834199.1:p.[Met5909Lys]; XP_015834190.1:p.[Met9678Lys]; XP_015834194.1:p.[Met9713Lys]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[395,"NC_007418.3",29033304,"SNV","A","T","Homozygous",27,27,100,1,11,17,0.39,37.81,28,28,17,22,null,1,1,"no","T/T","No",1,102.75,"XP_015834192.1:c.[26840T>A]; XP_015834198.1:c.[26840T>A]; XP_015834202.1:c.[26840T>A]; XP_015834197.1:c.[26840T>A]; XP_015834190.1:c.[26735T>A]; XP_015834195.1:c.[24224T>A]; XP_015834194.1:c.[26840T>A]; XP_015834191.1:c.[26480T>A]; XP_015834201.1:c.[26840T>A]; XP_015834196.1:c.[25837+2436T>A]; XP_015834199.1:c.[15428T>A]; XP_015834200.1:c.[15410T>A]; XP_015834189.1:c.[26828T>A]","XP_015834192.1:p.[Ile8947Lys]; XP_015834198.1:p.[Ile8947Lys]; XP_015834202.1:p.[Ile8947Lys]; XP_015834197.1:p.[Ile8947Lys]; XP_015834190.1:p.[Ile8912Lys]; XP_015834195.1:p.[Ile8075Lys]; XP_015834194.1:p.[Ile8947Lys]; XP_015834191.1:p.[Ile8827Lys]; XP_015834201.1:p.[Ile8947Lys]; XP_015834199.1:p.[Ile5143Lys]; XP_015834200.1:p.[Ile5137Lys]; XP_015834189.1:p.[Ile8943Lys]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[396,"NC_007418.3",29038043,"SNV","C","T","Homozygous",22,22,100,1,8,18,0.31,37.09,26,26,12,15,null,1,1,"no","T/T","No",1,87.71,"XP_015834202.1:c.[25129G>A]; XP_015834189.1:c.[25117G>A]; XP_015834192.1:c.[25129G>A]; XP_015834190.1:c.[25024G>A]; XP_015834198.1:c.[25129G>A]; XP_015834191.1:c.[24769G>A]; XP_015834196.1:c.[25129G>A]; XP_015834199.1:c.[13717G>A]; XP_015834201.1:c.[25129G>A]; XP_015834195.1:c.[22513G>A]; XP_015834197.1:c.[25129G>A]; XP_015834200.1:c.[13699G>A]; XP_015834194.1:c.[25129G>A]","XP_015834202.1:p.[Val8377Ile]; XP_015834189.1:p.[Val8373Ile]; XP_015834192.1:p.[Val8377Ile]; XP_015834190.1:p.[Val8342Ile]; XP_015834198.1:p.[Val8377Ile]; XP_015834191.1:p.[Val8257Ile]; XP_015834196.1:p.[Val8377Ile]; XP_015834199.1:p.[Val4573Ile]; XP_015834201.1:p.[Val8377Ile]; XP_015834195.1:p.[Val7505Ile]; XP_015834197.1:p.[Val8377Ile]; XP_015834200.1:p.[Val4567Ile]; XP_015834194.1:p.[Val8377Ile]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[397,"NC_007418.3",29072371,"SNV","A","T","Homozygous",24,24,100,1,16,9,0.36,37.67,25,25,14,17,null,1,1,"no","T/T","No",1,93.73,"XP_015834190.1:c.[4867T>A]; XP_015834197.1:c.[4867T>A]; XP_015834202.1:c.[4867T>A]; XP_015834195.1:c.[2251T>A]; XP_015834192.1:c.[4867T>A]; XP_015834191.1:c.[4867T>A]; XP_015834196.1:c.[4867T>A]; XP_015834189.1:c.[4855T>A]; XP_015834194.1:c.[4867T>A]; XP_015834201.1:c.[4867T>A]; XP_015834198.1:c.[4867T>A]","XP_015834190.1:p.[Cys1623Ser]; XP_015834197.1:p.[Cys1623Ser]; XP_015834202.1:p.[Cys1623Ser]; XP_015834195.1:p.[Cys751Ser]; XP_015834192.1:p.[Cys1623Ser]; XP_015834191.1:p.[Cys1623Ser]; XP_015834196.1:p.[Cys1623Ser]; XP_015834189.1:p.[Cys1619Ser]; XP_015834194.1:p.[Cys1623Ser]; XP_015834201.1:p.[Cys1623Ser]; XP_015834198.1:p.[Cys1623Ser]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[403,"NC_007418.3",29942396,"SNV","T","G","Homozygous",21,21,100,1,14,14,0.5,36.86,28,28,11,16,null,1,1,"no","G/G","No",1,80.09,"XP_969398.1:c.718A>C","XP_969398.1:p.Ser240Arg","LOC657875",657875,null,"657875 [Gene Symbol: LOC657875] [Locus Tag: TcasGA2_TC003965] [Chromosome: LG3] [Map Location: ] [Description: cyclic GMP-AMP synthase] [Gene Type: protein-coding]","TcasGA2_TC003965; LOC657875"]
[405,"NC_007418.3","30486768..30486769","MNV","GG","AC","Homozygous",24,24,100,1,10,18,0.36,37.98,28,28,15,15,null,1,1,"no","AC/AC","No",1,200,"XP_015834268.1:c.7607_7608delCCinsGT","XP_015834268.1:p.Thr2536Ser","LOC100141546",100141546,null,"100141546 [Gene Symbol: LOC100141546] [Locus Tag: TcasGA2_TC002408] [Chromosome: LG3] [Map Location: ] [Description: protein-methionine sulfoxide oxidase Mical] [Gene Type: protein-coding]","LOC100141546; TcasGA2_TC002408"]
[407,"NC_007418.3",30634024,"SNV","T","C","Heterozygous",15,24,62.5,1,3,12,0.2,38.53,15,24,8,7,0.86,0.65,0.99,"no","C/T","No",1,60.48,"XP_015834277.1:c.[340A>G]; XP_015834276.1:c.[340A>G]","XP_015834277.1:p.[Thr114Ala]; XP_015834276.1:p.[Thr114Ala]","LOC103313919",103313919,null,"103313919 [Gene Symbol: LOC103313919] [Locus Tag: TcasGA2_TC032689] [Chromosome: LG3] [Map Location: ] [Description: E3 ubiquitin-protein ligase LRSAM1-like] [Gene Type: protein-coding]","TcasGA2_TC032689; LOC103313919"]
[408,"NC_007418.3",31255383,"SNV","A","G","Homozygous",22,22,100,1,10,14,0.42,37.36,24,24,12,15,null,1,1,"no","G/G","No",1,86.1,"XP_968597.1:c.955A>G","XP_968597.1:p.Lys319Glu","LOC657015",657015,null,"657015 [Gene Symbol: LOC657015] [Locus Tag: TcasGA2_TC004027] [Chromosome: LG3] [Map Location: ] [Description: carboxypeptidase A] [Gene Type: protein-coding]","LOC657015; TcasGA2_TC004027"]
[412,"NC_007419.2",894632,"SNV","A","G","Homozygous",21,21,100,1,8,16,0.33,36.9,24,24,11,12,null,1,1,"no","G/G","No",1,83.1,"XP_001813892.1:c.1421A>G","XP_001813892.1:p.Lys474Arg","LOC100141870",100141870,null,"100141870 [Gene Symbol: LOC100141870] [Locus Tag: TcasGA2_TC007806] [Chromosome: LG4] [Map Location: ] [Description: location of vulva defective 1] [Gene Type: protein-coding]","TcasGA2_TC007806; LOC100141870"]
[413,"NC_007419.2",907666,"SNV","G","T","Homozygous",22,22,100,1,5,21,0.19,36.86,26,26,14,14,null,1,1,"no","T/T","No",1,87.71,"XP_015834365.1:c.[3108+411G>T]; XP_008191674.1:c.[484C>A]; XP_008191675.1:c.[3087+411G>T]; XP_015834364.1:c.[3108+411G>T]","XP_008191674.1:p.Pro162Thr","LOC663146, LOC103312551","663146 , 103312551",null,"663146 [Gene Symbol: LOC663146] [Locus Tag: TcasGA2_TC007807] [Chromosome: LG4] [Map Location: ] [Description: cilia- and flagella-associated protein 44] [Gene Type: protein-coding] || 103312551 [Gene Symbol: LOC103312551] [Locus Tag: TcasGA2_TC007686] [Chromosome: LG4] [Map Location: ] [Description: proteasome inhibitor PI31 subunit] [Gene Type: protein-coding]","LOC663146; TcasGA2_TC007807 || TcasGA2_TC007686; LOC103312551"]
[414,"NC_007419.2",1394432,"SNV","G","A","Heterozygous",13,24,54.17,1,0,13,0,39.46,13,26,6,7,2.35,0.08,0.18,"no","A/G","No",1,87.19,"XP_966637.1:c.1081G>A","XP_966637.1:p.Val361Ile","LOC655049",655049,null,"655049 [Gene Symbol: LOC655049] [Locus Tag: TcasGA2_TC007846] [Chromosome: LG4] [Map Location: ] [Description: rab proteins geranylgeranyltransferase component A 1] [Gene Type: protein-coding]","LOC655049; TcasGA2_TC007846"]
[415,"NC_007419.2",1593010,"SNV","A","T","Heterozygous",9,21,42.86,1,2,7,0.22,39.78,9,21,3,4,2.81,0.1,0.44,"no","A/T","No",1,69.02,"XP_968050.1:c.[747-442A>T]; XP_008191777.1:c.[224T>A]","XP_008191777.1:p.Ile75Asn","LOC656424, LOC103312582","656424 , 103312582",null,"656424 [Gene Symbol: LOC656424] [Locus Tag: TcasGA2_TC007854] [Chromosome: LG4] [Map Location: ] [Description: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase] [Gene Type: protein-coding] || 103312582 [Gene Symbol: LOC103312582] [Locus Tag: TcasGA2_TC007649] [Chromosome: LG4] [Map Location: ] [Description: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase] [Gene Type: protein-coding]","LOC656424; TcasGA2_TC007854 || TcasGA2_TC007649; LOC103312582"]
[416,"NC_007419.2",1653656,"SNV","C","T","Homozygous",25,25,100,1,14,13,0.48,38.76,27,27,13,16,null,1,1,"no","T/T","No",1,96.74,"XP_015834948.1:c.[355G>A]; XP_015834949.1:c.[355G>A]","XP_015834948.1:p.[Gly119Ser]; XP_015834949.1:p.[Gly119Ser]","LOC656845",656845,null,"656845 [Gene Symbol: LOC656845] [Locus Tag: TcasGA2_TC007645] [Chromosome: LG4] [Map Location: ] [Description: nubbin] [Gene Type: protein-coding]","Nub; TcasGA2_TC007645; LOC656845"]
[417,"NC_007419.2",1758481,"SNV","A","C","Heterozygous",10,22,45.45,1,8,2,0.2,37,10,22,4,7,1.32,0.29,0.4,"no","A/C","No",1,79.73,"XP_968671.1:c.1139A>C","XP_968671.1:p.Lys380Thr","LOC657098",657098,null,"657098 [Gene Symbol: LOC657098] [Locus Tag: TcasGA2_TC007859] [Chromosome: LG4] [Map Location: ] [Description: ribonucleoside-diphosphate reductase large subunit] [Gene Type: protein-coding]","LOC657098; TcasGA2_TC007859"]
[418,"NC_007419.2",1847861,"SNV","G","A","Homozygous",21,21,100,1,13,13,0.5,37.38,26,26,13,15,null,1,1,"no","A/A","No",1,84.7,"XP_008191785.1:c.[583G>A]; XP_015834666.1:c.[82-20503G>A]","XP_008191785.1:p.Gly195Ser","LOC107397771, LOC658116","107397771 , 658116",null,"107397771 [Gene Symbol: LOC107397771] [Locus Tag: TcasGA2_TC007866] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397771] [Gene Type: protein-coding] || 658116 [Gene Symbol: LOC658116] [Locus Tag: TcasGA2_TC007865] [Chromosome: LG4] [Map Location: ] [Description: thioredoxin reductase 1, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC007866; LOC107397771 || TcasGA2_TC007865; LOC658116"]
[419,"NC_007419.2",1868389,"SNV","G","T","Homozygous",20,20,100,1,13,13,0.5,36.35,26,26,13,15,null,1,1,"no","T/T","No",1,81.7,"XP_015834661.1:c.[1676-2453C>A]; XP_015834666.1:c.[107G>T]; XP_015834662.1:c.[1649-2453C>A]; XP_008191786.1:c.[1682-2453C>A]","XP_015834666.1:p.Cys36Phe","LOC107397771, LOC652934","107397771 , 652934",null,"107397771 [Gene Symbol: LOC107397771] [Locus Tag: TcasGA2_TC007866] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397771] [Gene Type: protein-coding] || 652934 [Gene Symbol: LOC652934] [Locus Tag: TcasGA2_TC007637] [Chromosome: LG4] [Map Location: ] [Description: dachshund homolog 1] [Gene Type: protein-coding]","TcasGA2_TC007866; LOC107397771 || TcasGA2_TC007637; Dac; LOC652934"]
[420,"NC_007419.2",1994427,"SNV","T","G","Homozygous",20,20,100,1,11,10,0.48,38.15,21,21,14,13,null,1,1,"no","G/G","No",1,80.09,"XP_008191746.2:c.669A>C","XP_008191746.2:p.Lys223Asn","LOC100142257",100142257,null,"100142257 [Gene Symbol: LOC100142257] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: UDP-glucuronosyltransferase 2B15-like] [Gene Type: protein-coding]","LOC100142257"]
[421,"NC_007419.2",2012618,"SNV","A","T","Heterozygous",13,24,54.17,1,2,12,0.14,38.69,14,28,6,8,1.59,0.63,0.39,"no","A/T","No",1,86.03,"XP_970655.1:c.17T>A","XP_970655.1:p.Leu6His","LOC659237",659237,null,"659237 [Gene Symbol: LOC659237] [Locus Tag: TcasGA2_TC007629] [Chromosome: LG4] [Map Location: ] [Description: peroxisomal membrane protein PEX16] [Gene Type: protein-coding]","TcasGA2_TC007629; LOC659237"]
[422,"NC_007419.2",2035093,"SNV","G","T","Heterozygous",9,20,45,1,1,9,0.1,35.89,10,26,3,4,-0.8,0.3,0.78,"no","G/T","No",1,68.38,"XP_971019.1:c.3267G>T","XP_971019.1:p.Leu1089Phe","LOC659640",659640,null,"659640 [Gene Symbol: LOC659640] [Locus Tag: TcasGA2_TC007876] [Chromosome: LG4] [Map Location: ] [Description: ectopic P granules protein 5 homolog] [Gene Type: protein-coding]","TcasGA2_TC007876; LOC659640"]
[424,"NC_007419.2",2092836,"SNV","A","G","Heterozygous",10,22,45.45,1,8,3,0.27,37.6,11,23,6,6,0.53,0.85,0.98,"no","A/G","No",1,79.89,"XP_971084.2:c.13048A>G","XP_971084.2:p.Asn4350Asp","LOC659713",659713,null,"659713 [Gene Symbol: LOC659713] [Locus Tag: TcasGA2_TC007877] [Chromosome: LG4] [Map Location: ] [Description: cadherin-related tumor suppressor] [Gene Type: protein-coding]","LOC659713; TcasGA2_TC007877; FAT; ft"]
[426,"NC_007419.2",2104659,"SNV","A","G","Homozygous",20,20,100,1,12,14,0.46,37.8,26,26,12,14,null,1,1,"no","G/G","No",1,80.1,"XP_008191808.1:c.[910T>C]; XP_015835048.1:c.[385T>C]","XP_008191808.1:p.[Ser304Pro]; XP_015835048.1:p.[Ser129Pro]","LOC103312590",103312590,null,"103312590 [Gene Symbol: LOC103312590] [Locus Tag: TcasGA2_TC007624] [Chromosome: LG4] [Map Location: ] [Description: leucine-rich repeat protein soc-2 homolog] [Gene Type: protein-coding]","TcasGA2_TC007624; LOC103312590"]
[427,"NC_007419.2","2281929..2281930","MNV","GT","AC","Heterozygous",16,30,53.33,1,9,9,0.5,37.65,18,33,10,14,1.57,0.94,0.98,"no","complex","No",1,200,"XP_015834320.1:c.3413_3414delACinsGT","XP_015834320.1:p.Asn1138Ser","LOC660708",660708,null,"660708 [Gene Symbol: LOC660708] [Locus Tag: TcasGA2_TC007612] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC660708] [Gene Type: protein-coding]","TcasGA2_TC007612; LOC660708"]
[428,"NC_007419.2",2290112,"SNV","A","G","Heterozygous",14,23,60.87,1,8,9,0.47,38.21,17,26,9,9,2.93,1,1,"no","A/G","No",1,63.37,"XP_015834320.1:c.1187T>C","XP_015834320.1:p.Val396Ala","LOC660708",660708,null,"660708 [Gene Symbol: LOC660708] [Locus Tag: TcasGA2_TC007612] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC660708] [Gene Type: protein-coding]","TcasGA2_TC007612; LOC660708"]
[429,"NC_007419.2",2375809,"SNV","A","G","Homozygous",25,25,100,1,18,13,0.42,35.92,31,31,14,16,null,1,1,"no","G/G","No",1,95.14,"XP_001812942.1:c.377A>G","XP_001812942.1:p.Glu126Gly","LOC100141771",100141771,null,"100141771 [Gene Symbol: LOC100141771] [Locus Tag: TcasGA2_TC007896] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100141771] [Gene Type: protein-coding]","TcasGA2_TC007896; LOC100141771"]
[432,"NC_007419.2",2852912,"SNV","G","T","Heterozygous",14,22,63.64,1,9,7,0.44,38.29,16,26,6,9,0.61,0.64,1,"no","G/T","No",1,54.03,"XP_974038.1:c.576C>A","XP_974038.1:p.Asn192Lys","LOC662870",662870,null,"662870 [Gene Symbol: LOC662870] [Locus Tag: TcasGA2_TC007575] [Chromosome: LG4] [Map Location: ] [Description: mediator of RNA polymerase II transcription subunit 7] [Gene Type: protein-coding]","LOC662870; TcasGA2_TC007575"]
[433,"NC_007419.2",3011470,"SNV","C","G","Homozygous",20,20,100,1,12,11,0.48,39.05,23,23,12,12,null,1,1,"no","G/G","No",1,80.09,"XP_015834308.1:c.[2674G>C]; NP_001164308.1:c.[2674G>C]; XP_008191737.1:c.[2674G>C]; XP_008191735.1:c.[2674G>C]","XP_015834308.1:p.[Val892Leu]; NP_001164308.1:p.[Val892Leu]; XP_008191737.1:p.[Val892Leu]; XP_008191735.1:p.[Val892Leu]","pain",663508,"painless","663508 [Gene Symbol: pain] [Locus Tag: TcasGA2_TC007561] [Chromosome: LG4] [Map Location: ] [Description: painless] [Gene Type: protein-coding]","GLEAN_07561; pain; TcasGA2_TC007561"]
[434,"NC_007419.2",3032474,"SNV","C","T","Homozygous",22,22,100,1,16,7,0.3,38.77,23,23,12,17,null,1,1,"no","T/T","No",1,87.71,"XP_008191884.2:c.1244G>A","XP_008191884.2:p.Ser415Asn","LOC100142051",100142051,null,"100142051 [Gene Symbol: LOC100142051] [Locus Tag: TcasGA2_TC007557] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142051] [Gene Type: protein-coding]","TcasGA2_TC007557; LOC100142051"]
[435,"NC_007419.2",3032717,"SNV","G","C","Heterozygous",12,25,48,1,4,11,0.27,38.75,15,28,5,4,1.41,0.56,0.74,"no","C/G","No",1,95.85,"XP_008191884.2:c.1001C>G","XP_008191884.2:p.Ser334Cys","LOC100142051",100142051,null,"100142051 [Gene Symbol: LOC100142051] [Locus Tag: TcasGA2_TC007557] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142051] [Gene Type: protein-coding]","TcasGA2_TC007557; LOC100142051"]
[436,"NC_007419.2",3118591,"SNV","C","T","Heterozygous",36,50,72,1,20,21,0.49,38.75,41,59,23,25,0.77,0.87,1,"no","C/T","No",1,53.27,"XP_015834408.1:c.[255+28408C>T]; XP_008191906.2:c.[1579G>A]; XP_015834402.1:c.[1579G>A]; XP_015834403.1:c.[1231G>A]; XP_015834405.1:c.[1579G>A]; XP_015834404.1:c.[1018G>A]; XP_015834407.1:c.[603+28408C>T]; XP_008191893.1:c.[606+28408C>T]; XP_008191896.1:c.[525+28408C>T]; XP_015834401.1:c.[1579G>A]; XP_008191895.1:c.[273+28408C>T]; XP_015834409.1:c.[255+28408C>T]","XP_008191906.2:p.[Val527Ile]; XP_015834402.1:p.[Val527Ile]; XP_015834403.1:p.[Val411Ile]; XP_015834405.1:p.[Val527Ile]; XP_015834404.1:p.[Val340Ile]; XP_015834401.1:p.[Val527Ile]","LOC100141693, LOC100141568","100141693 , 100141568",null,"100141693 [Gene Symbol: LOC100141693] [Locus Tag: TcasGA2_TC007950] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100141693] [Gene Type: protein-coding] || 100141568 [Gene Symbol: LOC100141568] [Locus Tag: TcasGA2_TC007546] [Chromosome: LG4] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 17.6] [Gene Type: protein-coding]","LOC100141693; TcasGA2_TC007950 || TcasGA2_TC007546; LOC100141568"]
[439,"NC_007419.2",3220471,"SNV","A","G","Homozygous",20,20,100,1,15,8,0.35,39.8,23,23,12,15,null,1,1,"no","G/G","No",1,80.09,"XP_976472.1:c.484A>G","XP_976472.1:p.Asn162Asp","LOC664065",664065,null,"664065 [Gene Symbol: LOC664065] [Locus Tag: TcasGA2_TC007962] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC664065] [Gene Type: protein-coding]","LOC664065; TcasGA2_TC007962"]
[440,"NC_007419.2",3220482,"SNV","G","C","Homozygous",20,20,100,1,15,8,0.35,39.2,23,23,12,15,null,1,1,"no","C/C","No",1,80.11,"XP_976472.1:c.495G>C","XP_976472.1:p.Glu165Asp","LOC664065",664065,null,"664065 [Gene Symbol: LOC664065] [Locus Tag: TcasGA2_TC007962] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC664065] [Gene Type: protein-coding]","LOC664065; TcasGA2_TC007962"]
[442,"NC_007419.2",3221037,"SNV","C","A","Homozygous",22,22,100,1,12,15,0.44,38.95,27,27,12,15,null,1,1,"no","A/A","No",1,87.7,"XP_015835101.1:c.[281C>A]; XP_015835102.1:c.[281C>A]","XP_015835101.1:p.[Ala94Glu]; XP_015835102.1:p.[Ala94Glu]","LOC103312576",103312576,null,"103312576 [Gene Symbol: LOC103312576] [Locus Tag: TcasGA2_TC030133] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312576] [Gene Type: protein-coding]","LOC103312576; TcGr36; TcGr34; TcasGA2_TC030133"]
[444,"NC_007419.2",3247346,"SNV","T","A","Heterozygous",12,28,42.86,1,4,8,0.33,35.5,12,30,5,6,-0.97,0.71,0.94,"no","A/T","No",1,87.62,"XP_008191923.1:c.1628T>A","XP_008191923.1:p.Phe543Tyr","LOC664109",664109,null,"664109 [Gene Symbol: LOC664109] [Locus Tag: TcasGA2_TC007966] [Chromosome: LG4] [Map Location: ] [Description: arylsulfatase B] [Gene Type: protein-coding]","TcasGA2_TC007966; LOC664109"]
[445,"NC_007419.2","3292772..3292773","Deletion","CC","-","Homozygous",27,27,100,1,16,15,0.48,36.22,31,31,19,22,null,1,1,"no","-/-","No",1,200,"XP_008191926.1:c.30_31delCC","XP_008191926.1:p.Leu13fs","LOC664156",664156,null,"664156 [Gene Symbol: LOC664156] [Locus Tag: TcasGA2_TC007970] [Chromosome: LG4] [Map Location: ] [Description: protein angel] [Gene Type: protein-coding]","TcasGA2_TC007970; LOC664156"]
[447,"NC_007419.2",3314698,"SNV","A","G","Heterozygous",9,21,42.86,1,4,8,0.33,39.89,12,30,8,8,1.42,0.57,0.94,"no","A/G","No",1,70.02,"XP_975322.1:c.[383-193A>G]; XP_015834458.1:c.[1138A>G]","XP_015834458.1:p.Lys380Glu","LOC664217, LOC103312569","664217 , 103312569",null,"664217 [Gene Symbol: LOC664217] [Locus Tag: TcasGA2_TC007974] [Chromosome: LG4] [Map Location: ] [Description: syntaxin-5] [Gene Type: protein-coding] || 103312569 [Gene Symbol: LOC103312569] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312569] [Gene Type: protein-coding]","LOC664217; TcasGA2_TC007974 || LOC103312569"]
[449,"NC_007419.2",3413453,"SNV","G","A","Homozygous",24,24,100,1,6,18,0.25,37.38,24,24,13,14,null,1,1,"no","A/A","No",1,93.72,"XP_975378.1:c.394G>A","XP_975378.1:p.Val132Ile","LOC664277",664277,null,"664277 [Gene Symbol: LOC664277] [Locus Tag: TcasGA2_TC007981] [Chromosome: LG4] [Map Location: ] [Description: lipase 3] [Gene Type: protein-coding]","LOC664277; TcasGA2_TC007981"]
[450,"NC_007419.2",3427575,"SNV","A","G","Homozygous",22,22,100,1,6,16,0.27,39.05,22,22,9,15,null,1,1,"no","G/G","No",1,86.11,"XP_975398.2:c.[3313T>C]; XP_008191939.1:c.[3007T>C]; XP_015834558.1:c.[3154T>C]; XP_008191938.1:c.[3250T>C]; XP_008191937.1:c.[3313T>C]; XP_015834559.1:c.[3313T>C]","XP_975398.2:p.[Ser1105Pro]; XP_008191939.1:p.[Ser1003Pro]; XP_015834558.1:p.[Ser1052Pro]; XP_008191938.1:p.[Ser1084Pro]; XP_008191937.1:p.[Ser1105Pro]; XP_015834559.1:p.[Ser1105Pro]","LOC664298",664298,null,"664298 [Gene Symbol: LOC664298] [Locus Tag: TcasGA2_TC007519] [Chromosome: LG4] [Map Location: ] [Description: AT-rich interactive domain-containing protein 2] [Gene Type: protein-coding]","LOC664298; TcasGA2_TC007519"]
[453,"NC_007419.2",3536217,"SNV","A","G","Homozygous",23,23,100,1,9,18,0.33,38.22,27,27,14,12,null,1,1,"no","G/G","No",1,89.12,"XP_008192005.1:c.362A>G","XP_008192005.1:p.Gln121Arg","LOC103312647",103312647,null,"103312647 [Gene Symbol: LOC103312647] [Locus Tag: TcasGA2_TC007990] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312647; TcasGA2_TC007990"]
[460,"NC_007419.2",3707791,"SNV","A","T","Homozygous",25,25,100,1,7,18,0.28,37.76,25,25,13,15,null,1,1,"no","T/T","No",1,96.74,"XP_015834670.1:c.[130T>A]; XP_968051.2:c.[130T>A]","XP_015834670.1:p.[Ser44Thr]; XP_968051.2:p.[Ser44Thr]","LOC656425",656425,null,"656425 [Gene Symbol: LOC656425] [Locus Tag: TcasGA2_TC007499] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC656425] [Gene Type: protein-coding]","LOC656425; TcasGA2_TC007499"]
[461,"NC_007419.2","3712828..3712829","MNV","CT","AA","Heterozygous",13,20,65,1,4,9,0.31,38.04,13,20,6,7,null,0.96,0.89,"no","complex","No",1,200,"XP_015834668.1:c.[1383_1384delCTinsAA]; XP_015834669.1:c.[843_844delCTinsAA]","XP_015834668.1:p.[Asn461_Ser462delinsLysThr]; XP_015834669.1:p.[Asn281_Ser282delinsLysThr]","LOC100141608",100141608,null,"100141608 [Gene Symbol: LOC100141608] [Locus Tag: TcasGA2_TC008000] [Chromosome: LG4] [Map Location: ] [Description: acyl-CoA synthetase family member 4] [Gene Type: protein-coding]","LOC100141608; TcasGA2_TC008000"]
[464,"NC_007419.2",3782277,"SNV","C","A","Homozygous",25,25,100,1,8,17,0.32,36.12,25,25,12,19,null,1,1,"no","A/A","No",1,96.74,"XP_976245.1:c.398C>A","XP_976245.1:p.Pro133Gln","LOC657405",657405,null,"657405 [Gene Symbol: LOC657405] [Locus Tag: TcasGA2_TC008005] [Chromosome: LG4] [Map Location: ] [Description: cuticle protein 16.5, isoform A] [Gene Type: protein-coding]","TcasGA2_TC008005; LOC657405"]
[465,"NC_007419.2",4011962,"SNV","A","G","Homozygous",23,23,100,1,12,14,0.46,36.83,26,26,15,14,null,1,1,"no","G/G","No",1,89.12,"XP_008192048.1:c.2161A>G","XP_008192048.1:p.Ile721Val","LOC659578",659578,null,"659578 [Gene Symbol: LOC659578] [Locus Tag: TcasGA2_TC008022] [Chromosome: LG4] [Map Location: ] [Description: transmembrane protein 131] [Gene Type: protein-coding]","TcasGA2_TC008022; LOC659578"]
[466,"NC_007419.2",4065692,"SNV","C","T","Homozygous",24,24,100,1,20,5,0.2,37.04,25,25,12,16,null,1,1,"no","T/T","No",1,93.73,"XP_008192378.1:c.962C>T","XP_008192378.1:p.Ser321Phe","LOC103312731",103312731,null,"103312731 [Gene Symbol: LOC103312731] [Locus Tag: TcasGA2_TC032800] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312731] [Gene Type: protein-coding]","LOC103312731; TcasGA2_TC032800"]
[467,"NC_007419.2",4065730,"SNV","G","A","Homozygous",20,20,100,1,14,9,0.39,36,23,23,14,12,null,1,1,"no","A/A","No",1,81.69,"XP_008192378.1:c.1000G>A","XP_008192378.1:p.Ala334Thr","LOC103312731",103312731,null,"103312731 [Gene Symbol: LOC103312731] [Locus Tag: TcasGA2_TC032800] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312731] [Gene Type: protein-coding]","LOC103312731; TcasGA2_TC032800"]
[469,"NC_007419.2",4105245,"SNV","G","C","Homozygous",21,21,100,1,2,19,0.1,39.9,21,21,5,6,null,1,1,"no","C/C","No",1,83.12,"XP_008192059.2:c.[817G>C]; XP_015835093.1:c.[817G>C]","XP_008192059.2:p.[Val273Leu]; XP_015835093.1:p.[Val273Leu]","LOC660654",660654,null,"660654 [Gene Symbol: LOC660654] [Locus Tag: TcasGA2_TC008032] [Chromosome: LG4] [Map Location: ] [Description: coiled-coil domain-containing protein 170] [Gene Type: protein-coding]","TcasGA2_TC008032; LOC660654"]
[471,"NC_007419.2",4137901,"SNV","C","G","Homozygous",26,26,100,1,9,19,0.32,38.73,28,28,15,18,null,1,1,"no","G/G","No",1,98.15,"XP_008192060.1:c.517C>G","XP_008192060.1:p.Pro173Ala","LOC660927",660927,null,"660927 [Gene Symbol: LOC660927] [Locus Tag: TcasGA2_TC008035] [Chromosome: LG4] [Map Location: ] [Description: multidrug resistance-associated protein 7] [Gene Type: protein-coding]","LOC660927; TcasGA2_TC008035"]
[472,"NC_007419.2",4264846,"SNV","T","A","Homozygous",20,20,100,1,14,6,0.3,39.35,20,20,13,16,null,1,1,"no","A/A","No",1,81.69,"XP_008192072.1:c.[1001A>T]; XP_008192073.1:c.[953A>T]","XP_008192072.1:p.[Tyr334Phe]; XP_008192073.1:p.[Tyr318Phe]","LOC103312659",103312659,null,"103312659 [Gene Symbol: LOC103312659] [Locus Tag: TcasGA2_TC007456] [Chromosome: LG4] [Map Location: ] [Description: zinc finger protein 112] [Gene Type: protein-coding]","LOC103312659; TcasGA2_TC007456"]
[473,"NC_007419.2",4265269,"SNV","C","T","Heterozygous",9,21,42.86,1,3,8,0.27,38.44,11,24,5,6,0.21,0.09,0.74,"no","C/T","No",1,68.88,"XP_008192072.1:c.[578G>A]; XP_008192073.1:c.[530G>A]","XP_008192072.1:p.[Arg193Lys]; XP_008192073.1:p.[Arg177Lys]","LOC103312659",103312659,null,"103312659 [Gene Symbol: LOC103312659] [Locus Tag: TcasGA2_TC007456] [Chromosome: LG4] [Map Location: ] [Description: zinc finger protein 112] [Gene Type: protein-coding]","LOC103312659; TcasGA2_TC007456"]
[474,"NC_007419.2",4265282,"SNV","T","C","Heterozygous",14,23,60.87,1,10,5,0.33,37.5,15,27,8,10,-0.66,0.34,0.7,"no","C/T","No",1,63.35,"XP_008192072.1:c.[565A>G]; XP_008192073.1:c.[517A>G]","XP_008192072.1:p.[Lys189Glu]; XP_008192073.1:p.[Lys173Glu]","LOC103312659",103312659,null,"103312659 [Gene Symbol: LOC103312659] [Locus Tag: TcasGA2_TC007456] [Chromosome: LG4] [Map Location: ] [Description: zinc finger protein 112] [Gene Type: protein-coding]","LOC103312659; TcasGA2_TC007456"]
[475,"NC_007419.2",4270196,"SNV","T","G","Homozygous",25,25,100,1,17,13,0.43,36.92,30,30,15,20,null,1,1,"no","G/G","No",1,95.14,"XP_972622.1:c.[118T>G]; XP_008192070.1:c.[118T>G]","XP_972622.1:p.[Ser40Ala]; XP_008192070.1:p.[Ser40Ala]","LOC661368",661368,null,"661368 [Gene Symbol: LOC661368] [Locus Tag: TcasGA2_TC008045] [Chromosome: LG4] [Map Location: ] [Description: coronin-7] [Gene Type: protein-coding]","LOC661368; TcasGA2_TC008045"]
[476,"NC_007419.2","4347953..4347954","MNV","TT","CC","Homozygous",28,28,100,1,19,13,0.41,35.79,32,32,14,17,null,1,1,"no","CC/CC","No",1,200,"XP_001814289.1:c.[1730_1731delTTinsCC]; XP_015834883.1:c.[1661_1662delTTinsCC]","XP_001814289.1:p.[Ile577Thr]; XP_015834883.1:p.[Ile554Thr]","LOC100142575",100142575,null,"100142575 [Gene Symbol: LOC100142575] [Locus Tag: TcasGA2_TC008051] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142575] [Gene Type: protein-coding]","LOC100142575; TcasGA2_TC008051"]
[477,"NC_007419.2",4409170,"SNV","G","A","Heterozygous",10,24,41.67,1,8,4,0.33,38.4,12,30,8,9,0.97,0.92,1,"no","A/G","No",1,73.42,"XP_008192382.1:c.1135G>A","XP_008192382.1:p.Val379Met","LOC662185",662185,null,"662185 [Gene Symbol: LOC662185] [Locus Tag: TcasGA2_TC032806] [Chromosome: LG4] [Map Location: ] [Description: TWiK family of potassium channels protein 9] [Gene Type: protein-coding]","LOC662185; TcasGA2_TC032806"]
[478,"NC_007419.2",4679274,"SNV","T","A","Homozygous",22,22,100,1,5,20,0.2,38.73,25,25,8,10,null,1,1,"no","A/A","No",1,87.71,"XP_008192115.1:c.[1210A>T]; XP_008192117.1:c.[1132A>T]; XP_008192116.1:c.[1204A>T]; XP_008192113.1:c.[1210A>T]","XP_008192115.1:p.[Thr404Ser]; XP_008192117.1:p.[Thr378Ser]; XP_008192116.1:p.[Thr402Ser]; XP_008192113.1:p.[Thr404Ser]","LOC663093",663093,null,"663093 [Gene Symbol: LOC663093] [Locus Tag: TcasGA2_TC007427] [Chromosome: LG4] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","TcasGA2_TC007427; LOC663093"]
[479,"NC_007419.2","4751131..4751132","MNV","AA","GG","Heterozygous",15,21,71.43,1,8,7,0.47,39.53,15,21,8,13,null,0.88,1,"no","complex","No",1,200,"XP_974350.1:c.1720_1721delTTinsCC","XP_974350.1:p.Leu574Pro","LOC663199",663199,null,"663199 [Gene Symbol: LOC663199] [Locus Tag: TcasGA2_TC007421] [Chromosome: LG4] [Map Location: ] [Description: RNA-binding protein 28] [Gene Type: protein-coding]","LOC663199; TcasGA2_TC007421"]
[480,"NC_007419.2","4751131..4751133","MNV","AAG","GGA","Heterozygous",6,21,28.57,1,2,4,0.33,38.44,6,21,4,6,null,0.65,0.91,"no","complex","No",1,200,"XP_974350.1:c.1719_1721delCTTinsTCC","XP_974350.1:p.Leu574Pro","LOC663199",663199,null,"663199 [Gene Symbol: LOC663199] [Locus Tag: TcasGA2_TC007421] [Chromosome: LG4] [Map Location: ] [Description: RNA-binding protein 28] [Gene Type: protein-coding]","LOC663199; TcasGA2_TC007421"]
[481,"NC_007419.2",4975744,"SNV","G","A","Heterozygous",8,22,36.36,1,1,8,0.11,40.62,9,25,3,6,2.49,0.03,0.81,"no","A/G","No",1,53.51,"XP_974764.1:c.1090G>A","XP_974764.1:p.Asp364Asn","LOC663633",663633,null,"663633 [Gene Symbol: LOC663633] [Locus Tag: TcasGA2_TC008092] [Chromosome: LG4] [Map Location: ] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","LOC663633; TcasGA2_TC008092"]
[482,"NC_007419.2",4995423,"Deletion","A","-","Heterozygous",9,20,45,1,3,7,0.3,38.11,10,21,7,9,-1.6,0.45,1,"no","-/A","Yes",3,70.82,"XP_008192137.1:c.569delA","XP_008192137.1:p.Met191fs","LOC103312668",103312668,null,"103312668 [Gene Symbol: LOC103312668] [Locus Tag: TcasGA2_TC008097] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312668; TcasGA2_TC008097"]
[483,"NC_007419.2",4995437,"SNV","G","C","Homozygous",20,20,100,1,6,15,0.29,38.7,21,21,12,16,null,1,1,"no","C/C","No",1,80.12,"XP_008192137.1:c.583G>C","XP_008192137.1:p.Glu195Gln","LOC103312668",103312668,null,"103312668 [Gene Symbol: LOC103312668] [Locus Tag: TcasGA2_TC008097] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312668; TcasGA2_TC008097"]
[486,"NC_007419.2",5052197,"SNV","A","G","Homozygous",22,23,95.65,1,14,16,0.47,37.86,30,31,12,12,null,1,1,"no","G/G","No",1,61.55,"XP_015834463.1:c.6854A>G","XP_015834463.1:p.Asn2285Ser","LOC663896",663896,null,"663896 [Gene Symbol: LOC663896] [Locus Tag: TcasGA2_TC008109] [Chromosome: LG4] [Map Location: ] [Description: cytoplasmic dynein 2 heavy chain 1] [Gene Type: protein-coding]","TcasGA2_TC008109; LOC663896"]
[487,"NC_007419.2",5058231,"SNV","C","G","Heterozygous",10,20,50,1,7,3,0.3,37,10,20,4,6,-1.29,0.87,1,"no","C/G","No",1,81.39,"XP_015834463.1:c.11733C>G","XP_015834463.1:p.Asp3911Glu","LOC663896",663896,null,"663896 [Gene Symbol: LOC663896] [Locus Tag: TcasGA2_TC008109] [Chromosome: LG4] [Map Location: ] [Description: cytoplasmic dynein 2 heavy chain 1] [Gene Type: protein-coding]","TcasGA2_TC008109; LOC663896"]
[488,"NC_007419.2",5069288,"SNV","G","A","Homozygous",22,22,100,1,6,17,0.26,38.55,23,23,12,16,null,1,1,"no","A/A","No",1,87.71,"XP_001815774.1:c.109G>A","XP_001815774.1:p.Val37Ile","LOC100141744",100141744,null,"100141744 [Gene Symbol: LOC100141744] [Locus Tag: TcasGA2_TC008111] [Chromosome: LG4] [Map Location: ] [Description: gem-associated protein 5] [Gene Type: protein-coding]","LOC100141744; TcasGA2_TC008111"]
[494,"NC_007419.2",5775738,"SNV","A","C","Heterozygous",15,25,60,1,0,15,0,38.33,15,27,5,7,0.55,0.64,0.37,"no","A/C","No",1,66.93,"XP_008192213.1:c.[1162T>G]; XP_008192215.1:c.[820T>G]; XP_008192217.1:c.[673T>G]; XP_008192214.1:c.[1093T>G]","XP_008192213.1:p.[Ser388Ala]; XP_008192215.1:p.[Ser274Ala]; XP_008192217.1:p.[Ser225Ala]; XP_008192214.1:p.[Ser365Ala]","LOC103312685",103312685,null,"103312685 [Gene Symbol: LOC103312685] [Locus Tag: TcasGA2_TC007354] [Chromosome: LG4] [Map Location: ] [Description: titin homolog] [Gene Type: protein-coding]","TcasGA2_TC007354; LOC103312685"]
[495,"NC_007419.2","5803369..5803371","Deletion","TTA","-","Heterozygous",9,21,42.86,1,3,7,0.3,37,10,24,6,7,-0.34,0.93,0.83,"no","complex","No",1,200,"XP_975464.2:c.2049_2051delTAA","XP_975464.2:p.Asn684del","LOC664362",664362,null,"664362 [Gene Symbol: LOC664362] [Locus Tag: TcasGA2_TC007351] [Chromosome: LG4] [Map Location: ] [Description: spondin-1] [Gene Type: protein-coding]","LOC664362; TcasGA2_TC007351"]
[499,"NC_007419.2",6287483,"SNV","G","T","Homozygous",20,20,100,1,13,9,0.41,38.15,22,22,12,17,null,1,1,"no","T/T","No",1,81.7,"XP_015834332.1:c.1000C>A","XP_015834332.1:p.His334Asn","LOC103312745",103312745,null,"103312745 [Gene Symbol: LOC103312745] [Locus Tag: TcasGA2_TC007307] [Chromosome: LG4] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC103312745; TcasGA2_TC007307"]
[500,"NC_007419.2",6310221,"SNV","G","T","Heterozygous",13,21,61.9,1,3,11,0.21,38.08,14,23,8,9,0.94,0.89,0.99,"no","G/T","No",1,56.81,"XP_008192273.1:c.[949C>A]; XP_008192274.1:c.[949C>A]; XP_008192276.1:c.[901C>A]; XP_008192277.1:c.[727C>A]; XP_008192272.1:c.[949C>A]","XP_008192273.1:p.[Leu317Ile]; XP_008192274.1:p.[Leu317Ile]; XP_008192276.1:p.[Leu301Ile]; XP_008192277.1:p.[Leu243Ile]; XP_008192272.1:p.[Leu317Ile]","LOC664496",664496,null,"664496 [Gene Symbol: LOC664496] [Locus Tag: TcasGA2_TC007305] [Chromosome: LG4] [Map Location: ] [Description: anoctamin-1] [Gene Type: protein-coding]","TcasGA2_TC007305; LOC664496"]
[502,"NC_007419.2",6349177,"SNV","T","G","Heterozygous",15,28,53.57,1,11,6,0.35,38.6,17,30,9,9,-0.18,0.81,1,"no","G/T","No",1,97.03,"XP_008192282.1:c.538T>G","XP_008192282.1:p.Ser180Ala","LOC664506",664506,null,"664506 [Gene Symbol: LOC664506] [Locus Tag: TcasGA2_TC008189] [Chromosome: LG4] [Map Location: ] [Description: DNA-directed RNA polymerase III subunit RPC3] [Gene Type: protein-coding]","TcasGA2_TC008189; LOC664506"]
[504,"NC_007419.2","6633760..6633761","MNV","CA","GT","Heterozygous",7,23,30.43,1,4,4,0.5,36.64,8,24,4,7,null,0.86,0.92,"no","complex","No",1,200,"XP_015834333.1:c.2709_2710delTGinsAC","XP_015834333.1:p.Gly904Arg","LOC100141964",100141964,null,"100141964 [Gene Symbol: LOC100141964] [Locus Tag: TcasGA2_TC007273] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: elastin] [Gene Type: protein-coding]","LOC100141964; TcasGA2_TC007273"]
[505,"NC_007419.2",6633823,"SNV","C","T","Heterozygous",10,24,41.67,1,6,5,0.45,38.1,11,25,5,8,-0.03,0.2,0.6,"no","C/T","No",1,73.26,"XP_015834333.1:c.2647G>A","XP_015834333.1:p.Gly883Arg","LOC100141964",100141964,null,"100141964 [Gene Symbol: LOC100141964] [Locus Tag: TcasGA2_TC007273] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: elastin] [Gene Type: protein-coding]","LOC100141964; TcasGA2_TC007273"]
[506,"NC_007419.2",6660458,"SNV","C","T","Homozygous",21,21,100,1,15,12,0.44,39.67,27,27,12,13,null,1,1,"no","T/T","No",1,84.7,"XP_015834808.1:c.398G>A","XP_015834808.1:p.Ser133Asn","LOC107397801",107397801,null,"107397801 [Gene Symbol: LOC107397801] [Locus Tag: TcasGA2_TC030426] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397801] [Gene Type: protein-coding]","LOC107397801; TcasGA2_TC030426; Or313"]
[509,"NC_007419.2",6754282,"SNV","T","G","Homozygous",20,20,100,1,13,10,0.43,37.7,23,23,14,20,null,1,1,"no","G/G","No",1,80.09,"XP_001816525.1:c.[549A>C]; XP_015834996.1:c.[549A>C]; XP_008192327.1:c.[549A>C]; XP_008192326.1:c.[549A>C]; XP_015834997.1:c.[549A>C]","XP_001816525.1:p.[Gln183His]; XP_015834996.1:p.[Gln183His]; XP_008192327.1:p.[Gln183His]; XP_008192326.1:p.[Gln183His]; XP_015834997.1:p.[Gln183His]","LOC100141541",100141541,null,"100141541 [Gene Symbol: LOC100141541] [Locus Tag: TcasGA2_TC007258] [Chromosome: LG4] [Map Location: ] [Description: pupal cuticle protein 36] [Gene Type: protein-coding]","TcasGA2_TC007258; LOC100141541"]
[512,"NC_007419.2",6946357,"SNV","C","T","Heterozygous",11,26,42.31,1,11,1,0.08,39.27,12,27,6,8,0.16,0.04,0.03,"no","C/T","No",1,80.37,"XP_008192357.1:c.[1237G>A]; XP_008192356.1:c.[1261G>A]","XP_008192357.1:p.[Val413Ile]; XP_008192356.1:p.[Val421Ile]","LOC664559",664559,null,"664559 [Gene Symbol: LOC664559] [Locus Tag: TcasGA2_TC007247] [Chromosome: LG4] [Map Location: ] [Description: croquemort] [Gene Type: protein-coding]","TcasGA2_TC007247; LOC664559; crq"]
[514,"NC_007419.2","7091698^7091699","Insertion","-","CT","Heterozygous",8,24,33.33,1,7,3,0.3,37.62,10,27,5,9,1.9,0.76,0.93,"no","complex","No",1,200,"XP_008192501.1:c.[177_178insCT]; XP_008192500.1:c.[177_178insCT]","XP_008192501.1:p.[Ile60fs]; XP_008192500.1:p.[Ile60fs]","LOC655677",655677,null,"655677 [Gene Symbol: LOC655677] [Locus Tag: TcasGA2_TC008234] [Chromosome: LG4] [Map Location: ] [Description: spidroin-1] [Gene Type: protein-coding]","LOC655677; TcasGA2_TC008234"]
[516,"NC_007419.2",7092570,"SNV","G","A","Heterozygous",9,20,45,1,7,3,0.3,39,10,23,5,8,1.14,0.73,0.96,"no","A/G","No",1,71.7,"XP_008192500.1:c.[1049G>A]; XP_008192501.1:c.[1049G>A]","XP_008192500.1:p.[Gly350Glu]; XP_008192501.1:p.[Gly350Glu]","LOC655677",655677,null,"655677 [Gene Symbol: LOC655677] [Locus Tag: TcasGA2_TC008234] [Chromosome: LG4] [Map Location: ] [Description: spidroin-1] [Gene Type: protein-coding]","LOC655677; TcasGA2_TC008234"]
[518,"NC_007419.2",7142527,"SNV","T","C","Homozygous",25,25,100,1,3,23,0.12,35.52,26,26,11,16,null,1,1,"no","C/C","No",1,95.16,"XP_015834336.1:c.131T>C","XP_015834336.1:p.Leu44Pro","LOC107397718",107397718,null,"107397718 [Gene Symbol: LOC107397718] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: fibrous sheath CABYR-binding protein-like] [Gene Type: protein-coding]","LOC107397718"]
[519,"NC_007419.2",7171062,"SNV","G","A","Heterozygous",10,20,50,1,4,6,0.4,36.8,10,21,5,5,-0.79,0.49,0.99,"no","A/G","No",1,81.98,"XP_015834640.1:c.[4682C>T]; XP_015834639.1:c.[4682C>T]; XP_015834641.1:c.[4679C>T]; XP_015834644.1:c.[4574C>T]; XP_015834638.1:c.[4682C>T]; XP_015834642.1:c.[4682C>T]; XP_015834646.1:c.[3086C>T]; XP_015834647.1:c.[2618C>T]; XP_015834643.1:c.[4682C>T]; XP_015834645.1:c.[3857C>T]","XP_015834640.1:p.[Thr1561Ile]; XP_015834639.1:p.[Thr1561Ile]; XP_015834641.1:p.[Thr1560Ile]; XP_015834644.1:p.[Thr1525Ile]; XP_015834638.1:p.[Thr1561Ile]; XP_015834642.1:p.[Thr1561Ile]; XP_015834646.1:p.[Thr1029Ile]; XP_015834647.1:p.[Thr873Ile]; XP_015834643.1:p.[Thr1561Ile]; XP_015834645.1:p.[Thr1286Ile]","LOC656932",656932,null,"656932 [Gene Symbol: LOC656932] [Locus Tag: TcasGA2_TC007231] [Chromosome: LG4] [Map Location: ] [Description: mucin-2] [Gene Type: protein-coding]","TcasGA2_TC007231; LOC656932"]
[522,"NC_007419.2",7172649,"SNV","G","A","Heterozygous",10,23,43.48,1,10,0,0,38.3,10,23,6,8,1.12,0.32,0.36,"no","A/G","No",1,76.17,"XP_015834643.1:c.[3446C>T]; XP_015834647.1:c.[2380-1349C>T]; XP_015834642.1:c.[3446C>T]; XP_015834640.1:c.[3446C>T]; XP_015834646.1:c.[2847+599C>T]; XP_015834639.1:c.[3446C>T]; XP_015834644.1:c.[3446C>T]; XP_015834641.1:c.[3443C>T]; XP_015834645.1:c.[3446C>T]; XP_015834638.1:c.[3446C>T]","XP_015834643.1:p.[Pro1149Leu]; XP_015834642.1:p.[Pro1149Leu]; XP_015834640.1:p.[Pro1149Leu]; XP_015834639.1:p.[Pro1149Leu]; XP_015834644.1:p.[Pro1149Leu]; XP_015834641.1:p.[Pro1148Leu]; XP_015834645.1:p.[Pro1149Leu]; XP_015834638.1:p.[Pro1149Leu]","LOC656932",656932,null,"656932 [Gene Symbol: LOC656932] [Locus Tag: TcasGA2_TC007231] [Chromosome: LG4] [Map Location: ] [Description: mucin-2] [Gene Type: protein-coding]","TcasGA2_TC007231; LOC656932"]
[523,"NC_007419.2",7251650,"SNV","T","G","Heterozygous",13,27,48.15,1,11,3,0.21,37,14,28,7,8,-0.51,0.82,1,"no","G/T","No",1,93.91,"XP_008192538.1:c.[1768A>C]; XP_015835078.1:c.[1768A>C]; XP_015835077.1:c.[1768A>C]; XP_015835076.1:c.[1768A>C]","XP_008192538.1:p.[Asn590His]; XP_015835078.1:p.[Asn590His]; XP_015835077.1:p.[Asn590His]; XP_015835076.1:p.[Asn590His]","LOC658035",658035,null,"658035 [Gene Symbol: LOC658035] [Locus Tag: TcasGA2_TC007226] [Chromosome: LG4] [Map Location: ] [Description: peroxidasin-like protein] [Gene Type: protein-coding]","TcasGA2_TC007226; LOC658035"]
[527,"NC_007419.2",7630317,"SNV","A","T","Homozygous",22,22,100,1,16,9,0.36,38.86,25,25,10,16,null,1,1,"no","T/T","No",1,87.71,"XP_008192565.1:c.474A>T","XP_008192565.1:p.Leu158Phe","LOC660709",660709,null,"660709 [Gene Symbol: LOC660709] [Locus Tag: TcasGA2_TC008271] [Chromosome: LG4] [Map Location: ] [Description: 39S ribosomal protein L28, mitochondrial] [Gene Type: protein-coding]","LOC660709; TcasGA2_TC008271"]
[528,"NC_007419.2",7630725,"SNV","A","G","Homozygous",28,28,100,1,11,18,0.38,39.46,29,29,18,17,null,1,1,"no","G/G","No",1,104.17,"XP_008192565.1:c.775A>G","XP_008192565.1:p.Ser259Gly","LOC660709",660709,null,"660709 [Gene Symbol: LOC660709] [Locus Tag: TcasGA2_TC008271] [Chromosome: LG4] [Map Location: ] [Description: 39S ribosomal protein L28, mitochondrial] [Gene Type: protein-coding]","LOC660709; TcasGA2_TC008271"]
[529,"NC_007419.2",7853539,"SNV","C","T","Homozygous",23,23,100,1,20,6,0.23,36.3,26,26,14,17,null,1,1,"no","T/T","No",1,87.71,"XP_015834678.1:c.[2215G>A]; XP_008192574.1:c.[2212G>A]; XP_972707.2:c.[2215G>A]","XP_015834678.1:p.[Ala739Thr]; XP_008192574.1:p.[Ala738Thr]; XP_972707.2:p.[Ala739Thr]","LOC661459",661459,null,"661459 [Gene Symbol: LOC661459] [Locus Tag: TcasGA2_TC007192] [Chromosome: LG4] [Map Location: ] [Description: transcription factor SPT20 homolog] [Gene Type: protein-coding]","LOC661459; TcasGA2_TC007192"]
[530,"NC_007419.2",7868809,"SNV","C","T","Homozygous",19,20,95,1,10,10,0.5,38.63,20,21,12,12,null,0.99,1,"no","T/T","No",1,50.04,"XP_015834679.1:c.1981C>T","XP_015834679.1:p.His661Tyr","LOC103312777",103312777,null,"103312777 [Gene Symbol: LOC103312777] [Locus Tag: TcasGA2_TC008283] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312777] [Gene Type: protein-coding]","TcasGA2_TC008283; LOC103312777"]
[531,"NC_007419.2",7869526,"SNV","G","T","Homozygous",20,20,100,1,12,11,0.48,38.1,23,23,9,13,null,1,1,"no","T/T","No",1,81.7,"XP_015834679.1:c.2602G>T","XP_015834679.1:p.Gly868Cys","LOC103312777",103312777,null,"103312777 [Gene Symbol: LOC103312777] [Locus Tag: TcasGA2_TC008283] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312777] [Gene Type: protein-coding]","TcasGA2_TC008283; LOC103312777"]
[532,"NC_007419.2",7879259,"SNV","G","C","Homozygous",21,22,95.45,1,12,12,0.5,36.71,24,25,9,12,null,1,1,"no","C/C","No",1,54.89,"XP_015834337.1:c.1688C>G","XP_015834337.1:p.Thr563Arg","LOC661718",661718,null,"661718 [Gene Symbol: LOC661718] [Locus Tag: TcasGA2_TC007187] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC661718] [Gene Type: protein-coding]","LOC661718; TcasGA2_TC007187"]
[533,"NC_007419.2",7880940,"SNV","G","C","Heterozygous",12,20,60,1,3,10,0.23,36.33,13,21,7,11,0.31,0.99,1,"no","C/G","No",1,58.96,"XP_015834337.1:c.231C>G","XP_015834337.1:p.Phe77Leu","LOC661718",661718,null,"661718 [Gene Symbol: LOC661718] [Locus Tag: TcasGA2_TC007187] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC661718] [Gene Type: protein-coding]","LOC661718; TcasGA2_TC007187"]
[534,"NC_007419.2","7885240..7885241","MNV","GG","CA","Homozygous",23,23,100,1,11,14,0.44,39.2,25,25,19,20,null,1,1,"no","CA/CA","No",1,200,"XP_973063.1:c.288_289delCCinsTG","XP_973063.1:p.Gln97Glu","LOC661837",661837,null,"661837 [Gene Symbol: LOC661837] [Locus Tag: TcasGA2_TC032875] [Chromosome: LG4] [Map Location: ] [Description: lipase 1-like] [Gene Type: protein-coding]","LOC661837; TcasGA2_TC032875"]
[539,"NC_007419.2",8283163,"SNV","T","C","Heterozygous",20,30,66.67,1,7,13,0.35,38.45,20,33,10,10,1.08,0.81,0.92,"no","C/T","No",1,56.57,"XP_974173.2:c.[590-10723T>C]; XP_015835010.1:c.[280+236A>G]; XP_015835009.1:c.[470A>G]","XP_015835009.1:p.Asn157Ser","LOC663015, LOC107397843","663015 , 107397843",null,"663015 [Gene Symbol: LOC663015] [Locus Tag: TcasGA2_TC008308] [Chromosome: LG4] [Map Location: ] [Description: carbonic anhydrase-related protein 10] [Gene Type: protein-coding] || 107397843 [Gene Symbol: LOC107397843] [Locus Tag: TcasGA2_TC031112] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397843] [Gene Type: protein-coding]","LOC663015; TcasGA2_TC008308 || TcasGA2_TC031112; LOC107397843"]
[541,"NC_007419.2",8472499,"SNV","T","C","Homozygous",35,35,100,1,16,29,0.36,36.31,45,45,19,21,null,1,1,"no","C/C","No",1,125.24,"XP_015834761.1:c.[1061T>C]; XP_015834758.1:c.[1151T>C]; XP_008192646.1:c.[857T>C]; XP_015834764.1:c.[965T>C]; XP_015834759.1:c.[1109T>C]; XP_015834757.1:c.[1151T>C]; XP_015834767.1:c.[1151T>C]; XP_015834763.1:c.[977T>C]; XP_015834765.1:c.[965T>C]; XP_015834762.1:c.[1043T>C]; XP_015834760.1:c.[1085T>C]; XP_008192645.1:c.[857T>C]; XP_015834769.1:c.[716T>C]; XP_015834766.1:c.[1151T>C]; XP_015834768.1:c.[1151T>C]","XP_015834761.1:p.[Ile354Thr]; XP_015834758.1:p.[Ile384Thr]; XP_008192646.1:p.[Ile286Thr]; XP_015834764.1:p.[Ile322Thr]; XP_015834759.1:p.[Ile370Thr]; XP_015834757.1:p.[Ile384Thr]; XP_015834767.1:p.[Ile384Thr]; XP_015834763.1:p.[Ile326Thr]; XP_015834765.1:p.[Ile322Thr]; XP_015834762.1:p.[Ile348Thr]; XP_015834760.1:p.[Ile362Thr]; XP_008192645.1:p.[Ile286Thr]; XP_015834769.1:p.[Ile239Thr]; XP_015834766.1:p.[Ile384Thr]; XP_015834768.1:p.[Ile384Thr]","LOC663563",663563,null,"663563 [Gene Symbol: LOC663563] [Locus Tag: TcasGA2_TC008323] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC663563] [Gene Type: protein-coding]","TcasGA2_TC008323; LOC663563"]
[542,"NC_007419.2",8690097,"SNV","A","G","Heterozygous",10,32,31.25,1,5,8,0.38,39.1,13,35,6,7,0.51,0.17,0.79,"no","A/G","No",1,56.04,"XP_015834829.1:c.73A>G","XP_015834829.1:p.Ile25Val","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[544,"NC_007419.2","8691007^8691008","Insertion","-","TT","Heterozygous",7,22,31.82,1,4,6,0.4,35.36,10,27,5,6,-3.65,0.05,0.48,"no","complex","Yes",7,200,"XP_015834829.1:c.983_984insTT","XP_015834829.1:p.Gly331fs","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[545,"NC_007419.2",8691177,"SNV","G","A","Heterozygous",14,49,28.57,1,11,9,0.45,39.29,20,55,12,14,1.34,0.69,1,"no","A/G","No",1,54.6,"XP_015834829.1:c.1153G>A","XP_015834829.1:p.Asp385Asn","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[547,"NC_007419.2",8691216,"SNV","A","T","Homozygous",56,56,100,1,45,17,0.27,39.34,62,62,36,38,null,1,1,"no","T/T","No",1,159.55,"XP_015834829.1:c.1192A>T","XP_015834829.1:p.Met398Leu","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[548,"NC_007419.2",8691243,"SNV","G","A","Heterozygous",18,53,33.96,1,11,9,0.45,39.17,20,63,11,10,0.58,0.67,0.75,"no","A/G","No",1,94.35,"XP_015834829.1:c.1219G>A","XP_015834829.1:p.Val407Ile","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[549,"NC_007419.2",8691265,"SNV","G","A","Heterozygous",15,48,31.25,1,12,10,0.45,39.2,22,64,9,11,0.02,0.73,0.99,"no","A/G","No",1,70.11,"XP_015834829.1:c.1241G>A","XP_015834829.1:p.Gly414Asp","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[550,"NC_007419.2",8691333,"SNV","C","T","Heterozygous",19,50,38,1,12,8,0.4,39.21,20,55,14,16,1.2,0.24,0.67,"no","C/T","No",1,118.04,"XP_015834829.1:c.1309C>T","XP_015834829.1:p.Pro437Ser","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[555,"NC_007419.2",8691416,"SNV","A","T","Heterozygous",21,52,40.38,1,11,14,0.44,39.86,25,61,15,15,1.96,0.84,0.89,"no","A/T","No",1,135.82,"XP_015834829.1:c.1392A>T","XP_015834829.1:p.Leu464Phe","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[556,"NC_007419.2",8691520,"SNV","A","G","Homozygous",61,68,89.71,1,29,40,0.42,38.23,69,82,37,40,null,1,1,"no","G/G","No",1,87.38,"XP_015834829.1:c.1496A>G","XP_015834829.1:p.Tyr499Cys","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[557,"NC_007419.2",8691532,"SNV","T","C","Homozygous",62,69,89.86,1,31,36,0.46,38.39,67,79,38,41,null,1,1,"no","C/C","No",1,90.34,"XP_015834829.1:c.1508T>C","XP_015834829.1:p.Leu503Pro","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[558,"NC_007419.2",8691555,"Deletion","A","-","Heterozygous",30,74,40.54,1,19,12,0.39,37.43,31,84,20,21,-0.61,0.54,0.49,"no","-/A","Yes",6,200,"XP_015834829.1:c.1531delA","XP_015834829.1:p.Lys512fs","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[559,"NC_007419.2",8691580,"SNV","A","T","Heterozygous",26,63,41.27,1,14,13,0.48,36.73,27,74,20,19,-0.47,0.33,0.82,"no","A/T","No",1,200,"XP_015834829.1:c.1556A>T","XP_015834829.1:p.Tyr519Phe","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[560,"NC_007419.2",8691586,"Deletion","A","-","Heterozygous",24,57,42.11,1,13,12,0.48,37.08,25,67,18,17,-0.92,0.61,0.82,"no","-/A","Yes",5,156.54,"XP_015834829.1:c.1562delA","XP_015834829.1:p.Glu523fs","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[562,"NC_007419.2",8917864,"SNV","G","A","Homozygous",20,20,100,1,8,13,0.38,39.85,21,21,11,12,null,1,1,"no","A/A","No",1,81.69,"XP_015834885.1:c.[482C>T]; XP_975065.2:c.[41-251G>A]","XP_015834885.1:p.Ser161Leu","LOC663945, LOC100142143","663945 , 100142143",null,"663945 [Gene Symbol: LOC663945] [Locus Tag: TcasGA2_TC008349] [Chromosome: LG4] [Map Location: ] [Description: RWD domain-containing protein 2A] [Gene Type: protein-coding] || 100142143 [Gene Symbol: LOC100142143] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142143] [Gene Type: protein-coding]","LOC663945; TcasGA2_TC008349 || LOC100142143"]
[563,"NC_007419.2",8955581,"SNV","G","A","Heterozygous",9,23,39.13,1,8,2,0.2,36.56,10,32,6,6,-0.69,0.48,0.73,"no","A/G","No",1,63.52,"XP_015834655.1:c.[476G>A]; XP_015834654.1:c.[503G>A]; XP_015834656.1:c.[476G>A]","XP_015834655.1:p.[Arg159Gln]; XP_015834654.1:p.[Arg168Gln]; XP_015834656.1:p.[Arg159Gln]","LOC107397770",107397770,null,"107397770 [Gene Symbol: LOC107397770] [Locus Tag: TcasGA2_TC008352] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397770] [Gene Type: protein-coding]","TcasGA2_TC008352; LOC107397770"]
[564,"NC_007419.2",8955601,"SNV","G","A","Heterozygous",10,26,38.46,1,6,8,0.43,35.6,14,34,6,5,-1.08,0.3,0.94,"no","A/G","No",1,68.01,"XP_015834654.1:c.[523G>A]; XP_015834655.1:c.[496G>A]; XP_015834656.1:c.[496G>A]","XP_015834654.1:p.[Asp175Asn]; XP_015834655.1:p.[Asp166Asn]; XP_015834656.1:p.[Asp166Asn]","LOC107397770",107397770,null,"107397770 [Gene Symbol: LOC107397770] [Locus Tag: TcasGA2_TC008352] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397770] [Gene Type: protein-coding]","TcasGA2_TC008352; LOC107397770"]
[565,"NC_007419.2",9231780,"SNV","A","G","Heterozygous",11,20,55,1,6,5,0.45,36.36,11,20,8,6,-1.86,0.04,0.65,"no","A/G","No",1,71.68,"XP_015834691.1:c.[1657T>C]; XP_015834690.1:c.[1657T>C]","XP_015834691.1:p.[Ser553Pro]; XP_015834690.1:p.[Ser553Pro]","LOC664279",664279,null,"664279 [Gene Symbol: LOC664279] [Locus Tag: TcasGA2_TC007111] [Chromosome: LG4] [Map Location: ] [Description: YLP motif-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC007111; LOC664279"]
[569,"NC_007419.2",9716823,"SNV","C","T","Homozygous",21,21,100,1,12,9,0.43,38.1,21,21,10,12,null,1,1,"no","T/T","No",1,84.7,"XP_008192771.1:c.[1618G>A]; XP_015834346.1:c.[1369G>A]; XP_008192769.1:c.[1708G>A]; XP_008192770.1:c.[1618G>A]; XP_008192775.1:c.[1369G>A]; XP_015834345.1:c.[1516G>A]; XP_008192774.1:c.[1537G>A]; XP_015834344.1:c.[1543G>A]; XP_008192772.1:c.[1618G>A]","XP_008192771.1:p.[Ala540Thr]; XP_015834346.1:p.[Ala457Thr]; XP_008192769.1:p.[Ala570Thr]; XP_008192770.1:p.[Ala540Thr]; XP_008192775.1:p.[Ala457Thr]; XP_015834345.1:p.[Ala506Thr]; XP_008192774.1:p.[Ala513Thr]; XP_015834344.1:p.[Ala515Thr]; XP_008192772.1:p.[Ala540Thr]","LOC657019",657019,null,"657019 [Gene Symbol: LOC657019] [Locus Tag: TcasGA2_TC007088] [Chromosome: LG4] [Map Location: ] [Description: apoptosis-stimulating of p53 protein 1] [Gene Type: protein-coding]","LOC657019; TcasGA2_TC007088"]
[570,"NC_007419.2",9808947,"SNV","G","A","Homozygous",26,26,100,1,19,8,0.3,37.69,27,27,12,19,null,1,1,"no","A/A","No",1,99.74,"XP_008192769.1:c.[75+899C>T]; XP_001809578.1:c.[325G>A]","XP_001809578.1:p.Ala109Thr","LOC657019, LOC100142512","657019 , 100142512",null,"657019 [Gene Symbol: LOC657019] [Locus Tag: TcasGA2_TC007088] [Chromosome: LG4] [Map Location: ] [Description: apoptosis-stimulating of p53 protein 1] [Gene Type: protein-coding] || 100142512 [Gene Symbol: LOC100142512] [Locus Tag: TcasGA2_TC008401] [Chromosome: LG4] [Map Location: ] [Description: cuticle protein CP14.6] [Gene Type: protein-coding]","LOC657019; TcasGA2_TC007088 || LOC100142512; TcasGA2_TC008401"]
[571,"NC_007419.2",9980337,"SNV","T","C","Homozygous",24,24,100,1,10,19,0.34,37.92,29,29,14,13,null,1,1,"no","C/C","No",1,92.15,"XP_008192894.1:c.4372A>G","XP_008192894.1:p.Thr1458Ala","LOC103312877",103312877,null,"103312877 [Gene Symbol: LOC103312877] [Locus Tag: TcasGA2_TC007081] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312877] [Gene Type: protein-coding]","TcasGA2_TC007081; LOC103312877; Nasrat"]
[572,"NC_007419.2",10095615,"SNV","G","A","Homozygous",20,20,100,1,8,17,0.32,38.65,25,25,9,10,null,1,1,"no","A/A","No",1,81.68,"XP_015834339.1:c.1774G>A","XP_015834339.1:p.Asp592Asn","LOC100141557",100141557,null,"100141557 [Gene Symbol: LOC100141557] [Locus Tag: TcasGA2_TC008427] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100141557] [Gene Type: protein-coding]","LOC100141557; TcasGA2_TC008427"]
[573,"NC_007419.2",10116192,"SNV","C","T","Homozygous",20,20,100,1,12,10,0.45,37.5,22,22,14,17,null,1,1,"no","T/T","No",1,81.7,"XP_008192826.1:c.239G>A","XP_008192826.1:p.Arg80Lys","LOC103312855",103312855,null,"103312855 [Gene Symbol: LOC103312855] [Locus Tag: TcasGA2_TC032936] [Chromosome: LG4] [Map Location: ] [Description: monocarboxylate transporter 4-like] [Gene Type: protein-coding]","LOC103312855; TcasGA2_TC032936"]
[575,"NC_007419.2",10263584,"SNV","C","G","Heterozygous",9,20,45,1,7,2,0.22,38.78,9,24,5,7,2.92,0.23,0.61,"no","C/G","No",1,71.7,"XP_015834340.1:c.344G>C","XP_015834340.1:p.Gly115Ala","LOC107397719",107397719,null,"107397719 [Gene Symbol: LOC107397719] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: odorant receptor Or1-like] [Gene Type: protein-coding]","LOC107397719"]
[578,"NC_007419.2",11190390,"SNV","T","A","Homozygous",21,21,100,1,6,19,0.24,37.52,25,25,11,11,null,1,1,"no","A/A","No",1,84.7,"XP_974377.1:c.39T>A","XP_974377.1:p.Phe13Leu","LOC663227",663227,null,"663227 [Gene Symbol: LOC663227] [Locus Tag: TcasGA2_TC008478] [Chromosome: LG4] [Map Location: ] [Description: 28S ribosomal protein S27, mitochondrial] [Gene Type: protein-coding]","LOC663227; TcasGA2_TC008478"]
[579,"NC_007419.2","11190395..11190396","MNV","AG","CA","Homozygous",21,21,100,1,6,21,0.22,36.93,27,27,17,15,null,1,1,"no","CA/CA","No",1,200,"XP_974377.1:c.44_45delAGinsCA","XP_974377.1:p.Lys15Thr","LOC663227",663227,null,"663227 [Gene Symbol: LOC663227] [Locus Tag: TcasGA2_TC008478] [Chromosome: LG4] [Map Location: ] [Description: 28S ribosomal protein S27, mitochondrial] [Gene Type: protein-coding]","LOC663227; TcasGA2_TC008478"]
[583,"NC_007419.2",11515892,"SNV","G","A","Homozygous",20,21,95.24,1,16,10,0.38,37.75,26,27,12,13,null,1,1,"no","A/A","No",1,53.18,"XP_015834342.1:c.47C>T","XP_015834342.1:p.Ser16Phe","LOC103312883",103312883,null,"103312883 [Gene Symbol: LOC103312883] [Locus Tag: TcasGA2_TC007022] [Chromosome: LG4] [Map Location: ] [Description: piggyBac transposable element-derived protein 4] [Gene Type: protein-coding]","LOC103312883; TcasGA2_TC007022"]
[584,"NC_007419.2",11557552,"SNV","T","C","Heterozygous",30,45,66.67,1,20,10,0.33,37.8,30,45,14,22,0.61,0.55,0.54,"no","C/T","No",1,78.41,"XP_015835130.1:c.701T>C","XP_015835130.1:p.Val234Ala","LOC107397869",107397869,null,"107397869 [Gene Symbol: LOC107397869] [Locus Tag: TcasGA2_TC032951] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397869] [Gene Type: protein-coding]","LOC107397869; TcasGA2_TC032951"]
[586,"NC_007419.2",11564200,"Deletion","A","-","Homozygous",22,22,100,1,22,0,0,35.32,22,22,12,14,null,1,1,"no","-/-","No",1,96.73,"XP_015835131.1:c.573delA","XP_015835131.1:p.Asn193fs","LOC107397870",107397870,null,"107397870 [Gene Symbol: LOC107397870] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397870] [Gene Type: protein-coding]","LOC107397870"]
[588,"NC_007419.2",11564327,"SNV","A","G","Heterozygous",29,49,59.18,1,15,14,0.48,36.83,29,53,16,16,1.1,0.3,0.89,"no","A/G","No",1,130.78,"XP_015835131.1:c.700A>G","XP_015835131.1:p.Thr234Ala","LOC107397870",107397870,null,"107397870 [Gene Symbol: LOC107397870] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397870] [Gene Type: protein-coding]","LOC107397870"]
[590,"NC_007419.2",11564379,"SNV","T","C","Heterozygous",25,37,67.57,1,16,9,0.36,38.16,25,37,16,19,0.1,0.92,0.92,"no","C/T","No",1,62.54,"XP_015835131.1:c.752T>C","XP_015835131.1:p.Val251Ala","LOC107397870",107397870,null,"107397870 [Gene Symbol: LOC107397870] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397870] [Gene Type: protein-coding]","LOC107397870"]
[591,"NC_007419.2",12159348,"SNV","T","C","Homozygous",20,20,100,1,10,11,0.48,37.4,21,21,11,14,null,1,1,"no","C/C","No",1,80.11,"XP_008192461.1:c.650A>G","XP_008192461.1:p.Asn217Ser","LOC103312771",103312771,null,"103312771 [Gene Symbol: LOC103312771] [Locus Tag: TcasGA2_TC007004] [Chromosome: LG4] [Map Location: ] [Description: TNF receptor-associated factor family protein DDB_G0272829] [Gene Type: protein-coding]","LOC103312771; TcasGA2_TC007004"]
[593,"NC_007420.3",946142,"SNV","G","T","Homozygous",24,24,100,1,20,10,0.33,36.42,30,30,13,12,null,1,1,"no","T/T","No",1,93.74,"XP_015835162.1:c.[83+5125G>T]; XP_015835161.1:c.[1212G>T]","XP_015835161.1:p.Glu404Asp","LOC100142057",100142057,null,"100142057 [Gene Symbol: LOC100142057] [Locus Tag: TcasGA2_TC016312] [Chromosome: LG5] [Map Location: ] [Description: stress response protein NST1] [Gene Type: protein-coding]","LOC100142057; TcasGA2_TC016312"]
[594,"NC_007420.3",1482009,"SNV","C","T","Homozygous",21,21,100,1,15,12,0.44,37.81,27,27,14,14,null,1,1,"no","T/T","No",1,84.7,"XP_001809514.1:c.380G>A","XP_001809514.1:p.Ser127Asn","LOC100141705",100141705,null,"100141705 [Gene Symbol: LOC100141705] [Locus Tag: TcasGA2_TC010910] [Chromosome: LG5] [Map Location: ] [Description: brachyurin] [Gene Type: protein-coding]","LOC100141705; TcasGA2_TC010910; H108"]
[596,"NC_007420.3",1804614,"SNV","T","A","Homozygous",20,20,100,1,16,7,0.3,36.55,23,23,10,12,null,1,1,"no","A/A","No",1,81.69,"XP_008199328.1:c.[896-2854A>T]; XP_015835564.1:c.[57T>A]","XP_015835564.1:p.Asn19Lys","LOC100271908, LOC107397944","100271908 , 107397944",null,"100271908 [Gene Symbol: LOC100271908] [Locus Tag: TcasGA2_TC010897] [Chromosome: LG5] [Map Location: ] [Description: vestigial] [Gene Type: protein-coding] || 107397944 [Gene Symbol: LOC107397944] [Locus Tag: TcasGA2_TC010949] [Chromosome: LG5] [Map Location: ] [Description: kinesin-like protein KIF23] [Gene Type: protein-coding]","TcasGA2_TC010897; LOC100271908; Vg || LOC107397944; TcasGA2_TC010949"]
[597,"NC_007420.3",1804618,"SNV","C","T","Heterozygous",11,21,52.38,1,7,6,0.46,37.45,13,27,5,8,1.97,0.26,1,"no","C/T","No",1,82.62,"XP_008199328.1:c.[896-2858G>A]; XP_015835564.1:c.[61C>T]","XP_015835564.1:p.Pro21Ser","LOC100271908, LOC107397944","100271908 , 107397944",null,"100271908 [Gene Symbol: LOC100271908] [Locus Tag: TcasGA2_TC010897] [Chromosome: LG5] [Map Location: ] [Description: vestigial] [Gene Type: protein-coding] || 107397944 [Gene Symbol: LOC107397944] [Locus Tag: TcasGA2_TC010949] [Chromosome: LG5] [Map Location: ] [Description: kinesin-like protein KIF23] [Gene Type: protein-coding]","TcasGA2_TC010897; LOC100271908; Vg || LOC107397944; TcasGA2_TC010949"]
[598,"NC_007420.3",1908606,"SNV","G","C","Heterozygous",9,25,36,1,3,7,0.3,38.11,10,30,4,5,-1.7,0.06,1,"no","C/G","No",1,57.72,"XP_970755.2:c.2684G>C","XP_970755.2:p.Ser895Thr","LOC659345",659345,null,"659345 [Gene Symbol: LOC659345] [Locus Tag: TcasGA2_TC010952] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC659345] [Gene Type: protein-coding]","TcasGA2_TC010952; LOC659345"]
[601,"NC_007420.3","2570997..2570998","MNV","TC","AT","Heterozygous",11,20,55,1,9,7,0.44,37.36,16,25,9,11,null,0.24,0.9,"no","complex","No",1,200,"XP_015835259.1:c.[369_370delGAinsAT]; XP_015835258.1:c.[369_370delGAinsAT]","XP_015835259.1:p.[Ser124Cys]; XP_015835258.1:p.[Ser124Cys]","LOC103312894",103312894,null,"103312894 [Gene Symbol: LOC103312894] [Locus Tag: TcasGA2_TC013877] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312894] [Gene Type: protein-coding]","LOC103312894; TcasGA2_TC013877"]
[602,"NC_007420.3",2625682,"SNV","C","T","Heterozygous",12,27,44.44,1,10,2,0.17,38.5,12,27,6,10,-0.71,0.92,1,"no","C/T","No",1,90.33,"XP_969328.1:c.607G>A","XP_969328.1:p.Asp203Asn","LOC657800",657800,null,"657800 [Gene Symbol: LOC657800] [Locus Tag: TcasGA2_TC013872] [Chromosome: LG5] [Map Location: ] [Description: vacuolar protein sorting-associated protein 37A] [Gene Type: protein-coding]","TcasGA2_TC013872; LOC657800"]
[603,"NC_007420.3",2645349,"SNV","G","T","Heterozygous",15,23,65.22,1,10,11,0.48,37.93,21,30,5,9,1.1,0.78,1,"no","G/T","No",1,51.25,"XP_008192953.1:c.3957G>T","XP_008192953.1:p.Leu1319Phe","LOC658038",658038,null,"658038 [Gene Symbol: LOC658038] [Locus Tag: TcasGA2_TC013942] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 7] [Gene Type: protein-coding]","LOC658038; TcasGA2_TC013942"]
[605,"NC_007420.3",3139883,"SNV","T","C","Homozygous",23,23,100,1,15,11,0.42,37.04,26,26,14,17,null,1,1,"no","C/C","No",1,89.13,"XP_015835566.1:c.[218A>G]; XP_015835565.1:c.[19+12480T>C]; XP_001810887.1:c.[424+44503T>C]","XP_015835566.1:p.Asn73Ser","LOC659852, LOC107397945","659852 , 107397945",null,"659852 [Gene Symbol: LOC659852] [Locus Tag: TcasGA2_TC013958] [Chromosome: LG5] [Map Location: ] [Description: neuroligin 3] [Gene Type: protein-coding] || 107397945 [Gene Symbol: LOC107397945] [Locus Tag: TcasGA2_TC013846] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC107397945] [Gene Type: protein-coding]","NLG-3; LOC659852; TcasGA2_TC013958 || TcasGA2_TC013846; LOC107397945"]
[606,"NC_007420.3",3311443,"SNV","T","G","Homozygous",21,21,100,1,10,15,0.4,39.29,25,25,8,13,null,1,1,"no","G/G","No",1,83.1,"XP_008192973.1:c.2291T>G","XP_008192973.1:p.Val764Gly","LOC103312902",103312902,null,"103312902 [Gene Symbol: LOC103312902] [Locus Tag: TcasGA2_TC013973] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312902] [Gene Type: protein-coding]","LOC103312902; TcasGA2_TC013973"]
[607,"NC_007420.3",3601454,"SNV","G","A","Homozygous",23,23,100,1,9,21,0.3,37.74,30,30,11,14,null,1,1,"no","A/A","No",1,90.71,"XP_015835221.1:c.172C>T","XP_015835221.1:p.Pro58Ser","LOC656096",656096,null,"656096 [Gene Symbol: LOC656096] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC656096] [Gene Type: protein-coding]","LOC656096"]
[608,"NC_007420.3",3601474,"SNV","A","G","Homozygous",22,23,95.65,1,9,21,0.3,38.68,30,32,10,12,null,1,1,"no","G/G","No",1,57.82,"XP_015835221.1:c.152T>C","XP_015835221.1:p.Val51Ala","LOC656096",656096,null,"656096 [Gene Symbol: LOC656096] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC656096] [Gene Type: protein-coding]","LOC656096"]
[609,"NC_007420.3",3612667,"SNV","A","G","Homozygous",20,20,100,1,10,14,0.42,36.65,24,24,10,11,null,1,1,"no","G/G","No",1,80.09,"XP_008193006.2:c.[142A>G]; XP_001809825.2:c.[560-2825T>C]","XP_008193006.2:p.Ile48Val","LOC100141875, LOC656347","100141875 , 656347",null,"100141875 [Gene Symbol: LOC100141875] [Locus Tag: TcasGA2_TC013816] [Chromosome: LG5] [Map Location: ] [Description: cuticle protein] [Gene Type: protein-coding] || 656347 [Gene Symbol: LOC656347] [Locus Tag: TcasGA2_TC013990] [Chromosome: LG5] [Map Location: ] [Description: cuticle protein 7] [Gene Type: protein-coding]","TcasGA2_TC013816; LOC100141875 || Cuti-4; TcasGA2_TC013990; LOC656347"]
[610,"NC_007420.3",3725059,"SNV","G","C","Heterozygous",12,22,54.55,1,11,4,0.27,36.67,15,27,6,7,-1.48,0.35,0.82,"no","C/G","No",1,78.92,"XP_008193014.1:c.711G>C","XP_008193014.1:p.Leu237Phe","LOC657332",657332,null,"657332 [Gene Symbol: LOC657332] [Locus Tag: TcasGA2_TC013994] [Chromosome: LG5] [Map Location: ] [Description: alpha-1,3/1,6-mannosyltransferase ALG2] [Gene Type: protein-coding]","TcasGA2_TC013994; LOC657332"]
[611,"NC_007420.3",3725272,"SNV","G","A","Heterozygous",12,23,52.17,1,6,6,0.5,36.33,12,23,6,7,-2.37,0.67,0.83,"no","A/G","No",1,89.71,"XP_008193014.1:c.924G>A","XP_008193014.1:p.Met308Ile","LOC657332",657332,null,"657332 [Gene Symbol: LOC657332] [Locus Tag: TcasGA2_TC013994] [Chromosome: LG5] [Map Location: ] [Description: alpha-1,3/1,6-mannosyltransferase ALG2] [Gene Type: protein-coding]","TcasGA2_TC013994; LOC657332"]
[612,"NC_007420.3",3725357,"SNV","C","A","Heterozygous",10,26,38.46,1,6,4,0.4,37,10,27,4,10,-0.24,0.21,1,"no","A/C","No",1,64.21,"XP_008193014.1:c.1009C>A","XP_008193014.1:p.Leu337Ile","LOC657332",657332,null,"657332 [Gene Symbol: LOC657332] [Locus Tag: TcasGA2_TC013994] [Chromosome: LG5] [Map Location: ] [Description: alpha-1,3/1,6-mannosyltransferase ALG2] [Gene Type: protein-coding]","TcasGA2_TC013994; LOC657332"]
[613,"NC_007420.3",3729743,"SNV","G","A","Heterozygous",9,26,34.62,1,7,4,0.36,36,11,30,5,7,-1.75,0.33,0.24,"no","A/G","No",1,55.25,"XP_969040.2:c.1180G>A","XP_969040.2:p.Val394Met","LOC657490",657490,null,"657490 [Gene Symbol: LOC657490] [Locus Tag: TcasGA2_TC013995] [Chromosome: LG5] [Map Location: ] [Description: E3 ubiquitin-protein ligase parkin] [Gene Type: protein-coding]","TcasGA2_TC013995; LOC657490"]
[614,"NC_007420.3",3880872,"SNV","T","G","Homozygous",24,24,100,1,16,10,0.38,38.29,26,26,10,14,null,1,1,"no","G/G","No",1,92.13,"XP_015835500.1:c.[2825A>C]; XP_008193024.1:c.[2825A>C]; XP_015835499.1:c.[2825A>C]; XP_015835502.1:c.[2753A>C]","XP_015835500.1:p.[Asn942Thr]; XP_008193024.1:p.[Asn942Thr]; XP_015835499.1:p.[Asn942Thr]; XP_015835502.1:p.[Asn918Thr]","LOC103312925",103312925,null,"103312925 [Gene Symbol: LOC103312925] [Locus Tag: TcasGA2_TC013796] [Chromosome: LG5] [Map Location: ] [Description: DNA N6-methyl adenine demethylase] [Gene Type: protein-coding]","LOC103312925; TcasGA2_TC013796"]
[617,"NC_007420.3","4030375..4030376","MNV","CG","GT","Homozygous",28,28,100,1,14,23,0.38,38.37,37,37,16,21,null,1,1,"no","GT/GT","No",1,200,"XP_970910.1:c.26_27delCGinsAC","XP_970910.1:p.Thr9Asn","LOC659517",659517,null,"659517 [Gene Symbol: LOC659517] [Locus Tag: TcasGA2_TC013789] [Chromosome: LG5] [Map Location: ] [Description: N-terminal Xaa-Pro-Lys N-methyltransferase 1] [Gene Type: protein-coding]","LOC659517; TcasGA2_TC013789"]
[618,"NC_007420.3",4234878,"SNV","G","A","Homozygous",23,23,100,1,16,9,0.36,37.65,25,25,13,16,null,1,1,"no","A/A","No",1,90.71,"XP_015835355.1:c.[1442G>A]; XP_008193050.1:c.[1442G>A]","XP_015835355.1:p.[Arg481Gln]; XP_008193050.1:p.[Arg481Gln]","LOC103312928",103312928,null,"103312928 [Gene Symbol: LOC103312928] [Locus Tag: TcasGA2_TC014016] [Chromosome: LG5] [Map Location: ] [Description: antigen KI-67] [Gene Type: protein-coding]","LOC103312928; TcasGA2_TC014016"]
[619,"NC_007420.3",4246790,"SNV","T","C","Heterozygous",9,23,39.13,1,3,7,0.3,39.44,10,27,5,6,1.54,0.23,0.76,"no","C/T","No",1,64.63,"XP_008193052.1:c.842T>C","XP_008193052.1:p.Val281Ala","LOC660537",660537,null,"660537 [Gene Symbol: LOC660537] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: protein 60A-like] [Gene Type: protein-coding]","LOC660537"]
[622,"NC_007420.3",4426802,"SNV","C","T","Homozygous",21,21,100,1,17,6,0.26,38.38,23,23,13,18,null,1,1,"no","T/T","No",1,84.7,"XP_008193067.1:c.110C>T","XP_008193067.1:p.Thr37Ile","LOC103312930",103312930,null,"103312930 [Gene Symbol: LOC103312930] [Locus Tag: TcasGA2_TC014025] [Chromosome: LG5] [Map Location: ] [Description: toll-like receptor 3] [Gene Type: protein-coding]","LOC103312930; TcasGA2_TC014025"]
[623,"NC_007420.3",4461410,"SNV","T","A","Homozygous",21,21,100,1,14,13,0.48,37.14,27,27,15,14,null,1,1,"no","A/A","No",1,84.7,"XP_972577.1:c.785A>T","XP_972577.1:p.Lys262Met","LOC661320",661320,null,"661320 [Gene Symbol: LOC661320] [Locus Tag: TcasGA2_TC013773] [Chromosome: LG5] [Map Location: ] [Description: cytochrome P450-like protein] [Gene Type: protein-coding]","TcasGA2_TC013773; LOC661320"]
[624,"NC_007420.3",4481171,"SNV","C","G","Homozygous",27,27,100,1,23,9,0.28,36.52,32,32,23,20,null,1,1,"no","G/G","No",1,101.14,"XP_015835422.1:c.[106G>C]; XP_015835421.1:c.[106G>C]","XP_015835422.1:p.[Glu36Gln]; XP_015835421.1:p.[Glu36Gln]","LOC103312914",103312914,null,"103312914 [Gene Symbol: LOC103312914] [Locus Tag: TcasGA2_TC013771] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312914] [Gene Type: protein-coding]","Or334; LOC103312914; TcasGA2_TC013771"]
[625,"NC_007420.3",4481179,"SNV","A","G","Homozygous",30,30,100,1,22,12,0.35,36.63,34,34,25,22,null,1,1,"no","G/G","No",1,110.18,"XP_015835421.1:c.[98T>C]; XP_015835422.1:c.[98T>C]","XP_015835421.1:p.[Ile33Thr]; XP_015835422.1:p.[Ile33Thr]","LOC103312914",103312914,null,"103312914 [Gene Symbol: LOC103312914] [Locus Tag: TcasGA2_TC013771] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312914] [Gene Type: protein-coding]","Or334; LOC103312914; TcasGA2_TC013771"]
[627,"NC_007420.3",4483865,"SNV","C","T","Homozygous",23,23,100,1,12,12,0.5,38.35,24,24,14,16,null,1,1,"no","T/T","No",1,90.72,"XP_972668.2:c.422G>A","XP_972668.2:p.Arg141Lys","LOC103312914, LOC661418","103312914 , 661418",null,"103312914 [Gene Symbol: LOC103312914] [Locus Tag: TcasGA2_TC013771] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312914] [Gene Type: protein-coding] || 661418 [Gene Symbol: LOC661418] [Locus Tag: TcasGA2_TC013770] [Chromosome: LG5] [Map Location: ] [Description: beta-1,3-galactosyltransferase brn] [Gene Type: protein-coding]","Or334; LOC103312914; TcasGA2_TC013771 || LOC661418; TcasGA2_TC013770"]
[628,"NC_007420.3",4483880,"SNV","G","A","Homozygous",20,20,100,1,10,11,0.48,38.75,21,21,12,13,null,1,1,"no","A/A","No",1,81.69,"XP_972668.2:c.407C>T","XP_972668.2:p.Ser136Leu","LOC103312914, LOC661418","103312914 , 661418",null,"103312914 [Gene Symbol: LOC103312914] [Locus Tag: TcasGA2_TC013771] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312914] [Gene Type: protein-coding] || 661418 [Gene Symbol: LOC661418] [Locus Tag: TcasGA2_TC013770] [Chromosome: LG5] [Map Location: ] [Description: beta-1,3-galactosyltransferase brn] [Gene Type: protein-coding]","Or334; LOC103312914; TcasGA2_TC013771 || LOC661418; TcasGA2_TC013770"]
[629,"NC_007420.3",4618125,"SNV","A","G","Homozygous",22,22,100,1,4,18,0.18,37.41,22,22,11,14,null,1,1,"no","G/G","No",1,86.11,"XP_973105.1:c.310A>G","XP_973105.1:p.Ile104Val","LOC661880",661880,null,"661880 [Gene Symbol: LOC661880] [Locus Tag: TcasGA2_TC014037] [Chromosome: LG5] [Map Location: ] [Description: signal transducing adapter molecule 2] [Gene Type: protein-coding]","LOC661880; TcasGA2_TC014037"]
[630,"NC_007420.3",4678406,"SNV","C","T","Homozygous",21,21,100,1,11,13,0.46,36.71,24,24,10,14,null,1,1,"no","T/T","No",1,84.71,"XP_973328.1:c.[1042C>T]; XP_015835420.1:c.[676C>T]; XP_015835418.1:c.[1054C>T]; XP_015835419.1:c.[1048C>T]; XP_008193094.1:c.[1036C>T]","XP_973328.1:p.[Leu348Phe]; XP_015835420.1:p.[Leu226Phe]; XP_015835418.1:p.[Leu352Phe]; XP_015835419.1:p.[Leu350Phe]; XP_008193094.1:p.[Leu346Phe]","LOC662118",662118,null,"662118 [Gene Symbol: LOC662118] [Locus Tag: TcasGA2_TC014040] [Chromosome: LG5] [Map Location: ] [Description: calcium uptake protein 1 homolog, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC014040; LOC662118"]
[631,"NC_007420.3",4951429,"SNV","C","T","Homozygous",24,24,100,1,8,22,0.27,36.17,30,30,11,12,null,1,1,"no","T/T","No",1,93.74,"XP_008193134.1:c.6085G>A","XP_008193134.1:p.Gly2029Ser","LOC662874",662874,null,"662874 [Gene Symbol: LOC662874] [Locus Tag: TcasGA2_TC013742] [Chromosome: LG5] [Map Location: ] [Description: myosin 7B] [Gene Type: protein-coding]","Myo7B; LOC662874; TcasGA2_TC013742"]
[632,"NC_007420.3",4964139,"SNV","G","C","Homozygous",21,21,100,1,11,10,0.48,37.52,21,21,13,16,null,1,1,"no","C/C","No",1,83.13,"XP_008193135.1:c.2152C>G","XP_008193135.1:p.His718Asp","LOC662902",662902,null,"662902 [Gene Symbol: LOC662902] [Locus Tag: TcasGA2_TC013741] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC662902] [Gene Type: protein-coding]","LOC662902; TcasGA2_TC013741"]
[635,"NC_007420.3","5181857..5181859","Deletion","CAA","-","Heterozygous",9,22,40.91,1,6,3,0.33,35.11,9,24,4,7,null,0.48,0.71,"no","complex","No",1,200,"XP_008193147.1:c.871_873delCAA","XP_008193147.1:p.Gln294del","LOC663351",663351,null,"663351 [Gene Symbol: LOC663351] [Locus Tag: TcasGA2_TC014065] [Chromosome: LG5] [Map Location: ] [Description: transcription factor Sox-3] [Gene Type: protein-coding]","LOC663351; SoxN; TcasGA2_TC014065; SoxNeuro"]
[636,"NC_007420.3",5381092,"SNV","T","A","Homozygous",21,22,95.45,1,7,15,0.32,38.67,22,23,11,13,null,1,1,"no","A/A","No",1,58.42,"XP_966549.1:c.1932T>A","XP_966549.1:p.Asp644Glu","LOC654987",654987,null,"654987 [Gene Symbol: LOC654987] [Locus Tag: TcasGA2_TC014075] [Chromosome: LG5] [Map Location: ] [Description: DNA-directed RNA polymerase III subunit RPC2] [Gene Type: protein-coding]","TcasGA2_TC014075; LOC654987"]
[637,"NC_007420.3","5429198..5429199","MNV","AC","GT","Heterozygous",13,23,56.52,1,7,9,0.44,37.81,16,26,11,14,1.94,0.85,1,"no","complex","No",1,200,"XP_015835278.1:c.[5272_5273delGTinsAC]; XP_015835280.1:c.[1437-4571_1437-4570delGTinsAC]; XP_008193174.2:c.[1556-4571_1556-4570delGTinsAC]","XP_015835278.1:p.Val1758Thr","LOC655359, LOC107397896","655359 , 107397896",null,"655359 [Gene Symbol: LOC655359] [Locus Tag: TcasGA2_TC013716] [Chromosome: LG5] [Map Location: ] [Description: FERM, RhoGEF and pleckstrin domain-containing protein 1] [Gene Type: protein-coding] || 107397896 [Gene Symbol: LOC107397896] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","TcasGA2_TC013716; LOC655359 || LOC107397896"]
[638,"NC_007420.3",5431224,"SNV","G","C","Homozygous",21,21,100,1,6,17,0.26,37.05,23,23,11,12,null,1,1,"no","C/C","No",1,83.12,"XP_008193174.2:c.[1555+3276C>G]; XP_015835280.1:c.[1436+3276C>G]; XP_015835278.1:c.[3247C>G]","XP_015835278.1:p.Leu1083Val","LOC655359, LOC107397896","655359 , 107397896",null,"655359 [Gene Symbol: LOC655359] [Locus Tag: TcasGA2_TC013716] [Chromosome: LG5] [Map Location: ] [Description: FERM, RhoGEF and pleckstrin domain-containing protein 1] [Gene Type: protein-coding] || 107397896 [Gene Symbol: LOC107397896] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","TcasGA2_TC013716; LOC655359 || LOC107397896"]
[639,"NC_007420.3",5463885,"SNV","A","T","Homozygous",21,21,100,1,10,12,0.45,37.29,22,22,16,18,null,1,1,"no","T/T","No",1,84.7,"XP_967422.1:c.2032T>A","XP_967422.1:p.Ser678Thr","LOC655767",655767,null,"655767 [Gene Symbol: LOC655767] [Locus Tag: TcasGA2_TC013713] [Chromosome: LG5] [Map Location: ] [Description: DNA replication licensing factor Mcm7] [Gene Type: protein-coding]","LOC655767; TcasGA2_TC013713"]
[640,"NC_007420.3",5463970,"SNV","T","A","Homozygous",21,21,100,1,14,8,0.36,38.1,22,22,14,15,null,1,1,"no","A/A","No",1,84.7,"XP_967422.1:c.1947A>T","XP_967422.1:p.Glu649Asp","LOC655767",655767,null,"655767 [Gene Symbol: LOC655767] [Locus Tag: TcasGA2_TC013713] [Chromosome: LG5] [Map Location: ] [Description: DNA replication licensing factor Mcm7] [Gene Type: protein-coding]","LOC655767; TcasGA2_TC013713"]
[642,"NC_007420.3",5575327,"SNV","G","C","Homozygous",20,20,100,1,16,12,0.43,36.9,28,28,12,13,null,1,1,"no","C/C","No",1,80.11,"XP_015835557.1:c.[3873G>C]; XP_968748.1:c.[3873G>C]","XP_015835557.1:p.[Glu1291Asp]; XP_968748.1:p.[Glu1291Asp]","LOC657184",657184,null,"657184 [Gene Symbol: LOC657184] [Locus Tag: TcasGA2_TC014092] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","TcasGA2_TC014092; LOC657184"]
[643,"NC_007420.3",5665685,"SNV","A","G","Homozygous",20,20,100,1,9,15,0.38,38.65,24,24,10,11,null,1,1,"no","G/G","No",1,80.09,"XP_008193225.1:c.5282A>G","XP_008193225.1:p.Lys1761Arg","LOC100142258",100142258,null,"100142258 [Gene Symbol: LOC100142258] [Locus Tag: TcasGA2_TC014099] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC100142258] [Gene Type: protein-coding]","TcasGA2_TC014099; LOC100142258"]
[647,"NC_007420.3",5807229,"SNV","A","G","Heterozygous",9,21,42.86,1,5,7,0.42,39.33,12,24,8,7,1.49,0.38,0.98,"no","A/G","No",1,70.03,"XP_008193253.1:c.[959A>G]; XP_008193254.1:c.[54-11717T>C]; XP_015835510.1:c.[54-11717T>C]","XP_008193253.1:p.Glu320Gly","LOC659317, LOC103312989","659317 , 103312989",null,"659317 [Gene Symbol: LOC659317] [Locus Tag: TcasGA2_TC013697] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC659317] [Gene Type: protein-coding] || 103312989 [Gene Symbol: LOC103312989] [Locus Tag: TcasGA2_TC014116] [Chromosome: LG5] [Map Location: ] [Description: carboxypeptidase N subunit 2] [Gene Type: protein-coding]","LOC659317; TcasGA2_TC013697 || LOC103312989; TcasGA2_TC014116"]
[648,"NC_007420.3",5807384,"SNV","C","G","Heterozygous",11,21,52.38,1,2,9,0.18,37.64,11,23,5,7,-0.07,0.79,0.75,"no","C/G","No",1,81.43,"XP_008193254.1:c.[54-11872G>C]; XP_015835510.1:c.[54-11872G>C]; XP_008193253.1:c.[1114C>G]","XP_008193253.1:p.Gln372Glu","LOC659317, LOC103312989","659317 , 103312989",null,"659317 [Gene Symbol: LOC659317] [Locus Tag: TcasGA2_TC013697] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC659317] [Gene Type: protein-coding] || 103312989 [Gene Symbol: LOC103312989] [Locus Tag: TcasGA2_TC014116] [Chromosome: LG5] [Map Location: ] [Description: carboxypeptidase N subunit 2] [Gene Type: protein-coding]","LOC659317; TcasGA2_TC013697 || LOC103312989; TcasGA2_TC014116"]
[649,"NC_007420.3",6044873,"SNV","A","G","Heterozygous",9,23,39.13,1,4,5,0.44,37.11,9,24,3,5,-0.6,0.59,0.99,"no","A/G","No",1,64.36,"XP_971397.2:c.626A>G","XP_971397.2:p.Asn209Ser","LOC660041",660041,null,"660041 [Gene Symbol: LOC660041] [Locus Tag: TcasGA2_TC014124] [Chromosome: LG5] [Map Location: ] [Description: Krueppel-like factor 11] [Gene Type: protein-coding]","LOC660041; TcasGA2_TC014124"]
[650,"NC_007420.3",6057769,"SNV","T","G","Heterozygous",14,24,58.33,1,12,5,0.29,36.57,17,27,5,11,-0.23,0.73,0.84,"no","G/T","No",1,69.95,"XP_008193260.1:c.[692A>C]; XP_008193261.1:c.[692A>C]; XP_015835498.1:c.[692A>C]","XP_008193260.1:p.[Glu231Ala]; XP_008193261.1:p.[Glu231Ala]; XP_015835498.1:p.[Glu231Ala]","LOC660108",660108,null,"660108 [Gene Symbol: LOC660108] [Locus Tag: TcasGA2_TC013686] [Chromosome: LG5] [Map Location: ] [Description: coiled-coil and C2 domain-containing protein 1-like] [Gene Type: protein-coding]","TcasGA2_TC013686; LOC660108"]
[651,"NC_007420.3",6057785,"SNV","A","G","Homozygous",26,26,100,1,23,5,0.18,38.69,28,28,8,19,null,1,1,"no","G/G","No",1,98.15,"XP_008193261.1:c.[676T>C]; XP_008193260.1:c.[676T>C]; XP_015835498.1:c.[676T>C]","XP_008193261.1:p.[Ser226Pro]; XP_008193260.1:p.[Ser226Pro]; XP_015835498.1:p.[Ser226Pro]","LOC660108",660108,null,"660108 [Gene Symbol: LOC660108] [Locus Tag: TcasGA2_TC013686] [Chromosome: LG5] [Map Location: ] [Description: coiled-coil and C2 domain-containing protein 1-like] [Gene Type: protein-coding]","TcasGA2_TC013686; LOC660108"]
[654,"NC_007420.3",6226571,"SNV","T","C","Heterozygous",12,21,57.14,1,12,1,0.08,38.19,13,25,7,8,null,0.69,0.87,"no","complex","No",1,200,"XP_015835373.1:c.[8315T>C]; XP_015835398.1:c.[7325T>C]; XP_015835377.1:c.[8438T>C]; XP_015835380.1:c.[8282T>C]; XP_015835391.1:c.[7916T>C]; XP_015835395.1:c.[7580T>C]; XP_015835396.1:c.[7556T>C]; XP_015835383.1:c.[8192T>C]; XP_015835385.1:c.[8162T>C]; XP_015835387.1:c.[8078T>C]; XP_015835397.1:c.[7469T>C]; XP_015835374.1:c.[8312T>C]; XP_015835378.1:c.[8297T>C]; XP_015835371.1:c.[8438T>C]; XP_015835382.1:c.[8207T>C]; XP_015835369.1:c.[8438T>C]; XP_015835384.1:c.[8171T>C]; XP_015835379.1:c.[8294T>C]; XP_015835394.1:c.[7685T>C]; XP_015835381.1:c.[8228T>C]; XP_015835386.1:c.[8138T>C]; XP_015835390.1:c.[7946T>C]; XP_015835389.1:c.[7952T>C]; XP_015835372.1:c.[8327T>C]; XP_015835392.1:c.[7811T>C]; XP_015835388.1:c.[7961T>C]; XP_015835370.1:c.[8423T>C]; XP_015835399.1:c.[6698T>C]; XP_015835376.1:c.[8312T>C]; XP_015835393.1:c.[7700T>C]","XP_015835373.1:p.[Leu2772Pro]; XP_015835398.1:p.[Leu2442Pro]; XP_015835377.1:p.[Leu2813Pro]; XP_015835380.1:p.[Leu2761Pro]; XP_015835391.1:p.[Leu2639Pro]; XP_015835395.1:p.[Leu2527Pro]; XP_015835396.1:p.[Leu2519Pro]; XP_015835383.1:p.[Leu2731Pro]; XP_015835385.1:p.[Leu2721Pro]; XP_015835387.1:p.[Leu2693Pro]; XP_015835397.1:p.[Leu2490Pro]; XP_015835374.1:p.[Leu2771Pro]; XP_015835378.1:p.[Leu2766Pro]; XP_015835371.1:p.[Leu2813Pro]; XP_015835382.1:p.[Leu2736Pro]; XP_015835369.1:p.[Leu2813Pro]; XP_015835384.1:p.[Leu2724Pro]; XP_015835379.1:p.[Leu2765Pro]; XP_015835394.1:p.[Leu2562Pro]; XP_015835381.1:p.[Leu2743Pro]; XP_015835386.1:p.[Leu2713Pro]; XP_015835390.1:p.[Leu2649Pro]; XP_015835389.1:p.[Leu2651Pro]; XP_015835372.1:p.[Leu2776Pro]; XP_015835392.1:p.[Leu2604Pro]; XP_015835388.1:p.[Leu2654Pro]; XP_015835370.1:p.[Leu2808Pro]; XP_015835399.1:p.[Leu2233Pro]; XP_015835376.1:p.[Leu2771Pro]; XP_015835393.1:p.[Leu2567Pro]","LOC660769",660769,null,"660769 [Gene Symbol: LOC660769] [Locus Tag: TcasGA2_TC030735] [Chromosome: LG5] [Map Location: ] [Description: basement membrane-specific heparan sulfate proteoglycan core protein] [Gene Type: protein-coding]","LOC660769; TcasGA2_TC030735"]
[655,"NC_007420.3","6226571..6226572","MNV","TG","CC","Heterozygous",9,21,42.86,1,9,3,0.25,38.96,12,25,6,7,null,0.95,0.92,"no","complex","No",1,200,"XP_015835398.1:c.[7325_7326delTGinsCC]; XP_015835393.1:c.[7700_7701delTGinsCC]; XP_015835385.1:c.[8162_8163delTGinsCC]; XP_015835377.1:c.[8438_8439delTGinsCC]; XP_015835381.1:c.[8228_8229delTGinsCC]; XP_015835383.1:c.[8192_8193delTGinsCC]; XP_015835378.1:c.[8297_8298delTGinsCC]; XP_015835397.1:c.[7469_7470delTGinsCC]; XP_015835379.1:c.[8294_8295delTGinsCC]; XP_015835369.1:c.[8438_8439delTGinsCC]; XP_015835387.1:c.[8078_8079delTGinsCC]; XP_015835399.1:c.[6698_6699delTGinsCC]; XP_015835386.1:c.[8138_8139delTGinsCC]; XP_015835395.1:c.[7580_7581delTGinsCC]; XP_015835370.1:c.[8423_8424delTGinsCC]; XP_015835384.1:c.[8171_8172delTGinsCC]; XP_015835389.1:c.[7952_7953delTGinsCC]; XP_015835391.1:c.[7916_7917delTGinsCC]; XP_015835394.1:c.[7685_7686delTGinsCC]; XP_015835380.1:c.[8282_8283delTGinsCC]; XP_015835392.1:c.[7811_7812delTGinsCC]; XP_015835388.1:c.[7961_7962delTGinsCC]; XP_015835382.1:c.[8207_8208delTGinsCC]; XP_015835376.1:c.[8312_8313delTGinsCC]; XP_015835371.1:c.[8438_8439delTGinsCC]; XP_015835373.1:c.[8315_8316delTGinsCC]; XP_015835396.1:c.[7556_7557delTGinsCC]; XP_015835374.1:c.[8312_8313delTGinsCC]; XP_015835372.1:c.[8327_8328delTGinsCC]; XP_015835390.1:c.[7946_7947delTGinsCC]","XP_015835398.1:p.[Leu2442Pro]; XP_015835393.1:p.[Leu2567Pro]; XP_015835385.1:p.[Leu2721Pro]; XP_015835377.1:p.[Leu2813Pro]; XP_015835381.1:p.[Leu2743Pro]; XP_015835383.1:p.[Leu2731Pro]; XP_015835378.1:p.[Leu2766Pro]; XP_015835397.1:p.[Leu2490Pro]; XP_015835379.1:p.[Leu2765Pro]; XP_015835369.1:p.[Leu2813Pro]; XP_015835387.1:p.[Leu2693Pro]; XP_015835399.1:p.[Leu2233Pro]; XP_015835386.1:p.[Leu2713Pro]; XP_015835395.1:p.[Leu2527Pro]; XP_015835370.1:p.[Leu2808Pro]; XP_015835384.1:p.[Leu2724Pro]; XP_015835389.1:p.[Leu2651Pro]; XP_015835391.1:p.[Leu2639Pro]; XP_015835394.1:p.[Leu2562Pro]; XP_015835380.1:p.[Leu2761Pro]; XP_015835392.1:p.[Leu2604Pro]; XP_015835388.1:p.[Leu2654Pro]; XP_015835382.1:p.[Leu2736Pro]; XP_015835376.1:p.[Leu2771Pro]; XP_015835371.1:p.[Leu2813Pro]; XP_015835373.1:p.[Leu2772Pro]; XP_015835396.1:p.[Leu2519Pro]; XP_015835374.1:p.[Leu2771Pro]; XP_015835372.1:p.[Leu2776Pro]; XP_015835390.1:p.[Leu2649Pro]","LOC660769",660769,null,"660769 [Gene Symbol: LOC660769] [Locus Tag: TcasGA2_TC030735] [Chromosome: LG5] [Map Location: ] [Description: basement membrane-specific heparan sulfate proteoglycan core protein] [Gene Type: protein-coding]","LOC660769; TcasGA2_TC030735"]
[658,"NC_007420.3","6957284^6957285","Insertion","-","T","Homozygous",21,21,100,1,8,13,0.38,38.57,21,21,10,12,null,1,1,"no","T/T","No",1,84.7,"XP_015835242.1:c.[1357_1358insA]; XP_015835243.1:c.[1249_1250insA]","XP_015835242.1:p.[Thr453fs]; XP_015835243.1:p.[Thr417fs]","LOC103313003",103313003,null,"103313003 [Gene Symbol: LOC103313003] [Locus Tag: TcasGA2_TC013651] [Chromosome: LG5] [Map Location: ] [Description: melanoma-associated antigen E1] [Gene Type: protein-coding]","LOC103313003; TcasGA2_TC013651"]
[659,"NC_007420.3","6957289^6957290","Insertion","-","A","Homozygous",19,20,95,1,6,13,0.32,38.47,19,20,9,11,null,1,1,"no","A/A","No",1,50.16,"XP_015835243.1:c.[1244_1245insT]; XP_015835242.1:c.[1352_1353insT]","XP_015835243.1:p.[Tyr416fs]; XP_015835242.1:p.[Tyr452fs]","LOC103313003",103313003,null,"103313003 [Gene Symbol: LOC103313003] [Locus Tag: TcasGA2_TC013651] [Chromosome: LG5] [Map Location: ] [Description: melanoma-associated antigen E1] [Gene Type: protein-coding]","LOC103313003; TcasGA2_TC013651"]
[660,"NC_007420.3",7111069,"SNV","T","G","Homozygous",22,22,100,1,11,11,0.5,37.18,22,22,15,17,null,1,1,"no","G/G","No",1,86.11,"XP_008193190.1:c.16A>C","XP_008193190.1:p.Ile6Leu","LOC103312976",103312976,null,"103312976 [Gene Symbol: LOC103312976] [Locus Tag: TcasGA2_TC013644] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312976] [Gene Type: protein-coding]","LOC103312976; TcasGA2_TC013644"]
[661,"NC_007420.3",7111078,"SNV","T","C","Homozygous",22,22,100,1,11,11,0.5,37.95,22,22,15,17,null,1,1,"no","C/C","No",1,86.13,"XP_008193190.1:c.7A>G","XP_008193190.1:p.Ile3Val","LOC103312976",103312976,null,"103312976 [Gene Symbol: LOC103312976] [Locus Tag: TcasGA2_TC013644] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312976] [Gene Type: protein-coding]","LOC103312976; TcasGA2_TC013644"]
[662,"NC_007420.3",7143652,"SNV","T","C","Homozygous",21,21,100,1,15,9,0.38,38.05,24,24,15,13,null,1,1,"no","C/C","No",1,83.13,"XP_967786.3:c.1003A>G","XP_967786.3:p.Asn335Asp","LOC656144",656144,null,"656144 [Gene Symbol: LOC656144] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: serpin peptidase inhibitor 6] [Gene Type: protein-coding]","LOC656144; Serpin6"]
[663,"NC_007420.3",7305466,"SNV","A","G","Homozygous",28,29,96.55,1,27,9,0.25,36.29,36,38,9,22,null,0.99,1,"no","G/G","No",1,79.68,"XP_008200429.1:c.[1360T>C]; XP_008200430.1:c.[1360T>C]; XP_015835265.1:c.[1240T>C]; XP_015835266.1:c.[985T>C]; XP_015835263.1:c.[1360T>C]","XP_008200429.1:p.[Ser454Pro]; XP_008200430.1:p.[Ser454Pro]; XP_015835265.1:p.[Ser414Pro]; XP_015835266.1:p.[Ser329Pro]; XP_015835263.1:p.[Ser454Pro]","LOC658981",658981,null,"658981 [Gene Symbol: LOC658981] [Locus Tag: TcasGA2_TC010434] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","TcasGA2_TC010434; LOC658981"]
[664,"NC_007420.3",7308909,"SNV","T","C","Homozygous",22,22,100,1,9,16,0.36,36.32,25,25,9,11,null,1,1,"no","C/C","No",1,86.13,"XP_015835265.1:c.[268A>G]; XP_008200430.1:c.[268A>G]; XP_015835263.1:c.[268A>G]; XP_008200429.1:c.[268A>G]","XP_015835265.1:p.[Ser90Gly]; XP_008200430.1:p.[Ser90Gly]; XP_015835263.1:p.[Ser90Gly]; XP_008200429.1:p.[Ser90Gly]","LOC658981",658981,null,"658981 [Gene Symbol: LOC658981] [Locus Tag: TcasGA2_TC010434] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","TcasGA2_TC010434; LOC658981"]
[665,"NC_007420.3",7323325,"SNV","G","T","Homozygous",20,20,100,1,9,11,0.45,36.4,20,20,10,11,null,1,1,"no","T/T","No",1,81.7,"XP_008200435.1:c.3845C>A","XP_008200435.1:p.Ala1282Asp","LOC659355",659355,null,"659355 [Gene Symbol: LOC659355] [Locus Tag: TcasGA2_TC010431] [Chromosome: LG5] [Map Location: ] [Description: maestro heat-like repeat-containing protein family member 1] [Gene Type: protein-coding]","TcasGA2_TC010431; LOC659355"]
[667,"NC_007420.3",7485028,"SNV","T","C","Homozygous",22,23,95.65,1,15,9,0.38,37.36,24,25,12,14,null,1,1,"no","C/C","No",1,61.21,"XP_008200466.1:c.[863T>C]; XP_972506.1:c.[863T>C]","XP_008200466.1:p.[Met288Thr]; XP_972506.1:p.[Met288Thr]","LOC661238",661238,null,"661238 [Gene Symbol: LOC661238] [Locus Tag: TcasGA2_TC010453] [Chromosome: LG5] [Map Location: ] [Description: PHD finger protein 20] [Gene Type: protein-coding]","LOC661238; TcasGA2_TC010453"]
[669,"NC_007420.3",7600354,"SNV","T","G","Homozygous",21,21,100,1,10,11,0.48,37.76,21,21,14,17,null,1,1,"no","G/G","No",1,83.1,"XP_008200485.1:c.220T>G","XP_008200485.1:p.Ser74Ala","LOC103314938",103314938,null,"103314938 [Gene Symbol: LOC103314938] [Locus Tag: TcasGA2_TC033102] [Chromosome: LG5] [Map Location: ] [Description: nuclear receptor subfamily 2 group E member 1] [Gene Type: protein-coding]","LOC103314938; TcasGA2_TC033102"]
[670,"NC_007420.3",7856085,"SNV","G","A","Homozygous",24,24,100,1,14,10,0.42,38,24,24,12,20,null,1,1,"no","A/A","No",1,93.72,"XP_015835345.1:c.[217G>A]; XP_008200508.1:c.[217G>A]","XP_015835345.1:p.[Asp73Asn]; XP_008200508.1:p.[Asp73Asn]","LOC662427",662427,null,"662427 [Gene Symbol: LOC662427] [Locus Tag: TcasGA2_TC010468] [Chromosome: LG5] [Map Location: ] [Description: fibronectin type-III domain-containing protein 3A] [Gene Type: protein-coding]","LOC662427; TcasGA2_TC010468"]
[671,"NC_007420.3",7990715,"SNV","C","T","Homozygous",31,31,100,1,24,9,0.27,37.39,33,33,11,24,null,1,1,"no","T/T","No",1,114.8,"XP_008193619.1:c.[776C>T]; XP_008193620.1:c.[431C>T]","XP_008193619.1:p.[Ser259Leu]; XP_008193620.1:p.[Ser144Leu]","LOC103313081",103313081,null,"103313081 [Gene Symbol: LOC103313081] [Locus Tag: TcasGA2_TC014252] [Chromosome: LG5] [Map Location: ] [Description: tetratricopeptide repeat protein 25] [Gene Type: protein-coding]","LOC103313081; TcasGA2_TC014252"]
[672,"NC_007420.3",8309917,"SNV","T","A","Homozygous",21,21,100,1,12,13,0.48,39,25,25,10,11,null,1,1,"no","A/A","No",1,84.69,"XP_008193661.1:c.1131A>T","XP_008193661.1:p.Glu377Asp","LOC103313092",103313092,null,"103313092 [Gene Symbol: LOC103313092] [Locus Tag: TcasGA2_TC013535] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313092] [Gene Type: protein-coding]","TcasGA2_TC013535; LOC103313092"]
[673,"NC_007420.3",8507003,"SNV","C","A","Heterozygous",10,21,47.62,1,7,4,0.36,39.5,11,23,6,6,0.95,0.85,0.93,"no","A/C","No",1,78.02,"XP_972170.1:c.1117C>A","XP_972170.1:p.Pro373Thr","LOC660878",660878,null,"660878 [Gene Symbol: LOC660878] [Locus Tag: TcasGA2_TC014290] [Chromosome: LG5] [Map Location: ] [Description: spire] [Gene Type: protein-coding]","TcasGA2_TC014290; spir; LOC660878"]
[674,"NC_007420.3",8596830,"SNV","T","A","Heterozygous",13,22,59.09,1,5,8,0.38,35.92,13,22,8,12,-1.3,0.9,0.93,"no","A/T","No",1,66.24,"XP_972626.2:c.[638T>A]; XP_008193697.1:c.[638T>A]; XP_008193698.1:c.[638T>A]","XP_972626.2:p.[Phe213Tyr]; XP_008193697.1:p.[Phe213Tyr]; XP_008193698.1:p.[Phe213Tyr]","LOC661373",661373,null,"661373 [Gene Symbol: LOC661373] [Locus Tag: TcasGA2_TC014296] [Chromosome: LG5] [Map Location: ] [Description: T-box transcription factor TBX20] [Gene Type: protein-coding]","Tbx20; TcasGA2_TC014296; midline; H15; mid; LOC661373"]
[676,"NC_007420.3",8738742,"SNV","T","C","Homozygous",29,29,100,1,7,23,0.23,38.17,30,30,14,18,null,1,1,"no","C/C","No",1,107.2,"XP_008193713.1:c.[3895A>G]; XP_008193710.1:c.[4045A>G]; XP_015836011.1:c.[3973A>G]; XP_008193712.1:c.[3946A>G]","XP_008193713.1:p.[Ile1299Val]; XP_008193710.1:p.[Ile1349Val]; XP_015836011.1:p.[Ile1325Val]; XP_008193712.1:p.[Ile1316Val]","LOC103313104",103313104,null,"103313104 [Gene Symbol: LOC103313104] [Locus Tag: TcasGA2_TC013501] [Chromosome: LG5] [Map Location: ] [Description: homeotic protein spalt-major] [Gene Type: protein-coding]","spalt; TcasGA2_TC013501; sal; LOC103313104"]
[677,"NC_007420.3",8928505,"SNV","C","T","Homozygous",20,20,100,1,12,10,0.45,37.35,22,22,14,16,null,1,1,"no","T/T","No",1,81.7,"XP_973596.2:c.1124C>T","XP_973596.2:p.Thr375Ile","LOC662406",662406,null,"662406 [Gene Symbol: LOC662406] [Locus Tag: TcasGA2_TC014310] [Chromosome: LG5] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD2] [Gene Type: protein-coding]","TcasGA2_TC014310; LOC662406"]
[678,"NC_007420.3",8928646,"SNV","G","C","Homozygous",21,21,100,1,17,6,0.26,38.05,23,23,12,14,null,1,1,"no","C/C","No",1,83.12,"XP_973596.2:c.1265G>C","XP_973596.2:p.Ser422Thr","LOC662406",662406,null,"662406 [Gene Symbol: LOC662406] [Locus Tag: TcasGA2_TC014310] [Chromosome: LG5] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD2] [Gene Type: protein-coding]","TcasGA2_TC014310; LOC662406"]
[679,"NC_007420.3",8934547,"SNV","C","T","Homozygous",20,20,100,1,6,16,0.27,37.3,22,22,9,11,null,1,1,"no","T/T","No",1,81.7,"XP_008193718.1:c.313G>A","XP_008193718.1:p.Ala105Thr","LOC662444",662444,null,"662444 [Gene Symbol: LOC662444] [Locus Tag: TcasGA2_TC013493] [Chromosome: LG5] [Map Location: ] [Description: kinesin 3C] [Gene Type: protein-coding]","kinesin-3C; TcasGA2_TC013493; LOC662444; Mot; nebbish; tio; neb"]
[680,"NC_007420.3",8934850,"SNV","G","A","Homozygous",27,27,100,1,11,20,0.35,40.11,31,31,9,11,null,1,1,"no","A/A","No",1,102.74,"XP_008193718.1:c.10C>T","XP_008193718.1:p.Pro4Ser","LOC662444",662444,null,"662444 [Gene Symbol: LOC662444] [Locus Tag: TcasGA2_TC013493] [Chromosome: LG5] [Map Location: ] [Description: kinesin 3C] [Gene Type: protein-coding]","kinesin-3C; TcasGA2_TC013493; LOC662444; Mot; nebbish; tio; neb"]
[681,"NC_007420.3",8935582,"SNV","G","A","Homozygous",31,31,100,1,22,9,0.29,39.71,31,31,11,18,null,1,1,"no","A/A","No",1,114.77,"XP_973661.1:c.443G>A","XP_973661.1:p.Arg148Lys","LOC662476",662476,null,"662476 [Gene Symbol: LOC662476] [Locus Tag: TcasGA2_TC014311] [Chromosome: LG5] [Map Location: ] [Description: 39S ribosomal protein L3, mitochondrial] [Gene Type: protein-coding]","LOC662476; TcasGA2_TC014311"]
[682,"NC_007420.3",8968989,"SNV","G","T","Homozygous",22,22,100,1,9,15,0.38,37.18,24,24,14,13,null,1,1,"no","T/T","No",1,87.71,"XP_008193731.1:c.[708C>A]; XP_008193732.1:c.[430-898C>A]","XP_008193731.1:p.Asp236Glu","LOC662848",662848,null,"662848 [Gene Symbol: LOC662848] [Locus Tag: TcasGA2_TC013484] [Chromosome: LG5] [Map Location: ] [Description: gustatory receptor Gr107] [Gene Type: protein-coding]","LOC662848; Gr107; TcasGA2_TC013484"]
[683,"NC_007420.3",8970929,"SNV","G","A","Homozygous",24,24,100,1,10,17,0.37,35.92,27,27,11,17,null,1,1,"no","A/A","No",1,90.71,"XP_008193731.1:c.[190C>T]; XP_008193730.1:c.[190C>T]; XP_008193732.1:c.[190C>T]","XP_008193731.1:p.[Pro64Ser]; XP_008193730.1:p.[Pro64Ser]; XP_008193732.1:p.[Pro64Ser]","LOC662848",662848,null,"662848 [Gene Symbol: LOC662848] [Locus Tag: TcasGA2_TC013484] [Chromosome: LG5] [Map Location: ] [Description: gustatory receptor Gr107] [Gene Type: protein-coding]","LOC662848; Gr107; TcasGA2_TC013484"]
[685,"NC_007420.3",9022843,"SNV","A","C","Homozygous",34,34,100,1,19,19,0.5,37,38,38,17,21,null,1,1,"no","C/C","No",1,122.25,"XP_974097.1:c.222A>C","XP_974097.1:p.Leu74Phe","LOC662935",662935,null,"662935 [Gene Symbol: LOC662935] [Locus Tag: TcasGA2_TC014317] [Chromosome: LG5] [Map Location: ] [Description: spermine oxidase] [Gene Type: protein-coding]","TcasGA2_TC014317; LOC662935"]
[687,"NC_007420.3",9042463,"SNV","A","G","Heterozygous",14,22,63.64,1,10,7,0.41,37.36,17,25,9,10,-2.76,0.95,0.99,"no","A/G","No",1,53.49,"XP_015836120.1:c.2489T>C","XP_015836120.1:p.Ile830Thr","LOC663202",663202,null,"663202 [Gene Symbol: LOC663202] [Locus Tag: TcasGA2_TC030779] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663202] [Gene Type: protein-coding]","LOC663202; TcasGA2_TC030779"]
[688,"NC_007420.3",9089715,"SNV","G","A","Homozygous",22,22,100,1,10,12,0.45,38.14,22,22,11,16,null,1,1,"no","A/A","No",1,87.71,"XP_008193734.1:c.4949C>T","XP_008193734.1:p.Pro1650Leu","LOC103313111",103313111,null,"103313111 [Gene Symbol: LOC103313111] [Locus Tag: TcasGA2_TC013472] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC013472; LOC103313111"]
[689,"NC_007420.3","9090509^9090510","Insertion","-","C","Homozygous",20,20,100,1,14,10,0.42,36.5,24,24,14,17,null,1,1,"no","C/C","No",1,80.11,"XP_008193734.1:c.4204_4205insG","XP_008193734.1:p.Asp1402fs","LOC103313111",103313111,null,"103313111 [Gene Symbol: LOC103313111] [Locus Tag: TcasGA2_TC013472] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC013472; LOC103313111"]
[690,"NC_007420.3",9113516,"SNV","A","T","Homozygous",21,21,100,1,9,14,0.39,38.52,23,23,15,17,null,1,1,"no","T/T","No",1,84.7,"XP_015835630.1:c.2664A>T","XP_015835630.1:p.Gln888His","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[691,"NC_007420.3",9113572,"SNV","C","T","Homozygous",39,39,100,1,29,19,0.4,37.46,48,48,25,29,null,1,1,"no","T/T","No",1,138.75,"XP_015835630.1:c.2720C>T","XP_015835630.1:p.Thr907Ile","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[692,"NC_007420.3","9114200..9114201","MNV","AT","GC","Homozygous",22,22,100,1,17,6,0.26,35.55,23,23,14,18,null,1,1,"no","GC/GC","No",1,200,"XP_015835630.1:c.3348_3349delATinsGC","XP_015835630.1:p.Ser1117Pro","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[694,"NC_007420.3",9115221,"SNV","T","C","Homozygous",20,20,100,1,3,18,0.14,37.8,21,21,9,13,null,1,1,"no","C/C","No",1,80.12,"XP_015835630.1:c.4369T>C","XP_015835630.1:p.Phe1457Leu","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[695,"NC_007420.3",9116121,"SNV","T","G","Homozygous",23,23,100,1,13,16,0.45,36.09,29,29,9,16,null,1,1,"no","G/G","No",1,89.12,"XP_015835630.1:c.5167T>G","XP_015835630.1:p.Ser1723Ala","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[696,"NC_007420.3",9287456,"SNV","A","T","Homozygous",25,25,100,1,9,16,0.36,38.84,25,25,11,15,null,1,1,"no","T/T","No",1,96.74,"XP_001815756.1:c.[706T>A]; XP_008193754.1:c.[706T>A]","XP_001815756.1:p.[Phe236Ile]; XP_008193754.1:p.[Phe236Ile]","LOC100142497",100142497,null,"100142497 [Gene Symbol: LOC100142497] [Locus Tag: TcasGA2_TC013455] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC100142497; TcasGA2_TC013455"]
[697,"NC_007420.3",9477976,"SNV","A","T","Homozygous",20,20,100,1,8,16,0.33,40.15,24,24,16,11,null,1,1,"no","T/T","No",1,81.69,"XP_015835661.1:c.396T>A","XP_015835661.1:p.His132Gln","LOC107397960",107397960,null,"107397960 [Gene Symbol: LOC107397960] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: vanin-like protein 1] [Gene Type: protein-coding]","LOC107397960"]
[698,"NC_007420.3","9857595^9857596","Insertion","-","GGC","Homozygous",24,24,100,1,13,14,0.48,35.66,27,27,15,21,null,1,1,"no","GGC/GGC","No",1,200,"XP_008193555.1:c.[666_667insGCC]; XP_008193553.2:c.[2664_2665insGCC]","XP_008193555.1:p.[Asp222_Ser223insAla]; XP_008193553.2:p.[Asp888_Ser889insAla]","LOC658870, LOC658940","658870 , 658940",null,"658870 [Gene Symbol: LOC658870] [Locus Tag: TcasGA2_TC013423] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC658870] [Gene Type: protein-coding] || 658940 [Gene Symbol: LOC658940] [Locus Tag: TcasGA2_TC013424] [Chromosome: LG5] [Map Location: ] [Description: Golgi integral membrane protein 4] [Gene Type: protein-coding]","LOC658870; TcasGA2_TC013423 || LOC658940; TcasGA2_TC013424"]
[699,"NC_007420.3","9959028..9959029","MNV","TA","CG","Homozygous",22,22,100,1,12,11,0.48,37.95,23,23,16,15,null,1,1,"no","CG/CG","No",1,200,"XP_015836094.1:c.[54_55delTAinsCG]; XP_015836093.1:c.[54_55delTAinsCG]","XP_015836094.1:p.[Ile19Val]; XP_015836093.1:p.[Ile19Val]","LOC660416",660416,null,"660416 [Gene Symbol: LOC660416] [Locus Tag: TcasGA2_TC014381] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC660416; TcasGA2_TC014381"]
[700,"NC_007420.3",9959172,"SNV","C","A","Homozygous",20,20,100,1,14,8,0.36,36.4,22,22,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_015836094.1:c.[148C>A]; XP_015836093.1:c.[148C>A]","XP_015836094.1:p.[Pro50Thr]; XP_015836093.1:p.[Pro50Thr]","LOC660416",660416,null,"660416 [Gene Symbol: LOC660416] [Locus Tag: TcasGA2_TC014381] [Chromosome: LG5] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC660416; TcasGA2_TC014381"]
[701,"NC_007420.3",9965268,"SNV","C","T","Homozygous",20,20,100,1,9,13,0.41,37.8,22,22,12,14,null,1,1,"no","T/T","No",1,81.7,"XP_008193591.1:c.1370C>T","XP_008193591.1:p.Thr457Ile","LOC103313070",103313070,null,"103313070 [Gene Symbol: LOC103313070] [Locus Tag: TcasGA2_TC014382] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","TcasGA2_TC014382; LOC103313070"]
[702,"NC_007420.3",9976166,"SNV","G","C","Homozygous",24,24,100,1,20,8,0.29,38.04,28,28,12,20,null,1,1,"no","C/C","No",1,92.15,"XP_015836126.1:c.[3092G>C]; XP_015836125.1:c.[3092G>C]","XP_015836126.1:p.[Arg1031Pro]; XP_015836125.1:p.[Arg1031Pro]","LOC660599",660599,null,"660599 [Gene Symbol: LOC660599] [Locus Tag: TcasGA2_TC014384] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660599; TcasGA2_TC014384"]
[703,"NC_007420.3",9976170,"SNV","G","T","Homozygous",23,23,100,1,19,8,0.3,37.78,27,27,12,19,null,1,1,"no","T/T","No",1,90.72,"XP_015836125.1:c.[3096G>T]; XP_015836126.1:c.[3096G>T]","XP_015836125.1:p.[Gln1032His]; XP_015836126.1:p.[Gln1032His]","LOC660599",660599,null,"660599 [Gene Symbol: LOC660599] [Locus Tag: TcasGA2_TC014384] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660599; TcasGA2_TC014384"]
[704,"NC_007420.3",9976745,"SNV","G","A","Homozygous",21,21,100,1,9,13,0.41,39.95,22,22,12,13,null,1,1,"no","A/A","No",1,84.7,"XP_015836126.1:c.[3671G>A]; XP_015836125.1:c.[3671G>A]","XP_015836126.1:p.[Ser1224Asn]; XP_015836125.1:p.[Ser1224Asn]","LOC660599",660599,null,"660599 [Gene Symbol: LOC660599] [Locus Tag: TcasGA2_TC014384] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660599; TcasGA2_TC014384"]
[705,"NC_007420.3",9976757,"SNV","C","T","Homozygous",20,20,100,1,9,15,0.38,37.2,24,24,13,12,null,1,1,"no","T/T","No",1,81.69,"XP_015836125.1:c.[3683C>T]; XP_015836126.1:c.[3683C>T]","XP_015836125.1:p.[Ala1228Val]; XP_015836126.1:p.[Ala1228Val]","LOC660599",660599,null,"660599 [Gene Symbol: LOC660599] [Locus Tag: TcasGA2_TC014384] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660599; TcasGA2_TC014384"]
[706,"NC_007420.3",9998419,"SNV","A","C","Homozygous",20,20,100,1,18,6,0.25,39.2,24,24,12,9,null,1,1,"no","C/C","No",1,80.12,"XP_015835865.1:c.[1236A>C]; XP_008193575.1:c.[1236A>C]","XP_015835865.1:p.[Leu412Phe]; XP_008193575.1:p.[Leu412Phe]","LOC103313062",103313062,null,"103313062 [Gene Symbol: LOC103313062] [Locus Tag: TcasGA2_TC014390] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313062] [Gene Type: protein-coding]","TcasGA2_TC014390; P149; LOC103313062"]
[707,"NC_007420.3",9998433,"SNV","C","G","Homozygous",20,20,100,1,18,8,0.31,36.85,26,26,12,10,null,1,1,"no","G/G","No",1,80.09,"XP_015835865.1:c.[1250C>G]; XP_008193575.1:c.[1250C>G]","XP_015835865.1:p.[Thr417Arg]; XP_008193575.1:p.[Thr417Arg]","LOC103313062",103313062,null,"103313062 [Gene Symbol: LOC103313062] [Locus Tag: TcasGA2_TC014390] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313062] [Gene Type: protein-coding]","TcasGA2_TC014390; P149; LOC103313062"]
[708,"NC_007420.3",9998508,"SNV","C","T","Homozygous",21,21,100,1,14,9,0.39,37.33,23,23,11,15,null,1,1,"no","T/T","No",1,84.71,"XP_015835865.1:c.[1325C>T]; XP_008193575.1:c.[1325C>T]","XP_015835865.1:p.[Thr442Ile]; XP_008193575.1:p.[Thr442Ile]","LOC103313062",103313062,null,"103313062 [Gene Symbol: LOC103313062] [Locus Tag: TcasGA2_TC014390] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313062] [Gene Type: protein-coding]","TcasGA2_TC014390; P149; LOC103313062"]
[709,"NC_007420.3",10006447,"SNV","C","G","Homozygous",20,20,100,1,14,9,0.39,37.9,23,23,10,13,null,1,1,"no","G/G","No",1,80.09,"XP_972374.2:c.350C>G","XP_972374.2:p.Ala117Gly","LOC661049, LOC661098","661049 , 661098",null,"661049 [Gene Symbol: LOC661049] [Locus Tag: TcasGA2_TC013413] [Chromosome: LG5] [Map Location: ] [Description: beta-lactamase-like protein 2 homolog] [Gene Type: protein-coding] || 661098 [Gene Symbol: LOC661098] [Locus Tag: TcasGA2_TC014392] [Chromosome: LG5] [Map Location: ] [Description: protein D2] [Gene Type: protein-coding]","TcasGA2_TC013413; LOC661049 || LOC661098; TcasGA2_TC014392"]
[710,"NC_007420.3",10038188,"SNV","G","A","Homozygous",20,20,100,1,16,10,0.38,38.35,26,26,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_008193579.1:c.4858C>T","XP_008193579.1:p.Pro1620Ser","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[711,"NC_007420.3",10038191,"SNV","G","C","Homozygous",20,20,100,1,16,10,0.38,37.7,26,26,10,14,null,1,1,"no","C/C","No",1,80.11,"XP_008193579.1:c.4855C>G","XP_008193579.1:p.Arg1619Gly","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[712,"NC_007420.3",10038196,"SNV","G","A","Homozygous",20,20,100,1,15,10,0.4,38,25,25,10,14,null,1,1,"no","A/A","No",1,78.68,"XP_008193579.1:c.4850C>T","XP_008193579.1:p.Ala1617Val","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[713,"NC_007420.3",10040659,"SNV","G","T","Homozygous",21,21,100,1,17,4,0.19,37.67,21,21,9,16,null,1,1,"no","T/T","No",1,84.7,"XP_008193579.1:c.2545C>A","XP_008193579.1:p.Pro849Thr","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[714,"NC_007420.3",10040704,"SNV","C","A","Homozygous",27,27,100,1,20,12,0.38,37.74,32,32,13,21,null,1,1,"no","A/A","No",1,102.75,"XP_008193579.1:c.2500G>T","XP_008193579.1:p.Val834Phe","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[715,"NC_007420.3",10040740,"SNV","A","G","Homozygous",21,21,100,1,10,15,0.4,38.48,25,25,11,16,null,1,1,"no","G/G","No",1,83.1,"XP_008193579.1:c.2464T>C","XP_008193579.1:p.*822Arg","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[716,"NC_007420.3",10163369,"SNV","A","C","Homozygous",30,30,100,1,21,11,0.34,38.4,32,32,12,18,null,1,1,"no","C/C","No",1,110.21,"XP_015835805.1:c.2353A>C","XP_015835805.1:p.Thr785Pro","LOC662374",662374,null,"662374 [Gene Symbol: LOC662374] [Locus Tag: TcasGA2_TC014404] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC662374] [Gene Type: protein-coding]","TcasGA2_TC014404; LOC662374"]
[717,"NC_007420.3",10163958,"SNV","C","T","Homozygous",22,22,100,1,14,10,0.42,37.77,24,24,14,16,null,1,1,"no","T/T","No",1,87.71,"XP_015835805.1:c.2749C>T","XP_015835805.1:p.Leu917Phe","LOC662374",662374,null,"662374 [Gene Symbol: LOC662374] [Locus Tag: TcasGA2_TC014404] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC662374] [Gene Type: protein-coding]","TcasGA2_TC014404; LOC662374"]
[718,"NC_007420.3",10174924,"SNV","A","G","Homozygous",25,25,100,1,11,19,0.37,37.6,30,30,13,12,null,1,1,"no","G/G","No",1,95.14,"XP_015835840.1:c.[484T>C]; XP_973728.1:c.[532T>C]","XP_015835840.1:p.[Phe162Leu]; XP_973728.1:p.[Phe178Leu]","LOC662545",662545,null,"662545 [Gene Symbol: LOC662545] [Locus Tag: TcasGA2_TC013393] [Chromosome: LG5] [Map Location: ] [Description: dolichyldiphosphatase 1] [Gene Type: protein-coding]","TcasGA2_TC013393; LOC662545"]
[719,"NC_007420.3",10194572,"SNV","G","A","Homozygous",24,24,100,1,11,13,0.46,38.92,24,24,15,19,null,1,1,"no","A/A","No",1,93.72,"XP_008193838.1:c.[1338-67C>T]; XP_015835810.1:c.[1455-67C>T]; XP_008193837.1:c.[22G>A]; XP_015835811.1:c.[1410-67C>T]","XP_008193837.1:p.Gly8Ser","LOC662674, LOC662642, LOC103313142","662674 , 662642 , 103313142",null,"662674 [Gene Symbol: LOC662674] [Locus Tag: TcasGA2_TC014410] [Chromosome: LG5] [Map Location: ] [Description: guanine nucleotide-binding protein subunit beta-2] [Gene Type: protein-coding] || 662642 [Gene Symbol: LOC662642] [Locus Tag: TcasGA2_TC013390] [Chromosome: LG5] [Map Location: ] [Description: procollagen-lysine,2-oxoglutarate 5-dioxygenase 1] [Gene Type: protein-coding] || 103313142 [Gene Symbol: LOC103313142] [Locus Tag: TcasGA2_TC014408] [Chromosome: LG5] [Map Location: ] [Description: immunoglobulin domain-containing protein oig-1] [Gene Type: protein-coding]","LOC662674; TcasGA2_TC014410 || TcasGA2_TC013390; LOC662642 || TcasGA2_TC014408; LOC103313142"]
[720,"NC_007420.3",10202200,"SNV","G","A","Homozygous",20,20,100,1,7,13,0.35,38.65,20,20,9,8,null,1,1,"no","A/A","No",1,81.69,"XP_973883.2:c.584C>T","XP_973883.2:p.Ala195Val","LOC662707",662707,null,"662707 [Gene Symbol: LOC662707] [Locus Tag: TcasGA2_TC013389] [Chromosome: LG5] [Map Location: ] [Description: leukocyte elastase inhibitor] [Gene Type: protein-coding]","LOC662707; serpin29; TcasGA2_TC013389"]
[721,"NC_007420.3",10216410,"Deletion","G","-","Homozygous",24,24,100,1,10,14,0.42,35.62,24,24,13,17,null,1,1,"no","-/-","No",1,102.75,"XP_008193848.2:c.181delC","XP_008193848.2:p.Arg61fs","LOC103313143",103313143,null,"103313143 [Gene Symbol: LOC103313143] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313143] [Gene Type: protein-coding]","LOC103313143"]
[722,"NC_007420.3",10218273,"SNV","T","C","Homozygous",20,20,100,1,10,15,0.4,37.95,25,25,12,15,null,1,1,"no","C/C","No",1,80.11,"XP_973990.1:c.289A>G","XP_973990.1:p.Ile97Val","LOC662820",662820,null,"662820 [Gene Symbol: LOC662820] [Locus Tag: TcasGA2_TC013385] [Chromosome: LG5] [Map Location: ] [Description: GDP-fucose protein O-fucosyltransferase 1] [Gene Type: protein-coding]","TcasGA2_TC013385; LOC662820"]
[723,"NC_007420.3","10250740..10250741","MNV","CG","TA","Homozygous",21,21,100,1,11,14,0.44,35.27,25,25,14,16,null,1,1,"no","TA/TA","No",1,200,"XP_008193854.1:c.852_853delCGinsTA","XP_008193854.1:p.Val285Ile","LOC663179",663179,null,"663179 [Gene Symbol: LOC663179] [Locus Tag: TcasGA2_TC014420] [Chromosome: LG5] [Map Location: ] [Description: extended synaptotagmin-like protein 2b] [Gene Type: protein-coding]","TcasGA2_TC014420; LOC663179; Esyt2b"]
[724,"NC_007420.3",10252447,"SNV","G","A","Homozygous",21,21,100,1,10,15,0.4,37.05,25,25,9,12,null,1,1,"no","A/A","No",1,84.7,"XP_008193854.1:c.2195G>A","XP_008193854.1:p.Gly732Glu","LOC663179",663179,null,"663179 [Gene Symbol: LOC663179] [Locus Tag: TcasGA2_TC014420] [Chromosome: LG5] [Map Location: ] [Description: extended synaptotagmin-like protein 2b] [Gene Type: protein-coding]","TcasGA2_TC014420; LOC663179; Esyt2b"]
[725,"NC_007420.3",10255494,"SNV","A","G","Homozygous",21,21,100,1,13,11,0.46,37.48,24,24,11,13,null,1,1,"no","G/G","No",1,83.1,"XP_015835816.1:c.[1675A>G]; XP_015835815.1:c.[1675A>G]; XP_015835814.1:c.[1675A>G]; XP_008193857.1:c.[1675A>G]","XP_015835816.1:p.[Lys559Glu]; XP_015835815.1:p.[Lys559Glu]; XP_015835814.1:p.[Lys559Glu]; XP_008193857.1:p.[Lys559Glu]","LOC663203",663203,null,"663203 [Gene Symbol: LOC663203] [Locus Tag: TcasGA2_TC014421] [Chromosome: LG5] [Map Location: ] [Description: extended synaptotagmin-like protein 2c] [Gene Type: protein-coding]","LOC663203; Esyt2c; GLEAN_14421; TcasGA2_TC014421"]
[726,"NC_007420.3",10257294,"SNV","C","T","Homozygous",26,26,100,1,18,11,0.38,36.12,29,29,15,13,null,1,1,"no","T/T","No",1,99.74,"XP_008193906.1:c.199G>A","XP_008193906.1:p.Ala67Thr","LOC103313160",103313160,null,"103313160 [Gene Symbol: LOC103313160] [Locus Tag: TcasGA2_TC013380] [Chromosome: LG5] [Map Location: ] [Description: gastrula zinc finger protein XlCGF8.2DB] [Gene Type: protein-coding]","TcasGA2_TC013380; LOC103313160"]
[727,"NC_007420.3",10257296,"SNV","T","C","Homozygous",26,26,100,1,19,10,0.34,36.46,29,29,14,12,null,1,1,"no","C/C","No",1,98.17,"XP_008193906.1:c.197A>G","XP_008193906.1:p.His66Arg","LOC103313160",103313160,null,"103313160 [Gene Symbol: LOC103313160] [Locus Tag: TcasGA2_TC013380] [Chromosome: LG5] [Map Location: ] [Description: gastrula zinc finger protein XlCGF8.2DB] [Gene Type: protein-coding]","TcasGA2_TC013380; LOC103313160"]
[728,"NC_007420.3",10278393,"SNV","A","G","Homozygous",30,30,100,1,9,22,0.29,36.47,31,31,14,18,null,1,1,"no","G/G","No",1,110.19,"XP_008193882.1:c.[866A>G]; XP_015835803.1:c.[866A>G]; XP_015835804.1:c.[866A>G]","XP_008193882.1:p.[Asp289Gly]; XP_015835803.1:p.[Asp289Gly]; XP_015835804.1:p.[Asp289Gly]","LOC663311",663311,null,"663311 [Gene Symbol: LOC663311] [Locus Tag: TcasGA2_TC014424] [Chromosome: LG5] [Map Location: ] [Description: regulating synaptic membrane exocytosis protein 2] [Gene Type: protein-coding]","LOC663311; TcasGA2_TC014424"]
[729,"NC_007420.3",10314258,"SNV","A","G","Homozygous",26,26,100,1,24,4,0.14,38.23,28,28,10,21,null,1,1,"no","G/G","No",1,98.14,"XP_974527.1:c.899T>C","XP_974527.1:p.Val300Ala","LOC663383",663383,null,"663383 [Gene Symbol: LOC663383] [Locus Tag: TcasGA2_TC013377] [Chromosome: LG5] [Map Location: ] [Description: exostosin-3] [Gene Type: protein-coding]","LOC663383; TcasGA2_TC013377"]
[730,"NC_007420.3",10314330,"SNV","T","C","Homozygous",21,21,100,1,20,10,0.33,35.86,30,30,6,17,null,1,1,"no","C/C","No",1,83.12,"XP_974527.1:c.827A>G","XP_974527.1:p.Gln276Arg","LOC663383",663383,null,"663383 [Gene Symbol: LOC663383] [Locus Tag: TcasGA2_TC013377] [Chromosome: LG5] [Map Location: ] [Description: exostosin-3] [Gene Type: protein-coding]","LOC663383; TcasGA2_TC013377"]
[731,"NC_007420.3",10414738,"SNV","G","A","Homozygous",24,24,100,1,15,12,0.44,38.58,27,27,13,15,null,1,1,"no","A/A","No",1,93.72,"XP_008193873.1:c.56C>T","XP_008193873.1:p.Pro19Leu","LOC103313148",103313148,null,"103313148 [Gene Symbol: LOC103313148] [Locus Tag: TcasGA2_TC013371] [Chromosome: LG5] [Map Location: ] [Description: jmjC domain-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC013371; LOC103313148"]
[734,"NC_007420.3",10454874,"SNV","G","C","Homozygous",20,20,100,1,14,7,0.33,37.35,21,21,10,14,null,1,1,"no","C/C","No",1,80.12,"XP_015835800.1:c.[6402-311G>C]; XP_015835799.1:c.[6570+152G>C]; XP_015835798.1:c.[6511G>C]","XP_015835798.1:p.Asp2171His","LOC663619",663619,null,"663619 [Gene Symbol: LOC663619] [Locus Tag: TcasGA2_TC014438] [Chromosome: LG5] [Map Location: ] [Description: nucleoprotein TPR] [Gene Type: protein-coding]","LOC663619; TcasGA2_TC014438"]
[735,"NC_007420.3",10455569,"SNV","T","A","Heterozygous",16,26,61.54,1,10,9,0.47,36.62,19,32,10,12,-1.53,0.92,1,"no","A/T","No",1,70.65,"XP_976459.1:c.426A>T","XP_976459.1:p.Arg142Ser","LOC663636",663636,null,"663636 [Gene Symbol: LOC663636] [Locus Tag: TcasGA2_TC013366] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663636] [Gene Type: protein-coding]","LOC663636; TcasGA2_TC013366"]
[736,"NC_007420.3",10455580,"SNV","A","G","Homozygous",33,35,94.29,1,17,19,0.47,38.82,36,38,19,22,null,0.99,1,"no","G/G","No",1,64.19,"XP_976459.1:c.415T>C","XP_976459.1:p.Ser139Pro","LOC663636",663636,null,"663636 [Gene Symbol: LOC663636] [Locus Tag: TcasGA2_TC013366] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663636] [Gene Type: protein-coding]","LOC663636; TcasGA2_TC013366"]
[737,"NC_007420.3",10455601,"SNV","T","C","Heterozygous",18,31,58.06,1,9,12,0.43,38.78,21,34,10,12,-0.22,0.69,1,"no","C/T","No",1,91.79,"XP_976459.1:c.394A>G","XP_976459.1:p.Ile132Val","LOC663636",663636,null,"663636 [Gene Symbol: LOC663636] [Locus Tag: TcasGA2_TC013366] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663636] [Gene Type: protein-coding]","LOC663636; TcasGA2_TC013366"]
[738,"NC_007420.3",10671888,"SNV","C","T","Homozygous",26,26,100,1,6,20,0.23,35.35,26,26,16,16,null,1,1,"no","T/T","No",1,99.75,"XP_015835806.1:c.298G>A","XP_015835806.1:p.Ala100Thr","LOC663878",663878,null,"663878 [Gene Symbol: LOC663878] [Locus Tag: TcasGA2_TC013351] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663878] [Gene Type: protein-coding]","LOC663878; TcasGA2_TC013351"]
[739,"NC_007420.3",10673050,"SNV","C","A","Homozygous",20,20,100,1,10,12,0.45,36.35,22,22,12,12,null,1,1,"no","A/A","No",1,81.69,"XP_008193897.1:c.1884G>T","XP_008193897.1:p.Lys628Asn","LOC103313157",103313157,null,"103313157 [Gene Symbol: LOC103313157] [Locus Tag: TcasGA2_TC013350] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein DZIP1L] [Gene Type: protein-coding]","TcasGA2_TC013350; LOC103313157"]
[740,"NC_007420.3",10673463,"SNV","T","A","Homozygous",20,20,100,1,17,5,0.23,38.45,22,22,13,13,null,1,1,"no","A/A","No",1,81.69,"XP_008193897.1:c.1516A>T","XP_008193897.1:p.Met506Leu","LOC103313157",103313157,null,"103313157 [Gene Symbol: LOC103313157] [Locus Tag: TcasGA2_TC013350] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein DZIP1L] [Gene Type: protein-coding]","TcasGA2_TC013350; LOC103313157"]
[741,"NC_007420.3","10673535..10673536","MNV","TA","CC","Homozygous",20,20,100,1,11,13,0.46,38.2,24,24,18,17,null,1,1,"no","CC/CC","No",1,200,"XP_008193897.1:c.1443_1444delTAinsGG","XP_008193897.1:p.Asn481_Ile482delinsLysVal","LOC103313157",103313157,null,"103313157 [Gene Symbol: LOC103313157] [Locus Tag: TcasGA2_TC013350] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein DZIP1L] [Gene Type: protein-coding]","TcasGA2_TC013350; LOC103313157"]
[742,"NC_007420.3",10692654,"SNV","G","A","Homozygous",21,21,100,1,14,10,0.42,36.86,24,24,13,16,null,1,1,"no","A/A","No",1,84.7,"XP_008193900.1:c.2447C>T","XP_008193900.1:p.Ala816Val","LOC663972",663972,null,"663972 [Gene Symbol: LOC663972] [Locus Tag: TcasGA2_TC013347] [Chromosome: LG5] [Map Location: ] [Description: DNA repair protein complementing XP-G cells homolog] [Gene Type: protein-coding]","TcasGA2_TC013347; LOC663972"]
[743,"NC_007420.3",10693592,"SNV","T","C","Homozygous",25,25,100,1,7,19,0.27,38.12,26,26,11,13,null,1,1,"no","C/C","No",1,95.16,"XP_008193900.1:c.1561A>G","XP_008193900.1:p.Ile521Val","LOC663972",663972,null,"663972 [Gene Symbol: LOC663972] [Locus Tag: TcasGA2_TC013347] [Chromosome: LG5] [Map Location: ] [Description: DNA repair protein complementing XP-G cells homolog] [Gene Type: protein-coding]","TcasGA2_TC013347; LOC663972"]
[744,"NC_007420.3",10693594,"SNV","G","A","Homozygous",22,22,100,1,7,16,0.3,38.32,23,23,10,11,null,1,1,"no","A/A","No",1,87.71,"XP_008193900.1:c.1559C>T","XP_008193900.1:p.Ser520Phe","LOC663972",663972,null,"663972 [Gene Symbol: LOC663972] [Locus Tag: TcasGA2_TC013347] [Chromosome: LG5] [Map Location: ] [Description: DNA repair protein complementing XP-G cells homolog] [Gene Type: protein-coding]","TcasGA2_TC013347; LOC663972"]
[745,"NC_007420.3",10693634,"SNV","C","T","Homozygous",27,27,100,1,11,16,0.41,39.52,27,27,14,16,null,1,1,"no","T/T","No",1,102.75,"XP_008193900.1:c.1519G>A","XP_008193900.1:p.Glu507Lys","LOC663972",663972,null,"663972 [Gene Symbol: LOC663972] [Locus Tag: TcasGA2_TC013347] [Chromosome: LG5] [Map Location: ] [Description: DNA repair protein complementing XP-G cells homolog] [Gene Type: protein-coding]","TcasGA2_TC013347; LOC663972"]
[746,"NC_007420.3",10920804,"SNV","C","T","Homozygous",20,20,100,1,5,16,0.24,37.75,21,21,11,11,null,1,1,"no","T/T","No",1,81.7,"XP_966996.1:c.40G>A","XP_966996.1:p.Val14Ile","LOC655363",655363,null,"655363 [Gene Symbol: LOC655363] [Locus Tag: TcasGA2_TC013339] [Chromosome: LG5] [Map Location: ] [Description: EGF domain-specific O-linked N-acetylglucosamine transferase] [Gene Type: protein-coding]","TcasGA2_TC013339; LOC655363"]
[747,"NC_007420.3",11080395,"SNV","A","C","Homozygous",21,21,100,1,4,20,0.17,37.71,24,24,11,12,null,1,1,"no","C/C","No",1,83.13,"XP_008193918.1:c.[401A>C]; XP_015835845.1:c.[390+11A>C]","XP_008193918.1:p.Gln134Pro","LOC656765, LOC656853","656765 , 656853",null,"656765 [Gene Symbol: LOC656765] [Locus Tag: TcasGA2_TC014486] [Chromosome: LG5] [Map Location: ] [Description: general odorant-binding protein 69a] [Gene Type: protein-coding] || 656853 [Gene Symbol: LOC656853] [Locus Tag: TcasGA2_TC013322] [Chromosome: LG5] [Map Location: ] [Description: general odorant-binding protein 83a] [Gene Type: protein-coding]","LOC656765; TcasGA2_TC014486; OBP08 || OBP06; TcasGA2_TC013322; OBP07; LOC656853"]
[748,"NC_007420.3",11080424,"Deletion","T","-","Homozygous",22,22,100,1,2,22,0.08,39.23,24,24,11,13,null,1,1,"no","-/-","No",1,96.73,"XP_015835845.1:c.[391-10delT]; XP_008193918.1:c.[430delT]","XP_008193918.1:p.Ser146fs","LOC656765, LOC656853","656765 , 656853",null,"656765 [Gene Symbol: LOC656765] [Locus Tag: TcasGA2_TC014486] [Chromosome: LG5] [Map Location: ] [Description: general odorant-binding protein 69a] [Gene Type: protein-coding] || 656853 [Gene Symbol: LOC656853] [Locus Tag: TcasGA2_TC013322] [Chromosome: LG5] [Map Location: ] [Description: general odorant-binding protein 83a] [Gene Type: protein-coding]","LOC656765; TcasGA2_TC014486; OBP08 || OBP06; TcasGA2_TC013322; OBP07; LOC656853"]
[749,"NC_007420.3",11159717,"SNV","A","G","Homozygous",23,23,100,1,12,12,0.5,36.04,24,24,14,18,null,1,1,"no","G/G","No",1,89.12,"XP_015835632.1:c.4921A>G","XP_015835632.1:p.Ser1641Gly","LOC657413",657413,null,"657413 [Gene Symbol: LOC657413] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: hydrocephalus-inducing protein-like] [Gene Type: protein-coding]","LOC657413"]
[750,"NC_007420.3",11184778,"SNV","T","G","Homozygous",21,21,100,1,16,5,0.24,37.62,21,21,12,18,null,1,1,"no","G/G","No",1,83.09,"XP_015835756.1:c.[3993T>G]; XP_008193949.1:c.[3993T>G]; XP_015835757.1:c.[3993T>G]","XP_015835756.1:p.[Asp1331Glu]; XP_008193949.1:p.[Asp1331Glu]; XP_015835757.1:p.[Asp1331Glu]","LOC103313173",103313173,null,"103313173 [Gene Symbol: LOC103313173] [Locus Tag: TcasGA2_TC014491] [Chromosome: LG5] [Map Location: ] [Description: LRR receptor-like serine/threonine-protein kinase GSO2] [Gene Type: protein-coding]","LOC103313173; TcasGA2_TC014491"]
[751,"NC_007420.3",11309079,"SNV","G","A","Homozygous",22,22,100,1,17,5,0.23,37.86,22,22,9,17,null,1,1,"no","A/A","No",1,87.71,"XP_015836106.1:c.[112G>A]; XP_015836104.1:c.[112G>A]; XP_015836107.1:c.[112G>A]; XP_015836102.1:c.[112G>A]; XP_015836103.1:c.[112G>A]; XP_015836105.1:c.[112G>A]","XP_015836106.1:p.[Glu38Lys]; XP_015836104.1:p.[Glu38Lys]; XP_015836107.1:p.[Glu38Lys]; XP_015836102.1:p.[Glu38Lys]; XP_015836103.1:p.[Glu38Lys]; XP_015836105.1:p.[Glu38Lys]","LOC107398017",107398017,null,"107398017 [Gene Symbol: LOC107398017] [Locus Tag: TcasGA2_TC014504] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC107398017; TcasGA2_TC014504"]
[752,"NC_007420.3",11505121,"SNV","T","C","Homozygous",20,20,100,1,12,14,0.46,37.65,26,26,12,12,null,1,1,"no","C/C","No",1,80.11,"XP_015835634.1:c.6314T>C","XP_015835634.1:p.Leu2105Ser","LOC655574",655574,null,"655574 [Gene Symbol: LOC655574] [Locus Tag: TcasGA2_TC014546] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized protein PFB0145c] [Gene Type: protein-coding]","TcasGA2_TC014546; LOC655574"]
[753,"NC_007420.3",11556114,"SNV","G","T","Homozygous",20,20,100,1,14,7,0.33,37.55,21,21,10,13,null,1,1,"no","T/T","No",1,81.7,"XP_008193991.1:c.[469C>A]; XP_008193990.1:c.[469C>A]","XP_008193991.1:p.[Leu157Met]; XP_008193990.1:p.[Leu157Met]","LOC100141626",100141626,null,"100141626 [Gene Symbol: LOC100141626] [Locus Tag: TcasGA2_TC013249] [Chromosome: LG5] [Map Location: ] [Description: putative transferase CAF17 homolog, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC013249; LOC100141626"]
[754,"NC_007420.3",11912174,"SNV","G","A","Homozygous",27,27,100,1,8,19,0.3,36,27,27,12,18,null,1,1,"no","A/A","No",1,102.74,"XP_008194015.1:c.1467G>A","XP_008194015.1:p.Met489Ile","LOC103313192",103313192,null,"103313192 [Gene Symbol: LOC103313192] [Locus Tag: TcasGA2_TC014573] [Chromosome: LG5] [Map Location: ] [Description: cGMP-dependent protein kinase, isozyme 1] [Gene Type: protein-coding]","TcasGA2_TC014573; LOC103313192"]
[755,"NC_007420.3",12089142,"SNV","T","C","Homozygous",20,20,100,1,8,17,0.32,35.85,25,25,8,15,null,1,1,"no","C/C","No",1,77.11,"XP_969335.1:c.728T>C","XP_969335.1:p.Val243Ala","LOC657807",657807,null,"657807 [Gene Symbol: LOC657807] [Locus Tag: TcasGA2_TC014579] [Chromosome: LG5] [Map Location: ] [Description: cilia- and flagella-associated protein 20] [Gene Type: protein-coding]","LOC657807; TcasGA2_TC014579"]
[756,"NC_007420.3",12130761,"SNV","C","G","Homozygous",20,20,100,1,14,8,0.36,38.15,22,22,14,14,null,1,1,"no","G/G","No",1,80.09,"XP_008194030.2:c.2251G>C","XP_008194030.2:p.Gly751Arg","LOC100141837",100141837,null,"100141837 [Gene Symbol: LOC100141837] [Locus Tag: TcasGA2_TC013215] [Chromosome: LG5] [Map Location: ] [Description: neprilysin-2] [Gene Type: protein-coding]","TcasGA2_TC013215; LOC100141837"]
[757,"NC_007420.3",12131601,"Deletion","G","-","Homozygous",25,25,100,1,13,13,0.5,38,26,26,12,15,null,1,1,"no","-/-","No",1,102.8,"XP_008194030.2:c.1501delC","XP_008194030.2:p.Leu501fs","LOC100141837",100141837,null,"100141837 [Gene Symbol: LOC100141837] [Locus Tag: TcasGA2_TC013215] [Chromosome: LG5] [Map Location: ] [Description: neprilysin-2] [Gene Type: protein-coding]","TcasGA2_TC013215; LOC100141837"]
[758,"NC_007420.3",12140480,"SNV","G","A","Homozygous",20,20,100,1,9,14,0.39,36.25,23,23,13,14,null,1,1,"no","A/A","No",1,81.69,"XP_008194036.1:c.145G>A","XP_008194036.1:p.Val49Ile","LOC103313197",103313197,null,"103313197 [Gene Symbol: LOC103313197] [Locus Tag: TcasGA2_TC014587] [Chromosome: LG5] [Map Location: ] [Description: secernin-3] [Gene Type: protein-coding]","TcasGA2_TC014587; LOC103313197"]
[759,"NC_007420.3",12207859,"SNV","G","A","Homozygous",21,21,100,1,13,10,0.43,38.71,23,23,12,11,null,1,1,"no","A/A","No",1,84.7,"XP_015836183.1:c.1187G>A","XP_015836183.1:p.Gly396Glu","LOC655129",655129,null,"655129 [Gene Symbol: LOC655129] [Locus Tag: TcasGA2_TC014596] [Chromosome: LG5] [Map Location: ] [Description: leucine-rich repeat-containing protein 34] [Gene Type: protein-coding]","TcasGA2_TC014596; LOC655129"]
[760,"NC_007420.3",12277181,"SNV","A","G","Homozygous",29,29,100,1,24,8,0.25,37.76,32,32,15,18,null,1,1,"no","G/G","No",1,107.18,"XP_008194222.1:c.238A>G","XP_008194222.1:p.Thr80Ala","LOC103313237",103313237,null,"103313237 [Gene Symbol: LOC103313237] [Locus Tag: TcasGA2_TC014602] [Chromosome: LG5] [Map Location: ] [Description: golgin subfamily A member 2] [Gene Type: protein-coding]","LOC103313237; TcasGA2_TC014602"]
[761,"NC_007420.3",12277358,"SNV","C","A","Homozygous",28,28,100,1,12,19,0.39,37.54,31,31,15,16,null,1,1,"no","A/A","No",1,105.76,"XP_008194222.1:c.415C>A","XP_008194222.1:p.Arg139Ser","LOC103313237",103313237,null,"103313237 [Gene Symbol: LOC103313237] [Locus Tag: TcasGA2_TC014602] [Chromosome: LG5] [Map Location: ] [Description: golgin subfamily A member 2] [Gene Type: protein-coding]","LOC103313237; TcasGA2_TC014602"]
[762,"NC_007420.3",12281746,"SNV","G","T","Homozygous",28,28,100,1,18,14,0.44,38.11,32,32,11,16,null,1,1,"no","T/T","No",1,105.76,"XP_001809587.2:c.1144C>A","XP_001809587.2:p.Pro382Thr","LOC100141811",100141811,null,"100141811 [Gene Symbol: LOC100141811] [Locus Tag: TcasGA2_TC013210] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein 2 homolog] [Gene Type: protein-coding]","LOC100141811; TcasGA2_TC013210"]
[763,"NC_007420.3",12506440,"SNV","A","G","Homozygous",21,21,100,1,15,10,0.4,36.38,25,25,10,18,null,1,1,"no","G/G","No",1,83.1,"XP_015836040.1:c.[979A>G]; XP_969407.1:c.[826A>G]; XP_008194248.1:c.[826A>G]; XP_015836041.1:c.[826A>G]; XP_008194247.1:c.[979A>G]; XP_008194246.1:c.[979A>G]; XP_008194249.1:c.[826A>G]","XP_015836040.1:p.[Ser327Gly]; XP_969407.1:p.[Ser276Gly]; XP_008194248.1:p.[Ser276Gly]; XP_015836041.1:p.[Ser276Gly]; XP_008194247.1:p.[Ser327Gly]; XP_008194246.1:p.[Ser327Gly]; XP_008194249.1:p.[Ser276Gly]","LOC657653, LOC657885","657653 , 657885",null,"657653 [Gene Symbol: LOC657653] [Locus Tag: TcasGA2_TC013195] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC657653] [Gene Type: protein-coding] || 657885 [Gene Symbol: LOC657885] [Locus Tag: TcasGA2_TC014620] [Chromosome: LG5] [Map Location: ] [Description: anoctamin-10] [Gene Type: protein-coding]","LOC657653; TcasGA2_TC013195 || LOC657885; Axs; TcasGA2_TC014620"]
[764,"NC_007420.3",12556133,"SNV","G","A","Homozygous",26,26,100,1,20,9,0.31,37.85,29,29,12,16,null,1,1,"no","A/A","No",1,99.74,"XP_969911.1:c.[4628G>A]; XP_008194255.1:c.[4637G>A]","XP_969911.1:p.[Ser1543Asn]; XP_008194255.1:p.[Ser1546Asn]","LOC658430",658430,null,"658430 [Gene Symbol: LOC658430] [Locus Tag: TcasGA2_TC014624] [Chromosome: LG5] [Map Location: ] [Description: death-inducer obliterator 1] [Gene Type: protein-coding]","LOC658430; TcasGA2_TC014624"]
[768,"NC_007420.3",12643075,"SNV","T","C","Homozygous",21,21,100,1,8,13,0.38,37.48,21,21,10,14,null,1,1,"no","C/C","No",1,83.13,"XP_015835746.1:c.[451T>C]; XP_015835745.1:c.[451T>C]","XP_015835746.1:p.[Ser151Pro]; XP_015835745.1:p.[Ser151Pro]","LOC107397971",107397971,null,"107397971 [Gene Symbol: LOC107397971] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC107397971] [Gene Type: protein-coding]","LOC107397971"]
[769,"NC_007420.3",12687286,"SNV","C","T","Homozygous",27,27,100,1,17,12,0.41,36.22,29,29,15,19,null,1,1,"no","T/T","No",1,102.75,"XP_008194279.1:c.1903C>T","XP_008194279.1:p.Pro635Ser","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[771,"NC_007420.3",12688677,"SNV","C","G","Heterozygous",9,22,40.91,1,8,2,0.2,37.78,10,24,5,7,0.6,0.25,0.94,"no","C/G","No",1,66.13,"XP_008194279.1:c.3202C>G","XP_008194279.1:p.Pro1068Ala","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[772,"NC_007420.3",12688738,"SNV","C","T","Heterozygous",14,22,63.64,1,6,11,0.35,36.64,17,26,8,10,-1.13,0.94,1,"no","C/T","No",1,54.63,"XP_008194279.1:c.3263C>T","XP_008194279.1:p.Pro1088Leu","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[773,"NC_007420.3",12703961,"SNV","C","T","Homozygous",20,20,100,1,7,16,0.3,38.65,23,23,11,12,null,1,1,"no","T/T","No",1,81.69,"XP_008194283.1:c.[1015G>A]; XP_001812538.1:c.[1015G>A]; XP_008194282.1:c.[1015G>A]","XP_008194283.1:p.[Ala339Thr]; XP_001812538.1:p.[Ala339Thr]; XP_008194282.1:p.[Ala339Thr]","LOC100142152",100142152,null,"100142152 [Gene Symbol: LOC100142152] [Locus Tag: TcasGA2_TC030773] [Chromosome: LG5] [Map Location: ] [Description: nucleolin 1] [Gene Type: protein-coding]","LOC100142152; TcasGA2_TC030773"]
[774,"NC_007420.3",12711791,"SNV","T","C","Homozygous",22,22,100,1,16,8,0.33,38.18,24,24,12,15,null,1,1,"no","C/C","No",1,86.13,"XP_008194285.1:c.1133T>C","XP_008194285.1:p.Val378Ala","LOC100141738",100141738,null,"100141738 [Gene Symbol: LOC100141738] [Locus Tag: TcasGA2_TC014639] [Chromosome: LG5] [Map Location: ] [Description: transmembrane protein 26] [Gene Type: protein-coding]","LOC100141738; TcasGA2_TC014639"]
[775,"NC_007420.3","12711826..12711834","Deletion","AAGAAACTG","-","Homozygous",25,26,96.15,1,19,8,0.3,37.24,27,28,15,20,null,1,1,"no","-/-","No",1,200,"XP_008194285.1:c.1168_1176delAAGAAACTG","XP_008194285.1:p.Lys394_Lys396del","LOC100141738",100141738,null,"100141738 [Gene Symbol: LOC100141738] [Locus Tag: TcasGA2_TC014639] [Chromosome: LG5] [Map Location: ] [Description: transmembrane protein 26] [Gene Type: protein-coding]","LOC100141738; TcasGA2_TC014639"]
[776,"NC_007420.3",13095112,"SNV","T","C","Homozygous",21,22,95.45,1,5,16,0.24,38.67,21,23,12,14,null,1,1,"no","C/C","No",1,59.29,"XP_008194313.1:c.[121T>C]; XP_015836010.1:c.[73T>C]","XP_008194313.1:p.[Phe41Leu]; XP_015836010.1:p.[Phe25Leu]","LOC660991",660991,null,"660991 [Gene Symbol: LOC660991] [Locus Tag: TcasGA2_TC014658] [Chromosome: LG5] [Map Location: ] [Description: insulin-like growth factor-binding protein complex acid labile subunit] [Gene Type: protein-coding]","LOC660991; TcasGA2_TC014658"]
[777,"NC_007420.3",13187574,"SNV","T","A","Homozygous",20,20,100,1,10,14,0.42,36.8,24,24,11,13,null,1,1,"no","A/A","No",1,81.69,"XP_001814012.1:c.1414A>T","XP_001814012.1:p.Thr472Ser","LOC661929",661929,null,"661929 [Gene Symbol: LOC661929] [Locus Tag: TcasGA2_TC013148] [Chromosome: LG5] [Map Location: ] [Description: PNR-like protein] [Gene Type: protein-coding]","PNR; LOC661929; NR2E6; TcasGA2_TC013148; NR2E3; PNR-like"]
[778,"NC_007420.3",13518822,"SNV","A","T","Homozygous",21,21,100,1,14,11,0.44,37.05,25,25,12,14,null,1,1,"no","T/T","No",1,84.71,"XP_001814936.2:c.629A>T","XP_001814936.2:p.Tyr210Phe","LOC100141883",100141883,null,"100141883 [Gene Symbol: LOC100141883] [Locus Tag: TcasGA2_TC014698] [Chromosome: LG5] [Map Location: ] [Description: multiple epidermal growth factor-like domains protein 8] [Gene Type: protein-coding]","TcasGA2_TC014698; LOC100141883"]
[779,"NC_007420.3",13553798,"SNV","C","G","Homozygous",21,21,100,1,11,11,0.5,37.95,22,22,13,16,null,1,1,"no","G/G","No",1,83.1,"XP_974542.2:c.466C>G","XP_974542.2:p.Leu156Val","LOC663402",663402,null,"663402 [Gene Symbol: LOC663402] [Locus Tag: TcasGA2_TC014700] [Chromosome: LG5] [Map Location: ] [Description: membrane metallo-endopeptidase-like 1] [Gene Type: protein-coding]","TcasGA2_TC014700; LOC663402"]
[780,"NC_007420.3",13641050,"SNV","A","G","Homozygous",21,21,100,1,11,13,0.46,38.67,24,24,11,15,null,1,1,"no","G/G","No",1,83.1,"XP_008194357.1:c.1628T>C","XP_008194357.1:p.Met543Thr","LOC103313274",103313274,null,"103313274 [Gene Symbol: LOC103313274] [Locus Tag: TcasGA2_TC013109] [Chromosome: LG5] [Map Location: ] [Description: putative ATP-dependent RNA helicase DHX33] [Gene Type: protein-coding]","LOC103313274; TcasGA2_TC013109"]
[781,"NC_007420.3",13781424,"SNV","G","A","Homozygous",20,20,100,1,10,13,0.43,36.3,23,23,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_008194370.1:c.113G>A","XP_008194370.1:p.Gly38Asp","LOC663690",663690,null,"663690 [Gene Symbol: LOC663690] [Locus Tag: TcasGA2_TC033237] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC663690; TcasGA2_TC033237"]
[782,"NC_007420.3",13785311,"SNV","C","A","Homozygous",22,22,100,1,17,5,0.23,39.18,22,22,13,16,null,1,1,"no","A/A","No",1,87.7,"XP_974830.1:c.346C>A","XP_974830.1:p.His116Asn","LOC663702",663702,null,"663702 [Gene Symbol: LOC663702] [Locus Tag: TcasGA2_TC014714] [Chromosome: LG5] [Map Location: ] [Description: maf-like protein CLL_A0561] [Gene Type: protein-coding]","TcasGA2_TC014714; LOC663702"]
[783,"NC_007420.3",13810895,"SNV","C","A","Homozygous",20,20,100,1,17,4,0.19,37.55,21,21,12,15,null,1,1,"no","A/A","No",1,81.69,"XP_008194372.1:c.1600C>A","XP_008194372.1:p.His534Asn","LOC103313276",103313276,null,"103313276 [Gene Symbol: LOC103313276] [Locus Tag: TcasGA2_TC014717] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313276; TcasGA2_TC014717"]
[784,"NC_007420.3",13819016,"SNV","G","C","Homozygous",23,23,100,1,19,6,0.24,39.3,25,25,12,18,null,1,1,"no","C/C","No",1,89.14,"XP_008194375.1:c.[2942C>G]; XP_008194385.1:c.[2504C>G]; XP_008194387.1:c.[2420C>G]; XP_015835915.1:c.[2897C>G]; XP_008194382.1:c.[2651C>G]; XP_008194383.1:c.[2856+165C>G]; XP_008194377.1:c.[2942C>G]; XP_008194376.1:c.[2942C>G]; XP_008194380.1:c.[2720C>G]; XP_008194378.1:c.[2750C>G]; XP_008194386.1:c.[2474C>G]; XP_008194379.1:c.[2942C>G]; XP_008194381.1:c.[2696C>G]; XP_015835916.1:c.[2606C>G]; XP_008194384.1:c.[2507C>G]","XP_008194375.1:p.[Thr981Ser]; XP_008194385.1:p.[Thr835Ser]; XP_008194387.1:p.[Thr807Ser]; XP_015835915.1:p.[Thr966Ser]; XP_008194382.1:p.[Thr884Ser]; XP_008194377.1:p.[Thr981Ser]; XP_008194376.1:p.[Thr981Ser]; XP_008194380.1:p.[Thr907Ser]; XP_008194378.1:p.[Thr917Ser]; XP_008194386.1:p.[Thr825Ser]; XP_008194379.1:p.[Thr981Ser]; XP_008194381.1:p.[Thr899Ser]; XP_015835916.1:p.[Thr869Ser]; XP_008194384.1:p.[Thr836Ser]","LOC663789",663789,null,"663789 [Gene Symbol: LOC663789] [Locus Tag: TcasGA2_TC033238] [Chromosome: LG5] [Map Location: ] [Description: tensin] [Gene Type: protein-coding]","TcasGA2_TC033238; LOC663789"]
[785,"NC_007420.3",13907678,"SNV","T","A","Homozygous",25,25,100,1,13,13,0.5,37.4,26,26,12,16,null,1,1,"no","A/A","No",1,96.73,"XP_015835918.1:c.[913A>T]; XP_008194390.1:c.[905-497A>T]; XP_008194388.1:c.[905-497A>T]; XP_008194391.1:c.[905-497A>T]; XP_008194389.1:c.[905-497A>T]; XP_974947.2:c.[905-497A>T]","XP_015835918.1:p.Thr305Ser","LOC663820",663820,null,"663820 [Gene Symbol: LOC663820] [Locus Tag: TcasGA2_TC033240] [Chromosome: LG5] [Map Location: ] [Description: protein abrupt] [Gene Type: protein-coding]","LOC663820; TcasGA2_TC033240"]
[786,"NC_007420.3",14107299,"SNV","C","T","Heterozygous",16,26,61.54,1,8,14,0.36,38.12,22,32,8,7,0.26,0.34,0.92,"no","C/T","No",1,68.93,"XP_015835641.1:c.1654G>A","XP_015835641.1:p.Val552Ile","LOC103313280",103313280,null,"103313280 [Gene Symbol: LOC103313280] [Locus Tag: TcasGA2_TC033244] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313280] [Gene Type: protein-coding]","LOC103313280; TcasGA2_TC033244"]
[787,"NC_007420.3",14108284,"SNV","T","C","Homozygous",20,20,100,1,15,5,0.25,37.35,20,20,14,16,null,1,1,"no","C/C","No",1,80.12,"XP_015835641.1:c.892A>G","XP_015835641.1:p.Ser298Gly","LOC103313280",103313280,null,"103313280 [Gene Symbol: LOC103313280] [Locus Tag: TcasGA2_TC033244] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313280] [Gene Type: protein-coding]","LOC103313280; TcasGA2_TC033244"]
[788,"NC_007420.3",14130396,"SNV","G","T","Homozygous",20,20,100,1,5,15,0.25,38.7,20,20,11,13,null,1,1,"no","T/T","No",1,81.69,"XP_975053.1:c.694G>T","XP_975053.1:p.Val232Leu","LOC663932",663932,null,"663932 [Gene Symbol: LOC663932] [Locus Tag: TcasGA2_TC014727] [Chromosome: LG5] [Map Location: ] [Description: venom dipeptidyl peptidase 4] [Gene Type: protein-coding]","TcasGA2_TC014727; LOC663932"]
[791,"NC_007420.3",14286030,"SNV","C","G","Homozygous",22,22,100,1,15,7,0.32,37.45,22,22,16,13,null,1,1,"no","G/G","No",1,86.1,"XP_015835750.1:c.[2529C>G]; XP_008194424.1:c.[2064+1000C>G]; XP_015835749.1:c.[2574C>G]; XP_008194423.1:c.[2097+1000C>G]; XP_008194420.1:c.[2109+1000C>G]","XP_015835750.1:p.[His843Gln]; XP_015835749.1:p.[His858Gln]","LOC664095",664095,null,"664095 [Gene Symbol: LOC664095] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: tyrosine-protein kinase PR2] [Gene Type: protein-coding]","LOC664095"]
[792,"NC_007420.3",14296560,"SNV","T","A","Homozygous",25,25,100,1,18,7,0.28,37.28,25,25,12,21,null,1,1,"no","A/A","No",1,96.74,"XP_975229.1:c.779A>T","XP_975229.1:p.His260Leu","LOC664121",664121,null,"664121 [Gene Symbol: LOC664121] [Locus Tag: TcasGA2_TC013076] [Chromosome: LG5] [Map Location: ] [Description: origin recognition complex subunit 3] [Gene Type: protein-coding]","LOC664121; TcasGA2_TC013076"]
[794,"NC_007420.3",14831815,"SNV","C","A","Homozygous",22,22,100,1,10,15,0.4,38.09,25,25,9,12,null,1,1,"no","A/A","No",1,87.7,"XP_015836119.1:c.[1704C>A]; XP_008194079.1:c.[1704C>A]; XP_015836117.1:c.[1701C>A]; XP_008194080.1:c.[1698C>A]","XP_015836119.1:p.[Asp568Glu]; XP_008194079.1:p.[Asp568Glu]; XP_015836117.1:p.[Asp567Glu]; XP_008194080.1:p.[Asp566Glu]","LOC657573",657573,null,"657573 [Gene Symbol: LOC657573] [Locus Tag: TcasGA2_TC014768] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC657573] [Gene Type: protein-coding]","LOC657573; TcasGA2_TC014768"]
[795,"NC_007420.3",14837072,"SNV","A","G","Heterozygous",12,22,54.55,1,2,10,0.17,38.17,12,22,8,8,-0.92,0.83,0.49,"no","A/G","No",1,78.87,"XP_008194079.1:c.[6281A>G]; XP_015836119.1:c.[6281A>G]; XP_015836117.1:c.[6278A>G]; XP_008194080.1:c.[6275A>G]","XP_008194079.1:p.[Lys2094Arg]; XP_015836119.1:p.[Lys2094Arg]; XP_015836117.1:p.[Lys2093Arg]; XP_008194080.1:p.[Lys2092Arg]","LOC657573",657573,null,"657573 [Gene Symbol: LOC657573] [Locus Tag: TcasGA2_TC014768] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC657573] [Gene Type: protein-coding]","LOC657573; TcasGA2_TC014768"]
[796,"NC_007420.3",15143139,"SNV","G","C","Homozygous",27,27,100,1,11,22,0.33,36.93,33,33,10,13,null,1,1,"no","C/C","No",1,101.17,"XP_008194133.1:c.[2737G>C]; XP_008194131.1:c.[2752G>C]; XP_015835668.1:c.[2737G>C]; XP_008194135.1:c.[2722G>C]; XP_008194132.1:c.[2752G>C]","XP_008194133.1:p.[Glu913Gln]; XP_008194131.1:p.[Glu918Gln]; XP_015835668.1:p.[Glu913Gln]; XP_008194135.1:p.[Glu908Gln]; XP_008194132.1:p.[Glu918Gln]","LOC100142267",100142267,null,"100142267 [Gene Symbol: LOC100142267] [Locus Tag: TcasGA2_TC014794] [Chromosome: LG5] [Map Location: ] [Description: probable phosphorylase b kinase regulatory subunit beta] [Gene Type: protein-coding]","LOC100142267; TcasGA2_TC014794"]
[798,"NC_007421.3",572135,"SNV","A","T","Homozygous",21,21,100,1,13,9,0.41,38.29,22,22,10,14,null,1,1,"no","T/T","No",1,84.7,"XP_001814047.1:c.927T>A","XP_001814047.1:p.Asp309Glu","LOC660395",660395,null,"660395 [Gene Symbol: LOC660395] [Locus Tag: TcasGA2_TC015316] [Chromosome: LG6] [Map Location: ] [Description: bleomycin hydrolase] [Gene Type: protein-coding]","TcasGA2_TC015316; LOC660395"]
[800,"NC_007421.3",661058,"SNV","A","G","Homozygous",23,23,100,1,13,14,0.48,37.26,27,27,12,16,null,1,1,"no","G/G","No",1,89.12,"XP_008194510.1:c.[200T>C]; XP_008194509.1:c.[200T>C]","XP_008194510.1:p.[Leu67Pro]; XP_008194509.1:p.[Leu67Pro]","LOC661263",661263,null,"661263 [Gene Symbol: LOC661263] [Locus Tag: TcasGA2_TC015308] [Chromosome: LG6] [Map Location: ] [Description: codanin-1] [Gene Type: protein-coding]","LOC661263; TcasGA2_TC015308"]
[801,"NC_007421.3",733655,"SNV","C","T","Heterozygous",9,23,39.13,1,5,4,0.44,38.33,9,24,8,8,0.16,1,1,"no","C/T","No",1,63.24,"XP_001814494.2:c.386C>T","XP_001814494.2:p.Ala129Val","LOC100141658",100141658,null,"100141658 [Gene Symbol: LOC100141658] [Locus Tag: TcasGA2_TC015423] [Chromosome: LG6] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC100141658; TcasGA2_TC015423"]
[802,"NC_007421.3",763167,"SNV","C","T","Homozygous",22,22,100,1,14,12,0.46,38.86,26,26,13,19,null,1,1,"no","T/T","No",1,87.71,"XP_008194515.1:c.107C>T","XP_008194515.1:p.Pro36Leu","Gr80",100142419,null,"100142419 [Gene Symbol: Gr80] [Locus Tag: TcasGA2_TC030166] [Chromosome: LG6] [Map Location: ] [Description: gustatory receptor] [Gene Type: protein-coding]","TcGr70; Gr80; TcasGA2_TC030166"]
[804,"NC_007421.3",937728,"SNV","A","G","Homozygous",20,20,100,1,9,14,0.39,37.85,23,23,13,13,null,1,1,"no","G/G","No",1,80.09,"XP_015836194.1:c.4372T>C","XP_015836194.1:p.Ser1458Pro","LOC662547",662547,null,"662547 [Gene Symbol: LOC662547] [Locus Tag: TcasGA2_TC015284] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC662547] [Gene Type: protein-coding]","LOC662547; TcasGA2_TC015284"]
[805,"NC_007421.3","989913..989914","MNV","TG","CT","Homozygous",21,24,87.5,1,12,16,0.43,35.57,28,32,12,17,null,1,1,"no","CT/CT","No",1,200,"XP_015836260.1:c.3780_3781delCAinsAG","XP_015836260.1:p.Thr1261Ala","LOC103313333",103313333,null,"103313333 [Gene Symbol: LOC103313333] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: unconventional myosin-XVIIIa] [Gene Type: protein-coding]","LOC103313333"]
[807,"NC_007421.3","1562885..1562886","MNV","TA","CG","Homozygous",30,30,100,1,27,4,0.13,37.03,31,31,14,26,null,1,1,"no","CG/CG","No",1,200,"XP_015836386.1:c.276_277delTAinsCG","XP_015836386.1:p.Ile93Val","LOC662580",662580,null,"662580 [Gene Symbol: LOC662580] [Locus Tag: TcasGA2_TC015501] [Chromosome: LG6] [Map Location: ] [Description: sugar transporter 3] [Gene Type: protein-coding]","LOC662580; TcasGA2_TC015501; st3"]
[808,"NC_007421.3",2057303,"SNV","C","G","Homozygous",23,23,100,1,7,16,0.3,36.26,23,23,11,14,null,1,1,"no","G/G","No",1,89.12,"XP_967750.1:c.[1171G>C]; XP_008201637.1:c.[607G>C]","XP_967750.1:p.[Val391Leu]; XP_008201637.1:p.[Val203Leu]","LOC656106",656106,null,"656106 [Gene Symbol: LOC656106] [Locus Tag: TcasGA2_TC015173] [Chromosome: LG6] [Map Location: ] [Description: ubiquitin carboxyl-terminal hydrolase 2] [Gene Type: protein-coding]","LOC656106; TcasGA2_TC015173"]
[809,"NC_007421.3",2074706,"SNV","A","T","Homozygous",20,20,100,1,8,15,0.35,36.45,23,23,13,15,null,1,1,"no","T/T","No",1,81.7,"XP_008201663.1:c.[1303T>A]; XP_968140.1:c.[825+1005A>T]","XP_008201663.1:p.Leu435Ile","LOC656521, LOC103315247","656521 , 103315247",null,"656521 [Gene Symbol: LOC656521] [Locus Tag: TcasGA2_TC015540] [Chromosome: LG6] [Map Location: ] [Description: phosphoglycerate kinase] [Gene Type: protein-coding] || 103315247 [Gene Symbol: LOC103315247] [Locus Tag: TcasGA2_TC015169] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC656521; TcasGA2_TC015540 || TcasGA2_TC015169; LOC103315247"]
[810,"NC_007421.3","2180179..2180181","Deletion","GGC","-","Heterozygous",9,21,42.86,1,4,5,0.44,35.44,9,21,5,7,-1.96,0.1,1,"no","complex","No",1,200,"XP_008190371.1:c.[268_270delGGC]; XP_969409.1:c.[256_258delGGC]","XP_008190371.1:p.[Gly96del]; XP_969409.1:p.[Gly92del]","LOC657888",657888,null,"657888 [Gene Symbol: LOC657888] [Locus Tag: TcasGA2_TC015549] [Chromosome: LG6] [Map Location: ] [Description: glycine-rich cell wall structural protein] [Gene Type: protein-coding]","TcasGA2_TC015549; LOC657888"]
[811,"NC_007421.3",2239006,"SNV","C","T","Homozygous",21,21,100,1,15,10,0.4,36.81,25,25,9,16,null,1,1,"no","T/T","No",1,84.71,"XP_976295.1:c.85G>A","XP_976295.1:p.Gly29Ser","LOC658802",658802,null,"658802 [Gene Symbol: LOC658802] [Locus Tag: TcasGA2_TC015156] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC658802] [Gene Type: protein-coding]","LOC658802; TcasGA2_TC015156"]
[812,"NC_007421.3",2309032,"SNV","C","T","Homozygous",20,20,100,1,13,8,0.38,37.7,21,21,10,15,null,1,1,"no","T/T","No",1,81.7,"XP_970667.1:c.374C>T","XP_970667.1:p.Ser125Phe","LOC659249",659249,null,"659249 [Gene Symbol: LOC659249] [Locus Tag: TcasGA2_TC015559] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC659249] [Gene Type: protein-coding]","LOC659249; TcasGA2_TC015559"]
[813,"NC_007421.3",2426062,"SNV","T","C","Homozygous",24,24,100,1,15,17,0.47,36.67,32,32,16,16,null,1,1,"no","C/C","No",1,92.15,"XP_008190580.2:c.440T>C","XP_008190580.2:p.Val147Ala","LOC660300",660300,null,"660300 [Gene Symbol: LOC660300] [Locus Tag: TcasGA2_TC015566] [Chromosome: LG6] [Map Location: ] [Description: venom acid phosphatase Acph-1] [Gene Type: protein-coding]","TcasGA2_TC015566; LOC660300"]
[814,"NC_007421.3","2430778..2430780","MNV","GAT","TGC","Homozygous",22,22,100,1,6,20,0.23,35.73,26,26,13,17,null,1,1,"no","TGC/TGC","No",1,200,"XP_008190573.1:c.351_353delATCinsGCA","XP_008190573.1:p.Ser118Gln","LOC103312220",103312220,null,"103312220 [Gene Symbol: LOC103312220] [Locus Tag: TcasGA2_TC015142] [Chromosome: LG6] [Map Location: ] [Description: nicastrin] [Gene Type: protein-coding]","LOC103312220; TcasGA2_TC015142"]
[815,"NC_007421.3",2451777,"SNV","A","G","Homozygous",30,30,100,1,22,10,0.31,38.93,32,32,9,19,null,1,1,"no","G/G","No",1,110.19,"XP_008190620.1:c.[3503T>C]; XP_008190626.1:c.[3461T>C]","XP_008190620.1:p.[Val1168Ala]; XP_008190626.1:p.[Val1154Ala]","LOC661054, LOC660604","661054 , 660604",null,"661054 [Gene Symbol: LOC661054] [Locus Tag: TcasGA2_TC015569] [Chromosome: LG6] [Map Location: ] [Description: inter-alpha-trypsin inhibitor heavy chain H4] [Gene Type: protein-coding] || 660604 [Gene Symbol: LOC660604] [Locus Tag: TcasGA2_TC015138] [Chromosome: LG6] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 9] [Gene Type: protein-coding]","LOC661054; TcasGA2_TC015569 || LOC660604; TcasGA2_TC015138; ADAMTS9"]
[817,"NC_007421.3",2516458,"SNV","A","C","Homozygous",20,20,100,1,16,6,0.27,36.7,22,22,12,15,null,1,1,"no","C/C","No",1,80.12,"XP_015836282.1:c.1371A>C","XP_015836282.1:p.Glu457Asp","LOC661265",661265,null,"661265 [Gene Symbol: LOC661265] [Locus Tag: TcasGA2_TC015117] [Chromosome: LG6] [Map Location: ] [Description: activating signal cointegrator 1 complex subunit 3] [Gene Type: protein-coding]","LOC661265; TcasGA2_TC015117"]
[818,"NC_007421.3",2694948,"SNV","C","A","Homozygous",21,21,100,1,8,17,0.32,37.71,25,25,10,13,null,1,1,"no","A/A","No",1,84.7,"XP_973367.1:c.9G>T","XP_973367.1:p.Glu3Asp","LOC662157",662157,null,"662157 [Gene Symbol: LOC662157] [Locus Tag: TcasGA2_TC015585] [Chromosome: LG6] [Map Location: ] [Description: bifunctional transcriptional activator/DNA repair enzyme Ada] [Gene Type: protein-coding]","TcasGA2_TC015585; LOC662157"]
[819,"NC_007421.3",2694952,"SNV","C","G","Homozygous",22,22,100,1,8,18,0.31,36.77,26,26,10,14,null,1,1,"no","G/G","No",1,86.11,"XP_973367.1:c.5G>C","XP_973367.1:p.Gly2Ala","LOC662157",662157,null,"662157 [Gene Symbol: LOC662157] [Locus Tag: TcasGA2_TC015585] [Chromosome: LG6] [Map Location: ] [Description: bifunctional transcriptional activator/DNA repair enzyme Ada] [Gene Type: protein-coding]","TcasGA2_TC015585; LOC662157"]
[821,"NC_007421.3",2783894,"SNV","C","A","Homozygous",26,26,100,1,12,16,0.43,38.15,28,28,13,19,null,1,1,"no","A/A","No",1,99.74,"XP_008194698.1:c.3123C>A","XP_008194698.1:p.Asp1041Glu","LOC662012, LOC661726","662012 , 661726",null,"662012 [Gene Symbol: LOC662012] [Locus Tag: TcasGA2_TC015581] [Chromosome: LG6] [Map Location: ] [Description: protein neuralized] [Gene Type: protein-coding] || 661726 [Gene Symbol: LOC661726] [Locus Tag: TcasGA2_TC033390] [Chromosome: LG6] [Map Location: ] [Description: multidrug resistance-associated protein 4-like] [Gene Type: protein-coding]","TcasGA2_TC015581; LOC662012 || TcasGA2_TC033390; LOC661726"]
[822,"NC_007421.3","3413107..3413109","Deletion","CAA","-","Homozygous",20,20,100,1,11,13,0.46,36.4,24,24,11,17,null,1,1,"no","-/-","No",1,200,"XP_015836326.1:c.[2542_2544delCAA]; XP_015836325.1:c.[2545_2547delCAA]; XP_015836327.1:c.[2515_2517delCAA]; XP_008194733.1:c.[2491_2493delCAA]; XP_008194735.1:c.[2275_2277delCAA]","XP_015836326.1:p.[Gln855del]; XP_015836325.1:p.[Gln856del]; XP_015836327.1:p.[Gln846del]; XP_008194733.1:p.[Gln838del]; XP_008194735.1:p.[Gln766del]","LOC658049",658049,null,"658049 [Gene Symbol: LOC658049] [Locus Tag: TcasGA2_TC015608] [Chromosome: LG6] [Map Location: ] [Description: eukaryotic translation initiation factor 4E transporter] [Gene Type: protein-coding]","Eif4enif1; LOC658049; TcasGA2_TC015608"]
[823,"NC_007421.3",3419450,"SNV","A","C","Homozygous",20,20,100,1,16,7,0.3,38.2,23,23,11,13,null,1,1,"no","C/C","No",1,80.11,"XP_008194736.1:c.[840A>C]; XP_008194737.1:c.[840A>C]; XP_008194738.1:c.[840A>C]","XP_008194736.1:p.[Lys280Asn]; XP_008194737.1:p.[Lys280Asn]; XP_008194738.1:p.[Lys280Asn]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[824,"NC_007421.3",3419500,"SNV","A","C","Homozygous",26,26,100,1,13,16,0.45,37.04,29,29,14,16,null,1,1,"no","C/C","No",1,98.17,"XP_008194737.1:c.[890A>C]; XP_008194736.1:c.[890A>C]; XP_008194738.1:c.[890A>C]","XP_008194737.1:p.[Glu297Ala]; XP_008194736.1:p.[Glu297Ala]; XP_008194738.1:p.[Glu297Ala]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[825,"NC_007421.3",3445858,"SNV","T","G","Homozygous",23,23,100,1,18,14,0.44,38.87,32,32,13,17,null,1,1,"no","G/G","No",1,89.12,"XP_969783.1:c.882A>C","XP_969783.1:p.Lys294Asn","LOC658288",658288,null,"658288 [Gene Symbol: LOC658288] [Locus Tag: TcasGA2_TC015093] [Chromosome: LG6] [Map Location: ] [Description: rad50] [Gene Type: protein-coding]","LOC658288; TcasGA2_TC015093; rad50"]
[826,"NC_007421.3",3445883,"SNV","A","G","Homozygous",20,20,100,1,11,13,0.46,39.15,24,24,12,16,null,1,1,"no","G/G","No",1,80.09,"XP_969783.1:c.857T>C","XP_969783.1:p.Val286Ala","LOC658288",658288,null,"658288 [Gene Symbol: LOC658288] [Locus Tag: TcasGA2_TC015093] [Chromosome: LG6] [Map Location: ] [Description: rad50] [Gene Type: protein-coding]","LOC658288; TcasGA2_TC015093; rad50"]
[827,"NC_007421.3",3526416,"SNV","A","T","Homozygous",20,20,100,1,11,10,0.48,39.1,21,21,13,14,null,1,1,"no","T/T","No",1,81.69,"NP_001161903.1:c.605A>T","NP_001161903.1:p.Tyr202Phe","Pmp1-b",659324,"peritrophic matrix protein 1-B","659324 [Gene Symbol: Pmp1-b] [Locus Tag: TcasGA2_TC015620] [Chromosome: LG6] [Map Location: ] [Description: peritrophic matrix protein 1-B] [Gene Type: protein-coding]","TcasGA2_TC015620; Pmp1-b"]
[828,"NC_007421.3",3587342,"SNV","T","C","Homozygous",20,20,100,1,18,4,0.18,35.75,22,22,10,12,null,1,1,"no","C/C","No",1,80.12,"XP_970918.1:c.2381A>G","XP_970918.1:p.Glu794Gly","LOC659526",659526,null,"659526 [Gene Symbol: LOC659526] [Locus Tag: TcasGA2_TC015082] [Chromosome: LG6] [Map Location: ] [Description: DNA-directed RNA polymerase I subunit RPA1] [Gene Type: protein-coding]","LOC659526; TcasGA2_TC015082"]
[829,"NC_007421.3",3587793,"SNV","A","G","Homozygous",23,23,100,1,4,20,0.17,38.26,24,24,10,13,null,1,1,"no","G/G","No",1,89.12,"XP_970918.1:c.1987T>C","XP_970918.1:p.Cys663Arg","LOC659526",659526,null,"659526 [Gene Symbol: LOC659526] [Locus Tag: TcasGA2_TC015082] [Chromosome: LG6] [Map Location: ] [Description: DNA-directed RNA polymerase I subunit RPA1] [Gene Type: protein-coding]","LOC659526; TcasGA2_TC015082"]
[830,"NC_007421.3",3587802,"SNV","T","G","Homozygous",24,24,100,1,4,20,0.17,38.12,24,24,10,13,null,1,1,"no","G/G","No",1,92.13,"XP_970918.1:c.1978A>C","XP_970918.1:p.Ile660Leu","LOC659526",659526,null,"659526 [Gene Symbol: LOC659526] [Locus Tag: TcasGA2_TC015082] [Chromosome: LG6] [Map Location: ] [Description: DNA-directed RNA polymerase I subunit RPA1] [Gene Type: protein-coding]","LOC659526; TcasGA2_TC015082"]
[831,"NC_007421.3",3814103,"SNV","C","A","Homozygous",33,33,100,1,24,13,0.35,36.3,37,37,13,21,null,1,1,"no","A/A","No",1,120.81,"XP_015836420.1:c.[8204C>A]; XP_015836423.1:c.[7982C>A]; XP_015836419.1:c.[8255C>A]; XP_015836422.1:c.[8126C>A]; XP_015836421.1:c.[8195C>A]; XP_015836424.1:c.[7973C>A]","XP_015836420.1:p.[Thr2735Asn]; XP_015836423.1:p.[Thr2661Asn]; XP_015836419.1:p.[Thr2752Asn]; XP_015836422.1:p.[Thr2709Asn]; XP_015836421.1:p.[Thr2732Asn]; XP_015836424.1:p.[Thr2658Asn]","LOC660883",660883,null,"660883 [Gene Symbol: LOC660883] [Locus Tag: TcasGA2_TC015636] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized protein KIAA1109] [Gene Type: protein-coding]","LOC660883; TcasGA2_TC015636"]
[833,"NC_007421.3",4230792,"SNV","A","G","Homozygous",20,20,100,1,13,7,0.35,37.3,20,20,12,14,null,1,1,"no","G/G","No",1,80.09,"XP_973569.2:c.1583T>C","XP_973569.2:p.Ile528Thr","LOC662377",662377,null,"662377 [Gene Symbol: LOC662377] [Locus Tag: TcasGA2_TC015049] [Chromosome: LG6] [Map Location: ] [Description: probable ATP-dependent RNA helicase DHX34] [Gene Type: protein-coding]","LOC662377; TcasGA2_TC015049"]
[839,"NC_007421.3",4992182,"SNV","A","C","Heterozygous",11,30,36.67,1,0,11,0,39.55,11,35,6,6,1.89,0.6,0.43,"no","A/C","No",1,70.22,"XP_015836482.1:c.[33A>C]; XP_015836465.1:c.[2655A>C]","XP_015836482.1:p.[Lys11Asn]; XP_015836465.1:p.[Lys885Asn]","LOC657193, LOC656607, LOC107398091","657193 , 656607 , 107398091",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding] || 107398091 [Gene Symbol: LOC107398091] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398091] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607 || LOC107398091"]
[840,"NC_007421.3","4992634..4992635","MNV","AC","GT","Heterozygous",11,25,44,1,6,5,0.45,39.27,11,28,6,10,0.42,0.99,1,"no","complex","No",1,200,"XP_015836465.1:c.[3107_3108delACinsGT]; XP_015836482.1:c.[485_486delACinsGT]","XP_015836465.1:p.[His1036Arg]; XP_015836482.1:p.[His162Arg]","LOC657193, LOC656607, LOC107398091","657193 , 656607 , 107398091",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding] || 107398091 [Gene Symbol: LOC107398091] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398091] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607 || LOC107398091"]
[841,"NC_007421.3",4993101,"SNV","G","T","Heterozygous",12,40,30,1,9,8,0.47,38.75,17,54,8,8,-0.63,0.46,0.98,"no","G/T","No",1,50.87,"XP_015836465.1:c.[3426+53G>T]; XP_015836482.1:c.[857G>T]","XP_015836482.1:p.Cys286Phe","LOC657193, LOC656607, LOC107398091","657193 , 656607 , 107398091",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding] || 107398091 [Gene Symbol: LOC107398091] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398091] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607 || LOC107398091"]
[842,"NC_007421.3",4993334,"SNV","G","A","Heterozygous",11,26,42.31,1,2,9,0.18,37.64,11,27,7,9,-1.66,0.83,0.78,"no","A/G","No",1,80.5,"XP_008194877.1:c.[1580C>T]; XP_015836465.1:c.[3426+286G>A]","XP_008194877.1:p.Thr527Ile","LOC657193, LOC656607, LOC656860","657193 , 656607 , 656860",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding] || 656860 [Gene Symbol: LOC656860] [Locus Tag: TcasGA2_TC015681] [Chromosome: LG6] [Map Location: ] [Description: centrosomal protein of 120 kDa] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607 || LOC656860; TcasGA2_TC015681"]
[843,"NC_007421.3",4993361,"SNV","T","A","Heterozygous",11,25,44,1,2,10,0.17,39.09,12,27,7,10,0.55,0.44,0.48,"no","A/T","No",1,83.26,"XP_015836465.1:c.[3426+313T>A]; XP_008194877.1:c.[1553A>T]","XP_008194877.1:p.Lys518Ile","LOC657193, LOC656607, LOC656860","657193 , 656607 , 656860",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 656607 [Gene Symbol: LOC656607] [Locus Tag: TcasGA2_TC015006] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: centromere-associated protein E] [Gene Type: protein-coding] || 656860 [Gene Symbol: LOC656860] [Locus Tag: TcasGA2_TC015681] [Chromosome: LG6] [Map Location: ] [Description: centrosomal protein of 120 kDa] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || TcasGA2_TC015006; LOC656607 || LOC656860; TcasGA2_TC015681"]
[844,"NC_007421.3","5071989..5071990","MNV","AC","TG","Homozygous",20,20,100,1,12,10,0.45,37.18,22,22,12,13,null,1,1,"no","TG/TG","No",1,200,"XP_008194870.1:c.1076_1077delGTinsCA","XP_008194870.1:p.Ser359Thr","LOC103313423",103313423,null,"103313423 [Gene Symbol: LOC103313423] [Locus Tag: TcasGA2_TC015679] [Chromosome: LG6] [Map Location: ] [Description: spindle assembly abnormal protein 6 homolog] [Gene Type: protein-coding]","LOC103313423; TcasGA2_TC015679"]
[845,"NC_007421.3",5190110,"SNV","G","A","Homozygous",22,22,100,1,4,21,0.16,39.82,25,25,11,11,null,1,1,"no","A/A","No",1,87.7,"XP_008194864.1:c.914G>A","XP_008194864.1:p.Ser305Asn","LOC655209",655209,null,"655209 [Gene Symbol: LOC655209] [Locus Tag: TcasGA2_TC015021] [Chromosome: LG6] [Map Location: ] [Description: golgin subfamily A member 4] [Gene Type: protein-coding]","LOC655209; TcasGA2_TC015021"]
[846,"NC_007421.3",5203683,"SNV","G","T","Homozygous",19,20,95,1,3,16,0.16,38.63,19,20,10,12,null,1,1,"no","T/T","No",1,50.52,"XP_015836466.1:c.785C>A","XP_015836466.1:p.Pro262Gln","LOC654999",654999,null,"654999 [Gene Symbol: LOC654999] [Locus Tag: TcasGA2_TC015670] [Chromosome: LG6] [Map Location: ] [Description: serine protease 44] [Gene Type: protein-coding]","LOC654999; H164; TcasGA2_TC015670"]
[847,"NC_007421.3",5250129,"SNV","C","G","Heterozygous",12,21,57.14,1,7,6,0.46,38.42,13,22,8,9,0.14,0.37,0.76,"no","C/G","No",1,68.82,"XP_015836473.1:c.[1619C>G]; XP_015836472.1:c.[1910C>G]; XP_015836471.1:c.[2150C>G]","XP_015836473.1:p.[Thr540Ser]; XP_015836472.1:p.[Thr637Ser]; XP_015836471.1:p.[Thr717Ser]","LOC654936",654936,null,"654936 [Gene Symbol: LOC654936] [Locus Tag: TcasGA2_TC015023] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 136] [Gene Type: protein-coding]","TcasGA2_TC015023; LOC654936"]
[852,"NC_007421.3","5721659..5721660","MNV","AA","GG","Heterozygous",22,28,78.57,1,11,11,0.5,38.8,22,28,7,17,null,0.73,1,"no","complex","No",1,200,"XP_972225.1:c.[815_816delAAinsGG]; XP_008191971.1:c.[50-15359_50-15358delTTinsCC]","XP_972225.1:p.Glu272Gly","LOC660777, LOC660938","660777 , 660938",null,"660777 [Gene Symbol: LOC660777] [Locus Tag: TcasGA2_TC014971] [Chromosome: LG6] [Map Location: ] [Description: flotillin-2] [Gene Type: protein-coding] || 660938 [Gene Symbol: LOC660938] [Locus Tag: TcasGA2_TC015714] [Chromosome: LG6] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC660777; TcasGA2_TC014971 || LOC660938; TcasGA2_TC015714"]
[854,"NC_007421.3",5828249,"SNV","G","A","Homozygous",22,22,100,1,10,13,0.43,35.36,23,23,13,15,null,1,1,"no","A/A","No",1,84.69,"XP_008191978.1:c.1409C>T","XP_008191978.1:p.Ala470Val","LOC662195",662195,null,"662195 [Gene Symbol: LOC662195] [Locus Tag: TcasGA2_TC014963] [Chromosome: LG6] [Map Location: ] [Description: ribosomal RNA processing protein 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC014963; LOC662195"]
[856,"NC_007421.3",5828827,"SNV","C","T","Heterozygous",10,20,50,1,4,7,0.36,37.1,11,21,7,7,0.26,0.6,0.69,"no","C/T","No",1,82.05,"XP_008191978.1:c.877G>A","XP_008191978.1:p.Val293Ile","LOC662195",662195,null,"662195 [Gene Symbol: LOC662195] [Locus Tag: TcasGA2_TC014963] [Chromosome: LG6] [Map Location: ] [Description: ribosomal RNA processing protein 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC014963; LOC662195"]
[857,"NC_007421.3",5830709,"SNV","T","C","Heterozygous",8,20,40,1,5,4,0.44,36.88,9,22,7,7,0.85,0.48,1,"no","C/T","No",1,60.19,"XP_008191994.1:c.[1184A>G]; XP_015836610.1:c.[1139A>G]","XP_008191994.1:p.[Asn395Ser]; XP_015836610.1:p.[Asn380Ser]","LOC662227",662227,null,"662227 [Gene Symbol: LOC662227] [Locus Tag: TcasGA2_TC014962] [Chromosome: LG6] [Map Location: ] [Description: N-acetylglucosamine-6-sulfatase] [Gene Type: protein-coding]","LOC662227; TcasGA2_TC014962"]
[858,"NC_007421.3",5833090,"SNV","C","T","Heterozygous",12,23,52.17,1,8,6,0.43,37.58,14,28,7,9,0.77,0.96,1,"no","C/T","No",1,89.66,"XP_008191980.1:c.229G>A","XP_008191980.1:p.Asp77Asn","LOC103312640",103312640,null,"103312640 [Gene Symbol: LOC103312640] [Locus Tag: TcasGA2_TC014961] [Chromosome: LG6] [Map Location: ] [Description: iron-sulfur cluster co-chaperone protein HscB, mitochondrial] [Gene Type: protein-coding]","LOC103312640; TcasGA2_TC014961"]
[859,"NC_007421.3",7358339,"SNV","A","C","Homozygous",21,21,100,1,4,17,0.19,38.76,21,21,13,14,null,1,1,"no","C/C","No",1,83.13,"XP_015836516.1:c.[1032T>G]; XP_015836514.1:c.[115-1134A>C]","XP_015836516.1:p.Phe344Leu","LOC655778, LOC107398097","655778 , 107398097",null,"655778 [Gene Symbol: LOC655778] [Locus Tag: TcasGA2_TC015747] [Chromosome: LG6] [Map Location: ] [Description: TBC1 domain family member 1] [Gene Type: protein-coding] || 107398097 [Gene Symbol: LOC107398097] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: cilia- and flagella-associated protein 61] [Gene Type: protein-coding]","TcasGA2_TC015747; LOC655778 || LOC107398097"]
[862,"NC_007421.3",7488273,"SNV","T","A","Homozygous",26,26,100,1,12,14,0.46,37.85,26,26,13,18,null,1,1,"no","A/A","No",1,99.74,"XP_015836505.1:c.3063A>T","XP_015836505.1:p.Lys1021Asn","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[863,"NC_007421.3",7489159,"SNV","C","T","Homozygous",28,28,100,1,22,14,0.39,36.82,36,36,12,18,null,1,1,"no","T/T","No",1,105.76,"XP_015836505.1:c.2177G>A","XP_015836505.1:p.Arg726Gln","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[866,"NC_007421.3","7503223..7503224","MNV","TT","GC","Homozygous",18,20,90,1,5,17,0.23,37.94,22,24,10,12,null,0.99,0.97,"no","GC/GC","No",1,200,"XP_008194931.1:c.2753_2754delTTinsGC","XP_008194931.1:p.Phe918Cys","LOC656861",656861,null,"656861 [Gene Symbol: LOC656861] [Locus Tag: TcasGA2_TC015758] [Chromosome: LG6] [Map Location: ] [Description: syndetin] [Gene Type: protein-coding]","TcasGA2_TC015758; LOC656861"]
[867,"NC_007421.3",7579294,"SNV","G","C","Heterozygous",11,26,42.31,1,3,8,0.27,39.09,11,27,8,9,0.57,0.3,0.77,"no","C/G","No",1,80.49,"XP_008194915.1:c.4090C>G","XP_008194915.1:p.Pro1364Ala","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[868,"NC_007421.3",7579343,"SNV","G","T","Heterozygous",8,20,40,1,3,7,0.3,37.75,10,22,5,6,0.35,0.38,0.99,"no","G/T","No",1,55.59,"XP_008194915.1:c.4041C>A","XP_008194915.1:p.His1347Gln","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[869,"NC_007421.3",7579497,"SNV","G","A","Heterozygous",18,27,66.67,1,8,12,0.4,37.61,20,31,9,16,0.46,0.78,1,"no","A/G","No",1,53.24,"XP_008194915.1:c.3887C>T","XP_008194915.1:p.Thr1296Ile","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[871,"NC_007421.3",7583821,"SNV","A","G","Homozygous",22,22,100,1,18,7,0.28,38.55,25,25,11,15,null,1,1,"no","G/G","No",1,86.11,"XP_015836513.1:c.[278A>G]; XP_008194916.1:c.[275A>G]","XP_015836513.1:p.[Lys93Arg]; XP_008194916.1:p.[Lys92Arg]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[872,"NC_007421.3","7587310^7587311","Insertion","-","AGG","Heterozygous",17,22,77.27,1,6,13,0.32,37.68,19,26,7,12,-0.61,0.91,1,"no","complex","No",1,200,"XP_008194916.1:c.[3718_3719insAGG]; XP_015836513.1:c.[3721_3722insAGG]","XP_008194916.1:p.[Glu1241_Pro1242insGlu]; XP_015836513.1:p.[Glu1242_Pro1243insGlu]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[873,"NC_007421.3",7591296,"SNV","G","C","Homozygous",29,29,100,1,13,18,0.42,38.69,31,31,17,21,null,1,1,"no","C/C","No",1,107.2,"XP_008194916.1:c.[4698G>C]; XP_015836513.1:c.[4701G>C]","XP_008194916.1:p.[Glu1566Asp]; XP_015836513.1:p.[Glu1567Asp]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[874,"NC_007421.3",7753229,"SNV","A","G","Heterozygous",9,27,33.33,1,5,5,0.5,36.11,10,29,7,6,-1.47,1,1,"no","A/G","No",1,53.29,"XP_015836540.1:c.[14A>G]; XP_969268.1:c.[14A>G]; XP_015836539.1:c.[107A>G]","XP_015836540.1:p.[Lys5Arg]; XP_969268.1:p.[Lys5Arg]; XP_015836539.1:p.[Lys36Arg]","LOC657733",657733,null,"657733 [Gene Symbol: LOC657733] [Locus Tag: TcasGA2_TC015765] [Chromosome: LG6] [Map Location: ] [Description: dynein light chain D] [Gene Type: protein-coding]","DLC-D; TcasGA2_TC015765; LOC657733"]
[878,"NC_007421.3",7985991,"SNV","A","T","Heterozygous",11,20,55,1,3,8,0.27,38.09,11,20,8,9,-0.68,0.38,0.33,"no","A/T","No",1,71.66,"XP_970603.1:c.280A>T","XP_970603.1:p.Thr94Ser","LOC659183",659183,null,"659183 [Gene Symbol: LOC659183] [Locus Tag: TcasGA2_TC015780] [Chromosome: LG6] [Map Location: ] [Description: serine protease P166] [Gene Type: protein-coding]","P166; TcasGA2_TC015780; LOC659183"]
[879,"NC_007421.3",7994258,"SNV","C","T","Heterozygous",9,20,45,1,7,2,0.22,37,9,20,5,8,-1.41,0.42,0.78,"no","C/T","No",1,71.67,"XP_970736.2:c.673C>T","XP_970736.2:p.Pro225Ser","LOC659326",659326,null,"659326 [Gene Symbol: LOC659326] [Locus Tag: TcasGA2_TC015781] [Chromosome: LG6] [Map Location: ] [Description: elongator complex protein 1] [Gene Type: protein-coding]","LOC659326; TcasGA2_TC015781"]
[880,"NC_007421.3",7996129,"SNV","G","A","Homozygous",24,24,100,1,14,15,0.48,37.42,29,29,10,12,null,1,1,"no","A/A","No",1,93.72,"XP_970736.2:c.2497G>A","XP_970736.2:p.Asp833Asn","LOC659326",659326,null,"659326 [Gene Symbol: LOC659326] [Locus Tag: TcasGA2_TC015781] [Chromosome: LG6] [Map Location: ] [Description: elongator complex protein 1] [Gene Type: protein-coding]","LOC659326; TcasGA2_TC015781"]
[882,"NC_007421.3",8033609,"SNV","T","A","Heterozygous",14,22,63.64,1,10,6,0.38,38,16,24,7,9,-1.33,0.85,0.97,"no","A/T","No",1,53.46,"XP_015836570.1:c.[8A>T]; XP_976329.2:c.[8A>T]","XP_015836570.1:p.[Tyr3Phe]; XP_976329.2:p.[Tyr3Phe]","LOC659792",659792,null,"659792 [Gene Symbol: LOC659792] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC659792] [Gene Type: protein-coding]","LOC659792"]
[883,"NC_007421.3",8828073,"SNV","C","T","Heterozygous",13,22,59.09,1,8,5,0.38,37.46,13,22,7,7,-0.6,0.59,0.99,"no","C/T","No",1,67.43,"XP_967344.1:c.721G>A","XP_967344.1:p.Ala241Thr","LOC655690",655690,null,"655690 [Gene Symbol: LOC655690] [Locus Tag: TcasGA2_TC014905] [Chromosome: LG6] [Map Location: ] [Description: peroxisome assembly protein 12] [Gene Type: protein-coding]","LOC655690; TcasGA2_TC014905"]
[884,"NC_007421.3",8828075,"SNV","C","T","Heterozygous",18,27,66.67,1,12,6,0.33,36.56,18,28,9,10,-0.49,0.46,1,"no","C/T","No",1,53.51,"XP_967344.1:c.719G>A","XP_967344.1:p.Ser240Asn","LOC655690",655690,null,"655690 [Gene Symbol: LOC655690] [Locus Tag: TcasGA2_TC014905] [Chromosome: LG6] [Map Location: ] [Description: peroxisome assembly protein 12] [Gene Type: protein-coding]","LOC655690; TcasGA2_TC014905"]
[886,"NC_007421.3",9008733,"SNV","C","T","Homozygous",21,21,100,1,16,5,0.24,38.48,21,21,11,12,null,1,1,"no","T/T","No",1,84.7,"XP_969339.3:c.737C>T","XP_969339.3:p.Ala246Val","LOC657811",657811,null,"657811 [Gene Symbol: LOC657811] [Locus Tag: TcasGA2_TC015826] [Chromosome: LG6] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD1B] [Gene Type: protein-coding]","TcasGA2_TC015826; LOC657811"]
[887,"NC_007421.3",9099479,"SNV","G","A","Homozygous",20,20,100,1,9,18,0.33,37.3,27,27,10,9,null,1,1,"no","A/A","No",1,81.69,"XP_008195028.1:c.1075G>A","XP_008195028.1:p.Val359Ile","LOC658510",658510,null,"658510 [Gene Symbol: LOC658510] [Locus Tag: TcasGA2_TC015831] [Chromosome: LG6] [Map Location: ] [Description: pre-mRNA-processing factor 40 homolog A] [Gene Type: protein-coding]","LOC658510; TcasGA2_TC015831"]
[888,"NC_007421.3",9165855,"SNV","C","T","Homozygous",29,29,100,1,16,13,0.45,40.03,29,29,15,20,null,1,1,"no","T/T","No",1,108.76,"XP_008194975.1:c.2071C>T","XP_008194975.1:p.Pro691Ser","LOC100142233",100142233,null,"100142233 [Gene Symbol: LOC100142233] [Locus Tag: TcasGA2_TC015835] [Chromosome: LG6] [Map Location: ] [Description: dynein assembly factor 1, axonemal] [Gene Type: protein-coding]","LOC100142233; TcasGA2_TC015835"]
[889,"NC_007421.3",9214318,"SNV","A","T","Homozygous",24,24,100,1,11,18,0.38,36.67,29,29,16,18,null,1,1,"no","T/T","No",1,93.73,"XP_015836579.1:c.[2939T>A]; XP_015836577.1:c.[2939T>A]; XP_015836580.1:c.[2939T>A]; XP_015836578.1:c.[2939T>A]; XP_008194976.2:c.[2939T>A]","XP_015836579.1:p.[Ile980Asn]; XP_015836577.1:p.[Ile980Asn]; XP_015836580.1:p.[Ile980Asn]; XP_015836578.1:p.[Ile980Asn]; XP_008194976.2:p.[Ile980Asn]","LOC659101",659101,null,"659101 [Gene Symbol: LOC659101] [Locus Tag: TcasGA2_TC014880] [Chromosome: LG6] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC659101; TcasGA2_TC014880"]
[890,"NC_007421.3",9356444,"SNV","T","C","Homozygous",22,22,100,1,5,17,0.23,38.23,22,22,15,16,null,1,1,"no","C/C","No",1,86.13,"NP_001034522.1:c.1327T>C","NP_001034522.1:p.Ser443Pro","Tyr2",641599,"pro-phenol oxidase subunit 2","641599 [Gene Symbol: Tyr2] [Locus Tag: TcasGA2_TC015848] [Chromosome: LG6] [Map Location: ] [Description: pro-phenol oxidase subunit 2] [Gene Type: protein-coding]","TcasGA2_TC015848; PPO; TcTyr2; Tyr2; TcproTyr2; PPO2"]
[892,"NC_007421.3",9597271,"SNV","T","C","Homozygous",22,22,100,1,19,5,0.21,38.95,24,24,13,15,null,1,1,"no","C/C","No",1,86.14,"XP_015836588.1:c.[3148A>G]; XP_015836589.1:c.[3049A>G]; XP_008195050.1:c.[3049A>G]; XP_972127.1:c.[3145A>G]; XP_015836590.1:c.[3148A>G]; XP_015836587.1:c.[3148A>G]","XP_015836588.1:p.[Ile1050Val]; XP_015836589.1:p.[Ile1017Val]; XP_008195050.1:p.[Ile1017Val]; XP_972127.1:p.[Ile1049Val]; XP_015836590.1:p.[Ile1050Val]; XP_015836587.1:p.[Ile1050Val]","LOC660831",660831,null,"660831 [Gene Symbol: LOC660831] [Locus Tag: TcasGA2_TC014862] [Chromosome: LG6] [Map Location: ] [Description: probable cation-transporting ATPase 13A3] [Gene Type: protein-coding]","LOC660831; TcasGA2_TC014862"]
[893,"NC_007421.3",9877959,"SNV","T","C","Heterozygous",15,48,31.25,1,11,4,0.27,39.53,15,53,9,12,-0.26,0.62,1,"no","C/T","No",1,71.58,"XP_015836604.1:c.[8-213A>G]; XP_015836603.1:c.[1676A>G]","XP_015836603.1:p.Asp559Gly","LOC107398116",107398116,null,"107398116 [Gene Symbol: LOC107398116] [Locus Tag: TcasGA2_TC033477] [Chromosome: LG6] [Map Location: ] [Description: 52 kDa repressor of the inhibitor of the protein kinase-like] [Gene Type: protein-coding]","LOC107398116; TcasGA2_TC033477"]
[894,"NC_007422.5",912545,"SNV","T","C","Homozygous",28,28,100,1,24,7,0.23,37.96,31,31,10,20,null,1,1,"no","C/C","No",1,104.18,"XP_008195157.1:c.964A>G","XP_008195157.1:p.Thr322Ala","LOC661271",661271,null,"661271 [Gene Symbol: LOC661271] [Locus Tag: TcasGA2_TC009455] [Chromosome: LG7] [Map Location: ] [Description: toll-like receptor 3] [Gene Type: protein-coding]","LOC661271; TcasGA2_TC009455"]
[895,"NC_007422.5",1040850,"SNV","A","G","Homozygous",21,21,100,1,17,4,0.19,38.38,21,21,8,13,null,1,1,"no","G/G","No",1,83.09,"XP_008195140.1:c.[355A>G]; XP_015836736.1:c.[355A>G]; XP_015836735.1:c.[355A>G]; XP_015836734.1:c.[355A>G]; XP_015836733.1:c.[355A>G]; XP_015836737.1:c.[355A>G]","XP_008195140.1:p.[Lys119Glu]; XP_015836736.1:p.[Lys119Glu]; XP_015836735.1:p.[Lys119Glu]; XP_015836734.1:p.[Lys119Glu]; XP_015836733.1:p.[Lys119Glu]; XP_015836737.1:p.[Lys119Glu]","LOC660611",660611,null,"660611 [Gene Symbol: LOC660611] [Locus Tag: TcasGA2_TC009361] [Chromosome: LG7] [Map Location: ] [Description: complement receptor type 2] [Gene Type: protein-coding]","TcasGA2_TC009361; LOC660611"]
[896,"NC_007422.5",1134696,"SNV","C","T","Homozygous",22,22,100,1,15,12,0.44,37.91,27,27,14,13,null,1,1,"no","T/T","No",1,87.71,"XP_008195128.1:c.623G>A","XP_008195128.1:p.Arg208Lys","LOC659993",659993,null,"659993 [Gene Symbol: LOC659993] [Locus Tag: TcasGA2_TC033519] [Chromosome: LG7] [Map Location: ] [Description: intron-binding protein aquarius] [Gene Type: protein-coding]","LOC659993; AQR; TcasGA2_TC033519"]
[897,"NC_007422.5",1134756,"SNV","A","G","Homozygous",22,22,100,1,16,8,0.33,37.95,24,24,11,13,null,1,1,"no","G/G","No",1,86.11,"XP_008195128.1:c.563T>C","XP_008195128.1:p.Leu188Pro","LOC659993",659993,null,"659993 [Gene Symbol: LOC659993] [Locus Tag: TcasGA2_TC033519] [Chromosome: LG7] [Map Location: ] [Description: intron-binding protein aquarius] [Gene Type: protein-coding]","LOC659993; AQR; TcasGA2_TC033519"]
[899,"NC_007422.5",1343161,"SNV","C","T","Homozygous",22,22,100,1,12,10,0.45,35.91,22,22,10,16,null,1,1,"no","T/T","No",1,87.71,"XP_969341.2:c.1954G>A","XP_969341.2:p.Ala652Thr","LOC657813",657813,null,"657813 [Gene Symbol: LOC657813] [Locus Tag: TcasGA2_TC009430] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC657813] [Gene Type: protein-coding]","TcasGA2_TC009430; LOC657813"]
[900,"NC_007422.5",1378387,"SNV","G","A","Heterozygous",10,22,45.45,1,10,1,0.09,38.9,11,24,5,6,0.63,0.73,0.79,"no","A/G","No",1,78.89,"XP_001810799.2:c.475G>A","XP_001810799.2:p.Asp159Asn","LOC100142531",100142531,null,"100142531 [Gene Symbol: LOC100142531] [Locus Tag: TcasGA2_TC009384] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC100142531] [Gene Type: protein-coding]","TcasGA2_TC009384; LOC100142531"]
[901,"NC_007422.5",1397559,"SNV","C","G","Heterozygous",11,24,45.83,1,5,7,0.42,36.36,12,26,10,9,-1.13,0.68,0.69,"no","C/G","No",1,86.05,"XP_968761.1:c.131C>G","XP_968761.1:p.Ser44Trp","LOC657197",657197,null,"657197 [Gene Symbol: LOC657197] [Locus Tag: TcasGA2_TC009387] [Chromosome: LG7] [Map Location: ] [Description: probable RNA-binding protein CG14230] [Gene Type: protein-coding]","LOC657197; TcasGA2_TC009387"]
[902,"NC_007422.5",1454000,"SNV","T","C","Homozygous",20,20,100,1,11,9,0.45,36.05,20,20,8,11,null,1,1,"no","C/C","No",1,80.11,"XP_008195091.1:c.611T>C","XP_008195091.1:p.Val204Ala","LOC103313489",103313489,null,"103313489 [Gene Symbol: LOC103313489] [Locus Tag: TcasGA2_TC009390] [Chromosome: LG7] [Map Location: ] [Description: probable ATP-dependent RNA helicase DDX27] [Gene Type: protein-coding]","LOC103313489; TcasGA2_TC009390"]
[903,"NC_007422.5",1503201,"SNV","G","C","Heterozygous",13,21,61.9,1,13,5,0.28,38.15,18,26,7,10,0.43,0.72,0.91,"no","C/G","No",1,56.09,"XP_967265.2:c.951C>G","XP_967265.2:p.Asp317Glu","LOC655612",655612,null,"655612 [Gene Symbol: LOC655612] [Locus Tag: TcasGA2_TC009417] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655612] [Gene Type: protein-coding]","LOC655612; TcasGA2_TC009417"]
[904,"NC_007422.5",1516310,"SNV","C","G","Homozygous",24,24,100,1,12,13,0.48,38.29,25,25,14,16,null,1,1,"no","G/G","No",1,92.12,"XP_008195078.1:c.[267C>G]; XP_966821.1:c.[267C>G]","XP_008195078.1:p.[Asn89Lys]; XP_966821.1:p.[Asn89Lys]","LOC655212",655212,null,"655212 [Gene Symbol: LOC655212] [Locus Tag: TcasGA2_TC009394] [Chromosome: LG7] [Map Location: ] [Description: peptidyl-prolyl cis-trans isomerase FKBP8] [Gene Type: protein-coding]","LOC655212; TcasGA2_TC009394"]
[905,"NC_007422.5",1592486,"SNV","T","G","Homozygous",23,23,100,1,8,15,0.35,38.26,23,23,15,16,null,1,1,"no","G/G","No",1,89.12,"XP_015836652.1:c.1369A>C","XP_015836652.1:p.Lys457Gln","LOC103313532",103313532,null,"103313532 [Gene Symbol: LOC103313532] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313532] [Gene Type: protein-coding]","LOC103313532"]
[906,"NC_007422.5",1592514,"SNV","G","T","Homozygous",23,23,100,1,10,14,0.42,38.35,24,24,13,15,null,1,1,"no","T/T","No",1,90.71,"XP_015836652.1:c.1341C>A","XP_015836652.1:p.Phe447Leu","LOC103313532",103313532,null,"103313532 [Gene Symbol: LOC103313532] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313532] [Gene Type: protein-coding]","LOC103313532"]
[907,"NC_007422.5",1804981,"SNV","G","T","Homozygous",20,20,100,1,12,12,0.5,36.95,24,24,14,15,null,1,1,"no","T/T","No",1,81.7,"XP_008195271.1:c.[711G>T]; XP_008195270.1:c.[816G>T]","XP_008195271.1:p.[Lys237Asn]; XP_008195270.1:p.[Lys272Asn]","LOC103313546",103313546,null,"103313546 [Gene Symbol: LOC103313546] [Locus Tag: TcasGA2_TC009516] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313546] [Gene Type: protein-coding]","LOC103313546; TcasGA2_TC009516"]
[908,"NC_007422.5",1814716,"SNV","T","A","Homozygous",22,22,100,1,14,13,0.48,36.73,27,27,15,17,null,1,1,"no","A/A","No",1,87.71,"XP_968071.1:c.2135A>T","XP_968071.1:p.Tyr712Phe","LOC656445",656445,null,"656445 [Gene Symbol: LOC656445] [Locus Tag: TcasGA2_TC009293] [Chromosome: LG7] [Map Location: ] [Description: nucleolar protein 6] [Gene Type: protein-coding]","LOC656445; TcasGA2_TC009293"]
[909,"NC_007422.5",1938453,"SNV","C","T","Homozygous",20,20,100,1,8,15,0.35,37.95,23,23,12,14,null,1,1,"no","T/T","No",1,81.69,"XP_015836654.1:c.3857G>A","XP_015836654.1:p.Ser1286Asn","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[910,"NC_007422.5",1941366,"SNV","C","G","Homozygous",20,20,100,1,11,9,0.45,36.05,20,20,13,14,null,1,1,"no","G/G","No",1,80.08,"XP_015836654.1:c.944G>C","XP_015836654.1:p.Gly315Ala","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[911,"NC_007422.5","1963852^1963853","Insertion","-","CAG","Homozygous",22,22,100,1,12,12,0.5,38.15,24,24,16,16,null,1,1,"no","CAG/CAG","No",1,200,"XP_008195294.1:c.1059_1060insCAG","XP_008195294.1:p.Gln353_Glu354insGln","LOC100141679",100141679,null,"100141679 [Gene Symbol: LOC100141679] [Locus Tag: TcasGA2_TC009528] [Chromosome: LG7] [Map Location: ] [Description: bromodomain-containing protein DDB_G0280777] [Gene Type: protein-coding]","TcasGA2_TC009528; LOC100141679"]
[912,"NC_007422.5",2239419,"SNV","C","T","Homozygous",20,20,100,1,11,15,0.42,37.1,26,26,13,15,null,1,1,"no","T/T","No",1,81.7,"XP_971699.2:c.788C>T","XP_971699.2:p.Thr263Ile","LOC660369",660369,null,"660369 [Gene Symbol: LOC660369] [Locus Tag: TcasGA2_TC009543] [Chromosome: LG7] [Map Location: ] [Description: single-strand selective monofunctional uracil DNA glycosylase] [Gene Type: protein-coding]","LOC660369; TcasGA2_TC009543"]
[913,"NC_007422.5",2244784,"SNV","A","C","Homozygous",21,21,100,1,13,13,0.5,37.29,26,26,10,13,null,1,1,"no","C/C","No",1,83.12,"XP_008195312.1:c.16T>G","XP_008195312.1:p.Ser6Ala","LOC660492",660492,null,"660492 [Gene Symbol: LOC660492] [Locus Tag: TcasGA2_TC009262] [Chromosome: LG7] [Map Location: ] [Description: protein HEXIM] [Gene Type: protein-coding]","LOC660492; TcasGA2_TC009262"]
[914,"NC_007422.5",2306958,"SNV","A","G","Homozygous",20,20,100,1,14,6,0.3,35.45,20,20,12,15,null,1,1,"no","G/G","No",1,74.06,"XP_008195317.2:c.10604A>G","XP_008195317.2:p.Asn3535Ser","LOC660888",660888,null,"660888 [Gene Symbol: LOC660888] [Locus Tag: TcasGA2_TC009548] [Chromosome: LG7] [Map Location: ] [Description: prolow-density lipoprotein receptor-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC009548; LOC660888"]
[915,"NC_007422.5",2311659,"SNV","T","C","Heterozygous",11,20,55,1,1,11,0.08,38.27,12,21,5,6,0.46,0.66,0.8,"no","C/T","No",1,71.7,"XP_008195317.2:c.13507T>C","XP_008195317.2:p.Cys4503Arg","LOC660888",660888,null,"660888 [Gene Symbol: LOC660888] [Locus Tag: TcasGA2_TC009548] [Chromosome: LG7] [Map Location: ] [Description: prolow-density lipoprotein receptor-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC009548; LOC660888"]
[918,"NC_007422.5",2496829,"SNV","G","A","Homozygous",20,20,100,1,10,10,0.5,37.45,20,20,11,16,null,1,1,"no","A/A","No",1,81.69,"XP_973305.1:c.586G>A","XP_973305.1:p.Val196Ile","LOC662091",662091,null,"662091 [Gene Symbol: LOC662091] [Locus Tag: TcasGA2_TC009559] [Chromosome: LG7] [Map Location: ] [Description: centromere/kinetochore protein zw10 homolog] [Gene Type: protein-coding]","LOC662091; TcasGA2_TC009559; mit(1)15; zw10"]
[919,"NC_007422.5",2566642,"SNV","C","G","Homozygous",21,21,100,1,15,6,0.29,38.81,21,21,7,13,null,1,1,"no","G/G","No",1,83.1,"XP_015836994.1:c.[1721C>G]; XP_008195334.1:c.[1721C>G]","XP_015836994.1:p.[Ala574Gly]; XP_008195334.1:p.[Ala574Gly]","LOC100142374",100142374,null,"100142374 [Gene Symbol: LOC100142374] [Locus Tag: TcasGA2_TC009561] [Chromosome: LG7] [Map Location: ] [Description: component of oligomeric golgi complex 1] [Gene Type: protein-coding]","pebbled; TcasGA2_TC009561; Cog1; LOC100142374; peb"]
[920,"NC_007422.5","2813871..2813872","MNV","CA","GT","Heterozygous",15,23,65.22,1,6,9,0.4,35.82,15,24,11,9,-3.65,0.71,0.95,"no","complex","No",1,200,"XP_008195344.1:c.[4613_4614delCAinsGT]; XP_008195345.1:c.[4162+586_4162+587delCAinsGT]","XP_008195344.1:p.Ala1538Gly","LOC107398175, LOC662647","107398175 , 662647",null,"107398175 [Gene Symbol: LOC107398175] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398175] [Gene Type: ncRNA] || 662647 [Gene Symbol: LOC662647] [Locus Tag: TcasGA2_TC009576] [Chromosome: LG7] [Map Location: ] [Description: zinc finger FYVE domain-containing protein 26 homolog] [Gene Type: protein-coding]","LOC107398175 || LOC662647; TcasGA2_TC009576"]
[924,"NC_007422.5",3062995,"SNV","G","A","Heterozygous",6,24,25,1,2,4,0.33,39.67,6,24,2,2,1.93,0.24,0.5,"no","complex","No",1,121.76,"XP_968072.1:c.788C>T","XP_968072.1:p.Ser263Phe","LOC656446",656446,null,"656446 [Gene Symbol: LOC656446] [Locus Tag: TcasGA2_TC030592] [Chromosome: LG7] [Map Location: ] [Description: sister chromatid cohesion protein DCC1] [Gene Type: protein-coding]","TcasGA2_TC030592; LOC656446"]
[925,"NC_007422.5",3071303,"SNV","T","C","Homozygous",20,20,100,1,13,10,0.43,36.25,23,23,12,13,null,1,1,"no","C/C","No",1,80.11,"XP_968458.1:c.1732A>G","XP_968458.1:p.Ile578Val","LOC656865",656865,null,"656865 [Gene Symbol: LOC656865] [Locus Tag: TcasGA2_TC009212] [Chromosome: LG7] [Map Location: ] [Description: EGF-like domain-containing protein 2] [Gene Type: protein-coding]","LOC656865; TcasGA2_TC009212"]
[926,"NC_007422.5",3094795,"SNV","C","T","Heterozygous",8,20,40,1,4,4,0.5,37.88,8,20,4,6,-0.5,0.18,1,"no","C/T","No",1,58.93,"XP_008195387.1:c.[11G>A]; XP_008195388.1:c.[11G>A]","XP_008195387.1:p.[Arg4His]; XP_008195388.1:p.[Arg4His]","LOC657278",657278,null,"657278 [Gene Symbol: LOC657278] [Locus Tag: TcasGA2_TC009208] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC657278; TcasGA2_TC009208"]
[927,"NC_007422.5","3173504^3173505","Insertion","-","ATACCC","Homozygous",20,20,100,1,9,11,0.45,38.35,20,20,8,11,null,1,1,"no","ATACCC/ATACCC","No",1,200,"NP_001137601.1:c.1030_1031insATACCC","NP_001137601.1:p.Lys344delinsAsnThrGln","Gr102",100142554,"gustatory receptor","100142554 [Gene Symbol: Gr102] [Locus Tag: TcasGA2_TC030224] [Chromosome: LG7] [Map Location: ] [Description: gustatory receptor] [Gene Type: protein-coding]","TcasGA2_TC030224; Gr102; TcGr135"]
[931,"NC_007422.5",3197278,"SNV","G","A","Homozygous",22,22,100,1,1,21,0.05,39.45,22,22,12,9,null,1,1,"no","A/A","No",1,87.71,"XP_015836864.1:c.[3176G>A]; XP_015836865.1:c.[1976G>A]","XP_015836864.1:p.[Gly1059Asp]; XP_015836865.1:p.[Gly659Asp]","LOC103313579",103313579,null,"103313579 [Gene Symbol: LOC103313579] [Locus Tag: TcasGA2_TC009605] [Chromosome: LG7] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase kappa] [Gene Type: protein-coding]","TcasGA2_TC009605; LOC103313579"]
[932,"NC_007422.5","3214267^3214268","Insertion","-","AAGTCG","Homozygous",23,23,100,1,6,17,0.26,37.16,23,23,12,14,null,1,1,"no","AAGTCG/AAGTCG","No",1,200,"XP_970329.1:c.[298_299insAAGTCG]; XP_008195405.1:c.[298_299insAAGTCG]; XP_008195406.1:c.[298_299insAAGTCG]","XP_970329.1:p.[Lys100_Glu101insValGlu]; XP_008195405.1:p.[Lys100_Glu101insValGlu]; XP_008195406.1:p.[Lys100_Glu101insValGlu]","LOC658885",658885,null,"658885 [Gene Symbol: LOC658885] [Locus Tag: TcasGA2_TC009607] [Chromosome: LG7] [Map Location: ] [Description: pre-mRNA-processing factor 39] [Gene Type: protein-coding]","LOC658885; TcasGA2_TC009607"]
[933,"NC_007422.5",3220585,"SNV","C","G","Homozygous",20,20,100,1,7,15,0.32,37.7,22,22,12,14,null,1,1,"no","G/G","No",1,80.09,"XP_008195404.1:c.2298G>C","XP_008195404.1:p.Met766Ile","LOC658953",658953,null,"658953 [Gene Symbol: LOC658953] [Locus Tag: TcasGA2_TC009201] [Chromosome: LG7] [Map Location: ] [Description: eIF-2-alpha kinase GCN2] [Gene Type: protein-coding]","LOC658953; TcasGA2_TC009201"]
[936,"NC_007422.5",3261005,"SNV","C","T","Homozygous",23,23,100,1,13,10,0.43,36.87,23,23,14,17,null,1,1,"no","T/T","No",1,90.72,"XP_015836878.1:c.280G>A","XP_015836878.1:p.Val94Ile","LOC659932",659932,null,"659932 [Gene Symbol: LOC659932] [Locus Tag: TcasGA2_TC009192] [Chromosome: LG7] [Map Location: ] [Description: molybdopterin synthase catalytic subunit] [Gene Type: protein-coding]","LOC659932; TcasGA2_TC009192"]
[937,"NC_007422.5",3261388,"SNV","T","G","Heterozygous",12,21,57.14,1,8,9,0.47,38,17,28,6,7,1.14,0.78,0.94,"no","G/T","No",1,65.58,"XP_001812142.1:c.215A>C","XP_001812142.1:p.Gln72Pro","LOC100142286",100142286,null,"100142286 [Gene Symbol: LOC100142286] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: molybdopterin synthase sulfur carrier subunit] [Gene Type: protein-coding]","LOC100142286"]
[938,"NC_007422.5",3261406,"SNV","A","C","Heterozygous",10,22,45.45,1,9,9,0.5,36.3,18,32,5,5,-0.69,0.42,0.99,"no","A/C","No",1,79.71,"XP_001812142.1:c.197T>G","XP_001812142.1:p.Val66Gly","LOC100142286",100142286,null,"100142286 [Gene Symbol: LOC100142286] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: molybdopterin synthase sulfur carrier subunit] [Gene Type: protein-coding]","LOC100142286"]
[939,"NC_007422.5",3270862,"SNV","A","G","Homozygous",27,27,100,1,16,14,0.47,38.19,30,30,14,17,null,1,1,"no","G/G","No",1,101.16,"XP_015836825.1:c.[2618T>C]; XP_008195415.1:c.[2678T>C]","XP_015836825.1:p.[Met873Thr]; XP_008195415.1:p.[Met893Thr]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[940,"NC_007422.5",3270876,"SNV","T","A","Homozygous",28,28,100,1,16,17,0.48,38.18,33,33,14,16,null,1,1,"no","A/A","No",1,105.76,"XP_008195415.1:c.[2664A>T]; XP_015836825.1:c.[2604A>T]","XP_008195415.1:p.[Leu888Phe]; XP_015836825.1:p.[Leu868Phe]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[941,"NC_007422.5",3270914,"SNV","C","G","Heterozygous",15,32,46.88,1,7,8,0.47,37.87,15,36,7,10,0.66,0.32,0.9,"no","C/G","No",1,114.88,"XP_008195415.1:c.[2626G>C]; XP_015836825.1:c.[2566G>C]","XP_008195415.1:p.[Gly876Arg]; XP_015836825.1:p.[Gly856Arg]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[942,"NC_007422.5",3270949,"SNV","T","C","Heterozygous",14,22,63.64,1,7,7,0.5,38.43,14,23,8,10,0.85,0.46,1,"no","C/T","No",1,53.39,"XP_015836825.1:c.[2531A>G]; XP_008195415.1:c.[2591A>G]","XP_015836825.1:p.[Asn844Ser]; XP_008195415.1:p.[Asn864Ser]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[945,"NC_007422.5","3292711^3292712","Insertion","-","TG","Homozygous",31,31,100,1,20,18,0.47,38.34,38,38,22,26,null,1,1,"no","TG/TG","No",1,200,"XP_972081.3:c.[18+21_18+22insTG]; XP_015836834.1:c.[39_40insTG]","XP_015836834.1:p.Tyr14fs","LOC660783",660783,null,"660783 [Gene Symbol: LOC660783] [Locus Tag: TcasGA2_TC009619] [Chromosome: LG7] [Map Location: ] [Description: probable glucosamine 6-phosphate N-acetyltransferase] [Gene Type: protein-coding]","LOC660783; TcasGA2_TC009619"]
[946,"NC_007422.5",3292923,"SNV","G","A","Heterozygous",10,23,43.48,1,2,10,0.17,39.4,12,28,5,7,1.86,0.3,0.52,"no","A/G","No",1,76.19,"XP_015836834.1:c.[202G>A]; XP_972081.3:c.[130G>A]","XP_015836834.1:p.[Gly68Ser]; XP_972081.3:p.[Gly44Ser]","LOC660783",660783,null,"660783 [Gene Symbol: LOC660783] [Locus Tag: TcasGA2_TC009619] [Chromosome: LG7] [Map Location: ] [Description: probable glucosamine 6-phosphate N-acetyltransferase] [Gene Type: protein-coding]","LOC660783; TcasGA2_TC009619"]
[947,"NC_007422.5",3308425,"SNV","T","G","Heterozygous",10,21,47.62,1,4,6,0.4,39.1,10,21,4,7,1.65,0.07,0.81,"no","G/T","No",1,81.82,"XP_008195421.1:c.[724A>C]; XP_015837015.1:c.[724A>C]; XP_015837016.1:c.[724A>C]; XP_972230.2:c.[685A>C]; XP_015837018.1:c.[724A>C]","XP_008195421.1:p.[Thr242Pro]; XP_015837015.1:p.[Thr242Pro]; XP_015837016.1:p.[Thr242Pro]; XP_972230.2:p.[Thr229Pro]; XP_015837018.1:p.[Thr242Pro]","LOC660943",660943,null,"660943 [Gene Symbol: LOC660943] [Locus Tag: TcasGA2_TC009184] [Chromosome: LG7] [Map Location: ] [Description: orexin receptor type 2] [Gene Type: protein-coding]","LOC660943; TcasGA2_TC009184"]
[949,"NC_007422.5","3407310..3407313","MNV","GGTA","TACC","Heterozygous",13,21,61.9,1,9,10,0.47,37.02,19,30,6,10,-0.38,0.91,1,"no","complex","No",1,200,"XP_008195468.1:c.787_790delGGTAinsTACC","XP_008195468.1:p.Gly263_Asn264delinsTyrHis","LOC661938",661938,null,"661938 [Gene Symbol: LOC661938] [Locus Tag: TcasGA2_TC009630] [Chromosome: LG7] [Map Location: ] [Description: acidic mammalian chitinase] [Gene Type: protein-coding]","LOC661938; TcasGA2_TC009630"]
[950,"NC_007422.5",3456806,"SNV","A","T","Homozygous",20,20,100,1,13,11,0.46,38.25,24,24,9,13,null,1,1,"no","T/T","No",1,81.69,"XP_008195430.1:c.2839A>T","XP_008195430.1:p.Ile947Phe","LOC662056",662056,null,"662056 [Gene Symbol: LOC662056] [Locus Tag: TcasGA2_TC009632] [Chromosome: LG7] [Map Location: ] [Description: inhibitor of Bruton tyrosine kinase] [Gene Type: protein-coding]","TcasGA2_TC009632; LOC662056"]
[951,"NC_007422.5",3465319,"SNV","A","G","Homozygous",20,20,100,1,6,15,0.29,38.85,21,21,10,12,null,1,1,"no","G/G","No",1,80.09,"XP_008195431.1:c.1646A>G","XP_008195431.1:p.Lys549Arg","LOC662092",662092,null,"662092 [Gene Symbol: LOC662092] [Locus Tag: TcasGA2_TC009633] [Chromosome: LG7] [Map Location: ] [Description: ankyrin repeat and LEM domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC009633; LOC662092"]
[952,"NC_007422.5",3519187,"SNV","G","A","Homozygous",20,20,100,1,9,11,0.45,37.3,20,20,7,13,null,1,1,"no","A/A","No",1,81.69,"XP_008195435.1:c.[1597G>A]; XP_008195436.1:c.[1654G>A]","XP_008195435.1:p.[Ala533Thr]; XP_008195436.1:p.[Ala552Thr]","LOC662416",662416,null,"662416 [Gene Symbol: LOC662416] [Locus Tag: TcasGA2_TC009640] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 608] [Gene Type: protein-coding]","TcasGA2_TC009640; LOC662416"]
[953,"NC_007422.5",3565884,"SNV","A","G","Homozygous",30,30,100,1,18,13,0.42,38.93,31,31,13,19,null,1,1,"no","G/G","No",1,110.18,"XP_001813632.1:c.[601T>C]; XP_008195438.1:c.[547T>C]","XP_001813632.1:p.[Ser201Pro]; XP_008195438.1:p.[Ser183Pro]","LOC100142357",100142357,null,"100142357 [Gene Symbol: LOC100142357] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: spermine oxidase-like] [Gene Type: protein-coding]","LOC100142357"]
[954,"NC_007422.5",3567320,"SNV","C","T","Heterozygous",20,39,51.28,1,8,16,0.33,37.65,24,43,10,12,1.73,0.29,1,"no","C/T","No",1,146.99,"XP_015836785.1:c.649G>A","XP_015836785.1:p.Glu217Lys","LOC107398165",107398165,null,"107398165 [Gene Symbol: LOC107398165] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: spermine oxidase-like] [Gene Type: protein-coding]","LOC107398165"]
[955,"NC_007422.5",3567585,"SNV","T","G","Heterozygous",9,20,45,1,3,8,0.27,39.56,11,22,6,6,-0.76,0.32,0.62,"no","G/T","No",1,72.35,"XP_015836785.1:c.384A>C","XP_015836785.1:p.Glu128Asp","LOC107398165",107398165,null,"107398165 [Gene Symbol: LOC107398165] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: spermine oxidase-like] [Gene Type: protein-coding]","LOC107398165"]
[956,"NC_007422.5",3572471,"SNV","T","C","Homozygous",22,22,100,1,9,16,0.36,36.23,25,25,13,15,null,1,1,"no","C/C","No",1,86.13,"XP_973793.1:c.194T>C","XP_973793.1:p.Leu65Ser","LOC662614",662614,null,"662614 [Gene Symbol: LOC662614] [Locus Tag: TcasGA2_TC009643] [Chromosome: LG7] [Map Location: ] [Description: spermine oxidase] [Gene Type: protein-coding]","LOC662614; TcasGA2_TC009643"]
[957,"NC_007422.5",3581036,"SNV","G","A","Homozygous",28,28,100,1,11,17,0.39,36.18,28,28,11,17,null,1,1,"no","A/A","No",1,105.77,"XP_015837020.1:c.187C>T","XP_015837020.1:p.Leu63Phe","LOC662681",662681,null,"662681 [Gene Symbol: LOC662681] [Locus Tag: TcasGA2_TC009166] [Chromosome: LG7] [Map Location: ] [Description: lysine-specific histone demethylase 1A] [Gene Type: protein-coding]","TcasGA2_TC009166; LOC662681"]
[958,"NC_007422.5","3586300^3586301","Insertion","-","TTCAAC","Homozygous",20,20,100,1,11,9,0.45,38.59,20,20,9,15,null,1,1,"no","TTCAAC/TTCAAC","No",1,200,"XP_015836786.1:c.3099_3100insGTTGAA","XP_015836786.1:p.Thr1033_Lys1034insValGlu","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[959,"NC_007422.5",3589508,"SNV","C","G","Homozygous",20,20,100,1,16,6,0.27,37.4,22,22,13,15,null,1,1,"no","G/G","No",1,80.09,"XP_015836786.1:c.454G>C","XP_015836786.1:p.Asp152His","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[960,"NC_007422.5",3589510,"SNV","T","C","Homozygous",20,20,100,1,16,6,0.27,37.75,22,22,13,15,null,1,1,"no","C/C","No",1,80.12,"XP_015836786.1:c.452A>G","XP_015836786.1:p.Tyr151Cys","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[961,"NC_007422.5",3600847,"SNV","T","C","Homozygous",22,22,100,1,17,7,0.29,37.64,24,24,12,18,null,1,1,"no","C/C","No",1,86.13,"XP_015836787.1:c.80T>C","XP_015836787.1:p.Val27Ala","LOC662911",662911,null,"662911 [Gene Symbol: LOC662911] [Locus Tag: TcasGA2_TC009649] [Chromosome: LG7] [Map Location: ] [Description: HC-toxin synthetase] [Gene Type: protein-coding]","TcasGA2_TC009649; LOC662911"]
[962,"NC_007422.5",3601098,"SNV","G","A","Homozygous",21,21,100,1,16,10,0.38,38.33,26,26,13,17,null,1,1,"no","A/A","No",1,84.7,"XP_015836787.1:c.226G>A","XP_015836787.1:p.Val76Ile","LOC662911",662911,null,"662911 [Gene Symbol: LOC662911] [Locus Tag: TcasGA2_TC009649] [Chromosome: LG7] [Map Location: ] [Description: HC-toxin synthetase] [Gene Type: protein-coding]","TcasGA2_TC009649; LOC662911"]
[963,"NC_007422.5",3621944,"SNV","T","G","Homozygous",24,24,100,1,15,11,0.42,36.25,26,26,11,16,null,1,1,"no","G/G","No",1,92.13,"XP_015837002.1:c.[862A>C]; XP_008195443.1:c.[859A>C]; XP_008195442.1:c.[862A>C]","XP_015837002.1:p.[Lys288Gln]; XP_008195443.1:p.[Lys287Gln]; XP_008195442.1:p.[Lys288Gln]","LOC663050",663050,null,"663050 [Gene Symbol: LOC663050] [Locus Tag: TcasGA2_TC009162] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663050] [Gene Type: protein-coding]","TcasGA2_TC009162; LOC663050"]
[964,"NC_007422.5",3656189,"SNV","G","A","Homozygous",21,21,100,1,15,11,0.42,37,26,26,13,13,null,1,1,"no","A/A","No",1,84.7,"XP_974405.1:c.631G>A","XP_974405.1:p.Ala211Thr","LOC663256",663256,null,"663256 [Gene Symbol: LOC663256] [Locus Tag: TcasGA2_TC009659] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663256] [Gene Type: protein-coding]","LOC663256; TcasGA2_TC009659"]
[965,"NC_007422.5",3656286,"SNV","G","A","Homozygous",22,22,100,1,4,18,0.18,38.55,22,22,12,14,null,1,1,"no","A/A","No",1,87.7,"XP_974405.1:c.728G>A","XP_974405.1:p.Gly243Asp","LOC663256",663256,null,"663256 [Gene Symbol: LOC663256] [Locus Tag: TcasGA2_TC009659] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663256] [Gene Type: protein-coding]","LOC663256; TcasGA2_TC009659"]
[966,"NC_007422.5",3662213,"SNV","T","C","Homozygous",21,21,100,1,15,6,0.29,39.19,21,21,11,13,null,1,1,"no","C/C","No",1,83.12,"XP_974464.1:c.244A>G","XP_974464.1:p.Ile82Val","LOC663316",663316,null,"663316 [Gene Symbol: LOC663316] [Locus Tag: TcasGA2_TC009159] [Chromosome: LG7] [Map Location: ] [Description: ras-like GTP-binding protein rhoA] [Gene Type: protein-coding]","TcasGA2_TC009159; LOC663316"]
[967,"NC_007422.5",3669369,"SNV","T","C","Homozygous",23,23,100,1,8,16,0.33,36.09,24,24,13,12,null,1,1,"no","C/C","No",1,89.14,"XP_008195448.1:c.[107A>G]; XP_974516.2:c.[107A>G]; XP_008195449.1:c.[107A>G]","XP_008195448.1:p.[Asp36Gly]; XP_974516.2:p.[Asp36Gly]; XP_008195449.1:p.[Asp36Gly]","LOC663372",663372,null,"663372 [Gene Symbol: LOC663372] [Locus Tag: TcasGA2_TC009157] [Chromosome: LG7] [Map Location: ] [Description: dystroglycan] [Gene Type: protein-coding]","LOC663372; TcasGA2_TC009157"]
[968,"NC_007422.5",3810526,"SNV","G","A","Homozygous",22,22,100,1,16,7,0.3,37.64,23,23,9,14,null,1,1,"no","A/A","No",1,87.7,"XP_974755.2:c.1346C>T","XP_974755.2:p.Thr449Met","LOC663623",663623,null,"663623 [Gene Symbol: LOC663623] [Locus Tag: TcasGA2_TC009147] [Chromosome: LG7] [Map Location: ] [Description: CCR4-NOT transcription complex subunit 11] [Gene Type: protein-coding]","LOC663623; TcasGA2_TC009147"]
[969,"NC_007422.5",3898283,"SNV","T","C","Homozygous",21,21,100,1,10,12,0.45,37.81,22,22,13,15,null,1,1,"no","C/C","No",1,83.12,"XP_973091.2:c.958A>G","XP_973091.2:p.Ile320Val","LOC661866",661866,null,"661866 [Gene Symbol: LOC661866] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: UDP-glucuronosyltransferase 1-7] [Gene Type: protein-coding]","LOC661866"]
[970,"NC_007422.5",3933996,"SNV","G","T","Homozygous",20,20,100,1,17,8,0.32,35.9,25,25,10,15,null,1,1,"no","T/T","No",1,81.7,"XP_008200179.1:c.[1611G>T]; XP_008200178.1:c.[1611G>T]","XP_008200179.1:p.[Glu537Asp]; XP_008200178.1:p.[Glu537Asp]","LOC660079",660079,null,"660079 [Gene Symbol: LOC660079] [Locus Tag: TcasGA2_TC030765] [Chromosome: LG7] [Map Location: ] [Description: bromodomain adjacent to zinc finger domain protein 1A] [Gene Type: protein-coding]","LOC660079; TcasGA2_TC030765"]
[971,"NC_007422.5",3934178,"SNV","T","C","Homozygous",28,28,100,1,20,14,0.41,37.04,34,34,18,20,null,1,1,"no","C/C","No",1,104.19,"XP_008200179.1:c.[1793T>C]; XP_008200178.1:c.[1793T>C]","XP_008200179.1:p.[Val598Ala]; XP_008200178.1:p.[Val598Ala]","LOC660079",660079,null,"660079 [Gene Symbol: LOC660079] [Locus Tag: TcasGA2_TC030765] [Chromosome: LG7] [Map Location: ] [Description: bromodomain adjacent to zinc finger domain protein 1A] [Gene Type: protein-coding]","LOC660079; TcasGA2_TC030765"]
[972,"NC_007422.5",3989690,"SNV","C","T","Homozygous",20,20,100,1,8,17,0.32,38,25,25,11,14,null,1,1,"no","T/T","No",1,81.69,"XP_008200169.1:c.[7G>A]; XP_970826.2:c.[7G>A]","XP_008200169.1:p.[Glu3Lys]; XP_970826.2:p.[Glu3Lys]","LOC659425",659425,null,"659425 [Gene Symbol: LOC659425] [Locus Tag: TcasGA2_TC015954] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC659425] [Gene Type: protein-coding]","LOC659425; TcasGA2_TC015954"]
[973,"NC_007422.5",3999690,"SNV","A","G","Homozygous",21,21,100,1,4,18,0.18,38.9,22,22,10,12,null,1,1,"no","G/G","No",1,83.1,"XP_008200167.1:c.[1325A>G]; XP_008200166.1:c.[1550A>G]; XP_008200165.1:c.[1730A>G]; XP_970759.2:c.[1292A>G]; XP_008200164.1:c.[1769A>G]; XP_008200163.1:c.[1802A>G]","XP_008200167.1:p.[Lys442Arg]; XP_008200166.1:p.[Lys517Arg]; XP_008200165.1:p.[Lys577Arg]; XP_970759.2:p.[Lys431Arg]; XP_008200164.1:p.[Lys590Arg]; XP_008200163.1:p.[Lys601Arg]","LOC659350",659350,null,"659350 [Gene Symbol: LOC659350] [Locus Tag: TcasGA2_TC015895] [Chromosome: LG7] [Map Location: ] [Description: protein anoxia up-regulated] [Gene Type: protein-coding]","LOC659350; TcasGA2_TC015895"]
[975,"NC_007422.5",4086239,"SNV","T","C","Heterozygous",10,21,47.62,1,9,4,0.31,37.2,13,25,7,9,0.25,0.97,1,"no","C/T","No",1,82.63,"XP_001809235.1:c.1954A>G","XP_001809235.1:p.Ile652Val","LOC100142455",100142455,null,"100142455 [Gene Symbol: LOC100142455] [Locus Tag: TcasGA2_TC015944] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC100142455] [Gene Type: protein-coding]","LOC100142455; TcasGA2_TC015944"]
[976,"NC_007422.5",4089784,"SNV","G","C","Homozygous",21,21,100,1,8,15,0.35,38.33,23,23,13,11,null,1,1,"no","C/C","No",1,83.12,"XP_001809235.1:c.823C>G","XP_001809235.1:p.Arg275Gly","LOC100142455",100142455,null,"100142455 [Gene Symbol: LOC100142455] [Locus Tag: TcasGA2_TC015944] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC100142455] [Gene Type: protein-coding]","LOC100142455; TcasGA2_TC015944"]
[978,"NC_007422.5",4102069,"SNV","G","A","Heterozygous",12,20,60,1,4,9,0.31,36.67,13,21,8,9,-2.31,0.7,1,"no","A/G","No",1,60.04,"XP_966520.1:c.[341G>A]; XP_008200150.1:c.[957+1676C>T]","XP_966520.1:p.Arg114Gln","LOC103314846, LOC657073","103314846 , 657073",null,"103314846 [Gene Symbol: LOC103314846] [Locus Tag: TcasGA2_TC033620] [Chromosome: LG7] [Map Location: ] [Description: cleavage and polyadenylation specificity factor 73] [Gene Type: protein-coding] || 657073 [Gene Symbol: LOC657073] [Locus Tag: TcasGA2_TC015907] [Chromosome: LG7] [Map Location: ] [Description: delta(24)-sterol reductase] [Gene Type: protein-coding]","LOC103314846; TcasGA2_TC033620 || LOC657073; TcasGA2_TC015907"]
[979,"NC_007422.5",4102810,"SNV","T","C","Homozygous",29,29,100,1,15,19,0.44,37.79,34,34,21,24,null,1,1,"no","C/C","No",1,107.2,"XP_008200150.1:c.[957+935A>G]; XP_966520.1:c.[1082T>C]","XP_966520.1:p.Val361Ala","LOC103314846, LOC657073","103314846 , 657073",null,"103314846 [Gene Symbol: LOC103314846] [Locus Tag: TcasGA2_TC033620] [Chromosome: LG7] [Map Location: ] [Description: cleavage and polyadenylation specificity factor 73] [Gene Type: protein-coding] || 657073 [Gene Symbol: LOC657073] [Locus Tag: TcasGA2_TC015907] [Chromosome: LG7] [Map Location: ] [Description: delta(24)-sterol reductase] [Gene Type: protein-coding]","LOC103314846; TcasGA2_TC033620 || LOC657073; TcasGA2_TC015907"]
[980,"NC_007422.5",4119556,"SNV","G","T","Homozygous",31,31,100,1,17,16,0.48,37.03,33,33,14,17,null,1,1,"no","T/T","No",1,114.79,"XP_015836807.1:c.[216C>A]; XP_008200144.1:c.[216C>A]","XP_015836807.1:p.[Asp72Glu]; XP_008200144.1:p.[Asp72Glu]","LOC103314843",103314843,null,"103314843 [Gene Symbol: LOC103314843] [Locus Tag: TcasGA2_TC015939] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314843; TcasGA2_TC015939"]
[981,"NC_007422.5","4147041^4147042","Insertion","-","TG","Heterozygous",5,23,21.74,1,4,3,0.43,36.1,7,29,3,5,-0.75,0.68,1,"no","complex","No",1,200,"XP_968249.1:c.[1175_1176insCA]; XP_008200135.1:c.[1175_1176insCA]; XP_008200132.1:c.[1175_1176insCA]; XP_008200133.1:c.[1175_1176insCA]","XP_968249.1:p.[Ser393fs]; XP_008200135.1:p.[Ser393fs]; XP_008200132.1:p.[Ser393fs]; XP_008200133.1:p.[Ser393fs]","LOC656642",656642,null,"656642 [Gene Symbol: LOC656642] [Locus Tag: TcasGA2_TC033615] [Chromosome: LG7] [Map Location: ] [Description: myosin-11] [Gene Type: protein-coding]","LOC656642; TcasGA2_TC033615"]
[983,"NC_007422.5",4148233,"SNV","G","C","Homozygous",22,22,100,1,18,8,0.31,36.91,26,26,15,16,null,1,1,"no","C/C","No",1,86.13,"XP_008200132.1:c.[341C>G]; XP_008200135.1:c.[341C>G]; XP_008200133.1:c.[341C>G]; XP_968249.1:c.[341C>G]","XP_008200132.1:p.[Thr114Ser]; XP_008200135.1:p.[Thr114Ser]; XP_008200133.1:p.[Thr114Ser]; XP_968249.1:p.[Thr114Ser]","LOC656642",656642,null,"656642 [Gene Symbol: LOC656642] [Locus Tag: TcasGA2_TC033615] [Chromosome: LG7] [Map Location: ] [Description: myosin-11] [Gene Type: protein-coding]","LOC656642; TcasGA2_TC033615"]
[985,"NC_007422.5",4152406,"SNV","G","A","Heterozygous",8,23,34.78,1,4,4,0.5,39.62,8,28,5,7,1.81,0.29,1,"no","A/G","No",1,50.64,"XP_015836869.1:c.[211G>A]; XP_008200131.2:c.[211G>A]; XP_015836868.1:c.[211G>A]; XP_015836867.1:c.[211G>A]","XP_015836869.1:p.[Glu71Lys]; XP_008200131.2:p.[Glu71Lys]; XP_015836868.1:p.[Glu71Lys]; XP_015836867.1:p.[Glu71Lys]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[986,"NC_007422.5",4152547,"SNV","A","T","Heterozygous",16,32,50,1,12,4,0.25,38.19,16,35,10,12,0.41,0.56,0.85,"no","A/T","No",1,124.66,"XP_015836867.1:c.[352A>T]; XP_008200131.2:c.[352A>T]; XP_015836868.1:c.[352A>T]; XP_015836869.1:c.[352A>T]","XP_015836867.1:p.[Thr118Ser]; XP_008200131.2:p.[Thr118Ser]; XP_015836868.1:p.[Thr118Ser]; XP_015836869.1:p.[Thr118Ser]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[989,"NC_007422.5","4155663..4155664","MNV","GG","TT","Heterozygous",8,20,40,1,8,0,0,40,8,23,5,7,3.7,0.08,0.63,"no","complex","No",1,200,"XP_015836868.1:c.[3017_3018delGGinsTT]; XP_015836867.1:c.[3020_3021delGGinsTT]; XP_015836869.1:c.[2924_2925delGGinsTT]; XP_008200131.2:c.[3020_3021delGGinsTT]","XP_015836868.1:p.[Arg1006Ile]; XP_015836867.1:p.[Arg1007Ile]; XP_015836869.1:p.[Arg975Ile]; XP_008200131.2:p.[Arg1007Ile]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[994,"NC_007422.5",4206276,"SNV","G","C","Homozygous",20,20,100,1,12,9,0.43,37.5,21,21,9,16,null,1,1,"no","C/C","No",1,80.11,"XP_008200121.1:c.399C>G","XP_008200121.1:p.Asp133Glu","LOC655726",655726,null,"655726 [Gene Symbol: LOC655726] [Locus Tag: TcasGA2_TC033610] [Chromosome: LG7] [Map Location: ] [Description: GPI ethanolamine phosphate transferase 3] [Gene Type: protein-coding]","LOC655726; TcasGA2_TC033610"]
[995,"NC_007422.5","4382101..4382102","MNV","GA","AG","Homozygous",25,25,100,1,20,8,0.29,36.9,28,28,15,19,null,1,1,"no","AG/AG","No",1,200,"XP_966823.2:c.938_939delGAinsAG","XP_966823.2:p.Arg313Lys","LOC655214",655214,null,"655214 [Gene Symbol: LOC655214] [Locus Tag: TcasGA2_TC009681] [Chromosome: LG7] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","LOC655214; TcasGA2_TC009681"]
[996,"NC_007422.5",4618459,"SNV","A","T","Homozygous",24,24,100,1,14,13,0.48,38.67,27,27,14,15,null,1,1,"no","T/T","No",1,93.73,"XP_015836789.1:c.2630A>T","XP_015836789.1:p.Tyr877Phe","LOC655171",655171,null,"655171 [Gene Symbol: LOC655171] [Locus Tag: TcasGA2_TC009690] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655171] [Gene Type: protein-coding]","TcasGA2_TC009690; LOC655171"]
[997,"NC_007422.5",4618497,"SNV","A","C","Homozygous",22,22,100,1,9,15,0.38,38.55,24,24,12,14,null,1,1,"no","C/C","No",1,86.13,"XP_015836789.1:c.2668A>C","XP_015836789.1:p.Lys890Gln","LOC655171",655171,null,"655171 [Gene Symbol: LOC655171] [Locus Tag: TcasGA2_TC009690] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655171] [Gene Type: protein-coding]","TcasGA2_TC009690; LOC655171"]
[998,"NC_007422.5",4619389,"SNV","C","A","Homozygous",22,22,100,1,11,12,0.48,37.64,23,23,13,16,null,1,1,"no","A/A","No",1,87.71,"XP_015836789.1:c.3460C>A","XP_015836789.1:p.His1154Asn","LOC655171",655171,null,"655171 [Gene Symbol: LOC655171] [Locus Tag: TcasGA2_TC009690] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655171] [Gene Type: protein-coding]","TcasGA2_TC009690; LOC655171"]
[999,"NC_007422.5",4620536,"SNV","T","C","Heterozygous",12,29,41.38,1,8,6,0.43,37.08,14,31,8,10,-1.53,0.7,1,"no","C/T","No",1,86.21,"XP_967268.2:c.560T>C","XP_967268.2:p.Val187Ala","LOC655615",655615,null,"655615 [Gene Symbol: LOC655615] [Locus Tag: TcasGA2_TC009692] [Chromosome: LG7] [Map Location: ] [Description: acetylcholinesterase] [Gene Type: protein-coding]","LOC655615; TcasGA2_TC009692"]
[1000,"NC_007422.5",4624100,"SNV","T","C","Homozygous",23,23,100,1,15,9,0.38,37.78,24,24,11,17,null,1,1,"no","C/C","No",1,89.14,"XP_008195484.1:c.986T>C","XP_008195484.1:p.Val329Ala","LOC655695",655695,null,"655695 [Gene Symbol: LOC655695] [Locus Tag: TcasGA2_TC009693] [Chromosome: LG7] [Map Location: ] [Description: acetylcholinesterase] [Gene Type: protein-coding]","LOC655695; TcasGA2_TC009693"]
[1001,"NC_007422.5",4624430,"SNV","C","T","Homozygous",20,20,100,1,8,12,0.4,39.25,20,20,11,13,null,1,1,"no","T/T","No",1,81.69,"XP_008195484.1:c.1264C>T","XP_008195484.1:p.Leu422Phe","LOC655695",655695,null,"655695 [Gene Symbol: LOC655695] [Locus Tag: TcasGA2_TC009693] [Chromosome: LG7] [Map Location: ] [Description: acetylcholinesterase] [Gene Type: protein-coding]","LOC655695; TcasGA2_TC009693"]
[1002,"NC_007422.5","4648616..4648617","MNV","AT","GC","Heterozygous",20,44,45.45,1,19,7,0.27,37.82,26,53,18,17,-0.03,0.81,0.59,"no","complex","No",1,200,"XP_015836905.1:c.167_168delATinsGC","XP_015836905.1:p.Asn56Ser","LOC107398188",107398188,null,"107398188 [Gene Symbol: LOC107398188] [Locus Tag: TcasGA2_TC033628] [Chromosome: LG7] [Map Location: ] [Description: keratin-associated protein 5-7-like] [Gene Type: protein-coding]","LOC107398188; TcasGA2_TC033628"]
[1003,"NC_007422.5",4648622,"SNV","A","G","Heterozygous",21,44,47.73,1,18,9,0.33,37.43,27,52,17,14,-1.02,0.5,0.7,"no","A/G","No",1,156.54,"XP_015836905.1:c.173A>G","XP_015836905.1:p.Asn58Ser","LOC107398188",107398188,null,"107398188 [Gene Symbol: LOC107398188] [Locus Tag: TcasGA2_TC033628] [Chromosome: LG7] [Map Location: ] [Description: keratin-associated protein 5-7-like] [Gene Type: protein-coding]","LOC107398188; TcasGA2_TC033628"]
[1004,"NC_007422.5",4667892,"SNV","T","G","Homozygous",26,26,100,1,22,7,0.24,37.88,29,29,15,19,null,1,1,"no","G/G","No",1,98.15,"XP_968687.1:c.305A>C","XP_968687.1:p.Tyr102Ser","LOC657115",657115,null,"657115 [Gene Symbol: LOC657115] [Locus Tag: TcasGA2_TC009129] [Chromosome: LG7] [Map Location: ] [Description: microsomal glutathione S-transferase 1] [Gene Type: protein-coding]","TcasGA2_TC009129; LOC657115"]
[1005,"NC_007422.5",4667921,"SNV","C","A","Homozygous",22,22,100,1,15,11,0.42,36.05,26,26,14,16,null,1,1,"no","A/A","No",1,87.71,"XP_968687.1:c.276G>T","XP_968687.1:p.Trp92Cys","LOC657115",657115,null,"657115 [Gene Symbol: LOC657115] [Locus Tag: TcasGA2_TC009129] [Chromosome: LG7] [Map Location: ] [Description: microsomal glutathione S-transferase 1] [Gene Type: protein-coding]","TcasGA2_TC009129; LOC657115"]
[1006,"NC_007422.5",4708338,"SNV","A","G","Homozygous",21,21,100,1,14,7,0.33,38.95,21,21,15,15,null,1,1,"no","G/G","No",1,83.1,"XP_969201.1:c.1562A>G","XP_969201.1:p.Asn521Ser","LOC657661",657661,null,"657661 [Gene Symbol: LOC657661] [Locus Tag: TcasGA2_TC009707] [Chromosome: LG7] [Map Location: ] [Description: methionine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC657661; TcasGA2_TC009707"]
[1007,"NC_007422.5",4717206,"SNV","T","A","Homozygous",22,22,100,1,10,16,0.38,37,26,26,16,12,null,1,1,"no","A/A","No",1,87.72,"XP_008195511.1:c.1222A>T","XP_008195511.1:p.Ser408Cys","LOC657816",657816,null,"657816 [Gene Symbol: LOC657816] [Locus Tag: TcasGA2_TC033638] [Chromosome: LG7] [Map Location: ] [Description: leucine-rich repeat-containing protein 49] [Gene Type: protein-coding]","LOC657816; TcasGA2_TC033638"]
[1008,"NC_007422.5",4722549,"SNV","C","T","Homozygous",20,20,100,1,4,16,0.2,36.05,20,20,7,9,null,1,1,"no","T/T","No",1,81.7,"XP_969418.2:c.73G>A","XP_969418.2:p.Ala25Thr","LOC657898",657898,null,"657898 [Gene Symbol: LOC657898] [Locus Tag: TcasGA2_TC033639] [Chromosome: LG7] [Map Location: ] [Description: KAT8 regulatory NSL complex subunit 2] [Gene Type: protein-coding]","LOC657898; TcasGA2_TC033639"]
[1009,"NC_007422.5",4804387,"SNV","G","A","Homozygous",22,22,100,1,4,20,0.17,35.59,24,24,9,11,null,1,1,"no","A/A","No",1,87.7,"XP_015836986.1:c.[1100C>T]; XP_969857.1:c.[1100C>T]","XP_015836986.1:p.[Ala367Val]; XP_969857.1:p.[Ala367Val]","LOC658370",658370,null,"658370 [Gene Symbol: LOC658370] [Locus Tag: TcasGA2_TC009118] [Chromosome: LG7] [Map Location: ] [Description: putative ferric-chelate reductase 1 homolog] [Gene Type: protein-coding]","LOC658370; TcasGA2_TC009118"]
[1010,"NC_007422.5",4818700,"SNV","T","G","Homozygous",22,22,100,1,13,10,0.43,38.91,23,23,12,16,null,1,1,"no","G/G","No",1,86.11,"XP_008195517.1:c.[973A>C]; XP_008195516.1:c.[1000A>C]","XP_008195517.1:p.[Lys325Gln]; XP_008195516.1:p.[Lys334Gln]","LOC658443",658443,null,"658443 [Gene Symbol: LOC658443] [Locus Tag: TcasGA2_TC033642] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658443] [Gene Type: protein-coding]","TcasGA2_TC033642; LOC658443"]
[1011,"NC_007422.5",4844612,"SNV","A","T","Homozygous",21,21,100,1,7,15,0.32,38.05,22,22,11,14,null,1,1,"no","T/T","No",1,84.7,"XP_970457.1:c.415T>A","XP_970457.1:p.Cys139Ser","LOC659025",659025,null,"659025 [Gene Symbol: LOC659025] [Locus Tag: TcasGA2_TC009114] [Chromosome: LG7] [Map Location: ] [Description: RING finger protein nhl-1] [Gene Type: protein-coding]","LOC659025; TcasGA2_TC009114"]
[1012,"NC_007422.5",4861069,"SNV","C","T","Homozygous",20,20,100,1,11,9,0.45,37.5,20,20,9,13,null,1,1,"no","T/T","No",1,81.69,"XP_008195521.2:c.268G>A","XP_008195521.2:p.Val90Ile","LOC103313611",103313611,null,"103313611 [Gene Symbol: LOC103313611] [Locus Tag: TcasGA2_TC030549] [Chromosome: LG7] [Map Location: ] [Description: protein-cysteine N-palmitoyltransferase Rasp] [Gene Type: protein-coding]","TcasGA2_TC030549; LOC103313611"]
[1013,"NC_007422.5",4874387,"SNV","G","C","Homozygous",20,20,100,1,11,13,0.46,38.6,24,24,11,13,null,1,1,"no","C/C","No",1,80.12,"XP_015836813.1:c.983G>C","XP_015836813.1:p.Gly328Ala","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1014,"NC_007422.5",4875264,"SNV","T","A","Homozygous",25,25,100,1,18,9,0.33,35.24,27,27,11,15,null,1,1,"no","A/A","No",1,96.74,"XP_015836813.1:c.1763T>A","XP_015836813.1:p.Leu588*","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1015,"NC_007422.5",4875534,"SNV","T","A","Homozygous",21,21,100,1,5,17,0.23,40.24,22,22,12,13,null,1,1,"no","A/A","No",1,84.69,"XP_015836813.1:c.1985T>A","XP_015836813.1:p.Leu662*","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1016,"NC_007422.5",4877226,"SNV","G","A","Homozygous",20,20,100,1,13,8,0.38,38.5,21,21,10,14,null,1,1,"no","A/A","No",1,81.68,"XP_015836813.1:c.3677G>A","XP_015836813.1:p.Cys1226Tyr","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1017,"NC_007422.5",4877238,"SNV","C","T","Homozygous",20,20,100,1,14,8,0.36,38.5,22,22,8,15,null,1,1,"no","T/T","No",1,81.7,"XP_015836813.1:c.3689C>T","XP_015836813.1:p.Thr1230Ile","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1018,"NC_007422.5",4877637,"SNV","G","A","Homozygous",24,24,100,1,18,8,0.31,38.62,26,26,12,14,null,1,1,"no","A/A","No",1,93.72,"XP_015836813.1:c.4088G>A","XP_015836813.1:p.Arg1363Gln","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1019,"NC_007422.5",4877658,"SNV","T","C","Homozygous",35,35,100,1,25,19,0.43,36.71,44,44,20,22,null,1,1,"no","C/C","No",1,125.25,"XP_015836813.1:c.4109T>C","XP_015836813.1:p.Ile1370Thr","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1020,"NC_007422.5",4878657,"SNV","C","T","Homozygous",20,20,100,1,14,7,0.33,39.4,21,21,11,13,null,1,1,"no","T/T","No",1,81.69,"XP_015836813.1:c.5108C>T","XP_015836813.1:p.Ser1703Leu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1021,"NC_007422.5",4880028,"SNV","A","C","Homozygous",20,20,100,1,16,9,0.36,37.6,25,25,12,15,null,1,1,"no","C/C","No",1,80.12,"XP_015836813.1:c.6479A>C","XP_015836813.1:p.Glu2160Ala","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1022,"NC_007422.5",4880064,"SNV","T","C","Homozygous",23,23,100,1,18,8,0.31,37.04,26,26,16,17,null,1,1,"no","C/C","No",1,89.14,"XP_015836813.1:c.6515T>C","XP_015836813.1:p.Leu2172Pro","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1023,"NC_007422.5",4880277,"SNV","C","T","Homozygous",21,21,100,1,8,16,0.33,38.19,24,24,11,14,null,1,1,"no","T/T","No",1,84.7,"XP_015836813.1:c.6728C>T","XP_015836813.1:p.Thr2243Ile","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1024,"NC_007422.5",4880667,"SNV","C","T","Homozygous",23,23,100,1,14,11,0.44,37.39,25,25,17,14,null,1,1,"no","T/T","No",1,90.72,"XP_015836813.1:c.7118C>T","XP_015836813.1:p.Thr2373Ile","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1025,"NC_007422.5",4880682,"SNV","C","T","Homozygous",23,23,100,1,14,13,0.48,37.65,27,27,17,15,null,1,1,"no","T/T","No",1,90.72,"XP_015836813.1:c.7133C>T","XP_015836813.1:p.Ser2378Leu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1026,"NC_007422.5",4880751,"SNV","G","T","Homozygous",21,21,100,1,12,9,0.43,39.76,21,21,15,20,null,1,1,"no","T/T","No",1,84.7,"XP_015836813.1:c.7202G>T","XP_015836813.1:p.Arg2401Leu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1027,"NC_007422.5",4880934,"SNV","G","C","Homozygous",20,20,100,1,16,6,0.27,38.45,22,22,9,13,null,1,1,"no","C/C","No",1,80.12,"XP_015836813.1:c.7385G>C","XP_015836813.1:p.Arg2462Pro","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1028,"NC_007422.5",4880946,"SNV","T","A","Homozygous",22,22,100,1,17,7,0.29,37.86,24,24,10,15,null,1,1,"no","A/A","No",1,87.71,"XP_015836813.1:c.7397T>A","XP_015836813.1:p.Leu2466Gln","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1029,"NC_007422.5",4881135,"SNV","T","C","Homozygous",20,20,100,1,11,11,0.5,38.4,22,22,9,13,null,1,1,"no","C/C","No",1,80.12,"XP_015836813.1:c.7586T>C","XP_015836813.1:p.Ile2529Thr","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1030,"NC_007422.5",4881504,"SNV","G","A","Homozygous",23,23,100,1,12,12,0.5,38,24,24,17,18,null,1,1,"no","A/A","No",1,90.72,"XP_015836813.1:c.7955G>A","XP_015836813.1:p.Arg2652Lys","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1031,"NC_007422.5",4884642,"SNV","G","A","Homozygous",25,25,100,1,12,14,0.46,35.92,26,26,15,15,null,1,1,"no","A/A","No",1,96.74,"XP_015836813.1:c.11093G>A","XP_015836813.1:p.Arg3698Lys","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1032,"NC_007422.5",4884681,"SNV","T","C","Homozygous",30,30,100,1,18,15,0.45,38,33,33,16,19,null,1,1,"no","C/C","No",1,110.21,"XP_015836813.1:c.11132T>C","XP_015836813.1:p.Ile3711Thr","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1033,"NC_007422.5",4884693,"SNV","C","T","Homozygous",22,22,100,1,12,14,0.46,38.14,26,26,12,16,null,1,1,"no","T/T","No",1,87.71,"XP_015836813.1:c.11144C>T","XP_015836813.1:p.Ser3715Leu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1034,"NC_007422.5",4884720,"SNV","A","C","Homozygous",20,20,100,1,8,15,0.35,37.8,23,23,11,14,null,1,1,"no","C/C","No",1,80.12,"XP_015836813.1:c.11171A>C","XP_015836813.1:p.Glu3724Ala","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1035,"NC_007422.5",4884891,"SNV","T","C","Homozygous",25,25,100,1,8,19,0.3,36.12,27,27,12,17,null,1,1,"no","C/C","No",1,95.16,"XP_015836813.1:c.11342T>C","XP_015836813.1:p.Leu3781Pro","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[1036,"NC_007422.5",4890767,"SNV","T","C","Homozygous",26,26,100,1,18,13,0.42,36.88,31,31,14,22,null,1,1,"no","C/C","No",1,98.17,"XP_015836816.1:c.[542T>C]; XP_015836820.1:c.[512T>C]; XP_015836818.1:c.[527T>C]; XP_015836815.1:c.[557T>C]; XP_015836819.1:c.[527T>C]; XP_015836817.1:c.[527T>C]","XP_015836816.1:p.[Val181Ala]; XP_015836820.1:p.[Val171Ala]; XP_015836818.1:p.[Val176Ala]; XP_015836815.1:p.[Val186Ala]; XP_015836819.1:p.[Val176Ala]; XP_015836817.1:p.[Val176Ala]","LOC659661, LOC659733","659661 , 659733",null,"659661 [Gene Symbol: LOC659661] [Locus Tag: TcasGA2_TC009110] [Chromosome: LG7] [Map Location: ] [Description: trimeric intracellular cation channel type B] [Gene Type: protein-coding] || 659733 [Gene Symbol: LOC659733] [Locus Tag: TcasGA2_TC009720] [Chromosome: LG7] [Map Location: ] [Description: putative glycerol kinase 5] [Gene Type: protein-coding]","LOC659661; TcasGA2_TC009110 || LOC659733; TcasGA2_TC009720"]
[1037,"NC_007422.5","4891588^4891589","Insertion","-","C","Homozygous",21,21,100,1,9,13,0.41,38.95,22,22,12,16,null,1,1,"no","C/C","No",1,83.13,"XP_015836817.1:c.[1201_1202insC]; XP_015836820.1:c.[1186_1187insC]; XP_015836815.1:c.[1231_1232insC]; XP_015836819.1:c.[1201_1202insC]; XP_015836818.1:c.[1201_1202insC]; XP_015836816.1:c.[1216_1217insC]","XP_015836817.1:p.[Thr402fs]; XP_015836820.1:p.[Thr397fs]; XP_015836815.1:p.[Thr412fs]; XP_015836819.1:p.[Thr402fs]; XP_015836818.1:p.[Thr402fs]; XP_015836816.1:p.[Thr407fs]","LOC659661, LOC659733","659661 , 659733",null,"659661 [Gene Symbol: LOC659661] [Locus Tag: TcasGA2_TC009110] [Chromosome: LG7] [Map Location: ] [Description: trimeric intracellular cation channel type B] [Gene Type: protein-coding] || 659733 [Gene Symbol: LOC659733] [Locus Tag: TcasGA2_TC009720] [Chromosome: LG7] [Map Location: ] [Description: putative glycerol kinase 5] [Gene Type: protein-coding]","LOC659661; TcasGA2_TC009110 || LOC659733; TcasGA2_TC009720"]
[1038,"NC_007422.5",4891593,"Deletion","T","-","Homozygous",21,21,100,1,9,13,0.41,37.9,22,22,12,16,null,1,1,"no","-/-","No",1,93.72,"XP_015836816.1:c.[1221delT]; XP_015836819.1:c.[1206delT]; XP_015836815.1:c.[1236delT]; XP_015836817.1:c.[1206delT]; XP_015836818.1:c.[1206delT]; XP_015836820.1:c.[1191delT]","XP_015836816.1:p.[Asn409fs]; XP_015836819.1:p.[Asn404fs]; XP_015836815.1:p.[Asn414fs]; XP_015836817.1:p.[Asn404fs]; XP_015836818.1:p.[Asn404fs]; XP_015836820.1:p.[Asn399fs]","LOC659661, LOC659733","659661 , 659733",null,"659661 [Gene Symbol: LOC659661] [Locus Tag: TcasGA2_TC009110] [Chromosome: LG7] [Map Location: ] [Description: trimeric intracellular cation channel type B] [Gene Type: protein-coding] || 659733 [Gene Symbol: LOC659733] [Locus Tag: TcasGA2_TC009720] [Chromosome: LG7] [Map Location: ] [Description: putative glycerol kinase 5] [Gene Type: protein-coding]","LOC659661; TcasGA2_TC009110 || LOC659733; TcasGA2_TC009720"]
[1039,"NC_007422.5",4945042,"SNV","A","G","Homozygous",28,28,100,1,15,14,0.48,36.25,29,29,20,19,null,1,1,"no","G/G","No",1,104.16,"XP_008195544.1:c.[931A>G]; XP_015836900.1:c.[931A>G]; XP_008195542.1:c.[931A>G]","XP_008195544.1:p.[Ile311Val]; XP_015836900.1:p.[Ile311Val]; XP_008195542.1:p.[Ile311Val]","LOC660371",660371,null,"660371 [Gene Symbol: LOC660371] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: neuronal acetylcholine receptor subunit beta-3-like] [Gene Type: protein-coding]","LOC660371"]
[1040,"NC_007422.5",4980990,"SNV","A","G","Homozygous",20,20,100,1,13,16,0.45,37.7,29,29,10,17,null,1,1,"no","G/G","No",1,80.09,"XP_015836799.1:c.[11T>C]; XP_008195491.1:c.[11T>C]","XP_015836799.1:p.[Val4Ala]; XP_008195491.1:p.[Val4Ala]","LOC103313598",103313598,null,"103313598 [Gene Symbol: LOC103313598] [Locus Tag: TcasGA2_TC009104] [Chromosome: LG7] [Map Location: ] [Description: odorant receptor 198] [Gene Type: protein-coding]","Or198; TcasGA2_TC009104; LOC103313598"]
[1042,"NC_007422.5",5363231,"SNV","G","A","Homozygous",23,23,100,1,15,11,0.42,38.04,26,26,11,16,null,1,1,"no","A/A","No",1,90.72,"XP_008192724.1:c.55C>T","XP_008192724.1:p.Pro19Ser","LOC103312835",103312835,null,"103312835 [Gene Symbol: LOC103312835] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable methyltransferase-like protein 15 homolog] [Gene Type: protein-coding]","LOC103312835"]
[1043,"NC_007422.5",5363282,"SNV","G","A","Homozygous",23,23,100,1,11,13,0.46,37.3,24,24,12,17,null,1,1,"no","A/A","No",1,90.71,"XP_008192724.1:c.4C>T","XP_008192724.1:p.Leu2Phe","LOC103312835",103312835,null,"103312835 [Gene Symbol: LOC103312835] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable methyltransferase-like protein 15 homolog] [Gene Type: protein-coding]","LOC103312835"]
[1044,"NC_007422.5",6216552,"SNV","C","T","Homozygous",20,20,100,1,16,9,0.36,37.05,25,25,11,15,null,1,1,"no","T/T","No",1,81.69,"XP_008193789.1:c.[136-17745G>A]; XP_008193788.1:c.[136C>T]; XP_008193787.1:c.[142C>T]; XP_008193790.1:c.[19-17745G>A]; XP_015836940.1:c.[136-17745G>A]; XP_015836937.1:c.[136-17745G>A]; XP_015836939.1:c.[136-17745G>A]; XP_015836938.1:c.[82-17745G>A]","XP_008193788.1:p.[Arg46*]; XP_008193787.1:p.[Arg48*]","LOC103313127, LOC103313126","103313127 , 103313126",null,"103313127 [Gene Symbol: LOC103313127] [Locus Tag: TcasGA2_TC014523] [Chromosome: LG7] [Map Location: ] [Description: transcriptional-regulating factor 1] [Gene Type: protein-coding] || 103313126 [Gene Symbol: LOC103313126] [Locus Tag: TcasGA2_TC013289] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313126] [Gene Type: protein-coding]","LOC103313127; TcasGA2_TC014523 || LOC103313126; TcasGA2_TC013289"]
[1046,"NC_007422.5",6530637,"SNV","A","G","Homozygous",20,20,100,1,12,12,0.5,37.55,24,24,12,14,null,1,1,"no","G/G","No",1,80.09,"XP_008193779.1:c.[1028A>G]; XP_008193778.1:c.[1028A>G]","XP_008193779.1:p.[Lys343Arg]; XP_008193778.1:p.[Lys343Arg]","LOC659723",659723,null,"659723 [Gene Symbol: LOC659723] [Locus Tag: TcasGA2_TC013301] [Chromosome: LG7] [Map Location: ] [Description: transcriptional regulator ATRX homolog] [Gene Type: protein-coding]","TcasGA2_TC013301; LOC659723"]
[1047,"NC_007422.5",6530646,"SNV","A","C","Homozygous",21,21,100,1,13,12,0.48,37.81,25,25,13,14,null,1,1,"no","C/C","No",1,83.12,"XP_008193779.1:c.[1037A>C]; XP_008193778.1:c.[1037A>C]","XP_008193779.1:p.[Tyr346Ser]; XP_008193778.1:p.[Tyr346Ser]","LOC659723",659723,null,"659723 [Gene Symbol: LOC659723] [Locus Tag: TcasGA2_TC013301] [Chromosome: LG7] [Map Location: ] [Description: transcriptional regulator ATRX homolog] [Gene Type: protein-coding]","TcasGA2_TC013301; LOC659723"]
[1048,"NC_007422.5",6571035,"SNV","G","A","Homozygous",21,21,100,1,15,8,0.35,38.76,23,23,13,13,null,1,1,"no","A/A","No",1,84.69,"XP_008195366.2:c.1040C>T","XP_008195366.2:p.Pro347Leu","LOC661429",661429,null,"661429 [Gene Symbol: LOC661429] [Locus Tag: TcasGA2_TC009093] [Chromosome: LG7] [Map Location: ] [Description: transmembrane protease serine 9] [Gene Type: protein-coding]","TcasGA2_TC009093; LOC661429"]
[1049,"NC_007422.5",6571051,"SNV","T","C","Homozygous",22,22,100,1,15,9,0.38,37.45,24,24,14,14,null,1,1,"no","C/C","No",1,86.13,"XP_008195366.2:c.1024A>G","XP_008195366.2:p.Ile342Val","LOC661429",661429,null,"661429 [Gene Symbol: LOC661429] [Locus Tag: TcasGA2_TC009093] [Chromosome: LG7] [Map Location: ] [Description: transmembrane protease serine 9] [Gene Type: protein-coding]","TcasGA2_TC009093; LOC661429"]
[1050,"NC_007422.5",6656509,"SNV","G","T","Homozygous",22,22,100,1,12,10,0.45,38.18,22,22,9,14,null,1,1,"no","T/T","No",1,87.71,"XP_015837037.1:c.1435C>A","XP_015837037.1:p.His479Asn","LOC661733",661733,null,"661733 [Gene Symbol: LOC661733] [Locus Tag: TcasGA2_TC009087] [Chromosome: LG7] [Map Location: ] [Description: ankyrin repeat domain-containing protein 12] [Gene Type: protein-coding]","LOC661733; TcasGA2_TC009087"]
[1051,"NC_007422.5",6787107,"SNV","G","C","Homozygous",24,24,100,1,6,18,0.25,37.46,24,24,13,14,null,1,1,"no","C/C","No",1,92.15,"XP_008199980.1:c.[513+14707C>G]; XP_008199973.1:c.[195C>G]","XP_008199973.1:p.Asp65Glu","LOC657927, LOC103314807","657927 , 103314807",null,"657927 [Gene Symbol: LOC657927] [Locus Tag: TcasGA2_TC016381] [Chromosome: LG7] [Map Location: ] [Description: dynein regulatory complex subunit 7] [Gene Type: protein-coding] || 103314807 [Gene Symbol: LOC103314807] [Locus Tag: TcasGA2_TC016383] [Chromosome: LG7] [Map Location: ] [Description: protein distal antenna] [Gene Type: protein-coding]","LOC657927; TcasGA2_TC016381 || dan; LOC103314807; TcasGA2_TC016383"]
[1052,"NC_007422.5",7196118,"SNV","A","G","Homozygous",20,20,100,1,14,8,0.36,38.4,22,22,14,14,null,1,1,"no","G/G","No",1,80.09,"XP_008199730.2:c.3329T>C","XP_008199730.2:p.Leu1110Ser","LOC103314743",103314743,null,"103314743 [Gene Symbol: LOC103314743] [Locus Tag: ] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: sodium/hydrogen exchanger 10-like] [Gene Type: protein-coding]","LOC103314743"]
[1053,"NC_007422.5",7295433,"SNV","C","T","Homozygous",21,21,100,1,15,6,0.29,38.05,21,21,15,16,null,1,1,"no","T/T","No",1,84.7,"XP_015837170.1:c.[8821G>A]; XP_015837183.1:c.[8821G>A]; XP_008199741.1:c.[8644G>A]; XP_015837174.1:c.[8821G>A]; XP_015837192.1:c.[8821G>A]; XP_015837195.1:c.[4690G>A]; XP_015837188.1:c.[8821G>A]; XP_015837187.1:c.[8641G>A]; XP_015837177.1:c.[8719G>A]; XP_015837173.1:c.[8746G>A]; XP_015837180.1:c.[8707G>A]; XP_015837171.1:c.[8767G>A]; XP_015837191.1:c.[8617G>A]; XP_015837167.1:c.[8803G>A]; XP_015837185.1:c.[8821G>A]; XP_015837166.1:c.[8821G>A]; XP_015837168.1:c.[8797G>A]; XP_015837176.1:c.[8728G>A]; XP_008199749.1:c.[8617G>A]; XP_015837175.1:c.[8743G>A]; XP_015837194.1:c.[8821G>A]; XP_015837179.1:c.[8821G>A]; XP_015837165.1:c.[8821G>A]; XP_015837196.1:c.[4848+3973G>A]; XP_015837189.1:c.[8821G>A]; XP_015837172.1:c.[8821G>A]; XP_008199748.1:c.[8644G>A]; XP_015837197.1:c.[8722G>A]; XP_015837190.1:c.[8821G>A]; XP_015837169.1:c.[8785G>A]; XP_015837186.1:c.[8644G>A]; XP_015837182.1:c.[8821G>A]; XP_015837184.1:c.[8668G>A]; XP_015837181.1:c.[8704G>A]; XP_008199742.1:c.[8617G>A]; XP_008199740.1:c.[8704G>A]; XP_015837178.1:c.[8821G>A]; XP_015837193.1:c.[8821G>A]; XP_015837198.1:c.[4848+3973G>A]","XP_015837170.1:p.[Val2941Ile]; XP_015837183.1:p.[Val2941Ile]; XP_008199741.1:p.[Val2882Ile]; XP_015837174.1:p.[Val2941Ile]; XP_015837192.1:p.[Val2941Ile]; XP_015837195.1:p.[Val1564Ile]; XP_015837188.1:p.[Val2941Ile]; XP_015837187.1:p.[Val2881Ile]; XP_015837177.1:p.[Val2907Ile]; XP_015837173.1:p.[Val2916Ile]; XP_015837180.1:p.[Val2903Ile]; XP_015837171.1:p.[Val2923Ile]; XP_015837191.1:p.[Val2873Ile]; XP_015837167.1:p.[Val2935Ile]; XP_015837185.1:p.[Val2941Ile]; XP_015837166.1:p.[Val2941Ile]; XP_015837168.1:p.[Val2933Ile]; XP_015837176.1:p.[Val2910Ile]; XP_008199749.1:p.[Val2873Ile]; XP_015837175.1:p.[Val2915Ile]; XP_015837194.1:p.[Val2941Ile]; XP_015837179.1:p.[Val2941Ile]; XP_015837165.1:p.[Val2941Ile]; XP_015837189.1:p.[Val2941Ile]; XP_015837172.1:p.[Val2941Ile]; XP_008199748.1:p.[Val2882Ile]; XP_015837197.1:p.[Val2908Ile]; XP_015837190.1:p.[Val2941Ile]; XP_015837169.1:p.[Val2929Ile]; XP_015837186.1:p.[Val2882Ile]; XP_015837182.1:p.[Val2941Ile]; XP_015837184.1:p.[Val2890Ile]; XP_015837181.1:p.[Val2902Ile]; XP_008199742.1:p.[Val2873Ile]; XP_008199740.1:p.[Val2902Ile]; XP_015837178.1:p.[Val2941Ile]; XP_015837193.1:p.[Val2941Ile]","LOC662585",662585,null,"662585 [Gene Symbol: LOC662585] [Locus Tag: TcasGA2_TC009076] [Chromosome: LG7] [Map Location: ] [Description: microtubule-actin cross-linking factor 1] [Gene Type: protein-coding]","TcasGA2_TC009076; LOC662585"]
[1054,"NC_007422.5",7297310,"SNV","T","C","Homozygous",22,22,100,1,16,9,0.36,38.91,25,25,11,18,null,1,1,"no","C/C","No",1,86.14,"XP_008199740.1:c.[6827A>G]; XP_015837189.1:c.[6944A>G]; XP_015837183.1:c.[6944A>G]; XP_015837179.1:c.[6944A>G]; XP_015837185.1:c.[6944A>G]; XP_015837193.1:c.[6944A>G]; XP_008199742.1:c.[6740A>G]; XP_015837184.1:c.[6791A>G]; XP_015837192.1:c.[6944A>G]; XP_015837176.1:c.[6851A>G]; XP_015837178.1:c.[6944A>G]; XP_008199748.1:c.[6767A>G]; XP_008199741.1:c.[6767A>G]; XP_015837173.1:c.[6869A>G]; XP_015837195.1:c.[2813A>G]; XP_015837168.1:c.[6920A>G]; XP_015837190.1:c.[6944A>G]; XP_015837196.1:c.[4848+2096A>G]; XP_015837166.1:c.[6944A>G]; XP_015837182.1:c.[6944A>G]; XP_015837197.1:c.[6845A>G]; XP_015837172.1:c.[6944A>G]; XP_015837188.1:c.[6944A>G]; XP_015837174.1:c.[6944A>G]; XP_015837181.1:c.[6827A>G]; XP_015837198.1:c.[4848+2096A>G]; XP_015837177.1:c.[6842A>G]; XP_015837187.1:c.[6764A>G]; XP_015837194.1:c.[6944A>G]; XP_015837175.1:c.[6866A>G]; XP_015837169.1:c.[6908A>G]; XP_015837165.1:c.[6944A>G]; XP_008199749.1:c.[6740A>G]; XP_015837180.1:c.[6830A>G]; XP_015837170.1:c.[6944A>G]; XP_015837171.1:c.[6890A>G]; XP_015837191.1:c.[6740A>G]; XP_015837167.1:c.[6926A>G]; XP_015837186.1:c.[6767A>G]","XP_008199740.1:p.[Lys2276Arg]; XP_015837189.1:p.[Lys2315Arg]; XP_015837183.1:p.[Lys2315Arg]; XP_015837179.1:p.[Lys2315Arg]; XP_015837185.1:p.[Lys2315Arg]; XP_015837193.1:p.[Lys2315Arg]; XP_008199742.1:p.[Lys2247Arg]; XP_015837184.1:p.[Lys2264Arg]; XP_015837192.1:p.[Lys2315Arg]; XP_015837176.1:p.[Lys2284Arg]; XP_015837178.1:p.[Lys2315Arg]; XP_008199748.1:p.[Lys2256Arg]; XP_008199741.1:p.[Lys2256Arg]; XP_015837173.1:p.[Lys2290Arg]; XP_015837195.1:p.[Lys938Arg]; XP_015837168.1:p.[Lys2307Arg]; XP_015837190.1:p.[Lys2315Arg]; XP_015837166.1:p.[Lys2315Arg]; XP_015837182.1:p.[Lys2315Arg]; XP_015837197.1:p.[Lys2282Arg]; XP_015837172.1:p.[Lys2315Arg]; XP_015837188.1:p.[Lys2315Arg]; XP_015837174.1:p.[Lys2315Arg]; XP_015837181.1:p.[Lys2276Arg]; XP_015837177.1:p.[Lys2281Arg]; XP_015837187.1:p.[Lys2255Arg]; XP_015837194.1:p.[Lys2315Arg]; XP_015837175.1:p.[Lys2289Arg]; XP_015837169.1:p.[Lys2303Arg]; XP_015837165.1:p.[Lys2315Arg]; XP_008199749.1:p.[Lys2247Arg]; XP_015837180.1:p.[Lys2277Arg]; XP_015837170.1:p.[Lys2315Arg]; XP_015837171.1:p.[Lys2297Arg]; XP_015837191.1:p.[Lys2247Arg]; XP_015837167.1:p.[Lys2309Arg]; XP_015837186.1:p.[Lys2256Arg]","LOC662585",662585,null,"662585 [Gene Symbol: LOC662585] [Locus Tag: TcasGA2_TC009076] [Chromosome: LG7] [Map Location: ] [Description: microtubule-actin cross-linking factor 1] [Gene Type: protein-coding]","TcasGA2_TC009076; LOC662585"]
[1055,"NC_007422.5",8096154,"SNV","C","T","Homozygous",20,20,100,1,15,5,0.25,38,20,20,8,16,null,1,1,"no","T/T","No",1,81.69,"XP_008195575.1:c.[50C>T]; XP_008195574.1:c.[50C>T]","XP_008195575.1:p.[Ser17Leu]; XP_008195574.1:p.[Ser17Leu]","LOC656529",656529,null,"656529 [Gene Symbol: LOC656529] [Locus Tag: TcasGA2_TC009782] [Chromosome: LG7] [Map Location: ] [Description: transcriptional repressor p66-alpha] [Gene Type: protein-coding]","LOC656529; TcasGA2_TC009782"]
[1056,"NC_007422.5",8124661,"SNV","A","G","Homozygous",22,22,100,1,9,18,0.33,38.86,27,27,12,14,null,1,1,"no","G/G","No",1,86.11,"XP_015837668.1:c.1456A>G","XP_015837668.1:p.Ser486Gly","LOC656776",656776,null,"656776 [Gene Symbol: LOC656776] [Locus Tag: TcasGA2_TC009785] [Chromosome: LG7] [Map Location: ] [Description: putative fatty acyl-CoA reductase CG5065] [Gene Type: protein-coding]","TcasGA2_TC009785; LOC656776"]
[1057,"NC_007422.5",8125677,"SNV","A","G","Homozygous",22,22,100,1,16,7,0.3,38.73,23,23,10,17,null,1,1,"no","G/G","No",1,86.11,"XP_968460.1:c.271A>G","XP_968460.1:p.Asn91Asp","LOC656867",656867,null,"656867 [Gene Symbol: LOC656867] [Locus Tag: TcasGA2_TC009786] [Chromosome: LG7] [Map Location: ] [Description: serine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC656867; TcasGA2_TC009786"]
[1058,"NC_007422.5",8216467,"SNV","A","G","Homozygous",25,25,100,1,14,14,0.5,38.16,28,28,13,17,null,1,1,"no","G/G","No",1,95.14,"XP_008195592.1:c.461A>G","XP_008195592.1:p.Asn154Ser","LOC103313622",103313622,null,"103313622 [Gene Symbol: LOC103313622] [Locus Tag: TcasGA2_TC009795] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC009795; LOC103313622"]
[1059,"NC_007422.5",8283581,"SNV","C","G","Homozygous",24,24,100,1,5,20,0.2,38.5,25,25,10,13,null,1,1,"no","G/G","No",1,92.13,"XP_015837295.1:c.[1755C>G]; XP_015837296.1:c.[1707C>G]; XP_015837298.1:c.[1755C>G]; XP_015837297.1:c.[1755C>G]; XP_015837299.1:c.[1755C>G]","XP_015837295.1:p.[Ile585Met]; XP_015837296.1:p.[Ile569Met]; XP_015837298.1:p.[Ile585Met]; XP_015837297.1:p.[Ile585Met]; XP_015837299.1:p.[Ile585Met]","LOC100142047",100142047,null,"100142047 [Gene Symbol: LOC100142047] [Locus Tag: TcasGA2_TC009801] [Chromosome: LG7] [Map Location: ] [Description: inaD-like protein] [Gene Type: protein-coding]","LOC100142047; TcasGA2_TC009801"]
[1060,"NC_007422.5",8330363,"SNV","C","G","Homozygous",21,21,100,1,8,15,0.35,38.05,23,23,12,15,null,1,1,"no","G/G","No",1,83.1,"XP_970065.3:c.3531C>G","XP_970065.3:p.Asn1177Lys","LOC658596",658596,null,"658596 [Gene Symbol: LOC658596] [Locus Tag: TcasGA2_TC009803] [Chromosome: LG7] [Map Location: ] [Description: nuclear pore membrane glycoprotein 210] [Gene Type: protein-coding]","LOC658596; TcasGA2_TC009803"]
[1061,"NC_007422.5",8529177,"SNV","G","A","Homozygous",21,21,100,1,17,11,0.39,36.33,28,28,13,11,null,1,1,"no","A/A","No",1,84.7,"XP_015837059.1:c.4273G>A","XP_015837059.1:p.Gly1425Ser","LOC107398214",107398214,null,"107398214 [Gene Symbol: LOC107398214] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","LOC107398214"]
[1062,"NC_007422.5",8661332,"SNV","C","G","Homozygous",23,23,100,1,15,8,0.35,38.83,23,23,9,14,null,1,1,"no","G/G","No",1,89.12,"XP_015837060.1:c.1852G>C","XP_015837060.1:p.Val618Leu","LOC661002",661002,null,"661002 [Gene Symbol: LOC661002] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: lactase-phlorizin hydrolase-like] [Gene Type: protein-coding]","LOC661002"]
[1063,"NC_007422.5",8721166,"SNV","A","T","Homozygous",21,21,100,1,9,14,0.39,36.52,23,23,9,10,null,1,1,"no","T/T","No",1,84.71,"XP_015837310.1:c.[170+42416A>T]; XP_015837311.1:c.[125+42416A>T]; XP_015837308.1:c.[252A>T]","XP_015837308.1:p.Glu84Asp","LOC661337",661337,null,"661337 [Gene Symbol: LOC661337] [Locus Tag: TcasGA2_TC009826] [Chromosome: LG7] [Map Location: ] [Description: protein prickle-like] [Gene Type: protein-coding]","LOC661337; TcasGA2_TC009826"]
[1064,"NC_007422.5",8809383,"SNV","G","A","Homozygous",21,21,100,1,18,3,0.14,36.05,21,21,11,14,null,1,1,"no","A/A","No",1,84.7,"XP_008195647.1:c.704G>A","XP_008195647.1:p.Arg235Lys","LOC661430",661430,null,"661430 [Gene Symbol: LOC661430] [Locus Tag: TcasGA2_TC009831] [Chromosome: LG7] [Map Location: ] [Description: endoplasmic reticulum metallopeptidase 1] [Gene Type: protein-coding]","TcasGA2_TC009831; LOC661430"]
[1065,"NC_007422.5",8809619,"SNV","T","C","Homozygous",23,23,100,1,6,17,0.26,35.09,23,23,11,16,null,1,1,"no","C/C","No",1,89.12,"XP_008195647.1:c.940T>C","XP_008195647.1:p.Tyr314His","LOC661430",661430,null,"661430 [Gene Symbol: LOC661430] [Locus Tag: TcasGA2_TC009831] [Chromosome: LG7] [Map Location: ] [Description: endoplasmic reticulum metallopeptidase 1] [Gene Type: protein-coding]","TcasGA2_TC009831; LOC661430"]
[1066,"NC_007422.5",8915464,"SNV","A","G","Homozygous",20,20,100,1,9,14,0.39,38.15,23,23,11,11,null,1,1,"no","G/G","No",1,80.09,"XP_008195651.1:c.[628T>C]; XP_973340.3:c.[628T>C]","XP_008195651.1:p.[Ser210Pro]; XP_973340.3:p.[Ser210Pro]","LOC662130",662130,null,"662130 [Gene Symbol: LOC662130] [Locus Tag: TcasGA2_TC009001] [Chromosome: LG7] [Map Location: ] [Description: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase] [Gene Type: protein-coding]","TcasGA2_TC009001; LOC662130"]
[1067,"NC_007422.5",8968748,"SNV","C","T","Homozygous",24,24,100,1,15,12,0.44,35.88,27,27,10,15,null,1,1,"no","T/T","No",1,93.73,"XP_015837113.1:c.[91G>A]; XP_015837114.1:c.[91G>A]; XP_008195658.1:c.[91G>A]","XP_015837113.1:p.[Asp31Asn]; XP_015837114.1:p.[Asp31Asn]; XP_008195658.1:p.[Asp31Asn]","LOC662382",662382,null,"662382 [Gene Symbol: LOC662382] [Locus Tag: TcasGA2_TC008998] [Chromosome: LG7] [Map Location: ] [Description: RNA-binding protein Nova-1] [Gene Type: protein-coding]","LOC662382; TcasGA2_TC008998"]
[1068,"NC_007422.5",8973673,"SNV","T","C","Homozygous",22,22,100,1,12,13,0.48,37.73,25,25,15,16,null,1,1,"no","C/C","No",1,86.13,"XP_008195657.1:c.[13T>C]; XP_008195656.1:c.[13T>C]","XP_008195657.1:p.[Trp5Arg]; XP_008195656.1:p.[Trp5Arg]","LOC662417",662417,null,"662417 [Gene Symbol: LOC662417] [Locus Tag: TcasGA2_TC009844] [Chromosome: LG7] [Map Location: ] [Description: cystatin] [Gene Type: protein-coding]","TcasGA2_TC009844; LOC662417"]
[1069,"NC_007422.5",8974130,"SNV","C","T","Homozygous",20,20,100,1,13,12,0.48,37.85,25,25,12,14,null,1,1,"no","T/T","No",1,78.69,"XP_008195656.1:c.[377C>T]; XP_008195657.1:c.[377C>T]","XP_008195656.1:p.[Pro126Leu]; XP_008195657.1:p.[Pro126Leu]","LOC662417",662417,null,"662417 [Gene Symbol: LOC662417] [Locus Tag: TcasGA2_TC009844] [Chromosome: LG7] [Map Location: ] [Description: cystatin] [Gene Type: protein-coding]","TcasGA2_TC009844; LOC662417"]
[1070,"NC_007422.5",8988879,"SNV","G","A","Homozygous",22,22,100,1,18,7,0.28,38.41,25,25,11,17,null,1,1,"no","A/A","No",1,87.71,"XP_008195661.1:c.2050G>A","XP_008195661.1:p.Val684Ile","LOC662556",662556,null,"662556 [Gene Symbol: LOC662556] [Locus Tag: TcasGA2_TC009846] [Chromosome: LG7] [Map Location: ] [Description: 5'-3' exoribonuclease 2 homolog] [Gene Type: protein-coding]","LOC662556; TcasGA2_TC009846"]
[1071,"NC_007422.5",9066172,"SNV","C","T","Homozygous",22,22,100,1,7,15,0.32,37.77,22,22,14,11,null,1,1,"no","T/T","No",1,87.71,"XP_008195672.2:c.1225C>T","XP_008195672.2:p.Arg409Cys","LOC662742",662742,null,"662742 [Gene Symbol: LOC662742] [Locus Tag: TcasGA2_TC009849] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 260] [Gene Type: protein-coding]","TcasGA2_TC009849; LOC662742"]
[1072,"NC_007422.5",9066175,"SNV","G","A","Homozygous",21,21,100,1,7,14,0.33,37.05,21,21,13,10,null,1,1,"no","A/A","No",1,84.7,"XP_008195672.2:c.1228G>A","XP_008195672.2:p.Ala410Thr","LOC662742",662742,null,"662742 [Gene Symbol: LOC662742] [Locus Tag: TcasGA2_TC009849] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 260] [Gene Type: protein-coding]","TcasGA2_TC009849; LOC662742"]
[1073,"NC_007422.5",9066182,"SNV","A","C","Homozygous",22,22,100,1,8,15,0.35,38.41,23,23,15,13,null,1,1,"no","C/C","No",1,86.14,"XP_008195672.2:c.1235A>C","XP_008195672.2:p.Glu412Ala","LOC662742",662742,null,"662742 [Gene Symbol: LOC662742] [Locus Tag: TcasGA2_TC009849] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 260] [Gene Type: protein-coding]","TcasGA2_TC009849; LOC662742"]
[1074,"NC_007422.5",9066190,"SNV","C","T","Homozygous",27,27,100,1,9,18,0.33,37.33,27,27,17,16,null,1,1,"no","T/T","No",1,102.76,"XP_008195672.2:c.1243C>T","XP_008195672.2:p.Gln415*","LOC662742",662742,null,"662742 [Gene Symbol: LOC662742] [Locus Tag: TcasGA2_TC009849] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 260] [Gene Type: protein-coding]","TcasGA2_TC009849; LOC662742"]
[1075,"NC_007422.5",9083202,"SNV","G","C","Homozygous",30,30,100,1,12,18,0.4,37.5,30,30,10,19,null,1,1,"no","C/C","No",1,110.2,"XP_015837247.1:c.[411C>G]; XP_008195676.1:c.[411C>G]; XP_008195675.1:c.[411C>G]; XP_008195674.1:c.[411C>G]; XP_015837248.1:c.[411C>G]","XP_015837247.1:p.[Asp137Glu]; XP_008195676.1:p.[Asp137Glu]; XP_008195675.1:p.[Asp137Glu]; XP_008195674.1:p.[Asp137Glu]; XP_015837248.1:p.[Asp137Glu]","LOC662829",662829,null,"662829 [Gene Symbol: LOC662829] [Locus Tag: TcasGA2_TC008993] [Chromosome: LG7] [Map Location: ] [Description: metastasis suppressor protein 1] [Gene Type: protein-coding]","TcasGA2_TC008993; LOC662829"]
[1076,"NC_007422.5",9143172,"SNV","C","T","Homozygous",20,20,100,1,15,6,0.29,36.5,21,21,13,13,null,1,1,"no","T/T","No",1,81.7,"XP_974133.1:c.[250G>A]; XP_015837252.1:c.[54-3333G>A]","XP_974133.1:p.Val84Ile","LOC662885, LOC103313642, LOC662972","662885 , 103313642 , 662972",null,"662885 [Gene Symbol: LOC662885] [Locus Tag: TcasGA2_TC008992] [Chromosome: LG7] [Map Location: ] [Description: CCR4-NOT transcription complex subunit 10] [Gene Type: protein-coding] || 103313642 [Gene Symbol: LOC103313642] [Locus Tag: TcasGA2_TC008988] [Chromosome: LG7] [Map Location: ] [Description: homologous-pairing protein 2 homolog] [Gene Type: protein-coding] || 662972 [Gene Symbol: LOC662972] [Locus Tag: TcasGA2_TC033717] [Chromosome: LG7] [Map Location: ] [Description: transmembrane protein 14C] [Gene Type: protein-coding]","TcasGA2_TC008992; LOC662885 || TcasGA2_TC008988; LOC103313642 || LOC662972; TcasGA2_TC033717"]
[1077,"NC_007422.5",9387182,"SNV","A","C","Homozygous",23,23,100,1,8,15,0.35,38.17,23,23,12,15,null,1,1,"no","C/C","No",1,89.14,"XP_008196037.1:c.[2186A>C]; XP_008196036.1:c.[2186A>C]","XP_008196037.1:p.[Glu729Ala]; XP_008196036.1:p.[Glu729Ala]","LOC103313737",103313737,null,"103313737 [Gene Symbol: LOC103313737] [Locus Tag: TcasGA2_TC008741] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313737] [Gene Type: protein-coding]","LOC103313737; TcasGA2_TC008741"]
[1078,"NC_007422.5",9387191,"SNV","G","T","Homozygous",21,21,100,1,4,18,0.18,37.62,22,22,12,13,null,1,1,"no","T/T","No",1,84.7,"XP_008196037.1:c.[2195G>T]; XP_008196036.1:c.[2195G>T]","XP_008196037.1:p.[Gly732Val]; XP_008196036.1:p.[Gly732Val]","LOC103313737",103313737,null,"103313737 [Gene Symbol: LOC103313737] [Locus Tag: TcasGA2_TC008741] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313737] [Gene Type: protein-coding]","LOC103313737; TcasGA2_TC008741"]
[1079,"NC_007422.5","9571756..9571757","MNV","CA","AG","Homozygous",20,20,100,1,20,2,0.09,39.08,22,22,8,16,null,1,1,"no","AG/AG","No",1,200,"XP_015837063.1:c.657_658delTGinsCT","XP_015837063.1:p.Ala220Ser","LOC664594, LOC103313748","664594 , 103313748",null,"664594 [Gene Symbol: LOC664594] [Locus Tag: TcasGA2_TC008758] [Chromosome: LG7] [Map Location: ] [Description: calbindin-32] [Gene Type: protein-coding] || 103313748 [Gene Symbol: LOC103313748] [Locus Tag: TcasGA2_TC010069] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313748] [Gene Type: protein-coding]","LOC664594; TcasGA2_TC008758 || LOC103313748; TcasGA2_TC010069; OBP-C07; TcOBP7L"]
[1080,"NC_007422.5",9588777,"SNV","G","A","Homozygous",21,22,95.45,1,9,16,0.36,38.67,25,26,14,15,null,1,1,"no","A/A","No",1,55.87,"XP_975685.1:c.385G>A","XP_975685.1:p.Val129Ile","LOC664594, LOC664596","664594 , 664596",null,"664594 [Gene Symbol: LOC664594] [Locus Tag: TcasGA2_TC008758] [Chromosome: LG7] [Map Location: ] [Description: calbindin-32] [Gene Type: protein-coding] || 664596 [Gene Symbol: LOC664596] [Locus Tag: TcasGA2_TC008757] [Chromosome: LG7] [Map Location: ] [Description: odorant binding protein (subfamily minus-C) C04] [Gene Type: protein-coding]","LOC664594; TcasGA2_TC008758 || TcOBP7E; OBP-C04; TcasGA2_TC008757; LOC664596"]
[1081,"NC_007422.5",9610336,"SNV","C","T","Homozygous",21,21,100,1,6,15,0.29,35.57,21,21,10,14,null,1,1,"no","T/T","No",1,84.71,"XP_008196062.1:c.659C>T","XP_008196062.1:p.Ala220Val","LOC103313746",103313746,null,"103313746 [Gene Symbol: LOC103313746] [Locus Tag: TcasGA2_TC008761] [Chromosome: LG7] [Map Location: ] [Description: vanin-like protein 1] [Gene Type: protein-coding]","LOC103313746; TcasGA2_TC008761"]
[1084,"NC_007422.5",9685353,"SNV","A","G","Heterozygous",9,22,40.91,1,5,6,0.45,35.78,11,25,5,6,-0.9,0.98,0.95,"no","A/G","No",1,67.22,"XP_015837064.1:c.1057A>G","XP_015837064.1:p.Thr353Ala","LOC664584",664584,null,"664584 [Gene Symbol: LOC664584] [Locus Tag: TcasGA2_TC008769] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664584] [Gene Type: protein-coding]","TcasGA2_TC008769; LOC664584"]
[1085,"NC_007422.5",9692896,"SNV","T","A","Homozygous",20,20,100,1,17,6,0.26,37.65,23,23,11,11,null,1,1,"no","A/A","No",1,81.69,"XP_015837065.1:c.[766-1320A>T]; XP_015837590.1:c.[1291A>T]; XP_015837589.1:c.[1369A>T]","XP_015837590.1:p.[Thr431Ser]; XP_015837589.1:p.[Thr457Ser]","LOC664580, LOC664581","664580 , 664581",null,"664580 [Gene Symbol: LOC664580] [Locus Tag: TcasGA2_TC010054] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664580] [Gene Type: protein-coding] || 664581 [Gene Symbol: LOC664581] [Locus Tag: TcasGA2_TC033823] [Chromosome: LG7] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2-like] [Gene Type: protein-coding]","LOC664580; TcasGA2_TC010054 || TcasGA2_TC033823; LOC664581"]
[1086,"NC_007422.5","9732889..9732890","MNV","CT","TA","Heterozygous",8,27,29.63,1,3,7,0.3,39.12,10,29,8,8,null,0.63,1,"no","complex","No",1,200,"XP_975667.1:c.1453_1454delCTinsTA","XP_975667.1:p.Leu485Tyr","LOC664578",664578,null,"664578 [Gene Symbol: LOC664578] [Locus Tag: TcasGA2_TC008773] [Chromosome: LG7] [Map Location: ] [Description: structural maintenance of chromosomes protein 5] [Gene Type: protein-coding]","LOC664578; TcasGA2_TC008773"]
[1087,"NC_007422.5","9732889..9732890","MNV","CT","TG","Heterozygous",19,27,70.37,1,6,13,0.32,38.84,19,29,9,10,null,0.85,1,"no","complex","No",1,200,"XP_975667.1:c.1453_1454delCTinsTG","XP_975667.1:p.Leu485Cys","LOC664578",664578,null,"664578 [Gene Symbol: LOC664578] [Locus Tag: TcasGA2_TC008773] [Chromosome: LG7] [Map Location: ] [Description: structural maintenance of chromosomes protein 5] [Gene Type: protein-coding]","LOC664578; TcasGA2_TC008773"]
[1088,"NC_007422.5","9733743..9733744","MNV","AG","TA","Heterozygous",5,22,22.73,1,4,1,0.2,38.1,5,22,4,5,-1.09,0.41,0.25,"no","complex","No",1,200,"XP_975667.1:c.2160_2161delAGinsTA","XP_975667.1:p.Val721Ile","LOC664578",664578,null,"664578 [Gene Symbol: LOC664578] [Locus Tag: TcasGA2_TC008773] [Chromosome: LG7] [Map Location: ] [Description: structural maintenance of chromosomes protein 5] [Gene Type: protein-coding]","LOC664578; TcasGA2_TC008773"]
[1089,"NC_007422.5",9734215,"SNV","G","C","Heterozygous",12,24,50,1,6,8,0.43,36.58,14,27,8,7,-1.62,0.3,0.85,"no","C/G","No",1,95.85,"XP_975667.1:c.2632G>C","XP_975667.1:p.Gly878Arg","LOC664578",664578,null,"664578 [Gene Symbol: LOC664578] [Locus Tag: TcasGA2_TC008773] [Chromosome: LG7] [Map Location: ] [Description: structural maintenance of chromosomes protein 5] [Gene Type: protein-coding]","LOC664578; TcasGA2_TC008773"]
[1090,"NC_007422.5",9734702,"SNV","C","T","Heterozygous",10,22,45.45,1,1,9,0.1,36.4,10,23,7,7,-2.18,0.36,0.82,"no","C/T","No",1,78.8,"XP_975667.1:c.3119C>T","XP_975667.1:p.Ala1040Val","LOC664578",664578,null,"664578 [Gene Symbol: LOC664578] [Locus Tag: TcasGA2_TC008773] [Chromosome: LG7] [Map Location: ] [Description: structural maintenance of chromosomes protein 5] [Gene Type: protein-coding]","LOC664578; TcasGA2_TC008773"]
[1091,"NC_007422.5",9736653,"SNV","C","T","Heterozygous",8,22,36.36,1,5,3,0.38,38.38,8,22,4,6,-0.07,0.05,0.66,"no","C/T","No",1,53.46,"XP_975666.1:c.1403G>A","XP_975666.1:p.Arg468Lys","LOC664577",664577,null,"664577 [Gene Symbol: LOC664577] [Locus Tag: TcasGA2_TC010052] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","TcasGA2_TC010052; LOC664577"]
[1092,"NC_007422.5",9736671,"SNV","T","C","Homozygous",26,26,100,1,22,8,0.27,38.23,30,30,20,14,null,1,1,"no","C/C","No",1,98.17,"XP_975666.1:c.1385A>G","XP_975666.1:p.Glu462Gly","LOC664577",664577,null,"664577 [Gene Symbol: LOC664577] [Locus Tag: TcasGA2_TC010052] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","TcasGA2_TC010052; LOC664577"]
[1093,"NC_007422.5",9737661,"SNV","T","C","Heterozygous",19,29,65.52,1,15,6,0.29,37.63,21,32,13,16,-0.73,0.85,1,"no","C/T","No",1,59.34,"XP_975666.1:c.502A>G","XP_975666.1:p.Lys168Glu","LOC664577",664577,null,"664577 [Gene Symbol: LOC664577] [Locus Tag: TcasGA2_TC010052] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","TcasGA2_TC010052; LOC664577"]
[1094,"NC_007422.5",9737886,"SNV","T","G","Heterozygous",9,20,45,1,2,7,0.22,38.22,9,24,6,6,2.32,0.86,0.61,"no","G/T","No",1,72.34,"XP_975666.1:c.277A>C","XP_975666.1:p.Asn93His","LOC664577",664577,null,"664577 [Gene Symbol: LOC664577] [Locus Tag: TcasGA2_TC010052] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","TcasGA2_TC010052; LOC664577"]
[1095,"NC_007422.5","9738187..9738189","Deletion","AGC","-","Heterozygous",15,23,65.22,1,3,12,0.2,39.07,15,24,6,6,1.44,0.44,0.81,"no","complex","No",1,200,"XP_975666.1:c.21_23delGCT","XP_975666.1:p.Leu8del","LOC664577",664577,null,"664577 [Gene Symbol: LOC664577] [Locus Tag: TcasGA2_TC010052] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","TcasGA2_TC010052; LOC664577"]
[1097,"NC_007422.5",9741627,"SNV","C","T","Homozygous",20,20,100,1,12,14,0.46,35.6,26,26,14,17,null,1,1,"no","T/T","No",1,81.7,"XP_015837080.1:c.[667G>A]; XP_975665.2:c.[664G>A]","XP_015837080.1:p.[Ala223Thr]; XP_975665.2:p.[Ala222Thr]","LOC664576",664576,null,"664576 [Gene Symbol: LOC664576] [Locus Tag: TcasGA2_TC010051] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","LOC664576; TcasGA2_TC010051"]
[1099,"NC_007422.5",9836230,"SNV","A","G","Heterozygous",13,22,59.09,1,10,9,0.47,37.54,19,29,5,8,-0.87,0.25,0.91,"no","A/G","No",1,66.25,"XP_975649.1:c.31A>G","XP_975649.1:p.Met11Val","LOC664560",664560,null,"664560 [Gene Symbol: LOC664560] [Locus Tag: TcasGA2_TC008781] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase] [Gene Type: protein-coding]","LOC664560; TcasGA2_TC008781"]
[1100,"NC_007422.5",9862662,"SNV","G","C","Homozygous",20,20,100,1,16,11,0.41,36.8,27,27,10,14,null,1,1,"no","C/C","No",1,80.11,"XP_975633.1:c.374C>G","XP_975633.1:p.Ala125Gly","LOC664544",664544,null,"664544 [Gene Symbol: LOC664544] [Locus Tag: TcasGA2_TC010046] [Chromosome: LG7] [Map Location: ] [Description: protein PRRC1-A] [Gene Type: protein-coding]","LOC664544; TcasGA2_TC010046"]
[1101,"NC_007422.5","9871651..9871652","MNV","CA","GC","Heterozygous",8,21,38.1,1,0,8,0,39.19,8,24,2,3,1.26,0.06,0.38,"no","complex","No",1,200,"XP_008195999.1:c.[427_428delCAinsGC]; XP_015837199.1:c.[427_428delCAinsGC]","XP_008195999.1:p.[Gln143Ala]; XP_015837199.1:p.[Gln143Ala]","LOC664538",664538,null,"664538 [Gene Symbol: LOC664538] [Locus Tag: TcasGA2_TC008787] [Chromosome: LG7] [Map Location: ] [Description: anoctamin-8] [Gene Type: protein-coding]","LOC664538; TcasGA2_TC008787"]
[1102,"NC_007422.5",9878324,"SNV","G","A","Heterozygous",9,22,40.91,1,0,9,0,38.89,9,23,5,7,0.2,0.25,0.19,"no","A/G","No",1,66.27,"XP_008196000.1:c.1246C>T","XP_008196000.1:p.Pro416Ser","LOC664536",664536,null,"664536 [Gene Symbol: LOC664536] [Locus Tag: TcasGA2_TC010044] [Chromosome: LG7] [Map Location: ] [Description: alanine--tRNA ligase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC010044; LOC664536"]
[1103,"NC_007422.5","9894849..9894850","MNV","TA","AG","Homozygous",20,20,100,1,9,13,0.41,39.49,22,22,11,14,null,1,1,"no","AG/AG","No",1,200,"XP_015837070.1:c.82_83delTAinsCT","XP_015837070.1:p.Tyr28Leu","LOC107398216",107398216,null,"107398216 [Gene Symbol: LOC107398216] [Locus Tag: TcasGA2_TC030200] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398216] [Gene Type: protein-coding]","TcasGA2_TC030200; LOC107398216; TcGr108; TcGr109"]
[1104,"NC_007422.5",9910609,"SNV","C","G","Homozygous",20,20,100,1,12,9,0.43,37.3,21,21,10,12,null,1,1,"no","G/G","No",1,80.09,"XP_008195995.1:c.45C>G","XP_008195995.1:p.Ile15Met","LOC103313726",103313726,null,"103313726 [Gene Symbol: LOC103313726] [Locus Tag: TcasGA2_TC033815] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313726] [Gene Type: protein-coding]","LOC103313726; TcasGA2_TC033815"]
[1105,"NC_007422.5","9912836..9912837","MNV","CA","AT","Homozygous",21,21,100,1,13,12,0.48,36.66,25,25,17,18,null,1,1,"no","AT/AT","No",1,200,"XP_015837543.1:c.[1118_1119delTGinsAT]; XP_015837544.1:c.[863_864delTGinsAT]","XP_015837543.1:p.[Met373Asn]; XP_015837544.1:p.[Met288Asn]","LOC664529",664529,null,"664529 [Gene Symbol: LOC664529] [Locus Tag: TcasGA2_TC010040] [Chromosome: LG7] [Map Location: ] [Description: patj homolog] [Gene Type: protein-coding]","TcasGA2_TC010040; LOC664529"]
[1106,"NC_007422.5","9912853^9912854","Insertion","-","T","Homozygous",20,20,100,1,10,15,0.4,37.15,25,25,11,15,null,1,1,"no","T/T","No",1,78.69,"XP_015837544.1:c.[846_847insA]; XP_015837543.1:c.[1101_1102insA]","XP_015837544.1:p.[Pro283fs]; XP_015837543.1:p.[Pro368fs]","LOC664529",664529,null,"664529 [Gene Symbol: LOC664529] [Locus Tag: TcasGA2_TC010040] [Chromosome: LG7] [Map Location: ] [Description: patj homolog] [Gene Type: protein-coding]","TcasGA2_TC010040; LOC664529"]
[1108,"NC_007422.5",10023074,"SNV","G","A","Homozygous",20,20,100,1,17,5,0.23,37.85,22,22,11,13,null,1,1,"no","A/A","No",1,81.69,"XP_975585.1:c.880G>A","XP_975585.1:p.Val294Ile","LOC664490",664490,null,"664490 [Gene Symbol: LOC664490] [Locus Tag: TcasGA2_TC008800] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664490] [Gene Type: protein-coding]","TcasGA2_TC008800; LOC664490"]
[1109,"NC_007422.5",10061395,"SNV","C","T","Homozygous",23,23,100,1,22,4,0.15,39,26,26,11,19,null,1,1,"no","T/T","No",1,90.72,"XP_008195982.2:c.374G>A","XP_008195982.2:p.Arg125His","LOC103313724",103313724,null,"103313724 [Gene Symbol: LOC103313724] [Locus Tag: TcasGA2_TC010028] [Chromosome: LG7] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 2] [Gene Type: protein-coding]","LOC103313724; TcasGA2_TC010028"]
[1110,"NC_007422.5",10061653,"SNV","T","A","Homozygous",23,23,100,1,10,20,0.33,37.78,30,30,13,13,null,1,1,"no","A/A","No",1,90.71,"XP_008195982.2:c.163A>T","XP_008195982.2:p.Ile55Phe","LOC103313724",103313724,null,"103313724 [Gene Symbol: LOC103313724] [Locus Tag: TcasGA2_TC010028] [Chromosome: LG7] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 2] [Gene Type: protein-coding]","LOC103313724; TcasGA2_TC010028"]
[1111,"NC_007422.5",10085578,"SNV","T","G","Homozygous",20,20,100,1,13,11,0.46,37.4,24,24,8,12,null,1,1,"no","G/G","No",1,80.09,"XP_008195972.1:c.369A>C","XP_008195972.1:p.Gln123His","LOC664472",664472,null,"664472 [Gene Symbol: LOC664472] [Locus Tag: TcasGA2_TC010024] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: endocytosis protein end4] [Gene Type: protein-coding]","TcasGA2_TC010024; LOC664472"]
[1112,"NC_007422.5",10093010,"SNV","C","T","Heterozygous",13,21,61.9,1,4,9,0.31,37.85,13,22,6,8,-2.1,0.72,0.95,"no","C/T","No",1,57.42,"XP_008195969.1:c.[1099-151G>A]; XP_015837642.1:c.[1220G>A]; XP_015837641.1:c.[1174-151G>A]; XP_975566.1:c.[1174-151G>A]","XP_015837642.1:p.Ser407Asn","LOC664468",664468,null,"664468 [Gene Symbol: LOC664468] [Locus Tag: TcasGA2_TC010021] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664468] [Gene Type: protein-coding]","LOC664468; TcasGA2_TC010021"]
[1113,"NC_007422.5",10105082,"SNV","T","A","Homozygous",40,40,100,1,26,21,0.45,38.12,47,47,15,21,null,1,1,"no","A/A","No",1,141.84,"XP_008195969.1:c.[510A>T]; XP_015837641.1:c.[585A>T]; XP_015837642.1:c.[585A>T]; XP_975566.1:c.[585A>T]","XP_008195969.1:p.[Gln170His]; XP_015837641.1:p.[Gln195His]; XP_015837642.1:p.[Gln195His]; XP_975566.1:p.[Gln195His]","LOC664468",664468,null,"664468 [Gene Symbol: LOC664468] [Locus Tag: TcasGA2_TC010021] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664468] [Gene Type: protein-coding]","LOC664468; TcasGA2_TC010021"]
[1114,"NC_007422.5",10105089,"SNV","A","G","Homozygous",39,39,100,1,24,21,0.47,37.9,45,45,15,20,null,1,1,"no","G/G","No",1,137.24,"XP_015837642.1:c.[578T>C]; XP_008195969.1:c.[503T>C]; XP_015837641.1:c.[578T>C]; XP_975566.1:c.[578T>C]","XP_015837642.1:p.[Leu193Pro]; XP_008195969.1:p.[Leu168Pro]; XP_015837641.1:p.[Leu193Pro]; XP_975566.1:p.[Leu193Pro]","LOC664468",664468,null,"664468 [Gene Symbol: LOC664468] [Locus Tag: TcasGA2_TC010021] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664468] [Gene Type: protein-coding]","LOC664468; TcasGA2_TC010021"]
[1118,"NC_007422.5",10391477,"SNV","A","G","Homozygous",21,21,100,1,17,7,0.29,38.76,24,24,11,14,null,1,1,"no","G/G","No",1,83.1,"XP_975551.3:c.161A>G","XP_975551.3:p.Asn54Ser","LOC664452",664452,null,"664452 [Gene Symbol: LOC664452] [Locus Tag: TcasGA2_TC008819] [Chromosome: LG7] [Map Location: ] [Description: nuclear pore complex protein Nup133] [Gene Type: protein-coding]","LOC664452; TcasGA2_TC008819"]
[1122,"NC_007422.5",10421561,"SNV","A","G","Homozygous",20,20,100,1,7,16,0.3,36.4,23,23,12,14,null,1,1,"no","G/G","No",1,80.09,"XP_008196051.1:c.7973T>C","XP_008196051.1:p.Val2658Ala","LOC664436",664436,null,"664436 [Gene Symbol: LOC664436] [Locus Tag: TcasGA2_TC010007] [Chromosome: LG7] [Map Location: ] [Description: centromere-associated protein E] [Gene Type: protein-coding]","LOC664436; TcasGA2_TC010007"]
[1123,"NC_007422.5",10502182,"SNV","T","A","Homozygous",21,21,100,1,14,8,0.36,36.29,22,22,10,17,null,1,1,"no","A/A","No",1,84.7,"XP_008195959.1:c.[1293A>T]; XP_008195958.1:c.[1293A>T]; XP_008195960.1:c.[1293A>T]; XP_015837351.1:c.[1204+167A>T]","XP_008195959.1:p.[Glu431Asp]; XP_008195958.1:p.[Glu431Asp]; XP_008195960.1:p.[Glu431Asp]","LOC664426",664426,null,"664426 [Gene Symbol: LOC664426] [Locus Tag: TcasGA2_TC010001] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC010001; LOC664426"]
[1124,"NC_007422.5",10524084,"SNV","T","G","Homozygous",22,22,100,1,15,9,0.38,38.77,24,24,16,15,null,1,1,"no","G/G","No",1,86.11,"XP_975520.3:c.541A>C","XP_975520.3:p.Lys181Gln","LOC664420",664420,null,"664420 [Gene Symbol: LOC664420] [Locus Tag: TcasGA2_TC030216] [Chromosome: LG7] [Map Location: ] [Description: gustatory receptor candidate 11] [Gene Type: protein-coding]","LOC664420; TcGr125; TcasGA2_TC030216; gr11; gr55"]
[1125,"NC_007422.5",10546914,"SNV","C","T","Homozygous",20,20,100,1,4,16,0.2,35.35,20,20,11,12,null,1,1,"no","T/T","No",1,81.7,"XP_008195939.1:c.[269G>A]; XP_975509.1:c.[269G>A]","XP_008195939.1:p.[Ser90Asn]; XP_975509.1:p.[Ser90Asn]","LOC664409",664409,null,"664409 [Gene Symbol: LOC664409] [Locus Tag: TcasGA2_TC009997] [Chromosome: LG7] [Map Location: ] [Description: delta-aminolevulinic acid dehydratase] [Gene Type: protein-coding]","LOC664409; TcasGA2_TC009997"]
[1126,"NC_007422.5",10606828,"SNV","C","T","Homozygous",20,20,100,1,7,13,0.35,36.65,20,20,11,11,null,1,1,"no","T/T","No",1,81.7,"XP_975486.1:c.[3381+2492C>T]; XP_008195928.1:c.[3399+2492C>T]; XP_015837368.1:c.[796G>A]","XP_015837368.1:p.Val266Ile","LOC664386, LOC107398284","664386 , 107398284",null,"664386 [Gene Symbol: LOC664386] [Locus Tag: TcasGA2_TC008835] [Chromosome: LG7] [Map Location: ] [Description: probable Rho GTPase-activating protein CG5521] [Gene Type: protein-coding] || 107398284 [Gene Symbol: LOC107398284] [Locus Tag: TcasGA2_TC009993] [Chromosome: LG7] [Map Location: ] [Description: katanin p60 ATPase-containing subunit A-like 2] [Gene Type: protein-coding]","LOC664386; TcasGA2_TC008835 || TcasGA2_TC009993; LOC107398284"]
[1127,"NC_007422.5",10661224,"SNV","C","G","Homozygous",22,22,100,1,16,7,0.3,39.14,23,23,17,18,null,1,1,"no","G/G","No",1,86.11,"XP_015837354.1:c.[1972C>G]; XP_008195910.1:c.[1927C>G]","XP_015837354.1:p.[Gln658Glu]; XP_008195910.1:p.[Gln643Glu]","LOC664373",664373,null,"664373 [Gene Symbol: LOC664373] [Locus Tag: TcasGA2_TC008839] [Chromosome: LG7] [Map Location: ] [Description: integrin alpha-PS4] [Gene Type: protein-coding]","LOC664373; TcasGA2_TC008839"]
[1128,"NC_007422.5",10661229,"SNV","A","T","Homozygous",25,25,100,1,18,8,0.31,38.56,26,26,19,20,null,1,1,"no","T/T","No",1,96.73,"XP_015837354.1:c.[1977A>T]; XP_008195910.1:c.[1932A>T]","XP_015837354.1:p.[Leu659Phe]; XP_008195910.1:p.[Leu644Phe]","LOC664373",664373,null,"664373 [Gene Symbol: LOC664373] [Locus Tag: TcasGA2_TC008839] [Chromosome: LG7] [Map Location: ] [Description: integrin alpha-PS4] [Gene Type: protein-coding]","LOC664373; TcasGA2_TC008839"]
[1130,"NC_007422.5",11283081,"SNV","A","G","Homozygous",20,20,100,1,8,12,0.4,38.8,20,20,8,12,null,1,1,"no","G/G","No",1,80.09,"XP_975104.2:c.368T>C","XP_975104.2:p.Ile123Thr","LOC663986",663986,null,"663986 [Gene Symbol: LOC663986] [Locus Tag: TcasGA2_TC009964] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663986] [Gene Type: protein-coding]","LOC663986; TcasGA2_TC009964"]
[1131,"NC_007422.5",11314613,"SNV","C","T","Homozygous",21,21,100,1,13,9,0.41,39.38,22,22,11,14,null,1,1,"no","T/T","No",1,84.7,"XP_015837335.1:c.[1996G>A]; XP_015837337.1:c.[1795G>A]; XP_015837334.1:c.[2038G>A]; XP_015837336.1:c.[2038G>A]; XP_015837338.1:c.[1726G>A]","XP_015837335.1:p.[Gly666Ser]; XP_015837337.1:p.[Gly599Ser]; XP_015837334.1:p.[Gly680Ser]; XP_015837336.1:p.[Gly680Ser]; XP_015837338.1:p.[Gly576Ser]","LOC663866",663866,null,"663866 [Gene Symbol: LOC663866] [Locus Tag: TcasGA2_TC009960] [Chromosome: LG7] [Map Location: ] [Description: ADAMTS-like protein 1] [Gene Type: protein-coding]","TcasGA2_TC009960; LOC663866"]
[1132,"NC_007422.5",11347439,"SNV","G","A","Homozygous",21,21,100,1,12,12,0.5,35.76,24,24,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_975881.1:c.[133G>A]; XP_015837334.1:c.[321+7020C>T]; XP_015837335.1:c.[321+7020C>T]; XP_015837336.1:c.[321+7020C>T]","XP_975881.1:p.Ala45Thr","LOC663866, LOC662285","663866 , 662285",null,"663866 [Gene Symbol: LOC663866] [Locus Tag: TcasGA2_TC009960] [Chromosome: LG7] [Map Location: ] [Description: ADAMTS-like protein 1] [Gene Type: protein-coding] || 662285 [Gene Symbol: LOC662285] [Locus Tag: TcasGA2_TC008889] [Chromosome: LG7] [Map Location: ] [Description: larval/pupal cuticle protein H1C] [Gene Type: protein-coding]","TcasGA2_TC009960; LOC663866 || LOC662285; TcasGA2_TC008889"]
[1133,"NC_007422.5",11589284,"SNV","T","C","Homozygous",21,21,100,1,11,13,0.46,37.38,24,24,9,12,null,1,1,"no","C/C","No",1,83.12,"XP_015837100.1:c.[2255T>C]; XP_008195836.1:c.[2255T>C]; XP_015837102.1:c.[2246T>C]; XP_015837099.1:c.[2255T>C]; XP_008195835.1:c.[2255T>C]; XP_015837101.1:c.[2252T>C]","XP_015837100.1:p.[Phe752Ser]; XP_008195836.1:p.[Phe752Ser]; XP_015837102.1:p.[Phe749Ser]; XP_015837099.1:p.[Phe752Ser]; XP_008195835.1:p.[Phe752Ser]; XP_015837101.1:p.[Phe751Ser]","LOC663550",663550,null,"663550 [Gene Symbol: LOC663550] [Locus Tag: TcasGA2_TC008907] [Chromosome: LG7] [Map Location: ] [Description: WD repeat, SAM and U-box domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC008907; LOC663550"]
[1134,"NC_007422.5",11670887,"SNV","C","A","Homozygous",20,20,100,1,13,9,0.41,37.05,22,22,12,16,null,1,1,"no","A/A","No",1,81.69,"XP_008195826.1:c.526C>A","XP_008195826.1:p.Pro176Thr","LOC103313687, LOC663405","103313687 , 663405",null,"103313687 [Gene Symbol: LOC103313687] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313687] [Gene Type: ncRNA] || 663405 [Gene Symbol: LOC663405] [Locus Tag: TcasGA2_TC008910] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313687 || TcasGA2_TC008910; LOC663405"]
[1135,"NC_007422.5",11670990,"SNV","G","T","Homozygous",25,25,100,1,12,13,0.48,38.8,25,25,12,12,null,1,1,"no","T/T","No",1,96.73,"XP_008195826.1:c.629G>T","XP_008195826.1:p.Ser210Ile","LOC103313687, LOC663405","103313687 , 663405",null,"103313687 [Gene Symbol: LOC103313687] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313687] [Gene Type: ncRNA] || 663405 [Gene Symbol: LOC663405] [Locus Tag: TcasGA2_TC008910] [Chromosome: LG7] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313687 || TcasGA2_TC008910; LOC663405"]
[1136,"NC_007422.5",11778830,"SNV","T","C","Homozygous",28,28,100,1,7,23,0.23,38.43,30,30,15,16,null,1,1,"no","C/C","No",1,104.18,"XP_974255.1:c.238A>G","XP_974255.1:p.Asn80Asp","LOC663101",663101,null,"663101 [Gene Symbol: LOC663101] [Locus Tag: TcasGA2_TC031204] [Chromosome: LG7] [Map Location: ] [Description: ethanolaminephosphotransferase 1-like] [Gene Type: protein-coding]","LOC663101; TcasGA2_TC031204"]
[1137,"NC_007422.5",11885394,"SNV","C","G","Homozygous",21,21,100,1,10,14,0.42,38.52,24,24,10,17,null,1,1,"no","G/G","No",1,83.1,"XP_008195802.1:c.[3575G>C]; XP_015837463.1:c.[2861G>C]","XP_008195802.1:p.[Ser1192Thr]; XP_015837463.1:p.[Ser954Thr]","LOC100142360",100142360,null,"100142360 [Gene Symbol: LOC100142360] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC100142360] [Gene Type: protein-coding]","LOC100142360"]
[1138,"NC_007422.5",11950759,"SNV","A","G","Homozygous",23,23,100,1,9,16,0.36,37.65,25,25,12,14,null,1,1,"no","G/G","No",1,89.12,"XP_008195789.1:c.4927A>G","XP_008195789.1:p.Thr1643Ala","LOC662516",662516,null,"662516 [Gene Symbol: LOC662516] [Locus Tag: TcasGA2_TC008923] [Chromosome: LG7] [Map Location: ] [Description: myosin 22] [Gene Type: protein-coding]","TcasGA2_TC008923; LOC662516; Myo22"]
[1139,"NC_007422.5",12240247,"SNV","G","A","Homozygous",22,22,100,1,10,17,0.37,38.59,27,27,13,15,null,1,1,"no","A/A","No",1,87.7,"XP_973158.1:c.1078G>A","XP_973158.1:p.Gly360Ser","LOC661935",661935,null,"661935 [Gene Symbol: LOC661935] [Locus Tag: TcasGA2_TC008935] [Chromosome: LG7] [Map Location: ] [Description: protein NEDD1] [Gene Type: protein-coding]","TcasGA2_TC008935; LOC661935"]
[1140,"NC_007422.5",12656418,"SNV","C","G","Homozygous",21,21,100,1,10,13,0.43,38.67,23,23,11,13,null,1,1,"no","G/G","No",1,83.1,"XP_015837615.1:c.[1617G>C]; XP_008195764.1:c.[1935G>C]","XP_015837615.1:p.[Glu539Asp]; XP_008195764.1:p.[Glu645Asp]","LOC661218",661218,null,"661218 [Gene Symbol: LOC661218] [Locus Tag: TcasGA2_TC009891] [Chromosome: LG7] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC661218; TcasGA2_TC009891"]
[1144,"NC_007422.5","12799999^12800000","Insertion","-","AAC","Heterozygous",10,23,43.48,1,6,6,0.5,36.23,12,26,5,7,-0.94,0.9,0.98,"no","complex","No",1,200,"XP_008195740.2:c.[2556_2557insAAC]; XP_008195741.2:c.[2550_2551insAAC]; XP_015837561.1:c.[537_538insAAC]; XP_015837562.1:c.[363_364insAAC]","XP_008195740.2:p.[Asn853_Lys854insAsn]; XP_008195741.2:p.[Asn851_Lys852insAsn]; XP_015837561.1:p.[Asn180_Lys181insAsn]; XP_015837562.1:p.[Asn122_Lys123insAsn]","LOC659592",659592,null,"659592 [Gene Symbol: LOC659592] [Locus Tag: TcasGA2_TC033738] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: receptor-type tyrosine-protein phosphatase epsilon-like] [Gene Type: protein-coding]","TcasGA2_TC033738; LOC659592"]
[1145,"NC_007422.5",12819855,"SNV","G","C","Homozygous",21,21,100,1,7,14,0.33,36.38,21,21,12,14,null,1,1,"no","C/C","No",1,83.12,"XP_970738.2:c.49C>G","XP_970738.2:p.Pro17Ala","LOC659328",659328,null,"659328 [Gene Symbol: LOC659328] [Locus Tag: TcasGA2_TC009877] [Chromosome: LG7] [Map Location: ] [Description: cytochrome P450 49A1] [Gene Type: protein-coding]","TcasGA2_TC009877; CYP49A1; LOC659328"]
[1147,"NC_007422.5","12970659..12970660","MNV","AT","GG","Homozygous",18,20,90,1,10,11,0.48,36.64,21,23,15,11,null,1,1,"no","GG/GG","No",1,200,"XP_008195715.1:c.[1387_1388delATinsCC]; XP_969198.1:c.[1387_1388delATinsCC]; XP_008195716.1:c.[1387_1388delATinsCC]; XP_008195714.1:c.[1387_1388delATinsCC]","XP_008195715.1:p.[Ile463Pro]; XP_969198.1:p.[Ile463Pro]; XP_008195716.1:p.[Ile463Pro]; XP_008195714.1:p.[Ile463Pro]","LOC657658",657658,null,"657658 [Gene Symbol: LOC657658] [Locus Tag: TcasGA2_TC009861] [Chromosome: LG7] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","TcasGA2_TC009861; LOC657658"]
[1148,"NC_007422.5",12970897,"SNV","C","G","Homozygous",25,25,100,1,9,17,0.35,37.44,26,26,11,12,null,1,1,"no","G/G","No",1,95.14,"XP_969198.1:c.[1150G>C]; XP_008195715.1:c.[1150G>C]; XP_008195714.1:c.[1150G>C]; XP_008195716.1:c.[1150G>C]","XP_969198.1:p.[Ala384Pro]; XP_008195715.1:p.[Ala384Pro]; XP_008195714.1:p.[Ala384Pro]; XP_008195716.1:p.[Ala384Pro]","LOC657658",657658,null,"657658 [Gene Symbol: LOC657658] [Locus Tag: TcasGA2_TC009861] [Chromosome: LG7] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","TcasGA2_TC009861; LOC657658"]
[1149,"NC_007422.5","13119094^13119095","Insertion","-","CTC","Homozygous",20,20,100,1,5,16,0.24,38.05,21,21,12,14,null,1,1,"no","CTC/CTC","No",1,200,"XP_015837398.1:c.[5827_5828insGAG]; XP_015837410.1:c.[4984_4985insGAG]; XP_015837404.1:c.[5800_5801insGAG]; XP_015837401.1:c.[5815_5816insGAG]; XP_015837399.1:c.[5827_5828insGAG]; XP_015837405.1:c.[5794_5795insGAG]; XP_015837394.1:c.[5839_5840insGAG]; XP_015837403.1:c.[5812_5813insGAG]; XP_015837402.1:c.[5812_5813insGAG]; XP_015837408.1:c.[5035_5036insGAG]; XP_015837406.1:c.[5782_5783insGAG]; XP_015837409.1:c.[4993_4994insGAG]; XP_015837393.1:c.[5842_5843insGAG]; XP_015837397.1:c.[5830_5831insGAG]; XP_015837396.1:c.[5833_5834insGAG]; XP_015837395.1:c.[5833_5834insGAG]; XP_015837400.1:c.[5824_5825insGAG]","XP_015837398.1:p.[Glu1942_Asp1943insGly]; XP_015837410.1:p.[Glu1661_Asp1662insGly]; XP_015837404.1:p.[Glu1933_Asp1934insGly]; XP_015837401.1:p.[Glu1938_Asp1939insGly]; XP_015837399.1:p.[Glu1942_Asp1943insGly]; XP_015837405.1:p.[Glu1931_Asp1932insGly]; XP_015837394.1:p.[Glu1946_Asp1947insGly]; XP_015837403.1:p.[Glu1937_Asp1938insGly]; XP_015837402.1:p.[Glu1937_Asp1938insGly]; XP_015837408.1:p.[Glu1678_Asp1679insGly]; XP_015837406.1:p.[Glu1927_Asp1928insGly]; XP_015837409.1:p.[Glu1664_Asp1665insGly]; XP_015837393.1:p.[Glu1947_Asp1948insGly]; XP_015837397.1:p.[Glu1943_Asp1944insGly]; XP_015837396.1:p.[Glu1944_Asp1945insGly]; XP_015837395.1:p.[Glu1944_Asp1945insGly]; XP_015837400.1:p.[Glu1941_Asp1942insGly]","LOC663934",663934,null,"663934 [Gene Symbol: LOC663934] [Locus Tag: TcasGA2_TC010200] [Chromosome: LG7] [Map Location: ] [Description: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2] [Gene Type: protein-coding]","TcasGA2_TC010200; LOC663934"]
[1150,"NC_007422.5",13196951,"SNV","A","G","Heterozygous",10,21,47.62,1,4,9,0.31,37.1,13,24,5,5,-0.67,0.42,1,"no","A/G","No",1,82.48,"XP_008196416.1:c.7235T>C","XP_008196416.1:p.Val2412Ala","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1151,"NC_007422.5",13198557,"SNV","T","C","Homozygous",21,21,100,1,8,15,0.35,37.38,23,23,14,16,null,1,1,"no","C/C","No",1,83.12,"XP_008196416.1:c.6101A>G","XP_008196416.1:p.Asn2034Ser","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1152,"NC_007422.5",13202639,"SNV","C","T","Homozygous",20,20,100,1,15,6,0.29,39.75,21,21,11,13,null,1,1,"no","T/T","No",1,81.69,"XP_008196416.1:c.2408G>A","XP_008196416.1:p.Arg803Gln","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1153,"NC_007422.5",13204059,"SNV","A","G","Homozygous",20,20,100,1,18,3,0.14,38.9,21,21,12,15,null,1,1,"no","G/G","No",1,80.09,"XP_008196416.1:c.1244T>C","XP_008196416.1:p.Val415Ala","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1154,"NC_007422.5",13204068,"SNV","A","G","Homozygous",21,21,100,1,19,4,0.17,38.33,23,23,13,16,null,1,1,"no","G/G","No",1,83.1,"XP_008196416.1:c.1235T>C","XP_008196416.1:p.Val412Ala","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1155,"NC_007422.5",13204071,"SNV","G","A","Homozygous",20,20,100,1,18,4,0.18,37.95,22,22,13,15,null,1,1,"no","A/A","No",1,81.69,"XP_008196416.1:c.1232C>T","XP_008196416.1:p.Pro411Leu","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[1156,"NC_007422.5",13283428,"SNV","G","A","Homozygous",30,30,100,1,19,16,0.46,38.03,35,35,15,16,null,1,1,"no","A/A","No",1,111.77,"XP_974872.2:c.25C>T","XP_974872.2:p.Leu9Phe","LOC663744",663744,null,"663744 [Gene Symbol: LOC663744] [Locus Tag: TcasGA2_TC010191] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663744] [Gene Type: protein-coding]","LOC663744; TcasGA2_TC010191"]
[1158,"NC_007422.5",13638717,"SNV","A","G","Homozygous",19,20,95,1,17,5,0.23,37.37,22,23,9,16,null,1,1,"no","G/G","No",1,51.34,"XP_015837149.1:c.[511A>G]; XP_008196394.1:c.[1399+605A>G]","XP_015837149.1:p.Lys171Glu","LOC663273, LOC107398246","663273 , 107398246",null,"663273 [Gene Symbol: LOC663273] [Locus Tag: TcasGA2_TC008647] [Chromosome: LG7] [Map Location: ] [Description: tyrosine-protein kinase hopscotch] [Gene Type: protein-coding] || 107398246 [Gene Symbol: LOC107398246] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398246] [Gene Type: protein-coding]","hopscotch; Hop; LOC663273; TcasGA2_TC008647 || LOC107398246"]
[1159,"NC_007422.5",13640350,"SNV","G","A","Homozygous",21,21,100,1,17,4,0.19,35.67,21,21,12,19,null,1,1,"no","A/A","No",1,84.7,"XP_015837149.1:c.[2144G>A]; XP_008196394.1:c.[1400-1841G>A]","XP_015837149.1:p.Gly715Asp","LOC663273, LOC107398246","663273 , 107398246",null,"663273 [Gene Symbol: LOC663273] [Locus Tag: TcasGA2_TC008647] [Chromosome: LG7] [Map Location: ] [Description: tyrosine-protein kinase hopscotch] [Gene Type: protein-coding] || 107398246 [Gene Symbol: LOC107398246] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398246] [Gene Type: protein-coding]","hopscotch; Hop; LOC663273; TcasGA2_TC008647 || LOC107398246"]
[1161,"NC_007422.5",13653173,"SNV","T","C","Homozygous",28,28,100,1,14,22,0.39,36.39,36,36,16,15,null,1,1,"no","C/C","No",1,104.19,"XP_974383.1:c.158A>G","XP_974383.1:p.Asn53Ser","LOC663233",663233,null,"663233 [Gene Symbol: LOC663233] [Locus Tag: TcasGA2_TC033846] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase-like] [Gene Type: protein-coding]","LOC663233; TcasGA2_TC033846"]
[1162,"NC_007422.5",13655514,"SNV","G","T","Homozygous",20,20,100,1,6,16,0.27,35,22,22,9,10,null,1,1,"no","T/T","No",1,81.7,"XP_008196389.1:c.905C>A","XP_008196389.1:p.Ala302Glu","LOC663208",663208,null,"663208 [Gene Symbol: LOC663208] [Locus Tag: TcasGA2_TC033847] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase-like] [Gene Type: protein-coding]","TcasGA2_TC033847; LOC663208"]
[1164,"NC_007422.5",13680120,"SNV","G","A","Homozygous",25,25,100,1,13,19,0.41,38.28,32,32,18,19,null,1,1,"no","A/A","No",1,96.73,"XP_015837074.1:c.89C>T","XP_015837074.1:p.Ser30Phe","LOC107398218",107398218,null,"107398218 [Gene Symbol: LOC107398218] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398218] [Gene Type: protein-coding]","LOC107398218"]
[1165,"NC_007422.5",13723316,"SNV","C","G","Homozygous",21,21,100,1,12,13,0.48,35.81,25,25,10,15,null,1,1,"no","G/G","No",1,83.09,"XP_015837075.1:c.4370C>G","XP_015837075.1:p.Thr1457Ser","LOC662737",662737,null,"662737 [Gene Symbol: LOC662737] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC662737] [Gene Type: protein-coding]","LOC662737"]
[1166,"NC_007422.5",13723490,"SNV","T","C","Homozygous",20,20,100,1,13,12,0.48,36.65,25,25,9,15,null,1,1,"no","C/C","No",1,80.11,"XP_015837075.1:c.4544T>C","XP_015837075.1:p.Val1515Ala","LOC662737",662737,null,"662737 [Gene Symbol: LOC662737] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC662737] [Gene Type: protein-coding]","LOC662737"]
[1167,"NC_007422.5","13740834..13740835","MNV","TC","CT","Homozygous",23,23,100,1,14,13,0.48,38.22,27,27,13,18,null,1,1,"no","CT/CT","No",1,200,"XP_015837075.1:c.6446_6447delTCinsCT","XP_015837075.1:p.Ile2149Thr","LOC662737",662737,null,"662737 [Gene Symbol: LOC662737] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC662737] [Gene Type: protein-coding]","LOC662737"]
[1168,"NC_007422.5",13825035,"SNV","T","C","Homozygous",29,29,100,1,27,5,0.16,39.17,32,32,10,22,null,1,1,"no","C/C","No",1,107.2,"XP_015837123.1:c.388A>G","XP_015837123.1:p.Ile130Val","LOC662160, LOC662089","662160 , 662089",null,"662160 [Gene Symbol: LOC662160] [Locus Tag: TcasGA2_TC008670] [Chromosome: LG7] [Map Location: ] [Description: TIMELESS-interacting protein] [Gene Type: protein-coding] || 662089 [Gene Symbol: LOC662089] [Locus Tag: TcasGA2_TC010158] [Chromosome: LG7] [Map Location: ] [Description: facilitated trehalose transporter Tret1-2 homolog] [Gene Type: protein-coding]","LOC662160; TcasGA2_TC008670 || TcasGA2_TC010158; LOC662089"]
[1169,"NC_007422.5",13838226,"SNV","C","T","Homozygous",21,21,100,1,16,7,0.3,38.9,23,23,12,15,null,1,1,"no","T/T","No",1,84.7,"XP_015837125.1:c.8G>A","XP_015837125.1:p.Ser3Asn","LOC662160, LOC662053","662160 , 662053",null,"662160 [Gene Symbol: LOC662160] [Locus Tag: TcasGA2_TC008670] [Chromosome: LG7] [Map Location: ] [Description: TIMELESS-interacting protein] [Gene Type: protein-coding] || 662053 [Gene Symbol: LOC662053] [Locus Tag: TcasGA2_TC010157] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: succinyl-CoA ligase subunit alpha, mitochondrial] [Gene Type: protein-coding]","LOC662160; TcasGA2_TC008670 || LOC662053; TcasGA2_TC010157"]
[1171,"NC_007422.5",13937346,"SNV","T","C","Heterozygous",5,21,23.81,1,0,5,0,41,5,22,3,3,2.27,0.02,0.04,"no","complex","No",1,118.28,"XP_008196342.2:c.[692A>G]; XP_015837439.1:c.[944A>G]","XP_008196342.2:p.[Lys231Arg]; XP_015837439.1:p.[Lys315Arg]","LOC661511",661511,null,"661511 [Gene Symbol: LOC661511] [Locus Tag: TcasGA2_TC010152] [Chromosome: LG7] [Map Location: ] [Description: UDP-glucuronosyltransferase 1-9] [Gene Type: protein-coding]","TcasGA2_TC010152; LOC661511"]
[1172,"NC_007422.5",13937347,"SNV","T","C","Heterozygous",16,21,76.19,1,14,3,0.18,37.56,17,22,13,14,-2.68,0.57,0.54,"no","complex","No",1,200,"XP_015837439.1:c.[943A>G]; XP_008196342.2:c.[691A>G]","XP_015837439.1:p.[Lys315Glu]; XP_008196342.2:p.[Lys231Glu]","LOC661511",661511,null,"661511 [Gene Symbol: LOC661511] [Locus Tag: TcasGA2_TC010152] [Chromosome: LG7] [Map Location: ] [Description: UDP-glucuronosyltransferase 1-9] [Gene Type: protein-coding]","TcasGA2_TC010152; LOC661511"]
[1173,"NC_007422.5",14028147,"SNV","A","T","Homozygous",19,20,95,1,10,10,0.5,36.74,20,21,13,14,null,0.98,1,"no","T/T","No",1,53.11,"XP_015837415.1:c.[6T>A]; XP_972227.1:c.[61-10T>A]","XP_015837415.1:p.Asn2Lys","LOC660940",660940,null,"660940 [Gene Symbol: LOC660940] [Locus Tag: TcasGA2_TC010144] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC660940] [Gene Type: protein-coding]","TcasGA2_TC010144; LOC660940"]
[1174,"NC_007422.5",14032877,"SNV","C","T","Heterozygous",15,24,62.5,1,11,7,0.39,37.73,18,31,12,11,1.76,0.42,0.87,"no","C/T","No",1,61.8,"XP_972129.2:c.727G>A","XP_972129.2:p.Val243Met","LOC660833",660833,null,"660833 [Gene Symbol: LOC660833] [Locus Tag: TcasGA2_TC030761] [Chromosome: LG7] [Map Location: ] [Description: fukutin-related protein] [Gene Type: protein-coding]","LOC660833; TcasGA2_TC030761"]
[1175,"NC_007422.5",14032886,"SNV","A","G","Homozygous",24,24,100,1,13,17,0.43,37.08,30,30,17,19,null,1,1,"no","G/G","No",1,92.12,"XP_972129.2:c.718T>C","XP_972129.2:p.Ser240Pro","LOC660833",660833,null,"660833 [Gene Symbol: LOC660833] [Locus Tag: TcasGA2_TC030761] [Chromosome: LG7] [Map Location: ] [Description: fukutin-related protein] [Gene Type: protein-coding]","LOC660833; TcasGA2_TC030761"]
[1177,"NC_007422.5","15766546^15766547","Insertion","-","GGC","Homozygous",23,24,95.83,1,17,11,0.39,38.43,28,29,12,17,null,1,1,"no","GGC/GGC","No",1,200,"XP_008198217.1:c.[1065_1066insGCC]; XP_008198231.1:c.[1041_1042insGCC]; XP_015837708.1:c.[1065_1066insGCC]; XP_008198239.1:c.[1029_1030insGCC]; XP_015837710.1:c.[1077_1078insGCC]; XP_015837709.1:c.[1050_1051insGCC]","XP_008198217.1:p.[Ala355_Lys356insAla]; XP_008198231.1:p.[Ala347_Lys348insAla]; XP_015837708.1:p.[Ala355_Lys356insAla]; XP_008198239.1:p.[Ala343_Lys344insAla]; XP_015837710.1:p.[Ala359_Lys360insAla]; XP_015837709.1:p.[Ala350_Lys351insAla]","LOC655611",655611,null,"655611 [Gene Symbol: LOC655611] [Locus Tag: TcasGA2_TC010208] [Chromosome: LG7] [Map Location: ] [Description: sodium/potassium/calcium exchanger Nckx30C] [Gene Type: protein-coding]","LOC655611; TcasGA2_TC010208"]
[1178,"NC_007422.5",16168471,"SNV","A","G","Homozygous",23,23,100,1,14,9,0.39,37.57,23,23,14,16,null,1,1,"no","G/G","No",1,89.12,"XP_015837702.1:c.[1090A>G]; XP_015837703.1:c.[1090A>G]; XP_015837704.1:c.[463A>G]","XP_015837702.1:p.[Ile364Val]; XP_015837703.1:p.[Ile364Val]; XP_015837704.1:p.[Ile155Val]","LOC657033",657033,null,"657033 [Gene Symbol: LOC657033] [Locus Tag: TcasGA2_TC010221] [Chromosome: LG7] [Map Location: ] [Description: GPI ethanolamine phosphate transferase 2] [Gene Type: protein-coding]","TcasGA2_TC010221; LOC657033"]
[1179,"NC_007422.5",16443821,"SNV","T","C","Heterozygous",16,25,64,1,16,7,0.3,38.62,23,35,10,11,2.72,0.93,0.98,"no","C/T","No",1,57.8,"XP_015837700.1:c.586T>C","XP_015837700.1:p.Phe196Leu","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1180,"NC_007422.5",16443840,"SNV","A","G","Heterozygous",18,31,58.06,1,16,9,0.36,38.61,25,41,10,13,0.2,0.76,0.99,"no","A/G","No",1,92.02,"XP_015837700.1:c.605A>G","XP_015837700.1:p.Lys202Arg","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1182,"NC_007422.5",16443875,"SNV","A","G","Heterozygous",12,28,42.86,1,9,9,0.5,37.42,18,39,8,9,-0.93,0.97,0.95,"no","A/G","No",1,88.84,"XP_015837700.1:c.640A>G","XP_015837700.1:p.Ser214Gly","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1185,"NC_007422.5",16443922,"SNV","A","C","Heterozygous",17,27,62.96,1,5,16,0.24,39.24,21,35,12,12,-0.03,0.18,0.99,"no","A/C","No",1,61.39,"XP_015837700.1:c.687A>C","XP_015837700.1:p.Glu229Asp","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1186,"NC_007422.5","16443940..16443941","MNV","CT","AC","Heterozygous",7,20,35,1,2,5,0.29,36.36,7,24,4,5,-0.21,0.25,1,"yes","complex","No",1,200,"XP_015837700.1:c.705_706delCTinsAC","XP_015837700.1:p.Asn235_Phe236delinsLysLeu","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1187,"NC_007422.5",16443941,"SNV","T","C","Heterozygous",6,20,30,1,0,6,0,37.83,6,24,4,5,0.62,0.19,0.41,"yes","complex","No",1,200,"XP_015837700.1:c.706T>C","XP_015837700.1:p.Phe236Leu","LOC107398361",107398361,null,"107398361 [Gene Symbol: LOC107398361] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550] [Gene Type: protein-coding]","LOC107398361"]
[1188,"NC_007422.5",16448174,"SNV","A","C","Heterozygous",9,28,32.14,1,6,3,0.33,36.78,9,31,5,6,0.74,0.54,0.99,"no","A/C","No",1,50.26,"XP_015837727.1:c.296A>C","XP_015837727.1:p.Lys99Thr","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1189,"NC_007422.5","16448187..16448188","MNV","GG","CA","Heterozygous",6,22,27.27,1,3,3,0.5,36.67,6,27,4,4,0.79,0.85,1,"no","complex","No",1,200,"XP_015837727.1:c.309_310delGGinsCA","XP_015837727.1:p.Lys103_Asp104delinsAsnAsn","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1192,"NC_007422.5",16448312,"SNV","A","G","Heterozygous",11,28,39.29,1,11,1,0.08,38.73,12,29,5,8,0.68,0.05,0.1,"no","A/G","No",1,76.05,"XP_015837727.1:c.434A>G","XP_015837727.1:p.Tyr145Cys","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1193,"NC_007422.5",16448330,"SNV","A","G","Heterozygous",15,28,53.57,1,14,1,0.07,39.47,15,28,6,11,1.75,0.05,0.09,"no","A/G","No",1,100.39,"XP_015837727.1:c.452A>G","XP_015837727.1:p.Asn151Ser","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1194,"NC_007422.5",16448335,"SNV","A","G","Heterozygous",16,28,57.14,1,15,1,0.06,39.12,16,28,7,12,1.46,0.1,0.08,"no","A/G","No",1,87.72,"XP_015837727.1:c.457A>G","XP_015837727.1:p.Asn153Asp","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1195,"NC_007422.5",16448451,"SNV","C","A","Heterozygous",17,35,48.57,1,4,15,0.21,38.47,19,40,8,10,0.12,0.26,0.15,"no","A/C","No",1,128.35,"XP_015837727.1:c.573C>A","XP_015837727.1:p.Asn191Lys","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1196,"NC_007422.5",16448467,"SNV","T","G","Heterozygous",11,25,44,1,3,9,0.25,38,12,29,8,8,2.76,0.25,0.34,"no","G/T","No",1,84.01,"XP_015837727.1:c.589T>G","XP_015837727.1:p.Ser197Ala","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[1198,"NC_007423.3",168763,"SNV","G","C","Homozygous",21,21,100,1,14,7,0.33,38.1,21,21,11,12,null,1,1,"no","C/C","No",1,83.12,"XP_966433.1:c.256C>G","XP_966433.1:p.Arg86Gly","LOC655245",655245,null,"655245 [Gene Symbol: LOC655245] [Locus Tag: TcasGA2_TC015978] [Chromosome: LG8] [Map Location: ] [Description: aldehyde dehydrogenase, dimeric NADP-preferring] [Gene Type: protein-coding]","LOC655245; TcasGA2_TC015978"]
[1200,"NC_007423.3",361878,"SNV","C","T","Heterozygous",12,20,60,1,5,9,0.36,38.92,14,22,8,8,-0.77,0.68,1,"no","C/T","No",1,60.21,"XP_015837849.1:c.919C>T","XP_015837849.1:p.Gln307*","LOC100141755, LOC107398407","100141755 , 107398407",null,"100141755 [Gene Symbol: LOC100141755] [Locus Tag: TcasGA2_TC006953] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141755] [Gene Type: protein-coding] || 107398407 [Gene Symbol: LOC107398407] [Locus Tag: TcasGA2_TC006954] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398407] [Gene Type: protein-coding]","TcasGA2_TC006953; LOC100141755 || TcasGA2_TC006954; LOC107398407"]
[1201,"NC_007423.3",361989,"Deletion","T","-","Heterozygous",14,28,50,1,10,4,0.29,38.86,14,28,9,7,-0.02,0.39,0.92,"no","-/T","Yes",9,110.14,"XP_015837849.1:c.1030delT","XP_015837849.1:p.Phe346fs","LOC100141755, LOC107398407","100141755 , 107398407",null,"100141755 [Gene Symbol: LOC100141755] [Locus Tag: TcasGA2_TC006953] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141755] [Gene Type: protein-coding] || 107398407 [Gene Symbol: LOC107398407] [Locus Tag: TcasGA2_TC006954] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398407] [Gene Type: protein-coding]","TcasGA2_TC006953; LOC100141755 || TcasGA2_TC006954; LOC107398407"]
[1202,"NC_007423.3",362005,"SNV","A","G","Heterozygous",15,28,53.57,1,10,9,0.47,37.33,19,32,9,8,0.02,0.85,1,"no","A/G","No",1,100.3,"XP_015837849.1:c.1046A>G","XP_015837849.1:p.Tyr349Cys","LOC100141755, LOC107398407","100141755 , 107398407",null,"100141755 [Gene Symbol: LOC100141755] [Locus Tag: TcasGA2_TC006953] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141755] [Gene Type: protein-coding] || 107398407 [Gene Symbol: LOC107398407] [Locus Tag: TcasGA2_TC006954] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398407] [Gene Type: protein-coding]","TcasGA2_TC006953; LOC100141755 || TcasGA2_TC006954; LOC107398407"]
[1203,"NC_007423.3",801436,"SNV","G","A","Heterozygous",9,21,42.86,1,5,8,0.38,39.78,13,30,3,4,2.17,0.36,0.97,"no","A/G","No",1,68.98,"XP_008199215.1:c.377G>A","XP_008199215.1:p.Gly126Glu","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1204,"NC_007423.3","802172^802173","Insertion","-","ATTGCC","Homozygous",26,26,100,1,20,10,0.33,39.49,30,30,16,23,null,1,1,"no","ATTGCC/ATTGCC","No",1,200,"XP_008199215.1:c.984_985insATTGCC","XP_008199215.1:p.Tyr328_Met329insIleAla","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1205,"NC_007423.3",802257,"SNV","G","A","Heterozygous",15,35,42.86,1,7,14,0.33,38.8,21,44,10,11,0.35,0.72,0.96,"no","A/G","No",1,106.24,"XP_008199215.1:c.1069G>A","XP_008199215.1:p.Glu357Lys","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1206,"NC_007423.3",802276,"SNV","T","A","Heterozygous",23,39,58.97,1,12,12,0.5,38.09,24,42,10,11,-2.07,0.94,0.75,"no","A/T","No",1,108.2,"XP_008199215.1:c.1088T>A","XP_008199215.1:p.Phe363Tyr","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1210,"NC_007423.3",1880924,"SNV","T","A","Heterozygous",12,24,50,1,9,7,0.44,38.75,16,30,10,10,0.35,0.49,0.87,"no","A/T","No",1,95.87,"XP_015837928.1:c.589A>T","XP_015837928.1:p.Thr197Ser","LOC103314769",103314769,null,"103314769 [Gene Symbol: LOC103314769] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: actin-binding protein anillin] [Gene Type: protein-coding]","LOC103314769"]
[1211,"NC_007423.3",1895181,"SNV","G","A","Heterozygous",20,32,62.5,1,11,9,0.45,37.5,20,32,12,13,-1.27,0.93,1,"no","A/G","No",1,77.69,"XP_008199816.1:c.1219C>T","XP_008199816.1:p.Leu407Phe","LOC103314762",103314762,null,"103314762 [Gene Symbol: LOC103314762] [Locus Tag: TcasGA2_TC033499] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314762; TcasGA2_TC033499"]
[1212,"NC_007423.3",1895391,"SNV","C","T","Heterozygous",14,44,31.82,1,13,3,0.19,38.71,16,48,10,10,-0.94,0.75,0.56,"no","C/T","No",1,68.31,"XP_008199816.1:c.1009G>A","XP_008199816.1:p.Val337Ile","LOC103314762",103314762,null,"103314762 [Gene Symbol: LOC103314762] [Locus Tag: TcasGA2_TC033499] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314762; TcasGA2_TC033499"]
[1213,"NC_007423.3",1895691,"SNV","C","T","Heterozygous",14,33,42.42,1,6,10,0.38,37.5,16,41,11,12,0.93,0.56,0.95,"no","C/T","No",1,99.01,"XP_008199816.1:c.761G>A","XP_008199816.1:p.Arg254Gln","LOC103314762",103314762,null,"103314762 [Gene Symbol: LOC103314762] [Locus Tag: TcasGA2_TC033499] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314762; TcasGA2_TC033499"]
[1214,"NC_007423.3",1895707,"SNV","C","T","Heterozygous",12,30,40,1,7,10,0.41,37.83,17,38,8,8,-2.03,0.37,1,"no","C/T","No",1,81.98,"XP_008199816.1:c.745G>A","XP_008199816.1:p.Val249Ile","LOC103314762",103314762,null,"103314762 [Gene Symbol: LOC103314762] [Locus Tag: TcasGA2_TC033499] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314762; TcasGA2_TC033499"]
[1215,"NC_007423.3",2044196,"SNV","G","A","Heterozygous",10,24,41.67,1,5,8,0.38,35.1,13,27,4,5,-2.9,0.25,0.99,"no","A/G","No",1,53.64,"XP_015837750.1:c.589G>A","XP_015837750.1:p.Ala197Thr","LOC107398389",107398389,null,"107398389 [Gene Symbol: LOC107398389] [Locus Tag: TcasGA2_TC006079] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398389] [Gene Type: protein-coding]","LOC107398389; TcasGA2_TC006079"]
[1216,"NC_007423.3",2044221,"SNV","A","C","Heterozygous",13,23,56.52,1,5,12,0.29,38,17,28,4,5,1.05,0.38,0.72,"no","A/C","No",1,72.55,"XP_015837750.1:c.614A>C","XP_015837750.1:p.Glu205Ala","LOC107398389",107398389,null,"107398389 [Gene Symbol: LOC107398389] [Locus Tag: TcasGA2_TC006079] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398389] [Gene Type: protein-coding]","LOC107398389; TcasGA2_TC006079"]
[1217,"NC_007423.3",2044251,"SNV","A","G","Homozygous",23,23,100,1,8,16,0.33,38.43,24,24,10,11,null,1,1,"no","G/G","No",1,89.12,"XP_015837750.1:c.644A>G","XP_015837750.1:p.Lys215Arg","LOC107398389",107398389,null,"107398389 [Gene Symbol: LOC107398389] [Locus Tag: TcasGA2_TC006079] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398389] [Gene Type: protein-coding]","LOC107398389; TcasGA2_TC006079"]
[1218,"NC_007423.3",2392385,"SNV","C","T","Heterozygous",17,26,65.38,1,9,11,0.45,36.76,20,29,7,10,-1.29,0.91,0.99,"no","C/T","No",1,56.25,"XP_967599.1:c.1064G>A","XP_967599.1:p.Arg355Lys","LOC655951",655951,null,"655951 [Gene Symbol: LOC655951] [Locus Tag: TcasGA2_TC006057] [Chromosome: LG8] [Map Location: ] [Description: 4-coumarate--CoA ligase 1] [Gene Type: protein-coding]","TcasGA2_TC006057; LOC655951"]
[1219,"NC_007423.3",2392412,"SNV","T","G","Heterozygous",18,28,64.29,1,8,14,0.36,35.61,22,32,7,10,-0.43,0.67,0.98,"no","G/T","No",1,58.85,"XP_967599.1:c.1037A>C","XP_967599.1:p.Asn346Thr","LOC655951",655951,null,"655951 [Gene Symbol: LOC655951] [Locus Tag: TcasGA2_TC006057] [Chromosome: LG8] [Map Location: ] [Description: 4-coumarate--CoA ligase 1] [Gene Type: protein-coding]","TcasGA2_TC006057; LOC655951"]
[1220,"NC_007423.3",2393339,"SNV","C","A","Heterozygous",9,20,45,1,2,7,0.22,37.78,9,22,6,6,1.63,0.75,0.94,"no","A/C","No",1,68.14,"XP_967599.1:c.208G>T","XP_967599.1:p.Ala70Ser","LOC655951",655951,null,"655951 [Gene Symbol: LOC655951] [Locus Tag: TcasGA2_TC006057] [Chromosome: LG8] [Map Location: ] [Description: 4-coumarate--CoA ligase 1] [Gene Type: protein-coding]","TcasGA2_TC006057; LOC655951"]
[1221,"NC_007423.3",2418799,"SNV","G","C","Heterozygous",11,20,55,1,9,3,0.25,35.55,12,22,5,6,-2.17,0.33,0.8,"no","C/G","No",1,71.71,"XP_967996.1:c.519C>G","XP_967996.1:p.Ile173Met","LOC656365",656365,null,"656365 [Gene Symbol: LOC656365] [Locus Tag: TcasGA2_TC006053] [Chromosome: LG8] [Map Location: ] [Description: ceramide synthase 6] [Gene Type: protein-coding]","TcasGA2_TC006053; LOC656365"]
[1222,"NC_007423.3",2438992,"SNV","T","C","Homozygous",20,20,100,1,2,19,0.1,39.25,21,21,11,11,null,1,1,"no","C/C","No",1,80.12,"NP_001161929.1:c.[1951T>C]; XP_008196103.1:c.[1103+4602A>G]; XP_008196102.1:c.[1103+4602A>G]; XP_015837773.1:c.[1196+4602A>G]","NP_001161929.1:p.Ser651Pro","LOC656615, Pmp14","656615 , 100313959","peritrophic matrix protein 14","656615 [Gene Symbol: LOC656615] [Locus Tag: TcasGA2_TC006051] [Chromosome: LG8] [Map Location: ] [Description: GTPase-activating protein CdGAPr] [Gene Type: protein-coding] || 100313959 [Gene Symbol: Pmp14] [Locus Tag: TcasGA2_TC033952] [Chromosome: LG8] [Map Location: ] [Description: peritrophic matrix protein 14] [Gene Type: protein-coding]","TcasGA2_TC006051; LOC656615 || Pmp14; TcasGA2_TC033952"]
[1224,"NC_007423.3",2454276,"SNV","T","G","Homozygous",25,25,100,1,14,12,0.46,35.8,26,26,12,16,null,1,1,"no","G/G","No",1,95.14,"XP_968377.1:c.[331T>G]; XP_015837776.1:c.[301T>G]","XP_968377.1:p.[Ser111Ala]; XP_015837776.1:p.[Ser101Ala]","LOC656777",656777,null,"656777 [Gene Symbol: LOC656777] [Locus Tag: TcasGA2_TC006099] [Chromosome: LG8] [Map Location: ] [Description: D-arabinitol dehydrogenase 1] [Gene Type: protein-coding]","TcasGA2_TC006099; LOC656777"]
[1225,"NC_007423.3",2454351,"SNV","T","A","Heterozygous",12,23,52.17,1,8,4,0.33,37.92,12,25,6,10,0.95,0.49,0.46,"no","A/T","No",1,88.79,"XP_015837776.1:c.[376T>A]; XP_968377.1:c.[406T>A]","XP_015837776.1:p.[Ser126Thr]; XP_968377.1:p.[Ser136Thr]","LOC656777",656777,null,"656777 [Gene Symbol: LOC656777] [Locus Tag: TcasGA2_TC006099] [Chromosome: LG8] [Map Location: ] [Description: D-arabinitol dehydrogenase 1] [Gene Type: protein-coding]","TcasGA2_TC006099; LOC656777"]
[1226,"NC_007423.3",2503044,"SNV","C","G","Homozygous",21,21,100,1,4,17,0.19,37.71,21,21,12,14,null,1,1,"no","G/G","No",1,83.1,"XP_008196114.1:c.[1503G>C]; XP_008196113.1:c.[1512G>C]","XP_008196114.1:p.[Glu501Asp]; XP_008196113.1:p.[Glu504Asp]","LOC107398401, LOC657818","107398401 , 657818",null,"107398401 [Gene Symbol: LOC107398401] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized protein C3orf18-like] [Gene Type: protein-coding] || 657818 [Gene Symbol: LOC657818] [Locus Tag: TcasGA2_TC006044] [Chromosome: LG8] [Map Location: ] [Description: flap endonuclease GEN] [Gene Type: protein-coding]","LOC107398401 || LOC657818; TcasGA2_TC006044"]
[1227,"NC_007423.3",2533347,"SNV","A","T","Homozygous",21,21,100,1,7,15,0.32,37.52,22,22,9,13,null,1,1,"no","T/T","No",1,84.71,"XP_008196116.1:c.3022T>A","XP_008196116.1:p.Phe1008Ile","LOC658295",658295,null,"658295 [Gene Symbol: LOC658295] [Locus Tag: TcasGA2_TC006042] [Chromosome: LG8] [Map Location: ] [Description: histone-lysine N-methyltransferase eggless] [Gene Type: protein-coding]","LOC658295; TcasGA2_TC006042"]
[1228,"NC_007423.3",2566613,"SNV","T","C","Homozygous",21,21,100,1,10,12,0.45,37.52,22,22,13,14,null,1,1,"no","C/C","No",1,83.13,"XP_008196078.1:c.1164A>G","XP_008196078.1:p.Ile388Met","LOC658742",658742,null,"658742 [Gene Symbol: LOC658742] [Locus Tag: TcasGA2_TC006039] [Chromosome: LG8] [Map Location: ] [Description: N-acetylglucosamine-1-phosphotransferase subunits alpha/beta] [Gene Type: protein-coding]","TcasGA2_TC006039; LOC658742"]
[1229,"NC_007423.3",2569659,"SNV","T","G","Homozygous",23,23,100,1,19,4,0.17,39.87,23,23,9,17,null,1,1,"no","G/G","No",1,89.12,"XP_008196119.1:c.1565A>C","XP_008196119.1:p.Asn522Thr","LOC658811",658811,null,"658811 [Gene Symbol: LOC658811] [Locus Tag: TcasGA2_TC006038] [Chromosome: LG8] [Map Location: ] [Description: probable ATP-dependent RNA helicase DDX55 homolog] [Gene Type: protein-coding]","LOC658811; TcasGA2_TC006038"]
[1232,"NC_007423.3",2622094,"SNV","G","T","Heterozygous",9,21,42.86,1,6,4,0.4,37.33,10,27,5,5,-0.75,0.86,1,"no","G/T","No",1,65.55,"XP_008196139.1:c.[1370C>A]; XP_015837857.1:c.[1382C>A]; XP_008196136.1:c.[1382C>A]; XP_008196137.1:c.[1382C>A]; XP_008196138.1:c.[1382C>A]","XP_008196139.1:p.[Ser457*]; XP_015837857.1:p.[Ser461*]; XP_008196136.1:p.[Ser461*]; XP_008196137.1:p.[Ser461*]; XP_008196138.1:p.[Ser461*]","LOC659402",659402,null,"659402 [Gene Symbol: LOC659402] [Locus Tag: TcasGA2_TC006034] [Chromosome: LG8] [Map Location: ] [Description: chymotrypsin-C] [Gene Type: protein-coding]","LOC659402; TcasGA2_TC006034"]
[1233,"NC_007423.3",2625794,"SNV","G","A","Heterozygous",13,31,41.94,1,0,13,0,39.54,13,36,8,7,-0.04,0.23,0.26,"no","A/G","No",1,92.03,"XP_015837857.1:c.[649C>T]; XP_008196136.1:c.[649C>T]; XP_008196138.1:c.[649C>T]; XP_008196139.1:c.[649C>T]; XP_008196137.1:c.[649C>T]","XP_015837857.1:p.[Pro217Ser]; XP_008196136.1:p.[Pro217Ser]; XP_008196138.1:p.[Pro217Ser]; XP_008196139.1:p.[Pro217Ser]; XP_008196137.1:p.[Pro217Ser]","LOC659402",659402,null,"659402 [Gene Symbol: LOC659402] [Locus Tag: TcasGA2_TC006034] [Chromosome: LG8] [Map Location: ] [Description: chymotrypsin-C] [Gene Type: protein-coding]","LOC659402; TcasGA2_TC006034"]
[1236,"NC_007423.3",2876460,"SNV","T","G","Homozygous",20,20,100,1,10,15,0.4,36.3,25,25,9,11,null,1,1,"no","G/G","No",1,80.08,"XP_008196161.1:c.3304A>C","XP_008196161.1:p.Asn1102His","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1237,"NC_007423.3",2876463,"SNV","T","G","Homozygous",21,21,100,1,11,15,0.42,37.33,26,26,10,12,null,1,1,"no","G/G","No",1,83.1,"XP_008196161.1:c.3301A>C","XP_008196161.1:p.Asn1101His","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1238,"NC_007423.3",2893197,"SNV","C","T","Heterozygous",11,27,40.74,1,7,4,0.36,36.09,11,30,6,7,0.64,0.6,0.56,"no","C/T","No",1,77.75,"XP_008196161.1:c.1174G>A","XP_008196161.1:p.Glu392Lys","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1239,"NC_007423.3",2919718,"SNV","C","G","Heterozygous",9,23,39.13,1,0,9,0,36,9,26,5,5,-1.48,0.21,0.14,"no","C/G","No",1,63.38,"XP_001813387.1:c.905G>C","XP_001813387.1:p.Gly302Ala","LOC100141949",100141949,null,"100141949 [Gene Symbol: LOC100141949] [Locus Tag: TcasGA2_TC006020] [Chromosome: LG8] [Map Location: ] [Description: Meckel syndrome type 1 protein] [Gene Type: protein-coding]","LOC100141949; TcasGA2_TC006020"]
[1240,"NC_007423.3",2922040,"SNV","T","C","Homozygous",22,23,95.65,1,19,3,0.14,38.27,22,23,12,13,null,1,1,"no","C/C","No",1,61.55,"XP_972541.1:c.956T>C","XP_972541.1:p.Val319Ala","LOC661276",661276,null,"661276 [Gene Symbol: LOC661276] [Locus Tag: TcasGA2_TC006133] [Chromosome: LG8] [Map Location: ] [Description: rhomboid-related protein 2] [Gene Type: protein-coding]","LOC661276; TcasGA2_TC006133"]
[1241,"NC_007423.3",3434913,"SNV","T","C","Homozygous",21,21,100,1,11,10,0.48,37.29,21,21,12,16,null,1,1,"no","C/C","No",1,83.13,"XP_015837925.1:c.[349T>C]; XP_008196167.1:c.[343T>C]","XP_015837925.1:p.[Ser117Pro]; XP_008196167.1:p.[Ser115Pro]","LOC661691",661691,null,"661691 [Gene Symbol: LOC661691] [Locus Tag: TcasGA2_TC006139] [Chromosome: LG8] [Map Location: ] [Description: multiple inositol polyphosphate phosphatase 1] [Gene Type: protein-coding]","LOC661691; TcasGA2_TC006139"]
[1246,"NC_007423.3",3810813,"SNV","A","T","Homozygous",21,21,100,1,9,13,0.41,37.76,22,22,16,16,null,1,1,"no","T/T","No",1,84.7,"XP_973079.1:c.1374A>T","XP_973079.1:p.Lys458Asn","LOC661854",661854,null,"661854 [Gene Symbol: LOC661854] [Locus Tag: TcasGA2_TC006147] [Chromosome: LG8] [Map Location: ] [Description: U3 small nucleolar RNA-associated protein 14 homolog A] [Gene Type: protein-coding]","LOC661854; TcasGA2_TC006147"]
[1247,"NC_007423.3",3835190,"SNV","A","C","Homozygous",25,25,100,1,12,16,0.43,38.4,28,28,14,15,null,1,1,"no","C/C","No",1,95.16,"XP_973164.1:c.607T>G","XP_973164.1:p.Ser203Ala","LOC661941",661941,null,"661941 [Gene Symbol: LOC661941] [Locus Tag: TcasGA2_TC005997] [Chromosome: LG8] [Map Location: ] [Description: tektin-4] [Gene Type: protein-coding]","LOC661941; TcasGA2_TC005997"]
[1248,"NC_007423.3",4018734,"SNV","C","T","Homozygous",21,21,100,1,11,14,0.44,37.76,25,25,14,15,null,1,1,"no","T/T","No",1,84.71,"XP_008196185.1:c.[49+6878G>A]; XP_973510.1:c.[623C>T]","XP_973510.1:p.Thr208Ile","LOC662235, LOC662311","662235 , 662311",null,"662235 [Gene Symbol: LOC662235] [Locus Tag: TcasGA2_TC005994] [Chromosome: LG8] [Map Location: ] [Description: Ig-like and fibronectin type-III domain-containing protein 1] [Gene Type: protein-coding] || 662311 [Gene Symbol: LOC662311] [Locus Tag: TcasGA2_TC006158] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC662311] [Gene Type: protein-coding]","TcasGA2_TC005994; LOC662235 || LOC662311; TcasGA2_TC006158"]
[1249,"NC_007423.3",4170925,"SNV","A","T","Homozygous",20,20,100,1,14,9,0.39,37.5,23,23,12,12,null,1,1,"no","T/T","No",1,81.7,"XP_015837815.1:c.[682T>A]; XP_973796.1:c.[841T>A]","XP_015837815.1:p.[Trp228Arg]; XP_973796.1:p.[Trp281Arg]","LOC662617",662617,null,"662617 [Gene Symbol: LOC662617] [Locus Tag: TcasGA2_TC005987] [Chromosome: LG8] [Map Location: ] [Description: putative RNA-binding protein Luc7-like 2] [Gene Type: protein-coding]","LOC662617; TcasGA2_TC005987"]
[1250,"NC_007423.3",4262591,"SNV","G","T","Homozygous",20,20,100,1,13,7,0.35,37.5,20,20,11,9,null,1,1,"no","T/T","No",1,81.69,"XP_008196203.1:c.[1232C>A]; XP_008196204.1:c.[1220C>A]","XP_008196203.1:p.[Ala411Asp]; XP_008196204.1:p.[Ala407Asp]","LOC103313798",103313798,null,"103313798 [Gene Symbol: LOC103313798] [Locus Tag: TcasGA2_TC005978] [Chromosome: LG8] [Map Location: ] [Description: ankyrin-3] [Gene Type: protein-coding]","LOC103313798; TcasGA2_TC005978"]
[1251,"NC_007423.3",4592942,"SNV","T","C","Homozygous",20,20,100,1,14,8,0.36,36.5,22,22,15,14,null,1,1,"no","C/C","No",1,80.11,"XP_966477.1:c.221T>C","XP_966477.1:p.Phe74Ser","LOC654943",654943,null,"654943 [Gene Symbol: LOC654943] [Locus Tag: TcasGA2_TC006182] [Chromosome: LG8] [Map Location: ] [Description: protein msta, isoform B] [Gene Type: protein-coding]","LOC654943; TcasGA2_TC006182"]
[1252,"NC_007423.3","4606920^4606921","Insertion","-","TTT","Homozygous",23,23,100,1,8,18,0.31,36.43,26,26,15,15,null,1,1,"no","TTT/TTT","No",1,200,"XP_008201675.1:c.489_490insAAA","XP_008201675.1:p.Lys163_Ser164insLys","LOC100142315",100142315,null,"100142315 [Gene Symbol: LOC100142315] [Locus Tag: TcasGA2_TC005967] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC100142315; TcasGA2_TC005967"]
[1253,"NC_007423.3",4755777,"SNV","G","A","Homozygous",21,21,100,1,14,8,0.36,36.14,22,22,12,17,null,1,1,"no","A/A","No",1,84.7,"XP_967600.2:c.1211G>A","XP_967600.2:p.Gly404Asp","LOC655952",655952,null,"655952 [Gene Symbol: LOC655952] [Locus Tag: TcasGA2_TC006188] [Chromosome: LG8] [Map Location: ] [Description: DNA-directed RNA polymerase, mitochondrial] [Gene Type: protein-coding]","LOC655952; TcasGA2_TC006188"]
[1254,"NC_007423.3","4873553..4873555","Deletion","TTT","-","Homozygous",23,23,100,1,14,14,0.5,36.91,28,28,17,18,null,1,1,"no","-/-","No",1,200,"XP_008196467.1:c.206_208delAAA","XP_008196467.1:p.Lys69del","LOC657429, LOC656957","657429 , 656957",null,"657429 [Gene Symbol: LOC657429] [Locus Tag: TcasGA2_TC006200] [Chromosome: LG8] [Map Location: ] [Description: brefeldin A-inhibited guanine nucleotide-exchange protein 3] [Gene Type: protein-coding] || 656957 [Gene Symbol: LOC656957] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: cathepsin B-like cysteine proteinase 4] [Gene Type: protein-coding]","TcasGA2_TC006200; LOC657429 || LOC656957"]
[1256,"NC_007423.3",5474747,"SNV","A","G","Homozygous",22,22,100,1,10,18,0.36,35.64,28,28,9,11,null,1,1,"no","G/G","No",1,86.11,"XP_972136.1:c.452T>C","XP_972136.1:p.Val151Ala","LOC660840",660840,null,"660840 [Gene Symbol: LOC660840] [Locus Tag: TcasGA2_TC005925] [Chromosome: LG8] [Map Location: ] [Description: serine protease H65] [Gene Type: protein-coding]","LOC660840; H65; TcasGA2_TC005925"]
[1257,"NC_007423.3",5740018,"SNV","T","C","Homozygous",22,22,100,1,10,17,0.37,37.23,27,27,12,16,null,1,1,"no","C/C","No",1,86.13,"XP_015837865.1:c.[1164T>C]; XP_008196576.2:c.[981T>C]; XP_015837866.1:c.[1114T>C]","XP_015837866.1:p.[Phe372Leu]","LOC103313893",103313893,null,"103313893 [Gene Symbol: LOC103313893] [Locus Tag: TcasGA2_TC006244] [Chromosome: LG8] [Map Location: ] [Description: TWiK family of potassium channels protein 7] [Gene Type: protein-coding]","LOC103313893; TcasGA2_TC006244"]
[1258,"NC_007423.3",5776684,"SNV","C","T","Homozygous",21,21,100,1,8,18,0.31,35.9,26,26,13,14,null,1,1,"no","T/T","No",1,81.7,"XP_008196580.1:c.619G>A","XP_008196580.1:p.Glu207Lys","LOC662132",662132,null,"662132 [Gene Symbol: LOC662132] [Locus Tag: TcasGA2_TC005906] [Chromosome: LG8] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC662132; TcasGA2_TC005906"]
[1259,"NC_007423.3",5779604,"SNV","C","A","Homozygous",20,20,100,1,15,5,0.25,38.55,20,20,10,13,null,1,1,"no","A/A","No",1,81.69,"XP_015837880.1:c.[141C>A]; XP_008196536.1:c.[141C>A]","XP_015837880.1:p.[His47Gln]; XP_008196536.1:p.[His47Gln]","LOC662272",662272,null,"662272 [Gene Symbol: LOC662272] [Locus Tag: TcasGA2_TC006248] [Chromosome: LG8] [Map Location: ] [Description: centrosomal protein of 162 kDa] [Gene Type: protein-coding]","TcasGA2_TC006248; LOC662272"]
[1260,"NC_007423.3",5882063,"SNV","G","A","Homozygous",20,20,100,1,9,11,0.45,38.85,20,20,16,14,null,1,1,"no","A/A","No",1,81.69,"XP_008196554.1:c.[1352C>T]; XP_008196552.1:c.[1352C>T]; XP_015837920.1:c.[1352C>T]; XP_008196555.1:c.[1352C>T]","XP_008196554.1:p.[Thr451Ile]; XP_008196552.1:p.[Thr451Ile]; XP_015837920.1:p.[Thr451Ile]; XP_008196555.1:p.[Thr451Ile]","LOC662744",662744,null,"662744 [Gene Symbol: LOC662744] [Locus Tag: TcasGA2_TC005897] [Chromosome: LG8] [Map Location: ] [Description: transmembrane channel-like protein 3] [Gene Type: protein-coding]","LOC662744; TcasGA2_TC005897"]
[1261,"NC_007423.3",6024548,"SNV","A","C","Homozygous",21,21,100,1,10,13,0.43,37.29,23,23,14,17,null,1,1,"no","C/C","No",1,83.12,"XP_968075.2:c.566T>G","XP_968075.2:p.Ile189Ser","LOC656451",656451,null,"656451 [Gene Symbol: LOC656451] [Locus Tag: TcasGA2_TC005884] [Chromosome: LG8] [Map Location: ] [Description: heat shock 70 kDa protein II] [Gene Type: protein-coding]","LOC656451; TcasGA2_TC005884"]
[1262,"NC_007423.3",6034610,"SNV","A","G","Homozygous",21,21,100,1,13,9,0.41,37.29,22,22,11,16,null,1,1,"no","G/G","No",1,83.1,"XP_008196586.1:c.584A>G","XP_008196586.1:p.His195Arg","LOC103313898",103313898,null,"103313898 [Gene Symbol: LOC103313898] [Locus Tag: TcasGA2_TC006269] [Chromosome: LG8] [Map Location: ] [Description: elastase-1] [Gene Type: protein-coding]","LOC103313898; H73; TcasGA2_TC006269"]
[1263,"NC_007423.3",6644769,"SNV","G","A","Homozygous",20,20,100,1,8,13,0.38,37.9,21,21,13,14,null,1,1,"no","A/A","No",1,81.69,"XP_008196688.2:c.668G>A","XP_008196688.2:p.Ser223Asn","LOC660947",660947,null,"660947 [Gene Symbol: LOC660947] [Locus Tag: TcasGA2_TC006293] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: UPF0764 protein C16orf89 homolog] [Gene Type: protein-coding]","TcasGA2_TC006293; LOC660947"]
[1264,"NC_007423.3",6990620,"SNV","T","G","Homozygous",21,21,100,1,12,9,0.43,38.24,21,21,10,15,null,1,1,"no","G/G","No",1,83.1,"XP_015838019.1:c.[1812T>G]; XP_015838021.1:c.[1806T>G]; XP_008196691.1:c.[1812T>G]; XP_015838020.1:c.[1812T>G]","XP_015838019.1:p.[Asp604Glu]; XP_015838021.1:p.[Asp602Glu]; XP_008196691.1:p.[Asp604Glu]; XP_015838020.1:p.[Asp604Glu]","LOC661809",661809,null,"661809 [Gene Symbol: LOC661809] [Locus Tag: TcasGA2_TC034037] [Chromosome: LG8] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","LOC661809; TcasGA2_TC034037"]
[1265,"NC_007423.3",7000881,"SNV","C","T","Heterozygous",27,103,26.21,1,17,12,0.41,39.19,29,114,18,23,-0.12,0.59,0.6,"no","C/T","No",1,72.01,"XP_008194622.1:c.[2069G>A]; XP_008194621.1:c.[2294G>A]","XP_008194622.1:p.[Ser690Asn]; XP_008194621.1:p.[Ser765Asn]","LOC103313361",103313361,null,"103313361 [Gene Symbol: LOC103313361] [Locus Tag: TcasGA2_TC015228] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313361] [Gene Type: protein-coding]","TcasGA2_TC015228; LOC103313361"]
[1266,"NC_007423.3",7000999,"SNV","T","C","Heterozygous",56,111,50.45,1,38,23,0.38,38.98,61,124,35,39,0.18,0.97,0.97,"no","C/T","No",1,200,"XP_008194622.1:c.[1951A>G]; XP_008194621.1:c.[2176A>G]","XP_008194622.1:p.[Asn651Asp]; XP_008194621.1:p.[Asn726Asp]","LOC103313361",103313361,null,"103313361 [Gene Symbol: LOC103313361] [Locus Tag: TcasGA2_TC015228] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313361] [Gene Type: protein-coding]","TcasGA2_TC015228; LOC103313361"]
[1267,"NC_007423.3",7025391,"SNV","C","T","Homozygous",20,20,100,1,7,17,0.29,38.05,24,24,11,14,null,1,1,"no","T/T","No",1,81.7,"XP_972482.1:c.733G>A","XP_972482.1:p.Ala245Thr","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1268,"NC_007423.3",7025415,"SNV","G","A","Homozygous",22,22,100,1,9,19,0.32,38.32,28,28,14,15,null,1,1,"no","A/A","No",1,87.7,"XP_972482.1:c.709C>T","XP_972482.1:p.His237Tyr","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1269,"NC_007423.3",7027834,"SNV","A","T","Homozygous",20,20,100,1,12,17,0.41,36.5,29,29,12,14,null,1,1,"no","T/T","No",1,81.7,"XP_972529.1:c.[1065-105A>T]; XP_008194624.1:c.[1103A>T]","XP_008194624.1:p.*368Leu","LOC661264",661264,null,"661264 [Gene Symbol: LOC661264] [Locus Tag: TcasGA2_TC015484] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase Chk2] [Gene Type: protein-coding]","LOC661264; TcasGA2_TC015484"]
[1270,"NC_007423.3",7062000,"SNV","G","C","Homozygous",20,20,100,1,10,11,0.48,39.05,21,21,12,13,null,1,1,"no","C/C","No",1,80.12,"XP_008194628.1:c.914G>C","XP_008194628.1:p.Ser305Thr","LOC661596",661596,null,"661596 [Gene Symbol: LOC661596] [Locus Tag: TcasGA2_TC015487] [Chromosome: LG8] [Map Location: ] [Description: cytochrome P450 9e2] [Gene Type: protein-coding]","LOC661596; TcasGA2_TC015487; CYP9Z7"]
[1271,"NC_007423.3",7084400,"SNV","A","G","Homozygous",21,21,100,1,11,16,0.41,38.86,27,27,14,14,null,1,1,"no","G/G","No",1,83.1,"XP_008196695.1:c.2170A>G","XP_008196695.1:p.Ile724Val","LOC655218",655218,null,"655218 [Gene Symbol: LOC655218] [Locus Tag: TcasGA2_TC006310] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase ATR] [Gene Type: protein-coding]","LOC655218; TcasGA2_TC006310; ATR; mei-41"]
[1272,"NC_007423.3",7121056,"SNV","G","A","Homozygous",25,25,100,1,18,11,0.38,38.8,29,29,17,18,null,1,1,"no","A/A","No",1,96.73,"XP_008196698.1:c.2447G>A","XP_008196698.1:p.Ser816Asn","LOC655542",655542,null,"655542 [Gene Symbol: LOC655542] [Locus Tag: TcasGA2_TC006313] [Chromosome: LG8] [Map Location: ] [Description: ribosome biogenesis protein BMS1 homolog] [Gene Type: protein-coding]","TcasGA2_TC006313; LOC655542"]
[1273,"NC_007423.3",7121521,"SNV","C","A","Homozygous",26,26,100,1,12,14,0.46,38.04,26,26,16,19,null,1,1,"no","A/A","No",1,99.74,"XP_008196698.1:c.2912C>A","XP_008196698.1:p.Ala971Glu","LOC655542",655542,null,"655542 [Gene Symbol: LOC655542] [Locus Tag: TcasGA2_TC006313] [Chromosome: LG8] [Map Location: ] [Description: ribosome biogenesis protein BMS1 homolog] [Gene Type: protein-coding]","TcasGA2_TC006313; LOC655542"]
[1274,"NC_007423.3",7122159,"SNV","G","A","Homozygous",22,22,100,1,12,12,0.5,37.73,24,24,12,12,null,1,1,"no","A/A","No",1,87.71,"XP_008196698.1:c.3500G>A","XP_008196698.1:p.Arg1167Lys","LOC655542",655542,null,"655542 [Gene Symbol: LOC655542] [Locus Tag: TcasGA2_TC006313] [Chromosome: LG8] [Map Location: ] [Description: ribosome biogenesis protein BMS1 homolog] [Gene Type: protein-coding]","TcasGA2_TC006313; LOC655542"]
[1275,"NC_007423.3",7123947,"SNV","A","C","Homozygous",20,20,100,1,5,15,0.25,38.95,20,20,9,12,null,1,1,"no","C/C","No",1,80.12,"XP_015838034.1:c.538T>G","XP_015838034.1:p.Phe180Val","LOC107398451",107398451,null,"107398451 [Gene Symbol: LOC107398451] [Locus Tag: TcasGA2_TC005828] [Chromosome: LG8] [Map Location: ] [Description: zinc finger protein 142-like] [Gene Type: protein-coding]","LOC107398451; TcasGA2_TC005828"]
[1276,"NC_007423.3",7141397,"SNV","A","T","Homozygous",25,25,100,1,13,12,0.48,37,25,25,12,16,null,1,1,"no","T/T","No",1,96.73,"XP_976162.1:c.658A>T","XP_976162.1:p.Thr220Ser","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1277,"NC_007423.3",7141639,"SNV","G","C","Homozygous",21,21,100,1,11,16,0.41,36.81,27,27,13,15,null,1,1,"no","C/C","No",1,83.12,"XP_976162.1:c.853G>C","XP_976162.1:p.Ala285Pro","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1278,"NC_007423.3",7143691,"SNV","C","T","Homozygous",20,20,100,1,4,18,0.18,38.55,22,22,11,11,null,1,1,"no","T/T","No",1,81.69,"XP_976162.1:c.2725C>T","XP_976162.1:p.Leu909Phe","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1279,"NC_007423.3",7144080,"SNV","G","C","Homozygous",24,24,100,1,14,13,0.48,39.17,27,27,13,16,null,1,1,"no","C/C","No",1,92.15,"XP_976162.1:c.3114G>C","XP_976162.1:p.Glu1038Asp","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1280,"NC_007423.3",7144226,"SNV","C","G","Homozygous",21,21,100,1,5,16,0.24,36.38,21,21,12,12,null,1,1,"no","G/G","No",1,83.09,"XP_976162.1:c.3260C>G","XP_976162.1:p.Ala1087Gly","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1281,"NC_007423.3",7144276,"SNV","T","C","Homozygous",25,25,100,1,13,13,0.5,38.44,26,26,13,16,null,1,1,"no","C/C","No",1,95.16,"XP_976162.1:c.3310T>C","XP_976162.1:p.Phe1104Leu","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1282,"NC_007423.3",7146021,"SNV","A","G","Homozygous",29,29,100,1,12,22,0.35,39,34,34,16,13,null,1,1,"no","G/G","No",1,107.18,"XP_976162.1:c.4519A>G","XP_976162.1:p.Ile1507Val","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1283,"NC_007423.3","7146069..7146071","MNV","CAG","GCT","Homozygous",33,33,100,1,17,17,0.5,38.26,34,34,19,18,null,1,1,"no","GCT/GCT","No",1,200,"XP_976162.1:c.4567_4569delCAGinsGCT","XP_976162.1:p.Gln1523Ala","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1286,"NC_007423.3",7239418,"SNV","A","T","Homozygous",23,23,100,1,12,12,0.5,36.48,24,24,12,16,null,1,1,"no","T/T","No",1,90.73,"XP_969131.1:c.[988A>T]; XP_008196717.1:c.[988A>T]","XP_969131.1:p.[Thr330Ser]; XP_008196717.1:p.[Thr330Ser]","LOC657587",657587,null,"657587 [Gene Symbol: LOC657587] [Locus Tag: TcasGA2_TC006327] [Chromosome: LG8] [Map Location: ] [Description: DIS3-like exonuclease 2] [Gene Type: protein-coding]","LOC657587; TcasGA2_TC006327"]
[1287,"NC_007423.3",7313363,"SNV","T","A","Homozygous",30,30,100,1,17,13,0.43,36.2,30,30,14,22,null,1,1,"no","A/A","No",1,111.78,"XP_969567.1:c.895A>T","XP_969567.1:p.Thr299Ser","LOC658061",658061,null,"658061 [Gene Symbol: LOC658061] [Locus Tag: TcasGA2_TC005814] [Chromosome: LG8] [Map Location: ] [Description: 72 kDa inositol polyphosphate 5-phosphatase] [Gene Type: protein-coding]","LOC658061; TcasGA2_TC005814"]
[1288,"NC_007423.3",7316577,"SNV","C","A","Homozygous",21,21,100,1,15,12,0.44,35.48,27,27,9,13,null,1,1,"no","A/A","No",1,78.68,"XP_969645.1:c.134C>A","XP_969645.1:p.Pro45Gln","LOC658143",658143,null,"658143 [Gene Symbol: LOC658143] [Locus Tag: TcasGA2_TC006331] [Chromosome: LG8] [Map Location: ] [Description: hrp65 protein] [Gene Type: protein-coding]","TcasGA2_TC006331; LOC658143"]
[1289,"NC_007423.3",7316609,"SNV","T","C","Homozygous",20,20,100,1,5,15,0.25,37.9,20,20,9,12,null,1,1,"no","C/C","No",1,80.12,"XP_969645.1:c.166T>C","XP_969645.1:p.Ser56Pro","LOC658143",658143,null,"658143 [Gene Symbol: LOC658143] [Locus Tag: TcasGA2_TC006331] [Chromosome: LG8] [Map Location: ] [Description: hrp65 protein] [Gene Type: protein-coding]","TcasGA2_TC006331; LOC658143"]
[1292,"NC_007423.3",7391447,"SNV","C","A","Heterozygous",11,26,42.31,1,7,8,0.47,39,15,30,8,6,0.1,0.68,1,"no","A/C","No",1,76.93,"XP_015838205.1:c.319C>A","XP_015838205.1:p.Leu107Ile","LOC107398497",107398497,null,"107398497 [Gene Symbol: LOC107398497] [Locus Tag: TcasGA2_TC006339] [Chromosome: LG8] [Map Location: ] [Description: gastrula zinc finger protein XlCGF49.1-like] [Gene Type: protein-coding]","TcasGA2_TC006339; LOC107398497"]
[1293,"NC_007423.3",7411736,"SNV","C","A","Heterozygous",19,28,67.86,1,18,6,0.25,36.53,24,33,6,12,-1.99,0.89,0.93,"no","A/C","No",1,50.25,"XP_015838122.1:c.[542G>T]; XP_015838125.1:c.[542G>T]; XP_015838124.1:c.[542G>T]; XP_015838123.1:c.[542G>T]","XP_015838122.1:p.[Arg181Leu]; XP_015838125.1:p.[Arg181Leu]; XP_015838124.1:p.[Arg181Leu]; XP_015838123.1:p.[Arg181Leu]","LOC107398474",107398474,null,"107398474 [Gene Symbol: LOC107398474] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sialin-like] [Gene Type: protein-coding]","LOC107398474"]
[1297,"NC_007423.3",7434834,"SNV","T","C","Homozygous",26,26,100,1,19,9,0.32,38,28,28,17,20,null,1,1,"no","C/C","No",1,98.17,"XP_015838038.1:c.169A>G","XP_015838038.1:p.Ser57Gly","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1298,"NC_007423.3",7434837,"SNV","C","T","Heterozygous",14,23,60.87,1,13,2,0.13,38.5,15,25,12,11,1.2,0.73,0.83,"no","C/T","No",1,64.61,"XP_015838038.1:c.166G>A","XP_015838038.1:p.Glu56Lys","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1299,"NC_007423.3",7439547,"SNV","T","C","Heterozygous",9,20,45,1,2,7,0.22,39.56,9,22,3,4,1.56,0.25,1,"no","C/T","No",1,72.94,"XP_015838039.1:c.1078A>G","XP_015838039.1:p.Ile360Val","LOC107398453",107398453,null,"107398453 [Gene Symbol: LOC107398453] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: polycystic kidney disease protein 1-like 2] [Gene Type: protein-coding]","LOC107398453"]
[1300,"NC_007423.3",7443000,"SNV","C","T","Heterozygous",13,22,59.09,1,5,9,0.36,38.08,14,23,6,8,0.43,0.95,1,"no","C/T","No",1,67.32,"XP_008196749.1:c.2785G>A","XP_008196749.1:p.Glu929Lys","LOC659665",659665,null,"659665 [Gene Symbol: LOC659665] [Locus Tag: TcasGA2_TC005802] [Chromosome: LG8] [Map Location: ] [Description: GPI inositol-deacylase] [Gene Type: protein-coding]","LOC659665; TcasGA2_TC005802"]
[1301,"NC_007423.3",7445717,"SNV","C","T","Homozygous",20,20,100,1,13,7,0.35,38.85,20,20,10,14,null,1,1,"no","T/T","No",1,81.69,"XP_008196749.1:c.499G>A","XP_008196749.1:p.Val167Ile","LOC659665",659665,null,"659665 [Gene Symbol: LOC659665] [Locus Tag: TcasGA2_TC005802] [Chromosome: LG8] [Map Location: ] [Description: GPI inositol-deacylase] [Gene Type: protein-coding]","LOC659665; TcasGA2_TC005802"]
[1302,"NC_007423.3",7458785,"SNV","A","T","Heterozygous",10,20,50,1,5,6,0.45,36.4,11,21,6,7,0.83,0.54,0.78,"no","A/T","No",1,81.53,"XP_971167.2:c.558T>A","XP_971167.2:p.Asn186Lys","LOC659802",659802,null,"659802 [Gene Symbol: LOC659802] [Locus Tag: TcasGA2_TC030778] [Chromosome: LG8] [Map Location: ] [Description: SET and MYND domain-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC030778; LOC659802"]
[1303,"NC_007423.3",7458826,"SNV","C","G","Heterozygous",10,21,47.62,1,6,7,0.46,38.6,13,25,6,5,0.53,0.46,0.7,"no","C/G","No",1,81.47,"XP_971167.2:c.517G>C","XP_971167.2:p.Asp173His","LOC659802",659802,null,"659802 [Gene Symbol: LOC659802] [Locus Tag: TcasGA2_TC030778] [Chromosome: LG8] [Map Location: ] [Description: SET and MYND domain-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC030778; LOC659802"]
[1304,"NC_007423.3",7756117,"SNV","T","G","Heterozygous",10,21,47.62,1,6,4,0.4,38.8,10,25,5,6,1.83,0.11,1,"no","G/T","No",1,81.81,"XP_008196758.1:c.1867A>C","XP_008196758.1:p.Ile623Leu","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1305,"NC_007423.3",7756138,"SNV","T","A","Homozygous",27,27,100,1,21,12,0.36,37.3,33,33,15,18,null,1,1,"no","A/A","No",1,102.75,"XP_008196758.1:c.1846A>T","XP_008196758.1:p.Met616Leu","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1306,"NC_007423.3",7756151,"SNV","G","C","Homozygous",21,21,100,1,16,10,0.38,37.76,26,26,12,16,null,1,1,"no","C/C","No",1,83.12,"XP_008196758.1:c.1833C>G","XP_008196758.1:p.Asp611Glu","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1307,"NC_007423.3",7756267,"SNV","C","G","Homozygous",23,23,100,1,14,9,0.39,37.09,23,23,12,16,null,1,1,"no","G/G","No",1,89.12,"XP_008196758.1:c.1717G>C","XP_008196758.1:p.Glu573Gln","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1308,"NC_007423.3",7843982,"SNV","G","A","Heterozygous",11,25,44,1,7,6,0.46,37.18,13,27,7,7,-0.96,0.79,0.63,"no","A/G","No",1,83.37,"XP_008196762.1:c.[7391G>A]; XP_015838156.1:c.[7130G>A]; XP_015838157.1:c.[6983G>A]; XP_008196763.1:c.[7391G>A]; XP_008196764.1:c.[7001G>A]","XP_008196762.1:p.[Ser2464Asn]; XP_015838156.1:p.[Ser2377Asn]; XP_015838157.1:p.[Ser2328Asn]; XP_008196763.1:p.[Ser2464Asn]; XP_008196764.1:p.[Ser2334Asn]","LOC661278",661278,null,"661278 [Gene Symbol: LOC661278] [Locus Tag: TcasGA2_TC006356] [Chromosome: LG8] [Map Location: ] [Description: protein split ends] [Gene Type: protein-coding]","LOC661278; TcasGA2_TC006356"]
[1309,"NC_007423.3",7891834,"SNV","C","T","Homozygous",20,20,100,1,9,14,0.39,37.65,23,23,14,16,null,1,1,"no","T/T","No",1,81.7,"XP_972851.1:c.395G>A","XP_972851.1:p.Arg132Lys","LOC661607",661607,null,"661607 [Gene Symbol: LOC661607] [Locus Tag: TcasGA2_TC005774] [Chromosome: LG8] [Map Location: ] [Description: dnaJ homolog subfamily C member 28] [Gene Type: protein-coding]","LOC661607; TcasGA2_TC005774"]
[1310,"NC_007423.3",7891856,"SNV","G","A","Heterozygous",11,20,55,1,5,8,0.38,37.45,13,22,8,10,-0.65,0.87,0.99,"no","A/G","No",1,72.81,"XP_972851.1:c.373C>T","XP_972851.1:p.Gln125*","LOC661607",661607,null,"661607 [Gene Symbol: LOC661607] [Locus Tag: TcasGA2_TC005774] [Chromosome: LG8] [Map Location: ] [Description: dnaJ homolog subfamily C member 28] [Gene Type: protein-coding]","LOC661607; TcasGA2_TC005774"]
[1311,"NC_007423.3",7896527,"SNV","C","T","Homozygous",88,104,84.62,1,56,44,0.44,38.02,100,117,49,51,null,1,1,"no","T/T","No",1,71.7,"XP_015838210.1:c.[800C>T]; XP_972897.1:c.[800C>T]","XP_015838210.1:p.[Ser267Leu]; XP_972897.1:p.[Ser267Leu]","LOC661654",661654,null,"661654 [Gene Symbol: LOC661654] [Locus Tag: TcasGA2_TC006360] [Chromosome: LG8] [Map Location: ] [Description: translocation protein SEC62] [Gene Type: protein-coding]","TcasGA2_TC006360; LOC661654"]
[1312,"NC_007423.3","7896628^7896629","Insertion","-","AGA","Homozygous",84,87,96.55,1,33,55,0.38,37.23,88,91,41,51,null,1,1,"no","AGA/AGA","No",1,200,"XP_972897.1:c.[850_851insAGA]; XP_015838210.1:c.[850_851insAGA]","XP_972897.1:p.[Lys290_Asp291insLys]; XP_015838210.1:p.[Lys290_Asp291insLys]","LOC661654",661654,null,"661654 [Gene Symbol: LOC661654] [Locus Tag: TcasGA2_TC006360] [Chromosome: LG8] [Map Location: ] [Description: translocation protein SEC62] [Gene Type: protein-coding]","TcasGA2_TC006360; LOC661654"]
[1313,"NC_007423.3",7897455,"SNV","T","C","Heterozygous",56,83,67.47,1,18,41,0.31,36.91,59,91,31,36,-2.24,0.97,1,"no","C/T","No",1,127.97,"XP_972934.1:c.343A>G","XP_972934.1:p.Thr115Ala","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1314,"NC_007423.3",7897510,"SNV","G","T","Homozygous",68,76,89.47,1,36,38,0.49,38.06,74,83,35,42,null,1,1,"no","T/T","No",1,96.43,"XP_972934.1:c.288C>A","XP_972934.1:p.Asp96Glu","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1315,"NC_007423.3","7897735..7897739","Replacement","GGGAG","TTT","Heterozygous",51,70,72.86,1,15,50,0.23,39.22,65,86,41,40,1.39,0.97,1,"no","complex","No",1,200,"XP_972934.1:c.113_117delCTCCCinsAAA","XP_972934.1:p.Thr38fs","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1316,"NC_007423.3",7899305,"SNV","G","T","Heterozygous",27,54,50,1,21,11,0.34,37.04,32,66,19,22,1.04,0.59,0.86,"no","complex","No",1,200,"XP_972934.1:c.58C>A","XP_972934.1:p.Leu20Ile","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1317,"NC_007423.3",7899341,"SNV","C","T","Heterozygous",32,76,42.11,1,22,15,0.41,38.72,37,85,17,18,0.87,0.9,0.94,"no","C/T","No",1,200,"XP_972934.1:c.22G>A","XP_972934.1:p.Asp8Asn","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1318,"NC_007423.3",7900173,"SNV","T","G","Homozygous",88,88,100,1,47,48,0.49,38.17,95,95,49,52,null,1,1,"no","G/G","No",1,200,"XP_972976.2:c.2286A>C","XP_972976.2:p.Gln762His","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1319,"NC_007423.3",7900229,"SNV","C","A","Homozygous",72,84,85.71,1,36,49,0.42,36.71,85,98,40,40,null,0.99,1,"no","A/A","No",1,67.44,"XP_972976.2:c.2230G>T","XP_972976.2:p.Asp744Tyr","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1320,"NC_007423.3",7900366,"SNV","C","G","Homozygous",74,83,89.16,1,42,43,0.49,35.91,85,94,41,41,null,0.98,1,"no","G/G","No",1,103.9,"XP_972976.2:c.2093G>C","XP_972976.2:p.Gly698Ala","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1321,"NC_007423.3",7900783,"SNV","C","T","Homozygous",90,95,94.74,1,50,54,0.48,36.98,104,110,44,54,null,1,1,"no","T/T","No",1,159.55,"XP_972976.2:c.1723G>A","XP_972976.2:p.Asp575Asn","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1322,"NC_007423.3",7901948,"SNV","G","A","Homozygous",69,79,87.34,1,40,38,0.49,35.7,78,88,40,40,null,1,1,"no","A/A","No",1,76.1,"XP_972976.2:c.1166C>T","XP_972976.2:p.Ala389Val","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1323,"NC_007423.3",7902275,"SNV","C","T","Homozygous",89,89,100,1,44,59,0.43,37.55,103,103,52,56,null,1,1,"no","T/T","No",1,200,"XP_972976.2:c.839G>A","XP_972976.2:p.Gly280Asp","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1326,"NC_007423.3",7903100,"SNV","T","C","Heterozygous",40,94,42.55,1,19,27,0.41,37.42,46,106,21,25,-0.53,1,0.98,"no","C/T","No",1,200,"XP_972976.2:c.110A>G","XP_972976.2:p.Tyr37Cys","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1327,"NC_007423.3",7935924,"SNV","A","G","Homozygous",23,23,100,1,9,14,0.39,37.48,23,23,11,20,null,1,1,"no","G/G","No",1,89.12,"XP_973165.1:c.71T>C","XP_973165.1:p.Leu24Ser","LOC662061, LOC661942","662061 , 661942",null,"662061 [Gene Symbol: LOC662061] [Locus Tag: TcasGA2_TC006364] [Chromosome: LG8] [Map Location: ] [Description: mutS protein homolog 4] [Gene Type: protein-coding] || 661942 [Gene Symbol: LOC661942] [Locus Tag: TcasGA2_TC005767] [Chromosome: LG8] [Map Location: ] [Description: ubiquitin conjugation factor E4 B] [Gene Type: protein-coding]","TcasGA2_TC006364; LOC662061 || LOC661942; TcasGA2_TC005767"]
[1329,"NC_007423.3",8196478,"SNV","A","T","Heterozygous",8,23,34.78,1,8,0,0,37.25,8,24,5,6,-0.55,0.35,0.31,"no","A/T","No",1,50.72,"XP_973829.1:c.2083A>T","XP_973829.1:p.Asn695Tyr","LOC662652",662652,null,"662652 [Gene Symbol: LOC662652] [Locus Tag: TcasGA2_TC006380] [Chromosome: LG8] [Map Location: ] [Description: mitochondrial intermediate peptidase] [Gene Type: protein-coding]","LOC662652; TcasGA2_TC006380"]
[1330,"NC_007423.3",8236335,"SNV","T","G","Homozygous",21,21,100,1,12,17,0.41,39.19,29,29,11,11,null,1,1,"no","G/G","No",1,83.1,"XP_008196804.1:c.885A>C","XP_008196804.1:p.Leu295Phe","LOC662973",662973,null,"662973 [Gene Symbol: LOC662973] [Locus Tag: TcasGA2_TC005753] [Chromosome: LG8] [Map Location: ] [Description: antichymotrypsin-2] [Gene Type: protein-coding]","LOC662973; TcasGA2_TC005753; serpin21"]
[1331,"NC_007423.3",8256309,"SNV","T","C","Heterozygous",10,27,37.04,1,6,4,0.4,37.3,10,32,7,7,-0.08,0.5,0.89,"no","C/T","No",1,66.21,"XP_015838238.1:c.950A>G","XP_015838238.1:p.Asp317Gly","LOC663160",663160,null,"663160 [Gene Symbol: LOC663160] [Locus Tag: TcasGA2_TC005744] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 12] [Gene Type: protein-coding]","serpin12; TcasGA2_TC005744; LOC663160"]
[1338,"NC_007423.3",8281110,"SNV","T","C","Heterozygous",11,20,55,1,8,3,0.27,38.64,11,22,6,8,-0.46,0.77,0.75,"no","C/T","No",1,71.63,"XP_008196808.1:c.[1343A>G]; XP_008196807.1:c.[1343A>G]","XP_008196808.1:p.[Glu448Gly]; XP_008196807.1:p.[Glu448Gly]","LOC103313954",103313954,null,"103313954 [Gene Symbol: LOC103313954] [Locus Tag: TcasGA2_TC005739] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313954; TcasGA2_TC005739"]
[1339,"NC_007423.3",8352306,"SNV","G","C","Homozygous",23,23,100,1,6,18,0.25,38.17,24,24,11,15,null,1,1,"no","C/C","No",1,86.13,"XP_015838044.1:c.3989C>G","XP_015838044.1:p.Ser1330Cys","LOC103313993",103313993,null,"103313993 [Gene Symbol: LOC103313993] [Locus Tag: TcasGA2_TC005735] [Chromosome: LG8] [Map Location: ] [Description: sperm flagellar protein 2] [Gene Type: protein-coding]","TcasGA2_TC005735; LOC103313993"]
[1340,"NC_007423.3",8372891,"SNV","G","C","Homozygous",22,22,100,1,12,11,0.48,37.05,23,23,12,13,null,1,1,"no","C/C","No",1,86.13,"XP_008196742.1:c.[313G>C]; NP_001103249.1:c.[313G>C]","XP_008196742.1:p.[Ala105Pro]; NP_001103249.1:p.[Ala105Pro]","Tcas_6927",663445,"cys-loop ligand-gated ion channel subunit","663445 [Gene Symbol: Tcas_6927] [Locus Tag: TcasGA2_TC006392] [Chromosome: LG8] [Map Location: ] [Description: cys-loop ligand-gated ion channel subunit] [Gene Type: protein-coding]","TcasGA2_TC006392; Tcas_6927"]
[1341,"NC_007423.3",8450544,"SNV","A","G","Homozygous",20,20,100,1,9,11,0.45,39.2,20,20,10,16,null,1,1,"no","G/G","No",1,80.09,"XP_015838227.1:c.[532A>G]; XP_008196893.1:c.[574A>G]","XP_015838227.1:p.[Ile178Val]; XP_008196893.1:p.[Ile192Val]","LOC103313995",103313995,null,"103313995 [Gene Symbol: LOC103313995] [Locus Tag: TcasGA2_TC006401] [Chromosome: LG8] [Map Location: ] [Description: mast cell carboxypeptidase A] [Gene Type: protein-coding]","TcasGA2_TC006401; LOC103313995"]
[1343,"NC_007423.3",8510772,"SNV","A","G","Homozygous",20,20,100,1,7,13,0.35,37.75,20,20,10,15,null,1,1,"no","G/G","No",1,80.09,"XP_008196845.1:c.1327A>G","XP_008196845.1:p.Thr443Ala","LOC100141581",100141581,null,"100141581 [Gene Symbol: LOC100141581] [Locus Tag: TcasGA2_TC006412] [Chromosome: LG8] [Map Location: ] [Description: thioredoxin domain-containing protein 11] [Gene Type: protein-coding]","TcasGA2_TC006412; LOC100141581"]
[1344,"NC_007423.3",8527126,"SNV","G","A","Homozygous",20,20,100,1,14,6,0.3,37.6,20,20,10,14,null,1,1,"no","A/A","No",1,81.69,"XP_975071.2:c.1394G>A","XP_975071.2:p.Arg465Lys","LOC663951",663951,null,"663951 [Gene Symbol: LOC663951] [Locus Tag: TcasGA2_TC006413] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC663951; TcasGA2_TC006413"]
[1345,"NC_007423.3",8893495,"SNV","G","T","Homozygous",22,22,100,1,10,12,0.45,36.82,22,22,10,18,null,1,1,"no","T/T","No",1,87.71,"XP_008196861.1:c.1820C>A","XP_008196861.1:p.Pro607Gln","LOC664152",664152,null,"664152 [Gene Symbol: LOC664152] [Locus Tag: TcasGA2_TC005697] [Chromosome: LG8] [Map Location: ] [Description: ATP-dependent RNA helicase DHX36] [Gene Type: protein-coding]","LOC664152; DHX36; TcasGA2_TC005697"]
[1346,"NC_007423.3",9006164,"SNV","T","G","Homozygous",25,25,100,1,13,12,0.48,38.16,25,25,15,15,null,1,1,"no","G/G","No",1,95.14,"XP_015838240.1:c.[727T>G]; XP_001815657.1:c.[577T>G]; XP_015838241.1:c.[502T>G]","XP_015838240.1:p.[Trp243Gly]; XP_001815657.1:p.[Trp193Gly]; XP_015838241.1:p.[Trp168Gly]","LOC100142139",100142139,null,"100142139 [Gene Symbol: LOC100142139] [Locus Tag: TcasGA2_TC006423] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142139] [Gene Type: protein-coding]","LOC100142139; TcasGA2_TC006423"]
[1348,"NC_007423.3",9006357,"SNV","A","G","Homozygous",22,22,100,1,5,20,0.2,37.73,25,25,10,12,null,1,1,"no","G/G","No",1,86.11,"XP_015838241.1:c.[637A>G]; XP_015838240.1:c.[862A>G]; XP_001815657.1:c.[712A>G]","XP_015838241.1:p.[Thr213Ala]; XP_015838240.1:p.[Thr288Ala]; XP_001815657.1:p.[Thr238Ala]","LOC100142139",100142139,null,"100142139 [Gene Symbol: LOC100142139] [Locus Tag: TcasGA2_TC006423] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142139] [Gene Type: protein-coding]","LOC100142139; TcasGA2_TC006423"]
[1349,"NC_007423.3",9315350,"SNV","C","A","Homozygous",20,20,100,1,9,11,0.45,39.95,20,20,13,16,null,1,1,"no","A/A","No",1,81.69,"XP_015838172.1:c.121G>T","XP_015838172.1:p.Ala41Ser","LOC107398488",107398488,null,"107398488 [Gene Symbol: LOC107398488] [Locus Tag: TcasGA2_TC034084] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398488] [Gene Type: protein-coding]","LOC107398488; TcasGA2_TC034084"]
[1350,"NC_007423.3",9320740,"SNV","A","T","Homozygous",25,25,100,1,11,14,0.44,38,25,25,18,17,null,1,1,"no","T/T","No",1,96.74,"XP_015838174.1:c.[421-314T>A]; XP_015838171.1:c.[254A>T]","XP_015838171.1:p.Asn85Ile","LOC664273, LOC107398487","664273 , 107398487",null,"664273 [Gene Symbol: LOC664273] [Locus Tag: TcasGA2_TC031280] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC664273] [Gene Type: protein-coding] || 107398487 [Gene Symbol: LOC107398487] [Locus Tag: TcasGA2_TC006440] [Chromosome: LG8] [Map Location: ] [Description: P-granule-associated novel protein 1-like] [Gene Type: protein-coding]","TcasGA2_TC031280; LOC664273 || TcasGA2_TC006440; LOC107398487"]
[1351,"NC_007423.3",9326858,"SNV","A","G","Homozygous",20,20,100,1,10,12,0.45,37.6,22,22,14,16,null,1,1,"no","G/G","No",1,77.08,"XP_975385.1:c.1094A>G","XP_975385.1:p.Asp365Gly","LOC664285",664285,null,"664285 [Gene Symbol: LOC664285] [Locus Tag: TcasGA2_TC006442] [Chromosome: LG8] [Map Location: ] [Description: cytochrome P450-like protein] [Gene Type: protein-coding]","LOC664285; TcasGA2_TC006442"]
[1352,"NC_007423.3","9372061..9372062","MNV","CT","GC","Homozygous",27,27,100,1,14,13,0.48,35.46,27,27,12,16,null,1,1,"no","GC/GC","No",1,200,"XP_015838168.1:c.[864_865delCTinsGC]; XP_008194602.1:c.[885_886delCTinsGC]; XP_008194603.1:c.[864_865delCTinsGC]; XP_008194604.1:c.[729_730delCTinsGC]","XP_015838168.1:p.[Ser289Pro]; XP_008194602.1:p.[Ser296Pro]; XP_008194603.1:p.[Ser289Pro]; XP_008194604.1:p.[Ser244Pro]","LOC660719",660719,null,"660719 [Gene Symbol: LOC660719] [Locus Tag: TcasGA2_TC015234] [Chromosome: LG8] [Map Location: ] [Description: chorion peroxidase] [Gene Type: protein-coding]","LOC660719; TcasGA2_TC015234"]
[1353,"NC_007423.3",9373085,"SNV","T","C","Homozygous",20,20,100,1,19,4,0.17,38.8,23,23,11,13,null,1,1,"no","C/C","No",1,80.12,"XP_008194603.1:c.[1838T>C]; XP_008194602.1:c.[1859T>C]; XP_015838168.1:c.[1838T>C]; XP_008194604.1:c.[1703T>C]","XP_008194603.1:p.[Met613Thr]; XP_008194602.1:p.[Met620Thr]; XP_015838168.1:p.[Met613Thr]; XP_008194604.1:p.[Met568Thr]","LOC660719",660719,null,"660719 [Gene Symbol: LOC660719] [Locus Tag: TcasGA2_TC015234] [Chromosome: LG8] [Map Location: ] [Description: chorion peroxidase] [Gene Type: protein-coding]","LOC660719; TcasGA2_TC015234"]
[1354,"NC_007423.3",9381422,"SNV","C","G","Homozygous",29,29,100,1,11,21,0.34,36.48,32,32,13,19,null,1,1,"no","G/G","No",1,107.17,"XP_015838169.1:c.535C>G","XP_015838169.1:p.Leu179Val","LOC107398485",107398485,null,"107398485 [Gene Symbol: LOC107398485] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter-like] [Gene Type: protein-coding]","LOC107398485"]
[1355,"NC_007423.3","9382298..9382299","MNV","GC","AT","Homozygous",20,20,100,1,3,17,0.15,38,20,20,10,10,null,1,1,"no","AT/AT","No",1,200,"XP_015838169.1:c.832_833delGCinsAT","XP_015838169.1:p.Ala278Ile","LOC107398485",107398485,null,"107398485 [Gene Symbol: LOC107398485] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter-like] [Gene Type: protein-coding]","LOC107398485"]
[1356,"NC_007423.3",9395340,"SNV","G","T","Homozygous",24,24,100,1,15,12,0.44,38.46,27,27,11,17,null,1,1,"no","T/T","No",1,93.73,"XP_015838297.1:c.[574G>T]; XP_971806.1:c.[562G>T]","XP_015838297.1:p.[Val192Leu]; XP_971806.1:p.[Val188Leu]","LOC660485",660485,null,"660485 [Gene Symbol: LOC660485] [Locus Tag: TcasGA2_TC015238] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660485] [Gene Type: protein-coding]","LOC660485; TcasGA2_TC015238"]
[1357,"NC_007423.3",9446734,"SNV","C","T","Homozygous",23,23,100,1,16,16,0.5,36.7,32,32,16,14,null,1,1,"no","T/T","No",1,90.73,"XP_015838046.1:c.914C>T","XP_015838046.1:p.Ser305Phe","LOC659859",659859,null,"659859 [Gene Symbol: LOC659859] [Locus Tag: TcasGA2_TC015245] [Chromosome: LG8] [Map Location: ] [Description: hornerin] [Gene Type: protein-coding]","TcasGA2_TC015245; LOC659859"]
[1358,"NC_007423.3","9452706..9452707","MNV","GA","AG","Heterozygous",14,27,51.85,1,14,9,0.39,38.93,23,38,11,16,2.89,0.58,1,"no","complex","No",1,200,"XP_015838046.1:c.3179_3180delGAinsAG","XP_015838046.1:p.Arg1060Gln","LOC659859",659859,null,"659859 [Gene Symbol: LOC659859] [Locus Tag: TcasGA2_TC015245] [Chromosome: LG8] [Map Location: ] [Description: hornerin] [Gene Type: protein-coding]","TcasGA2_TC015245; LOC659859"]
[1360,"NC_007423.3",9469605,"SNV","T","C","Homozygous",20,20,100,1,14,11,0.44,37.6,25,25,12,16,null,1,1,"no","C/C","No",1,80.11,"XP_970733.3:c.1237A>G","XP_970733.3:p.Ser413Gly","LOC659323",659323,null,"659323 [Gene Symbol: LOC659323] [Locus Tag: TcasGA2_TC015473] [Chromosome: LG8] [Map Location: ] [Description: zinc finger protein SNAI1] [Gene Type: protein-coding]","TcasGA2_TC015473; LOC659323"]
[1364,"NC_007423.3",9510184,"SNV","A","C","Heterozygous",9,21,42.86,1,8,5,0.38,38.89,13,25,7,7,0.96,0.46,0.76,"no","A/C","No",1,69.75,"XP_008194583.2:c.[259+1737A>C]; XP_015838134.1:c.[320A>C]; XP_008194584.2:c.[259+1737A>C]","XP_015838134.1:p.Glu107Ala","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1382,"NC_007423.3","9669372..9669373","MNV","AT","GC","Homozygous",24,24,100,1,11,19,0.37,38.98,30,30,15,20,null,1,1,"no","GC/GC","No",1,200,"XP_001808223.1:c.235_236delATinsGC","XP_001808223.1:p.Ile79Ala","LOC100142248",100142248,null,"100142248 [Gene Symbol: LOC100142248] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: macrophage migration inhibitory factor homolog] [Gene Type: protein-coding]","LOC100142248"]
[1383,"NC_007423.3",9690828,"SNV","A","G","Homozygous",22,22,100,1,13,13,0.5,36.77,26,26,14,14,null,1,1,"no","G/G","No",1,86.11,"XP_008194606.1:c.3773T>C","XP_008194606.1:p.Phe1258Ser","LOC103313351",103313351,null,"103313351 [Gene Symbol: LOC103313351] [Locus Tag: TcasGA2_TC015446] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313351; TcasGA2_TC015446"]
[1387,"NC_007423.3",9878887,"SNV","T","G","Homozygous",20,20,100,1,16,7,0.3,38.25,23,23,10,16,null,1,1,"no","G/G","No",1,80.09,"XP_015838087.1:c.[2010T>G]; XP_015838088.1:c.[2010T>G]","XP_015838087.1:p.[Ser670Arg]; XP_015838088.1:p.[Ser670Arg]","LOC103314047, LOC656452","103314047 , 656452",null,"103314047 [Gene Symbol: LOC103314047] [Locus Tag: TcasGA2_TC005670] [Chromosome: LG8] [Map Location: ] [Description: epidermal growth factor-like protein 8] [Gene Type: protein-coding] || 656452 [Gene Symbol: LOC656452] [Locus Tag: TcasGA2_TC006453] [Chromosome: LG8] [Map Location: ] [Description: lysosomal alpha-mannosidase] [Gene Type: protein-coding]","TcasGA2_TC005670; LOC103314047 || LOC656452; TcasGA2_TC006453"]
[1388,"NC_007423.3",9901278,"SNV","A","G","Heterozygous",11,20,55,1,6,6,0.5,38.82,12,21,5,5,1.82,0.74,1,"no","A/G","No",1,71.78,"NP_001153727.1:c.458A>G","NP_001153727.1:p.Lys153Arg","LOC103314047, LOC656698","103314047 , 656698","lysosomal alpha-mannosidase-like","103314047 [Gene Symbol: LOC103314047] [Locus Tag: TcasGA2_TC005670] [Chromosome: LG8] [Map Location: ] [Description: epidermal growth factor-like protein 8] [Gene Type: protein-coding] || 656698 [Gene Symbol: LOC656698] [Locus Tag: TcasGA2_TC006456] [Chromosome: LG8] [Map Location: ] [Description: lysosomal alpha-mannosidase-like] [Gene Type: protein-coding]","TcasGA2_TC005670; LOC103314047 || TcasGA2_TC006456; LOC656698"]
[1389,"NC_007423.3",9977728,"SNV","C","T","Heterozygous",11,26,42.31,1,2,9,0.18,38.27,11,27,6,7,0.03,0.39,0.45,"no","C/T","No",1,80.43,"XP_008197059.1:c.239C>T","XP_008197059.1:p.Thr80Ile","LOC657430",657430,null,"657430 [Gene Symbol: LOC657430] [Locus Tag: TcasGA2_TC006462] [Chromosome: LG8] [Map Location: ] [Description: exosome complex exonuclease RRP6] [Gene Type: protein-coding]","TcasGA2_TC006462; LOC657430"]
[1390,"NC_007423.3",9977947,"SNV","T","G","Heterozygous",8,22,36.36,1,4,4,0.5,40.5,8,22,4,5,1.4,0.4,0.64,"no","G/T","No",1,54.02,"XP_008197059.1:c.458T>G","XP_008197059.1:p.Val153Gly","LOC657430",657430,null,"657430 [Gene Symbol: LOC657430] [Locus Tag: TcasGA2_TC006462] [Chromosome: LG8] [Map Location: ] [Description: exosome complex exonuclease RRP6] [Gene Type: protein-coding]","TcasGA2_TC006462; LOC657430"]
[1391,"NC_007423.3",9980763,"SNV","C","A","Heterozygous",12,34,35.29,1,9,3,0.25,37.25,12,39,5,10,-1.19,0.34,0.95,"no","A/C","No",1,67.4,"NP_001153709.1:c.913G>T","NP_001153709.1:p.Asp305Tyr","Eif-3p66",657510,"eukaryotic initiation factor 3 p66 subunit","657510 [Gene Symbol: Eif-3p66] [Locus Tag: TcasGA2_TC005665] [Chromosome: LG8] [Map Location: ] [Description: eukaryotic initiation factor 3 p66 subunit] [Gene Type: protein-coding]","Eif-3p66; TcasGA2_TC005665"]
[1392,"NC_007423.3",10083377,"SNV","C","A","Homozygous",20,20,100,1,13,10,0.43,38,23,23,11,16,null,1,1,"no","A/A","No",1,81.69,"XP_008197063.1:c.1603C>A","XP_008197063.1:p.His535Asn","LOC658144",658144,null,"658144 [Gene Symbol: LOC658144] [Locus Tag: TcasGA2_TC006465] [Chromosome: LG8] [Map Location: ] [Description: myosin 15] [Gene Type: protein-coding]","LOC658144; Myo15; TcasGA2_TC006465"]
[1393,"NC_007423.3",10086299,"SNV","G","A","Homozygous",20,20,100,1,7,15,0.32,38.7,22,22,12,15,null,1,1,"no","A/A","No",1,81.69,"XP_008197063.1:c.4309G>A","XP_008197063.1:p.Asp1437Asn","LOC658144",658144,null,"658144 [Gene Symbol: LOC658144] [Locus Tag: TcasGA2_TC006465] [Chromosome: LG8] [Map Location: ] [Description: myosin 15] [Gene Type: protein-coding]","LOC658144; Myo15; TcasGA2_TC006465"]
[1394,"NC_007423.3",10101219,"SNV","T","C","Homozygous",27,27,100,1,23,7,0.23,38,30,30,13,17,null,1,1,"no","C/C","No",1,101.18,"XP_976275.1:c.[589A>G]; XP_015838296.1:c.[589A>G]","XP_976275.1:p.[Thr197Ala]; XP_015838296.1:p.[Thr197Ala]","LOC658222",658222,null,"658222 [Gene Symbol: LOC658222] [Locus Tag: TcasGA2_TC005658] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC658222] [Gene Type: protein-coding]","LOC658222; TcasGA2_TC005658"]
[1395,"NC_007423.3",10110625,"SNV","C","G","Homozygous",28,28,100,1,19,12,0.39,36.57,31,31,12,18,null,1,1,"no","G/G","No",1,104.16,"XP_015838225.1:c.[2191G>C]; XP_969793.1:c.[156+2213C>G]","XP_015838225.1:p.Ala731Pro","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1396,"NC_007423.3",10110643,"SNV","A","G","Homozygous",33,33,100,1,17,19,0.47,35.12,36,36,13,17,null,1,1,"no","G/G","No",1,119.21,"XP_015838225.1:c.[2173T>C]; XP_969793.1:c.[156+2231A>G]","XP_015838225.1:p.Cys725Arg","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1397,"NC_007423.3",10110765,"SNV","G","C","Homozygous",22,22,100,1,5,17,0.23,38.41,22,22,9,16,null,1,1,"no","C/C","No",1,86.14,"XP_015838225.1:c.[2051C>G]; XP_969793.1:c.[156+2353G>C]","XP_015838225.1:p.Pro684Arg","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1398,"NC_007423.3",10110796,"SNV","T","A","Homozygous",21,21,100,1,8,14,0.36,37.38,22,22,9,13,null,1,1,"no","A/A","No",1,81.69,"XP_969793.1:c.[156+2384T>A]; XP_015838225.1:c.[2020A>T]","XP_015838225.1:p.Thr674Ser","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1399,"NC_007423.3",10112734,"SNV","T","C","Homozygous",20,20,100,1,8,17,0.32,36.55,25,25,14,15,null,1,1,"no","C/C","No",1,80.12,"XP_015838225.1:c.[130A>G]; XP_969793.1:c.[156+4322T>C]","XP_015838225.1:p.Ile44Val","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1400,"NC_007423.3",10125287,"SNV","T","A","Homozygous",25,25,100,1,12,15,0.44,38,27,27,15,18,null,1,1,"no","A/A","No",1,96.73,"XP_015838222.1:c.[4869A>T]; XP_008197064.1:c.[4869A>T]; XP_015838223.1:c.[4626A>T]","XP_015838222.1:p.[Lys1623Asn]; XP_008197064.1:p.[Lys1623Asn]; XP_015838223.1:p.[Lys1542Asn]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1401,"NC_007423.3",10125303,"SNV","C","T","Homozygous",34,34,100,1,16,24,0.4,37.29,40,40,20,22,null,1,1,"no","T/T","No",1,123.81,"XP_015838222.1:c.[4853G>A]; XP_015838223.1:c.[4610G>A]; XP_008197064.1:c.[4853G>A]","XP_015838222.1:p.[Ser1618Asn]; XP_015838223.1:p.[Ser1537Asn]; XP_008197064.1:p.[Ser1618Asn]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1402,"NC_007423.3","10125421..10125422","MNV","TA","CT","Homozygous",22,22,100,1,12,13,0.48,37.07,25,25,10,17,null,1,1,"no","CT/CT","No",1,200,"XP_015838222.1:c.[4734_4735delTAinsAG]; XP_008197064.1:c.[4734_4735delTAinsAG]; XP_015838223.1:c.[4491_4492delTAinsAG]","XP_015838222.1:p.[Ile1579Val]; XP_008197064.1:p.[Ile1579Val]; XP_015838223.1:p.[Ile1498Val]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1403,"NC_007423.3",10126482,"SNV","C","T","Homozygous",20,20,100,1,17,5,0.23,38.55,22,22,12,14,null,1,1,"no","T/T","No",1,81.69,"XP_015838223.1:c.[3431G>A]; XP_008197064.1:c.[3674G>A]; XP_015838222.1:c.[3674G>A]","XP_015838223.1:p.[Ser1144Asn]; XP_008197064.1:p.[Ser1225Asn]; XP_015838222.1:p.[Ser1225Asn]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1404,"NC_007423.3",10126494,"SNV","T","C","Homozygous",20,20,100,1,17,5,0.23,37.45,22,22,12,15,null,1,1,"no","C/C","No",1,80.12,"XP_015838222.1:c.[3662A>G]; XP_008197064.1:c.[3662A>G]; XP_015838223.1:c.[3419A>G]","XP_015838222.1:p.[Gln1221Arg]; XP_008197064.1:p.[Gln1221Arg]; XP_015838223.1:p.[Gln1140Arg]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1405,"NC_007423.3",10126922,"SNV","G","T","Homozygous",23,23,100,1,11,14,0.44,39.43,25,25,10,17,null,1,1,"no","T/T","No",1,90.72,"XP_008197064.1:c.[3234C>A]; XP_015838222.1:c.[3234C>A]; XP_015838223.1:c.[2991C>A]","XP_008197064.1:p.[His1078Gln]; XP_015838222.1:p.[His1078Gln]; XP_015838223.1:p.[His997Gln]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1406,"NC_007423.3",10128355,"SNV","T","C","Homozygous",22,22,100,1,12,12,0.5,38.41,24,24,15,15,null,1,1,"no","C/C","No",1,86.14,"XP_015838222.1:c.[1801A>G]; XP_008197064.1:c.[1801A>G]; XP_015838223.1:c.[1735+66A>G]","XP_015838222.1:p.[Lys601Glu]; XP_008197064.1:p.[Lys601Glu]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1407,"NC_007423.3",10149879,"SNV","G","A","Homozygous",22,22,100,1,11,11,0.5,38.27,22,22,13,15,null,1,1,"no","A/A","No",1,87.7,"XP_015838053.1:c.2560G>A","XP_015838053.1:p.Ala854Thr","LOC658521",658521,null,"658521 [Gene Symbol: LOC658521] [Locus Tag: TcasGA2_TC006467] [Chromosome: LG8] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC658521; TcasGA2_TC006467"]
[1408,"NC_007423.3",10177350,"SNV","T","C","Homozygous",23,23,100,1,9,16,0.36,38.35,25,25,15,13,null,1,1,"no","C/C","No",1,89.14,"XP_008197071.1:c.1055A>G","XP_008197071.1:p.Asn352Ser","LOC658890",658890,null,"658890 [Gene Symbol: LOC658890] [Locus Tag: TcasGA2_TC005649] [Chromosome: LG8] [Map Location: ] [Description: zinc finger CCHC domain-containing protein 4] [Gene Type: protein-coding]","LOC658890; TcasGA2_TC005649"]
[1409,"NC_007423.3",10243430,"SNV","C","A","Homozygous",21,21,100,1,8,13,0.38,38.19,21,21,10,15,null,1,1,"no","A/A","No",1,84.69,"XP_970807.1:c.[539C>A]; XP_008197080.1:c.[539C>A]","XP_970807.1:p.[Thr180Asn]; XP_008197080.1:p.[Thr180Asn]","LOC659405",659405,null,"659405 [Gene Symbol: LOC659405] [Locus Tag: TcasGA2_TC006477] [Chromosome: LG8] [Map Location: ] [Description: histone acetyltransferase KAT6A] [Gene Type: protein-coding]","LOC659405; TcasGA2_TC006477"]
[1410,"NC_007423.3",10243451,"SNV","G","A","Homozygous",20,20,100,1,8,12,0.4,38.2,20,20,12,14,null,1,1,"no","A/A","No",1,81.69,"XP_970807.1:c.[560G>A]; XP_008197080.1:c.[560G>A]","XP_970807.1:p.[Ser187Asn]; XP_008197080.1:p.[Ser187Asn]","LOC659405",659405,null,"659405 [Gene Symbol: LOC659405] [Locus Tag: TcasGA2_TC006477] [Chromosome: LG8] [Map Location: ] [Description: histone acetyltransferase KAT6A] [Gene Type: protein-coding]","LOC659405; TcasGA2_TC006477"]
[1411,"NC_007423.3",10411135,"SNV","T","C","Homozygous",24,24,100,1,5,20,0.2,38.42,25,25,12,15,null,1,1,"no","C/C","No",1,92.15,"XP_015838220.1:c.[196A>G]; XP_008197087.1:c.[196A>G]","XP_015838220.1:p.[Ser66Gly]; XP_008197087.1:p.[Ser66Gly]","LOC659803",659803,null,"659803 [Gene Symbol: LOC659803] [Locus Tag: TcasGA2_TC005640] [Chromosome: LG8] [Map Location: ] [Description: protein NDNF] [Gene Type: protein-coding]","TcasGA2_TC005640; LOC659803"]
[1412,"NC_007423.3",10412233,"SNV","T","C","Homozygous",23,23,100,1,13,17,0.43,35.17,30,30,8,15,null,1,1,"no","C/C","No",1,89.14,"XP_008197087.1:c.[43A>G]; XP_015838220.1:c.[43A>G]","XP_008197087.1:p.[Ile15Val]; XP_015838220.1:p.[Ile15Val]","LOC659803",659803,null,"659803 [Gene Symbol: LOC659803] [Locus Tag: TcasGA2_TC005640] [Chromosome: LG8] [Map Location: ] [Description: protein NDNF] [Gene Type: protein-coding]","TcasGA2_TC005640; LOC659803"]
[1413,"NC_007423.3",10416755,"SNV","C","G","Heterozygous",9,26,34.62,1,3,7,0.3,38.56,10,29,8,8,-0.57,0.92,1,"no","C/G","No",1,54.99,"XP_015838307.1:c.931C>G","XP_015838307.1:p.Leu311Val","LOC659872",659872,null,"659872 [Gene Symbol: LOC659872] [Locus Tag: TcasGA2_TC006482] [Chromosome: LG8] [Map Location: ] [Description: somatostatin receptor type 5] [Gene Type: protein-coding]","TcasGA2_TC006482; LOC659872"]
[1414,"NC_007423.3",10416771,"SNV","C","T","Heterozygous",12,27,44.44,1,3,10,0.23,38.92,13,28,7,7,-0.56,0.97,1,"no","C/T","No",1,90.36,"XP_015838307.1:c.947C>T","XP_015838307.1:p.Thr316Ile","LOC659872",659872,null,"659872 [Gene Symbol: LOC659872] [Locus Tag: TcasGA2_TC006482] [Chromosome: LG8] [Map Location: ] [Description: somatostatin receptor type 5] [Gene Type: protein-coding]","TcasGA2_TC006482; LOC659872"]
[1415,"NC_007423.3",10430867,"SNV","C","T","Homozygous",26,26,100,1,20,9,0.31,38.04,29,29,14,16,null,1,1,"no","T/T","No",1,99.74,"XP_015838267.1:c.232G>A","XP_015838267.1:p.Glu78Lys","LOC100142185",100142185,null,"100142185 [Gene Symbol: LOC100142185] [Locus Tag: TcasGA2_TC005635] [Chromosome: LG8] [Map Location: ] [Description: mite allergen Der p 3] [Gene Type: protein-coding]","TcasGA2_TC005635; H63; LOC100142185"]
[1416,"NC_007423.3",10430869,"SNV","G","T","Homozygous",26,26,100,1,20,9,0.31,37.5,29,29,14,16,null,1,1,"no","T/T","No",1,99.75,"XP_015838267.1:c.230C>A","XP_015838267.1:p.Ala77Glu","LOC100142185",100142185,null,"100142185 [Gene Symbol: LOC100142185] [Locus Tag: TcasGA2_TC005635] [Chromosome: LG8] [Map Location: ] [Description: mite allergen Der p 3] [Gene Type: protein-coding]","TcasGA2_TC005635; H63; LOC100142185"]
[1417,"NC_007423.3",10520802,"SNV","T","A","Homozygous",27,27,100,1,11,20,0.35,36.96,31,31,17,18,null,1,1,"no","A/A","No",1,102.75,"XP_015838078.1:c.[1078-16782A>T]; XP_015838076.1:c.[107A>T]; XP_972642.2:c.[1078-16782A>T]; XP_015838080.1:c.[1078-16782A>T]; XP_015838079.1:c.[1078-16782A>T]","XP_015838076.1:p.Lys36Met","LOC661389, LOC107398462","661389 , 107398462",null,"661389 [Gene Symbol: LOC661389] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: synaptotagmin 15] [Gene Type: protein-coding] || 107398462 [Gene Symbol: LOC107398462] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: aldehyde dehydrogenase, dimeric NADP-preferring-like] [Gene Type: protein-coding]","LOC661389; Syt15 || LOC107398462"]
[1418,"NC_007423.3",10547238,"SNV","T","C","Homozygous",20,20,100,1,10,10,0.5,37.9,20,20,12,14,null,1,1,"no","C/C","No",1,80.12,"XP_008197105.1:c.2633A>G","XP_008197105.1:p.Asp878Gly","LOC661389, LOC103314057","661389 , 103314057",null,"661389 [Gene Symbol: LOC661389] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: synaptotagmin 15] [Gene Type: protein-coding] || 103314057 [Gene Symbol: LOC103314057] [Locus Tag: TcasGA2_TC005621] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC661389; Syt15 || LOC103314057; TcasGA2_TC005621"]
[1419,"NC_007423.3",10548159,"SNV","C","T","Homozygous",24,24,100,1,9,17,0.35,37.17,26,26,12,14,null,1,1,"no","T/T","No",1,93.73,"XP_008197105.1:c.1712G>A","XP_008197105.1:p.Gly571Asp","LOC661389, LOC103314057","661389 , 103314057",null,"661389 [Gene Symbol: LOC661389] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: synaptotagmin 15] [Gene Type: protein-coding] || 103314057 [Gene Symbol: LOC103314057] [Locus Tag: TcasGA2_TC005621] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC661389; Syt15 || LOC103314057; TcasGA2_TC005621"]
[1420,"NC_007423.3",10564047,"SNV","T","G","Homozygous",20,20,100,1,12,13,0.48,38.3,25,25,11,16,null,1,1,"no","G/G","No",1,80.09,"XP_008197115.1:c.[1748-3579A>C]; XP_008197113.1:c.[180A>C]; XP_008197112.1:c.[1787-3579A>C]; XP_008197114.1:c.[1754-3579A>C]; XP_015838056.1:c.[3346+315A>C]; XP_008197117.1:c.[1741+315A>C]; XP_008197120.1:c.[1723+2218A>C]; XP_015838057.1:c.[1796-3579A>C]; XP_008197116.1:c.[1748-3579A>C]; XP_008197118.1:c.[1742-3579A>C]; XP_008197111.1:c.[1790-3579A>C]; XP_008197121.1:c.[1709-3579A>C]; XP_008197110.1:c.[1793-3579A>C]","XP_008197113.1:p.Gln60His","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1421,"NC_007423.3","10565320..10565323","MNV","CGAC","TATT","Homozygous",25,25,100,1,14,16,0.47,37.97,30,30,18,20,null,1,1,"no","TATT/TATT","No",1,200,"XP_008197114.1:c.[1754-4855_1754-4852delGTCGinsAATA]; XP_008197117.1:c.[780_783delGTCGinsAATA]; XP_008197110.1:c.[1793-4855_1793-4852delGTCGinsAATA]; XP_015838056.1:c.[2385_2388delGTCGinsAATA]; XP_008197118.1:c.[1741+4655_1741+4658delGTCGinsAATA]; XP_008197121.1:c.[1708+2798_1708+2801delGTCGinsAATA]; XP_008197111.1:c.[1790-4855_1790-4852delGTCGinsAATA]; XP_008197116.1:c.[1748-4855_1748-4852delGTCGinsAATA]; XP_015838057.1:c.[1796-4855_1796-4852delGTCGinsAATA]; XP_008197112.1:c.[1787-4855_1787-4852delGTCGinsAATA]; XP_008197120.1:c.[1723+942_1723+945delGTCGinsAATA]; XP_008197115.1:c.[1748-4855_1748-4852delGTCGinsAATA]","XP_008197117.1:p.[Ser261Ile]; XP_015838056.1:p.[Ser796Ile]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1422,"NC_007423.3",10565751,"SNV","G","C","Homozygous",20,20,100,1,6,14,0.3,37.6,20,20,11,12,null,1,1,"no","C/C","No",1,80.11,"XP_008197121.1:c.[1708+2370C>G]; XP_008197120.1:c.[1723+514C>G]; XP_015838056.1:c.[1957C>G]; XP_008197110.1:c.[1793-5283C>G]; XP_008197115.1:c.[1748-5283C>G]; XP_008197117.1:c.[352C>G]; XP_008197111.1:c.[1790-5283C>G]; XP_008197116.1:c.[1748-5283C>G]; XP_015838057.1:c.[1796-5283C>G]; XP_008197114.1:c.[1754-5283C>G]; XP_008197112.1:c.[1787-5283C>G]; XP_008197118.1:c.[1741+4227C>G]","XP_015838056.1:p.[Leu653Val]; XP_008197117.1:p.[Leu118Val]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1423,"NC_007423.3",10567236,"SNV","G","A","Homozygous",20,20,100,1,12,9,0.43,39.45,21,21,14,15,null,1,1,"no","A/A","No",1,81.69,"XP_015838057.1:c.[1795+4631C>T]; XP_008197114.1:c.[1754-6768C>T]; XP_008197120.1:c.[752C>T]; XP_015838056.1:c.[752C>T]; XP_008197111.1:c.[1790-6768C>T]; XP_008197115.1:c.[1747+4631C>T]; XP_008197112.1:c.[1787-6768C>T]; XP_008197118.1:c.[1741+2742C>T]; XP_008197121.1:c.[1708+885C>T]; XP_008197110.1:c.[1793-6768C>T]; XP_008197116.1:c.[1747+6532C>T]","XP_008197120.1:p.[Thr251Met]; XP_015838056.1:p.[Thr251Met]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1424,"NC_007423.3",10569829,"SNV","T","C","Homozygous",22,22,100,1,11,12,0.48,38.91,23,23,13,15,null,1,1,"no","C/C","No",1,86.14,"XP_008197110.1:c.[1793-9361A>G]; XP_008197114.1:c.[1753+5849A>G]; XP_008197118.1:c.[1741+149A>G]; XP_015838057.1:c.[1795+2038A>G]; XP_008197112.1:c.[1786+8083A>G]; XP_008197121.1:c.[50A>G]; XP_008197116.1:c.[1747+3939A>G]; XP_008197111.1:c.[1789+8083A>G]; XP_008197115.1:c.[1747+2038A>G]","XP_008197121.1:p.Asn17Ser","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1425,"NC_007423.3","10573875..10573876","MNV","GC","AT","Homozygous",21,21,100,1,10,13,0.43,38.88,23,23,14,17,null,1,1,"no","AT/AT","No",1,200,"XP_008197110.1:c.[1792+8042_1792+8043delGCinsAT]; XP_008197111.1:c.[1789+4036_1789+4037delGCinsAT]; XP_008197112.1:c.[1786+4036_1786+4037delGCinsAT]; XP_008197114.1:c.[1753+1802_1753+1803delGCinsAT]; XP_008197116.1:c.[1639_1640delGCinsAT]","XP_008197116.1:p.Ala547Ile","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1426,"NC_007423.3",10591540,"SNV","T","C","Homozygous",21,21,100,1,11,10,0.48,36.29,21,21,13,15,null,1,1,"no","C/C","No",1,83.12,"XP_972898.1:c.1612A>G","XP_972898.1:p.Lys538Glu","LOC661655",661655,null,"661655 [Gene Symbol: LOC661655] [Locus Tag: TcasGA2_TC005617] [Chromosome: LG8] [Map Location: ] [Description: DNA mismatch repair protein Mlh1] [Gene Type: protein-coding]","TcasGA2_TC005617; LOC661655"]
[1428,"NC_007423.3",10613024,"SNV","G","A","Homozygous",22,22,100,1,11,13,0.46,35.45,24,24,13,14,null,1,1,"no","A/A","No",1,87.7,"XP_008197127.1:c.[4663G>A]; XP_008197125.1:c.[4663G>A]; XP_015838055.1:c.[4663G>A]","XP_008197127.1:p.[Ala1555Thr]; XP_008197125.1:p.[Ala1555Thr]; XP_015838055.1:p.[Ala1555Thr]","LOC661900",661900,null,"661900 [Gene Symbol: LOC661900] [Locus Tag: TcasGA2_TC006498] [Chromosome: LG8] [Map Location: ] [Description: WD repeat-containing protein 81] [Gene Type: protein-coding]","TcasGA2_TC006498; LOC661900"]
[1429,"NC_007423.3",10613048,"SNV","T","A","Homozygous",23,23,100,1,13,12,0.48,38.04,25,25,13,15,null,1,1,"no","A/A","No",1,90.72,"XP_008197127.1:c.[4687T>A]; XP_015838055.1:c.[4687T>A]; XP_008197125.1:c.[4687T>A]","XP_008197127.1:p.[Cys1563Ser]; XP_015838055.1:p.[Cys1563Ser]; XP_008197125.1:p.[Cys1563Ser]","LOC661900",661900,null,"661900 [Gene Symbol: LOC661900] [Locus Tag: TcasGA2_TC006498] [Chromosome: LG8] [Map Location: ] [Description: WD repeat-containing protein 81] [Gene Type: protein-coding]","TcasGA2_TC006498; LOC661900"]
[1431,"NC_007423.3",10638108,"SNV","G","C","Homozygous",22,22,100,1,15,10,0.4,38.32,25,25,15,18,null,1,1,"no","C/C","No",1,86.14,"XP_975851.1:c.[468C>G]; XP_966427.1:c.[519C>G]","XP_975851.1:p.[Phe156Leu]; XP_966427.1:p.[Phe173Leu]","LOC659433",659433,null,"659433 [Gene Symbol: LOC659433] [Locus Tag: TcasGA2_TC005611] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat domain-containing protein 40] [Gene Type: protein-coding]","TcasGA2_TC005611; LOC659433"]
[1432,"NC_007423.3",10638110,"SNV","A","G","Homozygous",22,22,100,1,14,10,0.42,37.77,24,24,15,18,null,1,1,"no","G/G","No",1,86.11,"XP_975851.1:c.[466T>C]; XP_966427.1:c.[517T>C]","XP_975851.1:p.[Phe156Leu]; XP_966427.1:p.[Phe173Leu]","LOC659433",659433,null,"659433 [Gene Symbol: LOC659433] [Locus Tag: TcasGA2_TC005611] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat domain-containing protein 40] [Gene Type: protein-coding]","TcasGA2_TC005611; LOC659433"]
[1433,"NC_007423.3","10641705..10641706","MNV","CG","GC","Heterozygous",8,21,38.1,1,3,5,0.38,39.06,8,26,4,8,null,0.25,0.84,"no","complex","No",1,200,"XP_973309.2:c.[366_367delCGinsGC]; XP_008197132.1:c.[276_277delCGinsGC]","XP_973309.2:p.[Val123Leu]; XP_008197132.1:p.[Val93Leu]","LOC662097",662097,null,"662097 [Gene Symbol: LOC662097] [Locus Tag: TcasGA2_TC006500] [Chromosome: LG8] [Map Location: ] [Description: nucleoside diphosphate-linked moiety X motif 6] [Gene Type: protein-coding]","TcasGA2_TC006500; LOC662097"]
[1435,"NC_007423.3","10649944..10649945","MNV","AC","GT","Homozygous",21,21,100,1,12,9,0.43,37.95,21,21,12,15,null,1,1,"no","GT/GT","No",1,200,"XP_015838058.1:c.[3964_3965delACinsGT]; XP_015838059.1:c.[3952_3953delACinsGT]; XP_015838060.1:c.[3838_3839delACinsGT]; XP_008197135.1:c.[3964_3965delACinsGT]","XP_015838058.1:p.[Thr1322Val]; XP_015838059.1:p.[Thr1318Val]; XP_015838060.1:p.[Thr1280Val]; XP_008197135.1:p.[Thr1322Val]","LOC662167",662167,null,"662167 [Gene Symbol: LOC662167] [Locus Tag: TcasGA2_TC006501] [Chromosome: LG8] [Map Location: ] [Description: E3 ubiquitin-protein ligase RBBP6] [Gene Type: protein-coding]","TcasGA2_TC006501; LOC662167"]
[1436,"NC_007423.3",10725578,"SNV","T","G","Heterozygous",10,31,32.26,1,6,5,0.45,37.2,11,32,5,6,-1.18,0.03,0.77,"no","G/T","No",1,54.5,"XP_015838072.1:c.[1318A>C]; XP_008197143.1:c.[2308-2409T>G]; XP_966958.1:c.[1522A>C]","XP_015838072.1:p.[Ile440Leu]; XP_966958.1:p.[Ile508Leu]","LOC662523, LOC660970","662523 , 660970",null,"662523 [Gene Symbol: LOC662523] [Locus Tag: TcasGA2_TC006507] [Chromosome: LG8] [Map Location: ] [Description: cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B] [Gene Type: protein-coding] || 660970 [Gene Symbol: LOC660970] [Locus Tag: TcasGA2_TC005601] [Chromosome: LG8] [Map Location: ] [Description: proline-rich extensin-like protein EPR1] [Gene Type: protein-coding]","TcasGA2_TC006507; LOC662523 || TcasGA2_TC005601; LOC660970"]
[1437,"NC_007423.3",10784526,"SNV","T","G","Homozygous",22,22,100,1,10,14,0.42,38.23,24,24,10,15,null,1,1,"no","G/G","No",1,86.11,"XP_008197146.1:c.[77T>G]; XP_015838069.1:c.[77T>G]; XP_015838070.1:c.[77T>G]","XP_008197146.1:p.[Val26Gly]; XP_015838069.1:p.[Val26Gly]; XP_015838070.1:p.[Val26Gly]","LOC662523",662523,null,"662523 [Gene Symbol: LOC662523] [Locus Tag: TcasGA2_TC006507] [Chromosome: LG8] [Map Location: ] [Description: cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B] [Gene Type: protein-coding]","TcasGA2_TC006507; LOC662523"]
[1439,"NC_007423.3",10974677,"SNV","T","C","Homozygous",20,20,100,1,5,17,0.23,37.4,22,22,13,14,null,1,1,"no","C/C","No",1,80.11,"XP_008196952.1:c.8T>C","XP_008196952.1:p.Val3Ala","LOC655008",655008,null,"655008 [Gene Symbol: LOC655008] [Locus Tag: TcasGA2_TC006523] [Chromosome: LG8] [Map Location: ] [Description: HEAT repeat-containing protein 6] [Gene Type: protein-coding]","LOC655008; TcasGA2_TC006523"]
[1440,"NC_007423.3",10976852,"SNV","G","A","Homozygous",25,25,100,1,9,18,0.33,38,27,27,9,16,null,1,1,"no","A/A","No",1,96.73,"XP_008196952.1:c.1681G>A","XP_008196952.1:p.Val561Ile","LOC655008",655008,null,"655008 [Gene Symbol: LOC655008] [Locus Tag: TcasGA2_TC006523] [Chromosome: LG8] [Map Location: ] [Description: HEAT repeat-containing protein 6] [Gene Type: protein-coding]","LOC655008; TcasGA2_TC006523"]
[1443,"NC_007423.3","11004028..11004029","MNV","GG","CA","Homozygous",26,26,100,1,11,15,0.42,38.75,26,26,16,17,null,1,1,"no","CA/CA","No",1,200,"XP_001807778.1:c.315_316delCCinsTG","XP_001807778.1:p.Leu106Val","LOC100142430",100142430,null,"100142430 [Gene Symbol: LOC100142430] [Locus Tag: TcasGA2_TC005585] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase alpha subunit B] [Gene Type: protein-coding]","TcasGA2_TC005585; LOC100142430"]
[1444,"NC_007423.3",11004034,"SNV","C","A","Homozygous",27,27,100,1,13,14,0.48,37.07,27,27,16,18,null,1,1,"no","A/A","No",1,102.74,"XP_001807778.1:c.310G>T","XP_001807778.1:p.Val104Phe","LOC100142430",100142430,null,"100142430 [Gene Symbol: LOC100142430] [Locus Tag: TcasGA2_TC005585] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase alpha subunit B] [Gene Type: protein-coding]","TcasGA2_TC005585; LOC100142430"]
[1445,"NC_007423.3",11004295,"SNV","A","T","Homozygous",22,22,100,1,6,20,0.23,37.23,26,26,11,11,null,1,1,"no","T/T","No",1,87.71,"XP_001807778.1:c.49T>A","XP_001807778.1:p.Ser17Thr","LOC100142430",100142430,null,"100142430 [Gene Symbol: LOC100142430] [Locus Tag: TcasGA2_TC005585] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase alpha subunit B] [Gene Type: protein-coding]","TcasGA2_TC005585; LOC100142430"]
[1446,"NC_007423.3","11011151..11011152","MNV","CC","GT","Homozygous",20,20,100,1,5,16,0.24,37.28,21,21,11,14,null,1,1,"no","GT/GT","No",1,200,"XP_008196911.1:c.[1689_1690delGGinsAC]; XP_015838191.1:c.[1716_1717delGGinsAC]; XP_015838190.1:c.[1716_1717delGGinsAC]","XP_008196911.1:p.[Ala564Pro]; XP_015838191.1:p.[Ala573Pro]; XP_015838190.1:p.[Ala573Pro]","LOC655543",655543,null,"655543 [Gene Symbol: LOC655543] [Locus Tag: TcasGA2_TC005584] [Chromosome: LG8] [Map Location: ] [Description: transcription elongation factor SPT6] [Gene Type: protein-coding]","TcasGA2_TC005584; LOC655543"]
[1447,"NC_007423.3",11055584,"SNV","C","T","Homozygous",21,21,100,1,12,15,0.44,37.81,27,27,15,14,null,1,1,"no","T/T","No",1,84.7,"XP_967759.1:c.862G>A","XP_967759.1:p.Val288Ile","LOC656117",656117,null,"656117 [Gene Symbol: LOC656117] [Locus Tag: TcasGA2_TC005581] [Chromosome: LG8] [Map Location: ] [Description: olfactory receptor 18] [Gene Type: protein-coding]","Or72; TcasGA2_TC005581; or18; LOC656117"]
[1448,"NC_007423.3",11055932,"SNV","A","G","Homozygous",19,20,95,1,7,15,0.32,39.26,22,23,10,12,null,1,1,"no","G/G","No",1,52.15,"XP_967759.1:c.560T>C","XP_967759.1:p.Ile187Thr","LOC656117",656117,null,"656117 [Gene Symbol: LOC656117] [Locus Tag: TcasGA2_TC005581] [Chromosome: LG8] [Map Location: ] [Description: olfactory receptor 18] [Gene Type: protein-coding]","Or72; TcasGA2_TC005581; or18; LOC656117"]
[1452,"NC_007423.3",11134216,"SNV","C","G","Homozygous",20,20,100,1,9,11,0.45,36.75,20,20,11,13,null,1,1,"no","G/G","No",1,80.09,"XP_968771.1:c.1282G>C","XP_968771.1:p.Ala428Pro","LOC657207",657207,null,"657207 [Gene Symbol: LOC657207] [Locus Tag: TcasGA2_TC005570] [Chromosome: LG8] [Map Location: ] [Description: peptidyl-prolyl cis-trans isomerase-like 4] [Gene Type: protein-coding]","LOC657207; TcasGA2_TC005570"]
[1453,"NC_007423.3",11134233,"SNV","C","T","Heterozygous",12,24,50,1,8,4,0.33,38.5,12,24,5,8,-1.07,0.64,0.9,"no","C/T","No",1,96.35,"XP_968771.1:c.1265G>A","XP_968771.1:p.Arg422Lys","LOC657207",657207,null,"657207 [Gene Symbol: LOC657207] [Locus Tag: TcasGA2_TC005570] [Chromosome: LG8] [Map Location: ] [Description: peptidyl-prolyl cis-trans isomerase-like 4] [Gene Type: protein-coding]","LOC657207; TcasGA2_TC005570"]
[1454,"NC_007423.3",11134255,"SNV","C","T","Heterozygous",11,25,44,1,4,7,0.36,38.82,11,25,5,5,1.23,0.31,0.93,"no","C/T","No",1,83.13,"XP_968771.1:c.1243G>A","XP_968771.1:p.Ala415Thr","LOC657207",657207,null,"657207 [Gene Symbol: LOC657207] [Locus Tag: TcasGA2_TC005570] [Chromosome: LG8] [Map Location: ] [Description: peptidyl-prolyl cis-trans isomerase-like 4] [Gene Type: protein-coding]","LOC657207; TcasGA2_TC005570"]
[1456,"NC_007423.3","11268035..11268036","MNV","GG","AC","Homozygous",23,23,100,1,12,13,0.48,37.35,25,25,12,16,null,1,1,"no","AC/AC","No",1,200,"XP_969351.1:c.303_304delGGinsAC","XP_969351.1:p.Glu102Gln","LOC657823",657823,null,"657823 [Gene Symbol: LOC657823] [Locus Tag: TcasGA2_TC006543] [Chromosome: LG8] [Map Location: ] [Description: pyruvate kinase] [Gene Type: protein-coding]","LOC657823; TcasGA2_TC006543"]
[1457,"NC_007423.3",11268907,"SNV","G","C","Heterozygous",12,27,44.44,1,9,3,0.25,38.67,12,33,5,7,1.1,0.18,0.89,"no","C/G","No",1,90.48,"XP_969351.1:c.1175G>C","XP_969351.1:p.Ser392Thr","LOC657823",657823,null,"657823 [Gene Symbol: LOC657823] [Locus Tag: TcasGA2_TC006543] [Chromosome: LG8] [Map Location: ] [Description: pyruvate kinase] [Gene Type: protein-coding]","LOC657823; TcasGA2_TC006543"]
[1459,"NC_007423.3",11314728,"SNV","C","T","Heterozygous",15,24,62.5,1,11,5,0.31,38.67,16,25,6,13,1.58,0.95,1,"no","C/T","No",1,61.82,"XP_969794.1:c.[2788C>T]; XP_008196931.1:c.[2788C>T]; XP_008196930.1:c.[2788C>T]","XP_969794.1:p.[Leu930Phe]; XP_008196931.1:p.[Leu930Phe]; XP_008196930.1:p.[Leu930Phe]","LOC658299",658299,null,"658299 [Gene Symbol: LOC658299] [Locus Tag: TcasGA2_TC006548] [Chromosome: LG8] [Map Location: ] [Description: regulatory-associated protein of mTOR] [Gene Type: protein-coding]","TcasGA2_TC006548; LOC658299"]
[1460,"NC_007423.3",11319637,"SNV","T","C","Homozygous",20,20,100,1,15,9,0.38,36.45,24,24,11,10,null,1,1,"no","C/C","No",1,80.12,"XP_008196932.1:c.628A>G","XP_008196932.1:p.Thr210Ala","LOC658372",658372,null,"658372 [Gene Symbol: LOC658372] [Locus Tag: TcasGA2_TC005562] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter] [Gene Type: protein-coding]","TcasGA2_TC005562; LOC658372"]
[1461,"NC_007423.3",11320290,"SNV","A","G","Homozygous",26,26,100,1,21,5,0.19,39.42,26,26,9,20,null,1,1,"no","G/G","No",1,98.15,"XP_008196932.1:c.22T>C","XP_008196932.1:p.Ser8Pro","LOC658372",658372,null,"658372 [Gene Symbol: LOC658372] [Locus Tag: TcasGA2_TC005562] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter] [Gene Type: protein-coding]","TcasGA2_TC005562; LOC658372"]
[1462,"NC_007423.3",11403707,"SNV","G","C","Homozygous",22,22,100,1,12,11,0.48,38.77,23,23,10,13,null,1,1,"no","C/C","No",1,86.13,"XP_008196946.1:c.683C>G","XP_008196946.1:p.Ala228Gly","LOC660251, LOC659804","660251 , 659804",null,"660251 [Gene Symbol: LOC660251] [Locus Tag: TcasGA2_TC006562] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660251] [Gene Type: protein-coding] || 659804 [Gene Symbol: LOC659804] [Locus Tag: TcasGA2_TC005552] [Chromosome: LG8] [Map Location: ] [Description: WW domain-binding protein 2] [Gene Type: protein-coding]","LOC660251; TcasGA2_TC006562 || LOC659804; TcasGA2_TC005552"]
[1463,"NC_007423.3",11407313,"SNV","C","T","Homozygous",20,20,100,1,6,15,0.29,35.2,21,21,12,12,null,1,1,"no","T/T","No",1,81.7,"XP_971233.1:c.205G>A","XP_971233.1:p.Ala69Thr","LOC660251, LOC659873","660251 , 659873",null,"660251 [Gene Symbol: LOC660251] [Locus Tag: TcasGA2_TC006562] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660251] [Gene Type: protein-coding] || 659873 [Gene Symbol: LOC659873] [Locus Tag: TcasGA2_TC005551] [Chromosome: LG8] [Map Location: ] [Description: cell cycle checkpoint protein RAD17] [Gene Type: protein-coding]","LOC660251; TcasGA2_TC006562 || TcasGA2_TC005551; LOC659873"]
[1464,"NC_007423.3",11436707,"SNV","C","G","Homozygous",25,25,100,1,18,10,0.36,37.6,28,28,16,19,null,1,1,"no","G/G","No",1,92.12,"XP_015838198.1:c.[1563C>G]; XP_015838197.1:c.[1563C>G]; XP_015838199.1:c.[1560C>G]; XP_008196948.1:c.[1362C>G]","XP_015838198.1:p.[Ile521Met]; XP_015838197.1:p.[Ile521Met]; XP_015838199.1:p.[Ile520Met]; XP_008196948.1:p.[Ile454Met]","LOC660251",660251,null,"660251 [Gene Symbol: LOC660251] [Locus Tag: TcasGA2_TC006562] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660251] [Gene Type: protein-coding]","LOC660251; TcasGA2_TC006562"]
[1467,"NC_007423.3",11438462,"SNV","A","G","Heterozygous",12,23,52.17,1,10,2,0.17,39.75,12,27,6,8,2.71,0.11,0.71,"no","A/G","No",1,88.82,"XP_008196951.1:c.137A>G","XP_008196951.1:p.Tyr46Cys","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1468,"NC_007423.3",11438470,"SNV","G","A","Heterozygous",13,23,56.52,1,11,2,0.15,39.31,13,26,7,9,2.91,0.12,0.6,"no","A/G","No",1,77.24,"XP_008196951.1:c.145G>A","XP_008196951.1:p.Asp49Asn","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1471,"NC_007423.3",11438871,"SNV","A","C","Heterozygous",8,21,38.1,1,5,4,0.44,37.75,9,24,5,4,-0.14,0.62,0.96,"no","A/C","No",1,57,"XP_008196951.1:c.546A>C","XP_008196951.1:p.Leu182Phe","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1473,"NC_007423.3",11439128,"SNV","A","G","Homozygous",34,34,100,1,20,17,0.46,38.91,37,37,17,24,null,1,1,"no","G/G","No",1,122.22,"XP_008196951.1:c.803A>G","XP_008196951.1:p.Asn268Ser","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1474,"NC_007423.3",11439182,"SNV","C","G","Heterozygous",16,26,61.54,1,9,7,0.44,37,16,28,11,9,-1.03,0.63,0.89,"no","C/G","No",1,67.73,"XP_008196951.1:c.857C>G","XP_008196951.1:p.Ala286Gly","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1475,"NC_007423.3",11439189,"SNV","C","G","Heterozygous",17,26,65.38,1,9,9,0.5,36.47,18,29,11,10,-0.24,0.8,0.89,"no","C/G","No",1,54.95,"XP_008196951.1:c.864C>G","XP_008196951.1:p.Asn288Lys","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1476,"NC_007423.3","11439210..11439211","MNV","GT","CC","Heterozygous",17,27,62.96,1,8,11,0.42,38.71,19,29,13,13,1.77,0.9,0.86,"no","complex","No",1,200,"XP_008196951.1:c.885_886delGTinsCC","XP_008196951.1:p.Tyr296His","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1477,"NC_007423.3",11439461,"SNV","A","G","Heterozygous",10,24,41.67,1,1,10,0.09,35.6,11,26,5,6,-2.78,0.26,0.4,"no","A/G","No",1,74.44,"XP_008196951.1:c.1136A>G","XP_008196951.1:p.Asn379Ser","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1478,"NC_007423.3",11439465,"SNV","G","C","Heterozygous",10,25,40,1,1,10,0.09,35.7,11,27,5,6,-2.47,0.13,0.33,"no","C/G","No",1,70.48,"XP_008196951.1:c.1140G>C","XP_008196951.1:p.Arg380Ser","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1479,"NC_007423.3",11439467,"SNV","A","C","Heterozygous",10,23,43.48,1,1,10,0.09,36.2,11,25,5,6,-2.17,0.19,0.36,"no","A/C","No",1,76.93,"XP_008196951.1:c.1142A>C","XP_008196951.1:p.Asp381Ala","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1480,"NC_007423.3",11439481,"SNV","T","C","Heterozygous",14,23,60.87,1,10,6,0.38,38.36,16,25,9,10,0.03,0.62,0.55,"no","C/T","No",1,63.34,"XP_008196951.1:c.1156T>C","XP_008196951.1:p.Phe386Leu","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1481,"NC_007423.3",11441233,"SNV","C","G","Homozygous",23,23,100,1,17,9,0.35,38.74,26,26,14,17,null,1,1,"no","G/G","No",1,89.12,"XP_008196951.1:c.2908C>G","XP_008196951.1:p.Pro970Ala","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1482,"NC_007423.3",11452317,"SNV","T","C","Homozygous",21,21,100,1,7,14,0.33,37.05,21,21,11,13,null,1,1,"no","C/C","No",1,83.12,"XP_971760.1:c.373T>C","XP_971760.1:p.Ser125Pro","LOC660436",660436,null,"660436 [Gene Symbol: LOC660436] [Locus Tag: TcasGA2_TC006566] [Chromosome: LG8] [Map Location: ] [Description: cytidine deaminase] [Gene Type: protein-coding]","LOC660436; TcasGA2_TC006566"]
[1485,"NC_007423.3",11732931,"SNV","T","C","Homozygous",24,24,100,1,16,11,0.41,38.88,27,27,14,13,null,1,1,"no","C/C","No",1,92.14,"XP_008196971.1:c.2284A>G","XP_008196971.1:p.Thr762Ala","LOC662098",662098,null,"662098 [Gene Symbol: LOC662098] [Locus Tag: TcasGA2_TC005530] [Chromosome: LG8] [Map Location: ] [Description: ATPase family AAA domain-containing protein 5] [Gene Type: protein-coding]","TcasGA2_TC005530; LOC662098"]
[1487,"NC_007423.3","11735212..11735213","MNV","TG","GA","Heterozygous",6,22,27.27,1,5,1,0.17,39.92,6,22,3,5,1.25,0.25,0.35,"no","complex","No",1,200,"XP_008196971.1:c.57_58delCAinsTC","XP_008196971.1:p.Asn20His","LOC662098",662098,null,"662098 [Gene Symbol: LOC662098] [Locus Tag: TcasGA2_TC005530] [Chromosome: LG8] [Map Location: ] [Description: ATPase family AAA domain-containing protein 5] [Gene Type: protein-coding]","TcasGA2_TC005530; LOC662098"]
[1488,"NC_007423.3",11741483,"SNV","A","G","Homozygous",24,24,100,1,19,8,0.3,37.79,27,27,15,18,null,1,1,"no","G/G","No",1,92.13,"XP_973378.1:c.139T>C","XP_973378.1:p.Tyr47His","LOC662168",662168,null,"662168 [Gene Symbol: LOC662168] [Locus Tag: TcasGA2_TC005528] [Chromosome: LG8] [Map Location: ] [Description: heat shock protein 27] [Gene Type: protein-coding]","LOC662168; TcasGA2_TC005528"]
[1492,"NC_007423.3",12092967,"SNV","T","C","Homozygous",21,21,100,1,6,17,0.26,37.52,23,23,12,15,null,1,1,"no","C/C","No",1,83.13,"XP_015838352.1:c.[859A>G]; XP_015838358.1:c.[392-4640T>C]","XP_015838352.1:p.Asn287Asp","LOC103314078, LOC103314076, LOC655790","103314078 , 103314076 , 655790",null,"103314078 [Gene Symbol: LOC103314078] [Locus Tag: TcasGA2_TC006627] [Chromosome: LG8] [Map Location: ] [Description: replication factor C subunit 5] [Gene Type: protein-coding] || 103314076 [Gene Symbol: LOC103314076] [Locus Tag: TcasGA2_TC005500] [Chromosome: LG8] [Map Location: ] [Description: carboxypeptidase M] [Gene Type: protein-coding] || 655790 [Gene Symbol: LOC655790] [Locus Tag: TcasGA2_TC005499] [Chromosome: LG8] [Map Location: ] [Description: esterase B1] [Gene Type: protein-coding]","LOC103314078; TcasGA2_TC006627 || LOC103314076; TcasGA2_TC005500 || LOC655790; TcasGA2_TC005499"]
[1493,"NC_007423.3",12148634,"SNV","C","A","Homozygous",22,22,100,1,6,16,0.27,38.82,22,22,13,17,null,1,1,"no","A/A","No",1,87.7,"XP_015838376.1:c.[1347C>A]; XP_008197191.1:c.[1500C>A]; XP_001809051.1:c.[1416C>A]","XP_015838376.1:p.[Asp449Glu]; XP_008197191.1:p.[Asp500Glu]; XP_001809051.1:p.[Asp472Glu]","LOC100142465",100142465,null,"100142465 [Gene Symbol: LOC100142465] [Locus Tag: TcasGA2_TC006631] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC100142465; TcasGA2_TC006631"]
[1494,"NC_007423.3",12153220,"SNV","T","C","Homozygous",23,23,100,1,14,13,0.48,37.35,27,27,13,17,null,1,1,"no","C/C","No",1,89.14,"XP_015838377.1:c.[871A>G]; XP_008197194.1:c.[874A>G]; XP_015838378.1:c.[835A>G]","XP_015838377.1:p.[Ile291Val]; XP_008197194.1:p.[Ile292Val]; XP_015838378.1:p.[Ile279Val]","LOC656872",656872,null,"656872 [Gene Symbol: LOC656872] [Locus Tag: TcasGA2_TC005491] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC656872; TcasGA2_TC005491"]
[1495,"NC_007423.3",12153315,"SNV","A","C","Heterozygous",10,21,47.62,1,6,4,0.4,37.7,10,21,4,5,0.25,0.8,1,"no","A/C","No",1,81.96,"XP_015838378.1:c.[749-9T>G]; XP_008197194.1:c.[779T>G]; XP_015838377.1:c.[776T>G]","XP_008197194.1:p.[Val260Gly]; XP_015838377.1:p.[Val259Gly]","LOC656872",656872,null,"656872 [Gene Symbol: LOC656872] [Locus Tag: TcasGA2_TC005491] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC656872; TcasGA2_TC005491"]
[1496,"NC_007423.3",12153323,"SNV","A","T","Heterozygous",10,22,45.45,1,6,4,0.4,37.2,10,22,6,6,0.4,0.35,1,"no","A/T","No",1,78.98,"XP_015838377.1:c.[768T>A]; XP_015838378.1:c.[749-17T>A]; XP_008197194.1:c.[771T>A]","XP_015838377.1:p.[Cys256*]; XP_008197194.1:p.[Cys257*]","LOC656872",656872,null,"656872 [Gene Symbol: LOC656872] [Locus Tag: TcasGA2_TC005491] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC656872; TcasGA2_TC005491"]
[1497,"NC_007423.3",12153334,"SNV","G","T","Heterozygous",9,20,45,1,6,3,0.33,38.22,9,20,5,5,-0.8,0.1,0.84,"no","G/T","No",1,68.34,"XP_015838378.1:c.[748+12C>A]; XP_015838377.1:c.[757C>A]; XP_008197194.1:c.[760C>A]","XP_015838377.1:p.[Arg253Ser]; XP_008197194.1:p.[Arg254Ser]","LOC656872",656872,null,"656872 [Gene Symbol: LOC656872] [Locus Tag: TcasGA2_TC005491] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC656872; TcasGA2_TC005491"]
[1498,"NC_007423.3",12164366,"SNV","T","C","Homozygous",21,21,100,1,17,7,0.29,38.71,24,24,10,17,null,1,1,"no","C/C","No",1,83.12,"XP_968772.1:c.37T>C","XP_968772.1:p.Ser13Pro","LOC657120, LOC657208","657120 , 657208",null,"657120 [Gene Symbol: LOC657120] [Locus Tag: TcasGA2_TC005490] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding] || 657208 [Gene Symbol: LOC657208] [Locus Tag: TcasGA2_TC006634] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC657120; TcasGA2_TC005490 || LOC657208; TcasGA2_TC006634"]
[1499,"NC_007423.3",12164405,"SNV","C","T","Heterozygous",8,22,36.36,1,2,7,0.22,36.5,9,23,5,7,2.08,0.4,0.68,"no","C/T","No",1,53.39,"XP_968772.1:c.76C>T","XP_968772.1:p.His26Tyr","LOC657120, LOC657208","657120 , 657208",null,"657120 [Gene Symbol: LOC657120] [Locus Tag: TcasGA2_TC005490] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding] || 657208 [Gene Symbol: LOC657208] [Locus Tag: TcasGA2_TC006634] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC657120; TcasGA2_TC005490 || LOC657208; TcasGA2_TC006634"]
[1501,"NC_007423.3",12785539,"SNV","C","G","Homozygous",23,23,100,1,7,17,0.29,38.57,24,24,11,17,null,1,1,"no","G/G","No",1,89.12,"XP_015838373.1:c.[2640G>C]; XP_015838370.1:c.[2637G>C]; XP_015838367.1:c.[2640G>C]; XP_015838371.1:c.[2589G>C]; XP_015838369.1:c.[2640G>C]; XP_008197261.1:c.[2616G>C]; XP_015838372.1:c.[2586G>C]","XP_015838373.1:p.[Lys880Asn]; XP_015838370.1:p.[Lys879Asn]; XP_015838367.1:p.[Lys880Asn]; XP_015838371.1:p.[Lys863Asn]; XP_015838369.1:p.[Lys880Asn]; XP_008197261.1:p.[Lys872Asn]; XP_015838372.1:p.[Lys862Asn]","LOC661858",661858,null,"661858 [Gene Symbol: LOC661858] [Locus Tag: TcasGA2_TC005459] [Chromosome: LG8] [Map Location: ] [Description: prominin-like protein] [Gene Type: protein-coding]","LOC661858; TcasGA2_TC005459"]
[1503,"NC_007423.3",12845660,"SNV","G","A","Heterozygous",8,20,40,1,4,5,0.44,39.25,9,21,6,6,-0.42,0.82,1,"no","A/G","No",1,59.03,"XP_015838318.1:c.3122G>A","XP_015838318.1:p.Ser1041Asn","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1504,"NC_007423.3",12846184,"SNV","C","T","Heterozygous",13,23,56.52,1,8,7,0.47,38.54,15,25,9,8,-0.25,0.86,0.87,"no","C/T","No",1,77.38,"XP_015838318.1:c.3646C>T","XP_015838318.1:p.Leu1216Phe","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1505,"NC_007423.3","12846191..12846193","MNV","CCA","AGG","Heterozygous",13,23,56.52,1,8,7,0.47,38,15,25,11,9,0.08,0.85,0.87,"no","complex","No",1,200,"XP_015838318.1:c.3653_3655delCCAinsAGG","XP_015838318.1:p.Thr1218_Ser1219delinsLysGly","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1506,"NC_007423.3",12848041,"SNV","A","G","Heterozygous",15,24,62.5,1,12,7,0.37,37,19,28,6,8,-1.22,0.85,1,"no","A/G","No",1,60.68,"XP_015838318.1:c.4570A>G","XP_015838318.1:p.Ser1524Gly","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1507,"NC_007423.3",12848072,"SNV","A","T","Heterozygous",11,22,50,1,7,6,0.46,37,13,24,6,6,0.16,0.36,0.98,"no","A/T","No",1,88.68,"XP_015838318.1:c.4601A>T","XP_015838318.1:p.Glu1534Val","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1508,"NC_007423.3",12848078,"SNV","C","G","Homozygous",23,23,100,1,12,14,0.46,36.74,26,26,12,15,null,1,1,"no","G/G","No",1,89.12,"XP_015838318.1:c.4607C>G","XP_015838318.1:p.Pro1536Arg","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1510,"NC_007423.3","12848327..12848328","MNV","GC","CT","Heterozygous",16,24,66.67,1,12,9,0.43,37.09,21,30,13,11,-0.97,0.74,0.99,"no","complex","No",1,200,"XP_015838318.1:c.4856_4857delGCinsCT","XP_015838318.1:p.Gly1619Ala","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1511,"NC_007423.3",12848332,"SNV","T","A","Homozygous",24,24,100,1,14,15,0.48,35.92,29,29,15,14,null,1,1,"no","A/A","No",1,93.71,"XP_015838318.1:c.4861T>A","XP_015838318.1:p.Tyr1621Asn","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1512,"NC_007423.3",12850114,"SNV","G","A","Heterozygous",12,31,38.71,1,4,8,0.33,39.42,12,33,4,8,2.51,0.53,0.41,"no","A/G","No",1,79.39,"XP_015838318.1:c.6643G>A","XP_015838318.1:p.Glu2215Lys","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1513,"NC_007423.3","12899500..12899501","MNV","CT","TG","Homozygous",18,21,85.71,1,18,0,0,37.78,18,21,10,11,null,0.8,0.68,"no","TG/TG","No",1,200,"XP_973645.1:c.[408_409delCTinsTG]; XP_008197270.1:c.[408_409delCTinsTG]","XP_973645.1:p.[Leu137Val]; XP_008197270.1:p.[Leu137Val]","LOC662458",662458,null,"662458 [Gene Symbol: LOC662458] [Locus Tag: TcasGA2_TC006689] [Chromosome: LG8] [Map Location: ] [Description: sesquipedalian-1] [Gene Type: protein-coding]","LOC662458; TcasGA2_TC006689"]
[1517,"NC_007423.3",13149390,"SNV","T","C","Heterozygous",8,22,36.36,1,0,8,0,36.5,8,23,3,2,-0.61,0.15,0.29,"no","C/T","No",1,54.66,"XP_974236.1:c.761T>C","XP_974236.1:p.Phe254Ser","LOC663082",663082,null,"663082 [Gene Symbol: LOC663082] [Locus Tag: TcasGA2_TC006708] [Chromosome: LG8] [Map Location: ] [Description: ATP-sensitive inward rectifier potassium channel 11] [Gene Type: protein-coding]","TcasGA2_TC006708; LOC663082"]
[1518,"NC_007423.3",13155949,"SNV","C","T","Heterozygous",8,20,40,1,5,3,0.38,36,8,21,5,4,-2.31,0.63,0.96,"no","C/T","No",1,58.95,"XP_974289.1:c.650G>A","XP_974289.1:p.Ser217Asn","LOC663136",663136,null,"663136 [Gene Symbol: LOC663136] [Locus Tag: TcasGA2_TC005442] [Chromosome: LG8] [Map Location: ] [Description: putative inorganic phosphate cotransporter] [Gene Type: protein-coding]","TcasGA2_TC005442; LOC663136"]
[1519,"NC_007423.3",13158474,"SNV","T","C","Heterozygous",8,20,40,1,8,0,0,38.12,8,23,5,5,0.19,0.48,0.53,"no","C/T","No",1,60.19,"XP_015838419.1:c.334A>G","XP_015838419.1:p.Ile112Val","LOC663162",663162,null,"663162 [Gene Symbol: LOC663162] [Locus Tag: TcasGA2_TC005441] [Chromosome: LG8] [Map Location: ] [Description: putative inorganic phosphate cotransporter] [Gene Type: protein-coding]","LOC663162; TcasGA2_TC005441"]
[1521,"NC_007423.3",13221041,"SNV","G","C","Heterozygous",10,24,41.67,1,7,4,0.36,37.1,11,31,5,8,0.97,0.27,0.96,"no","C/G","No",1,73.3,"XP_015838504.1:c.[878C>G]; XP_015838508.1:c.[13-2896G>C]","XP_015838504.1:p.Ala293Gly","LOC655221, LOC655077","655221 , 655077",null,"655221 [Gene Symbol: LOC655221] [Locus Tag: TcasGA2_TC006713] [Chromosome: LG8] [Map Location: ] [Description: protein yippee-like 2] [Gene Type: protein-coding] || 655077 [Gene Symbol: LOC655077] [Locus Tag: TcasGA2_TC005432] [Chromosome: LG8] [Map Location: ] [Description: cathepsin B precursor] [Gene Type: protein-coding]","LOC655221; TcasGA2_TC006713 || LOC655077; TcasGA2_TC005432"]
[1522,"NC_007423.3",13241221,"SNV","T","G","Homozygous",26,26,100,1,14,15,0.48,37.92,29,29,9,17,null,1,1,"no","G/G","No",1,98.15,"XP_015838506.1:c.[164A>C]; XP_015838507.1:c.[164A>C]","XP_015838506.1:p.[Gln55Pro]; XP_015838507.1:p.[Gln55Pro]","LOC107398576",107398576,null,"107398576 [Gene Symbol: LOC107398576] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398576] [Gene Type: protein-coding]","LOC107398576"]
[1523,"NC_007423.3",13241231,"SNV","C","G","Heterozygous",18,36,50,1,11,10,0.48,37.5,21,41,7,13,0.95,0.89,0.99,"no","C/G","No",1,139.05,"XP_015838506.1:c.[154G>C]; XP_015838507.1:c.[154G>C]","XP_015838506.1:p.[Glu52Gln]; XP_015838507.1:p.[Glu52Gln]","LOC107398576",107398576,null,"107398576 [Gene Symbol: LOC107398576] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398576] [Gene Type: protein-coding]","LOC107398576"]
[1524,"NC_007423.3",13241237,"SNV","G","C","Heterozygous",18,33,54.55,1,11,10,0.48,38.28,21,39,7,13,0.85,0.9,1,"no","C/G","No",1,112.16,"XP_015838507.1:c.[148C>G]; XP_015838506.1:c.[148C>G]","XP_015838507.1:p.[Gln50Glu]; XP_015838506.1:p.[Gln50Glu]","LOC107398576",107398576,null,"107398576 [Gene Symbol: LOC107398576] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398576] [Gene Type: protein-coding]","LOC107398576"]
[1526,"NC_007423.3","13349798..13349799","MNV","GA","AG","Heterozygous",16,20,80,1,13,4,0.24,38.88,17,22,9,13,1.94,0.45,1,"no","complex","No",1,200,"XP_015838445.1:c.1819_1820delGAinsAG","XP_015838445.1:p.Glu607Arg","LOC656371",656371,null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721"]
[1527,"NC_007423.3",13349852,"SNV","A","G","Homozygous",27,27,100,1,16,16,0.5,37.59,32,32,13,17,null,1,1,"no","G/G","No",1,101.16,"XP_015838445.1:c.1873A>G","XP_015838445.1:p.Lys625Glu","LOC656371",656371,null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721"]
[1528,"NC_007423.3",13349867,"SNV","G","A","Heterozygous",18,29,62.07,1,7,13,0.35,39.17,20,32,8,10,2.16,1,0.99,"no","A/G","No",1,73.29,"XP_015838445.1:c.1888G>A","XP_015838445.1:p.Glu630Lys","LOC656371",656371,null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721"]
[1532,"NC_007423.3","13424634^13424635","Insertion","-","AG","Homozygous",20,20,100,1,12,11,0.48,37.45,23,23,13,14,null,1,1,"no","AG/AG","No",1,200,"XP_015838512.1:c.3366_3367insAG","XP_015838512.1:p.Leu1123fs","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1533,"NC_007423.3","13424637..13424638","MNV","GC","CA","Homozygous",21,21,100,1,13,11,0.46,36.71,24,24,14,14,null,1,1,"no","CA/CA","No",1,200,"XP_015838512.1:c.3369_3370delGCinsCA","XP_015838512.1:p.Leu1123_Pro1124delinsPheThr","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1534,"NC_007423.3",13425601,"SNV","A","G","Homozygous",33,33,100,1,20,19,0.49,37.58,39,39,19,24,null,1,1,"no","G/G","No",1,116.2,"XP_015838512.1:c.4333A>G","XP_015838512.1:p.Asn1445Asp","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1537,"NC_007423.3",13430940,"SNV","G","C","Homozygous",25,25,100,1,18,12,0.4,38.88,30,30,13,17,null,1,1,"no","C/C","No",1,92.15,"XP_015838512.1:c.9464G>C","XP_015838512.1:p.Ser3155Thr","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1538,"NC_007423.3",13430946,"SNV","A","G","Homozygous",25,25,100,1,15,15,0.5,38.48,30,30,13,17,null,1,1,"no","G/G","No",1,95.14,"XP_015838512.1:c.9470A>G","XP_015838512.1:p.Gln3157Arg","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1539,"NC_007423.3",13431132,"SNV","T","C","Homozygous",20,20,100,1,9,11,0.45,37.05,20,20,13,17,null,1,1,"no","C/C","No",1,80.11,"XP_015838512.1:c.9656T>C","XP_015838512.1:p.Leu3219Pro","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1540,"NC_007423.3",13433004,"SNV","G","A","Heterozygous",9,24,37.5,1,3,6,0.33,37.11,9,26,6,8,-1.61,0.58,0.82,"no","A/G","No",1,60.72,"XP_015838512.1:c.11528G>A","XP_015838512.1:p.Gly3843Glu","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1541,"NC_007423.3",13433034,"SNV","C","T","Homozygous",20,20,100,1,9,12,0.43,37.9,21,21,12,15,null,1,1,"no","T/T","No",1,81.69,"XP_015838512.1:c.11558C>T","XP_015838512.1:p.Thr3853Ile","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1543,"NC_007423.3",13436812,"SNV","T","C","Homozygous",27,27,100,1,7,24,0.23,38.04,31,31,13,17,null,1,1,"no","C/C","No",1,101.18,"XP_015838512.1:c.15101T>C","XP_015838512.1:p.Val5034Ala","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1544,"NC_007423.3",13454682,"SNV","G","A","Homozygous",22,22,100,1,15,9,0.38,38.32,24,24,10,14,null,1,1,"no","A/A","No",1,87.7,"XP_968843.1:c.347C>T","XP_968843.1:p.Thr116Ile","LOC657282",657282,null,"657282 [Gene Symbol: LOC657282] [Locus Tag: TcasGA2_TC005420] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat domain-containing protein 27] [Gene Type: protein-coding]","TcasGA2_TC005420; LOC657282"]
[1545,"NC_007423.3",13478650,"SNV","G","A","Homozygous",20,20,100,1,6,16,0.27,35.85,22,22,9,11,null,1,1,"no","A/A","No",1,81.69,"XP_001810958.1:c.1138C>T","XP_001810958.1:p.Pro380Ser","LOC657358",657358,null,"657358 [Gene Symbol: LOC657358] [Locus Tag: TcasGA2_TC005418] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657358] [Gene Type: protein-coding]","LOC657358; TcasGA2_TC005418"]
[1547,"NC_007423.3","13516699..13516700","MNV","TC","GT","Homozygous",25,25,100,1,14,14,0.5,38.29,28,28,13,18,null,1,1,"no","GT/GT","No",1,200,"XP_969353.1:c.1215_1216delGAinsAC","XP_969353.1:p.Lys406Gln","LOC657825",657825,null,"657825 [Gene Symbol: LOC657825] [Locus Tag: TcasGA2_TC005412] [Chromosome: LG8] [Map Location: ] [Description: beta-glucuronidase] [Gene Type: protein-coding]","LOC657825; TcasGA2_TC005412"]
[1548,"NC_007423.3",13580666,"SNV","C","G","Heterozygous",8,20,40,1,5,3,0.38,39,8,20,2,7,-1.16,0.31,0.83,"no","C/G","No",1,58.92,"NP_001104011.1:c.1034G>C","NP_001104011.1:p.Gly345Ala","Cda3",658524,"chitin deacetylase 3","658524 [Gene Symbol: Cda3] [Locus Tag: TcasGA2_TC005409] [Chromosome: LG8] [Map Location: ] [Description: chitin deacetylase 3] [Gene Type: protein-coding]","Cda3; TcasGA2_TC005409"]
[1550,"NC_007423.3","13687911..13687912","MNV","GT","AA","Homozygous",20,20,100,1,13,8,0.38,36.95,21,21,12,15,null,1,1,"no","AA/AA","No",1,200,"XP_970680.1:c.779_780delGTinsAA","XP_970680.1:p.Ser260Lys","LOC659262",659262,null,"659262 [Gene Symbol: LOC659262] [Locus Tag: TcasGA2_TC006746] [Chromosome: LG8] [Map Location: ] [Description: deoxyhypusine hydroxylase] [Gene Type: protein-coding]","TcasGA2_TC006746; LOC659262"]
[1551,"NC_007423.3","13719752..13719753","MNV","AA","TG","Homozygous",17,20,85,1,2,15,0.12,38.35,17,20,10,10,null,0.92,1,"no","TG/TG","No",1,200,"XP_971048.1:c.920_921delAAinsTG","XP_971048.1:p.Gln307Leu","LOC659669",659669,null,"659669 [Gene Symbol: LOC659669] [Locus Tag: TcasGA2_TC006751] [Chromosome: LG8] [Map Location: ] [Description: protein penguin] [Gene Type: protein-coding]","LOC659669; TcasGA2_TC006751"]
[1552,"NC_007423.3",13722252,"SNV","T","G","Homozygous",22,22,100,1,13,17,0.43,36.36,30,30,7,14,null,1,1,"no","G/G","No",1,86.11,"XP_971109.1:c.413A>C","XP_971109.1:p.Asn138Thr","LOC659739",659739,null,"659739 [Gene Symbol: LOC659739] [Locus Tag: TcasGA2_TC005401] [Chromosome: LG8] [Map Location: ] [Description: synaptogyrin-1] [Gene Type: protein-coding]","LOC659739; TcasGA2_TC005401"]
[1554,"NC_007423.3",13806581,"SNV","A","G","Homozygous",26,26,100,1,17,13,0.43,36.73,30,30,13,17,null,1,1,"no","G/G","No",1,98.14,"XP_015838457.1:c.1339T>C","XP_015838457.1:p.Cys447Arg","LOC660438",660438,null,"660438 [Gene Symbol: LOC660438] [Locus Tag: TcasGA2_TC005396] [Chromosome: LG8] [Map Location: ] [Description: dynein assembly factor 5, axonemal] [Gene Type: protein-coding]","TcasGA2_TC005396; LOC660438"]
[1555,"NC_007423.3",13806593,"SNV","G","A","Homozygous",25,25,100,1,16,11,0.41,37.6,27,27,13,18,null,1,1,"no","A/A","No",1,96.73,"XP_015838457.1:c.1327C>T","XP_015838457.1:p.His443Tyr","LOC660438",660438,null,"660438 [Gene Symbol: LOC660438] [Locus Tag: TcasGA2_TC005396] [Chromosome: LG8] [Map Location: ] [Description: dynein assembly factor 5, axonemal] [Gene Type: protein-coding]","TcasGA2_TC005396; LOC660438"]
[1558,"NC_007423.3","13914766..13914771","Deletion","AATGAC","-","Heterozygous",14,24,58.33,1,5,11,0.31,37.43,16,26,8,8,1.05,0.76,0.68,"no","complex","No",1,200,"XP_008197522.1:c.[529_534delAATGAC]; XP_015838497.1:c.[117-10254_117-10249delGTCATT]; XP_015838498.1:c.[117-10254_117-10249delGTCATT]; XP_015838499.1:c.[117-10254_117-10249delGTCATT]; XP_015838501.1:c.[117-10254_117-10249delGTCATT]; XP_015838500.1:c.[117-10254_117-10249delGTCATT]","XP_008197522.1:p.Asn177_Asp178del","LOC661343, LOC103314157","661343 , 103314157",null,"661343 [Gene Symbol: LOC661343] [Locus Tag: TcasGA2_TC005383] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat and fibronectin type-III domain-containing protein 1] [Gene Type: protein-coding] || 103314157 [Gene Symbol: LOC103314157] [Locus Tag: TcasGA2_TC006768] [Chromosome: LG8] [Map Location: ] [Description: protein CROWDED NUCLEI 2] [Gene Type: protein-coding]","LOC661343; TcasGA2_TC005383 || LOC103314157; TcasGA2_TC006768"]
[1560,"NC_007423.3",13972005,"SNV","C","T","Homozygous",22,22,100,1,9,14,0.39,37.45,23,23,15,13,null,1,1,"no","T/T","No",1,87.72,"XP_015838539.1:c.[361C>T]; XP_015838540.1:c.[361C>T]","XP_015838539.1:p.[Leu121Phe]; XP_015838540.1:p.[Leu121Phe]","LOC107398578",107398578,null,"107398578 [Gene Symbol: LOC107398578] [Locus Tag: TcasGA2_TC006770] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398578] [Gene Type: protein-coding]","TcasGA2_TC006770; LOC107398578; Or229"]
[1561,"NC_007423.3",14145383,"SNV","C","T","Homozygous",22,22,100,1,17,7,0.29,38.64,24,24,11,14,null,1,1,"no","T/T","No",1,87.71,"XP_015838484.1:c.[267-2267G>A]; XP_015838492.1:c.[1119+5441G>A]; XP_015838486.1:c.[1522C>T]; XP_015838485.1:c.[267-2267G>A]; XP_008197523.2:c.[1528C>T]; XP_008197435.1:c.[267-2267G>A]; XP_015838483.1:c.[267-2267G>A]","XP_015838486.1:p.[Pro508Ser]; XP_008197523.2:p.[Pro510Ser]","LOC662422, LOC100142582, LOC103314138","662422 , 100142582 , 103314138",null,"662422 [Gene Symbol: LOC662422] [Locus Tag: TcasGA2_TC006777] [Chromosome: LG8] [Map Location: ] [Description: ankyrin repeat domain-containing protein 6] [Gene Type: protein-coding] || 100142582 [Gene Symbol: LOC100142582] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: cytochrome P450 9e2] [Gene Type: protein-coding] || 103314138 [Gene Symbol: LOC103314138] [Locus Tag: TcasGA2_TC005348] [Chromosome: LG8] [Map Location: ] [Description: voltage-dependent T-type calcium channel subunit alpha-1G] [Gene Type: protein-coding]","LOC662422; TcasGA2_TC006777 || LOC100142582 || TcasGA2_TC005348; LOC103314138"]
[1564,"NC_007424.3",189975,"SNV","A","G","Homozygous",20,20,100,1,14,9,0.39,39.05,23,23,11,14,null,1,1,"no","G/G","No",1,80.09,"XP_008191527.1:c.3632T>C","XP_008191527.1:p.Leu1211Pro","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1565,"NC_007424.3",193625,"SNV","C","T","Homozygous",21,21,100,1,8,13,0.38,38.29,21,21,13,16,null,1,1,"no","T/T","No",1,84.7,"XP_008191527.1:c.1222G>A","XP_008191527.1:p.Ala408Thr","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1569,"NC_007424.3","2408239..2408240","MNV","GG","TA","Heterozygous",13,23,56.52,1,7,6,0.46,37.27,13,23,9,12,-0.84,0.88,1,"no","complex","No",1,200,"XP_008198593.1:c.2067_2068delCCinsTA","XP_008198593.1:p.Leu690Ile","LOC103314394",103314394,null,"103314394 [Gene Symbol: LOC103314394] [Locus Tag: TcasGA2_TC001668] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC001668; LOC103314394"]
[1570,"NC_007424.3",2417247,"SNV","G","A","Heterozygous",18,31,58.06,1,14,9,0.39,36.94,23,38,9,11,-2.2,0.67,0.99,"no","A/G","No",1,93.22,"XP_008198593.1:c.899C>T","XP_008198593.1:p.Thr300Ile","LOC103314394",103314394,null,"103314394 [Gene Symbol: LOC103314394] [Locus Tag: TcasGA2_TC001668] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC001668; LOC103314394"]
[1571,"NC_007424.3",2424705,"Deletion","T","-","Heterozygous",12,21,57.14,1,9,4,0.31,37.42,13,23,5,8,-1.14,0.84,0.93,"no","-/T","No",1,69.48,"XP_008198596.1:c.134delT","XP_008198596.1:p.Leu45fs","LOC657915",657915,null,"657915 [Gene Symbol: LOC657915] [Locus Tag: TcasGA2_TC001674] [Chromosome: LG9] [Map Location: ] [Description: SH3 domain-binding protein 5 homolog] [Gene Type: protein-coding]","TcasGA2_TC001674; LOC657915"]
[1572,"NC_007424.3",2424737,"SNV","T","C","Heterozygous",14,24,58.33,1,11,4,0.27,36.57,15,26,6,8,-0.59,0.97,1,"no","C/T","No",1,73.29,"XP_008198596.1:c.166T>C","XP_008198596.1:p.Ser56Pro","LOC657915",657915,null,"657915 [Gene Symbol: LOC657915] [Locus Tag: TcasGA2_TC001674] [Chromosome: LG9] [Map Location: ] [Description: SH3 domain-binding protein 5 homolog] [Gene Type: protein-coding]","TcasGA2_TC001674; LOC657915"]
[1573,"NC_007424.3",2424782,"SNV","G","A","Heterozygous",11,22,50,1,4,7,0.36,38.64,11,22,5,8,-0.79,0.46,0.95,"no","A/G","No",1,89.21,"XP_008198596.1:c.211G>A","XP_008198596.1:p.Glu71Lys","LOC657915",657915,null,"657915 [Gene Symbol: LOC657915] [Locus Tag: TcasGA2_TC001674] [Chromosome: LG9] [Map Location: ] [Description: SH3 domain-binding protein 5 homolog] [Gene Type: protein-coding]","TcasGA2_TC001674; LOC657915"]
[1574,"NC_007424.3",2442057,"SNV","T","C","Homozygous",23,23,100,1,18,7,0.28,39,25,25,13,16,null,1,1,"no","C/C","No",1,89.15,"XP_008198597.1:c.[3911A>G]; XP_008198598.1:c.[3833A>G]","XP_008198597.1:p.[Lys1304Arg]; XP_008198598.1:p.[Lys1278Arg]","LOC657993",657993,null,"657993 [Gene Symbol: LOC657993] [Locus Tag: TcasGA2_TC001667] [Chromosome: LG9] [Map Location: ] [Description: integrin alpha-PS2] [Gene Type: protein-coding]","TcasGA2_TC001667; LOC657993"]
[1576,"NC_007424.3",3489962,"SNV","C","G","Homozygous",21,21,100,1,10,13,0.43,36.29,23,23,9,9,null,1,1,"no","G/G","No",1,83.1,"XP_970874.1:c.[68C>G]; XP_008197549.1:c.[73+7171C>G]","XP_970874.1:p.Thr23Ser","LOC659477",659477,null,"659477 [Gene Symbol: LOC659477] [Locus Tag: TcasGA2_TC012272] [Chromosome: LG9] [Map Location: ] [Description: protein phosphatase PP2A 55 kDa regulatory subunit] [Gene Type: protein-coding]","TcasGA2_TC012272; LOC659477"]
[1577,"NC_007424.3",3648595,"SNV","A","G","Homozygous",22,22,100,1,16,15,0.48,38.68,31,31,14,12,null,1,1,"no","G/G","No",1,86.11,"XP_008197559.1:c.560T>C","XP_008197559.1:p.Ile187Thr","LOC103314171, LOC103314173","103314171 , 103314173",null,"103314171 [Gene Symbol: LOC103314171] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: 39S ribosomal protein L55, mitochondrial] [Gene Type: protein-coding] || 103314173 [Gene Symbol: LOC103314173] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: ankyrin-3-like] [Gene Type: protein-coding]","LOC103314171 || LOC103314173"]
[1580,"NC_007424.3",3836052,"SNV","A","G","Homozygous",21,22,95.45,1,9,17,0.35,38.52,26,27,14,15,null,1,1,"no","G/G","No",1,54.35,"XP_015838676.1:c.614A>G","XP_015838676.1:p.Lys205Arg","LOC103314163",103314163,null,"103314163 [Gene Symbol: LOC103314163] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: solute carrier family 2, facilitated glucose transporter member 8-like] [Gene Type: protein-coding]","LOC103314163"]
[1582,"NC_007424.3",3979519,"SNV","A","T","Homozygous",21,21,100,1,8,18,0.31,36.62,26,26,10,14,null,1,1,"no","T/T","No",1,84.7,"NP_001164246.1:c.[1081T>A]; XP_008197529.1:c.[1081T>A]","NP_001164246.1:p.[Leu361Met]; XP_008197529.1:p.[Leu361Met]","LOC662353",662353,"epsin-like protein","662353 [Gene Symbol: LOC662353] [Locus Tag: TcasGA2_TC012168] [Chromosome: LG9] [Map Location: ] [Description: epsin-like protein] [Gene Type: protein-coding]","TcasGA2_TC012168; LOC662353; GLEAN_12168"]
[1583,"NC_007424.3",3993990,"SNV","A","C","Homozygous",20,20,100,1,12,11,0.48,38.9,23,23,11,11,null,1,1,"no","C/C","No",1,80.12,"XP_015838644.1:c.1124A>C","XP_015838644.1:p.Asn375Thr","LOC662526",662526,null,"662526 [Gene Symbol: LOC662526] [Locus Tag: TcasGA2_TC012309] [Chromosome: LG9] [Map Location: ] [Description: glycogen debranching enzyme] [Gene Type: protein-coding]","TcasGA2_TC012309; LOC662526"]
[1586,"NC_007424.3","4868298..4868299","MNV","TC","CA","Homozygous",21,21,100,1,4,17,0.19,39.98,21,21,8,8,null,1,1,"no","CA/CA","No",1,200,"XP_967356.1:c.75_76delTCinsCA","XP_967356.1:p.His26Asn","LOC655702",655702,null,"655702 [Gene Symbol: LOC655702] [Locus Tag: TcasGA2_TC012328] [Chromosome: LG9] [Map Location: ] [Description: peroxiredoxin-1] [Gene Type: protein-coding]","TcasGA2_TC012328; LOC655702"]
[1587,"NC_007424.3",5035888,"SNV","G","A","Homozygous",31,31,100,1,17,19,0.47,38,36,36,21,23,null,1,1,"no","A/A","No",1,114.78,"XP_008197643.1:c.[1511G>A]; XP_008197642.1:c.[1511G>A]","XP_008197643.1:p.[Arg504Gln]; XP_008197642.1:p.[Arg504Gln]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1588,"NC_007424.3",5036154,"SNV","A","G","Homozygous",24,24,100,1,15,11,0.42,38.79,26,26,14,16,null,1,1,"no","G/G","No",1,92.12,"XP_008197642.1:c.[1777A>G]; XP_008197643.1:c.[1777A>G]","XP_008197642.1:p.[Thr593Ala]; XP_008197643.1:p.[Thr593Ala]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1589,"NC_007424.3",5036665,"SNV","G","C","Homozygous",24,24,100,1,14,10,0.42,37.33,24,24,11,15,null,1,1,"no","C/C","No",1,92.16,"XP_008197643.1:c.[2288G>C]; XP_008197642.1:c.[2288G>C]","XP_008197643.1:p.[Ser763Thr]; XP_008197642.1:p.[Ser763Thr]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1590,"NC_007424.3",5037292,"Deletion","T","-","Heterozygous",11,24,45.83,1,11,2,0.15,37.45,13,27,5,8,-1.19,0.64,0.87,"no","-/T","No",1,85.3,"XP_008197643.1:c.[2866delT]; XP_008197642.1:c.[2866delT]","XP_008197643.1:p.[Ser956fs]; XP_008197642.1:p.[Ser956fs]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1592,"NC_007424.3",5044913,"SNV","T","A","Homozygous",24,24,100,1,7,21,0.25,38.33,28,28,11,13,null,1,1,"no","A/A","No",1,93.72,"XP_015838749.1:c.[1290A>T]; XP_008197647.1:c.[1461A>T]; XP_008197645.1:c.[1290A>T]","XP_015838749.1:p.[Leu430Phe]; XP_008197647.1:p.[Leu487Phe]; XP_008197645.1:p.[Leu430Phe]","LOC656621",656621,null,"656621 [Gene Symbol: LOC656621] [Locus Tag: TcasGA2_TC012131] [Chromosome: LG9] [Map Location: ] [Description: xanthine dehydrogenase] [Gene Type: protein-coding]","LOC656621; TcasGA2_TC012131"]
[1593,"NC_007424.3",5063846,"SNV","T","C","Homozygous",20,20,100,1,11,10,0.48,38.35,21,21,10,12,null,1,1,"no","C/C","No",1,80.12,"XP_008197649.1:c.[577A>G]; XP_008197648.1:c.[577A>G]","XP_008197649.1:p.[Lys193Glu]; XP_008197648.1:p.[Lys193Glu]","LOC656875",656875,null,"656875 [Gene Symbol: LOC656875] [Locus Tag: TcasGA2_TC012129] [Chromosome: LG9] [Map Location: ] [Description: transport and Golgi organization protein 1] [Gene Type: protein-coding]","TcasGA2_TC012129; LOC656875"]
[1594,"NC_007424.3",5188420,"SNV","A","G","Homozygous",24,25,96,1,11,13,0.46,38.17,24,25,7,13,null,1,1,"no","G/G","No",1,69.14,"XP_001811380.1:c.[320T>C]; XP_008197665.1:c.[338T>C]; XP_008197666.1:c.[224T>C]","XP_001811380.1:p.[Ile107Thr]; XP_008197665.1:p.[Ile113Thr]; XP_008197666.1:p.[Ile75Thr]","LOC100142002",100142002,null,"100142002 [Gene Symbol: LOC100142002] [Locus Tag: TcasGA2_TC012126] [Chromosome: LG9] [Map Location: ] [Description: probable aminoacyl tRNA synthase complex-interacting multifunctional protein 2] [Gene Type: protein-coding]","LOC100142002; TcasGA2_TC012126"]
[1595,"NC_007424.3",5205481,"SNV","G","A","Homozygous",20,20,100,1,17,8,0.32,37.65,25,25,12,16,null,1,1,"no","A/A","No",1,81.69,"XP_966343.1:c.727C>T","XP_966343.1:p.Leu243Phe","LOC656992",656992,null,"656992 [Gene Symbol: LOC656992] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: 4-aminobutyrate aminotransferase, mitochondrial-like] [Gene Type: protein-coding]","LOC656992"]
[1596,"NC_007424.3",5241005,"SNV","A","T","Homozygous",23,23,100,1,16,7,0.3,38.26,23,23,11,16,null,1,1,"no","T/T","No",1,90.72,"XP_015838725.1:c.[400A>T]; XP_015838729.1:c.[142A>T]; XP_015838726.1:c.[400A>T]; XP_008197678.1:c.[400A>T]; XP_015838734.1:c.[142A>T]; XP_015838731.1:c.[196A>T]; XP_015838733.1:c.[193A>T]; XP_015838730.1:c.[400A>T]; XP_015838728.1:c.[271A>T]; XP_015838727.1:c.[280A>T]; XP_015838732.1:c.[196A>T]; XP_015838724.1:c.[400A>T]","XP_015838725.1:p.[Thr134Ser]; XP_015838729.1:p.[Thr48Ser]; XP_015838726.1:p.[Thr134Ser]; XP_008197678.1:p.[Thr134Ser]; XP_015838734.1:p.[Thr48Ser]; XP_015838731.1:p.[Thr66Ser]; XP_015838733.1:p.[Thr65Ser]; XP_015838730.1:p.[Thr134Ser]; XP_015838728.1:p.[Thr91Ser]; XP_015838727.1:p.[Thr94Ser]; XP_015838732.1:p.[Thr66Ser]; XP_015838724.1:p.[Thr134Ser]","Doc, LOC100141654","654492 , 100141654","dorsocross","654492 [Gene Symbol: Doc] [Locus Tag: TcasGA2_TC012346] [Chromosome: LG9] [Map Location: ] [Description: dorsocross] [Gene Type: protein-coding] || 100141654 [Gene Symbol: LOC100141654] [Locus Tag: TcasGA2_TC012347] [Chromosome: LG9] [Map Location: ] [Description: kinase D-interacting substrate of 220 kDa] [Gene Type: protein-coding]","Doc; Tc-doc; TcasGA2_TC012346 || TcasGA2_TC012347; LOC100141654"]
[1597,"NC_007424.3",5487630,"SNV","G","A","Homozygous",23,23,100,1,16,11,0.41,38.22,27,27,12,18,null,1,1,"no","A/A","No",1,90.72,"XP_008197689.1:c.3517G>A","XP_008197689.1:p.Val1173Ile","LOC100142008",100142008,null,"100142008 [Gene Symbol: LOC100142008] [Locus Tag: TcasGA2_TC012353] [Chromosome: LG9] [Map Location: ] [Description: mucin-4] [Gene Type: protein-coding]","TcasGA2_TC012353; LOC100142008"]
[1598,"NC_007424.3",5734696,"SNV","C","G","Homozygous",24,24,100,1,6,18,0.25,37.83,24,24,8,13,null,1,1,"no","G/G","No",1,92.13,"XP_008197709.1:c.[3280G>C]; XP_008197710.1:c.[3280G>C]; XP_015838761.1:c.[611-987G>C]; XP_015838762.1:c.[611-7585G>C]","XP_008197709.1:p.[Glu1094Gln]; XP_008197710.1:p.[Glu1094Gln]","LOC658064",658064,null,"658064 [Gene Symbol: LOC658064] [Locus Tag: TcasGA2_TC012107] [Chromosome: LG9] [Map Location: ] [Description: putative protein kinase C delta type homolog] [Gene Type: protein-coding]","LOC658064; TcasGA2_TC012107"]
[1599,"NC_007424.3",5734963,"SNV","T","G","Homozygous",31,31,100,1,25,11,0.31,37.48,36,36,14,22,null,1,1,"no","G/G","No",1,110.18,"XP_015838761.1:c.[611-1254A>C]; XP_015838762.1:c.[610+7499A>C]; XP_008197710.1:c.[3013A>C]; XP_008197709.1:c.[3013A>C]","XP_008197710.1:p.[Lys1005Gln]; XP_008197709.1:p.[Lys1005Gln]","LOC658064",658064,null,"658064 [Gene Symbol: LOC658064] [Locus Tag: TcasGA2_TC012107] [Chromosome: LG9] [Map Location: ] [Description: putative protein kinase C delta type homolog] [Gene Type: protein-coding]","LOC658064; TcasGA2_TC012107"]
[1600,"NC_007424.3",5734971,"SNV","G","T","Homozygous",28,28,100,1,22,12,0.35,39.43,34,34,13,19,null,1,1,"no","T/T","No",1,105.76,"XP_008197710.1:c.[3005C>A]; XP_015838762.1:c.[610+7491C>A]; XP_015838761.1:c.[611-1262C>A]; XP_008197709.1:c.[3005C>A]","XP_008197710.1:p.[Thr1002Asn]; XP_008197709.1:p.[Thr1002Asn]","LOC658064",658064,null,"658064 [Gene Symbol: LOC658064] [Locus Tag: TcasGA2_TC012107] [Chromosome: LG9] [Map Location: ] [Description: putative protein kinase C delta type homolog] [Gene Type: protein-coding]","LOC658064; TcasGA2_TC012107"]
[1601,"NC_007424.3",5753530,"SNV","T","A","Homozygous",20,20,100,1,14,7,0.33,38.7,21,21,13,15,null,1,1,"no","A/A","No",1,81.69,"XP_969798.1:c.1019T>A","XP_969798.1:p.Phe340Tyr","LOC658303",658303,null,"658303 [Gene Symbol: LOC658303] [Locus Tag: TcasGA2_TC012364] [Chromosome: LG9] [Map Location: ] [Description: glucoside xylosyltransferase 2] [Gene Type: protein-coding]","LOC658303; TcasGA2_TC012364"]
[1602,"NC_007424.3","5830055..5830056","MNV","AG","GA","Homozygous",20,20,100,1,6,18,0.25,38.72,24,24,11,14,null,1,1,"no","GA/GA","No",1,200,"XP_015838711.1:c.[1394_1395delCTinsTC]; XP_008197729.1:c.[1394_1395delCTinsTC]; XP_015838712.1:c.[1394_1395delCTinsTC]","XP_015838711.1:p.[Pro465Leu]; XP_008197729.1:p.[Pro465Leu]; XP_015838712.1:p.[Pro465Leu]","LOC659540",659540,null,"659540 [Gene Symbol: LOC659540] [Locus Tag: TcasGA2_TC012101] [Chromosome: LG9] [Map Location: ] [Description: acylamino-acid-releasing enzyme] [Gene Type: protein-coding]","LOC659540; TcasGA2_TC012101"]
[1603,"NC_007424.3","5832634^5832635","Insertion","-","GCT","Homozygous",20,20,100,1,5,18,0.22,36.9,23,23,12,14,null,1,1,"no","GCT/GCT","No",1,200,"XP_015838711.1:c.[489_490insAGC]; XP_015838712.1:c.[489_490insAGC]; XP_008197729.1:c.[489_490insAGC]","XP_015838711.1:p.[Ser163_Asp164insSer]; XP_015838712.1:p.[Ser163_Asp164insSer]; XP_008197729.1:p.[Ser163_Asp164insSer]","LOC659540",659540,null,"659540 [Gene Symbol: LOC659540] [Locus Tag: TcasGA2_TC012101] [Chromosome: LG9] [Map Location: ] [Description: acylamino-acid-releasing enzyme] [Gene Type: protein-coding]","LOC659540; TcasGA2_TC012101"]
[1604,"NC_007424.3",6079165,"SNV","T","G","Homozygous",23,23,100,1,17,9,0.35,36.83,26,26,9,13,null,1,1,"no","G/G","No",1,89.12,"XP_008197748.1:c.[625A>C]; XP_972190.1:c.[4078-3249T>G]","XP_008197748.1:p.Lys209Gln","LOC660900, LOC103314202","660900 , 103314202",null,"660900 [Gene Symbol: LOC660900] [Locus Tag: TcasGA2_TC012392] [Chromosome: LG9] [Map Location: ] [Description: CAD protein] [Gene Type: protein-coding] || 103314202 [Gene Symbol: LOC103314202] [Locus Tag: TcasGA2_TC012093] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314202] [Gene Type: protein-coding]","LOC660900; TcasGA2_TC012392 || LOC103314202; TcasGA2_TC012093"]
[1605,"NC_007424.3",6083978,"SNV","G","A","Homozygous",21,21,100,1,13,14,0.48,36.67,27,27,14,12,null,1,1,"no","A/A","No",1,84.71,"XP_972190.1:c.5642G>A","XP_972190.1:p.Gly1881Asp","LOC660900",660900,null,"660900 [Gene Symbol: LOC660900] [Locus Tag: TcasGA2_TC012392] [Chromosome: LG9] [Map Location: ] [Description: CAD protein] [Gene Type: protein-coding]","LOC660900; TcasGA2_TC012392"]
[1606,"NC_007424.3",6088219,"SNV","T","A","Homozygous",21,21,100,1,17,5,0.23,37.76,22,22,9,15,null,1,1,"no","A/A","No",1,84.7,"XP_008197747.1:c.327A>T","XP_008197747.1:p.Gln109His","LOC103314201",103314201,null,"103314201 [Gene Symbol: LOC103314201] [Locus Tag: TcasGA2_TC012092] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC012092; LOC103314201"]
[1607,"NC_007424.3","6188964..6188965","MNV","GC","TT","Homozygous",19,21,90.48,1,10,13,0.43,37.16,23,27,11,16,null,0.84,1,"no","TT/TT","No",1,200,"XP_008197754.1:c.[594_595delGCinsAA]; XP_008197758.1:c.[594_595delGCinsAA]; XP_008197756.1:c.[594_595delGCinsAA]; XP_008197755.1:c.[594_595delGCinsAA]; XP_008197759.1:c.[594_595delGCinsAA]; XP_008197757.1:c.[528_529delGCinsAA]","XP_008197754.1:p.[Leu199Ile]; XP_008197758.1:p.[Leu199Ile]; XP_008197756.1:p.[Leu199Ile]; XP_008197755.1:p.[Leu199Ile]; XP_008197759.1:p.[Leu199Ile]; XP_008197757.1:p.[Leu177Ile]","LOC661284",661284,null,"661284 [Gene Symbol: LOC661284] [Locus Tag: TcasGA2_TC012085] [Chromosome: LG9] [Map Location: ] [Description: partitioning defective 3 homolog B] [Gene Type: protein-coding]","TcasGA2_TC012085; LOC661284"]
[1609,"NC_007424.3",6702009,"SNV","T","G","Homozygous",25,25,100,1,14,17,0.45,36.64,31,31,11,20,null,1,1,"no","G/G","No",1,95.13,"XP_966481.1:c.481T>G","XP_966481.1:p.Ser161Ala","LOC654948",654948,null,"654948 [Gene Symbol: LOC654948] [Locus Tag: TcasGA2_TC012407] [Chromosome: LG9] [Map Location: ] [Description: methenyltetrahydrofolate synthase domain-containing protein] [Gene Type: protein-coding]","TcasGA2_TC012407; LOC654948"]
[1610,"NC_007424.3",7067089,"SNV","A","G","Homozygous",20,20,100,1,13,11,0.46,38.25,24,24,11,12,null,1,1,"no","G/G","No",1,80.09,"XP_015838683.1:c.[413T>C]; XP_008197811.1:c.[419T>C]","XP_015838683.1:p.[Leu138Pro]; XP_008197811.1:p.[Leu140Pro]","LOC657435",657435,null,"657435 [Gene Symbol: LOC657435] [Locus Tag: TcasGA2_TC012052] [Chromosome: LG9] [Map Location: ] [Description: salivary glue protein Sgs-4] [Gene Type: protein-coding]","LOC657435; TcasGA2_TC012052"]
[1611,"NC_007424.3","7081276..7081277","MNV","AA","GT","Homozygous",26,26,100,1,24,7,0.23,36.78,31,31,18,18,null,1,1,"no","GT/GT","No",1,200,"XP_008197817.1:c.749_750delTTinsAC","XP_008197817.1:p.Phe250Tyr","LOC103314220",103314220,null,"103314220 [Gene Symbol: LOC103314220] [Locus Tag: TcasGA2_TC012049] [Chromosome: LG9] [Map Location: ] [Description: vacuolar protein sorting-associated protein VTA1 homolog] [Gene Type: protein-coding]","TcasGA2_TC012049; LOC103314220"]
[1612,"NC_007424.3","7452370^7452371","Insertion","-","CAG","Heterozygous",5,24,20.83,1,0,5,0,36.67,5,28,2,4,-1.87,0.04,0.17,"no","complex","No",1,200,"XP_008197843.1:c.[1914_1915insCAG]; XP_008197844.1:c.[1893_1894insCAG]; XP_971362.2:c.[1860_1861insCAG]; XP_015838722.1:c.[1785_1786insCAG]; XP_015838721.1:c.[1806_1807insCAG]; XP_008197845.1:c.[1686_1687insCAG]","XP_008197843.1:p.[Gln642_Ser643insGln]; XP_008197844.1:p.[Gln635_Ser636insGln]; XP_971362.2:p.[Gln624_Ser625insGln]; XP_015838722.1:p.[Gln599_Ser600insGln]; XP_015838721.1:p.[Gln606_Ser607insGln]; XP_008197845.1:p.[Gln566_Ser567insGln]","LOC660005",660005,null,"660005 [Gene Symbol: LOC660005] [Locus Tag: TcasGA2_TC012438] [Chromosome: LG9] [Map Location: ] [Description: ecdysone-inducible protein E75] [Gene Type: protein-coding]","TcasGA2_TC012438; E75C; LOC660005; E75; Eip75B; E75B; NR1D3"]
[1613,"NC_007424.3",7477950,"SNV","T","C","Homozygous",22,22,100,1,13,9,0.41,38.14,22,22,11,15,null,1,1,"no","C/C","No",1,86.13,"XP_971422.1:c.1744A>G","XP_971422.1:p.Lys582Glu","LOC660067",660067,null,"660067 [Gene Symbol: LOC660067] [Locus Tag: TcasGA2_TC012032] [Chromosome: LG9] [Map Location: ] [Description: pre-rRNA processing protein FTSJ3] [Gene Type: protein-coding]","LOC660067; TcasGA2_TC012032"]
[1614,"NC_007424.3",7708570,"SNV","G","C","Homozygous",23,23,100,1,16,8,0.33,37.48,24,24,10,13,null,1,1,"no","C/C","No",1,89.14,"XP_008197857.1:c.[1864C>G]; XP_008197856.1:c.[2308C>G]","XP_008197857.1:p.[Leu622Val]; XP_008197856.1:p.[Leu770Val]","LOC660795",660795,null,"660795 [Gene Symbol: LOC660795] [Locus Tag: TcasGA2_TC012023] [Chromosome: LG9] [Map Location: ] [Description: WD repeat and HMG-box DNA-binding protein 1] [Gene Type: protein-coding]","TcasGA2_TC012023; LOC660795"]
[1615,"NC_007424.3",8054814,"SNV","C","T","Homozygous",21,22,95.45,1,18,7,0.28,35.43,25,26,12,14,null,0.99,1,"no","T/T","No",1,55.9,"XP_001809953.1:c.2816G>A","XP_001809953.1:p.Ser939Asn","LOC100141957",100141957,null,"100141957 [Gene Symbol: LOC100141957] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141957] [Gene Type: protein-coding]","LOC100141957"]
[1616,"NC_007424.3","8055059..8055060","MNV","AG","GC","Homozygous",25,25,100,1,11,15,0.42,37.59,26,26,10,16,null,1,1,"no","GC/GC","No",1,200,"XP_001809953.1:c.2570_2571delCTinsGC","XP_001809953.1:p.Ala857Gly","LOC100141957",100141957,null,"100141957 [Gene Symbol: LOC100141957] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141957] [Gene Type: protein-coding]","LOC100141957"]
[1617,"NC_007424.3",8055426,"SNV","A","T","Homozygous",30,30,100,1,22,9,0.29,36.83,31,31,15,21,null,1,1,"no","T/T","No",1,111.78,"XP_001809953.1:c.2251T>A","XP_001809953.1:p.Ser751Thr","LOC100141957",100141957,null,"100141957 [Gene Symbol: LOC100141957] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141957] [Gene Type: protein-coding]","LOC100141957"]
[1620,"NC_007424.3",8102974,"SNV","C","T","Homozygous",22,22,100,1,9,16,0.36,36.32,25,25,12,18,null,1,1,"no","T/T","No",1,87.71,"XP_015839008.1:c.[25963G>A]; XP_015839002.1:c.[36256G>A]; XP_015839006.1:c.[36373G>A]; XP_015839000.1:c.[36310G>A]; XP_015838997.1:c.[36346G>A]; XP_015839001.1:c.[36298G>A]; XP_015839004.1:c.[36142G>A]; XP_015839003.1:c.[36184G>A]; XP_015839007.1:c.[26269G>A]; XP_015838996.1:c.[36358G>A]; XP_015838999.1:c.[36331G>A]; XP_015839005.1:c.[36067G>A]; XP_015839010.1:c.[25963G>A]; XP_015838998.1:c.[36373G>A]","XP_015839008.1:p.[Val8655Ile]; XP_015839002.1:p.[Val12086Ile]; XP_015839006.1:p.[Val12125Ile]; XP_015839000.1:p.[Val12104Ile]; XP_015838997.1:p.[Val12116Ile]; XP_015839001.1:p.[Val12100Ile]; XP_015839004.1:p.[Val12048Ile]; XP_015839003.1:p.[Val12062Ile]; XP_015839007.1:p.[Val8757Ile]; XP_015838996.1:p.[Val12120Ile]; XP_015838999.1:p.[Val12111Ile]; XP_015839005.1:p.[Val12023Ile]; XP_015839010.1:p.[Val8655Ile]; XP_015838998.1:p.[Val12125Ile]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1621,"NC_007424.3",8104633,"SNV","G","C","Homozygous",21,21,100,1,16,6,0.27,38.05,22,22,11,18,null,1,1,"no","C/C","No",1,83.12,"XP_015838999.1:c.[34672C>G]; XP_015838996.1:c.[34699C>G]; XP_015839004.1:c.[34483C>G]; XP_015838997.1:c.[34687C>G]; XP_015839000.1:c.[34651C>G]; XP_015839001.1:c.[34639C>G]; XP_015839006.1:c.[34714C>G]; XP_015839007.1:c.[24610C>G]; XP_015839010.1:c.[24304C>G]; XP_015839003.1:c.[34525C>G]; XP_015839002.1:c.[34597C>G]; XP_015839008.1:c.[24304C>G]; XP_015838998.1:c.[34714C>G]; XP_015839005.1:c.[34408C>G]","XP_015838999.1:p.[Gln11558Glu]; XP_015838996.1:p.[Gln11567Glu]; XP_015839004.1:p.[Gln11495Glu]; XP_015838997.1:p.[Gln11563Glu]; XP_015839000.1:p.[Gln11551Glu]; XP_015839001.1:p.[Gln11547Glu]; XP_015839006.1:p.[Gln11572Glu]; XP_015839007.1:p.[Gln8204Glu]; XP_015839010.1:p.[Gln8102Glu]; XP_015839003.1:p.[Gln11509Glu]; XP_015839002.1:p.[Gln11533Glu]; XP_015839008.1:p.[Gln8102Glu]; XP_015838998.1:p.[Gln11572Glu]; XP_015839005.1:p.[Gln11470Glu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1622,"NC_007424.3",8111808,"SNV","A","G","Homozygous",21,21,100,1,13,12,0.48,38.71,25,25,13,12,null,1,1,"no","G/G","No",1,83.1,"XP_015839007.1:c.[23728-5423T>C]; XP_015839004.1:c.[28388T>C]; XP_015838997.1:c.[28592T>C]; XP_015838998.1:c.[28619T>C]; XP_015839008.1:c.[23422-5423T>C]; XP_015839003.1:c.[28430T>C]; XP_015839006.1:c.[28619T>C]; XP_015839002.1:c.[28502T>C]; XP_015839005.1:c.[28313T>C]; XP_015839001.1:c.[28544T>C]; XP_015838999.1:c.[28577T>C]; XP_015838996.1:c.[28604T>C]; XP_015839000.1:c.[28556T>C]; XP_015839010.1:c.[23422-5423T>C]","XP_015839004.1:p.[Ile9463Thr]; XP_015838997.1:p.[Ile9531Thr]; XP_015838998.1:p.[Ile9540Thr]; XP_015839003.1:p.[Ile9477Thr]; XP_015839006.1:p.[Ile9540Thr]; XP_015839002.1:p.[Ile9501Thr]; XP_015839005.1:p.[Ile9438Thr]; XP_015839001.1:p.[Ile9515Thr]; XP_015838999.1:p.[Ile9526Thr]; XP_015838996.1:p.[Ile9535Thr]; XP_015839000.1:p.[Ile9519Thr]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1623,"NC_007424.3",8111813,"SNV","T","C","Homozygous",20,21,95.24,1,10,12,0.45,38.75,22,23,13,12,null,1,1,"no","C/C","No",1,53.5,"XP_015839005.1:c.[28308A>G]; XP_015838998.1:c.[28614A>G]; XP_015839002.1:c.[28497A>G]; XP_015838997.1:c.[28587A>G]; XP_015839001.1:c.[28539A>G]; XP_015839010.1:c.[23422-5428A>G]; XP_015838999.1:c.[28572A>G]; XP_015839007.1:c.[23728-5428A>G]; XP_015838996.1:c.[28599A>G]; XP_015839008.1:c.[23422-5428A>G]; XP_015839003.1:c.[28425A>G]; XP_015839000.1:c.[28551A>G]; XP_015839006.1:c.[28614A>G]; XP_015839004.1:c.[28383A>G]","XP_015839005.1:p.[Ile9436Met]; XP_015838998.1:p.[Ile9538Met]; XP_015839002.1:p.[Ile9499Met]; XP_015838997.1:p.[Ile9529Met]; XP_015839001.1:p.[Ile9513Met]; XP_015838999.1:p.[Ile9524Met]; XP_015838996.1:p.[Ile9533Met]; XP_015839003.1:p.[Ile9475Met]; XP_015839000.1:p.[Ile9517Met]; XP_015839006.1:p.[Ile9538Met]; XP_015839004.1:p.[Ile9461Met]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1624,"NC_007424.3",8111827,"SNV","C","G","Homozygous",22,22,100,1,11,13,0.46,38.55,24,24,14,13,null,1,1,"no","G/G","No",1,86.11,"XP_015839006.1:c.[28600G>C]; XP_015839002.1:c.[28483G>C]; XP_015838999.1:c.[28558G>C]; XP_015838996.1:c.[28585G>C]; XP_015839007.1:c.[23728-5442G>C]; XP_015838997.1:c.[28573G>C]; XP_015839008.1:c.[23422-5442G>C]; XP_015839001.1:c.[28525G>C]; XP_015839010.1:c.[23422-5442G>C]; XP_015839005.1:c.[28294G>C]; XP_015839003.1:c.[28411G>C]; XP_015839004.1:c.[28369G>C]; XP_015838998.1:c.[28600G>C]; XP_015839000.1:c.[28537G>C]","XP_015839006.1:p.[Val9534Leu]; XP_015839002.1:p.[Val9495Leu]; XP_015838999.1:p.[Val9520Leu]; XP_015838996.1:p.[Val9529Leu]; XP_015838997.1:p.[Val9525Leu]; XP_015839001.1:p.[Val9509Leu]; XP_015839005.1:p.[Val9432Leu]; XP_015839003.1:p.[Val9471Leu]; XP_015839004.1:p.[Val9457Leu]; XP_015838998.1:p.[Val9534Leu]; XP_015839000.1:p.[Val9513Leu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1625,"NC_007424.3",8124566,"SNV","C","T","Homozygous",30,30,100,1,18,15,0.45,36.77,33,33,14,22,null,1,1,"no","T/T","No",1,111.77,"XP_015838997.1:c.[21127G>A]; XP_015839010.1:c.[20848G>A]; XP_015839006.1:c.[21154G>A]; XP_015839009.1:c.[21154G>A]; XP_015839005.1:c.[20848G>A]; XP_015838998.1:c.[21154G>A]; XP_015839011.1:c.[21037G>A]; XP_015838996.1:c.[21139G>A]; XP_015839008.1:c.[20848G>A]; XP_015839007.1:c.[21154G>A]; XP_015838999.1:c.[21112G>A]; XP_015839004.1:c.[20923G>A]; XP_015839002.1:c.[21037G>A]; XP_015839003.1:c.[20965G>A]; XP_015839000.1:c.[21154G>A]; XP_015839001.1:c.[21079G>A]","XP_015838997.1:p.[Asp7043Asn]; XP_015839010.1:p.[Asp6950Asn]; XP_015839006.1:p.[Asp7052Asn]; XP_015839009.1:p.[Asp7052Asn]; XP_015839005.1:p.[Asp6950Asn]; XP_015838998.1:p.[Asp7052Asn]; XP_015839011.1:p.[Asp7013Asn]; XP_015838996.1:p.[Asp7047Asn]; XP_015839008.1:p.[Asp6950Asn]; XP_015839007.1:p.[Asp7052Asn]; XP_015838999.1:p.[Asp7038Asn]; XP_015839004.1:p.[Asp6975Asn]; XP_015839002.1:p.[Asp7013Asn]; XP_015839003.1:p.[Asp6989Asn]; XP_015839000.1:p.[Asp7052Asn]; XP_015839001.1:p.[Asp7027Asn]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1626,"NC_007424.3",8126204,"SNV","A","G","Homozygous",34,34,100,1,20,16,0.44,36.76,36,36,13,22,null,1,1,"no","G/G","No",1,122.22,"XP_015839000.1:c.[19516T>C]; XP_015839011.1:c.[19399T>C]; XP_015839010.1:c.[19210T>C]; XP_015838999.1:c.[19474T>C]; XP_015839001.1:c.[19441T>C]; XP_015839003.1:c.[19327T>C]; XP_015839002.1:c.[19399T>C]; XP_015839005.1:c.[19210T>C]; XP_015839007.1:c.[19516T>C]; XP_015839006.1:c.[19516T>C]; XP_015839008.1:c.[19210T>C]; XP_015839009.1:c.[19516T>C]; XP_015838997.1:c.[19489T>C]; XP_015838996.1:c.[19501T>C]; XP_015839004.1:c.[19285T>C]; XP_015838998.1:c.[19516T>C]","XP_015839000.1:p.[Phe6506Leu]; XP_015839011.1:p.[Phe6467Leu]; XP_015839010.1:p.[Phe6404Leu]; XP_015838999.1:p.[Phe6492Leu]; XP_015839001.1:p.[Phe6481Leu]; XP_015839003.1:p.[Phe6443Leu]; XP_015839002.1:p.[Phe6467Leu]; XP_015839005.1:p.[Phe6404Leu]; XP_015839007.1:p.[Phe6506Leu]; XP_015839006.1:p.[Phe6506Leu]; XP_015839008.1:p.[Phe6404Leu]; XP_015839009.1:p.[Phe6506Leu]; XP_015838997.1:p.[Phe6497Leu]; XP_015838996.1:p.[Phe6501Leu]; XP_015839004.1:p.[Phe6429Leu]; XP_015838998.1:p.[Phe6506Leu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1627,"NC_007424.3",8130865,"SNV","C","G","Homozygous",27,27,100,1,8,20,0.29,38.26,28,28,14,18,null,1,1,"no","G/G","No",1,101.16,"XP_015838999.1:c.[17375G>C]; XP_015839010.1:c.[17111G>C]; XP_015839003.1:c.[17228G>C]; XP_015839009.1:c.[17417G>C]; XP_015839005.1:c.[17111G>C]; XP_015838996.1:c.[17402G>C]; XP_015839007.1:c.[17417G>C]; XP_015839008.1:c.[17111G>C]; XP_015839006.1:c.[17417G>C]; XP_015839004.1:c.[17186G>C]; XP_015839000.1:c.[17417G>C]; XP_015839001.1:c.[17342G>C]; XP_015838997.1:c.[17390G>C]; XP_015838998.1:c.[17417G>C]; XP_015839002.1:c.[17300G>C]; XP_015839011.1:c.[17300G>C]","XP_015838999.1:p.[Ser5792Thr]; XP_015839010.1:p.[Ser5704Thr]; XP_015839003.1:p.[Ser5743Thr]; XP_015839009.1:p.[Ser5806Thr]; XP_015839005.1:p.[Ser5704Thr]; XP_015838996.1:p.[Ser5801Thr]; XP_015839007.1:p.[Ser5806Thr]; XP_015839008.1:p.[Ser5704Thr]; XP_015839006.1:p.[Ser5806Thr]; XP_015839004.1:p.[Ser5729Thr]; XP_015839000.1:p.[Ser5806Thr]; XP_015839001.1:p.[Ser5781Thr]; XP_015838997.1:p.[Ser5797Thr]; XP_015838998.1:p.[Ser5806Thr]; XP_015839002.1:p.[Ser5767Thr]; XP_015839011.1:p.[Ser5767Thr]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1630,"NC_007424.3",9205046,"SNV","C","T","Homozygous",26,26,100,1,14,18,0.44,36.85,32,32,14,19,null,1,1,"no","T/T","No",1,99.75,"XP_015839066.1:c.59518G>A","XP_015839066.1:p.Val19840Ile","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1631,"NC_007424.3","9206668..9206669","MNV","TC","GT","Homozygous",22,22,100,1,19,3,0.14,38.34,22,22,13,17,null,1,1,"no","GT/GT","No",1,200,"XP_015839066.1:c.58177_58178delGAinsAC","XP_015839066.1:p.Glu19393Thr","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1632,"NC_007424.3",9207043,"SNV","A","T","Homozygous",20,20,100,1,7,13,0.35,37.25,20,20,14,16,null,1,1,"no","T/T","No",1,81.7,"XP_015839066.1:c.57803T>A","XP_015839066.1:p.Phe19268Tyr","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1633,"NC_007424.3",9208682,"SNV","C","T","Homozygous",24,24,100,1,13,13,0.5,37.88,26,26,16,19,null,1,1,"no","T/T","No",1,93.73,"XP_015839066.1:c.56342G>A","XP_015839066.1:p.Arg18781Gln","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1634,"NC_007424.3",9219572,"SNV","G","C","Homozygous",22,22,100,1,8,15,0.35,39.09,23,23,14,12,null,1,1,"no","C/C","No",1,86.13,"XP_015839066.1:c.46412C>G","XP_015839066.1:p.Thr15471Arg","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1636,"NC_007424.3",10671234,"SNV","C","A","Homozygous",20,20,100,1,12,8,0.4,36.7,20,20,10,12,null,1,1,"no","A/A","No",1,81.7,"XP_008197964.1:c.[3880-1304G>T]; XP_015839160.1:c.[4105-1304G>T]; XP_015839168.1:c.[3667-1304G>T]; XP_008197958.1:c.[4105-1334G>T]; XP_015839165.1:c.[3811-1304G>T]; XP_008197961.1:c.[4021-1304G>T]; XP_008197956.1:c.[4102-1304G>T]; XP_008197949.1:c.[9026G>T]; XP_008197953.1:c.[4105-1304G>T]; XP_008197957.1:c.[4084-1304G>T]; XP_008197963.1:c.[3940-1304G>T]; XP_015839166.1:c.[3808-1304G>T]; XP_015839163.1:c.[4069-1304G>T]; XP_008197960.1:c.[4024-1304G>T]; XP_015839162.1:c.[4105-1304G>T]; XP_015839161.1:c.[4105-1304G>T]; XP_008197959.1:c.[4072-1304G>T]; XP_015839167.1:c.[3727-1304G>T]; XP_008197962.1:c.[4021-1304G>T]; XP_008197955.1:c.[4105-1304G>T]; XP_015839164.1:c.[3892-1304G>T]","XP_008197949.1:p.Arg3009Leu","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1637,"NC_007424.3",10672092,"SNV","T","C","Heterozygous",11,21,52.38,1,5,6,0.45,39,11,25,7,9,1.2,0.97,1,"no","C/T","No",1,81.43,"XP_008197963.1:c.[3940-2162A>G]; XP_015839167.1:c.[3727-2162A>G]; XP_008197955.1:c.[4105-2162A>G]; XP_008197964.1:c.[3880-2162A>G]; XP_008197961.1:c.[4021-2162A>G]; XP_008197956.1:c.[4102-2162A>G]; XP_015839160.1:c.[4105-2162A>G]; XP_008197949.1:c.[8168A>G]; XP_015839163.1:c.[4069-2162A>G]; XP_015839165.1:c.[3811-2162A>G]; XP_015839168.1:c.[3667-2162A>G]; XP_008197960.1:c.[4024-2162A>G]; XP_015839161.1:c.[4105-2162A>G]; XP_015839162.1:c.[4105-2162A>G]; XP_008197962.1:c.[4021-2162A>G]; XP_008197957.1:c.[4084-2162A>G]; XP_008197958.1:c.[4105-2192A>G]; XP_015839166.1:c.[3808-2162A>G]; XP_008197953.1:c.[4105-2162A>G]; XP_015839164.1:c.[3892-2162A>G]; XP_008197959.1:c.[4072-2162A>G]","XP_008197949.1:p.Gln2723Arg","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1638,"NC_007424.3",10673697,"SNV","G","C","Heterozygous",9,20,45,1,4,5,0.44,39.89,9,21,5,8,0.87,0.2,0.82,"no","C/G","No",1,71.64,"XP_015839161.1:c.[4105-3767C>G]; XP_008197962.1:c.[4021-3767C>G]; XP_015839163.1:c.[4069-3767C>G]; XP_008197949.1:c.[6563C>G]; XP_015839168.1:c.[3667-3767C>G]; XP_008197964.1:c.[3880-3767C>G]; XP_015839166.1:c.[3808-3767C>G]; XP_015839162.1:c.[4105-3767C>G]; XP_015839167.1:c.[3727-3767C>G]; XP_008197953.1:c.[4105-3767C>G]; XP_015839165.1:c.[3811-3767C>G]; XP_008197956.1:c.[4102-3767C>G]; XP_008197961.1:c.[4021-3767C>G]; XP_008197958.1:c.[4105-3797C>G]; XP_015839164.1:c.[3892-3767C>G]; XP_008197955.1:c.[4105-3767C>G]; XP_015839160.1:c.[4105-3767C>G]; XP_008197963.1:c.[3940-3767C>G]; XP_008197960.1:c.[4024-3767C>G]; XP_008197959.1:c.[4072-3767C>G]; XP_008197957.1:c.[4084-3767C>G]","XP_008197949.1:p.Pro2188Arg","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1639,"NC_007424.3",10673704,"SNV","T","C","Heterozygous",12,22,54.55,1,6,6,0.5,39.17,12,23,7,10,0.79,0.68,0.94,"no","C/T","No",1,78.76,"XP_015839163.1:c.[4069-3774A>G]; XP_008197957.1:c.[4084-3774A>G]; XP_015839166.1:c.[3808-3774A>G]; XP_008197961.1:c.[4021-3774A>G]; XP_015839162.1:c.[4105-3774A>G]; XP_008197956.1:c.[4102-3774A>G]; XP_008197959.1:c.[4072-3774A>G]; XP_015839161.1:c.[4105-3774A>G]; XP_008197963.1:c.[3940-3774A>G]; XP_015839168.1:c.[3667-3774A>G]; XP_008197962.1:c.[4021-3774A>G]; XP_008197958.1:c.[4105-3804A>G]; XP_008197964.1:c.[3880-3774A>G]; XP_015839167.1:c.[3727-3774A>G]; XP_008197955.1:c.[4105-3774A>G]; XP_008197953.1:c.[4105-3774A>G]; XP_015839164.1:c.[3892-3774A>G]; XP_008197960.1:c.[4024-3774A>G]; XP_015839165.1:c.[3811-3774A>G]; XP_015839160.1:c.[4105-3774A>G]; XP_008197949.1:c.[6556A>G]","XP_008197949.1:p.Met2186Val","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1640,"NC_007424.3",10673708,"SNV","T","A","Heterozygous",13,23,56.52,1,7,6,0.46,38.85,13,23,8,11,-0.59,0.83,0.95,"no","A/T","No",1,66.24,"XP_015839162.1:c.[4105-3778A>T]; XP_015839160.1:c.[4105-3778A>T]; XP_008197957.1:c.[4084-3778A>T]; XP_008197962.1:c.[4021-3778A>T]; XP_015839167.1:c.[3727-3778A>T]; XP_015839163.1:c.[4069-3778A>T]; XP_008197963.1:c.[3940-3778A>T]; XP_015839164.1:c.[3892-3778A>T]; XP_015839161.1:c.[4105-3778A>T]; XP_008197960.1:c.[4024-3778A>T]; XP_015839166.1:c.[3808-3778A>T]; XP_008197956.1:c.[4102-3778A>T]; XP_008197961.1:c.[4021-3778A>T]; XP_008197955.1:c.[4105-3778A>T]; XP_008197959.1:c.[4072-3778A>T]; XP_008197958.1:c.[4105-3808A>T]; XP_008197949.1:c.[6552A>T]; XP_008197953.1:c.[4105-3778A>T]; XP_015839165.1:c.[3811-3778A>T]; XP_015839168.1:c.[3667-3778A>T]; XP_008197964.1:c.[3880-3778A>T]","XP_008197949.1:p.Lys2184Asn","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1641,"NC_007424.3",10673946,"SNV","C","T","Homozygous",25,25,100,1,17,9,0.35,39.08,26,26,13,19,null,1,1,"no","T/T","No",1,96.74,"XP_015839161.1:c.[4105-4016G>A]; XP_015839166.1:c.[3808-4016G>A]; XP_008197957.1:c.[4084-4016G>A]; XP_015839162.1:c.[4105-4016G>A]; XP_015839168.1:c.[3667-4016G>A]; XP_008197960.1:c.[4024-4016G>A]; XP_015839160.1:c.[4105-4016G>A]; XP_015839167.1:c.[3727-4016G>A]; XP_008197963.1:c.[3940-4016G>A]; XP_008197964.1:c.[3880-4016G>A]; XP_015839165.1:c.[3811-4016G>A]; XP_008197958.1:c.[4105-4046G>A]; XP_008197956.1:c.[4102-4016G>A]; XP_015839164.1:c.[3892-4016G>A]; XP_008197953.1:c.[4105-4016G>A]; XP_008197962.1:c.[4021-4016G>A]; XP_008197949.1:c.[6314G>A]; XP_015839163.1:c.[4069-4016G>A]; XP_008197959.1:c.[4072-4016G>A]; XP_008197955.1:c.[4105-4016G>A]; XP_008197961.1:c.[4021-4016G>A]","XP_008197949.1:p.Gly2105Asp","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1642,"NC_007424.3","10675156..10675157","MNV","CC","AT","Heterozygous",11,20,55,1,6,5,0.45,40.41,11,20,6,6,null,0.56,0.95,"no","complex","No",1,200,"XP_015839165.1:c.[3810+5196_3810+5197delGGinsAT]; XP_008197956.1:c.[4101+5196_4101+5197delGGinsAT]; XP_008197959.1:c.[4071+5196_4071+5197delGGinsAT]; XP_008197961.1:c.[4020+5196_4020+5197delGGinsAT]; XP_015839167.1:c.[3726+5196_3726+5197delGGinsAT]; XP_008197962.1:c.[4020+5196_4020+5197delGGinsAT]; XP_008197953.1:c.[4104+5196_4104+5197delGGinsAT]; XP_015839168.1:c.[3666+5196_3666+5197delGGinsAT]; XP_015839163.1:c.[4068+5196_4068+5197delGGinsAT]; XP_008197955.1:c.[4104+5196_4104+5197delGGinsAT]; XP_015839162.1:c.[4104+5196_4104+5197delGGinsAT]; XP_008197957.1:c.[4083+5196_4083+5197delGGinsAT]; XP_008197949.1:c.[5103_5104delGGinsAT]; XP_008197960.1:c.[4023+5196_4023+5197delGGinsAT]; XP_015839164.1:c.[3891+5196_3891+5197delGGinsAT]; XP_015839160.1:c.[4104+5196_4104+5197delGGinsAT]; XP_015839161.1:c.[4104+5196_4104+5197delGGinsAT]; XP_008197963.1:c.[3939+5196_3939+5197delGGinsAT]; XP_008197964.1:c.[3879+5196_3879+5197delGGinsAT]; XP_008197958.1:c.[4104+5196_4104+5197delGGinsAT]; XP_015839166.1:c.[3807+5196_3807+5197delGGinsAT]","XP_008197949.1:p.Val1702Leu","LOC655385",655385,null,"655385 [Gene Symbol: LOC655385] [Locus Tag: TcasGA2_TC011964] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC655385; TcasGA2_TC011964"]
[1645,"NC_007424.3",10969689,"SNV","G","T","Homozygous",21,21,100,1,8,15,0.35,36.86,23,23,11,13,null,1,1,"no","T/T","No",1,84.7,"XP_008197974.1:c.[4323G>T]; XP_015838967.1:c.[4323G>T]; XP_015838965.1:c.[4323G>T]; XP_015838964.1:c.[4323G>T]; XP_015838966.1:c.[4323G>T]","XP_008197974.1:p.[Arg1441Ser]; XP_015838967.1:p.[Arg1441Ser]; XP_015838965.1:p.[Arg1441Ser]; XP_015838964.1:p.[Arg1441Ser]; XP_015838966.1:p.[Arg1441Ser]","LOC655795, LOC656624","655795 , 656624","5-hydroxytryptamine receptor","655795 [Gene Symbol: LOC655795] [Locus Tag: TcasGA2_TC011960] [Chromosome: LG9] [Map Location: ] [Description: 5-hydroxytryptamine receptor] [Gene Type: protein-coding] || 656624 [Gene Symbol: LOC656624] [Locus Tag: TcasGA2_TC012521] [Chromosome: LG9] [Map Location: ] [Description: protocadherin-like wing polarity protein stan] [Gene Type: protein-coding]","TcasGA2_TC011960; LOC655795 || TcasGA2_TC012521; LOC656624; stan"]
[1646,"NC_007424.3",10975196,"SNV","T","G","Homozygous",21,21,100,1,13,12,0.48,37.14,25,25,13,15,null,1,1,"no","G/G","No",1,83.1,"XP_008197974.1:c.[7694T>G]; XP_015838964.1:c.[7694T>G]; XP_015838967.1:c.[7694T>G]; XP_015838965.1:c.[7694T>G]; XP_015838966.1:c.[7694T>G]","XP_008197974.1:p.[Val2565Gly]; XP_015838964.1:p.[Val2565Gly]; XP_015838967.1:p.[Val2565Gly]; XP_015838965.1:p.[Val2565Gly]; XP_015838966.1:p.[Val2565Gly]","LOC655795, LOC656624","655795 , 656624","5-hydroxytryptamine receptor","655795 [Gene Symbol: LOC655795] [Locus Tag: TcasGA2_TC011960] [Chromosome: LG9] [Map Location: ] [Description: 5-hydroxytryptamine receptor] [Gene Type: protein-coding] || 656624 [Gene Symbol: LOC656624] [Locus Tag: TcasGA2_TC012521] [Chromosome: LG9] [Map Location: ] [Description: protocadherin-like wing polarity protein stan] [Gene Type: protein-coding]","TcasGA2_TC011960; LOC655795 || TcasGA2_TC012521; LOC656624; stan"]
[1649,"NC_007424.3",10985052,"SNV","C","T","Homozygous",23,23,100,1,13,13,0.5,36.04,26,26,15,15,null,1,1,"no","T/T","No",1,90.72,"XP_015838972.1:c.1462G>A","XP_015838972.1:p.Ala488Thr","LOC656787",656787,null,"656787 [Gene Symbol: LOC656787] [Locus Tag: TcasGA2_TC011954] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC656787] [Gene Type: protein-coding]","LOC656787; TcasGA2_TC011954"]
[1650,"NC_007424.3",11010684,"SNV","C","G","Homozygous",24,24,100,1,19,10,0.34,37.54,29,29,15,17,null,1,1,"no","G/G","No",1,92.13,"XP_015838978.1:c.87C>G","XP_015838978.1:p.Asn29Lys","LOC656236, LOC103314256","656236 , 103314256",null,"656236 [Gene Symbol: LOC656236] [Locus Tag: TcasGA2_TC011953] [Chromosome: LG9] [Map Location: ] [Description: macrophage erythroblast attacher] [Gene Type: protein-coding] || 103314256 [Gene Symbol: LOC103314256] [Locus Tag: TcasGA2_TC012525] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314256] [Gene Type: protein-coding]","LOC656236; TcasGA2_TC011953 || TcasGA2_TC012525; LOC103314256"]
[1651,"NC_007424.3",11031504,"SNV","C","T","Heterozygous",11,23,47.83,1,5,6,0.45,37.55,11,23,5,5,0.18,0.22,0.5,"no","C/T","No",1,88.66,"XP_969136.1:c.1025C>T","XP_969136.1:p.Pro342Leu","LOC656236, LOC657592","656236 , 657592",null,"656236 [Gene Symbol: LOC656236] [Locus Tag: TcasGA2_TC011953] [Chromosome: LG9] [Map Location: ] [Description: macrophage erythroblast attacher] [Gene Type: protein-coding] || 657592 [Gene Symbol: LOC657592] [Locus Tag: TcasGA2_TC012530] [Chromosome: LG9] [Map Location: ] [Description: aminoacylase-1] [Gene Type: protein-coding]","LOC656236; TcasGA2_TC011953 || LOC657592; TcasGA2_TC012530"]
[1652,"NC_007424.3",11092146,"SNV","C","A","Homozygous",21,21,100,1,7,16,0.3,38.52,23,23,12,11,null,1,1,"no","A/A","No",1,84.69,"XP_015838876.1:c.[1807+1002C>A]; XP_015838886.1:c.[1802-319C>A]; XP_015838909.1:c.[1822C>A]; XP_015838894.1:c.[1801+1002C>A]; XP_015838892.1:c.[1801+1002C>A]; XP_015838883.1:c.[1804+1002C>A]; XP_015838902.1:c.[1801+1002C>A]; XP_015838910.1:c.[1804+1002C>A]; XP_015838882.1:c.[1804+1002C>A]; XP_015838899.1:c.[1801+1002C>A]; XP_015838880.1:c.[1804+1002C>A]; XP_015838874.1:c.[1807+1002C>A]; XP_015838919.1:c.[2086+49C>A]; XP_015838893.1:c.[1801+1002C>A]; XP_015838901.1:c.[1801+1002C>A]; XP_015838908.1:c.[1801+1002C>A]; XP_015838904.1:c.[2086+49C>A]; XP_015838900.1:c.[1816C>A]; XP_015838918.1:c.[1801+1002C>A]; XP_015838916.1:c.[1801+1002C>A]; XP_015838922.1:c.[1802-319C>A]; XP_015838879.1:c.[1804+1002C>A]; XP_015838907.1:c.[1798+1002C>A]; XP_015838884.1:c.[1804+1002C>A]; XP_015838903.1:c.[2086+49C>A]; XP_015838897.1:c.[1801+1002C>A]; XP_015838881.1:c.[1804+1002C>A]; XP_015838912.1:c.[1801+1002C>A]; XP_015838895.1:c.[2089+49C>A]; XP_015838885.1:c.[1804+1002C>A]; XP_015838891.1:c.[1801+1002C>A]; XP_015838915.1:c.[1801+1002C>A]; XP_015838878.1:c.[1805-319C>A]; XP_015838888.1:c.[1801+1002C>A]; XP_015838921.1:c.[1801+1002C>A]; XP_015838911.1:c.[1801+1002C>A]; XP_015838890.1:c.[1801+1002C>A]; XP_015838889.1:c.[1816C>A]; XP_015838873.1:c.[1810+1002C>A]; XP_015838877.1:c.[1807+1002C>A]; XP_015838920.1:c.[1816C>A]; XP_015838906.1:c.[2086+49C>A]; XP_015838917.1:c.[1816C>A]; NP_001107841.1:c.[1816C>A]; XP_015838896.1:c.[1801+1002C>A]; XP_015838875.1:c.[1807+1002C>A]; XP_015838913.1:c.[2089+49C>A]; XP_015838898.1:c.[1801+1002C>A]; XP_015838914.1:c.[1816C>A]; XP_015838905.1:c.[1801+1002C>A]; XP_015838887.1:c.[1801+1002C>A]","XP_015838909.1:p.[Leu608Ile]; XP_015838900.1:p.[Leu606Ile]; XP_015838889.1:p.[Leu606Ile]; XP_015838920.1:p.[Leu606Ile]; XP_015838917.1:p.[Leu606Ile]; NP_001107841.1:p.[Leu606Ile]; XP_015838914.1:p.[Leu606Ile]","Dscam",652946,"Down syndrome cell adhesion molecule","652946 [Gene Symbol: Dscam] [Locus Tag: TcasGA2_TC012539] [Chromosome: LG9] [Map Location: ] [Description: Down syndrome cell adhesion molecule] [Gene Type: protein-coding]","TcasGA2_TC012539; Dscam"]
[1654,"NC_007424.3",11196258,"SNV","G","C","Homozygous",21,21,100,1,6,18,0.25,38,24,24,10,11,null,1,1,"no","C/C","No",1,83.12,"XP_015839343.1:c.86G>C","XP_015839343.1:p.Ser29Thr","LOC659199",659199,null,"659199 [Gene Symbol: LOC659199] [Locus Tag: TcasGA2_TC012544] [Chromosome: LG9] [Map Location: ] [Description: tetratricopeptide repeat protein 8] [Gene Type: protein-coding]","LOC659199; TcasGA2_TC012544"]
[1655,"NC_007424.3",11200063,"SNV","G","A","Heterozygous",11,21,52.38,1,8,4,0.33,37,12,22,8,9,-1.02,0.99,0.98,"no","A/G","No",1,82.51,"XP_015839343.1:c.1288G>A","XP_015839343.1:p.Ala430Thr","LOC659199",659199,null,"659199 [Gene Symbol: LOC659199] [Locus Tag: TcasGA2_TC012544] [Chromosome: LG9] [Map Location: ] [Description: tetratricopeptide repeat protein 8] [Gene Type: protein-coding]","LOC659199; TcasGA2_TC012544"]
[1657,"NC_007424.3",11293114,"SNV","T","C","Heterozygous",10,20,50,1,2,9,0.18,38.2,11,23,6,6,-0.15,0.67,1,"no","C/T","No",1,81.95,"XP_015839051.1:c.[3857T>C]; XP_015839050.1:c.[3857T>C]","XP_015839051.1:p.[Val1286Ala]; XP_015839050.1:p.[Val1286Ala]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1658,"NC_007424.3",11299373,"SNV","A","C","Homozygous",21,21,100,1,16,5,0.24,38.81,21,21,10,14,null,1,1,"no","C/C","No",1,83.13,"XP_015839051.1:c.[5322A>C]; XP_015839050.1:c.[5325A>C]","XP_015839051.1:p.[Lys1774Asn]; XP_015839050.1:p.[Lys1775Asn]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1659,"NC_007424.3",11433239,"SNV","A","G","Homozygous",21,21,100,1,17,8,0.32,35.29,25,25,10,11,null,1,1,"no","G/G","No",1,83.1,"XP_015839300.1:c.[1465T>C]; XP_015839305.1:c.[1465T>C]; XP_015839304.1:c.[1273T>C]; XP_015839303.1:c.[1423T>C]; XP_015839306.1:c.[1465T>C]; XP_015839301.1:c.[1465T>C]; XP_015839302.1:c.[1465T>C]","XP_015839300.1:p.[Ser489Pro]; XP_015839305.1:p.[Ser489Pro]; XP_015839304.1:p.[Ser425Pro]; XP_015839303.1:p.[Ser475Pro]; XP_015839306.1:p.[Ser489Pro]; XP_015839301.1:p.[Ser489Pro]; XP_015839302.1:p.[Ser489Pro]","LOC660562",660562,null,"660562 [Gene Symbol: LOC660562] [Locus Tag: TcasGA2_TC011933] [Chromosome: LG9] [Map Location: ] [Description: rho GTPase-activating protein 100F] [Gene Type: protein-coding]","LOC660562; TcasGA2_TC011933"]
[1664,"NC_007424.3",11655747,"SNV","C","T","Heterozygous",15,27,55.56,1,3,12,0.2,38.4,15,29,6,8,-0.37,0.84,1,"no","C/T","No",1,91.75,"XP_008198048.1:c.[1280G>A]; XP_008198047.1:c.[1280G>A]","XP_008198048.1:p.[Ser427Asn]; XP_008198047.1:p.[Ser427Asn]","LOC662279",662279,null,"662279 [Gene Symbol: LOC662279] [Locus Tag: TcasGA2_TC011918] [Chromosome: LG9] [Map Location: ] [Description: type I inositol 1,4,5-trisphosphate 5-phosphatase] [Gene Type: protein-coding]","TcasGA2_TC011918; LOC662279"]
[1667,"NC_007424.3",11751543,"SNV","T","G","Heterozygous",9,22,40.91,1,5,4,0.44,38.22,9,22,6,7,0.47,0.34,0.78,"no","G/T","No",1,66.81,"XP_973953.2:c.22T>G","XP_973953.2:p.Phe8Val","LOC662783",662783,null,"662783 [Gene Symbol: LOC662783] [Locus Tag: TcasGA2_TC012587] [Chromosome: LG9] [Map Location: ] [Description: probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial] [Gene Type: protein-coding]","LOC662783; TcasGA2_TC012587"]
[1668,"NC_007424.3",11955436,"SNV","A","G","Homozygous",22,22,100,1,9,13,0.41,37.86,22,22,11,15,null,1,1,"no","G/G","No",1,86.11,"XP_008198080.1:c.[2942T>C]; XP_974291.2:c.[2720T>C]","XP_008198080.1:p.[Leu981Pro]; XP_974291.2:p.[Leu907Pro]","LOC663138",663138,null,"663138 [Gene Symbol: LOC663138] [Locus Tag: TcasGA2_TC030617] [Chromosome: LG9] [Map Location: ] [Description: phosphatidylinositide phosphatase SAC2] [Gene Type: protein-coding]","TcasGA2_TC030617; LOC663138"]
[1669,"NC_007424.3",11965476,"SNV","A","G","Heterozygous",9,23,39.13,1,5,4,0.44,37.67,9,23,6,7,0.41,0.69,1,"no","A/G","No",1,64.47,"XP_008198081.1:c.106A>G","XP_008198081.1:p.Met36Val","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1670,"NC_007424.3",11965561,"SNV","A","G","Homozygous",30,30,100,1,20,13,0.39,37.47,33,33,16,19,null,1,1,"no","G/G","No",1,110.18,"XP_008198081.1:c.142A>G","XP_008198081.1:p.Ile48Val","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1671,"NC_007424.3",11965673,"SNV","C","G","Homozygous",22,22,100,1,10,13,0.43,38,23,23,11,13,null,1,1,"no","G/G","No",1,86.11,"XP_008198081.1:c.254C>G","XP_008198081.1:p.Thr85Ser","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1672,"NC_007424.3",11965682,"SNV","A","C","Homozygous",22,22,100,1,12,14,0.46,37.95,26,26,12,13,null,1,1,"no","C/C","No",1,86.14,"XP_008198081.1:c.263A>C","XP_008198081.1:p.Lys88Thr","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1673,"NC_007424.3",11965694,"SNV","T","C","Heterozygous",21,30,70,1,12,11,0.48,38.31,23,35,13,16,null,0.8,1,"no","complex","No",1,200,"XP_008198081.1:c.275T>C","XP_008198081.1:p.Met92Thr","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1674,"NC_007424.3","11965694..11965695","MNV","TG","CA","Heterozygous",9,30,30,1,5,7,0.42,35.77,12,35,6,7,null,0.66,0.97,"no","complex","No",1,200,"XP_008198081.1:c.275_276delTGinsCA","XP_008198081.1:p.Met92Thr","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1675,"NC_007424.3",11965735,"SNV","A","G","Heterozygous",19,29,65.52,1,15,5,0.25,38,20,32,11,13,-0.76,0.54,0.57,"no","complex","No",1,200,"XP_008198081.1:c.316A>G","XP_008198081.1:p.Ile106Val","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1677,"NC_007424.3",11965870,"SNV","T","G","Homozygous",33,33,100,1,14,20,0.41,38.39,34,34,19,19,null,1,1,"no","G/G","No",1,119.22,"XP_008198081.1:c.402T>G","XP_008198081.1:p.Asp134Glu","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1681,"NC_007424.3",12141425,"SNV","C","A","Heterozygous",10,21,47.62,1,8,2,0.2,35.5,10,22,7,8,-1.2,0.35,0.89,"no","A/C","No",1,78.06,"XP_974410.1:c.64G>T","XP_974410.1:p.Ala22Ser","LOC663261",663261,null,"663261 [Gene Symbol: LOC663261] [Locus Tag: TcasGA2_TC011896] [Chromosome: LG9] [Map Location: ] [Description: probable 28S rRNA (cytosine-C(5))-methyltransferase] [Gene Type: protein-coding]","TcasGA2_TC011896; LOC663261"]
[1683,"NC_007424.3",12143167,"SNV","A","G","Homozygous",20,20,100,1,9,12,0.43,36.4,21,21,12,12,null,1,1,"no","G/G","No",1,80.09,"XP_008198085.1:c.[686T>C]; XP_008198086.1:c.[779T>C]; XP_008198084.1:c.[779T>C]","XP_008198085.1:p.[Val229Ala]; XP_008198086.1:p.[Val260Ala]; XP_008198084.1:p.[Val260Ala]","LOC663280",663280,null,"663280 [Gene Symbol: LOC663280] [Locus Tag: TcasGA2_TC011895] [Chromosome: LG9] [Map Location: ] [Description: probable receptor-like protein kinase At5g18500] [Gene Type: protein-coding]","TcasGA2_TC011895; LOC663280"]
[1684,"NC_007424.3",12143185,"SNV","G","A","Heterozygous",8,20,40,1,6,3,0.33,37.25,9,21,5,6,0.62,0.82,0.64,"no","A/G","No",1,59.06,"XP_008198086.1:c.[761C>T]; XP_008198085.1:c.[668C>T]; XP_008198084.1:c.[761C>T]","XP_008198086.1:p.[Ala254Val]; XP_008198085.1:p.[Ala223Val]; XP_008198084.1:p.[Ala254Val]","LOC663280",663280,null,"663280 [Gene Symbol: LOC663280] [Locus Tag: TcasGA2_TC011895] [Chromosome: LG9] [Map Location: ] [Description: probable receptor-like protein kinase At5g18500] [Gene Type: protein-coding]","TcasGA2_TC011895; LOC663280"]
[1685,"NC_007424.3","12195962..12195963","MNV","GC","CA","Heterozygous",11,23,47.83,1,11,0,0,35.05,11,24,6,9,-3.31,0.11,0.55,"no","complex","No",1,200,"XP_008198101.1:c.[2385_2386delGCinsCA]; XP_015839035.1:c.[2385_2386delGCinsCA]; XP_008198103.1:c.[2385_2386delGCinsCA]","XP_008198101.1:p.[Pro796Thr]; XP_015839035.1:p.[Pro796Thr]; XP_008198103.1:p.[Pro796Thr]","LOC663427",663427,null,"663427 [Gene Symbol: LOC663427] [Locus Tag: TcasGA2_TC012616] [Chromosome: LG9] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase N2] [Gene Type: protein-coding]","LOC663427; TcasGA2_TC012616"]
[1686,"NC_007424.3",12225989,"SNV","T","A","Heterozygous",12,21,57.14,1,9,3,0.25,36.83,12,21,9,8,-1.42,0.86,0.96,"no","A/T","No",1,69.03,"XP_015838956.1:c.578A>T","XP_015838956.1:p.Gln193Leu","LOC103314281",103314281,null,"103314281 [Gene Symbol: LOC103314281] [Locus Tag: TcasGA2_TC011887] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314281] [Gene Type: protein-coding]","TcasGA2_TC011887; LOC103314281"]
[1687,"NC_007424.3",12227739,"SNV","C","G","Homozygous",21,21,100,1,6,18,0.25,36.57,24,24,12,13,null,1,1,"no","G/G","No",1,83.1,"XP_974756.1:c.44C>G","XP_974756.1:p.Thr15Ser","LOC663625",663625,null,"663625 [Gene Symbol: LOC663625] [Locus Tag: TcasGA2_TC012624] [Chromosome: LG9] [Map Location: ] [Description: transmembrane emp24 domain-containing protein A] [Gene Type: protein-coding]","TcasGA2_TC012624; LOC663625"]
[1688,"NC_007424.3",12235240,"SNV","G","A","Heterozygous",11,21,52.38,1,6,5,0.45,37.36,11,21,5,8,-1.55,0.78,0.99,"no","A/G","No",1,82.51,"XP_008198112.1:c.[1045C>T]; XP_008198111.1:c.[1045C>T]","XP_008198112.1:p.[Pro349Ser]; XP_008198111.1:p.[Pro349Ser]","LOC663644",663644,null,"663644 [Gene Symbol: LOC663644] [Locus Tag: TcasGA2_TC011886] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663644] [Gene Type: protein-coding]","LOC663644; TcasGA2_TC011886"]
[1690,"NC_007424.3","12248494..12248496","Deletion","TGG","-","Heterozygous",11,27,40.74,1,5,7,0.42,39,12,30,8,8,0.04,0.55,1,"no","complex","No",1,200,"XP_015839057.1:c.[3795_3797delCCA]; XP_974847.2:c.[3798_3800delCCA]","XP_015839057.1:p.[His1265del]; XP_974847.2:p.[His1266del]","LOC663720",663720,null,"663720 [Gene Symbol: LOC663720] [Locus Tag: TcasGA2_TC034408] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663720] [Gene Type: protein-coding]","TcasGA2_TC034408; LOC663720"]
[1692,"NC_007424.3",12251632,"SNV","T","G","Heterozygous",10,27,37.04,1,3,7,0.3,40.9,10,29,4,5,2.59,0.31,0.75,"no","G/T","No",1,65.65,"XP_974847.2:c.[854A>C]; XP_015839057.1:c.[851A>C]","XP_974847.2:p.[Lys285Thr]; XP_015839057.1:p.[Lys284Thr]","LOC663720",663720,null,"663720 [Gene Symbol: LOC663720] [Locus Tag: TcasGA2_TC034408] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663720] [Gene Type: protein-coding]","TcasGA2_TC034408; LOC663720"]
[1693,"NC_007424.3",12251879,"SNV","T","G","Heterozygous",13,26,50,1,11,8,0.42,37.92,19,34,4,7,2.49,0.68,1,"no","G/T","No",1,101.27,"XP_015839057.1:c.[644A>C]; XP_974847.2:c.[647A>C]","XP_015839057.1:p.[Asn215Thr]; XP_974847.2:p.[Asn216Thr]","LOC663720",663720,null,"663720 [Gene Symbol: LOC663720] [Locus Tag: TcasGA2_TC034408] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663720] [Gene Type: protein-coding]","TcasGA2_TC034408; LOC663720"]
[1694,"NC_007424.3",12348718,"SNV","T","A","Homozygous",20,20,100,1,9,14,0.39,37.95,23,23,11,11,null,1,1,"no","A/A","No",1,81.69,"XP_015839062.1:c.[144+17694T>A]; XP_008198168.2:c.[160A>T]; XP_015839061.1:c.[144+17694T>A]","XP_008198168.2:p.Thr54Ser","LOC655549, LOC654950","655549 , 654950",null,"655549 [Gene Symbol: LOC655549] [Locus Tag: TcasGA2_TC012639] [Chromosome: LG9] [Map Location: ] [Description: nitric oxide synthase, salivary gland] [Gene Type: protein-coding] || 654950 [Gene Symbol: LOC654950] [Locus Tag: TcasGA2_TC011873] [Chromosome: LG9] [Map Location: ] [Description: integrin alpha-PS3] [Gene Type: protein-coding]","LOC655549; TcasGA2_TC012639 || TcasGA2_TC011873; LOC654950"]
[1695,"NC_007424.3",12388903,"SNV","C","T","Homozygous",23,23,100,1,14,10,0.42,37.39,24,24,10,16,null,1,1,"no","T/T","No",1,90.72,"XP_015839062.1:c.[145-19363C>T]; XP_008198172.2:c.[190G>A]; XP_015839061.1:c.[145-19363C>T]","XP_008198172.2:p.Asp64Asn","LOC655549, LOC103314302","655549 , 103314302",null,"655549 [Gene Symbol: LOC655549] [Locus Tag: TcasGA2_TC012639] [Chromosome: LG9] [Map Location: ] [Description: nitric oxide synthase, salivary gland] [Gene Type: protein-coding] || 103314302 [Gene Symbol: LOC103314302] [Locus Tag: TcasGA2_TC011868] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314302] [Gene Type: protein-coding]","LOC655549; TcasGA2_TC012639 || LOC103314302; TcasGA2_TC011868"]
[1696,"NC_007424.3",12388905,"SNV","G","T","Homozygous",22,22,100,1,14,9,0.39,37.86,23,23,10,15,null,1,1,"no","T/T","No",1,87.71,"XP_015839062.1:c.[145-19361G>T]; XP_015839061.1:c.[145-19361G>T]; XP_008198172.2:c.[188C>A]","XP_008198172.2:p.Thr63Asn","LOC655549, LOC103314302","655549 , 103314302",null,"655549 [Gene Symbol: LOC655549] [Locus Tag: TcasGA2_TC012639] [Chromosome: LG9] [Map Location: ] [Description: nitric oxide synthase, salivary gland] [Gene Type: protein-coding] || 103314302 [Gene Symbol: LOC103314302] [Locus Tag: TcasGA2_TC011868] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314302] [Gene Type: protein-coding]","LOC655549; TcasGA2_TC012639 || LOC103314302; TcasGA2_TC011868"]
[1697,"NC_007424.3",12426520,"SNV","T","C","Heterozygous",9,21,42.86,1,2,7,0.22,37.44,9,22,5,7,-0.39,0.87,0.86,"no","C/T","No",1,70.16,"XP_015839064.1:c.[368A>G]; XP_015839063.1:c.[368A>G]","XP_015839064.1:p.[Lys123Arg]; XP_015839063.1:p.[Lys123Arg]","LOC655706",655706,null,"655706 [Gene Symbol: LOC655706] [Locus Tag: TcasGA2_TC011863] [Chromosome: LG9] [Map Location: LG9|LG9] [Description: 23 kDa integral membrane protein] [Gene Type: protein-coding]","TcasGA2_TC011863; LOC655706"]
[1698,"NC_007424.3",12449571,"SNV","G","C","Homozygous",22,22,100,1,13,9,0.41,37.82,22,22,13,11,null,1,1,"no","C/C","No",1,86.14,"XP_015838989.1:c.368G>C","XP_015838989.1:p.Gly123Ala","LOC103314289",103314289,null,"103314289 [Gene Symbol: LOC103314289] [Locus Tag: TcasGA2_TC012642] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314289] [Gene Type: protein-coding]","TcasGA2_TC012642; LOC103314289"]
[1699,"NC_007424.3",12455559,"SNV","A","C","Homozygous",23,23,100,1,18,5,0.22,37.78,23,23,15,15,null,1,1,"no","C/C","No",1,89.15,"XP_008198183.1:c.[333A>C]; XP_008198184.1:c.[333A>C]; XP_008198185.1:c.[333A>C]","XP_008198183.1:p.[Gln111His]; XP_008198184.1:p.[Gln111His]; XP_008198185.1:p.[Gln111His]","LOC656293",656293,null,"656293 [Gene Symbol: LOC656293] [Locus Tag: TcasGA2_TC012644] [Chromosome: LG9] [Map Location: ] [Description: tetraspanin-33] [Gene Type: protein-coding]","LOC656293; TcasGA2_TC012644"]
[1700,"NC_007424.3",12475066,"SNV","A","C","Heterozygous",11,28,39.29,1,5,8,0.38,38.73,13,30,6,8,1.43,0.45,0.83,"no","A/C","No",1,75.81,"XP_008198146.1:c.[2478A>C]; XP_015839202.1:c.[2478A>C]","XP_008198146.1:p.[Glu826Asp]; XP_015839202.1:p.[Glu826Asp]","LOC103314292",103314292,null,"103314292 [Gene Symbol: LOC103314292] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314292] [Gene Type: protein-coding]","LOC103314292"]
[1701,"NC_007424.3",12578983,"SNV","A","G","Homozygous",20,20,100,1,17,4,0.19,36.8,21,21,10,16,null,1,1,"no","G/G","No",1,80.09,"XP_001810857.1:c.2717A>G","XP_001810857.1:p.Glu906Gly","LOC100142123",100142123,null,"100142123 [Gene Symbol: LOC100142123] [Locus Tag: TcasGA2_TC012655] [Chromosome: LG9] [Map Location: ] [Description: zinc finger protein 271] [Gene Type: protein-coding]","TcasGA2_TC012655; LOC100142123"]
[1702,"NC_007424.3",12616836,"SNV","C","A","Heterozygous",16,27,59.26,1,8,8,0.5,39.56,16,27,9,8,2.37,0.29,0.58,"no","A/C","No",1,78.46,"XP_969864.1:c.351G>T","XP_969864.1:p.Gln117His","LOC658377",658377,null,"658377 [Gene Symbol: LOC658377] [Locus Tag: TcasGA2_TC011845] [Chromosome: LG9] [Map Location: ] [Description: peroxisomal targeting signal 2 receptor] [Gene Type: protein-coding]","LOC658377; TcasGA2_TC011845"]
[1703,"NC_007424.3",12620864,"SNV","A","G","Heterozygous",12,22,54.55,1,7,5,0.42,36.58,12,22,6,7,-0.4,0.89,0.78,"no","A/G","No",1,78.96,"XP_008198149.1:c.3094A>G","XP_008198149.1:p.Ser1032Gly","LOC100141983",100141983,null,"100141983 [Gene Symbol: LOC100141983] [Locus Tag: TcasGA2_TC012658] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141983] [Gene Type: protein-coding]","TcasGA2_TC012658; LOC100141983"]
[1704,"NC_007424.3",12684436,"SNV","G","A","Homozygous",20,20,100,1,11,9,0.45,38.85,20,20,12,14,null,1,1,"no","A/A","No",1,81.69,"XP_008198201.1:c.[328G>A]; XP_970620.1:c.[331G>A]","XP_008198201.1:p.[Gly110Ser]; XP_970620.1:p.[Gly111Ser]","LOC659200",659200,null,"659200 [Gene Symbol: LOC659200] [Locus Tag: TcasGA2_TC012664] [Chromosome: LG9] [Map Location: ] [Description: ran-binding protein 3] [Gene Type: protein-coding]","TcasGA2_TC012664; LOC659200"]
[1705,"NC_007424.3",12809065,"SNV","T","A","Heterozygous",8,22,36.36,1,4,4,0.5,40.5,8,22,3,5,2.15,0.54,0.64,"no","A/T","No",1,53.32,"XP_008198218.2:c.[1604+5627A>T]; XP_008198216.1:c.[2804T>A]; XP_971240.2:c.[2810T>A]; XP_015839087.1:c.[1505+5627A>T]; XP_015839078.1:c.[2810T>A]","XP_008198216.1:p.[Leu935Gln]; XP_971240.2:p.[Leu937Gln]; XP_015839078.1:p.[Leu937Gln]","LOC659943, LOC659880","659943 , 659880",null,"659943 [Gene Symbol: LOC659943] [Locus Tag: TcasGA2_TC011836] [Chromosome: LG9] [Map Location: ] [Description: poly(A)-specific ribonuclease PARN-like domain-containing protein 1] [Gene Type: protein-coding] || 659880 [Gene Symbol: LOC659880] [Locus Tag: TcasGA2_TC012669] [Chromosome: LG9] [Map Location: ] [Description: trafficking protein particle complex subunit 11] [Gene Type: protein-coding]","TcasGA2_TC011836; LOC659943 || LOC659880; TcasGA2_TC012669"]
[1707,"NC_007424.3",13328149,"SNV","T","A","Homozygous",20,20,100,1,11,13,0.46,38.5,24,24,14,12,null,1,1,"no","A/A","No",1,81.69,"XP_008198257.1:c.694A>T","XP_008198257.1:p.Thr232Ser","LOC103314318",103314318,null,"103314318 [Gene Symbol: LOC103314318] [Locus Tag: TcasGA2_TC011807] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314318] [Gene Type: protein-coding]","LOC103314318; TcasGA2_TC011807"]
[1708,"NC_007424.3",13364323,"SNV","C","T","Homozygous",20,20,100,1,14,8,0.36,36.35,22,22,13,15,null,1,1,"no","T/T","No",1,81.7,"XP_008198265.1:c.[1180G>A]; XP_008198266.1:c.[1006G>A]; XP_008198267.1:c.[976G>A]","XP_008198265.1:p.[Val394Ile]; XP_008198266.1:p.[Val336Ile]; XP_008198267.1:p.[Val326Ile]","LOC662355",662355,null,"662355 [Gene Symbol: LOC662355] [Locus Tag: TcasGA2_TC011802] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC662355; TcasGA2_TC011802"]
[1709,"NC_007424.3",13398301,"SNV","T","C","Homozygous",29,29,100,1,11,21,0.34,36.69,32,32,18,18,null,1,1,"no","C/C","No",1,107.2,"XP_008198269.1:c.3038T>C","XP_008198269.1:p.Met1013Thr","LOC662527",662527,null,"662527 [Gene Symbol: LOC662527] [Locus Tag: TcasGA2_TC012700] [Chromosome: LG9] [Map Location: ] [Description: histone-lysine N-methyltransferase NSD2] [Gene Type: protein-coding]","LOC662527; TcasGA2_TC012700"]
[1710,"NC_007424.3",13405623,"SNV","C","G","Homozygous",20,20,100,1,10,13,0.43,35.9,23,23,11,13,null,1,1,"no","G/G","No",1,80.09,"XP_973747.1:c.380G>C","XP_973747.1:p.Gly127Ala","LOC662564",662564,null,"662564 [Gene Symbol: LOC662564] [Locus Tag: TcasGA2_TC011798] [Chromosome: LG9] [Map Location: ] [Description: altered disjunction] [Gene Type: protein-coding]","TcasGA2_TC011798; ald; LOC662564"]
[1711,"NC_007424.3",13405879,"SNV","A","T","Homozygous",34,34,100,1,23,21,0.48,38.03,44,44,17,18,null,1,1,"no","T/T","No",1,123.81,"XP_973747.1:c.124T>A","XP_973747.1:p.Ser42Thr","LOC662564",662564,null,"662564 [Gene Symbol: LOC662564] [Locus Tag: TcasGA2_TC011798] [Chromosome: LG9] [Map Location: ] [Description: altered disjunction] [Gene Type: protein-coding]","TcasGA2_TC011798; ald; LOC662564"]
[1712,"NC_007424.3",13464234,"SNV","T","C","Heterozygous",12,25,48,1,7,7,0.5,38.33,14,30,9,8,-0.9,0.61,0.94,"no","C/T","No",1,97.03,"XP_974030.1:c.712A>G","XP_974030.1:p.Lys238Glu","LOC663060, LOC662862","663060 , 662862",null,"663060 [Gene Symbol: LOC663060] [Locus Tag: TcasGA2_TC012706] [Chromosome: LG9] [Map Location: ] [Description: origin recognition complex subunit 5] [Gene Type: protein-coding] || 662862 [Gene Symbol: LOC662862] [Locus Tag: TcasGA2_TC011793] [Chromosome: LG9] [Map Location: ] [Description: annexin B9] [Gene Type: protein-coding]","TcasGA2_TC012706; LOC663060 || TcasGA2_TC011793; LOC662862"]
[1714,"NC_007424.3",13616485,"SNV","T","G","Homozygous",19,20,95,1,6,16,0.27,38.21,22,24,7,11,null,0.97,1,"no","G/G","No",1,51.61,"XP_008198294.1:c.[1938T>G]; XP_015839119.1:c.[2085T>G]; XP_015839120.1:c.[1938T>G]; XP_974469.1:c.[1938T>G]","XP_008198294.1:p.[Asn646Lys]; XP_015839119.1:p.[Asn695Lys]; XP_015839120.1:p.[Asn646Lys]; XP_974469.1:p.[Asn646Lys]","LOC663321",663321,null,"663321 [Gene Symbol: LOC663321] [Locus Tag: TcasGA2_TC012717] [Chromosome: LG9] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC663321; TcasGA2_TC012717"]
[1715,"NC_007424.3",13619325,"SNV","T","C","Homozygous",20,20,100,1,6,15,0.29,38.6,21,21,14,12,null,1,1,"no","C/C","No",1,80.12,"XP_974469.1:c.[4724T>C]; XP_015839119.1:c.[4871T>C]; XP_008198294.1:c.[4724T>C]; XP_015839120.1:c.[4724T>C]","XP_974469.1:p.[Met1575Thr]; XP_015839119.1:p.[Met1624Thr]; XP_008198294.1:p.[Met1575Thr]; XP_015839120.1:p.[Met1575Thr]","LOC663321",663321,null,"663321 [Gene Symbol: LOC663321] [Locus Tag: TcasGA2_TC012717] [Chromosome: LG9] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC663321; TcasGA2_TC012717"]
[1716,"NC_007424.3",13710398,"SNV","A","T","Homozygous",30,30,100,1,6,26,0.19,36.8,32,32,14,15,null,1,1,"no","T/T","No",1,108.77,"XP_974567.2:c.1270A>T","XP_974567.2:p.Ile424Phe","LOC663428",663428,null,"663428 [Gene Symbol: LOC663428] [Locus Tag: TcasGA2_TC012725] [Chromosome: LG9] [Map Location: ] [Description: guanine nucleotide-binding protein-like 3 homolog] [Gene Type: protein-coding]","LOC663428; TcasGA2_TC012725"]
[1717,"NC_007424.3",13710441,"SNV","A","C","Homozygous",24,24,100,1,9,18,0.33,38.79,27,27,13,15,null,1,1,"no","C/C","No",1,92.15,"XP_974567.2:c.1313A>C","XP_974567.2:p.Glu438Ala","LOC663428",663428,null,"663428 [Gene Symbol: LOC663428] [Locus Tag: TcasGA2_TC012725] [Chromosome: LG9] [Map Location: ] [Description: guanine nucleotide-binding protein-like 3 homolog] [Gene Type: protein-coding]","LOC663428; TcasGA2_TC012725"]
[1718,"NC_007424.3",13713735,"SNV","A","T","Homozygous",26,26,100,1,11,21,0.34,35.38,32,32,11,13,null,1,1,"no","T/T","No",1,99.75,"XP_008198301.1:c.[682A>T]; XP_974584.2:c.[39-1062T>A]; XP_008198300.1:c.[682A>T]","XP_008198301.1:p.[Ser228Cys]; XP_008198300.1:p.[Ser228Cys]","LOC663446, LOC663462","663446 , 663462",null,"663446 [Gene Symbol: LOC663446] [Locus Tag: TcasGA2_TC011773] [Chromosome: LG9] [Map Location: ] [Description: calponin homology domain-containing protein DDB_G0272472] [Gene Type: protein-coding] || 663462 [Gene Symbol: LOC663462] [Locus Tag: TcasGA2_TC012726] [Chromosome: LG9] [Map Location: ] [Description: PR domain zinc finger protein 10] [Gene Type: protein-coding]","TcasGA2_TC011773; LOC663446 || TcasGA2_TC012726; LOC663462"]
[1719,"NC_007424.3",13713962,"SNV","C","G","Homozygous",29,30,96.67,1,12,19,0.39,37.93,31,32,17,18,null,1,1,"no","G/G","No",1,81.42,"XP_008198300.1:c.[848C>G]; XP_974584.2:c.[39-1289G>C]; XP_008198301.1:c.[848C>G]","XP_008198300.1:p.[Thr283Ser]; XP_008198301.1:p.[Thr283Ser]","LOC663446, LOC663462","663446 , 663462",null,"663446 [Gene Symbol: LOC663446] [Locus Tag: TcasGA2_TC011773] [Chromosome: LG9] [Map Location: ] [Description: calponin homology domain-containing protein DDB_G0272472] [Gene Type: protein-coding] || 663462 [Gene Symbol: LOC663462] [Locus Tag: TcasGA2_TC012726] [Chromosome: LG9] [Map Location: ] [Description: PR domain zinc finger protein 10] [Gene Type: protein-coding]","TcasGA2_TC011773; LOC663446 || TcasGA2_TC012726; LOC663462"]
[1720,"NC_007424.3",13716298,"SNV","G","C","Homozygous",25,25,100,1,20,7,0.26,37.52,27,27,12,14,null,1,1,"no","C/C","No",1,95.16,"XP_008198301.1:c.[1317G>C]; XP_008198300.1:c.[1317G>C]","XP_008198301.1:p.[Glu439Asp]; XP_008198300.1:p.[Glu439Asp]","LOC663462",663462,null,"663462 [Gene Symbol: LOC663462] [Locus Tag: TcasGA2_TC012726] [Chromosome: LG9] [Map Location: ] [Description: PR domain zinc finger protein 10] [Gene Type: protein-coding]","TcasGA2_TC012726; LOC663462"]
[1721,"NC_007424.3",13730253,"SNV","A","G","Homozygous",20,20,100,1,18,3,0.14,37.45,21,21,11,14,null,1,1,"no","G/G","No",1,80.09,"XP_008198302.1:c.1957T>C","XP_008198302.1:p.Cys653Arg","LOC663538",663538,null,"663538 [Gene Symbol: LOC663538] [Locus Tag: TcasGA2_TC011770] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663538] [Gene Type: protein-coding]","LOC663538; TcasGA2_TC011770"]
[1722,"NC_007424.3",13856356,"SNV","A","C","Homozygous",26,26,100,1,22,9,0.29,37.77,31,31,16,18,null,1,1,"no","C/C","No",1,98.17,"XP_015839253.1:c.468A>C","XP_015839253.1:p.Lys156Asn","LOC663626",663626,null,"663626 [Gene Symbol: LOC663626] [Locus Tag: TcasGA2_TC012729] [Chromosome: LG9] [Map Location: ] [Description: fumarylacetoacetate hydrolase domain-containing protein 2A] [Gene Type: protein-coding]","LOC663626; TcasGA2_TC012729"]
[1723,"NC_007424.3",13885841,"SNV","G","T","Homozygous",25,25,100,1,22,7,0.24,37.84,29,29,12,15,null,1,1,"no","T/T","No",1,96.73,"NP_001036067.1:c.[1875G>T]; XP_008198138.1:c.[1875G>T]","NP_001036067.1:p.[Glu625Asp]; XP_008198138.1:p.[Glu625Asp]","Cht10",652967,"chitinase 10","652967 [Gene Symbol: Cht10] [Locus Tag: TcasGA2_TC012734] [Chromosome: LG9] [Map Location: ] [Description: chitinase 10] [Gene Type: protein-coding]","Cht10; TcCht10; TcasGA2_TC012734"]
[1724,"NC_007424.3",13886561,"SNV","T","C","Homozygous",21,21,100,1,9,12,0.43,38.76,21,21,9,11,null,1,1,"no","C/C","No",1,83.12,"XP_008198138.1:c.[2459T>C]; NP_001036067.1:c.[2474T>C]","XP_008198138.1:p.[Val820Ala]; NP_001036067.1:p.[Val825Ala]","Cht10",652967,"chitinase 10","652967 [Gene Symbol: Cht10] [Locus Tag: TcasGA2_TC012734] [Chromosome: LG9] [Map Location: ] [Description: chitinase 10] [Gene Type: protein-coding]","Cht10; TcCht10; TcasGA2_TC012734"]
[1725,"NC_007424.3",13897579,"SNV","T","G","Homozygous",23,23,100,1,1,22,0.04,36.74,23,23,12,14,null,1,1,"no","G/G","No",1,89.12,"XP_974863.1:c.[464A>C]; XP_015839110.1:c.[464A>C]; XP_008198309.1:c.[464A>C]; XP_008198310.1:c.[464A>C]","XP_974863.1:p.[Asn155Thr]; XP_015839110.1:p.[Asn155Thr]; XP_008198309.1:p.[Asn155Thr]; XP_008198310.1:p.[Asn155Thr]","LOC663735",663735,null,"663735 [Gene Symbol: LOC663735] [Locus Tag: TcasGA2_TC011759] [Chromosome: LG9] [Map Location: ] [Description: ubiquitin thioesterase trabid] [Gene Type: protein-coding]","LOC663735; TcasGA2_TC011759"]
[1726,"NC_007424.3",13918814,"SNV","C","A","Homozygous",22,22,100,1,19,4,0.17,38.41,23,23,12,15,null,1,1,"no","A/A","No",1,87.71,"XP_008198313.1:c.[922G>T]; XP_015839275.1:c.[877G>T]; XP_008198312.1:c.[922G>T]","XP_008198313.1:p.[Ala308Ser]; XP_015839275.1:p.[Ala293Ser]; XP_008198312.1:p.[Ala308Ser]","LOC663804",663804,null,"663804 [Gene Symbol: LOC663804] [Locus Tag: TcasGA2_TC011754] [Chromosome: LG9] [Map Location: ] [Description: ABC transporter G family member 20] [Gene Type: protein-coding]","LOC663804; TcasGA2_TC011754"]
[1727,"NC_007424.3","14246932..14246933","MNV","GG","AA","Homozygous",17,20,85,1,6,14,0.3,38.56,20,23,13,12,null,0.99,0.95,"no","AA/AA","No",1,200,"XP_008198327.1:c.1902_1903delGGinsAA","XP_008198327.1:p.Val635Ile","LOC664089",664089,null,"664089 [Gene Symbol: LOC664089] [Locus Tag: TcasGA2_TC012753] [Chromosome: LG9] [Map Location: ] [Description: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2] [Gene Type: protein-coding]","LOC664089; TcasGA2_TC012753"]
[1730,"NC_007424.3",14300645,"SNV","T","C","Homozygous",22,22,100,1,14,10,0.42,38.18,24,24,13,18,null,1,1,"no","C/C","No",1,86.14,"XP_008198166.1:c.296T>C","XP_008198166.1:p.Ile99Thr","LOC664131",664131,null,"664131 [Gene Symbol: LOC664131] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort-like] [Gene Type: protein-coding]","LOC664131"]
[1731,"NC_007424.3",14306640,"SNV","A","G","Heterozygous",10,22,45.45,1,1,9,0.1,37.6,10,28,4,6,null,0.68,0.62,"no","complex","No",1,200,"XP_015839207.1:c.[907A>G]; XP_975247.2:c.[793A>G]; XP_015839208.1:c.[907A>G]","XP_015839207.1:p.[Lys303Glu]; XP_975247.2:p.[Lys265Glu]; XP_015839208.1:p.[Lys303Glu]","LOC664140",664140,null,"664140 [Gene Symbol: LOC664140] [Locus Tag: TcasGA2_TC012758] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort] [Gene Type: protein-coding]","TcasGA2_TC012758; LOC664140"]
[1732,"NC_007424.3","14306640..14306641","MNV","AA","GC","Heterozygous",9,22,40.91,1,5,8,0.38,38.11,13,28,6,9,null,0.87,0.93,"no","complex","No",1,200,"XP_015839207.1:c.[907_908delAAinsGC]; XP_015839208.1:c.[907_908delAAinsGC]; XP_975247.2:c.[793_794delAAinsGC]","XP_015839207.1:p.[Lys303Ala]; XP_015839208.1:p.[Lys303Ala]; XP_975247.2:p.[Lys265Ala]","LOC664140",664140,null,"664140 [Gene Symbol: LOC664140] [Locus Tag: TcasGA2_TC012758] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort] [Gene Type: protein-coding]","TcasGA2_TC012758; LOC664140"]
[1733,"NC_007424.3",14320655,"SNV","T","G","Homozygous",25,25,100,1,12,17,0.41,38.48,29,29,17,16,null,1,1,"no","G/G","No",1,95.14,"XP_975266.1:c.304A>C","XP_975266.1:p.Ile102Leu","LOC664159",664159,null,"664159 [Gene Symbol: LOC664159] [Locus Tag: TcasGA2_TC011730] [Chromosome: LG9] [Map Location: ] [Description: enolase] [Gene Type: protein-coding]","LOC664159; TcasGA2_TC011730"]
[1735,"NC_007424.3",14497704,"SNV","T","A","Homozygous",20,20,100,1,9,15,0.38,38.75,24,24,9,12,null,1,1,"no","A/A","No",1,81.69,"XP_008198368.1:c.[1492A>T]; XP_008198370.1:c.[1486A>T]","XP_008198368.1:p.[Ile498Leu]; XP_008198370.1:p.[Ile496Leu]","LOC100142573",100142573,null,"100142573 [Gene Symbol: LOC100142573] [Locus Tag: TcasGA2_TC011724] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100142573] [Gene Type: protein-coding]","LOC100142573; TcasGA2_TC011724"]
[1736,"NC_007424.3",14519794,"SNV","A","T","Heterozygous",11,20,55,1,2,9,0.18,35.82,11,20,6,6,-0.84,0.56,0.75,"no","A/T","No",1,71.65,"XP_008198372.1:c.866T>A","XP_008198372.1:p.Phe289Tyr","LOC655387",655387,null,"655387 [Gene Symbol: LOC655387] [Locus Tag: TcasGA2_TC011723] [Chromosome: LG9] [Map Location: ] [Description: leucine-rich repeat-containing protein 27] [Gene Type: protein-coding]","TcasGA2_TC011723; LOC655387"]
[1737,"NC_007424.3",14556827,"SNV","C","G","Heterozygous",11,21,52.38,1,9,3,0.25,38.91,12,22,6,8,0.42,0.83,0.91,"no","C/G","No",1,81.44,"XP_967927.1:c.975C>G","XP_967927.1:p.Asp325Glu","LOC656294",656294,null,"656294 [Gene Symbol: LOC656294] [Locus Tag: TcasGA2_TC012775] [Chromosome: LG9] [Map Location: ] [Description: DC-STAMP domain-containing protein 1] [Gene Type: protein-coding]","LOC656294; TcasGA2_TC012775"]
[1738,"NC_007424.3",14559176,"SNV","G","T","Homozygous",28,28,100,1,21,11,0.34,37.43,32,32,15,17,null,1,1,"no","T/T","No",1,105.77,"XP_967927.1:c.1905G>T","XP_967927.1:p.Leu635Phe","LOC656294",656294,null,"656294 [Gene Symbol: LOC656294] [Locus Tag: TcasGA2_TC012775] [Chromosome: LG9] [Map Location: ] [Description: DC-STAMP domain-containing protein 1] [Gene Type: protein-coding]","LOC656294; TcasGA2_TC012775"]
[1740,"NC_007424.3",14580934,"SNV","T","C","Homozygous",22,22,100,1,19,5,0.21,38.27,24,24,10,11,null,1,1,"no","C/C","No",1,86.14,"XP_975801.1:c.460A>G","XP_975801.1:p.Thr154Ala","LOC655733",655733,null,"655733 [Gene Symbol: LOC655733] [Locus Tag: TcasGA2_TC011716] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC655733] [Gene Type: protein-coding]","TcasGA2_TC011716; LOC655733"]
[1742,"NC_007424.3",14583511,"SNV","A","C","Heterozygous",8,20,40,1,5,5,0.5,39,10,24,8,7,1.39,0.67,0.91,"no","A/C","No",1,59.77,"XP_008198354.1:c.1779T>G","XP_008198354.1:p.Phe593Leu","LOC103314340",103314340,null,"103314340 [Gene Symbol: LOC103314340] [Locus Tag: TcasGA2_TC011714] [Chromosome: LG9] [Map Location: ] [Description: glutamyl aminopeptidase] [Gene Type: protein-coding]","LOC103314340; TcasGA2_TC011714"]
[1743,"NC_007424.3",14584014,"SNV","C","T","Homozygous",23,23,100,1,16,11,0.41,37.91,27,27,14,17,null,1,1,"no","T/T","No",1,90.72,"XP_008198354.1:c.1364G>A","XP_008198354.1:p.Gly455Glu","LOC103314340",103314340,null,"103314340 [Gene Symbol: LOC103314340] [Locus Tag: TcasGA2_TC011714] [Chromosome: LG9] [Map Location: ] [Description: glutamyl aminopeptidase] [Gene Type: protein-coding]","LOC103314340; TcasGA2_TC011714"]
[1744,"NC_007424.3",14592775,"SNV","A","G","Homozygous",24,24,100,1,14,12,0.46,35.62,26,26,10,17,null,1,1,"no","G/G","No",1,92.12,"XP_968472.1:c.901T>C","XP_968472.1:p.Ser301Pro","LOC656879",656879,null,"656879 [Gene Symbol: LOC656879] [Locus Tag: TcasGA2_TC011713] [Chromosome: LG9] [Map Location: ] [Description: ATP-binding cassette sub-family G member 8] [Gene Type: protein-coding]","LOC656879; TcasGA2_TC011713"]
[1745,"NC_007424.3","14657199^14657200","Insertion","-","TCC","Heterozygous",5,20,25,1,3,3,0.5,35,6,22,4,5,-0.28,0.7,0.82,"no","complex","No",1,200,"XP_969067.1:c.569_570insGGA","XP_969067.1:p.Glu190_Gln191insGlu","LOC657518",657518,null,"657518 [Gene Symbol: LOC657518] [Locus Tag: TcasGA2_TC011708] [Chromosome: LG9] [Map Location: ] [Description: transcription initiation factor IIA subunit 1] [Gene Type: protein-coding]","LOC657518; TcasGA2_TC011708"]
[1746,"NC_007424.3",14859125,"SNV","G","A","Homozygous",26,27,96.3,1,25,1,0.04,38.5,26,27,11,15,null,0.88,1,"no","A/A","No",1,70.65,"XP_008198400.1:c.[2140C>T]; XP_008198401.1:c.[2137C>T]","XP_008198400.1:p.[Leu714Phe]; XP_008198401.1:p.[Leu713Phe]","LOC658153",658153,null,"658153 [Gene Symbol: LOC658153] [Locus Tag: TcasGA2_TC011701] [Chromosome: LG9] [Map Location: ] [Description: Werner syndrome ATP-dependent helicase] [Gene Type: protein-coding]","TcasGA2_TC011701; LOC658153"]
[1748,"NC_007424.3",15019326,"SNV","A","G","Heterozygous",11,21,52.38,1,4,8,0.33,37.09,12,24,7,6,-1.62,0.47,0.95,"no","A/G","No",1,81.61,"XP_970545.1:c.1516A>G","XP_970545.1:p.Ile506Val","LOC659120",659120,null,"659120 [Gene Symbol: LOC659120] [Locus Tag: TcasGA2_TC012795] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC659120] [Gene Type: protein-coding]","LOC659120; TcasGA2_TC012795"]
[1749,"NC_007424.3",15022357,"SNV","A","G","Heterozygous",15,26,57.69,1,10,5,0.33,38.93,15,26,8,6,1.14,0.43,1,"no","A/G","No",1,80.55,"XP_015839269.1:c.1745A>G","XP_015839269.1:p.Asn582Ser","LOC659544, LOC659269","659544 , 659269",null,"659544 [Gene Symbol: LOC659544] [Locus Tag: TcasGA2_TC012797] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC659544] [Gene Type: protein-coding] || 659269 [Gene Symbol: LOC659269] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC659269] [Gene Type: protein-coding]","LOC659544; TcasGA2_TC012797 || LOC659269"]
[1750,"NC_007424.3",15119704,"SNV","A","G","Homozygous",25,25,100,1,11,15,0.42,37.84,26,26,14,16,null,1,1,"no","G/G","No",1,95.14,"XP_008198416.2:c.871A>G","XP_008198416.2:p.Ile291Val","LOC660504",660504,null,"660504 [Gene Symbol: LOC660504] [Locus Tag: TcasGA2_TC012803] [Chromosome: LG9] [Map Location: ] [Description: protein CNPPD1] [Gene Type: protein-coding]","LOC660504; TcasGA2_TC012803"]
[1751,"NC_007424.3",15120286,"SNV","G","C","Heterozygous",11,20,55,1,11,7,0.39,36.55,18,30,9,7,-2.28,0.62,1,"no","C/G","No",1,71.7,"XP_015839116.1:c.[668C>G]; XP_971879.2:c.[674C>G]","XP_015839116.1:p.[Thr223Ser]; XP_971879.2:p.[Thr225Ser]","LOC660564",660564,null,"660564 [Gene Symbol: LOC660564] [Locus Tag: TcasGA2_TC011681] [Chromosome: LG9] [Map Location: ] [Description: probable cytosolic iron-sulfur protein assembly protein Ciao1] [Gene Type: protein-coding]","TcasGA2_TC011681; LOC660564"]
[1752,"NC_007424.3",15463995,"SNV","A","G","Heterozygous",9,20,45,1,7,5,0.42,35.11,12,23,4,5,-2.09,0.29,0.78,"no","A/G","No",1,72.78,"XP_972982.2:c.[2678A>G]; XP_008198510.1:c.[2678A>G]; XP_008198512.1:c.[2165A>G]; XP_008198511.1:c.[2678A>G]","XP_972982.2:p.[Asn893Ser]; XP_008198510.1:p.[Asn893Ser]; XP_008198512.1:p.[Asn722Ser]; XP_008198511.1:p.[Asn893Ser]","LOC661743",661743,null,"661743 [Gene Symbol: LOC661743] [Locus Tag: TcasGA2_TC011612] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC661743] [Gene Type: protein-coding]","TcasGA2_TC011612; LOC661743"]
[1753,"NC_007424.3",15474722,"SNV","C","T","Homozygous",25,25,100,1,11,18,0.38,37.84,29,29,13,16,null,1,1,"no","T/T","No",1,96.73,"XP_008198507.1:c.428C>T","XP_008198507.1:p.Ala143Val","LOC100142140",100142140,null,"100142140 [Gene Symbol: LOC100142140] [Locus Tag: TcasGA2_TC011616] [Chromosome: LG9] [Map Location: ] [Description: inward rectifier potassium channel 2] [Gene Type: protein-coding]","LOC100142140; TcasGA2_TC011616"]
[1754,"NC_007424.3",15491877,"SNV","T","A","Homozygous",21,21,100,1,12,12,0.5,38.52,24,24,13,12,null,1,1,"no","A/A","No",1,84.7,"XP_015839248.1:c.1240A>T","XP_015839248.1:p.Ile414Phe","LOC100142542",100142542,null,"100142542 [Gene Symbol: LOC100142542] [Locus Tag: TcasGA2_TC012862] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100142542] [Gene Type: protein-coding]","LOC100142542; TcasGA2_TC012862"]
[1755,"NC_007424.3",15608961,"SNV","T","C","Homozygous",20,20,100,1,12,15,0.44,37.6,27,27,11,13,null,1,1,"no","C/C","No",1,80.11,"XP_972146.1:c.1513A>G","XP_972146.1:p.Lys505Glu","LOC660850",660850,null,"660850 [Gene Symbol: LOC660850] [Locus Tag: TcasGA2_TC012853] [Chromosome: LG9] [Map Location: ] [Description: matrix metalloproteinase 3] [Gene Type: protein-coding]","TcasGA2_TC012853; LOC660850; Mmp-3"]
[1756,"NC_007424.3",15648388,"SNV","A","G","Homozygous",21,21,100,1,12,10,0.45,36.76,22,22,11,12,null,1,1,"no","G/G","No",1,83.09,"XP_015838961.1:c.3253T>C","XP_015838961.1:p.Cys1085Arg","LOC660320",660320,null,"660320 [Gene Symbol: LOC660320] [Locus Tag: TcasGA2_TC012846] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC660320] [Gene Type: protein-coding]","TcasGA2_TC012846; LOC660320"]
[1760,"NC_007425.3",283047,"SNV","A","G","Homozygous",24,24,100,1,18,9,0.33,37.25,27,27,11,18,null,1,1,"no","G/G","No",1,92.13,"XP_008198554.1:c.[56T>C]; XP_008198553.1:c.[56T>C]","XP_008198554.1:p.[Val19Ala]; XP_008198553.1:p.[Val19Ala]","LOC660862",660862,null,"660862 [Gene Symbol: LOC660862] [Locus Tag: TcasGA2_TC011238] [Chromosome: LG10] [Map Location: ] [Description: ras-related and estrogen-regulated growth inhibitor] [Gene Type: protein-coding]","LOC660862; TcasGA2_TC011238"]
[1763,"NC_007425.3",760248,"SNV","G","C","Homozygous",23,23,100,1,9,19,0.32,37.87,28,28,12,12,null,1,1,"no","C/C","No",1,89.14,"NP_001123894.1:c.782C>G","NP_001123894.1:p.Thr261Arg","Cyp314a1",661451,"cytochrome P450 CYP314A1","661451 [Gene Symbol: Cyp314a1] [Locus Tag: TcasGA2_TC011231] [Chromosome: LG10] [Map Location: ] [Description: cytochrome P450 CYP314A1] [Gene Type: protein-coding]","TcasGA2_TC011231; Cyp314a1"]
[1765,"NC_007425.3",1679265,"SNV","G","C","Heterozygous",16,43,37.21,1,8,10,0.44,38.19,18,47,7,9,1.27,0.97,1,"no","C/G","No",1,101.55,"XP_015839388.1:c.585C>G","XP_015839388.1:p.Phe195Leu","LOC107398730",107398730,null,"107398730 [Gene Symbol: LOC107398730] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398730] [Gene Type: protein-coding]","LOC107398730"]
[1766,"NC_007425.3","1729441..1729442","MNV","TA","AT","Heterozygous",9,36,25,1,3,6,0.33,40.5,9,38,6,4,1.3,0.14,0.73,"no","complex","No",1,200,"XP_015839406.1:c.605_606delTAinsAT","XP_015839406.1:p.Ile202Asn","LOC103314713",103314713,null,"103314713 [Gene Symbol: LOC103314713] [Locus Tag: TcasGA2_TC016072] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314713] [Gene Type: protein-coding]","TcasGA2_TC016072; LOC103314713"]
[1768,"NC_007425.3",2104020,"SNV","A","G","Homozygous",25,25,100,1,18,9,0.33,37.52,27,27,14,18,null,1,1,"no","G/G","No",1,95.13,"XP_008197931.1:c.[997A>G]; XP_015839427.1:c.[1000A>G]","XP_008197931.1:p.[Thr333Ala]; XP_015839427.1:p.[Thr334Ala]","LOC656573",656573,null,"656573 [Gene Symbol: LOC656573] [Locus Tag: TcasGA2_TC011284] [Chromosome: LG10] [Map Location: ] [Description: sodium- and chloride-dependent glycine transporter 1] [Gene Type: protein-coding]","TcasGA2_TC011284; LOC656573"]
[1771,"NC_007425.3",2145557,"SNV","C","T","Homozygous",23,23,100,1,19,8,0.3,37.78,27,27,15,18,null,1,1,"no","T/T","No",1,90.72,"XP_015839419.1:c.[602G>A]; XP_015839418.1:c.[602G>A]","XP_015839419.1:p.[Arg201Lys]; XP_015839418.1:p.[Arg201Lys]","LOC656998",656998,null,"656998 [Gene Symbol: LOC656998] [Locus Tag: TcasGA2_TC030230] [Chromosome: LG10] [Map Location: ] [Description: gustatory receptor candidate 16] [Gene Type: protein-coding]","gr16; TcasGA2_TC030230; LOC656998; TcGr141"]
[1772,"NC_007425.3",2145585,"SNV","G","A","Homozygous",23,23,100,1,13,14,0.48,37.43,27,27,14,17,null,1,1,"no","A/A","No",1,90.72,"XP_015839419.1:c.[574C>T]; XP_015839418.1:c.[574C>T]","XP_015839419.1:p.[Leu192Phe]; XP_015839418.1:p.[Leu192Phe]","LOC656998",656998,null,"656998 [Gene Symbol: LOC656998] [Locus Tag: TcasGA2_TC030230] [Chromosome: LG10] [Map Location: ] [Description: gustatory receptor candidate 16] [Gene Type: protein-coding]","gr16; TcasGA2_TC030230; LOC656998; TcGr141"]
[1773,"NC_007425.3",2279706,"SNV","G","A","Heterozygous",11,20,55,1,8,3,0.27,38.27,11,20,6,8,0.84,0.3,1,"no","A/G","No",1,72.72,"XP_015839415.1:c.86C>T","XP_015839415.1:p.Ala29Val","LOC107398746",107398746,null,"107398746 [Gene Symbol: LOC107398746] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: shematrin-like protein 3] [Gene Type: protein-coding]","LOC107398746"]
[1775,"NC_007425.3",2446841,"SNV","G","C","Homozygous",21,21,100,1,8,17,0.32,36.9,25,25,13,14,null,1,1,"no","C/C","No",1,83.13,"XP_015839447.1:c.944G>C","XP_015839447.1:p.Cys315Ser","LOC659888",659888,null,"659888 [Gene Symbol: LOC659888] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: rab-like protein 6] [Gene Type: protein-coding]","LOC659888"]
[1776,"NC_007425.3",2652274,"SNV","G","A","Homozygous",21,21,100,1,12,13,0.48,36.29,25,25,8,11,null,1,1,"no","A/A","No",1,84.7,"XP_015839518.1:c.[270+6464G>A]; XP_015839520.1:c.[270+6464G>A]; XP_015839522.1:c.[52G>A]; XP_015839517.1:c.[270+6464G>A]; XP_015839515.1:c.[270+6464G>A]; XP_015839516.1:c.[270+6464G>A]; XP_015839514.1:c.[270+6464G>A]; XP_015839521.1:c.[270+6464G>A]","XP_015839522.1:p.Gly18Ser","LOC659679",659679,null,"659679 [Gene Symbol: LOC659679] [Locus Tag: TcasGA2_TC031941] [Chromosome: LG10] [Map Location: ] [Description: CUGBP Elav-like family member 4] [Gene Type: protein-coding]","LOC659679; TcasGA2_TC031941"]
[1778,"NC_007425.3","3058437^3058438","Insertion","-","TCC","Heterozygous",15,25,60,1,14,1,0.07,38.53,15,25,8,10,0.29,0.13,0.37,"no","complex","No",1,200,"XP_008198124.1:c.368_369insGGA","XP_008198124.1:p.Glu123_Asp124insGlu","LOC659127",659127,null,"659127 [Gene Symbol: LOC659127] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: coiled-coil domain-containing protein 174] [Gene Type: protein-coding]","LOC659127"]
[1779,"NC_007425.3",3058463,"SNV","G","C","Homozygous",22,22,100,1,20,6,0.23,37.23,26,26,13,15,null,1,1,"no","C/C","No",1,86.13,"XP_008198124.1:c.343C>G","XP_008198124.1:p.Gln115Glu","LOC659127",659127,null,"659127 [Gene Symbol: LOC659127] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: coiled-coil domain-containing protein 174] [Gene Type: protein-coding]","LOC659127"]
[1781,"NC_007425.3",3404480,"SNV","G","A","Homozygous",20,20,100,1,9,16,0.36,37.2,25,25,11,14,null,1,1,"no","A/A","No",1,81.7,"XP_015839512.1:c.473G>A","XP_015839512.1:p.Ser158Asn","LOC107398760",107398760,null,"107398760 [Gene Symbol: LOC107398760] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: prolyl 4-hydroxylase subunit alpha-1-like] [Gene Type: protein-coding]","LOC107398760"]
[1783,"NC_007425.3",4273590,"SNV","A","G","Heterozygous",11,20,55,1,4,7,0.36,35.91,11,26,6,9,0.34,0.99,0.96,"no","A/G","No",1,71.91,"XP_972567.2:c.1682T>C","XP_972567.2:p.Ile561Thr","LOC661309",661309,null,"661309 [Gene Symbol: LOC661309] [Locus Tag: TcasGA2_TC011126] [Chromosome: LG10] [Map Location: ] [Description: double-stranded RNA-specific editase Adar] [Gene Type: protein-coding]","TcasGA2_TC011126; LOC661309"]
[1787,"NC_007425.3",4555739,"SNV","C","G","Heterozygous",17,26,65.38,1,8,14,0.36,38.41,22,31,10,10,1.91,0.65,1,"no","C/G","No",1,54.94,"XP_015839555.1:c.9802C>G","XP_015839555.1:p.Pro3268Ala","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1788,"NC_007425.3",4556121,"SNV","C","T","Heterozygous",16,25,64,1,8,8,0.5,37.25,16,28,9,10,1.96,0.65,0.93,"no","C/T","No",1,50.01,"XP_015839555.1:c.10184C>T","XP_015839555.1:p.Thr3395Ile","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1790,"NC_007425.3","4560135..4560136","MNV","GT","AC","Homozygous",17,20,85,1,8,12,0.4,38.79,20,23,15,15,null,0.89,1,"no","AC/AC","No",1,200,"XP_015839555.1:c.12163_12164delGTinsAC","XP_015839555.1:p.Val4055Thr","LOC656972",656972,null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2"]
[1793,"NC_007425.3",4815762,"SNV","A","G","Homozygous",24,24,100,1,14,13,0.48,38.75,27,27,10,16,null,1,1,"no","G/G","No",1,92.13,"XP_015839583.1:c.[944A>G]; XP_015839582.1:c.[1091A>G]; XP_015839581.1:c.[767-9587T>C]; XP_008199126.1:c.[1091A>G]","XP_015839583.1:p.[Lys315Arg]; XP_015839582.1:p.[Lys364Arg]; XP_008199126.1:p.[Lys364Arg]","LOC657833, LOC103314542","657833 , 103314542",null,"657833 [Gene Symbol: LOC657833] [Locus Tag: TcasGA2_TC016192] [Chromosome: LG10] [Map Location: ] [Description: gamma-aminobutyric acid type B receptor subunit 1] [Gene Type: protein-coding] || 103314542 [Gene Symbol: LOC103314542] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: probable cytochrome P450 6a13] [Gene Type: protein-coding]","TcasGA2_TC016192; LOC657833 || LOC103314542"]
[1794,"NC_007425.3","4815799..4815800","MNV","TG","AT","Homozygous",18,22,81.82,1,10,9,0.47,37.11,19,23,9,10,-2.43,0.91,0.94,"no","AT/AT","No",1,200,"XP_008199126.1:c.[1128_1129delTGinsAT]; XP_015839582.1:c.[1128_1129delTGinsAT]; XP_015839581.1:c.[767-9625_767-9624delCAinsAT]; XP_015839583.1:c.[981_982delTGinsAT]","XP_008199126.1:p.[Asn376_Ala377delinsLysSer]; XP_015839582.1:p.[Asn376_Ala377delinsLysSer]; XP_015839583.1:p.[Asn327_Ala328delinsLysSer]","LOC657833, LOC103314542","657833 , 103314542",null,"657833 [Gene Symbol: LOC657833] [Locus Tag: TcasGA2_TC016192] [Chromosome: LG10] [Map Location: ] [Description: gamma-aminobutyric acid type B receptor subunit 1] [Gene Type: protein-coding] || 103314542 [Gene Symbol: LOC103314542] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: probable cytochrome P450 6a13] [Gene Type: protein-coding]","TcasGA2_TC016192; LOC657833 || LOC103314542"]
[1795,"NC_007425.3",5771726,"SNV","C","T","Homozygous",20,20,100,1,5,18,0.22,39.5,23,23,12,8,null,1,1,"no","T/T","No",1,81.69,"XP_008198790.1:c.[1057G>A]; XP_015839620.1:c.[1057G>A]","XP_008198790.1:p.[Val353Met]; XP_015839620.1:p.[Val353Met]","LOC655253",655253,null,"655253 [Gene Symbol: LOC655253] [Locus Tag: TcasGA2_TC011402] [Chromosome: LG10] [Map Location: ] [Description: cilia- and flagella-associated protein 43] [Gene Type: protein-coding]","LOC655253; TcasGA2_TC011402"]
[1796,"NC_007425.3",5786581,"SNV","C","T","Homozygous",20,20,100,1,9,12,0.43,37.85,21,21,13,14,null,1,1,"no","T/T","No",1,81.7,"XP_966528.2:c.2722G>A","XP_966528.2:p.Asp908Asn","LOC654966",654966,null,"654966 [Gene Symbol: LOC654966] [Locus Tag: TcasGA2_TC011400] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC654966] [Gene Type: protein-coding]","TcasGA2_TC011400; LOC654966"]
[1797,"NC_007425.3",5886779,"SNV","G","A","Heterozygous",8,21,38.1,1,6,5,0.45,39.38,11,26,5,7,0.07,0.65,0.91,"no","A/G","No",1,56.25,"NP_001164243.1:c.[1667+339C>T]; XP_966784.2:c.[875G>A]","XP_966784.2:p.Arg292Lys","Ance-3, LOC657620","658170 , 657620","angiotensin-converting enzyme 3","658170 [Gene Symbol: Ance-3] [Locus Tag: TcasGA2_TC031642] [Chromosome: LG10] [Map Location: ] [Description: angiotensin-converting enzyme 3] [Gene Type: protein-coding] || 657620 [Gene Symbol: LOC657620] [Locus Tag: TcasGA2_TC031643] [Chromosome: LG10] [Map Location: ] [Description: pollen-specific leucine-rich repeat extensin-like protein 4] [Gene Type: protein-coding]","TcasGA2_TC031642; Ance-3; GLEAN_02092 || LOC657620; TcasGA2_TC031643"]
[1799,"NC_007425.3",5920115,"SNV","T","A","Heterozygous",9,22,40.91,1,7,6,0.46,36.44,13,26,4,4,-1.8,0.86,0.98,"no","A/T","No",1,66.11,"XP_008199894.2:c.974T>A","XP_008199894.2:p.Phe325Tyr","LOC657844",657844,null,"657844 [Gene Symbol: LOC657844] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: tenascin] [Gene Type: protein-coding]","LOC657844; NimCl1"]
[1801,"NC_007425.3",6017453,"SNV","A","G","Homozygous",29,29,100,1,16,15,0.48,37.31,31,31,13,20,null,1,1,"no","G/G","No",1,107.18,"XP_008199891.1:c.2269A>G","XP_008199891.1:p.Ile757Val","LOC656558",656558,null,"656558 [Gene Symbol: LOC656558] [Locus Tag: TcasGA2_TC031632] [Chromosome: LG10] [Map Location: ] [Description: collagen alpha-1(V) chain] [Gene Type: protein-coding]","LOC656558; TcasGA2_TC031632"]
[1802,"NC_007425.3",6017847,"SNV","A","G","Heterozygous",12,24,50,1,0,12,0,37.42,12,27,5,7,-0.23,0.34,0.17,"no","A/G","No",1,96.33,"XP_008199891.1:c.2623A>G","XP_008199891.1:p.Thr875Ala","LOC656558",656558,null,"656558 [Gene Symbol: LOC656558] [Locus Tag: TcasGA2_TC031632] [Chromosome: LG10] [Map Location: ] [Description: collagen alpha-1(V) chain] [Gene Type: protein-coding]","LOC656558; TcasGA2_TC031632"]
[1803,"NC_007425.3","6021470..6021472","Deletion","CAA","-","Homozygous",20,23,86.96,1,9,11,0.45,36.7,20,23,10,16,null,0.96,0.99,"no","-/-","No",1,200,"XP_015839573.1:c.[127_129delCAA]; XP_015839571.1:c.[127_129delCAA]; XP_015839572.1:c.[127_129delCAA]; XP_008199877.1:c.[127_129delCAA]; XP_015839570.1:c.[127_129delCAA]; XP_015839568.1:c.[127_129delCAA]; XP_015839569.1:c.[127_129delCAA]","XP_015839573.1:p.[Gln47del]; XP_015839571.1:p.[Gln47del]; XP_015839572.1:p.[Gln47del]; XP_008199877.1:p.[Gln47del]; XP_015839570.1:p.[Gln47del]; XP_015839568.1:p.[Gln47del]; XP_015839569.1:p.[Gln47del]","LOC656472",656472,null,"656472 [Gene Symbol: LOC656472] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: protein transport protein Sec16A] [Gene Type: protein-coding]","LOC656472"]
[1804,"NC_007425.3",6092999,"SNV","T","G","Homozygous",19,20,95,1,9,10,0.47,38.32,19,20,10,12,null,0.99,1,"no","G/G","No",1,52.39,"XP_967374.1:c.[87+356T>G]; XP_015839553.1:c.[1546A>C]","XP_015839553.1:p.Met516Leu","LOC655722, LOC103314776","655722 , 103314776",null,"655722 [Gene Symbol: LOC655722] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: DNA mismatch repair protein Msh2] [Gene Type: protein-coding] || 103314776 [Gene Symbol: LOC103314776] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314776] [Gene Type: protein-coding]","LOC655722 || LOC103314776"]
[1811,"NC_007425.3","6235088..6235089","MNV","TA","AT","Heterozygous",9,29,31.03,1,5,4,0.44,39.39,9,29,7,6,0.07,0.98,1,"no","complex","No",1,200,"XP_008198893.1:c.[1518_1519delTAinsAT]; XP_008198892.1:c.[1524_1525delTAinsAT]","XP_008198893.1:p.[Asn506_Ile507delinsLysLeu]; XP_008198892.1:p.[Asn508_Ile509delinsLysLeu]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1812,"NC_007425.3",6235141,"SNV","C","T","Heterozygous",9,23,39.13,1,4,5,0.44,40,9,23,8,7,1.76,0.27,1,"no","C/T","No",1,63.31,"XP_008198893.1:c.[1466G>A]; XP_008198892.1:c.[1472G>A]","XP_008198893.1:p.[Arg489His]; XP_008198892.1:p.[Arg491His]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1813,"NC_007425.3",6235222,"SNV","A","G","Heterozygous",19,53,35.85,1,9,13,0.41,38.37,22,62,13,13,-1.32,0.99,0.98,"no","A/G","No",1,108.51,"XP_008198893.1:c.[1385T>C]; XP_008198892.1:c.[1391T>C]","XP_008198893.1:p.[Phe462Ser]; XP_008198892.1:p.[Phe464Ser]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1815,"NC_007425.3",6235257,"Deletion","A","-","Heterozygous",22,48,45.83,1,12,20,0.38,37.91,32,61,13,14,-1.26,0.42,1,"no","-/A","No",1,148.75,"XP_008198892.1:c.[1356delT]; XP_008198893.1:c.[1350delT]","XP_008198892.1:p.[Asp452fs]; XP_008198893.1:p.[Asp450fs]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1816,"NC_007425.3",6235259,"SNV","C","A","Heterozygous",23,49,46.94,1,12,21,0.36,39.04,33,62,14,15,-1.3,0.34,1,"no","A/C","No",1,200,"XP_008198892.1:c.[1354G>T]; XP_008198893.1:c.[1348G>T]","XP_008198892.1:p.[Asp452Tyr]; XP_008198893.1:p.[Asp450Tyr]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1817,"NC_007425.3","6235261..6235262","Deletion","TC","-","Heterozygous",23,47,48.94,1,12,21,0.36,38.39,33,60,23,21,-2.5,0.72,1,"no","complex","No",1,200,"XP_008198893.1:c.[1345_1346delGA]; XP_008198892.1:c.[1351_1352delGA]","XP_008198893.1:p.[Glu449fs]; XP_008198892.1:p.[Glu451fs]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1819,"NC_007425.3",6235432,"SNV","T","C","Heterozygous",8,23,34.78,1,5,3,0.38,38.88,8,24,7,7,0.55,0.73,0.98,"no","C/T","No",1,51.78,"XP_008198893.1:c.[1175A>G]; XP_008198892.1:c.[1181A>G]","XP_008198893.1:p.[Asn392Ser]; XP_008198892.1:p.[Asn394Ser]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1820,"NC_007425.3","6235455..6235456","MNV","CT","TG","Heterozygous",11,24,45.83,1,8,5,0.38,38.18,13,27,11,10,0.76,0.82,0.99,"no","complex","No",1,200,"XP_008198893.1:c.[1151_1152delAGinsCA]; XP_008198892.1:c.[1157_1158delAGinsCA]","XP_008198893.1:p.[Lys384Thr]; XP_008198892.1:p.[Lys386Thr]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1821,"NC_007425.3",6235460,"SNV","C","T","Heterozygous",13,22,59.09,1,8,7,0.47,36.69,15,28,10,10,0.33,0.88,1,"no","C/T","No",1,67.4,"XP_008198892.1:c.[1153G>A]; XP_008198893.1:c.[1147G>A]","XP_008198892.1:p.[Val385Ile]; XP_008198893.1:p.[Val383Ile]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1822,"NC_007425.3",6235481,"SNV","C","T","Heterozygous",10,22,45.45,1,5,8,0.38,37.4,13,29,9,7,-0.07,0.9,1,"no","C/T","No",1,78.86,"XP_008198892.1:c.[1132G>A]; XP_008198893.1:c.[1126G>A]","XP_008198892.1:p.[Glu378Lys]; XP_008198893.1:p.[Glu376Lys]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1824,"NC_007425.3",6417541,"SNV","G","A","Heterozygous",11,28,39.29,1,5,7,0.42,37.27,12,35,6,8,0.31,0.91,0.98,"no","A/G","No",1,75.13,"XP_008198904.2:c.272C>T","XP_008198904.2:p.Ser91Leu","LOC656408",656408,null,"656408 [Gene Symbol: LOC656408] [Locus Tag: TcasGA2_TC011024] [Chromosome: LG10] [Map Location: ] [Description: heat shock protein 75 kDa, mitochondrial] [Gene Type: protein-coding]","LOC656408; TcasGA2_TC011024"]
[1825,"NC_007425.3",6417614,"SNV","G","T","Homozygous",34,34,100,1,13,29,0.31,38.32,42,42,19,25,null,1,1,"no","T/T","No",1,123.81,"XP_008198904.2:c.199C>A","XP_008198904.2:p.Gln67Lys","LOC656408",656408,null,"656408 [Gene Symbol: LOC656408] [Locus Tag: TcasGA2_TC011024] [Chromosome: LG10] [Map Location: ] [Description: heat shock protein 75 kDa, mitochondrial] [Gene Type: protein-coding]","LOC656408; TcasGA2_TC011024"]
[1826,"NC_007425.3","6631101..6631102","MNV","TT","AA","Homozygous",31,31,100,1,21,19,0.47,37.69,40,40,18,23,null,1,1,"no","AA/AA","No",1,200,"XP_015839633.1:c.[446+25680_446+25681delTTinsAA]; XP_008198929.1:c.[137+25366_137+25367delTTinsAA]; XP_008198930.1:c.[113+25680_113+25681delTTinsAA]; XP_015839634.1:c.[113+25680_113+25681delTTinsAA]; XP_015839635.1:c.[107+25680_107+25681delTTinsAA]; XP_015839643.1:c.[468_469delAAinsTT]","XP_015839643.1:p.Lys156_Ile157delinsAsnPhe","LOC100141873, LOC107398784","100141873 , 107398784",null,"100141873 [Gene Symbol: LOC100141873] [Locus Tag: TcasGA2_TC011464] [Chromosome: LG10] [Map Location: ] [Description: GRAM domain-containing protein 3] [Gene Type: protein-coding] || 107398784 [Gene Symbol: LOC107398784] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398784] [Gene Type: protein-coding]","LOC100141873; TcasGA2_TC011464 || LOC107398784"]
[1827,"NC_007425.3",6631107,"SNV","T","C","Homozygous",31,31,100,1,21,19,0.47,37.55,40,40,16,18,null,1,1,"no","C/C","No",1,113.22,"XP_008198930.1:c.[113+25686T>C]; XP_015839634.1:c.[113+25686T>C]; XP_015839633.1:c.[446+25686T>C]; XP_008198929.1:c.[137+25372T>C]; XP_015839635.1:c.[107+25686T>C]; XP_015839643.1:c.[463A>G]","XP_015839643.1:p.Lys155Glu","LOC100141873, LOC107398784","100141873 , 107398784",null,"100141873 [Gene Symbol: LOC100141873] [Locus Tag: TcasGA2_TC011464] [Chromosome: LG10] [Map Location: ] [Description: GRAM domain-containing protein 3] [Gene Type: protein-coding] || 107398784 [Gene Symbol: LOC107398784] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398784] [Gene Type: protein-coding]","LOC100141873; TcasGA2_TC011464 || LOC107398784"]
[1828,"NC_007425.3",6631133,"SNV","A","C","Homozygous",26,26,100,1,14,21,0.4,36.31,35,35,14,14,null,1,1,"no","C/C","No",1,98.17,"XP_015839634.1:c.[113+25712A>C]; XP_015839635.1:c.[107+25712A>C]; XP_008198929.1:c.[137+25398A>C]; XP_008198930.1:c.[113+25712A>C]; XP_015839633.1:c.[446+25712A>C]; XP_015839643.1:c.[437T>G]","XP_015839643.1:p.Leu146Trp","LOC100141873, LOC107398784","100141873 , 107398784",null,"100141873 [Gene Symbol: LOC100141873] [Locus Tag: TcasGA2_TC011464] [Chromosome: LG10] [Map Location: ] [Description: GRAM domain-containing protein 3] [Gene Type: protein-coding] || 107398784 [Gene Symbol: LOC107398784] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398784] [Gene Type: protein-coding]","LOC100141873; TcasGA2_TC011464 || LOC107398784"]
[1829,"NC_007425.3",6899709,"SNV","T","C","Heterozygous",9,24,37.5,1,2,7,0.22,38.44,9,24,5,5,-0.89,0.56,0.83,"no","C/T","No",1,61.84,"NP_001164314.1:c.427A>G","NP_001164314.1:p.Thr143Ala","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1830,"NC_007425.3",6899808,"SNV","G","T","Heterozygous",11,24,45.83,1,6,8,0.43,36.91,14,28,6,8,-0.7,0.43,0.99,"no","G/T","No",1,82.74,"NP_001164314.1:c.328C>A","NP_001164314.1:p.Gln110Lys","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1833,"NW_015450228.1",3369,"SNV","T","C","Homozygous",26,26,100,1,12,25,0.32,35.88,37,37,16,16,null,1,1,"no","C/C","No",1,98.14,"XP_008201306.2:c.1669A>G","XP_008201306.2:p.Asn557Asp","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1834,"NW_015450228.1",3372,"SNV","G","A","Homozygous",27,27,100,1,12,24,0.33,36.78,36,36,18,18,null,1,1,"no","A/A","No",1,99.74,"XP_008201306.2:c.1666C>T","XP_008201306.2:p.Leu556Phe","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1837,"NW_015450228.1",4360,"SNV","T","C","Heterozygous",6,30,20,1,6,0,0,37,6,36,4,3,null,0.23,0.54,"no","complex","No",1,200,"XP_008201306.2:c.1511A>G","XP_008201306.2:p.Asp504Gly","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1838,"NW_015450228.1","4360..4361","MNV","TC","CT","Heterozygous",24,30,80,1,23,8,0.26,36.98,31,37,21,23,null,0.98,0.99,"no","complex","No",1,200,"XP_008201306.2:c.1510_1511delGAinsAG","XP_008201306.2:p.Asp504Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1839,"NW_015450228.1",4399,"SNV","G","T","Homozygous",44,44,100,1,41,11,0.21,39.09,52,52,24,27,null,1,1,"no","T/T","No",1,153.53,"XP_008201306.2:c.1472C>A","XP_008201306.2:p.Thr491Asn","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1840,"NW_015450228.1",4592,"SNV","C","G","Heterozygous",40,56,71.43,1,27,22,0.45,38.33,49,65,22,23,2.11,0.96,0.99,"no","C/G","No",1,60.71,"XP_008201306.2:c.1279G>C","XP_008201306.2:p.Glu427Gln","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1841,"NW_015450228.1",4594,"SNV","T","G","Heterozygous",40,56,71.43,1,25,22,0.47,38.7,47,63,22,23,1.58,0.98,1,"no","G/T","No",1,57.34,"XP_008201306.2:c.1277A>C","XP_008201306.2:p.Lys426Thr","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1842,"NW_015450228.1","4795..4798","Replacement","ACCC","G","Homozygous",37,38,97.37,1,24,19,0.44,37.61,43,44,25,32,null,1,1,"no","G/G","No",1,200,"XP_008201306.2:c.1073_1076delGGGTinsC","XP_008201306.2:p.Arg358_Val359delinsPro","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1843,"NW_015450228.1",4878,"SNV","G","T","Homozygous",90,96,93.75,1,50,53,0.49,38.68,103,109,51,57,null,1,1,"no","T/T","No",1,159.55,"XP_008201306.2:c.993C>A","XP_008201306.2:p.Phe331Leu","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1844,"NW_015450228.1","4960..4961","MNV","CA","GG","Homozygous",67,67,100,1,34,44,0.44,37.4,78,78,43,46,null,1,1,"no","GG/GG","No",1,200,"XP_008201306.2:c.910_911delTGinsCC","XP_008201306.2:p.Cys304Pro","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1845,"NW_015450228.1",5176,"SNV","T","C","Homozygous",59,67,88.06,1,38,28,0.42,37.97,66,74,41,46,null,0.99,1,"no","C/C","No",1,71.98,"XP_008201306.2:c.695A>G","XP_008201306.2:p.Asn232Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1846,"NW_015450228.1",5270,"SNV","T","G","Homozygous",52,60,86.67,1,20,34,0.37,39.12,54,62,32,34,null,0.99,1,"no","G/G","No",1,55.94,"XP_008201306.2:c.601A>C","XP_008201306.2:p.Ile201Leu","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1847,"NW_015450228.1",5279,"SNV","A","G","Homozygous",61,61,100,1,26,39,0.4,38.98,65,65,37,39,null,1,1,"no","G/G","No",1,200,"XP_008201306.2:c.592T>C","XP_008201306.2:p.Tyr198His","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1848,"NW_015450228.1",5461,"SNV","C","G","Homozygous",51,51,100,1,29,27,0.48,38.76,56,56,34,38,null,1,1,"no","G/G","No",1,159.55,"XP_008201306.2:c.410G>C","XP_008201306.2:p.Gly137Ala","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1849,"NW_015450228.1",5498,"SNV","T","C","Homozygous",62,62,100,1,36,40,0.47,37.9,76,76,38,39,null,1,1,"no","C/C","No",1,159.55,"XP_008201306.2:c.373A>G","XP_008201306.2:p.Ile125Val","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1850,"NW_015450228.1",5582,"SNV","G","A","Homozygous",54,57,94.74,1,30,33,0.48,36.74,63,67,35,33,null,1,1,"no","A/A","No",1,106.82,"XP_008201306.2:c.289C>T","XP_008201306.2:p.Gln97*","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1851,"NW_015450228.1",5615,"SNV","G","A","Homozygous",53,53,100,1,32,31,0.49,38.3,63,63,30,29,null,1,1,"no","A/A","No",1,159.55,"XP_008201306.2:c.256C>T","XP_008201306.2:p.Pro86Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1852,"NW_015450228.1",5627,"SNV","C","T","Homozygous",57,57,100,1,32,35,0.48,38.46,67,67,30,31,null,1,1,"no","T/T","No",1,156.54,"XP_008201306.2:c.244G>A","XP_008201306.2:p.Glu82Lys","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1853,"NW_015450228.1","5708^5709","Insertion","-","G","Homozygous",51,51,100,1,11,51,0.18,38.57,62,62,26,26,null,1,1,"no","G/G","No",1,159.55,"XP_008201306.2:c.162_163insC","XP_008201306.2:p.Arg55fs","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1854,"NW_015450233.1",266604,"SNV","G","C","Heterozygous",11,23,47.83,1,2,9,0.18,36.64,11,23,5,4,0.18,0.2,0.62,"no","C/G","No",1,88.64,"XP_001807794.1:c.[594G>C]; XP_008198752.1:c.[594G>C]","XP_001807794.1:p.[Glu198Asp]; XP_008198752.1:p.[Glu198Asp]","LOC656073",656073,null,"656073 [Gene Symbol: LOC656073] [Locus Tag: TcasGA2_TC011371] [Chromosome: LG10] [Map Location: ] [Description: chondroitin sulfate synthase 1] [Gene Type: protein-coding]","TcasGA2_TC011371; LOC656073"]
[1855,"NW_015450233.1",274604,"SNV","G","A","Homozygous",20,20,100,1,14,13,0.48,35.6,27,27,11,12,null,1,1,"no","A/A","No",1,78.69,"NP_001128383.1:c.691G>A","NP_001128383.1:p.Asp231Asn","Mrpl1",656160,"mitochondrial ribosomal protein L1","656160 [Gene Symbol: Mrpl1] [Locus Tag: TcasGA2_TC011372] [Chromosome: LG10] [Map Location: ] [Description: mitochondrial ribosomal protein L1] [Gene Type: protein-coding]","TcasGA2_TC011372; Mrpl1"]
[1856,"NW_015450233.1",364305,"SNV","A","T","Homozygous",20,21,95.24,1,13,8,0.38,37.55,21,22,13,11,null,1,1,"no","T/T","No",1,55.05,"XP_008198754.1:c.[65-508A>T]; XP_015839845.1:c.[439T>A]","XP_015839845.1:p.Ser147Thr","LOC656828, LOC107398839","656828 , 107398839",null,"656828 [Gene Symbol: LOC656828] [Locus Tag: TcasGA2_TC011374] [Chromosome: LG10] [Map Location: ] [Description: protocadherin-15] [Gene Type: protein-coding] || 107398839 [Gene Symbol: LOC107398839] [Locus Tag: TcasGA2_TC030233] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398839] [Gene Type: protein-coding]","TcasGA2_TC011374; LOC656828 || TcasGA2_TC030233; TcGr144; LOC107398839"]
[1857,"NW_015450233.1",364312,"SNV","T","C","Homozygous",19,20,95,1,13,8,0.38,38.53,21,22,12,10,null,0.99,1,"no","C/C","No",1,51.01,"XP_008198754.1:c.[65-501T>C]; XP_015839845.1:c.[432A>G]","XP_015839845.1:p.Ile144Met","LOC656828, LOC107398839","656828 , 107398839",null,"656828 [Gene Symbol: LOC656828] [Locus Tag: TcasGA2_TC011374] [Chromosome: LG10] [Map Location: ] [Description: protocadherin-15] [Gene Type: protein-coding] || 107398839 [Gene Symbol: LOC107398839] [Locus Tag: TcasGA2_TC030233] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398839] [Gene Type: protein-coding]","TcasGA2_TC011374; LOC656828 || TcasGA2_TC030233; TcGr144; LOC107398839"]
[1860,"NW_015450233.1",416096,"SNV","C","T","Homozygous",20,20,100,1,15,9,0.38,37.75,24,24,12,12,null,1,1,"no","T/T","No",1,81.69,"XP_008198760.1:c.1133G>A","XP_008198760.1:p.Arg378Lys","LOC657242",657242,null,"657242 [Gene Symbol: LOC657242] [Locus Tag: TcasGA2_TC011099] [Chromosome: LG10] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","LOC657242; TcasGA2_TC011099"]
[1861,"NW_015450233.1",416100,"SNV","T","C","Homozygous",20,20,100,1,15,11,0.42,37.95,26,26,12,13,null,1,1,"no","C/C","No",1,80.12,"XP_008198760.1:c.1129A>G","XP_008198760.1:p.Ile377Val","LOC657242",657242,null,"657242 [Gene Symbol: LOC657242] [Locus Tag: TcasGA2_TC011099] [Chromosome: LG10] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","LOC657242; TcasGA2_TC011099"]
[1862,"NW_015450233.1",416151,"SNV","A","T","Homozygous",24,24,100,1,12,13,0.48,36.71,25,25,17,16,null,1,1,"no","T/T","No",1,93.73,"XP_008198760.1:c.1078T>A","XP_008198760.1:p.Ser360Thr","LOC657242",657242,null,"657242 [Gene Symbol: LOC657242] [Locus Tag: TcasGA2_TC011099] [Chromosome: LG10] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","LOC657242; TcasGA2_TC011099"]
[1863,"NW_015450233.1",499896,"SNV","C","T","Homozygous",25,25,100,1,19,9,0.32,37.32,28,28,16,17,null,1,1,"no","T/T","No",1,96.74,"XP_969311.1:c.166C>T","XP_969311.1:p.Leu56Phe","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1864,"NW_015450233.1",502365,"SNV","G","T","Homozygous",23,23,100,1,11,13,0.46,37.35,24,24,14,20,null,1,1,"no","T/T","No",1,90.72,"XP_969311.1:c.2635G>T","XP_969311.1:p.Ala879Ser","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1865,"NW_015450233.1",525721,"SNV","G","C","Heterozygous",15,23,65.22,1,3,12,0.2,37.8,15,23,5,7,0.26,0.27,0.92,"no","C/G","No",1,50.58,"XP_969459.1:c.227G>C","XP_969459.1:p.Ser76Thr","LOC657946",657946,null,"657946 [Gene Symbol: LOC657946] [Locus Tag: TcasGA2_TC011381] [Chromosome: LG10] [Map Location: ] [Description: CDGSH iron-sulfur domain-containing protein 2 homolog] [Gene Type: protein-coding]","TcasGA2_TC011381; LOC657946"]
[1866,"NW_015450233.1",526434,"SNV","A","G","Homozygous",21,21,100,1,14,8,0.36,37.62,22,22,11,14,null,1,1,"no","G/G","No",1,83.1,"XP_008198771.1:c.464T>C","XP_008198771.1:p.Leu155Pro","LOC103314450",103314450,null,"103314450 [Gene Symbol: LOC103314450] [Locus Tag: TcasGA2_TC011094] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314450; TcasGA2_TC011094"]
[1867,"NW_015450233.1",540554,"SNV","A","G","Homozygous",22,23,95.65,1,11,15,0.42,38.45,26,27,9,16,null,1,1,"no","G/G","No",1,59.86,"XP_008198772.1:c.[41-1351T>C]; XP_015839863.1:c.[193A>G]","XP_015839863.1:p.Ile65Val","LOC658334, LOC107398847","658334 , 107398847",null,"658334 [Gene Symbol: LOC658334] [Locus Tag: TcasGA2_TC011092] [Chromosome: LG10] [Map Location: ] [Description: xaa-Pro aminopeptidase 1] [Gene Type: protein-coding] || 107398847 [Gene Symbol: LOC107398847] [Locus Tag: TcasGA2_TC011384] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398847] [Gene Type: protein-coding]","TcasGA2_TC011092; LOC658334 || LOC107398847; TcasGA2_TC011384"]
[1868,"NW_015450233.1",614605,"SNV","G","C","Homozygous",21,21,100,1,8,16,0.33,37.62,24,24,8,9,null,1,1,"no","C/C","No",1,83.12,"XP_015839840.1:c.[639G>C]; XP_970426.1:c.[639G>C]","XP_015839840.1:p.[Glu213Asp]; XP_970426.1:p.[Glu213Asp]","LOC658992",658992,null,"658992 [Gene Symbol: LOC658992] [Locus Tag: TcasGA2_TC011388] [Chromosome: LG10] [Map Location: ] [Description: dynactin subunit 4] [Gene Type: protein-coding]","Dctn4; TcasGA2_TC011388; p62; LOC658992"]
[1869,"NW_015450233.1",801378,"SNV","A","G","Homozygous",20,20,100,1,9,12,0.43,37.2,21,21,13,17,null,1,1,"no","G/G","No",1,80.09,"XP_015839816.1:c.[7348A>G]; XP_015839823.1:c.[6898A>G]; XP_015839814.1:c.[7339A>G]; XP_015839817.1:c.[7315A>G]; XP_015839828.1:c.[2569A>G]; XP_015839830.1:c.[2167A>G]; XP_015839811.1:c.[7348A>G]; XP_015839818.1:c.[7282A>G]; XP_015839824.1:c.[6898A>G]; XP_015839826.1:c.[7348A>G]; XP_015839820.1:c.[7219A>G]; XP_015839827.1:c.[2698A>G]; XP_015839821.1:c.[7015A>G]; XP_015839812.1:c.[7348A>G]; XP_015839819.1:c.[7249A>G]; XP_015839825.1:c.[7348A>G]; XP_015839813.1:c.[7339A>G]; XP_015839815.1:c.[7348A>G]; XP_015839829.1:c.[2272A>G]","XP_015839816.1:p.[Thr2450Ala]; XP_015839823.1:p.[Thr2300Ala]; XP_015839814.1:p.[Thr2447Ala]; XP_015839817.1:p.[Thr2439Ala]; XP_015839828.1:p.[Thr857Ala]; XP_015839830.1:p.[Thr723Ala]; XP_015839811.1:p.[Thr2450Ala]; XP_015839818.1:p.[Thr2428Ala]; XP_015839824.1:p.[Thr2300Ala]; XP_015839826.1:p.[Thr2450Ala]; XP_015839820.1:p.[Thr2407Ala]; XP_015839827.1:p.[Thr900Ala]; XP_015839821.1:p.[Thr2339Ala]; XP_015839812.1:p.[Thr2450Ala]; XP_015839819.1:p.[Thr2417Ala]; XP_015839825.1:p.[Thr2450Ala]; XP_015839813.1:p.[Thr2447Ala]; XP_015839815.1:p.[Thr2450Ala]; XP_015839829.1:p.[Thr758Ala]","LOC659365",659365,null,"659365 [Gene Symbol: LOC659365] [Locus Tag: TcasGA2_TC011393] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC659365] [Gene Type: protein-coding]","LOC659365; TcasGA2_TC011393"]
[1870,"NW_015450233.1",830189,"SNV","G","A","Heterozygous",11,26,42.31,1,8,5,0.38,37.55,13,28,6,9,-0.88,0.13,0.22,"no","A/G","No",1,80.58,"XP_008198786.1:c.[923G>A]; XP_015839834.1:c.[923G>A]","XP_008198786.1:p.[Ser308Asn]; XP_015839834.1:p.[Ser308Asn]","LOC659439",659439,null,"659439 [Gene Symbol: LOC659439] [Locus Tag: TcasGA2_TC011395] [Chromosome: Un] [Map Location: ] [Description: venom carboxylesterase-6] [Gene Type: protein-coding]","LOC659439; TcasGA2_TC011395"]
[1871,"NW_015450233.1",871607,"SNV","A","C","Homozygous",23,23,100,1,16,12,0.43,36.74,28,28,11,14,null,1,1,"no","C/C","No",1,89.14,"XP_008198741.1:c.770A>C","XP_008198741.1:p.His257Pro","LOC103314438",103314438,null,"103314438 [Gene Symbol: LOC103314438] [Locus Tag: TcasGA2_TC011398] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314438; TcasGA2_TC011398"]
[1872,"NW_015450233.1",871618,"SNV","A","G","Homozygous",20,20,100,1,9,12,0.43,37.35,21,21,8,12,null,1,1,"no","G/G","No",1,80.09,"XP_008198741.1:c.781A>G","XP_008198741.1:p.Ile261Val","LOC103314438",103314438,null,"103314438 [Gene Symbol: LOC103314438] [Locus Tag: TcasGA2_TC011398] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314438; TcasGA2_TC011398"]
[1873,"NW_015450233.1",871678,"SNV","G","A","Homozygous",23,23,100,1,14,12,0.46,36.13,26,26,13,13,null,1,1,"no","A/A","No",1,90.72,"XP_008198741.1:c.841G>A","XP_008198741.1:p.Asp281Asn","LOC103314438",103314438,null,"103314438 [Gene Symbol: LOC103314438] [Locus Tag: TcasGA2_TC011398] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314438; TcasGA2_TC011398"]
[1874,"NW_015450233.1",871970,"SNV","G","C","Homozygous",26,26,100,1,18,12,0.4,37.88,30,30,17,20,null,1,1,"no","C/C","No",1,98.17,"XP_008198741.1:c.1133G>C","XP_008198741.1:p.Gly378Ala","LOC103314438",103314438,null,"103314438 [Gene Symbol: LOC103314438] [Locus Tag: TcasGA2_TC011398] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314438; TcasGA2_TC011398"]
[1875,"NW_015450233.1",872947,"SNV","A","G","Homozygous",26,26,100,1,17,9,0.35,38.46,26,26,13,21,null,1,1,"no","G/G","No",1,98.15,"XP_008198741.1:c.2110A>G","XP_008198741.1:p.Thr704Ala","LOC103314438",103314438,null,"103314438 [Gene Symbol: LOC103314438] [Locus Tag: TcasGA2_TC011398] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314438; TcasGA2_TC011398"]
[1876,"NW_015450289.1",62725,"SNV","G","T","Homozygous",21,21,100,1,11,13,0.46,37,24,24,11,11,null,1,1,"no","T/T","No",1,84.71,"XP_008190865.1:c.1991G>T","XP_008190865.1:p.Gly664Val","LOC655982",655982,null,"655982 [Gene Symbol: LOC655982] [Locus Tag: TcasGA2_TC001977] [Chromosome: Un] [Map Location: ] [Description: indole-3-acetaldehyde oxidase] [Gene Type: protein-coding]","LOC655982; TcasGA2_TC001977"]
[1877,"NW_015450289.1",62773,"SNV","G","A","Homozygous",20,20,100,1,8,13,0.38,37,21,21,11,10,null,1,1,"no","A/A","No",1,81.69,"XP_008190865.1:c.2039G>A","XP_008190865.1:p.Gly680Asp","LOC655982",655982,null,"655982 [Gene Symbol: LOC655982] [Locus Tag: TcasGA2_TC001977] [Chromosome: Un] [Map Location: ] [Description: indole-3-acetaldehyde oxidase] [Gene Type: protein-coding]","LOC655982; TcasGA2_TC001977"]
[1878,"NW_015450289.1",63519,"SNV","C","G","Homozygous",21,21,100,1,16,7,0.3,36.48,23,23,9,15,null,1,1,"no","G/G","No",1,83.09,"XP_008190865.1:c.2741C>G","XP_008190865.1:p.Ala914Gly","LOC655982",655982,null,"655982 [Gene Symbol: LOC655982] [Locus Tag: TcasGA2_TC001977] [Chromosome: Un] [Map Location: ] [Description: indole-3-acetaldehyde oxidase] [Gene Type: protein-coding]","LOC655982; TcasGA2_TC001977"]
[1879,"NW_015450315.1",81501,"SNV","C","T","Homozygous",20,20,100,1,11,10,0.48,37.55,21,21,13,15,null,1,1,"no","T/T","No",1,81.69,"XP_001810078.1:c.4028G>A","XP_001810078.1:p.Arg1343His","LOC100142562",100142562,null,"100142562 [Gene Symbol: LOC100142562] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 297] [Gene Type: protein-coding]","LOC100142562"]
[1882,"NW_015450315.1",82559,"SNV","A","T","Heterozygous",10,20,50,1,4,6,0.4,38.7,10,20,6,8,1.51,0.35,1,"no","A/T","No",1,81.47,"XP_001810078.1:c.2970T>A","XP_001810078.1:p.Asn990Lys","LOC100142562",100142562,null,"100142562 [Gene Symbol: LOC100142562] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 297] [Gene Type: protein-coding]","LOC100142562"]
[1883,"NW_015450315.1",84171,"SNV","A","G","Heterozygous",9,28,32.14,1,7,5,0.42,37.89,12,32,7,7,-0.37,0.29,0.97,"no","A/G","No",1,50.52,"XP_001810078.1:c.1358T>C","XP_001810078.1:p.Val453Ala","LOC100142562",100142562,null,"100142562 [Gene Symbol: LOC100142562] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: retrovirus-related Pol polyprotein from transposon 297] [Gene Type: protein-coding]","LOC100142562"]
[1884,"NW_015450366.1","2812..2813","MNV","CT","TC","Heterozygous",6,24,25,1,5,1,0.17,39.75,6,24,4,4,2.2,0.09,0.45,"no","complex","No",1,200,"XP_015839907.1:c.[587_588delCTinsTC]; XP_015839908.1:c.[587_588delCTinsTC]; XP_015839906.1:c.[587_588delCTinsTC]","XP_015839907.1:p.[Pro196Leu]; XP_015839908.1:p.[Pro196Leu]; XP_015839906.1:p.[Pro196Leu]","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1885,"NW_015450366.1",2931,"SNV","A","G","Heterozygous",14,32,43.75,1,8,8,0.5,37.57,16,37,13,13,0.17,1,1,"no","A/G","No",1,103.16,"XP_015839907.1:c.[603+103A>G]; XP_015839908.1:c.[603+103A>G]; XP_015839906.1:c.[706A>G]","XP_015839906.1:p.Ile236Val","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1886,"NW_015450366.1",2934,"SNV","A","G","Heterozygous",14,36,38.89,1,8,8,0.5,39.57,16,42,13,13,0.37,0.95,1,"no","A/G","No",1,92.06,"XP_015839908.1:c.[603+106A>G]; XP_015839907.1:c.[603+106A>G]; XP_015839906.1:c.[709A>G]","XP_015839906.1:p.Lys237Glu","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1887,"NW_015450366.1",2952,"SNV","G","C","Heterozygous",18,45,40,1,10,10,0.5,38.22,20,54,15,16,0.89,0.89,0.93,"no","C/G","No",1,116.93,"XP_015839907.1:c.[603+124G>C]; XP_015839906.1:c.[727G>C]; XP_015839908.1:c.[603+124G>C]","XP_015839906.1:p.Ala243Pro","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1888,"NW_015450366.1",2961,"SNV","C","T","Heterozygous",14,46,30.43,1,9,7,0.44,38.71,16,54,11,12,0.87,0.88,0.87,"no","C/T","No",1,62.86,"XP_015839907.1:c.[603+133C>T]; XP_015839906.1:c.[736C>T]; XP_015839908.1:c.[603+133C>T]","XP_015839906.1:p.Pro246Ser","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1889,"NW_015450366.1",2986,"SNV","T","G","Heterozygous",12,37,32.43,1,6,7,0.46,38.58,13,39,8,8,-0.02,0.58,1,"no","G/T","No",1,63.35,"XP_015839907.1:c.[603+158T>G]; XP_015839906.1:c.[761T>G]; XP_015839908.1:c.[603+158T>G]","XP_015839906.1:p.Met254Arg","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1890,"NW_015450366.1",2998,"SNV","A","C","Heterozygous",13,31,41.94,1,7,6,0.46,37.38,13,33,9,9,-0.12,0.73,0.97,"no","A/C","No",1,92.97,"XP_015839907.1:c.[603+170A>C]; XP_015839908.1:c.[603+170A>C]; XP_015839906.1:c.[773A>C]","XP_015839906.1:p.*258Ser","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1892,"NW_015450366.1",4677,"SNV","G","A","Homozygous",24,25,96,1,15,11,0.42,37.71,26,27,12,16,null,1,1,"no","A/A","No",1,64.65,"XP_015839907.1:c.[641G>A]; XP_015839908.1:c.[604-794G>A]","XP_015839907.1:p.Arg214His","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1893,"NW_015450366.1",4733,"SNV","C","T","Heterozygous",13,21,61.9,1,4,9,0.31,37.15,13,22,8,12,-0.47,0.91,0.99,"no","C/T","No",1,57.44,"XP_015839908.1:c.[604-738C>T]; XP_015839907.1:c.[697C>T]","XP_015839907.1:p.His233Tyr","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1894,"NW_015450438.1",73231,"SNV","A","G","Homozygous",30,30,100,1,22,14,0.39,37.33,36,36,15,18,null,1,1,"no","G/G","No",1,110.18,"XP_008201414.1:c.[511A>G]; XP_971439.1:c.[514A>G]","XP_008201414.1:p.[Ile171Val]; XP_971439.1:p.[Ile172Val]","LOC660084",660084,null,"660084 [Gene Symbol: LOC660084] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: protein Wnt-8a] [Gene Type: protein-coding]","LOC660084; Wnt8/D"]
[1895,"NW_015450438.1",93416,"SNV","A","C","Heterozygous",13,34,38.24,1,11,2,0.15,38.62,13,36,8,12,-0.94,0.91,0.88,"no","A/C","No",1,84.67,"XP_015839917.1:c.[664T>G]; XP_015839918.1:c.[565T>G]","XP_015839917.1:p.[*222Glu]; XP_015839918.1:p.[*189Glu]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1896,"NW_015450438.1",93457,"SNV","T","C","Homozygous",21,21,100,1,17,5,0.23,37.43,22,22,11,17,null,1,1,"no","C/C","No",1,83.13,"XP_015839918.1:c.[524A>G]; XP_015839917.1:c.[623A>G]","XP_015839918.1:p.[Glu175Gly]; XP_015839917.1:p.[Glu208Gly]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1897,"NW_015450438.1",93464,"SNV","C","T","Heterozygous",9,20,45,1,8,4,0.33,36,12,24,4,9,-1.14,0.6,1,"no","C/T","No",1,71.72,"XP_015839918.1:c.[517G>A]; XP_015839917.1:c.[616G>A]","XP_015839918.1:p.[Asp173Asn]; XP_015839917.1:p.[Asp206Asn]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1898,"NW_015450438.1",93470,"SNV","T","C","Heterozygous",11,22,50,1,8,6,0.43,36.09,14,26,5,10,-1.51,0.68,0.97,"no","C/T","No",1,89.14,"XP_015839917.1:c.[610A>G]; XP_015839918.1:c.[511A>G]","XP_015839917.1:p.[Ile204Val]; XP_015839918.1:p.[Ile171Val]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1899,"NW_015450438.1",93533,"SNV","G","A","Heterozygous",18,35,51.43,1,9,10,0.47,38.67,19,36,12,13,-0.81,0.35,0.96,"no","A/G","No",1,132.75,"XP_015839918.1:c.[448C>T]; XP_015839917.1:c.[547C>T]","XP_015839918.1:p.[Pro150Ser]; XP_015839917.1:p.[Pro183Ser]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1900,"NW_015450438.1",93810,"SNV","C","T","Homozygous",29,29,100,1,6,24,0.2,37.83,30,30,20,15,null,1,1,"no","T/T","No",1,108.77,"XP_015839917.1:c.[325G>A]; XP_015839918.1:c.[226G>A]","XP_015839917.1:p.[Ala109Thr]; XP_015839918.1:p.[Ala76Thr]","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1902,"NW_015450438.1","94120..94123","Deletion","GTAA","-","Heterozygous",9,22,40.91,1,2,8,0.2,37.11,10,23,7,9,-4.84,0.27,0.93,"no","complex","No",1,200,"XP_015839917.1:c.[71_74delTTAC]; XP_015839918.1:c.[16-44_16-41delTTAC]","XP_015839917.1:p.Leu24fs","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1903,"NW_015450438.1",94130,"SNV","T","G","Heterozygous",10,23,43.48,1,3,8,0.27,38.4,11,24,6,8,-0.25,0.27,0.86,"no","G/T","No",1,76.8,"XP_015839918.1:c.[16-51A>C]; XP_015839917.1:c.[64A>C]","XP_015839917.1:p.Asn22His","LOC107398878",107398878,null,"107398878 [Gene Symbol: LOC107398878] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398878] [Gene Type: protein-coding]","LOC107398878"]
[1904,"NW_015450462.1",11443,"SNV","C","G","Homozygous",32,32,100,1,24,12,0.33,38.34,36,36,17,25,null,1,1,"no","G/G","No",1,116.2,"XP_015839928.1:c.195C>G","XP_015839928.1:p.Ser65Arg","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1905,"NW_015450462.1",12310,"SNV","T","C","Homozygous",26,26,100,1,17,16,0.48,38.5,33,33,17,20,null,1,1,"no","C/C","No",1,98.16,"XP_015839928.1:c.871T>C","XP_015839928.1:p.*291Gln","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1907,"NW_015450462.1",12752,"SNV","C","T","Homozygous",41,41,100,1,19,28,0.4,38.27,47,47,21,24,null,1,1,"no","T/T","No",1,144.63,"XP_015839928.1:c.1313C>T","XP_015839928.1:p.Thr438Ile","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1908,"NW_015450462.1",12812,"SNV","T","C","Homozygous",33,33,100,1,18,18,0.5,38,36,36,19,25,null,1,1,"no","C/C","No",1,119.24,"XP_015839928.1:c.1373T>C","XP_015839928.1:p.Phe458Ser","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1909,"NW_015450462.1",17188,"SNV","C","G","Homozygous",30,30,100,1,12,19,0.39,37.57,31,31,16,19,null,1,1,"no","G/G","No",1,110.19,"XP_015839928.1:c.1748C>G","XP_015839928.1:p.Ala583Gly","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1910,"NW_015450462.1",18351,"SNV","G","C","Homozygous",25,25,100,1,14,15,0.48,37.52,29,29,15,15,null,1,1,"no","C/C","No",1,95.16,"XP_015839928.1:c.2633G>C","XP_015839928.1:p.*878Ser","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1911,"NW_015450462.1",20903,"SNV","C","T","Homozygous",29,29,100,1,16,17,0.48,37.83,33,33,17,17,null,1,1,"no","T/T","No",1,108.77,"XP_015839928.1:c.3437C>T","XP_015839928.1:p.Thr1146Met","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1913,"NW_015450592.1",6829,"SNV","C","G","Homozygous",21,21,100,1,16,10,0.38,35.57,26,26,12,16,null,1,1,"no","G/G","No",1,83.1,"XP_015839966.1:c.[490C>G]; XP_971501.1:c.[490C>G]","XP_015839966.1:p.[Leu164Val]; XP_971501.1:p.[Leu164Val]","LOC660149",660149,null,"660149 [Gene Symbol: LOC660149] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: protein regulator of cytokinesis 1] [Gene Type: protein-coding]","LOC660149"]
[1914,"NW_015450599.1",12609,"SNV","C","T","Heterozygous",9,22,40.91,1,6,4,0.4,40,10,26,6,6,1.14,0.7,0.89,"no","C/T","No",1,66.01,"XP_008195700.1:c.[944C>T]; XP_015839974.1:c.[1364C>T]","XP_008195700.1:p.[Ala315Val]; XP_015839974.1:p.[Ala455Val]","LOC103313649",103313649,null,"103313649 [Gene Symbol: LOC103313649] [Locus Tag: TcasGA2_TC032692] [Chromosome: Un] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","TcasGA2_TC032692; LOC103313649"]
[1915,"NW_015450599.1",52428,"SNV","A","T","Heterozygous",10,20,50,1,3,8,0.27,40.1,11,23,7,7,1.17,0.52,1,"no","A/T","No",1,81.48,"XP_015839972.1:c.[154T>A]; XP_008194708.1:c.[154T>A]; XP_015839973.1:c.[154T>A]; XP_008194256.1:c.[154T>A]; XP_008193772.1:c.[154T>A]; XP_008192782.1:c.[154T>A]; XP_015839970.1:c.[154T>A]; XP_008193269.1:c.[154T>A]; XP_967383.2:c.[154T>A]","XP_015839972.1:p.[Leu52Met]; XP_008194708.1:p.[Leu52Met]; XP_015839973.1:p.[Leu52Met]; XP_008194256.1:p.[Leu52Met]; XP_008193772.1:p.[Leu52Met]; XP_008192782.1:p.[Leu52Met]; XP_015839970.1:p.[Leu52Met]; XP_008193269.1:p.[Leu52Met]; XP_967383.2:p.[Leu52Met]","LOC655731",655731,null,"655731 [Gene Symbol: LOC655731] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","LOC655731"]
[1916,"NW_015450599.1",52449,"SNV","C","T","Heterozygous",8,20,40,1,2,7,0.22,39.25,9,25,6,5,0.58,0.18,0.86,"no","C/T","No",1,58.87,"XP_008192782.1:c.[133G>A]; XP_015839972.1:c.[133G>A]; XP_008193772.1:c.[133G>A]; XP_967383.2:c.[133G>A]; XP_008194256.1:c.[133G>A]; XP_015839970.1:c.[133G>A]; XP_008193269.1:c.[133G>A]; XP_008194708.1:c.[133G>A]; XP_015839973.1:c.[133G>A]","XP_008192782.1:p.[Asp45Asn]; XP_015839972.1:p.[Asp45Asn]; XP_008193772.1:p.[Asp45Asn]; XP_967383.2:p.[Asp45Asn]; XP_008194256.1:p.[Asp45Asn]; XP_015839970.1:p.[Asp45Asn]; XP_008193269.1:p.[Asp45Asn]; XP_008194708.1:p.[Asp45Asn]; XP_015839973.1:p.[Asp45Asn]","LOC655731",655731,null,"655731 [Gene Symbol: LOC655731] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","LOC655731"]
[1917,"NW_015450599.1",52467,"SNV","C","G","Heterozygous",8,21,38.1,1,2,7,0.22,38.62,9,25,6,5,-0.04,0.2,0.94,"no","C/G","No",1,56.15,"XP_967383.2:c.[115G>C]; XP_015839970.1:c.[115G>C]; XP_008194708.1:c.[115G>C]; XP_008193772.1:c.[115G>C]; XP_008193269.1:c.[115G>C]; XP_008192782.1:c.[115G>C]; XP_008194256.1:c.[115G>C]; XP_015839972.1:c.[115G>C]; XP_015839973.1:c.[115G>C]","XP_967383.2:p.[Asp39His]; XP_015839970.1:p.[Asp39His]; XP_008194708.1:p.[Asp39His]; XP_008193772.1:p.[Asp39His]; XP_008193269.1:p.[Asp39His]; XP_008192782.1:p.[Asp39His]; XP_008194256.1:p.[Asp39His]; XP_015839972.1:p.[Asp39His]; XP_015839973.1:p.[Asp39His]","LOC655731",655731,null,"655731 [Gene Symbol: LOC655731] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","LOC655731"]
[1918,"NW_015450610.1",499,"SNV","G","C","Homozygous",27,27,100,1,13,16,0.45,37.41,29,29,16,19,null,1,1,"no","C/C","No",1,101.18,"XP_015839981.1:c.1283C>G","XP_015839981.1:p.Thr428Arg","LOC107398923",107398923,null,"107398923 [Gene Symbol: LOC107398923] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398923] [Gene Type: protein-coding]","LOC107398923"]
[1919,"NW_015450610.1",699,"SNV","C","T","Heterozygous",25,36,69.44,1,12,14,0.46,38.16,26,39,11,13,2.83,0.32,0.97,"no","C/T","No",1,53.74,"XP_015839981.1:c.[1083G>A]; XP_015839982.1:c.[1028G>A]","XP_015839982.1:p.[Arg343Lys]","LOC107398923",107398923,null,"107398923 [Gene Symbol: LOC107398923] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398923] [Gene Type: protein-coding]","LOC107398923"]
[1920,"NW_015450610.1",1354,"SNV","C","G","Homozygous",33,33,100,1,25,11,0.31,36.55,36,36,18,22,null,1,1,"no","G/G","No",1,119.21,"XP_015839981.1:c.[475G>C]; XP_015839982.1:c.[475G>C]","XP_015839981.1:p.[Ala159Pro]; XP_015839982.1:p.[Ala159Pro]","LOC107398923",107398923,null,"107398923 [Gene Symbol: LOC107398923] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398923] [Gene Type: protein-coding]","LOC107398923"]
[1922,"NW_015450679.1",12121,"SNV","T","G","Heterozygous",9,20,45,1,4,6,0.4,38.22,10,21,4,5,0.63,0.21,0.51,"no","G/T","No",1,58.64,"XP_015839988.1:c.1926A>C","XP_015839988.1:p.Glu642Asp","LOC107398928",107398928,null,"107398928 [Gene Symbol: LOC107398928] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398928] [Gene Type: protein-coding]","LOC107398928"]
[1924,"NW_015450679.1",13177,"SNV","T","A","Heterozygous",17,26,65.38,1,7,10,0.41,38.41,17,26,9,14,2.48,0.9,1,"no","A/T","No",1,55.14,"XP_015839988.1:c.870A>T","XP_015839988.1:p.Glu290Asp","LOC107398928",107398928,null,"107398928 [Gene Symbol: LOC107398928] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398928] [Gene Type: protein-coding]","LOC107398928"]
[1925,"NW_015450679.1",13314,"SNV","A","C","Heterozygous",20,33,60.61,1,14,7,0.33,37.9,21,34,12,12,-0.72,0.68,1,"no","A/C","No",1,82.96,"XP_015839988.1:c.733T>G","XP_015839988.1:p.Leu245Val","LOC107398928",107398928,null,"107398928 [Gene Symbol: LOC107398928] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398928] [Gene Type: protein-coding]","LOC107398928"]
[1927,"NW_015450689.1",70511,"SNV","T","C","Homozygous",20,20,100,1,10,10,0.5,37.1,20,20,14,15,null,1,1,"no","C/C","No",1,80.12,"XP_969159.1:c.2077T>C","XP_969159.1:p.Phe693Leu","LOC657615",657615,null,"657615 [Gene Symbol: LOC657615] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: SCY1-like protein 2] [Gene Type: protein-coding]","LOC657615"]
[1928,"NW_015450689.1",86526,"SNV","T","A","Homozygous",20,20,100,1,15,5,0.25,38.25,20,20,9,17,null,1,1,"no","A/A","No",1,81.69,"XP_968867.1:c.394T>A","XP_968867.1:p.Cys132Ser","LOC657307",657307,null,"657307 [Gene Symbol: LOC657307] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: cellular tumor antigen p53] [Gene Type: protein-coding]","LOC657307"]
[1929,"NW_015450689.1",86641,"SNV","G","C","Homozygous",20,20,100,1,5,17,0.23,37.3,22,22,9,12,null,1,1,"no","C/C","No",1,80.12,"XP_968867.1:c.509G>C","XP_968867.1:p.Ser170Thr","LOC657307",657307,null,"657307 [Gene Symbol: LOC657307] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: cellular tumor antigen p53] [Gene Type: protein-coding]","LOC657307"]
[1930,"NW_015450712.1","574..578","Replacement","ACCAC","GGT","Heterozygous",6,21,28.57,1,3,3,0.5,35.57,6,22,4,4,-2.31,0.39,0.91,"no","complex","No",1,200,"XP_008200092.1:c.227_231delGTGGTinsACC","XP_008200092.1:p.Cys76fs","LOC103314835",103314835,null,"103314835 [Gene Symbol: LOC103314835] [Locus Tag: TcasGA2_TC031666] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314835] [Gene Type: protein-coding]","LOC103314835; TcasGA2_TC031666"]
[1931,"NW_015450712.1","646..648","Deletion","CAC","-","Heterozygous",7,20,35,1,4,3,0.43,36.14,7,20,5,5,-2.03,0.32,0.56,"no","complex","No",1,200,"XP_008200092.1:c.157_159delGTG","XP_008200092.1:p.Val53del","LOC103314835",103314835,null,"103314835 [Gene Symbol: LOC103314835] [Locus Tag: TcasGA2_TC031666] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314835] [Gene Type: protein-coding]","LOC103314835; TcasGA2_TC031666"]
[1932,"NW_015450712.1",719,"SNV","T","A","Heterozygous",9,20,45,1,4,6,0.4,35.89,10,21,8,7,-0.91,0.84,0.99,"no","A/T","No",1,71.69,"XP_008200092.1:c.86A>T","XP_008200092.1:p.Glu29Val","LOC103314835",103314835,null,"103314835 [Gene Symbol: LOC103314835] [Locus Tag: TcasGA2_TC031666] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314835] [Gene Type: protein-coding]","LOC103314835; TcasGA2_TC031666"]
[1934,"NW_015450712.1",11213,"SNV","C","A","Homozygous",21,21,100,1,13,10,0.43,38.29,23,23,13,15,null,1,1,"no","A/A","No",1,84.7,"XP_015840002.1:c.550G>T","XP_015840002.1:p.Val184Phe","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1935,"NW_015450712.1",11299,"SNV","C","T","Homozygous",20,20,100,1,12,13,0.48,38.45,25,25,14,15,null,1,1,"no","T/T","No",1,81.69,"XP_015840002.1:c.464G>A","XP_015840002.1:p.Arg155Lys","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1936,"NW_015450712.1",11391,"SNV","A","T","Homozygous",27,27,100,1,18,10,0.36,38.56,28,28,16,22,null,1,1,"no","T/T","No",1,102.75,"XP_015840002.1:c.372T>A","XP_015840002.1:p.Asn124Lys","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1937,"NW_015450712.1",11558,"SNV","C","T","Heterozygous",13,32,40.62,1,6,7,0.46,39.54,13,33,7,10,2.19,0.48,1,"no","C/T","No",1,89.13,"XP_015840002.1:c.205G>A","XP_015840002.1:p.Gly69Ser","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1938,"NW_015450712.1",11561,"SNV","C","G","Heterozygous",15,34,44.12,1,8,7,0.47,39.6,15,35,8,12,0.69,0.52,0.98,"no","C/G","No",1,109.36,"XP_015840002.1:c.202G>C","XP_015840002.1:p.Ala68Pro","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1939,"NW_015450712.1","11570^11571","Insertion","-","TGG","Heterozygous",10,34,29.41,1,6,4,0.4,38.93,10,35,6,9,2.7,0.74,0.86,"no","complex","No",1,200,"XP_015840002.1:c.192_193insCCA","XP_015840002.1:p.Pro64_Ser65insPro","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1940,"NW_015450712.1",11572,"SNV","G","T","Heterozygous",19,33,57.58,1,8,12,0.4,38.58,20,34,9,14,1.71,0.8,1,"no","G/T","No",1,99.95,"XP_015840002.1:c.191C>A","XP_015840002.1:p.Pro64Gln","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1941,"NW_015450712.1",11599,"SNV","G","A","Heterozygous",14,28,50,1,7,8,0.47,36.14,15,29,6,9,-2.16,0.83,0.96,"no","A/G","No",1,110.74,"XP_015840002.1:c.164C>T","XP_015840002.1:p.Thr55Ile","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1942,"NW_015450712.1",11659,"SNV","T","A","Heterozygous",13,24,54.17,1,3,10,0.23,36.15,13,24,5,7,0.29,0.76,1,"no","A/T","No",1,86.23,"XP_015840002.1:c.104A>T","XP_015840002.1:p.Gln35Leu","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1943,"NW_015450712.1",11704,"SNV","T","A","Heterozygous",13,30,43.33,1,1,12,0.08,40.15,13,30,6,6,1.59,0.51,0.5,"no","A/T","No",1,94.85,"XP_015840002.1:c.59A>T","XP_015840002.1:p.Lys20Met","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1944,"NW_015450712.1",11738,"SNV","A","C","Homozygous",32,32,100,1,16,20,0.44,38.75,36,36,16,15,null,1,1,"no","C/C","No",1,113.22,"XP_015840002.1:c.25T>G","XP_015840002.1:p.Leu9Val","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1946,"NW_015450720.1",53481,"SNV","T","C","Homozygous",22,22,100,1,2,22,0.08,38.27,24,24,11,10,null,1,1,"no","C/C","No",1,86.13,"XP_015840006.1:c.[1863A>G]; XP_015840007.1:c.[1809A>G]","XP_015840006.1:p.[*621Trp]; XP_015840007.1:p.[*603Trp]","LOC107398935",107398935,null,"107398935 [Gene Symbol: LOC107398935] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398935] [Gene Type: protein-coding]","LOC107398935"]
[1948,"NW_015450873.1",1784,"SNV","G","C","Heterozygous",14,24,58.33,1,8,8,0.5,40.07,16,27,10,14,2.05,0.88,1,"no","C/G","No",1,73.32,"XP_015840030.1:c.248G>C","XP_015840030.1:p.Gly83Ala","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1949,"NW_015450873.1",1834,"SNV","C","T","Heterozygous",15,27,55.56,1,7,11,0.39,39,18,30,11,12,1.49,0.91,0.98,"no","C/T","No",1,91.75,"XP_015840030.1:c.298C>T","XP_015840030.1:p.Gln100*","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1950,"NW_015450873.1","2029..2030","Deletion","AG","-","Heterozygous",9,20,45,1,5,4,0.44,38.67,9,20,7,8,-1.63,0.77,0.96,"no","complex","No",1,200,"XP_015840030.1:c.493_494delAG","XP_015840030.1:p.Arg165fs","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1951,"NW_015450873.1",2209,"SNV","T","A","Heterozygous",11,21,52.38,1,8,4,0.33,39.55,12,24,8,7,2.57,0.23,0.9,"no","A/T","No",1,81.57,"XP_015840030.1:c.673T>A","XP_015840030.1:p.Tyr225Asn","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1953,"NW_015450873.1",7092,"SNV","A","T","Heterozygous",14,25,56,1,3,13,0.19,39.86,16,29,10,10,0.38,0.61,0.46,"no","A/T","No",1,83.25,"XP_015840028.1:c.2107T>A","XP_015840028.1:p.Leu703Ile","LOC103315075",103315075,null,"103315075 [Gene Symbol: LOC103315075] [Locus Tag: TcasGA2_TC032978] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315075] [Gene Type: protein-coding]","LOC103315075; TcasGA2_TC032978"]
[1955,"NW_015450873.1",7244,"SNV","A","G","Heterozygous",11,24,45.83,1,5,6,0.45,36.91,11,24,7,7,-0.98,0.75,0.98,"no","A/G","No",1,87.18,"XP_015840028.1:c.1955T>C","XP_015840028.1:p.Ile652Thr","LOC103315075",103315075,null,"103315075 [Gene Symbol: LOC103315075] [Locus Tag: TcasGA2_TC032978] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315075] [Gene Type: protein-coding]","LOC103315075; TcasGA2_TC032978"]
[1956,"NW_015450873.1","8692..8693","MNV","TC","CG","Heterozygous",7,21,33.33,1,5,3,0.38,40.5,8,22,6,7,0.99,0.88,0.99,"no","complex","No",1,200,"XP_015840028.1:c.506_507delGAinsCG","XP_015840028.1:p.Arg169Thr","LOC103315075",103315075,null,"103315075 [Gene Symbol: LOC103315075] [Locus Tag: TcasGA2_TC032978] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315075] [Gene Type: protein-coding]","LOC103315075; TcasGA2_TC032978"]
[1959,"NW_015450887.1",4272,"SNV","T","G","Heterozygous",21,43,48.84,1,13,8,0.38,39.86,21,45,12,16,0.58,0.84,1,"no","G/T","No",1,200,"XP_015840032.1:c.691A>C","XP_015840032.1:p.Lys231Gln","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1961,"NW_015450887.1",4325,"SNV","G","A","Heterozygous",15,41,36.59,1,10,5,0.33,39.13,15,46,10,11,0.62,0.22,0.99,"no","A/G","No",1,89.54,"XP_015840032.1:c.638C>T","XP_015840032.1:p.Pro213Leu","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1962,"NW_015450887.1","4399..4400","MNV","GG","AA","Heterozygous",12,52,23.08,1,5,7,0.42,39.92,12,60,8,10,0.46,0.37,0.92,"no","complex","No",1,200,"XP_015840032.1:c.563_564delCCinsTT","XP_015840032.1:p.Thr188Ile","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1963,"NW_015450887.1",4584,"SNV","T","G","Heterozygous",19,67,28.36,1,10,12,0.45,38.95,22,76,15,13,-0.01,0.42,0.99,"no","G/T","No",1,69.21,"XP_015840032.1:c.379A>C","XP_015840032.1:p.Lys127Gln","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1971,"NW_015450890.1",116452,"SNV","C","G","Heterozygous",12,38,31.58,1,1,11,0.08,39.08,12,41,4,5,0.08,0.36,0.22,"no","C/G","No",1,59.88,"XP_008197926.1:c.1196G>C","XP_008197926.1:p.Ser399Thr","LOC103314246",103314246,null,"103314246 [Gene Symbol: LOC103314246] [Locus Tag: TcasGA2_TC031715] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey] [Gene Type: protein-coding]","LOC103314246; TcasGA2_TC031715"]
[1972,"NW_015450917.1","20451..20452","MNV","TG","CA","Heterozygous",8,23,34.78,1,8,2,0.2,38.31,10,25,5,6,null,0.17,0.34,"no","complex","No",1,200,"XP_008200678.2:c.1614_1615delTGinsCA","XP_008200678.2:p.Glu539Lys","LOC657155",657155,null,"657155 [Gene Symbol: LOC657155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: polycomb group protein Psc] [Gene Type: protein-coding]","LOC657155"]
[1973,"NW_015450917.1",20536,"SNV","A","G","Heterozygous",16,35,45.71,1,13,5,0.28,37.06,18,40,9,9,1.67,0.34,0.46,"no","A/G","No",1,110.33,"XP_008200678.2:c.1699A>G","XP_008200678.2:p.Thr567Ala","LOC657155",657155,null,"657155 [Gene Symbol: LOC657155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: polycomb group protein Psc] [Gene Type: protein-coding]","LOC657155"]
[1974,"NW_015450917.1",20951,"SNV","T","C","Heterozygous",11,20,55,1,6,6,0.5,38.27,12,25,7,8,3,0.18,1,"no","C/T","No",1,71.7,"XP_008200678.2:c.2114T>C","XP_008200678.2:p.Leu705Pro","LOC657155",657155,null,"657155 [Gene Symbol: LOC657155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: polycomb group protein Psc] [Gene Type: protein-coding]","LOC657155"]
[1975,"NW_015450917.1",21262,"SNV","G","A","Heterozygous",15,26,57.69,1,0,15,0,37.27,15,26,6,7,0.8,0.2,0.19,"no","A/G","No",1,81.61,"XP_008200678.2:c.2425G>A","XP_008200678.2:p.Glu809Lys","LOC657155",657155,null,"657155 [Gene Symbol: LOC657155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: polycomb group protein Psc] [Gene Type: protein-coding]","LOC657155"]
[1977,"NW_015450959.1",12059,"SNV","T","C","Heterozygous",9,28,32.14,1,9,0,0,38.44,9,28,5,7,0.93,0.69,1,"no","C/T","No",1,50.65,"XP_008199420.1:c.47A>G","XP_008199420.1:p.Tyr16Cys","LOC103314659",103314659,null,"103314659 [Gene Symbol: LOC103314659] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: protein spaetzle-like] [Gene Type: protein-coding]","LOC103314659"]
[1978,"NW_015450959.1",13219,"SNV","T","C","Heterozygous",22,32,68.75,1,1,21,0.05,40,22,36,12,12,3.52,0.17,0.22,"no","C/T","No",1,51.11,"XP_015840048.1:c.53A>G","XP_015840048.1:p.Asp18Gly","LOC103314665",103314665,null,"103314665 [Gene Symbol: LOC103314665] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: protein spaetzle-like] [Gene Type: protein-coding]","LOC103314665"]
[1980,"NW_015450989.1",103583,"SNV","T","G","Homozygous",21,21,100,1,3,20,0.13,36.62,23,23,10,13,null,1,1,"no","G/G","No",1,83.1,"XP_015840072.1:c.[3555A>C]; XP_015840073.1:c.[3555A>C]; XP_015840074.1:c.[3525A>C]","XP_015840072.1:p.[Gln1185His]; XP_015840073.1:p.[Gln1185His]; XP_015840074.1:p.[Gln1175His]","LOC103315105",103315105,null,"103315105 [Gene Symbol: LOC103315105] [Locus Tag: TcasGA2_TC031745] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315105] [Gene Type: protein-coding]","LOC103315105; TcasGA2_TC031745"]
[1981,"NW_015450989.1",109010,"SNV","C","A","Homozygous",22,22,100,1,12,11,0.48,39.36,23,23,14,13,null,1,1,"no","A/A","No",1,87.7,"XP_015840072.1:c.[1951G>T]; XP_015840073.1:c.[1951G>T]; XP_015840074.1:c.[1921G>T]","XP_015840072.1:p.[Val651Leu]; XP_015840073.1:p.[Val651Leu]; XP_015840074.1:p.[Val641Leu]","LOC103315105",103315105,null,"103315105 [Gene Symbol: LOC103315105] [Locus Tag: TcasGA2_TC031745] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315105] [Gene Type: protein-coding]","LOC103315105; TcasGA2_TC031745"]
[1986,"NW_015451146.1",4025,"SNV","C","G","Heterozygous",20,64,31.25,1,17,8,0.32,37.9,25,73,12,12,0.21,0.93,1,"no","C/G","No",1,97.58,"XP_008192463.1:c.1798G>C","XP_008192463.1:p.Gly600Arg","LOC103312772",103312772,null,"103312772 [Gene Symbol: LOC103312772] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312772] [Gene Type: protein-coding]","LOC103312772"]
[1987,"NW_015451146.1",4202,"SNV","C","T","Heterozygous",11,34,32.35,1,0,11,0,38.27,11,34,5,9,1.99,0.36,1,"no","C/T","No",1,58.14,"XP_008192463.1:c.1621G>A","XP_008192463.1:p.Gly541Ser","LOC103312772",103312772,null,"103312772 [Gene Symbol: LOC103312772] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312772] [Gene Type: protein-coding]","LOC103312772"]
[1989,"NW_015451146.1",11234,"SNV","C","T","Heterozygous",5,24,20.83,1,0,5,0,39.6,5,24,2,4,0.85,0.07,0.05,"no","complex","No",1,93.71,"XP_015840145.1:c.598G>A","XP_015840145.1:p.Asp200Asn","LOC107399018",107399018,null,"107399018 [Gene Symbol: LOC107399018] [Locus Tag: TcasGA2_TC031710] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399018] [Gene Type: protein-coding]","TcasGA2_TC031710; LOC107399018"]
[1990,"NW_015451146.1",11235,"SNV","C","G","Heterozygous",7,27,25.93,1,7,0,0,38.86,7,27,4,5,0.86,0.55,0.18,"no","complex","No",1,200,"XP_015840145.1:c.597G>C","XP_015840145.1:p.Gln199His","LOC107399018",107399018,null,"107399018 [Gene Symbol: LOC107399018] [Locus Tag: TcasGA2_TC031710] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399018] [Gene Type: protein-coding]","TcasGA2_TC031710; LOC107399018"]
[1991,"NW_015451146.1",13252,"SNV","T","C","Homozygous",49,49,100,1,30,24,0.44,39.1,54,54,33,37,null,1,1,"no","C/C","No",1,200,"XP_008192464.1:c.1261A>G","XP_008192464.1:p.Lys421Glu","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1993,"NW_015451146.1",13489,"SNV","G","A","Heterozygous",14,41,34.15,1,4,11,0.27,38.43,15,45,9,9,-0.45,0.49,0.81,"no","A/G","No",1,76.96,"XP_008192464.1:c.1024C>T","XP_008192464.1:p.Leu342Phe","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1994,"NW_015451146.1",13950,"SNV","C","T","Homozygous",46,46,100,1,23,27,0.46,39.28,50,50,28,27,null,1,1,"no","T/T","No",1,159.55,"XP_008192464.1:c.563G>A","XP_008192464.1:p.Arg188Lys","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1997,"NW_015451234.1",12258,"SNV","G","A","Heterozygous",17,26,65.38,1,11,12,0.48,37.35,23,32,11,12,0.03,0.86,0.92,"no","A/G","No",1,56.06,"XP_008201045.1:c.968C>T","XP_008201045.1:p.Thr323Ile","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1998,"NW_015451264.1",9518,"Deletion","A","-","Heterozygous",12,26,46.15,1,8,4,0.33,37.17,12,28,8,4,-0.67,0.12,0.55,"no","-/A","Yes",10,92.42,"XP_015840154.1:c.475delA","XP_015840154.1:p.Ile162fs","LOC107399024",107399024,null,"107399024 [Gene Symbol: LOC107399024] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399024] [Gene Type: protein-coding]","LOC107399024"]
[2000,"NW_015451351.1",4994,"SNV","A","T","Heterozygous",10,32,31.25,1,8,3,0.27,39.1,11,40,6,7,1.36,0.59,0.65,"no","A/T","No",1,51.12,"XP_015840159.1:c.1194T>A","XP_015840159.1:p.Ser398Arg","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2002,"NW_015451351.1",5161,"SNV","T","C","Heterozygous",15,26,57.69,1,8,14,0.36,36.47,22,35,9,8,-1.19,0.89,1,"no","C/T","No",1,80.4,"XP_015840159.1:c.1027A>G","XP_015840159.1:p.Asn343Asp","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2003,"NW_015451351.1",5182,"SNV","T","A","Heterozygous",13,29,44.83,1,7,7,0.5,37.62,14,36,9,8,-1.12,0.6,1,"no","A/T","No",1,97.68,"XP_015840159.1:c.1006A>T","XP_015840159.1:p.Thr336Ser","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2004,"NW_015451351.1",5350,"SNV","G","A","Homozygous",22,22,100,1,20,4,0.17,38.27,24,24,17,18,null,1,1,"no","A/A","No",1,87.71,"XP_015840159.1:c.838C>T","XP_015840159.1:p.Arg280Trp","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2007,"NW_015451351.1",5635,"SNV","T","C","Heterozygous",17,31,54.84,1,11,11,0.5,39.06,22,39,12,12,0.04,0.54,0.95,"no","C/T","No",1,104.7,"XP_015840159.1:c.553A>G","XP_015840159.1:p.Lys185Glu","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2008,"NW_015451351.1",5638,"SNV","T","C","Heterozygous",10,30,33.33,1,8,4,0.33,38.8,12,37,10,9,0.11,0.75,0.98,"no","C/T","No",1,57.9,"XP_015840159.1:c.550A>G","XP_015840159.1:p.Ile184Val","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2011,"NW_015451351.1",5661,"SNV","G","T","Heterozygous",11,31,35.48,1,9,3,0.25,40.09,12,41,9,11,3.1,0.21,0.58,"no","G/T","No",1,63.16,"XP_015840159.1:c.527C>A","XP_015840159.1:p.Thr176Lys","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2013,"NW_015451351.1",5676,"SNV","T","C","Heterozygous",7,24,29.17,1,6,1,0.14,40.43,7,29,5,7,3.11,0.22,0.29,"no","complex","No",1,200,"XP_015840159.1:c.512A>G","XP_015840159.1:p.Asp171Gly","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2014,"NW_015451351.1",5677,"SNV","C","T","Heterozygous",8,25,32,1,4,6,0.4,36.38,10,30,8,7,-0.73,0.95,0.93,"no","complex","No",1,200,"XP_015840159.1:c.511G>A","XP_015840159.1:p.Asp171Asn","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2015,"NW_015451351.1",5713,"SNV","T","C","Heterozygous",20,31,64.52,1,9,15,0.38,36.8,24,35,16,16,-1.71,0.97,0.98,"no","C/T","No",1,66.45,"XP_015840159.1:c.475A>G","XP_015840159.1:p.Lys159Glu","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2016,"NW_015451351.1",5744,"SNV","A","T","Heterozygous",18,30,60,1,4,15,0.21,37.78,19,32,14,13,0,0.43,0.95,"no","A/T","No",1,82.08,"XP_015840159.1:c.444T>A","XP_015840159.1:p.Ser148Arg","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2017,"NW_015451351.1",5749,"SNV","G","A","Heterozygous",19,32,59.38,1,4,17,0.19,38.21,21,37,14,13,-0.04,0.53,0.91,"no","A/G","No",1,90.43,"XP_015840159.1:c.439C>T","XP_015840159.1:p.His147Tyr","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2018,"NW_015451351.1",5784,"SNV","A","G","Heterozygous",15,27,55.56,1,4,12,0.25,39.4,16,31,11,12,1.24,0.41,0.9,"no","A/G","No",1,90.42,"XP_015840159.1:c.404T>C","XP_015840159.1:p.Val135Ala","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2020,"NW_015451351.1","5820..5821","MNV","CA","TC","Heterozygous",7,20,35,1,4,5,0.44,38.79,9,23,7,6,0.06,0.14,1,"no","complex","No",1,200,"XP_015840159.1:c.367_368delTGinsGA","XP_015840159.1:p.Cys123Asp","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[2023,"NW_015451432.1",144772,"SNV","G","C","Heterozygous",17,28,60.71,1,9,8,0.47,38.06,17,29,14,15,0.68,0.87,1,"no","C/G","No",1,74.84,"XP_015840165.1:c.91G>C","XP_015840165.1:p.Glu31Gln","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2024,"NW_015451432.1",145007,"SNV","A","T","Heterozygous",10,21,47.62,1,5,5,0.5,37.5,10,21,6,5,-1.62,0.77,1,"no","A/T","No",1,81.56,"XP_015840165.1:c.326A>T","XP_015840165.1:p.Lys109Ile","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2025,"NW_015451432.1",145201,"SNV","T","G","Heterozygous",8,20,40,1,5,3,0.38,37.62,8,23,6,8,-0.54,0.74,1,"no","G/T","No",1,59.59,"XP_015840165.1:c.520T>G","XP_015840165.1:p.Tyr174Asp","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2026,"NW_015451432.1",145370,"SNV","G","C","Heterozygous",15,32,46.88,1,7,11,0.39,38.8,18,36,11,12,0.26,0.65,0.99,"no","C/G","No",1,114.84,"XP_015840165.1:c.689G>C","XP_015840165.1:p.Arg230Pro","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2027,"NW_015451432.1",145399,"SNV","A","G","Heterozygous",13,38,34.21,1,7,9,0.44,38.31,16,41,10,12,-1.09,0.95,1,"no","A/G","No",1,73.72,"XP_015840165.1:c.718A>G","XP_015840165.1:p.Lys240Glu","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2028,"NW_015451432.1",145502,"SNV","T","A","Heterozygous",18,28,64.29,1,12,8,0.4,38.89,20,30,14,13,0.67,0.81,1,"no","A/T","No",1,62.27,"XP_015840165.1:c.821T>A","XP_015840165.1:p.Phe274Tyr","LOC107399041",107399041,null,"107399041 [Gene Symbol: LOC107399041] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399041] [Gene Type: protein-coding]","LOC107399041"]
[2029,"NW_015451432.1",146543,"SNV","T","G","Heterozygous",13,27,48.15,1,5,10,0.33,39.38,15,33,6,8,-0.05,0.87,0.89,"no","G/T","No",1,103.42,"XP_015840166.1:c.178T>G","XP_015840166.1:p.Leu60Val","LOC103313249",103313249,null,"103313249 [Gene Symbol: LOC103313249] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103313249] [Gene Type: protein-coding]","LOC103313249"]
[2033,"NW_015451489.1",33715,"SNV","C","T","Heterozygous",12,20,60,1,1,12,0.08,37.67,13,23,3,3,-0.12,0.42,0.93,"no","C/T","No",1,60.2,"XP_008192735.1:c.476C>T","XP_008192735.1:p.Ala159Val","LOC103312837",103312837,null,"103312837 [Gene Symbol: LOC103312837] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312837] [Gene Type: protein-coding]","LOC103312837"]
[2034,"NW_015451514.1","1887..1894","Deletion","TTTTTCAA","-","Heterozygous",38,61,62.3,1,13,29,0.31,37.34,42,66,24,26,0.13,0.97,0.97,"no","complex","No",1,200,"XP_015840230.1:c.[844_851delTTGAAAAA]; XP_015840231.1:c.[790_797delTTGAAAAA]","XP_015840230.1:p.[Leu282fs]; XP_015840231.1:p.[Leu264fs]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2035,"NW_015451514.1",2045,"SNV","A","C","Heterozygous",29,46,63.04,1,16,17,0.48,37.41,33,53,21,22,1.58,0.73,1,"no","A/C","No",1,97.85,"XP_015840230.1:c.[693T>G]; XP_015840231.1:c.[639T>G]","XP_015840230.1:p.[Phe231Leu]; XP_015840231.1:p.[Phe213Leu]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2036,"NW_015451514.1",2070,"SNV","G","C","Heterozygous",24,38,63.16,1,12,14,0.46,36.75,26,44,19,18,0.15,0.96,1,"no","C/G","No",1,85.42,"XP_015840230.1:c.[668C>G]; XP_015840231.1:c.[614C>G]","XP_015840230.1:p.[Ser223Cys]; XP_015840231.1:p.[Ser205Cys]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2037,"NW_015451514.1",2290,"SNV","T","G","Heterozygous",14,31,45.16,1,7,7,0.5,37.29,14,32,8,8,-0.65,0.31,0.99,"no","G/T","No",1,105.63,"XP_015840231.1:c.[394A>C]; XP_015840230.1:c.[448A>C]","XP_015840231.1:p.[Thr132Pro]; XP_015840230.1:p.[Thr150Pro]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2040,"NW_015451514.1",3056,"SNV","G","T","Heterozygous",29,56,51.79,1,15,17,0.47,38.28,32,69,16,19,2.57,0.26,0.99,"no","G/T","No",1,200,"XP_015840230.1:c.[49C>A]; XP_015840231.1:c.[49C>A]","XP_015840230.1:p.[Arg17Ser]; XP_015840231.1:p.[Arg17Ser]","LOC103314473",103314473,null,"103314473 [Gene Symbol: LOC103314473] [Locus Tag: TcasGA2_TC034201] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314473] [Gene Type: protein-coding]","TcasGA2_TC034201; LOC103314473"]
[2041,"NW_015451575.1",736,"SNV","T","G","Homozygous",20,20,100,1,9,13,0.41,37.15,22,22,11,11,null,1,1,"no","G/G","No",1,80.09,"XP_015840239.1:c.98T>G","XP_015840239.1:p.Ile33Arg","LOC103313046",103313046,null,"103313046 [Gene Symbol: LOC103313046] [Locus Tag: TcasGA2_TC035008] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103313046] [Gene Type: protein-coding]","LOC103313046; TcasGA2_TC035008"]
[2042,"NW_015451597.1",5317,"Deletion","A","-","Homozygous",24,24,100,1,14,12,0.46,38.04,26,26,18,20,null,1,1,"no","-/-","No",1,102.75,"XP_015840241.1:c.1207delA","XP_015840241.1:p.Asn404fs","LOC107399075",107399075,null,"107399075 [Gene Symbol: LOC107399075] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399075] [Gene Type: protein-coding]","LOC107399075"]
[2043,"NW_015451657.1",28095,"SNV","T","A","Homozygous",24,24,100,1,16,10,0.38,38.17,26,26,11,17,null,1,1,"no","A/A","No",1,93.72,"XP_015840258.1:c.584T>A","XP_015840258.1:p.Ile195Asn","LOC107399091",107399091,null,"107399091 [Gene Symbol: LOC107399091] [Locus Tag: TcasGA2_TC033284] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399091] [Gene Type: protein-coding]","LOC107399091; TcasGA2_TC033284"]
[2047,"NW_015451687.1",88390,"SNV","T","C","Homozygous",41,46,89.13,1,14,30,0.32,36.78,44,49,21,20,null,0.99,0.99,"no","C/C","No",1,51.66,"XP_015840269.1:c.[223A>G]; XP_015840265.1:c.[2114+22552T>C]; XP_008197805.1:c.[1643+22552T>C]; XP_008197770.1:c.[2114+22552T>C]; XP_015840270.1:c.[164A>G]","XP_015840269.1:p.[Ile75Val]; XP_015840270.1:p.[Asn55Ser]","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[2050,"NW_015451687.1",256412,"SNV","A","G","Heterozygous",43,59,72.88,1,29,19,0.4,37.7,48,67,25,25,0.09,0.93,1,"no","A/G","No",1,52.22,"XP_008198284.1:c.[757T>C]; XP_008198234.1:c.[757T>C]","XP_008198284.1:p.[*253Arg]; XP_008198234.1:p.[*253Arg]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2052,"NW_015451687.1",256716,"SNV","G","A","Homozygous",52,52,100,1,14,46,0.23,38.29,60,60,30,29,null,1,1,"no","A/A","No",1,159.55,"XP_008198234.1:c.[500C>T]; XP_008198284.1:c.[500C>T]","XP_008198234.1:p.[Thr167Ile]; XP_008198284.1:p.[Thr167Ile]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2053,"NW_015451687.1",256733,"SNV","G","C","Homozygous",57,57,100,1,28,38,0.42,37.68,66,66,36,36,null,1,1,"no","C/C","No",1,200,"XP_008198234.1:c.[483C>G]; XP_008198284.1:c.[483C>G]","XP_008198234.1:p.[Asp161Glu]; XP_008198284.1:p.[Asp161Glu]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2055,"NW_015451687.1",257018,"Deletion","G","-","Heterozygous",21,45,46.67,1,9,12,0.43,38.1,21,49,12,16,0.66,0.42,0.96,"no","-/G","No",1,153.53,"XP_008198284.1:c.[198delC]; XP_008198234.1:c.[198delC]","XP_008198284.1:p.[Tyr66fs]; XP_008198234.1:p.[Tyr66fs]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[2057,"NW_015451687.1",258239,"SNV","T","G","Homozygous",22,22,100,1,12,11,0.48,37.18,23,23,10,12,null,1,1,"no","G/G","No",1,86.11,"XP_015840264.1:c.388A>C","XP_015840264.1:p.Ile130Leu","LOC107399100",107399100,null,"107399100 [Gene Symbol: LOC107399100] [Locus Tag: TcasGA2_TC010690] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399100] [Gene Type: protein-coding]","TcasGA2_TC010690; LOC107399100"]
[2058,"NW_015451687.1",258798,"SNV","C","T","Heterozygous",12,24,50,1,3,11,0.21,37.08,14,26,8,8,-0.35,0.71,0.98,"no","C/T","No",1,96.36,"XP_015840264.1:c.196G>A","XP_015840264.1:p.Glu66Lys","LOC107399100",107399100,null,"107399100 [Gene Symbol: LOC107399100] [Locus Tag: TcasGA2_TC010690] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399100] [Gene Type: protein-coding]","TcasGA2_TC010690; LOC107399100"]
[2062,"NW_015451694.1",19992,"SNV","A","T","Heterozygous",16,43,37.21,1,3,16,0.16,38.5,19,54,9,8,0.1,0.27,0.74,"no","A/T","No",1,97.09,"XP_015840273.1:c.626T>A","XP_015840273.1:p.Leu209Gln","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[2063,"NW_015451694.1",20032,"SNV","T","C","Homozygous",31,31,100,1,20,14,0.41,39.45,34,34,18,21,null,1,1,"no","C/C","No",1,113.22,"XP_015840273.1:c.586A>G","XP_015840273.1:p.Lys196Glu","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[2064,"NW_015451694.1",20155,"SNV","C","T","Heterozygous",10,23,43.48,1,6,4,0.4,38.8,10,23,7,6,0.65,0.78,0.98,"no","C/T","No",1,76.02,"XP_015840273.1:c.463G>A","XP_015840273.1:p.Glu155Lys","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[2065,"NW_015451694.1","20417..20418","MNV","TT","CC","Heterozygous",9,37,24.32,1,5,4,0.44,35.56,9,40,5,5,-4.27,0.01,1,"no","complex","No",1,200,"XP_015840273.1:c.200_201delAAinsGG","XP_015840273.1:p.Glu67Gly","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[2067,"NW_015451697.1","19692..19693","Deletion","CG","-","Heterozygous",7,31,22.58,1,1,6,0.14,35.29,7,36,3,4,-1.27,0.44,0.72,"no","complex","No",1,200,"XP_015840274.1:c.1284_1285delCG","XP_015840274.1:p.Asp428fs","LOC103312466",103312466,null,"103312466 [Gene Symbol: LOC103312466] [Locus Tag: TcasGA2_TC005193] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312466] [Gene Type: protein-coding]","LOC103312466; TcasGA2_TC005193"]
[2068,"NW_015451697.1",19704,"SNV","T","C","Heterozygous",10,26,38.46,1,2,9,0.18,37.3,11,29,6,7,-0.29,0.6,0.84,"no","C/T","No",1,69,"XP_015840274.1:c.1273A>G","XP_015840274.1:p.Asn425Asp","LOC103312466",103312466,null,"103312466 [Gene Symbol: LOC103312466] [Locus Tag: TcasGA2_TC005193] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312466] [Gene Type: protein-coding]","LOC103312466; TcasGA2_TC005193"]
[2069,"NW_015451702.1",29505,"SNV","C","T","Homozygous",27,27,100,1,22,5,0.19,38.26,27,27,11,17,null,1,1,"no","T/T","No",1,102.75,"XP_008197973.1:c.[471-14437C>T]; XP_015840282.1:c.[98+427C>T]; XP_968710.2:c.[67C>T]; XP_008197979.1:c.[44+8549C>T]","XP_968710.2:p.Pro23Ser","LOC657141",657141,null,"657141 [Gene Symbol: LOC657141] [Locus Tag: TcasGA2_TC031717] [Chromosome: Un] [Map Location: ] [Description: rho guanine nucleotide exchange factor 4] [Gene Type: protein-coding]","TcasGA2_TC031717; LOC657141"]
[2070,"NW_015451702.1",29515,"SNV","C","G","Homozygous",23,23,100,1,18,5,0.22,37.3,23,23,11,15,null,1,1,"no","G/G","No",1,89.12,"XP_015840282.1:c.[98+437C>G]; XP_008197973.1:c.[471-14427C>G]; XP_008197979.1:c.[44+8559C>G]; XP_968710.2:c.[77C>G]","XP_968710.2:p.Ala26Gly","LOC657141",657141,null,"657141 [Gene Symbol: LOC657141] [Locus Tag: TcasGA2_TC031717] [Chromosome: Un] [Map Location: ] [Description: rho guanine nucleotide exchange factor 4] [Gene Type: protein-coding]","TcasGA2_TC031717; LOC657141"]
[2071,"NW_015451702.1",61496,"SNV","A","T","Homozygous",20,20,100,1,18,2,0.1,38.2,20,20,9,13,null,1,1,"no","T/T","No",1,81.69,"XP_015840282.1:c.[2313A>T]; XP_008197979.1:c.[2259A>T]; XP_015840283.1:c.[2124A>T]; XP_015840284.1:c.[1782A>T]; XP_968710.2:c.[2346A>T]; XP_008197973.1:c.[2685A>T]","XP_015840282.1:p.[Glu771Asp]; XP_008197979.1:p.[Glu753Asp]; XP_015840283.1:p.[Glu708Asp]; XP_015840284.1:p.[Glu594Asp]; XP_968710.2:p.[Glu782Asp]; XP_008197973.1:p.[Glu895Asp]","LOC657141",657141,null,"657141 [Gene Symbol: LOC657141] [Locus Tag: TcasGA2_TC031717] [Chromosome: Un] [Map Location: ] [Description: rho guanine nucleotide exchange factor 4] [Gene Type: protein-coding]","TcasGA2_TC031717; LOC657141"]
[2072,"NW_015451702.1",67540,"SNV","T","G","Homozygous",22,22,100,1,19,4,0.17,38.32,23,23,9,19,null,1,1,"no","G/G","No",1,86.11,"XP_968788.2:c.3253A>C","XP_968788.2:p.Ile1085Leu","LOC657224",657224,null,"657224 [Gene Symbol: LOC657224] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: remodeling and spacing factor 1] [Gene Type: protein-coding]","LOC657224"]
[2073,"NW_015451702.1",169464,"SNV","A","C","Homozygous",20,20,100,1,16,4,0.2,37.1,20,20,13,11,null,1,1,"no","C/C","No",1,80.12,"XP_015840292.1:c.[2568A>C]; XP_015840295.1:c.[2568A>C]; XP_015840290.1:c.[2568A>C]; XP_015840289.1:c.[2568A>C]; XP_015840293.1:c.[2568A>C]; XP_015840291.1:c.[2568A>C]; XP_015840294.1:c.[2568A>C]; XP_015840287.1:c.[2568A>C]; XP_969667.1:c.[2568A>C]; XP_015840296.1:c.[2568A>C]; XP_015840288.1:c.[2568A>C]","XP_015840292.1:p.[Arg856Ser]; XP_015840295.1:p.[Arg856Ser]; XP_015840290.1:p.[Arg856Ser]; XP_015840289.1:p.[Arg856Ser]; XP_015840293.1:p.[Arg856Ser]; XP_015840291.1:p.[Arg856Ser]; XP_015840294.1:p.[Arg856Ser]; XP_015840287.1:p.[Arg856Ser]; XP_969667.1:p.[Arg856Ser]; XP_015840296.1:p.[Arg856Ser]; XP_015840288.1:p.[Arg856Ser]","LOC658165",658165,null,"658165 [Gene Symbol: LOC658165] [Locus Tag: TcasGA2_TC031720] [Chromosome: Un] [Map Location: ] [Description: protein unc-13 homolog B] [Gene Type: protein-coding]","TcasGA2_TC031720; LOC658165"]
[2074,"NW_015451702.1",216700,"SNV","A","T","Homozygous",27,27,100,1,11,18,0.38,37.67,29,29,14,18,null,1,1,"no","T/T","No",1,102.75,"XP_015840281.1:c.415A>T","XP_015840281.1:p.Thr139Ser","LOC107399113",107399113,null,"107399113 [Gene Symbol: LOC107399113] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399113] [Gene Type: protein-coding]","LOC107399113"]
[2075,"NW_015451723.1",3500,"SNV","A","G","Heterozygous",15,28,53.57,1,6,9,0.4,37.73,15,30,12,12,-2.05,0.22,0.92,"no","A/G","No",1,100.36,"XP_015840301.1:c.28A>G","XP_015840301.1:p.Ser10Gly","LOC107399117",107399117,null,"107399117 [Gene Symbol: LOC107399117] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399117] [Gene Type: protein-coding]","LOC107399117"]
[2077,"NW_015451723.1","4764..4765","MNV","AA","GG","Heterozygous",5,21,23.81,1,0,5,0,38.9,5,22,2,2,-0.92,0.19,0.58,"no","complex","No",1,200,"XP_008193733.1:c.39_40delAAinsGG","XP_008193733.1:p.Lys14Glu","LOC103313110",103313110,null,"103313110 [Gene Symbol: LOC103313110] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103313110] [Gene Type: protein-coding]","LOC103313110"]
[2078,"NW_015451723.1",5482,"SNV","A","G","Heterozygous",11,28,39.29,1,8,5,0.38,36.91,13,32,8,9,-0.8,0.35,0.62,"no","A/G","No",1,76.08,"XP_008193733.1:c.577A>G","XP_008193733.1:p.Lys193Glu","LOC103313110",103313110,null,"103313110 [Gene Symbol: LOC103313110] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103313110] [Gene Type: protein-coding]","LOC103313110"]
[2080,"NW_015451776.1","35226..35227","MNV","TG","CA","Homozygous",21,21,100,1,12,13,0.48,36.12,25,25,13,18,null,1,1,"no","CA/CA","No",1,200,"XP_015840310.1:c.984_985delTGinsCA","XP_015840310.1:p.Val329Ile","LOC658551",658551,null,"658551 [Gene Symbol: LOC658551] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: G patch domain and KOW motifs-containing protein] [Gene Type: protein-coding]","LOC658551"]
[2081,"NW_015451780.1",231416,"SNV","T","C","Heterozygous",8,23,34.78,1,6,2,0.25,38.5,8,25,3,5,1.61,0.59,1,"no","C/T","No",1,54.65,"XP_015840314.1:c.5T>C","XP_015840314.1:p.Ile2Thr","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2082,"NW_015451780.1",231428,"SNV","A","G","Heterozygous",10,22,45.45,1,7,5,0.42,36.7,12,27,7,7,1.09,0.88,1,"no","A/G","No",1,80.01,"XP_015840314.1:c.17A>G","XP_015840314.1:p.Lys6Arg","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2083,"NW_015451780.1",231454,"SNV","A","G","Heterozygous",10,29,34.48,1,7,6,0.46,37.5,13,33,8,7,-0.34,0.53,0.97,"no","A/G","No",1,60.49,"XP_015840314.1:c.43A>G","XP_015840314.1:p.Ile15Val","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2084,"NW_015451780.1","231483..231484","MNV","TC","CT","Heterozygous",11,32,34.38,1,7,7,0.5,39.5,14,36,10,11,0.48,0.98,0.96,"no","complex","No",1,200,"XP_015840314.1:c.72_73delTCinsCT","XP_015840314.1:p.Leu25Phe","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2085,"NW_015451780.1",231655,"SNV","A","G","Heterozygous",12,24,50,1,4,9,0.31,38,13,26,10,11,-1.3,0.93,1,"no","A/G","No",1,96.3,"XP_015840314.1:c.244A>G","XP_015840314.1:p.Ile82Val","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2086,"NW_015451780.1",231658,"SNV","C","T","Heterozygous",9,25,36,1,5,5,0.5,39.56,10,27,6,8,1.36,0.4,0.79,"no","C/T","No",1,57.76,"XP_015840314.1:c.247C>T","XP_015840314.1:p.His83Tyr","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2087,"NW_015451780.1",231661,"SNV","C","G","Heterozygous",12,25,48,1,4,9,0.31,39.25,13,27,10,11,-0.24,0.93,1,"no","C/G","No",1,95.88,"XP_015840314.1:c.250C>G","XP_015840314.1:p.Gln84Glu","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2088,"NW_015451780.1",231682,"SNV","G","A","Heterozygous",11,24,45.83,1,4,8,0.33,40.18,12,28,9,10,2.26,0.71,0.99,"no","A/G","No",1,86.08,"XP_015840314.1:c.271G>A","XP_015840314.1:p.Gly91Arg","LOC107399126",107399126,null,"107399126 [Gene Symbol: LOC107399126] [Locus Tag: TcasGA2_TC001840] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399126] [Gene Type: protein-coding]","TcasGA2_TC001840; LOC107399126"]
[2089,"NW_015451782.1",22432,"SNV","A","G","Heterozygous",18,32,56.25,1,13,8,0.38,38.39,21,38,14,14,0.63,0.99,1,"no","A/G","No",1,101.98,"XP_008194552.2:c.797T>C","XP_008194552.2:p.Val266Ala","LOC100142619",100142619,null,"100142619 [Gene Symbol: LOC100142619] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: probable RNA-directed DNA polymerase from transposon X-element] [Gene Type: protein-coding]","LOC100142619"]
[2090,"NW_015451788.1",4557,"SNV","G","A","Heterozygous",12,28,42.86,1,3,11,0.21,39.58,14,32,6,5,1.51,0.65,0.73,"no","A/G","No",1,87.67,"XP_008201200.1:c.67G>A","XP_008201200.1:p.Asp23Asn","LOC103315116",103315116,null,"103315116 [Gene Symbol: LOC103315116] [Locus Tag: TcasGA2_TC031671] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315116] [Gene Type: protein-coding]","TcasGA2_TC031671; LOC103315116"]
[2091,"NW_015451839.1",9295,"SNV","G","A","Heterozygous",11,27,40.74,1,8,3,0.27,36.82,11,27,5,7,-0.52,0.08,1,"no","A/G","No",1,77.83,"XP_015840339.1:c.559C>T","XP_015840339.1:p.His187Tyr","LOC107399147",107399147,null,"107399147 [Gene Symbol: LOC107399147] [Locus Tag: TcasGA2_TC031884] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399147] [Gene Type: protein-coding]","TcasGA2_TC031884; LOC107399147"]
[2094,"NW_015451872.1",11608,"SNV","T","C","Heterozygous",9,22,40.91,1,5,5,0.5,37.11,10,24,6,7,-1.84,0.7,0.98,"no","C/T","No",1,67.38,"XP_015840342.1:c.[892A>G]; XP_015840344.1:c.[892A>G]; XP_015840343.1:c.[892A>G]","XP_015840342.1:p.[Ile298Val]; XP_015840344.1:p.[Ile298Val]; XP_015840343.1:p.[Ile298Val]","LOC107399152",107399152,null,"107399152 [Gene Symbol: LOC107399152] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399152] [Gene Type: protein-coding]","LOC107399152"]
[2097,"NW_015451896.1",339,"SNV","G","A","Heterozygous",9,23,39.13,1,9,2,0.18,39.11,11,30,5,7,0.31,0.21,0.38,"no","A/G","No",1,63.39,"XP_015840351.1:c.502C>T","XP_015840351.1:p.Arg168Cys","LOC107399159",107399159,null,"107399159 [Gene Symbol: LOC107399159] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399159] [Gene Type: protein-coding]","LOC107399159"]
[2099,"NW_015451896.1","1858..1859","MNV","GG","AA","Heterozygous",13,22,59.09,1,6,9,0.4,38.96,15,24,12,13,0.68,0.84,0.72,"no","complex","No",1,200,"XP_015840350.1:c.495_496delGGinsAA","XP_015840350.1:p.Asp166Asn","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2100,"NW_015451896.1",1996,"SNV","T","G","Heterozygous",12,23,52.17,1,0,12,0,38.67,12,23,7,5,0.28,0.51,0.39,"no","G/T","No",1,85.37,"XP_015840350.1:c.633T>G","XP_015840350.1:p.Asn211Lys","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2102,"NW_015451896.1",2307,"SNV","C","G","Heterozygous",14,25,56,1,4,11,0.27,38.5,15,26,9,9,-0.33,0.97,0.89,"no","C/G","No",1,83.25,"XP_015840350.1:c.944C>G","XP_015840350.1:p.Thr315Ser","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2103,"NW_015451896.1",2312,"SNV","G","A","Heterozygous",11,21,52.38,1,4,8,0.33,39.91,12,22,8,8,2.18,0.59,0.98,"no","A/G","No",1,82.51,"XP_015840350.1:c.949G>A","XP_015840350.1:p.Glu317Lys","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2104,"NW_015451896.1","2319^2320","Insertion","-","AA","Heterozygous",11,22,50,1,6,7,0.46,39.68,13,24,9,10,3.03,0.82,1,"no","complex","No",1,200,"XP_015840350.1:c.956_957insAA","XP_015840350.1:p.Thr320fs","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2105,"NW_015451896.1",2519,"SNV","A","G","Heterozygous",11,29,37.93,1,8,5,0.38,38.27,13,31,8,10,-0.16,0.49,1,"no","A/G","No",1,73.16,"XP_015840350.1:c.1156A>G","XP_015840350.1:p.Lys386Glu","LOC107399158",107399158,null,"107399158 [Gene Symbol: LOC107399158] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: RNA-directed DNA polymerase from mobile element jockey-like] [Gene Type: protein-coding]","LOC107399158"]
[2106,"NW_015451896.1",2768,"SNV","C","T","Heterozygous",11,20,55,1,9,7,0.44,35.91,16,25,7,7,-1.22,0.18,0.98,"no","C/T","No",1,72.91,"XP_015840345.1:c.19C>T","XP_015840345.1:p.Pro7Ser","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[2107,"NW_015451896.1",2975,"SNV","A","G","Heterozygous",11,20,55,1,7,4,0.36,36.91,11,20,7,7,0.76,0.9,1,"no","A/G","No",1,71.89,"XP_015840345.1:c.226A>G","XP_015840345.1:p.Arg76Gly","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[2108,"NW_015451896.1",4138,"SNV","A","C","Heterozygous",11,32,34.38,1,4,7,0.36,38.27,11,32,7,10,1.55,0.28,1,"no","A/C","No",1,64.66,"XP_015840345.1:c.1306A>C","XP_015840345.1:p.Asn436His","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[2109,"NW_015451896.1",4168,"SNV","G","A","Heterozygous",13,34,38.24,1,6,9,0.4,38.46,15,41,8,11,1.22,0.92,0.99,"no","A/G","No",1,83.78,"XP_015840345.1:c.1336G>A","XP_015840345.1:p.Glu446Lys","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[2110,"NW_015451896.1",4214,"SNV","T","A","Heterozygous",10,29,34.48,1,5,5,0.5,37.7,10,30,6,7,-0.55,0.03,0.53,"no","A/T","No",1,59.38,"XP_015840345.1:c.1382T>A","XP_015840345.1:p.Phe461Tyr","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[2112,"NW_015451896.1",36366,"SNV","G","A","Heterozygous",14,36,38.89,1,8,6,0.43,38.5,14,39,10,12,1.93,0.37,0.92,"no","A/G","No",1,90.81,"XP_015840349.1:c.[70G>A]; XP_015840348.1:c.[94G>A]","XP_015840349.1:p.[Asp24Asn]; XP_015840348.1:p.[Asp32Asn]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2113,"NW_015451896.1",36505,"SNV","A","G","Homozygous",29,29,100,1,17,15,0.47,37.76,32,32,14,17,null,1,1,"no","G/G","No",1,107.17,"XP_015840348.1:c.[233A>G]; XP_015840349.1:c.[209A>G]","XP_015840348.1:p.[Glu78Gly]; XP_015840349.1:p.[Glu70Gly]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2115,"NW_015451896.1",36544,"SNV","A","G","Homozygous",41,41,100,1,33,16,0.33,36.61,49,49,25,23,null,1,1,"no","G/G","No",1,143.21,"XP_015840349.1:c.[248A>G]; XP_015840348.1:c.[272A>G]","XP_015840349.1:p.[His83Arg]; XP_015840348.1:p.[His91Arg]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2117,"NW_015451896.1","36704^36705","Insertion","-","C","Heterozygous",15,27,55.56,1,6,12,0.33,37.33,18,33,9,10,-0.39,0.83,1,"no","-/C","No",1,79.92,"XP_015840349.1:c.[408_409insC]; XP_015840348.1:c.[432_433insC]","XP_015840349.1:p.[Arg137fs]; XP_015840348.1:p.[Arg145fs]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2118,"NW_015451896.1",36871,"SNV","G","A","Heterozygous",12,36,33.33,1,8,6,0.43,38.42,14,44,6,11,1.81,0.39,0.98,"no","A/G","No",1,65.46,"XP_015840349.1:c.[575G>A]; XP_015840348.1:c.[599G>A]","XP_015840349.1:p.[Gly192Glu]; XP_015840348.1:p.[Gly200Glu]","LOC107399157",107399157,null,"107399157 [Gene Symbol: LOC107399157] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399157] [Gene Type: protein-coding]","LOC107399157"]
[2119,"NW_015451896.1","61007..61008","MNV","CA","AC","Heterozygous",6,25,24,1,6,1,0.14,37.83,7,26,5,5,-0.72,0.46,0.61,"no","complex","No",1,200,"XP_015840346.1:c.125_126delCAinsAC","XP_015840346.1:p.Pro42His","LOC107399155",107399155,null,"107399155 [Gene Symbol: LOC107399155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399155] [Gene Type: protein-coding]","LOC107399155"]
[2121,"NW_015451896.1",71446,"SNV","A","T","Heterozygous",9,25,36,1,0,9,0,36.11,9,25,4,6,0.51,0.11,0.28,"no","A/T","No",1,57.89,"XP_015840346.1:c.1049A>T","XP_015840346.1:p.Glu350Val","LOC107399155",107399155,null,"107399155 [Gene Symbol: LOC107399155] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399155] [Gene Type: protein-coding]","LOC107399155"]
[2122,"NW_015451916.1",2575,"SNV","C","T","Homozygous",187,187,100,1,112,97,0.46,37.98,209,209,80,86,null,1,1,"no","T/T","No",1,200,"XP_015840352.1:c.470C>T","XP_015840352.1:p.Pro157Leu","LOC107399160",107399160,null,"107399160 [Gene Symbol: LOC107399160] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399160] [Gene Type: protein-coding]","LOC107399160"]
[2124,"NW_015451918.1",472,"SNV","A","G","Homozygous",20,21,95.24,1,18,2,0.1,37.75,20,22,9,13,null,0.94,0.97,"no","G/G","No",1,54.59,"XP_008198322.1:c.311A>G","XP_008198322.1:p.Tyr104Cys","LOC654897",654897,null,"654897 [Gene Symbol: LOC654897] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: eukaryotic translation initiation factor 3 subunit D] [Gene Type: protein-coding]","LOC654897"]
[2125,"NW_015451918.1",477,"SNV","C","T","Homozygous",19,20,95,1,17,2,0.11,37.68,19,21,9,12,null,0.94,0.98,"no","T/T","No",1,50.19,"XP_008198322.1:c.316C>T","XP_008198322.1:p.Arg106Trp","LOC654897",654897,null,"654897 [Gene Symbol: LOC654897] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: eukaryotic translation initiation factor 3 subunit D] [Gene Type: protein-coding]","LOC654897"]
[2126,"NW_015451937.1",718757,"SNV","G","A","Heterozygous",8,20,40,1,5,4,0.44,37.88,9,23,6,6,-0.58,0.92,0.93,"no","A/G","No",1,59.17,"XP_015840357.1:c.207G>A","XP_015840357.1:p.Trp69*","LOC107399165",107399165,null,"107399165 [Gene Symbol: LOC107399165] [Locus Tag: TcasGA2_TC002310] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399165] [Gene Type: protein-coding]","LOC107399165; TcasGA2_TC002310"]
[2129,"NW_015451977.1",1234,"SNV","G","A","Heterozygous",12,24,50,1,6,9,0.4,36.08,15,28,8,8,-1.04,0.85,0.97,"no","A/G","No",1,96.37,"XP_008197342.1:c.[97G>A]; XP_015840400.1:c.[97G>A]; XP_015840401.1:c.[97G>A]","XP_008197342.1:p.[Asp33Asn]; XP_015840400.1:p.[Asp33Asn]; XP_015840401.1:p.[Asp33Asn]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2130,"NW_015451977.1",1487,"SNV","G","C","Heterozygous",14,30,46.67,1,3,11,0.21,35.29,14,34,8,8,-1.83,0.95,0.6,"no","C/G","No",1,107.58,"XP_015840400.1:c.[350G>C]; XP_008197342.1:c.[350G>C]; XP_015840401.1:c.[350G>C]","XP_015840400.1:p.[Gly117Ala]; XP_008197342.1:p.[Gly117Ala]; XP_015840401.1:p.[Gly117Ala]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2131,"NW_015451977.1",1778,"Deletion","G","-","Homozygous",49,49,100,1,33,20,0.38,35.73,53,53,31,30,null,1,1,"no","-/-","No",1,200,"XP_015840401.1:c.[641delG]; XP_008197342.1:c.[641delG]; XP_015840400.1:c.[641delG]","XP_015840401.1:p.[Glu215fs]; XP_008197342.1:p.[Glu215fs]; XP_015840400.1:p.[Glu215fs]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2132,"NW_015451977.1","1788..1789","MNV","GA","AG","Homozygous",36,42,85.71,1,21,18,0.46,35.84,39,45,29,26,1.98,1,1,"no","AG/AG","No",1,200,"XP_008197342.1:c.[651_652delGAinsAG]; XP_015840401.1:c.[651_652delGAinsAG]; XP_015840400.1:c.[651_652delGAinsAG]","XP_008197342.1:p.[Thr218Ala]; XP_015840401.1:p.[Thr218Ala]; XP_015840400.1:p.[Thr218Ala]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2134,"NW_015451977.1",2015,"SNV","C","T","Heterozygous",18,30,60,1,6,12,0.33,39.11,18,33,10,11,0.83,0.55,1,"no","C/T","No",1,83.41,"XP_008197342.1:c.[747+131C>T]; XP_015840401.1:c.[878C>T]; XP_015840400.1:c.[878C>T]","XP_015840401.1:p.[Pro293Leu]; XP_015840400.1:p.[Pro293Leu]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2136,"NW_015451977.1",2194,"SNV","C","T","Heterozygous",12,33,36.36,1,4,9,0.31,38.25,13,40,7,8,-0.82,0.79,0.74,"no","C/T","No",1,73.53,"XP_015840400.1:c.[1057C>T]; XP_008197342.1:c.[747+310C>T]; XP_015840401.1:c.[940-13C>T]","XP_015840400.1:p.Leu353Phe","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2138,"NW_015451977.1",2952,"SNV","A","T","Heterozygous",13,21,61.9,1,4,9,0.31,36.23,13,22,7,8,-2.1,0.66,0.56,"no","A/T","No",1,56.13,"XP_008197342.1:c.[748-741A>T]; XP_015840400.1:c.[1815A>T]","XP_015840400.1:p.Lys605Asn","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[2141,"NW_015451987.1",2176,"SNV","G","A","Heterozygous",18,43,41.86,1,16,6,0.27,37.78,22,51,10,14,-0.64,0.33,0.4,"no","A/G","No",1,122.19,"XP_015840403.1:c.295G>A","XP_015840403.1:p.Val99Ile","LOC103314505",103314505,null,"103314505 [Gene Symbol: LOC103314505] [Locus Tag: TcasGA2_TC030940] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314505] [Gene Type: protein-coding]","LOC103314505; TcasGA2_TC030940"]
[2142,"NW_015452063.1",949,"SNV","T","A","Heterozygous",10,20,50,1,4,6,0.4,39.7,10,24,7,6,2.83,0.45,0.77,"no","A/T","No",1,74.39,"XP_015840424.1:c.61T>A","XP_015840424.1:p.Leu21Met","LOC107399182",107399182,null,"107399182 [Gene Symbol: LOC107399182] [Locus Tag: TcasGA2_TC030323] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399182] [Gene Type: protein-coding]","LOC107399182; TcasGA2_TC030323"]
[2143,"NW_015452075.1",5651,"SNV","T","A","Homozygous",27,27,100,1,11,19,0.37,39.22,30,30,18,17,null,1,1,"no","A/A","No",1,102.75,"XP_008191547.1:c.320A>T","XP_008191547.1:p.Gln107Leu","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[2144,"NW_015452075.1",5667,"SNV","G","T","Heterozygous",10,23,43.48,1,4,6,0.4,38.6,10,23,6,7,1.3,0.5,1,"no","G/T","No",1,72.71,"XP_008191547.1:c.304C>A","XP_008191547.1:p.Pro102Thr","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[2145,"NW_015452075.1",5782,"SNV","A","C","Homozygous",39,39,100,1,30,12,0.29,38.9,42,42,21,25,null,1,1,"no","C/C","No",1,137.32,"XP_008191547.1:c.189T>G","XP_008191547.1:p.Cys63Trp","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[2147,"NW_015452075.1",5948,"SNV","A","G","Homozygous",29,29,100,1,14,17,0.45,38.24,31,31,17,20,null,1,1,"no","G/G","No",1,107.17,"XP_008191547.1:c.23T>C","XP_008191547.1:p.Ile8Thr","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[2148,"NW_015452075.1",9888,"SNV","T","C","Heterozygous",10,27,37.04,1,8,2,0.2,39,10,28,6,7,0.33,0.3,0.38,"no","C/T","No",1,66.23,"XP_015840425.1:c.404A>G","XP_015840425.1:p.Asp135Gly","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[2149,"NW_015452075.1",9901,"SNV","T","C","Heterozygous",10,26,38.46,1,7,3,0.3,39.4,10,27,6,7,0.26,0.3,0.65,"no","C/T","No",1,69.03,"XP_015840425.1:c.391A>G","XP_015840425.1:p.Asn131Asp","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[2150,"NW_015452075.1",9942,"SNV","C","T","Heterozygous",15,25,60,1,11,6,0.35,37.47,17,31,10,9,-2.25,0.79,0.86,"no","C/T","No",1,71.79,"XP_015840425.1:c.350G>A","XP_015840425.1:p.Arg117Lys","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[2151,"NW_015452075.1","9954..9955","MNV","AC","CT","Heterozygous",12,20,60,1,10,4,0.29,37.54,14,23,9,8,-0.38,0.91,0.68,"no","complex","No",1,200,"XP_015840425.1:c.337_338delGTinsAG","XP_015840425.1:p.Val113Arg","LOC107399183",107399183,null,"107399183 [Gene Symbol: LOC107399183] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399183] [Gene Type: protein-coding]","LOC107399183"]
[2152,"NW_015452103.1",781,"SNV","C","T","Homozygous",74,79,93.67,1,49,30,0.38,37.95,79,84,36,47,null,0.99,1,"no","T/T","No",1,142.47,"XP_008198969.1:c.223C>T","XP_008198969.1:p.Arg75Cys","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2153,"NW_015452103.1",820,"SNV","A","G","Homozygous",84,84,100,1,67,26,0.28,38.11,93,93,40,50,null,1,1,"no","G/G","No",1,156.54,"XP_008198969.1:c.262A>G","XP_008198969.1:p.Ile88Val","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2154,"NW_015452103.1",886,"SNV","A","G","Homozygous",77,77,100,1,42,40,0.49,36.86,82,82,33,42,null,1,1,"no","G/G","No",1,200,"XP_008198969.1:c.328A>G","XP_008198969.1:p.Ser110Gly","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2155,"NW_015452103.1",905,"SNV","T","C","Homozygous",72,72,100,1,37,40,0.48,38.08,77,77,31,39,null,1,1,"no","C/C","No",1,200,"XP_008198969.1:c.347T>C","XP_008198969.1:p.Leu116Pro","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2156,"NW_015452103.1",947,"SNV","T","C","Homozygous",64,64,100,1,37,36,0.49,37.09,73,73,30,37,null,1,1,"no","C/C","No",1,200,"XP_008198969.1:c.389T>C","XP_008198969.1:p.Met130Thr","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2158,"NW_015452103.1",1203,"Deletion","G","-","Homozygous",63,63,100,1,36,40,0.47,36,76,76,39,41,null,1,1,"no","-/-","No",1,200,"XP_008198969.1:c.645delG","XP_008198969.1:p.Ala216fs","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2159,"NW_015452103.1",1238,"SNV","T","C","Homozygous",48,53,90.57,1,22,35,0.39,36.54,57,63,31,31,null,1,1,"no","C/C","No",1,65.62,"XP_008198969.1:c.680T>C","XP_008198969.1:p.Leu227Pro","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2160,"NW_015452103.1",1250,"SNV","A","G","Homozygous",50,57,87.72,1,19,39,0.33,37.64,58,66,30,32,null,0.99,1,"no","G/G","No",1,56.65,"XP_008198969.1:c.692A>G","XP_008198969.1:p.Asn231Ser","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2162,"NW_015452103.1",1273,"SNV","T","A","Homozygous",46,46,100,1,11,41,0.21,37.52,52,52,26,26,null,1,1,"no","A/A","No",1,159.55,"XP_008198969.1:c.715T>A","XP_008198969.1:p.*239Lys","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[2164,"NW_015452119.1",2798,"SNV","T","G","Homozygous",27,27,100,1,11,16,0.41,39,27,27,17,13,null,1,1,"no","G/G","No",1,101.16,"XP_008191977.1:c.[295A>C]; XP_008192016.1:c.[277A>C]","XP_008191977.1:p.[Lys99Gln]; XP_008192016.1:p.[Lys93Gln]","LOC659059",659059,null,"659059 [Gene Symbol: LOC659059] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: probable tyrosyl-DNA phosphodiesterase] [Gene Type: protein-coding]","LOC659059"]
[2165,"NW_015452119.1","2801..2802","MNV","TG","CA","Homozygous",24,24,100,1,11,13,0.46,39.46,24,24,16,11,null,1,1,"no","CA/CA","No",1,200,"XP_008192016.1:c.[273_274delCAinsTG]; XP_008191977.1:c.[291_292delCAinsTG]","XP_008192016.1:p.[Thr92Ala]; XP_008191977.1:p.[Thr98Ala]","LOC659059",659059,null,"659059 [Gene Symbol: LOC659059] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: probable tyrosyl-DNA phosphodiesterase] [Gene Type: protein-coding]","LOC659059"]
[2166,"NW_015452119.1",4122,"SNV","T","G","Homozygous",23,23,100,1,14,11,0.44,38.22,25,25,12,16,null,1,1,"no","G/G","No",1,89.12,"XP_970564.1:c.531A>C","XP_970564.1:p.Glu177Asp","LOC659139",659139,null,"659139 [Gene Symbol: LOC659139] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: E3 ubiquitin-protein ligase RING1] [Gene Type: protein-coding]","LOC659139"]
[2167,"NW_015452142.1","23828..23829","Replacement","CA","T","Heterozygous",9,20,45,1,3,6,0.33,38.19,9,23,6,6,-1.12,0.79,1,"no","complex","No",1,200,"XP_008200958.2:c.720_721delTGinsA","XP_008200958.2:p.Tyr240fs","LOC103315049",103315049,null,"103315049 [Gene Symbol: LOC103315049] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative nuclease HARBI1] [Gene Type: protein-coding]","LOC103315049"]
[2168,"NW_015452142.1","23833..23836","Deletion","AATA","-","Heterozygous",9,20,45,1,3,6,0.33,37.33,9,21,6,6,-2.29,0.66,0.94,"no","complex","No",1,200,"XP_008200958.2:c.713_716delTATT","XP_008200958.2:p.Val238fs","LOC103315049",103315049,null,"103315049 [Gene Symbol: LOC103315049] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative nuclease HARBI1] [Gene Type: protein-coding]","LOC103315049"]
[2169,"NW_015452142.1",26748,"SNV","G","C","Heterozygous",9,25,36,1,4,5,0.44,37.67,9,27,5,6,-0.85,0.74,1,"no","C/G","No",1,57.71,"XP_015840428.1:c.420C>G","XP_015840428.1:p.Asn140Lys","LOC107399187",107399187,null,"107399187 [Gene Symbol: LOC107399187] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399187] [Gene Type: protein-coding]","LOC107399187"]
[2173,"NW_015452165.1",17702,"SNV","A","G","Heterozygous",46,75,61.33,1,38,24,0.39,39.07,62,95,31,29,-1.97,0.98,0.99,"no","A/G","No",1,200,"XP_015840431.1:c.247A>G","XP_015840431.1:p.Lys83Glu","LOC107399193",107399193,null,"107399193 [Gene Symbol: LOC107399193] [Locus Tag: TcasGA2_TC031256] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399193] [Gene Type: protein-coding]","TcasGA2_TC031256; LOC107399193"]
[2174,"NW_015452170.1",2348,"SNV","A","G","Heterozygous",10,29,34.48,1,9,4,0.31,37.8,13,38,6,9,-0.53,0.12,0.83,"no","A/G","No",1,60.45,"XP_008192781.1:c.116A>G","XP_008192781.1:p.Gln39Arg","LOC103312146",103312146,null,"103312146 [Gene Symbol: LOC103312146] [Locus Tag: TcasGA2_TC035044] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312146] [Gene Type: protein-coding]","TcasGA2_TC035044; LOC103312146"]
[2175,"NW_015452170.1",2352,"SNV","C","A","Heterozygous",10,31,32.26,1,9,4,0.31,38.4,13,40,6,9,0.42,0.5,0.57,"no","A/C","No",1,50.23,"XP_008192781.1:c.120C>A","XP_008192781.1:p.Ser40Arg","LOC103312146",103312146,null,"103312146 [Gene Symbol: LOC103312146] [Locus Tag: TcasGA2_TC035044] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312146] [Gene Type: protein-coding]","TcasGA2_TC035044; LOC103312146"]
[2176,"NW_015452170.1",2672,"SNV","C","T","Heterozygous",10,23,43.48,1,5,8,0.38,38.6,13,26,8,8,0.71,0.68,1,"no","C/T","No",1,76.01,"XP_008192781.1:c.440C>T","XP_008192781.1:p.Ser147Leu","LOC103312146",103312146,null,"103312146 [Gene Symbol: LOC103312146] [Locus Tag: TcasGA2_TC035044] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312146] [Gene Type: protein-coding]","TcasGA2_TC035044; LOC103312146"]
[2178,"NW_015452199.1",1558,"SNV","G","A","Heterozygous",10,32,31.25,1,10,4,0.29,38.9,14,38,8,6,-0.65,0.64,1,"no","A/G","No",1,51.11,"XP_015840435.1:c.176G>A","XP_015840435.1:p.Arg59His","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[2180,"NW_015452199.1",2097,"SNV","G","A","Heterozygous",11,28,39.29,1,1,11,0.08,40.18,12,29,7,6,1.15,0.21,0.34,"no","A/G","No",1,74.94,"XP_015840435.1:c.715G>A","XP_015840435.1:p.Glu239Lys","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[2182,"NW_015452258.1",8743,"SNV","C","T","Heterozygous",13,38,34.21,1,13,0,0,39.46,13,42,5,9,1.98,0.05,0.44,"no","C/T","No",1,75.19,"XP_015840445.1:c.595G>A","XP_015840445.1:p.Val199Ile","LOC107399200",107399200,null,"107399200 [Gene Symbol: LOC107399200] [Locus Tag: TcasGA2_TC006958] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399200] [Gene Type: protein-coding]","TcasGA2_TC006958; LOC107399200"]
[2184,"NW_015452258.1",8809,"SNV","C","G","Heterozygous",16,53,30.19,1,5,11,0.31,38.75,16,62,7,12,-0.21,0.9,0.83,"no","C/G","No",1,69.17,"XP_015840445.1:c.529G>C","XP_015840445.1:p.Asp177His","LOC107399200",107399200,null,"107399200 [Gene Symbol: LOC107399200] [Locus Tag: TcasGA2_TC006958] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399200] [Gene Type: protein-coding]","TcasGA2_TC006958; LOC107399200"]
[2185,"NW_015452265.1",8654,"SNV","C","T","Heterozygous",9,21,42.86,1,5,4,0.44,38.44,9,21,7,6,1.42,0.38,0.67,"no","C/T","No",1,68.83,"XP_015840446.1:c.2126C>T","XP_015840446.1:p.Thr709Met","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2186,"NW_015452265.1","8679..8680","MNV","TG","CA","Heterozygous",8,21,38.1,1,3,5,0.38,37.75,8,21,6,5,-1.2,0.9,0.96,"no","complex","No",1,200,"XP_015840446.1:c.2151_2152delTGinsCA","XP_015840446.1:p.Val718Ile","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2188,"NW_015452265.1",9227,"SNV","G","A","Homozygous",43,43,100,1,31,22,0.42,38.07,53,53,30,31,null,1,1,"no","A/A","No",1,149.55,"XP_015840446.1:c.2642G>A","XP_015840446.1:p.Cys881Tyr","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2189,"NW_015452265.1",9410,"SNV","C","T","Homozygous",20,20,100,1,12,10,0.45,37.5,22,22,12,15,null,1,1,"no","T/T","No",1,81.7,"XP_015840446.1:c.2825C>T","XP_015840446.1:p.Thr942Ile","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2190,"NW_015452265.1",9493,"SNV","A","C","Homozygous",26,26,100,1,13,20,0.39,38.46,33,33,18,20,null,1,1,"no","C/C","No",1,98.17,"XP_015840446.1:c.2908A>C","XP_015840446.1:p.Ile970Leu","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2191,"NW_015452265.1",9527,"SNV","A","G","Homozygous",26,26,100,1,12,17,0.41,38.85,29,29,19,21,null,1,1,"no","G/G","No",1,98.15,"XP_015840446.1:c.2942A>G","XP_015840446.1:p.Asp981Gly","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[2193,"NW_015452276.1",21074,"SNV","A","G","Homozygous",23,23,100,1,13,14,0.48,36.57,27,27,10,14,null,1,1,"no","G/G","No",1,89.11,"XP_008200193.1:c.236T>C","XP_008200193.1:p.Phe79Ser","LOC656477",656477,null,"656477 [Gene Symbol: LOC656477] [Locus Tag: TcasGA2_TC031122] [Chromosome: Un] [Map Location: ] [Description: puromycin-sensitive aminopeptidase-like protein] [Gene Type: protein-coding]","LOC656477; TcasGA2_TC031122"]
[2194,"NW_015452276.1",79152,"SNV","A","G","Homozygous",23,23,100,1,12,14,0.46,35.65,26,26,9,14,null,1,1,"no","G/G","No",1,89.11,"XP_968717.1:c.101T>C","XP_968717.1:p.Leu34Pro","LOC657148",657148,null,"657148 [Gene Symbol: LOC657148] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: sodium-dependent serotonin transporter] [Gene Type: protein-coding]","LOC657148"]
[2196,"NW_015452276.1",123329,"SNV","G","A","Homozygous",20,20,100,1,12,10,0.45,36.5,22,22,10,12,null,1,1,"no","A/A","No",1,81.7,"XP_969008.2:c.7603G>A","XP_969008.2:p.Val2535Ile","LOC657455",657455,null,"657455 [Gene Symbol: LOC657455] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: small subunit processome component 20 homolog] [Gene Type: protein-coding]","LOC657455"]
[2198,"NW_015452276.1",199593,"SNV","C","T","Heterozygous",10,20,50,1,4,9,0.31,39.3,13,25,6,5,0.6,0.54,0.76,"no","C/T","No",1,81.97,"XP_969156.2:c.728C>T","XP_969156.2:p.Ala243Val","LOC657612",657612,null,"657612 [Gene Symbol: LOC657612] [Locus Tag: TcasGA2_TC031757] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC657612] [Gene Type: protein-coding]","TcasGA2_TC031757; LOC657612"]
[2199,"NW_015452276.1",203149,"SNV","A","G","Heterozygous",17,28,60.71,1,11,9,0.45,37.12,20,31,9,11,1.36,0.78,0.99,"no","A/G","No",1,75.01,"XP_015840450.1:c.3436T>C","XP_015840450.1:p.Phe1146Leu","LOC100142253",100142253,null,"100142253 [Gene Symbol: LOC100142253] [Locus Tag: TcasGA2_TC002339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142253] [Gene Type: protein-coding]","TcasGA2_TC002339; LOC100142253"]
[2201,"NW_015452276.1",206600,"SNV","C","T","Heterozygous",20,40,50,1,9,16,0.36,37.4,25,45,10,12,0.65,0.96,0.99,"no","C/T","No",1,153.53,"XP_015840450.1:c.2041G>A","XP_015840450.1:p.Asp681Asn","LOC100142253",100142253,null,"100142253 [Gene Symbol: LOC100142253] [Locus Tag: TcasGA2_TC002339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142253] [Gene Type: protein-coding]","TcasGA2_TC002339; LOC100142253"]
[2202,"NW_015452276.1",208260,"SNV","A","G","Homozygous",22,22,100,1,14,13,0.48,37.82,27,27,17,18,null,1,1,"no","G/G","No",1,86.1,"XP_015840450.1:c.1094T>C","XP_015840450.1:p.Val365Ala","LOC100142253, LOC657929","100142253 , 657929",null,"100142253 [Gene Symbol: LOC100142253] [Locus Tag: TcasGA2_TC002339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142253] [Gene Type: protein-coding] || 657929 [Gene Symbol: LOC657929] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: xylosyltransferase oxt] [Gene Type: protein-coding]","TcasGA2_TC002339; LOC100142253 || LOC657929"]
[2205,"NC_003081.2",686,"SNV","G","A","Homozygous",1872,1874,99.89,1,1010,1136,0.47,39.49,2146,2148,186,166,null,1,1,"no","A/A","No",1,200,"NP_203156.1:c.484G>A","NP_203156.1:p.Gly162Arg","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[2206,"NC_003081.2",807,"SNV","G","C","Homozygous",1828,1829,99.95,1,1015,1068,0.49,39.06,2083,2084,187,156,null,1,1,"no","C/C","No",1,200,"NP_203156.1:c.605G>C","NP_203156.1:p.*202Ser","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[2207,"NC_003081.2",925,"SNV","G","C","Homozygous",1922,1922,100,1,1182,1008,0.46,38.89,2190,2190,185,168,null,1,1,"no","C/C","No",1,200,"NP_203156.1:c.723G>C","NP_203156.1:p.Leu241Phe","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[2208,"NC_003081.2",2381,"SNV","G","C","Homozygous",2275,2277,99.91,1,1277,1300,0.5,39.07,2577,2579,186,168,null,1,1,"no","C/C","No",1,200,"NP_258414.1:c.987G>C","NP_258414.1:p.Gln329His","COX1",803829,null,"803829 [Gene Symbol: COX1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome c oxidase subunit I] [Gene Type: protein-coding]","COX1"]
[2209,"NC_003081.2","3997^3998","Insertion","-","AAC","Homozygous",1864,1871,99.63,1,1011,1099,0.48,39.02,2110,2119,185,170,1.81,1,1,"no","AAC/AAC","No",1,200,"NP_203158.1:c.134_135insAAC","NP_203158.1:p.Thr46_Ile47insThr","ATP8",803827,null,"803827 [Gene Symbol: ATP8] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: ATP synthase F0 subunit 8] [Gene Type: protein-coding]","ATP8"]
[2210,"NC_003081.2",4930,"SNV","A","G","Homozygous",2148,2149,99.95,1,1124,1290,0.47,38.73,2414,2416,183,165,null,1,1,"no","G/G","No",1,200,"NP_203160.2:c.247A>G","NP_203160.2:p.Ile83Val","COX3",803825,null,"803825 [Gene Symbol: COX3] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome c oxidase subunit III] [Gene Type: protein-coding]","COX3"]
[2211,"NC_003081.2","5591^5592","Insertion","-","T","Homozygous",1916,1917,99.95,1,1136,1028,0.48,38.16,2164,2165,182,162,null,1,1,"no","T/T","No",1,200,"NP_203161.1:c.65_66insT","NP_203161.1:p.*22fs","ND3",803821,null,"803821 [Gene Symbol: ND3] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 3] [Gene Type: protein-coding]","ND3"]
[2212,"NC_003081.2",6515,"SNV","C","T","Homozygous",1890,1890,100,1,1058,1067,0.5,38.74,2125,2125,182,171,null,1,1,"no","T/T","No",1,200,"NP_203162.1:c.1462G>A","NP_203162.1:p.Gly488Arg","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[2213,"NC_003081.2",6956,"SNV","T","A","Homozygous",2005,2005,100,1,1123,1139,0.5,38.61,2262,2262,186,165,null,1,1,"no","A/A","No",1,200,"NP_203162.1:c.1021A>T","NP_203162.1:p.Asn341Tyr","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[2214,"NC_003081.2",7444,"SNV","G","A","Homozygous",2033,2034,99.95,1,1077,1208,0.47,39.09,2285,2286,186,179,null,1,1,"no","A/A","No",1,200,"NP_203162.1:c.533C>T","NP_203162.1:p.Ser178Phe","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[2215,"NC_003081.2",8651,"SNV","C","T","Homozygous",1931,1932,99.95,1,1032,1150,0.47,37.84,2182,2183,188,172,null,1,1,"no","T/T","No",1,200,"NP_203163.1:c.721G>A","NP_203163.1:p.Ala241Thr","ND4",803822,null,"803822 [Gene Symbol: ND4] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 4] [Gene Type: protein-coding]","ND4"]
[2216,"NC_003081.2",11283,"SNV","C","T","Homozygous",2110,2111,99.95,1,1102,1253,0.47,39,2355,2356,184,170,null,1,1,"no","T/T","No",1,200,"NP_203166.1:c.1004C>T","NP_203166.1:p.Pro335Leu","CYTB",803817,null,"803817 [Gene Symbol: CYTB] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome b] [Gene Type: protein-coding]","CYTB"]
[2217,"NC_003081.2",11571,"SNV","A","G","Homozygous",1880,1880,100,1,1129,1009,0.47,38.41,2138,2138,183,166,null,1,1,"no","G/G","No",1,200,"NP_203167.1:c.886T>C","NP_203167.1:p.Ser296Pro","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[2218,"NC_003081.2",11787,"SNV","C","T","Homozygous",2071,2071,100,1,1210,1134,0.48,38.65,2344,2344,180,168,null,1,1,"no","T/T","No",1,200,"NP_203167.1:c.670G>A","NP_203167.1:p.Gly224Arg","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[2219,"NC_003081.2",11874,"SNV","C","T","Homozygous",2075,2075,100,1,1070,1293,0.45,38.55,2363,2363,188,169,null,1,1,"no","T/T","No",1,200,"NP_203167.1:c.583G>A","NP_203167.1:p.Val195Ile","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[2220,"NC_003081.2",12188,"SNV","G","A","Homozygous",1931,1932,99.95,1,1049,1158,0.48,38.82,2207,2208,187,167,null,1,1,"no","A/A","No",1,200,"NP_203167.1:c.269C>T","NP_203167.1:p.Ala90Val","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]

{"sheet":"S(High-quality)","index":6,"n_rows":1207,"n_cols":34,"rows_kept":1207}
["#","Chromosome","Region","Type","Reference","Allele","Zygosity","Count","Coverage","Frequency","Probability","Forward read count","Reverse read count","Forward/reverse balance","Average quality","Read count","Read coverage","# unique start positions","# unique end positions","BaseQRankSum","Read position test probability","Read direction test probability","Hyper-allelic","Genotype","Homopolymer","Homopolymer length","QUAL","Coding region change","Amino acid change","GCF_000002335.3_Tcas5.2_genomic_Gene","GeneID","description (GCF_000002335.3_Tcas5.2_genomic_Gene)","NCBI GENE description","NCBI GENE symbol"]
[1,"NC_007416.3",221070,"SNV","G","A","Heterozygous",10,20,50,1,5,9,0.36,36.7,14,25,6,6,2.23,0.38,0.51,"no","A/G","No",1,82.45,"XP_008198367.1:c.[293C>T]; XP_975863.1:c.[293C>T]","XP_008198367.1:p.[Ala98Val]; XP_975863.1:p.[Ala98Val]","LOC654960",654960,null,"654960 [Gene Symbol: LOC654960] [Locus Tag: TcasGA2_TC004686] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC654960] [Gene Type: protein-coding]","LOC654960; TcasGA2_TC004686"]
[2,"NC_007416.3",309251,"SNV","G","C","Homozygous",39,39,100,1,28,14,0.33,36.92,42,42,11,23,null,1,1,"no","C/C","No",1,138.12,"XP_015835038.1:c.3470C>G","XP_015835038.1:p.Pro1157Arg","LOC657847",657847,null,"657847 [Gene Symbol: LOC657847] [Locus Tag: TcasGA2_TC034516] [Chromosome: LGX] [Map Location: ] [Description: latrophilin Cirl] [Gene Type: protein-coding]","TcasGA2_TC034516; LOC657847"]
[4,"NC_007416.3",533651,"SNV","A","T","Homozygous",21,21,100,1,18,3,0.14,38.33,21,21,5,15,null,1,1,"no","T/T","No",1,85.53,"XP_008200364.2:c.1538T>A","XP_008200364.2:p.Ile513Lys","LOC658322",658322,null,"658322 [Gene Symbol: LOC658322] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC658322] [Gene Type: protein-coding]","LOC658322"]
[5,"NC_007416.3","533655..533656","MNV","AA","TC","Homozygous",22,22,100,1,18,4,0.18,37.42,22,22,6,16,null,1,1,"no","TC/TC","No",1,200,"XP_008200364.2:c.1533_1534delTTinsGA","XP_008200364.2:p.Ser512Thr","LOC658322",658322,null,"658322 [Gene Symbol: LOC658322] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC658322] [Gene Type: protein-coding]","LOC658322"]
[6,"NC_007416.3",533712,"SNV","A","C","Homozygous",30,30,100,1,20,13,0.39,38.33,33,33,6,20,null,1,1,"no","C/C","No",1,110.98,"XP_008200364.2:c.1477T>G","XP_008200364.2:p.Cys493Gly","LOC658322",658322,null,"658322 [Gene Symbol: LOC658322] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC658322] [Gene Type: protein-coding]","LOC658322"]
[7,"NC_007416.3","850927..850928","MNV","AA","TG","Homozygous",17,20,85,1,8,9,0.47,39.5,17,20,10,10,null,0.94,0.99,"no","TG/TG","No",1,200,"XP_008190747.1:c.[746_747delTTinsCA]; XP_008190748.1:c.[746_747delTTinsCA]; XP_008190746.1:c.[746_747delTTinsCA]","XP_008190747.1:p.[Ile249Thr]; XP_008190748.1:p.[Ile249Thr]; XP_008190746.1:p.[Ile249Thr]","LOC659434",659434,null,"659434 [Gene Symbol: LOC659434] [Locus Tag: TcasGA2_TC004713] [Chromosome: LGX] [Map Location: ] [Description: fibroblast growth factor receptor homolog 1] [Gene Type: protein-coding]","htl; DFR1; heartless; LOC659434; TcasGA2_TC004713"]
[8,"NC_007416.3",884448,"SNV","C","G","Homozygous",28,28,100,1,21,11,0.34,35.75,32,32,9,15,null,1,1,"no","G/G","No",1,104.95,"XP_015834664.1:c.[632G>C]; XP_015834659.1:c.[632G>C]","XP_015834664.1:p.[Ser211Thr]; XP_015834659.1:p.[Ser211Thr]","LOC103312276",103312276,null,"103312276 [Gene Symbol: LOC103312276] [Locus Tag: TcasGA2_TC004711] [Chromosome: LGX] [Map Location: ] [Description: major facilitator superfamily domain-containing protein 6] [Gene Type: protein-coding]","LOC103312276; TcasGA2_TC004711"]
[9,"NC_007416.3",1214862,"SNV","C","A","Heterozygous",8,20,40,1,8,0,0,41,8,23,3,6,1.54,0.54,0.63,"no","A/C","No",1,54.64,"XP_008200255.1:c.[131C>A]; XP_008200254.1:c.[131C>A]","XP_008200255.1:p.[Ser44*]; XP_008200254.1:p.[Ser44*]","LOC660909",660909,null,"660909 [Gene Symbol: LOC660909] [Locus Tag: TcasGA2_TC001602] [Chromosome: LGX] [Map Location: ] [Description: protein bunched, class 2/F/G isoform] [Gene Type: protein-coding]","bun; TcasGA2_TC001602; LOC660909; bunched"]
[11,"NC_007416.3",1244148,"SNV","C","T","Homozygous",20,20,100,1,12,15,0.44,37.7,27,27,7,13,null,1,1,"no","T/T","No",1,82.52,"XP_008200248.1:c.[1264G>A]; XP_001813427.1:c.[1264G>A]; XP_015835145.1:c.[1264G>A]","XP_008200248.1:p.[Glu422Lys]; XP_001813427.1:p.[Glu422Lys]; XP_015835145.1:p.[Glu422Lys]","LOC100142250",100142250,null,"100142250 [Gene Symbol: LOC100142250] [Locus Tag: TcasGA2_TC001632] [Chromosome: LGX] [Map Location: ] [Description: pro-interleukin-16] [Gene Type: protein-coding]","LOC100142250; TcasGA2_TC001632"]
[14,"NC_007416.3",1281111,"SNV","A","T","Homozygous",22,22,100,1,10,13,0.43,40.23,23,23,8,11,null,1,1,"no","T/T","No",1,88.53,"XP_015835095.1:c.[21T>A]; XP_971662.1:c.[21T>A]; XP_015835098.1:c.[21T>A]","XP_015835095.1:p.[Asn7Lys]; XP_971662.1:p.[Asn7Lys]; XP_015835098.1:p.[Asn7Lys]","LOC660326",660326,null,"660326 [Gene Symbol: LOC660326] [Locus Tag: TcasGA2_TC001629] [Chromosome: LGX] [Map Location: ] [Description: glutaryl-CoA dehydrogenase, mitochondrial] [Gene Type: protein-coding]","LOC660326; TcasGA2_TC001629"]
[15,"NC_007416.3",1315061,"SNV","T","C","Homozygous",23,23,100,1,11,13,0.46,36.3,24,24,14,12,null,1,1,"no","C/C","No",1,89.89,"XP_008200242.1:c.[151+235T>C]; XP_015835407.1:c.[2030A>G]","XP_015835407.1:p.Asn677Ser","LOC659752, LOC103314874","659752 , 103314874",null,"659752 [Gene Symbol: LOC659752] [Locus Tag: TcasGA2_TC001611] [Chromosome: LGX] [Map Location: ] [Description: SEC23-interacting protein] [Gene Type: protein-coding] || 103314874 [Gene Symbol: LOC103314874] [Locus Tag: TcasGA2_TC001625] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314874] [Gene Type: protein-coding]","TcasGA2_TC001611; LOC659752 || LOC103314874; TcasGA2_TC001625"]
[16,"NC_007416.3","1343015..1343016","MNV","TA","CT","Homozygous",21,21,100,1,8,18,0.31,36.8,26,26,12,13,null,1,1,"no","CT/CT","No",1,200,"XP_015833675.1:c.[319_320delTAinsCT]; XP_015833668.1:c.[598_599delTAinsCT]; XP_015833664.1:c.[598_599delTAinsCT]; XP_015833672.1:c.[598_599delTAinsCT]; XP_015833671.1:c.[598_599delTAinsCT]","XP_015833675.1:p.[Tyr107Leu]; XP_015833668.1:p.[Tyr200Leu]; XP_015833664.1:p.[Tyr200Leu]; XP_015833672.1:p.[Tyr200Leu]; XP_015833671.1:p.[Tyr200Leu]","LOC100141915",100141915,null,"100141915 [Gene Symbol: LOC100141915] [Locus Tag: TcasGA2_TC001615] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC100141915] [Gene Type: protein-coding]","LOC100141915; TcasGA2_TC001615"]
[17,"NC_007416.3",1438953,"SNV","A","C","Homozygous",25,25,100,1,12,13,0.48,39.28,25,25,10,15,null,1,1,"no","C/C","No",1,95.93,"XP_001807209.1:c.235A>C","XP_001807209.1:p.Thr79Pro","LOC100141737",100141737,null,"100141737 [Gene Symbol: LOC100141737] [Locus Tag: TcasGA2_TC004134] [Chromosome: LGX] [Map Location: ] [Description: kinesin-like protein KIF11-A] [Gene Type: protein-coding]","TcasGA2_TC004134; LOC100141737"]
[18,"NC_007416.3",1440290,"SNV","G","C","Homozygous",21,21,100,1,8,13,0.38,37.86,21,21,6,9,null,1,1,"no","C/C","No",1,83.89,"XP_001807209.1:c.1477G>C","XP_001807209.1:p.Ala493Pro","LOC100141737",100141737,null,"100141737 [Gene Symbol: LOC100141737] [Locus Tag: TcasGA2_TC004134] [Chromosome: LGX] [Map Location: ] [Description: kinesin-like protein KIF11-A] [Gene Type: protein-coding]","TcasGA2_TC004134; LOC100141737"]
[19,"NC_007416.3",2790154,"SNV","T","C","Homozygous",20,20,100,1,14,12,0.46,38.7,26,26,8,11,null,1,1,"no","C/C","No",1,80.88,"XP_966896.1:c.499T>C","XP_966896.1:p.Phe167Leu","LOC655274",655274,null,"655274 [Gene Symbol: LOC655274] [Locus Tag: TcasGA2_TC014174] [Chromosome: LGX] [Map Location: ] [Description: U3 small nucleolar RNA-interacting protein 2] [Gene Type: protein-coding]","LOC655274; TcasGA2_TC014174"]
[20,"NC_007416.3",2794607,"SNV","T","C","Homozygous",23,23,100,1,9,14,0.39,37.13,23,23,7,13,null,1,1,"no","C/C","No",1,89.9,"XP_966993.2:c.781A>G","XP_966993.2:p.Ile261Val","LOC655360",655360,null,"655360 [Gene Symbol: LOC655360] [Locus Tag: TcasGA2_TC013635] [Chromosome: LGX] [Map Location: ] [Description: fibrillin-1] [Gene Type: protein-coding]","TcasGA2_TC013635; LOC655360"]
[21,"NC_007416.3",2850060,"SNV","C","A","Homozygous",35,35,100,1,20,16,0.44,39.17,36,36,15,17,null,1,1,"no","A/A","No",1,127.62,"NP_001153720.1:c.1704C>A","NP_001153720.1:p.Asn568Lys","Sema-1a",656016,"semaphorin-1a","656016 [Gene Symbol: Sema-1a] [Locus Tag: TcasGA2_TC014179] [Chromosome: LGX] [Map Location: ] [Description: semaphorin-1a] [Gene Type: protein-coding]","TcasGA2_TC014179; Sema-1a"]
[22,"NC_007416.3",2943584,"SNV","C","G","Homozygous",31,31,100,1,27,4,0.13,35.45,31,31,7,22,null,1,1,"no","G/G","No",1,113.97,"XP_968749.2:c.[1038G>C]; XP_008193404.1:c.[1035G>C]","XP_968749.2:p.[Glu346Asp]; XP_008193404.1:p.[Glu345Asp]","LOC657185",657185,null,"657185 [Gene Symbol: LOC657185] [Locus Tag: TcasGA2_TC013625] [Chromosome: LGX] [Map Location: ] [Description: ralA-binding protein 1] [Gene Type: protein-coding]","LOC657185; TcasGA2_TC013625"]
[23,"NC_007416.3",3137613,"SNV","C","T","Homozygous",22,22,100,1,10,16,0.38,38.14,26,26,6,8,null,1,1,"no","T/T","No",1,88.53,"XP_008193417.2:c.3487G>A","XP_008193417.2:p.Val1163Ile","LOC658869",658869,null,"658869 [Gene Symbol: LOC658869] [Locus Tag: ] [Chromosome: LGX] [Map Location: LGX|LGX] [Description: ras-specific guanine nucleotide-releasing factor 2-like] [Gene Type: protein-coding]","LOC658869"]
[24,"NC_007416.3",3249938,"SNV","A","G","Homozygous",29,29,100,1,14,15,0.48,39.21,29,29,6,16,null,1,1,"no","G/G","No",1,107.96,"XP_971522.3:c.226T>C","XP_971522.3:p.Ser76Pro","LOC660174",660174,null,"660174 [Gene Symbol: LOC660174] [Locus Tag: TcasGA2_TC013601] [Chromosome: LGX] [Map Location: ] [Description: probable DNA mismatch repair protein Msh6] [Gene Type: protein-coding]","LOC660174; TcasGA2_TC013601"]
[26,"NC_007416.3",3424196,"SNV","G","C","Homozygous",30,30,100,1,17,17,0.5,38.23,34,34,11,20,null,1,1,"no","C/C","No",1,110.97,"XP_015833030.1:c.[27C>G]; XP_015833018.1:c.[27C>G]; XP_015833022.1:c.[27C>G]; XP_015833044.1:c.[27C>G]; XP_015833036.1:c.[27C>G]; XP_015833025.1:c.[27C>G]","XP_015833030.1:p.[His9Gln]; XP_015833018.1:p.[His9Gln]; XP_015833022.1:p.[His9Gln]; XP_015833044.1:p.[His9Gln]; XP_015833036.1:p.[His9Gln]; XP_015833025.1:p.[His9Gln]","LOC100141527",100141527,null,"100141527 [Gene Symbol: LOC100141527] [Locus Tag: TcasGA2_TC013586] [Chromosome: LGX] [Map Location: ] [Description: trithorax group protein osa] [Gene Type: protein-coding]","TcasGA2_TC013586; LOC100141527"]
[28,"NC_007416.3",3503198,"SNV","C","A","Heterozygous",10,23,43.48,1,10,6,0.38,40,16,30,5,5,1.36,0.19,1,"no","A/C","No",1,71.81,"XP_015839069.1:c.148C>A","XP_015839069.1:p.Gln50Lys","LOC660272",660272,null,"660272 [Gene Symbol: LOC660272] [Locus Tag: TcasGA2_TC014229] [Chromosome: LGX] [Map Location: ] [Description: trans-1,2-dihydrobenzene-1,2-diol dehydrogenase] [Gene Type: protein-coding]","LOC660272; TcasGA2_TC014229"]
[30,"NC_007416.3",3758965,"SNV","C","G","Heterozygous",23,34,67.65,1,11,18,0.38,35,29,41,6,11,0.61,0.88,1,"no","C/G","No",1,59.18,"XP_015839131.1:c.1671G>C","XP_015839131.1:p.Glu557Asp","LOC655313",655313,null,"655313 [Gene Symbol: LOC655313] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: semaphorin-5A] [Gene Type: protein-coding]","Sema-5c; LOC655313"]
[32,"NC_007416.3",3847955,"SNV","C","T","Homozygous",23,23,100,1,13,13,0.5,36.96,26,26,9,14,null,1,1,"no","T/T","No",1,91.55,"XP_008199865.1:c.688G>A","XP_008199865.1:p.Ala230Thr","LOC655974",655974,null,"655974 [Gene Symbol: LOC655974] [Locus Tag: TcasGA2_TC034520] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC655974] [Gene Type: protein-coding]","LOC655974; TcasGA2_TC034520"]
[33,"NC_007416.3",3877254,"SNV","G","A","Homozygous",27,27,100,1,21,8,0.28,38.15,29,29,11,16,null,1,1,"no","A/A","No",1,103.55,"XP_008199830.1:c.[430G>A]; XP_015836742.1:c.[430G>A]; XP_008199829.1:c.[430G>A]","XP_008199830.1:p.[Ala144Thr]; XP_015836742.1:p.[Ala144Thr]; XP_008199829.1:p.[Ala144Thr]","LOC103314770",103314770,null,"103314770 [Gene Symbol: LOC103314770] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: lymphoid-specific helicase-like] [Gene Type: protein-coding]","LOC103314770"]
[34,"NC_007416.3",3904550,"SNV","T","C","Heterozygous",16,29,55.17,1,4,12,0.25,38.38,16,32,6,7,0.42,0.29,0.31,"no","C/T","No",1,97.97,"XP_008199839.1:c.938A>G","XP_008199839.1:p.Lys313Arg","LOC656636",656636,null,"656636 [Gene Symbol: LOC656636] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: adenosylhomocysteinase 2-like] [Gene Type: protein-coding]","LOC656636"]
[35,"NC_007416.3","3906852^3906853","Insertion","-","AG","Heterozygous",11,20,55,1,11,0,0,38.41,11,23,5,9,1.74,0.18,0.33,"no","complex","No",1,200,"XP_008199838.1:c.[8_9insAG]; XP_015840526.1:c.[8_9insAG]","XP_008199838.1:p.[Val4fs]; XP_015840526.1:p.[Val4fs]","LOC656803",656803,null,"656803 [Gene Symbol: LOC656803] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: eukaryotic translation initiation factor 2D] [Gene Type: protein-coding]","LOC656803"]
[36,"NC_007416.3",3907160,"SNV","C","G","Heterozygous",15,24,62.5,1,13,5,0.28,35.93,18,27,6,7,-0.95,0.86,0.99,"no","C/G","No",1,61.56,"XP_008199838.1:c.[267C>G]; XP_015840526.1:c.[267C>G]","XP_008199838.1:p.[Ile89Met]; XP_015840526.1:p.[Ile89Met]","LOC656803",656803,null,"656803 [Gene Symbol: LOC656803] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: eukaryotic translation initiation factor 2D] [Gene Type: protein-coding]","LOC656803"]
[38,"NC_007416.3",4135351,"SNV","A","T","Homozygous",24,24,100,1,13,15,0.46,36.58,28,28,10,16,null,1,1,"no","T/T","No",1,94.56,"XP_008200618.1:c.360T>A","XP_008200618.1:p.Asp120Glu","LOC654848",654848,null,"654848 [Gene Symbol: LOC654848] [Locus Tag: TcasGA2_TC004732] [Chromosome: LGX] [Map Location: ] [Description: UMP-CMP kinase] [Gene Type: protein-coding]","LOC654848; TcasGA2_TC004732"]
[39,"NC_007416.3","4260610..4260611","MNV","AC","GT","Heterozygous",13,20,65,1,3,12,0.2,38.92,15,22,6,7,0.63,0.51,0.42,"no","complex","No",1,200,"XP_015835194.1:c.[60_61delACinsGT]; XP_015835189.1:c.[60_61delACinsGT]; XP_015835193.1:c.[60_61delACinsGT]; XP_015835191.1:c.[60_61delACinsGT]","XP_015835194.1:p.[Leu21Phe]; XP_015835189.1:p.[Leu21Phe]; XP_015835193.1:p.[Leu21Phe]; XP_015835191.1:p.[Leu21Phe]","LOC660695",660695,null,"660695 [Gene Symbol: LOC660695] [Locus Tag: TcasGA2_TC004638] [Chromosome: LGX] [Map Location: ] [Description: tsukushin] [Gene Type: protein-coding]","LOC660695; TcasGA2_TC004638"]
[40,"NC_007416.3",4304596,"SNV","C","G","Homozygous",20,20,100,1,15,5,0.25,36.9,20,20,12,12,null,1,1,"no","G/G","No",1,80.88,"XP_015834637.1:c.6253C>G","XP_015834637.1:p.Pro2085Ala","LOC660397",660397,null,"660397 [Gene Symbol: LOC660397] [Locus Tag: TcasGA2_TC004642] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC660397] [Gene Type: protein-coding]","LOC660397; TcasGA2_TC004642"]
[43,"NC_007416.3",5379331,"SNV","C","T","Homozygous",21,21,100,1,13,13,0.5,37.62,26,26,12,14,null,1,1,"no","T/T","No",1,85.53,"XP_008199409.1:c.[146C>T]; XP_015836754.1:c.[146C>T]; XP_015836756.1:c.[17C>T]; XP_972399.1:c.[146C>T]","XP_008199409.1:p.[Thr49Ile]; XP_015836754.1:p.[Thr49Ile]; XP_015836756.1:p.[Thr6Ile]; XP_972399.1:p.[Thr49Ile]","LOC661124",661124,null,"661124 [Gene Symbol: LOC661124] [Locus Tag: TcasGA2_TC010789] [Chromosome: LGX] [Map Location: ] [Description: lachesin] [Gene Type: protein-coding]","LOC661124; TcasGA2_TC010789"]
[44,"NC_007416.3",5536755,"SNV","G","A","Homozygous",29,29,100,1,15,20,0.43,36.69,35,35,12,16,null,1,1,"no","A/A","No",1,106.57,"XP_971938.1:c.3737C>T","XP_971938.1:p.Thr1246Ile","LOC660629",660629,null,"660629 [Gene Symbol: LOC660629] [Locus Tag: TcasGA2_TC010852] [Chromosome: LGX] [Map Location: ] [Description: trafficking protein particle complex subunit 8] [Gene Type: protein-coding]","TcasGA2_TC010852; LOC660629"]
[49,"NC_007416.3",5979687,"SNV","C","G","Homozygous",23,23,100,1,19,8,0.3,38.22,27,27,9,18,null,1,1,"no","G/G","No",1,89.91,"XP_970210.1:c.5213G>C","XP_970210.1:p.Ser1738Thr","LOC658755",658755,null,"658755 [Gene Symbol: LOC658755] [Locus Tag: TcasGA2_TC010839] [Chromosome: LGX] [Map Location: ] [Description: vitellogenin] [Gene Type: protein-coding]","LOC658755; TcasGA2_TC010839"]
[51,"NC_007416.3",6329144,"SNV","C","G","Homozygous",28,28,100,1,18,10,0.36,39.32,28,28,6,13,null,1,1,"no","G/G","No",1,104.96,"XP_015834614.1:c.578C>G","XP_015834614.1:p.Ala193Gly","LOC656239, LOC100381254","656239 , 100381254",null,"656239 [Gene Symbol: LOC656239] [Locus Tag: TcasGA2_TC004625] [Chromosome: LGX] [Map Location: ] [Description: very long-chain-fatty-acid--CoA ligase bubblegum] [Gene Type: protein-coding] || 100381254 [Gene Symbol: LOC100381254] [Locus Tag: TcasGA2_TC004746] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized protein LOC100381254] [Gene Type: protein-coding]","LOC656239; TcasGA2_TC004625 || GLEAN_04746; LOC100381254; TcasGA2_TC004746"]
[52,"NC_007416.3",6537255,"SNV","A","G","Homozygous",21,21,100,1,14,11,0.44,37.76,25,25,8,10,null,1,1,"no","G/G","No",1,83.89,"XP_015834338.1:c.4667A>G","XP_015834338.1:p.Lys1556Arg","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[53,"NC_007416.3",6538063,"SNV","A","T","Homozygous",28,28,100,1,18,22,0.45,37.32,40,40,14,13,null,1,1,"no","T/T","No",1,106.59,"XP_015834338.1:c.5384A>T","XP_015834338.1:p.*1795Leu","LOC657159",657159,null,"657159 [Gene Symbol: LOC657159] [Locus Tag: TcasGA2_TC004756] [Chromosome: LGX] [Map Location: ] [Description: neurofibromin] [Gene Type: protein-coding]","LOC657159; TcasGA2_TC004756"]
[56,"NC_007416.3",6725965,"SNV","T","G","Homozygous",21,21,100,1,6,15,0.29,35.38,21,21,6,14,null,1,1,"no","G/G","No",1,83.89,"XP_001810667.2:c.527A>C","XP_001810667.2:p.Lys176Thr","LOC659221",659221,null,"659221 [Gene Symbol: LOC659221] [Locus Tag: TcasGA2_TC004604] [Chromosome: LGX] [Map Location: ] [Description: ribonuclease H1] [Gene Type: protein-coding]","TcasGA2_TC004604; LOC659221"]
[58,"NC_007416.3",7346832,"SNV","G","A","Homozygous",26,26,100,1,16,12,0.43,35.42,28,28,11,21,null,1,1,"no","A/A","No",1,100.55,"XP_008200751.1:c.175G>A","XP_008200751.1:p.Ala59Thr","LOC103315000",103315000,null,"103315000 [Gene Symbol: LOC103315000] [Locus Tag: TcasGA2_TC031552] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103315000] [Gene Type: protein-coding]","TcasGA2_TC031552; LOC103315000"]
[59,"NC_007416.3",7592752,"SNV","G","A","Heterozygous",12,22,54.55,1,1,12,0.08,35.75,13,25,4,3,-0.69,0.03,0.13,"no","A/G","No",1,80.71,"XP_015840780.1:c.[199+80014G>A]; XP_015840873.1:c.[148G>A]; XP_015840777.1:c.[391+80014G>A]","XP_015840873.1:p.Ala50Thr","LOC660322, LOC107399269","660322 , 107399269",null,"660322 [Gene Symbol: LOC660322] [Locus Tag: TcasGA2_TC001692] [Chromosome: LGX] [Map Location: ] [Description: zinc finger protein basonuclin-2] [Gene Type: protein-coding] || 107399269 [Gene Symbol: LOC107399269] [Locus Tag: TcasGA2_TC031582] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC107399269] [Gene Type: protein-coding]","disco-r; TcasGA2_TC001692; LOC660322 || LOC107399269; TcasGA2_TC031582"]
[61,"NC_007416.3",7922861,"SNV","G","T","Heterozygous",8,21,38.1,1,8,0,0,40,8,24,1,5,1.09,0.03,0.24,"no","G/T","No",1,51.67,"XP_008199058.1:c.1507C>A","XP_008199058.1:p.Leu503Ile","LOC658611",658611,null,"658611 [Gene Symbol: LOC658611] [Locus Tag: TcasGA2_TC001759] [Chromosome: LGX] [Map Location: ] [Description: rho guanine nucleotide exchange factor 17] [Gene Type: protein-coding]","TcasGA2_TC001759; LOC658611"]
[63,"NC_007416.3",8671088,"SNV","C","A","Heterozygous",13,25,52,1,3,11,0.21,38.62,14,34,8,8,1.88,0.67,0.6,"no","A/C","No",1,98.55,"XP_008199008.1:c.[527C>A]; XP_008199007.1:c.[584C>A]; XP_015836611.1:c.[527C>A]","XP_008199008.1:p.[Ala176Glu]; XP_008199007.1:p.[Ala195Glu]; XP_015836611.1:p.[Ala176Glu]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[64,"NC_007416.3",8671200,"SNV","A","T","Heterozygous",14,32,43.75,1,10,4,0.29,38.5,14,33,8,9,1.58,0.21,0.84,"no","A/T","No",1,102.53,"XP_008199008.1:c.[639A>T]; XP_008199007.1:c.[696A>T]; XP_015836611.1:c.[639A>T]","XP_008199008.1:p.[Lys213Asn]; XP_008199007.1:p.[Lys232Asn]; XP_015836611.1:p.[Lys213Asn]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[65,"NC_007416.3",8671672,"SNV","G","A","Heterozygous",18,39,46.15,1,4,14,0.22,39.5,18,39,9,8,0.59,0.49,1,"no","A/G","No",1,133.73,"XP_008199008.1:c.[1111G>A]; XP_015836611.1:c.[1111G>A]; XP_008199007.1:c.[1168G>A]","XP_008199008.1:p.[Glu371Lys]; XP_015836611.1:p.[Glu371Lys]; XP_008199007.1:p.[Glu390Lys]","LOC103314509",103314509,null,"103314509 [Gene Symbol: LOC103314509] [Locus Tag: ] [Chromosome: LGX] [Map Location: ] [Description: uncharacterized LOC103314509] [Gene Type: protein-coding]","LOC103314509"]
[68,"NC_007417.3",1859532,"SNV","A","G","Homozygous",21,21,100,1,16,12,0.43,38.19,28,28,9,11,null,1,1,"no","G/G","No",1,80.88,"XP_969441.1:c.1814T>C","XP_969441.1:p.Val605Ala","LOC657922",657922,null,"657922 [Gene Symbol: LOC657922] [Locus Tag: TcasGA2_TC005228] [Chromosome: LG2] [Map Location: ] [Description: RNA polymerase-associated protein CTR9 homolog] [Gene Type: protein-coding]","LOC657922; TcasGA2_TC005228"]
[70,"NC_007417.3",2564911,"SNV","G","A","Homozygous",20,20,100,1,6,16,0.27,38.85,22,22,7,10,null,1,1,"no","A/A","No",1,82.49,"XP_015838592.1:c.[580G>A]; XP_015838597.1:c.[457G>A]","XP_015838592.1:p.[Asp194Asn]; XP_015838597.1:p.[Asp153Asn]","LOC103315010",103315010,null,"103315010 [Gene Symbol: LOC103315010] [Locus Tag: TcasGA2_TC004832] [Chromosome: LG2] [Map Location: ] [Description: homeobox protein rough] [Gene Type: protein-coding]","LOC103315010; TcasGA2_TC004832"]
[72,"NC_007417.3",3303190,"SNV","G","A","Homozygous",28,28,100,1,12,20,0.38,38.25,32,32,11,18,null,1,1,"no","A/A","No",1,94.53,"XP_967954.1:c.1957G>A","XP_967954.1:p.Val653Ile","LOC656322",656322,null,"656322 [Gene Symbol: LOC656322] [Locus Tag: TcasGA2_TC004862] [Chromosome: LG2] [Map Location: ] [Description: ligase III] [Gene Type: protein-coding]","LOC656322; TcasGA2_TC004862"]
[75,"NC_007417.3",3738558,"SNV","T","C","Heterozygous",12,25,48,1,8,4,0.33,38.17,12,26,8,9,0.92,0.81,1,"no","C/T","No",1,97.75,"XP_008200884.1:c.[2032+796A>G]; XP_015838476.1:c.[2640A>G]; XP_008200885.1:c.[1969+1119A>G]; XP_015838479.1:c.[2640A>G]","XP_015838476.1:p.[Ile880Met]; XP_015838479.1:p.[Ile880Met]","LOC659560",659560,null,"659560 [Gene Symbol: LOC659560] [Locus Tag: TcasGA2_TC004497] [Chromosome: LG2] [Map Location: ] [Description: protein hu-li tai shao] [Gene Type: protein-coding]","hts; TcasGA2_TC004497; LOC659560"]
[77,"NC_007417.3",4567705,"SNV","T","A","Homozygous",20,20,100,1,19,3,0.14,35.65,22,22,6,15,null,1,1,"no","A/A","No",1,82.49,"XP_008200863.1:c.784T>A","XP_008200863.1:p.Ser262Thr","Srf",661307,"serum response factor","661307 [Gene Symbol: Srf] [Locus Tag: TcasGA2_TC004911] [Chromosome: LG2] [Map Location: ] [Description: serum response factor] [Gene Type: protein-coding]","Srf; bs; TcasGA2_TC004911"]
[78,"NC_007417.3","4567739..4567741","Deletion","CGA","-","Homozygous",20,20,100,1,16,4,0.2,35.8,20,20,5,16,null,1,1,"no","-/-","No",1,200,"XP_008200863.1:c.818_820delCGA","XP_008200863.1:p.Thr279del","Srf",661307,"serum response factor","661307 [Gene Symbol: Srf] [Locus Tag: TcasGA2_TC004911] [Chromosome: LG2] [Map Location: ] [Description: serum response factor] [Gene Type: protein-coding]","Srf; bs; TcasGA2_TC004911"]
[79,"NC_007417.3",4807613,"SNV","G","C","Homozygous",23,23,100,1,17,12,0.41,38.57,29,29,11,11,null,1,1,"no","C/C","No",1,89.91,"XP_008200932.1:c.[2011-10C>G]; XP_973926.2:c.[2131C>G]; XP_015838161.1:c.[2131C>G]","XP_973926.2:p.[Leu711Val]; XP_015838161.1:p.[Leu711Val]","LOC662755",662755,null,"662755 [Gene Symbol: LOC662755] [Locus Tag: TcasGA2_TC004452] [Chromosome: LG2] [Map Location: ] [Description: toll-like receptor 2] [Gene Type: protein-coding]","LOC662755; TcasGA2_TC004452; Toll2"]
[80,"NC_007417.3",4993634,"SNV","G","A","Heterozygous",12,26,46.15,1,5,9,0.36,39,14,29,7,7,0.82,0.52,0.99,"no","A/G","No",1,93.48,"XP_008200957.1:c.1826G>A","XP_008200957.1:p.Arg609His","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[81,"NC_007417.3",4993640,"SNV","A","C","Heterozygous",12,32,37.5,1,5,8,0.38,38.33,13,34,7,7,0.99,0.17,0.83,"no","A/C","No",1,80.32,"XP_008200957.1:c.1832A>C","XP_008200957.1:p.Asn611Thr","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[83,"NC_007417.3",4993677,"SNV","G","T","Homozygous",29,29,100,1,18,12,0.4,39.03,30,30,13,18,null,1,1,"no","T/T","No",1,109.6,"XP_008200957.1:c.1869G>T","XP_008200957.1:p.Glu623Asp","LOC657239",657239,null,"657239 [Gene Symbol: LOC657239] [Locus Tag: TcasGA2_TC004952] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N] [Gene Type: protein-coding]","LOC657239; TcasGA2_TC004952"]
[84,"NC_007417.3","4995172..4995173","MNV","GG","AA","Homozygous",22,22,100,1,12,13,0.48,37.3,25,25,11,12,null,1,1,"no","AA/AA","No",1,200,"XP_015838797.1:c.1365_1366delCCinsTT","XP_015838797.1:p.Leu456Phe","LOC103315048",103315048,null,"103315048 [Gene Symbol: LOC103315048] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: sodium channel protein Nach-like] [Gene Type: protein-coding]","LOC103315048"]
[85,"NC_007417.3",4995181,"SNV","A","G","Heterozygous",8,22,36.36,1,0,8,0,38.25,8,25,2,2,0.55,0.05,0.08,"no","A/G","No",1,55.3,"XP_015838797.1:c.1357T>C","XP_015838797.1:p.Tyr453His","LOC103315048",103315048,null,"103315048 [Gene Symbol: LOC103315048] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: sodium channel protein Nach-like] [Gene Type: protein-coding]","LOC103315048"]
[86,"NC_007417.3",4998145,"SNV","A","G","Homozygous",21,21,100,1,18,10,0.36,36.05,28,28,9,11,null,1,1,"no","G/G","No",1,83.89,"XP_968946.1:c.829A>G","XP_968946.1:p.Ile277Val","LOC657390",657390,null,"657390 [Gene Symbol: LOC657390] [Locus Tag: TcasGA2_TC004953] [Chromosome: LG2] [Map Location: ] [Description: lysosomal alpha-glucosidase] [Gene Type: protein-coding]","TcasGA2_TC004953; LOC657390"]
[87,"NC_007417.3",5313776,"SNV","T","C","Homozygous",25,25,100,1,18,10,0.36,37.68,28,28,8,17,null,1,1,"no","C/C","No",1,95.92,"XP_970101.1:c.622T>C","XP_970101.1:p.Ser208Pro","LOC658643",658643,null,"658643 [Gene Symbol: LOC658643] [Locus Tag: TcasGA2_TC004963] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC658643] [Gene Type: protein-coding]","LOC658643; TcasGA2_TC004963"]
[88,"NC_007417.3",5453104,"SNV","T","C","Homozygous",20,20,100,1,9,15,0.38,35.7,24,24,10,11,null,1,1,"no","C/C","No",1,80.88,"XP_971504.1:c.434T>C","XP_971504.1:p.Ile145Thr","LOC660156",660156,null,"660156 [Gene Symbol: LOC660156] [Locus Tag: TcasGA2_TC004979] [Chromosome: LG2] [Map Location: ] [Description: puff-specific protein Bx42] [Gene Type: protein-coding]","LOC660156; TcasGA2_TC004979"]
[89,"NC_007417.3",5833326,"SNV","G","A","Homozygous",21,21,100,1,14,11,0.44,36.86,25,25,9,15,null,1,1,"no","A/A","No",1,85.5,"XP_008201310.2:c.[823G>A]; XP_015839849.1:c.[2083G>A]","XP_008201310.2:p.[Val275Ile]; XP_015839849.1:p.[Val695Ile]","LOC661310, LOC661247","661310 , 661247",null,"661310 [Gene Symbol: LOC661310] [Locus Tag: TcasGA2_TC000800] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC661310] [Gene Type: protein-coding] || 661247 [Gene Symbol: LOC661247] [Locus Tag: TcasGA2_TC000799] [Chromosome: LG2] [Map Location: ] [Description: apyrase] [Gene Type: protein-coding]","LOC661310; TcasGA2_TC000800 || TcasGA2_TC000799; LOC661247"]
[91,"NC_007417.3",6271723,"SNV","A","G","Homozygous",23,23,100,1,7,19,0.27,38.13,26,26,8,12,null,1,1,"no","G/G","No",1,89.91,"XP_015840607.1:c.[110T>C]; XP_015840605.1:c.[110T>C]; XP_015840604.1:c.[110T>C]; XP_015840603.1:c.[110T>C]; XP_015840606.1:c.[110T>C]; XP_015840608.1:c.[110T>C]","XP_015840607.1:p.[Val37Ala]; XP_015840605.1:p.[Val37Ala]; XP_015840604.1:p.[Val37Ala]; XP_015840603.1:p.[Val37Ala]; XP_015840606.1:p.[Val37Ala]; XP_015840608.1:p.[Val37Ala]","LOC662567",662567,null,"662567 [Gene Symbol: LOC662567] [Locus Tag: TcasGA2_TC000749] [Chromosome: LG2] [Map Location: ] [Description: spectrin alpha chain] [Gene Type: protein-coding]","TcasGA2_TC000749; LOC662567; alpha-Spec"]
[92,"NC_007417.3",6860038,"SNV","T","C","Homozygous",25,25,100,1,17,10,0.37,38.48,27,27,12,14,null,1,1,"no","C/C","No",1,95.93,"XP_015840483.1:c.[441+8574T>C]; XP_015840479.1:c.[441+8574T>C]; XP_008201382.2:c.[441+8574T>C]; XP_015840480.1:c.[441+8574T>C]; XP_015839833.1:c.[781A>G]; XP_015840482.1:c.[441+8574T>C]","XP_015839833.1:p.Ser261Gly","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[93,"NC_007417.3",6860074,"SNV","C","T","Homozygous",24,24,100,1,14,11,0.44,37.04,25,25,13,12,null,1,1,"no","T/T","No",1,94.56,"XP_015839833.1:c.[745G>A]; XP_008201382.2:c.[441+8610C>T]; XP_015840479.1:c.[441+8610C>T]; XP_015840483.1:c.[441+8610C>T]; XP_015840482.1:c.[441+8610C>T]; XP_015840480.1:c.[441+8610C>T]","XP_015839833.1:p.Gly249Ser","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[94,"NC_007417.3",6860110,"SNV","T","C","Homozygous",26,26,100,1,11,15,0.42,35.65,26,26,9,12,null,1,1,"no","C/C","No",1,98.94,"XP_015840479.1:c.[441+8646T>C]; XP_015839833.1:c.[709A>G]; XP_015840482.1:c.[441+8646T>C]; XP_015840480.1:c.[441+8646T>C]; XP_015840483.1:c.[441+8646T>C]; XP_008201382.2:c.[441+8646T>C]","XP_015839833.1:p.Ser237Gly","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[96,"NC_007417.3",6860137,"SNV","C","A","Heterozygous",18,27,66.67,1,6,14,0.3,35.28,20,29,7,9,0.41,0.9,1,"no","A/C","No",1,55.88,"XP_015840482.1:c.[441+8673C>A]; XP_015840483.1:c.[441+8673C>A]; XP_008201382.2:c.[441+8673C>A]; XP_015839833.1:c.[682G>T]; XP_015840479.1:c.[441+8673C>A]; XP_015840480.1:c.[441+8673C>A]","XP_015839833.1:p.Asp228Tyr","LOC663521, LOC662463","663521 , 662463",null,"663521 [Gene Symbol: LOC663521] [Locus Tag: TcasGA2_TC000848] [Chromosome: LG2] [Map Location: ] [Description: disks large 1 tumor suppressor protein] [Gene Type: protein-coding] || 662463 [Gene Symbol: LOC662463] [Locus Tag: TcasGA2_TC000723] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662463] [Gene Type: protein-coding]","LOC663521; TcasGA2_TC000848 || TcasGA2_TC000723; LOC662463"]
[98,"NC_007417.3",7062125,"SNV","T","G","Homozygous",21,21,100,1,16,15,0.48,37.38,31,31,11,12,null,1,1,"no","G/G","No",1,83.89,"XP_015840433.1:c.[315A>C]; XP_008201397.2:c.[315A>C]; XP_015840436.1:c.[315A>C]; XP_015840437.1:c.[315A>C]","XP_015840433.1:p.[Gln105His]; XP_008201397.2:p.[Gln105His]; XP_015840436.1:p.[Gln105His]; XP_015840437.1:p.[Gln105His]","LOC663627, LOC103315137","663627 , 103315137",null,"663627 [Gene Symbol: LOC663627] [Locus Tag: TcasGA2_TC000710] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: centrosomal protein of 290 kDa] [Gene Type: protein-coding] || 103315137 [Gene Symbol: LOC103315137] [Locus Tag: TcasGA2_TC032083] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315137] [Gene Type: protein-coding]","LOC663627; TcasGA2_TC000710 || LOC103315137; TcasGA2_TC032083"]
[99,"NC_007417.3",7153534,"SNV","A","C","Homozygous",24,24,100,1,17,11,0.39,38.25,28,28,7,13,null,1,1,"no","C/C","No",1,92.92,"XP_015840449.1:c.[39+22933T>G]; XP_008201399.1:c.[314A>C]","XP_008201399.1:p.Asn105Thr","LOC663672, LOC103315177","663672 , 103315177",null,"663672 [Gene Symbol: LOC663672] [Locus Tag: TcasGA2_TC000706] [Chromosome: LG2] [Map Location: ] [Description: protein sprint] [Gene Type: protein-coding] || 103315177 [Gene Symbol: LOC103315177] [Locus Tag: TcasGA2_TC000859] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC103315177] [Gene Type: protein-coding]","TcasGA2_TC000706; LOC663672 || TcasGA2_TC000859; LOC103315177"]
[100,"NC_007417.3",7642307,"SNV","A","C","Homozygous",22,22,100,1,11,15,0.42,36.73,26,26,11,11,null,1,1,"no","C/C","No",1,86.9,"XP_967870.1:c.19T>G","XP_967870.1:p.Ser7Ala","LOC663447",663447,null,"663447 [Gene Symbol: LOC663447] [Locus Tag: TcasGA2_TC000676] [Chromosome: LG2] [Map Location: ] [Description: fatty-acid amide hydrolase 2-B] [Gene Type: protein-coding]","LOC663447; TcasGA2_TC000676"]
[103,"NC_007417.3","8619110..8619111","MNV","CT","TG","Homozygous",21,21,100,1,13,8,0.38,36.05,21,21,8,13,null,1,1,"no","TG/TG","No",1,200,"XP_975465.1:c.126_127delCTinsTG","XP_975465.1:p.Ser43Ala","LOC664364",664364,null,"664364 [Gene Symbol: LOC664364] [Locus Tag: TcasGA2_TC000930] [Chromosome: LG2] [Map Location: ] [Description: SPARC] [Gene Type: protein-coding]","LOC664364; TcasGA2_TC000930"]
[104,"NC_007417.3",8699756,"SNV","G","C","Homozygous",20,20,100,1,12,12,0.5,38,24,24,8,13,null,1,1,"no","C/C","No",1,80.88,"XP_975499.1:c.[1584G>C]; XP_008201281.1:c.[346+2201G>C]","XP_975499.1:p.Glu528Asp","LOC664403, LOC664399","664403 , 664399",null,"664403 [Gene Symbol: LOC664403] [Locus Tag: TcasGA2_TC000945] [Chromosome: LG2] [Map Location: ] [Description: choline O-acetyltransferase] [Gene Type: protein-coding] || 664399 [Gene Symbol: LOC664399] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: vesicular acetylcholine transporter] [Gene Type: protein-coding]","LOC664403; TcasGA2_TC000945 || LOC664399"]
[105,"NC_007417.3",8900326,"SNV","C","T","Homozygous",21,21,100,1,15,10,0.4,37.38,25,25,9,13,null,1,1,"no","T/T","No",1,85.53,"XP_967720.2:c.[1529G>A]; XP_015840574.1:c.[1529G>A]; XP_015840573.1:c.[1529G>A]","XP_967720.2:p.[Arg510Lys]; XP_015840574.1:p.[Arg510Lys]; XP_015840573.1:p.[Arg510Lys]","LOC656076",656076,null,"656076 [Gene Symbol: LOC656076] [Locus Tag: TcasGA2_TC000625] [Chromosome: LG2] [Map Location: ] [Description: chaoptin] [Gene Type: protein-coding]","LOC656076; TcasGA2_TC000625"]
[107,"NC_007417.3",9108430,"SNV","T","C","Homozygous",20,20,100,1,10,19,0.34,38.75,29,29,10,15,null,1,1,"no","C/C","No",1,80.88,"XP_015840569.1:c.[10684A>G]; XP_015840566.1:c.[10834A>G]; XP_015840564.1:c.[10846A>G]; XP_015840567.1:c.[10795A>G]; XP_015840570.1:c.[10672A>G]; XP_015840565.1:c.[10834A>G]; XP_015840568.1:c.[10735A>G]","XP_015840569.1:p.[Thr3562Ala]; XP_015840566.1:p.[Thr3612Ala]; XP_015840564.1:p.[Thr3616Ala]; XP_015840567.1:p.[Thr3599Ala]; XP_015840570.1:p.[Thr3558Ala]; XP_015840565.1:p.[Thr3612Ala]; XP_015840568.1:p.[Thr3579Ala]","LOC658776",658776,null,"658776 [Gene Symbol: LOC658776] [Locus Tag: TcasGA2_TC000606] [Chromosome: LG2] [Map Location: ] [Description: histone-lysine N-methyltransferase 2C] [Gene Type: protein-coding]","LOC658776; TcasGA2_TC000606"]
[108,"NC_007417.3",9163774,"SNV","A","T","Homozygous",20,20,100,1,8,14,0.36,38,22,22,10,11,null,1,1,"no","T/T","No",1,82.52,"XP_008201007.1:c.425A>T","XP_008201007.1:p.Asn142Ile","LOC103315057",103315057,null,"103315057 [Gene Symbol: LOC103315057] [Locus Tag: TcasGA2_TC000980] [Chromosome: LG2] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103315057; TcasGA2_TC000980"]
[111,"NC_007417.3",9305682,"SNV","G","C","Homozygous",30,30,100,1,17,18,0.49,36.83,35,35,9,12,null,1,1,"no","C/C","No",1,110.97,"XP_971263.2:c.774C>G","XP_971263.2:p.Asn258Lys","LOC659904",659904,null,"659904 [Gene Symbol: LOC659904] [Locus Tag: TcasGA2_TC000592] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC659904] [Gene Type: protein-coding]","TcasGA2_TC000592; LOC659904"]
[112,"NC_007417.3",9305728,"SNV","A","G","Homozygous",20,20,100,1,7,20,0.26,40.45,27,27,6,6,null,1,1,"no","G/G","No",1,80.88,"XP_971263.2:c.728T>C","XP_971263.2:p.Val243Ala","LOC659904",659904,null,"659904 [Gene Symbol: LOC659904] [Locus Tag: TcasGA2_TC000592] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC659904] [Gene Type: protein-coding]","TcasGA2_TC000592; LOC659904"]
[113,"NC_007417.3",9315248,"SNV","G","A","Homozygous",20,21,95.24,1,15,8,0.35,35.45,23,24,5,12,null,0.99,1,"no","A/A","No",1,51.98,"XP_008201052.1:c.[4319C>T]; XP_015840684.1:c.[4319C>T]; XP_971386.1:c.[4316C>T]; XP_015840685.1:c.[4319C>T]; XP_008201053.1:c.[4319C>T]","XP_008201052.1:p.[Pro1440Leu]; XP_015840684.1:p.[Pro1440Leu]; XP_971386.1:p.[Pro1439Leu]; XP_015840685.1:p.[Pro1440Leu]; XP_008201053.1:p.[Pro1440Leu]","LOC660029",660029,null,"660029 [Gene Symbol: LOC660029] [Locus Tag: TcasGA2_TC000591] [Chromosome: LG2] [Map Location: ] [Description: methyl-CpG-binding domain protein 5] [Gene Type: protein-coding]","LOC660029; TcasGA2_TC000591"]
[114,"NC_007417.3",9480192,"SNV","C","T","Homozygous",20,20,100,1,16,6,0.27,36.05,22,22,8,12,null,1,1,"no","T/T","No",1,79.52,"XP_015840602.1:c.2590C>T","XP_015840602.1:p.Gln864*","LOC661248",661248,null,"661248 [Gene Symbol: LOC661248] [Locus Tag: TcasGA2_TC032130] [Chromosome: LG2] [Map Location: ] [Description: tyrosine-protein phosphatase non-receptor type 21] [Gene Type: protein-coding]","LOC661248; TcasGA2_TC032130"]
[115,"NC_007417.3",9846082,"SNV","A","C","Homozygous",27,27,100,1,13,20,0.39,36.67,33,33,14,17,null,1,1,"no","C/C","No",1,101.94,"XP_008201012.1:c.2586T>G","XP_008201012.1:p.Asp862Glu","LOC662363",662363,null,"662363 [Gene Symbol: LOC662363] [Locus Tag: TcasGA2_TC000558] [Chromosome: LG2] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 7] [Gene Type: protein-coding]","LOC662363; TcasGA2_TC000558"]
[116,"NC_007417.3",10008142,"SNV","G","C","Homozygous",25,25,100,1,12,17,0.41,36.36,29,29,10,8,null,1,1,"no","C/C","No",1,95.93,"XP_974504.1:c.739C>G","XP_974504.1:p.Gln247Glu","LOC663360",663360,null,"663360 [Gene Symbol: LOC663360] [Locus Tag: TcasGA2_TC000541] [Chromosome: LG2] [Map Location: ] [Description: IKK gamma] [Gene Type: protein-coding]","IKKg; LOC663360; TcasGA2_TC000541"]
[117,"NC_007417.3",10033578,"SNV","C","T","Homozygous",24,24,100,1,15,19,0.44,38.08,34,34,15,16,null,1,1,"no","T/T","No",1,94.55,"XP_015840642.1:c.[985G>A]; XP_015840643.1:c.[985G>A]; XP_015840645.1:c.[985G>A]; XP_008201155.1:c.[985G>A]","XP_015840642.1:p.[Gly329Ser]; XP_015840643.1:p.[Gly329Ser]; XP_015840645.1:p.[Gly329Ser]; XP_008201155.1:p.[Gly329Ser]","LOC663484",663484,null,"663484 [Gene Symbol: LOC663484] [Locus Tag: TcasGA2_TC000538] [Chromosome: LG2] [Map Location: ] [Description: DENN domain-containing protein 4C] [Gene Type: protein-coding]","LOC663484; TcasGA2_TC000538"]
[119,"NC_007417.3",10514647,"SNV","G","A","Homozygous",22,22,100,1,21,7,0.25,37.23,28,28,8,15,null,1,1,"no","A/A","No",1,88.51,"XP_015840558.1:c.[247C>T]; XP_975293.1:c.[223+24C>T]; XP_015840560.1:c.[247C>T]; XP_015840559.1:c.[247C>T]; XP_008201207.1:c.[223+24C>T]","XP_015840558.1:p.[Pro83Ser]; XP_015840560.1:p.[Pro83Ser]; XP_015840559.1:p.[Pro83Ser]","LOC664187",664187,null,"664187 [Gene Symbol: LOC664187] [Locus Tag: TcasGA2_TC000505] [Chromosome: LG2] [Map Location: ] [Description: importin subunit alpha-5] [Gene Type: protein-coding]","TcasGA2_TC000505; LOC664187"]
[120,"NC_007417.3",10518410,"SNV","C","A","Heterozygous",10,22,45.45,1,0,10,0,40.2,10,24,1,2,2.44,0.11,0.23,"no","A/C","No",1,74.58,"XP_008201208.1:c.[1575G>T]; XP_008201209.1:c.[1521G>T]","XP_008201208.1:p.[Glu525Asp]; XP_008201209.1:p.[Glu507Asp]","LOC103315119",103315119,null,"103315119 [Gene Symbol: LOC103315119] [Locus Tag: TcasGA2_TC000504] [Chromosome: LG2] [Map Location: ] [Description: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13] [Gene Type: protein-coding]","TcasGA2_TC000504; LOC103315119"]
[121,"NC_007417.3","10580397^10580398","Insertion","-","G","Heterozygous",10,20,50,1,2,10,0.17,38.6,12,26,3,4,2.23,0.32,0.67,"no","-/G","No",1,82.08,"XP_975348.1:c.1499_1500insG","XP_975348.1:p.Pro502fs","LOC664244",664244,null,"664244 [Gene Symbol: LOC664244] [Locus Tag: TcasGA2_TC001075] [Chromosome: LG2] [Map Location: ] [Description: tubulin polyglutamylase ttll6] [Gene Type: protein-coding]","TcasGA2_TC001075; LOC664244"]
[122,"NC_007417.3","10580398^10580399","Insertion","-","AC","Heterozygous",10,20,50,1,2,10,0.17,37.15,12,26,4,5,1.95,0.36,0.67,"no","complex","No",1,200,"XP_975348.1:c.1500_1501insAC","XP_975348.1:p.Lys501fs","LOC664244",664244,null,"664244 [Gene Symbol: LOC664244] [Locus Tag: TcasGA2_TC001075] [Chromosome: LG2] [Map Location: ] [Description: tubulin polyglutamylase ttll6] [Gene Type: protein-coding]","TcasGA2_TC001075; LOC664244"]
[123,"NC_007417.3",10580688,"SNV","A","T","Homozygous",36,36,100,1,13,27,0.33,37.72,40,40,14,15,null,1,1,"no","T/T","No",1,130.66,"XP_975348.1:c.1790A>T","XP_975348.1:p.Lys597Met","LOC664244",664244,null,"664244 [Gene Symbol: LOC664244] [Locus Tag: TcasGA2_TC001075] [Chromosome: LG2] [Map Location: ] [Description: tubulin polyglutamylase ttll6] [Gene Type: protein-coding]","TcasGA2_TC001075; LOC664244"]
[126,"NC_007417.3",10905565,"SNV","C","G","Heterozygous",8,20,40,1,5,3,0.38,40,8,20,3,5,null,0.06,0.55,"no","G/T","No",1,62.3,"XP_967801.1:c.840G>C","XP_967801.1:p.Glu280Asp","LOC656163",656163,null,"656163 [Gene Symbol: LOC656163] [Locus Tag: TcasGA2_TC000470] [Chromosome: LG2] [Map Location: ] [Description: sine oculis-binding protein] [Gene Type: protein-coding]","TcasGA2_TC000470; LOC656163; Sobp"]
[127,"NC_007417.3",10920538,"SNV","G","A","Homozygous",20,20,100,1,14,6,0.3,38.35,20,20,8,12,null,1,1,"no","A/A","No",1,82.49,"XP_968425.2:c.46G>A","XP_968425.2:p.Ala16Thr","LOC656831",656831,null,"656831 [Gene Symbol: LOC656831] [Locus Tag: TcasGA2_TC001101] [Chromosome: LG2] [Map Location: ] [Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10] [Gene Type: protein-coding]","Ddx10; LOC656831; TcasGA2_TC001101"]
[128,"NC_007417.3",11004685,"SNV","G","C","Homozygous",24,24,100,1,17,7,0.29,39.04,24,24,11,15,null,1,1,"no","C/C","No",1,92.92,"XP_968878.1:c.1531G>C","XP_968878.1:p.Ala511Pro","LOC657319",657319,null,"657319 [Gene Symbol: LOC657319] [Locus Tag: TcasGA2_TC001105] [Chromosome: LG2] [Map Location: ] [Description: protein downstream neighbor of son homolog] [Gene Type: protein-coding]","TcasGA2_TC001105; LOC657319"]
[129,"NC_007417.3",11039801,"SNV","G","T","Homozygous",24,24,100,1,4,20,0.17,36.79,24,24,6,12,null,1,1,"no","T/T","No",1,94.56,"XP_969172.2:c.[32C>A]; XP_008201523.1:c.[32C>A]","XP_969172.2:p.[Thr11Asn]; XP_008201523.1:p.[Thr11Asn]","LOC657632",657632,null,"657632 [Gene Symbol: LOC657632] [Locus Tag: TcasGA2_TC000459] [Chromosome: LG2] [Map Location: ] [Description: monocarboxylate transporter 12-B] [Gene Type: protein-coding]","LOC657632; TcasGA2_TC000459"]
[131,"NC_007417.3",11294631,"SNV","C","G","Homozygous",22,22,100,1,18,4,0.18,38.09,22,22,7,15,null,1,1,"no","G/G","No",1,86.9,"XP_015840882.1:c.1449G>C","XP_015840882.1:p.Met483Ile","LOC659905",659905,null,"659905 [Gene Symbol: LOC659905] [Locus Tag: TcasGA2_TC000439] [Chromosome: LG2] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","TcasGA2_TC000439; LOC659905"]
[132,"NC_007417.3",11344935,"SNV","G","A","Homozygous",21,21,100,1,5,17,0.23,37.33,22,22,11,11,null,1,1,"no","A/A","No",1,85.5,"XP_015840722.1:c.[2683G>A]; XP_015840720.1:c.[3019G>A]; XP_015840719.1:c.[3022G>A]; XP_008201547.1:c.[3022G>A]","XP_015840722.1:p.[Val895Met]; XP_015840720.1:p.[Val1007Met]; XP_015840719.1:p.[Val1008Met]; XP_008201547.1:p.[Val1008Met]","LOC100141688",100141688,null,"100141688 [Gene Symbol: LOC100141688] [Locus Tag: TcasGA2_TC001123] [Chromosome: LG2] [Map Location: LG2|LG2] [Description: FERM and PDZ domain-containing protein 2] [Gene Type: protein-coding]","LOC100141688; TcasGA2_TC001123"]
[133,"NC_007417.3",11409803,"SNV","T","A","Homozygous",20,20,100,1,5,15,0.25,38.35,20,20,6,9,null,1,1,"no","A/A","No",1,79.48,"XP_015840768.1:c.[3376T>A]; XP_015840769.1:c.[3331T>A]; XP_971725.1:c.[2143T>A]; XP_008201549.1:c.[2083T>A]","XP_015840768.1:p.[Leu1126Met]; XP_015840769.1:p.[Leu1111Met]; XP_971725.1:p.[Leu715Met]; XP_008201549.1:p.[Leu695Met]","LOC660401",660401,null,"660401 [Gene Symbol: LOC660401] [Locus Tag: TcasGA2_TC001126] [Chromosome: LG2] [Map Location: ] [Description: tyrosine-protein phosphatase non-receptor type 13] [Gene Type: protein-coding]","LOC660401; TcasGA2_TC001126"]
[134,"NC_007417.3",11428415,"SNV","A","T","Homozygous",24,24,100,1,8,16,0.33,39.29,24,24,8,9,null,1,1,"no","T/T","No",1,94.55,"NP_001165842.1:c.627A>T","NP_001165842.1:p.Glu209Asp","UDE",660526,"uracil-DNA degrading factor","660526 [Gene Symbol: UDE] [Locus Tag: TcasGA2_TC030651] [Chromosome: LG2] [Map Location: ] [Description: uracil-DNA degrading factor] [Gene Type: protein-coding]","UDE; TcasGA2_TC030651"]
[135,"NC_007417.3",11486310,"SNV","G","A","Homozygous",40,40,100,1,18,26,0.41,38.27,44,44,17,24,null,1,1,"no","A/A","No",1,142.56,"XP_972317.1:c.488G>A","XP_972317.1:p.Arg163Lys","LOC661035",661035,null,"661035 [Gene Symbol: LOC661035] [Locus Tag: TcasGA2_TC001136] [Chromosome: LG2] [Map Location: ] [Description: sorbitol dehydrogenase] [Gene Type: protein-coding]","TcasGA2_TC001136; LOC661035"]
[137,"NC_007417.3",11832190,"SNV","C","T","Homozygous",21,21,100,1,10,16,0.38,38.71,26,26,7,9,null,1,1,"no","T/T","No",1,85.52,"XP_015840846.1:c.[485G>A]; XP_015840845.1:c.[485G>A]","XP_015840846.1:p.[Arg162His]; XP_015840845.1:p.[Arg162His]","LOC103315243",103315243,null,"103315243 [Gene Symbol: LOC103315243] [Locus Tag: TcasGA2_TC000409] [Chromosome: LG2] [Map Location: ] [Description: LIM and SH3 domain protein Lasp] [Gene Type: protein-coding]","TcasGA2_TC000409; LOC103315243"]
[138,"NC_007417.3",11916098,"SNV","T","C","Homozygous",31,31,100,1,15,22,0.41,37.61,37,37,10,16,null,1,1,"no","C/C","No",1,113.98,"XP_015840549.1:c.[12913A>G]; XP_015840542.1:c.[12937A>G]; XP_015840544.1:c.[12913A>G]; XP_015840543.1:c.[12937A>G]; XP_015840545.1:c.[12832A>G]; XP_015840541.1:c.[12937A>G]; XP_015840547.1:c.[12937A>G]; XP_015840548.1:c.[12808A>G]; XP_015840546.1:c.[12937A>G]","XP_015840549.1:p.[Thr4305Ala]; XP_015840542.1:p.[Thr4313Ala]; XP_015840544.1:p.[Thr4305Ala]; XP_015840543.1:p.[Thr4313Ala]; XP_015840545.1:p.[Thr4278Ala]; XP_015840541.1:p.[Thr4313Ala]; XP_015840547.1:p.[Thr4313Ala]; XP_015840548.1:p.[Thr4270Ala]; XP_015840546.1:p.[Thr4313Ala]","LOC662569",662569,null,"662569 [Gene Symbol: LOC662569] [Locus Tag: TcasGA2_TC000401] [Chromosome: LG2] [Map Location: ] [Description: fat-like cadherin-related tumor suppressor homolog] [Gene Type: protein-coding]","LOC662569; FAT; cadherin; TcasGA2_TC000401"]
[139,"NC_007417.3",11922810,"SNV","A","G","Heterozygous",13,21,61.9,1,3,13,0.19,35.54,16,29,3,8,1.63,0.29,0.91,"no","A/G","No",1,56.56,"XP_015840546.1:c.[7832T>C]; XP_015840549.1:c.[7808T>C]; XP_015840543.1:c.[7832T>C]; XP_015840548.1:c.[7703T>C]; XP_015840547.1:c.[7832T>C]; XP_015840542.1:c.[7832T>C]; XP_015840545.1:c.[7727T>C]; XP_015840544.1:c.[7808T>C]; XP_015840541.1:c.[7832T>C]","XP_015840546.1:p.[Ile2611Thr]; XP_015840549.1:p.[Ile2603Thr]; XP_015840543.1:p.[Ile2611Thr]; XP_015840548.1:p.[Ile2568Thr]; XP_015840547.1:p.[Ile2611Thr]; XP_015840542.1:p.[Ile2611Thr]; XP_015840545.1:p.[Ile2576Thr]; XP_015840544.1:p.[Ile2603Thr]; XP_015840541.1:p.[Ile2611Thr]","LOC662569",662569,null,"662569 [Gene Symbol: LOC662569] [Locus Tag: TcasGA2_TC000401] [Chromosome: LG2] [Map Location: ] [Description: fat-like cadherin-related tumor suppressor homolog] [Gene Type: protein-coding]","LOC662569; FAT; cadherin; TcasGA2_TC000401"]
[141,"NC_007417.3",12101072,"SNV","G","C","Homozygous",24,24,100,1,16,13,0.45,36.71,29,29,9,14,null,1,1,"no","C/C","No",1,92.91,"XP_015840677.1:c.19G>C","XP_015840677.1:p.Val7Leu","LOC662758",662758,null,"662758 [Gene Symbol: LOC662758] [Locus Tag: TcasGA2_TC001157] [Chromosome: LG2] [Map Location: ] [Description: serine protease P23] [Gene Type: protein-coding]","LOC662758; TcasGA2_TC001157; P23; P24"]
[143,"NC_007417.3",12271437,"SNV","T","A","Heterozygous",9,20,45,1,5,5,0.5,37,10,22,5,8,-0.04,0.34,0.6,"no","A/T","No",1,72.07,"XP_974709.1:c.10A>T","XP_974709.1:p.Ile4Leu","LOC663577",663577,null,"663577 [Gene Symbol: LOC663577] [Locus Tag: TcasGA2_TC000373] [Chromosome: LG2] [Map Location: ] [Description: protein PTCD3 homolog, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC000373; LOC663577"]
[144,"NC_007417.3","12278002^12278003","Insertion","-","GCG","Heterozygous",7,20,35,1,7,0,0,40.24,7,20,2,5,5.7,0.02,0.1,"no","complex","No",1,200,"XP_974777.1:c.479_480insCGC","XP_974777.1:p.Ala160_His161insAla","LOC663648",663648,null,"663648 [Gene Symbol: LOC663648] [Locus Tag: TcasGA2_TC000369] [Chromosome: LG2] [Map Location: ] [Description: larval/pupal cuticle protein H1C] [Gene Type: protein-coding]","TcasGA2_TC000369; LOC663648"]
[145,"NC_007417.3",12281481,"SNV","C","A","Heterozygous",13,23,56.52,1,11,5,0.31,38.08,16,34,5,10,2.98,0.19,0.93,"no","A/C","No",1,79.77,"XP_015840879.1:c.[2107G>T]; XP_015840881.1:c.[1321G>T]; XP_015840880.1:c.[2107G>T]; XP_015840877.1:c.[2107G>T]; XP_015840878.1:c.[2107G>T]","XP_015840879.1:p.[Ala703Ser]; XP_015840881.1:p.[Ala441Ser]; XP_015840880.1:p.[Ala703Ser]; XP_015840877.1:p.[Ala703Ser]; XP_015840878.1:p.[Ala703Ser]","LOC103315239",103315239,null,"103315239 [Gene Symbol: LOC103315239] [Locus Tag: TcasGA2_TC000368] [Chromosome: LG2] [Map Location: ] [Description: prominin-1-A] [Gene Type: protein-coding]","TcasGA2_TC000368; LOC103315239"]
[146,"NC_007417.3",12357199,"SNV","C","G","Homozygous",22,22,100,1,2,21,0.09,37.68,23,23,5,8,null,1,1,"no","G/G","No",1,86.9,"XP_008201636.1:c.[3283G>C]; XP_015840708.1:c.[3283G>C]; XP_008201639.1:c.[3259G>C]; XP_008201638.1:c.[3283G>C]","XP_008201636.1:p.[Ala1095Pro]; XP_015840708.1:p.[Ala1095Pro]; XP_008201639.1:p.[Ala1087Pro]; XP_008201638.1:p.[Ala1095Pro]","LOC663861",663861,null,"663861 [Gene Symbol: LOC663861] [Locus Tag: TcasGA2_TC000366] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC663861] [Gene Type: protein-coding]","LOC663861; TcasGA2_TC000366"]
[148,"NC_007417.3",12367601,"SNV","G","C","Heterozygous",14,23,60.87,1,12,3,0.2,37.93,15,24,6,12,-1.01,0.94,0.92,"no","C/G","No",1,64.1,"XP_008201638.1:c.[402C>G]; XP_015840708.1:c.[402C>G]; XP_008201639.1:c.[402C>G]; XP_008201636.1:c.[402C>G]","XP_008201638.1:p.[Asp134Glu]; XP_015840708.1:p.[Asp134Glu]; XP_008201639.1:p.[Asp134Glu]; XP_008201636.1:p.[Asp134Glu]","LOC663861",663861,null,"663861 [Gene Symbol: LOC663861] [Locus Tag: TcasGA2_TC000366] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC663861] [Gene Type: protein-coding]","LOC663861; TcasGA2_TC000366"]
[149,"NC_007417.3",12393906,"SNV","G","T","Homozygous",20,20,100,1,7,14,0.33,36.45,21,21,9,8,null,1,1,"no","T/T","No",1,82.52,"XP_975061.1:c.[747G>T]; XP_008201645.1:c.[747G>T]; XP_008201644.1:c.[768G>T]; XP_008201646.1:c.[747G>T]","XP_975061.1:p.[Gln249His]; XP_008201645.1:p.[Gln249His]; XP_008201644.1:p.[Gln256His]; XP_008201646.1:p.[Gln249His]","LOC663941",663941,null,"663941 [Gene Symbol: LOC663941] [Locus Tag: TcasGA2_TC001192] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 1] [Gene Type: protein-coding]","TcasGA2_TC001192; LOC663941; Tiap1"]
[150,"NC_007417.3",12393908,"SNV","G","A","Homozygous",20,20,100,1,7,14,0.33,37.2,21,21,9,8,null,1,1,"no","A/A","No",1,82.49,"XP_008201646.1:c.[749G>A]; XP_008201644.1:c.[770G>A]; XP_008201645.1:c.[749G>A]; XP_975061.1:c.[749G>A]","XP_008201646.1:p.[Gly250Asp]; XP_008201644.1:p.[Gly257Asp]; XP_008201645.1:p.[Gly250Asp]; XP_975061.1:p.[Gly250Asp]","LOC663941",663941,null,"663941 [Gene Symbol: LOC663941] [Locus Tag: TcasGA2_TC001192] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 1] [Gene Type: protein-coding]","TcasGA2_TC001192; LOC663941; Tiap1"]
[151,"NC_007417.3",12393914,"SNV","T","C","Homozygous",20,20,100,1,7,19,0.27,36.35,26,26,6,7,null,1,1,"no","C/C","No",1,80.88,"XP_008201644.1:c.[776T>C]; XP_008201645.1:c.[755T>C]; XP_008201646.1:c.[755T>C]; XP_975061.1:c.[755T>C]","XP_008201644.1:p.[Ile259Thr]; XP_008201645.1:p.[Ile252Thr]; XP_008201646.1:p.[Ile252Thr]; XP_975061.1:p.[Ile252Thr]","LOC663941",663941,null,"663941 [Gene Symbol: LOC663941] [Locus Tag: TcasGA2_TC001192] [Chromosome: LG2] [Map Location: ] [Description: inhibitor of apoptosis 1] [Gene Type: protein-coding]","TcasGA2_TC001192; LOC663941; Tiap1"]
[152,"NC_007417.3",13114328,"SNV","C","T","Homozygous",20,20,100,1,8,12,0.4,38.55,20,20,8,10,null,1,1,"no","T/T","No",1,82.52,"XP_015840704.1:c.5471C>T","XP_015840704.1:p.Thr1824Ile","LOC659567",659567,null,"659567 [Gene Symbol: LOC659567] [Locus Tag: TcasGA2_TC001238] [Chromosome: LG2] [Map Location: ] [Description: proto-oncogene tyrosine-protein kinase ROS] [Gene Type: protein-coding]","sev; TcasGA2_TC001238; sevenless; LOC659567"]
[153,"NC_007417.3","13120067..13120068","MNV","AA","CG","Homozygous",36,36,100,1,14,32,0.3,38.24,46,46,11,17,null,1,1,"no","CG/CG","No",1,200,"XP_015840552.1:c.[1146_1147delAAinsCG]; XP_015840551.1:c.[1146_1147delAAinsCG]","XP_015840552.1:p.[Ile383Val]; XP_015840551.1:p.[Ile383Val]","LOC659632",659632,null,"659632 [Gene Symbol: LOC659632] [Locus Tag: TcasGA2_TC001240] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase UHRF1] [Gene Type: protein-coding]","TcasGA2_TC001240; LOC659632"]
[154,"NC_007417.3",13120070,"SNV","C","G","Homozygous",35,36,97.22,1,8,31,0.21,37.86,39,41,8,12,null,1,1,"no","G/G","No",1,97.82,"XP_015840552.1:c.[1149C>G]; XP_015840551.1:c.[1149C>G]","XP_015840552.1:p.[Ile383Met]; XP_015840551.1:p.[Ile383Met]","LOC659632",659632,null,"659632 [Gene Symbol: LOC659632] [Locus Tag: TcasGA2_TC001240] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase UHRF1] [Gene Type: protein-coding]","TcasGA2_TC001240; LOC659632"]
[155,"NC_007417.3",13120785,"SNV","T","C","Homozygous",20,20,100,1,8,15,0.35,37.65,23,23,6,7,null,1,1,"no","C/C","No",1,80.88,"XP_015840552.1:c.[1757T>C]; XP_015840551.1:c.[1767T>C]","XP_015840552.1:p.[Leu586Pro]","LOC659632",659632,null,"659632 [Gene Symbol: LOC659632] [Locus Tag: TcasGA2_TC001240] [Chromosome: LG2] [Map Location: ] [Description: E3 ubiquitin-protein ligase UHRF1] [Gene Type: protein-coding]","TcasGA2_TC001240; LOC659632"]
[156,"NC_007417.3",13149392,"SNV","C","A","Homozygous",22,22,100,1,6,20,0.23,36.18,26,26,10,11,null,1,1,"no","A/A","No",1,88.51,"XP_971265.1:c.4720C>A","XP_971265.1:p.Pro1574Thr","LOC659906",659906,null,"659906 [Gene Symbol: LOC659906] [Locus Tag: TcasGA2_TC001242] [Chromosome: LG2] [Map Location: ] [Description: integrator complex subunit 1] [Gene Type: protein-coding]","TcasGA2_TC001242; LOC659906"]
[157,"NC_007417.3",13149815,"SNV","G","A","Homozygous",20,20,100,1,7,17,0.29,37.2,24,24,10,10,null,1,1,"no","A/A","No",1,79.48,"XP_971265.1:c.5143G>A","XP_971265.1:p.Val1715Ile","LOC659906",659906,null,"659906 [Gene Symbol: LOC659906] [Locus Tag: TcasGA2_TC001242] [Chromosome: LG2] [Map Location: ] [Description: integrator complex subunit 1] [Gene Type: protein-coding]","TcasGA2_TC001242; LOC659906"]
[158,"NC_007417.3",13212755,"SNV","A","G","Homozygous",24,26,92.31,1,19,15,0.44,36,34,37,8,12,null,1,1,"no","G/G","No",1,62.71,"XP_015840752.1:c.[160A>G]; XP_015840754.1:c.[160A>G]; XP_015840750.1:c.[160A>G]; XP_015840753.1:c.[160A>G]","XP_015840752.1:p.[Ile54Val]; XP_015840754.1:p.[Ile54Val]; XP_015840750.1:p.[Ile54Val]; XP_015840753.1:p.[Ile54Val]","LOC107399254",107399254,null,"107399254 [Gene Symbol: LOC107399254] [Locus Tag: TcasGA2_TC030252] [Chromosome: LG2] [Map Location: ] [Description: putative gustatory receptor 28b] [Gene Type: protein-coding]","TcasGA2_TC030252; TcGr164; LOC107399254"]
[160,"NC_007417.3",13327819,"SNV","A","T","Homozygous",21,21,100,1,6,20,0.23,39.48,26,26,8,14,null,1,1,"no","T/T","No",1,85.52,"XP_015839603.1:c.[7110+86A>T]; XP_015840749.1:c.[1240A>T]","XP_015840749.1:p.Met414Leu","LOC661831, LOC107399253","661831 , 107399253","aminopeptidase N-like protein","661831 [Gene Symbol: LOC661831] [Locus Tag: TcasGA2_TC001259] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N-like protein] [Gene Type: protein-coding] || 107399253 [Gene Symbol: LOC107399253] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N-like] [Gene Type: protein-coding]","TcasGA2_TC001259; GLEAN_01262; LOC661831 || LOC107399253"]
[161,"NC_007417.3",13328707,"SNV","C","A","Homozygous",23,23,100,1,16,9,0.36,38.22,25,25,10,16,null,1,1,"no","A/A","No",1,91.51,"XP_015839603.1:c.[7111-533C>A]; XP_015840749.1:c.[1897C>A]","XP_015840749.1:p.Arg633Ser","LOC661831, LOC107399253","661831 , 107399253","aminopeptidase N-like protein","661831 [Gene Symbol: LOC661831] [Locus Tag: TcasGA2_TC001259] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N-like protein] [Gene Type: protein-coding] || 107399253 [Gene Symbol: LOC107399253] [Locus Tag: ] [Chromosome: LG2] [Map Location: ] [Description: aminopeptidase N-like] [Gene Type: protein-coding]","TcasGA2_TC001259; GLEAN_01262; LOC661831 || LOC107399253"]
[162,"NC_007417.3",13390168,"SNV","G","C","Homozygous",24,24,100,1,14,13,0.48,39.46,27,27,7,18,null,1,1,"no","C/C","No",1,92.92,"XP_015840711.1:c.[253+17565C>G]; XP_015840713.1:c.[196+17565C>G]; XP_008190285.1:c.[566C>G]; XP_008190286.1:c.[211+17565C>G]","XP_008190285.1:p.Thr189Ser","LOC661960, LOC103312156","661960 , 103312156",null,"661960 [Gene Symbol: LOC661960] [Locus Tag: TcasGA2_TC000286] [Chromosome: LG2] [Map Location: ] [Description: Kv channel-interacting protein 1] [Gene Type: protein-coding] || 103312156 [Gene Symbol: LOC103312156] [Locus Tag: TcasGA2_TC000292] [Chromosome: LG2] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC661960; TcasGA2_TC000286 || TcasGA2_TC000292; LOC103312156"]
[163,"NC_007417.3",13399520,"SNV","C","G","Homozygous",20,20,100,1,16,9,0.36,37.45,25,25,10,15,null,1,1,"no","G/G","No",1,80.88,"XP_008190286.1:c.[211+8213G>C]; XP_015840713.1:c.[196+8213G>C]; XP_976415.1:c.[351G>C]; XP_015840711.1:c.[253+8213G>C]","XP_976415.1:p.Glu117Asp","LOC661960, LOC662180","661960 , 662180",null,"661960 [Gene Symbol: LOC661960] [Locus Tag: TcasGA2_TC000286] [Chromosome: LG2] [Map Location: ] [Description: Kv channel-interacting protein 1] [Gene Type: protein-coding] || 662180 [Gene Symbol: LOC662180] [Locus Tag: TcasGA2_TC000287] [Chromosome: LG2] [Map Location: ] [Description: uncharacterized LOC662180] [Gene Type: protein-coding]","LOC661960; TcasGA2_TC000286 || TcasGA2_TC000287; LOC662180"]
[164,"NC_007417.3",14500054,"SNV","T","C","Heterozygous",16,28,57.14,1,5,15,0.25,37.94,20,37,7,7,2.67,0.28,0.8,"no","C/T","No",1,88.07,"XP_008190436.1:c.[1441A>G]; XP_008190435.1:c.[1441A>G]","XP_008190436.1:p.[Ile481Val]; XP_008190435.1:p.[Ile481Val]","LOC660159",660159,null,"660159 [Gene Symbol: LOC660159] [Locus Tag: TcasGA2_TC000221] [Chromosome: LG2] [Map Location: ] [Description: cadherin 23] [Gene Type: protein-coding]","LOC660159; TcasGA2_TC000221"]
[165,"NC_007417.3",14699311,"SNV","C","T","Homozygous",26,26,100,1,23,19,0.45,38.12,42,42,17,13,null,1,1,"no","T/T","No",1,97.56,"XP_008190450.1:c.1975G>A","XP_008190450.1:p.Asp659Asn","LOC661251",661251,null,"661251 [Gene Symbol: LOC661251] [Locus Tag: TcasGA2_TC000208] [Chromosome: LG2] [Map Location: ] [Description: putative helicase mov-10-B.1] [Gene Type: protein-coding]","TcasGA2_TC000208; LOC661251"]
[166,"NC_007418.3",527645,"SNV","C","T","Homozygous",22,22,100,1,15,11,0.42,36.09,26,26,11,20,null,1,1,"no","T/T","No",1,88.54,"XP_975869.2:c.82C>T","XP_975869.2:p.Pro28Ser","LOC660693",660693,null,"660693 [Gene Symbol: LOC660693] [Locus Tag: TcasGA2_TC032293] [Chromosome: LG3] [Map Location: ] [Description: RING finger and SPRY domain-containing protein 1] [Gene Type: protein-coding]","LOC660693; TcasGA2_TC032293"]
[167,"NC_007418.3",582862,"SNV","T","C","Homozygous",20,20,100,1,10,13,0.43,35.65,23,23,7,11,null,1,1,"no","C/C","No",1,80.87,"XP_015832997.1:c.[277A>G]; XP_015832996.1:c.[277A>G]","XP_015832997.1:p.[Thr93Ala]; XP_015832996.1:p.[Thr93Ala]","LOC662250",662250,null,"662250 [Gene Symbol: LOC662250] [Locus Tag: TcasGA2_TC003184] [Chromosome: LG3] [Map Location: ] [Description: dosage compensation regulator] [Gene Type: protein-coding]","TcasGA2_TC003184; LOC662250"]
[168,"NC_007418.3",597416,"SNV","G","A","Homozygous",25,25,100,1,12,18,0.4,37.84,30,30,11,13,null,1,1,"no","A/A","No",1,97.54,"XP_008190624.1:c.878C>T","XP_008190624.1:p.Pro293Leu","LOC662365",662365,null,"662365 [Gene Symbol: LOC662365] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC662365] [Gene Type: protein-coding]","LOC662365"]
[169,"NC_007418.3",618085,"SNV","G","C","Homozygous",22,22,100,1,8,14,0.36,37.86,22,22,6,11,null,1,1,"no","C/C","No",1,86.9,"XP_008190571.1:c.1768G>C","XP_008190571.1:p.Glu590Gln","LOC103312221",103312221,null,"103312221 [Gene Symbol: LOC103312221] [Locus Tag: TcasGA2_TC003272] [Chromosome: LG3] [Map Location: ] [Description: valine--tRNA ligase] [Gene Type: protein-coding]","LOC103312221; TcasGA2_TC003272"]
[171,"NC_007418.3",1255402,"SNV","G","T","Homozygous",28,28,100,1,6,25,0.19,38.89,31,31,10,13,null,1,1,"no","T/T","No",1,106.59,"XP_015833125.1:c.[5684C>A]; XP_015833123.1:c.[5828C>A]; XP_015833126.1:c.[5573C>A]; XP_015833124.1:c.[5765C>A]","XP_015833125.1:p.[Thr1895Lys]; XP_015833123.1:p.[Thr1943Lys]; XP_015833126.1:p.[Thr1858Lys]; XP_015833124.1:p.[Thr1922Lys]","LOC103312261",103312261,null,"103312261 [Gene Symbol: LOC103312261] [Locus Tag: TcasGA2_TC003135] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: uncharacterized LOC103312261] [Gene Type: protein-coding]","TcasGA2_TC003135; LOC103312261"]
[173,"NC_007418.3",1420991,"SNV","C","A","Heterozygous",8,20,40,1,0,8,0,39.5,8,23,3,4,0.93,0.49,0.44,"no","A/C","No",1,54.63,"XP_970233.1:c.319C>A","XP_970233.1:p.Gln107Lys","LOC658780",658780,null,"658780 [Gene Symbol: LOC658780] [Locus Tag: TcasGA2_TC003334] [Chromosome: LG3] [Map Location: ] [Description: mediator of RNA polymerase II transcription subunit 23] [Gene Type: protein-coding]","LOC658780; TcasGA2_TC003334"]
[177,"NC_007418.3",3726785,"SNV","G","A","Homozygous",22,22,100,1,5,22,0.19,38.09,27,27,8,12,null,1,1,"no","A/A","No",1,88.5,"XP_015833131.1:c.[1191G>A]; XP_015833130.1:c.[1191G>A]; XP_970090.1:c.[1191G>A]","XP_015833131.1:p.[Met397Ile]; XP_015833130.1:p.[Met397Ile]; XP_970090.1:p.[Met397Ile]","LOC658622",658622,null,"658622 [Gene Symbol: LOC658622] [Locus Tag: TcasGA2_TC011542] [Chromosome: LG3] [Map Location: ] [Description: ATM interactor] [Gene Type: protein-coding]","LOC658622; TcasGA2_TC011542"]
[178,"NC_007418.3",3729755,"SNV","A","G","Heterozygous",12,25,48,1,7,5,0.42,39.25,12,28,4,7,-0.35,0.14,0.58,"no","A/G","No",1,97.69,"NP_001107842.1:c.[262T>C]; XP_008200273.1:c.[262T>C]","NP_001107842.1:p.[Phe88Leu]; XP_008200273.1:p.[Phe88Leu]","Ago-2a",658698,"Argonaute-2a","658698 [Gene Symbol: Ago-2a] [Locus Tag: TcasGA2_TC011525] [Chromosome: LG3] [Map Location: ] [Description: Argonaute-2a] [Gene Type: protein-coding]","TcasGA2_TC011525; Ago-2a; Ago2A"]
[179,"NC_007418.3",3752992,"SNV","T","G","Homozygous",25,25,100,1,10,17,0.37,35.2,27,27,12,9,null,1,1,"no","G/G","No",1,95.92,"XP_008200287.1:c.391A>C","XP_008200287.1:p.Asn131His","LOC658978",658978,null,"658978 [Gene Symbol: LOC658978] [Locus Tag: TcasGA2_TC011521] [Chromosome: LG3] [Map Location: ] [Description: IQ and AAA domain-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC011521; LOC658978"]
[180,"NC_007418.3",4101469,"SNV","G","T","Homozygous",31,31,100,1,21,16,0.43,38.71,37,37,17,17,null,1,1,"no","T/T","No",1,112.61,"XP_015833062.1:c.306C>A","XP_015833062.1:p.His102Gln","LOC658110",658110,null,"658110 [Gene Symbol: LOC658110] [Locus Tag: TcasGA2_TC003383] [Chromosome: LG3] [Map Location: ] [Description: cuticle protein 16.5, isoform B] [Gene Type: protein-coding]","Nplp4; TcasGA2_TC003383; LOC658110"]
[182,"NC_007418.3",4174140,"Deletion","T","-","Heterozygous",15,28,53.57,1,7,11,0.39,39.13,18,31,6,8,3.62,0.11,0.92,"no","-/T","Yes",3,100.61,"XP_008193791.1:c.1271delT","XP_008193791.1:p.Ser425fs","LOC657154",657154,null,"657154 [Gene Symbol: LOC657154] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: ice-structuring glycoprotein] [Gene Type: protein-coding]","LOC657154"]
[185,"NC_007418.3","4256657..4256658","MNV","TG","CT","Heterozygous",21,32,65.62,1,21,5,0.19,38.14,26,37,10,15,-3.19,0.97,1,"no","complex","No",1,200,"XP_008190814.1:c.425_426delCAinsAG","XP_008190814.1:p.Thr142Lys","LOC103312292",103312292,null,"103312292 [Gene Symbol: LOC103312292] [Locus Tag: TcasGA2_TC003023] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312292] [Gene Type: protein-coding]","LOC103312292; TcasGA2_TC003023"]
[186,"NC_007418.3",4256688,"SNV","G","A","Heterozygous",15,24,62.5,1,14,4,0.22,37.47,18,29,9,8,1.73,0.94,0.98,"no","A/G","No",1,65.28,"XP_008190814.1:c.395C>T","XP_008190814.1:p.Ala132Val","LOC103312292",103312292,null,"103312292 [Gene Symbol: LOC103312292] [Locus Tag: TcasGA2_TC003023] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312292] [Gene Type: protein-coding]","LOC103312292; TcasGA2_TC003023"]
[187,"NC_007418.3",4775407,"SNV","G","A","Homozygous",26,26,100,1,5,23,0.18,38.65,28,28,9,11,null,1,1,"no","A/A","No",1,100.54,"XP_001812254.1:c.956C>T","XP_001812254.1:p.Thr319Ile","LOC656905",656905,null,"656905 [Gene Symbol: LOC656905] [Locus Tag: TcasGA2_TC003007] [Chromosome: LG3] [Map Location: ] [Description: SRSF protein kinase 1] [Gene Type: protein-coding]","TcasGA2_TC003007; LOC656905"]
[188,"NC_007418.3",4790033,"SNV","C","G","Homozygous",34,34,100,1,9,27,0.25,39.12,36,36,13,18,null,1,1,"no","G/G","No",1,123.01,"XP_008190864.1:c.1935G>C","XP_008190864.1:p.Leu645Phe","LOC657637",657637,null,"657637 [Gene Symbol: LOC657637] [Locus Tag: TcasGA2_TC003006] [Chromosome: LG3] [Map Location: ] [Description: lisH domain and HEAT repeat-containing protein KIAA1468 homolog] [Gene Type: protein-coding]","TcasGA2_TC003006; LOC657637"]
[191,"NC_007418.3",5251353,"SNV","A","G","Homozygous",21,21,100,1,10,20,0.33,35.81,30,30,9,8,null,1,1,"no","G/G","No",1,83.89,"XP_972061.1:c.1207A>G","XP_972061.1:p.Thr403Ala","LOC660762",660762,null,"660762 [Gene Symbol: LOC660762] [Locus Tag: TcasGA2_TC003450] [Chromosome: LG3] [Map Location: ] [Description: putative serine protease K12H4.7] [Gene Type: protein-coding]","TcasGA2_TC003450; LOC660762"]
[193,"NC_007418.3",5486826,"SNV","T","C","Homozygous",28,28,100,1,25,3,0.11,38.96,28,28,8,16,null,1,1,"no","C/C","No",1,104.96,"XP_015833393.1:c.[2177A>G]; XP_008190908.1:c.[2288A>G]; XP_008190906.1:c.[2420A>G]; XP_008190907.1:c.[2288A>G]; XP_973061.2:c.[2456A>G]","XP_015833393.1:p.[Asn726Ser]; XP_008190908.1:p.[Asn763Ser]; XP_008190906.1:p.[Asn807Ser]; XP_008190907.1:p.[Asn763Ser]; XP_973061.2:p.[Asn819Ser]","LOC661834",661834,null,"661834 [Gene Symbol: LOC661834] [Locus Tag: TcasGA2_TC002976] [Chromosome: LG3] [Map Location: ] [Description: MKL/myocardin-like protein 2] [Gene Type: protein-coding]","TcasGA2_TC002976; LOC661834"]
[196,"NC_007418.3",5726770,"SNV","G","A","Homozygous",20,20,100,1,5,15,0.25,36.8,20,20,6,12,null,1,1,"no","A/A","No",1,82.49,"XP_015833269.1:c.[30874C>T]; XP_015833268.1:c.[30937C>T]; XP_015833270.1:c.[30937C>T]","XP_015833269.1:p.[Pro10292Ser]; XP_015833268.1:p.[Pro10313Ser]; XP_015833270.1:p.[Pro10313Ser]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[197,"NC_007418.3",5737297,"SNV","T","C","Homozygous",20,20,100,1,20,4,0.17,36.6,24,24,9,10,null,1,1,"no","C/C","No",1,80.88,"XP_015833269.1:c.[27778A>G]; XP_015833268.1:c.[27841A>G]; XP_015833270.1:c.[27841A>G]","XP_015833269.1:p.[Ile9260Val]; XP_015833268.1:p.[Ile9281Val]; XP_015833270.1:p.[Ile9281Val]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[198,"NC_007418.3",5742058,"SNV","G","T","Homozygous",21,21,100,1,7,14,0.33,38.81,21,21,5,7,null,1,1,"no","T/T","No",1,85.53,"XP_015833269.1:c.[23017C>A]; XP_015833270.1:c.[23080C>A]; XP_015833268.1:c.[23080C>A]","XP_015833269.1:p.[Leu7673Met]; XP_015833270.1:p.[Leu7694Met]; XP_015833268.1:p.[Leu7694Met]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[199,"NC_007418.3",5742063,"SNV","G","A","Homozygous",21,21,100,1,7,14,0.33,39.86,21,21,5,7,null,1,1,"no","A/A","No",1,85.49,"XP_015833269.1:c.[23012C>T]; XP_015833270.1:c.[23075C>T]; XP_015833268.1:c.[23075C>T]","XP_015833269.1:p.[Pro7671Leu]; XP_015833270.1:p.[Pro7692Leu]; XP_015833268.1:p.[Pro7692Leu]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[200,"NC_007418.3",5742066,"SNV","T","G","Homozygous",21,21,100,1,7,14,0.33,39.24,21,21,5,7,null,1,1,"no","G/G","No",1,83.89,"XP_015833268.1:c.[23072A>C]; XP_015833270.1:c.[23072A>C]; XP_015833269.1:c.[23009A>C]","XP_015833268.1:p.[Lys7691Thr]; XP_015833270.1:p.[Lys7691Thr]; XP_015833269.1:p.[Lys7670Thr]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[201,"NC_007418.3",5746245,"SNV","A","G","Homozygous",22,22,100,1,3,19,0.14,36.14,22,22,13,11,null,1,1,"no","G/G","No",1,86.89,"XP_015833269.1:c.[18830T>C]; XP_015833268.1:c.[18893T>C]; XP_015833270.1:c.[18893T>C]","XP_015833269.1:p.[Leu6277Pro]; XP_015833268.1:p.[Leu6298Pro]; XP_015833270.1:p.[Leu6298Pro]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[202,"NC_007418.3",5748138,"SNV","A","G","Homozygous",21,21,100,1,21,0,0,38.33,21,21,5,16,null,1,1,"no","G/G","No",1,83.89,"XP_015833270.1:c.[17000T>C]; XP_015833268.1:c.[17000T>C]; XP_015833269.1:c.[16937T>C]","XP_015833270.1:p.[Val5667Ala]; XP_015833268.1:p.[Val5667Ala]; XP_015833269.1:p.[Val5646Ala]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[203,"NC_007418.3",5760687,"SNV","G","A","Homozygous",20,20,100,1,12,10,0.45,39.15,22,22,9,14,null,1,1,"no","A/A","No",1,82.49,"XP_015833268.1:c.[4451C>T]; XP_015833270.1:c.[4451C>T]; XP_015833269.1:c.[4388C>T]","XP_015833268.1:p.[Thr1484Met]; XP_015833270.1:p.[Thr1484Met]; XP_015833269.1:p.[Thr1463Met]","LOC662729",662729,null,"662729 [Gene Symbol: LOC662729] [Locus Tag: TcasGA2_TC002962] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC662729; TcasGA2_TC002962"]
[204,"NC_007418.3",5923125,"SNV","T","C","Homozygous",22,22,100,1,7,15,0.32,36.18,22,22,9,12,null,1,1,"no","C/C","No",1,86.89,"XP_008190954.1:c.[1918A>G]; XP_015833276.1:c.[2029A>G]","XP_008190954.1:p.[Ile640Val]; XP_015833276.1:p.[Ile677Val]","LOC100141894",100141894,null,"100141894 [Gene Symbol: LOC100141894] [Locus Tag: TcasGA2_TC002945] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100141894; TcasGA2_TC002945"]
[206,"NC_007418.3",5981252,"SNV","G","C","Homozygous",20,20,100,1,8,15,0.35,38,23,23,8,14,null,1,1,"no","C/C","No",1,80.88,"XP_974711.1:c.[716C>G]; XP_008190957.1:c.[716C>G]","XP_974711.1:p.[Thr239Ser]; XP_008190957.1:p.[Thr239Ser]","LOC663579",663579,null,"663579 [Gene Symbol: LOC663579] [Locus Tag: TcasGA2_TC002941] [Chromosome: LG3] [Map Location: ] [Description: zinc transporter ZIP1] [Gene Type: protein-coding]","LOC663579; TcasGA2_TC002941"]
[207,"NC_007418.3",6036712,"SNV","G","A","Homozygous",21,21,100,1,10,14,0.42,37.38,24,24,9,13,null,1,1,"no","A/A","No",1,85.5,"XP_008190963.1:c.[5467G>A]; XP_008190964.1:c.[5467G>A]","XP_008190963.1:p.[Ala1823Thr]; XP_008190964.1:p.[Ala1823Thr]","LOC663739",663739,null,"663739 [Gene Symbol: LOC663739] [Locus Tag: TcasGA2_TC003500] [Chromosome: LG3] [Map Location: ] [Description: CCR4-NOT transcription complex subunit 1] [Gene Type: protein-coding]","LOC663739; CNOT1; TcasGA2_TC003500"]
[208,"NC_007418.3",6060327,"SNV","G","T","Homozygous",28,28,100,1,19,9,0.32,35.82,28,28,12,16,null,1,1,"no","T/T","No",1,106.6,"XP_008190971.1:c.62G>T","XP_008190971.1:p.Arg21Leu","LOC103312340",103312340,null,"103312340 [Gene Symbol: LOC103312340] [Locus Tag: TcasGA2_TC003503] [Chromosome: LG3] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312340; TcasGA2_TC003503"]
[209,"NC_007418.3",6212452,"SNV","G","A","Homozygous",21,21,100,1,17,9,0.35,37.86,26,26,9,9,null,1,1,"no","A/A","No",1,85.5,"XP_015833312.1:c.[19G>A]; XP_975119.2:c.[22-268G>A]; XP_015833311.1:c.[19G>A]","XP_015833312.1:p.[Asp7Asn]; XP_015833311.1:p.[Asp7Asn]","LOC664002",664002,null,"664002 [Gene Symbol: LOC664002] [Locus Tag: TcasGA2_TC003518] [Chromosome: LG3] [Map Location: ] [Description: dual specificity protein phosphatase 22] [Gene Type: protein-coding]","LOC664002; TcasGA2_TC003518"]
[210,"NC_007418.3",6642860,"SNV","A","G","Homozygous",25,25,100,1,6,20,0.23,38.28,26,26,8,14,null,1,1,"no","G/G","No",1,95.93,"XP_015833348.1:c.347A>G","XP_015833348.1:p.Gln116Arg","LOC107397511",107397511,null,"107397511 [Gene Symbol: LOC107397511] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: supervillin] [Gene Type: protein-coding]","LOC107397511"]
[211,"NC_007418.3",6643225,"SNV","C","T","Homozygous",22,22,100,1,15,12,0.44,35.77,27,27,6,18,null,1,1,"no","T/T","No",1,88.54,"XP_015833348.1:c.712C>T","XP_015833348.1:p.Leu238Phe","LOC107397511",107397511,null,"107397511 [Gene Symbol: LOC107397511] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: supervillin] [Gene Type: protein-coding]","LOC107397511"]
[212,"NC_007418.3",7129598,"SNV","G","A","Homozygous",20,20,100,1,12,16,0.43,38.95,28,28,7,13,null,1,1,"no","A/A","No",1,82.49,"XP_008191036.1:c.[502-8841G>A]; XP_975456.1:c.[55C>T]; XP_008191037.1:c.[502-8841G>A]","XP_975456.1:p.Pro19Ser","LOC664359, LOC664352","664359 , 664352",null,"664359 [Gene Symbol: LOC664359] [Locus Tag: TcasGA2_TC003550] [Chromosome: LG3] [Map Location: ] [Description: sestrin homolog] [Gene Type: protein-coding] || 664352 [Gene Symbol: LOC664352] [Locus Tag: TcasGA2_TC002890] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC664352] [Gene Type: protein-coding]","LOC664359; TcasGA2_TC003550 || TcasGA2_TC002890; LOC664352"]
[213,"NC_007418.3","7547458..7547459","MNV","TC","CT","Homozygous",21,21,100,1,17,14,0.45,37.43,31,31,11,16,null,1,1,"no","CT/CT","No",1,200,"XP_001808147.1:c.1017_1018delGAinsAG","XP_001808147.1:p.Lys340Glu","LOC100142009",100142009,null,"100142009 [Gene Symbol: LOC100142009] [Locus Tag: TcasGA2_TC002880] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC100142009] [Gene Type: protein-coding]","LOC100142009; TcasGA2_TC002880"]
[214,"NC_007418.3",7599605,"SNV","T","C","Homozygous",22,22,100,1,16,12,0.43,35.45,28,28,8,15,null,1,1,"no","C/C","No",1,86.9,"XP_967495.1:c.3085A>G","XP_967495.1:p.Thr1029Ala","LOC655839",655839,null,"655839 [Gene Symbol: LOC655839] [Locus Tag: TcasGA2_TC002876] [Chromosome: LG3] [Map Location: ] [Description: HEAT repeat-containing protein 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC002876; LOC655839"]
[218,"NC_007418.3",8624267,"SNV","G","A","Homozygous",26,26,100,1,11,19,0.37,38.19,30,30,11,16,null,1,1,"no","A/A","No",1,100.54,"XP_015833263.1:c.4334G>A","XP_015833263.1:p.Ser1445Asn","LOC103312614",103312614,null,"103312614 [Gene Symbol: LOC103312614] [Locus Tag: TcasGA2_TC030638] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312614] [Gene Type: protein-coding]","TcasGA2_TC030638; LOC103312614"]
[219,"NC_007418.3",8693275,"SNV","G","A","Homozygous",20,20,100,1,13,8,0.38,37.45,21,21,6,14,null,1,1,"no","A/A","No",1,82.49,"XP_970579.3:c.158G>A","XP_970579.3:p.Arg53Lys","LOC659159",659159,null,"659159 [Gene Symbol: LOC659159] [Locus Tag: TcasGA2_TC003601] [Chromosome: LG3] [Map Location: ] [Description: cx9C motif-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC003601; LOC659159"]
[220,"NC_007418.3",8694452,"SNV","G","A","Homozygous",20,20,100,1,13,10,0.43,37.7,23,23,7,14,null,1,1,"no","A/A","No",1,82.49,"XP_008191963.1:c.749G>A","XP_008191963.1:p.Arg250Lys","LOC659232",659232,null,"659232 [Gene Symbol: LOC659232] [Locus Tag: TcasGA2_TC003602] [Chromosome: LG3] [Map Location: ] [Description: GPI mannosyltransferase 1] [Gene Type: protein-coding]","LOC659232; TcasGA2_TC003602"]
[221,"NC_007418.3",8795193,"SNV","T","A","Homozygous",25,25,100,1,3,22,0.12,38.68,25,25,7,16,null,1,1,"no","A/A","No",1,97.53,"XP_008191643.1:c.173A>T","XP_008191643.1:p.His58Leu","LOC659306",659306,null,"659306 [Gene Symbol: LOC659306] [Locus Tag: TcasGA2_TC002829] [Chromosome: LG3] [Map Location: ] [Description: glycine-rich cell wall structural protein] [Gene Type: protein-coding]","TcasGA2_TC002829; LOC659306"]
[222,"NC_007418.3",8806682,"Deletion","A","-","Homozygous",22,22,100,1,8,15,0.35,37.68,23,23,10,15,null,1,1,"no","-/-","No",1,97.95,"XP_008191645.2:c.2246delT","XP_008191645.2:p.Leu749fs","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[223,"NC_007418.3",8807527,"SNV","T","G","Homozygous",22,22,100,1,11,20,0.35,36.77,31,31,9,9,null,1,1,"no","G/G","No",1,86.9,"XP_008191645.2:c.1401A>C","XP_008191645.2:p.Gln467His","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[224,"NC_007418.3",8807549,"SNV","A","G","Homozygous",24,24,100,1,12,20,0.38,37.92,32,32,9,11,null,1,1,"no","G/G","No",1,92.92,"XP_008191645.2:c.1379T>C","XP_008191645.2:p.Phe460Ser","LOC103312116",103312116,null,"103312116 [Gene Symbol: LOC103312116] [Locus Tag: TcasGA2_TC002826] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312116] [Gene Type: protein-coding]","TcasGA2_TC002826; LOC103312116"]
[228,"NC_007418.3",9639417,"SNV","C","T","Homozygous",23,23,100,1,21,2,0.09,37.83,23,23,9,17,null,1,1,"no","T/T","No",1,91.55,"XP_008192372.1:c.[2674G>A]; XP_015833405.1:c.[2674G>A]; XP_015833406.1:c.[2071G>A]; XP_008192366.1:c.[2674G>A]","XP_008192372.1:p.[Val892Ile]; XP_015833405.1:p.[Val892Ile]; XP_015833406.1:p.[Val691Ile]; XP_008192366.1:p.[Val892Ile]","LOC659912",659912,null,"659912 [Gene Symbol: LOC659912] [Locus Tag: TcasGA2_TC002804] [Chromosome: LG3] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","LOC659912; TcasGA2_TC002804"]
[229,"NC_007418.3",9639420,"SNV","C","T","Homozygous",21,21,100,1,19,2,0.1,38.62,21,21,8,15,null,1,1,"no","T/T","No",1,85.52,"XP_015833405.1:c.[2671G>A]; XP_008192372.1:c.[2671G>A]; XP_015833406.1:c.[2068G>A]; XP_008192366.1:c.[2671G>A]","XP_015833405.1:p.[Gly891Arg]; XP_008192372.1:p.[Gly891Arg]; XP_015833406.1:p.[Gly690Arg]; XP_008192366.1:p.[Gly891Arg]","LOC659912",659912,null,"659912 [Gene Symbol: LOC659912] [Locus Tag: TcasGA2_TC002804] [Chromosome: LG3] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","LOC659912; TcasGA2_TC002804"]
[230,"NC_007418.3",9639513,"SNV","C","T","Homozygous",20,20,100,1,1,19,0.05,38.45,20,20,8,12,null,1,1,"no","T/T","No",1,82.52,"XP_015833405.1:c.[2578G>A]; XP_008192366.1:c.[2578G>A]; XP_008192372.1:c.[2578G>A]; XP_015833406.1:c.[1975G>A]","XP_015833405.1:p.[Ala860Thr]; XP_008192366.1:p.[Ala860Thr]; XP_008192372.1:p.[Ala860Thr]; XP_015833406.1:p.[Ala659Thr]","LOC659912",659912,null,"659912 [Gene Symbol: LOC659912] [Locus Tag: TcasGA2_TC002804] [Chromosome: LG3] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","LOC659912; TcasGA2_TC002804"]
[231,"NC_007418.3",10656717,"SNV","C","T","Homozygous",20,20,100,1,5,19,0.21,37.1,24,24,9,10,null,1,1,"no","T/T","No",1,82.52,"XP_015833472.1:c.[2993G>A]; XP_008199582.1:c.[3002G>A]","XP_015833472.1:p.[Ser998Asn]; XP_008199582.1:p.[Ser1001Asn]","LOC661398",661398,null,"661398 [Gene Symbol: LOC661398] [Locus Tag: TcasGA2_TC000140] [Chromosome: LG3] [Map Location: ] [Description: DNA replication ATP-dependent helicase/nuclease DNA2] [Gene Type: protein-coding]","LOC661398; TcasGA2_TC000140"]
[232,"NC_007418.3","10700243..10700244","MNV","TG","CA","Homozygous",20,20,100,1,13,9,0.41,37.48,22,22,9,10,null,1,1,"no","CA/CA","No",1,200,"XP_972502.1:c.882_883delCAinsTG","XP_972502.1:p.Ile295Val","LOC661234",661234,null,"661234 [Gene Symbol: LOC661234] [Locus Tag: TcasGA2_TC000138] [Chromosome: LG3] [Map Location: ] [Description: lysine-specific demethylase 8] [Gene Type: protein-coding]","TcasGA2_TC000138; LOC661234"]
[233,"NC_007418.3",10707760,"SNV","A","G","Homozygous",20,20,100,1,9,11,0.45,39.5,20,20,12,13,null,1,1,"no","G/G","No",1,80.88,"XP_972452.1:c.1987A>G","XP_972452.1:p.Thr663Ala","LOC661180",661180,null,"661180 [Gene Symbol: LOC661180] [Locus Tag: TcasGA2_TC000042] [Chromosome: LG3] [Map Location: ] [Description: probable glutamine--tRNA ligase] [Gene Type: protein-coding]","LOC661180; TcasGA2_TC000042"]
[234,"NC_007418.3","10723547..10723549","Deletion","ATC","-","Homozygous",21,21,100,1,11,10,0.48,35.9,21,21,4,8,null,1,1,"no","-/-","No",1,200,"XP_972197.1:c.296_298delATC","XP_972197.1:p.His102del","LOC660907",660907,null,"660907 [Gene Symbol: LOC660907] [Locus Tag: TcasGA2_TC000045] [Chromosome: LG3] [Map Location: ] [Description: ubiquitin-specific protease] [Gene Type: protein-coding]","LOC660907; TcasGA2_TC000045"]
[235,"NC_007418.3",10728470,"SNV","A","C","Homozygous",26,26,100,1,22,4,0.15,39.5,26,26,7,14,null,1,1,"no","C/C","No",1,98.94,"XP_972197.1:c.1222A>C","XP_972197.1:p.Thr408Pro","LOC660907",660907,null,"660907 [Gene Symbol: LOC660907] [Locus Tag: TcasGA2_TC000045] [Chromosome: LG3] [Map Location: ] [Description: ubiquitin-specific protease] [Gene Type: protein-coding]","LOC660907; TcasGA2_TC000045"]
[236,"NC_007418.3",10854345,"SNV","G","A","Homozygous",23,23,100,1,9,18,0.33,38.48,27,27,10,10,null,1,1,"no","A/A","No",1,91.51,"XP_970625.1:c.598G>A","XP_970625.1:p.Ala200Thr","LOC659205",659205,null,"659205 [Gene Symbol: LOC659205] [Locus Tag: TcasGA2_TC000060] [Chromosome: LG3] [Map Location: ] [Description: tRNA dimethylallyltransferase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC000060; LOC659205"]
[238,"NC_007418.3",11598779,"SNV","T","C","Homozygous",36,36,100,1,26,10,0.28,38.64,36,36,10,18,null,1,1,"no","C/C","No",1,129.02,"XP_008191098.2:c.293T>C","XP_008191098.2:p.Leu98Pro","LOC103312381",103312381,null,"103312381 [Gene Symbol: LOC103312381] [Locus Tag: TcasGA2_TC003651] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312381] [Gene Type: protein-coding]","TcasGA2_TC003651; LOC103312381"]
[240,"NC_007418.3",12946261,"SNV","G","A","Homozygous",20,20,100,1,15,8,0.35,38.6,23,23,8,15,null,1,1,"no","A/A","No",1,82.49,"XP_015833616.1:c.759G>A","XP_015833616.1:p.Met253Ile","LOC107397550",107397550,null,"107397550 [Gene Symbol: LOC107397550] [Locus Tag: TcasGA2_TC032489] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397550] [Gene Type: protein-coding]","TcasGA2_TC032489; LOC107397550"]
[242,"NC_007418.3","14122236..14122237","MNV","GG","AA","Heterozygous",11,26,42.31,1,7,6,0.46,39.5,13,34,7,7,1.19,0.42,0.98,"no","complex","No",1,200,"XP_015833636.1:c.274_275delGGinsAA","XP_015833636.1:p.Gly92Asn","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[243,"NC_007418.3",14122260,"SNV","A","G","Heterozygous",11,32,34.38,1,11,4,0.27,38.09,15,39,5,7,-0.3,0.52,0.97,"no","A/G","No",1,55.77,"XP_015833636.1:c.298A>G","XP_015833636.1:p.Arg100Gly","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[245,"NC_007418.3",14122272,"SNV","C","T","Heterozygous",13,33,39.39,1,13,4,0.24,37.38,17,40,9,9,-0.83,0.52,0.77,"no","C/T","No",1,86.71,"XP_015833636.1:c.310C>T","XP_015833636.1:p.Arg104Cys","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[246,"NC_007418.3","14122290..14122291","MNV","GG","AA","Heterozygous",8,38,21.05,1,4,7,0.36,40.12,11,49,5,5,3.75,0.31,0.47,"yes","complex","No",1,200,"XP_015833636.1:c.328_329delGGinsAA","XP_015833636.1:p.Gly110Asn","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[247,"NC_007418.3",14122291,"SNV","G","A","Heterozygous",12,37,32.43,1,7,5,0.42,38.83,12,46,7,8,2.61,0.62,1,"yes","complex","No",1,200,"XP_015833636.1:c.329G>A","XP_015833636.1:p.Gly110Asp","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[249,"NC_007418.3",14122351,"SNV","C","A","Heterozygous",10,20,50,1,7,3,0.3,38.2,10,20,6,6,-1.4,0.21,0.58,"no","A/C","No",1,79.53,"XP_015833636.1:c.389C>A","XP_015833636.1:p.Thr130Lys","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[250,"NC_007418.3",14122398,"SNV","A","G","Heterozygous",13,21,61.9,1,6,7,0.46,37.85,13,21,6,6,0.07,0.89,1,"no","A/G","No",1,56.43,"XP_015833636.1:c.436A>G","XP_015833636.1:p.Lys146Glu","LOC657090, LOC103312177","657090 , 103312177",null,"657090 [Gene Symbol: LOC657090] [Locus Tag: TcasGA2_TC032499] [Chromosome: LG3] [Map Location: ] [Description: solute carrier family 25 member 35] [Gene Type: protein-coding] || 103312177 [Gene Symbol: LOC103312177] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC657090; TcasGA2_TC032499 || LOC103312177"]
[253,"NC_007418.3",14372125,"SNV","G","C","Homozygous",22,22,100,1,14,10,0.42,37.68,24,24,10,17,null,1,1,"no","C/C","No",1,86.9,"XP_015833657.1:c.301G>C","XP_015833657.1:p.Val101Leu","LOC658029",658029,null,"658029 [Gene Symbol: LOC658029] [Locus Tag: TcasGA2_TC032509] [Chromosome: LG3] [Map Location: ] [Description: cytochrome P450 6k1] [Gene Type: protein-coding]","LOC658029; CYP345D2; TcasGA2_TC032509"]
[254,"NC_007418.3",14372338,"SNV","A","C","Homozygous",23,23,100,1,7,19,0.27,38.65,26,26,12,10,null,1,1,"no","C/C","No",1,89.91,"XP_015833657.1:c.514A>C","XP_015833657.1:p.Lys172Gln","LOC658029",658029,null,"658029 [Gene Symbol: LOC658029] [Locus Tag: TcasGA2_TC032509] [Chromosome: LG3] [Map Location: ] [Description: cytochrome P450 6k1] [Gene Type: protein-coding]","LOC658029; CYP345D2; TcasGA2_TC032509"]
[256,"NC_007418.3",14438535,"SNV","A","G","Homozygous",25,25,100,1,14,11,0.44,38.28,25,25,8,15,null,1,1,"no","G/G","No",1,95.93,"XP_008199223.2:c.650A>G","XP_008199223.2:p.Gln217Arg","LOC100141710",100141710,null,"100141710 [Gene Symbol: LOC100141710] [Locus Tag: TcasGA2_TC010526] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: coiled-coil and C2 domain-containing protein 2A] [Gene Type: protein-coding]","TcasGA2_TC010526; LOC100141710"]
[258,"NC_007418.3",15070095,"Deletion","C","-","Heterozygous",7,28,25,1,6,1,0.14,35.71,7,28,3,6,null,0.21,0.41,"no","complex","Yes",10,200,"XP_008199243.1:c.[1715-7274delC]; XP_015833666.1:c.[921delG]; XP_008199246.1:c.[1715-7274delC]; XP_015833665.1:c.[152-7274delC]; XP_008199244.1:c.[1715-7274delC]; XP_008199242.1:c.[1715-7274delC]; XP_008199245.1:c.[86-7274delC]; XP_008199239.2:c.[855delG]; XP_015833667.1:c.[921delG]; XP_008199240.1:c.[1715-7274delC]; XP_008199241.1:c.[1715-7274delC]; XP_008199236.2:c.[921delG]; XP_015833669.1:c.[921delG]; XP_015833670.1:c.[921delG]","XP_015833666.1:p.[*308fs]; XP_008199239.2:p.[*286fs]; XP_015833667.1:p.[*308fs]; XP_008199236.2:p.[*308fs]; XP_015833669.1:p.[*308fs]; XP_015833670.1:p.[*308fs]","LOC657292, LOC103314596","657292 , 103314596",null,"657292 [Gene Symbol: LOC657292] [Locus Tag: TcasGA2_TC010542] [Chromosome: LG3] [Map Location: ] [Description: disco-interacting protein 2] [Gene Type: protein-coding] || 103314596 [Gene Symbol: LOC103314596] [Locus Tag: TcasGA2_TC010509] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103314596] [Gene Type: protein-coding]","LOC657292; TcasGA2_TC010542 || LOC103314596; TcasGA2_TC010509"]
[265,"NC_007418.3",16679272,"SNV","G","A","Heterozygous",21,32,65.62,1,9,12,0.43,38.1,21,35,7,12,0.97,0.57,1,"no","A/G","No",1,65.74,"XP_008191268.1:c.777G>A","XP_008191268.1:p.Met259Ile","LOC659974",659974,null,"659974 [Gene Symbol: LOC659974] [Locus Tag: TcasGA2_TC002647] [Chromosome: LG3] [Map Location: ] [Description: peroxisome assembly factor 2] [Gene Type: protein-coding]","TcasGA2_TC002647; LOC659974"]
[267,"NC_007418.3",16688911,"SNV","C","A","Homozygous",20,20,100,1,17,8,0.32,38.75,25,25,9,14,null,1,1,"no","A/A","No",1,82.49,"XP_008191268.1:c.1361C>A","XP_008191268.1:p.Ala454Glu","LOC659974",659974,null,"659974 [Gene Symbol: LOC659974] [Locus Tag: TcasGA2_TC002647] [Chromosome: LG3] [Map Location: ] [Description: peroxisome assembly factor 2] [Gene Type: protein-coding]","TcasGA2_TC002647; LOC659974"]
[268,"NC_007418.3",16688917,"SNV","G","A","Homozygous",20,20,100,1,15,8,0.35,38.1,23,23,9,14,null,1,1,"no","A/A","No",1,82.49,"XP_008191268.1:c.1367G>A","XP_008191268.1:p.Arg456Lys","LOC659974",659974,null,"659974 [Gene Symbol: LOC659974] [Locus Tag: TcasGA2_TC002647] [Chromosome: LG3] [Map Location: ] [Description: peroxisome assembly factor 2] [Gene Type: protein-coding]","TcasGA2_TC002647; LOC659974"]
[270,"NC_007418.3",17579133,"SNV","A","G","Heterozygous",9,28,32.14,1,3,6,0.33,36,9,29,6,7,-1.89,0.45,0.67,"no","A/G","No",1,51.35,"XP_008191253.1:c.589A>G","XP_008191253.1:p.Arg197Gly","LOC103312428",103312428,null,"103312428 [Gene Symbol: LOC103312428] [Locus Tag: TcasGA2_TC002660] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15] [Gene Type: protein-coding]","TcasGA2_TC002660; LOC103312428"]
[273,"NC_007418.3",17584656,"SNV","C","T","Heterozygous",11,23,47.83,1,11,0,0,38.27,11,28,7,8,0.37,0.05,0.15,"no","complex","No",1,200,"XP_015833805.1:c.500C>T","XP_015833805.1:p.Ser167Phe","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[274,"NC_007418.3",17584715,"SNV","A","G","Homozygous",21,21,100,1,11,15,0.42,38.86,26,26,14,12,null,1,1,"no","G/G","No",1,83.89,"XP_015833805.1:c.559A>G","XP_015833805.1:p.Lys187Glu","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[275,"NC_007418.3",17584769,"SNV","T","A","Heterozygous",10,25,40,1,1,10,0.09,40.1,11,28,5,7,2.19,0.13,0.28,"no","A/T","No",1,70.91,"XP_015833805.1:c.613T>A","XP_015833805.1:p.Leu205Met","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[276,"NC_007418.3",17584935,"SNV","G","A","Heterozygous",12,31,38.71,1,5,9,0.36,38.75,14,38,6,7,0.43,0.59,1,"no","A/G","No",1,79.56,"XP_015833805.1:c.779G>A","XP_015833805.1:p.Arg260Lys","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[277,"NC_007418.3",17584967,"SNV","C","T","Heterozygous",13,22,59.09,1,4,13,0.24,37.46,17,33,5,6,-0.93,0.73,0.82,"no","C/T","No",1,68.12,"XP_015833805.1:c.811C>T","XP_015833805.1:p.Pro271Ser","LOC103312427",103312427,null,"103312427 [Gene Symbol: LOC103312427] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: leucine-rich repeat-containing protein 15-like] [Gene Type: protein-coding]","LOC103312427"]
[279,"NC_007418.3",18573388,"SNV","C","T","Heterozygous",13,23,56.52,1,13,2,0.13,37.46,15,27,7,8,0.99,0.53,0.51,"no","C/T","No",1,78.1,"XP_015833731.1:c.[533G>A]; XP_008191200.1:c.[321+212G>A]; XP_015833733.1:c.[370+163G>A]; XP_015833732.1:c.[533G>A]","XP_015833731.1:p.[Ser178Asn]; XP_015833732.1:p.[Ser178Asn]","LOC655187, LOC100142039","655187 , 100142039",null,"655187 [Gene Symbol: LOC655187] [Locus Tag: TcasGA2_TC002688] [Chromosome: LG3] [Map Location: ] [Description: D-2-hydroxyglutarate dehydrogenase, mitochondrial] [Gene Type: protein-coding] || 100142039 [Gene Symbol: LOC100142039] [Locus Tag: TcasGA2_TC003750] [Chromosome: LG3] [Map Location: ] [Description: jerky protein homolog-like] [Gene Type: protein-coding]","LOC655187; TcasGA2_TC002688 || TcasGA2_TC003750; LOC100142039"]
[281,"NC_007418.3",18630991,"SNV","G","A","Homozygous",20,20,100,1,13,7,0.35,39.05,20,20,10,13,null,1,1,"no","A/A","No",1,82.49,"XP_008191197.1:c.281G>A","XP_008191197.1:p.Arg94Lys","LOC103312417",103312417,null,"103312417 [Gene Symbol: LOC103312417] [Locus Tag: TcasGA2_TC030648] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312417] [Gene Type: protein-coding]","LOC103312417; TcasGA2_TC030648"]
[282,"NC_007418.3",18695083,"SNV","C","T","Heterozygous",9,25,36,1,9,4,0.31,37,13,29,7,4,-0.54,0.45,0.85,"no","C/T","No",1,58.13,"XP_972555.3:c.12634G>A","XP_972555.3:p.Val4212Ile","LOC661291",661291,null,"661291 [Gene Symbol: LOC661291] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: midasin] [Gene Type: protein-coding]","LOC661291; Mdn1"]
[283,"NC_007418.3",19152575,"SNV","T","C","Homozygous",21,21,100,1,19,14,0.42,39.19,33,33,11,11,null,1,1,"no","C/C","No",1,83.89,"XP_015833824.1:c.[583T>C]; XP_015833825.1:c.[583T>C]; XP_015833823.1:c.[583T>C]","XP_015833824.1:p.[Cys195Arg]; XP_015833825.1:p.[Cys195Arg]; XP_015833823.1:p.[Cys195Arg]","LOC103312863",103312863,null,"103312863 [Gene Symbol: LOC103312863] [Locus Tag: TcasGA2_TC031706] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312863] [Gene Type: protein-coding]","TcasGA2_TC031706; LOC103312863"]
[286,"NC_007418.3",19304659,"SNV","G","A","Heterozygous",17,44,38.64,1,7,14,0.33,37.76,21,62,6,7,2.22,0.3,0.99,"no","A/G","No",1,107.1,"XP_970641.1:c.73G>A","XP_970641.1:p.Glu25Lys","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[287,"NC_007418.3",19304710,"SNV","G","A","Heterozygous",11,26,42.31,1,2,11,0.15,38.64,13,28,4,6,-0.39,0.6,0.96,"no","A/G","No",1,80.81,"XP_970641.1:c.124G>A","XP_970641.1:p.Glu42Lys","LOC659223",659223,null,"659223 [Gene Symbol: LOC659223] [Locus Tag: TcasGA2_TC011193] [Chromosome: LG3] [Map Location: ] [Description: asparagine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","TcasGA2_TC011193; LOC659223"]
[289,"NC_007418.3",19766049,"SNV","A","T","Homozygous",23,23,100,1,5,18,0.22,39.26,23,23,5,7,null,1,1,"no","T/T","No",1,91.54,"XP_008197069.1:c.[1515A>T]; XP_015833907.1:c.[1515A>T]; XP_976287.1:c.[1515A>T]","XP_008197069.1:p.[Glu505Asp]; XP_015833907.1:p.[Glu505Asp]; XP_976287.1:p.[Glu505Asp]","LOC658548",658548,null,"658548 [Gene Symbol: LOC658548] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC658548] [Gene Type: protein-coding]","LOC658548"]
[292,"NC_007418.3",20314892,"SNV","G","A","Homozygous",22,22,100,1,13,9,0.41,38.23,22,22,14,11,null,1,1,"no","A/A","No",1,88.5,"XP_008194039.1:c.649C>T","XP_008194039.1:p.His217Tyr","LOC100142515",100142515,null,"100142515 [Gene Symbol: LOC100142515] [Locus Tag: TcasGA2_TC002117] [Chromosome: LG3] [Map Location: ] [Description: calpain-A] [Gene Type: protein-coding]","LOC100142515; TcasGA2_TC002117"]
[293,"NC_007418.3",20381350,"SNV","C","A","Heterozygous",11,21,52.38,1,10,2,0.17,35.64,12,22,7,7,-1.27,0.7,0.99,"no","A/C","No",1,79.56,"XP_008194055.1:c.[100C>A]; XP_008194070.1:c.[746-6138G>T]; XP_015833856.1:c.[746-6138G>T]","XP_008194055.1:p.Pro34Thr","LOC657445, LOC657603","657445 , 657603",null,"657445 [Gene Symbol: LOC657445] [Locus Tag: TcasGA2_TC002113] [Chromosome: LG3] [Map Location: ] [Description: ALK tyrosine kinase receptor] [Gene Type: protein-coding] || 657603 [Gene Symbol: LOC657603] [Locus Tag: TcasGA2_TC002148] [Chromosome: LG3] [Map Location: ] [Description: inactive peptidyl-prolyl cis-trans isomerase shutdown] [Gene Type: protein-coding]","LOC657445; TcasGA2_TC002113 || LOC657603; TcasGA2_TC002148"]
[294,"NC_007418.3",20381378,"SNV","A","G","Heterozygous",13,23,56.52,1,5,10,0.33,35.92,15,25,6,8,-0.34,0.7,0.7,"no","A/G","No",1,76.42,"XP_015833856.1:c.[746-6166T>C]; XP_008194070.1:c.[746-6166T>C]; XP_008194055.1:c.[128A>G]","XP_008194055.1:p.Lys43Arg","LOC657445, LOC657603","657445 , 657603",null,"657445 [Gene Symbol: LOC657445] [Locus Tag: TcasGA2_TC002113] [Chromosome: LG3] [Map Location: ] [Description: ALK tyrosine kinase receptor] [Gene Type: protein-coding] || 657603 [Gene Symbol: LOC657603] [Locus Tag: TcasGA2_TC002148] [Chromosome: LG3] [Map Location: ] [Description: inactive peptidyl-prolyl cis-trans isomerase shutdown] [Gene Type: protein-coding]","LOC657445; TcasGA2_TC002113 || LOC657603; TcasGA2_TC002148"]
[296,"NC_007418.3","21538965..21538966","MNV","CA","AT","Heterozygous",19,24,79.17,1,18,10,0.36,37.47,28,33,17,12,0.1,1,0.99,"no","complex","No",1,200,"XP_015833904.1:c.[2411_2412delTGinsAT]; XP_008191327.2:c.[2411_2412delTGinsAT]","XP_015833904.1:p.[Val804Asp]; XP_008191327.2:p.[Val804Asp]","LOC103312456",103312456,null,"103312456 [Gene Symbol: LOC103312456] [Locus Tag: TcasGA2_TC002611] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC103312456] [Gene Type: protein-coding]","LOC103312456; TcasGA2_TC002611"]
[300,"NC_007418.3",23011472,"SNV","T","G","Heterozygous",15,30,50,1,2,15,0.12,37.8,17,32,7,8,-0.37,0.14,0.2,"no","G/T","No",1,115.34,"XP_015833911.1:c.1436T>G","XP_015833911.1:p.Phe479Cys","LOC107397628",107397628,null,"107397628 [Gene Symbol: LOC107397628] [Locus Tag: TcasGA2_TC032575] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397628] [Gene Type: protein-coding]","TcasGA2_TC032575; LOC107397628"]
[301,"NC_007418.3",23011491,"SNV","G","C","Homozygous",29,29,100,1,10,22,0.31,38.41,32,32,13,19,null,1,1,"no","C/C","No",1,107.97,"XP_015833911.1:c.1455G>C","XP_015833911.1:p.Lys485Asn","LOC107397628",107397628,null,"107397628 [Gene Symbol: LOC107397628] [Locus Tag: TcasGA2_TC032575] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC107397628] [Gene Type: protein-coding]","TcasGA2_TC032575; LOC107397628"]
[302,"NC_007418.3",24202536,"SNV","A","T","Heterozygous",12,21,57.14,1,12,9,0.43,38.67,21,31,7,7,-1.63,0.91,1,"no","A/T","No",1,69.28,"XP_008198962.1:c.[1132T>A]; NP_001159495.1:c.[487+434T>A]","XP_008198962.1:p.Leu378Met","Lyz, LOC103314494","658610 , 103314494","lysozyme","658610 [Gene Symbol: Lyz] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: lysozyme] [Gene Type: protein-coding] || 103314494 [Gene Symbol: LOC103314494] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: sensory neuron membrane protein 2] [Gene Type: protein-coding]","Lyz; TC010350; TC010351; TC010352 || LOC103314494"]
[304,"NC_007418.3",24666872,"SNV","C","T","Homozygous",24,24,100,1,5,24,0.17,38,29,29,7,11,null,1,1,"no","T/T","No",1,94.55,"XP_971115.1:c.470G>A","XP_971115.1:p.Arg157Lys","LOC659745",659745,null,"659745 [Gene Symbol: LOC659745] [Locus Tag: TcasGA2_TC010343] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC659745] [Gene Type: protein-coding]","LOC659745; TcasGA2_TC010343"]
[305,"NC_007418.3",25104288,"SNV","A","G","Heterozygous",12,31,38.71,1,12,1,0.08,39.75,13,36,5,12,1.58,0.06,0.11,"no","A/G","No",1,81.31,"XP_015833997.1:c.296A>G","XP_015833997.1:p.Asn99Ser","LOC103314489",103314489,null,"103314489 [Gene Symbol: LOC103314489] [Locus Tag: TcasGA2_TC010385] [Chromosome: LG3] [Map Location: ] [Description: sodium-dependent neutral amino acid transporter B(0)AT2] [Gene Type: protein-coding]","TcasGA2_TC010385; LOC103314489"]
[309,"NC_007418.3",25300319,"SNV","T","C","Homozygous",20,20,100,1,11,13,0.46,38.4,24,24,9,17,null,1,1,"no","C/C","No",1,80.88,"XP_972552.3:c.988A>G","XP_972552.3:p.Met330Val","LOC661288",661288,null,"661288 [Gene Symbol: LOC661288] [Locus Tag: TcasGA2_TC010323] [Chromosome: LG3] [Map Location: ] [Description: uncharacterized LOC661288] [Gene Type: protein-coding]","LOC661288; TcasGA2_TC010323"]
[314,"NC_007418.3",25908092,"SNV","A","G","Heterozygous",12,26,46.15,1,7,5,0.42,38,12,29,5,6,-1.08,0.77,1,"no","A/G","No",1,95.21,"XP_015834034.1:c.1483T>C","XP_015834034.1:p.Phe495Leu","LOC656565, LOC657482","656565 , 657482",null,"656565 [Gene Symbol: LOC656565] [Locus Tag: TcasGA2_TC002522] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase Src64B] [Gene Type: protein-coding] || 657482 [Gene Symbol: LOC657482] [Locus Tag: TcasGA2_TC002520] [Chromosome: LG3] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2] [Gene Type: protein-coding]","LOC656565; TcasGA2_TC002522 || TcasGA2_TC002520; LOC657482"]
[316,"NC_007418.3",25908598,"SNV","C","T","Heterozygous",7,20,35,1,3,5,0.38,35.29,8,21,5,8,-2.02,0.47,0.94,"no","complex","No",1,200,"XP_015834034.1:c.1021G>A","XP_015834034.1:p.Val341Ile","LOC656565, LOC657482","656565 , 657482",null,"656565 [Gene Symbol: LOC656565] [Locus Tag: TcasGA2_TC002522] [Chromosome: LG3] [Map Location: ] [Description: tyrosine-protein kinase Src64B] [Gene Type: protein-coding] || 657482 [Gene Symbol: LOC657482] [Locus Tag: TcasGA2_TC002520] [Chromosome: LG3] [Map Location: ] [Description: sodium-coupled monocarboxylate transporter 2] [Gene Type: protein-coding]","LOC656565; TcasGA2_TC002522 || TcasGA2_TC002520; LOC657482"]
[319,"NC_007418.3",26374999,"SNV","A","G","Homozygous",22,22,100,1,15,10,0.4,36.18,25,25,13,15,null,1,1,"no","G/G","No",1,86.89,"XP_015834045.1:c.371T>C","XP_015834045.1:p.Val124Ala","LOC103312484",103312484,null,"103312484 [Gene Symbol: LOC103312484] [Locus Tag: TcasGA2_TC002502] [Chromosome: LG3] [Map Location: ] [Description: protein ABHD12B] [Gene Type: protein-coding]","LOC103312484; TcasGA2_TC002502"]
[320,"NC_007418.3",26524688,"SNV","C","T","Heterozygous",11,22,50,1,4,7,0.36,37.36,11,22,3,6,-0.56,0.25,1,"no","C/T","No",1,89.69,"NP_001092299.1:c.974G>A","NP_001092299.1:p.Arg325Lys","Th",654918,"tyrosine hydroxylase","654918 [Gene Symbol: Th] [Locus Tag: TcasGA2_TC002496] [Chromosome: LG3] [Map Location: ] [Description: tyrosine hydroxylase] [Gene Type: protein-coding]","Th; TcasGA2_TC002496"]
[321,"NC_007418.3",27438310,"SNV","G","T","Heterozygous",15,30,50,1,14,10,0.42,36.6,24,39,7,9,-2.76,0.31,0.87,"no","G/T","No",1,115.36,"XP_976216.1:c.392C>A","XP_976216.1:p.Ala131Glu","LOC656927",656927,null,"656927 [Gene Symbol: LOC656927] [Locus Tag: TcasGA2_TC002483] [Chromosome: LG3] [Map Location: ] [Description: coiled-coil domain-containing protein 86] [Gene Type: protein-coding]","LOC656927; TcasGA2_TC002483"]
[322,"NC_007418.3",27438323,"SNV","G","A","Heterozygous",15,30,50,1,11,14,0.44,35.73,25,45,7,6,-2.26,0.18,0.93,"no","A/G","No",1,112.07,"XP_976216.1:c.379C>T","XP_976216.1:p.Pro127Ser","LOC656927",656927,null,"656927 [Gene Symbol: LOC656927] [Locus Tag: TcasGA2_TC002483] [Chromosome: LG3] [Map Location: ] [Description: coiled-coil domain-containing protein 86] [Gene Type: protein-coding]","LOC656927; TcasGA2_TC002483"]
[323,"NC_007418.3",27438333,"SNV","T","G","Heterozygous",16,29,55.17,1,9,16,0.36,35.75,25,43,7,6,1.12,0.52,0.9,"no","G/T","No",1,93.29,"XP_976216.1:c.369A>C","XP_976216.1:p.Gln123His","LOC656927",656927,null,"656927 [Gene Symbol: LOC656927] [Locus Tag: TcasGA2_TC002483] [Chromosome: LG3] [Map Location: ] [Description: coiled-coil domain-containing protein 86] [Gene Type: protein-coding]","LOC656927; TcasGA2_TC002483"]
[324,"NC_007418.3",27826061,"SNV","A","C","Homozygous",21,21,100,1,14,7,0.33,37.9,21,21,9,14,null,1,1,"no","C/C","No",1,83.89,"XP_967329.1:c.259T>G","XP_967329.1:p.Ser87Ala","LOC655674",655674,null,"655674 [Gene Symbol: LOC655674] [Locus Tag: TcasGA2_TC002471] [Chromosome: LG3] [Map Location: ] [Description: sulfhydryl oxidase 2] [Gene Type: protein-coding]","TcasGA2_TC002471; LOC655674"]
[325,"NC_007418.3",27826253,"SNV","T","C","Homozygous",24,24,100,1,8,16,0.33,39.29,24,24,5,15,null,1,1,"no","C/C","No",1,92.92,"XP_967329.1:c.67A>G","XP_967329.1:p.Ile23Val","LOC655674",655674,null,"655674 [Gene Symbol: LOC655674] [Locus Tag: TcasGA2_TC002471] [Chromosome: LG3] [Map Location: ] [Description: sulfhydryl oxidase 2] [Gene Type: protein-coding]","TcasGA2_TC002471; LOC655674"]
[326,"NC_007418.3",27964952,"SNV","T","A","Homozygous",23,23,100,1,15,10,0.4,39.39,25,25,10,15,null,1,1,"no","A/A","No",1,91.51,"XP_015834126.1:c.[693-2409T>A]; XP_015834121.1:c.[692+57176T>A]; XP_015834138.1:c.[693-34353T>A]; XP_015834137.1:c.[693-9614T>A]; XP_015834125.1:c.[693-39075T>A]; XP_015834129.1:c.[693-5180T>A]; XP_015834143.1:c.[693-12055T>A]; XP_015834130.1:c.[693-42952T>A]; XP_015834123.1:c.[693-46419T>A]; XP_015834163.1:c.[693-2409T>A]; XP_015834115.1:c.[693-53439T>A]; XP_015834127.1:c.[693-22662T>A]; XP_015834134.1:c.[822T>A]; XP_015834152.1:c.[693-19611T>A]; XP_015834156.1:c.[693-15341T>A]; XP_015834157.1:c.[693-14330T>A]; XP_015834114.1:c.[693-30277T>A]; XP_015834140.1:c.[693-18089T>A]; XP_015834124.1:c.[693-25738T>A]; XP_015834116.1:c.[693-49933T>A]; XP_015834162.1:c.[693-36667T>A]; XP_015834131.1:c.[693-7568T>A]","XP_015834134.1:p.Asn274Lys","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[329,"NC_007418.3",27965724,"SNV","C","T","Homozygous",21,21,100,1,15,10,0.4,38.62,25,25,9,14,null,1,1,"no","T/T","No",1,85.53,"XP_015834152.1:c.[693-18839C>T]; XP_015834116.1:c.[693-49161C>T]; XP_015834115.1:c.[693-52667C>T]; XP_015834123.1:c.[693-45647C>T]; XP_015834125.1:c.[693-38303C>T]; XP_015834134.1:c.[1460C>T]; XP_015834131.1:c.[693-6796C>T]; XP_015834130.1:c.[693-42180C>T]; XP_015834126.1:c.[693-1637C>T]; XP_015834156.1:c.[693-14569C>T]; XP_015834157.1:c.[693-13558C>T]; XP_015834163.1:c.[693-1637C>T]; XP_015834137.1:c.[693-8842C>T]; XP_015834140.1:c.[693-17317C>T]; XP_015834121.1:c.[692+57948C>T]; XP_015834162.1:c.[693-35895C>T]; XP_015834138.1:c.[693-33581C>T]; XP_015834114.1:c.[693-29505C>T]; XP_015834124.1:c.[693-24966C>T]; XP_015834127.1:c.[693-21890C>T]; XP_015834143.1:c.[693-11283C>T]; XP_015834129.1:c.[693-4408C>T]","XP_015834134.1:p.Thr487Ile","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[330,"NC_007418.3","27965815..27965816","MNV","AT","GC","Heterozygous",15,20,75,1,4,12,0.25,35.77,16,21,7,9,-4,0.94,0.97,"no","complex","No",1,200,"XP_015834124.1:c.[693-24875_693-24874delATinsGC]; XP_015834140.1:c.[693-17226_693-17225delATinsGC]; XP_015834152.1:c.[693-18748_693-18747delATinsGC]; XP_015834134.1:c.[1551_1552delATinsGC]; XP_015834143.1:c.[693-11192_693-11191delATinsGC]; XP_015834125.1:c.[693-38212_693-38211delATinsGC]; XP_015834156.1:c.[693-14478_693-14477delATinsGC]; XP_015834138.1:c.[693-33490_693-33489delATinsGC]; XP_015834130.1:c.[693-42089_693-42088delATinsGC]; XP_015834129.1:c.[693-4317_693-4316delATinsGC]; XP_015834157.1:c.[693-13467_693-13466delATinsGC]; XP_015834126.1:c.[693-1546_693-1545delATinsGC]; XP_015834163.1:c.[693-1546_693-1545delATinsGC]; XP_015834127.1:c.[693-21799_693-21798delATinsGC]; XP_015834131.1:c.[693-6705_693-6704delATinsGC]; XP_015834114.1:c.[693-29414_693-29413delATinsGC]; XP_015834116.1:c.[693-49070_693-49069delATinsGC]; XP_015834115.1:c.[693-52576_693-52575delATinsGC]; XP_015834162.1:c.[693-35804_693-35803delATinsGC]; XP_015834123.1:c.[693-45556_693-45555delATinsGC]; XP_015834121.1:c.[692+58039_692+58040delATinsGC]; XP_015834137.1:c.[693-8751_693-8750delATinsGC]","XP_015834134.1:p.Cys518Arg","LOC656007",656007,null,"656007 [Gene Symbol: LOC656007] [Locus Tag: TcasGA2_TC003945] [Chromosome: LG3] [Map Location: LG3|LG3] [Description: zinc finger protein OZF] [Gene Type: protein-coding]","TcasGA2_TC003945; grauzone; grau; LOC656007"]
[331,"NC_007418.3",28612224,"SNV","G","C","Heterozygous",9,20,45,1,9,2,0.18,39.44,11,22,5,5,0.91,0.1,0.22,"no","C/G","No",1,72.71,"XP_973222.1:c.585G>C","XP_973222.1:p.Gln195His","LOC662003",662003,null,"662003 [Gene Symbol: LOC662003] [Locus Tag: TcasGA2_TC002416] [Chromosome: LG3] [Map Location: ] [Description: protein lin-7 homolog C] [Gene Type: protein-coding]","LOC662003; TcasGA2_TC002416"]
[334,"NC_007418.3",29028947,"SNV","G","T","Homozygous",20,20,100,1,11,12,0.48,38.85,23,23,10,10,null,1,1,"no","T/T","No",1,82.52,"XP_015834189.1:c.[31185C>A]; XP_015834201.1:c.[31197C>A]; XP_015834200.1:c.[19767C>A]; XP_015834202.1:c.[31197C>A]; XP_015834192.1:c.[31197C>A]; XP_015834199.1:c.[19785C>A]; XP_015834196.1:c.[25838-2180C>A]; XP_015834191.1:c.[30837C>A]; XP_015834198.1:c.[31197C>A]; XP_015834194.1:c.[31197C>A]; XP_015834190.1:c.[31092C>A]; XP_015834195.1:c.[28581C>A]; XP_015834197.1:c.[31197C>A]","XP_015834189.1:p.[His10395Gln]; XP_015834201.1:p.[His10399Gln]; XP_015834200.1:p.[His6589Gln]; XP_015834202.1:p.[His10399Gln]; XP_015834192.1:p.[His10399Gln]; XP_015834199.1:p.[His6595Gln]; XP_015834191.1:p.[His10279Gln]; XP_015834198.1:p.[His10399Gln]; XP_015834194.1:p.[His10399Gln]; XP_015834190.1:p.[His10364Gln]; XP_015834195.1:p.[His9527Gln]; XP_015834197.1:p.[His10399Gln]","LOC660533",660533,null,"660533 [Gene Symbol: LOC660533] [Locus Tag: TcasGA2_TC003987] [Chromosome: LG3] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC003987; LOC660533"]
[338,"NC_007418.3",29531740,"SNV","C","T","Homozygous",19,20,95,1,15,5,0.25,39.11,20,21,7,15,null,1,1,"no","T/T","No",1,50.25,"XP_015834188.1:c.2044G>A","XP_015834188.1:p.Glu682Lys","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[339,"NC_007418.3",29532105,"SNV","G","A","Heterozygous",5,22,22.73,1,3,2,0.4,40.8,5,28,3,3,1.49,0.68,0.99,"no","complex","No",1,103.8,"XP_015834188.1:c.1679C>T","XP_015834188.1:p.Ser560Leu","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[340,"NC_007418.3",29532111,"SNV","A","T","Heterozygous",9,22,40.91,1,5,8,0.38,39.11,13,28,5,5,-0.1,0.17,0.83,"no","A/T","No",1,66.56,"XP_015834188.1:c.1673T>A","XP_015834188.1:p.Leu558Gln","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[344,"NC_007418.3",29532208,"SNV","C","T","Heterozygous",11,30,36.67,1,1,11,0.08,38.73,12,36,6,6,0.99,0.09,0.36,"no","C/T","No",1,69.61,"XP_015834188.1:c.1576G>A","XP_015834188.1:p.Asp526Asn","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[345,"NC_007418.3",29532244,"SNV","G","A","Heterozygous",13,31,41.94,1,6,12,0.33,38,18,37,4,4,-0.94,0.24,1,"no","A/G","No",1,92.35,"XP_015834188.1:c.1540C>T","XP_015834188.1:p.Pro514Ser","LOC103312507",103312507,null,"103312507 [Gene Symbol: LOC103312507] [Locus Tag: ] [Chromosome: LG3] [Map Location: ] [Description: protein piccolo-like] [Gene Type: protein-coding]","LOC103312507"]
[347,"NC_007419.2",305225,"SNV","C","G","Homozygous",22,22,100,1,12,16,0.43,38.86,28,28,4,8,null,1,1,"no","G/G","No",1,86.9,"XP_008191566.1:c.128C>G","XP_008191566.1:p.Ala43Gly","LOC658657",658657,null,"658657 [Gene Symbol: LOC658657] [Locus Tag: TcasGA2_TC030714] [Chromosome: LG4] [Map Location: ] [Description: zinc finger matrin-type protein CG9776] [Gene Type: protein-coding]","TcasGA2_TC030714; LOC658657"]
[348,"NC_007419.2",507550,"SNV","A","C","Heterozygous",10,20,50,1,5,7,0.42,37.1,12,26,4,5,0.83,0.18,1,"no","A/C","No",1,79.55,"XP_968279.3:c.320T>G","XP_968279.3:p.Val107Gly","LOC656677",656677,null,"656677 [Gene Symbol: LOC656677] [Locus Tag: TcasGA2_TC007752] [Chromosome: LG4] [Map Location: ] [Description: protein stoned-B] [Gene Type: protein-coding]","LOC656677; TcasGA2_TC007752"]
[349,"NC_007419.2",981793,"SNV","C","T","Heterozygous",17,34,50,1,3,14,0.18,37.12,17,37,4,12,-0.79,0.48,1,"no","C/T","No",1,132.77,"XP_015834729.1:c.[586C>T]; XP_015834730.1:c.[586C>T]","XP_015834729.1:p.[Pro196Ser]; XP_015834730.1:p.[Pro196Ser]","LOC663614",663614,null,"663614 [Gene Symbol: LOC663614] [Locus Tag: TcasGA2_TC007819] [Chromosome: LG4] [Map Location: ] [Description: MAGUK p55 subfamily member 5-A] [Gene Type: protein-coding]","LOC663614; TcasGA2_TC007819"]
[350,"NC_007419.2","1048807^1048808","Insertion","-","G","Heterozygous",8,21,38.1,1,0,8,0,40.5,8,24,1,1,2.97,0.04,0.31,"no","-/G","No",1,58.71,"XP_008191709.1:c.648_649insG","XP_008191709.1:p.Leu217fs","LOC663740",663740,null,"663740 [Gene Symbol: LOC663740] [Locus Tag: TcasGA2_TC007824] [Chromosome: LG4] [Map Location: ] [Description: hyaluronan mediated motility receptor] [Gene Type: protein-coding]","TcasGA2_TC007824; LOC663740"]
[351,"NC_007419.2",1053523,"SNV","C","G","Homozygous",21,21,100,1,16,10,0.38,36.71,26,26,6,13,null,1,1,"no","G/G","No",1,83.88,"XP_008191710.1:c.736G>C","XP_008191710.1:p.Gly246Arg","LOC663752",663752,null,"663752 [Gene Symbol: LOC663752] [Locus Tag: TcasGA2_TC007674] [Chromosome: LG4] [Map Location: ] [Description: neurotactin] [Gene Type: protein-coding]","LOC663752; TcasGA2_TC007674"]
[352,"NC_007419.2",1086955,"SNV","C","G","Heterozygous",17,26,65.38,1,8,9,0.47,40,17,26,4,10,2.59,0.36,0.68,"no","C/G","No",1,56,"XP_008191713.1:c.[543G>C]; XP_974913.2:c.[543G>C]; XP_008191712.1:c.[543G>C]","XP_008191713.1:p.[Lys181Asn]; XP_974913.2:p.[Lys181Asn]; XP_008191712.1:p.[Lys181Asn]","LOC663785",663785,null,"663785 [Gene Symbol: LOC663785] [Locus Tag: TcasGA2_TC007672] [Chromosome: LG4] [Map Location: ] [Description: tyrosine-protein phosphatase 10D] [Gene Type: protein-coding]","LOC663785; TcasGA2_TC007672"]
[355,"NC_007419.2","1587527..1587528","MNV","GT","AC","Homozygous",26,26,100,1,10,24,0.29,37.87,34,34,14,18,null,1,1,"no","AC/AC","No",1,200,"XP_967893.2:c.877_878delGTinsAC","XP_967893.2:p.Val293Thr","LOC656259",656259,null,"656259 [Gene Symbol: LOC656259] [Locus Tag: TcasGA2_TC007853] [Chromosome: LG4] [Map Location: ] [Description: serine hydrolase-like protein] [Gene Type: protein-coding]","LOC656259; TcasGA2_TC007853"]
[356,"NC_007419.2",2397261,"SNV","A","G","Heterozygous",10,20,50,1,8,4,0.33,38.4,12,28,7,7,-0.57,0.16,0.88,"no","A/G","No",1,82.5,"XP_015835100.1:c.1075T>C","XP_015835100.1:p.Ser359Pro","LOC661316",661316,null,"661316 [Gene Symbol: LOC661316] [Locus Tag: TcasGA2_TC007608] [Chromosome: LG4] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC661316; TcasGA2_TC007608"]
[358,"NC_007419.2",2622380,"SNV","A","G","Heterozygous",8,22,36.36,1,3,5,0.38,39.5,8,30,2,4,2.87,0.07,0.92,"no","A/G","No",1,55.3,"XP_973259.1:c.[470A>G]; XP_008191832.1:c.[470A>G]","XP_973259.1:p.[Asn157Ser]; XP_008191832.1:p.[Asn157Ser]","LOC662042",662042,null,"662042 [Gene Symbol: LOC662042] [Locus Tag: TcasGA2_TC007912] [Chromosome: LG4] [Map Location: ] [Description: alpha-N-acetylglucosaminidase] [Gene Type: protein-coding]","TcasGA2_TC007912; LOC662042"]
[362,"NC_007419.2",3032265,"SNV","G","T","Homozygous",25,25,100,1,13,12,0.48,37.64,25,25,10,12,null,1,1,"no","T/T","No",1,97.57,"XP_008191884.2:c.1397C>A","XP_008191884.2:p.Thr466Lys","LOC100142051",100142051,null,"100142051 [Gene Symbol: LOC100142051] [Locus Tag: TcasGA2_TC007557] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142051] [Gene Type: protein-coding]","TcasGA2_TC007557; LOC100142051"]
[363,"NC_007419.2",3032272,"SNV","T","G","Homozygous",23,23,100,1,13,10,0.43,37.09,23,23,9,11,null,1,1,"no","G/G","No",1,89.91,"XP_008191884.2:c.1390A>C","XP_008191884.2:p.Lys464Gln","LOC100142051",100142051,null,"100142051 [Gene Symbol: LOC100142051] [Locus Tag: TcasGA2_TC007557] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142051] [Gene Type: protein-coding]","TcasGA2_TC007557; LOC100142051"]
[365,"NC_007419.2",3036548,"SNV","A","G","Homozygous",20,21,95.24,1,8,14,0.36,39.2,22,23,9,9,null,0.98,1,"no","G/G","No",1,51.55,"XP_008191885.1:c.1744T>C","XP_008191885.1:p.Tyr582His","LOC103312611",103312611,null,"103312611 [Gene Symbol: LOC103312611] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312611] [Gene Type: protein-coding]","LOC103312611"]
[366,"NC_007419.2",3036688,"SNV","A","T","Homozygous",20,20,100,1,14,11,0.44,37.45,25,25,12,12,null,1,1,"no","T/T","No",1,82.52,"XP_008191885.1:c.1604T>A","XP_008191885.1:p.Val535Glu","LOC103312611",103312611,null,"103312611 [Gene Symbol: LOC103312611] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312611] [Gene Type: protein-coding]","LOC103312611"]
[367,"NC_007419.2",3065371,"SNV","A","T","Homozygous",30,30,100,1,10,20,0.33,36.93,30,30,10,14,null,1,1,"no","T/T","No",1,112.61,"XP_008191910.2:c.770A>T","XP_008191910.2:p.Gln257Leu","LOC663615, LOC103312621","663615 , 103312621",null,"663615 [Gene Symbol: LOC663615] [Locus Tag: TcasGA2_TC007554] [Chromosome: LG4] [Map Location: ] [Description: neuroglobin] [Gene Type: protein-coding] || 103312621 [Gene Symbol: LOC103312621] [Locus Tag: TcasGA2_TC007948] [Chromosome: LG4] [Map Location: ] [Description: carboxypeptidase N subunit 2] [Gene Type: protein-coding]","LOC663615; TcasGA2_TC007554 || TcasGA2_TC007948; LOC103312621"]
[371,"NC_007419.2",3220906,"SNV","C","G","Heterozygous",8,20,40,1,5,4,0.44,38,9,24,3,5,-0.19,0.05,0.65,"no","C/G","No",1,59.68,"XP_015835102.1:c.[150C>G]; XP_015835101.1:c.[150C>G]","XP_015835102.1:p.[Phe50Leu]; XP_015835101.1:p.[Phe50Leu]","LOC103312576",103312576,null,"103312576 [Gene Symbol: LOC103312576] [Locus Tag: TcasGA2_TC030133] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312576] [Gene Type: protein-coding]","LOC103312576; TcGr36; TcGr34; TcasGA2_TC030133"]
[372,"NC_007419.2",3221037,"SNV","C","A","Homozygous",21,21,100,1,15,8,0.35,37.19,23,23,10,11,null,1,1,"no","A/A","No",1,85.5,"XP_015835101.1:c.[281C>A]; XP_015835102.1:c.[281C>A]","XP_015835101.1:p.[Ala94Glu]; XP_015835102.1:p.[Ala94Glu]","LOC103312576",103312576,null,"103312576 [Gene Symbol: LOC103312576] [Locus Tag: TcasGA2_TC030133] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312576] [Gene Type: protein-coding]","LOC103312576; TcGr36; TcGr34; TcasGA2_TC030133"]
[376,"NC_007419.2",3713951,"SNV","A","T","Homozygous",25,25,100,1,7,20,0.26,38.6,27,27,8,16,null,1,1,"no","T/T","No",1,97.56,"XP_015834669.1:c.[1872A>T]; XP_015834668.1:c.[2412A>T]","XP_015834669.1:p.[Leu624Phe]; XP_015834668.1:p.[Leu804Phe]","LOC100141608",100141608,null,"100141608 [Gene Symbol: LOC100141608] [Locus Tag: TcasGA2_TC008000] [Chromosome: LG4] [Map Location: ] [Description: acyl-CoA synthetase family member 4] [Gene Type: protein-coding]","LOC100141608; TcasGA2_TC008000"]
[377,"NC_007419.2",3713992,"SNV","G","A","Homozygous",24,24,100,1,8,22,0.27,38,30,30,8,17,null,1,1,"no","A/A","No",1,94.52,"XP_015834669.1:c.[1913G>A]; XP_015834668.1:c.[2453G>A]","XP_015834669.1:p.[Ser638Asn]; XP_015834668.1:p.[Ser818Asn]","LOC100141608",100141608,null,"100141608 [Gene Symbol: LOC100141608] [Locus Tag: TcasGA2_TC008000] [Chromosome: LG4] [Map Location: ] [Description: acyl-CoA synthetase family member 4] [Gene Type: protein-coding]","LOC100141608; TcasGA2_TC008000"]
[378,"NC_007419.2",3713995,"SNV","A","G","Homozygous",23,23,100,1,7,21,0.25,37.61,28,28,9,15,null,1,1,"no","G/G","No",1,89.91,"XP_015834669.1:c.[1916A>G]; XP_015834668.1:c.[2456A>G]","XP_015834669.1:p.[Glu639Gly]; XP_015834668.1:p.[Glu819Gly]","LOC100141608",100141608,null,"100141608 [Gene Symbol: LOC100141608] [Locus Tag: TcasGA2_TC008000] [Chromosome: LG4] [Map Location: ] [Description: acyl-CoA synthetase family member 4] [Gene Type: protein-coding]","LOC100141608; TcasGA2_TC008000"]
[381,"NC_007419.2",3997534,"SNV","G","A","Homozygous",22,22,100,1,11,21,0.34,37.23,32,32,11,12,null,1,1,"no","A/A","No",1,88.5,"XP_015834910.1:c.[928C>T]; XP_970656.1:c.[979C>T]","XP_015834910.1:p.[Pro310Ser]; XP_970656.1:p.[Pro327Ser]","LOC659238",659238,null,"659238 [Gene Symbol: LOC659238] [Locus Tag: TcasGA2_TC007473] [Chromosome: LG4] [Map Location: ] [Description: histone deacetylase 11] [Gene Type: protein-coding]","TcasGA2_TC007473; LOC659238"]
[383,"NC_007419.2",4000532,"SNV","A","T","Homozygous",31,31,100,1,18,13,0.42,38.97,31,31,9,18,null,1,1,"no","T/T","No",1,115.61,"XP_008192044.1:c.885A>T","XP_008192044.1:p.Gln295His","LOC659312",659312,null,"659312 [Gene Symbol: LOC659312] [Locus Tag: TcasGA2_TC008020] [Chromosome: LG4] [Map Location: ] [Description: paramyosin] [Gene Type: protein-coding]","TcasGA2_TC008020; LOC659312"]
[384,"NC_007419.2",4013261,"SNV","G","C","Homozygous",24,24,100,1,17,7,0.29,37.88,24,24,8,17,null,1,1,"no","C/C","No",1,92.92,"XP_008192048.1:c.3460G>C","XP_008192048.1:p.Ala1154Pro","LOC659578",659578,null,"659578 [Gene Symbol: LOC659578] [Locus Tag: TcasGA2_TC008022] [Chromosome: LG4] [Map Location: ] [Description: transmembrane protein 131] [Gene Type: protein-coding]","TcasGA2_TC008022; LOC659578"]
[386,"NC_007419.2",4065692,"SNV","C","T","Homozygous",21,21,100,1,6,15,0.29,38.62,21,21,8,13,null,1,1,"no","T/T","No",1,85.53,"XP_008192378.1:c.962C>T","XP_008192378.1:p.Ser321Phe","LOC103312731",103312731,null,"103312731 [Gene Symbol: LOC103312731] [Locus Tag: TcasGA2_TC032800] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312731] [Gene Type: protein-coding]","LOC103312731; TcasGA2_TC032800"]
[388,"NC_007419.2",4095493,"SNV","G","A","Homozygous",19,20,95,1,17,4,0.19,37.68,21,22,10,13,null,1,1,"no","A/A","No",1,51.93,"XP_015834822.1:c.2800G>A","XP_015834822.1:p.Gly934Ser","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[389,"NC_007419.2",4095620,"SNV","G","A","Homozygous",26,26,100,1,2,24,0.08,38.42,26,26,9,16,null,1,1,"no","A/A","No",1,100.54,"XP_015834822.1:c.2882G>A","XP_015834822.1:p.Ser961Asn","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[390,"NC_007419.2",4097181,"SNV","T","A","Homozygous",23,23,100,1,15,8,0.35,37.17,23,23,12,16,null,1,1,"no","A/A","No",1,91.52,"XP_015834822.1:c.4255T>A","XP_015834822.1:p.Ser1419Thr","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[391,"NC_007419.2",4097211,"SNV","A","T","Homozygous",22,22,100,1,16,8,0.33,36.32,24,24,9,16,null,1,1,"no","T/T","No",1,88.54,"XP_015834822.1:c.4285A>T","XP_015834822.1:p.Ile1429Leu","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[392,"NC_007419.2",4097490,"SNV","G","A","Homozygous",20,20,100,1,8,15,0.35,38.2,23,23,9,11,null,1,1,"no","A/A","No",1,82.49,"XP_015834822.1:c.4564G>A","XP_015834822.1:p.Val1522Ile","LOC103312732",103312732,null,"103312732 [Gene Symbol: LOC103312732] [Locus Tag: TcasGA2_TC008029] [Chromosome: LG4] [Map Location: ] [Description: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1] [Gene Type: protein-coding]","LOC103312732; TcasGA2_TC008029"]
[393,"NC_007419.2",4100363,"SNV","G","T","Homozygous",27,27,100,1,9,23,0.28,37.89,32,32,9,13,null,1,1,"no","T/T","No",1,103.58,"XP_971851.1:c.103G>T","XP_971851.1:p.Gly35Cys","LOC660535",660535,null,"660535 [Gene Symbol: LOC660535] [Locus Tag: TcasGA2_TC008030] [Chromosome: LG4] [Map Location: ] [Description: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10] [Gene Type: protein-coding]","NDUO42; LOC660535; TcasGA2_TC008030; Ndufa10"]
[394,"NC_007419.2",4250968,"SNV","G","T","Homozygous",25,25,100,1,14,15,0.48,38.56,29,29,12,19,null,1,1,"no","T/T","No",1,97.56,"XP_008192064.2:c.[1671G>T]; XP_015834444.1:c.[2370G>T]; XP_008192065.2:c.[2367G>T]","XP_008192064.2:p.[Leu557Phe]; XP_015834444.1:p.[Leu790Phe]; XP_008192065.2:p.[Leu789Phe]","LOC660983",660983,null,"660983 [Gene Symbol: LOC660983] [Locus Tag: TcasGA2_TC008037] [Chromosome: LG4] [Map Location: LG4|LG4] [Description: kinesin-like protein CG14535] [Gene Type: protein-coding]","TcasGA2_TC008037; LOC660983"]
[396,"NC_007419.2",4255297,"SNV","G","A","Homozygous",24,24,100,1,15,11,0.42,37.25,26,26,12,18,null,1,1,"no","A/A","No",1,94.52,"XP_972325.1:c.1387G>A","XP_972325.1:p.Asp463Asn","LOC661043",661043,null,"661043 [Gene Symbol: LOC661043] [Locus Tag: TcasGA2_TC008043] [Chromosome: LG4] [Map Location: ] [Description: nidogen-1] [Gene Type: protein-coding]","TcasGA2_TC008043; LOC661043"]
[397,"NC_007419.2",4400437,"SNV","A","C","Homozygous",27,27,100,1,8,20,0.29,37.67,28,28,11,14,null,1,1,"no","C/C","No",1,101.95,"XP_008192381.1:c.639T>G","XP_008192381.1:p.Ile213Met","LOC662115",662115,null,"662115 [Gene Symbol: LOC662115] [Locus Tag: TcasGA2_TC007444] [Chromosome: LG4] [Map Location: ] [Description: eukaryotic translation initiation factor 5B] [Gene Type: protein-coding]","LOC662115; TcasGA2_TC007444"]
[399,"NC_007419.2","4416484..4416485","MNV","TT","GG","Homozygous",21,21,100,1,19,2,0.1,37.52,21,21,6,17,null,1,1,"no","GG/GG","No",1,200,"XP_015834911.1:c.[413_414delTTinsGG]; XP_015834912.1:c.[413_414delTTinsGG]; XP_015834913.1:c.[413_414delTTinsGG]; XP_008192095.1:c.[413_414delTTinsGG]; XP_973457.2:c.[413_414delTTinsGG]","XP_015834911.1:p.[Phe138Trp]; XP_015834912.1:p.[Phe138Trp]; XP_015834913.1:p.[Phe138Trp]; XP_008192095.1:p.[Phe138Trp]; XP_973457.2:p.[Phe138Trp]","LOC662253",662253,null,"662253 [Gene Symbol: LOC662253] [Locus Tag: TcasGA2_TC008059] [Chromosome: LG4] [Map Location: ] [Description: protein tumorous imaginal discs, mitochondrial] [Gene Type: protein-coding]","LOC662253; TcasGA2_TC008059"]
[400,"NC_007419.2",4481335,"SNV","C","T","Homozygous",20,20,100,1,9,18,0.33,38.25,27,27,9,6,null,1,1,"no","T/T","No",1,82.52,"XP_015835053.1:c.2264G>A","XP_015835053.1:p.Arg755Gln","LOC662572",662572,null,"662572 [Gene Symbol: LOC662572] [Locus Tag: TcasGA2_TC007440] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC662572] [Gene Type: protein-coding]","TcasGA2_TC007440; LOC662572"]
[402,"NC_007419.2",4679274,"SNV","T","A","Homozygous",26,26,100,1,17,14,0.45,36.65,31,31,8,13,null,1,1,"no","A/A","No",1,100.54,"XP_008192115.1:c.[1210A>T]; XP_008192117.1:c.[1132A>T]; XP_008192116.1:c.[1204A>T]; XP_008192113.1:c.[1210A>T]","XP_008192115.1:p.[Thr404Ser]; XP_008192117.1:p.[Thr378Ser]; XP_008192116.1:p.[Thr402Ser]; XP_008192113.1:p.[Thr404Ser]","LOC663093",663093,null,"663093 [Gene Symbol: LOC663093] [Locus Tag: TcasGA2_TC007427] [Chromosome: LG4] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","TcasGA2_TC007427; LOC663093"]
[403,"NC_007419.2",5026096,"SNV","G","A","Heterozygous",19,37,51.35,1,13,6,0.32,37.79,19,41,9,14,0.9,0.22,0.66,"no","A/G","No",1,140.85,"XP_015834326.1:c.2591G>A","XP_015834326.1:p.Ser864Asn","LOC663765, LOC663775","663765 , 663775",null,"663765 [Gene Symbol: LOC663765] [Locus Tag: TcasGA2_TC007403] [Chromosome: LG4] [Map Location: ] [Description: probable glutamine-dependent NAD(+) synthetase] [Gene Type: protein-coding] || 663775 [Gene Symbol: LOC663775] [Locus Tag: TcasGA2_TC008100] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC663775] [Gene Type: protein-coding]","TcasGA2_TC007403; LOC663765 || LOC663775; TcasGA2_TC008100"]
[404,"NC_007419.2",5029139,"SNV","A","G","Homozygous",21,21,100,1,6,15,0.29,38.05,21,21,6,12,null,1,1,"no","G/G","No",1,83.89,"XP_015834326.1:c.[4033A>G]; XP_974925.1:c.[319A>G]","XP_015834326.1:p.[Ile1345Val]; XP_974925.1:p.[Ile107Val]","LOC663765, LOC663775, LOC663797","663765 , 663775 , 663797",null,"663765 [Gene Symbol: LOC663765] [Locus Tag: TcasGA2_TC007403] [Chromosome: LG4] [Map Location: ] [Description: probable glutamine-dependent NAD(+) synthetase] [Gene Type: protein-coding] || 663775 [Gene Symbol: LOC663775] [Locus Tag: TcasGA2_TC008100] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC663775] [Gene Type: protein-coding] || 663797 [Gene Symbol: LOC663797] [Locus Tag: TcasGA2_TC008102] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC663797] [Gene Type: protein-coding]","TcasGA2_TC007403; LOC663765 || LOC663775; TcasGA2_TC008100 || TcasGA2_TC008102; LOC663797"]
[407,"NC_007419.2",5266883,"SNV","G","T","Homozygous",21,21,100,1,11,12,0.48,37.9,23,23,12,14,null,1,1,"no","T/T","No",1,85.52,"XP_008192161.1:c.380G>T","XP_008192161.1:p.Ser127Ile","LOC103312674",103312674,null,"103312674 [Gene Symbol: LOC103312674] [Locus Tag: TcasGA2_TC008117] [Chromosome: LG4] [Map Location: ] [Description: cilia- and flagella-associated protein 97] [Gene Type: protein-coding]","LOC103312674; TcasGA2_TC008117"]
[408,"NC_007419.2",5373504,"SNV","T","C","Homozygous",21,21,100,1,10,15,0.4,35.9,25,25,5,13,null,1,1,"no","C/C","No",1,83.89,"XP_975330.1:c.1810A>G","XP_975330.1:p.Met604Val","LOC664225",664225,null,"664225 [Gene Symbol: LOC664225] [Locus Tag: TcasGA2_TC007375] [Chromosome: LG4] [Map Location: ] [Description: ESF1 homolog] [Gene Type: protein-coding]","TcasGA2_TC007375; LOC664225"]
[409,"NC_007419.2",5381041,"SNV","C","A","Homozygous",20,20,100,1,17,9,0.35,37.9,26,26,11,13,null,1,1,"no","A/A","No",1,82.49,"XP_008192188.1:c.[910G>T]; XP_015834695.1:c.[958G>T]; XP_015834693.1:c.[958G>T]; XP_015834697.1:c.[958G>T]; XP_015834698.1:c.[958G>T]; XP_015834696.1:c.[958G>T]; XP_015834694.1:c.[958G>T]","XP_008192188.1:p.[Asp304Tyr]; XP_015834695.1:p.[Asp320Tyr]; XP_015834693.1:p.[Asp320Tyr]; XP_015834697.1:p.[Asp320Tyr]; XP_015834698.1:p.[Asp320Tyr]; XP_015834696.1:p.[Asp320Tyr]; XP_015834694.1:p.[Asp320Tyr]","LOC103312682",103312682,null,"103312682 [Gene Symbol: LOC103312682] [Locus Tag: TcasGA2_TC007373] [Chromosome: LG4] [Map Location: ] [Description: nuclear RNA export factor 2] [Gene Type: protein-coding]","LOC103312682; TcasGA2_TC007373"]
[410,"NC_007419.2",5546234,"SNV","C","T","Heterozygous",12,20,60,1,12,2,0.14,37.75,14,22,6,11,1.62,0.66,0.94,"no","C/T","No",1,60.94,"XP_975382.1:c.877G>A","XP_975382.1:p.Val293Ile","LOC664282",664282,null,"664282 [Gene Symbol: LOC664282] [Locus Tag: TcasGA2_TC007369] [Chromosome: LG4] [Map Location: ] [Description: D-beta-hydroxybutyrate dehydrogenase, mitochondrial] [Gene Type: protein-coding]","LOC664282; TcasGA2_TC007369"]
[412,"NC_007419.2",5806835,"SNV","C","T","Homozygous",21,21,100,1,12,9,0.43,39.57,21,21,5,18,null,1,1,"no","T/T","No",1,85.53,"XP_015834681.1:c.[1093+300G>A]; XP_975467.2:c.[1283G>A]","XP_975467.2:p.Ser428Asn","LOC664366",664366,null,"664366 [Gene Symbol: LOC664366] [Locus Tag: TcasGA2_TC007350] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized protein KIAA0930 homolog] [Gene Type: protein-coding]","LOC664366; TcasGA2_TC007350"]
[413,"NC_007419.2","5866146..5866148","Deletion","GAG","-","Heterozygous",8,25,32,1,4,4,0.5,37.12,8,26,4,5,1.81,0.25,0.93,"no","complex","No",1,200,"XP_008192228.1:c.1177_1179delGAG","XP_008192228.1:p.Glu394del","LOC664401",664401,null,"664401 [Gene Symbol: LOC664401] [Locus Tag: TcasGA2_TC008156] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC664401; TcasGA2_TC008156"]
[415,"NC_007419.2",6225082,"SNV","G","A","Homozygous",20,20,100,1,16,11,0.41,38.05,27,27,14,13,null,1,1,"no","A/A","No",1,79.48,"XP_015834502.1:c.[295-20866G>A]; XP_015834501.1:c.[295-20866G>A]; XP_015834500.1:c.[295-20866G>A]; XP_015834503.1:c.[295-20866G>A]; XP_008192267.1:c.[869C>T]; XP_015834498.1:c.[295-20866G>A]; XP_008192263.1:c.[295-20866G>A]; XP_015834499.1:c.[295-20866G>A]","XP_008192267.1:p.Ala290Val","LOC664485, LOC664475","664485 , 664475",null,"664485 [Gene Symbol: LOC664485] [Locus Tag: TcasGA2_TC008184] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized protein CG43867] [Gene Type: protein-coding] || 664475 [Gene Symbol: LOC664475] [Locus Tag: TcasGA2_TC007314] [Chromosome: LG4] [Map Location: ] [Description: probable cytochrome P450 6a14] [Gene Type: protein-coding]","TcasGA2_TC008184; LOC664485 || CYP6BQ5; LOC664475; TcasGA2_TC007314"]
[416,"NC_007419.2",6325683,"SNV","C","G","Heterozygous",11,24,45.83,1,3,8,0.27,38.09,11,28,5,5,1.36,0.22,0.37,"no","C/G","No",1,86.86,"XP_975598.1:c.615G>C","XP_975598.1:p.Leu205Phe","LOC664504",664504,null,"664504 [Gene Symbol: LOC664504] [Locus Tag: TcasGA2_TC007301] [Chromosome: LG4] [Map Location: ] [Description: GAS2-like protein 2] [Gene Type: protein-coding]","LOC664504; TcasGA2_TC007301"]
[418,"NC_007419.2",6713788,"SNV","C","G","Heterozygous",5,20,25,1,5,0,0,35,5,26,2,5,0.87,{"v":0.00202,"d":"2.02E-03"},0.15,"no","complex","No",1,150.51,"XP_001816522.1:c.791C>G","XP_001816522.1:p.Ala264Gly","LOC100142439",100142439,null,"100142439 [Gene Symbol: LOC100142439] [Locus Tag: TcasGA2_TC008208] [Chromosome: LG4] [Map Location: ] [Description: elastin] [Gene Type: protein-coding]","LOC100142439; TcasGA2_TC008208"]
[419,"NC_007419.2",6809265,"SNV","T","A","Heterozygous",11,27,40.74,1,0,11,0,38.82,11,27,3,6,3.4,0.05,1,"no","A/T","No",1,78.08,"XP_008192338.1:c.[617T>A]; XP_015834740.1:c.[590T>A]; XP_008192337.1:c.[617T>A]; XP_015834739.1:c.[617T>A]; XP_008192336.1:c.[617T>A]","XP_008192338.1:p.[Val206Glu]; XP_015834740.1:p.[Val197Glu]; XP_008192337.1:p.[Val206Glu]; XP_015834739.1:p.[Val206Glu]; XP_008192336.1:p.[Val206Glu]","LOC100142371",100142371,null,"100142371 [Gene Symbol: LOC100142371] [Locus Tag: TcasGA2_TC008212] [Chromosome: LG4] [Map Location: ] [Description: DNA-directed RNA polymerase I subunit rpa1] [Gene Type: protein-coding]","TcasGA2_TC008212; LOC100142371"]
[421,"NC_007419.2",7076658,"SNV","G","T","Homozygous",25,25,100,1,8,19,0.3,37.64,27,27,5,10,null,1,1,"no","T/T","No",1,97.57,"XP_966723.1:c.259G>T","XP_966723.1:p.Ala87Ser","LOC655120",655120,null,"655120 [Gene Symbol: LOC655120] [Locus Tag: TcasGA2_TC008229] [Chromosome: LG4] [Map Location: ] [Description: elastin] [Gene Type: protein-coding]","TcasGA2_TC008229; LOC655120"]
[423,"NC_007419.2",7076682,"SNV","G","A","Homozygous",22,22,100,1,13,11,0.46,36.68,24,24,5,13,null,1,1,"no","A/A","No",1,88.51,"XP_966723.1:c.283G>A","XP_966723.1:p.Val95Ile","LOC655120",655120,null,"655120 [Gene Symbol: LOC655120] [Locus Tag: TcasGA2_TC008229] [Chromosome: LG4] [Map Location: ] [Description: elastin] [Gene Type: protein-coding]","TcasGA2_TC008229; LOC655120"]
[424,"NC_007419.2",7085155,"SNV","G","C","Heterozygous",14,25,56,1,11,5,0.31,37.29,16,27,7,11,-0.08,0.3,0.78,"no","C/G","No",1,84.04,"XP_008192496.2:c.218C>G","XP_008192496.2:p.Thr73Ser","LOC103312787",103312787,null,"103312787 [Gene Symbol: LOC103312787] [Locus Tag: TcasGA2_TC007239] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312787] [Gene Type: protein-coding]","TcasGA2_TC007239; LOC103312787"]
[426,"NC_007419.2",7176820,"SNV","A","C","Homozygous",22,22,100,1,18,4,0.18,38.91,22,22,10,13,null,1,1,"no","C/C","No",1,86.9,"XP_015834643.1:c.[229T>G]; XP_015834640.1:c.[229T>G]; XP_015834645.1:c.[229T>G]; XP_015834642.1:c.[229T>G]; XP_015834644.1:c.[229T>G]; XP_015834641.1:c.[229T>G]; XP_015834646.1:c.[229T>G]; XP_015834639.1:c.[229T>G]; XP_015834647.1:c.[229T>G]; XP_015834638.1:c.[229T>G]","XP_015834643.1:p.[Leu77Val]; XP_015834640.1:p.[Leu77Val]; XP_015834645.1:p.[Leu77Val]; XP_015834642.1:p.[Leu77Val]; XP_015834644.1:p.[Leu77Val]; XP_015834641.1:p.[Leu77Val]; XP_015834646.1:p.[Leu77Val]; XP_015834639.1:p.[Leu77Val]; XP_015834647.1:p.[Leu77Val]; XP_015834638.1:p.[Leu77Val]","LOC656932",656932,null,"656932 [Gene Symbol: LOC656932] [Locus Tag: TcasGA2_TC007231] [Chromosome: LG4] [Map Location: ] [Description: mucin-2] [Gene Type: protein-coding]","TcasGA2_TC007231; LOC656932"]
[427,"NC_007419.2",7492753,"SNV","G","A","Homozygous",25,25,100,1,20,5,0.2,37.68,25,25,6,14,null,1,1,"no","A/A","No",1,97.53,"XP_008192545.1:c.[1576G>A]; XP_008192546.1:c.[709-974G>A]","XP_008192545.1:p.Glu526Lys","LOC659455, LOC103312801","659455 , 103312801",null,"659455 [Gene Symbol: LOC659455] [Locus Tag: TcasGA2_TC008263] [Chromosome: LG4] [Map Location: ] [Description: kinesin 5D] [Gene Type: protein-coding] || 103312801 [Gene Symbol: LOC103312801] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: kinesin-like protein KIF11-A] [Gene Type: protein-coding]","LOC659455; kinesin-5D; TcasGA2_TC008263 || LOC103312801"]
[428,"NC_007419.2",7492862,"SNV","C","T","Homozygous",34,34,100,1,12,24,0.33,35.56,36,36,15,12,null,1,1,"no","T/T","No",1,124.65,"XP_008192546.1:c.[709-865C>T]; XP_008192545.1:c.[1685C>T]","XP_008192545.1:p.Ala562Val","LOC659455, LOC103312801","659455 , 103312801",null,"659455 [Gene Symbol: LOC659455] [Locus Tag: TcasGA2_TC008263] [Chromosome: LG4] [Map Location: ] [Description: kinesin 5D] [Gene Type: protein-coding] || 103312801 [Gene Symbol: LOC103312801] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: kinesin-like protein KIF11-A] [Gene Type: protein-coding]","LOC659455; kinesin-5D; TcasGA2_TC008263 || LOC103312801"]
[429,"NC_007419.2",7501007,"SNV","C","G","Heterozygous",17,28,60.71,1,3,16,0.16,38.82,19,31,6,8,3.67,0.27,0.73,"no","C/G","No",1,75.99,"XP_970964.1:c.797C>G","XP_970964.1:p.Thr266Ser","LOC659579",659579,null,"659579 [Gene Symbol: LOC659579] [Locus Tag: TcasGA2_TC008264] [Chromosome: LG4] [Map Location: ] [Description: probable nucleoporin Nup58] [Gene Type: protein-coding]","LOC659579; TcasGA2_TC008264"]
[430,"NC_007419.2",7501031,"SNV","C","T","Homozygous",31,31,100,1,8,23,0.26,38.23,31,31,12,15,null,1,1,"no","T/T","No",1,115.61,"XP_970964.1:c.821C>T","XP_970964.1:p.Ala274Val","LOC659579",659579,null,"659579 [Gene Symbol: LOC659579] [Locus Tag: TcasGA2_TC008264] [Chromosome: LG4] [Map Location: ] [Description: probable nucleoporin Nup58] [Gene Type: protein-coding]","LOC659579; TcasGA2_TC008264"]
[433,"NC_007419.2",7634178,"SNV","C","T","Homozygous",21,21,100,1,12,14,0.46,38.57,26,26,11,17,null,1,1,"no","T/T","No",1,85.53,"XP_976019.1:c.[2135G>A]; XP_015834620.1:c.[2171G>A]; XP_967042.1:c.[2135G>A]; XP_015834618.1:c.[2213G>A]; XP_015834619.1:c.[2213G>A]","XP_976019.1:p.[Ser712Asn]; XP_015834620.1:p.[Ser724Asn]; XP_967042.1:p.[Ser712Asn]; XP_015834618.1:p.[Ser738Asn]; XP_015834619.1:p.[Ser738Asn]","LOC659289",659289,null,"659289 [Gene Symbol: LOC659289] [Locus Tag: TcasGA2_TC007200] [Chromosome: LG4] [Map Location: ] [Description: probable phosphorylase b kinase regulatory subunit alpha] [Gene Type: protein-coding]","TcasGA2_TC007200; LOC659289"]
[434,"NC_007419.2",7868873,"SNV","A","G","Homozygous",21,21,100,1,8,16,0.33,37.19,24,24,12,13,null,1,1,"no","G/G","No",1,83.88,"XP_015834679.1:c.2045A>G","XP_015834679.1:p.Lys682Arg","LOC103312777",103312777,null,"103312777 [Gene Symbol: LOC103312777] [Locus Tag: TcasGA2_TC008283] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC103312777] [Gene Type: protein-coding]","TcasGA2_TC008283; LOC103312777"]
[435,"NC_007419.2",7880812,"SNV","T","C","Homozygous",24,24,100,1,9,19,0.32,36.12,28,28,8,9,null,1,1,"no","C/C","No",1,92.92,"XP_015834337.1:c.359A>G","XP_015834337.1:p.Asn120Ser","LOC661718",661718,null,"661718 [Gene Symbol: LOC661718] [Locus Tag: TcasGA2_TC007187] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC661718] [Gene Type: protein-coding]","LOC661718; TcasGA2_TC007187"]
[436,"NC_007419.2",7882523,"SNV","G","A","Homozygous",21,21,100,1,9,16,0.36,38.95,25,25,11,11,null,1,1,"no","A/A","No",1,85.5,"XP_001813143.1:c.122C>T","XP_001813143.1:p.Pro41Leu","LOC661792",661792,null,"661792 [Gene Symbol: LOC661792] [Locus Tag: TcasGA2_TC007185] [Chromosome: LG4] [Map Location: ] [Description: lipase 3] [Gene Type: protein-coding]","LOC661792; TcasGA2_TC007185"]
[438,"NC_007419.2",7889126,"SNV","G","A","Homozygous",21,21,100,1,19,7,0.27,37.71,26,26,8,11,null,1,1,"no","A/A","No",1,85.5,"XP_008192578.1:c.1132C>T","XP_008192578.1:p.Pro378Ser","LOC661923",661923,null,"661923 [Gene Symbol: LOC661923] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: lipase 3-like] [Gene Type: protein-coding]","LOC661923"]
[439,"NC_007419.2",8129063,"SNV","C","T","Homozygous",25,25,100,1,23,15,0.39,35.96,38,38,11,12,null,1,1,"no","T/T","No",1,94.56,"XP_973905.3:c.902C>T","XP_973905.3:p.Ser301Phe","LOC662731",662731,null,"662731 [Gene Symbol: LOC662731] [Locus Tag: TcasGA2_TC008301] [Chromosome: LG4] [Map Location: ] [Description: aldose reductase] [Gene Type: protein-coding]","LOC662731; TcasGA2_TC008301"]
[440,"NC_007419.2",8141668,"SNV","T","C","Homozygous",26,26,100,1,12,17,0.41,38.81,29,29,13,14,null,1,1,"no","C/C","No",1,98.93,"XP_001815591.2:c.326A>G","XP_001815591.2:p.Glu109Gly","LOC100142467",100142467,null,"100142467 [Gene Symbol: LOC100142467] [Locus Tag: TcasGA2_TC007168] [Chromosome: LG4] [Map Location: ] [Description: gastrula zinc finger protein XlCGF28.1] [Gene Type: protein-coding]","LOC100142467; TcasGA2_TC007168"]
[441,"NC_007419.2","8282954..8282955","MNV","CG","TA","Heterozygous",7,22,31.82,1,6,4,0.4,39,10,25,7,4,0.28,0.25,0.58,"no","complex","No",1,200,"XP_974173.2:c.[590-10932_590-10931delCGinsTA]; XP_015835010.1:c.[280+444_280+445delCGinsTA]; XP_015835009.1:c.[678_679delCGinsTA]","XP_015835009.1:p.Gly227Arg","LOC663015, LOC107397843","663015 , 107397843",null,"663015 [Gene Symbol: LOC663015] [Locus Tag: TcasGA2_TC008308] [Chromosome: LG4] [Map Location: ] [Description: carbonic anhydrase-related protein 10] [Gene Type: protein-coding] || 107397843 [Gene Symbol: LOC107397843] [Locus Tag: TcasGA2_TC031112] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397843] [Gene Type: protein-coding]","LOC663015; TcasGA2_TC008308 || TcasGA2_TC031112; LOC107397843"]
[442,"NC_007419.2",8614605,"SNV","T","C","Homozygous",20,20,100,1,9,16,0.36,37.75,25,25,9,13,null,1,1,"no","C/C","No",1,80.88,"XP_008192663.1:c.[1918A>G]; XP_008192662.1:c.[1918A>G]; XP_015834970.1:c.[1918A>G]; XP_015834969.1:c.[1918A>G]","XP_008192663.1:p.[Thr640Ala]; XP_008192662.1:p.[Thr640Ala]; XP_015834970.1:p.[Thr640Ala]; XP_015834969.1:p.[Thr640Ala]","LOC663713",663713,null,"663713 [Gene Symbol: LOC663713] [Locus Tag: TcasGA2_TC007147] [Chromosome: LG4] [Map Location: ] [Description: harmonin] [Gene Type: protein-coding]","TcasGA2_TC007147; LOC663713"]
[444,"NC_007419.2",8691213,"SNV","G","A","Heterozygous",18,37,48.65,1,16,7,0.3,38.44,23,44,11,13,0.56,0.94,1,"no","A/G","No",1,139.13,"XP_015834829.1:c.1189G>A","XP_015834829.1:p.Val397Ile","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[446,"NC_007419.2",8691243,"SNV","G","A","Heterozygous",14,33,42.42,1,8,6,0.43,39.71,14,42,10,10,1.6,0.92,0.97,"no","A/G","No",1,99.47,"XP_015834829.1:c.1219G>A","XP_015834829.1:p.Val407Ile","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[447,"NC_007419.2",8691265,"SNV","G","A","Heterozygous",19,36,52.78,1,16,6,0.27,37.89,22,44,11,12,-2.04,0.49,0.76,"no","A/G","No",1,131.21,"XP_015834829.1:c.1241G>A","XP_015834829.1:p.Gly414Asp","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[448,"NC_007419.2",8691333,"SNV","C","T","Heterozygous",15,53,28.3,1,11,5,0.31,38.07,16,68,9,13,0.08,0.04,0.81,"no","C/T","No",1,59.31,"XP_015834829.1:c.1309C>T","XP_015834829.1:p.Pro437Ser","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[449,"NC_007419.2",8691396,"SNV","G","A","Heterozygous",12,40,30,1,7,8,0.47,37.83,15,51,7,7,1.03,0.29,0.8,"no","A/G","No",1,54.59,"XP_015834829.1:c.1372G>A","XP_015834829.1:p.Gly458Ser","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[450,"NC_007419.2",8691412,"SNV","T","G","Homozygous",35,35,100,1,15,30,0.33,39.11,45,45,18,21,null,1,1,"no","G/G","No",1,123.01,"XP_015834829.1:c.1388T>G","XP_015834829.1:p.Leu463Arg","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[451,"NC_007419.2",8691416,"SNV","A","T","Heterozygous",19,35,54.29,1,5,17,0.23,39,22,41,8,11,-0.23,0.62,1,"no","A/T","No",1,119.67,"XP_015834829.1:c.1392A>T","XP_015834829.1:p.Leu464Phe","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[452,"NC_007419.2",8691520,"SNV","A","G","Homozygous",30,32,93.75,1,17,16,0.48,38.33,33,35,15,18,null,0.98,1,"no","G/G","No",1,57.11,"XP_015834829.1:c.1496A>G","XP_015834829.1:p.Tyr499Cys","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[453,"NC_007419.2",8691523,"SNV","C","T","Heterozygous",15,32,46.88,1,13,5,0.28,38,18,35,9,10,-1.11,0.7,0.64,"no","C/T","No",1,114.93,"XP_015834829.1:c.1499C>T","XP_015834829.1:p.Ser500Phe","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[454,"NC_007419.2",8691532,"SNV","T","C","Homozygous",29,31,93.55,1,15,16,0.48,38.79,31,34,15,17,null,1,1,"no","C/C","No",1,51.67,"XP_015834829.1:c.1508T>C","XP_015834829.1:p.Leu503Pro","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[455,"NC_007419.2",8691538,"SNV","G","A","Heterozygous",15,37,40.54,1,10,5,0.33,38.27,15,38,10,10,-1.3,0.07,0.9,"no","A/G","No",1,101.02,"XP_015834829.1:c.1514G>A","XP_015834829.1:p.Trp505*","LOC107397807",107397807,null,"107397807 [Gene Symbol: LOC107397807] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: probable DNA polymerase] [Gene Type: protein-coding]","LOC107397807"]
[458,"NC_007419.2","8916227..8916228","MNV","AG","GA","Homozygous",20,20,100,1,2,20,0.09,38.1,22,22,9,9,null,1,1,"no","GA/GA","No",1,200,"XP_975065.2:c.[41-1888_41-1887delAGinsGA]; XP_015834885.1:c.[1982_1983delCTinsTC]","XP_015834885.1:p.Ser661Phe","LOC663945, LOC100142143","663945 , 100142143",null,"663945 [Gene Symbol: LOC663945] [Locus Tag: TcasGA2_TC008349] [Chromosome: LG4] [Map Location: ] [Description: RWD domain-containing protein 2A] [Gene Type: protein-coding] || 100142143 [Gene Symbol: LOC100142143] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC100142143] [Gene Type: protein-coding]","LOC663945; TcasGA2_TC008349 || LOC100142143"]
[459,"NC_007419.2",8951363,"SNV","G","A","Homozygous",27,27,100,1,19,10,0.34,39.26,29,29,13,17,null,1,1,"no","A/A","No",1,103.55,"XP_008192488.1:c.[2947G>A]; XP_015834653.1:c.[2878G>A]; XP_015834652.1:c.[2878G>A]","XP_008192488.1:p.[Ala983Thr]; XP_015834653.1:p.[Ala960Thr]; XP_015834652.1:p.[Ala960Thr]","LOC103312782, LOC107397770","103312782 , 107397770",null,"103312782 [Gene Symbol: LOC103312782] [Locus Tag: TcasGA2_TC008351] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding] || 107397770 [Gene Symbol: LOC107397770] [Locus Tag: TcasGA2_TC008352] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397770] [Gene Type: protein-coding]","TcasGA2_TC008351; LOC103312782 || TcasGA2_TC008352; LOC107397770"]
[460,"NC_007419.2",8951376,"SNV","A","C","Homozygous",26,26,100,1,17,16,0.48,37.65,33,33,13,14,null,1,1,"no","C/C","No",1,98.94,"XP_015834653.1:c.[2891A>C]; XP_015834652.1:c.[2891A>C]; XP_008192488.1:c.[2960A>C]","XP_015834653.1:p.[Asn964Thr]; XP_015834652.1:p.[Asn964Thr]; XP_008192488.1:p.[Asn987Thr]","LOC103312782, LOC107397770","103312782 , 107397770",null,"103312782 [Gene Symbol: LOC103312782] [Locus Tag: TcasGA2_TC008351] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding] || 107397770 [Gene Symbol: LOC107397770] [Locus Tag: TcasGA2_TC008352] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397770] [Gene Type: protein-coding]","TcasGA2_TC008351; LOC103312782 || TcasGA2_TC008352; LOC107397770"]
[461,"NC_007419.2",8951421,"SNV","C","T","Homozygous",20,20,100,1,11,15,0.42,37.6,26,26,10,14,null,1,1,"no","T/T","No",1,82.51,"XP_015834653.1:c.[2936C>T]; XP_008192488.1:c.[3005C>T]; XP_015834652.1:c.[2936C>T]","XP_015834653.1:p.[Thr979Met]; XP_008192488.1:p.[Thr1002Met]; XP_015834652.1:p.[Thr979Met]","LOC103312782, LOC107397770","103312782 , 107397770",null,"103312782 [Gene Symbol: LOC103312782] [Locus Tag: TcasGA2_TC008351] [Chromosome: LG4] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding] || 107397770 [Gene Symbol: LOC107397770] [Locus Tag: TcasGA2_TC008352] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC107397770] [Gene Type: protein-coding]","TcasGA2_TC008351; LOC103312782 || TcasGA2_TC008352; LOC107397770"]
[462,"NC_007419.2",9229664,"SNV","T","A","Homozygous",23,23,100,1,9,14,0.39,38.09,23,23,14,12,null,1,1,"no","A/A","No",1,91.52,"XP_015834690.1:c.[2870A>T]; XP_015834691.1:c.[2870A>T]","XP_015834690.1:p.[Asn957Ile]; XP_015834691.1:p.[Asn957Ile]","LOC664279",664279,null,"664279 [Gene Symbol: LOC664279] [Locus Tag: TcasGA2_TC007111] [Chromosome: LG4] [Map Location: ] [Description: YLP motif-containing protein 1] [Gene Type: protein-coding]","TcasGA2_TC007111; LOC664279"]
[463,"NC_007419.2",9647397,"SNV","A","G","Homozygous",23,23,100,1,19,9,0.32,35.61,28,28,11,14,null,1,1,"no","G/G","No",1,89.89,"XP_967661.1:c.112A>G","XP_967661.1:p.Thr38Ala","LOC656012",656012,null,"656012 [Gene Symbol: LOC656012] [Locus Tag: ] [Chromosome: LG4] [Map Location: ] [Description: uncharacterized LOC656012] [Gene Type: protein-coding]","LOC656012"]
[466,"NC_007419.2",9711036,"SNV","T","G","Heterozygous",11,20,55,1,7,6,0.46,36,13,22,3,8,-2.24,0.81,1,"no","G/T","No",1,67.26,"XP_008192893.2:c.[101A>C]; XP_015834347.1:c.[101A>C]","XP_008192893.2:p.[Asp34Ala]; XP_015834347.1:p.[Asp34Ala]","LOC656933",656933,null,"656933 [Gene Symbol: LOC656933] [Locus Tag: TcasGA2_TC007090] [Chromosome: LG4] [Map Location: ] [Description: nose resistant to fluoxetine protein 6] [Gene Type: protein-coding]","LOC656933; TcasGA2_TC007090"]
[468,"NC_007419.2",9808833,"SNV","G","T","Homozygous",26,26,100,1,18,24,0.43,37.62,42,42,14,12,null,1,1,"no","T/T","No",1,100.57,"XP_001809578.1:c.[211G>T]; XP_008192769.1:c.[75+1013C>A]","XP_001809578.1:p.Val71Leu","LOC657019, LOC100142512","657019 , 100142512",null,"657019 [Gene Symbol: LOC657019] [Locus Tag: TcasGA2_TC007088] [Chromosome: LG4] [Map Location: ] [Description: apoptosis-stimulating of p53 protein 1] [Gene Type: protein-coding] || 100142512 [Gene Symbol: LOC100142512] [Locus Tag: TcasGA2_TC008401] [Chromosome: LG4] [Map Location: ] [Description: cuticle protein CP14.6] [Gene Type: protein-coding]","LOC657019; TcasGA2_TC007088 || LOC100142512; TcasGA2_TC008401"]
[469,"NC_007419.2",9808843,"SNV","C","T","Homozygous",27,27,100,1,18,24,0.43,37.3,42,42,14,14,null,1,1,"no","T/T","No",1,103.58,"XP_008192769.1:c.[75+1003G>A]; XP_001809578.1:c.[221C>T]","XP_001809578.1:p.Ser74Phe","LOC657019, LOC100142512","657019 , 100142512",null,"657019 [Gene Symbol: LOC657019] [Locus Tag: TcasGA2_TC007088] [Chromosome: LG4] [Map Location: ] [Description: apoptosis-stimulating of p53 protein 1] [Gene Type: protein-coding] || 100142512 [Gene Symbol: LOC100142512] [Locus Tag: TcasGA2_TC008401] [Chromosome: LG4] [Map Location: ] [Description: cuticle protein CP14.6] [Gene Type: protein-coding]","LOC657019; TcasGA2_TC007088 || LOC100142512; TcasGA2_TC008401"]
[470,"NC_007419.2",9929165,"SNV","C","T","Heterozygous",9,21,42.86,1,3,6,0.33,38.78,9,21,2,5,1.42,0.23,0.99,"no","C/T","No",1,69.16,"XP_015834866.1:c.[2881G>A]; XP_008192801.1:c.[3022G>A]; XP_008192803.1:c.[3007G>A]","XP_015834866.1:p.[Val961Ile]; XP_008192801.1:p.[Val1008Ile]; XP_008192803.1:p.[Val1003Ile]","LOC658864",658864,null,"658864 [Gene Symbol: LOC658864] [Locus Tag: TcasGA2_TC007082] [Chromosome: LG4] [Map Location: ] [Description: disheveled-associated activator of morphogenesis 1] [Gene Type: protein-coding]","TcasGA2_TC007082; LOC658864"]
[471,"NC_007419.2",9933373,"SNV","A","G","Homozygous",28,28,100,1,15,14,0.48,37.14,29,29,7,19,null,1,1,"no","G/G","No",1,104.95,"XP_015834866.1:c.[1448T>C]; XP_008192801.1:c.[1589T>C]; XP_008192803.1:c.[1574T>C]","XP_015834866.1:p.[Val483Ala]; XP_008192801.1:p.[Val530Ala]; XP_008192803.1:p.[Val525Ala]","LOC658864",658864,null,"658864 [Gene Symbol: LOC658864] [Locus Tag: TcasGA2_TC007082] [Chromosome: LG4] [Map Location: ] [Description: disheveled-associated activator of morphogenesis 1] [Gene Type: protein-coding]","TcasGA2_TC007082; LOC658864"]
[475,"NC_007419.2","10916555..10916556","MNV","CT","TC","Heterozygous",8,23,34.78,1,2,6,0.25,39.56,8,29,2,3,null,0.05,0.95,"no","complex","No",1,200,"XP_973880.2:c.938_939delCTinsTC","XP_973880.2:p.Thr313Ile","LOC662704",662704,null,"662704 [Gene Symbol: LOC662704] [Locus Tag: TcasGA2_TC008460] [Chromosome: LG4] [Map Location: ] [Description: glycerate kinase] [Gene Type: protein-coding]","TcasGA2_TC008460; LOC662704"]
[476,"NC_007419.2",11097802,"SNV","A","T","Homozygous",22,22,100,1,7,16,0.3,39.23,23,23,10,11,null,1,1,"no","T/T","No",1,88.53,"XP_015834940.1:c.[343A>T]; XP_015834941.1:c.[343A>T]","XP_015834940.1:p.[Ser115Cys]; XP_015834941.1:p.[Ser115Cys]","Mt2",100142187,null,"100142187 [Gene Symbol: Mt2] [Locus Tag: TcasGA2_TC008469] [Chromosome: LG4] [Map Location: ] [Description: methyltransferase 2] [Gene Type: protein-coding]","Mt2; jhamt-l2; TcasGA2_TC008469"]
[477,"NC_007419.2",11424853,"SNV","G","A","Heterozygous",12,23,52.17,1,11,4,0.27,37.92,15,31,6,5,0.83,0.27,0.55,"no","A/G","No",1,90.49,"XP_015835028.1:c.[1894G>A]; XP_015835027.1:c.[1900G>A]; XP_015835029.1:c.[1849G>A]","XP_015835028.1:p.[Asp632Asn]; XP_015835027.1:p.[Asp634Asn]; XP_015835029.1:p.[Asp617Asn]","LOC663529",663529,null,"663529 [Gene Symbol: LOC663529] [Locus Tag: TcasGA2_TC008487] [Chromosome: LG4] [Map Location: ] [Description: double-stranded RNA-specific editase Adar] [Gene Type: protein-coding]","LOC663529; TcasGA2_TC008487"]
[478,"NC_007419.2",11515050,"SNV","G","C","Homozygous",21,21,100,1,10,14,0.42,37.48,24,24,10,11,null,1,1,"no","C/C","No",1,83.89,"XP_015834342.1:c.889C>G","XP_015834342.1:p.Gln297Glu","LOC103312883",103312883,null,"103312883 [Gene Symbol: LOC103312883] [Locus Tag: TcasGA2_TC007022] [Chromosome: LG4] [Map Location: ] [Description: piggyBac transposable element-derived protein 4] [Gene Type: protein-coding]","LOC103312883; TcasGA2_TC007022"]
[481,"NC_007419.2",12114095,"SNV","A","G","Homozygous",22,22,100,1,4,18,0.18,38.23,22,22,6,8,null,1,1,"no","G/G","No",1,86.9,"XP_008192443.1:c.[2410A>G]; XP_015835128.1:c.[1756A>G]","XP_008192443.1:p.[Arg804Gly]; XP_015835128.1:p.[Arg586Gly]","LOC657330, LOC657408","657330 , 657408",null,"657330 [Gene Symbol: LOC657330] [Locus Tag: TcasGA2_TC008519] [Chromosome: LG4] [Map Location: ] [Description: DNA polymerase subunit gamma-1, mitochondrial] [Gene Type: protein-coding] || 657408 [Gene Symbol: LOC657408] [Locus Tag: TcasGA2_TC008520] [Chromosome: LG4] [Map Location: ] [Description: probable RNA-binding protein EIF1AD] [Gene Type: protein-coding]","LOC657330; TcasGA2_TC008519 || TcasGA2_TC008520; LOC657408"]
[482,"NC_007420.3",489046,"SNV","T","C","Homozygous",20,20,100,1,14,9,0.39,35.65,23,23,6,12,null,1,1,"no","C/C","No",1,80.88,"XP_008192910.2:c.283A>G","XP_008192910.2:p.Arg95Gly","LOC658423",658423,null,"658423 [Gene Symbol: LOC658423] [Locus Tag: TcasGA2_TC013905] [Chromosome: LG5] [Map Location: ] [Description: dnaJ protein homolog 1] [Gene Type: protein-coding]","LOC658423; TcasGA2_TC013905"]
[483,"NC_007420.3",1711116,"SNV","G","T","Heterozygous",10,20,50,1,10,0,0,39.4,10,20,1,6,0.49,0.12,0.22,"no","G/T","No",1,79.33,"XP_008199327.1:c.[639C>A]; XP_008199326.1:c.[639C>A]; XP_008199325.1:c.[639C>A]; XP_015835546.1:c.[639C>A]","XP_008199327.1:p.[Phe213Leu]; XP_008199326.1:p.[Phe213Leu]; XP_008199325.1:p.[Phe213Leu]; XP_015835546.1:p.[Phe213Leu]","LOC103314630",103314630,null,"103314630 [Gene Symbol: LOC103314630] [Locus Tag: TcasGA2_TC010898] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314630; TcasGA2_TC010898"]
[484,"NC_007420.3",1901261,"SNV","G","A","Homozygous",22,22,100,1,17,7,0.29,38.18,24,24,11,13,null,1,1,"no","A/A","No",1,88.51,"XP_970755.2:c.1529G>A","XP_970755.2:p.Ser510Asn","LOC659345",659345,null,"659345 [Gene Symbol: LOC659345] [Locus Tag: TcasGA2_TC010952] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC659345] [Gene Type: protein-coding]","TcasGA2_TC010952; LOC659345"]
[485,"NC_007420.3","1901382..1901383","MNV","GA","AG","Homozygous",24,24,100,1,14,12,0.46,38.37,26,26,11,14,null,1,1,"no","AG/AG","No",1,200,"XP_970755.2:c.1650_1651delGAinsAG","XP_970755.2:p.Ile551Val","LOC659345",659345,null,"659345 [Gene Symbol: LOC659345] [Locus Tag: TcasGA2_TC010952] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC659345] [Gene Type: protein-coding]","TcasGA2_TC010952; LOC659345"]
[486,"NC_007420.3",2168970,"SNV","T","C","Homozygous",29,29,100,1,9,23,0.28,37.48,32,32,9,18,null,1,1,"no","C/C","No",1,107.96,"XP_966990.1:c.125T>C","XP_966990.1:p.Ile42Thr","LOC655357",655357,null,"655357 [Gene Symbol: LOC655357] [Locus Tag: TcasGA2_TC013884] [Chromosome: LG5] [Map Location: ] [Description: ATP-binding cassette sub-family F member 2] [Gene Type: protein-coding]","TcasGA2_TC013884; LOC655357"]
[487,"NC_007420.3",2578354,"SNV","C","T","Homozygous",21,21,100,1,13,19,0.41,38.67,32,32,11,11,null,1,1,"no","T/T","No",1,85.53,"XP_968359.1:c.2239C>T","XP_968359.1:p.Leu747Phe","LOC656759",656759,null,"656759 [Gene Symbol: LOC656759] [Locus Tag: TcasGA2_TC013932] [Chromosome: LG5] [Map Location: ] [Description: ubiquitin-protein ligase E3C] [Gene Type: protein-coding]","TcasGA2_TC013932; LOC656759"]
[488,"NC_007420.3",2610619,"SNV","A","G","Homozygous",21,21,100,1,9,14,0.39,37.52,23,23,12,11,null,1,1,"no","G/G","No",1,83.89,"XP_968889.1:c.1469A>G","XP_968889.1:p.Asn490Ser","LOC657331",657331,null,"657331 [Gene Symbol: LOC657331] [Locus Tag: TcasGA2_TC013937] [Chromosome: LG5] [Map Location: ] [Description: large subunit GTPase 1 homolog] [Gene Type: protein-coding]","TcasGA2_TC013937; LOC657331"]
[489,"NC_007420.3",2634075,"SNV","A","G","Homozygous",20,20,100,1,8,14,0.36,37.45,22,22,8,11,null,1,1,"no","G/G","No",1,80.88,"XP_008192953.1:c.398A>G","XP_008192953.1:p.Lys133Arg","LOC658038",658038,null,"658038 [Gene Symbol: LOC658038] [Locus Tag: TcasGA2_TC013942] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 7] [Gene Type: protein-coding]","LOC658038; TcasGA2_TC013942"]
[492,"NC_007420.3",2755345,"SNV","G","A","Homozygous",22,22,100,1,17,10,0.37,36.55,27,27,11,13,null,1,1,"no","A/A","No",1,88.51,"XP_008192963.1:c.2011G>A","XP_008192963.1:p.Val671Met","LOC658725",658725,null,"658725 [Gene Symbol: LOC658725] [Locus Tag: TcasGA2_TC013946] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC658725; TcasGA2_TC013946"]
[493,"NC_007420.3",2763871,"SNV","G","A","Homozygous",22,22,100,1,22,6,0.21,37.23,28,28,9,18,null,1,1,"no","A/A","No",1,88.51,"XP_970377.1:c.[1037C>T]; XP_008192964.1:c.[1034C>T]","XP_970377.1:p.[Thr346Ile]; XP_008192964.1:p.[Thr345Ile]","LOC658937",658937,null,"658937 [Gene Symbol: LOC658937] [Locus Tag: TcasGA2_TC013862] [Chromosome: LG5] [Map Location: ] [Description: protein painting of fourth] [Gene Type: protein-coding]","LOC658937; TcasGA2_TC013862"]
[494,"NC_007420.3",2764740,"SNV","C","A","Homozygous",23,23,100,1,9,17,0.35,37.35,26,26,11,11,null,1,1,"no","A/A","No",1,91.52,"XP_970377.1:c.[290G>T]; XP_008192964.1:c.[287G>T]","XP_970377.1:p.[Arg97Ile]; XP_008192964.1:p.[Arg96Ile]","LOC658937",658937,null,"658937 [Gene Symbol: LOC658937] [Locus Tag: TcasGA2_TC013862] [Chromosome: LG5] [Map Location: ] [Description: protein painting of fourth] [Gene Type: protein-coding]","LOC658937; TcasGA2_TC013862"]
[496,"NC_007420.3",3413313,"SNV","G","A","Homozygous",21,21,100,1,11,14,0.44,36.71,25,25,8,13,null,1,1,"no","A/A","No",1,85.5,"XP_008192979.1:c.137G>A","XP_008192979.1:p.Arg46Gln","LOC103312905",103312905,null,"103312905 [Gene Symbol: LOC103312905] [Locus Tag: TcasGA2_TC013978] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC013978; LOC103312905"]
[497,"NC_007420.3",3550077,"SNV","T","C","Homozygous",33,33,100,1,16,19,0.46,37.61,35,35,15,21,null,1,1,"no","C/C","No",1,120,"XP_966808.3:c.497A>G","XP_966808.3:p.Lys166Arg","LOC655199",655199,null,"655199 [Gene Symbol: LOC655199] [Locus Tag: TcasGA2_TC013829] [Chromosome: LG5] [Map Location: ] [Description: putative thiosulfate sulfurtransferase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC013829; LOC655199"]
[498,"NC_007420.3",3550079,"SNV","T","A","Homozygous",32,32,100,1,16,21,0.43,37.22,37,37,13,22,null,1,1,"no","A/A","No",1,118.59,"XP_966808.3:c.495A>T","XP_966808.3:p.Lys165Asn","LOC655199",655199,null,"655199 [Gene Symbol: LOC655199] [Locus Tag: TcasGA2_TC013829] [Chromosome: LG5] [Map Location: ] [Description: putative thiosulfate sulfurtransferase, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC013829; LOC655199"]
[499,"NC_007420.3",3598527,"SNV","T","C","Homozygous",21,21,100,1,20,7,0.26,37.14,27,27,8,14,null,1,1,"no","C/C","No",1,83.89,"XP_015835221.1:c.652A>G","XP_015835221.1:p.Lys218Glu","LOC656096",656096,null,"656096 [Gene Symbol: LOC656096] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC656096] [Gene Type: protein-coding]","LOC656096"]
[500,"NC_007420.3",3598532,"SNV","G","C","Homozygous",20,20,100,1,19,8,0.3,36.65,27,27,9,14,null,1,1,"no","C/C","No",1,80.88,"XP_015835221.1:c.647C>G","XP_015835221.1:p.Ala216Gly","LOC656096",656096,null,"656096 [Gene Symbol: LOC656096] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC656096] [Gene Type: protein-coding]","LOC656096"]
[501,"NC_007420.3",3880872,"SNV","T","G","Homozygous",27,27,100,1,13,14,0.48,35.52,27,27,10,12,null,1,1,"no","G/G","No",1,101.95,"XP_015835500.1:c.[2825A>C]; XP_008193024.1:c.[2825A>C]; XP_015835499.1:c.[2825A>C]; XP_015835502.1:c.[2753A>C]","XP_015835500.1:p.[Asn942Thr]; XP_008193024.1:p.[Asn942Thr]; XP_015835499.1:p.[Asn942Thr]; XP_015835502.1:p.[Asn918Thr]","LOC103312925",103312925,null,"103312925 [Gene Symbol: LOC103312925] [Locus Tag: TcasGA2_TC013796] [Chromosome: LG5] [Map Location: ] [Description: DNA N6-methyl adenine demethylase] [Gene Type: protein-coding]","LOC103312925; TcasGA2_TC013796"]
[502,"NC_007420.3",4246932,"SNV","G","A","Heterozygous",10,21,47.62,1,6,10,0.38,37.6,16,27,3,2,-0.63,0.02,1,"no","A/G","No",1,81.76,"XP_008193052.1:c.931G>A","XP_008193052.1:p.Val311Ile","LOC660537",660537,null,"660537 [Gene Symbol: LOC660537] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: protein 60A-like] [Gene Type: protein-coding]","LOC660537"]
[503,"NC_007420.3",4247022,"SNV","C","A","Heterozygous",10,21,47.62,1,10,1,0.09,40,11,23,4,9,2.78,0.12,0.1,"no","A/C","No",1,77.36,"XP_008193052.1:c.1021C>A","XP_008193052.1:p.Leu341Ile","LOC660537",660537,null,"660537 [Gene Symbol: LOC660537] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: protein 60A-like] [Gene Type: protein-coding]","LOC660537"]
[504,"NC_007420.3",4247061,"SNV","T","G","Heterozygous",12,20,60,1,10,4,0.29,37,14,23,7,9,-3.32,0.55,0.54,"no","G/T","No",1,54.5,"XP_008193052.1:c.1060T>G","XP_008193052.1:p.Phe354Val","LOC660537",660537,null,"660537 [Gene Symbol: LOC660537] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: protein 60A-like] [Gene Type: protein-coding]","LOC660537"]
[507,"NC_007420.3",4952647,"SNV","C","T","Homozygous",24,24,100,1,7,20,0.26,38.38,27,27,13,15,null,1,1,"no","T/T","No",1,94.55,"XP_008193134.1:c.4867G>A","XP_008193134.1:p.Ala1623Thr","LOC662874",662874,null,"662874 [Gene Symbol: LOC662874] [Locus Tag: TcasGA2_TC013742] [Chromosome: LG5] [Map Location: ] [Description: myosin 7B] [Gene Type: protein-coding]","Myo7B; LOC662874; TcasGA2_TC013742"]
[509,"NC_007420.3",4996279,"SNV","C","G","Homozygous",22,22,100,1,17,12,0.41,36.73,29,29,9,15,null,1,1,"no","G/G","No",1,86.9,"NP_001164247.1:c.475C>G","NP_001164247.1:p.Pro159Ala","Fz",663095,"frizzled","663095 [Gene Symbol: Fz] [Locus Tag: TcasGA2_TC014055] [Chromosome: LG5] [Map Location: ] [Description: frizzled] [Gene Type: protein-coding]","Fz; GLEAN_14055; TcasGA2_TC014055"]
[510,"NC_007420.3",5412971,"SNV","A","G","Homozygous",23,23,100,1,17,11,0.39,37.17,28,28,11,14,null,1,1,"no","G/G","No",1,89.91,"XP_015835439.1:c.[1317+1741T>C]; XP_015835437.1:c.[1485+1741T>C]; XP_015835438.1:c.[1317+1741T>C]; XP_015835432.1:c.[1515+1741T>C]; XP_015835434.1:c.[1485+1741T>C]; XP_015835433.1:c.[1485+1741T>C]; XP_015835435.1:c.[1485+1741T>C]; XP_008193194.1:c.[358A>G]; XP_015835440.1:c.[1266+1741T>C]","XP_008193194.1:p.Ser120Gly","LOC655273, LOC103312978","655273 , 103312978",null,"655273 [Gene Symbol: LOC655273] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: adenylate cyclase type 8] [Gene Type: protein-coding] || 103312978 [Gene Symbol: LOC103312978] [Locus Tag: TcasGA2_TC014080] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC655273 || LOC103312978; TcasGA2_TC014080"]
[512,"NC_007420.3",5434310,"SNV","A","G","Homozygous",24,24,100,1,0,24,0,38.21,24,24,4,4,null,1,1,"no","G/G","No",1,92.92,"XP_015835278.1:c.[161T>C]; XP_015835280.1:c.[1436+190T>C]; XP_008193174.2:c.[1555+190T>C]","XP_015835278.1:p.Ile54Thr","LOC655359, LOC107397896","655359 , 107397896",null,"655359 [Gene Symbol: LOC655359] [Locus Tag: TcasGA2_TC013716] [Chromosome: LG5] [Map Location: ] [Description: FERM, RhoGEF and pleckstrin domain-containing protein 1] [Gene Type: protein-coding] || 107397896 [Gene Symbol: LOC107397896] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","TcasGA2_TC013716; LOC655359 || LOC107397896"]
[513,"NC_007420.3",5666728,"SNV","A","G","Homozygous",21,21,100,1,19,8,0.3,38.33,27,27,9,12,null,1,1,"no","G/G","No",1,83.89,"XP_008193225.1:c.6275A>G","XP_008193225.1:p.Glu2092Gly","LOC100142258",100142258,null,"100142258 [Gene Symbol: LOC100142258] [Locus Tag: TcasGA2_TC014099] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC100142258] [Gene Type: protein-coding]","TcasGA2_TC014099; LOC100142258"]
[514,"NC_007420.3",6444795,"SNV","C","T","Homozygous",20,20,100,1,16,13,0.45,39.7,29,29,9,11,null,1,1,"no","T/T","No",1,82.52,"XP_008193300.1:c.1909G>A","XP_008193300.1:p.Asp637Asn","LOC103312995",103312995,null,"103312995 [Gene Symbol: LOC103312995] [Locus Tag: TcasGA2_TC013670] [Chromosome: LG5] [Map Location: ] [Description: cubilin] [Gene Type: protein-coding]","TcasGA2_TC013670; LOC103312995"]
[515,"NC_007420.3",7107809,"SNV","A","C","Homozygous",27,27,100,1,15,20,0.43,38.67,35,35,14,21,null,1,1,"no","C/C","No",1,101.95,"XP_008193189.2:c.76T>G","XP_008193189.2:p.Ser26Ala","LOC103312975",103312975,null,"103312975 [Gene Symbol: LOC103312975] [Locus Tag: TcasGA2_TC013645] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312975; TcasGA2_TC013645"]
[516,"NC_007420.3",7107820,"SNV","G","C","Heterozygous",12,28,42.86,1,7,7,0.5,38.58,14,37,6,8,0.44,0.4,0.94,"no","C/G","No",1,88.77,"XP_008193189.2:c.65C>G","XP_008193189.2:p.Ser22Cys","LOC103312975",103312975,null,"103312975 [Gene Symbol: LOC103312975] [Locus Tag: TcasGA2_TC013645] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312975; TcasGA2_TC013645"]
[517,"NC_007420.3","7110982..7110983","MNV","CA","TG","Heterozygous",11,20,55,1,4,7,0.36,38.99,11,23,7,7,null,0.44,0.98,"no","complex","No",1,200,"XP_008193190.1:c.56_57delTGinsCA","XP_008193190.1:p.Val19Ala","LOC103312976",103312976,null,"103312976 [Gene Symbol: LOC103312976] [Locus Tag: TcasGA2_TC013644] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312976] [Gene Type: protein-coding]","LOC103312976; TcasGA2_TC013644"]
[518,"NC_007420.3",7110983,"SNV","A","G","Heterozygous",9,20,45,1,3,9,0.25,36.17,12,23,6,8,null,0.41,0.98,"no","complex","No",1,200,"XP_008193190.1:c.56T>C","XP_008193190.1:p.Val19Ala","LOC103312976",103312976,null,"103312976 [Gene Symbol: LOC103312976] [Locus Tag: TcasGA2_TC013644] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103312976] [Gene Type: protein-coding]","LOC103312976; TcasGA2_TC013644"]
[519,"NC_007420.3",7320763,"SNV","G","C","Homozygous",20,20,100,1,17,12,0.41,35.5,29,29,13,11,null,1,1,"no","C/C","No",1,80.88,"XP_015835274.1:c.688G>C","XP_015835274.1:p.Glu230Gln","LOC103314913",103314913,null,"103314913 [Gene Symbol: LOC103314913] [Locus Tag: TcasGA2_TC010439] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103314913] [Gene Type: protein-coding]","LOC103314913; TcasGA2_TC010439"]
[520,"NC_007420.3",7387555,"SNV","C","G","Homozygous",22,22,100,1,4,18,0.18,38.91,22,22,9,12,null,1,1,"no","G/G","No",1,86.9,"XP_971438.1:c.[1895C>G]; XP_008200443.1:c.[1895C>G]; XP_015835401.1:c.[1895C>G]","XP_971438.1:p.[Thr632Ser]; XP_008200443.1:p.[Thr632Ser]; XP_015835401.1:p.[Thr632Ser]","LOC660083",660083,null,"660083 [Gene Symbol: LOC660083] [Locus Tag: TcasGA2_TC010445] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC660083] [Gene Type: protein-coding]","TcasGA2_TC010445; LOC660083"]
[521,"NC_007420.3",7518311,"SNV","G","T","Homozygous",31,31,100,1,29,13,0.31,37.71,42,42,11,15,null,1,1,"no","T/T","No",1,115.62,"NP_001076794.1:c.[656G>T]; XP_008200421.1:c.[656G>T]","NP_001076794.1:p.[Arg219Leu]; XP_008200421.1:p.[Arg219Leu]","Cry2",661402,"cryptochrome 2","661402 [Gene Symbol: Cry2] [Locus Tag: TcasGA2_TC010454] [Chromosome: LG5] [Map Location: ] [Description: cryptochrome 2] [Gene Type: protein-coding]","Cry2; TcasGA2_TC010454"]
[522,"NC_007420.3",7883966,"SNV","A","G","Homozygous",22,22,100,1,21,9,0.3,36.18,30,30,12,17,null,1,1,"no","G/G","No",1,86.9,"XP_008200509.1:c.[1927A>G]; XP_008200511.1:c.[1927A>G]; XP_008200513.1:c.[1636A>G]; XP_008200510.1:c.[1927A>G]; XP_015835345.1:c.[2239A>G]; XP_008200512.1:c.[1759A>G]; XP_015835346.1:c.[1843A>G]; XP_015835347.1:c.[1759A>G]; XP_008200508.1:c.[2200A>G]","XP_008200509.1:p.[Thr643Ala]; XP_008200511.1:p.[Thr643Ala]; XP_008200513.1:p.[Thr546Ala]; XP_008200510.1:p.[Thr643Ala]; XP_015835345.1:p.[Thr747Ala]; XP_008200512.1:p.[Thr587Ala]; XP_015835346.1:p.[Thr615Ala]; XP_015835347.1:p.[Thr587Ala]; XP_008200508.1:p.[Thr734Ala]","LOC662427",662427,null,"662427 [Gene Symbol: LOC662427] [Locus Tag: TcasGA2_TC010468] [Chromosome: LG5] [Map Location: ] [Description: fibronectin type-III domain-containing protein 3A] [Gene Type: protein-coding]","LOC662427; TcasGA2_TC010468"]
[523,"NC_007420.3",8083767,"SNV","A","G","Homozygous",24,24,100,1,6,23,0.21,37.96,29,29,10,12,null,1,1,"no","G/G","No",1,92.92,"XP_976183.1:c.961A>G","XP_976183.1:p.Ile321Val","LOC656350",656350,null,"656350 [Gene Symbol: LOC656350] [Locus Tag: TcasGA2_TC014259] [Chromosome: LG5] [Map Location: ] [Description: cell division cycle-associated protein 3] [Gene Type: protein-coding]","TcasGA2_TC014259; LOC656350"]
[524,"NC_007420.3",8153382,"SNV","G","A","Homozygous",23,23,100,1,14,12,0.46,36.39,26,26,11,15,null,1,1,"no","A/A","No",1,91.52,"XP_015836133.1:c.1004G>A","XP_015836133.1:p.Ser335Asn","LOC103313085",103313085,null,"103313085 [Gene Symbol: LOC103313085] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: stromelysin-1-like] [Gene Type: protein-coding]","LOC103313085"]
[526,"NC_007420.3",8534853,"SNV","C","T","Homozygous",23,23,100,1,19,6,0.24,36.7,25,25,15,12,null,1,1,"no","T/T","No",1,91.55,"XP_972525.1:c.188G>A","XP_972525.1:p.Ser63Asn","LOC661260",661260,null,"661260 [Gene Symbol: LOC661260] [Locus Tag: TcasGA2_TC013515] [Chromosome: LG5] [Map Location: ] [Description: sorting nexin-21] [Gene Type: protein-coding]","TcasGA2_TC013515; LOC661260"]
[527,"NC_007420.3",8535697,"SNV","T","A","Homozygous",29,29,100,1,24,9,0.27,36.38,33,33,12,18,null,1,1,"no","A/A","No",1,109.57,"XP_008193695.1:c.214T>A","XP_008193695.1:p.Leu72Ile","LOC103313099",103313099,null,"103313099 [Gene Symbol: LOC103313099] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: solute carrier family 25 member 51] [Gene Type: protein-coding]","LOC103313099"]
[533,"NC_007420.3",8928844,"SNV","C","A","Heterozygous",10,25,40,1,0,10,0,36.2,10,31,3,6,0.44,0.28,0.11,"no","A/C","No",1,66.28,"XP_973596.2:c.1463C>A","XP_973596.2:p.Thr488Asn","LOC662406",662406,null,"662406 [Gene Symbol: LOC662406] [Locus Tag: TcasGA2_TC014310] [Chromosome: LG5] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD2] [Gene Type: protein-coding]","TcasGA2_TC014310; LOC662406"]
[535,"NC_007420.3",9026817,"SNV","G","T","Heterozygous",12,37,32.43,1,12,0,0,35.75,12,37,1,8,-1.82,0.05,0.3,"no","G/T","No",1,58.15,"NP_001096056.1:c.241C>A","NP_001096056.1:p.Pro81Thr","Ddc",662962,"dopa decarboxylase","662962 [Gene Symbol: Ddc] [Locus Tag: TcasGA2_TC013480] [Chromosome: LG5] [Map Location: ] [Description: dopa decarboxylase] [Gene Type: protein-coding]","TcasGA2_TC013480; Ddc"]
[537,"NC_007420.3",9035529,"SNV","A","G","Homozygous",20,20,100,1,13,18,0.42,35.95,31,31,11,10,null,1,1,"no","G/G","No",1,80.88,"XP_974250.1:c.[1007T>C]; XP_974277.2:c.[422+614A>G]","XP_974250.1:p.Leu336Ser","LOC663123, LOC663096","663123 , 663096",null,"663123 [Gene Symbol: LOC663123] [Locus Tag: TcasGA2_TC014320] [Chromosome: LG5] [Map Location: ] [Description: cGMP-dependent protein kinase 1] [Gene Type: protein-coding] || 663096 [Gene Symbol: LOC663096] [Locus Tag: TcasGA2_TC013478] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663096] [Gene Type: protein-coding]","LOC663123; TcasGA2_TC014320 || TcasGA2_TC013478; LOC663096"]
[538,"NC_007420.3",9089409,"SNV","A","G","Homozygous",20,20,100,1,10,14,0.42,37.6,24,24,8,12,null,1,1,"no","G/G","No",1,80.88,"XP_008193734.1:c.5255T>C","XP_008193734.1:p.Phe1752Ser","LOC103313111",103313111,null,"103313111 [Gene Symbol: LOC103313111] [Locus Tag: TcasGA2_TC013472] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC013472; LOC103313111"]
[539,"NC_007420.3",9090159,"SNV","A","T","Homozygous",22,22,100,1,13,11,0.46,36.09,24,24,13,14,null,1,1,"no","T/T","No",1,88.54,"XP_008193734.1:c.4505T>A","XP_008193734.1:p.Val1502Asp","LOC103313111",103313111,null,"103313111 [Gene Symbol: LOC103313111] [Locus Tag: TcasGA2_TC013472] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC013472; LOC103313111"]
[540,"NC_007420.3",9112203,"SNV","G","A","Homozygous",22,22,100,1,8,14,0.36,39.18,22,22,7,15,null,1,1,"no","A/A","No",1,88.51,"XP_015835630.1:c.1460G>A","XP_015835630.1:p.Gly487Asp","LOC663310",663310,null,"663310 [Gene Symbol: LOC663310] [Locus Tag: TcasGA2_TC014326] [Chromosome: LG5] [Map Location: ] [Description: collagen alpha-2(IV) chain] [Gene Type: protein-coding]","TcasGA2_TC014326; LOC663310"]
[541,"NC_007420.3",9129248,"SNV","C","A","Homozygous",23,23,100,1,10,20,0.33,36.43,30,30,9,16,null,1,1,"no","A/A","No",1,91.52,"XP_008193737.1:c.1381C>A","XP_008193737.1:p.Pro461Thr","LOC103313112",103313112,null,"103313112 [Gene Symbol: LOC103313112] [Locus Tag: TcasGA2_TC014328] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313112; TcasGA2_TC014328"]
[542,"NC_007420.3",9129271,"SNV","C","A","Homozygous",21,21,100,1,6,19,0.24,38.71,25,25,7,14,null,1,1,"no","A/A","No",1,85.5,"XP_008193737.1:c.1404C>A","XP_008193737.1:p.Asp468Glu","LOC103313112",103313112,null,"103313112 [Gene Symbol: LOC103313112] [Locus Tag: TcasGA2_TC014328] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313112; TcasGA2_TC014328"]
[543,"NC_007420.3",9266857,"SNV","A","G","Homozygous",22,22,100,1,3,19,0.14,38.05,22,22,8,15,null,1,1,"no","G/G","No",1,86.9,"XP_008193748.1:c.[4201T>C]; XP_008193750.1:c.[4201T>C]; XP_008193749.1:c.[4198T>C]","XP_008193748.1:p.[Ser1401Pro]; XP_008193750.1:p.[Ser1401Pro]; XP_008193749.1:p.[Ser1400Pro]","LOC663618",663618,null,"663618 [Gene Symbol: LOC663618] [Locus Tag: TcasGA2_TC013457] [Chromosome: LG5] [Map Location: ] [Description: 5'-3' exoribonuclease 1] [Gene Type: protein-coding]","TcasGA2_TC013457; XRN1; LOC663618"]
[544,"NC_007420.3",9269498,"SNV","A","T","Homozygous",21,21,100,1,8,16,0.33,38.33,24,24,7,16,null,1,1,"no","T/T","No",1,85.53,"XP_008193748.1:c.[2220T>A]; XP_008193749.1:c.[2220T>A]; XP_008193750.1:c.[2220T>A]","XP_008193748.1:p.[Asp740Glu]; XP_008193749.1:p.[Asp740Glu]; XP_008193750.1:p.[Asp740Glu]","LOC663618",663618,null,"663618 [Gene Symbol: LOC663618] [Locus Tag: TcasGA2_TC013457] [Chromosome: LG5] [Map Location: ] [Description: 5'-3' exoribonuclease 1] [Gene Type: protein-coding]","TcasGA2_TC013457; XRN1; LOC663618"]
[545,"NC_007420.3",9379601,"SNV","C","G","Homozygous",24,24,100,1,14,14,0.5,39.21,28,28,10,14,null,1,1,"no","G/G","No",1,92.92,"XP_008193526.1:c.1474C>G","XP_008193526.1:p.Pro492Ala","LOC654990",654990,null,"654990 [Gene Symbol: LOC654990] [Locus Tag: TcasGA2_TC014339] [Chromosome: LG5] [Map Location: ] [Description: nuclear pore complex protein Nup214] [Gene Type: protein-coding]","LOC654990; TcasGA2_TC014339"]
[546,"NC_007420.3",9381499,"SNV","G","A","Homozygous",23,23,100,1,14,9,0.39,38.57,23,23,11,11,null,1,1,"no","A/A","No",1,91.51,"XP_008193526.1:c.3271G>A","XP_008193526.1:p.Val1091Ile","LOC654990",654990,null,"654990 [Gene Symbol: LOC654990] [Locus Tag: TcasGA2_TC014339] [Chromosome: LG5] [Map Location: ] [Description: nuclear pore complex protein Nup214] [Gene Type: protein-coding]","LOC654990; TcasGA2_TC014339"]
[548,"NC_007420.3",9383426,"SNV","A","G","Homozygous",24,24,100,1,11,20,0.35,37.71,31,31,9,11,null,1,1,"no","G/G","No",1,92.92,"XP_008193526.1:c.5198A>G","XP_008193526.1:p.Asn1733Ser","LOC654990",654990,null,"654990 [Gene Symbol: LOC654990] [Locus Tag: TcasGA2_TC014339] [Chromosome: LG5] [Map Location: ] [Description: nuclear pore complex protein Nup214] [Gene Type: protein-coding]","LOC654990; TcasGA2_TC014339"]
[552,"NC_007420.3",9453965,"SNV","T","G","Homozygous",21,21,100,1,3,20,0.13,38.57,23,23,8,12,null,1,1,"no","G/G","No",1,83.89,"XP_967744.1:c.[1883T>G]; XP_008193535.1:c.[1928T>G]","XP_967744.1:p.[Leu628Arg]; XP_008193535.1:p.[Leu643Arg]","LOC656100",656100,null,"656100 [Gene Symbol: LOC656100] [Locus Tag: TcasGA2_TC014345] [Chromosome: LG5] [Map Location: ] [Description: flocculation protein FLO11] [Gene Type: protein-coding]","TcasGA2_TC014345; LOC656100"]
[553,"NC_007420.3",9465600,"SNV","C","T","Homozygous",20,20,100,1,7,13,0.35,39,20,20,6,10,null,1,1,"no","T/T","No",1,82.52,"XP_015836164.1:c.11C>T","XP_015836164.1:p.Ala4Val","LOC656351",656351,null,"656351 [Gene Symbol: LOC656351] [Locus Tag: TcasGA2_TC014347] [Chromosome: LG5] [Map Location: ] [Description: protein msta, isoform B] [Gene Type: protein-coding]","LOC656351; TcasGA2_TC014347"]
[554,"NC_007420.3",9466061,"SNV","A","G","Homozygous",21,21,100,1,11,20,0.35,35.43,31,31,11,11,null,1,1,"no","G/G","No",1,83.89,"XP_015836164.1:c.472A>G","XP_015836164.1:p.Ile158Val","LOC656351",656351,null,"656351 [Gene Symbol: LOC656351] [Locus Tag: TcasGA2_TC014347] [Chromosome: LG5] [Map Location: ] [Description: protein msta, isoform B] [Gene Type: protein-coding]","LOC656351; TcasGA2_TC014347"]
[555,"NC_007420.3",9469079,"SNV","C","G","Homozygous",28,28,100,1,15,14,0.48,38.21,29,29,14,18,null,1,1,"no","G/G","No",1,104.95,"XP_968058.1:c.373C>G","XP_968058.1:p.Gln125Glu","LOC656432",656432,null,"656432 [Gene Symbol: LOC656432] [Locus Tag: TcasGA2_TC014348] [Chromosome: LG5] [Map Location: ] [Description: beta-galactosidase-1-like protein 2] [Gene Type: protein-coding]","LOC656432; TcasGA2_TC014348"]
[558,"NC_007420.3",9854007,"SNV","T","C","Homozygous",21,21,100,1,6,18,0.25,38.38,24,24,5,7,null,1,1,"no","C/C","No",1,83.89,"XP_008193553.2:c.4571A>G","XP_008193553.2:p.Asn1524Ser","LOC658870",658870,null,"658870 [Gene Symbol: LOC658870] [Locus Tag: TcasGA2_TC013423] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC658870] [Gene Type: protein-coding]","LOC658870; TcasGA2_TC013423"]
[559,"NC_007420.3",9903769,"SNV","T","C","Homozygous",21,21,100,1,14,9,0.39,37.81,23,23,10,12,null,1,1,"no","C/C","No",1,83.89,"NP_001139461.1:c.[58+83A>G]; XP_008193524.2:c.[74A>G]","XP_008193524.2:p.Gln25Arg","sPLA2C",659784,"phospholipase A2C","659784 [Gene Symbol: sPLA2C] [Locus Tag: TcasGA2_TC013419] [Chromosome: LG5] [Map Location: ] [Description: phospholipase A2C] [Gene Type: protein-coding]","sPLA2C; TcasGA2_TC013419"]
[560,"NC_007420.3",9952563,"SNV","A","G","Homozygous",20,20,100,1,10,13,0.43,37.7,23,23,8,9,null,1,1,"no","G/G","No",1,80.87,"XP_015835853.1:c.[3043A>G]; XP_971632.1:c.[3043A>G]; XP_015835854.1:c.[3043A>G]; XP_015835852.1:c.[3043A>G]","XP_015835853.1:p.[Arg1015Gly]; XP_971632.1:p.[Arg1015Gly]; XP_015835854.1:p.[Arg1015Gly]; XP_015835852.1:p.[Arg1015Gly]","LOC660296",660296,null,"660296 [Gene Symbol: LOC660296] [Locus Tag: TcasGA2_TC014379] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","LOC660296; TcasGA2_TC014379"]
[561,"NC_007420.3",9964175,"SNV","G","C","Homozygous",32,34,94.12,1,18,17,0.49,38.56,35,37,14,18,null,1,1,"no","C/C","No",1,57.26,"XP_008193591.1:c.370G>C","XP_008193591.1:p.Asp124His","LOC103313070",103313070,null,"103313070 [Gene Symbol: LOC103313070] [Locus Tag: TcasGA2_TC014382] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","TcasGA2_TC014382; LOC103313070"]
[562,"NC_007420.3",9964177,"SNV","T","A","Homozygous",31,33,93.94,1,17,16,0.48,38.32,33,35,13,17,null,1,1,"no","A/A","No",1,55.71,"XP_008193591.1:c.372T>A","XP_008193591.1:p.Asp124Glu","LOC103313070",103313070,null,"103313070 [Gene Symbol: LOC103313070] [Locus Tag: TcasGA2_TC014382] [Chromosome: LG5] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding]","TcasGA2_TC014382; LOC103313070"]
[566,"NC_007420.3",9998778,"SNV","T","C","Homozygous",24,24,100,1,16,11,0.41,37.83,27,27,7,10,null,1,1,"no","C/C","No",1,92.92,"XP_008193575.1:c.[1595T>C]; XP_015835865.1:c.[1595T>C]","XP_008193575.1:p.[Leu532Ser]; XP_015835865.1:p.[Leu532Ser]","LOC103313062",103313062,null,"103313062 [Gene Symbol: LOC103313062] [Locus Tag: TcasGA2_TC014390] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313062] [Gene Type: protein-coding]","TcasGA2_TC014390; P149; LOC103313062"]
[567,"NC_007420.3",9998801,"SNV","G","A","Heterozygous",15,24,62.5,1,7,8,0.47,37,15,27,4,7,0.03,0.63,1,"no","A/G","No",1,62.5,"XP_008193575.1:c.[1618G>A]; XP_015835865.1:c.[1618G>A]","XP_008193575.1:p.[Val540Ile]; XP_015835865.1:p.[Val540Ile]","LOC103313062",103313062,null,"103313062 [Gene Symbol: LOC103313062] [Locus Tag: TcasGA2_TC014390] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: uncharacterized LOC103313062] [Gene Type: protein-coding]","TcasGA2_TC014390; P149; LOC103313062"]
[568,"NC_007420.3",10020751,"SNV","C","T","Heterozygous",10,22,45.45,1,0,10,0,35.4,10,27,2,6,1.75,0.1,0.22,"no","C/T","No",1,79.19,"XP_015836128.1:c.1580C>T","XP_015836128.1:p.Ala527Val","LOC661374",661374,null,"661374 [Gene Symbol: LOC661374] [Locus Tag: TcasGA2_TC014394] [Chromosome: LG5] [Map Location: ] [Description: fibrous sheath CABYR-binding protein] [Gene Type: protein-coding]","TcasGA2_TC014394; LOC661374"]
[570,"NC_007420.3",10020814,"SNV","C","T","Homozygous",21,21,100,1,5,16,0.24,38.1,21,21,7,8,null,1,1,"no","T/T","No",1,85.52,"XP_015836128.1:c.1643C>T","XP_015836128.1:p.Ser548Leu","LOC661374",661374,null,"661374 [Gene Symbol: LOC661374] [Locus Tag: TcasGA2_TC014394] [Chromosome: LG5] [Map Location: ] [Description: fibrous sheath CABYR-binding protein] [Gene Type: protein-coding]","TcasGA2_TC014394; LOC661374"]
[572,"NC_007420.3",10039006,"SNV","T","C","Homozygous",20,20,100,1,14,9,0.39,38.65,23,23,11,14,null,1,1,"no","C/C","No",1,80.88,"XP_008193579.1:c.4096A>G","XP_008193579.1:p.Lys1366Glu","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[573,"NC_007420.3",10039481,"SNV","G","T","Homozygous",21,21,100,1,16,6,0.27,37.19,22,22,9,15,null,1,1,"no","T/T","No",1,85.52,"XP_008193579.1:c.3664C>A","XP_008193579.1:p.Pro1222Thr","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[575,"NC_007420.3",10039640,"SNV","C","T","Heterozygous",11,20,55,1,6,7,0.46,36.27,13,22,8,7,-0.72,0.34,0.6,"no","C/T","No",1,76.14,"XP_008193579.1:c.3505G>A","XP_008193579.1:p.Ala1169Thr","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[577,"NC_007420.3",10040704,"SNV","C","A","Homozygous",22,22,100,1,7,19,0.27,39.23,26,26,10,13,null,1,1,"no","A/A","No",1,88.51,"XP_008193579.1:c.2500G>T","XP_008193579.1:p.Val834Phe","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[579,"NC_007420.3",10042140,"SNV","C","A","Homozygous",24,24,100,1,6,19,0.24,37.96,25,25,10,16,null,1,1,"no","A/A","No",1,94.52,"XP_008193579.1:c.1211G>T","XP_008193579.1:p.Cys404Phe","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[580,"NC_007420.3",10042243,"SNV","C","T","Homozygous",21,21,100,1,6,20,0.23,38.62,26,26,7,12,null,1,1,"no","T/T","No",1,85.53,"XP_008193579.1:c.1108G>A","XP_008193579.1:p.Val370Met","LOC661547",661547,null,"661547 [Gene Symbol: LOC661547] [Locus Tag: TcasGA2_TC013406] [Chromosome: LG5] [Map Location: ] [Description: dedicator of cytokinesis protein 9] [Gene Type: protein-coding]","LOC661547; TcasGA2_TC013406"]
[583,"NC_007420.3",10237459,"SNV","A","T","Heterozygous",8,20,40,1,8,0,0,36.5,8,20,1,8,0.62,0.06,0.71,"no","A/T","No",1,59.38,"XP_008193853.1:c.977A>T","XP_008193853.1:p.Asn326Ile","LOC663071",663071,null,"663071 [Gene Symbol: LOC663071] [Locus Tag: TcasGA2_TC014417] [Chromosome: LG5] [Map Location: ] [Description: neuralized-like protein 4] [Gene Type: protein-coding]","blue; bluestreak; LOC663071; TcasGA2_TC014417"]
[585,"NC_007420.3",10244034,"SNV","T","C","Homozygous",26,26,100,1,15,15,0.5,36.54,30,30,11,21,null,1,1,"no","C/C","No",1,98.94,"XP_974278.2:c.983A>G","XP_974278.2:p.Lys328Arg","LOC663124",663124,null,"663124 [Gene Symbol: LOC663124] [Locus Tag: TcasGA2_TC013381] [Chromosome: LG5] [Map Location: ] [Description: EF-hand domain-containing family member C2] [Gene Type: protein-coding]","LOC663124; TcasGA2_TC013381"]
[586,"NC_007420.3","10250740..10250741","MNV","CG","TA","Heterozygous",6,26,23.08,1,3,3,0.5,35.49,6,26,3,5,null,0.09,0.9,"no","complex","No",1,200,"XP_008193854.1:c.852_853delCGinsTA","XP_008193854.1:p.Val285Ile","LOC663179",663179,null,"663179 [Gene Symbol: LOC663179] [Locus Tag: TcasGA2_TC014420] [Chromosome: LG5] [Map Location: ] [Description: extended synaptotagmin-like protein 2b] [Gene Type: protein-coding]","TcasGA2_TC014420; LOC663179; Esyt2b"]
[587,"NC_007420.3",10256280,"SNV","G","C","Homozygous",21,21,100,1,18,7,0.28,37.81,25,25,6,14,null,1,1,"no","C/C","No",1,83.88,"XP_008193857.1:c.[2222G>C]; XP_015835814.1:c.[2222G>C]; XP_015835815.1:c.[2222G>C]","XP_008193857.1:p.[Arg741Pro]; XP_015835814.1:p.[Arg741Pro]; XP_015835815.1:p.[Arg741Pro]","LOC663203",663203,null,"663203 [Gene Symbol: LOC663203] [Locus Tag: TcasGA2_TC014421] [Chromosome: LG5] [Map Location: ] [Description: extended synaptotagmin-like protein 2c] [Gene Type: protein-coding]","LOC663203; Esyt2c; GLEAN_14421; TcasGA2_TC014421"]
[589,"NC_007420.3",10413290,"SNV","C","T","Homozygous",23,23,100,1,10,15,0.4,37,25,25,13,18,null,1,1,"no","T/T","No",1,91.55,"XP_974629.1:c.844C>T","XP_974629.1:p.Arg282Trp","LOC663495",663495,null,"663495 [Gene Symbol: LOC663495] [Locus Tag: TcasGA2_TC014435] [Chromosome: LG5] [Map Location: ] [Description: alpha-methylacyl-CoA racemase] [Gene Type: protein-coding]","LOC663495; TcasGA2_TC014435"]
[592,"NC_007420.3",10599892,"SNV","A","G","Homozygous",21,21,100,1,15,15,0.5,38.05,30,30,11,10,null,1,1,"no","G/G","No",1,83.89,"XP_015835807.1:c.[1100A>G]; XP_001816010.2:c.[2216A>G]","XP_015835807.1:p.[His367Arg]; XP_001816010.2:p.[His739Arg]","LOC663788",663788,null,"663788 [Gene Symbol: LOC663788] [Locus Tag: TcasGA2_TC014455] [Chromosome: LG5] [Map Location: ] [Description: ubiquitin carboxyl-terminal hydrolase CYLD] [Gene Type: protein-coding]","LOC663788; TcasGA2_TC014455"]
[593,"NC_007420.3",10601234,"SNV","A","C","Homozygous",31,31,100,1,24,13,0.35,38.16,37,37,14,14,null,1,1,"no","C/C","No",1,113.99,"XP_974927.1:c.483T>G","XP_974927.1:p.His161Gln","LOC663799",663799,null,"663799 [Gene Symbol: LOC663799] [Locus Tag: TcasGA2_TC013356] [Chromosome: LG5] [Map Location: ] [Description: probable Golgi SNAP receptor complex member 2] [Gene Type: protein-coding]","LOC663799; TcasGA2_TC013356"]
[594,"NC_007420.3",10601705,"SNV","T","A","Homozygous",21,21,100,1,11,10,0.48,38.48,21,21,9,14,null,1,1,"no","A/A","No",1,85.5,"XP_974927.1:c.59A>T","XP_974927.1:p.Gln20Leu","LOC663799",663799,null,"663799 [Gene Symbol: LOC663799] [Locus Tag: TcasGA2_TC013356] [Chromosome: LG5] [Map Location: ] [Description: probable Golgi SNAP receptor complex member 2] [Gene Type: protein-coding]","LOC663799; TcasGA2_TC013356"]
[595,"NC_007420.3",10608416,"SNV","A","T","Homozygous",32,32,100,1,17,18,0.49,39.5,35,35,11,21,null,1,1,"no","T/T","No",1,118.62,"XP_015835806.1:c.1550T>A","XP_015835806.1:p.Ile517Lys","LOC663878",663878,null,"663878 [Gene Symbol: LOC663878] [Locus Tag: TcasGA2_TC013351] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663878] [Gene Type: protein-coding]","LOC663878; TcasGA2_TC013351"]
[596,"NC_007420.3",10608445,"SNV","G","C","Homozygous",31,31,100,1,21,14,0.4,37.13,35,35,13,20,null,1,1,"no","C/C","No",1,113.98,"XP_015835806.1:c.1521C>G","XP_015835806.1:p.Asp507Glu","LOC663878",663878,null,"663878 [Gene Symbol: LOC663878] [Locus Tag: TcasGA2_TC013351] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663878] [Gene Type: protein-coding]","LOC663878; TcasGA2_TC013351"]
[598,"NC_007420.3",10671180,"SNV","G","C","Homozygous",20,20,100,1,14,7,0.33,37.4,21,21,12,16,null,1,1,"no","C/C","No",1,80.88,"XP_015835806.1:c.918C>G","XP_015835806.1:p.Asp306Glu","LOC663878",663878,null,"663878 [Gene Symbol: LOC663878] [Locus Tag: TcasGA2_TC013351] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC663878] [Gene Type: protein-coding]","LOC663878; TcasGA2_TC013351"]
[599,"NC_007420.3",10674407,"SNV","T","C","Homozygous",21,21,100,1,8,14,0.36,38.9,22,22,10,11,null,1,1,"no","C/C","No",1,83.89,"XP_008193897.1:c.619A>G","XP_008193897.1:p.Ile207Val","LOC103313157",103313157,null,"103313157 [Gene Symbol: LOC103313157] [Locus Tag: TcasGA2_TC013350] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein DZIP1L] [Gene Type: protein-coding]","TcasGA2_TC013350; LOC103313157"]
[600,"NC_007420.3","10674412..10674413","MNV","GA","AC","Homozygous",22,27,81.48,1,9,14,0.39,37.88,23,28,12,12,1.86,0.76,0.91,"no","AC/AC","No",1,200,"XP_008193897.1:c.613_614delTCinsGT","XP_008193897.1:p.Ser205Val","LOC103313157",103313157,null,"103313157 [Gene Symbol: LOC103313157] [Locus Tag: TcasGA2_TC013350] [Chromosome: LG5] [Map Location: ] [Description: zinc finger protein DZIP1L] [Gene Type: protein-coding]","TcasGA2_TC013350; LOC103313157"]
[602,"NC_007420.3",10692567,"SNV","G","A","Heterozygous",13,25,52,1,9,10,0.47,37.54,19,31,6,9,-0.52,0.14,0.55,"no","A/G","No",1,97.65,"XP_008193900.1:c.2534C>T","XP_008193900.1:p.Pro845Leu","LOC663972",663972,null,"663972 [Gene Symbol: LOC663972] [Locus Tag: TcasGA2_TC013347] [Chromosome: LG5] [Map Location: ] [Description: DNA repair protein complementing XP-G cells homolog] [Gene Type: protein-coding]","TcasGA2_TC013347; LOC663972"]
[605,"NC_007420.3",11184365,"SNV","A","G","Homozygous",20,20,100,1,2,18,0.1,36.85,20,20,10,13,null,1,1,"no","G/G","No",1,80.88,"XP_008193949.1:c.[3580A>G]; XP_015835757.1:c.[3580A>G]; XP_015835756.1:c.[3580A>G]","XP_008193949.1:p.[Ile1194Val]; XP_015835757.1:p.[Ile1194Val]; XP_015835756.1:p.[Ile1194Val]","LOC103313173",103313173,null,"103313173 [Gene Symbol: LOC103313173] [Locus Tag: TcasGA2_TC014491] [Chromosome: LG5] [Map Location: ] [Description: LRR receptor-like serine/threonine-protein kinase GSO2] [Gene Type: protein-coding]","LOC103313173; TcasGA2_TC014491"]
[606,"NC_007420.3",11204847,"SNV","A","G","Homozygous",21,21,100,1,16,8,0.33,37.67,24,24,9,15,null,1,1,"no","G/G","No",1,83.88,"XP_008193933.1:c.[182T>C]; XP_015835759.1:c.[92T>C]","XP_008193933.1:p.[Leu61Ser]; XP_015835759.1:p.[Leu31Ser]","LOC658283",658283,null,"658283 [Gene Symbol: LOC658283] [Locus Tag: TcasGA2_TC013311] [Chromosome: LG5] [Map Location: ] [Description: choline-phosphate cytidylyltransferase A] [Gene Type: protein-coding]","LOC658283; TcasGA2_TC013311"]
[608,"NC_007420.3",11286195,"SNV","G","A","Homozygous",27,27,100,1,14,13,0.48,35.93,27,27,8,13,null,1,1,"no","A/A","No",1,103.55,"XP_015836057.1:c.[923C>T]; XP_008193942.1:c.[923C>T]; XP_008193941.1:c.[923C>T]","XP_015836057.1:p.[Ala308Val]; XP_008193942.1:p.[Ala308Val]; XP_008193941.1:p.[Ala308Val]","LOC659462",659462,null,"659462 [Gene Symbol: LOC659462] [Locus Tag: TcasGA2_TC013303] [Chromosome: LG5] [Map Location: ] [Description: neural Wiskott-Aldrich syndrome protein] [Gene Type: protein-coding]","LOC659462; TcasGA2_TC013303"]
[609,"NC_007420.3","11309219^11309220","Insertion","-","TTT","Heterozygous",12,23,52.17,1,7,12,0.37,37.78,19,30,9,10,3.37,0.61,0.77,"no","complex","Yes",3,200,"XP_015836105.1:c.[252_253insTTT]; XP_015836102.1:c.[252_253insTTT]; XP_015836107.1:c.[252_253insTTT]; XP_015836103.1:c.[252_253insTTT]; XP_015836106.1:c.[252_253insTTT]; XP_015836104.1:c.[252_253insTTT]","XP_015836105.1:p.[Phe85_Pro86insPhe]; XP_015836102.1:p.[Phe85_Pro86insPhe]; XP_015836107.1:p.[Phe85_Pro86insPhe]; XP_015836103.1:p.[Phe85_Pro86insPhe]; XP_015836106.1:p.[Phe85_Pro86insPhe]; XP_015836104.1:p.[Phe85_Pro86insPhe]","LOC107398017",107398017,null,"107398017 [Gene Symbol: LOC107398017] [Locus Tag: TcasGA2_TC014504] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC107398017; TcasGA2_TC014504"]
[610,"NC_007420.3",11363627,"SNV","A","G","Homozygous",23,23,100,1,5,23,0.18,36,28,28,7,11,null,1,1,"no","G/G","No",1,89.91,"XP_966730.2:c.41A>G","XP_966730.2:p.Asp14Gly","LOC655128",655128,null,"655128 [Gene Symbol: LOC655128] [Locus Tag: TcasGA2_TC014541] [Chromosome: LG5] [Map Location: ] [Description: cysteine and histidine-rich protein 1] [Gene Type: protein-coding]","TcasGA2_TC014541; LOC655128"]
[612,"NC_007420.3","11494057..11494058","MNV","TA","AT","Homozygous",22,22,100,1,13,12,0.48,38.12,25,25,9,14,null,1,1,"no","AT/AT","No",1,200,"XP_008193971.1:c.[159+1499_159+1500delTAinsAT]; XP_008193970.1:c.[1213_1214delTAinsAT]","XP_008193970.1:p.Tyr405Ile","LOC103313181, LOC103313180","103313181 , 103313180",null,"103313181 [Gene Symbol: LOC103313181] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: von Willebrand factor A domain-containing protein 9] [Gene Type: protein-coding] || 103313180 [Gene Symbol: LOC103313180] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: dnaJ homolog subfamily C member 2] [Gene Type: protein-coding]","LOC103313181 || LOC103313180"]
[613,"NC_007420.3",11494097,"SNV","G","A","Heterozygous",9,20,45,1,4,7,0.36,37.67,11,24,6,6,-1.67,0.72,0.72,"no","complex","No",1,200,"XP_008193971.1:c.[159+1460C>T]; XP_008193970.1:c.[1174C>T]","XP_008193970.1:p.Pro392Ser","LOC103313181, LOC103313180","103313181 , 103313180",null,"103313181 [Gene Symbol: LOC103313181] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: von Willebrand factor A domain-containing protein 9] [Gene Type: protein-coding] || 103313180 [Gene Symbol: LOC103313180] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: dnaJ homolog subfamily C member 2] [Gene Type: protein-coding]","LOC103313181 || LOC103313180"]
[615,"NC_007420.3",11616042,"SNV","T","A","Homozygous",27,27,100,1,21,11,0.34,38.44,32,32,11,15,null,1,1,"no","A/A","No",1,103.55,"XP_008193995.1:c.[347A>T]; XP_008193996.1:c.[706-1843A>T]; XP_008193997.1:c.[706-1843A>T]","XP_008193995.1:p.Asn116Ile","LOC103313188, LOC655605","103313188 , 655605",null,"103313188 [Gene Symbol: LOC103313188] [Locus Tag: TcasGA2_TC013242] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313188] [Gene Type: protein-coding] || 655605 [Gene Symbol: LOC655605] [Locus Tag: TcasGA2_TC013243] [Chromosome: LG5] [Map Location: ] [Description: protein D2] [Gene Type: protein-coding]","TcasGA2_TC013242; LOC103313188 || TcasGA2_TC013243; LOC655605"]
[616,"NC_007420.3",11911486,"SNV","T","C","Heterozygous",13,34,38.24,1,5,12,0.29,36.69,17,38,6,7,-2.41,0.09,0.55,"no","C/T","No",1,85.78,"XP_008194015.1:c.779T>C","XP_008194015.1:p.Met260Thr","LOC103313192",103313192,null,"103313192 [Gene Symbol: LOC103313192] [Locus Tag: TcasGA2_TC014573] [Chromosome: LG5] [Map Location: ] [Description: cGMP-dependent protein kinase, isozyme 1] [Gene Type: protein-coding]","TcasGA2_TC014573; LOC103313192"]
[617,"NC_007420.3",12131016,"SNV","T","G","Homozygous",24,24,100,1,7,17,0.29,37.38,24,24,7,15,null,1,1,"no","G/G","No",1,92.92,"XP_008194030.2:c.1996A>C","XP_008194030.2:p.Lys666Gln","LOC100141837",100141837,null,"100141837 [Gene Symbol: LOC100141837] [Locus Tag: TcasGA2_TC013215] [Chromosome: LG5] [Map Location: ] [Description: neprilysin-2] [Gene Type: protein-coding]","TcasGA2_TC013215; LOC100141837"]
[618,"NC_007420.3",12131036,"SNV","C","T","Homozygous",20,20,100,1,9,11,0.45,36.35,20,20,8,13,null,1,1,"no","T/T","No",1,82.52,"XP_008194030.2:c.1976G>A","XP_008194030.2:p.Ser659Asn","LOC100141837",100141837,null,"100141837 [Gene Symbol: LOC100141837] [Locus Tag: TcasGA2_TC013215] [Chromosome: LG5] [Map Location: ] [Description: neprilysin-2] [Gene Type: protein-coding]","TcasGA2_TC013215; LOC100141837"]
[620,"NC_007420.3",12339781,"SNV","C","T","Heterozygous",8,22,36.36,1,0,8,0,37.12,8,27,2,5,1.23,0.07,0.36,"no","C/T","No",1,53.72,"XP_008194232.2:c.1243G>A","XP_008194232.2:p.Ala415Thr","LOC656518",656518,null,"656518 [Gene Symbol: LOC656518] [Locus Tag: TcasGA2_TC013204] [Chromosome: LG5] [Map Location: ] [Description: cleavage stimulation factor subunit 1] [Gene Type: protein-coding]","TcasGA2_TC013204; LOC656518"]
[622,"NC_007420.3",12447401,"SNV","A","C","Homozygous",26,27,96.3,1,5,23,0.18,36.77,28,29,10,15,null,1,1,"no","C/C","No",1,69.86,"XP_015836042.1:c.49T>G","XP_015836042.1:p.Ser17Ala","LOC657495",657495,null,"657495 [Gene Symbol: LOC657495] [Locus Tag: TcasGA2_TC013196] [Chromosome: LG5] [Map Location: ] [Description: insulin-like growth factor-binding protein complex acid labile subunit] [Gene Type: protein-coding]","LOC657495; TcasGA2_TC013196"]
[623,"NC_007420.3",12646676,"SNV","G","T","Heterozygous",9,20,45,1,9,0,0,37,9,22,4,8,-0.87,0.28,0.17,"no","G/T","No",1,67.22,"XP_008194273.1:c.294G>T","XP_008194273.1:p.Gln98His","LOC659724",659724,null,"659724 [Gene Symbol: LOC659724] [Locus Tag: TcasGA2_TC014633] [Chromosome: LG5] [Map Location: ] [Description: WD repeat-containing protein 59] [Gene Type: protein-coding]","LOC659724; TcasGA2_TC014633"]
[624,"NC_007420.3","12670964^12670965","Insertion","-","ATT","Heterozygous",21,33,63.64,1,15,9,0.38,36.59,24,41,14,12,1.32,0.68,1,"no","complex","No",1,200,"XP_008194275.1:c.[2_3insAAT]; XP_971217.2:c.[2_3insAAT]","XP_008194275.1:p.[gap0_Met1insIle]; XP_971217.2:p.[gap0_Met1insIle]","LOC659857, LOC100142293","659857 , 100142293",null,"659857 [Gene Symbol: LOC659857] [Locus Tag: TcasGA2_TC030762] [Chromosome: LG5] [Map Location: ] [Description: histone H4 transcription factor] [Gene Type: protein-coding] || 100142293 [Gene Symbol: LOC100142293] [Locus Tag: TcasGA2_TC030653] [Chromosome: LG5] [Map Location: ] [Description: mitotic spindle assembly checkpoint protein MAD2B] [Gene Type: protein-coding]","LOC659857; TcasGA2_TC030762 || LOC100142293; TcasGA2_TC030653"]
[627,"NC_007420.3",12685471,"SNV","A","G","Homozygous",22,22,100,1,5,20,0.2,36.68,25,25,9,12,null,1,1,"no","G/G","No",1,86.9,"XP_008194279.1:c.304A>G","XP_008194279.1:p.Asn102Asp","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[628,"NC_007420.3",12687493,"SNV","G","C","Homozygous",26,26,100,1,17,12,0.41,38.15,29,29,8,17,null,1,1,"no","C/C","No",1,98.94,"XP_008194279.1:c.2110G>C","XP_008194279.1:p.Ala704Pro","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[629,"NC_007420.3",12688693,"SNV","G","A","Heterozygous",13,25,52,1,1,13,0.07,36.46,14,26,4,5,-0.92,0.07,0.34,"no","A/G","No",1,97.65,"XP_008194279.1:c.3218G>A","XP_008194279.1:p.Ser1073Asn","LOC660112",660112,null,"660112 [Gene Symbol: LOC660112] [Locus Tag: TcasGA2_TC014637] [Chromosome: LG5] [Map Location: ] [Description: fibril-forming collagen alpha chain] [Gene Type: protein-coding]","TcasGA2_TC014637; LOC660112"]
[631,"NC_007420.3",12704459,"SNV","T","C","Heterozygous",17,33,51.52,1,5,12,0.29,35.41,17,35,2,5,-2.16,0.05,0.72,"no","C/T","No",1,124.78,"XP_001812538.1:c.[517A>G]; XP_008194283.1:c.[517A>G]; XP_008194282.1:c.[517A>G]","XP_001812538.1:p.[Asn173Asp]; XP_008194283.1:p.[Asn173Asp]; XP_008194282.1:p.[Asn173Asp]","LOC100142152",100142152,null,"100142152 [Gene Symbol: LOC100142152] [Locus Tag: TcasGA2_TC030773] [Chromosome: LG5] [Map Location: ] [Description: nucleolin 1] [Gene Type: protein-coding]","LOC100142152; TcasGA2_TC030773"]
[632,"NC_007420.3",12709311,"SNV","T","C","Homozygous",29,29,100,1,21,17,0.45,37.83,38,38,12,13,null,1,1,"no","C/C","No",1,107.97,"XP_001812575.1:c.[193A>G]; XP_008194284.1:c.[193A>G]","XP_001812575.1:p.[Asn65Asp]; XP_008194284.1:p.[Asn65Asp]","LOC100141954",100141954,null,"100141954 [Gene Symbol: LOC100141954] [Locus Tag: TcasGA2_TC030661] [Chromosome: LG5] [Map Location: ] [Description: sorting nexin-13] [Gene Type: protein-coding]","LOC100141954; TcasGA2_TC030661"]
[633,"NC_007420.3",12730146,"SNV","A","G","Homozygous",21,21,100,1,13,9,0.41,37.81,22,22,7,15,null,1,1,"no","G/G","No",1,83.88,"XP_008194294.1:c.1435T>C","XP_008194294.1:p.Phe479Leu","LOC103313251",103313251,null,"103313251 [Gene Symbol: LOC103313251] [Locus Tag: TcasGA2_TC013173] [Chromosome: LG5] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC013173; LOC103313251"]
[634,"NC_007420.3",12739445,"SNV","A","T","Homozygous",27,27,100,1,10,17,0.37,37.44,27,27,9,8,null,1,1,"no","T/T","No",1,100.57,"XP_015836003.1:c.[1538+126T>A]; XP_015836001.1:c.[1332T>A]; XP_015836000.1:c.[1419T>A]; XP_015835999.1:c.[1467T>A]; XP_015836002.1:c.[1586+126T>A]; XP_015836004.1:c.[1451+126T>A]","XP_015836001.1:p.[Asp444Glu]; XP_015836000.1:p.[Asp473Glu]; XP_015835999.1:p.[Asp489Glu]","LOC658986",658986,null,"658986 [Gene Symbol: LOC658986] [Locus Tag: TcasGA2_TC013172] [Chromosome: LG5] [Map Location: ] [Description: PDZ and LIM domain protein Zasp] [Gene Type: protein-coding]","TcasGA2_TC013172; LOC658986"]
[636,"NC_007420.3",12820100,"SNV","A","G","Heterozygous",8,20,40,1,4,4,0.5,38.25,8,23,4,4,0.58,0.43,0.86,"no","A/G","No",1,60.84,"XP_001813222.2:c.1837A>G","XP_001813222.2:p.Met613Val","LOC660483",660483,null,"660483 [Gene Symbol: LOC660483] [Locus Tag: TcasGA2_TC014648] [Chromosome: LG5] [Map Location: ] [Description: peroxisome biogenesis protein 1] [Gene Type: protein-coding]","LOC660483; TcasGA2_TC014648"]
[638,"NC_007420.3",13159945,"SNV","A","T","Homozygous",22,22,100,1,9,14,0.39,37.91,23,23,9,13,null,1,1,"no","T/T","No",1,88.54,"XP_015835945.1:c.1083A>T","XP_015835945.1:p.Glu361Asp","LOC661594",661594,null,"661594 [Gene Symbol: LOC661594] [Locus Tag: TcasGA2_TC014664] [Chromosome: LG5] [Map Location: ] [Description: CD109 antigen] [Gene Type: protein-coding]","LOC661594; TcasGA2_TC014664"]
[641,"NC_007420.3",13363021,"SNV","G","T","Heterozygous",15,26,57.69,1,4,14,0.22,37.2,18,34,8,7,1.84,0.89,0.99,"no","G/T","No",1,83.93,"XP_008194323.1:c.[1620G>T]; XP_008194326.1:c.[1605G>T]; XP_973331.2:c.[1620G>T]; XP_008194324.1:c.[1620G>T]","XP_008194323.1:p.[Leu540Phe]; XP_008194326.1:p.[Leu535Phe]; XP_973331.2:p.[Leu540Phe]; XP_008194324.1:p.[Leu540Phe]","LOC662121",662121,null,"662121 [Gene Symbol: LOC662121] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC662121] [Gene Type: protein-coding]","LOC662121"]
[644,"NC_007420.3",13383701,"SNV","T","G","Heterozygous",12,23,52.17,1,8,4,0.33,39.58,12,25,4,7,0.52,0.62,1,"no","G/T","No",1,84.38,"XP_015835907.1:c.[124T>G]; XP_008194331.1:c.[124T>G]","XP_015835907.1:p.[Trp42Gly]; XP_008194331.1:p.[Trp42Gly]","LOC103313264",103313264,null,"103313264 [Gene Symbol: LOC103313264] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC103313264] [Gene Type: protein-coding]","LOC103313264"]
[645,"NC_007420.3",13544110,"SNV","A","T","Heterozygous",14,23,60.87,1,10,4,0.29,36.93,14,23,6,9,-0.06,0.75,0.99,"no","A/T","No",1,63.72,"XP_001814936.2:c.[4568+952A>T]; XP_015835761.1:c.[943T>A]","XP_015835761.1:p.Cys315Ser","LOC100141883, LOC100142094","100141883 , 100142094",null,"100141883 [Gene Symbol: LOC100141883] [Locus Tag: TcasGA2_TC014698] [Chromosome: LG5] [Map Location: ] [Description: multiple epidermal growth factor-like domains protein 8] [Gene Type: protein-coding] || 100142094 [Gene Symbol: LOC100142094] [Locus Tag: TcasGA2_TC013116] [Chromosome: LG5] [Map Location: ] [Description: sperm-associated antigen 1] [Gene Type: protein-coding]","TcasGA2_TC014698; LOC100141883 || TcasGA2_TC013116; LOC100142094"]
[646,"NC_007420.3",13551101,"Replacement","G","AA","Heterozygous",8,24,33.33,1,0,8,0,40.12,8,27,2,3,2.33,0.04,0.43,"no","complex","No",1,200,"XP_974528.1:c.355delGinsAA","XP_974528.1:p.Val119fs","LOC663384",663384,null,"663384 [Gene Symbol: LOC663384] [Locus Tag: TcasGA2_TC014699] [Chromosome: LG5] [Map Location: ] [Description: 5-demethoxyubiquinone hydroxylase, mitochondrial] [Gene Type: protein-coding]","LOC663384; TcasGA2_TC014699"]
[648,"NC_007420.3","13566269..13566270","MNV","GT","AC","Heterozygous",13,25,52,1,9,8,0.47,36.83,17,29,7,14,-0.32,0.66,0.87,"no","complex","No",1,200,"XP_015836082.1:c.1954_1955delACinsGT","XP_015836082.1:p.Thr652Val","LOC103313231",103313231,null,"103313231 [Gene Symbol: LOC103313231] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: neprilysin-21-like] [Gene Type: protein-coding]","LOC103313231"]
[649,"NC_007420.3",13654074,"SNV","A","G","Homozygous",21,21,100,1,13,14,0.48,37.1,27,27,8,14,null,1,1,"no","G/G","No",1,83.89,"XP_974681.2:c.[332T>C]; XP_008194361.1:c.[326T>C]; XP_015835689.1:c.[332T>C]","XP_974681.2:p.[Val111Ala]; XP_008194361.1:p.[Val109Ala]; XP_015835689.1:p.[Val111Ala]","LOC663549",663549,null,"663549 [Gene Symbol: LOC663549] [Locus Tag: TcasGA2_TC013108] [Chromosome: LG5] [Map Location: ] [Description: advillin] [Gene Type: protein-coding]","LOC663549; TcasGA2_TC013108"]
[650,"NC_007420.3",13716840,"SNV","G","A","Homozygous",26,26,100,1,12,24,0.33,35.88,36,36,15,11,null,1,1,"no","A/A","No",1,100.54,"XP_015835680.1:c.[9928G>A]; XP_015835679.1:c.[8230G>A]","XP_015835680.1:p.[Asp3310Asn]; XP_015835679.1:p.[Asp2744Asn]","LOC663637",663637,null,"663637 [Gene Symbol: LOC663637] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: dynein heavy chain 7, axonemal] [Gene Type: protein-coding]","LOC663637"]
[651,"NC_007420.3",13717929,"SNV","A","T","Heterozygous",9,24,37.5,1,3,6,0.33,38.22,9,25,3,5,0.42,0.29,0.66,"no","A/T","No",1,60.99,"XP_015835680.1:c.[10872A>T]; XP_015835679.1:c.[9174A>T]","XP_015835680.1:p.[Glu3624Asp]; XP_015835679.1:p.[Glu3058Asp]","LOC663637",663637,null,"663637 [Gene Symbol: LOC663637] [Locus Tag: ] [Chromosome: LG5] [Map Location: ] [Description: dynein heavy chain 7, axonemal] [Gene Type: protein-coding]","LOC663637"]
[652,"NC_007420.3",14005800,"SNV","A","C","Homozygous",29,29,100,1,14,18,0.44,35.17,32,32,11,13,null,1,1,"no","C/C","No",1,104.95,"XP_015835928.1:c.[2416T>G]; XP_015835929.1:c.[2416T>G]; XP_015835930.1:c.[2260T>G]","XP_015835928.1:p.[Ser806Ala]; XP_015835929.1:p.[Ser806Ala]; XP_015835930.1:p.[Ser754Ala]","LOC663865",663865,null,"663865 [Gene Symbol: LOC663865] [Locus Tag: TcasGA2_TC013095] [Chromosome: LG5] [Map Location: ] [Description: neuroligin 2] [Gene Type: protein-coding]","TcasGA2_TC013095; LOC663865; NLG-2"]
[657,"NC_007420.3",14839129,"SNV","G","C","Homozygous",24,24,100,1,15,10,0.4,37.67,25,25,9,15,null,1,1,"no","C/C","No",1,92.92,"XP_015836117.1:c.[8335G>C]; XP_008194080.1:c.[8332G>C]; XP_008194079.1:c.[8338G>C]; XP_015836119.1:c.[8338G>C]","XP_015836117.1:p.[Glu2779Gln]; XP_008194080.1:p.[Glu2778Gln]; XP_008194079.1:p.[Glu2780Gln]; XP_015836119.1:p.[Glu2780Gln]","LOC657573",657573,null,"657573 [Gene Symbol: LOC657573] [Locus Tag: TcasGA2_TC014768] [Chromosome: LG5] [Map Location: ] [Description: uncharacterized LOC657573] [Gene Type: protein-coding]","LOC657573; TcasGA2_TC014768"]
[659,"NC_007420.3",15073270,"SNV","C","T","Homozygous",23,23,100,1,17,15,0.47,36.74,32,32,10,12,null,1,1,"no","T/T","No",1,88.54,"XP_015835700.1:c.[1055G>A]; XP_015835698.1:c.[1055G>A]; XP_015835708.1:c.[1055G>A]; XP_015835701.1:c.[1055G>A]; XP_015835706.1:c.[1055G>A]; XP_015835703.1:c.[1055G>A]; XP_015835697.1:c.[1055G>A]; XP_015835710.1:c.[1055G>A]; XP_015835694.1:c.[1055G>A]; XP_015835702.1:c.[1055G>A]; XP_015835699.1:c.[1055G>A]; XP_015835705.1:c.[1055G>A]; XP_015835695.1:c.[1055G>A]; XP_015835709.1:c.[1055G>A]; XP_015835707.1:c.[1055G>A]; XP_015835696.1:c.[1055G>A]; XP_015835704.1:c.[1055G>A]","XP_015835700.1:p.[Ser352Asn]; XP_015835698.1:p.[Ser352Asn]; XP_015835708.1:p.[Ser352Asn]; XP_015835701.1:p.[Ser352Asn]; XP_015835706.1:p.[Ser352Asn]; XP_015835703.1:p.[Ser352Asn]; XP_015835697.1:p.[Ser352Asn]; XP_015835710.1:p.[Ser352Asn]; XP_015835694.1:p.[Ser352Asn]; XP_015835702.1:p.[Ser352Asn]; XP_015835699.1:p.[Ser352Asn]; XP_015835705.1:p.[Ser352Asn]; XP_015835695.1:p.[Ser352Asn]; XP_015835709.1:p.[Ser352Asn]; XP_015835707.1:p.[Ser352Asn]; XP_015835696.1:p.[Ser352Asn]; XP_015835704.1:p.[Ser352Asn]","LOC100141714",100141714,null,"100141714 [Gene Symbol: LOC100141714] [Locus Tag: TcasGA2_TC013022] [Chromosome: LG5] [Map Location: LG5|LG5] [Description: coiled-coil domain-containing protein AGAP005037] [Gene Type: protein-coding]","TcasGA2_TC013022; LOC100141714"]
[661,"NC_007421.3",225708,"SNV","T","C","Homozygous",23,23,100,1,10,19,0.34,38.43,29,29,7,6,null,1,1,"no","C/C","No",1,86.9,"XP_008194480.2:c.2500A>G","XP_008194480.2:p.Thr834Ala","LOC658944",658944,null,"658944 [Gene Symbol: LOC658944] [Locus Tag: TcasGA2_TC015340] [Chromosome: LG6] [Map Location: ] [Description: fatty acid synthase] [Gene Type: protein-coding]","TcasGA2_TC015340; LOC658944"]
[662,"NC_007421.3",225727,"SNV","T","A","Homozygous",20,20,100,1,8,19,0.3,39.9,27,27,6,6,null,1,1,"no","A/A","No",1,82.49,"XP_008194480.2:c.2481A>T","XP_008194480.2:p.Leu827Phe","LOC658944",658944,null,"658944 [Gene Symbol: LOC658944] [Locus Tag: TcasGA2_TC015340] [Chromosome: LG6] [Map Location: ] [Description: fatty acid synthase] [Gene Type: protein-coding]","TcasGA2_TC015340; LOC658944"]
[665,"NC_007421.3","404257..404258","MNV","TA","AC","Heterozygous",13,22,59.09,1,13,2,0.13,35.29,15,28,6,10,-1.48,0.75,0.9,"no","complex","No",1,200,"XP_971859.1:c.273_274delTAinsAC","XP_971859.1:p.Asn91_Thr92delinsLysPro","LOC660543",660543,null,"660543 [Gene Symbol: LOC660543] [Locus Tag: TcasGA2_TC015403] [Chromosome: LG6] [Map Location: ] [Description: structure-specific endonuclease subunit slx1] [Gene Type: protein-coding]","LOC660543; TcasGA2_TC015403"]
[666,"NC_007421.3",498001,"SNV","A","T","Homozygous",25,25,100,1,19,10,0.34,37.52,29,29,7,15,null,1,1,"no","T/T","No",1,94.56,"XP_972276.1:c.790A>T","XP_972276.1:p.Asn264Tyr","LOC661052, LOC660992","661052 , 660992",null,"661052 [Gene Symbol: LOC661052] [Locus Tag: TcasGA2_TC015408] [Chromosome: LG6] [Map Location: ] [Description: mevalonate kinase] [Gene Type: protein-coding] || 660992 [Gene Symbol: LOC660992] [Locus Tag: TcasGA2_TC015407] [Chromosome: LG6] [Map Location: ] [Description: dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase] [Gene Type: protein-coding]","TcasGA2_TC015408; LOC661052 || TcasGA2_TC015407; LOC660992"]
[667,"NC_007421.3",587953,"SNV","C","T","Homozygous",21,21,100,1,13,11,0.46,36.52,24,24,8,11,null,1,1,"no","T/T","No",1,85.53,"XP_001814107.1:c.1417G>A","XP_001814107.1:p.Asp473Asn","LOC100142538",100142538,null,"100142538 [Gene Symbol: LOC100142538] [Locus Tag: TcasGA2_TC015314] [Chromosome: LG6] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100142538; TcasGA2_TC015314"]
[668,"NC_007421.3",587965,"SNV","C","T","Heterozygous",12,22,54.55,1,3,9,0.25,37.58,12,25,2,6,2.97,0.57,0.44,"no","C/T","No",1,80.88,"XP_001814107.1:c.1405G>A","XP_001814107.1:p.Glu469Lys","LOC100142538",100142538,null,"100142538 [Gene Symbol: LOC100142538] [Locus Tag: TcasGA2_TC015314] [Chromosome: LG6] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100142538; TcasGA2_TC015314"]
[670,"NC_007421.3",588649,"SNV","C","G","Homozygous",25,25,100,1,19,7,0.27,36.84,26,26,8,17,null,1,1,"no","G/G","No",1,95.93,"XP_001814107.1:c.721G>C","XP_001814107.1:p.Ala241Pro","LOC100142538",100142538,null,"100142538 [Gene Symbol: LOC100142538] [Locus Tag: TcasGA2_TC015314] [Chromosome: LG6] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100142538; TcasGA2_TC015314"]
[671,"NC_007421.3",605475,"SNV","T","C","Heterozygous",10,23,43.48,1,0,10,0,37.9,10,23,4,5,1.95,0.12,0.05,"no","C/T","No",1,78.08,"XP_001814158.1:c.529A>G","XP_001814158.1:p.Thr177Ala","LOC100142136",100142136,null,"100142136 [Gene Symbol: LOC100142136] [Locus Tag: TcasGA2_TC015313] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142136] [Gene Type: protein-coding]","LOC100142136; TcasGA2_TC015313"]
[672,"NC_007421.3",614484,"SNV","G","A","Heterozygous",12,20,60,1,6,10,0.38,37.17,16,24,6,4,-1.23,0.11,0.62,"no","A/G","No",1,60.87,"XP_001814185.2:c.[482G>A]; XP_008194502.1:c.[482G>A]; XP_015836198.1:c.[482G>A]; XP_008194503.1:c.[482G>A]; XP_015836200.1:c.[482G>A]; XP_008194504.1:c.[41G>A]","XP_001814185.2:p.[Ser161Asn]; XP_008194502.1:p.[Ser161Asn]; XP_015836198.1:p.[Ser161Asn]; XP_008194503.1:p.[Ser161Asn]; XP_015836200.1:p.[Ser161Asn]; XP_008194504.1:p.[Ser14Asn]","LOC100141937",100141937,null,"100141937 [Gene Symbol: LOC100141937] [Locus Tag: TcasGA2_TC015419] [Chromosome: LG6] [Map Location: ] [Description: biotin--protein ligase] [Gene Type: protein-coding]","TcasGA2_TC015419; LOC100141937"]
[673,"NC_007421.3",733293,"SNV","G","C","Heterozygous",13,26,50,1,6,11,0.35,36.92,17,30,8,5,0.67,0.04,0.31,"no","C/G","No",1,103.92,"XP_001814494.2:c.24G>C","XP_001814494.2:p.Leu8Phe","LOC100141658",100141658,null,"100141658 [Gene Symbol: LOC100141658] [Locus Tag: TcasGA2_TC015423] [Chromosome: LG6] [Map Location: ] [Description: probable multidrug resistance-associated protein lethal(2)03659] [Gene Type: protein-coding]","LOC100141658; TcasGA2_TC015423"]
[674,"NC_007421.3",931189,"SNV","G","T","Homozygous",22,22,100,1,6,21,0.22,37.68,27,27,9,9,null,1,1,"no","T/T","No",1,88.54,"XP_015836193.1:c.1976C>A","XP_015836193.1:p.Ala659Glu","LOC662514",662514,null,"662514 [Gene Symbol: LOC662514] [Locus Tag: TcasGA2_TC015286] [Chromosome: LG6] [Map Location: LG6|LG6] [Description: uncharacterized LOC662514] [Gene Type: protein-coding]","LOC662514; TcasGA2_TC015286"]
[676,"NC_007421.3",969794,"SNV","T","C","Homozygous",19,20,95,1,6,13,0.32,38.58,19,20,7,11,null,0.99,1,"no","C/C","No",1,50.28,"XP_008194565.1:c.[2098A>G]; XP_015836335.1:c.[1417A>G]; XP_008194566.1:c.[1828A>G]","XP_008194565.1:p.[Thr700Ala]; XP_015836335.1:p.[Thr473Ala]; XP_008194566.1:p.[Thr610Ala]","LOC654933",654933,null,"654933 [Gene Symbol: LOC654933] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: myosin 18] [Gene Type: protein-coding]","LOC654933; Myo18"]
[679,"NC_007421.3",1648319,"SNV","A","C","Heterozygous",9,23,39.13,1,0,9,0,35.56,9,27,4,4,-0.69,0.35,0.16,"no","A/C","No",1,66.95,"XP_974227.1:c.565T>G","XP_974227.1:p.Ser189Ala","LOC663073",663073,null,"663073 [Gene Symbol: LOC663073] [Locus Tag: TcasGA2_TC015197] [Chromosome: LG6] [Map Location: ] [Description: centromere protein J] [Gene Type: protein-coding]","TcasGA2_TC015197; LOC663073"]
[680,"NC_007421.3",1650390,"SNV","T","A","Homozygous",22,22,100,1,21,7,0.25,36.32,28,28,6,13,null,1,1,"no","A/A","No",1,88.51,"XP_015836343.1:c.[720T>A]; XP_015836344.1:c.[675T>A]","XP_015836343.1:p.[Asp240Glu]; XP_015836344.1:p.[Asp225Glu]","LOC663099",663099,null,"663099 [Gene Symbol: LOC663099] [Locus Tag: TcasGA2_TC015513] [Chromosome: LG6] [Map Location: ] [Description: rhomboid-4] [Gene Type: protein-coding]","rho-4; TcasGA2_TC015513; LOC663099"]
[682,"NC_007421.3",2018980,"SNV","A","G","Homozygous",23,23,100,1,2,23,0.08,38.74,25,25,6,10,null,1,1,"no","G/G","No",1,89.91,"XP_966816.1:c.2380A>G","XP_966816.1:p.Ile794Val","LOC655207",655207,null,"655207 [Gene Symbol: LOC655207] [Locus Tag: TcasGA2_TC015532] [Chromosome: LG6] [Map Location: ] [Description: carboxypeptidase D] [Gene Type: protein-coding]","TcasGA2_TC015532; LOC655207"]
[683,"NC_007421.3","2038429..2038431","Deletion","CGT","-","Heterozygous",16,28,57.14,1,11,5,0.31,37.25,16,29,7,14,-3.53,0.36,0.73,"no","complex","No",1,200,"XP_008201593.1:c.[1472_1474delCGT]; XP_008201602.1:c.[1364_1366delCGT]; XP_008201596.1:c.[1463_1465delCGT]","XP_008201593.1:p.[Ser493del]; XP_008201602.1:p.[Ser457del]; XP_008201596.1:p.[Ser490del]","LOC103315223",103315223,null,"103315223 [Gene Symbol: LOC103315223] [Locus Tag: TcasGA2_TC015535] [Chromosome: LG6] [Map Location: ] [Description: putative mediator of RNA polymerase II transcription subunit 26] [Gene Type: protein-coding]","LOC103315223; TcasGA2_TC015535"]
[686,"NC_007421.3",2132364,"SNV","G","T","Homozygous",25,25,100,1,13,12,0.48,39,25,25,6,15,null,1,1,"no","T/T","No",1,97.56,"XP_008190317.1:c.[4156C>A]; XP_008190308.1:c.[4165C>A]; XP_008190313.1:c.[4162C>A]; XP_008190304.1:c.[4165C>A]","XP_008190317.1:p.[Arg1386Ser]; XP_008190308.1:p.[Arg1389Ser]; XP_008190313.1:p.[Arg1388Ser]; XP_008190304.1:p.[Arg1389Ser]","LOC657418",657418,null,"657418 [Gene Symbol: LOC657418] [Locus Tag: TcasGA2_TC015164] [Chromosome: LG6] [Map Location: ] [Description: ankyrin repeat domain-containing protein 50] [Gene Type: protein-coding]","TcasGA2_TC015164; LOC657418"]
[688,"NC_007421.3",2192930,"SNV","C","T","Heterozygous",9,20,45,1,6,3,0.33,38.44,9,20,5,5,-0.15,0.18,0.84,"no","C/T","No",1,71.96,"XP_015836266.1:c.1144C>T","XP_015836266.1:p.Arg382Cys","LOC658048",658048,null,"658048 [Gene Symbol: LOC658048] [Locus Tag: TcasGA2_TC015551] [Chromosome: LG6] [Map Location: ] [Description: cytochrome P450 6a9] [Gene Type: protein-coding]","LOC658048; CYP6BK14; TcasGA2_TC015551"]
[689,"NC_007421.3","2280898..2280899","MNV","TG","CA","Heterozygous",5,20,25,1,0,5,0,38,5,25,2,4,1.72,0.13,0.24,"no","complex","No",1,200,"XP_008190442.1:c.36_37delCAinsTG","XP_008190442.1:p.Ile13Val","LOC659018, LOC103312193","659018 , 103312193",null,"659018 [Gene Symbol: LOC659018] [Locus Tag: TcasGA2_TC015557] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC659018] [Gene Type: protein-coding] || 103312193 [Gene Symbol: LOC103312193] [Locus Tag: TcasGA2_TC015155] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC659018; TcasGA2_TC015557 || LOC103312193; TcasGA2_TC015155"]
[690,"NC_007421.3",2297996,"SNV","A","T","Heterozygous",11,25,44,1,4,10,0.29,36.36,14,30,5,4,-0.77,0.68,0.9,"no","A/T","No",1,83.75,"XP_970450.1:c.[659A>T]; XP_008190453.1:c.[659A>T]; XP_015836362.1:c.[659A>T]","XP_970450.1:p.[Tyr220Phe]; XP_008190453.1:p.[Tyr220Phe]; XP_015836362.1:p.[Tyr220Phe]","LOC659018",659018,null,"659018 [Gene Symbol: LOC659018] [Locus Tag: TcasGA2_TC015557] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC659018] [Gene Type: protein-coding]","LOC659018; TcasGA2_TC015557"]
[691,"NC_007421.3",2321182,"SNV","A","G","Homozygous",38,38,100,1,17,22,0.44,39.08,39,39,13,20,null,1,1,"no","G/G","No",1,135.01,"XP_008190481.1:c.[1494+23A>G]; XP_008190476.1:c.[1517A>G]","XP_008190476.1:p.Lys506Arg","LOC103312202",103312202,null,"103312202 [Gene Symbol: LOC103312202] [Locus Tag: TcasGA2_TC015562] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103312202; TcasGA2_TC015562"]
[693,"NC_007421.3",2405823,"SNV","G","C","Homozygous",31,31,100,1,23,13,0.36,37.23,36,36,11,18,null,1,1,"no","C/C","No",1,113.98,"XP_015836307.1:c.550C>G","XP_015836307.1:p.Pro184Ala","LOC107398059",107398059,null,"107398059 [Gene Symbol: LOC107398059] [Locus Tag: TcasGA2_TC015145] [Chromosome: LG6] [Map Location: ] [Description: keratin-associated protein 9-1-like] [Gene Type: protein-coding]","LOC107398059; TcasGA2_TC015145"]
[694,"NC_007421.3",2451777,"SNV","A","G","Homozygous",22,22,100,1,15,7,0.32,39.5,22,22,4,13,null,1,1,"no","G/G","No",1,86.89,"XP_008190620.1:c.[3503T>C]; XP_008190626.1:c.[3461T>C]","XP_008190620.1:p.[Val1168Ala]; XP_008190626.1:p.[Val1154Ala]","LOC661054, LOC660604","661054 , 660604",null,"661054 [Gene Symbol: LOC661054] [Locus Tag: TcasGA2_TC015569] [Chromosome: LG6] [Map Location: ] [Description: inter-alpha-trypsin inhibitor heavy chain H4] [Gene Type: protein-coding] || 660604 [Gene Symbol: LOC660604] [Locus Tag: TcasGA2_TC015138] [Chromosome: LG6] [Map Location: ] [Description: A disintegrin and metalloproteinase with thrombospondin motifs 9] [Gene Type: protein-coding]","LOC661054; TcasGA2_TC015569 || LOC660604; TcasGA2_TC015138; ADAMTS9"]
[696,"NC_007421.3",2706646,"SNV","T","C","Homozygous",25,25,100,1,22,10,0.31,37.16,32,32,11,18,null,1,1,"no","C/C","No",1,95.93,"XP_973265.1:c.424A>G","XP_973265.1:p.Ile142Val","LOC662049",662049,null,"662049 [Gene Symbol: LOC662049] [Locus Tag: TcasGA2_TC015584] [Chromosome: LG6] [Map Location: ] [Description: ribosome biogenesis protein BOP1 homolog] [Gene Type: protein-coding]","LOC662049; TcasGA2_TC015584"]
[697,"NC_007421.3",2706882,"SNV","T","A","Heterozygous",19,25,76,1,9,11,0.45,37.21,20,26,9,9,-0.54,0.59,0.94,"no","complex","No",1,200,"XP_973265.1:c.188A>T","XP_973265.1:p.Asp63Val","LOC662049",662049,null,"662049 [Gene Symbol: LOC662049] [Locus Tag: TcasGA2_TC015584] [Chromosome: LG6] [Map Location: ] [Description: ribosome biogenesis protein BOP1 homolog] [Gene Type: protein-coding]","LOC662049; TcasGA2_TC015584"]
[699,"NC_007421.3",2794378,"SNV","G","A","Heterozygous",8,20,40,1,6,3,0.33,37.25,9,24,3,5,2.35,0.88,1,"no","A/G","No",1,59.27,"XP_008194700.1:c.6832G>A","XP_008194700.1:p.Ala2278Thr","LOC662012, LOC661642","662012 , 661642",null,"662012 [Gene Symbol: LOC662012] [Locus Tag: TcasGA2_TC015581] [Chromosome: LG6] [Map Location: ] [Description: protein neuralized] [Gene Type: protein-coding] || 661642 [Gene Symbol: LOC661642] [Locus Tag: TcasGA2_TC015132] [Chromosome: LG6] [Map Location: ] [Description: tetratricopeptide repeat protein 28] [Gene Type: protein-coding]","TcasGA2_TC015581; LOC662012 || LOC661642; TcasGA2_TC015132"]
[700,"NC_007421.3",2794444,"SNV","G","A","Homozygous",21,21,100,1,5,17,0.23,38.05,22,22,10,11,null,1,1,"no","A/A","No",1,85.5,"XP_008194700.1:c.6898G>A","XP_008194700.1:p.Val2300Ile","LOC662012, LOC661642","662012 , 661642",null,"662012 [Gene Symbol: LOC662012] [Locus Tag: TcasGA2_TC015581] [Chromosome: LG6] [Map Location: ] [Description: protein neuralized] [Gene Type: protein-coding] || 661642 [Gene Symbol: LOC661642] [Locus Tag: TcasGA2_TC015132] [Chromosome: LG6] [Map Location: ] [Description: tetratricopeptide repeat protein 28] [Gene Type: protein-coding]","TcasGA2_TC015581; LOC662012 || LOC661642; TcasGA2_TC015132"]
[702,"NC_007421.3","3325610..3325611","MNV","CA","GT","Homozygous",18,21,85.71,1,11,11,0.5,37.08,22,25,7,14,null,1,1,"no","GT/GT","No",1,200,"XP_008194723.1:c.160_161delTGinsAC","XP_008194723.1:p.Cys54Thr","LOC657029",657029,null,"657029 [Gene Symbol: LOC657029] [Locus Tag: TcasGA2_TC015101] [Chromosome: LG6] [Map Location: ] [Description: farnesol dehydrogenase] [Gene Type: protein-coding]","LOC657029; TcasGA2_TC015101"]
[704,"NC_007421.3",3419947,"SNV","T","G","Homozygous",22,22,100,1,12,16,0.43,36.91,28,28,8,12,null,1,1,"no","G/G","No",1,86.9,"XP_008194738.1:c.[1337T>G]; XP_008194736.1:c.[1337T>G]; XP_008194737.1:c.[1337T>G]","XP_008194738.1:p.[Leu446Arg]; XP_008194736.1:p.[Leu446Arg]; XP_008194737.1:p.[Leu446Arg]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[705,"NC_007421.3","3419972^3419973","Insertion","-","A","Heterozygous",12,24,50,1,8,11,0.42,35.58,19,32,5,7,-3.32,0.78,1,"no","-/A","No",1,95.68,"XP_008194738.1:c.[1362_1363insA]; XP_008194736.1:c.[1362_1363insA]; XP_008194737.1:c.[1362_1363insA]","XP_008194738.1:p.[Ile455fs]; XP_008194736.1:p.[Ile455fs]; XP_008194737.1:p.[Ile455fs]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[706,"NC_007421.3","3419974^3419975","Insertion","-","TG","Heterozygous",10,22,45.45,1,6,9,0.4,36.17,15,28,5,7,null,0.28,1,"no","complex","No",1,200,"XP_008194737.1:c.[1364_1365insTG]; XP_008194736.1:c.[1364_1365insTG]; XP_008194738.1:c.[1364_1365insTG]","XP_008194737.1:p.[Ser456fs]; XP_008194736.1:p.[Ser456fs]; XP_008194738.1:p.[Ser456fs]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[707,"NC_007421.3","3419974^3419975","Insertion","-","TTG","Heterozygous",12,22,54.55,1,4,9,0.31,38.58,13,28,4,8,null,0.39,0.99,"no","complex","No",1,200,"XP_008194736.1:c.[1364_1365insTTG]; XP_008194738.1:c.[1364_1365insTTG]; XP_008194737.1:c.[1364_1365insTTG]","XP_008194736.1:p.[Ile455_Ser456insCys]; XP_008194738.1:p.[Ile455_Ser456insCys]; XP_008194737.1:p.[Ile455_Ser456insCys]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[708,"NC_007421.3",3420010,"SNV","A","G","Heterozygous",10,28,35.71,1,4,6,0.4,40,10,28,3,5,2.45,0.68,1,"no","A/G","No",1,64.1,"XP_008194736.1:c.[1400A>G]; XP_008194737.1:c.[1400A>G]; XP_008194738.1:c.[1400A>G]","XP_008194736.1:p.[Lys467Arg]; XP_008194737.1:p.[Lys467Arg]; XP_008194738.1:p.[Lys467Arg]","LOC100142308",100142308,null,"100142308 [Gene Symbol: LOC100142308] [Locus Tag: TcasGA2_TC015609] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100142308] [Gene Type: protein-coding]","TcasGA2_TC015609; LOC100142308"]
[709,"NC_007421.3",3440551,"SNV","C","A","Homozygous",23,23,100,1,2,21,0.09,38.91,23,23,8,8,null,1,1,"no","A/A","No",1,91.51,"XP_015836350.1:c.[8579C>A]; XP_008194761.1:c.[8579C>A]; XP_015836349.1:c.[8579C>A]","XP_015836350.1:p.[Thr2860Lys]; XP_008194761.1:p.[Thr2860Lys]; XP_015836349.1:p.[Thr2860Lys]","LOC103313398",103313398,null,"103313398 [Gene Symbol: LOC103313398] [Locus Tag: TcasGA2_TC015610] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC103313398] [Gene Type: protein-coding]","LOC103313398; TcasGA2_TC015610"]
[712,"NC_007421.3",3464571,"SNV","C","T","Homozygous",21,21,100,1,8,20,0.29,36.24,28,28,7,12,null,1,1,"no","T/T","No",1,85.53,"XP_969916.1:c.1934C>T","XP_969916.1:p.Thr645Met","LOC658435",658435,null,"658435 [Gene Symbol: LOC658435] [Locus Tag: TcasGA2_TC015614] [Chromosome: LG6] [Map Location: ] [Description: cytosolic 10-formyltetrahydrofolate dehydrogenase] [Gene Type: protein-coding]","TcasGA2_TC015614; LOC658435"]
[713,"NC_007421.3",3476314,"SNV","T","C","Homozygous",21,21,100,1,11,15,0.42,36.1,26,26,7,10,null,1,1,"no","C/C","No",1,83.88,"XP_001808976.1:c.142A>G","XP_001808976.1:p.Ile48Val","LOC100141756",100141756,null,"100141756 [Gene Symbol: LOC100141756] [Locus Tag: TcasGA2_TC015091] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100141756] [Gene Type: protein-coding]","LOC100141756; TcasGA2_TC015091"]
[714,"NC_007421.3",3596692,"SNV","T","C","Homozygous",22,22,100,1,16,14,0.47,35.95,30,30,8,13,null,1,1,"no","C/C","No",1,86.9,"XP_015836278.1:c.2956A>G","XP_015836278.1:p.Thr986Ala","LOC100142375",100142375,null,"100142375 [Gene Symbol: LOC100142375] [Locus Tag: TcasGA2_TC015081] [Chromosome: LG6] [Map Location: ] [Description: serine/threonine-protein kinase SIK3] [Gene Type: protein-coding]","LOC100142375; TcasGA2_TC015081"]
[715,"NC_007421.3",3596720,"SNV","C","G","Heterozygous",14,32,43.75,1,10,4,0.29,39.79,14,34,2,10,2.83,0.46,0.93,"no","C/G","No",1,102.92,"XP_015836278.1:c.2928G>C","XP_015836278.1:p.Glu976Asp","LOC100142375",100142375,null,"100142375 [Gene Symbol: LOC100142375] [Locus Tag: TcasGA2_TC015081] [Chromosome: LG6] [Map Location: ] [Description: serine/threonine-protein kinase SIK3] [Gene Type: protein-coding]","LOC100142375; TcasGA2_TC015081"]
[717,"NC_007421.3",3721324,"SNV","C","G","Homozygous",22,22,100,1,11,13,0.46,37.73,24,24,7,13,null,1,1,"no","G/G","No",1,86.9,"XP_008194798.1:c.[255G>C]; XP_001811460.1:c.[351G>C]","XP_008194798.1:p.[Arg85Ser]; XP_001811460.1:p.[Arg117Ser]","LOC660363, LOC100142445","660363 , 100142445",null,"660363 [Gene Symbol: LOC660363] [Locus Tag: TcasGA2_TC015073] [Chromosome: LG6] [Map Location: ] [Description: zinc finger Y-chromosomal protein 1] [Gene Type: protein-coding] || 100142445 [Gene Symbol: LOC100142445] [Locus Tag: TcasGA2_TC015076] [Chromosome: LG6] [Map Location: ] [Description: swi5-dependent recombination DNA repair protein 1 homolog] [Gene Type: protein-coding]","LOC660363; TcasGA2_TC015073 || TcasGA2_TC015076; LOC100142445"]
[719,"NC_007421.3",3751660,"SNV","G","T","Heterozygous",11,26,42.31,1,2,10,0.17,38.64,12,28,5,5,0.21,0.75,0.74,"no","G/T","No",1,76.07,"XP_008194802.1:c.[578C>A]; XP_015836437.1:c.[578C>A]","XP_008194802.1:p.[Thr193Asn]; XP_015836437.1:p.[Thr193Asn]","LOC103313408",103313408,null,"103313408 [Gene Symbol: LOC103313408] [Locus Tag: TcasGA2_TC015072] [Chromosome: LG6] [Map Location: ] [Description: zinc finger Y-chromosomal protein] [Gene Type: protein-coding]","TcasGA2_TC015072; LOC103313408"]
[720,"NC_007421.3",3860294,"SNV","G","C","Heterozygous",8,21,38.1,1,7,4,0.36,39.5,11,24,2,6,0.98,0.22,0.98,"no","C/G","No",1,57.16,"XP_001812043.1:c.536G>C","XP_001812043.1:p.Gly179Ala","LOC100142307",100142307,null,"100142307 [Gene Symbol: LOC100142307] [Locus Tag: TcasGA2_TC015640] [Chromosome: LG6] [Map Location: ] [Description: MAM and LDL-receptor class A domain-containing protein 1] [Gene Type: protein-coding]","LOC100142307; TcasGA2_TC015640"]
[721,"NC_007421.3",3861019,"SNV","G","T","Heterozygous",9,22,40.91,1,0,9,0,36.78,9,22,6,4,-1,0.31,0.47,"no","G/T","No",1,61.72,"XP_001812043.1:c.1164G>T","XP_001812043.1:p.Glu388Asp","LOC100142307",100142307,null,"100142307 [Gene Symbol: LOC100142307] [Locus Tag: TcasGA2_TC015640] [Chromosome: LG6] [Map Location: ] [Description: MAM and LDL-receptor class A domain-containing protein 1] [Gene Type: protein-coding]","LOC100142307; TcasGA2_TC015640"]
[722,"NC_007421.3",4230792,"SNV","A","G","Homozygous",20,20,100,1,14,8,0.36,38.55,22,22,9,10,null,1,1,"no","G/G","No",1,80.88,"XP_973569.2:c.1583T>C","XP_973569.2:p.Ile528Thr","LOC662377",662377,null,"662377 [Gene Symbol: LOC662377] [Locus Tag: TcasGA2_TC015049] [Chromosome: LG6] [Map Location: ] [Description: probable ATP-dependent RNA helicase DHX34] [Gene Type: protein-coding]","LOC662377; TcasGA2_TC015049"]
[724,"NC_007421.3",4364360,"SNV","G","A","Heterozygous",13,21,61.9,1,7,6,0.46,36.69,13,21,5,9,-2.82,0.57,0.74,"no","A/G","No",1,58.08,"XP_001813701.2:c.550G>A","XP_001813701.2:p.Ala184Thr","LOC100141549",100141549,null,"100141549 [Gene Symbol: LOC100141549] [Locus Tag: TcasGA2_TC015661] [Chromosome: LG6] [Map Location: ] [Description: E3 ubiquitin-protein ligase FANCL] [Gene Type: protein-coding]","TcasGA2_TC015661; LOC100141549"]
[726,"NC_007421.3",4388460,"SNV","G","C","Homozygous",21,21,100,1,7,19,0.27,35.24,26,26,7,9,null,1,1,"no","C/C","No",1,83.88,"XP_974280.1:c.[859C>G]; XP_015836416.1:c.[859C>G]","XP_974280.1:p.[Gln287Glu]; XP_015836416.1:p.[Gln287Glu]","LOC663127",663127,null,"663127 [Gene Symbol: LOC663127] [Locus Tag: TcasGA2_TC015030] [Chromosome: LG6] [Map Location: ] [Description: cytochrome P450 307B1] [Gene Type: protein-coding]","CYP307B1; LOC663127; TcasGA2_TC015030"]
[727,"NC_007421.3",4388773,"SNV","G","C","Heterozygous",8,20,40,1,5,3,0.38,35.12,8,22,4,6,-1.5,0.24,0.83,"no","C/G","No",1,59.96,"XP_974280.1:c.[546C>G]; XP_015836416.1:c.[546C>G]","XP_974280.1:p.[His182Gln]; XP_015836416.1:p.[His182Gln]","LOC663127",663127,null,"663127 [Gene Symbol: LOC663127] [Locus Tag: TcasGA2_TC015030] [Chromosome: LG6] [Map Location: ] [Description: cytochrome P450 307B1] [Gene Type: protein-coding]","CYP307B1; LOC663127; TcasGA2_TC015030"]
[728,"NC_007421.3",4424263,"SNV","T","G","Heterozygous",8,21,38.1,1,2,6,0.25,37.5,8,26,5,5,1.81,0.58,0.89,"no","G/T","No",1,59.52,"XP_015836415.1:c.4870A>C","XP_015836415.1:p.Ile1624Leu","LOC663181",663181,null,"663181 [Gene Symbol: LOC663181] [Locus Tag: TcasGA2_TC030467] [Chromosome: LG6] [Map Location: ] [Description: apolipophorins] [Gene Type: protein-coding]","LOC663181; ApoLI-II; TcasGA2_TC030467"]
[730,"NC_007421.3","4470277..4470278","MNV","AA","CG","Homozygous",22,22,100,1,12,16,0.43,37.53,28,28,10,21,null,1,1,"no","CG/CG","No",1,200,"XP_008194853.1:c.[740_741delTTinsCG]; XP_008194854.1:c.[740_741delTTinsCG]; XP_008194852.1:c.[938_939delTTinsCG]","XP_008194853.1:p.[Val247Ala]; XP_008194854.1:p.[Val247Ala]; XP_008194852.1:p.[Val313Ala]","LOC100142506",100142506,null,"100142506 [Gene Symbol: LOC100142506] [Locus Tag: TcasGA2_TC015028] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC100142506; TcasGA2_TC015028"]
[732,"NC_007421.3",4901054,"SNV","A","G","Heterozygous",8,21,38.1,1,3,5,0.38,40.5,8,22,2,6,0.58,0.27,0.83,"no","A/G","No",1,58.08,"XP_015836485.1:c.4177A>G","XP_015836485.1:p.Met1393Val","LOC657732",657732,null,"657732 [Gene Symbol: LOC657732] [Locus Tag: TcasGA2_TC014999] [Chromosome: LG6] [Map Location: ] [Description: citron Rho-interacting kinase] [Gene Type: protein-coding]","TcasGA2_TC014999; LOC657732"]
[733,"NC_007421.3",4928518,"SNV","T","G","Heterozygous",13,21,61.9,1,2,11,0.15,37.31,13,22,4,3,-2.75,0.46,0.3,"no","G/T","No",1,51.72,"XP_008194886.1:c.[14A>C]; XP_015836488.1:c.[14A>C]","XP_008194886.1:p.[Asn5Thr]; XP_015836488.1:p.[Asn5Thr]","LOC657420",657420,null,"657420 [Gene Symbol: LOC657420] [Locus Tag: TcasGA2_TC015686] [Chromosome: LG6] [Map Location: ] [Description: small G protein signaling modulator 1] [Gene Type: protein-coding]","SGSM1; LOC657420; TcasGA2_TC015686"]
[734,"NC_007421.3",4984730,"SNV","A","G","Heterozygous",16,25,64,1,11,10,0.48,38.44,21,30,5,10,-0.74,0.71,0.96,"no","A/G","No",1,58.09,"XP_015836481.1:c.[311A>G]; XP_015836480.1:c.[311A>G]","XP_015836481.1:p.[Lys104Arg]; XP_015836480.1:p.[Lys104Arg]","LOC657193, LOC107398090","657193 , 107398090",null,"657193 [Gene Symbol: LOC657193] [Locus Tag: TcasGA2_TC015684] [Chromosome: LG6] [Map Location: ] [Description: bicaudal D-related protein homolog] [Gene Type: protein-coding] || 107398090 [Gene Symbol: LOC107398090] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 63] [Gene Type: protein-coding]","LOC657193; TcasGA2_TC015684 || LOC107398090"]
[735,"NC_007421.3",5092148,"SNV","A","T","Homozygous",25,25,100,1,10,17,0.37,36.84,27,27,10,14,null,1,1,"no","T/T","No",1,97.57,"XP_015836498.1:c.[508T>A]; XP_015836493.1:c.[712T>A]; XP_015836491.1:c.[712T>A]; XP_015836496.1:c.[592T>A]; XP_015836497.1:c.[592T>A]; XP_015836492.1:c.[712T>A]; XP_015836495.1:c.[595T>A]; XP_015836494.1:c.[712T>A]","XP_015836498.1:p.[Tyr170Asn]; XP_015836493.1:p.[Tyr238Asn]; XP_015836491.1:p.[Tyr238Asn]; XP_015836496.1:p.[Tyr198Asn]; XP_015836497.1:p.[Tyr198Asn]; XP_015836492.1:p.[Tyr238Asn]; XP_015836495.1:p.[Tyr199Asn]; XP_015836494.1:p.[Tyr238Asn]","LOC655777",655777,null,"655777 [Gene Symbol: LOC655777] [Locus Tag: TcasGA2_TC015678] [Chromosome: LG6] [Map Location: ] [Description: cyclic nucleotide-gated cation channel beta-1] [Gene Type: protein-coding]","LOC655777; TcasGA2_TC015678"]
[737,"NC_007421.3","5189881..5189882","MNV","CC","AA","Heterozygous",15,22,68.18,1,2,13,0.13,38.36,15,22,4,9,0.84,0.35,0.97,"no","complex","No",1,200,"XP_008194864.1:c.685_686delCCinsAA","XP_008194864.1:p.Pro229Asn","LOC655209",655209,null,"655209 [Gene Symbol: LOC655209] [Locus Tag: TcasGA2_TC015021] [Chromosome: LG6] [Map Location: ] [Description: golgin subfamily A member 4] [Gene Type: protein-coding]","LOC655209; TcasGA2_TC015021"]
[738,"NC_007421.3",5251470,"SNV","A","C","Heterozygous",10,22,45.45,1,2,8,0.2,39.6,10,29,6,5,0.49,0.88,0.82,"no","A/C","No",1,82.56,"XP_015836472.1:c.[3251A>C]; XP_015836471.1:c.[3491A>C]; XP_015836473.1:c.[2960A>C]","XP_015836472.1:p.[Tyr1084Ser]; XP_015836471.1:p.[Tyr1164Ser]; XP_015836473.1:p.[Tyr987Ser]","LOC654936",654936,null,"654936 [Gene Symbol: LOC654936] [Locus Tag: TcasGA2_TC015023] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 136] [Gene Type: protein-coding]","TcasGA2_TC015023; LOC654936"]
[739,"NC_007421.3",5251488,"SNV","C","T","Heterozygous",11,22,50,1,7,10,0.41,40.09,17,28,8,7,0.89,0.93,0.99,"no","C/T","No",1,89.66,"XP_015836472.1:c.[3269C>T]; XP_015836473.1:c.[2978C>T]; XP_015836471.1:c.[3509C>T]","XP_015836472.1:p.[Ser1090Leu]; XP_015836473.1:p.[Ser993Leu]; XP_015836471.1:p.[Ser1170Leu]","LOC654936",654936,null,"654936 [Gene Symbol: LOC654936] [Locus Tag: TcasGA2_TC015023] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 136] [Gene Type: protein-coding]","TcasGA2_TC015023; LOC654936"]
[740,"NC_007421.3","5251499..5251501","MNV","AGC","CAT","Heterozygous",11,23,47.83,1,2,9,0.18,38.56,11,26,8,6,0.28,0.42,0.96,"no","complex","No",1,200,"XP_015836472.1:c.[3280_3282delAGCinsCAT]; XP_015836471.1:c.[3520_3522delAGCinsCAT]; XP_015836473.1:c.[2989_2991delAGCinsCAT]","XP_015836472.1:p.[Ser1094His]; XP_015836471.1:p.[Ser1174His]; XP_015836473.1:p.[Ser997His]","LOC654936",654936,null,"654936 [Gene Symbol: LOC654936] [Locus Tag: TcasGA2_TC015023] [Chromosome: LG6] [Map Location: ] [Description: coiled-coil domain-containing protein 136] [Gene Type: protein-coding]","TcasGA2_TC015023; LOC654936"]
[741,"NC_007421.3",5483309,"SNV","A","G","Homozygous",21,22,95.45,1,0,21,0,37.67,21,22,3,5,null,1,1,"no","G/G","No",1,56.42,"XP_008191954.1:c.[1040T>C]; XP_008191952.1:c.[1109T>C]; XP_008191953.1:c.[1109T>C]; XP_015836564.1:c.[1040T>C]","XP_008191954.1:p.[Val347Ala]; XP_008191952.1:p.[Val370Ala]; XP_008191953.1:p.[Val370Ala]; XP_015836564.1:p.[Val347Ala]","LOC659527",659527,null,"659527 [Gene Symbol: LOC659527] [Locus Tag: TcasGA2_TC030641] [Chromosome: LG6] [Map Location: ] [Description: actin cytoskeleton-regulatory complex protein PAN1] [Gene Type: protein-coding]","TcasGA2_TC030641; LOC659527"]
[748,"NC_007421.3",5793484,"SNV","T","C","Homozygous",21,21,100,1,12,18,0.4,37.38,30,30,11,10,null,1,1,"no","C/C","No",1,83.89,"XP_015836553.1:c.[533A>G]; XP_015836554.1:c.[428A>G]; XP_001812453.2:c.[428A>G]","XP_015836553.1:p.[Tyr178Cys]; XP_015836554.1:p.[Tyr143Cys]; XP_001812453.2:p.[Tyr143Cys]","LOC100141600",100141600,null,"100141600 [Gene Symbol: LOC100141600] [Locus Tag: TcasGA2_TC014967] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100141600] [Gene Type: protein-coding]","TcasGA2_TC014967; LOC100141600"]
[749,"NC_007421.3",5793490,"SNV","G","A","Homozygous",23,23,100,1,9,20,0.31,39.78,29,29,12,11,null,1,1,"no","A/A","No",1,91.51,"XP_015836553.1:c.[527C>T]; XP_015836554.1:c.[422C>T]; XP_001812453.2:c.[422C>T]","XP_015836553.1:p.[Thr176Ile]; XP_015836554.1:p.[Thr141Ile]; XP_001812453.2:p.[Thr141Ile]","LOC100141600",100141600,null,"100141600 [Gene Symbol: LOC100141600] [Locus Tag: TcasGA2_TC014967] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC100141600] [Gene Type: protein-coding]","TcasGA2_TC014967; LOC100141600"]
[750,"NC_007421.3",5814716,"SNV","C","G","Homozygous",27,27,100,1,21,17,0.45,36.44,38,38,11,17,null,1,1,"no","G/G","No",1,101.94,"XP_008191976.1:c.2279C>G","XP_008191976.1:p.Ala760Gly","LOC103312130",103312130,null,"103312130 [Gene Symbol: LOC103312130] [Locus Tag: TcasGA2_TC015731] [Chromosome: LG6] [Map Location: ] [Description: probable ATP-dependent RNA helicase kurz] [Gene Type: protein-coding]","TcasGA2_TC015731; LOC103312130"]
[752,"NC_007421.3",5823557,"SNV","A","G","Homozygous",21,21,100,1,8,21,0.28,38.14,29,29,10,12,null,1,1,"no","G/G","No",1,83.89,"XP_973267.1:c.760A>G","XP_973267.1:p.Ser254Gly","LOC662051",662051,null,"662051 [Gene Symbol: LOC662051] [Locus Tag: TcasGA2_TC015732] [Chromosome: LG6] [Map Location: ] [Description: thioredoxin-related transmembrane protein 2 homolog] [Gene Type: protein-coding]","TcasGA2_TC015732; LOC662051"]
[753,"NC_007421.3",7441919,"SNV","A","G","Homozygous",21,21,100,1,16,11,0.41,36.14,27,27,9,15,null,1,1,"no","G/G","No",1,83.88,"XP_008194927.2:c.[401A>G]; XP_015836527.1:c.[155A>G]; XP_015836525.1:c.[155A>G]; XP_015836526.1:c.[155A>G]","XP_008194927.2:p.[Asp134Gly]; XP_015836527.1:p.[Asp52Gly]; XP_015836525.1:p.[Asp52Gly]; XP_015836526.1:p.[Asp52Gly]","LOC656109",656109,null,"656109 [Gene Symbol: LOC656109] [Locus Tag: TcasGA2_TC015753] [Chromosome: LG6] [Map Location: ] [Description: putative fatty acyl-CoA reductase CG5065] [Gene Type: protein-coding]","TcasGA2_TC015753; LOC656109"]
[754,"NC_007421.3",7486457,"SNV","A","G","Homozygous",20,20,100,1,20,0,0,38.9,20,20,7,12,null,1,1,"no","G/G","No",1,80.88,"XP_015836505.1:c.4784T>C","XP_015836505.1:p.Phe1595Ser","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[755,"NC_007421.3",7488946,"SNV","G","A","Homozygous",26,26,100,1,8,18,0.31,36.46,26,26,9,18,null,1,1,"no","A/A","No",1,100.54,"XP_015836505.1:c.2390C>T","XP_015836505.1:p.Thr797Ile","LOC656772",656772,null,"656772 [Gene Symbol: LOC656772] [Locus Tag: TcasGA2_TC014948] [Chromosome: LG6] [Map Location: ] [Description: arginine-glutamic acid dipeptide repeats protein] [Gene Type: protein-coding]","LOC656772; TcasGA2_TC014948"]
[756,"NC_007421.3",7501715,"SNV","A","T","Homozygous",21,21,100,1,3,20,0.13,37.29,23,23,7,12,null,1,1,"no","T/T","No",1,85.53,"XP_008194930.1:c.[643T>A]; XP_008194931.1:c.[2207+557A>T]","XP_008194930.1:p.Leu215Ile","LOC656861, LOC103313438","656861 , 103313438",null,"656861 [Gene Symbol: LOC656861] [Locus Tag: TcasGA2_TC015758] [Chromosome: LG6] [Map Location: ] [Description: syndetin] [Gene Type: protein-coding] || 103313438 [Gene Symbol: LOC103313438] [Locus Tag: TcasGA2_TC014947] [Chromosome: LG6] [Map Location: ] [Description: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6] [Gene Type: protein-coding]","TcasGA2_TC015758; LOC656861 || LOC103313438; TcasGA2_TC014947"]
[757,"NC_007421.3",7581106,"SNV","C","A","Homozygous",27,27,100,1,17,10,0.37,37.81,27,27,8,11,null,1,1,"no","A/A","No",1,103.55,"XP_008194915.1:c.2278G>T","XP_008194915.1:p.Ala760Ser","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[758,"NC_007421.3",7582594,"SNV","T","C","Homozygous",20,20,100,1,14,12,0.46,35.25,26,26,9,9,null,1,1,"no","C/C","No",1,80.88,"XP_008194915.1:c.790A>G","XP_008194915.1:p.Ile264Val","LOC103313436",103313436,null,"103313436 [Gene Symbol: LOC103313436] [Locus Tag: TcasGA2_TC014944] [Chromosome: LG6] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313436; TcasGA2_TC014944"]
[759,"NC_007421.3",7586066,"SNV","A","G","Homozygous",35,35,100,1,17,18,0.49,37.94,35,35,9,18,null,1,1,"no","G/G","No",1,126.03,"XP_008194916.1:c.[2474A>G]; XP_015836513.1:c.[2477A>G]","XP_008194916.1:p.[Lys825Arg]; XP_015836513.1:p.[Lys826Arg]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[760,"NC_007421.3","7587310^7587311","Insertion","-","AGG","Homozygous",20,20,100,1,10,11,0.48,37.93,21,21,8,14,null,1,1,"no","AGG/AGG","No",1,200,"XP_008194916.1:c.[3718_3719insAGG]; XP_015836513.1:c.[3721_3722insAGG]","XP_008194916.1:p.[Glu1241_Pro1242insGlu]; XP_015836513.1:p.[Glu1242_Pro1243insGlu]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[762,"NC_007421.3",7591262,"SNV","C","T","Heterozygous",14,28,50,1,6,8,0.43,38,14,32,6,7,1.19,0.68,0.64,"no","C/T","No",1,111.18,"XP_008194916.1:c.[4664C>T]; XP_015836513.1:c.[4667C>T]","XP_008194916.1:p.[Ser1555Leu]; XP_015836513.1:p.[Ser1556Leu]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[763,"NC_007421.3",7591296,"SNV","G","C","Homozygous",27,27,100,1,15,14,0.48,38.59,29,29,13,16,null,1,1,"no","C/C","No",1,101.95,"XP_008194916.1:c.[4698G>C]; XP_015836513.1:c.[4701G>C]","XP_008194916.1:p.[Glu1566Asp]; XP_015836513.1:p.[Glu1567Asp]","LOC657194",657194,null,"657194 [Gene Symbol: LOC657194] [Locus Tag: TcasGA2_TC015760] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC657194] [Gene Type: protein-coding]","LOC657194; TcasGA2_TC015760"]
[764,"NC_007421.3",7894014,"SNV","T","C","Homozygous",28,28,100,1,16,18,0.47,38,34,34,11,17,null,1,1,"no","C/C","No",1,104.95,"XP_008194945.1:c.[2891A>G]; XP_008194946.1:c.[2927A>G]; XP_008194944.1:c.[2927A>G]; XP_969785.1:c.[2873A>G]","XP_008194945.1:p.[His964Arg]; XP_008194946.1:p.[His976Arg]; XP_008194944.1:p.[His976Arg]; XP_969785.1:p.[His958Arg]","LOC658290",658290,null,"658290 [Gene Symbol: LOC658290] [Locus Tag: TcasGA2_TC014935] [Chromosome: LG6] [Map Location: ] [Description: phosphatidylinositol 4-kinase alpha] [Gene Type: protein-coding]","LOC658290; TcasGA2_TC014935"]
[765,"NC_007421.3","8031936^8031937","Insertion","-","T","Heterozygous",13,36,36.11,1,11,4,0.27,38.15,15,44,5,10,0.18,0.34,0.71,"no","-/T","No",1,81.06,"XP_015836506.1:c.431_432insA","XP_015836506.1:p.Asp145fs","LOC107398093",107398093,null,"107398093 [Gene Symbol: LOC107398093] [Locus Tag: TcasGA2_TC033445] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398093] [Gene Type: protein-coding]","TcasGA2_TC033445; LOC107398093"]
[766,"NC_007421.3",8032007,"SNV","G","A","Heterozygous",17,31,54.84,1,7,14,0.33,35.41,21,36,7,11,-1.47,0.48,1,"no","A/G","No",1,106.78,"XP_015836506.1:c.361C>T","XP_015836506.1:p.Pro121Ser","LOC107398093",107398093,null,"107398093 [Gene Symbol: LOC107398093] [Locus Tag: TcasGA2_TC033445] [Chromosome: LG6] [Map Location: ] [Description: uncharacterized LOC107398093] [Gene Type: protein-coding]","TcasGA2_TC033445; LOC107398093"]
[769,"NC_007421.3",8929325,"SNV","A","G","Homozygous",22,22,100,1,18,7,0.28,35.05,25,25,8,14,null,1,1,"no","G/G","No",1,83.89,"XP_008195008.1:c.[2768A>G]; XP_008195010.1:c.[2588A>G]; XP_008195006.1:c.[2870A>G]; XP_008195007.1:c.[2792A>G]; XP_968455.2:c.[2798A>G]; XP_008195005.1:c.[2921A>G]","XP_008195008.1:p.[Lys923Arg]; XP_008195010.1:p.[Lys863Arg]; XP_008195006.1:p.[Lys957Arg]; XP_008195007.1:p.[Lys931Arg]; XP_968455.2:p.[Lys933Arg]; XP_008195005.1:p.[Lys974Arg]","LOC656862",656862,null,"656862 [Gene Symbol: LOC656862] [Locus Tag: TcasGA2_TC015817] [Chromosome: LG6] [Map Location: ] [Description: copper-transporting ATPase 1] [Gene Type: protein-coding]","TcasGA2_TC015817; LOC656862"]
[770,"NC_007421.3",9008638,"SNV","C","A","Homozygous",24,24,100,1,12,12,0.5,38.33,24,24,8,14,null,1,1,"no","A/A","No",1,94.52,"XP_969339.3:c.642C>A","XP_969339.3:p.Asp214Glu","LOC657811",657811,null,"657811 [Gene Symbol: LOC657811] [Locus Tag: TcasGA2_TC015826] [Chromosome: LG6] [Map Location: ] [Description: histone-lysine N-methyltransferase SETD1B] [Gene Type: protein-coding]","TcasGA2_TC015826; LOC657811"]
[771,"NC_007421.3",9021834,"SNV","G","A","Homozygous",22,22,100,1,13,17,0.43,36.36,30,30,7,13,null,1,1,"no","A/A","No",1,88.51,"XP_969485.1:c.319G>A","XP_969485.1:p.Val107Ile","LOC657973",657973,null,"657973 [Gene Symbol: LOC657973] [Locus Tag: TcasGA2_TC015827] [Chromosome: LG6] [Map Location: ] [Description: WASH complex subunit FAM21A] [Gene Type: protein-coding]","LOC657973; TcasGA2_TC015827"]
[772,"NC_007421.3",9024384,"SNV","A","G","Homozygous",22,22,100,1,6,17,0.26,39.23,23,23,7,10,null,1,1,"no","G/G","No",1,86.9,"XP_969485.1:c.2533A>G","XP_969485.1:p.Lys845Glu","LOC657973",657973,null,"657973 [Gene Symbol: LOC657973] [Locus Tag: TcasGA2_TC015827] [Chromosome: LG6] [Map Location: ] [Description: WASH complex subunit FAM21A] [Gene Type: protein-coding]","LOC657973; TcasGA2_TC015827"]
[773,"NC_007421.3",9163373,"SNV","G","C","Homozygous",20,20,100,1,13,16,0.45,37.55,29,29,9,10,null,1,1,"no","C/C","No",1,80.88,"XP_008194975.1:c.440G>C","XP_008194975.1:p.Gly147Ala","LOC100142233",100142233,null,"100142233 [Gene Symbol: LOC100142233] [Locus Tag: TcasGA2_TC015835] [Chromosome: LG6] [Map Location: ] [Description: dynein assembly factor 1, axonemal] [Gene Type: protein-coding]","LOC100142233; TcasGA2_TC015835"]
[774,"NC_007421.3",9222165,"SNV","A","C","Homozygous",20,20,100,1,15,6,0.29,37.3,21,21,11,14,null,1,1,"no","C/C","No",1,80.88,"XP_008195034.1:c.546A>C","XP_008195034.1:p.Lys182Asn","LOC659101, LOC103313474","659101 , 103313474",null,"659101 [Gene Symbol: LOC659101] [Locus Tag: TcasGA2_TC014880] [Chromosome: LG6] [Map Location: ] [Description: multidrug resistance-associated protein 4] [Gene Type: protein-coding] || 103313474 [Gene Symbol: LOC103313474] [Locus Tag: TcasGA2_TC033464] [Chromosome: LG6] [Map Location: ] [Description: protein takeout-like] [Gene Type: protein-coding]","LOC659101; TcasGA2_TC014880 || LOC103313474; TcasGA2_TC033464"]
[775,"NC_007421.3",9400595,"SNV","A","T","Homozygous",32,32,100,1,20,18,0.47,38.16,38,38,10,19,null,1,1,"no","T/T","No",1,118.62,"XP_015836623.1:c.[601T>A]; XP_015836619.1:c.[688T>A]; XP_008195042.1:c.[688T>A]; XP_015836621.1:c.[688T>A]; XP_015836622.1:c.[688T>A]; XP_015836626.1:c.[688T>A]; XP_015836625.1:c.[688T>A]; XP_015836624.1:c.[688T>A]; XP_015836620.1:c.[688T>A]","XP_015836623.1:p.[Ser201Thr]; XP_015836619.1:p.[Ser230Thr]; XP_008195042.1:p.[Ser230Thr]; XP_015836621.1:p.[Ser230Thr]; XP_015836622.1:p.[Ser230Thr]; XP_015836626.1:p.[Ser230Thr]; XP_015836625.1:p.[Ser230Thr]; XP_015836624.1:p.[Ser230Thr]; XP_015836620.1:p.[Ser230Thr]","LOC660242",660242,null,"660242 [Gene Symbol: LOC660242] [Locus Tag: TcasGA2_TC014869] [Chromosome: LG6] [Map Location: ] [Description: RIMS-binding protein 2] [Gene Type: protein-coding]","LOC660242; TcasGA2_TC014869"]
[776,"NC_007421.3",9708895,"SNV","G","A","Heterozygous",15,24,62.5,1,6,11,0.35,38.87,17,27,8,9,1.85,0.84,0.92,"no","A/G","No",1,62.52,"XP_008195056.1:c.[3125G>A]; XP_008195057.1:c.[3125G>A]","XP_008195056.1:p.[Ser1042Asn]; XP_008195057.1:p.[Ser1042Asn]","LOC661331",661331,null,"661331 [Gene Symbol: LOC661331] [Locus Tag: TcasGA2_TC015859] [Chromosome: LG6] [Map Location: ] [Description: ATP-binding cassette sub-family A member 5] [Gene Type: protein-coding]","LOC661331; TcasGA2_TC015859"]
[778,"NC_007421.3","9876570..9876571","MNV","GT","TC","Heterozygous",6,21,28.57,1,5,1,0.17,38.67,6,21,3,6,0.25,0.42,0.73,"no","complex","No",1,200,"XP_015836605.1:c.182_183delACinsGA","XP_015836605.1:p.Asp61Gly","LOC107398117",107398117,null,"107398117 [Gene Symbol: LOC107398117] [Locus Tag: ] [Chromosome: LG6] [Map Location: ] [Description: putative glycine-rich cell wall structural protein 1] [Gene Type: protein-coding]","LOC107398117"]
[782,"NC_007422.5",604142,"SNV","T","C","Homozygous",27,27,100,1,14,21,0.4,36.78,35,35,10,15,null,1,1,"no","C/C","No",1,101.94,"XP_973505.1:c.748A>G","XP_973505.1:p.Met250Val","LOC662306",662306,null,"662306 [Gene Symbol: LOC662306] [Locus Tag: TcasGA2_TC009472] [Chromosome: LG7] [Map Location: ] [Description: tRNA (cytosine(34)-C(5))-methyltransferase] [Gene Type: protein-coding]","LOC662306; TcasGA2_TC009472"]
[783,"NC_007422.5",1133134,"SNV","G","A","Homozygous",25,25,100,1,20,8,0.29,37.92,28,28,10,16,null,1,1,"no","A/A","No",1,97.53,"XP_008195127.1:c.[436G>A]; XP_015836709.1:c.[436G>A]; XP_008195128.1:c.[879+1306C>T]","XP_008195127.1:p.[Val146Met]; XP_015836709.1:p.[Val146Met]","LOC659993, LOC103313496","659993 , 103313496",null,"659993 [Gene Symbol: LOC659993] [Locus Tag: TcasGA2_TC033519] [Chromosome: LG7] [Map Location: ] [Description: intron-binding protein aquarius] [Gene Type: protein-coding] || 103313496 [Gene Symbol: LOC103313496] [Locus Tag: TcasGA2_TC009370] [Chromosome: LG7] [Map Location: ] [Description: probable G-protein coupled receptor Mth-like 5] [Gene Type: protein-coding]","LOC659993; AQR; TcasGA2_TC033519 || TcasGA2_TC009370; LOC103313496"]
[784,"NC_007422.5",1195776,"SNV","C","G","Homozygous",25,25,100,1,19,6,0.24,39.32,25,25,8,13,null,1,1,"no","G/G","No",1,95.92,"XP_970529.1:c.820G>C","XP_970529.1:p.Ala274Pro","LOC659104",659104,null,"659104 [Gene Symbol: LOC659104] [Locus Tag: TcasGA2_TC009440] [Chromosome: LG7] [Map Location: ] [Description: vanin-like protein 2] [Gene Type: protein-coding]","TcasGA2_TC009440; LOC659104"]
[785,"NC_007422.5",1195782,"SNV","T","C","Homozygous",23,23,100,1,19,4,0.17,38.7,23,23,7,12,null,1,1,"no","C/C","No",1,89.91,"XP_970529.1:c.814A>G","XP_970529.1:p.Ile272Val","LOC659104",659104,null,"659104 [Gene Symbol: LOC659104] [Locus Tag: TcasGA2_TC009440] [Chromosome: LG7] [Map Location: ] [Description: vanin-like protein 2] [Gene Type: protein-coding]","TcasGA2_TC009440; LOC659104"]
[786,"NC_007422.5",1300026,"SNV","T","A","Homozygous",20,20,100,1,14,9,0.39,37.65,23,23,9,16,null,1,1,"no","A/A","No",1,82.49,"XP_008195115.1:c.407A>T","XP_008195115.1:p.Tyr136Phe","LOC658513",658513,null,"658513 [Gene Symbol: LOC658513] [Locus Tag: TcasGA2_TC009435] [Chromosome: LG7] [Map Location: ] [Description: transmembrane protein 214-B] [Gene Type: protein-coding]","LOC658513; TcasGA2_TC009435"]
[787,"NC_007422.5",1352271,"SNV","T","C","Homozygous",21,21,100,1,16,13,0.45,38.48,29,29,11,12,null,1,1,"no","C/C","No",1,80.88,"XP_008195104.1:c.1622A>G","XP_008195104.1:p.Asn541Ser","LOC657736",657736,null,"657736 [Gene Symbol: LOC657736] [Locus Tag: TcasGA2_TC033516] [Chromosome: LG7] [Map Location: ] [Description: ATP-binding cassette sub-family A member 2] [Gene Type: protein-coding]","LOC657736; TcasGA2_TC033516"]
[789,"NC_007422.5",1486936,"Deletion","C","-","Homozygous",29,30,96.67,1,29,12,0.29,37.62,41,42,11,14,null,1,1,"no","-/-","No",1,79.08,"XP_008195241.1:c.959delG","XP_008195241.1:p.Arg320fs","LOC103313535",103313535,null,"103313535 [Gene Symbol: LOC103313535] [Locus Tag: TcasGA2_TC030158] [Chromosome: LG7] [Map Location: ] [Description: gustatory receptor 60] [Gene Type: protein-coding]","LOC103313535; TcasGA2_TC030158; TcGr60"]
[790,"NC_007422.5",1486994,"SNV","C","T","Homozygous",28,28,100,1,16,18,0.47,37.79,34,34,13,14,null,1,1,"no","T/T","No",1,106.59,"XP_008195241.1:c.901G>A","XP_008195241.1:p.Val301Ile","LOC103313535",103313535,null,"103313535 [Gene Symbol: LOC103313535] [Locus Tag: TcasGA2_TC030158] [Chromosome: LG7] [Map Location: ] [Description: gustatory receptor 60] [Gene Type: protein-coding]","LOC103313535; TcasGA2_TC030158; TcGr60"]
[791,"NC_007422.5",1501938,"SNV","A","G","Homozygous",21,21,100,1,6,15,0.29,37.29,21,21,8,10,null,1,1,"no","G/G","No",1,83.89,"XP_015836650.1:c.253T>C","XP_015836650.1:p.Phe85Leu","LOC655692",655692,null,"655692 [Gene Symbol: LOC655692] [Locus Tag: TcasGA2_TC009418] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655692] [Gene Type: protein-coding]","LOC655692; TcasGA2_TC009418"]
[792,"NC_007422.5",1501940,"SNV","G","A","Homozygous",21,21,100,1,6,15,0.29,37.1,21,21,8,10,null,1,1,"no","A/A","No",1,85.5,"XP_015836650.1:c.251C>T","XP_015836650.1:p.Ala84Val","LOC655692",655692,null,"655692 [Gene Symbol: LOC655692] [Locus Tag: TcasGA2_TC009418] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC655692] [Gene Type: protein-coding]","LOC655692; TcasGA2_TC009418"]
[793,"NC_007422.5",1789542,"SNV","A","G","Homozygous",24,24,100,1,17,13,0.43,38.17,30,30,4,16,null,1,1,"no","G/G","No",1,92.92,"XP_008195268.1:c.[1898T>C]; XP_008195266.1:c.[1910T>C]","XP_008195268.1:p.[Val633Ala]; XP_008195266.1:p.[Val637Ala]","LOC103313545",103313545,null,"103313545 [Gene Symbol: LOC103313545] [Locus Tag: TcasGA2_TC009296] [Chromosome: LG7] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","TcasGA2_TC009296; LOC103313545"]
[795,"NC_007422.5",1813984,"SNV","C","T","Heterozygous",12,23,52.17,1,9,5,0.36,37.42,14,25,3,8,-0.83,0.79,0.97,"no","C/T","No",1,90.54,"XP_968071.1:c.2822G>A","XP_968071.1:p.Arg941Lys","LOC656445",656445,null,"656445 [Gene Symbol: LOC656445] [Locus Tag: TcasGA2_TC009293] [Chromosome: LG7] [Map Location: ] [Description: nucleolar protein 6] [Gene Type: protein-coding]","LOC656445; TcasGA2_TC009293"]
[796,"NC_007422.5",1813997,"SNV","C","G","Heterozygous",12,22,54.55,1,10,5,0.33,39.33,15,25,4,9,0.99,0.16,0.7,"no","C/G","No",1,79.9,"XP_968071.1:c.2809G>C","XP_968071.1:p.Val937Leu","LOC656445",656445,null,"656445 [Gene Symbol: LOC656445] [Locus Tag: TcasGA2_TC009293] [Chromosome: LG7] [Map Location: ] [Description: nucleolar protein 6] [Gene Type: protein-coding]","LOC656445; TcasGA2_TC009293"]
[797,"NC_007422.5",1927376,"SNV","C","A","Heterozygous",9,21,42.86,1,4,5,0.44,40.33,9,21,3,5,1.46,0.75,0.47,"no","A/C","No",1,64.61,"XP_015836757.1:c.[361C>A]; XP_001808852.2:c.[361C>A]","XP_015836757.1:p.[Arg121Ser]; XP_001808852.2:p.[Arg121Ser]","LOC100142508",100142508,null,"100142508 [Gene Symbol: LOC100142508] [Locus Tag: TcasGA2_TC009525] [Chromosome: LG7] [Map Location: ] [Description: cilia- and flagella-associated protein 53] [Gene Type: protein-coding]","LOC100142508; TcasGA2_TC009525"]
[798,"NC_007422.5",1939220,"SNV","T","G","Homozygous",23,23,100,1,15,14,0.48,35.91,29,29,12,10,null,1,1,"no","G/G","No",1,89.9,"XP_015836654.1:c.3090A>C","XP_015836654.1:p.Lys1030Asn","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[799,"NC_007422.5",1939264,"SNV","T","C","Homozygous",21,21,100,1,9,19,0.32,37.52,28,28,12,10,null,1,1,"no","C/C","No",1,83.89,"XP_015836654.1:c.3046A>G","XP_015836654.1:p.Asn1016Asp","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[803,"NC_007422.5",1941310,"SNV","A","T","Homozygous",23,23,100,1,16,11,0.41,37.83,27,27,7,12,null,1,1,"no","T/T","No",1,91.54,"XP_015836654.1:c.1000T>A","XP_015836654.1:p.Ser334Thr","LOC658216",658216,null,"658216 [Gene Symbol: LOC658216] [Locus Tag: TcasGA2_TC009282] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658216] [Gene Type: protein-coding]","LOC658216; TcasGA2_TC009282"]
[806,"NC_007422.5",2233853,"SNV","T","C","Heterozygous",14,25,56,1,6,14,0.3,38,20,34,5,4,1.2,0.41,1,"no","C/T","No",1,73.69,"XP_008195311.1:c.[2518T>C]; XP_008195309.1:c.[2518T>C]; XP_971641.1:c.[2518T>C]; XP_008195310.1:c.[2518T>C]","XP_008195311.1:p.[Ser840Pro]; XP_008195309.1:p.[Ser840Pro]; XP_971641.1:p.[Ser840Pro]; XP_008195310.1:p.[Ser840Pro]","LOC660305",660305,null,"660305 [Gene Symbol: LOC660305] [Locus Tag: TcasGA2_TC009542] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC660305] [Gene Type: protein-coding]","schnurri; TcasGA2_TC009542; LOC660305; shn"]
[807,"NC_007422.5",2249698,"SNV","A","T","Homozygous",31,31,100,1,10,30,0.25,38.29,40,40,11,15,null,1,1,"no","T/T","No",1,115.61,"XP_008195313.1:c.2452A>T","XP_008195313.1:p.Ile818Phe","LOC660552",660552,null,"660552 [Gene Symbol: LOC660552] [Locus Tag: TcasGA2_TC009544] [Chromosome: LG7] [Map Location: ] [Description: UPF0505 protein C16orf62 homolog] [Gene Type: protein-coding]","TcasGA2_TC009544; LOC660552"]
[809,"NC_007422.5",2296499,"SNV","T","G","Heterozygous",9,24,37.5,1,0,9,0,40.44,9,26,1,2,3.49,0.06,0.24,"no","G/T","No",1,63.94,"XP_008195317.2:c.6301T>G","XP_008195317.2:p.Ser2101Ala","LOC660888",660888,null,"660888 [Gene Symbol: LOC660888] [Locus Tag: TcasGA2_TC009548] [Chromosome: LG7] [Map Location: ] [Description: prolow-density lipoprotein receptor-related protein 1] [Gene Type: protein-coding]","TcasGA2_TC009548; LOC660888"]
[814,"NC_007422.5",2366467,"SNV","G","C","Homozygous",21,21,100,1,18,5,0.22,38.43,23,23,8,13,null,1,1,"no","C/C","No",1,83.89,"XP_972801.1:c.789G>C","XP_972801.1:p.Met263Ile","Fpps, LOC661557","661272 , 661557","farnesyl pyrophosphate synthase","661272 [Gene Symbol: Fpps] [Locus Tag: TcasGA2_TC009256] [Chromosome: LG7] [Map Location: ] [Description: farnesyl pyrophosphate synthase] [Gene Type: protein-coding] || 661557 [Gene Symbol: LOC661557] [Locus Tag: TcasGA2_TC033565] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC661557] [Gene Type: protein-coding]","Fpps; TcasGA2_TC009256 || LOC661557; TcasGA2_TC033565"]
[816,"NC_007422.5",2565645,"SNV","T","A","Homozygous",21,21,100,1,18,7,0.28,35.86,25,25,9,16,null,1,1,"no","A/A","No",1,85.5,"XP_015836994.1:c.[870T>A]; XP_008195334.1:c.[870T>A]","XP_015836994.1:p.[Asp290Glu]; XP_008195334.1:p.[Asp290Glu]","LOC100142374",100142374,null,"100142374 [Gene Symbol: LOC100142374] [Locus Tag: TcasGA2_TC009561] [Chromosome: LG7] [Map Location: ] [Description: component of oligomeric golgi complex 1] [Gene Type: protein-coding]","pebbled; TcasGA2_TC009561; Cog1; LOC100142374; peb"]
[818,"NC_007422.5","2842039..2842040","MNV","AA","TG","Heterozygous",4,20,20,1,0,4,0,36.14,4,21,1,1,null,0.01,0.21,"no","complex","No",1,200,"NP_001161921.1:c.1014_1015delAAinsTG","NP_001161921.1:p.Glu338_Lys339delinsAspGlu","Pmp2-c",662882,"peritrophic matrix protein 2-C","662882 [Gene Symbol: Pmp2-c] [Locus Tag: TcasGA2_TC009580] [Chromosome: LG7] [Map Location: ] [Description: peritrophic matrix protein 2-C] [Gene Type: protein-coding]","TcasGA2_TC009580; Pmp2-c"]
[819,"NC_007422.5",2842040,"SNV","A","G","Heterozygous",16,20,80,1,12,5,0.29,39.35,17,21,8,8,null,0.58,0.86,"no","complex","No",1,200,"NP_001161921.1:c.1015A>G","NP_001161921.1:p.Lys339Glu","Pmp2-c",662882,"peritrophic matrix protein 2-C","662882 [Gene Symbol: Pmp2-c] [Locus Tag: TcasGA2_TC009580] [Chromosome: LG7] [Map Location: ] [Description: peritrophic matrix protein 2-C] [Gene Type: protein-coding]","TcasGA2_TC009580; Pmp2-c"]
[820,"NC_007422.5",2916276,"SNV","T","C","Homozygous",20,20,100,1,10,14,0.42,36.75,24,24,6,11,null,1,1,"no","C/C","No",1,80.88,"XP_008195359.1:c.1142T>C","XP_008195359.1:p.Val381Ala","LOC663130",663130,null,"663130 [Gene Symbol: LOC663130] [Locus Tag: TcasGA2_TC009583] [Chromosome: LG7] [Map Location: ] [Description: diacylglycerol kinase 1] [Gene Type: protein-coding]","TcasGA2_TC009583; LOC663130"]
[821,"NC_007422.5",2974006,"SNV","G","A","Homozygous",20,20,100,1,15,9,0.38,39.15,24,24,10,12,null,1,1,"no","A/A","No",1,82.49,"XP_008196611.1:c.691G>A","XP_008196611.1:p.Gly231Arg","LOC655536",655536,null,"655536 [Gene Symbol: LOC655536] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: oxidative stress-induced growth inhibitor 2-like] [Gene Type: protein-coding]","LOC655536"]
[822,"NC_007422.5",3052758,"SNV","C","T","Heterozygous",8,21,38.1,1,2,6,0.25,38.62,8,23,3,7,0.58,0.16,0.22,"no","C/T","No",1,56.41,"XP_015836877.1:c.791G>A","XP_015836877.1:p.Arg264Lys","LOC107398182",107398182,null,"107398182 [Gene Symbol: LOC107398182] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: eukaryotic translation initiation factor 5B-like] [Gene Type: protein-coding]","LOC107398182"]
[824,"NC_007422.5",3170650,"SNV","C","G","Homozygous",20,20,100,1,17,5,0.23,38.6,22,22,10,11,null,1,1,"no","G/G","No",1,80.88,"XP_015836936.1:c.[112G>C]; XP_008195397.1:c.[112G>C]","XP_015836936.1:p.[Val38Leu]; XP_008195397.1:p.[Val38Leu]","LOC103313578",103313578,null,"103313578 [Gene Symbol: LOC103313578] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: gustatory receptor 68a-like] [Gene Type: protein-coding]","LOC103313578"]
[825,"NC_007422.5",3190243,"SNV","T","G","Homozygous",20,20,100,1,11,11,0.5,37.55,22,22,6,11,null,1,1,"no","G/G","No",1,80.87,"XP_015836929.1:c.[3493T>G]; XP_015836928.1:c.[4096T>G]; XP_008195400.1:c.[4084T>G]; XP_008195401.1:c.[4075T>G]; XP_008195399.1:c.[4096T>G]","XP_015836929.1:p.[Ser1165Ala]; XP_015836928.1:p.[Ser1366Ala]; XP_008195400.1:p.[Ser1362Ala]; XP_008195401.1:p.[Ser1359Ala]; XP_008195399.1:p.[Ser1366Ala]","LOC658515",658515,null,"658515 [Gene Symbol: LOC658515] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase T] [Gene Type: protein-coding]","LOC658515"]
[826,"NC_007422.5",3191169,"SNV","T","G","Homozygous",22,22,100,1,7,15,0.32,38.55,22,22,12,11,null,1,1,"no","G/G","No",1,86.9,"XP_008195401.1:c.[4855T>G]; XP_015836929.1:c.[4273T>G]; XP_008195400.1:c.[4864T>G]; XP_008195399.1:c.[4876T>G]; XP_015836928.1:c.[4819T>G]","XP_008195401.1:p.[Leu1619Val]; XP_015836929.1:p.[Leu1425Val]; XP_008195400.1:p.[Leu1622Val]; XP_008195399.1:p.[Leu1626Val]; XP_015836928.1:p.[Leu1607Val]","LOC658515",658515,null,"658515 [Gene Symbol: LOC658515] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase T] [Gene Type: protein-coding]","LOC658515"]
[828,"NC_007422.5",3209599,"SNV","A","C","Homozygous",20,20,100,1,13,12,0.48,37.8,25,25,12,14,null,1,1,"no","C/C","No",1,80.88,"XP_008195403.1:c.626T>G","XP_008195403.1:p.Met209Arg","LOC658740",658740,null,"658740 [Gene Symbol: LOC658740] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC658740] [Gene Type: protein-coding]","LOC658740"]
[829,"NC_007422.5",3231287,"SNV","C","G","Heterozygous",14,27,51.85,1,7,7,0.5,37.29,14,27,5,9,-0.7,0.72,0.88,"no","C/G","No",1,104.1,"XP_970673.1:c.[3695G>C]; XP_008195407.1:c.[331+287C>G]","XP_970673.1:p.Gly1232Ala","LOC103313580, LOC659255","103313580 , 659255",null,"103313580 [Gene Symbol: LOC103313580] [Locus Tag: TcasGA2_TC009609] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313580] [Gene Type: protein-coding] || 659255 [Gene Symbol: LOC659255] [Locus Tag: TcasGA2_TC009199] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC659255] [Gene Type: protein-coding]","LOC103313580; TcasGA2_TC009609 || TcasGA2_TC009199; LOC659255"]
[830,"NC_007422.5","3231289..3231290","MNV","CA","AG","Heterozygous",14,26,53.85,1,7,7,0.5,36.82,14,26,5,9,2.7,0.72,0.88,"no","complex","No",1,200,"XP_008195407.1:c.[331+289_331+290delCAinsAG]; XP_970673.1:c.[3692_3693delTGinsCT]","XP_970673.1:p.Val1231Ala","LOC103313580, LOC659255","103313580 , 659255",null,"103313580 [Gene Symbol: LOC103313580] [Locus Tag: TcasGA2_TC009609] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313580] [Gene Type: protein-coding] || 659255 [Gene Symbol: LOC659255] [Locus Tag: TcasGA2_TC009199] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC659255] [Gene Type: protein-coding]","LOC103313580; TcasGA2_TC009609 || TcasGA2_TC009199; LOC659255"]
[831,"NC_007422.5",3262540,"SNV","T","C","Homozygous",24,24,100,1,16,8,0.33,35.67,24,24,7,16,null,1,1,"no","C/C","No",1,92.92,"XP_971352.1:c.368T>C","XP_971352.1:p.Val123Ala","LOC659995",659995,null,"659995 [Gene Symbol: LOC659995] [Locus Tag: TcasGA2_TC009613] [Chromosome: LG7] [Map Location: ] [Description: WD repeat-containing protein 92] [Gene Type: protein-coding]","TcasGA2_TC009613; LOC659995"]
[832,"NC_007422.5",3272458,"SNV","T","G","Homozygous",26,26,100,1,20,9,0.31,38.42,29,29,11,17,null,1,1,"no","G/G","No",1,98.93,"XP_015836825.1:c.[1082A>C]; XP_008195415.1:c.[1082A>C]","XP_015836825.1:p.[His361Pro]; XP_008195415.1:p.[His361Pro]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[833,"NC_007422.5",3272507,"SNV","A","G","Homozygous",25,25,100,1,15,23,0.39,37.64,38,38,15,15,null,1,1,"no","G/G","No",1,92.92,"XP_015836825.1:c.[1033T>C]; XP_008195415.1:c.[1033T>C]","XP_015836825.1:p.[Ser345Pro]; XP_008195415.1:p.[Ser345Pro]","LOC103313582",103313582,null,"103313582 [Gene Symbol: LOC103313582] [Locus Tag: TcasGA2_TC009190] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313582] [Gene Type: protein-coding]","TcasGA2_TC009190; LOC103313582"]
[834,"NC_007422.5",3291920,"SNV","A","T","Homozygous",22,22,100,1,13,9,0.41,36.64,22,22,12,17,null,1,1,"no","T/T","No",1,88.54,"XP_015836826.1:c.[317T>A]; XP_015836827.1:c.[317T>A]","XP_015836826.1:p.[Phe106Tyr]; XP_015836827.1:p.[Phe106Tyr]","LOC660728",660728,null,"660728 [Gene Symbol: LOC660728] [Locus Tag: TcasGA2_TC009186] [Chromosome: LG7] [Map Location: ] [Description: alpha-mannosidase 2] [Gene Type: protein-coding]","TcasGA2_TC009186; LOC660728"]
[839,"NC_007422.5",3352514,"SNV","T","G","Heterozygous",25,40,62.5,1,11,14,0.44,38.72,25,42,3,11,2.79,0.1,0.9,"no","G/T","No",1,88.19,"XP_972538.1:c.558A>C","XP_972538.1:p.Glu186Asp","LOC661273",661273,null,"661273 [Gene Symbol: LOC661273] [Locus Tag: TcasGA2_TC009182] [Chromosome: LG7] [Map Location: ] [Description: squamous cell carcinoma antigen recognized by T-cells 3] [Gene Type: protein-coding]","TcasGA2_TC009182; LOC661273"]
[843,"NC_007422.5",3588809,"SNV","A","C","Heterozygous",11,23,47.83,1,9,3,0.25,36.73,12,25,4,9,-2.15,0.85,0.89,"no","A/C","No",1,91.36,"XP_015836786.1:c.1105T>G","XP_015836786.1:p.Ser369Ala","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[844,"NC_007422.5",3588819,"SNV","C","G","Homozygous",25,25,100,1,22,8,0.27,37.8,30,30,8,14,null,1,1,"no","G/G","No",1,95.93,"XP_015836786.1:c.1095G>C","XP_015836786.1:p.Glu365Asp","LOC662711",662711,null,"662711 [Gene Symbol: LOC662711] [Locus Tag: TcasGA2_TC009165] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC662711] [Gene Type: protein-coding]","TcasGA2_TC009165; LOC662711"]
[845,"NC_007422.5",3599368,"SNV","A","G","Homozygous",25,25,100,1,23,9,0.28,38.08,32,32,7,16,null,1,1,"no","G/G","No",1,95.93,"XP_967226.1:c.508A>G","XP_967226.1:p.Lys170Glu","LOC662210",662210,null,"662210 [Gene Symbol: LOC662210] [Locus Tag: TcasGA2_TC009648] [Chromosome: LG7] [Map Location: ] [Description: luciferin 4-monooxygenase] [Gene Type: protein-coding]","TcasGA2_TC009648; LOC662210"]
[849,"NC_007422.5",3622560,"SNV","C","T","Heterozygous",14,22,63.64,1,14,0,0,39.29,14,22,4,13,-0.07,0.23,0.43,"no","C/T","No",1,55.37,"XP_015837002.1:c.[289G>A]; XP_008195443.1:c.[289G>A]; XP_008195442.1:c.[289G>A]","XP_015837002.1:p.[Asp97Asn]; XP_008195443.1:p.[Asp97Asn]; XP_008195442.1:p.[Asp97Asn]","LOC663050",663050,null,"663050 [Gene Symbol: LOC663050] [Locus Tag: TcasGA2_TC009162] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663050] [Gene Type: protein-coding]","TcasGA2_TC009162; LOC663050"]
[850,"NC_007422.5","3622803..3622804","MNV","GC","TT","Heterozygous",14,20,70,1,4,14,0.22,38.89,18,25,5,11,0.97,0.94,1,"no","complex","No",1,200,"XP_008195442.1:c.[45_46delGCinsAA]; XP_015837002.1:c.[45_46delGCinsAA]; XP_008195443.1:c.[45_46delGCinsAA]","XP_008195442.1:p.[Arg16Ser]; XP_015837002.1:p.[Arg16Ser]; XP_008195443.1:p.[Arg16Ser]","LOC663050",663050,null,"663050 [Gene Symbol: LOC663050] [Locus Tag: TcasGA2_TC009162] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663050] [Gene Type: protein-coding]","TcasGA2_TC009162; LOC663050"]
[851,"NC_007422.5","3623438..3623439","MNV","GT","AA","Heterozygous",6,20,30,1,0,6,0,40.75,6,20,3,2,2.73,0.82,0.88,"no","complex","No",1,200,"XP_974231.1:c.332_333delGTinsAA","XP_974231.1:p.Gly111Glu","LOC663077",663077,null,"663077 [Gene Symbol: LOC663077] [Locus Tag: TcasGA2_TC009654] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC663077] [Gene Type: protein-coding]","TcasGA2_TC009654; LOC663077"]
[854,"NC_007422.5","3746136^3746137","Insertion","-","GCT","Homozygous",39,43,90.7,1,0,39,0,38.36,39,43,8,19,1.9,1,1,"no","GCT/GCT","No",1,200,"XP_015836977.1:c.[1516_1517insAGC]; XP_015836976.1:c.[1600_1601insAGC]","XP_015836977.1:p.[Gln505_Arg506insGln]; XP_015836976.1:p.[Gln533_Arg534insGln]","LOC663408",663408,null,"663408 [Gene Symbol: LOC663408] [Locus Tag: TcasGA2_TC009151] [Chromosome: LG7] [Map Location: ] [Description: membralin] [Gene Type: protein-coding]","TcasGA2_TC009151; LOC663408"]
[855,"NC_007422.5",3806413,"SNV","T","G","Homozygous",22,22,100,1,22,9,0.29,37.73,31,31,9,14,null,1,1,"no","G/G","No",1,86.9,"XP_008195456.1:c.2138A>C","XP_008195456.1:p.Lys713Thr","LOC663570",663570,null,"663570 [Gene Symbol: LOC663570] [Locus Tag: TcasGA2_TC009148] [Chromosome: LG7] [Map Location: ] [Description: tetratricopeptide repeat protein 37] [Gene Type: protein-coding]","LOC663570; TcasGA2_TC009148"]
[857,"NC_007422.5",4097266,"SNV","C","T","Homozygous",21,21,100,1,6,17,0.26,38.81,23,23,9,10,null,1,1,"no","T/T","No",1,85.53,"XP_008200152.1:c.98G>A","XP_008200152.1:p.Gly33Asp","LOC657845",657845,null,"657845 [Gene Symbol: LOC657845] [Locus Tag: TcasGA2_TC015943] [Chromosome: LG7] [Map Location: ] [Description: ATP-dependent RNA helicase DDX24] [Gene Type: protein-coding]","TcasGA2_TC015943; LOC657845"]
[858,"NC_007422.5",4132082,"SNV","C","A","Heterozygous",14,22,63.64,1,11,8,0.42,35.5,19,29,8,9,-2.12,0.22,0.86,"no","A/C","No",1,57.07,"XP_968571.3:c.[556C>A]; XP_008200143.1:c.[556C>A]","XP_968571.3:p.[Leu186Ile]; XP_008200143.1:p.[Leu186Ile]","LOC656985",656985,null,"656985 [Gene Symbol: LOC656985] [Locus Tag: TcasGA2_TC015912] [Chromosome: LG7] [Map Location: ] [Description: ornithine decarboxylase 1] [Gene Type: protein-coding]","TcasGA2_TC015912; LOC656985"]
[859,"NC_007422.5",4152272,"SNV","A","G","Heterozygous",12,31,38.71,1,12,2,0.14,37.33,14,41,6,6,-0.49,0.3,0.52,"no","A/G","No",1,81.32,"XP_015836868.1:c.[77A>G]; XP_015836869.1:c.[77A>G]; XP_008200131.2:c.[77A>G]; XP_015836867.1:c.[77A>G]","XP_015836868.1:p.[Asn26Ser]; XP_015836869.1:p.[Asn26Ser]; XP_008200131.2:p.[Asn26Ser]; XP_015836867.1:p.[Asn26Ser]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[860,"NC_007422.5",4152547,"SNV","A","T","Heterozygous",19,33,57.58,1,4,15,0.21,36.63,19,33,8,12,1.02,0.56,0.9,"no","A/T","No",1,99.75,"XP_015836869.1:c.[352A>T]; XP_015836867.1:c.[352A>T]; XP_015836868.1:c.[352A>T]; XP_008200131.2:c.[352A>T]","XP_015836869.1:p.[Thr118Ser]; XP_015836867.1:p.[Thr118Ser]; XP_015836868.1:p.[Thr118Ser]; XP_008200131.2:p.[Thr118Ser]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[862,"NC_007422.5",4155540,"SNV","A","T","Homozygous",26,26,100,1,12,19,0.39,37.58,31,31,9,19,null,1,1,"no","T/T","No",1,100.57,"XP_015836867.1:c.[2944A>T]; XP_015836869.1:c.[2848A>T]; XP_015836868.1:c.[2941A>T]; XP_008200131.2:c.[2944A>T]","XP_015836867.1:p.[Thr982Ser]; XP_015836869.1:p.[Thr950Ser]; XP_015836868.1:p.[Thr981Ser]; XP_008200131.2:p.[Thr982Ser]","LOC656476",656476,null,"656476 [Gene Symbol: LOC656476] [Locus Tag: TcasGA2_TC015915] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: kinesin 4B] [Gene Type: protein-coding]","TcasGA2_TC015915; LOC656476; kinesin-4B"]
[864,"NC_007422.5",4371145,"SNV","G","T","Heterozygous",12,20,60,1,4,8,0.33,37.67,12,20,7,4,-1.7,0.9,1,"no","G/T","No",1,62.3,"XP_966655.1:c.1000G>T","XP_966655.1:p.Val334Leu","LOC655069",655069,null,"655069 [Gene Symbol: LOC655069] [Locus Tag: TcasGA2_TC009680] [Chromosome: LG7] [Map Location: ] [Description: retinol dehydrogenase 12] [Gene Type: protein-coding]","LOC655069; TcasGA2_TC009680"]
[867,"NC_007422.5",4623982,"SNV","G","C","Homozygous",20,20,100,1,12,11,0.48,38.45,23,23,11,12,null,1,1,"no","C/C","No",1,80.88,"XP_008195484.1:c.868G>C","XP_008195484.1:p.Val290Leu","LOC655695",655695,null,"655695 [Gene Symbol: LOC655695] [Locus Tag: TcasGA2_TC009693] [Chromosome: LG7] [Map Location: ] [Description: acetylcholinesterase] [Gene Type: protein-coding]","LOC655695; TcasGA2_TC009693"]
[869,"NC_007422.5","4660304^4660305","Insertion","-","TTCAAT","Homozygous",20,20,100,1,8,15,0.35,39.4,23,23,10,12,null,1,1,"no","TTCAAT/TTCAAT","No",1,200,"XP_008195485.1:c.665_666insATTGAA","XP_008195485.1:p.Lys221_Asn222insLysLeu","LOC103313595",103313595,null,"103313595 [Gene Symbol: LOC103313595] [Locus Tag: TcasGA2_TC033632] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313595] [Gene Type: protein-coding]","LOC103313595; TcasGA2_TC033632"]
[871,"NC_007422.5",4708338,"SNV","A","G","Homozygous",20,20,100,1,14,12,0.46,37.6,26,26,11,13,null,1,1,"no","G/G","No",1,80.88,"XP_969201.1:c.1562A>G","XP_969201.1:p.Asn521Ser","LOC657661",657661,null,"657661 [Gene Symbol: LOC657661] [Locus Tag: TcasGA2_TC009707] [Chromosome: LG7] [Map Location: ] [Description: methionine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC657661; TcasGA2_TC009707"]
[873,"NC_007422.5",4873653,"SNV","A","T","Homozygous",23,23,100,1,20,8,0.29,38,28,28,14,18,null,1,1,"no","T/T","No",1,91.54,"XP_015836813.1:c.298A>T","XP_015836813.1:p.Thr100Ser","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[874,"NC_007422.5",4878201,"SNV","G","A","Homozygous",46,46,100,1,37,26,0.41,36.22,63,63,15,26,null,1,1,"no","A/A","No",1,200,"XP_015836813.1:c.4652G>A","XP_015836813.1:p.Gly1551Glu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[875,"NC_007422.5",4878213,"SNV","G","C","Homozygous",43,43,100,1,29,25,0.46,36.72,54,54,16,24,null,1,1,"no","C/C","No",1,146.76,"XP_015836813.1:c.4664G>C","XP_015836813.1:p.Arg1555Pro","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[876,"NC_007422.5",4878234,"SNV","G","A","Homozygous",37,37,100,1,13,32,0.29,37.68,45,45,10,17,null,1,1,"no","A/A","No",1,133.64,"XP_015836813.1:c.4685G>A","XP_015836813.1:p.Arg1562Lys","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[877,"NC_007422.5",4878291,"SNV","T","C","Homozygous",28,28,100,1,2,27,0.07,38.68,29,29,9,13,null,1,1,"no","C/C","No",1,104.96,"XP_015836813.1:c.4742T>C","XP_015836813.1:p.Phe1581Ser","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[878,"NC_007422.5",4878297,"SNV","C","T","Homozygous",28,28,100,1,2,27,0.07,40.11,29,29,9,13,null,1,1,"no","T/T","No",1,106.59,"XP_015836813.1:c.4748C>T","XP_015836813.1:p.Ser1583Leu","LOC659597",659597,null,"659597 [Gene Symbol: LOC659597] [Locus Tag: TcasGA2_TC009719] [Chromosome: LG7] [Map Location: ] [Description: dynein heavy chain 10, axonemal] [Gene Type: protein-coding]","LOC659597; TcasGA2_TC009719"]
[882,"NC_007422.5",5142033,"SNV","A","T","Heterozygous",10,21,47.62,1,3,8,0.27,35.9,11,23,4,5,-0.81,0.35,0.68,"no","A/T","No",1,72.13,"XP_008192730.1:c.[910A>T]; XP_015837007.1:c.[892A>T]","XP_008192730.1:p.[Thr304Ser]; XP_015837007.1:p.[Thr298Ser]","LOC103312836, LOC660572","103312836 , 660572",null,"103312836 [Gene Symbol: LOC103312836] [Locus Tag: TcasGA2_TC009101] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: hemicentin-2] [Gene Type: protein-coding] || 660572 [Gene Symbol: LOC660572] [Locus Tag: TcasGA2_TC010578] [Chromosome: LG7] [Map Location: ] [Description: fatty acyl-CoA reductase 1] [Gene Type: protein-coding]","LOC103312836; TcasGA2_TC009101 || LOC660572; TcasGA2_TC010578"]
[884,"NC_007422.5",6539928,"SNV","T","C","Heterozygous",10,20,50,1,6,4,0.4,38.1,10,22,4,7,0.08,0.24,0.88,"no","C/T","No",1,82.52,"XP_008195371.1:c.[112A>G]; XP_015837029.1:c.[112A>G]; XP_015837030.1:c.[112A>G]; XP_015837031.1:c.[112A>G]","XP_008195371.1:p.[Ile38Val]; XP_015837029.1:p.[Ile38Val]; XP_015837030.1:p.[Ile38Val]; XP_015837031.1:p.[Ile38Val]","LOC103313573",103313573,null,"103313573 [Gene Symbol: LOC103313573] [Locus Tag: TcasGA2_TC009100] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313573] [Gene Type: protein-coding]","LOC103313573; TcasGA2_TC009100"]
[885,"NC_007422.5","6749054..6749055","MNV","AC","GT","Homozygous",20,20,100,1,13,10,0.43,39.12,23,23,9,10,null,1,1,"no","GT/GT","No",1,200,"XP_008199978.1:c.[786_787delACinsGT]; XP_015837270.1:c.[534_535delACinsGT]","XP_008199978.1:p.[Leu263Phe]; XP_015837270.1:p.[Leu179Phe]","LOC658003",658003,null,"658003 [Gene Symbol: LOC658003] [Locus Tag: TcasGA2_TC016340] [Chromosome: LG7] [Map Location: ] [Description: FERM domain-containing protein 8] [Gene Type: protein-coding]","TcasGA2_TC016340; LOC658003"]
[887,"NC_007422.5",7006507,"SNV","A","G","Homozygous",23,23,100,1,12,13,0.48,37.96,25,25,9,14,null,1,1,"no","G/G","No",1,89.91,"XP_976180.1:c.650A>G","XP_976180.1:p.Lys217Arg","LOC656310",656310,null,"656310 [Gene Symbol: LOC656310] [Locus Tag: TcasGA2_TC016358] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC656310] [Gene Type: protein-coding]","LOC656310; TcasGA2_TC016358"]
[888,"NC_007422.5",7222280,"SNV","T","G","Homozygous",22,22,100,1,13,9,0.41,38.95,22,22,7,16,null,1,1,"no","G/G","No",1,86.9,"XP_015837148.1:c.[218A>C]; XP_015837146.1:c.[329A>C]; XP_015837147.1:c.[329A>C]","XP_015837148.1:p.[Lys73Thr]; XP_015837146.1:p.[Lys110Thr]; XP_015837147.1:p.[Lys110Thr]","LOC107398245",107398245,null,"107398245 [Gene Symbol: LOC107398245] [Locus Tag: TcasGA2_TC009079] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398245] [Gene Type: protein-coding]","TcasGA2_TC009079; LOC107398245"]
[889,"NC_007422.5",7295082,"SNV","C","A","Homozygous",28,28,100,1,24,16,0.4,36.71,40,40,14,16,null,1,1,"no","A/A","No",1,106.56,"XP_015837173.1:c.[9097G>T]; XP_008199740.1:c.[9055G>T]; XP_015837197.1:c.[9073G>T]; XP_015837169.1:c.[9136G>T]; XP_015837168.1:c.[9148G>T]; XP_008199748.1:c.[8995G>T]; XP_015837198.1:c.[4848+4324G>T]; XP_015837166.1:c.[9172G>T]; XP_015837182.1:c.[9172G>T]; XP_008199742.1:c.[8968G>T]; XP_015837178.1:c.[9172G>T]; XP_015837187.1:c.[8992G>T]; XP_015837165.1:c.[9172G>T]; XP_015837194.1:c.[9172G>T]; XP_015837172.1:c.[9172G>T]; XP_015837184.1:c.[9019G>T]; XP_008199741.1:c.[8995G>T]; XP_015837167.1:c.[9154G>T]; XP_015837177.1:c.[9070G>T]; XP_015837174.1:c.[9172G>T]; XP_015837175.1:c.[9094G>T]; XP_015837192.1:c.[9172G>T]; XP_015837188.1:c.[9172G>T]; XP_015837183.1:c.[9172G>T]; XP_015837196.1:c.[4848+4324G>T]; XP_015837180.1:c.[9058G>T]; XP_015837181.1:c.[9055G>T]; XP_015837185.1:c.[9172G>T]; XP_015837193.1:c.[9172G>T]; XP_015837170.1:c.[9172G>T]; XP_015837176.1:c.[9079G>T]; XP_008199749.1:c.[8968G>T]; XP_015837190.1:c.[9172G>T]; XP_015837189.1:c.[9172G>T]; XP_015837171.1:c.[9118G>T]; XP_015837195.1:c.[5041G>T]; XP_015837191.1:c.[8968G>T]; XP_015837179.1:c.[9172G>T]; XP_015837186.1:c.[8995G>T]","XP_015837173.1:p.[Val3033Phe]; XP_008199740.1:p.[Val3019Phe]; XP_015837197.1:p.[Val3025Phe]; XP_015837169.1:p.[Val3046Phe]; XP_015837168.1:p.[Val3050Phe]; XP_008199748.1:p.[Val2999Phe]; XP_015837166.1:p.[Val3058Phe]; XP_015837182.1:p.[Val3058Phe]; XP_008199742.1:p.[Val2990Phe]; XP_015837178.1:p.[Val3058Phe]; XP_015837187.1:p.[Val2998Phe]; XP_015837165.1:p.[Val3058Phe]; XP_015837194.1:p.[Val3058Phe]; XP_015837172.1:p.[Val3058Phe]; XP_015837184.1:p.[Val3007Phe]; XP_008199741.1:p.[Val2999Phe]; XP_015837167.1:p.[Val3052Phe]; XP_015837177.1:p.[Val3024Phe]; XP_015837174.1:p.[Val3058Phe]; XP_015837175.1:p.[Val3032Phe]; XP_015837192.1:p.[Val3058Phe]; XP_015837188.1:p.[Val3058Phe]; XP_015837183.1:p.[Val3058Phe]; XP_015837180.1:p.[Val3020Phe]; XP_015837181.1:p.[Val3019Phe]; XP_015837185.1:p.[Val3058Phe]; XP_015837193.1:p.[Val3058Phe]; XP_015837170.1:p.[Val3058Phe]; XP_015837176.1:p.[Val3027Phe]; XP_008199749.1:p.[Val2990Phe]; XP_015837190.1:p.[Val3058Phe]; XP_015837189.1:p.[Val3058Phe]; XP_015837171.1:p.[Val3040Phe]; XP_015837195.1:p.[Val1681Phe]; XP_015837191.1:p.[Val2990Phe]; XP_015837179.1:p.[Val3058Phe]; XP_015837186.1:p.[Val2999Phe]","LOC662585",662585,null,"662585 [Gene Symbol: LOC662585] [Locus Tag: TcasGA2_TC009076] [Chromosome: LG7] [Map Location: ] [Description: microtubule-actin cross-linking factor 1] [Gene Type: protein-coding]","TcasGA2_TC009076; LOC662585"]
[890,"NC_007422.5",7297294,"SNV","T","G","Homozygous",26,26,100,1,12,14,0.46,39.77,26,26,9,15,null,1,1,"no","G/G","No",1,98.94,"XP_015837183.1:c.[6960A>C]; XP_015837173.1:c.[6885A>C]; XP_015837185.1:c.[6960A>C]; XP_015837197.1:c.[6861A>C]; XP_015837177.1:c.[6858A>C]; XP_008199748.1:c.[6783A>C]; XP_015837181.1:c.[6843A>C]; XP_015837167.1:c.[6942A>C]; XP_015837176.1:c.[6867A>C]; XP_008199741.1:c.[6783A>C]; XP_015837194.1:c.[6960A>C]; XP_015837196.1:c.[4848+2112A>C]; XP_015837189.1:c.[6960A>C]; XP_008199749.1:c.[6756A>C]; XP_015837182.1:c.[6960A>C]; XP_015837191.1:c.[6756A>C]; XP_015837187.1:c.[6780A>C]; XP_008199740.1:c.[6843A>C]; XP_015837170.1:c.[6960A>C]; XP_015837184.1:c.[6807A>C]; XP_015837166.1:c.[6960A>C]; XP_015837171.1:c.[6906A>C]; XP_015837175.1:c.[6882A>C]; XP_015837186.1:c.[6783A>C]; XP_015837169.1:c.[6924A>C]; XP_015837172.1:c.[6960A>C]; XP_015837193.1:c.[6960A>C]; XP_015837168.1:c.[6936A>C]; XP_015837165.1:c.[6960A>C]; XP_015837190.1:c.[6960A>C]; XP_015837178.1:c.[6960A>C]; XP_008199742.1:c.[6756A>C]; XP_015837188.1:c.[6960A>C]; XP_015837180.1:c.[6846A>C]; XP_015837198.1:c.[4848+2112A>C]; XP_015837179.1:c.[6960A>C]; XP_015837174.1:c.[6960A>C]; XP_015837192.1:c.[6960A>C]; XP_015837195.1:c.[2829A>C]","XP_015837183.1:p.[Glu2320Asp]; XP_015837173.1:p.[Glu2295Asp]; XP_015837185.1:p.[Glu2320Asp]; XP_015837197.1:p.[Glu2287Asp]; XP_015837177.1:p.[Glu2286Asp]; XP_008199748.1:p.[Glu2261Asp]; XP_015837181.1:p.[Glu2281Asp]; XP_015837167.1:p.[Glu2314Asp]; XP_015837176.1:p.[Glu2289Asp]; XP_008199741.1:p.[Glu2261Asp]; XP_015837194.1:p.[Glu2320Asp]; XP_015837189.1:p.[Glu2320Asp]; XP_008199749.1:p.[Glu2252Asp]; XP_015837182.1:p.[Glu2320Asp]; XP_015837191.1:p.[Glu2252Asp]; XP_015837187.1:p.[Glu2260Asp]; XP_008199740.1:p.[Glu2281Asp]; XP_015837170.1:p.[Glu2320Asp]; XP_015837184.1:p.[Glu2269Asp]; XP_015837166.1:p.[Glu2320Asp]; XP_015837171.1:p.[Glu2302Asp]; XP_015837175.1:p.[Glu2294Asp]; XP_015837186.1:p.[Glu2261Asp]; XP_015837169.1:p.[Glu2308Asp]; XP_015837172.1:p.[Glu2320Asp]; XP_015837193.1:p.[Glu2320Asp]; XP_015837168.1:p.[Glu2312Asp]; XP_015837165.1:p.[Glu2320Asp]; XP_015837190.1:p.[Glu2320Asp]; XP_015837178.1:p.[Glu2320Asp]; XP_008199742.1:p.[Glu2252Asp]; XP_015837188.1:p.[Glu2320Asp]; XP_015837180.1:p.[Glu2282Asp]; XP_015837179.1:p.[Glu2320Asp]; XP_015837174.1:p.[Glu2320Asp]; XP_015837192.1:p.[Glu2320Asp]; XP_015837195.1:p.[Glu943Asp]","LOC662585",662585,null,"662585 [Gene Symbol: LOC662585] [Locus Tag: TcasGA2_TC009076] [Chromosome: LG7] [Map Location: ] [Description: microtubule-actin cross-linking factor 1] [Gene Type: protein-coding]","TcasGA2_TC009076; LOC662585"]
[891,"NC_007422.5",7297296,"SNV","C","T","Homozygous",26,26,100,1,12,14,0.46,39.81,26,26,9,15,null,1,1,"no","T/T","No",1,100.57,"XP_015837178.1:c.[6958G>A]; XP_015837177.1:c.[6856G>A]; XP_015837175.1:c.[6880G>A]; XP_015837191.1:c.[6754G>A]; XP_015837193.1:c.[6958G>A]; XP_015837192.1:c.[6958G>A]; XP_008199742.1:c.[6754G>A]; XP_015837166.1:c.[6958G>A]; XP_015837194.1:c.[6958G>A]; XP_015837165.1:c.[6958G>A]; XP_015837174.1:c.[6958G>A]; XP_015837182.1:c.[6958G>A]; XP_015837188.1:c.[6958G>A]; XP_015837167.1:c.[6940G>A]; XP_015837176.1:c.[6865G>A]; XP_015837198.1:c.[4848+2110G>A]; XP_008199740.1:c.[6841G>A]; XP_015837180.1:c.[6844G>A]; XP_008199741.1:c.[6781G>A]; XP_008199749.1:c.[6754G>A]; XP_015837190.1:c.[6958G>A]; XP_015837172.1:c.[6958G>A]; XP_015837196.1:c.[4848+2110G>A]; XP_015837169.1:c.[6922G>A]; XP_015837173.1:c.[6883G>A]; XP_015837170.1:c.[6958G>A]; XP_015837189.1:c.[6958G>A]; XP_015837187.1:c.[6778G>A]; XP_015837171.1:c.[6904G>A]; XP_015837179.1:c.[6958G>A]; XP_015837185.1:c.[6958G>A]; XP_008199748.1:c.[6781G>A]; XP_015837195.1:c.[2827G>A]; XP_015837181.1:c.[6841G>A]; XP_015837197.1:c.[6859G>A]; XP_015837184.1:c.[6805G>A]; XP_015837168.1:c.[6934G>A]; XP_015837183.1:c.[6958G>A]; XP_015837186.1:c.[6781G>A]","XP_015837178.1:p.[Glu2320Lys]; XP_015837177.1:p.[Glu2286Lys]; XP_015837175.1:p.[Glu2294Lys]; XP_015837191.1:p.[Glu2252Lys]; XP_015837193.1:p.[Glu2320Lys]; XP_015837192.1:p.[Glu2320Lys]; XP_008199742.1:p.[Glu2252Lys]; XP_015837166.1:p.[Glu2320Lys]; XP_015837194.1:p.[Glu2320Lys]; XP_015837165.1:p.[Glu2320Lys]; XP_015837174.1:p.[Glu2320Lys]; XP_015837182.1:p.[Glu2320Lys]; XP_015837188.1:p.[Glu2320Lys]; XP_015837167.1:p.[Glu2314Lys]; XP_015837176.1:p.[Glu2289Lys]; XP_008199740.1:p.[Glu2281Lys]; XP_015837180.1:p.[Glu2282Lys]; XP_008199741.1:p.[Glu2261Lys]; XP_008199749.1:p.[Glu2252Lys]; XP_015837190.1:p.[Glu2320Lys]; XP_015837172.1:p.[Glu2320Lys]; XP_015837169.1:p.[Glu2308Lys]; XP_015837173.1:p.[Glu2295Lys]; XP_015837170.1:p.[Glu2320Lys]; XP_015837189.1:p.[Glu2320Lys]; XP_015837187.1:p.[Glu2260Lys]; XP_015837171.1:p.[Glu2302Lys]; XP_015837179.1:p.[Glu2320Lys]; XP_015837185.1:p.[Glu2320Lys]; XP_008199748.1:p.[Glu2261Lys]; XP_015837195.1:p.[Glu943Lys]; XP_015837181.1:p.[Glu2281Lys]; XP_015837197.1:p.[Glu2287Lys]; XP_015837184.1:p.[Glu2269Lys]; XP_015837168.1:p.[Glu2312Lys]; XP_015837183.1:p.[Glu2320Lys]; XP_015837186.1:p.[Glu2261Lys]","LOC662585",662585,null,"662585 [Gene Symbol: LOC662585] [Locus Tag: TcasGA2_TC009076] [Chromosome: LG7] [Map Location: ] [Description: microtubule-actin cross-linking factor 1] [Gene Type: protein-coding]","TcasGA2_TC009076; LOC662585"]
[892,"NC_007422.5",8059550,"SNV","G","A","Homozygous",22,22,100,1,11,16,0.41,36.77,27,27,10,14,null,1,1,"no","A/A","No",1,88.51,"XP_015837047.1:c.[103-1665G>A]; XP_008195570.1:c.[14C>T]; XP_015837048.1:c.[94-1665G>A]","XP_008195570.1:p.Ala5Val","Fdl, LOC103313618","656027 , 103313618","fused lobes","656027 [Gene Symbol: Fdl] [Locus Tag: TcasGA2_TC009779] [Chromosome: LG7] [Map Location: ] [Description: fused lobes] [Gene Type: protein-coding] || 103313618 [Gene Symbol: LOC103313618] [Locus Tag: TcasGA2_TC009051] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313618] [Gene Type: protein-coding]","TcasGA2_TC009779; Fdl || TcasGA2_TC009051; LOC103313618"]
[893,"NC_007422.5",8136209,"SNV","T","C","Homozygous",21,21,100,1,6,16,0.27,38.62,22,22,8,15,null,1,1,"no","C/C","No",1,83.89,"XP_008195582.1:c.[658A>G]; XP_008195581.1:c.[667A>G]","XP_008195582.1:p.[Ser220Gly]; XP_008195581.1:p.[Ser223Gly]","LOC103313620",103313620,null,"103313620 [Gene Symbol: LOC103313620] [Locus Tag: TcasGA2_TC009045] [Chromosome: LG7] [Map Location: ] [Description: proteoglycan 4] [Gene Type: protein-coding]","LOC103313620; TcasGA2_TC009045"]
[894,"NC_007422.5",8522535,"SNV","G","A","Homozygous",20,20,100,1,4,20,0.17,39.15,24,24,7,9,null,1,1,"no","A/A","No",1,82.49,"XP_015837678.1:c.1129G>A","XP_015837678.1:p.Glu377Lys","LOC103313648",103313648,null,"103313648 [Gene Symbol: LOC103313648] [Locus Tag: TcasGA2_TC033701] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313648] [Gene Type: protein-coding]","LOC103313648; TcasGA2_TC033701"]
[895,"NC_007422.5",8528422,"SNV","T","C","Homozygous",22,22,100,1,20,5,0.2,37.95,25,25,13,14,null,1,1,"no","C/C","No",1,86.9,"XP_015837059.1:c.3518T>C","XP_015837059.1:p.Ile1173Thr","LOC107398214",107398214,null,"107398214 [Gene Symbol: LOC107398214] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","LOC107398214"]
[896,"NC_007422.5",8628149,"SNV","A","G","Homozygous",21,21,100,1,11,13,0.46,38.86,24,24,9,16,null,1,1,"no","G/G","No",1,83.89,"XP_015837510.1:c.[2119A>G]; XP_008195639.2:c.[2119A>G]; XP_015837509.1:c.[2119A>G]; XP_015837511.1:c.[2119A>G]","XP_015837510.1:p.[Met707Val]; XP_008195639.2:p.[Met707Val]; XP_015837509.1:p.[Met707Val]; XP_015837511.1:p.[Met707Val]","LOC103313637",103313637,null,"103313637 [Gene Symbol: LOC103313637] [Locus Tag: TcasGA2_TC009820] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC103313637] [Gene Type: protein-coding]","TcasGA2_TC009820; LOC103313637"]
[897,"NC_007422.5",8628180,"SNV","A","G","Homozygous",20,20,100,1,18,11,0.38,36.8,29,29,7,12,null,1,1,"no","G/G","No",1,80.88,"XP_015837510.1:c.[2150A>G]; XP_008195639.2:c.[2150A>G]; XP_015837511.1:c.[2150A>G]; XP_015837509.1:c.[2150A>G]","XP_015837510.1:p.[Asn717Ser]; XP_008195639.2:p.[Asn717Ser]; XP_015837511.1:p.[Asn717Ser]; XP_015837509.1:p.[Asn717Ser]","LOC103313637",103313637,null,"103313637 [Gene Symbol: LOC103313637] [Locus Tag: TcasGA2_TC009820] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC103313637] [Gene Type: protein-coding]","TcasGA2_TC009820; LOC103313637"]
[898,"NC_007422.5",8628197,"SNV","C","G","Homozygous",24,24,100,1,22,9,0.29,36.08,31,31,6,16,null,1,1,"no","G/G","No",1,92.92,"XP_008195639.2:c.[2167C>G]; XP_015837511.1:c.[2167C>G]; XP_015837509.1:c.[2167C>G]; XP_015837510.1:c.[2167C>G]","XP_008195639.2:p.[Gln723Glu]; XP_015837511.1:p.[Gln723Glu]; XP_015837509.1:p.[Gln723Glu]; XP_015837510.1:p.[Gln723Glu]","LOC103313637",103313637,null,"103313637 [Gene Symbol: LOC103313637] [Locus Tag: TcasGA2_TC009820] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC103313637] [Gene Type: protein-coding]","TcasGA2_TC009820; LOC103313637"]
[899,"NC_007422.5",8628220,"SNV","G","C","Homozygous",33,33,100,1,23,20,0.47,35.94,43,43,9,18,null,1,1,"no","C/C","No",1,116.99,"XP_008195639.2:c.[2190G>C]; XP_015837510.1:c.[2190G>C]; XP_015837509.1:c.[2190G>C]; XP_015837511.1:c.[2190G>C]","XP_008195639.2:p.[Gln730His]; XP_015837510.1:p.[Gln730His]; XP_015837509.1:p.[Gln730His]; XP_015837511.1:p.[Gln730His]","LOC103313637",103313637,null,"103313637 [Gene Symbol: LOC103313637] [Locus Tag: TcasGA2_TC009820] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC103313637] [Gene Type: protein-coding]","TcasGA2_TC009820; LOC103313637"]
[900,"NC_007422.5","8628246..8628247","MNV","TT","CG","Homozygous",31,31,100,1,14,26,0.35,36.67,40,40,9,17,null,1,1,"no","CG/CG","No",1,200,"XP_008195639.2:c.[2216_2217delTTinsCG]; XP_015837511.1:c.[2216_2217delTTinsCG]; XP_015837509.1:c.[2216_2217delTTinsCG]; XP_015837510.1:c.[2216_2217delTTinsCG]","XP_008195639.2:p.[Val739Ala]; XP_015837511.1:p.[Val739Ala]; XP_015837509.1:p.[Val739Ala]; XP_015837510.1:p.[Val739Ala]","LOC103313637",103313637,null,"103313637 [Gene Symbol: LOC103313637] [Locus Tag: TcasGA2_TC009820] [Chromosome: LG7] [Map Location: LG7|LG7] [Description: uncharacterized LOC103313637] [Gene Type: protein-coding]","TcasGA2_TC009820; LOC103313637"]
[902,"NC_007422.5",8945372,"SNV","T","C","Homozygous",27,27,100,1,6,25,0.19,38.41,31,31,12,15,null,1,1,"no","C/C","No",1,101.94,"XP_973509.2:c.98A>G","XP_973509.2:p.Asp33Gly","LOC662310",662310,null,"662310 [Gene Symbol: LOC662310] [Locus Tag: TcasGA2_TC008999] [Chromosome: LG7] [Map Location: ] [Description: SAYSvFN domain-containing protein 1] [Gene Type: protein-coding]","LOC662310; TcasGA2_TC008999"]
[903,"NC_007422.5",8945381,"SNV","T","C","Homozygous",28,28,100,1,8,24,0.25,37.86,32,32,13,16,null,1,1,"no","C/C","No",1,104.96,"XP_973509.2:c.89A>G","XP_973509.2:p.Asn30Ser","LOC662310",662310,null,"662310 [Gene Symbol: LOC662310] [Locus Tag: TcasGA2_TC008999] [Chromosome: LG7] [Map Location: ] [Description: SAYSvFN domain-containing protein 1] [Gene Type: protein-coding]","LOC662310; TcasGA2_TC008999"]
[904,"NC_007422.5",9049999,"SNV","A","C","Heterozygous",10,24,41.67,1,10,3,0.23,35.9,13,27,3,6,-1.2,0.09,0.59,"no","A/C","No",1,77.06,"XP_008195667.1:c.[3167A>C]; XP_008195668.1:c.[3155A>C]; XP_015837244.1:c.[3167A>C]; XP_015837245.1:c.[767A>C]; XP_008195669.1:c.[3152A>C]; XP_008195666.1:c.[3167A>C]","XP_008195667.1:p.[Asn1056Thr]; XP_008195668.1:p.[Asn1052Thr]; XP_015837244.1:p.[Asn1056Thr]; XP_015837245.1:p.[Asn256Thr]; XP_008195669.1:p.[Asn1051Thr]; XP_008195666.1:p.[Asn1056Thr]","LOC662712",662712,null,"662712 [Gene Symbol: LOC662712] [Locus Tag: TcasGA2_TC009848] [Chromosome: LG7] [Map Location: ] [Description: baculoviral IAP repeat-containing protein 6] [Gene Type: protein-coding]","TcasGA2_TC009848; LOC662712"]
[905,"NC_007422.5",9055102,"SNV","G","C","Homozygous",23,23,100,1,7,16,0.3,36.83,23,23,10,10,null,1,1,"no","C/C","No",1,89.91,"XP_008195667.1:c.[5242G>C]; XP_008195669.1:c.[5227G>C]; XP_015837244.1:c.[5242G>C]; XP_015837245.1:c.[2842G>C]; XP_008195666.1:c.[5242G>C]; XP_008195668.1:c.[5230G>C]","XP_008195667.1:p.[Ala1748Pro]; XP_008195669.1:p.[Ala1743Pro]; XP_015837244.1:p.[Ala1748Pro]; XP_015837245.1:p.[Ala948Pro]; XP_008195666.1:p.[Ala1748Pro]; XP_008195668.1:p.[Ala1744Pro]","LOC662712",662712,null,"662712 [Gene Symbol: LOC662712] [Locus Tag: TcasGA2_TC009848] [Chromosome: LG7] [Map Location: ] [Description: baculoviral IAP repeat-containing protein 6] [Gene Type: protein-coding]","TcasGA2_TC009848; LOC662712"]
[906,"NC_007422.5",9065789,"Deletion","G","-","Homozygous",29,29,100,1,15,18,0.45,37.52,33,33,11,20,null,1,1,"no","-/-","No",1,116.06,"XP_008195672.2:c.842delG","XP_008195672.2:p.Gly282fs","LOC662742",662742,null,"662742 [Gene Symbol: LOC662742] [Locus Tag: TcasGA2_TC009849] [Chromosome: LG7] [Map Location: ] [Description: zinc finger protein 260] [Gene Type: protein-coding]","TcasGA2_TC009849; LOC662742"]
[907,"NC_007422.5",9083202,"SNV","G","C","Heterozygous",11,26,42.31,1,11,0,0,38.55,11,28,2,10,1.43,0.14,0.21,"no","C/G","No",1,81.55,"XP_015837247.1:c.[411C>G]; XP_008195676.1:c.[411C>G]; XP_008195675.1:c.[411C>G]; XP_015837248.1:c.[411C>G]; XP_008195674.1:c.[411C>G]","XP_015837247.1:p.[Asp137Glu]; XP_008195676.1:p.[Asp137Glu]; XP_008195675.1:p.[Asp137Glu]; XP_015837248.1:p.[Asp137Glu]; XP_008195674.1:p.[Asp137Glu]","LOC662829",662829,null,"662829 [Gene Symbol: LOC662829] [Locus Tag: TcasGA2_TC008993] [Chromosome: LG7] [Map Location: ] [Description: metastasis suppressor protein 1] [Gene Type: protein-coding]","TcasGA2_TC008993; LOC662829"]
[909,"NC_007422.5",9211035,"SNV","T","A","Homozygous",25,25,100,1,9,18,0.33,37.68,27,27,11,12,null,1,1,"no","A/A","No",1,97.53,"XP_015837254.1:c.[118A>T]; XP_015837252.1:c.[53+7386A>T]","XP_015837254.1:p.Thr40Ser","LOC103313642, LOC107398264","103313642 , 107398264",null,"103313642 [Gene Symbol: LOC103313642] [Locus Tag: TcasGA2_TC008988] [Chromosome: LG7] [Map Location: ] [Description: homologous-pairing protein 2 homolog] [Gene Type: protein-coding] || 107398264 [Gene Symbol: LOC107398264] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: phospholipid scramblase 2-like] [Gene Type: protein-coding]","TcasGA2_TC008988; LOC103313642 || LOC107398264"]
[911,"NC_007422.5",9388094,"SNV","C","A","Heterozygous",10,20,50,1,2,8,0.2,36.1,10,20,5,4,-1.44,0.64,1,"no","A/C","No",1,79.53,"XP_008196036.1:c.[3098C>A]; XP_008196037.1:c.[3098C>A]","XP_008196036.1:p.[Ala1033Glu]; XP_008196037.1:p.[Ala1033Glu]","LOC103313737",103313737,null,"103313737 [Gene Symbol: LOC103313737] [Locus Tag: TcasGA2_TC008741] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313737] [Gene Type: protein-coding]","LOC103313737; TcasGA2_TC008741"]
[914,"NC_007422.5",9610824,"SNV","A","G","Heterozygous",9,22,40.91,1,6,4,0.4,36.89,10,27,6,5,-1.27,0.6,1,"no","A/G","No",1,68.05,"XP_008196062.1:c.1049A>G","XP_008196062.1:p.Gln350Arg","LOC103313746",103313746,null,"103313746 [Gene Symbol: LOC103313746] [Locus Tag: TcasGA2_TC008761] [Chromosome: LG7] [Map Location: ] [Description: vanin-like protein 1] [Gene Type: protein-coding]","LOC103313746; TcasGA2_TC008761"]
[915,"NC_007422.5","9615718..9615720","Deletion","GTG","-","Homozygous",25,25,100,1,17,17,0.5,35.76,34,34,12,23,null,1,1,"no","-/-","No",1,200,"XP_975679.2:c.812_814delCAC","XP_975679.2:p.Pro271del","LOC664590",664590,null,"664590 [Gene Symbol: LOC664590] [Locus Tag: TcasGA2_TC010061] [Chromosome: LG7] [Map Location: ] [Description: barentsz] [Gene Type: protein-coding]","Btz; LOC664590; TcasGA2_TC010061"]
[917,"NC_007422.5",9690891,"SNV","C","T","Heterozygous",8,21,38.1,1,1,7,0.12,37.88,8,23,4,4,0.51,0.33,0.23,"no","C/T","No",1,56.43,"XP_015837065.1:c.1399G>A","XP_015837065.1:p.Ala467Thr","LOC664580",664580,null,"664580 [Gene Symbol: LOC664580] [Locus Tag: TcasGA2_TC010054] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664580] [Gene Type: protein-coding]","LOC664580; TcasGA2_TC010054"]
[918,"NC_007422.5",9741158,"SNV","A","T","Heterozygous",12,29,41.38,1,8,8,0.5,38.58,16,33,6,7,-1.44,0.06,0.58,"no","A/T","No",1,85.38,"XP_015837080.1:c.[1085T>A]; XP_975665.2:c.[1082T>A]","XP_015837080.1:p.[Phe362Tyr]; XP_975665.2:p.[Phe361Tyr]","LOC664576",664576,null,"664576 [Gene Symbol: LOC664576] [Locus Tag: TcasGA2_TC010051] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","LOC664576; TcasGA2_TC010051"]
[919,"NC_007422.5",9741179,"SNV","G","A","Heterozygous",15,30,50,1,7,9,0.44,38.33,16,31,6,9,-2.7,0.21,0.48,"no","A/G","No",1,118.34,"XP_015837080.1:c.[1064C>T]; XP_975665.2:c.[1061C>T]","XP_015837080.1:p.[Ser355Phe]; XP_975665.2:p.[Ser354Phe]","LOC664576",664576,null,"664576 [Gene Symbol: LOC664576] [Locus Tag: TcasGA2_TC010051] [Chromosome: LG7] [Map Location: ] [Description: myrosinase 1] [Gene Type: protein-coding]","LOC664576; TcasGA2_TC010051"]
[921,"NC_007422.5",9836581,"SNV","G","A","Homozygous",20,20,100,1,15,7,0.32,37.5,22,22,12,15,null,1,1,"no","A/A","No",1,82.49,"XP_975649.1:c.338G>A","XP_975649.1:p.Ser113Asn","LOC664560",664560,null,"664560 [Gene Symbol: LOC664560] [Locus Tag: TcasGA2_TC008781] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase] [Gene Type: protein-coding]","LOC664560; TcasGA2_TC008781"]
[922,"NC_007422.5",9836841,"SNV","G","A","Homozygous",26,26,100,1,18,11,0.38,39.38,29,29,9,16,null,1,1,"no","A/A","No",1,100.54,"XP_975649.1:c.554G>A","XP_975649.1:p.Arg185Lys","LOC664560",664560,null,"664560 [Gene Symbol: LOC664560] [Locus Tag: TcasGA2_TC008781] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase] [Gene Type: protein-coding]","LOC664560; TcasGA2_TC008781"]
[923,"NC_007422.5",9837163,"SNV","G","T","Homozygous",20,20,100,1,5,20,0.2,36.55,25,25,6,5,null,1,1,"no","T/T","No",1,82.52,"XP_975649.1:c.876G>T","XP_975649.1:p.Leu292Phe","LOC664560",664560,null,"664560 [Gene Symbol: LOC664560] [Locus Tag: TcasGA2_TC008781] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase] [Gene Type: protein-coding]","LOC664560; TcasGA2_TC008781"]
[924,"NC_007422.5","9848887^9848888","Insertion","-","C","Heterozygous",8,21,38.1,1,5,6,0.45,38.25,11,31,3,6,1.34,0.09,0.9,"no","-/C","No",1,59.38,"XP_015837067.1:c.1192_1193insC","XP_015837067.1:p.Val399fs","LOC664550",664550,null,"664550 [Gene Symbol: LOC664550] [Locus Tag: TcasGA2_TC033817] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC664550] [Gene Type: protein-coding]","TcasGA2_TC033817; LOC664550"]
[926,"NC_007422.5",9900997,"SNV","T","C","Homozygous",32,32,100,1,19,20,0.49,37.88,39,39,10,13,null,1,1,"no","C/C","No",1,117,"XP_008195998.1:c.[824T>C]; XP_008195997.1:c.[824T>C]","XP_008195998.1:p.[Val275Ala]; XP_008195997.1:p.[Val275Ala]","LOC100141526",100141526,null,"100141526 [Gene Symbol: LOC100141526] [Locus Tag: TcasGA2_TC008788] [Chromosome: LG7] [Map Location: ] [Description: protein mothers against dpp] [Gene Type: protein-coding]","SMADx; LOC100141526; TcasGA2_TC008788"]
[927,"NC_007422.5",9954608,"SNV","G","T","Homozygous",23,23,100,1,9,18,0.33,37.91,27,27,13,15,null,1,1,"no","T/T","No",1,91.55,"XP_975608.1:c.766C>A","XP_975608.1:p.Gln256Lys","LOC664516",664516,null,"664516 [Gene Symbol: LOC664516] [Locus Tag: TcasGA2_TC010035] [Chromosome: LG7] [Map Location: ] [Description: glucosylceramidase] [Gene Type: protein-coding]","LOC664516; TcasGA2_TC010035"]
[928,"NC_007422.5",10080752,"SNV","T","C","Homozygous",23,23,100,1,12,15,0.44,37.96,27,27,14,10,null,1,1,"no","C/C","No",1,89.91,"XP_015837683.1:c.1321T>C","XP_015837683.1:p.Tyr441His","LOC664474",664474,null,"664474 [Gene Symbol: LOC664474] [Locus Tag: TcasGA2_TC008804] [Chromosome: LG7] [Map Location: ] [Description: UDP-glucuronosyltransferase 2B20] [Gene Type: protein-coding]","LOC664474; TcasGA2_TC008804"]
[929,"NC_007422.5",10082125,"SNV","G","A","Heterozygous",12,29,41.38,1,8,4,0.33,36.5,12,44,3,8,0.73,0.05,0.93,"no","A/G","No",1,87.97,"XP_008195974.1:c.[637G>A]; XP_008195975.1:c.[637G>A]","XP_008195974.1:p.[Ala213Thr]; XP_008195975.1:p.[Ala213Thr]","LOC103313721",103313721,null,"103313721 [Gene Symbol: LOC103313721] [Locus Tag: TcasGA2_TC033804] [Chromosome: LG7] [Map Location: ] [Description: macoilin-2-like] [Gene Type: protein-coding]","LOC103313721; TcasGA2_TC033804"]
[933,"NC_007422.5",10536122,"SNV","G","A","Heterozygous",10,22,45.45,1,6,4,0.4,39.9,10,25,3,5,2.93,0.03,1,"no","A/G","No",1,79.12,"XP_008195941.1:c.2092C>T","XP_008195941.1:p.Leu698Phe","LOC103313715",103313715,null,"103313715 [Gene Symbol: LOC103313715] [Locus Tag: TcasGA2_TC009999] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313715] [Gene Type: protein-coding]","TcasGA2_TC009999; LOC103313715"]
[935,"NC_007422.5",10742567,"SNV","G","T","Heterozygous",14,22,63.64,1,4,10,0.29,36.93,14,23,7,7,-0.34,0.9,1,"no","G/T","No",1,56.73,"XP_008195898.1:c.[1139G>T]; XP_008195897.1:c.[1139G>T]","XP_008195898.1:p.[Arg380Leu]; XP_008195897.1:p.[Arg380Leu]","LOC664307",664307,null,"664307 [Gene Symbol: LOC664307] [Locus Tag: TcasGA2_TC031208] [Chromosome: LG7] [Map Location: ] [Description: peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase] [Gene Type: protein-coding]","TcasGA2_TC031208; LOC664307"]
[937,"NC_007422.5",11286224,"SNV","G","A","Homozygous",21,21,100,1,7,15,0.32,37.81,22,22,9,10,null,1,1,"no","A/A","No",1,85.5,"XP_015837280.1:c.766G>A","XP_015837280.1:p.Val256Ile","LOC663974",663974,null,"663974 [Gene Symbol: LOC663974] [Locus Tag: TcasGA2_TC008879] [Chromosome: LG7] [Map Location: ] [Description: origin recognition complex subunit 1] [Gene Type: protein-coding]","LOC663974; TcasGA2_TC008879"]
[938,"NC_007422.5",11445086,"SNV","C","T","Homozygous",24,24,100,1,12,14,0.46,37.12,26,26,13,16,null,1,1,"no","T/T","No",1,91.55,"XP_974907.2:c.688G>A","XP_974907.2:p.Ala230Thr","LOC663779",663779,null,"663779 [Gene Symbol: LOC663779] [Locus Tag: TcasGA2_TC009947] [Chromosome: LG7] [Map Location: ] [Description: armadillo repeat-containing protein 6 homolog] [Gene Type: protein-coding]","TcasGA2_TC009947; LOC663779"]
[939,"NC_007422.5",11471336,"SNV","T","C","Homozygous",26,26,100,1,18,13,0.42,37.88,31,31,6,14,null,1,1,"no","C/C","No",1,98.94,"XP_015837215.1:c.[4517A>G]; XP_015837228.1:c.[4367A>G]; XP_015837226.1:c.[4418A>G]; XP_015837219.1:c.[4475A>G]; XP_008195842.1:c.[4412A>G]; XP_015837222.1:c.[4448A>G]; XP_015837220.1:c.[4460A>G]; XP_015837221.1:c.[4454A>G]; XP_015837229.1:c.[4337-343A>G]; XP_015837217.1:c.[4511A>G]; XP_008195841.1:c.[4469A>G]; XP_015837218.1:c.[4481A>G]; XP_015837227.1:c.[4403A>G]; XP_015837224.1:c.[4439A>G]; XP_015837223.1:c.[4445A>G]; XP_008195840.1:c.[4475A>G]","XP_015837215.1:p.[His1506Arg]; XP_015837228.1:p.[His1456Arg]; XP_015837226.1:p.[His1473Arg]; XP_015837219.1:p.[His1492Arg]; XP_008195842.1:p.[His1471Arg]; XP_015837222.1:p.[His1483Arg]; XP_015837220.1:p.[His1487Arg]; XP_015837221.1:p.[His1485Arg]; XP_015837217.1:p.[His1504Arg]; XP_008195841.1:p.[His1490Arg]; XP_015837218.1:p.[His1494Arg]; XP_015837227.1:p.[His1468Arg]; XP_015837224.1:p.[His1480Arg]; XP_015837223.1:p.[His1482Arg]; XP_008195840.1:p.[His1492Arg]","LOC663729",663729,null,"663729 [Gene Symbol: LOC663729] [Locus Tag: TcasGA2_TC009942] [Chromosome: LG7] [Map Location: ] [Description: transient receptor potential cation channel, subfamily M] [Gene Type: protein-coding]","TcasGA2_TC009942; GLEAN_09943; TRPM; LOC663729"]
[941,"NC_007422.5",11764855,"SNV","A","T","Homozygous",20,20,100,1,6,19,0.24,38.65,25,25,6,9,null,1,1,"no","T/T","No",1,82.52,"XP_008195808.1:c.1095T>A","XP_008195808.1:p.Asn365Lys","LOC663232",663232,null,"663232 [Gene Symbol: LOC663232] [Locus Tag: TcasGA2_TC009925] [Chromosome: LG7] [Map Location: ] [Description: rho GTPase-activating protein 11A] [Gene Type: protein-coding]","LOC663232; TcasGA2_TC009925"]
[943,"NC_007422.5",11897462,"SNV","G","A","Homozygous",30,30,100,1,11,23,0.32,35,34,34,13,21,null,1,1,"no","A/A","No",1,109.57,"XP_015837300.1:c.[3424C>T]; XP_008195801.1:c.[3424C>T]","XP_015837300.1:p.[Pro1142Ser]; XP_008195801.1:p.[Pro1142Ser]","LOC103313681",103313681,null,"103313681 [Gene Symbol: LOC103313681] [Locus Tag: TcasGA2_TC009918] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC103313681] [Gene Type: protein-coding]","LOC103313681; TcasGA2_TC009918"]
[944,"NC_007422.5",11910806,"SNV","A","G","Homozygous",22,22,100,1,12,10,0.45,39.09,22,22,6,14,null,1,1,"no","G/G","No",1,86.9,"XP_015837305.1:c.[1777A>G]; XP_008195796.1:c.[1777A>G]","XP_015837305.1:p.[Ile593Val]; XP_008195796.1:p.[Ile593Val]","LOC103313680",103313680,null,"103313680 [Gene Symbol: LOC103313680] [Locus Tag: TcasGA2_TC008920] [Chromosome: LG7] [Map Location: ] [Description: RNA polymerase II degradation factor 1] [Gene Type: protein-coding]","TcasGA2_TC008920; LOC103313680"]
[945,"NC_007422.5",11910963,"SNV","G","A","Heterozygous",15,21,71.43,1,6,10,0.38,39.16,16,22,6,14,null,0.73,0.97,"no","complex","No",1,200,"XP_008195796.1:c.[1934G>A]; XP_015837305.1:c.[1934G>A]","XP_008195796.1:p.[Gly645Asp]; XP_015837305.1:p.[Gly645Asp]","LOC103313680",103313680,null,"103313680 [Gene Symbol: LOC103313680] [Locus Tag: TcasGA2_TC008920] [Chromosome: LG7] [Map Location: ] [Description: RNA polymerase II degradation factor 1] [Gene Type: protein-coding]","TcasGA2_TC008920; LOC103313680"]
[946,"NC_007422.5","11910963..11910964","MNV","GT","AC","Heterozygous",6,21,28.57,1,1,5,0.17,37.52,6,22,1,2,null,0.17,0.66,"no","complex","No",1,200,"XP_015837305.1:c.[1934_1935delGTinsAC]; XP_008195796.1:c.[1934_1935delGTinsAC]","XP_015837305.1:p.[Gly645Asp]; XP_008195796.1:p.[Gly645Asp]","LOC103313680",103313680,null,"103313680 [Gene Symbol: LOC103313680] [Locus Tag: TcasGA2_TC008920] [Chromosome: LG7] [Map Location: ] [Description: RNA polymerase II degradation factor 1] [Gene Type: protein-coding]","TcasGA2_TC008920; LOC103313680"]
[947,"NC_007422.5",11950759,"SNV","A","G","Homozygous",22,22,100,1,4,21,0.16,37.23,25,25,6,8,null,1,1,"no","G/G","No",1,86.9,"XP_008195789.1:c.4927A>G","XP_008195789.1:p.Thr1643Ala","LOC662516",662516,null,"662516 [Gene Symbol: LOC662516] [Locus Tag: TcasGA2_TC008923] [Chromosome: LG7] [Map Location: ] [Description: myosin 22] [Gene Type: protein-coding]","TcasGA2_TC008923; LOC662516; Myo22"]
[951,"NC_007422.5",12875491,"SNV","T","C","Heterozygous",17,26,65.38,1,9,9,0.5,37.06,18,27,8,11,1.27,0.11,0.73,"no","C/T","No",1,55.3,"XP_008195718.1:c.[628A>G]; XP_015837687.1:c.[628A>G]","XP_008195718.1:p.[Thr210Ala]; XP_015837687.1:p.[Thr210Ala]","LOC657893",657893,null,"657893 [Gene Symbol: LOC657893] [Locus Tag: TcasGA2_TC009867] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC657893] [Gene Type: protein-coding]","TcasGA2_TC009867; LOC657893"]
[952,"NC_007422.5",13007392,"SNV","A","C","Homozygous",21,21,100,1,18,3,0.14,38.52,21,21,7,15,null,1,1,"no","C/C","No",1,83.89,"XP_969124.4:c.[78A>C]; XP_015837664.1:c.[42A>C]","XP_969124.4:p.[Arg26Ser]","LOC657579",657579,null,"657579 [Gene Symbol: LOC657579] [Locus Tag: TcasGA2_TC008981] [Chromosome: LG7] [Map Location: ] [Description: ATPase inhibitor, mitochondrial] [Gene Type: protein-coding]","LOC657579; TcasGA2_TC008981"]
[953,"NC_007422.5",13119932,"SNV","A","G","Heterozygous",9,21,42.86,1,5,5,0.5,38.44,10,22,4,5,1.24,0.33,1,"no","A/G","No",1,70.85,"XP_015837396.1:c.[4996T>C]; XP_015837404.1:c.[4963T>C]; XP_015837401.1:c.[4978T>C]; XP_015837397.1:c.[4993T>C]; XP_015837406.1:c.[4945T>C]; XP_015837410.1:c.[4147T>C]; XP_015837409.1:c.[4156T>C]; XP_015837400.1:c.[4987T>C]; XP_015837402.1:c.[4975T>C]; XP_015837399.1:c.[4990T>C]; XP_015837394.1:c.[5002T>C]; XP_015837403.1:c.[4975T>C]; XP_015837393.1:c.[5005T>C]; XP_015837408.1:c.[4198T>C]; XP_015837395.1:c.[4996T>C]; XP_015837398.1:c.[4990T>C]; XP_015837405.1:c.[4957T>C]","XP_015837396.1:p.[Ser1666Pro]; XP_015837404.1:p.[Ser1655Pro]; XP_015837401.1:p.[Ser1660Pro]; XP_015837397.1:p.[Ser1665Pro]; XP_015837406.1:p.[Ser1649Pro]; XP_015837410.1:p.[Ser1383Pro]; XP_015837409.1:p.[Ser1386Pro]; XP_015837400.1:p.[Ser1663Pro]; XP_015837402.1:p.[Ser1659Pro]; XP_015837399.1:p.[Ser1664Pro]; XP_015837394.1:p.[Ser1668Pro]; XP_015837403.1:p.[Ser1659Pro]; XP_015837393.1:p.[Ser1669Pro]; XP_015837408.1:p.[Ser1400Pro]; XP_015837395.1:p.[Ser1666Pro]; XP_015837398.1:p.[Ser1664Pro]; XP_015837405.1:p.[Ser1653Pro]","LOC663934",663934,null,"663934 [Gene Symbol: LOC663934] [Locus Tag: TcasGA2_TC010200] [Chromosome: LG7] [Map Location: ] [Description: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2] [Gene Type: protein-coding]","TcasGA2_TC010200; LOC663934"]
[956,"NC_007422.5",13198920,"SNV","T","C","Homozygous",21,21,100,1,10,11,0.48,38.71,21,21,10,15,null,1,1,"no","C/C","No",1,83.89,"XP_008196416.1:c.5781A>G","XP_008196416.1:p.Ile1927Met","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[958,"NC_007422.5",13203978,"SNV","G","C","Heterozygous",8,22,36.36,1,8,0,0,37,8,22,4,4,-0.65,0.44,0.42,"no","C/G","No",1,54.37,"XP_008196416.1:c.1325C>G","XP_008196416.1:p.Pro442Arg","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[959,"NC_007422.5",13203987,"SNV","A","G","Heterozygous",10,23,43.48,1,9,1,0.1,37.7,10,23,5,6,-0.65,0.38,0.58,"no","A/G","No",1,78.06,"XP_008196416.1:c.1316T>C","XP_008196416.1:p.Leu439Pro","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[960,"NC_007422.5",13203999,"SNV","C","T","Heterozygous",9,20,45,1,7,2,0.22,35.22,9,20,4,6,-3.46,0.84,0.78,"no","C/T","No",1,72.08,"XP_008196416.1:c.1304G>A","XP_008196416.1:p.Trp435*","LOC663822",663822,null,"663822 [Gene Symbol: LOC663822] [Locus Tag: TcasGA2_TC010195] [Chromosome: LG7] [Map Location: ] [Description: papilin] [Gene Type: protein-coding]","LOC663822; TcasGA2_TC010195"]
[961,"NC_007422.5",13644220,"SNV","C","T","Homozygous",23,23,100,1,12,13,0.48,35.7,25,25,8,12,null,1,1,"no","T/T","No",1,91.55,"XP_974442.1:c.[913G>A]; XP_008196394.1:c.[1865+1453C>T]","XP_974442.1:p.Glu305Lys","LOC663273, LOC663293","663273 , 663293",null,"663273 [Gene Symbol: LOC663273] [Locus Tag: TcasGA2_TC008647] [Chromosome: LG7] [Map Location: ] [Description: tyrosine-protein kinase hopscotch] [Gene Type: protein-coding] || 663293 [Gene Symbol: LOC663293] [Locus Tag: TcasGA2_TC010172] [Chromosome: LG7] [Map Location: ] [Description: heat shock protein 70 A1] [Gene Type: protein-coding]","hopscotch; Hop; LOC663273; TcasGA2_TC008647 || TcasGA2_TC010172; LOC663293"]
[962,"NC_007422.5",13654045,"SNV","G","C","Homozygous",22,22,100,1,6,17,0.26,36.95,23,23,13,12,null,1,1,"no","C/C","No",1,86.9,"XP_008196389.1:c.2237C>G","XP_008196389.1:p.Thr746Ser","LOC663208",663208,null,"663208 [Gene Symbol: LOC663208] [Locus Tag: TcasGA2_TC033847] [Chromosome: LG7] [Map Location: ] [Description: beta-mannosidase-like] [Gene Type: protein-coding]","TcasGA2_TC033847; LOC663208"]
[964,"NC_007422.5",13711671,"SNV","A","G","Homozygous",21,21,100,1,7,14,0.33,37.48,21,21,10,10,null,1,1,"no","G/G","No",1,83.89,"XP_015837075.1:c.[2200-42A>G]; XP_015837475.1:c.[223T>C]","XP_015837475.1:p.Ser75Pro","LOC662737, LOC107398307","662737 , 107398307",null,"662737 [Gene Symbol: LOC662737] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC662737] [Gene Type: protein-coding] || 107398307 [Gene Symbol: LOC107398307] [Locus Tag: TcasGA2_TC033850] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398307] [Gene Type: protein-coding]","LOC662737 || LOC107398307; TcasGA2_TC033850"]
[966,"NC_007422.5",13824258,"SNV","G","A","Homozygous",25,25,100,1,11,21,0.34,36.2,32,32,11,14,null,1,1,"no","A/A","No",1,97.54,"XP_015837123.1:c.1165C>T","XP_015837123.1:p.His389Tyr","LOC662160, LOC662089","662160 , 662089",null,"662160 [Gene Symbol: LOC662160] [Locus Tag: TcasGA2_TC008670] [Chromosome: LG7] [Map Location: ] [Description: TIMELESS-interacting protein] [Gene Type: protein-coding] || 662089 [Gene Symbol: LOC662089] [Locus Tag: TcasGA2_TC010158] [Chromosome: LG7] [Map Location: ] [Description: facilitated trehalose transporter Tret1-2 homolog] [Gene Type: protein-coding]","LOC662160; TcasGA2_TC008670 || TcasGA2_TC010158; LOC662089"]
[968,"NC_007422.5",13924221,"SNV","G","A","Homozygous",23,23,100,1,11,14,0.44,36.91,25,25,11,12,null,1,1,"no","A/A","No",1,91.52,"XP_008196345.1:c.250G>A","XP_008196345.1:p.Val84Ile","LOC661730",661730,null,"661730 [Gene Symbol: LOC661730] [Locus Tag: TcasGA2_TC008673] [Chromosome: LG7] [Map Location: ] [Description: dipeptidyl peptidase 3] [Gene Type: protein-coding]","LOC661730; TcasGA2_TC008673"]
[969,"NC_007422.5",13926622,"SNV","G","A","Homozygous",25,25,100,1,12,13,0.48,36.88,25,25,12,15,null,1,1,"no","A/A","No",1,97.54,"XP_008196345.1:c.2003G>A","XP_008196345.1:p.Gly668Glu","LOC661730",661730,null,"661730 [Gene Symbol: LOC661730] [Locus Tag: TcasGA2_TC008673] [Chromosome: LG7] [Map Location: ] [Description: dipeptidyl peptidase 3] [Gene Type: protein-coding]","LOC661730; TcasGA2_TC008673"]
[970,"NC_007422.5",13937119,"SNV","G","A","Homozygous",20,20,100,1,4,16,0.2,36.95,20,20,8,9,null,1,1,"no","A/A","No",1,82.49,"XP_008196342.2:c.[869C>T]; XP_015837439.1:c.[1121C>T]","XP_008196342.2:p.[Thr290Met]; XP_015837439.1:p.[Thr374Met]","LOC661511",661511,null,"661511 [Gene Symbol: LOC661511] [Locus Tag: TcasGA2_TC010152] [Chromosome: LG7] [Map Location: ] [Description: UDP-glucuronosyltransferase 1-9] [Gene Type: protein-coding]","TcasGA2_TC010152; LOC661511"]
[971,"NC_007422.5",13953393,"SNV","C","T","Homozygous",25,25,100,1,12,17,0.41,38.48,29,29,11,16,null,1,1,"no","T/T","No",1,97.56,"XP_008196340.1:c.1288G>A","XP_008196340.1:p.Val430Met","LOC661106",661106,null,"661106 [Gene Symbol: LOC661106] [Locus Tag: TcasGA2_TC010150] [Chromosome: LG7] [Map Location: ] [Description: bromodomain-containing protein 8] [Gene Type: protein-coding]","TcasGA2_TC010150; LOC661106"]
[973,"NC_007422.5",14033230,"SNV","T","A","Homozygous",24,24,100,1,19,12,0.39,38.08,31,31,11,15,null,1,1,"no","A/A","No",1,94.52,"XP_972129.2:c.374A>T","XP_972129.2:p.Tyr125Phe","LOC660833",660833,null,"660833 [Gene Symbol: LOC660833] [Locus Tag: TcasGA2_TC030761] [Chromosome: LG7] [Map Location: ] [Description: fukutin-related protein] [Gene Type: protein-coding]","LOC660833; TcasGA2_TC030761"]
[974,"NC_007422.5",14165159,"SNV","C","A","Homozygous",21,21,100,1,19,3,0.14,38.95,22,22,7,14,null,1,1,"no","A/A","No",1,85.49,"XP_008196326.1:c.[1495C>A]; XP_008196325.1:c.[1501C>A]","XP_008196326.1:p.[Pro499Thr]; XP_008196325.1:p.[Pro501Thr]","LOC660367",660367,null,"660367 [Gene Symbol: LOC660367] [Locus Tag: TcasGA2_TC008693] [Chromosome: LG7] [Map Location: ] [Description: AT-rich interactive domain-containing protein 4B] [Gene Type: protein-coding]","LOC660367; TcasGA2_TC008693"]
[977,"NC_007422.5",16294735,"Deletion","T","-","Heterozygous",15,24,62.5,1,10,13,0.43,36.27,23,32,8,11,-1.88,0.82,0.84,"no","-/T","Yes",3,63.33,"XP_015837697.1:c.36delT","XP_015837697.1:p.Phe13fs","LOC107398359",107398359,null,"107398359 [Gene Symbol: LOC107398359] [Locus Tag: TcasGA2_TC033891] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398359] [Gene Type: protein-coding]","TcasGA2_TC033891; LOC107398359"]
[978,"NC_007422.5",16294749,"SNV","A","G","Heterozygous",9,23,39.13,1,0,9,0,40.11,9,28,5,4,1.42,0.35,0.4,"no","A/G","No",1,65.27,"XP_015837697.1:c.50A>G","XP_015837697.1:p.Glu17Gly","LOC107398359",107398359,null,"107398359 [Gene Symbol: LOC107398359] [Locus Tag: TcasGA2_TC033891] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398359] [Gene Type: protein-coding]","TcasGA2_TC033891; LOC107398359"]
[980,"NC_007422.5",16365032,"SNV","T","A","Heterozygous",11,20,55,1,10,4,0.29,39,14,26,5,6,1.67,0.48,1,"no","A/T","No",1,72.11,"XP_015837699.1:c.528T>A","XP_015837699.1:p.His176Gln","LOC107398360",107398360,null,"107398360 [Gene Symbol: LOC107398360] [Locus Tag: TcasGA2_TC033894] [Chromosome: LG7] [Map Location: ] [Description: uncharacterized LOC107398360] [Gene Type: protein-coding]","TcasGA2_TC033894; LOC107398360"]
[982,"NC_007422.5","16448187..16448188","MNV","GG","CA","Heterozygous",8,22,36.36,1,3,7,0.3,36.94,10,24,3,5,1.37,0.43,0.98,"no","complex","No",1,200,"XP_015837727.1:c.309_310delGGinsCA","XP_015837727.1:p.Lys103_Asp104delinsAsnAsn","LOC103314016",103314016,null,"103314016 [Gene Symbol: LOC103314016] [Locus Tag: ] [Chromosome: LG7] [Map Location: ] [Description: probable serine/threonine-protein kinase clkA] [Gene Type: protein-coding]","LOC103314016"]
[984,"NC_007423.3",168763,"SNV","G","C","Homozygous",24,24,100,1,17,8,0.32,36.79,25,25,7,17,null,1,1,"no","C/C","No",1,92.92,"XP_966433.1:c.256C>G","XP_966433.1:p.Arg86Gly","LOC655245",655245,null,"655245 [Gene Symbol: LOC655245] [Locus Tag: TcasGA2_TC015978] [Chromosome: LG8] [Map Location: ] [Description: aldehyde dehydrogenase, dimeric NADP-preferring] [Gene Type: protein-coding]","LOC655245; TcasGA2_TC015978"]
[990,"NC_007423.3",657928,"SNV","G","A","Homozygous",20,20,100,1,13,13,0.5,38.9,26,26,11,11,null,1,1,"no","A/A","No",1,82.49,"XP_008199200.1:c.[554C>T]; XP_008199201.1:c.[344C>T]; XP_015837930.1:c.[554C>T]","XP_008199200.1:p.[Ser185Phe]; XP_008199201.1:p.[Ser115Phe]; XP_015837930.1:p.[Ser185Phe]","LOC103314575",103314575,null,"103314575 [Gene Symbol: LOC103314575] [Locus Tag: TcasGA2_TC033920] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314575] [Gene Type: protein-coding]","TcasGA2_TC033920; LOC103314575"]
[991,"NC_007423.3",801436,"SNV","G","A","Heterozygous",9,27,33.33,1,8,8,0.5,39,16,36,6,8,1.65,0.4,0.91,"no","A/G","No",1,52.48,"XP_008199215.1:c.377G>A","XP_008199215.1:p.Gly126Glu","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[993,"NC_007423.3","802172^802173","Insertion","-","ATTGCC","Homozygous",37,37,100,1,29,18,0.38,38.26,47,47,18,27,null,1,1,"no","ATTGCC/ATTGCC","No",1,200,"XP_008199215.1:c.984_985insATTGCC","XP_008199215.1:p.Tyr328_Met329insIleAla","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[994,"NC_007423.3",802257,"SNV","G","A","Heterozygous",13,34,38.24,1,6,13,0.32,39.46,19,49,9,6,2.55,0.39,0.72,"no","A/G","No",1,83.9,"XP_008199215.1:c.1069G>A","XP_008199215.1:p.Glu357Lys","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[995,"NC_007423.3",802276,"SNV","T","A","Heterozygous",25,37,67.57,1,18,16,0.47,38.12,34,49,16,14,-3.15,0.97,0.96,"no","A/T","No",1,63.06,"XP_008199215.1:c.1088T>A","XP_008199215.1:p.Phe363Tyr","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[996,"NC_007423.3",802323,"SNV","A","G","Heterozygous",18,27,66.67,1,9,13,0.41,38.56,22,31,14,11,0.49,1,0.95,"no","A/G","No",1,52.52,"XP_008199215.1:c.1135A>G","XP_008199215.1:p.Ile379Val","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[998,"NC_007423.3",802593,"SNV","T","C","Homozygous",21,22,95.45,1,5,16,0.24,37.9,21,22,11,14,null,0.99,1,"no","C/C","No",1,54.82,"XP_008199215.1:c.1405T>C","XP_008199215.1:p.Tyr469His","LOC656546",656546,null,"656546 [Gene Symbol: LOC656546] [Locus Tag: TcasGA2_TC002209] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC656546] [Gene Type: protein-coding]","TcasGA2_TC002209; LOC656546"]
[1000,"NC_007423.3",2369496,"SNV","G","A","Heterozygous",9,21,42.86,1,6,5,0.45,37.44,11,23,5,6,-0.04,0.96,0.99,"no","A/G","No",1,69.23,"XP_008196097.1:c.88G>A","XP_008196097.1:p.Gly30Ser","LOC655617",655617,null,"655617 [Gene Symbol: LOC655617] [Locus Tag: TcasGA2_TC006094] [Chromosome: LG8] [Map Location: ] [Description: peregrin] [Gene Type: protein-coding]","TcasGA2_TC006094; LOC655617"]
[1002,"NC_007423.3",2425691,"SNV","G","C","Heterozygous",22,32,68.75,1,15,9,0.38,37.82,24,35,5,19,2.5,0.8,1,"no","C/G","No",1,51.76,"XP_008196103.1:c.[4000C>G]; XP_008196102.1:c.[4000C>G]; XP_015837773.1:c.[4093C>G]","XP_008196103.1:p.[His1334Asp]; XP_008196102.1:p.[His1334Asp]; XP_015837773.1:p.[His1365Asp]","LOC656615",656615,null,"656615 [Gene Symbol: LOC656615] [Locus Tag: TcasGA2_TC006051] [Chromosome: LG8] [Map Location: ] [Description: GTPase-activating protein CdGAPr] [Gene Type: protein-coding]","TcasGA2_TC006051; LOC656615"]
[1003,"NC_007423.3","2426344^2426345","Insertion","-","CTCCTC","Heterozygous",10,26,38.46,1,8,2,0.2,36.93,10,27,4,5,-2.3,0.44,0.73,"no","complex","No",1,200,"XP_008196102.1:c.[3393_3394insGAGGAG]; XP_008196103.1:c.[3393_3394insGAGGAG]; XP_015837773.1:c.[3486_3487insGAGGAG]","XP_008196102.1:p.[Glu1131_Asn1132insGluGlu]; XP_008196103.1:p.[Glu1131_Asn1132insGluGlu]; XP_015837773.1:p.[Glu1162_Asn1163insGluGlu]","LOC656615",656615,null,"656615 [Gene Symbol: LOC656615] [Locus Tag: TcasGA2_TC006051] [Chromosome: LG8] [Map Location: ] [Description: GTPase-activating protein CdGAPr] [Gene Type: protein-coding]","TcasGA2_TC006051; LOC656615"]
[1004,"NC_007423.3","2440610..2440611","MNV","GG","TC","Homozygous",22,24,91.67,1,13,9,0.41,36.82,22,25,8,16,null,1,1,"no","TC/TC","No",1,200,"XP_015837773.1:c.[1196+2983_1196+2984delCCinsGA]; XP_008196102.1:c.[1103+2983_1103+2984delCCinsGA]; XP_008196103.1:c.[1103+2983_1103+2984delCCinsGA]; NP_001161929.1:c.[3569_3570delGGinsTC]","NP_001161929.1:p.Trp1190Phe","LOC656615, Pmp14","656615 , 100313959","peritrophic matrix protein 14","656615 [Gene Symbol: LOC656615] [Locus Tag: TcasGA2_TC006051] [Chromosome: LG8] [Map Location: ] [Description: GTPase-activating protein CdGAPr] [Gene Type: protein-coding] || 100313959 [Gene Symbol: Pmp14] [Locus Tag: TcasGA2_TC033952] [Chromosome: LG8] [Map Location: ] [Description: peritrophic matrix protein 14] [Gene Type: protein-coding]","TcasGA2_TC006051; LOC656615 || Pmp14; TcasGA2_TC033952"]
[1007,"NC_007423.3",2486845,"SNV","G","A","Homozygous",23,23,100,1,14,15,0.48,37.09,29,29,11,18,null,1,1,"no","A/A","No",1,91.52,"XP_015837793.1:c.5560C>T","XP_015837793.1:p.Gln1854*","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1008,"NC_007423.3",2487802,"SNV","C","T","Heterozygous",11,20,55,1,8,6,0.43,38.18,14,27,5,8,0.95,0.82,1,"no","C/T","No",1,73.62,"XP_015837793.1:c.4753G>A","XP_015837793.1:p.Glu1585Lys","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1009,"NC_007423.3",2488558,"SNV","C","T","Heterozygous",15,23,65.22,1,12,10,0.45,35.93,22,30,6,10,-2.81,0.8,1,"no","C/T","No",1,52.57,"XP_015837793.1:c.3997G>A","XP_015837793.1:p.Asp1333Asn","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1011,"NC_007423.3",2492268,"SNV","G","T","Heterozygous",12,25,48,1,6,6,0.5,39.67,12,28,4,5,1.01,0.9,1,"no","G/T","No",1,91.56,"XP_015837793.1:c.2672C>A","XP_015837793.1:p.Pro891Gln","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1012,"NC_007423.3",2492326,"SNV","T","C","Homozygous",25,25,100,1,25,4,0.14,36.68,29,29,9,14,null,1,1,"no","C/C","No",1,95.93,"XP_015837793.1:c.2614A>G","XP_015837793.1:p.Lys872Glu","LOC103313773",103313773,null,"103313773 [Gene Symbol: LOC103313773] [Locus Tag: TcasGA2_TC006046] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313773] [Gene Type: protein-coding]","LOC103313773; TcasGA2_TC006046"]
[1015,"NC_007423.3",2544349,"SNV","A","G","Homozygous",24,24,100,1,18,16,0.47,35.33,34,34,9,15,null,1,1,"no","G/G","No",1,92.92,"XP_008196116.1:c.197T>C","XP_008196116.1:p.Ile66Thr","LOC658295",658295,null,"658295 [Gene Symbol: LOC658295] [Locus Tag: TcasGA2_TC006042] [Chromosome: LG8] [Map Location: ] [Description: histone-lysine N-methyltransferase eggless] [Gene Type: protein-coding]","LOC658295; TcasGA2_TC006042"]
[1016,"NC_007423.3",2544403,"SNV","C","G","Homozygous",21,21,100,1,11,12,0.48,37.67,23,23,8,15,null,1,1,"no","G/G","No",1,83.89,"XP_008196116.1:c.143G>C","XP_008196116.1:p.Gly48Ala","LOC658295",658295,null,"658295 [Gene Symbol: LOC658295] [Locus Tag: TcasGA2_TC006042] [Chromosome: LG8] [Map Location: ] [Description: histone-lysine N-methyltransferase eggless] [Gene Type: protein-coding]","LOC658295; TcasGA2_TC006042"]
[1018,"NC_007423.3",2614240,"SNV","A","G","Homozygous",21,21,100,1,5,16,0.24,38.14,21,21,8,11,null,1,1,"no","G/G","No",1,83.88,"XP_008196134.1:c.[337A>G]; XP_970743.2:c.[337A>G]","XP_008196134.1:p.[Ser113Gly]; XP_970743.2:p.[Ser113Gly]","LOC659333",659333,null,"659333 [Gene Symbol: LOC659333] [Locus Tag: TcasGA2_TC033954] [Chromosome: LG8] [Map Location: ] [Description: TRAF-type zinc finger domain-containing protein 1-like] [Gene Type: protein-coding]","LOC659333; TcasGA2_TC033954"]
[1019,"NC_007423.3","2703260..2703261","MNV","TC","AT","Heterozygous",8,21,38.1,1,1,8,0.11,38.5,9,22,3,6,2.47,0.21,0.61,"no","complex","No",1,200,"XP_015837934.1:c.[455_456delTCinsAT]; XP_001812549.1:c.[455_456delTCinsAT]","XP_015837934.1:p.[Val152Asp]; XP_001812549.1:p.[Val152Asp]","LOC100141869",100141869,null,"100141869 [Gene Symbol: LOC100141869] [Locus Tag: TcasGA2_TC006120] [Chromosome: LG8] [Map Location: ] [Description: putative fatty acyl-CoA reductase CG5065] [Gene Type: protein-coding]","TcasGA2_TC006120; LOC100141869"]
[1020,"NC_007423.3",2832959,"SNV","C","A","Heterozygous",27,42,64.29,1,22,13,0.37,36.33,35,52,11,15,-2.74,0.29,0.99,"no","A/C","No",1,90.8,"XP_971924.1:c.92G>T","XP_971924.1:p.Arg31Leu","LOC660615",660615,null,"660615 [Gene Symbol: LOC660615] [Locus Tag: TcasGA2_TC006028] [Chromosome: LG8] [Map Location: ] [Description: alpha-ketoglutarate-dependent dioxygenase alkB homolog 4] [Gene Type: protein-coding]","LOC660615; TcasGA2_TC006028"]
[1023,"NC_007423.3",2889285,"SNV","T","C","Homozygous",21,21,100,1,0,21,0,37.33,21,21,4,9,null,1,1,"no","C/C","No",1,83.89,"XP_008196161.1:c.1882A>G","XP_008196161.1:p.Ser628Gly","LOC103313779",103313779,null,"103313779 [Gene Symbol: LOC103313779] [Locus Tag: TcasGA2_TC006021] [Chromosome: LG8] [Map Location: ] [Description: nuclear receptor corepressor 1] [Gene Type: protein-coding]","TcasGA2_TC006021; LOC103313779"]
[1026,"NC_007423.3",2918605,"SNV","T","A","Homozygous",29,29,100,1,16,22,0.42,35.66,38,38,9,14,null,1,1,"no","A/A","No",1,109.57,"XP_001813387.1:c.1427A>T","XP_001813387.1:p.Lys476Met","LOC100141949",100141949,null,"100141949 [Gene Symbol: LOC100141949] [Locus Tag: TcasGA2_TC006020] [Chromosome: LG8] [Map Location: ] [Description: Meckel syndrome type 1 protein] [Gene Type: protein-coding]","LOC100141949; TcasGA2_TC006020"]
[1027,"NC_007423.3",3680568,"SNV","G","A","Heterozygous",11,32,34.38,1,7,10,0.41,37.27,17,40,7,6,-2.42,0.38,0.99,"no","A/G","No",1,64.05,"XP_015837947.1:c.[629G>A]; XP_015837946.1:c.[629G>A]; XP_015837948.1:c.[629G>A]","XP_015837947.1:p.[Gly210Glu]; XP_015837946.1:p.[Gly210Glu]; XP_015837948.1:p.[Gly210Glu]","LOC107398426",107398426,null,"107398426 [Gene Symbol: LOC107398426] [Locus Tag: TcasGA2_TC006145] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398426] [Gene Type: protein-coding]","LOC107398426; TcasGA2_TC006145"]
[1029,"NC_007423.3",3890367,"SNV","G","C","Heterozygous",15,24,62.5,1,10,13,0.43,40.13,23,32,10,12,0.36,0.65,0.94,"no","C/G","No",1,61.3,"XP_015837876.1:c.232G>C","XP_015837876.1:p.Gly78Arg","LOC662131, LOC103313760","662131 , 103313760",null,"662131 [Gene Symbol: LOC662131] [Locus Tag: TcasGA2_TC006154] [Chromosome: LG8] [Map Location: ] [Description: toll-like receptor 2] [Gene Type: protein-coding] || 103313760 [Gene Symbol: LOC103313760] [Locus Tag: TcasGA2_TC006153] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313760] [Gene Type: protein-coding]","TcasGA2_TC006154; LOC662131 || LOC103313760; TcasGA2_TC006153"]
[1031,"NC_007423.3",4182059,"SNV","T","C","Heterozygous",12,24,50,1,0,12,0,39.17,12,26,4,6,0.49,0.14,0.2,"no","C/T","No",1,96.85,"XP_973827.2:c.140A>G","XP_973827.2:p.Lys47Arg","LOC662650",662650,null,"662650 [Gene Symbol: LOC662650] [Locus Tag: TcasGA2_TC005986] [Chromosome: LG8] [Map Location: ] [Description: isoaspartyl peptidase/L-asparaginase] [Gene Type: protein-coding]","LOC662650; TcasGA2_TC005986"]
[1032,"NC_007423.3",4220091,"SNV","T","C","Homozygous",20,20,100,1,9,14,0.39,35.9,23,23,10,14,null,1,1,"no","C/C","No",1,80.88,"XP_974107.1:c.562T>C","XP_974107.1:p.Ser188Pro","LOC662946",662946,null,"662946 [Gene Symbol: LOC662946] [Locus Tag: TcasGA2_TC006168] [Chromosome: LG8] [Map Location: ] [Description: transcription factor A, mitochondrial] [Gene Type: protein-coding]","LOC662946; TcasGA2_TC006168"]
[1033,"NC_007423.3",4634704,"SNV","T","A","Heterozygous",11,24,45.83,1,3,8,0.27,37.55,11,24,2,7,-0.2,0.61,0.67,"no","A/T","No",1,86.46,"XP_008201667.1:c.[2923A>T]; XP_008201669.1:c.[2890A>T]; XP_015837891.1:c.[2881A>T]; XP_015837892.1:c.[2770A>T]; XP_008201666.1:c.[2926A>T]; XP_008201670.1:c.[2845A>T]","XP_008201667.1:p.[Ser975Cys]; XP_008201669.1:p.[Ser964Cys]; XP_015837891.1:p.[Ser961Cys]; XP_015837892.1:p.[Ser924Cys]; XP_008201666.1:p.[Ser976Cys]; XP_008201670.1:p.[Ser949Cys]","LOC655697",655697,null,"655697 [Gene Symbol: LOC655697] [Locus Tag: TcasGA2_TC005963] [Chromosome: LG8] [Map Location: ] [Description: autism susceptibility gene 2 protein] [Gene Type: protein-coding]","TcasGA2_TC005963; LOC655697"]
[1035,"NC_007423.3",4842035,"SNV","C","A","Homozygous",25,25,100,1,15,10,0.4,37.6,25,25,10,15,null,1,1,"no","A/A","No",1,97.53,"XP_008196464.1:c.305C>A","XP_008196464.1:p.Thr102Lys","LOC103313865",103313865,null,"103313865 [Gene Symbol: LOC103313865] [Locus Tag: TcasGA2_TC006197] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006197; LOC103313865"]
[1036,"NC_007423.3",5418669,"SNV","A","G","Homozygous",20,20,100,1,9,11,0.45,39.8,20,20,7,12,null,1,1,"no","G/G","No",1,80.88,"XP_001812465.1:c.286T>C","XP_001812465.1:p.Ser96Pro","LOC100142121",100142121,null,"100142121 [Gene Symbol: LOC100142121] [Locus Tag: TcasGA2_TC005930] [Chromosome: LG8] [Map Location: ] [Description: ribosomal L1 domain-containing protein 1] [Gene Type: protein-coding]","LOC100142121; TcasGA2_TC005930"]
[1037,"NC_007423.3",5539806,"SNV","T","C","Heterozygous",12,24,50,1,9,3,0.25,37.83,12,27,3,8,-0.78,0.25,0.68,"no","C/T","No",1,96.87,"XP_972682.1:c.[464A>G]; XP_008196503.1:c.[461A>G]","XP_972682.1:p.[Lys155Arg]; XP_008196503.1:p.[Lys154Arg]","LOC661432",661432,null,"661432 [Gene Symbol: LOC661432] [Locus Tag: TcasGA2_TC005921] [Chromosome: LG8] [Map Location: ] [Description: enkurin domain-containing protein 1] [Gene Type: protein-coding]","LOC661432; TcasGA2_TC005921"]
[1038,"NC_007423.3",5666232,"SNV","G","C","Heterozygous",9,24,37.5,1,6,3,0.33,38.11,9,25,5,6,0.3,0.25,0.29,"no","C/G","No",1,61.58,"XP_015837868.1:c.[368C>G]; XP_015837865.1:c.[197-54706G>C]; XP_015837867.1:c.[368C>G]; XP_015837866.1:c.[197-54706G>C]","XP_015837868.1:p.[Thr123Ser]; XP_015837867.1:p.[Thr123Ser]","LOC103313893, LOC107398410","103313893 , 107398410",null,"103313893 [Gene Symbol: LOC103313893] [Locus Tag: TcasGA2_TC006244] [Chromosome: LG8] [Map Location: ] [Description: TWiK family of potassium channels protein 7] [Gene Type: protein-coding] || 107398410 [Gene Symbol: LOC107398410] [Locus Tag: TcasGA2_TC005912] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398410] [Gene Type: protein-coding]","LOC103313893; TcasGA2_TC006244 || TcasGA2_TC005912; LOC107398410"]
[1040,"NC_007423.3",5777400,"SNV","T","C","Homozygous",21,21,100,1,13,12,0.48,37.14,25,25,9,16,null,1,1,"no","C/C","No",1,83.89,"XP_008196580.1:c.253A>G","XP_008196580.1:p.Asn85Asp","LOC662132",662132,null,"662132 [Gene Symbol: LOC662132] [Locus Tag: TcasGA2_TC005906] [Chromosome: LG8] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC662132; TcasGA2_TC005906"]
[1041,"NC_007423.3",5817707,"SNV","T","C","Heterozygous",13,22,59.09,1,10,3,0.23,36.23,13,22,5,9,-0.97,0.66,1,"no","C/T","No",1,66.46,"XP_973543.1:c.[112A>G]; XP_008196537.1:c.[112A>G]","XP_973543.1:p.[Ser38Gly]; XP_008196537.1:p.[Ser38Gly]","LOC662349",662349,null,"662349 [Gene Symbol: LOC662349] [Locus Tag: TcasGA2_TC005902] [Chromosome: LG8] [Map Location: ] [Description: polypeptide N-acetylgalactosaminyltransferase 5] [Gene Type: protein-coding]","LOC662349; TcasGA2_TC005902"]
[1043,"NC_007423.3",5987419,"SNV","T","C","Heterozygous",6,25,24,1,0,6,0,35,6,27,1,3,-2.67,0.05,0.32,"no","complex","No",1,156.54,"XP_008196607.1:c.[470A>G]; XP_008196608.1:c.[470A>G]; XP_015837981.1:c.[563A>G]","XP_008196607.1:p.[Glu157Gly]; XP_008196608.1:p.[Glu157Gly]; XP_015837981.1:p.[Glu188Gly]","LOC655787",655787,null,"655787 [Gene Symbol: LOC655787] [Locus Tag: TcasGA2_TC005889] [Chromosome: LG8] [Map Location: ] [Description: nitrogen permease regulator 2-like protein] [Gene Type: protein-coding]","LOC655787; TcasGA2_TC005889"]
[1044,"NC_007423.3",5992866,"SNV","T","G","Heterozygous",16,26,61.54,1,6,10,0.38,37.94,16,28,5,8,1.11,0.73,0.96,"no","G/T","No",1,63.34,"XP_008196612.1:c.235A>C","XP_008196612.1:p.Asn79His","LOC103313906",103313906,null,"103313906 [Gene Symbol: LOC103313906] [Locus Tag: TcasGA2_TC005888] [Chromosome: LG8] [Map Location: ] [Description: zinc finger protein 513] [Gene Type: protein-coding]","LOC103313906; TcasGA2_TC005888"]
[1045,"NC_007423.3","6036175..6036176","MNV","TA","CG","Heterozygous",9,22,40.91,1,0,9,0,39.67,9,23,3,5,1.38,0.03,0.03,"no","complex","No",1,200,"XP_008196614.1:c.441_442delTAinsCG","XP_008196614.1:p.Ile148Val","LOC100142503",100142503,null,"100142503 [Gene Symbol: LOC100142503] [Locus Tag: TcasGA2_TC005883] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase subunit gamma-2, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC005883; LOC100142503"]
[1048,"NC_007423.3",6049921,"SNV","C","T","Heterozygous",17,30,56.67,1,11,6,0.35,35.65,17,30,5,9,-0.61,0.86,0.67,"no","C/T","No",1,96.91,"XP_015837997.1:c.[1501G>A]; XP_015837996.1:c.[1570G>A]","XP_015837997.1:p.[Val501Ile]; XP_015837996.1:p.[Val524Ile]","LOC657204",657204,null,"657204 [Gene Symbol: LOC657204] [Locus Tag: TcasGA2_TC005880] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657204] [Gene Type: protein-coding]","TcasGA2_TC005880; LOC657204"]
[1049,"NC_007423.3",6049927,"SNV","T","C","Heterozygous",17,29,58.62,1,11,10,0.48,35.82,21,33,7,8,1.08,0.45,0.64,"no","C/T","No",1,85.21,"XP_015837996.1:c.[1564A>G]; XP_015837997.1:c.[1495A>G]","XP_015837996.1:p.[Asn522Asp]; XP_015837997.1:p.[Asn499Asp]","LOC657204",657204,null,"657204 [Gene Symbol: LOC657204] [Locus Tag: TcasGA2_TC005880] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC657204] [Gene Type: protein-coding]","TcasGA2_TC005880; LOC657204"]
[1051,"NC_007423.3",6061078,"SNV","A","G","Homozygous",24,24,100,1,16,12,0.43,37.17,28,28,10,17,null,1,1,"no","G/G","No",1,92.91,"XP_008196618.1:c.[668A>G]; XP_015837998.1:c.[482A>G]; XP_008196619.1:c.[668A>G]","XP_008196618.1:p.[Asp223Gly]; XP_015837998.1:p.[Asp161Gly]; XP_008196619.1:p.[Asp223Gly]","LOC103313907",103313907,null,"103313907 [Gene Symbol: LOC103313907] [Locus Tag: TcasGA2_TC006273] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313907] [Gene Type: protein-coding]","TcasGA2_TC006273; LOC103313907"]
[1052,"NC_007423.3",6061365,"SNV","T","C","Homozygous",20,20,100,1,12,8,0.4,38,20,20,7,10,null,1,1,"no","C/C","No",1,80.88,"XP_008196619.1:c.[955T>C]; XP_008196618.1:c.[955T>C]; XP_015837998.1:c.[769T>C]","XP_008196619.1:p.[Phe319Leu]; XP_008196618.1:p.[Phe319Leu]; XP_015837998.1:p.[Phe257Leu]","LOC103313907",103313907,null,"103313907 [Gene Symbol: LOC103313907] [Locus Tag: TcasGA2_TC006273] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313907] [Gene Type: protein-coding]","TcasGA2_TC006273; LOC103313907"]
[1053,"NC_007423.3",6117583,"SNV","C","T","Homozygous",21,21,100,1,15,7,0.32,37.33,22,22,10,17,null,1,1,"no","T/T","No",1,85.53,"XP_969421.1:c.308G>A","XP_969421.1:p.Arg103Lys","LOC107398445, LOC657901","107398445 , 657901",null,"107398445 [Gene Symbol: LOC107398445] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398445] [Gene Type: ncRNA] || 657901 [Gene Symbol: LOC657901] [Locus Tag: TcasGA2_TC005874] [Chromosome: LG8] [Map Location: ] [Description: glucose dehydrogenase [FAD, quinone]] [Gene Type: protein-coding]","LOC107398445 || TcasGA2_TC005874; LOC657901"]
[1054,"NC_007423.3",6190282,"SNV","C","T","Homozygous",20,20,100,1,8,15,0.35,35.1,23,23,11,9,null,1,1,"no","T/T","No",1,82.53,"XP_015837991.1:c.[1377+401G>A]; XP_008196637.1:c.[17C>T]; XP_015837990.1:c.[1377+401G>A]; XP_015837989.1:c.[1377+401G>A]; XP_015837992.1:c.[1377+401G>A]","XP_008196637.1:p.Thr6Ile","LOC658889, LOC103313911","658889 , 103313911",null,"658889 [Gene Symbol: LOC658889] [Locus Tag: TcasGA2_TC005866] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: probable ATP-dependent DNA helicase HFM1] [Gene Type: protein-coding] || 103313911 [Gene Symbol: LOC103313911] [Locus Tag: TcasGA2_TC034021] [Chromosome: LG8] [Map Location: ] [Description: pro-resilin-like] [Gene Type: protein-coding]","LOC658889; HFM1; TcasGA2_TC005866 || TcasGA2_TC034021; LOC103313911"]
[1055,"NC_007423.3",6200611,"SNV","T","G","Homozygous",27,27,100,1,21,6,0.22,37.07,27,27,8,18,null,1,1,"no","G/G","No",1,101.94,"XP_970535.2:c.[684T>G]; XP_008196638.1:c.[774T>G]","XP_970535.2:p.[Phe228Leu]; XP_008196638.1:p.[Phe258Leu]","LOC659110",659110,null,"659110 [Gene Symbol: LOC659110] [Locus Tag: TcasGA2_TC006284] [Chromosome: LG8] [Map Location: ] [Description: gamma-glutamyltranspeptidase 1] [Gene Type: protein-coding]","LOC659110; TcasGA2_TC006284"]
[1056,"NC_007423.3",6745893,"SNV","C","T","Heterozygous",7,24,29.17,1,7,6,0.46,35.29,13,35,3,7,-0.38,0.39,0.86,"no","complex","No",1,200,"XP_008196671.1:c.[904C>T]; XP_008196670.1:c.[904C>T]","XP_008196671.1:p.[Pro302Ser]; XP_008196670.1:p.[Pro302Ser]","LOC661340",661340,null,"661340 [Gene Symbol: LOC661340] [Locus Tag: TcasGA2_TC006299] [Chromosome: LG8] [Map Location: ] [Description: death-associated protein kinase 1] [Gene Type: protein-coding]","TcasGA2_TC006299; LOC661340"]
[1057,"NC_007423.3","6745894..6745895","MNV","CT","TC","Heterozygous",19,28,67.86,1,17,8,0.32,36.54,25,40,14,15,null,0.91,1,"no","complex","No",1,200,"XP_008196671.1:c.[905_906delCTinsTC]; XP_008196670.1:c.[905_906delCTinsTC]","XP_008196671.1:p.[Pro302Leu]; XP_008196670.1:p.[Pro302Leu]","LOC661340",661340,null,"661340 [Gene Symbol: LOC661340] [Locus Tag: TcasGA2_TC006299] [Chromosome: LG8] [Map Location: ] [Description: death-associated protein kinase 1] [Gene Type: protein-coding]","TcasGA2_TC006299; LOC661340"]
[1059,"NC_007423.3",6992810,"SNV","G","C","Homozygous",22,22,100,1,13,9,0.41,36.5,22,22,11,14,null,1,1,"no","C/C","No",1,86.9,"XP_008196691.1:c.[3911G>C]; XP_015838021.1:c.[3905G>C]; XP_015838020.1:c.[3911G>C]; XP_015838019.1:c.[3911G>C]","XP_008196691.1:p.[Gly1304Ala]; XP_015838021.1:p.[Gly1302Ala]; XP_015838020.1:p.[Gly1304Ala]; XP_015838019.1:p.[Gly1304Ala]","LOC661809",661809,null,"661809 [Gene Symbol: LOC661809] [Locus Tag: TcasGA2_TC034037] [Chromosome: LG8] [Map Location: ] [Description: titin-like] [Gene Type: protein-coding]","LOC661809; TcasGA2_TC034037"]
[1061,"NC_007423.3",7000999,"SNV","T","C","Heterozygous",51,91,56.04,1,33,26,0.44,37.71,59,111,31,38,-0.74,0.77,1,"no","C/T","No",1,200,"XP_008194622.1:c.[1951A>G]; XP_008194621.1:c.[2176A>G]","XP_008194622.1:p.[Asn651Asp]; XP_008194621.1:p.[Asn726Asp]","LOC103313361",103313361,null,"103313361 [Gene Symbol: LOC103313361] [Locus Tag: TcasGA2_TC015228] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313361] [Gene Type: protein-coding]","TcasGA2_TC015228; LOC103313361"]
[1063,"NC_007423.3",7025585,"SNV","G","A","Heterozygous",12,21,57.14,1,6,6,0.5,35.25,12,21,7,3,-1.03,0.84,0.99,"no","A/G","No",1,70.8,"XP_972482.1:c.539C>T","XP_972482.1:p.Ala180Val","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1064,"NC_007423.3",7025642,"SNV","C","T","Heterozygous",11,22,50,1,0,11,0,38.18,11,25,3,3,0.69,0.23,0.16,"no","C/T","No",1,89.68,"XP_972482.1:c.482G>A","XP_972482.1:p.Ser161Asn","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1065,"NC_007423.3",7025651,"SNV","C","T","Heterozygous",12,25,48,1,0,12,0,37.83,12,25,3,3,-0.49,0.13,0.19,"no","C/T","No",1,96.17,"XP_972482.1:c.473G>A","XP_972482.1:p.Arg158His","LOC661214",661214,null,"661214 [Gene Symbol: LOC661214] [Locus Tag: TcasGA2_TC015224] [Chromosome: LG8] [Map Location: ] [Description: serpin peptidase inhibitor 31] [Gene Type: protein-coding]","LOC661214; serpin31; TcasGA2_TC015224"]
[1067,"NC_007423.3",7094578,"SNV","C","G","Heterozygous",9,28,32.14,1,7,5,0.42,36.22,12,39,6,8,-0.39,0.33,1,"no","C/G","No",1,50.17,"XP_008196695.1:c.5006C>G","XP_008196695.1:p.Ala1669Gly","LOC655218",655218,null,"655218 [Gene Symbol: LOC655218] [Locus Tag: TcasGA2_TC006310] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase ATR] [Gene Type: protein-coding]","LOC655218; TcasGA2_TC006310; ATR; mei-41"]
[1068,"NC_007423.3","7119906^7119907","Insertion","-","AAG","Homozygous",23,24,95.83,1,12,18,0.4,37.8,30,32,12,16,null,1,1,"no","AAG/AAG","No",1,200,"XP_008196698.1:c.1297_1298insAAG","XP_008196698.1:p.Glu436_Lys437insGlu","LOC655542",655542,null,"655542 [Gene Symbol: LOC655542] [Locus Tag: TcasGA2_TC006313] [Chromosome: LG8] [Map Location: ] [Description: ribosome biogenesis protein BMS1 homolog] [Gene Type: protein-coding]","TcasGA2_TC006313; LOC655542"]
[1069,"NC_007423.3",7142079,"SNV","G","C","Homozygous",32,32,100,1,5,27,0.16,35.34,32,32,11,13,null,1,1,"no","C/C","No",1,116.99,"XP_976162.1:c.1251G>C","XP_976162.1:p.Glu417Asp","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1070,"NC_007423.3",7144080,"SNV","G","C","Heterozygous",10,22,45.45,1,7,3,0.3,39.6,10,26,5,9,null,0.17,0.91,"no","C/T","No",1,80.88,"XP_976162.1:c.3114G>C","XP_976162.1:p.Glu1038Asp","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1071,"NC_007423.3",7144080,"SNV","G","T","Heterozygous",12,22,54.55,1,8,8,0.5,38.58,16,26,4,9,null,0.21,0.98,"no","C/T","No",1,80.88,"XP_976162.1:c.3114G>T","XP_976162.1:p.Glu1038Asp","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1072,"NC_007423.3",7145538,"SNV","G","A","Homozygous",29,29,100,1,10,22,0.31,38.45,32,32,12,16,null,1,1,"no","A/A","No",1,109.57,"XP_976162.1:c.4085G>A","XP_976162.1:p.Arg1362Lys","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1073,"NC_007423.3",7145561,"SNV","T","A","Heterozygous",13,39,33.33,1,6,9,0.4,38.85,15,41,7,8,1.62,0.19,0.68,"no","A/T","No",1,70.21,"XP_976162.1:c.4108T>A","XP_976162.1:p.Ser1370Thr","LOC656030",656030,null,"656030 [Gene Symbol: LOC656030] [Locus Tag: TcasGA2_TC006316] [Chromosome: LG8] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC656030; TcasGA2_TC006316"]
[1075,"NC_007423.3",7236906,"Deletion","G","-","Homozygous",20,20,100,1,8,19,0.3,38.15,27,27,6,12,null,1,1,"no","-/-","No",1,88.98,"XP_015838212.1:c.541delG","XP_015838212.1:p.Ala182fs","LOC657509",657509,null,"657509 [Gene Symbol: LOC657509] [Locus Tag: TcasGA2_TC006326] [Chromosome: LG8] [Map Location: ] [Description: multiple inositol polyphosphate phosphatase 1] [Gene Type: protein-coding]","LOC657509; TcasGA2_TC006326"]
[1076,"NC_007423.3",7313363,"SNV","T","A","Homozygous",26,26,100,1,14,23,0.38,35.62,37,37,10,9,null,1,1,"no","A/A","No",1,100.55,"XP_969567.1:c.895A>T","XP_969567.1:p.Thr299Ser","LOC658061",658061,null,"658061 [Gene Symbol: LOC658061] [Locus Tag: TcasGA2_TC005814] [Chromosome: LG8] [Map Location: ] [Description: 72 kDa inositol polyphosphate 5-phosphatase] [Gene Type: protein-coding]","LOC658061; TcasGA2_TC005814"]
[1077,"NC_007423.3",7316609,"SNV","T","C","Homozygous",20,20,100,1,12,10,0.45,36.5,22,22,8,17,null,1,1,"no","C/C","No",1,80.88,"XP_969645.1:c.166T>C","XP_969645.1:p.Ser56Pro","LOC658143",658143,null,"658143 [Gene Symbol: LOC658143] [Locus Tag: TcasGA2_TC006331] [Chromosome: LG8] [Map Location: ] [Description: hrp65 protein] [Gene Type: protein-coding]","TcasGA2_TC006331; LOC658143"]
[1078,"NC_007423.3",7394256,"SNV","T","C","Homozygous",29,29,100,1,22,17,0.44,37.59,39,39,10,14,null,1,1,"no","C/C","No",1,107.97,"XP_008196732.1:c.[341T>C]; XP_008196731.1:c.[350T>C]","XP_008196732.1:p.[Leu114Pro]; XP_008196731.1:p.[Leu117Pro]","LOC103313938",103313938,null,"103313938 [Gene Symbol: LOC103313938] [Locus Tag: TcasGA2_TC006340] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103313938] [Gene Type: protein-coding]","LOC103313938; TcasGA2_TC006340"]
[1080,"NC_007423.3",7428656,"SNV","T","C","Homozygous",22,22,100,1,18,4,0.18,37.64,22,22,11,15,null,1,1,"no","C/C","No",1,86.9,"XP_015838038.1:c.6028A>G","XP_015838038.1:p.Ile2010Val","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1081,"NC_007423.3",7428770,"SNV","T","C","Homozygous",27,27,100,1,13,14,0.48,38.07,27,27,13,16,null,1,1,"no","C/C","No",1,101.94,"XP_015838038.1:c.5914A>G","XP_015838038.1:p.Thr1972Ala","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1082,"NC_007423.3",7428777,"SNV","T","C","Homozygous",28,28,100,1,13,15,0.46,36.61,28,28,14,16,null,1,1,"no","C/C","No",1,104.95,"XP_015838038.1:c.5907A>G","XP_015838038.1:p.Ile1969Met","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1084,"NC_007423.3",7434837,"SNV","C","T","Homozygous",20,20,100,1,20,7,0.26,38.3,27,27,8,11,null,1,1,"no","T/T","No",1,82.52,"XP_015838038.1:c.166G>A","XP_015838038.1:p.Glu56Lys","LOC107398452",107398452,null,"107398452 [Gene Symbol: LOC107398452] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398452] [Gene Type: protein-coding]","LOC107398452"]
[1085,"NC_007423.3",7439024,"SNV","C","T","Homozygous",20,20,100,1,7,16,0.3,35.45,23,23,7,11,null,1,1,"no","T/T","No",1,82.52,"XP_015838039.1:c.1601G>A","XP_015838039.1:p.Arg534His","LOC107398453",107398453,null,"107398453 [Gene Symbol: LOC107398453] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: polycystic kidney disease protein 1-like 2] [Gene Type: protein-coding]","LOC107398453"]
[1086,"NC_007423.3",7440594,"SNV","G","T","Homozygous",20,20,100,1,6,18,0.25,36.7,24,24,7,5,null,1,1,"no","T/T","No",1,82.52,"XP_015838039.1:c.131C>A","XP_015838039.1:p.Ala44Asp","LOC107398453, LOC107398491","107398453 , 107398491",null,"107398453 [Gene Symbol: LOC107398453] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: polycystic kidney disease protein 1-like 2] [Gene Type: protein-coding] || 107398491 [Gene Symbol: LOC107398491] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sperm receptor for egg jelly-like] [Gene Type: protein-coding]","LOC107398453 || LOC107398491"]
[1087,"NC_007423.3",7445762,"SNV","C","G","Heterozygous",14,23,60.87,1,12,2,0.14,40,14,29,6,12,2.8,0.59,0.76,"no","C/G","No",1,54.35,"XP_008196749.1:c.454G>C","XP_008196749.1:p.Asp152His","LOC659665",659665,null,"659665 [Gene Symbol: LOC659665] [Locus Tag: TcasGA2_TC005802] [Chromosome: LG8] [Map Location: ] [Description: GPI inositol-deacylase] [Gene Type: protein-coding]","LOC659665; TcasGA2_TC005802"]
[1088,"NC_007423.3",7458777,"SNV","T","C","Heterozygous",10,24,41.67,1,7,3,0.3,36.6,10,27,3,6,-1.32,0.14,0.53,"no","C/T","No",1,75.31,"XP_971167.2:c.566A>G","XP_971167.2:p.Asn189Ser","LOC659802",659802,null,"659802 [Gene Symbol: LOC659802] [Locus Tag: TcasGA2_TC030778] [Chromosome: LG8] [Map Location: ] [Description: SET and MYND domain-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC030778; LOC659802"]
[1089,"NC_007423.3",7458785,"SNV","A","T","Heterozygous",10,24,41.67,1,7,3,0.3,36.2,10,27,3,6,-0.12,0.13,0.53,"no","A/T","No",1,73.78,"XP_971167.2:c.558T>A","XP_971167.2:p.Asn186Lys","LOC659802",659802,null,"659802 [Gene Symbol: LOC659802] [Locus Tag: TcasGA2_TC030778] [Chromosome: LG8] [Map Location: ] [Description: SET and MYND domain-containing protein 4] [Gene Type: protein-coding]","TcasGA2_TC030778; LOC659802"]
[1090,"NC_007423.3",7541867,"SNV","A","G","Homozygous",20,20,100,1,13,16,0.45,35.8,29,29,7,7,null,1,1,"no","G/G","No",1,80.87,"XP_008196751.1:c.19A>G","XP_008196751.1:p.Thr7Ala","LOC660497",660497,null,"660497 [Gene Symbol: LOC660497] [Locus Tag: TcasGA2_TC006345] [Chromosome: LG8] [Map Location: ] [Description: dynein regulatory complex protein 1 homolog] [Gene Type: protein-coding]","LOC660497; TcasGA2_TC006345"]
[1091,"NC_007423.3",7756249,"SNV","G","T","Homozygous",25,25,100,1,21,6,0.22,38.04,27,27,12,16,null,1,1,"no","T/T","No",1,97.56,"XP_008196758.1:c.1735C>A","XP_008196758.1:p.Arg579Ser","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1092,"NC_007423.3",7756267,"SNV","C","G","Homozygous",20,20,100,1,17,5,0.23,36.65,22,22,9,14,null,1,1,"no","G/G","No",1,80.88,"XP_008196758.1:c.1717G>C","XP_008196758.1:p.Glu573Gln","LOC660948",660948,null,"660948 [Gene Symbol: LOC660948] [Locus Tag: TcasGA2_TC005782] [Chromosome: LG8] [Map Location: ] [Description: integrin beta-nu] [Gene Type: protein-coding]","TcasGA2_TC005782; LOC660948"]
[1093,"NC_007423.3",7841222,"SNV","G","T","Heterozygous",13,26,50,1,9,7,0.44,38.46,16,29,8,8,2.21,0.76,0.91,"no","G/T","No",1,100.95,"XP_015838157.1:c.[4223G>T]; XP_015838156.1:c.[4370G>T]; XP_008196764.1:c.[4241G>T]; XP_008196763.1:c.[4631G>T]; XP_008196762.1:c.[4631G>T]","XP_015838157.1:p.[Ser1408Ile]; XP_015838156.1:p.[Ser1457Ile]; XP_008196764.1:p.[Ser1414Ile]; XP_008196763.1:p.[Ser1544Ile]; XP_008196762.1:p.[Ser1544Ile]","LOC661278",661278,null,"661278 [Gene Symbol: LOC661278] [Locus Tag: TcasGA2_TC006356] [Chromosome: LG8] [Map Location: ] [Description: protein split ends] [Gene Type: protein-coding]","LOC661278; TcasGA2_TC006356"]
[1094,"NC_007423.3",7844659,"SNV","C","G","Homozygous",21,22,95.45,1,13,9,0.41,37.33,22,23,12,13,null,1,1,"no","G/G","No",1,55.17,"XP_008196764.1:c.[7678C>G]; XP_008196762.1:c.[8068C>G]; XP_008196763.1:c.[8068C>G]; XP_015838156.1:c.[7807C>G]; XP_015838157.1:c.[7660C>G]","XP_008196764.1:p.[Gln2560Glu]; XP_008196762.1:p.[Gln2690Glu]; XP_008196763.1:p.[Gln2690Glu]; XP_015838156.1:p.[Gln2603Glu]; XP_015838157.1:p.[Gln2554Glu]","LOC661278",661278,null,"661278 [Gene Symbol: LOC661278] [Locus Tag: TcasGA2_TC006356] [Chromosome: LG8] [Map Location: ] [Description: protein split ends] [Gene Type: protein-coding]","LOC661278; TcasGA2_TC006356"]
[1095,"NC_007423.3",7845014,"SNV","C","G","Homozygous",26,26,100,1,26,5,0.16,35.69,31,31,10,20,null,1,1,"no","G/G","No",1,95.92,"XP_008196762.1:c.[8423C>G]; XP_015838156.1:c.[8162C>G]; XP_008196764.1:c.[8033C>G]; XP_015838157.1:c.[8015C>G]; XP_008196763.1:c.[8423C>G]","XP_008196762.1:p.[Ser2808Cys]; XP_015838156.1:p.[Ser2721Cys]; XP_008196764.1:p.[Ser2678Cys]; XP_015838157.1:p.[Ser2672Cys]; XP_008196763.1:p.[Ser2808Cys]","LOC661278",661278,null,"661278 [Gene Symbol: LOC661278] [Locus Tag: TcasGA2_TC006356] [Chromosome: LG8] [Map Location: ] [Description: protein split ends] [Gene Type: protein-coding]","LOC661278; TcasGA2_TC006356"]
[1096,"NC_007423.3",7896527,"SNV","C","T","Heterozygous",56,83,67.47,1,30,37,0.45,36.93,67,102,26,28,-0.72,0.95,1,"no","C/T","No",1,127.98,"XP_015838210.1:c.[800C>T]; XP_972897.1:c.[800C>T]","XP_015838210.1:p.[Ser267Leu]; XP_972897.1:p.[Ser267Leu]","LOC661654",661654,null,"661654 [Gene Symbol: LOC661654] [Locus Tag: TcasGA2_TC006360] [Chromosome: LG8] [Map Location: ] [Description: translocation protein SEC62] [Gene Type: protein-coding]","TcasGA2_TC006360; LOC661654"]
[1097,"NC_007423.3","7896628^7896629","Insertion","-","AGA","Heterozygous",93,122,76.23,1,56,58,0.49,36.8,114,146,38,50,3.46,0.99,1,"no","complex","No",1,200,"XP_972897.1:c.[850_851insAGA]; XP_015838210.1:c.[850_851insAGA]","XP_972897.1:p.[Lys290_Asp291insLys]; XP_015838210.1:p.[Lys290_Asp291insLys]","LOC661654",661654,null,"661654 [Gene Symbol: LOC661654] [Locus Tag: TcasGA2_TC006360] [Chromosome: LG8] [Map Location: ] [Description: translocation protein SEC62] [Gene Type: protein-coding]","TcasGA2_TC006360; LOC661654"]
[1098,"NC_007423.3",7897455,"SNV","T","C","Heterozygous",37,57,64.91,1,13,26,0.33,36.41,39,61,17,22,-0.75,0.88,1,"no","C/T","No",1,108.99,"XP_972934.1:c.343A>G","XP_972934.1:p.Thr115Ala","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1100,"NC_007423.3","7897735..7897739","Replacement","GGGAG","TTT","Homozygous",30,31,96.77,1,7,28,0.2,38.98,35,37,16,18,null,1,1,"no","TTT/TTT","No",1,200,"XP_972934.1:c.113_117delCTCCCinsAAA","XP_972934.1:p.Thr38fs","LOC661693",661693,null,"661693 [Gene Symbol: LOC661693] [Locus Tag: TcasGA2_TC005773] [Chromosome: LG8] [Map Location: ] [Description: tetratricopeptide repeat protein 36 homolog] [Gene Type: protein-coding]","LOC661693; TcasGA2_TC005773"]
[1104,"NC_007423.3",7900173,"SNV","T","G","Homozygous",95,95,100,1,46,54,0.46,37.28,100,100,40,48,null,1,1,"no","G/G","No",1,200,"XP_972976.2:c.2286A>C","XP_972976.2:p.Gln762His","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1108,"NC_007423.3",7900783,"SNV","C","T","Homozygous",55,58,94.83,1,21,41,0.34,37.07,62,65,23,29,null,1,1,"no","T/T","No",1,108.8,"XP_972976.2:c.1723G>A","XP_972976.2:p.Asp575Asn","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1109,"NC_007423.3",7901948,"SNV","G","A","Homozygous",57,64,89.06,1,45,19,0.3,35.98,64,73,28,43,null,0.98,1,"no","A/A","No",1,74.5,"XP_972976.2:c.1166C>T","XP_972976.2:p.Ala389Val","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1110,"NC_007423.3",7902275,"SNV","C","T","Homozygous",63,63,100,1,30,37,0.45,36.62,67,67,28,35,null,1,1,"no","T/T","No",1,200,"XP_972976.2:c.839G>A","XP_972976.2:p.Gly280Asp","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1111,"NC_007423.3",7902914,"SNV","C","T","Heterozygous",23,78,29.49,1,17,7,0.29,36.26,24,91,11,14,-0.82,0.03,0.18,"no","C/T","No",1,88.86,"XP_972976.2:c.247G>A","XP_972976.2:p.Ala83Thr","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1112,"NC_007423.3",7902974,"SNV","T","C","Homozygous",81,97,83.51,1,43,46,0.48,38.07,89,107,30,51,-0.64,1,1,"no","C/C","No",1,53.41,"XP_972976.2:c.187A>G","XP_972976.2:p.Lys63Glu","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1113,"NC_007423.3",7903100,"SNV","T","C","Heterozygous",53,76,69.74,1,23,35,0.4,37.53,58,84,24,30,-0.6,0.87,0.99,"no","C/T","No",1,94.23,"XP_972976.2:c.110A>G","XP_972976.2:p.Tyr37Cys","LOC661737",661737,null,"661737 [Gene Symbol: LOC661737] [Locus Tag: TcasGA2_TC005772] [Chromosome: LG8] [Map Location: ] [Description: trifunctional purine biosynthetic protein adenosine-3] [Gene Type: protein-coding]","TcasGA2_TC005772; LOC661737"]
[1116,"NC_007423.3",8225605,"SNV","G","C","Homozygous",23,23,100,1,8,16,0.33,36.74,24,24,11,12,null,1,1,"no","C/C","No",1,89.91,"XP_008196886.1:c.201C>G","XP_008196886.1:p.Ser67Arg","LOC103313989",103313989,null,"103313989 [Gene Symbol: LOC103313989] [Locus Tag: TcasGA2_TC005755] [Chromosome: LG8] [Map Location: ] [Description: RE1-silencing transcription factor] [Gene Type: protein-coding]","LOC103313989; TcasGA2_TC005755"]
[1117,"NC_007423.3",8252952,"SNV","C","T","Heterozygous",8,20,40,1,4,6,0.4,37,10,22,4,6,-0.69,0.52,0.76,"no","C/T","No",1,59.24,"XP_008196805.1:c.803G>A","XP_008196805.1:p.Arg268Lys","LOC103313952",103313952,null,"103313952 [Gene Symbol: LOC103313952] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: antichymotrypsin-2] [Gene Type: protein-coding]","serpin14; LOC103313952"]
[1118,"NC_007423.3",8281548,"SNV","G","C","Heterozygous",13,22,59.09,1,12,5,0.29,36.92,17,26,5,9,-2,0.13,0.59,"no","C/G","No",1,66.87,"XP_008196808.1:c.[905C>G]; XP_008196807.1:c.[905C>G]","XP_008196808.1:p.[Thr302Arg]; XP_008196807.1:p.[Thr302Arg]","LOC103313954",103313954,null,"103313954 [Gene Symbol: LOC103313954] [Locus Tag: TcasGA2_TC005739] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313954; TcasGA2_TC005739"]
[1119,"NC_007423.3",8281914,"SNV","A","G","Heterozygous",19,37,51.35,1,11,14,0.44,37.53,25,43,10,13,-2.6,0.8,1,"no","A/G","No",1,139.13,"XP_008196807.1:c.[539T>C]; XP_008196808.1:c.[539T>C]","XP_008196807.1:p.[Leu180Pro]; XP_008196808.1:p.[Leu180Pro]","LOC103313954",103313954,null,"103313954 [Gene Symbol: LOC103313954] [Locus Tag: TcasGA2_TC005739] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103313954; TcasGA2_TC005739"]
[1120,"NC_007423.3",8352306,"SNV","G","C","Homozygous",20,20,100,1,6,14,0.3,37.2,20,20,6,11,null,1,1,"no","C/C","No",1,80.88,"XP_015838044.1:c.3989C>G","XP_015838044.1:p.Ser1330Cys","LOC103313993",103313993,null,"103313993 [Gene Symbol: LOC103313993] [Locus Tag: TcasGA2_TC005735] [Chromosome: LG8] [Map Location: ] [Description: sperm flagellar protein 2] [Gene Type: protein-coding]","TcasGA2_TC005735; LOC103313993"]
[1121,"NC_007423.3",8367524,"SNV","T","C","Homozygous",20,20,100,1,11,9,0.45,37.7,20,20,8,10,null,1,1,"no","C/C","No",1,80.88,"NP_001103248.1:c.452T>C","NP_001103248.1:p.Ile151Thr","Tcas_11340",663425,"cys-loop ligand-gated ion channel subunit","663425 [Gene Symbol: Tcas_11340] [Locus Tag: TcasGA2_TC006391] [Chromosome: LG8] [Map Location: ] [Description: cys-loop ligand-gated ion channel subunit] [Gene Type: protein-coding]","Tcas_11340; TcasGA2_TC006391"]
[1122,"NC_007423.3",8566407,"SNV","T","G","Heterozygous",12,20,60,1,5,12,0.29,36.83,17,31,5,6,1.7,0.86,0.86,"no","G/T","No",1,54.54,"XP_975143.1:c.1590A>C","XP_975143.1:p.Lys530Asn","LOC664029",664029,null,"664029 [Gene Symbol: LOC664029] [Locus Tag: TcasGA2_TC005714] [Chromosome: LG8] [Map Location: ] [Description: 2-hydroxyacyl-CoA lyase 1] [Gene Type: protein-coding]","LOC664029; TcasGA2_TC005714"]
[1123,"NC_007423.3",8835964,"SNV","T","C","Homozygous",24,24,100,1,11,18,0.38,39.79,29,29,9,12,null,1,1,"no","C/C","No",1,92.92,"XP_008196859.1:c.[103A>G]; XP_008196858.1:c.[118A>G]","XP_008196859.1:p.[Ser35Gly]; XP_008196858.1:p.[Ser40Gly]","LOC664097",664097,null,"664097 [Gene Symbol: LOC664097] [Locus Tag: TcasGA2_TC005702] [Chromosome: LG8] [Map Location: ] [Description: polypeptide N-acetylgalactosaminyltransferase 1] [Gene Type: protein-coding]","LOC664097; TcasGA2_TC005702"]
[1124,"NC_007423.3",9356302,"SNV","G","A","Homozygous",21,21,100,1,18,12,0.4,37.81,30,30,13,15,null,1,1,"no","A/A","No",1,85.5,"XP_008194619.1:c.425G>A","XP_008194619.1:p.Gly142Glu","LOC103313359",103313359,null,"103313359 [Gene Symbol: LOC103313359] [Locus Tag: TcasGA2_TC015231] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: chaoptin] [Gene Type: protein-coding]","LOC103313359; TcasGA2_TC015231"]
[1125,"NC_007423.3",9371881,"SNV","G","A","Heterozygous",12,22,54.55,1,8,9,0.47,36.83,17,31,6,10,-0.43,1,1,"no","A/G","No",1,80.78,"XP_015838168.1:c.[814G>A]; XP_008194603.1:c.[814G>A]; XP_008194602.1:c.[835G>A]; XP_008194604.1:c.[679G>A]","XP_015838168.1:p.[Ala272Thr]; XP_008194603.1:p.[Ala272Thr]; XP_008194602.1:p.[Ala279Thr]; XP_008194604.1:p.[Ala227Thr]","LOC660719",660719,null,"660719 [Gene Symbol: LOC660719] [Locus Tag: TcasGA2_TC015234] [Chromosome: LG8] [Map Location: ] [Description: chorion peroxidase] [Gene Type: protein-coding]","LOC660719; TcasGA2_TC015234"]
[1126,"NC_007423.3",9374095,"SNV","T","G","Heterozygous",9,27,33.33,1,0,9,0,38.78,9,27,5,3,-0.44,0.26,0.2,"no","G/T","No",1,55.59,"XP_008194603.1:c.[2848T>G]; XP_015838168.1:c.[2848T>G]; XP_008194602.1:c.[2869T>G]; XP_008194604.1:c.[2713T>G]","XP_008194603.1:p.[Ser950Ala]; XP_015838168.1:p.[Ser950Ala]; XP_008194602.1:p.[Ser957Ala]; XP_008194604.1:p.[Ser905Ala]","LOC660719",660719,null,"660719 [Gene Symbol: LOC660719] [Locus Tag: TcasGA2_TC015234] [Chromosome: LG8] [Map Location: ] [Description: chorion peroxidase] [Gene Type: protein-coding]","LOC660719; TcasGA2_TC015234"]
[1127,"NC_007423.3",9453628,"SNV","A","T","Homozygous",26,26,100,1,19,8,0.3,37.46,27,27,11,19,null,1,1,"no","T/T","No",1,100.57,"XP_015838046.1:c.4018A>T","XP_015838046.1:p.Thr1340Ser","LOC659859",659859,null,"659859 [Gene Symbol: LOC659859] [Locus Tag: TcasGA2_TC015245] [Chromosome: LG8] [Map Location: ] [Description: hornerin] [Gene Type: protein-coding]","TcasGA2_TC015245; LOC659859"]
[1128,"NC_007423.3",9457472,"SNV","G","T","Homozygous",22,22,100,1,10,16,0.38,39.14,26,26,10,11,null,1,1,"no","T/T","No",1,88.54,"XP_008194595.1:c.[711G>T]; XP_015838254.1:c.[711G>T]; XP_008194594.1:c.[711G>T]","XP_008194595.1:p.[Gln237His]; XP_015838254.1:p.[Gln237His]; XP_008194594.1:p.[Gln237His]","LOC103313346",103313346,null,"103313346 [Gene Symbol: LOC103313346] [Locus Tag: TcasGA2_TC015246] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313346] [Gene Type: protein-coding]","TcasGA2_TC015246; LOC103313346"]
[1130,"NC_007423.3",9509978,"SNV","C","A","Heterozygous",8,22,36.36,1,6,2,0.25,39.62,8,26,3,6,2.87,0.13,0.8,"no","A/C","No",1,51.86,"XP_008194584.2:c.[259+1531C>A]; XP_015838134.1:c.[114C>A]; XP_008194583.2:c.[259+1531C>A]","XP_015838134.1:p.Phe38Leu","LOC100141552, LOC107398476","100141552 , 107398476",null,"100141552 [Gene Symbol: LOC100141552] [Locus Tag: TcasGA2_TC015253] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141552] [Gene Type: protein-coding] || 107398476 [Gene Symbol: LOC107398476] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC107398476] [Gene Type: protein-coding]","LOC100141552; TcasGA2_TC015253 || LOC107398476"]
[1139,"NC_007423.3",9555474,"SNV","G","A","Homozygous",21,21,100,1,14,15,0.48,37.38,29,29,10,11,null,1,1,"no","A/A","No",1,85.5,"XP_969480.1:c.283G>A","XP_969480.1:p.Val95Met","LOC657968",657968,null,"657968 [Gene Symbol: LOC657968] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: battenin-like] [Gene Type: protein-coding]","LOC657968"]
[1141,"NC_007423.3",9631884,"SNV","A","T","Heterozygous",8,20,40,1,4,8,0.33,39.12,12,24,4,6,-0.77,0.9,1,"no","A/T","No",1,59.36,"XP_008194608.1:c.792T>A","XP_008194608.1:p.Asn264Lys","LOC656769",656769,null,"656769 [Gene Symbol: LOC656769] [Locus Tag: TcasGA2_TC015456] [Chromosome: LG8] [Map Location: ] [Description: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1] [Gene Type: protein-coding]","TcasGA2_TC015456; LOC656769"]
[1142,"NC_007423.3",9631887,"SNV","T","G","Heterozygous",8,20,40,1,4,8,0.33,39.12,12,24,4,6,-0.73,0.92,1,"no","G/T","No",1,62.31,"XP_008194608.1:c.789A>C","XP_008194608.1:p.Lys263Asn","LOC656769",656769,null,"656769 [Gene Symbol: LOC656769] [Locus Tag: TcasGA2_TC015456] [Chromosome: LG8] [Map Location: ] [Description: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1] [Gene Type: protein-coding]","TcasGA2_TC015456; LOC656769"]
[1143,"NC_007423.3",9631889,"SNV","T","C","Heterozygous",8,20,40,1,4,8,0.33,38.62,12,24,4,6,-1,0.92,1,"no","C/T","No",1,60.93,"XP_008194608.1:c.787A>G","XP_008194608.1:p.Lys263Glu","LOC656769",656769,null,"656769 [Gene Symbol: LOC656769] [Locus Tag: TcasGA2_TC015456] [Chromosome: LG8] [Map Location: ] [Description: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1] [Gene Type: protein-coding]","TcasGA2_TC015456; LOC656769"]
[1148,"NC_007423.3",9644110,"SNV","C","G","Heterozygous",13,34,38.24,1,12,7,0.37,39.08,19,42,8,9,0.32,0.45,1,"no","C/G","No",1,84.55,"XP_008194572.2:c.[1626G>C]; XP_008194571.2:c.[1626G>C]","XP_008194572.2:p.[Glu542Asp]; XP_008194571.2:p.[Glu542Asp]","LOC103313337",103313337,null,"103313337 [Gene Symbol: LOC103313337] [Locus Tag: TcasGA2_TC015454] [Chromosome: LG8] [Map Location: LG6|LG8] [Description: uncharacterized LOC103313337] [Gene Type: protein-coding]","LOC103313337; TcasGA2_TC015454"]
[1151,"NC_007423.3",10035527,"SNV","T","G","Heterozygous",11,21,52.38,1,7,4,0.36,38.64,11,23,6,8,-0.88,0.41,1,"no","G/T","No",1,77.19,"XP_008197062.1:c.51T>G","XP_008197062.1:p.Asp17Glu","LOC103314048",103314048,null,"103314048 [Gene Symbol: LOC103314048] [Locus Tag: TcasGA2_TC006464] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314048] [Gene Type: protein-coding]","LOC103314048; TcasGA2_TC006464"]
[1152,"NC_007423.3",10035534,"SNV","T","C","Heterozygous",11,21,52.38,1,7,4,0.36,38.73,11,23,6,8,-1.3,0.98,1,"no","C/T","No",1,81.76,"XP_008197062.1:c.58T>C","XP_008197062.1:p.Phe20Leu","LOC103314048",103314048,null,"103314048 [Gene Symbol: LOC103314048] [Locus Tag: TcasGA2_TC006464] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314048] [Gene Type: protein-coding]","LOC103314048; TcasGA2_TC006464"]
[1153,"NC_007423.3",10082444,"SNV","T","C","Homozygous",21,21,100,1,12,14,0.46,39.29,26,26,11,14,null,1,1,"no","C/C","No",1,83.89,"XP_008197063.1:c.670T>C","XP_008197063.1:p.Tyr224His","LOC658144",658144,null,"658144 [Gene Symbol: LOC658144] [Locus Tag: TcasGA2_TC006465] [Chromosome: LG8] [Map Location: ] [Description: myosin 15] [Gene Type: protein-coding]","LOC658144; Myo15; TcasGA2_TC006465"]
[1154,"NC_007423.3",10109829,"SNV","C","T","Homozygous",25,26,96.15,1,18,12,0.4,36.88,30,31,15,16,null,1,1,"no","T/T","No",1,66.78,"XP_969793.1:c.[156+1417C>T]; XP_015838225.1:c.[2987G>A]","XP_015838225.1:p.Arg996Gln","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1155,"NC_007423.3","10110387..10110388","MNV","AT","CC","Homozygous",24,24,100,1,6,18,0.25,35.55,24,24,9,14,null,1,1,"no","CC/CC","No",1,200,"XP_015838225.1:c.[2428_2429delATinsGG]; XP_969793.1:c.[156+1975_156+1976delATinsCC]","XP_015838225.1:p.Ile810Gly","LOC658298, LOC103314052","658298 , 103314052",null,"658298 [Gene Symbol: LOC658298] [Locus Tag: TcasGA2_TC006466] [Chromosome: LG8] [Map Location: ] [Description: adenylosuccinate lyase] [Gene Type: protein-coding] || 103314052 [Gene Symbol: LOC103314052] [Locus Tag: TcasGA2_TC005657] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006466; LOC658298 || LOC103314052; TcasGA2_TC005657"]
[1156,"NC_007423.3",10124614,"SNV","C","G","Homozygous",25,25,100,1,11,17,0.39,38.56,28,28,9,10,null,1,1,"no","G/G","No",1,95.92,"XP_015838223.1:c.[5299G>C]; XP_008197064.1:c.[5542G>C]; XP_015838222.1:c.[5461G>C]","XP_015838223.1:p.[Val1767Leu]; XP_008197064.1:p.[Val1848Leu]; XP_015838222.1:p.[Val1821Leu]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1157,"NC_007423.3",10125133,"SNV","T","C","Homozygous",23,23,100,1,8,19,0.3,36.3,27,27,9,13,null,1,1,"no","C/C","No",1,89.9,"XP_008197064.1:c.[5023A>G]; XP_015838223.1:c.[4780A>G]; XP_015838222.1:c.[5023A>G]","XP_008197064.1:p.[Ile1675Val]; XP_015838223.1:p.[Ile1594Val]; XP_015838222.1:p.[Ile1675Val]","LOC103314049",103314049,null,"103314049 [Gene Symbol: LOC103314049] [Locus Tag: TcasGA2_TC005652] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314049] [Gene Type: protein-coding]","TcasGA2_TC005652; LOC103314049"]
[1160,"NC_007423.3",10177074,"SNV","T","G","Homozygous",27,27,100,1,12,21,0.36,37.15,33,33,14,12,null,1,1,"no","G/G","No",1,101.94,"XP_008197071.1:c.1286A>C","XP_008197071.1:p.Lys429Thr","LOC658890",658890,null,"658890 [Gene Symbol: LOC658890] [Locus Tag: TcasGA2_TC005649] [Chromosome: LG8] [Map Location: ] [Description: zinc finger CCHC domain-containing protein 4] [Gene Type: protein-coding]","LOC658890; TcasGA2_TC005649"]
[1161,"NC_007423.3",10257150,"SNV","G","C","Homozygous",20,20,100,1,13,8,0.38,37.25,21,21,11,14,null,1,1,"no","C/C","No",1,80.88,"XP_015838160.1:c.[3780G>C]; XP_008197080.1:c.[3147G>C]; XP_970807.1:c.[4269G>C]","XP_015838160.1:p.[Glu1260Asp]; XP_008197080.1:p.[Glu1049Asp]; XP_970807.1:p.[Glu1423Asp]","LOC659405",659405,null,"659405 [Gene Symbol: LOC659405] [Locus Tag: TcasGA2_TC006477] [Chromosome: LG8] [Map Location: ] [Description: histone acetyltransferase KAT6A] [Gene Type: protein-coding]","LOC659405; TcasGA2_TC006477"]
[1163,"NC_007423.3",10408311,"SNV","T","C","Homozygous",27,27,100,1,17,14,0.45,37.78,31,31,9,16,null,1,1,"no","C/C","No",1,101.95,"XP_971107.1:c.517A>G","XP_971107.1:p.Asn173Asp","LOC659737",659737,null,"659737 [Gene Symbol: LOC659737] [Locus Tag: TcasGA2_TC005641] [Chromosome: LG8] [Map Location: ] [Description: neuropeptide Y receptor] [Gene Type: protein-coding]","TcasGA2_TC005641; LOC659737"]
[1164,"NC_007423.3",10411022,"SNV","A","C","Homozygous",26,26,100,1,16,17,0.48,36.85,33,33,6,12,null,1,1,"no","C/C","No",1,98.94,"XP_015838220.1:c.[309T>G]; XP_008197087.1:c.[309T>G]","XP_015838220.1:p.[His103Gln]; XP_008197087.1:p.[His103Gln]","LOC659803",659803,null,"659803 [Gene Symbol: LOC659803] [Locus Tag: TcasGA2_TC005640] [Chromosome: LG8] [Map Location: ] [Description: protein NDNF] [Gene Type: protein-coding]","TcasGA2_TC005640; LOC659803"]
[1165,"NC_007423.3",10412233,"SNV","T","C","Homozygous",20,20,100,1,2,20,0.09,38.75,22,22,6,10,null,1,1,"no","C/C","No",1,80.88,"XP_015838220.1:c.[43A>G]; XP_008197087.1:c.[43A>G]","XP_015838220.1:p.[Ile15Val]; XP_008197087.1:p.[Ile15Val]","LOC659803",659803,null,"659803 [Gene Symbol: LOC659803] [Locus Tag: TcasGA2_TC005640] [Chromosome: LG8] [Map Location: ] [Description: protein NDNF] [Gene Type: protein-coding]","TcasGA2_TC005640; LOC659803"]
[1167,"NC_007423.3",10416755,"SNV","C","G","Heterozygous",12,30,40,1,4,8,0.33,39.58,12,32,5,5,1.61,0.09,0.93,"no","C/G","No",1,82.93,"XP_015838307.1:c.931C>G","XP_015838307.1:p.Leu311Val","LOC659872",659872,null,"659872 [Gene Symbol: LOC659872] [Locus Tag: TcasGA2_TC006482] [Chromosome: LG8] [Map Location: ] [Description: somatostatin receptor type 5] [Gene Type: protein-coding]","TcasGA2_TC006482; LOC659872"]
[1168,"NC_007423.3",10416771,"SNV","C","T","Heterozygous",14,27,51.85,1,5,11,0.31,38.21,16,33,8,6,0.68,0.1,1,"no","C/T","No",1,104.89,"XP_015838307.1:c.947C>T","XP_015838307.1:p.Thr316Ile","LOC659872",659872,null,"659872 [Gene Symbol: LOC659872] [Locus Tag: TcasGA2_TC006482] [Chromosome: LG8] [Map Location: ] [Description: somatostatin receptor type 5] [Gene Type: protein-coding]","TcasGA2_TC006482; LOC659872"]
[1169,"NC_007423.3",10422554,"SNV","A","T","Homozygous",20,20,100,1,10,10,0.5,39.35,20,20,9,13,null,1,1,"no","T/T","No",1,82.52,"XP_015838285.1:c.[269T>A]; XP_008197089.1:c.[266T>A]","XP_015838285.1:p.[Ile90Asn]; XP_008197089.1:p.[Ile89Asn]","LOC103314055",103314055,null,"103314055 [Gene Symbol: LOC103314055] [Locus Tag: TcasGA2_TC005637] [Chromosome: LG8] [Map Location: ] [Description: protein msta, isoform B] [Gene Type: protein-coding]","LOC103314055; TcasGA2_TC005637"]
[1171,"NC_007423.3",10492101,"SNV","C","A","Heterozygous",9,25,36,1,9,0,0,37.22,9,27,3,7,-0.42,0.13,0.26,"no","A/C","No",1,53.5,"XP_015838061.1:c.193G>T","XP_015838061.1:p.Ala65Ser","LOC661004",661004,null,"661004 [Gene Symbol: LOC661004] [Locus Tag: TcasGA2_TC005627] [Chromosome: LG8] [Map Location: ] [Description: espin] [Gene Type: protein-coding]","LOC661004; TcasGA2_TC005627"]
[1172,"NC_007423.3",10492109,"SNV","G","T","Homozygous",23,23,100,1,17,6,0.26,36.91,23,23,10,16,null,1,1,"no","T/T","No",1,91.54,"XP_015838061.1:c.185C>A","XP_015838061.1:p.Thr62Asn","LOC661004",661004,null,"661004 [Gene Symbol: LOC661004] [Locus Tag: TcasGA2_TC005627] [Chromosome: LG8] [Map Location: ] [Description: espin] [Gene Type: protein-coding]","LOC661004; TcasGA2_TC005627"]
[1174,"NC_007423.3",10516487,"SNV","A","G","Heterozygous",10,26,38.46,1,6,10,0.38,36.1,16,32,5,5,0.53,0.38,0.52,"no","A/G","No",1,69.69,"XP_008197103.1:c.[196T>C]; XP_008197102.1:c.[196T>C]; XP_015838079.1:c.[1078-12467T>C]; XP_015838080.1:c.[1078-12467T>C]; XP_015838077.1:c.[196T>C]; XP_015838078.1:c.[1078-12467T>C]; XP_972642.2:c.[1078-12467T>C]","XP_008197103.1:p.[Phe66Leu]; XP_008197102.1:p.[Phe66Leu]; XP_015838077.1:p.[Phe66Leu]","LOC661389, LOC661279","661389 , 661279",null,"661389 [Gene Symbol: LOC661389] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: synaptotagmin 15] [Gene Type: protein-coding] || 661279 [Gene Symbol: LOC661279] [Locus Tag: TcasGA2_TC005624] [Chromosome: LG8] [Map Location: ] [Description: aldehyde dehydrogenase family 3 member B1] [Gene Type: protein-coding]","LOC661389; Syt15 || TcasGA2_TC005624; LOC661279"]
[1178,"NC_007423.3","10579011..10579012","MNV","AC","GT","Homozygous",27,32,84.38,1,14,18,0.44,36.8,32,37,10,19,null,0.36,0.98,"no","GT/GT","No",1,200,"XP_008197112.1:c.[686_687delGTinsAC]; XP_008197110.1:c.[1792+2906_1792+2907delGTinsAC]; XP_008197111.1:c.[689_690delGTinsAC]","XP_008197112.1:p.[Ser229Asn]; XP_008197111.1:p.[Ser230Asn]","LOC100141760",100141760,null,"100141760 [Gene Symbol: LOC100141760] [Locus Tag: TcasGA2_TC005619] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141760] [Gene Type: protein-coding]","TcasGA2_TC005619; LOC100141760"]
[1180,"NC_007423.3",10591332,"SNV","T","C","Heterozygous",10,20,50,1,6,10,0.38,37.4,16,29,3,5,-1.93,0.66,0.98,"no","C/T","No",1,82.46,"XP_972898.1:c.1775A>G","XP_972898.1:p.Lys592Arg","LOC661655",661655,null,"661655 [Gene Symbol: LOC661655] [Locus Tag: TcasGA2_TC005617] [Chromosome: LG8] [Map Location: ] [Description: DNA mismatch repair protein Mlh1] [Gene Type: protein-coding]","TcasGA2_TC005617; LOC661655"]
[1181,"NC_007423.3",10613048,"SNV","T","A","Homozygous",21,21,100,1,7,17,0.29,36.81,24,24,8,11,null,1,1,"no","A/A","No",1,85.5,"XP_015838055.1:c.[4687T>A]; XP_008197125.1:c.[4687T>A]; XP_008197127.1:c.[4687T>A]","XP_015838055.1:p.[Cys1563Ser]; XP_008197125.1:p.[Cys1563Ser]; XP_008197127.1:p.[Cys1563Ser]","LOC661900",661900,null,"661900 [Gene Symbol: LOC661900] [Locus Tag: TcasGA2_TC006498] [Chromosome: LG8] [Map Location: ] [Description: WD repeat-containing protein 81] [Gene Type: protein-coding]","TcasGA2_TC006498; LOC661900"]
[1182,"NC_007423.3","10643374..10643375","MNV","AC","GT","Heterozygous",16,21,76.19,1,3,13,0.19,38.34,16,23,6,8,0.1,0.52,0.71,"no","complex","No",1,200,"XP_973343.1:c.210_211delGTinsAC","XP_973343.1:p.Ser71Pro","LOC662133",662133,null,"662133 [Gene Symbol: LOC662133] [Locus Tag: TcasGA2_TC005609] [Chromosome: LG8] [Map Location: ] [Description: G2/mitotic-specific cyclin-A] [Gene Type: protein-coding]","TcasGA2_TC005609; LOC662133"]
[1184,"NC_007423.3",10650098,"SNV","C","G","Homozygous",22,22,100,1,21,4,0.16,39.36,25,25,9,15,null,1,1,"no","G/G","No",1,86.9,"XP_015838060.1:c.[3992C>G]; XP_015838059.1:c.[4106C>G]; XP_015838058.1:c.[4118C>G]; XP_008197135.1:c.[4118C>G]","XP_015838060.1:p.[Thr1331Ser]; XP_015838059.1:p.[Thr1369Ser]; XP_015838058.1:p.[Thr1373Ser]; XP_008197135.1:p.[Thr1373Ser]","LOC662167",662167,null,"662167 [Gene Symbol: LOC662167] [Locus Tag: TcasGA2_TC006501] [Chromosome: LG8] [Map Location: ] [Description: E3 ubiquitin-protein ligase RBBP6] [Gene Type: protein-coding]","TcasGA2_TC006501; LOC662167"]
[1185,"NC_007423.3",10699149,"SNV","T","A","Homozygous",21,21,100,1,18,14,0.44,38.52,32,32,13,9,null,1,1,"no","A/A","No",1,85.5,"XP_973477.1:c.[757A>T]; XP_008197141.1:c.[346-4491T>A]","XP_973477.1:p.Ile253Phe","LOC103314059, LOC662274","103314059 , 662274",null,"103314059 [Gene Symbol: LOC103314059] [Locus Tag: TcasGA2_TC006502] [Chromosome: LG8] [Map Location: ] [Description: kielin/chordin-like protein] [Gene Type: protein-coding] || 662274 [Gene Symbol: LOC662274] [Locus Tag: TcasGA2_TC005605] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC662274] [Gene Type: protein-coding]","TcasGA2_TC006502; LOC103314059 || LOC662274; TcasGA2_TC005605"]
[1186,"NC_007423.3",10699967,"SNV","C","A","Homozygous",20,20,100,1,15,5,0.25,40.2,20,20,8,14,null,1,1,"no","A/A","No",1,82.49,"XP_008197141.1:c.[346-3673C>A]; XP_973477.1:c.[93G>T]","XP_973477.1:p.Lys31Asn","LOC103314059, LOC662274","103314059 , 662274",null,"103314059 [Gene Symbol: LOC103314059] [Locus Tag: TcasGA2_TC006502] [Chromosome: LG8] [Map Location: ] [Description: kielin/chordin-like protein] [Gene Type: protein-coding] || 662274 [Gene Symbol: LOC662274] [Locus Tag: TcasGA2_TC005605] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC662274] [Gene Type: protein-coding]","TcasGA2_TC006502; LOC103314059 || LOC662274; TcasGA2_TC005605"]
[1187,"NC_007423.3",10699969,"SNV","T","C","Homozygous",21,21,100,1,15,6,0.29,39.86,21,21,8,15,null,1,1,"no","C/C","No",1,83.89,"XP_973477.1:c.[91A>G]; XP_008197141.1:c.[346-3671T>C]","XP_973477.1:p.Lys31Glu","LOC103314059, LOC662274","103314059 , 662274",null,"103314059 [Gene Symbol: LOC103314059] [Locus Tag: TcasGA2_TC006502] [Chromosome: LG8] [Map Location: ] [Description: kielin/chordin-like protein] [Gene Type: protein-coding] || 662274 [Gene Symbol: LOC662274] [Locus Tag: TcasGA2_TC005605] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC662274] [Gene Type: protein-coding]","TcasGA2_TC006502; LOC103314059 || LOC662274; TcasGA2_TC005605"]
[1188,"NC_007423.3",10705813,"SNV","T","C","Heterozygous",14,23,60.87,1,12,6,0.33,35.86,18,27,9,9,-1.32,0.68,0.85,"no","C/T","No",1,66.46,"XP_973577.1:c.[622T>C]; XP_015838081.1:c.[622T>C]","XP_973577.1:p.[Ser208Pro]; XP_015838081.1:p.[Ser208Pro]","LOC662386",662386,null,"662386 [Gene Symbol: LOC662386] [Locus Tag: TcasGA2_TC006506] [Chromosome: LG8] [Map Location: ] [Description: bone morphogenetic protein 10] [Gene Type: protein-coding]","LOC662386; BMP9; Bmp10; TcasGA2_TC006506"]
[1189,"NC_007423.3",10706669,"SNV","T","C","Homozygous",20,20,100,1,8,15,0.35,36.7,23,23,10,11,null,1,1,"no","C/C","No",1,80.88,"XP_973610.2:c.2476A>G","XP_973610.2:p.Ile826Val","LOC662420",662420,null,"662420 [Gene Symbol: LOC662420] [Locus Tag: TcasGA2_TC005603] [Chromosome: LG8] [Map Location: ] [Description: microsomal triglyceride transfer protein large subunit] [Gene Type: protein-coding]","TcasGA2_TC005603; LOC662420"]
[1190,"NC_007423.3",10707509,"SNV","A","G","Homozygous",27,27,100,1,21,21,0.5,36.63,42,42,9,9,null,1,1,"no","G/G","No",1,101.95,"XP_973610.2:c.1682T>C","XP_973610.2:p.Val561Ala","LOC662420",662420,null,"662420 [Gene Symbol: LOC662420] [Locus Tag: TcasGA2_TC005603] [Chromosome: LG8] [Map Location: ] [Description: microsomal triglyceride transfer protein large subunit] [Gene Type: protein-coding]","TcasGA2_TC005603; LOC662420"]
[1192,"NC_007423.3",10856073,"SNV","G","C","Homozygous",22,22,100,1,22,3,0.12,38.41,25,25,8,16,null,1,1,"no","C/C","No",1,86.9,"XP_008197149.1:c.58G>C","XP_008197149.1:p.Ala20Pro","LOC662716",662716,null,"662716 [Gene Symbol: LOC662716] [Locus Tag: TcasGA2_TC006516] [Chromosome: LG8] [Map Location: ] [Description: ribokinase] [Gene Type: protein-coding]","TcasGA2_TC006516; LOC662716"]
[1193,"NC_007423.3",10896016,"SNV","A","G","Homozygous",22,22,100,1,13,11,0.46,37.5,24,24,8,13,null,1,1,"no","G/G","No",1,83.89,"XP_008197167.1:c.[1504A>G]; XP_015838147.1:c.[1504A>G]","XP_008197167.1:p.[Ile502Val]; XP_015838147.1:p.[Ile502Val]","LOC103314071",103314071,null,"103314071 [Gene Symbol: LOC103314071] [Locus Tag: TcasGA2_TC006520] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314071] [Gene Type: protein-coding]","TcasGA2_TC006520; LOC103314071"]
[1194,"NC_007423.3",10988953,"SNV","G","T","Homozygous",37,37,100,1,22,25,0.47,36.27,47,47,18,22,null,1,1,"no","T/T","No",1,133.68,"XP_008196908.1:c.[131C>A]; XP_966749.1:c.[81-170C>A]","XP_008196908.1:p.Thr44Asn","LOC655147",655147,null,"655147 [Gene Symbol: LOC655147] [Locus Tag: TcasGA2_TC005588] [Chromosome: LG8] [Map Location: ] [Description: macoilin] [Gene Type: protein-coding]","TcasGA2_TC005588; LOC655147"]
[1195,"NC_007423.3","11004028..11004029","MNV","GG","CA","Heterozygous",37,50,74,1,11,32,0.26,38.33,43,56,13,23,2.21,0.66,0.78,"no","complex","No",1,200,"XP_001807778.1:c.315_316delCCinsTG","XP_001807778.1:p.Leu106Val","LOC100142430",100142430,null,"100142430 [Gene Symbol: LOC100142430] [Locus Tag: TcasGA2_TC005585] [Chromosome: LG8] [Map Location: ] [Description: DNA polymerase alpha subunit B] [Gene Type: protein-coding]","TcasGA2_TC005585; LOC100142430"]
[1198,"NC_007423.3",11061756,"SNV","G","C","Heterozygous",13,30,43.33,1,9,9,0.5,38.08,18,40,6,8,2.01,0.65,1,"no","C/G","No",1,95.95,"XP_967920.2:c.380C>G","XP_967920.2:p.Thr127Ser","LOC656286",656286,null,"656286 [Gene Symbol: LOC656286] [Locus Tag: TcasGA2_TC005579] [Chromosome: LG8] [Map Location: ] [Description: protein atonal homolog 8] [Gene Type: protein-coding]","LOC656286; TcasGA2_TC005579"]
[1199,"NC_007423.3",11126686,"SNV","T","C","Homozygous",28,28,100,1,5,23,0.18,38.07,28,28,9,18,null,1,1,"no","C/C","No",1,104.94,"XP_968547.1:c.910A>G","XP_968547.1:p.Ile304Val","LOC656961",656961,null,"656961 [Gene Symbol: LOC656961] [Locus Tag: TcasGA2_TC005572] [Chromosome: LG8] [Map Location: ] [Description: TGF-beta activated kinase 1] [Gene Type: protein-coding]","Tak1; TcasGA2_TC005572; LOC656961"]
[1201,"NC_007423.3",11129502,"SNV","A","G","Homozygous",35,35,100,1,9,26,0.26,36.83,35,35,8,19,null,1,1,"no","G/G","No",1,126.02,"XP_008196925.1:c.577T>C","XP_008196925.1:p.Phe193Leu","LOC103314006",103314006,null,"103314006 [Gene Symbol: LOC103314006] [Locus Tag: TcasGA2_TC005571] [Chromosome: LG8] [Map Location: ] [Description: prohormone-2] [Gene Type: protein-coding]","TcasGA2_TC005571; LOC103314006"]
[1202,"NC_007423.3",11208133,"SNV","C","G","Homozygous",22,22,100,1,11,12,0.48,38.32,23,23,5,19,null,1,1,"no","G/G","No",1,86.9,"XP_008196927.2:c.[1328G>C]; XP_015838304.1:c.[1313G>C]","XP_008196927.2:p.[Ser443Thr]; XP_015838304.1:p.[Ser438Thr]","LOC657431",657431,null,"657431 [Gene Symbol: LOC657431] [Locus Tag: TcasGA2_TC005566] [Chromosome: LG8] [Map Location: ] [Description: runt-related transcription factor 2] [Gene Type: protein-coding]","LOC657431; TcasGA2_TC005566"]
[1203,"NC_007423.3",11257274,"SNV","C","T","Homozygous",20,20,100,1,4,17,0.19,37.6,21,21,8,10,null,1,1,"no","T/T","No",1,82.52,"XP_969277.1:c.1031C>T","XP_969277.1:p.Ala344Val","LOC657742",657742,null,"657742 [Gene Symbol: LOC657742] [Locus Tag: TcasGA2_TC006542] [Chromosome: LG8] [Map Location: ] [Description: runt] [Gene Type: protein-coding]","TcasGA2_TC006542; LOC657742; run"]
[1205,"NC_007423.3",11391860,"SNV","T","A","Homozygous",20,20,100,1,14,12,0.46,36.6,26,26,12,16,null,1,1,"no","A/A","No",1,82.49,"XP_970808.1:c.[3018A>T]; XP_015838194.1:c.[3018A>T]; XP_008196944.1:c.[3018A>T]; XP_008196943.1:c.[3018A>T]","XP_970808.1:p.[Glu1006Asp]; XP_015838194.1:p.[Glu1006Asp]; XP_008196944.1:p.[Glu1006Asp]; XP_008196943.1:p.[Glu1006Asp]","LOC659406",659406,null,"659406 [Gene Symbol: LOC659406] [Locus Tag: TcasGA2_TC005555] [Chromosome: LG8] [Map Location: ] [Description: protein brunelleschi] [Gene Type: protein-coding]","LOC659406; TcasGA2_TC005555"]
[1206,"NC_007423.3",11398541,"SNV","C","T","Homozygous",20,20,100,1,15,8,0.35,38.35,23,23,7,14,null,1,1,"no","T/T","No",1,82.52,"XP_008196945.1:c.47C>T","XP_008196945.1:p.Ser16Leu","LOC103314014",103314014,null,"103314014 [Gene Symbol: LOC103314014] [Locus Tag: TcasGA2_TC006556] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314014; TcasGA2_TC006556"]
[1207,"NC_007423.3",11398543,"SNV","G","A","Homozygous",23,23,100,1,18,8,0.31,38.26,26,26,8,16,null,1,1,"no","A/A","No",1,91.52,"XP_008196945.1:c.49G>A","XP_008196945.1:p.Gly17Ser","LOC103314014",103314014,null,"103314014 [Gene Symbol: LOC103314014] [Locus Tag: TcasGA2_TC006556] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314014; TcasGA2_TC006556"]
[1208,"NC_007423.3",11403707,"SNV","G","C","Homozygous",26,26,100,1,13,16,0.45,37.92,29,29,11,14,null,1,1,"no","C/C","No",1,98.94,"XP_008196946.1:c.683C>G","XP_008196946.1:p.Ala228Gly","LOC660251, LOC659804","660251 , 659804",null,"660251 [Gene Symbol: LOC660251] [Locus Tag: TcasGA2_TC006562] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660251] [Gene Type: protein-coding] || 659804 [Gene Symbol: LOC659804] [Locus Tag: TcasGA2_TC005552] [Chromosome: LG8] [Map Location: ] [Description: WW domain-binding protein 2] [Gene Type: protein-coding]","LOC660251; TcasGA2_TC006562 || LOC659804; TcasGA2_TC005552"]
[1209,"NC_007423.3","11406227..11406228","MNV","CT","TC","Homozygous",23,23,100,1,13,12,0.48,37.48,25,25,12,14,null,1,1,"no","TC/TC","No",1,200,"XP_971233.1:c.1149_1150delAGinsGA","XP_971233.1:p.Gly384Ser","LOC660251, LOC659873","660251 , 659873",null,"660251 [Gene Symbol: LOC660251] [Locus Tag: TcasGA2_TC006562] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660251] [Gene Type: protein-coding] || 659873 [Gene Symbol: LOC659873] [Locus Tag: TcasGA2_TC005551] [Chromosome: LG8] [Map Location: ] [Description: cell cycle checkpoint protein RAD17] [Gene Type: protein-coding]","LOC660251; TcasGA2_TC006562 || TcasGA2_TC005551; LOC659873"]
[1210,"NC_007423.3",11439128,"SNV","A","G","Homozygous",31,31,100,1,18,15,0.45,36.29,33,33,11,17,null,1,1,"no","G/G","No",1,113.98,"XP_008196951.1:c.803A>G","XP_008196951.1:p.Asn268Ser","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1211,"NC_007423.3",11439182,"SNV","C","G","Heterozygous",16,32,50,1,16,0,0,37.75,16,32,6,10,0.15,0.18,0.04,"no","C/G","No",1,125.55,"XP_008196951.1:c.857C>G","XP_008196951.1:p.Ala286Gly","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1212,"NC_007423.3",11439189,"SNV","C","G","Heterozygous",17,35,48.57,1,17,0,0,37.88,17,35,7,10,1.24,0.13,0.03,"no","C/G","No",1,132.63,"XP_008196951.1:c.864C>G","XP_008196951.1:p.Asn288Lys","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1213,"NC_007423.3","11439210..11439211","MNV","GT","CC","Heterozygous",16,33,48.48,1,16,0,0,38.06,16,33,7,9,2.14,0.12,0.02,"no","complex","No",1,200,"XP_008196951.1:c.885_886delGTinsCC","XP_008196951.1:p.Tyr296His","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1214,"NC_007423.3",11439221,"SNV","A","T","Heterozygous",14,35,40,1,3,11,0.21,37.5,14,35,4,7,0,0.36,0.27,"no","A/T","No",1,98.53,"XP_008196951.1:c.896A>T","XP_008196951.1:p.Tyr299Phe","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1217,"NC_007423.3",11439352,"SNV","C","G","Homozygous",28,28,100,1,5,23,0.18,39.21,28,28,14,15,null,1,1,"no","G/G","No",1,104.96,"XP_008196951.1:c.1027C>G","XP_008196951.1:p.Gln343Glu","LOC103314015",103314015,null,"103314015 [Gene Symbol: LOC103314015] [Locus Tag: TcasGA2_TC006565] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006565; LOC103314015"]
[1222,"NC_007423.3",11499682,"SNV","G","A","Homozygous",21,21,100,1,4,17,0.19,38.57,21,21,8,12,null,1,1,"no","A/A","No",1,85.5,"XP_972237.1:c.751G>A","XP_972237.1:p.Val251Met","LOC660950",660950,null,"660950 [Gene Symbol: LOC660950] [Locus Tag: TcasGA2_TC006572] [Chromosome: LG8] [Map Location: ] [Description: pickpocket protein 28] [Gene Type: protein-coding]","TcasGA2_TC006572; LOC660950"]
[1223,"NC_007423.3",11600216,"SNV","A","G","Homozygous",20,20,100,1,14,9,0.39,39.05,23,23,8,11,null,1,1,"no","G/G","No",1,80.88,"XP_008196967.1:c.910A>G","XP_008196967.1:p.Thr304Ala","LOC661518",661518,null,"661518 [Gene Symbol: LOC661518] [Locus Tag: TcasGA2_TC006582] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized protein DDB_G0290685] [Gene Type: protein-coding]","TcasGA2_TC006582; LOC661518"]
[1224,"NC_007423.3","11605523..11605524","MNV","TG","CT","Homozygous",21,21,100,1,15,13,0.46,37.29,28,28,13,20,null,1,1,"no","CT/CT","No",1,200,"XP_972853.1:c.509_510delCAinsAG","XP_972853.1:p.Thr170Lys","LOC661609",661609,null,"661609 [Gene Symbol: LOC661609] [Locus Tag: TcasGA2_TC005538] [Chromosome: LG8] [Map Location: ] [Description: THO complex subunit 5 homolog] [Gene Type: protein-coding]","LOC661609; TcasGA2_TC005538"]
[1225,"NC_007423.3",11605537,"SNV","T","C","Homozygous",23,23,100,1,17,13,0.43,36.96,30,30,10,16,null,1,1,"no","C/C","No",1,89.91,"XP_972853.1:c.496A>G","XP_972853.1:p.Lys166Glu","LOC661609",661609,null,"661609 [Gene Symbol: LOC661609] [Locus Tag: TcasGA2_TC005538] [Chromosome: LG8] [Map Location: ] [Description: THO complex subunit 5 homolog] [Gene Type: protein-coding]","LOC661609; TcasGA2_TC005538"]
[1227,"NC_007423.3",11724492,"SNV","G","A","Homozygous",20,20,100,1,18,2,0.1,37.25,20,20,6,16,null,1,1,"no","A/A","No",1,82.49,"XP_008196970.1:c.175G>A","XP_008196970.1:p.Ala59Thr","LOC103314027",103314027,null,"103314027 [Gene Symbol: LOC103314027] [Locus Tag: TcasGA2_TC006588] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006588; LOC103314027"]
[1228,"NC_007423.3",11724584,"SNV","G","A","Homozygous",23,23,100,1,4,19,0.17,37.83,23,23,7,12,null,1,1,"no","A/A","No",1,91.52,"XP_008196970.1:c.223G>A","XP_008196970.1:p.Asp75Asn","LOC103314027",103314027,null,"103314027 [Gene Symbol: LOC103314027] [Locus Tag: TcasGA2_TC006588] [Chromosome: LG8] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","TcasGA2_TC006588; LOC103314027"]
[1229,"NC_007423.3",11733246,"SNV","T","C","Homozygous",20,20,100,1,12,14,0.46,37,26,26,13,12,null,1,1,"no","C/C","No",1,80.88,"XP_008196971.1:c.1969A>G","XP_008196971.1:p.Ile657Val","LOC662098",662098,null,"662098 [Gene Symbol: LOC662098] [Locus Tag: TcasGA2_TC005530] [Chromosome: LG8] [Map Location: ] [Description: ATPase family AAA domain-containing protein 5] [Gene Type: protein-coding]","TcasGA2_TC005530; LOC662098"]
[1230,"NC_007423.3","11764063..11764064","MNV","TT","CC","Homozygous",30,30,100,1,18,16,0.47,35.74,34,34,15,23,null,1,1,"no","CC/CC","No",1,200,"XP_008196973.1:c.29_30delTTinsCC","XP_008196973.1:p.Leu10Pro","LOC103314029",103314029,null,"103314029 [Gene Symbol: LOC103314029] [Locus Tag: TcasGA2_TC006598] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314029] [Gene Type: protein-coding]","TcasGA2_TC006598; LOC103314029"]
[1231,"NC_007423.3",11764078,"SNV","C","T","Homozygous",30,30,100,1,18,17,0.49,35.17,35,35,14,18,null,1,1,"no","T/T","No",1,112.62,"XP_008196973.1:c.44C>T","XP_008196973.1:p.Ala15Val","LOC103314029",103314029,null,"103314029 [Gene Symbol: LOC103314029] [Locus Tag: TcasGA2_TC006598] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314029] [Gene Type: protein-coding]","TcasGA2_TC006598; LOC103314029"]
[1233,"NC_007423.3",11939803,"SNV","T","G","Homozygous",21,21,100,1,5,21,0.19,37.29,26,26,6,7,null,1,1,"no","G/G","No",1,83.89,"XP_008197004.1:c.[176-12063A>C]; XP_008197002.1:c.[202A>C]; XP_015838328.1:c.[176-12063A>C]; XP_974339.1:c.[202A>C]; XP_008197006.1:c.[32-12063A>C]; XP_015838325.1:c.[99+4160T>G]; XP_008197008.1:c.[99+4160T>G]","XP_008197002.1:p.[Thr68Pro]; XP_974339.1:p.[Thr68Pro]","LOC103314036, LOC663161, LOC663188","103314036 , 663161 , 663188",null,"103314036 [Gene Symbol: LOC103314036] [Locus Tag: TcasGA2_TC006608] [Chromosome: LG8] [Map Location: ] [Description: G-protein coupled receptor 161] [Gene Type: protein-coding] || 663161 [Gene Symbol: LOC663161] [Locus Tag: TcasGA2_TC005507] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC663161] [Gene Type: protein-coding] || 663188 [Gene Symbol: LOC663188] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: sialin-like] [Gene Type: protein-coding]","TcasGA2_TC006608; LOC103314036 || TcasGA2_TC005507; LOC663161 || LOC663188"]
[1236,"NC_007423.3",11987512,"SNV","A","G","Homozygous",27,27,100,1,20,8,0.29,36.74,28,28,10,14,null,1,1,"no","G/G","No",1,101.94,"XP_015838332.1:c.[64A>G]; XP_015838330.1:c.[153-132A>G]; XP_015838333.1:c.[267-132A>G]; XP_015838329.1:c.[228-132A>G]; XP_008197014.1:c.[267-132A>G]; XP_015838334.1:c.[142-1143A>G]; XP_015838336.1:c.[127-1143A>G]; XP_015838331.1:c.[147-132A>G]; XP_008197010.1:c.[267-132A>G]; XP_008197009.1:c.[267-132A>G]; XP_015838335.1:c.[142-1143A>G]","XP_015838332.1:p.Met22Val","LOC663340",663340,null,"663340 [Gene Symbol: LOC663340] [Locus Tag: TcasGA2_TC006614] [Chromosome: LG8] [Map Location: ] [Description: NAD kinase] [Gene Type: protein-coding]","LOC663340; TcasGA2_TC006614"]
[1237,"NC_007423.3",12092879,"SNV","G","C","Heterozygous",13,21,61.9,1,5,9,0.36,37.31,14,23,5,8,1.85,0.47,0.98,"no","C/G","No",1,56.89,"XP_015838352.1:c.[947C>G]; XP_015838358.1:c.[392-4728G>C]","XP_015838352.1:p.Thr316Ser","LOC103314078, LOC103314076, LOC655790","103314078 , 103314076 , 655790",null,"103314078 [Gene Symbol: LOC103314078] [Locus Tag: TcasGA2_TC006627] [Chromosome: LG8] [Map Location: ] [Description: replication factor C subunit 5] [Gene Type: protein-coding] || 103314076 [Gene Symbol: LOC103314076] [Locus Tag: TcasGA2_TC005500] [Chromosome: LG8] [Map Location: ] [Description: carboxypeptidase M] [Gene Type: protein-coding] || 655790 [Gene Symbol: LOC655790] [Locus Tag: TcasGA2_TC005499] [Chromosome: LG8] [Map Location: ] [Description: esterase B1] [Gene Type: protein-coding]","LOC103314078; TcasGA2_TC006627 || LOC103314076; TcasGA2_TC005500 || LOC655790; TcasGA2_TC005499"]
[1238,"NC_007423.3",12097657,"SNV","C","A","Heterozygous",9,24,37.5,1,9,0,0,38.22,9,25,1,9,-0.15,0.37,0.62,"no","A/C","No",1,56.28,"XP_008197182.1:c.[58C>A]; XP_015838358.1:c.[442C>A]; XP_015838359.1:c.[70C>A]","XP_008197182.1:p.[His20Asn]; XP_015838358.1:p.[His148Asn]; XP_015838359.1:p.[His24Asn]","LOC103314078",103314078,null,"103314078 [Gene Symbol: LOC103314078] [Locus Tag: TcasGA2_TC006627] [Chromosome: LG8] [Map Location: ] [Description: replication factor C subunit 5] [Gene Type: protein-coding]","LOC103314078; TcasGA2_TC006627"]
[1239,"NC_007423.3",12160181,"SNV","T","C","Homozygous",20,20,100,1,20,5,0.2,37.2,25,25,6,11,null,1,1,"no","C/C","No",1,80.88,"XP_008197196.2:c.811A>G","XP_008197196.2:p.Ser271Gly","LOC657120",657120,null,"657120 [Gene Symbol: LOC657120] [Locus Tag: TcasGA2_TC005490] [Chromosome: LG8] [Map Location: ] [Description: sialin] [Gene Type: protein-coding]","LOC657120; TcasGA2_TC005490"]
[1240,"NC_007423.3",12189280,"SNV","C","G","Heterozygous",15,24,62.5,1,12,13,0.48,35.6,25,34,8,6,-3.19,0.66,1,"no","C/G","No",1,61.57,"XP_015838438.1:c.[459G>C]; XP_015838437.1:c.[459G>C]","XP_015838438.1:p.[Leu153Phe]; XP_015838437.1:p.[Leu153Phe]","LOC657512",657512,null,"657512 [Gene Symbol: LOC657512] [Locus Tag: TcasGA2_TC005487] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter] [Gene Type: protein-coding]","TcasGA2_TC005487; LOC657512"]
[1241,"NC_007423.3","12201161..12201162","MNV","GG","AA","Heterozygous",10,24,41.67,1,7,3,0.3,35,10,24,3,7,-3.09,0.26,0.59,"no","complex","No",1,200,"XP_008197203.1:c.[302_303delGGinsAA]; XP_969207.1:c.[302_303delGGinsAA]","XP_008197203.1:p.[Gly101Glu]; XP_969207.1:p.[Gly101Glu]","LOC657667",657667,null,"657667 [Gene Symbol: LOC657667] [Locus Tag: TcasGA2_TC034145] [Chromosome: LG8] [Map Location: ] [Description: sodium-independent sulfate anion transporter-like] [Gene Type: protein-coding]","LOC657667; TcasGA2_TC034145"]
[1242,"NC_007423.3",12209857,"SNV","G","A","Heterozygous",10,22,45.45,1,6,4,0.4,38.6,10,23,2,6,2.11,0.23,0.4,"no","A/G","No",1,79.12,"XP_969352.1:c.287C>T","XP_969352.1:p.Ala96Val","LOC657824",657824,null,"657824 [Gene Symbol: LOC657824] [Locus Tag: TcasGA2_TC005486] [Chromosome: LG8] [Map Location: ] [Description: 39S ribosomal protein L12, mitochondrial] [Gene Type: protein-coding]","LOC657824; TcasGA2_TC005486"]
[1244,"NC_007423.3",12239917,"SNV","A","G","Homozygous",20,20,100,1,15,5,0.25,38.75,20,20,8,14,null,1,1,"no","G/G","No",1,80.88,"XP_008197208.1:c.263T>C","XP_008197208.1:p.Leu88Pro","LOC103314086",103314086,null,"103314086 [Gene Symbol: LOC103314086] [Locus Tag: TcasGA2_TC005483] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC103314086] [Gene Type: protein-coding]","LOC103314086; TcasGA2_TC005483"]
[1245,"NC_007423.3",12462105,"SNV","C","T","Homozygous",20,21,95.24,1,18,6,0.25,36.85,24,25,9,9,null,0.97,1,"no","T/T","No",1,52.13,"XP_015838317.1:c.119C>T","XP_015838317.1:p.Ala40Val","LOC107398521",107398521,null,"107398521 [Gene Symbol: LOC107398521] [Locus Tag: TcasGA2_TC006646] [Chromosome: LG8] [Map Location: ] [Description: cuticle protein 18.7-like] [Gene Type: protein-coding]","LOC107398521; TcasGA2_TC006646"]
[1247,"NC_007423.3",12668433,"SNV","T","A","Heterozygous",13,21,61.9,1,9,4,0.31,39.77,13,21,3,10,null,0.05,0.98,"no","A/C","No",1,59.87,"XP_971761.1:c.249A>T","XP_971761.1:p.Glu83Asp","LOC660437",660437,null,"660437 [Gene Symbol: LOC660437] [Locus Tag: TcasGA2_TC005468] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC660437] [Gene Type: protein-coding]","LOC660437; TcasGA2_TC005468"]
[1248,"NC_007423.3",12682359,"SNV","A","C","Homozygous",26,26,100,1,18,17,0.49,36.54,35,35,9,20,null,1,1,"no","C/C","No",1,98.94,"XP_971928.3:c.[888+2052T>G]; XP_976350.1:c.[817A>C]","XP_976350.1:p.Thr273Pro","LOC660619, LOC660559","660619 , 660559",null,"660619 [Gene Symbol: LOC660619] [Locus Tag: TcasGA2_TC005465] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase S6KL] [Gene Type: protein-coding] || 660559 [Gene Symbol: LOC660559] [Locus Tag: TcasGA2_TC006664] [Chromosome: LG8] [Map Location: ] [Description: pollen-specific leucine-rich repeat extensin-like protein 1] [Gene Type: protein-coding]","TcasGA2_TC005465; LOC660619 || LOC660559; TcasGA2_TC006664"]
[1249,"NC_007423.3",12690339,"SNV","T","C","Homozygous",20,20,100,1,13,10,0.43,39.1,23,23,10,12,null,1,1,"no","C/C","No",1,80.88,"XP_971928.3:c.74A>G","XP_971928.3:p.Glu25Gly","LOC660619",660619,null,"660619 [Gene Symbol: LOC660619] [Locus Tag: TcasGA2_TC005465] [Chromosome: LG8] [Map Location: ] [Description: serine/threonine-protein kinase S6KL] [Gene Type: protein-coding]","TcasGA2_TC005465; LOC660619"]
[1250,"NC_007423.3",12712759,"SNV","C","T","Homozygous",25,26,96.15,1,9,17,0.35,36.12,26,27,8,14,null,1,1,"no","T/T","No",1,68.84,"XP_972187.1:c.632C>T","XP_972187.1:p.Ala211Val","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1251,"NC_007423.3",12712774,"SNV","G","C","Homozygous",26,27,96.3,1,9,21,0.3,36.12,30,31,9,14,null,1,1,"no","C/C","No",1,67.7,"XP_972187.1:c.647G>C","XP_972187.1:p.Ser216Thr","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1252,"NC_007423.3",12712795,"SNV","C","T","Homozygous",25,26,96.15,1,4,23,0.15,38.2,27,28,8,8,null,1,1,"no","T/T","No",1,68.4,"XP_972187.1:c.668C>T","XP_972187.1:p.Ala223Val","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1253,"NC_007423.3",12712804,"SNV","G","C","Homozygous",24,25,96,1,6,21,0.22,37.67,27,28,9,10,null,1,1,"no","C/C","No",1,63.5,"XP_972187.1:c.677G>C","XP_972187.1:p.Ser226Thr","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1254,"NC_007423.3",12712821,"SNV","A","T","Homozygous",29,30,96.67,1,11,21,0.34,36.59,32,33,10,14,null,1,1,"no","T/T","No",1,79.35,"XP_972187.1:c.694A>T","XP_972187.1:p.Ser232Cys","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1255,"NC_007423.3",12712827,"SNV","A","G","Homozygous",21,21,100,1,11,13,0.46,38.1,24,24,8,12,null,1,1,"no","G/G","No",1,83.89,"XP_972187.1:c.700A>G","XP_972187.1:p.Met234Val","LOC660897",660897,null,"660897 [Gene Symbol: LOC660897] [Locus Tag: TcasGA2_TC006667] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006667; LOC660897"]
[1256,"NC_007423.3",12716984,"SNV","T","A","Homozygous",30,30,100,1,25,10,0.29,35.37,35,35,16,21,null,1,1,"no","A/A","No",1,112.58,"XP_972238.1:c.601T>A","XP_972238.1:p.Cys201Ser","LOC660951",660951,null,"660951 [Gene Symbol: LOC660951] [Locus Tag: TcasGA2_TC006668] [Chromosome: LG8] [Map Location: ] [Description: facilitated trehalose transporter Tret1] [Gene Type: protein-coding]","TcasGA2_TC006668; LOC660951"]
[1259,"NC_007423.3",12785539,"SNV","C","G","Homozygous",21,21,100,1,10,14,0.42,39.38,24,24,8,12,null,1,1,"no","G/G","No",1,83.89,"XP_015838367.1:c.[2640G>C]; XP_015838370.1:c.[2637G>C]; XP_008197261.1:c.[2616G>C]; XP_015838369.1:c.[2640G>C]; XP_015838372.1:c.[2586G>C]; XP_015838371.1:c.[2589G>C]; XP_015838373.1:c.[2640G>C]","XP_015838367.1:p.[Lys880Asn]; XP_015838370.1:p.[Lys879Asn]; XP_008197261.1:p.[Lys872Asn]; XP_015838369.1:p.[Lys880Asn]; XP_015838372.1:p.[Lys862Asn]; XP_015838371.1:p.[Lys863Asn]; XP_015838373.1:p.[Lys880Asn]","LOC661858",661858,null,"661858 [Gene Symbol: LOC661858] [Locus Tag: TcasGA2_TC005459] [Chromosome: LG8] [Map Location: ] [Description: prominin-like protein] [Gene Type: protein-coding]","LOC661858; TcasGA2_TC005459"]
[1260,"NC_007423.3",12811930,"SNV","C","T","Homozygous",21,21,100,1,13,10,0.43,36.86,23,23,12,12,null,1,1,"no","T/T","No",1,85.53,"XP_973168.1:c.1348G>A","XP_973168.1:p.Ala450Thr","LOC661945",661945,null,"661945 [Gene Symbol: LOC661945] [Locus Tag: TcasGA2_TC005457] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC661945] [Gene Type: protein-coding]","TcasGA2_TC005457; LOC661945"]
[1261,"NC_007423.3",12848194,"SNV","T","C","Homozygous",24,24,100,1,12,17,0.41,37.42,29,29,6,11,null,1,1,"no","C/C","No",1,92.92,"XP_015838318.1:c.4723T>C","XP_015838318.1:p.Tyr1575His","LOC100142606",100142606,null,"100142606 [Gene Symbol: LOC100142606] [Locus Tag: TcasGA2_TC006681] [Chromosome: LG8] [Map Location: LG8|LG8] [Description: uncharacterized LOC100142606] [Gene Type: protein-coding]","LOC100142606; TcasGA2_TC006681"]
[1262,"NC_007423.3",12906647,"SNV","C","G","Homozygous",30,30,100,1,5,25,0.17,39.4,30,30,6,9,null,1,1,"no","G/G","No",1,110.97,"XP_008197272.1:c.4500G>C","XP_008197272.1:p.Glu1500Asp","LOC662491",662491,null,"662491 [Gene Symbol: LOC662491] [Locus Tag: TcasGA2_TC005448] [Chromosome: LG8] [Map Location: ] [Description: mediator of RNA polymerase II transcription subunit 13] [Gene Type: protein-coding]","LOC662491; TcasGA2_TC005448"]
[1263,"NC_007423.3",13077160,"SNV","T","C","Homozygous",20,20,100,1,12,13,0.48,36.85,25,25,7,11,null,1,1,"no","C/C","No",1,80.88,"XP_008197282.1:c.[946T>C]; XP_008197281.1:c.[990T>C]; XP_974056.2:c.[990T>C]","XP_008197282.1:p.[Ser316Pro]","LOC662889",662889,null,"662889 [Gene Symbol: LOC662889] [Locus Tag: TcasGA2_TC006701] [Chromosome: LG8] [Map Location: ] [Description: ubiquitin carboxyl-terminal hydrolase nonstop] [Gene Type: protein-coding]","TcasGA2_TC006701; LOC662889"]
[1264,"NC_007423.3",13099554,"SNV","C","T","Heterozygous",13,21,61.9,1,6,9,0.4,40.15,15,26,5,7,1.45,0.74,0.99,"no","C/T","No",1,58.15,"NP_001161783.1:c.986G>A","NP_001161783.1:p.Gly329Glu","Y-1",662975,"yellow-1","662975 [Gene Symbol: Y-1] [Locus Tag: TcasGA2_TC005444] [Chromosome: LG8] [Map Location: ] [Description: yellow-1] [Gene Type: protein-coding]","TcasGA2_TC005444; Y-1"]
[1265,"NC_007423.3",13160474,"SNV","T","A","Homozygous",21,21,100,1,8,18,0.31,38.76,26,26,9,11,null,1,1,"no","A/A","No",1,85.5,"XP_974340.1:c.721A>T","XP_974340.1:p.Thr241Ser","LOC663189",663189,null,"663189 [Gene Symbol: LOC663189] [Locus Tag: TcasGA2_TC005440] [Chromosome: LG8] [Map Location: ] [Description: putative inorganic phosphate cotransporter] [Gene Type: protein-coding]","LOC663189; TcasGA2_TC005440"]
[1266,"NC_007423.3",13197784,"SNV","T","G","Homozygous",27,27,100,1,6,21,0.22,39.07,27,27,8,13,null,1,1,"no","G/G","No",1,101.95,"XP_008197350.1:c.[502A>C]; XP_015838535.1:c.[502A>C]; XP_001809245.1:c.[494+102A>C]","XP_008197350.1:p.[Lys168Gln]; XP_015838535.1:p.[Lys168Gln]","LOC100141967",100141967,null,"100141967 [Gene Symbol: LOC100141967] [Locus Tag: TcasGA2_TC005433] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100141967] [Gene Type: protein-coding]","LOC100141967; TcasGA2_TC005433"]
[1267,"NC_007423.3",13220067,"SNV","C","G","Heterozygous",9,24,37.5,1,9,8,0.47,35,17,34,2,2,-2.41,0.04,0.99,"no","C/G","No",1,61.34,"XP_015838505.1:c.[698G>C]; XP_015838508.1:c.[13-3870C>G]","XP_015838505.1:p.Ser233Thr","LOC655221, LOC655077","655221 , 655077",null,"655221 [Gene Symbol: LOC655221] [Locus Tag: TcasGA2_TC006713] [Chromosome: LG8] [Map Location: ] [Description: protein yippee-like 2] [Gene Type: protein-coding] || 655077 [Gene Symbol: LOC655077] [Locus Tag: TcasGA2_TC005432] [Chromosome: LG8] [Map Location: ] [Description: cathepsin B precursor] [Gene Type: protein-coding]","LOC655221; TcasGA2_TC006713 || LOC655077; TcasGA2_TC005432"]
[1268,"NC_007423.3",13220118,"SNV","C","T","Heterozygous",8,20,40,1,4,5,0.44,36.12,9,23,4,7,-1.77,0.59,0.73,"no","C/T","No",1,59.31,"XP_015838505.1:c.[647G>A]; XP_015838508.1:c.[13-3819C>T]","XP_015838505.1:p.Ser216Asn","LOC655221, LOC655077","655221 , 655077",null,"655221 [Gene Symbol: LOC655221] [Locus Tag: TcasGA2_TC006713] [Chromosome: LG8] [Map Location: ] [Description: protein yippee-like 2] [Gene Type: protein-coding] || 655077 [Gene Symbol: LOC655077] [Locus Tag: TcasGA2_TC005432] [Chromosome: LG8] [Map Location: ] [Description: cathepsin B precursor] [Gene Type: protein-coding]","LOC655221; TcasGA2_TC006713 || LOC655077; TcasGA2_TC005432"]
[1270,"NC_007423.3",13350729,"SNV","G","A","Heterozygous",14,26,53.85,1,10,4,0.29,37.71,14,26,7,10,-0.51,0.11,0.85,"no","A/G","No",1,95.23,"XP_015838445.1:c.2711G>A","XP_015838445.1:p.Arg904Gln","LOC656371",656371,null,"656371 [Gene Symbol: LOC656371] [Locus Tag: TcasGA2_TC006721] [Chromosome: LG8] [Map Location: ] [Description: myb-like protein X] [Gene Type: protein-coding]","LOC656371; TcasGA2_TC006721"]
[1271,"NC_007423.3",13426877,"SNV","A","G","Heterozygous",11,26,42.31,1,6,7,0.46,37.45,13,28,4,8,-2.54,0.82,1,"no","A/G","No",1,82.48,"XP_015838512.1:c.5609A>G","XP_015838512.1:p.Asn1870Ser","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1272,"NC_007423.3",13430358,"SNV","A","T","Heterozygous",16,25,64,1,6,14,0.3,36,20,32,7,8,-1.9,0.89,1,"no","A/T","No",1,58.16,"XP_015838512.1:c.8882A>T","XP_015838512.1:p.Glu2961Val","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1273,"NC_007423.3",13430940,"SNV","G","C","Homozygous",26,26,100,1,16,20,0.44,38,36,36,9,14,null,1,1,"no","C/C","No",1,98.94,"XP_015838512.1:c.9464G>C","XP_015838512.1:p.Ser3155Thr","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1274,"NC_007423.3",13430946,"SNV","A","G","Homozygous",26,26,100,1,15,20,0.43,37.08,35,35,9,14,null,1,1,"no","G/G","No",1,98.93,"XP_015838512.1:c.9470A>G","XP_015838512.1:p.Gln3157Arg","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1275,"NC_007423.3",13431636,"SNV","A","G","Homozygous",22,22,100,1,13,13,0.5,38.45,26,26,12,10,null,1,1,"no","G/G","No",1,86.89,"XP_015838512.1:c.10160A>G","XP_015838512.1:p.Gln3387Arg","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1276,"NC_007423.3",13433916,"SNV","T","C","Homozygous",29,29,100,1,10,22,0.31,37.41,32,32,14,17,null,1,1,"no","C/C","No",1,107.97,"XP_015838512.1:c.12440T>C","XP_015838512.1:p.Leu4147Pro","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1277,"NC_007423.3",13433987,"SNV","G","A","Heterozygous",14,22,63.64,1,10,8,0.44,35.93,18,26,5,10,-2.05,0.74,1,"no","A/G","No",1,55.31,"XP_015838512.1:c.12511G>A","XP_015838512.1:p.Asp4171Asn","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1278,"NC_007423.3",13436043,"SNV","A","G","Heterozygous",13,21,61.9,1,10,12,0.45,37.46,22,30,8,10,-0.07,0.47,1,"no","A/G","No",1,56.53,"XP_015838512.1:c.14468A>G","XP_015838512.1:p.His4823Arg","LOC100142107",100142107,null,"100142107 [Gene Symbol: LOC100142107] [Locus Tag: TcasGA2_TC006727] [Chromosome: LG8] [Map Location: ] [Description: uncharacterized LOC100142107] [Gene Type: protein-coding]","LOC100142107; TcasGA2_TC006727"]
[1279,"NC_007423.3",13441001,"SNV","G","C","Heterozygous",10,21,47.62,1,4,6,0.4,36.1,10,21,5,5,-1.34,0.34,0.59,"no","C/G","No",1,82.47,"XP_968623.1:c.746C>G","XP_968623.1:p.Thr249Ser","LOC657042",657042,null,"657042 [Gene Symbol: LOC657042] [Locus Tag: TcasGA2_TC005421] [Chromosome: LG8] [Map Location: ] [Description: nucleolar complex protein 2 homolog] [Gene Type: protein-coding]","LOC657042; TcasGA2_TC005421"]
[1280,"NC_007423.3",13444131,"SNV","A","G","Homozygous",31,32,96.88,1,15,30,0.33,37.9,45,46,8,11,null,0.96,1,"no","G/G","No",1,86.99,"XP_968692.2:c.[1616A>G]; XP_008197361.1:c.[1535A>G]","XP_968692.2:p.[Asn539Ser]; XP_008197361.1:p.[Asn512Ser]","LOC657121",657121,null,"657121 [Gene Symbol: LOC657121] [Locus Tag: TcasGA2_TC006728] [Chromosome: LG8] [Map Location: ] [Description: ribonuclease Z, mitochondrial] [Gene Type: protein-coding]","TcasGA2_TC006728; LOC657121"]
[1284,"NC_007423.3","13513264..13513265","MNV","TC","CT","Heterozygous",20,25,80,1,7,14,0.33,36.67,21,26,9,11,1.49,0.91,1,"no","complex","No",1,200,"XP_008197365.1:c.12_13delGAinsAG","XP_008197365.1:p.Thr5Ala","LOC103312110",103312110,null,"103312110 [Gene Symbol: LOC103312110] [Locus Tag: ] [Chromosome: LG8] [Map Location: ] [Description: beta-glucuronidase-like] [Gene Type: protein-coding]","LOC103312110"]
[1287,"NC_007423.3",13684246,"SNV","G","A","Homozygous",24,24,100,1,24,0,0,38.21,24,24,6,16,null,1,1,"no","A/A","No",1,94.52,"XP_970464.1:c.515C>T","XP_970464.1:p.Ala172Val","LOC659115, LOC659032","659115 , 659032",null,"659115 [Gene Symbol: LOC659115] [Locus Tag: TcasGA2_TC006745] [Chromosome: LG8] [Map Location: ] [Description: charged multivesicular body protein 6-B] [Gene Type: protein-coding] || 659032 [Gene Symbol: LOC659032] [Locus Tag: TcasGA2_TC005405] [Chromosome: LG8] [Map Location: ] [Description: exosome complex component RRP40] [Gene Type: protein-coding]","TcasGA2_TC006745; LOC659115 || LOC659032; TcasGA2_TC005405"]
[1291,"NC_007423.3",13783101,"SNV","C","T","Heterozygous",9,21,42.86,1,5,7,0.42,36.44,12,24,3,5,1.21,0.29,1,"no","C/T","No",1,69.29,"XP_008197389.1:c.[4151C>T]; XP_008197390.1:c.[3596C>T]","XP_008197389.1:p.[Pro1384Leu]; XP_008197390.1:p.[Pro1199Leu]","LOC660002",660002,null,"660002 [Gene Symbol: LOC660002] [Locus Tag: TcasGA2_TC006755] [Chromosome: LG8] [Map Location: ] [Description: tuberin] [Gene Type: protein-coding]","TSC2; LOC660002; TcasGA2_TC006755"]
[1294,"NC_007423.3","13841275..13841276","MNV","CA","TG","Homozygous",23,23,100,1,19,11,0.37,37.41,30,30,11,21,null,1,1,"no","TG/TG","No",1,200,"XP_008197521.1:c.603_604delCAinsTG","XP_008197521.1:p.Ile202Val","LOC103314156",103314156,null,"103314156 [Gene Symbol: LOC103314156] [Locus Tag: TcasGA2_TC006762] [Chromosome: LG8] [Map Location: ] [Description: leucine-rich repeat-containing protein 15] [Gene Type: protein-coding]","TcasGA2_TC006762; LOC103314156"]
[1295,"NC_007423.3",13954813,"SNV","T","C","Homozygous",20,20,100,1,1,20,0.05,37.55,21,21,7,9,null,1,1,"no","C/C","No",1,80.88,"NP_001164202.1:c.830A>G","NP_001164202.1:p.Asn277Ser","HEX3",661859,"hexamerin 3","661859 [Gene Symbol: HEX3] [Locus Tag: TcasGA2_TC005374] [Chromosome: LG8] [Map Location: ] [Description: hexamerin 3] [Gene Type: protein-coding]","TcasGA2_TC005374; HEX3"]
[1296,"NC_007423.3",14011139,"SNV","G","A","Homozygous",20,20,100,1,12,11,0.48,35.05,23,23,9,12,null,1,1,"no","A/A","No",1,79.49,"XP_008197428.1:c.[214C>T]; XP_015838510.1:c.[214C>T]; XP_973379.2:c.[214C>T]","XP_008197428.1:p.[His72Tyr]; XP_015838510.1:p.[His72Tyr]; XP_973379.2:p.[His72Tyr]","LOC662169",662169,null,"662169 [Gene Symbol: LOC662169] [Locus Tag: TcasGA2_TC005369] [Chromosome: LG8] [Map Location: ] [Description: cyclin-dependent kinase-like 4] [Gene Type: protein-coding]","TcasGA2_TC005369; LOC662169"]
[1297,"NC_007423.3",14316540,"SNV","C","A","Heterozygous",9,24,37.5,1,9,0,0,40.11,9,29,2,6,2.03,0.06,0.35,"no","A/C","No",1,56.26,"XP_974237.2:c.[204G>T]; XP_008197456.1:c.[180G>T]; XP_008197454.1:c.[204G>T]; XP_008197455.1:c.[204G>T]; XP_008197457.1:c.[66G>T]; XP_015838468.1:c.[147G>T]; XP_008197458.1:c.[66G>T]","XP_974237.2:p.[Gln68His]; XP_008197456.1:p.[Gln60His]; XP_008197454.1:p.[Gln68His]; XP_008197455.1:p.[Gln68His]; XP_008197457.1:p.[Gln22His]; XP_015838468.1:p.[Gln49His]; XP_008197458.1:p.[Gln22His]","LOC663083",663083,null,"663083 [Gene Symbol: LOC663083] [Locus Tag: TcasGA2_TC005341] [Chromosome: LG8] [Map Location: ] [Description: protein alan shepard] [Gene Type: protein-coding]","TcasGA2_TC005341; LOC663083"]
[1298,"NC_007424.3",183597,"SNV","C","A","Homozygous",27,27,100,1,18,14,0.44,38.59,32,32,13,15,null,1,1,"no","A/A","No",1,103.55,"XP_008191527.1:c.6605G>T","XP_008191527.1:p.Cys2202Phe","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1299,"NC_007424.3",186171,"SNV","C","T","Homozygous",27,27,100,1,10,23,0.3,36.48,33,33,14,15,null,1,1,"no","T/T","No",1,103.58,"XP_008191527.1:c.6157G>A","XP_008191527.1:p.Val2053Ile","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1300,"NC_007424.3",186182,"SNV","G","A","Homozygous",24,24,100,1,11,19,0.37,37.46,30,30,11,15,null,1,1,"no","A/A","No",1,94.52,"XP_008191527.1:c.6146C>T","XP_008191527.1:p.Thr2049Ile","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1301,"NC_007424.3","194858..194859","MNV","TG","CC","Homozygous",21,23,91.3,1,4,17,0.19,39.88,21,23,5,11,null,0.9,0.95,"no","CC/CC","No",1,200,"XP_008191527.1:c.183_184delCAinsGG","XP_008191527.1:p.Ile62Val","LOC656784",656784,null,"656784 [Gene Symbol: LOC656784] [Locus Tag: TcasGA2_TC012221] [Chromosome: LG9] [Map Location: ] [Description: huntingtin] [Gene Type: protein-coding]","LOC656784; TcasGA2_TC012221"]
[1303,"NC_007424.3",1404637,"SNV","A","G","Homozygous",21,21,100,1,11,12,0.48,37.05,23,23,8,13,null,1,1,"no","G/G","No",1,83.89,"XP_015838591.1:c.124A>G","XP_015838591.1:p.Ile42Val","LOC655964",655964,null,"655964 [Gene Symbol: LOC655964] [Locus Tag: TcasGA2_TC001942] [Chromosome: LG9] [Map Location: ] [Description: dynactin subunit 2] [Gene Type: protein-coding]","Dctn2; p50; LOC655964; TcasGA2_TC001942"]
[1304,"NC_007424.3",2263690,"SNV","T","A","Heterozygous",10,29,34.48,1,5,8,0.38,37.4,13,34,6,6,0.21,0.91,1,"no","A/T","No",1,59.78,"XP_015838609.1:c.[477A>T]; XP_015838611.1:c.[477A>T]; XP_015838608.1:c.[477A>T]; XP_008200943.1:c.[477A>T]","XP_015838609.1:p.[Leu159Phe]; XP_015838611.1:p.[Leu159Phe]; XP_015838608.1:p.[Leu159Phe]; XP_008200943.1:p.[Leu159Phe]","LOC103315043",103315043,null,"103315043 [Gene Symbol: LOC103315043] [Locus Tag: TcasGA2_TC005211] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103315043] [Gene Type: protein-coding]","LOC103315043; TcasGA2_TC005211"]
[1305,"NC_007424.3",2861824,"SNV","A","G","Homozygous",21,21,100,1,16,9,0.36,37.29,25,25,13,15,null,1,1,"no","G/G","No",1,83.89,"XP_015838621.1:c.[1813A>G]; XP_015838620.1:c.[1813A>G]; XP_015838619.1:c.[1813A>G]","XP_015838621.1:p.[Thr605Ala]; XP_015838620.1:p.[Thr605Ala]; XP_015838619.1:p.[Thr605Ala]","LOC103314397",103314397,null,"103314397 [Gene Symbol: LOC103314397] [Locus Tag: TcasGA2_TC031231] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314397] [Gene Type: protein-coding]","TcasGA2_TC031231; LOC103314397"]
[1306,"NC_007424.3",3406042,"SNV","G","A","Heterozygous",8,20,40,1,7,1,0.12,39.38,8,23,4,2,2.39,0.06,0.34,"no","complex","No",1,200,"XP_008199629.1:c.[659C>T]; NP_001035796.1:c.[611C>T]; XP_008199630.1:c.[644C>T]","XP_008199629.1:p.[Ala220Val]; NP_001035796.1:p.[Ala204Val]; XP_008199630.1:p.[Ala215Val]","Tert",658162,"telomerase reverse transcriptase","658162 [Gene Symbol: Tert] [Locus Tag: TcasGA2_TC010963] [Chromosome: LG9] [Map Location: ] [Description: telomerase reverse transcriptase] [Gene Type: protein-coding]","Tert; TcasGA2_TC010963"]
[1307,"NC_007424.3",3406043,"SNV","C","T","Heterozygous",5,22,22.73,1,5,3,0.38,36.6,8,25,3,5,-1.45,0.85,0.98,"no","complex","No",1,106.87,"XP_008199629.1:c.[658G>A]; XP_008199630.1:c.[643G>A]; NP_001035796.1:c.[610G>A]","XP_008199629.1:p.[Ala220Thr]; XP_008199630.1:p.[Ala215Thr]; NP_001035796.1:p.[Ala204Thr]","Tert",658162,"telomerase reverse transcriptase","658162 [Gene Symbol: Tert] [Locus Tag: TcasGA2_TC010963] [Chromosome: LG9] [Map Location: ] [Description: telomerase reverse transcriptase] [Gene Type: protein-coding]","Tert; TcasGA2_TC010963"]
[1309,"NC_007424.3",3747223,"SNV","T","G","Homozygous",23,23,100,1,4,22,0.15,38.09,26,26,8,7,null,1,1,"no","G/G","No",1,89.91,"XP_008197593.1:c.[848T>G]; XP_008197592.1:c.[899T>G]","XP_008197593.1:p.[Met283Arg]; XP_008197592.1:p.[Met300Arg]","LOC103314180",103314180,null,"103314180 [Gene Symbol: LOC103314180] [Locus Tag: TcasGA2_TC012280] [Chromosome: LG9] [Map Location: ] [Description: histone-lysine N-methyltransferase 2D] [Gene Type: protein-coding]","TcasGA2_TC012280; LOC103314180"]
[1311,"NC_007424.3",3883626,"SNV","C","T","Homozygous",39,39,100,1,13,28,0.32,37.64,41,41,11,19,null,1,1,"no","T/T","No",1,139.77,"XP_015838796.1:c.[1280C>T]; XP_015838795.1:c.[1375C>T]","XP_015838796.1:p.[Ala427Val]","LOC661612",661612,null,"661612 [Gene Symbol: LOC661612] [Locus Tag: TcasGA2_TC012297] [Chromosome: LG9] [Map Location: ] [Description: 5-hydroxytryptamine receptor] [Gene Type: protein-coding]","LOC661612; TcasGA2_TC012297"]
[1312,"NC_007424.3",3886737,"SNV","C","G","Heterozygous",8,22,36.36,1,0,8,0,40.5,8,25,2,2,2.05,0.03,0.08,"no","C/G","No",1,54.1,"XP_001814302.2:c.735C>G","XP_001814302.2:p.Asn245Lys","LOC100141808",100141808,null,"100141808 [Gene Symbol: LOC100141808] [Locus Tag: TcasGA2_TC012298] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100141808] [Gene Type: protein-coding]","LOC100141808; TcasGA2_TC012298"]
[1313,"NC_007424.3",3903147,"SNV","G","T","Homozygous",31,31,100,1,5,31,0.14,39.97,36,36,10,16,null,1,1,"no","T/T","No",1,115.61,"XP_008197571.1:c.525G>T","XP_008197571.1:p.Met175Ile","LOC661903",661903,null,"661903 [Gene Symbol: LOC661903] [Locus Tag: TcasGA2_TC012300] [Chromosome: LG9] [Map Location: ] [Description: nucleotide exchange factor SIL1] [Gene Type: protein-coding]","LOC661903; TcasGA2_TC012300"]
[1314,"NC_007424.3",3975286,"SNV","T","G","Homozygous",26,26,100,1,14,14,0.5,36.31,28,28,10,13,null,1,1,"no","G/G","No",1,98.93,"NP_001164246.1:c.1521A>C","NP_001164246.1:p.Gln507His","LOC662353",662353,"epsin-like protein","662353 [Gene Symbol: LOC662353] [Locus Tag: TcasGA2_TC012168] [Chromosome: LG9] [Map Location: ] [Description: epsin-like protein] [Gene Type: protein-coding]","TcasGA2_TC012168; LOC662353; GLEAN_12168"]
[1315,"NC_007424.3",3994133,"SNV","C","A","Homozygous",30,30,100,1,19,12,0.39,38.7,31,31,11,20,null,1,1,"no","A/A","No",1,112.57,"XP_015838644.1:c.1267C>A","XP_015838644.1:p.Leu423Ile","LOC662526",662526,null,"662526 [Gene Symbol: LOC662526] [Locus Tag: TcasGA2_TC012309] [Chromosome: LG9] [Map Location: ] [Description: glycogen debranching enzyme] [Gene Type: protein-coding]","TcasGA2_TC012309; LOC662526"]
[1316,"NC_007424.3",4009882,"SNV","G","T","Homozygous",21,21,100,1,17,6,0.26,38.52,23,23,7,12,null,1,1,"no","T/T","No",1,85.53,"XP_008197602.1:c.1130G>T","XP_008197602.1:p.Arg377Met","LOC662592",662592,null,"662592 [Gene Symbol: LOC662592] [Locus Tag: TcasGA2_TC012311] [Chromosome: LG9] [Map Location: ] [Description: Williams-Beuren syndrome chromosomal region 16 protein homolog] [Gene Type: protein-coding]","TcasGA2_TC012311; LOC662592"]
[1317,"NC_007424.3",4046645,"SNV","T","C","Homozygous",20,20,100,1,13,11,0.46,35.9,24,24,8,11,null,1,1,"no","C/C","No",1,80.87,"XP_015838661.1:c.[1211T>C]; XP_008197605.1:c.[1211T>C]; XP_008197604.1:c.[1211T>C]; XP_974005.1:c.[1211T>C]","XP_015838661.1:p.[Val404Ala]; XP_008197605.1:p.[Val404Ala]; XP_008197604.1:p.[Val404Ala]; XP_974005.1:p.[Val404Ala]","LOC662835",662835,null,"662835 [Gene Symbol: LOC662835] [Locus Tag: TcasGA2_TC012312] [Chromosome: LG9] [Map Location: ] [Description: phosphoglucomutase-2] [Gene Type: protein-coding]","TcasGA2_TC012312; LOC662835"]
[1318,"NC_007424.3",4078542,"SNV","G","A","Homozygous",21,21,100,1,6,15,0.29,38.19,21,21,6,15,null,1,1,"no","A/A","No",1,85.5,"XP_008197619.1:c.502G>A","XP_008197619.1:p.Val168Ile","LOC103314184",103314184,null,"103314184 [Gene Symbol: LOC103314184] [Locus Tag: TcasGA2_TC034252] [Chromosome: LG9] [Map Location: ] [Description: endothelial lipase-like] [Gene Type: protein-coding]","LOC103314184; TcasGA2_TC034252"]
[1320,"NC_007424.3",4447971,"SNV","C","T","Homozygous",26,26,100,1,19,11,0.37,36.92,30,30,11,22,null,1,1,"no","T/T","No",1,100.57,"XP_008197394.1:c.[845C>T]; XP_008197388.1:c.[845C>T]","XP_008197394.1:p.[Pro282Leu]; XP_008197388.1:p.[Pro282Leu]","LOC658603",658603,null,"658603 [Gene Symbol: LOC658603] [Locus Tag: TcasGA2_TC012205] [Chromosome: LG9] [Map Location: ] [Description: MICAL-like protein 1] [Gene Type: protein-coding]","TcasGA2_TC012205; LOC658603"]
[1321,"NC_007424.3",4626523,"SNV","G","A","Homozygous",20,20,100,1,2,18,0.1,39.1,20,20,6,8,null,1,1,"no","A/A","No",1,82.49,"XP_008197333.1:c.878G>A","XP_008197333.1:p.Ser293Asn","LOC103314112",103314112,null,"103314112 [Gene Symbol: LOC103314112] [Locus Tag: TcasGA2_TC012213] [Chromosome: LG9] [Map Location: ] [Description: PIH1 domain-containing protein 1] [Gene Type: protein-coding]","LOC103314112; TcasGA2_TC012213"]
[1322,"NC_007424.3",5036154,"SNV","A","G","Homozygous",21,21,100,1,8,21,0.28,38.24,29,29,8,13,null,1,1,"no","G/G","No",1,83.89,"XP_008197643.1:c.[1777A>G]; XP_008197642.1:c.[1777A>G]","XP_008197643.1:p.[Thr593Ala]; XP_008197642.1:p.[Thr593Ala]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1323,"NC_007424.3",5036665,"SNV","G","C","Homozygous",21,21,100,1,6,20,0.23,37.86,26,26,13,12,null,1,1,"no","C/C","No",1,83.89,"XP_008197643.1:c.[2288G>C]; XP_008197642.1:c.[2288G>C]","XP_008197643.1:p.[Ser763Thr]; XP_008197642.1:p.[Ser763Thr]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1324,"NC_007424.3",5037337,"SNV","G","A","Heterozygous",15,23,65.22,1,15,2,0.12,36.07,17,25,6,13,-0.19,0.45,0.33,"no","A/G","No",1,52.5,"XP_008197643.1:c.[2911G>A]; XP_008197642.1:c.[2911G>A]","XP_008197643.1:p.[Ala971Thr]; XP_008197642.1:p.[Ala971Thr]","LOC103314191",103314191,null,"103314191 [Gene Symbol: LOC103314191] [Locus Tag: TcasGA2_TC012337] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314191] [Gene Type: protein-coding]","LOC103314191; TcasGA2_TC012337"]
[1325,"NC_007424.3",5060989,"SNV","A","C","Homozygous",20,21,95.24,1,10,10,0.5,40.35,20,21,7,8,null,0.94,1,"no","C/C","No",1,53.17,"XP_008197649.1:c.[2880T>G]; XP_008197648.1:c.[2880T>G]","XP_008197649.1:p.[Phe960Leu]; XP_008197648.1:p.[Phe960Leu]","LOC656875",656875,null,"656875 [Gene Symbol: LOC656875] [Locus Tag: TcasGA2_TC012129] [Chromosome: LG9] [Map Location: ] [Description: transport and Golgi organization protein 1] [Gene Type: protein-coding]","TcasGA2_TC012129; LOC656875"]
[1326,"NC_007424.3",5071509,"SNV","G","A","Homozygous",34,34,100,1,4,30,0.12,38.06,34,34,7,11,null,1,1,"no","A/A","No",1,124.61,"XP_968625.1:c.211G>A","XP_968625.1:p.Val71Ile","LOC657044",657044,null,"657044 [Gene Symbol: LOC657044] [Locus Tag: TcasGA2_TC034298] [Chromosome: LG9] [Map Location: ] [Description: probable serine hydrolase] [Gene Type: protein-coding]","LOC657044; TcasGA2_TC034298"]
[1327,"NC_007424.3",5079698,"SNV","C","T","Homozygous",23,23,100,1,11,15,0.42,39.57,26,26,6,13,null,1,1,"no","T/T","No",1,91.54,"XP_008197655.1:c.[983C>T]; XP_008197658.1:c.[983C>T]; XP_008197656.1:c.[983C>T]","XP_008197655.1:p.[Pro328Leu]; XP_008197658.1:p.[Pro328Leu]; XP_008197656.1:p.[Pro328Leu]","LOC657123",657123,null,"657123 [Gene Symbol: LOC657123] [Locus Tag: TcasGA2_TC012341] [Chromosome: LG9] [Map Location: ] [Description: WAS/WASL-interacting protein family member 2] [Gene Type: protein-coding]","LOC657123; TcasGA2_TC012341"]
[1328,"NC_007424.3",5205481,"SNV","G","A","Homozygous",21,21,100,1,20,9,0.31,35.86,29,29,7,14,null,1,1,"no","A/A","No",1,85.5,"XP_966343.1:c.727C>T","XP_966343.1:p.Leu243Phe","LOC656992",656992,null,"656992 [Gene Symbol: LOC656992] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: 4-aminobutyrate aminotransferase, mitochondrial-like] [Gene Type: protein-coding]","LOC656992"]
[1329,"NC_007424.3",5261519,"SNV","G","A","Homozygous",23,23,100,1,18,5,0.22,36.7,23,23,13,16,null,1,1,"no","A/A","No",1,91.52,"XP_015838732.1:c.[4912G>A]; XP_015838724.1:c.[5116G>A]; XP_015838733.1:c.[4909G>A]; XP_015838731.1:c.[4912G>A]; XP_015838728.1:c.[4987G>A]; XP_015838729.1:c.[4858G>A]; XP_015838730.1:c.[4930G>A]; XP_015838726.1:c.[5101G>A]; XP_015838727.1:c.[4996G>A]; XP_015838725.1:c.[5110G>A]; XP_015838734.1:c.[4858G>A]; XP_008197678.1:c.[5095G>A]","XP_015838732.1:p.[Gly1638Ser]; XP_015838724.1:p.[Gly1706Ser]; XP_015838733.1:p.[Gly1637Ser]; XP_015838731.1:p.[Gly1638Ser]; XP_015838728.1:p.[Gly1663Ser]; XP_015838729.1:p.[Gly1620Ser]; XP_015838730.1:p.[Gly1644Ser]; XP_015838726.1:p.[Gly1701Ser]; XP_015838727.1:p.[Gly1666Ser]; XP_015838725.1:p.[Gly1704Ser]; XP_015838734.1:p.[Gly1620Ser]; XP_008197678.1:p.[Gly1699Ser]","Doc, LOC100141654","654492 , 100141654","dorsocross","654492 [Gene Symbol: Doc] [Locus Tag: TcasGA2_TC012346] [Chromosome: LG9] [Map Location: ] [Description: dorsocross] [Gene Type: protein-coding] || 100141654 [Gene Symbol: LOC100141654] [Locus Tag: TcasGA2_TC012347] [Chromosome: LG9] [Map Location: ] [Description: kinase D-interacting substrate of 220 kDa] [Gene Type: protein-coding]","Doc; Tc-doc; TcasGA2_TC012346 || TcasGA2_TC012347; LOC100141654"]
[1331,"NC_007424.3",5481910,"SNV","T","C","Homozygous",20,20,100,1,11,13,0.46,37.2,24,24,13,12,null,1,1,"no","C/C","No",1,80.88,"XP_008197688.1:c.92A>G","XP_008197688.1:p.Asn31Ser","LOC100142216",100142216,null,"100142216 [Gene Symbol: LOC100142216] [Locus Tag: TcasGA2_TC012120] [Chromosome: LG9] [Map Location: ] [Description: proteasome-associated protein ECM29 homolog] [Gene Type: protein-coding]","LOC100142216; TcasGA2_TC012120"]
[1332,"NC_007424.3",5489134,"SNV","C","G","Homozygous",26,26,100,1,15,14,0.48,37.65,29,29,11,19,null,1,1,"no","G/G","No",1,98.93,"XP_008197689.1:c.5021C>G","XP_008197689.1:p.Ala1674Gly","LOC100142008",100142008,null,"100142008 [Gene Symbol: LOC100142008] [Locus Tag: TcasGA2_TC012353] [Chromosome: LG9] [Map Location: ] [Description: mucin-4] [Gene Type: protein-coding]","TcasGA2_TC012353; LOC100142008"]
[1333,"NC_007424.3",5489136,"SNV","C","T","Homozygous",26,26,100,1,14,17,0.45,37.73,31,31,12,18,null,1,1,"no","T/T","No",1,100.57,"XP_008197689.1:c.5023C>T","XP_008197689.1:p.Pro1675Ser","LOC100142008",100142008,null,"100142008 [Gene Symbol: LOC100142008] [Locus Tag: TcasGA2_TC012353] [Chromosome: LG9] [Map Location: ] [Description: mucin-4] [Gene Type: protein-coding]","TcasGA2_TC012353; LOC100142008"]
[1334,"NC_007424.3",5489169,"SNV","A","G","Homozygous",21,21,100,1,8,18,0.31,36.19,26,26,7,14,null,1,1,"no","G/G","No",1,83.89,"XP_008197689.1:c.5056A>G","XP_008197689.1:p.Ser1686Gly","LOC100142008",100142008,null,"100142008 [Gene Symbol: LOC100142008] [Locus Tag: TcasGA2_TC012353] [Chromosome: LG9] [Map Location: ] [Description: mucin-4] [Gene Type: protein-coding]","TcasGA2_TC012353; LOC100142008"]
[1336,"NC_007424.3",5556259,"SNV","G","C","Heterozygous",8,21,38.1,1,6,2,0.25,37.6,8,21,5,5,null,0.13,0.15,"no","complex","No",1,200,"XP_001812598.3:c.630C>G","XP_001812598.3:p.Asp210Glu","LOC100142133",100142133,null,"100142133 [Gene Symbol: LOC100142133] [Locus Tag: TcasGA2_TC012114] [Chromosome: LG9] [Map Location: ] [Description: macro domain-containing protein CT2219] [Gene Type: protein-coding]","TcasGA2_TC012114; LOC100142133"]
[1337,"NC_007424.3","5556259..5556260","MNV","GT","CC","Heterozygous",14,22,63.64,1,1,13,0.07,35.67,14,22,9,6,null,0.32,0.24,"no","complex","No",1,200,"XP_001812598.3:c.629_630delACinsGG","XP_001812598.3:p.Asp210Gly","LOC100142133",100142133,null,"100142133 [Gene Symbol: LOC100142133] [Locus Tag: TcasGA2_TC012114] [Chromosome: LG9] [Map Location: ] [Description: macro domain-containing protein CT2219] [Gene Type: protein-coding]","TcasGA2_TC012114; LOC100142133"]
[1338,"NC_007424.3",5556308,"SNV","C","T","Homozygous",35,35,100,1,17,26,0.4,37.31,43,43,18,20,null,1,1,"no","T/T","No",1,127.65,"XP_001812598.3:c.581G>A","XP_001812598.3:p.Arg194Lys","LOC100142133",100142133,null,"100142133 [Gene Symbol: LOC100142133] [Locus Tag: TcasGA2_TC012114] [Chromosome: LG9] [Map Location: ] [Description: macro domain-containing protein CT2219] [Gene Type: protein-coding]","TcasGA2_TC012114; LOC100142133"]
[1339,"NC_007424.3","5830055..5830056","MNV","AG","GA","Heterozygous",9,21,42.86,1,6,3,0.33,38.44,9,25,2,6,2.45,0.1,0.77,"no","complex","No",1,200,"XP_015838711.1:c.[1394_1395delCTinsTC]; XP_008197729.1:c.[1394_1395delCTinsTC]; XP_015838712.1:c.[1394_1395delCTinsTC]","XP_015838711.1:p.[Pro465Leu]; XP_008197729.1:p.[Pro465Leu]; XP_015838712.1:p.[Pro465Leu]","LOC659540",659540,null,"659540 [Gene Symbol: LOC659540] [Locus Tag: TcasGA2_TC012101] [Chromosome: LG9] [Map Location: ] [Description: acylamino-acid-releasing enzyme] [Gene Type: protein-coding]","LOC659540; TcasGA2_TC012101"]
[1340,"NC_007424.3",6062244,"SNV","T","G","Heterozygous",12,40,30,1,10,5,0.33,35.67,15,50,5,7,0.18,0.22,1,"no","G/T","No",1,63.24,"XP_972040.2:c.670T>G","XP_972040.2:p.Ser224Ala","LOC660740",660740,null,"660740 [Gene Symbol: LOC660740] [Locus Tag: TcasGA2_TC012390] [Chromosome: LG9] [Map Location: ] [Description: atrial natriuretic peptide-converting enzyme] [Gene Type: protein-coding]","TcasGA2_TC012390; LOC660740; H129"]
[1344,"NC_007424.3",6083665,"SNV","G","T","Heterozygous",11,24,45.83,1,4,10,0.29,37.36,14,30,4,9,0.52,0.15,0.81,"no","G/T","No",1,81.67,"XP_972190.1:c.5329G>T","XP_972190.1:p.Ala1777Ser","LOC660900",660900,null,"660900 [Gene Symbol: LOC660900] [Locus Tag: TcasGA2_TC012392] [Chromosome: LG9] [Map Location: ] [Description: CAD protein] [Gene Type: protein-coding]","LOC660900; TcasGA2_TC012392"]
[1346,"NC_007424.3",6825789,"SNV","T","C","Homozygous",21,21,100,1,10,11,0.48,37.67,21,21,9,9,null,1,1,"no","C/C","No",1,83.89,"XP_015838844.1:c.[406A>G]; XP_015838843.1:c.[406A>G]","XP_015838844.1:p.[Ile136Val]; XP_015838843.1:p.[Ile136Val]","LOC655958",655958,null,"655958 [Gene Symbol: LOC655958] [Locus Tag: TcasGA2_TC012064] [Chromosome: LG9] [Map Location: ] [Description: UDP-glucuronosyltransferase 2A3] [Gene Type: protein-coding]","TcasGA2_TC012064; LOC655958"]
[1347,"NC_007424.3",6986535,"SNV","C","G","Homozygous",22,22,100,1,12,14,0.46,39.05,26,26,5,13,null,1,1,"no","G/G","No",1,86.9,"XP_008197803.1:c.7142G>C","XP_008197803.1:p.Gly2381Ala","LOC656538",656538,null,"656538 [Gene Symbol: LOC656538] [Locus Tag: TcasGA2_TC012058] [Chromosome: LG9] [Map Location: ] [Description: helicase domino] [Gene Type: protein-coding]","dom; domino; TcasGA2_TC012058; LOC656538"]
[1349,"NC_007424.3",7104971,"SNV","A","G","Homozygous",26,26,100,1,15,11,0.42,37.38,26,26,7,13,null,1,1,"no","G/G","No",1,98.94,"XP_008197818.1:c.[578A>G]; XP_015838740.1:c.[578A>G]; XP_015838739.1:c.[578A>G]","XP_008197818.1:p.[Glu193Gly]; XP_015838740.1:p.[Glu193Gly]; XP_015838739.1:p.[Glu193Gly]","LOC658227",658227,null,"658227 [Gene Symbol: LOC658227] [Locus Tag: TcasGA2_TC012422] [Chromosome: LG9] [Map Location: ] [Description: ninein] [Gene Type: protein-coding]","LOC658227; TcasGA2_TC012422"]
[1350,"NC_007424.3",7257296,"SNV","C","T","Homozygous",23,23,100,1,14,9,0.39,37.04,23,23,7,16,null,1,1,"no","T/T","No",1,91.55,"XP_008197836.1:c.212C>T","XP_008197836.1:p.Ala71Val","LOC659034",659034,null,"659034 [Gene Symbol: LOC659034] [Locus Tag: TcasGA2_TC012430] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC659034; TcasGA2_TC012430"]
[1351,"NC_007424.3",7257584,"SNV","C","G","Homozygous",22,22,100,1,14,15,0.48,37.95,29,29,13,14,null,1,1,"no","G/G","No",1,86.9,"XP_008197836.1:c.500C>G","XP_008197836.1:p.Thr167Arg","LOC659034",659034,null,"659034 [Gene Symbol: LOC659034] [Locus Tag: TcasGA2_TC012430] [Chromosome: LG9] [Map Location: ] [Description: CAP-Gly domain-containing linker protein 1] [Gene Type: protein-coding]","LOC659034; TcasGA2_TC012430"]
[1352,"NC_007424.3",7917372,"SNV","G","A","Homozygous",21,21,100,1,16,5,0.24,38.29,21,21,7,13,null,1,1,"no","A/A","No",1,85.5,"XP_008199913.1:c.[1091C>T]; XP_968712.2:c.[1091C>T]","XP_008199913.1:p.[Ala364Val]; XP_968712.2:p.[Ala364Val]","LOC657060, LOC657143","657060 , 657143",null,"657060 [Gene Symbol: LOC657060] [Locus Tag: TcasGA2_TC010642] [Chromosome: LG9] [Map Location: ] [Description: complexin] [Gene Type: protein-coding] || 657143 [Gene Symbol: LOC657143] [Locus Tag: TcasGA2_TC010675] [Chromosome: LG9] [Map Location: ] [Description: knickkopf 3] [Gene Type: protein-coding]","LOC657060; TcasGA2_TC010642 || TcasGA2_TC010675; LOC657143"]
[1353,"NC_007424.3",8098758,"SNV","T","C","Homozygous",21,21,100,1,6,17,0.26,37.05,23,23,8,10,null,1,1,"no","C/C","No",1,83.88,"XP_015839006.1:c.[40589A>G]; XP_015838999.1:c.[40547A>G]; XP_015839007.1:c.[30485A>G]; XP_015839002.1:c.[40472A>G]; XP_015839001.1:c.[40514A>G]; XP_015839005.1:c.[40283A>G]; XP_015839008.1:c.[30179A>G]; XP_015838997.1:c.[40562A>G]; XP_015839000.1:c.[40526A>G]; XP_015839004.1:c.[40358A>G]; XP_015838996.1:c.[40574A>G]; XP_015839003.1:c.[40400A>G]; XP_015839010.1:c.[30179A>G]; XP_015838998.1:c.[40589A>G]","XP_015839006.1:p.[Lys13530Arg]; XP_015838999.1:p.[Lys13516Arg]; XP_015839007.1:p.[Lys10162Arg]; XP_015839002.1:p.[Lys13491Arg]; XP_015839001.1:p.[Lys13505Arg]; XP_015839005.1:p.[Lys13428Arg]; XP_015839008.1:p.[Lys10060Arg]; XP_015838997.1:p.[Lys13521Arg]; XP_015839000.1:p.[Lys13509Arg]; XP_015839004.1:p.[Lys13453Arg]; XP_015838996.1:p.[Lys13525Arg]; XP_015839003.1:p.[Lys13467Arg]; XP_015839010.1:p.[Lys10060Arg]; XP_015838998.1:p.[Lys13530Arg]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1355,"NC_007424.3",8101920,"SNV","A","C","Homozygous",35,35,100,1,25,10,0.29,37.43,35,35,9,21,null,1,1,"no","C/C","No",1,126.02,"XP_015839010.1:c.[27017T>G]; XP_015838996.1:c.[37412T>G]; XP_015839008.1:c.[27017T>G]; XP_015839001.1:c.[37352T>G]; XP_015838997.1:c.[37400T>G]; XP_015839004.1:c.[37196T>G]; XP_015839000.1:c.[37364T>G]; XP_015839003.1:c.[37238T>G]; XP_015838998.1:c.[37427T>G]; XP_015839002.1:c.[37310T>G]; XP_015839007.1:c.[27323T>G]; XP_015838999.1:c.[37385T>G]; XP_015839006.1:c.[37427T>G]; XP_015839005.1:c.[37121T>G]","XP_015839010.1:p.[Ile9006Ser]; XP_015838996.1:p.[Ile12471Ser]; XP_015839008.1:p.[Ile9006Ser]; XP_015839001.1:p.[Ile12451Ser]; XP_015838997.1:p.[Ile12467Ser]; XP_015839004.1:p.[Ile12399Ser]; XP_015839000.1:p.[Ile12455Ser]; XP_015839003.1:p.[Ile12413Ser]; XP_015838998.1:p.[Ile12476Ser]; XP_015839002.1:p.[Ile12437Ser]; XP_015839007.1:p.[Ile9108Ser]; XP_015838999.1:p.[Ile12462Ser]; XP_015839006.1:p.[Ile12476Ser]; XP_015839005.1:p.[Ile12374Ser]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1356,"NC_007424.3","8102020..8102021","MNV","TC","CT","Homozygous",29,29,100,1,14,18,0.44,36.76,32,32,13,16,null,1,1,"no","CT/CT","No",1,200,"XP_015839003.1:c.[37137_37138delGAinsAG]; XP_015839002.1:c.[37209_37210delGAinsAG]; XP_015838996.1:c.[37311_37312delGAinsAG]; XP_015839005.1:c.[37020_37021delGAinsAG]; XP_015839001.1:c.[37251_37252delGAinsAG]; XP_015838998.1:c.[37326_37327delGAinsAG]; XP_015839007.1:c.[27222_27223delGAinsAG]; XP_015839006.1:c.[37326_37327delGAinsAG]; XP_015839010.1:c.[26916_26917delGAinsAG]; XP_015838997.1:c.[37299_37300delGAinsAG]; XP_015839000.1:c.[37263_37264delGAinsAG]; XP_015839004.1:c.[37095_37096delGAinsAG]; XP_015838999.1:c.[37284_37285delGAinsAG]; XP_015839008.1:c.[26916_26917delGAinsAG]","XP_015839003.1:p.[Ile12380Val]; XP_015839002.1:p.[Ile12404Val]; XP_015838996.1:p.[Ile12438Val]; XP_015839005.1:p.[Ile12341Val]; XP_015839001.1:p.[Ile12418Val]; XP_015838998.1:p.[Ile12443Val]; XP_015839007.1:p.[Ile9075Val]; XP_015839006.1:p.[Ile12443Val]; XP_015839010.1:p.[Ile8973Val]; XP_015838997.1:p.[Ile12434Val]; XP_015839000.1:p.[Ile12422Val]; XP_015839004.1:p.[Ile12366Val]; XP_015838999.1:p.[Ile12429Val]; XP_015839008.1:p.[Ile8973Val]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1357,"NC_007424.3",8107603,"SNV","T","C","Homozygous",21,21,100,1,10,14,0.42,37.24,24,24,10,12,null,1,1,"no","C/C","No",1,83.89,"XP_015839005.1:c.[32518A>G]; XP_015838996.1:c.[32809A>G]; XP_015839008.1:c.[23422-1218A>G]; XP_015839004.1:c.[32593A>G]; XP_015838997.1:c.[32797A>G]; XP_015838998.1:c.[32824A>G]; XP_015839003.1:c.[32635A>G]; XP_015839007.1:c.[23728-1218A>G]; XP_015839006.1:c.[32824A>G]; XP_015839000.1:c.[32761A>G]; XP_015838999.1:c.[32782A>G]; XP_015839010.1:c.[23422-1218A>G]; XP_015839002.1:c.[32707A>G]; XP_015839001.1:c.[32749A>G]","XP_015839005.1:p.[Ile10840Val]; XP_015838996.1:p.[Ile10937Val]; XP_015839004.1:p.[Ile10865Val]; XP_015838997.1:p.[Ile10933Val]; XP_015838998.1:p.[Ile10942Val]; XP_015839003.1:p.[Ile10879Val]; XP_015839006.1:p.[Ile10942Val]; XP_015839000.1:p.[Ile10921Val]; XP_015838999.1:p.[Ile10928Val]; XP_015839002.1:p.[Ile10903Val]; XP_015839001.1:p.[Ile10917Val]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1358,"NC_007424.3",8108079,"SNV","T","C","Homozygous",23,23,100,1,11,15,0.42,37.7,26,26,10,15,null,1,1,"no","C/C","No",1,89.9,"XP_015839002.1:c.[32231A>G]; XP_015839004.1:c.[32117A>G]; XP_015838996.1:c.[32333A>G]; XP_015839010.1:c.[23422-1694A>G]; XP_015838999.1:c.[32306A>G]; XP_015838998.1:c.[32348A>G]; XP_015839001.1:c.[32273A>G]; XP_015838997.1:c.[32321A>G]; XP_015839007.1:c.[23728-1694A>G]; XP_015839003.1:c.[32159A>G]; XP_015839000.1:c.[32285A>G]; XP_015839006.1:c.[32348A>G]; XP_015839005.1:c.[32042A>G]; XP_015839008.1:c.[23422-1694A>G]","XP_015839002.1:p.[Glu10744Gly]; XP_015839004.1:p.[Glu10706Gly]; XP_015838996.1:p.[Glu10778Gly]; XP_015838999.1:p.[Glu10769Gly]; XP_015838998.1:p.[Glu10783Gly]; XP_015839001.1:p.[Glu10758Gly]; XP_015838997.1:p.[Glu10774Gly]; XP_015839003.1:p.[Glu10720Gly]; XP_015839000.1:p.[Glu10762Gly]; XP_015839006.1:p.[Glu10783Gly]; XP_015839005.1:p.[Glu10681Gly]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1359,"NC_007424.3",8109081,"SNV","T","A","Homozygous",21,21,100,1,14,14,0.5,38.43,28,28,10,17,null,1,1,"no","A/A","No",1,85.5,"XP_015839010.1:c.[23422-2696A>T]; XP_015839005.1:c.[31040A>T]; XP_015839002.1:c.[31229A>T]; XP_015839006.1:c.[31346A>T]; XP_015838998.1:c.[31346A>T]; XP_015838996.1:c.[31331A>T]; XP_015839000.1:c.[31283A>T]; XP_015839008.1:c.[23422-2696A>T]; XP_015839004.1:c.[31115A>T]; XP_015838999.1:c.[31304A>T]; XP_015839007.1:c.[23728-2696A>T]; XP_015839001.1:c.[31271A>T]; XP_015838997.1:c.[31319A>T]; XP_015839003.1:c.[31157A>T]","XP_015839005.1:p.[Gln10347Leu]; XP_015839002.1:p.[Gln10410Leu]; XP_015839006.1:p.[Gln10449Leu]; XP_015838998.1:p.[Gln10449Leu]; XP_015838996.1:p.[Gln10444Leu]; XP_015839000.1:p.[Gln10428Leu]; XP_015839004.1:p.[Gln10372Leu]; XP_015838999.1:p.[Gln10435Leu]; XP_015839001.1:p.[Gln10424Leu]; XP_015838997.1:p.[Gln10440Leu]; XP_015839003.1:p.[Gln10386Leu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1360,"NC_007424.3",8109407,"SNV","G","T","Homozygous",20,20,100,1,18,8,0.31,38.25,26,26,8,13,null,1,1,"no","T/T","No",1,82.52,"XP_015838996.1:c.[31005C>A]; XP_015838998.1:c.[31020C>A]; XP_015839007.1:c.[23728-3022C>A]; XP_015839003.1:c.[30831C>A]; XP_015839005.1:c.[30714C>A]; XP_015839004.1:c.[30789C>A]; XP_015839010.1:c.[23422-3022C>A]; XP_015839002.1:c.[30903C>A]; XP_015838999.1:c.[30978C>A]; XP_015839006.1:c.[31020C>A]; XP_015838997.1:c.[30993C>A]; XP_015839008.1:c.[23422-3022C>A]; XP_015839001.1:c.[30945C>A]; XP_015839000.1:c.[30957C>A]","XP_015838996.1:p.[Asp10335Glu]; XP_015838998.1:p.[Asp10340Glu]; XP_015839003.1:p.[Asp10277Glu]; XP_015839005.1:p.[Asp10238Glu]; XP_015839004.1:p.[Asp10263Glu]; XP_015839002.1:p.[Asp10301Glu]; XP_015838999.1:p.[Asp10326Glu]; XP_015839006.1:p.[Asp10340Glu]; XP_015838997.1:p.[Asp10331Glu]; XP_015839001.1:p.[Asp10315Glu]; XP_015839000.1:p.[Asp10319Glu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1361,"NC_007424.3",8109726,"SNV","A","G","Homozygous",25,25,100,1,20,14,0.41,38.8,34,34,9,17,null,1,1,"no","G/G","No",1,95.93,"XP_015839003.1:c.[30512T>C]; XP_015838999.1:c.[30659T>C]; XP_015838996.1:c.[30686T>C]; XP_015839005.1:c.[30395T>C]; XP_015839000.1:c.[30638T>C]; XP_015839001.1:c.[30626T>C]; XP_015839008.1:c.[23422-3341T>C]; XP_015839007.1:c.[23728-3341T>C]; XP_015839004.1:c.[30470T>C]; XP_015839002.1:c.[30584T>C]; XP_015838997.1:c.[30674T>C]; XP_015838998.1:c.[30701T>C]; XP_015839006.1:c.[30701T>C]; XP_015839010.1:c.[23422-3341T>C]","XP_015839003.1:p.[Leu10171Pro]; XP_015838999.1:p.[Leu10220Pro]; XP_015838996.1:p.[Leu10229Pro]; XP_015839005.1:p.[Leu10132Pro]; XP_015839000.1:p.[Leu10213Pro]; XP_015839001.1:p.[Leu10209Pro]; XP_015839004.1:p.[Leu10157Pro]; XP_015839002.1:p.[Leu10195Pro]; XP_015838997.1:p.[Leu10225Pro]; XP_015838998.1:p.[Leu10234Pro]; XP_015839006.1:p.[Leu10234Pro]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1362,"NC_007424.3",8109850,"SNV","C","T","Homozygous",22,22,100,1,4,18,0.18,37.5,22,22,8,9,null,1,1,"no","T/T","No",1,88.54,"XP_015839006.1:c.[30577G>A]; XP_015839004.1:c.[30346G>A]; XP_015839005.1:c.[30271G>A]; XP_015839010.1:c.[23422-3465G>A]; XP_015839007.1:c.[23728-3465G>A]; XP_015839003.1:c.[30388G>A]; XP_015838998.1:c.[30577G>A]; XP_015839008.1:c.[23422-3465G>A]; XP_015838997.1:c.[30550G>A]; XP_015838996.1:c.[30562G>A]; XP_015839002.1:c.[30460G>A]; XP_015839001.1:c.[30502G>A]; XP_015839000.1:c.[30514G>A]; XP_015838999.1:c.[30535G>A]","XP_015839006.1:p.[Ala10193Thr]; XP_015839004.1:p.[Ala10116Thr]; XP_015839005.1:p.[Ala10091Thr]; XP_015839003.1:p.[Ala10130Thr]; XP_015838998.1:p.[Ala10193Thr]; XP_015838997.1:p.[Ala10184Thr]; XP_015838996.1:p.[Ala10188Thr]; XP_015839002.1:p.[Ala10154Thr]; XP_015839001.1:p.[Ala10168Thr]; XP_015839000.1:p.[Ala10172Thr]; XP_015838999.1:p.[Ala10179Thr]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1363,"NC_007424.3",8116393,"SNV","T","C","Homozygous",22,22,100,1,18,12,0.4,35.86,30,30,10,15,null,1,1,"no","C/C","No",1,86.89,"XP_015838998.1:c.[24034A>G]; XP_015839001.1:c.[23959A>G]; XP_015839007.1:c.[23727+1210A>G]; XP_015839006.1:c.[24034A>G]; XP_015839008.1:c.[23421+1210A>G]; XP_015839004.1:c.[23803A>G]; XP_015838996.1:c.[24019A>G]; XP_015839000.1:c.[24034A>G]; XP_015839005.1:c.[23728A>G]; XP_015838999.1:c.[23992A>G]; XP_015839002.1:c.[23917A>G]; XP_015838997.1:c.[24007A>G]; XP_015839010.1:c.[23421+1210A>G]; XP_015839003.1:c.[23845A>G]","XP_015838998.1:p.[Lys8012Glu]; XP_015839001.1:p.[Lys7987Glu]; XP_015839006.1:p.[Lys8012Glu]; XP_015839004.1:p.[Lys7935Glu]; XP_015838996.1:p.[Lys8007Glu]; XP_015839000.1:p.[Lys8012Glu]; XP_015839005.1:p.[Lys7910Glu]; XP_015838999.1:p.[Lys7998Glu]; XP_015839002.1:p.[Lys7973Glu]; XP_015838997.1:p.[Lys8003Glu]; XP_015839003.1:p.[Lys7949Glu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1364,"NC_007424.3",8116461,"SNV","T","G","Homozygous",20,20,100,1,7,16,0.3,37.75,23,23,5,15,null,1,1,"no","G/G","No",1,80.88,"XP_015838999.1:c.[23924A>C]; XP_015838996.1:c.[23951A>C]; XP_015839007.1:c.[23727+1142A>C]; XP_015838997.1:c.[23939A>C]; XP_015839003.1:c.[23777A>C]; XP_015839000.1:c.[23966A>C]; XP_015839005.1:c.[23660A>C]; XP_015839002.1:c.[23849A>C]; XP_015839001.1:c.[23891A>C]; XP_015839010.1:c.[23421+1142A>C]; XP_015838998.1:c.[23966A>C]; XP_015839004.1:c.[23735A>C]; XP_015839006.1:c.[23966A>C]; XP_015839008.1:c.[23421+1142A>C]","XP_015838999.1:p.[Asp7975Ala]; XP_015838996.1:p.[Asp7984Ala]; XP_015838997.1:p.[Asp7980Ala]; XP_015839003.1:p.[Asp7926Ala]; XP_015839000.1:p.[Asp7989Ala]; XP_015839005.1:p.[Asp7887Ala]; XP_015839002.1:p.[Asp7950Ala]; XP_015839001.1:p.[Asp7964Ala]; XP_015838998.1:p.[Asp7989Ala]; XP_015839004.1:p.[Asp7912Ala]; XP_015839006.1:p.[Asp7989Ala]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1365,"NC_007424.3",8118737,"SNV","T","C","Homozygous",22,22,100,1,2,20,0.09,36,22,22,4,6,null,1,1,"no","C/C","No",1,86.9,"XP_015838997.1:c.[22666A>G]; XP_015838998.1:c.[22693A>G]; XP_015839009.1:c.[22693A>G]; XP_015839008.1:c.[22387A>G]; XP_015838996.1:c.[22678A>G]; XP_015839010.1:c.[22387A>G]; XP_015839003.1:c.[22504A>G]; XP_015839004.1:c.[22462A>G]; XP_015839007.1:c.[22693A>G]; XP_015839002.1:c.[22576A>G]; XP_015839001.1:c.[22618A>G]; XP_015839000.1:c.[22693A>G]; XP_015839005.1:c.[22387A>G]; XP_015838999.1:c.[22651A>G]; XP_015839006.1:c.[22693A>G]; XP_015839011.1:c.[22576A>G]","XP_015838997.1:p.[Ser7556Gly]; XP_015838998.1:p.[Ser7565Gly]; XP_015839009.1:p.[Ser7565Gly]; XP_015839008.1:p.[Ser7463Gly]; XP_015838996.1:p.[Ser7560Gly]; XP_015839010.1:p.[Ser7463Gly]; XP_015839003.1:p.[Ser7502Gly]; XP_015839004.1:p.[Ser7488Gly]; XP_015839007.1:p.[Ser7565Gly]; XP_015839002.1:p.[Ser7526Gly]; XP_015839001.1:p.[Ser7540Gly]; XP_015839000.1:p.[Ser7565Gly]; XP_015839005.1:p.[Ser7463Gly]; XP_015838999.1:p.[Ser7551Gly]; XP_015839006.1:p.[Ser7565Gly]; XP_015839011.1:p.[Ser7526Gly]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1366,"NC_007424.3",8126204,"SNV","A","G","Homozygous",24,24,100,1,18,7,0.28,35.92,25,25,8,19,null,1,1,"no","G/G","No",1,92.91,"XP_015839003.1:c.[19327T>C]; XP_015839000.1:c.[19516T>C]; XP_015839004.1:c.[19285T>C]; XP_015839009.1:c.[19516T>C]; XP_015838997.1:c.[19489T>C]; XP_015839011.1:c.[19399T>C]; XP_015838996.1:c.[19501T>C]; XP_015839001.1:c.[19441T>C]; XP_015839005.1:c.[19210T>C]; XP_015839002.1:c.[19399T>C]; XP_015839007.1:c.[19516T>C]; XP_015839008.1:c.[19210T>C]; XP_015839010.1:c.[19210T>C]; XP_015839006.1:c.[19516T>C]; XP_015838998.1:c.[19516T>C]; XP_015838999.1:c.[19474T>C]","XP_015839003.1:p.[Phe6443Leu]; XP_015839000.1:p.[Phe6506Leu]; XP_015839004.1:p.[Phe6429Leu]; XP_015839009.1:p.[Phe6506Leu]; XP_015838997.1:p.[Phe6497Leu]; XP_015839011.1:p.[Phe6467Leu]; XP_015838996.1:p.[Phe6501Leu]; XP_015839001.1:p.[Phe6481Leu]; XP_015839005.1:p.[Phe6404Leu]; XP_015839002.1:p.[Phe6467Leu]; XP_015839007.1:p.[Phe6506Leu]; XP_015839008.1:p.[Phe6404Leu]; XP_015839010.1:p.[Phe6404Leu]; XP_015839006.1:p.[Phe6506Leu]; XP_015838998.1:p.[Phe6506Leu]; XP_015838999.1:p.[Phe6492Leu]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1368,"NC_007424.3",8136470,"SNV","T","G","Homozygous",20,20,100,1,20,4,0.17,38.2,24,24,9,13,null,1,1,"no","G/G","No",1,80.88,"XP_015839005.1:c.[11787A>C]; XP_015838998.1:c.[12018A>C]; XP_015838999.1:c.[11976A>C]; XP_015838997.1:c.[11991A>C]; XP_015839000.1:c.[12018A>C]; XP_015839010.1:c.[11787A>C]; XP_015839003.1:c.[11829A>C]; XP_015838996.1:c.[12003A>C]; XP_015839008.1:c.[11787A>C]; XP_015839002.1:c.[11976A>C]; XP_015839009.1:c.[12018A>C]; XP_015839007.1:c.[12018A>C]; XP_015839011.1:c.[11976A>C]; XP_015839006.1:c.[12018A>C]; XP_015839004.1:c.[11787A>C]; XP_015839001.1:c.[12018A>C]","XP_015839005.1:p.[Arg3929Ser]; XP_015838998.1:p.[Arg4006Ser]; XP_015838999.1:p.[Arg3992Ser]; XP_015838997.1:p.[Arg3997Ser]; XP_015839000.1:p.[Arg4006Ser]; XP_015839010.1:p.[Arg3929Ser]; XP_015839003.1:p.[Arg3943Ser]; XP_015838996.1:p.[Arg4001Ser]; XP_015839008.1:p.[Arg3929Ser]; XP_015839002.1:p.[Arg3992Ser]; XP_015839009.1:p.[Arg4006Ser]; XP_015839007.1:p.[Arg4006Ser]; XP_015839011.1:p.[Arg3992Ser]; XP_015839006.1:p.[Arg4006Ser]; XP_015839004.1:p.[Arg3929Ser]; XP_015839001.1:p.[Arg4006Ser]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1372,"NC_007424.3","8143399..8143400","MNV","AA","TG","Homozygous",40,40,100,1,34,16,0.32,38.05,50,50,10,24,null,1,1,"no","TG/TG","No",1,200,"XP_015839007.1:c.[5088_5089delTTinsCA]; XP_015838997.1:c.[5061_5062delTTinsCA]; XP_015839008.1:c.[4857_4858delTTinsCA]; XP_015838996.1:c.[5073_5074delTTinsCA]; XP_015839009.1:c.[5088_5089delTTinsCA]; XP_015839001.1:c.[5088_5089delTTinsCA]; XP_015838998.1:c.[5088_5089delTTinsCA]; XP_015838999.1:c.[5046_5047delTTinsCA]; XP_015839011.1:c.[5046_5047delTTinsCA]; XP_015839005.1:c.[4857_4858delTTinsCA]; XP_015839010.1:c.[4857_4858delTTinsCA]; XP_015839000.1:c.[5088_5089delTTinsCA]; XP_015839002.1:c.[5046_5047delTTinsCA]; XP_015839006.1:c.[5088_5089delTTinsCA]; XP_015839003.1:c.[4899_4900delTTinsCA]; XP_015839004.1:c.[4857_4858delTTinsCA]","XP_015839007.1:p.[Cys1697Ser]; XP_015838997.1:p.[Cys1688Ser]; XP_015839008.1:p.[Cys1620Ser]; XP_015838996.1:p.[Cys1692Ser]; XP_015839009.1:p.[Cys1697Ser]; XP_015839001.1:p.[Cys1697Ser]; XP_015838998.1:p.[Cys1697Ser]; XP_015838999.1:p.[Cys1683Ser]; XP_015839011.1:p.[Cys1683Ser]; XP_015839005.1:p.[Cys1620Ser]; XP_015839010.1:p.[Cys1620Ser]; XP_015839000.1:p.[Cys1697Ser]; XP_015839002.1:p.[Cys1683Ser]; XP_015839006.1:p.[Cys1697Ser]; XP_015839003.1:p.[Cys1634Ser]; XP_015839004.1:p.[Cys1620Ser]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1373,"NC_007424.3","8144268..8144269","MNV","GT","AC","Heterozygous",6,21,28.57,1,4,4,0.5,38.5,8,27,5,5,2.05,0.19,0.7,"no","complex","No",1,200,"XP_015839008.1:c.[3988_3989delACinsGT]; XP_015838996.1:c.[4204_4205delACinsGT]; XP_015839003.1:c.[4030_4031delACinsGT]; XP_015839001.1:c.[4219_4220delACinsGT]; XP_015838998.1:c.[4219_4220delACinsGT]; XP_015839004.1:c.[3988_3989delACinsGT]; XP_015839009.1:c.[4219_4220delACinsGT]; XP_015838997.1:c.[4192_4193delACinsGT]; XP_015839010.1:c.[3988_3989delACinsGT]; XP_015839002.1:c.[4177_4178delACinsGT]; XP_015839005.1:c.[3988_3989delACinsGT]; XP_015839006.1:c.[4219_4220delACinsGT]; XP_015839007.1:c.[4219_4220delACinsGT]; XP_015838999.1:c.[4177_4178delACinsGT]; XP_015839000.1:c.[4219_4220delACinsGT]; XP_015839011.1:c.[4177_4178delACinsGT]","XP_015839008.1:p.[Thr1330Val]; XP_015838996.1:p.[Thr1402Val]; XP_015839003.1:p.[Thr1344Val]; XP_015839001.1:p.[Thr1407Val]; XP_015838998.1:p.[Thr1407Val]; XP_015839004.1:p.[Thr1330Val]; XP_015839009.1:p.[Thr1407Val]; XP_015838997.1:p.[Thr1398Val]; XP_015839010.1:p.[Thr1330Val]; XP_015839002.1:p.[Thr1393Val]; XP_015839005.1:p.[Thr1330Val]; XP_015839006.1:p.[Thr1407Val]; XP_015839007.1:p.[Thr1407Val]; XP_015838999.1:p.[Thr1393Val]; XP_015839000.1:p.[Thr1407Val]; XP_015839011.1:p.[Thr1393Val]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1374,"NC_007424.3",8152695,"SNV","A","T","Homozygous",20,20,100,1,9,14,0.39,38.35,23,23,13,13,null,1,1,"no","T/T","No",1,82.52,"XP_015838996.1:c.[1550T>A]; XP_015839009.1:c.[1550T>A]; XP_015839005.1:c.[1334T>A]; XP_015838999.1:c.[1523T>A]; XP_015838997.1:c.[1523T>A]; XP_015839001.1:c.[1550T>A]; XP_015839000.1:c.[1550T>A]; XP_015839006.1:c.[1550T>A]; XP_015838998.1:c.[1550T>A]; XP_015839007.1:c.[1550T>A]; XP_015839004.1:c.[1334T>A]; XP_015839010.1:c.[1334T>A]; XP_015839011.1:c.[1523T>A]; XP_015839002.1:c.[1523T>A]; XP_015839008.1:c.[1334T>A]; XP_015839003.1:c.[1361T>A]","XP_015838996.1:p.[Leu517Gln]; XP_015839009.1:p.[Leu517Gln]; XP_015839005.1:p.[Leu445Gln]; XP_015838999.1:p.[Leu508Gln]; XP_015838997.1:p.[Leu508Gln]; XP_015839001.1:p.[Leu517Gln]; XP_015839000.1:p.[Leu517Gln]; XP_015839006.1:p.[Leu517Gln]; XP_015838998.1:p.[Leu517Gln]; XP_015839007.1:p.[Leu517Gln]; XP_015839004.1:p.[Leu445Gln]; XP_015839010.1:p.[Leu445Gln]; XP_015839011.1:p.[Leu508Gln]; XP_015839002.1:p.[Leu508Gln]; XP_015839008.1:p.[Leu445Gln]; XP_015839003.1:p.[Leu454Gln]","LOC656637",656637,null,"656637 [Gene Symbol: LOC656637] [Locus Tag: TcasGA2_TC010667] [Chromosome: LG9] [Map Location: ] [Description: nesprin-1] [Gene Type: protein-coding]","Msp-300; LOC656637; TcasGA2_TC010667"]
[1375,"NC_007424.3",8296982,"SNV","A","G","Homozygous",21,21,100,1,10,16,0.38,36.19,26,26,7,13,null,1,1,"no","G/G","No",1,83.89,"XP_008199895.1:c.3695T>C","XP_008199895.1:p.Val1232Ala","LOC654954",654954,null,"654954 [Gene Symbol: LOC654954] [Locus Tag: TcasGA2_TC010657] [Chromosome: LG9] [Map Location: ] [Description: disintegrin and metalloproteinase domain-containing protein 12] [Gene Type: protein-coding]","LOC654954; TcasGA2_TC010657"]
[1376,"NC_007424.3",8323316,"SNV","G","A","Heterozygous",9,23,39.13,1,4,5,0.44,37,9,26,6,7,-0.72,0.83,1,"no","A/G","No",1,63.67,"XP_015839243.1:c.[653C>T]; XP_008199895.1:c.[88+2727C>T]","XP_015839243.1:p.Pro218Leu","LOC654954, LOC107398688","654954 , 107398688",null,"654954 [Gene Symbol: LOC654954] [Locus Tag: TcasGA2_TC010657] [Chromosome: LG9] [Map Location: ] [Description: disintegrin and metalloproteinase domain-containing protein 12] [Gene Type: protein-coding] || 107398688 [Gene Symbol: LOC107398688] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC107398688] [Gene Type: protein-coding]","LOC654954; TcasGA2_TC010657 || LOC107398688"]
[1377,"NC_007424.3",8653817,"SNV","G","A","Homozygous",32,32,100,1,25,11,0.31,36.91,36,36,15,18,null,1,1,"no","A/A","No",1,118.6,"XP_008196003.1:c.3557C>T","XP_008196003.1:p.Pro1186Leu","LOC656210",656210,null,"656210 [Gene Symbol: LOC656210] [Locus Tag: TcasGA2_TC012007] [Chromosome: LG9] [Map Location: ] [Description: 205 kDa microtubule-associated protein] [Gene Type: protein-coding]","LOC656210; TcasGA2_TC012007"]
[1378,"NC_007424.3",9218997,"SNV","A","G","Homozygous",21,21,100,1,8,17,0.32,38.05,25,25,11,10,null,1,1,"no","G/G","No",1,83.89,"XP_015839066.1:c.46889T>C","XP_015839066.1:p.Leu15630Pro","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1379,"NC_007424.3",9236761,"SNV","C","T","Homozygous",23,23,100,1,9,14,0.39,37.3,23,23,10,15,null,1,1,"no","T/T","No",1,91.55,"XP_015839066.1:c.31114G>A","XP_015839066.1:p.Gly10372Ser","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1381,"NC_007424.3",9257314,"SNV","A","G","Heterozygous",10,21,47.62,1,8,2,0.2,37.2,10,22,6,3,-0.74,0.12,0.2,"no","A/G","No",1,83.17,"XP_015839066.1:c.13160T>C","XP_015839066.1:p.Leu4387Ser","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1382,"NC_007424.3",9257321,"SNV","A","C","Homozygous",21,21,100,1,9,13,0.41,38.1,22,22,10,7,null,1,1,"no","C/C","No",1,83.88,"XP_015839066.1:c.13153T>G","XP_015839066.1:p.Ser4385Ala","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1383,"NC_007424.3",9262925,"SNV","T","C","Homozygous",25,25,100,1,16,15,0.48,37.76,31,31,13,14,null,1,1,"no","C/C","No",1,92.91,"XP_015839066.1:c.8728A>G","XP_015839066.1:p.Lys2910Glu","LOC658528",658528,null,"658528 [Gene Symbol: LOC658528] [Locus Tag: TcasGA2_TC011986] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC658528] [Gene Type: protein-coding]","LOC658528; TcasGA2_TC011986"]
[1384,"NC_007424.3",9385160,"SNV","G","A","Heterozygous",16,21,76.19,1,11,13,0.46,36.06,24,30,7,10,1.45,0.99,1,"no","complex","No",1,200,"XP_970542.1:c.506C>T","XP_970542.1:p.Thr169Met","LOC659117",659117,null,"659117 [Gene Symbol: LOC659117] [Locus Tag: TcasGA2_TC011978] [Chromosome: LG9] [Map Location: ] [Description: ribosome biogenesis protein BRX1 homolog] [Gene Type: protein-coding]","LOC659117; TcasGA2_TC011978"]
[1386,"NC_007424.3",11065002,"SNV","A","G","Homozygous",31,31,100,1,16,19,0.46,38.29,35,35,14,20,null,1,1,"no","G/G","No",1,113.98,"XP_008197936.1:c.[2191A>G]; XP_015838969.1:c.[1825A>G]; XP_015838968.1:c.[2236A>G]","XP_008197936.1:p.[Thr731Ala]; XP_015838969.1:p.[Thr609Ala]; XP_015838968.1:p.[Thr746Ala]","LOC658305",658305,null,"658305 [Gene Symbol: LOC658305] [Locus Tag: TcasGA2_TC012537] [Chromosome: LG9] [Map Location: ] [Description: mutS protein homolog 5] [Gene Type: protein-coding]","TcasGA2_TC012537; LOC658305"]
[1388,"NC_007424.3","11183463..11183464","MNV","GG","AC","Heterozygous",8,24,33.33,1,5,5,0.5,36.25,10,34,5,6,0.7,0.82,1,"no","complex","No",1,200,"XP_008197991.1:c.1842_1843delGGinsAC","XP_008197991.1:p.Glu615Gln","LOC659036",659036,null,"659036 [Gene Symbol: LOC659036] [Locus Tag: TcasGA2_TC012543] [Chromosome: LG9] [Map Location: ] [Description: rab3 GTPase-activating protein non-catalytic subunit] [Gene Type: protein-coding]","LOC659036; TcasGA2_TC012543"]
[1390,"NC_007424.3",11234527,"SNV","G","T","Homozygous",22,22,100,1,18,8,0.31,37.86,26,26,10,12,null,1,1,"no","T/T","No",1,88.54,"XP_001811274.1:c.688C>A","XP_001811274.1:p.Gln230Lys","LOC100141517",100141517,null,"100141517 [Gene Symbol: LOC100141517] [Locus Tag: TcasGA2_TC011942] [Chromosome: LG9] [Map Location: ] [Description: 4F2 cell-surface antigen heavy chain] [Gene Type: protein-coding]","LOC100141517; TcasGA2_TC011942"]
[1392,"NC_007424.3",11288060,"SNV","A","T","Homozygous",20,20,100,1,7,17,0.29,36.05,24,24,8,10,null,1,1,"no","T/T","No",1,82.52,"XP_015839051.1:c.[1141A>T]; XP_015839050.1:c.[1141A>T]","XP_015839051.1:p.[Ser381Cys]; XP_015839050.1:p.[Ser381Cys]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1393,"NC_007424.3",11310645,"SNV","G","T","Homozygous",23,23,100,1,17,8,0.32,37.7,25,25,8,14,null,1,1,"no","T/T","No",1,91.54,"XP_015839051.1:c.[10307G>T]; XP_015839050.1:c.[10310G>T]","XP_015839051.1:p.[Trp3436Leu]; XP_015839050.1:p.[Trp3437Leu]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1395,"NC_007424.3","11310730..11310731","MNV","GG","CA","Homozygous",22,26,84.62,1,17,7,0.29,35.16,24,28,10,16,1.35,0.98,0.99,"no","CA/CA","No",1,200,"XP_015839050.1:c.[10395_10396delGGinsCA]; XP_015839051.1:c.[10392_10393delGGinsCA]","XP_015839050.1:p.[Ala3466Thr]; XP_015839051.1:p.[Ala3465Thr]","LOC659879",659879,null,"659879 [Gene Symbol: LOC659879] [Locus Tag: TcasGA2_TC012551] [Chromosome: LG9] [Map Location: ] [Description: hemocytin] [Gene Type: protein-coding]","LOC659879; TcasGA2_TC012551"]
[1397,"NC_007424.3",11366665,"SNV","A","T","Heterozygous",16,27,59.26,1,12,4,0.25,37.88,16,27,5,15,-1.85,0.72,0.82,"no","A/T","No",1,78.11,"XP_971487.1:c.8A>T","XP_971487.1:p.Gln3Leu","LOC660134",660134,null,"660134 [Gene Symbol: LOC660134] [Locus Tag: TcasGA2_TC012553] [Chromosome: LG9] [Map Location: ] [Description: translation initiation factor eIF-2B subunit gamma] [Gene Type: protein-coding]","TcasGA2_TC012553; LOC660134"]
[1399,"NC_007424.3",11420224,"SNV","A","T","Homozygous",21,21,100,1,21,0,0,39.1,21,21,9,11,null,1,1,"no","T/T","No",1,85.52,"XP_015839304.1:c.[4159T>A]; XP_015839300.1:c.[4351T>A]; XP_015839301.1:c.[4348T>A]; XP_015839303.1:c.[4309T>A]; XP_015839302.1:c.[4315T>A]","XP_015839304.1:p.[Cys1387Ser]; XP_015839300.1:p.[Cys1451Ser]; XP_015839301.1:p.[Cys1450Ser]; XP_015839303.1:p.[Cys1437Ser]; XP_015839302.1:p.[Cys1439Ser]","LOC660562",660562,null,"660562 [Gene Symbol: LOC660562] [Locus Tag: TcasGA2_TC011933] [Chromosome: LG9] [Map Location: ] [Description: rho GTPase-activating protein 100F] [Gene Type: protein-coding]","LOC660562; TcasGA2_TC011933"]
[1403,"NC_007424.3",11645479,"SNV","G","C","Homozygous",27,27,100,1,10,18,0.36,37.41,28,28,10,16,null,1,1,"no","C/C","No",1,101.94,"XP_973346.2:c.1477C>G","XP_973346.2:p.Arg493Gly","LOC662136",662136,null,"662136 [Gene Symbol: LOC662136] [Locus Tag: TcasGA2_TC011920] [Chromosome: LG9] [Map Location: ] [Description: phosphoacetylglucosamine mutase] [Gene Type: protein-coding]","TcasGA2_TC011920; LOC662136"]
[1404,"NC_007424.3",11660784,"SNV","G","A","Homozygous",20,20,100,1,15,13,0.46,37.1,28,28,11,11,null,1,1,"no","A/A","No",1,82.49,"XP_001813274.1:c.184G>A","XP_001813274.1:p.Gly62Ser","LOC100142149",100142149,null,"100142149 [Gene Symbol: LOC100142149] [Locus Tag: TcasGA2_TC012579] [Chromosome: LG9] [Map Location: ] [Description: caspase Dronc] [Gene Type: protein-coding]","TcasGA2_TC012579; LOC100142149"]
[1405,"NC_007424.3",11845055,"SNV","C","A","Homozygous",22,22,100,1,16,10,0.38,37.18,26,26,5,11,null,1,1,"no","A/A","No",1,88.51,"XP_974163.1:c.867G>T","XP_974163.1:p.Glu289Asp","LOC663003",663003,null,"663003 [Gene Symbol: LOC663003] [Locus Tag: TcasGA2_TC011905] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663003] [Gene Type: protein-coding]","TcasGA2_TC011905; LOC663003"]
[1406,"NC_007424.3",11955436,"SNV","A","G","Homozygous",37,37,100,1,11,32,0.26,35.59,43,43,10,16,null,1,1,"no","G/G","No",1,132.05,"XP_974291.2:c.[2720T>C]; XP_008198080.1:c.[2942T>C]","XP_974291.2:p.[Leu907Pro]; XP_008198080.1:p.[Leu981Pro]","LOC663138",663138,null,"663138 [Gene Symbol: LOC663138] [Locus Tag: TcasGA2_TC030617] [Chromosome: LG9] [Map Location: ] [Description: phosphatidylinositide phosphatase SAC2] [Gene Type: protein-coding]","TcasGA2_TC030617; LOC663138"]
[1407,"NC_007424.3","11966853..11966854","MNV","AC","TG","Homozygous",21,21,100,1,4,21,0.16,38.29,25,25,7,7,null,1,1,"no","TG/TG","No",1,200,"XP_008198081.1:c.1338_1339delACinsTG","XP_008198081.1:p.Pro447Ala","LOC663191",663191,null,"663191 [Gene Symbol: LOC663191] [Locus Tag: TcasGA2_TC012601] [Chromosome: LG9] [Map Location: ] [Description: probable elongator complex protein 2] [Gene Type: protein-coding]","LOC663191; TcasGA2_TC012601"]
[1408,"NC_007424.3",12137539,"SNV","G","A","Heterozygous",13,21,61.9,1,13,0,0,39.38,13,21,1,12,3.77,0.05,1,"no","A/G","No",1,57.9,"XP_974391.1:c.634G>A","XP_974391.1:p.Val212Ile","LOC663241",663241,null,"663241 [Gene Symbol: LOC663241] [Locus Tag: TcasGA2_TC012611] [Chromosome: LG9] [Map Location: ] [Description: dynein assembly factor 3, axonemal homolog] [Gene Type: protein-coding]","TcasGA2_TC012611; LOC663241"]
[1411,"NC_007424.3",12138050,"SNV","T","G","Heterozygous",15,25,60,1,10,7,0.41,36.87,17,27,5,10,-0.92,0.31,0.99,"no","G/T","No",1,66.13,"XP_974391.1:c.1145T>G","XP_974391.1:p.Leu382Trp","LOC663241",663241,null,"663241 [Gene Symbol: LOC663241] [Locus Tag: TcasGA2_TC012611] [Chromosome: LG9] [Map Location: ] [Description: dynein assembly factor 3, axonemal homolog] [Gene Type: protein-coding]","TcasGA2_TC012611; LOC663241"]
[1414,"NC_007424.3","12180271..12180272","MNV","CC","GT","Homozygous",27,27,100,1,22,16,0.42,35.42,38,38,14,21,null,1,1,"no","GT/GT","No",1,200,"XP_015839034.1:c.[1313_1314delCCinsGT]; XP_008198097.1:c.[1313_1314delCCinsGT]; XP_008198094.1:c.[1229_1230delCCinsGT]; XP_015839033.1:c.[1265_1266delCCinsGT]; XP_008198093.1:c.[1313_1314delCCinsGT]; XP_008198098.1:c.[968_969delCCinsGT]; XP_008198092.1:c.[1313_1314delCCinsGT]; XP_008198095.1:c.[1313_1314delCCinsGT]; XP_008198096.1:c.[1313_1314delCCinsGT]","XP_015839034.1:p.[Thr438Ser]; XP_008198097.1:p.[Thr438Ser]; XP_008198094.1:p.[Thr410Ser]; XP_015839033.1:p.[Thr422Ser]; XP_008198093.1:p.[Thr438Ser]; XP_008198098.1:p.[Thr323Ser]; XP_008198092.1:p.[Thr438Ser]; XP_008198095.1:p.[Thr438Ser]; XP_008198096.1:p.[Thr438Ser]","LOC663411",663411,null,"663411 [Gene Symbol: LOC663411] [Locus Tag: TcasGA2_TC012615] [Chromosome: LG9] [Map Location: ] [Description: rho GTPase-activating protein 21-B] [Gene Type: protein-coding]","TcasGA2_TC012615; LOC663411"]
[1416,"NC_007424.3",12193501,"SNV","G","A","Homozygous",20,20,100,1,7,17,0.29,37.85,24,24,8,9,null,1,1,"no","A/A","No",1,82.49,"XP_008198103.1:c.[209G>A]; XP_008198101.1:c.[209G>A]; XP_015839035.1:c.[209G>A]","XP_008198103.1:p.[Ser70Asn]; XP_008198101.1:p.[Ser70Asn]; XP_015839035.1:p.[Ser70Asn]","LOC663427",663427,null,"663427 [Gene Symbol: LOC663427] [Locus Tag: TcasGA2_TC012616] [Chromosome: LG9] [Map Location: ] [Description: receptor-type tyrosine-protein phosphatase N2] [Gene Type: protein-coding]","LOC663427; TcasGA2_TC012616"]
[1417,"NC_007424.3",12250536,"SNV","A","T","Heterozygous",10,20,50,1,6,4,0.4,40.4,10,20,5,4,0.38,0.81,0.96,"no","A/T","No",1,81.86,"XP_974847.2:c.[1852T>A]; XP_015839057.1:c.[1849T>A]","XP_974847.2:p.[Tyr618Asn]; XP_015839057.1:p.[Tyr617Asn]","LOC663720",663720,null,"663720 [Gene Symbol: LOC663720] [Locus Tag: TcasGA2_TC034408] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663720] [Gene Type: protein-coding]","TcasGA2_TC034408; LOC663720"]
[1418,"NC_007424.3",12273887,"SNV","C","A","Homozygous",20,20,100,1,7,15,0.32,36,22,22,10,14,null,1,1,"no","A/A","No",1,82.49,"XP_015838986.1:c.[331C>A]; XP_015838985.1:c.[331C>A]; XP_015838987.1:c.[76C>A]","XP_015838986.1:p.[Gln111Lys]; XP_015838985.1:p.[Gln111Lys]; XP_015838987.1:p.[Gln26Lys]","LOC107398653",107398653,null,"107398653 [Gene Symbol: LOC107398653] [Locus Tag: TcasGA2_TC012629] [Chromosome: LG9] [Map Location: ] [Description: odorant receptor 49a-like] [Gene Type: protein-coding]","TcasGA2_TC012629; LOC107398653"]
[1419,"NC_007424.3",12307726,"SNV","A","G","Homozygous",20,20,100,1,20,4,0.17,38.1,24,24,9,17,null,1,1,"no","G/G","No",1,80.88,"XP_008197944.1:c.311A>G","XP_008197944.1:p.Lys104Arg","LOC103314254",103314254,null,"103314254 [Gene Symbol: LOC103314254] [Locus Tag: TcasGA2_TC012636] [Chromosome: LG9] [Map Location: ] [Description: odorant receptor 76] [Gene Type: protein-coding]","or26; TcasGA2_TC012636; Or76; LOC103314254"]
[1420,"NC_007424.3",12359071,"SNV","G","C","Homozygous",22,22,100,1,19,11,0.37,35.41,30,30,9,11,null,1,1,"no","C/C","No",1,86.9,"XP_008198170.1:c.[862C>G]; XP_015839061.1:c.[144+28047G>C]; XP_015839062.1:c.[144+28047G>C]","XP_008198170.1:p.Pro288Ala","LOC655549, LOC100141926","655549 , 100141926",null,"655549 [Gene Symbol: LOC655549] [Locus Tag: TcasGA2_TC012639] [Chromosome: LG9] [Map Location: ] [Description: nitric oxide synthase, salivary gland] [Gene Type: protein-coding] || 100141926 [Gene Symbol: LOC100141926] [Locus Tag: TcasGA2_TC011871] [Chromosome: LG9] [Map Location: ] [Description: galectin-4] [Gene Type: protein-coding]","LOC655549; TcasGA2_TC012639 || LOC100141926; TcasGA2_TC011871"]
[1421,"NC_007424.3",12531339,"SNV","C","T","Heterozygous",12,30,40,1,12,2,0.14,36.75,14,34,4,9,-0.13,0.03,0.59,"no","C/T","No",1,82.35,"XP_968849.1:c.1082G>A","XP_968849.1:p.Gly361Asp","LOC657517, LOC657288","657517 , 657288",null,"657517 [Gene Symbol: LOC657517] [Locus Tag: TcasGA2_TC012652] [Chromosome: LG9] [Map Location: ] [Description: rho guanine nucleotide exchange factor 10] [Gene Type: protein-coding] || 657288 [Gene Symbol: LOC657288] [Locus Tag: TcasGA2_TC011855] [Chromosome: LG9] [Map Location: ] [Description: serine--pyruvate aminotransferase] [Gene Type: protein-coding]","LOC657517; TcasGA2_TC012652 || LOC657288; TcasGA2_TC011855"]
[1422,"NC_007424.3",12595264,"SNV","T","G","Homozygous",28,28,100,1,17,19,0.47,35.93,36,36,11,12,null,1,1,"no","G/G","No",1,104.96,"XP_969574.1:c.[1032A>C]; XP_008198196.1:c.[1032A>C]","XP_969574.1:p.[Leu344Phe]; XP_008198196.1:p.[Leu344Phe]","LOC658068",658068,null,"658068 [Gene Symbol: LOC658068] [Locus Tag: TcasGA2_TC011849] [Chromosome: LG9] [Map Location: ] [Description: sterol O-acyltransferase 1] [Gene Type: protein-coding]","LOC658068; TcasGA2_TC011849"]
[1425,"NC_007424.3",12684139,"SNV","A","G","Homozygous",22,22,100,1,6,19,0.24,39,25,25,9,13,null,1,1,"no","G/G","No",1,86.9,"XP_008198201.1:c.[86A>G]; XP_970620.1:c.[86A>G]","XP_008198201.1:p.[Asp29Gly]; XP_970620.1:p.[Asp29Gly]","LOC659200",659200,null,"659200 [Gene Symbol: LOC659200] [Locus Tag: TcasGA2_TC012664] [Chromosome: LG9] [Map Location: ] [Description: ran-binding protein 3] [Gene Type: protein-coding]","TcasGA2_TC012664; LOC659200"]
[1426,"NC_007424.3",12809225,"SNV","G","C","Heterozygous",12,21,57.14,1,0,12,0,37.67,12,21,4,5,-1.31,0.4,1,"no","C/G","No",1,69.67,"XP_015839087.1:c.[1505+5467C>G]; XP_971240.2:c.[2927G>C]; XP_015839078.1:c.[2927G>C]; XP_008198218.2:c.[1604+5467C>G]; XP_008198216.1:c.[2921G>C]","XP_971240.2:p.[Cys976Ser]; XP_015839078.1:p.[Cys976Ser]; XP_008198216.1:p.[Cys974Ser]","LOC659943, LOC659880","659943 , 659880",null,"659943 [Gene Symbol: LOC659943] [Locus Tag: TcasGA2_TC011836] [Chromosome: LG9] [Map Location: ] [Description: poly(A)-specific ribonuclease PARN-like domain-containing protein 1] [Gene Type: protein-coding] || 659880 [Gene Symbol: LOC659880] [Locus Tag: TcasGA2_TC012669] [Chromosome: LG9] [Map Location: ] [Description: trafficking protein particle complex subunit 11] [Gene Type: protein-coding]","TcasGA2_TC011836; LOC659943 || LOC659880; TcasGA2_TC012669"]
[1427,"NC_007424.3",13049203,"SNV","G","A","Homozygous",21,21,100,1,15,7,0.32,38,22,22,10,12,null,1,1,"no","A/A","No",1,85.5,"XP_008198233.1:c.583C>T","XP_008198233.1:p.Leu195Phe","LOC660503",660503,null,"660503 [Gene Symbol: LOC660503] [Locus Tag: TcasGA2_TC011830] [Chromosome: LG9] [Map Location: ] [Description: RRP12-like protein] [Gene Type: protein-coding]","LOC660503; TcasGA2_TC011830"]
[1428,"NC_007424.3",13181440,"SNV","A","G","Homozygous",20,20,100,1,9,11,0.45,35.9,20,20,10,11,null,1,1,"no","G/G","No",1,80.87,"XP_015839075.1:c.3821A>G","XP_015839075.1:p.Glu1274Gly","LOC103314298",103314298,null,"103314298 [Gene Symbol: LOC103314298] [Locus Tag: TcasGA2_TC012689] [Chromosome: LG9] [Map Location: ] [Description: rotatin] [Gene Type: protein-coding]","LOC103314298; TcasGA2_TC012689"]
[1430,"NC_007424.3",13328268,"SNV","T","C","Homozygous",20,20,100,1,11,9,0.45,38.3,20,20,8,12,null,1,1,"no","C/C","No",1,80.88,"XP_008198257.1:c.575A>G","XP_008198257.1:p.Lys192Arg","LOC103314318",103314318,null,"103314318 [Gene Symbol: LOC103314318] [Locus Tag: TcasGA2_TC011807] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314318] [Gene Type: protein-coding]","LOC103314318; TcasGA2_TC011807"]
[1431,"NC_007424.3",13363554,"SNV","G","A","Homozygous",29,29,100,1,19,19,0.5,37.59,38,38,10,16,null,1,1,"no","A/A","No",1,106.56,"XP_008198267.1:c.[1745C>T]; XP_008198266.1:c.[1775C>T]; XP_008198265.1:c.[1949C>T]","XP_008198267.1:p.[Thr582Ile]; XP_008198266.1:p.[Thr592Ile]; XP_008198265.1:p.[Thr650Ile]","LOC662355",662355,null,"662355 [Gene Symbol: LOC662355] [Locus Tag: TcasGA2_TC011802] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC662355; TcasGA2_TC011802"]
[1432,"NC_007424.3",13364323,"SNV","C","T","Homozygous",23,23,100,1,12,19,0.39,37.09,31,31,7,12,null,1,1,"no","T/T","No",1,91.55,"XP_008198266.1:c.[1006G>A]; XP_008198265.1:c.[1180G>A]; XP_008198267.1:c.[976G>A]","XP_008198266.1:p.[Val336Ile]; XP_008198265.1:p.[Val394Ile]; XP_008198267.1:p.[Val326Ile]","LOC662355",662355,null,"662355 [Gene Symbol: LOC662355] [Locus Tag: TcasGA2_TC011802] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC662355; TcasGA2_TC011802"]
[1433,"NC_007424.3",13388296,"SNV","G","T","Homozygous",24,24,100,1,6,18,0.25,38.92,24,24,4,8,null,1,1,"no","T/T","No",1,94.55,"XP_973581.1:c.159C>A","XP_973581.1:p.His53Gln","LOC662390",662390,null,"662390 [Gene Symbol: LOC662390] [Locus Tag: TcasGA2_TC011801] [Chromosome: LG9] [Map Location: ] [Description: peroxisomal membrane protein 2] [Gene Type: protein-coding]","LOC662390; TcasGA2_TC011801"]
[1434,"NC_007424.3",13389123,"SNV","G","C","Homozygous",21,21,100,1,15,13,0.46,37.67,28,28,11,15,null,1,1,"no","C/C","No",1,83.89,"XP_015839198.1:c.2800C>G","XP_015839198.1:p.Arg934Gly","LOC100142393",100142393,null,"100142393 [Gene Symbol: LOC100142393] [Locus Tag: TcasGA2_TC011800] [Chromosome: LG9] [Map Location: ] [Description: cystic fibrosis transmembrane conductance regulator] [Gene Type: protein-coding]","LOC100142393; TcasGA2_TC011800"]
[1435,"NC_007424.3",13405879,"SNV","A","T","Homozygous",21,21,100,1,8,15,0.35,38.48,23,23,9,12,null,1,1,"no","T/T","No",1,85.53,"XP_973747.1:c.124T>A","XP_973747.1:p.Ser42Thr","LOC662564",662564,null,"662564 [Gene Symbol: LOC662564] [Locus Tag: TcasGA2_TC011798] [Chromosome: LG9] [Map Location: ] [Description: altered disjunction] [Gene Type: protein-coding]","TcasGA2_TC011798; ald; LOC662564"]
[1436,"NC_007424.3",13406613,"SNV","G","T","Homozygous",25,25,100,1,14,12,0.46,38.16,26,26,8,14,null,1,1,"no","T/T","No",1,97.56,"XP_008198271.1:c.[201G>T]; XP_008198270.1:c.[246G>T]","XP_008198271.1:p.[Arg67Ser]; XP_008198270.1:p.[Arg82Ser]","LOC103314323",103314323,null,"103314323 [Gene Symbol: LOC103314323] [Locus Tag: TcasGA2_TC034436] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314323] [Gene Type: protein-coding]","LOC103314323; TcasGA2_TC034436"]
[1437,"NC_007424.3",13429868,"SNV","C","A","Homozygous",24,24,100,1,15,14,0.48,37.58,29,29,10,14,null,1,1,"no","A/A","No",1,94.53,"XP_008198161.2:c.[4316C>A]; XP_015839327.1:c.[4271C>A]","XP_008198161.2:p.[Pro1439His]; XP_015839327.1:p.[Pro1424His]","LOC103314300",103314300,null,"103314300 [Gene Symbol: LOC103314300] [Locus Tag: TcasGA2_TC034437] [Chromosome: LG9] [Map Location: ] [Description: polycystic kidney disease protein 1-like 2] [Gene Type: protein-coding]","TcasGA2_TC034437; LOC103314300"]
[1438,"NC_007424.3",13471699,"SNV","G","A","Homozygous",28,28,100,1,23,13,0.36,36.89,36,36,12,17,null,1,1,"no","A/A","No",1,106.56,"XP_967143.1:c.[188C>T]; XP_008198279.1:c.[34-311C>T]","XP_967143.1:p.Pro63Leu","LOC663060, LOC661404","663060 , 661404",null,"663060 [Gene Symbol: LOC663060] [Locus Tag: TcasGA2_TC012706] [Chromosome: LG9] [Map Location: ] [Description: origin recognition complex subunit 5] [Gene Type: protein-coding] || 661404 [Gene Symbol: LOC661404] [Locus Tag: TcasGA2_TC011791] [Chromosome: LG9] [Map Location: ] [Description: annexin B9] [Gene Type: protein-coding]","TcasGA2_TC012706; LOC663060 || LOC661404; TcasGA2_TC011791"]
[1439,"NC_007424.3",13525613,"SNV","A","G","Homozygous",20,20,100,1,4,17,0.19,36.2,21,21,10,13,null,1,1,"no","G/G","No",1,80.88,"XP_008198289.1:c.370A>G","XP_008198289.1:p.Thr124Ala","LOC661617",661617,null,"661617 [Gene Symbol: LOC661617] [Locus Tag: TcasGA2_TC012708] [Chromosome: LG9] [Map Location: ] [Description: 60S ribosomal protein L23a] [Gene Type: protein-coding]","TcasGA2_TC012708; LOC661617"]
[1440,"NC_007424.3",13552040,"SNV","A","G","Homozygous",21,21,100,1,21,0,0,37.24,21,21,4,12,null,1,1,"no","G/G","No",1,80.87,"XP_015838960.1:c.3724A>G","XP_015838960.1:p.Thr1242Ala","LOC663281",663281,null,"663281 [Gene Symbol: LOC663281] [Locus Tag: TcasGA2_TC012710] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC663281] [Gene Type: protein-coding]","LOC663281; TcasGA2_TC012710"]
[1441,"NC_007424.3",13616771,"SNV","T","G","Homozygous",24,24,100,1,15,11,0.42,37.58,26,26,9,16,null,1,1,"no","G/G","No",1,92.92,"XP_015839119.1:c.[2371T>G]; XP_008198294.1:c.[2224T>G]; XP_974469.1:c.[2224T>G]; XP_015839120.1:c.[2224T>G]","XP_015839119.1:p.[Leu791Val]; XP_008198294.1:p.[Leu742Val]; XP_974469.1:p.[Leu742Val]; XP_015839120.1:p.[Leu742Val]","LOC663321",663321,null,"663321 [Gene Symbol: LOC663321] [Locus Tag: TcasGA2_TC012717] [Chromosome: LG9] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC663321; TcasGA2_TC012717"]
[1442,"NC_007424.3",13700753,"SNV","G","A","Heterozygous",12,30,40,1,12,2,0.14,38.92,14,39,2,10,1.8,0.41,0.81,"no","A/G","No",1,52.49,"XP_015839121.1:c.[1208G>A]; XP_008198297.1:c.[1208G>A]; XP_015839122.1:c.[1208G>A]; XP_008198296.1:c.[1343G>A]; XP_008198298.1:c.[1208G>A]","XP_015839121.1:p.[Ser403Asn]; XP_008198297.1:p.[Ser403Asn]; XP_015839122.1:p.[Ser403Asn]; XP_008198296.1:p.[Ser448Asn]; XP_008198298.1:p.[Ser403Asn]","LOC663375",663375,null,"663375 [Gene Symbol: LOC663375] [Locus Tag: TcasGA2_TC012723] [Chromosome: LG9] [Map Location: ] [Description: TOX high mobility group box family member 4] [Gene Type: protein-coding]","LOC663375; TcasGA2_TC012723"]
[1443,"NC_007424.3","13707876..13707877","MNV","TC","GG","Homozygous",21,21,100,1,14,14,0.5,38.65,28,28,12,15,null,1,1,"no","GG/GG","No",1,200,"XP_974552.1:c.16_17delTCinsGG","XP_974552.1:p.Ser6Gly","LOC663412",663412,null,"663412 [Gene Symbol: LOC663412] [Locus Tag: TcasGA2_TC012724] [Chromosome: LG9] [Map Location: ] [Description: probable rRNA-processing protein EBP2 homolog] [Gene Type: protein-coding]","LOC663412; TcasGA2_TC012724"]
[1445,"NC_007424.3",13892564,"SNV","C","A","Heterozygous",18,27,66.67,1,8,14,0.36,36.83,22,31,9,10,-0.05,0.81,1,"no","A/C","No",1,55.89,"XP_008198138.1:c.[7991C>A]; NP_001036067.1:c.[7955C>A]","XP_008198138.1:p.[Ala2664Glu]; NP_001036067.1:p.[Ala2652Glu]","Cht10",652967,"chitinase 10","652967 [Gene Symbol: Cht10] [Locus Tag: TcasGA2_TC012734] [Chromosome: LG9] [Map Location: ] [Description: chitinase 10] [Gene Type: protein-coding]","Cht10; TcCht10; TcasGA2_TC012734"]
[1447,"NC_007424.3",13907793,"SNV","C","G","Homozygous",23,23,100,1,7,18,0.28,37.83,25,25,11,11,null,1,1,"no","G/G","No",1,89.91,"XP_008198164.1:c.1077C>G","XP_008198164.1:p.His359Gln","LOC663782",663782,null,"663782 [Gene Symbol: LOC663782] [Locus Tag: TcasGA2_TC012737] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized protein C2orf42 homolog] [Gene Type: protein-coding]","LOC663782; TcasGA2_TC012737"]
[1450,"NC_007424.3",14218359,"SNV","A","G","Homozygous",20,20,100,1,0,20,0,37.8,20,20,3,6,null,1,1,"no","G/G","No",1,80.88,"XP_015839094.1:c.[3478T>C]; XP_008198324.2:c.[3475T>C]; XP_015839095.1:c.[3145T>C]","XP_015839094.1:p.[Tyr1160His]; XP_008198324.2:p.[Tyr1159His]; XP_015839095.1:p.[Tyr1049His]","LOC103314330, LOC664031","103314330 , 664031",null,"103314330 [Gene Symbol: LOC103314330] [Locus Tag: TcasGA2_TC012752] [Chromosome: LG9] [Map Location: ] [Description: coiled-coil domain-containing protein 39] [Gene Type: protein-coding] || 664031 [Gene Symbol: LOC664031] [Locus Tag: TcasGA2_TC011738] [Chromosome: LG9] [Map Location: LG9|LG9] [Description: cyclin-dependent kinase 12] [Gene Type: protein-coding]","LOC103314330; TcasGA2_TC012752 || LOC664031; TcasGA2_TC011738"]
[1451,"NC_007424.3",14221556,"SNV","G","C","Homozygous",42,42,100,1,5,37,0.12,37.43,42,42,16,24,null,1,1,"no","C/C","No",1,146.99,"XP_015839096.1:c.[1448C>G]; XP_015839094.1:c.[1448C>G]; XP_008198324.2:c.[1445C>G]; XP_015839095.1:c.[1115C>G]","XP_015839096.1:p.[Ala483Gly]; XP_015839094.1:p.[Ala483Gly]; XP_008198324.2:p.[Ala482Gly]; XP_015839095.1:p.[Ala372Gly]","LOC103314330, LOC664031","103314330 , 664031",null,"103314330 [Gene Symbol: LOC103314330] [Locus Tag: TcasGA2_TC012752] [Chromosome: LG9] [Map Location: ] [Description: coiled-coil domain-containing protein 39] [Gene Type: protein-coding] || 664031 [Gene Symbol: LOC664031] [Locus Tag: TcasGA2_TC011738] [Chromosome: LG9] [Map Location: LG9|LG9] [Description: cyclin-dependent kinase 12] [Gene Type: protein-coding]","LOC103314330; TcasGA2_TC012752 || LOC664031; TcasGA2_TC011738"]
[1454,"NC_007424.3",14291361,"SNV","T","C","Homozygous",29,29,100,1,7,23,0.23,36.07,30,30,9,12,null,1,1,"no","C/C","No",1,107.96,"XP_008198329.1:c.[680T>C]; XP_015839209.1:c.[689T>C]; XP_015839211.1:c.[689T>C]; XP_015839212.1:c.[650T>C]","XP_008198329.1:p.[Val227Ala]; XP_015839209.1:p.[Val230Ala]; XP_015839211.1:p.[Val230Ala]; XP_015839212.1:p.[Val217Ala]","LOC664114",664114,null,"664114 [Gene Symbol: LOC664114] [Locus Tag: TcasGA2_TC012755] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC664114] [Gene Type: protein-coding]","TcasGA2_TC012755; LOC664114"]
[1455,"NC_007424.3","14298474..14298475","MNV","CT","GC","Homozygous",20,20,100,1,15,9,0.38,37.79,24,24,10,18,null,1,1,"no","GC/GC","No",1,200,"XP_975231.1:c.[545_546delCTinsGC]; XP_008198330.1:c.[557_558delCTinsGC]; XP_008198331.1:c.[512_513delCTinsGC]; XP_008198332.1:c.[512_513delCTinsGC]","XP_975231.1:p.[Thr182Ser]; XP_008198330.1:p.[Thr186Ser]; XP_008198331.1:p.[Thr171Ser]; XP_008198332.1:p.[Thr171Ser]","LOC664123",664123,null,"664123 [Gene Symbol: LOC664123] [Locus Tag: TcasGA2_TC012756] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort] [Gene Type: protein-coding]","TcasGA2_TC012756; LOC664123"]
[1456,"NC_007424.3","14301162..14301164","MNV","GGC","AAT","Homozygous",24,24,100,1,9,16,0.36,37.39,25,25,8,17,null,1,1,"no","AAT/AAT","No",1,200,"XP_008198166.1:c.715_717delGGCinsAAT","XP_008198166.1:p.Gly239Asn","LOC664131",664131,null,"664131 [Gene Symbol: LOC664131] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: protein croquemort-like] [Gene Type: protein-coding]","LOC664131"]
[1457,"NC_007424.3","14493545^14493546","Insertion","-","CAACAA","Homozygous",19,22,86.36,1,14,7,0.33,38.35,21,25,10,14,null,1,1,"no","CAACAA/CAACAA","No",1,200,"NP_001161900.1:c.1134_1135insCAACAA","NP_001161900.1:p.Gln383_Ser384insGlnGln","Cpap1-i",655154,"cuticular protein analogous to peritrophins 1-I","655154 [Gene Symbol: Cpap1-i] [Locus Tag: TcasGA2_TC012766] [Chromosome: LG9] [Map Location: ] [Description: cuticular protein analogous to peritrophins 1-I] [Gene Type: protein-coding]","Cpap1-i; TcasGA2_TC012766; CG13643"]
[1458,"NC_007424.3",14525398,"SNV","T","A","Homozygous",28,28,100,1,19,22,0.46,35.43,41,41,8,14,null,1,1,"no","A/A","No",1,106.57,"XP_967196.1:c.376A>T","XP_967196.1:p.Ile126Phe","LOC655550",655550,null,"655550 [Gene Symbol: LOC655550] [Locus Tag: TcasGA2_TC011721] [Chromosome: LG9] [Map Location: ] [Description: retinol dehydrogenase 11] [Gene Type: protein-coding]","TcasGA2_TC011721; LOC655550"]
[1459,"NC_007424.3",14559245,"SNV","A","C","Homozygous",24,24,100,1,23,5,0.18,37.25,28,28,11,15,null,1,1,"no","C/C","No",1,92.92,"XP_967927.1:c.1974A>C","XP_967927.1:p.Leu658Phe","LOC656294",656294,null,"656294 [Gene Symbol: LOC656294] [Locus Tag: TcasGA2_TC012775] [Chromosome: LG9] [Map Location: ] [Description: DC-STAMP domain-containing protein 1] [Gene Type: protein-coding]","LOC656294; TcasGA2_TC012775"]
[1462,"NC_007424.3",15015872,"SNV","A","G","Homozygous",20,20,100,1,2,18,0.1,37,20,20,6,9,null,1,1,"no","G/G","No",1,80.88,"XP_008198356.1:c.489A>G","XP_008198356.1:p.Ile163Met","LOC659038",659038,null,"659038 [Gene Symbol: LOC659038] [Locus Tag: TcasGA2_TC034461] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC659038] [Gene Type: protein-coding]","LOC659038; TcasGA2_TC034461"]
[1463,"NC_007424.3",15017074,"SNV","A","G","Homozygous",20,20,100,1,0,20,0,38.9,20,20,7,7,null,1,1,"no","G/G","No",1,80.88,"XP_008198356.1:c.1691A>G","XP_008198356.1:p.Lys564Arg","LOC659038",659038,null,"659038 [Gene Symbol: LOC659038] [Locus Tag: TcasGA2_TC034461] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC659038] [Gene Type: protein-coding]","LOC659038; TcasGA2_TC034461"]
[1464,"NC_007424.3",15109789,"SNV","C","T","Homozygous",24,24,100,1,10,14,0.42,38.83,24,24,7,10,null,1,1,"no","T/T","No",1,94.55,"XP_971655.2:c.1820C>T","XP_971655.2:p.Thr607Ile","LOC660319",660319,null,"660319 [Gene Symbol: LOC660319] [Locus Tag: TcasGA2_TC012802] [Chromosome: LG9] [Map Location: ] [Description: S1 RNA-binding domain-containing protein 1] [Gene Type: protein-coding]","LOC660319; TcasGA2_TC012802"]
[1465,"NC_007424.3",15122277,"SNV","C","T","Homozygous",26,26,100,1,18,14,0.44,36.73,32,32,14,13,null,1,1,"no","T/T","No",1,97.57,"XP_015839116.1:c.[26G>A]; XP_971879.2:c.[26G>A]; XP_971934.2:c.[26G>A]","XP_015839116.1:p.[Ser9Asn]; XP_971879.2:p.[Ser9Asn]; XP_971934.2:p.[Ser9Asn]","LOC660564",660564,null,"660564 [Gene Symbol: LOC660564] [Locus Tag: TcasGA2_TC011681] [Chromosome: LG9] [Map Location: ] [Description: probable cytosolic iron-sulfur protein assembly protein Ciao1] [Gene Type: protein-coding]","TcasGA2_TC011681; LOC660564"]
[1467,"NC_007424.3",15128737,"SNV","G","A","Homozygous",23,23,100,1,20,15,0.43,37.65,35,35,10,17,null,1,1,"no","A/A","No",1,91.52,"XP_972145.2:c.[652-3C>T]; XP_008198418.1:c.[692C>T]","XP_008198418.1:p.Ser231Leu","LOC103314342, LOC660849","103314342 , 660849",null,"103314342 [Gene Symbol: LOC103314342] [Locus Tag: TcasGA2_TC012805] [Chromosome: LG9] [Map Location: LG9|LG9] [Description: putative leucine-rich repeat-containing protein DDB_G0290503] [Gene Type: protein-coding] || 660849 [Gene Symbol: LOC660849] [Locus Tag: TcasGA2_TC011678] [Chromosome: LG9] [Map Location: ] [Description: 23 kDa integral membrane protein] [Gene Type: protein-coding]","LOC103314342; TcasGA2_TC012805 || TcasGA2_TC011678; LOC660849"]
[1468,"NC_007424.3",15149968,"SNV","C","A","Homozygous",23,23,100,1,5,18,0.22,38.13,23,23,7,9,null,1,1,"no","A/A","No",1,91.52,"XP_008198423.1:c.291C>A","XP_008198423.1:p.Phe97Leu","LOC103314356",103314356,null,"103314356 [Gene Symbol: LOC103314356] [Locus Tag: TcasGA2_TC034464] [Chromosome: LG9] [Map Location: ] [Description: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like] [Gene Type: protein-coding]","LOC103314356; TcasGA2_TC034464"]
[1469,"NC_007424.3",15149972,"SNV","C","T","Homozygous",22,22,100,1,5,17,0.23,37.45,22,22,7,9,null,1,1,"no","T/T","No",1,88.54,"XP_008198423.1:c.295C>T","XP_008198423.1:p.Leu99Phe","LOC103314356",103314356,null,"103314356 [Gene Symbol: LOC103314356] [Locus Tag: TcasGA2_TC034464] [Chromosome: LG9] [Map Location: ] [Description: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like] [Gene Type: protein-coding]","LOC103314356; TcasGA2_TC034464"]
[1470,"NC_007424.3",15258953,"SNV","A","G","Homozygous",21,21,100,1,15,10,0.4,37,25,25,10,14,null,1,1,"no","G/G","No",1,83.89,"XP_015839226.1:c.[131T>C]; XP_008198527.1:c.[131T>C]","XP_015839226.1:p.[Val44Ala]; XP_008198527.1:p.[Val44Ala]","LOC103314375",103314375,null,"103314375 [Gene Symbol: LOC103314375] [Locus Tag: TcasGA2_TC012880] [Chromosome: LG9] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314375; TcasGA2_TC012880"]
[1471,"NC_007424.3",15471403,"SNV","A","G","Homozygous",22,22,100,1,10,20,0.33,38.59,30,30,7,11,null,1,1,"no","G/G","No",1,86.9,"XP_015839247.1:c.1328A>G","XP_015839247.1:p.Glu443Gly","LOC103314382",103314382,null,"103314382 [Gene Symbol: LOC103314382] [Locus Tag: TcasGA2_TC011615] [Chromosome: LG9] [Map Location: ] [Description: nuclear cap-binding protein subunit 3] [Gene Type: protein-coding]","TcasGA2_TC011615; LOC103314382"]
[1472,"NC_007424.3",15505219,"SNV","G","A","Homozygous",20,20,100,1,15,5,0.25,37.95,20,20,6,13,null,1,1,"no","A/A","No",1,82.49,"XP_015839248.1:c.110C>T","XP_015839248.1:p.Ser37Leu","LOC100142542",100142542,null,"100142542 [Gene Symbol: LOC100142542] [Locus Tag: TcasGA2_TC012862] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100142542] [Gene Type: protein-coding]","LOC100142542; TcasGA2_TC012862"]
[1473,"NC_007424.3",15595048,"SNV","T","C","Homozygous",32,32,100,1,16,21,0.43,38.22,37,37,12,21,null,1,1,"no","C/C","No",1,116.99,"XP_015839237.1:c.[998T>C]; XP_015839238.1:c.[986T>C]; XP_008198497.1:c.[998T>C]","XP_015839237.1:p.[Val333Ala]; XP_015839238.1:p.[Val329Ala]; XP_008198497.1:p.[Val333Ala]","LOC103314369",103314369,null,"103314369 [Gene Symbol: LOC103314369] [Locus Tag: TcasGA2_TC011621] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC103314369] [Gene Type: protein-coding]","TcasGA2_TC011621; LOC103314369"]
[1474,"NC_007424.3",15652504,"SNV","A","G","Homozygous",23,23,100,1,7,19,0.27,36.87,26,26,9,20,null,1,1,"no","G/G","No",1,89.91,"XP_015838961.1:c.1675T>C","XP_015838961.1:p.Ser559Pro","LOC660320",660320,null,"660320 [Gene Symbol: LOC660320] [Locus Tag: TcasGA2_TC012846] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC660320] [Gene Type: protein-coding]","TcasGA2_TC012846; LOC660320"]
[1475,"NC_007424.3",15745770,"SNV","G","A","Homozygous",20,20,100,1,11,10,0.48,38.2,21,21,9,13,null,1,1,"no","A/A","No",1,82.49,"NP_001155992.1:c.[598G>A]; XP_015838938.1:c.[11-15738C>T]","NP_001155992.1:p.Val200Ile","LOC659813, LOC100142219","659813 , 100142219","somatostatin receptor type 2, uncharacterized LOC100142219","659813 [Gene Symbol: LOC659813] [Locus Tag: TcasGA2_TC012842] [Chromosome: LG9] [Map Location: ] [Description: somatostatin receptor type 2] [Gene Type: protein-coding] || 100142219 [Gene Symbol: LOC100142219] [Locus Tag: ] [Chromosome: LG9] [Map Location: ] [Description: uncharacterized LOC100142219] [Gene Type: protein-coding]","LOC659813; TcasGA2_TC012842 || LOC100142219"]
[1477,"NC_007425.3",712929,"SNV","C","T","Heterozygous",12,25,48,1,12,4,0.25,38.17,16,33,5,7,0.19,0.31,1,"no","C/T","No",1,96.16,"XP_972566.1:c.[170C>T]; XP_008198564.1:c.[384-4090C>T]","XP_972566.1:p.Ser57Phe","LOC661357, LOC661308","661357 , 661308",null,"661357 [Gene Symbol: LOC661357] [Locus Tag: TcasGA2_TC011253] [Chromosome: LG10] [Map Location: ] [Description: protein unc-13 homolog D] [Gene Type: protein-coding] || 661308 [Gene Symbol: LOC661308] [Locus Tag: TcasGA2_TC011254] [Chromosome: LG10] [Map Location: ] [Description: glutarate-semialdehyde dehydrogenase DavD] [Gene Type: protein-coding]","TcasGA2_TC011253; LOC661357 || TcasGA2_TC011254; LOC661308"]
[1478,"NC_007425.3",1499598,"SNV","C","A","Homozygous",30,30,100,1,25,10,0.29,38.33,35,35,12,14,null,1,1,"no","A/A","No",1,112.57,"XP_015839391.1:c.[85-8665G>T]; XP_015839395.1:c.[463-8665G>T]; XP_015839390.1:c.[697-8665G>T]; XP_015839389.1:c.[697-8665G>T]; XP_008199621.1:c.[1673C>A]; XP_015839393.1:c.[85-8665G>T]; XP_015839394.1:c.[46-8665G>T]; XP_015839392.1:c.[85-8665G>T]","XP_008199621.1:p.Pro558His","LOC655559, LOC100141690","655559 , 100141690",null,"655559 [Gene Symbol: LOC655559] [Locus Tag: TcasGA2_TC016080] [Chromosome: LG10] [Map Location: ] [Description: protein sickie] [Gene Type: protein-coding] || 100141690 [Gene Symbol: LOC100141690] [Locus Tag: TcasGA2_TC031341] [Chromosome: LG10] [Map Location: ] [Description: nose resistant to fluoxetine protein 6-like] [Gene Type: protein-coding]","LOC655559; TcasGA2_TC016080 || TcasGA2_TC031341; LOC100141690"]
[1479,"NC_007425.3",1801021,"SNV","A","G","Heterozygous",12,25,48,1,12,0,0,39.67,12,25,4,7,0.73,0.03,0.33,"no","A/G","No",1,97.69,"XP_015839409.1:c.176A>G","XP_015839409.1:p.Glu59Gly","LOC107398740",107398740,null,"107398740 [Gene Symbol: LOC107398740] [Locus Tag: TcasGA2_TC031350] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC107398740] [Gene Type: protein-coding]","LOC107398740; TcasGA2_TC031350"]
[1480,"NC_007425.3",2122352,"SNV","G","A","Homozygous",21,21,100,1,2,21,0.09,38.1,23,23,9,8,null,1,1,"no","A/A","No",1,85.5,"XP_008197948.2:c.346G>A","XP_008197948.2:p.Gly116Ser","LOC656826",656826,null,"656826 [Gene Symbol: LOC656826] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: phospholipase A1-like] [Gene Type: protein-coding]","LOC656826"]
[1481,"NC_007425.3","2122359..2122360","MNV","AC","TT","Homozygous",20,20,100,1,2,20,0.09,39.47,22,22,11,8,null,1,1,"no","TT/TT","No",1,200,"XP_008197948.2:c.353_354delACinsTT","XP_008197948.2:p.Tyr118Phe","LOC656826",656826,null,"656826 [Gene Symbol: LOC656826] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: phospholipase A1-like] [Gene Type: protein-coding]","LOC656826"]
[1482,"NC_007425.3",2272693,"SNV","G","A","Homozygous",20,20,100,1,5,15,0.25,39.8,20,20,7,9,null,1,1,"no","A/A","No",1,82.49,"XP_008197874.1:c.[4016G>A]; XP_008197869.1:c.[4019G>A]","XP_008197874.1:p.[Ser1339Asn]; XP_008197869.1:p.[Ser1340Asn]","LOC657391",657391,null,"657391 [Gene Symbol: LOC657391] [Locus Tag: TcasGA2_TC011290] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase listerin] [Gene Type: protein-coding]","TcasGA2_TC011290; LOC657391"]
[1483,"NC_007425.3",2279587,"SNV","G","C","Homozygous",21,21,100,1,10,11,0.48,37.29,21,21,9,16,null,1,1,"no","C/C","No",1,83.89,"XP_015839415.1:c.205C>G","XP_015839415.1:p.His69Asp","LOC107398746",107398746,null,"107398746 [Gene Symbol: LOC107398746] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: shematrin-like protein 3] [Gene Type: protein-coding]","LOC107398746"]
[1484,"NC_007425.3","2437570..2437571","MNV","CC","GT","Homozygous",21,21,100,1,20,5,0.2,36.57,25,25,13,15,null,1,1,"no","GT/GT","No",1,200,"XP_008198136.1:c.[555_556delCCinsGT]; XP_015839448.1:c.[555_556delCCinsGT]; XP_971431.2:c.[555_556delCCinsGT]; XP_008198135.1:c.[555_556delCCinsGT]","XP_008198136.1:p.[Leu186Phe]; XP_015839448.1:p.[Leu186Phe]; XP_971431.2:p.[Leu186Phe]; XP_008198135.1:p.[Leu186Phe]","LOC660076",660076,null,"660076 [Gene Symbol: LOC660076] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: rho GTPase-activating protein 19] [Gene Type: protein-coding]","LOC660076"]
[1486,"NC_007425.3",3116133,"SNV","A","T","Homozygous",23,23,100,1,15,9,0.38,37.87,24,24,9,12,null,1,1,"no","T/T","No",1,91.55,"XP_015839477.1:c.130A>T","XP_015839477.1:p.Thr44Ser","LOC103314420",103314420,null,"103314420 [Gene Symbol: LOC103314420] [Locus Tag: TcasGA2_TC011306] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314420] [Gene Type: protein-coding]","LOC103314420; or14; TcasGA2_TC011306"]
[1487,"NC_007425.3",3116137,"SNV","C","T","Homozygous",22,22,100,1,14,9,0.39,37.86,23,23,9,12,null,1,1,"no","T/T","No",1,88.54,"XP_015839477.1:c.134C>T","XP_015839477.1:p.Ala45Val","LOC103314420",103314420,null,"103314420 [Gene Symbol: LOC103314420] [Locus Tag: TcasGA2_TC011306] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314420] [Gene Type: protein-coding]","LOC103314420; or14; TcasGA2_TC011306"]
[1489,"NC_007425.3",3180392,"SNV","A","G","Homozygous",25,25,100,1,9,17,0.35,37.76,26,26,9,15,null,1,1,"no","G/G","No",1,95.93,"XP_008198647.1:c.[1261A>G]; XP_008198645.1:c.[1261A>G]","XP_008198647.1:p.[Ser421Gly]; XP_008198645.1:p.[Ser421Gly]","LOC656159",656159,null,"656159 [Gene Symbol: LOC656159] [Locus Tag: TcasGA2_TC011313] [Chromosome: LG10] [Map Location: ] [Description: gamma-glutamyltransferase 7] [Gene Type: protein-coding]","LOC656159; TcasGA2_TC011313"]
[1490,"NC_007425.3",3199478,"SNV","C","T","Homozygous",20,20,100,1,5,15,0.25,37.7,20,20,9,17,null,1,1,"no","T/T","No",1,82.52,"XP_968111.1:c.416G>A","XP_968111.1:p.Gly139Glu","LOC656492",656492,null,"656492 [Gene Symbol: LOC656492] [Locus Tag: TcasGA2_TC011177] [Chromosome: LG10] [Map Location: ] [Description: ELMO domain-containing protein 2] [Gene Type: protein-coding]","TcasGA2_TC011177; LOC656492"]
[1493,"NC_007425.3",3207156,"SNV","T","C","Heterozygous",8,21,38.1,1,5,5,0.5,35.88,10,30,3,5,-0.07,0.73,0.95,"no","C/T","No",1,58.15,"XP_008198648.1:c.483A>G","XP_008198648.1:p.Ile161Met","LOC103314407",103314407,null,"103314407 [Gene Symbol: LOC103314407] [Locus Tag: TcasGA2_TC011176] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314407; TcasGA2_TC011176"]
[1494,"NC_007425.3",3207161,"SNV","G","C","Heterozygous",9,22,40.91,1,5,9,0.36,35.33,14,34,7,10,-2.04,0.74,0.68,"no","complex","No",1,200,"XP_008198648.1:c.478C>G","XP_008198648.1:p.Gln160Glu","LOC103314407",103314407,null,"103314407 [Gene Symbol: LOC103314407] [Locus Tag: TcasGA2_TC011176] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314407; TcasGA2_TC011176"]
[1495,"NC_007425.3",3207170,"SNV","C","T","Heterozygous",13,22,59.09,1,12,7,0.37,37,19,32,6,7,0.4,0.43,0.85,"no","C/T","No",1,68.03,"XP_008198648.1:c.469G>A","XP_008198648.1:p.Val157Ile","LOC103314407",103314407,null,"103314407 [Gene Symbol: LOC103314407] [Locus Tag: TcasGA2_TC011176] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314407; TcasGA2_TC011176"]
[1496,"NC_007425.3",3469013,"SNV","T","C","Homozygous",20,20,100,1,16,4,0.2,38.05,20,20,9,12,null,1,1,"no","C/C","No",1,80.88,"XP_969824.1:c.73T>C","XP_969824.1:p.Ser25Pro","LOC658333",658333,null,"658333 [Gene Symbol: LOC658333] [Locus Tag: TcasGA2_TC011324] [Chromosome: LG10] [Map Location: ] [Description: WAP four-disulfide core domain-like protein] [Gene Type: protein-coding]","TcasGA2_TC011324; LOC658333; WAP"]
[1497,"NC_007425.3",4007111,"SNV","G","C","Heterozygous",10,21,47.62,1,6,10,0.38,36.4,16,27,4,7,-2.78,0.04,0.57,"no","C/G","No",1,82.47,"XP_015839539.1:c.[316G>C]; XP_015839538.1:c.[316G>C]; XP_015839537.1:c.[316G>C]","XP_015839539.1:p.[Asp106His]; XP_015839538.1:p.[Asp106His]; XP_015839537.1:p.[Asp106His]","LOC107398764",107398764,null,"107398764 [Gene Symbol: LOC107398764] [Locus Tag: TcasGA2_TC011345] [Chromosome: LG10] [Map Location: ] [Description: odorant receptor 22c-like] [Gene Type: protein-coding]","LOC107398764; TcasGA2_TC011345"]
[1503,"NC_007425.3",4518281,"SNV","T","C","Homozygous",22,22,100,1,16,10,0.38,37.5,26,26,11,14,null,1,1,"no","C/C","No",1,86.9,"XP_015839555.1:c.[1587+1087T>C]; XP_015839557.1:c.[2161A>G]; XP_015839556.1:c.[2161A>G]","XP_015839557.1:p.[Met721Val]; XP_015839556.1:p.[Met721Val]","LOC656972, LOC107398773","656972 , 107398773",null,"656972 [Gene Symbol: LOC656972] [Locus Tag: TcasGA2_TC016227] [Chromosome: LG10] [Map Location: ] [Description: E3 ubiquitin-protein ligase HERC2] [Gene Type: protein-coding] || 107398773 [Gene Symbol: LOC107398773] [Locus Tag: TcasGA2_TC016199] [Chromosome: LG10] [Map Location: ] [Description: G-protein coupled receptor 126-like] [Gene Type: protein-coding]","LOC656972; TcasGA2_TC016227; HERC2 || LOC107398773; TcasGA2_TC016199"]
[1506,"NC_007425.3",5090169,"SNV","G","C","Homozygous",21,21,100,1,10,11,0.48,36.48,21,21,8,13,null,1,1,"no","C/C","No",1,83.89,"XP_008198829.1:c.1729G>C","XP_008198829.1:p.Glu577Gln","LOC658561",658561,null,"658561 [Gene Symbol: LOC658561] [Locus Tag: TcasGA2_TC011051] [Chromosome: LG10] [Map Location: ] [Description: histone-lysine N-methyltransferase PRDM9] [Gene Type: protein-coding]","LOC658561; TcasGA2_TC011051"]
[1507,"NC_007425.3","5477972..5477973","MNV","AA","GG","Homozygous",21,21,100,1,6,17,0.26,36.95,23,23,10,6,null,1,1,"no","GG/GG","No",1,200,"XP_015839591.1:c.[1119_1120delAAinsGG]; XP_968654.1:c.[1122_1123delAAinsGG]","XP_015839591.1:p.[Thr374Ala]; XP_968654.1:p.[Thr375Ala]","LOC657081",657081,null,"657081 [Gene Symbol: LOC657081] [Locus Tag: TcasGA2_TC011062] [Chromosome: LG10] [Map Location: ] [Description: innexin inx7] [Gene Type: protein-coding]","TcasGA2_TC011062; LOC657081"]
[1510,"NC_007425.3",5892542,"SNV","G","C","Homozygous",24,24,100,1,13,20,0.39,36.96,33,33,10,15,null,1,1,"no","C/C","No",1,89.91,"NP_001164243.1:c.759C>G","NP_001164243.1:p.Asp253Glu","Ance-3",658170,"angiotensin-converting enzyme 3","658170 [Gene Symbol: Ance-3] [Locus Tag: TcasGA2_TC031642] [Chromosome: LG10] [Map Location: ] [Description: angiotensin-converting enzyme 3] [Gene Type: protein-coding]","TcasGA2_TC031642; Ance-3; GLEAN_02092"]
[1511,"NC_007425.3",5915610,"SNV","G","A","Homozygous",20,20,100,1,8,14,0.36,38.95,22,22,9,9,null,1,1,"no","A/A","No",1,82.49,"XP_969445.1:c.[127C>T]; XP_015839613.1:c.[127C>T]","XP_969445.1:p.[Pro43Ser]; XP_015839613.1:p.[Pro43Ser]","LOC658002",658002,null,"658002 [Gene Symbol: LOC658002] [Locus Tag: TcasGA2_TC031641] [Chromosome: LG10] [Map Location: ] [Description: 15-hydroxyprostaglandin dehydrogenase [NAD(+)]-like] [Gene Type: protein-coding]","TcasGA2_TC031641; LOC658002"]
[1514,"NC_007425.3",5920639,"SNV","T","C","Homozygous",23,23,100,1,4,23,0.15,37.57,27,27,9,11,null,1,1,"no","C/C","No",1,89.9,"XP_008199894.2:c.1498T>C","XP_008199894.2:p.Tyr500His","LOC657844",657844,null,"657844 [Gene Symbol: LOC657844] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: tenascin] [Gene Type: protein-coding]","LOC657844; NimCl1"]
[1515,"NC_007425.3",5920667,"SNV","G","T","Homozygous",22,22,100,1,7,17,0.29,38.23,24,24,8,11,null,1,1,"no","T/T","No",1,88.54,"XP_008199894.2:c.1526G>T","XP_008199894.2:p.Gly509Val","LOC657844",657844,null,"657844 [Gene Symbol: LOC657844] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: tenascin] [Gene Type: protein-coding]","LOC657844; NimCl1"]
[1516,"NC_007425.3",5932722,"SNV","T","C","Homozygous",32,32,100,1,21,21,0.5,35.78,42,42,13,22,null,1,1,"no","C/C","No",1,116.98,"XP_969227.1:c.214A>G","XP_969227.1:p.Thr72Ala","LOC657687",657687,null,"657687 [Gene Symbol: LOC657687] [Locus Tag: TcasGA2_TC031638] [Chromosome: LG10] [Map Location: ] [Description: transmembrane protein 161B] [Gene Type: protein-coding]","LOC657687; TcasGA2_TC031638"]
[1518,"NC_007425.3",6016454,"SNV","T","C","Homozygous",20,20,100,1,15,8,0.35,36.05,23,23,6,15,null,1,1,"no","C/C","No",1,80.88,"XP_008199891.1:c.1316T>C","XP_008199891.1:p.Leu439Ser","LOC656558",656558,null,"656558 [Gene Symbol: LOC656558] [Locus Tag: TcasGA2_TC031632] [Chromosome: LG10] [Map Location: ] [Description: collagen alpha-1(V) chain] [Gene Type: protein-coding]","LOC656558; TcasGA2_TC031632"]
[1519,"NC_007425.3",6027730,"SNV","G","A","Homozygous",20,20,100,1,8,16,0.33,37.3,24,24,8,13,null,1,1,"no","A/A","No",1,82.49,"XP_015839570.1:c.[3823G>A]; XP_015839572.1:c.[3823G>A]; XP_015839573.1:c.[3712G>A]; XP_015839568.1:c.[3823G>A]; XP_015839569.1:c.[3823G>A]; XP_015839571.1:c.[3823G>A]; XP_008199877.1:c.[3793G>A]","XP_015839570.1:p.[Ala1275Thr]; XP_015839572.1:p.[Ala1275Thr]; XP_015839573.1:p.[Ala1238Thr]; XP_015839568.1:p.[Ala1275Thr]; XP_015839569.1:p.[Ala1275Thr]; XP_015839571.1:p.[Ala1275Thr]; XP_008199877.1:p.[Ala1265Thr]","LOC656472",656472,null,"656472 [Gene Symbol: LOC656472] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: protein transport protein Sec16A] [Gene Type: protein-coding]","LOC656472"]
[1520,"NC_007425.3",6081180,"SNV","A","T","Homozygous",20,20,100,1,10,14,0.42,36.7,24,24,12,12,null,1,1,"no","T/T","No",1,79.51,"XP_008199873.1:c.[1604T>A]; XP_008199871.2:c.[1721T>A]; XP_008199872.1:c.[1613T>A]","XP_008199873.1:p.[Ile535Asn]; XP_008199871.2:p.[Ile574Asn]; XP_008199872.1:p.[Ile538Asn]","LOC655977",655977,null,"655977 [Gene Symbol: LOC655977] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: cytosolic purine 5'-nucleotidase] [Gene Type: protein-coding]","LOC655977"]
[1521,"NC_007425.3",6081185,"SNV","G","C","Homozygous",20,20,100,1,10,15,0.4,36.95,25,25,11,12,null,1,1,"no","C/C","No",1,80.88,"XP_008199871.2:c.[1716C>G]; XP_008199873.1:c.[1599C>G]; XP_008199872.1:c.[1608C>G]","XP_008199871.2:p.[Asp572Glu]; XP_008199873.1:p.[Asp533Glu]; XP_008199872.1:p.[Asp536Glu]","LOC655977",655977,null,"655977 [Gene Symbol: LOC655977] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: cytosolic purine 5'-nucleotidase] [Gene Type: protein-coding]","LOC655977"]
[1522,"NC_007425.3",6093445,"SNV","C","T","Homozygous",20,20,100,1,14,9,0.39,38.15,23,23,9,13,null,1,1,"no","T/T","No",1,79.51,"XP_967374.1:c.[87+802C>T]; XP_015839553.1:c.[1256G>A]","XP_015839553.1:p.Arg419Lys","LOC655722, LOC103314776","655722 , 103314776",null,"655722 [Gene Symbol: LOC655722] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: DNA mismatch repair protein Msh2] [Gene Type: protein-coding] || 103314776 [Gene Symbol: LOC103314776] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314776] [Gene Type: protein-coding]","LOC655722 || LOC103314776"]
[1523,"NC_007425.3",6130712,"SNV","A","G","Homozygous",21,21,100,1,7,16,0.3,39.33,23,23,6,15,null,1,1,"no","G/G","No",1,83.89,"XP_967034.2:c.151A>G","XP_967034.2:p.Thr51Ala","LOC655401",655401,null,"655401 [Gene Symbol: LOC655401] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: integrator complex subunit 3 homolog] [Gene Type: protein-coding]","LOC655401"]
[1524,"NC_007425.3",6149474,"SNV","G","T","Homozygous",20,20,100,1,12,12,0.5,38.5,24,24,8,13,null,1,1,"no","T/T","No",1,82.52,"XP_966763.1:c.330G>T","XP_966763.1:p.Glu110Asp","LOC655162",655162,null,"655162 [Gene Symbol: LOC655162] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: KAT8 regulatory NSL complex subunit 1] [Gene Type: protein-coding]","LOC655162"]
[1527,"NC_007425.3",6235222,"SNV","A","G","Heterozygous",12,22,54.55,1,4,11,0.27,38.92,15,29,6,7,1.06,0.18,0.96,"no","A/G","No",1,79.21,"XP_008198893.1:c.[1385T>C]; XP_008198892.1:c.[1391T>C]","XP_008198893.1:p.[Phe462Ser]; XP_008198892.1:p.[Phe464Ser]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1528,"NC_007425.3",6235250,"SNV","A","C","Heterozygous",11,21,52.38,1,5,10,0.33,38.91,15,25,6,6,-1.06,0.16,0.99,"no","A/C","No",1,77.32,"XP_008198892.1:c.[1363T>G]; XP_008198893.1:c.[1357T>G]","XP_008198892.1:p.[Trp455Gly]; XP_008198893.1:p.[Trp453Gly]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1532,"NC_007425.3","6235455..6235456","MNV","CT","TG","Heterozygous",17,26,65.38,1,8,15,0.35,38.88,23,32,15,12,0.11,0.79,0.62,"no","complex","No",1,200,"XP_008198893.1:c.[1151_1152delAGinsCA]; XP_008198892.1:c.[1157_1158delAGinsCA]","XP_008198893.1:p.[Lys384Thr]; XP_008198892.1:p.[Lys386Thr]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1533,"NC_007425.3",6235460,"SNV","C","T","Heterozygous",16,26,61.54,1,8,14,0.36,39.25,22,32,10,9,0.03,0.46,0.56,"no","C/T","No",1,69.73,"XP_008198893.1:c.[1147G>A]; XP_008198892.1:c.[1153G>A]","XP_008198893.1:p.[Val383Ile]; XP_008198892.1:p.[Val385Ile]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1534,"NC_007425.3",6235481,"SNV","C","T","Heterozygous",16,27,59.26,1,6,13,0.32,38.75,19,33,10,9,2.42,0.36,0.7,"no","C/T","No",1,79.76,"XP_008198892.1:c.[1132G>A]; XP_008198893.1:c.[1126G>A]","XP_008198892.1:p.[Glu378Lys]; XP_008198893.1:p.[Glu376Lys]","LOC103314479",103314479,null,"103314479 [Gene Symbol: LOC103314479] [Locus Tag: TcasGA2_TC011035] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC103314479] [Gene Type: protein-coding]","LOC103314479; TcasGA2_TC011035"]
[1535,"NC_007425.3",6385910,"SNV","G","A","Heterozygous",13,23,56.52,1,0,13,0,38.38,13,23,5,4,-1.67,0.19,0.27,"no","A/G","No",1,78.05,"XP_967878.1:c.[1303G>A]; XP_008198901.1:c.[1303G>A]","XP_967878.1:p.[Asp435Asn]; XP_008198901.1:p.[Asp435Asn]","LOC656244",656244,null,"656244 [Gene Symbol: LOC656244] [Locus Tag: TcasGA2_TC011457] [Chromosome: LG10] [Map Location: ] [Description: coiled-coil domain-containing protein 186] [Gene Type: protein-coding]","TcasGA2_TC011457; LOC656244"]
[1536,"NC_007425.3",6417614,"SNV","G","T","Homozygous",20,20,100,1,6,17,0.26,37.45,23,23,7,9,null,1,1,"no","T/T","No",1,82.52,"XP_008198904.2:c.199C>A","XP_008198904.2:p.Gln67Lys","LOC656408",656408,null,"656408 [Gene Symbol: LOC656408] [Locus Tag: TcasGA2_TC011024] [Chromosome: LG10] [Map Location: ] [Description: heat shock protein 75 kDa, mitochondrial] [Gene Type: protein-coding]","LOC656408; TcasGA2_TC011024"]
[1537,"NC_007425.3",6501436,"SNV","C","A","Homozygous",20,20,100,1,0,20,0,39.95,20,20,4,8,null,1,1,"no","A/A","No",1,82.49,"XP_015839624.1:c.[916C>A]; NP_001034527.2:c.[952C>A]","XP_015839624.1:p.[Leu306Met]; NP_001034527.2:p.[Leu318Met]","Kr",641605,"Kruppel","641605 [Gene Symbol: Kr] [Locus Tag: TcasGA2_TC011460] [Chromosome: LG10] [Map Location: ] [Description: Kruppel] [Gene Type: protein-coding]","Kr; TcasGA2_TC011460"]
[1538,"NC_007425.3",6541730,"SNV","G","C","Heterozygous",8,23,34.78,1,0,8,0,39.75,8,24,1,2,1.97,0.31,0.87,"no","C/G","No",1,51.58,"XP_008198905.1:c.894C>G","XP_008198905.1:p.Asp298Glu","LOC656575",656575,null,"656575 [Gene Symbol: LOC656575] [Locus Tag: TcasGA2_TC011023] [Chromosome: LG10] [Map Location: ] [Description: cysteine--tRNA ligase, cytoplasmic] [Gene Type: protein-coding]","LOC656575; TcasGA2_TC011023"]
[1540,"NC_007425.3",6739235,"SNV","G","A","Homozygous",31,31,100,1,28,8,0.22,35.84,36,36,12,22,null,1,1,"no","A/A","No",1,106.56,"XP_968950.1:c.379G>A","XP_968950.1:p.Ala127Thr","LOC657395",657395,null,"657395 [Gene Symbol: LOC657395] [Locus Tag: TcasGA2_TC011467] [Chromosome: LG10] [Map Location: ] [Description: protein prenyltransferase alpha subunit repeat-containing protein 1-B] [Gene Type: protein-coding]","TcasGA2_TC011467; LOC657395"]
[1541,"NC_007425.3",6802122,"SNV","T","A","Homozygous",23,23,100,1,20,3,0.13,39.52,23,23,9,11,null,1,1,"no","A/A","No",1,91.51,"XP_015839669.1:c.405A>T","XP_015839669.1:p.Glu135Asp","LOC103314485",103314485,null,"103314485 [Gene Symbol: LOC103314485] [Locus Tag: TcasGA2_TC011008] [Chromosome: LG10] [Map Location: ] [Description: zinc finger protein 239] [Gene Type: protein-coding]","TcasGA2_TC011008; LOC103314485"]
[1542,"NC_007425.3",6899709,"SNV","T","C","Heterozygous",13,22,59.09,1,13,2,0.13,37.46,15,24,4,7,1.1,0.66,0.8,"no","C/T","No",1,66.46,"NP_001164314.1:c.427A>G","NP_001164314.1:p.Thr143Ala","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1543,"NC_007425.3",6899756,"SNV","C","G","Heterozygous",25,48,52.08,1,17,8,0.32,38,25,53,10,18,-1.75,0.69,0.97,"no","C/G","No",1,200,"NP_001164314.1:c.380G>C","NP_001164314.1:p.Ser127Thr","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1544,"NC_007425.3",6899808,"SNV","G","T","Homozygous",47,47,100,1,33,24,0.42,36.87,57,57,11,24,null,1,1,"no","T/T","No",1,156.54,"NP_001164314.1:c.328C>A","NP_001164314.1:p.Gln110Lys","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1546,"NC_007425.3","6900018..6900019","MNV","GG","AA","Heterozygous",7,22,31.82,1,0,7,0,41,7,22,1,1,1.94,0.34,0.66,"no","complex","No",1,200,"NP_001164314.1:c.117_118delCCinsTT","NP_001164314.1:p.Pro40Ser","LOC659502",659502,"cathepsin L precursor","659502 [Gene Symbol: LOC659502] [Locus Tag: TcasGA2_TC011000] [Chromosome: LG10] [Map Location: ] [Description: cathepsin L precursor] [Gene Type: protein-coding]","GLEAN_11000; TcasGA2_TC011000; LOC659502"]
[1548,"NC_007425.3",6928135,"SNV","G","A","Heterozygous",8,21,38.1,1,0,8,0,39.5,8,27,2,4,2.17,0.29,0.3,"no","A/G","No",1,56.49,"XP_008200104.1:c.2336G>A","XP_008200104.1:p.Arg779Lys","LOC659831",659831,null,"659831 [Gene Symbol: LOC659831] [Locus Tag: ] [Chromosome: LG10] [Map Location: ] [Description: vacuolar protein sorting-associated protein 16 homolog] [Gene Type: protein-coding]","LOC659831"]
[1549,"NW_015450213.1",4127,"SNV","G","A","Homozygous",20,20,100,1,19,2,0.1,37.9,21,21,9,13,null,1,1,"no","A/A","No",1,82.49,"XP_015839716.1:c.424C>T","XP_015839716.1:p.Arg142*","LOC107398813",107398813,null,"107398813 [Gene Symbol: LOC107398813] [Locus Tag: ] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC107398813] [Gene Type: protein-coding]","LOC107398813"]
[1550,"NW_015450217.1",35663,"SNV","C","T","Heterozygous",13,21,61.9,1,8,9,0.47,38.23,17,25,9,7,0.8,0.46,0.88,"no","C/T","No",1,60.92,"XP_015839721.1:c.[2309C>T]; XP_015839720.1:c.[2309C>T]","XP_015839721.1:p.[Ala770Val]; XP_015839720.1:p.[Ala770Val]","LOC103313487",103313487,null,"103313487 [Gene Symbol: LOC103313487] [Locus Tag: ] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103313487] [Gene Type: protein-coding]","LOC103313487"]
[1551,"NW_015450228.1",3372,"SNV","G","A","Homozygous",20,20,100,1,12,12,0.5,37.65,24,24,9,14,null,1,1,"no","A/A","No",1,82.49,"XP_008201306.2:c.1666C>T","XP_008201306.2:p.Leu556Phe","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1552,"NW_015450228.1",3417,"SNV","T","C","Homozygous",22,22,100,1,10,19,0.34,37.45,29,29,10,11,null,1,1,"no","C/C","No",1,86.89,"XP_008201306.2:c.1621A>G","XP_008201306.2:p.Thr541Ala","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1553,"NW_015450228.1","4360..4361","MNV","TC","CT","Homozygous",30,32,93.75,1,27,11,0.29,38.7,38,42,20,22,null,0.99,1,"no","CT/CT","No",1,200,"XP_008201306.2:c.1510_1511delGAinsAG","XP_008201306.2:p.Asp504Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1554,"NW_015450228.1",4399,"SNV","G","T","Homozygous",41,41,100,1,31,19,0.38,38.66,50,50,22,27,null,1,1,"no","T/T","No",1,142.64,"XP_008201306.2:c.1472C>A","XP_008201306.2:p.Thr491Asn","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1555,"NW_015450228.1",4592,"SNV","C","G","Homozygous",58,62,93.55,1,34,25,0.42,36.88,59,63,25,33,null,1,1,"no","G/G","No",1,129.21,"XP_008201306.2:c.1279G>C","XP_008201306.2:p.Glu427Gln","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1556,"NW_015450228.1",4594,"SNV","T","G","Homozygous",55,57,96.49,1,33,23,0.41,37.18,56,58,23,30,null,1,1,"no","G/G","No",1,130.03,"XP_008201306.2:c.1277A>C","XP_008201306.2:p.Lys426Thr","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1557,"NW_015450228.1","4795..4798","Replacement","ACCC","G","Homozygous",63,66,95.45,1,25,44,0.36,36.48,69,72,35,34,null,1,1,"no","G/G","No",1,200,"XP_008201306.2:c.1073_1076delGGGTinsC","XP_008201306.2:p.Arg358_Val359delinsPro","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1558,"NW_015450228.1",4878,"SNV","G","T","Homozygous",43,46,93.48,1,20,29,0.41,38.72,49,52,18,24,null,0.99,1,"no","T/T","No",1,74.12,"XP_008201306.2:c.993C>A","XP_008201306.2:p.Phe331Leu","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1559,"NW_015450228.1","4960..4961","MNV","CA","GG","Homozygous",42,42,100,1,23,25,0.48,39.01,48,48,25,25,null,1,1,"no","GG/GG","No",1,200,"XP_008201306.2:c.910_911delTGinsCC","XP_008201306.2:p.Cys304Pro","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1560,"NW_015450228.1",5176,"SNV","T","C","Homozygous",69,77,89.61,1,36,37,0.49,38.13,73,81,36,35,null,0.99,1,"no","C/C","No",1,99.56,"XP_008201306.2:c.695A>G","XP_008201306.2:p.Asn232Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1561,"NW_015450228.1",5270,"SNV","T","G","Homozygous",41,45,91.11,1,21,25,0.46,38.1,46,50,19,24,null,0.99,1,"no","G/G","No",1,66.25,"XP_008201306.2:c.601A>C","XP_008201306.2:p.Ile201Leu","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1562,"NW_015450228.1",5279,"SNV","A","G","Homozygous",49,49,100,1,20,34,0.37,37.82,54,54,23,26,null,1,1,"no","G/G","No",1,159.55,"XP_008201306.2:c.592T>C","XP_008201306.2:p.Tyr198His","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1563,"NW_015450228.1",5461,"SNV","C","G","Homozygous",47,47,100,1,20,29,0.41,39.15,49,49,25,24,null,1,1,"no","G/G","No",1,200,"XP_008201306.2:c.410G>C","XP_008201306.2:p.Gly137Ala","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1564,"NW_015450228.1",5498,"SNV","T","C","Homozygous",38,38,100,1,25,16,0.39,38.89,41,41,17,21,null,1,1,"no","C/C","No",1,135.03,"XP_008201306.2:c.373A>G","XP_008201306.2:p.Ile125Val","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1565,"NW_015450228.1",5582,"SNV","G","A","Homozygous",36,37,97.3,1,23,18,0.44,36.69,41,43,21,20,null,1,1,"no","A/A","No",1,91.19,"XP_008201306.2:c.289C>T","XP_008201306.2:p.Gln97*","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1566,"NW_015450228.1",5615,"SNV","G","A","Homozygous",45,45,100,1,25,27,0.48,36.91,52,52,22,22,null,1,1,"no","A/A","No",1,153.53,"XP_008201306.2:c.256C>T","XP_008201306.2:p.Pro86Ser","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1567,"NW_015450228.1",5627,"SNV","C","T","Homozygous",45,49,91.84,1,23,26,0.47,37.2,49,55,24,23,null,1,1,"no","T/T","No",1,70.93,"XP_008201306.2:c.244G>A","XP_008201306.2:p.Glu82Lys","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1568,"NW_015450228.1","5708^5709","Insertion","-","G","Homozygous",26,26,100,1,9,20,0.31,38.42,29,29,13,17,null,1,1,"no","G/G","No",1,98.93,"XP_008201306.2:c.162_163insC","XP_008201306.2:p.Arg55fs","LOC103315148",103315148,null,"103315148 [Gene Symbol: LOC103315148] [Locus Tag: TcasGA2_TC034921] [Chromosome: LGY] [Map Location: ] [Description: uncharacterized LOC103315148] [Gene Type: protein-coding]","TcasGA2_TC034921; LOC103315148"]
[1571,"NW_015450233.1",404665,"SNV","G","A","Heterozygous",16,29,55.17,1,0,16,0,35.75,16,29,5,7,-2.19,0.71,0.29,"no","A/G","No",1,99.64,"XP_008198758.1:c.[344C>T]; XP_008198757.1:c.[374C>T]","XP_008198758.1:p.[Ala115Val]; XP_008198757.1:p.[Ala125Val]","LOC100142406",100142406,null,"100142406 [Gene Symbol: LOC100142406] [Locus Tag: TcasGA2_TC011100] [Chromosome: LG10] [Map Location: ] [Description: probable ATP-dependent RNA helicase YTHDC2] [Gene Type: protein-coding]","bgcn; TcasGA2_TC011100; LOC100142406"]
[1572,"NW_015450233.1",416151,"SNV","A","T","Homozygous",20,20,100,1,9,13,0.41,37.9,22,22,10,8,null,1,1,"no","T/T","No",1,82.52,"XP_008198760.1:c.1078T>A","XP_008198760.1:p.Ser360Thr","LOC657242",657242,null,"657242 [Gene Symbol: LOC657242] [Locus Tag: TcasGA2_TC011099] [Chromosome: LG10] [Map Location: ] [Description: mucin-5AC] [Gene Type: protein-coding]","LOC657242; TcasGA2_TC011099"]
[1574,"NW_015450233.1",500238,"SNV","T","C","Heterozygous",8,21,38.1,1,3,5,0.38,39.5,8,28,2,6,2.72,0.09,0.99,"no","C/T","No",1,60.92,"XP_969311.1:c.508T>C","XP_969311.1:p.Ser170Pro","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1576,"NW_015450233.1","500966..500967","MNV","CA","TG","Heterozygous",13,28,46.43,1,9,6,0.4,36.88,15,37,7,9,-1.93,0.94,0.83,"no","complex","No",1,200,"XP_969311.1:c.1236_1237delCAinsTG","XP_969311.1:p.Arg413Gly","LOC657782",657782,null,"657782 [Gene Symbol: LOC657782] [Locus Tag: TcasGA2_TC011380] [Chromosome: LG10] [Map Location: ] [Description: DNA polymerase theta] [Gene Type: protein-coding]","LOC657782; TcasGA2_TC011380"]
[1578,"NW_015450233.1",526591,"SNV","A","G","Heterozygous",12,22,54.55,1,8,9,0.47,35.5,17,27,4,7,-0.82,0.31,1,"no","A/G","No",1,79.14,"XP_008198771.1:c.356T>C","XP_008198771.1:p.Val119Ala","LOC103314450",103314450,null,"103314450 [Gene Symbol: LOC103314450] [Locus Tag: TcasGA2_TC011094] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314450; TcasGA2_TC011094"]
[1579,"NW_015450233.1",526622,"SNV","C","T","Heterozygous",11,21,52.38,1,4,11,0.27,36.82,15,28,3,6,0.39,0.1,0.94,"no","C/T","No",1,83.32,"XP_008198771.1:c.325G>A","XP_008198771.1:p.Asp109Asn","LOC103314450",103314450,null,"103314450 [Gene Symbol: LOC103314450] [Locus Tag: TcasGA2_TC011094] [Chromosome: LG10] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314450; TcasGA2_TC011094"]
[1581,"NW_015450233.1",559022,"SNV","A","T","Homozygous",20,20,100,1,14,12,0.46,38.3,26,26,9,13,null,1,1,"no","T/T","No",1,82.52,"XP_008198733.1:c.[142T>A]; XP_008198772.1:c.[40+7419T>A]","XP_008198733.1:p.*48Lys","LOC658334, LOC658708","658334 , 658708",null,"658334 [Gene Symbol: LOC658334] [Locus Tag: TcasGA2_TC011092] [Chromosome: LG10] [Map Location: ] [Description: xaa-Pro aminopeptidase 1] [Gene Type: protein-coding] || 658708 [Gene Symbol: LOC658708] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: catalase-like] [Gene Type: protein-coding]","TcasGA2_TC011092; LOC658334 || LOC658708"]
[1582,"NW_015450233.1",592516,"SNV","C","A","Homozygous",28,28,100,1,15,23,0.39,36.46,38,38,8,14,null,1,1,"no","A/A","No",1,106.56,"XP_970294.2:c.[2927G>T]; XP_008198775.1:c.[2816G>T]; XP_008198774.1:c.[2837G>T]","XP_970294.2:p.[Ser976Ile]; XP_008198775.1:p.[Ser939Ile]; XP_008198774.1:p.[Ser946Ile]","LOC658848",658848,null,"658848 [Gene Symbol: LOC658848] [Locus Tag: TcasGA2_TC011087] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC658848] [Gene Type: protein-coding]","LOC658848; TcasGA2_TC011087"]
[1583,"NW_015450233.1",600177,"SNV","T","C","Homozygous",22,22,100,1,20,9,0.31,38.32,29,29,9,15,null,1,1,"no","C/C","No",1,86.9,"XP_970294.2:c.[142-1438A>G]; XP_008198774.1:c.[23A>G]","XP_008198774.1:p.Lys8Arg","LOC658848",658848,null,"658848 [Gene Symbol: LOC658848] [Locus Tag: TcasGA2_TC011087] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC658848] [Gene Type: protein-coding]","LOC658848; TcasGA2_TC011087"]
[1584,"NW_015450233.1",614589,"SNV","T","C","Heterozygous",10,20,50,1,7,6,0.46,38.4,13,24,4,9,0.49,0.87,0.91,"no","C/T","No",1,82.49,"XP_970426.1:c.[623T>C]; XP_015839840.1:c.[623T>C]","XP_970426.1:p.[Val208Ala]; XP_015839840.1:p.[Val208Ala]","LOC658992",658992,null,"658992 [Gene Symbol: LOC658992] [Locus Tag: TcasGA2_TC011388] [Chromosome: LG10] [Map Location: ] [Description: dynactin subunit 4] [Gene Type: protein-coding]","Dctn4; TcasGA2_TC011388; p62; LOC658992"]
[1585,"NW_015450233.1",614605,"SNV","G","C","Heterozygous",11,21,52.38,1,4,11,0.27,37.09,15,27,5,7,-1.16,0.7,1,"no","C/G","No",1,82.24,"XP_970426.1:c.[639G>C]; XP_015839840.1:c.[639G>C]","XP_970426.1:p.[Glu213Asp]; XP_015839840.1:p.[Glu213Asp]","LOC658992",658992,null,"658992 [Gene Symbol: LOC658992] [Locus Tag: TcasGA2_TC011388] [Chromosome: LG10] [Map Location: ] [Description: dynactin subunit 4] [Gene Type: protein-coding]","Dctn4; TcasGA2_TC011388; p62; LOC658992"]
[1587,"NW_015450233.1",792029,"SNV","A","G","Homozygous",24,24,100,1,19,13,0.41,36.38,32,32,6,15,null,1,1,"no","G/G","No",1,92.92,"XP_015839811.1:c.[4288A>G]; XP_015839816.1:c.[4288A>G]; XP_015839827.1:c.[449-894A>G]; XP_015839826.1:c.[4288A>G]; XP_015839824.1:c.[3838A>G]; XP_015839823.1:c.[3838A>G]; XP_015839812.1:c.[4288A>G]; XP_015839818.1:c.[4288A>G]; XP_015839821.1:c.[3955A>G]; XP_015839814.1:c.[4288A>G]; XP_015839829.1:c.[151+4068A>G]; XP_015839820.1:c.[4288A>G]; XP_015839825.1:c.[4288A>G]; XP_015839819.1:c.[4288A>G]; XP_015839817.1:c.[4288A>G]; XP_015839828.1:c.[448+4068A>G]; XP_015839815.1:c.[4288A>G]; XP_015839813.1:c.[4279A>G]","XP_015839811.1:p.[Ile1430Val]; XP_015839816.1:p.[Ile1430Val]; XP_015839826.1:p.[Ile1430Val]; XP_015839824.1:p.[Ile1280Val]; XP_015839823.1:p.[Ile1280Val]; XP_015839812.1:p.[Ile1430Val]; XP_015839818.1:p.[Ile1430Val]; XP_015839821.1:p.[Ile1319Val]; XP_015839814.1:p.[Ile1430Val]; XP_015839820.1:p.[Ile1430Val]; XP_015839825.1:p.[Ile1430Val]; XP_015839819.1:p.[Ile1430Val]; XP_015839817.1:p.[Ile1430Val]; XP_015839815.1:p.[Ile1430Val]; XP_015839813.1:p.[Ile1427Val]","LOC659365",659365,null,"659365 [Gene Symbol: LOC659365] [Locus Tag: TcasGA2_TC011393] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC659365] [Gene Type: protein-coding]","LOC659365; TcasGA2_TC011393"]
[1588,"NW_015450233.1",801003,"SNV","C","T","Homozygous",20,20,100,1,9,14,0.39,39.55,23,23,9,10,null,1,1,"no","T/T","No",1,82.52,"XP_015839830.1:c.[1792C>T]; XP_015839825.1:c.[6973C>T]; XP_015839814.1:c.[6964C>T]; XP_015839812.1:c.[6973C>T]; XP_015839824.1:c.[6523C>T]; XP_015839811.1:c.[6973C>T]; XP_015839818.1:c.[6907C>T]; XP_015839813.1:c.[6964C>T]; XP_015839821.1:c.[6640C>T]; XP_015839827.1:c.[2323C>T]; XP_015839829.1:c.[1897C>T]; XP_015839817.1:c.[6940C>T]; XP_015839815.1:c.[6973C>T]; XP_015839820.1:c.[6844C>T]; XP_015839816.1:c.[6973C>T]; XP_015839819.1:c.[6874C>T]; XP_015839823.1:c.[6523C>T]; XP_015839826.1:c.[6973C>T]; XP_015839828.1:c.[2194C>T]","XP_015839830.1:p.[Pro598Ser]; XP_015839825.1:p.[Pro2325Ser]; XP_015839814.1:p.[Pro2322Ser]; XP_015839812.1:p.[Pro2325Ser]; XP_015839824.1:p.[Pro2175Ser]; XP_015839811.1:p.[Pro2325Ser]; XP_015839818.1:p.[Pro2303Ser]; XP_015839813.1:p.[Pro2322Ser]; XP_015839821.1:p.[Pro2214Ser]; XP_015839827.1:p.[Pro775Ser]; XP_015839829.1:p.[Pro633Ser]; XP_015839817.1:p.[Pro2314Ser]; XP_015839815.1:p.[Pro2325Ser]; XP_015839820.1:p.[Pro2282Ser]; XP_015839816.1:p.[Pro2325Ser]; XP_015839819.1:p.[Pro2292Ser]; XP_015839823.1:p.[Pro2175Ser]; XP_015839826.1:p.[Pro2325Ser]; XP_015839828.1:p.[Pro732Ser]","LOC659365",659365,null,"659365 [Gene Symbol: LOC659365] [Locus Tag: TcasGA2_TC011393] [Chromosome: LG10] [Map Location: ] [Description: uncharacterized LOC659365] [Gene Type: protein-coding]","LOC659365; TcasGA2_TC011393"]
[1590,"NW_015450233.1",880057,"SNV","T","A","Homozygous",21,21,100,1,16,12,0.43,37.14,28,28,8,13,null,1,1,"no","A/A","No",1,85.5,"XP_015839850.1:c.[1434T>A]; XP_015839851.1:c.[1434T>A]","XP_015839850.1:p.[Asp478Glu]; XP_015839851.1:p.[Asp478Glu]","LOC100141580",100141580,null,"100141580 [Gene Symbol: LOC100141580] [Locus Tag: TcasGA2_TC011399] [Chromosome: LG10] [Map Location: ] [Description: titin] [Gene Type: protein-coding]","LOC100141580; TcasGA2_TC011399"]
[1594,"NW_015450366.1",2793,"SNV","A","G","Heterozygous",21,33,63.64,1,4,20,0.17,38.86,24,36,7,11,0.28,0.17,0.66,"no","A/G","No",1,73.92,"XP_015839906.1:c.[568A>G]; XP_015839907.1:c.[568A>G]; XP_015839908.1:c.[568A>G]","XP_015839906.1:p.[Lys190Glu]; XP_015839907.1:p.[Lys190Glu]; XP_015839908.1:p.[Lys190Glu]","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1600,"NW_015450366.1",2998,"SNV","A","C","Homozygous",42,43,97.67,1,27,30,0.47,37.38,57,58,25,25,null,1,1,"no","C/C","No",1,116.3,"XP_015839907.1:c.[603+170A>C]; XP_015839908.1:c.[603+170A>C]; XP_015839906.1:c.[773A>C]","XP_015839906.1:p.*258Ser","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1601,"NW_015450366.1",4733,"SNV","C","T","Heterozygous",9,27,33.33,1,4,8,0.33,37.89,12,31,4,6,0.46,0.18,0.91,"no","C/T","No",1,52.44,"XP_015839908.1:c.[604-738C>T]; XP_015839907.1:c.[697C>T]","XP_015839907.1:p.His233Tyr","LOC107397419",107397419,null,"107397419 [Gene Symbol: LOC107397419] [Locus Tag: TcasGA2_TC034935] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107397419] [Gene Type: protein-coding]","TcasGA2_TC034935; LOC107397419"]
[1602,"NW_015450423.1",6900,"SNV","C","A","Homozygous",23,23,100,1,16,7,0.3,37.52,23,23,12,12,null,1,1,"no","A/A","No",1,91.52,"XP_001810019.1:c.[2309G>T]; XP_015839912.1:c.[2309G>T]; XP_008200991.1:c.[2309G>T]","XP_001810019.1:p.[Arg770Met]; XP_015839912.1:p.[Arg770Met]; XP_008200991.1:p.[Arg770Met]","LOC100142044",100142044,null,"100142044 [Gene Symbol: LOC100142044] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142044] [Gene Type: protein-coding]","LOC100142044"]
[1603,"NW_015450445.1",765,"SNV","A","C","Homozygous",24,24,100,1,19,10,0.34,38.54,29,29,11,12,null,1,1,"no","C/C","No",1,92.92,"XP_008194639.1:c.318A>C","XP_008194639.1:p.Gln106His","LOC103313364",103313364,null,"103313364 [Gene Symbol: LOC103313364] [Locus Tag: TcasGA2_TC016044] [Chromosome: Un] [Map Location: ] [Description: TLR4 interactor with leucine rich repeats] [Gene Type: protein-coding]","TcasGA2_TC016044; LOC103313364"]
[1604,"NW_015450445.1",886,"SNV","T","C","Homozygous",26,26,100,1,7,19,0.27,37.46,26,26,14,15,null,1,1,"no","C/C","No",1,98.93,"XP_008194639.1:c.439T>C","XP_008194639.1:p.Phe147Leu","LOC103313364",103313364,null,"103313364 [Gene Symbol: LOC103313364] [Locus Tag: TcasGA2_TC016044] [Chromosome: Un] [Map Location: ] [Description: TLR4 interactor with leucine rich repeats] [Gene Type: protein-coding]","TcasGA2_TC016044; LOC103313364"]
[1605,"NW_015450462.1","11547^11548","Insertion","-","T","Homozygous",37,37,100,1,28,19,0.4,37.57,47,47,16,24,null,1,1,"no","T/T","No",1,133.69,"XP_015839928.1:c.299_300insT","XP_015839928.1:p.Arg101fs","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1607,"NW_015450462.1",12310,"SNV","T","C","Homozygous",21,21,100,1,15,11,0.42,37.33,26,26,13,14,null,1,1,"no","C/C","No",1,83.89,"XP_015839928.1:c.871T>C","XP_015839928.1:p.*291Gln","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1609,"NW_015450462.1",12661,"SNV","G","A","Homozygous",41,41,100,1,16,34,0.32,38.29,50,50,14,21,null,1,1,"no","A/A","No",1,145.74,"XP_015839928.1:c.1222G>A","XP_015839928.1:p.Gly408Ser","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1610,"NW_015450462.1",12713,"SNV","G","A","Homozygous",23,23,100,1,6,17,0.26,39.22,23,23,8,12,null,1,1,"no","A/A","No",1,91.51,"XP_015839928.1:c.1274G>A","XP_015839928.1:p.Arg425Gln","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1611,"NW_015450462.1","16948..16949","Deletion","GT","-","Heterozygous",23,37,62.16,1,8,16,0.33,35.7,24,40,11,14,-1.98,0.97,0.98,"no","complex","No",1,200,"XP_015839928.1:c.1508_1509delGT","XP_015839928.1:p.Val504fs","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1613,"NW_015450462.1",18281,"SNV","G","A","Heterozygous",9,20,45,1,0,9,0,39.22,9,23,2,3,1.71,0.09,0.25,"no","A/G","No",1,71.97,"XP_015839928.1:c.2563G>A","XP_015839928.1:p.Ala855Thr","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1616,"NW_015450462.1",21240,"SNV","G","T","Heterozygous",12,27,44.44,1,1,11,0.08,35.67,12,32,5,4,0.05,0.66,0.26,"no","G/T","No",1,86.03,"XP_015839928.1:c.3774G>T","XP_015839928.1:p.Gln1258His","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1617,"NW_015450462.1",21275,"SNV","G","T","Heterozygous",14,25,56,1,7,11,0.39,36.14,18,29,6,10,-3.56,0.36,0.87,"no","G/T","No",1,86.71,"XP_015839928.1:c.3809G>T","XP_015839928.1:p.*1270Leu","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1618,"NW_015450462.1",21339,"SNV","C","A","Heterozygous",9,26,34.62,1,1,8,0.11,37.33,9,27,5,4,-0.67,0.09,0.3,"no","A/C","No",1,50.69,"XP_015839928.1:c.3873C>A","XP_015839928.1:p.Asn1291Lys","LOC658176",658176,null,"658176 [Gene Symbol: LOC658176] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: phosphoribosylformylglycinamidine synthase] [Gene Type: protein-coding]","LOC658176"]
[1620,"NW_015450599.1",12448,"SNV","A","T","Heterozygous",13,22,59.09,1,11,6,0.35,39.85,17,26,5,4,0.63,0.23,0.54,"no","A/T","No",1,66.51,"XP_015839974.1:c.[1203A>T]; XP_008195700.1:c.[783A>T]","XP_015839974.1:p.[Gln401His]; XP_008195700.1:p.[Gln261His]","LOC103313649",103313649,null,"103313649 [Gene Symbol: LOC103313649] [Locus Tag: TcasGA2_TC032692] [Chromosome: Un] [Map Location: ] [Description: putative ankyrin repeat protein RF_0381] [Gene Type: protein-coding]","TcasGA2_TC032692; LOC103313649"]
[1624,"NW_015450678.1",10945,"SNV","C","A","Heterozygous",11,32,34.38,1,0,11,0,36.27,11,32,6,7,0.44,0.2,1,"no","A/C","No",1,59.49,"XP_008193951.1:c.1052G>T","XP_008193951.1:p.Gly351Val","LOC100141955",100141955,null,"100141955 [Gene Symbol: LOC100141955] [Locus Tag: TcasGA2_TC031650] [Chromosome: Un] [Map Location: ] [Description: ORF 1] [Gene Type: protein-coding]","LOC100141955; TcasGA2_TC031650; gag"]
[1625,"NW_015450678.1",11774,"SNV","C","T","Heterozygous",57,241,23.65,1,39,28,0.42,36.33,67,289,17,34,-0.61,0.14,0.8,"no","C/T","No",1,68.07,"XP_008193951.1:c.223G>A","XP_008193951.1:p.Asp75Asn","LOC100141955",100141955,null,"100141955 [Gene Symbol: LOC100141955] [Locus Tag: TcasGA2_TC031650] [Chromosome: Un] [Map Location: ] [Description: ORF 1] [Gene Type: protein-coding]","LOC100141955; TcasGA2_TC031650; gag"]
[1628,"NW_015450712.1",11299,"SNV","C","T","Homozygous",24,24,100,1,14,17,0.45,37.46,31,31,16,16,null,1,1,"no","T/T","No",1,94.55,"XP_015840002.1:c.464G>A","XP_015840002.1:p.Arg155Lys","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1629,"NW_015450712.1",11308,"SNV","G","T","Heterozygous",16,26,61.54,1,9,14,0.39,37.69,23,33,11,11,1.05,0.69,1,"no","G/T","No",1,71.13,"XP_015840002.1:c.455C>A","XP_015840002.1:p.Ser152Tyr","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1630,"NW_015450712.1",11558,"SNV","C","T","Heterozygous",15,26,57.69,1,5,10,0.33,37.33,15,28,5,11,-1.35,0.37,0.76,"no","C/T","No",1,82.52,"XP_015840002.1:c.205G>A","XP_015840002.1:p.Gly69Ser","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1631,"NW_015450712.1",11561,"SNV","C","G","Heterozygous",15,26,57.69,1,5,10,0.33,38.73,15,28,5,11,0.29,0.35,0.76,"no","C/G","No",1,81.56,"XP_015840002.1:c.202G>C","XP_015840002.1:p.Ala68Pro","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1632,"NW_015450712.1","11570^11571","Insertion","-","TGG","Heterozygous",8,26,30.77,1,1,7,0.12,39.38,8,26,4,5,4.43,0.32,0.42,"no","complex","No",1,200,"XP_015840002.1:c.192_193insCCA","XP_015840002.1:p.Pro64_Ser65insPro","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1633,"NW_015450712.1",11659,"SNV","T","A","Heterozygous",14,30,46.67,1,3,13,0.19,39.29,16,34,4,4,0.42,0.07,0.93,"no","A/T","No",1,108.04,"XP_015840002.1:c.104A>T","XP_015840002.1:p.Gln35Leu","LOC107398933",107398933,null,"107398933 [Gene Symbol: LOC107398933] [Locus Tag: TcasGA2_TC010246] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398933] [Gene Type: protein-coding]","LOC107398933; TcasGA2_TC010246"]
[1635,"NW_015450712.1","70039..70040","MNV","AA","GG","Heterozygous",11,22,50,1,3,10,0.23,40.55,13,24,6,6,null,0.2,0.42,"no","complex","No",1,200,"XP_969746.4:c.39_40delTTinsCC","XP_969746.4:p.Phe14Leu","LOC658247",658247,null,"658247 [Gene Symbol: LOC658247] [Locus Tag: TcasGA2_TC010244] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC658247] [Gene Type: protein-coding]","CYP6BR2; CYP6BR3; TcasGA2_TC010244; LOC658247"]
[1638,"NW_015450720.1",50498,"SNV","G","C","Heterozygous",28,62,45.16,1,17,11,0.39,39.11,28,73,10,17,1.51,0.39,1,"no","C/G","No",1,200,"XP_973868.1:c.1479C>G","XP_973868.1:p.His493Gln","LOC662692",662692,null,"662692 [Gene Symbol: LOC662692] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: probable RNA-directed DNA polymerase from transposon X-element] [Gene Type: protein-coding]","LOC662692"]
[1642,"NW_015450792.1",22291,"SNV","C","A","Heterozygous",14,28,50,1,9,9,0.5,37.79,18,36,4,9,-1.52,0.42,0.96,"no","A/C","No",1,108.28,"XP_015840015.1:c.325C>A","XP_015840015.1:p.Gln109Lys","LOC107398947",107398947,null,"107398947 [Gene Symbol: LOC107398947] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398947] [Gene Type: protein-coding]","LOC107398947"]
[1643,"NW_015450792.1",22570,"SNV","T","C","Heterozygous",10,25,40,1,4,6,0.4,37.8,10,27,5,6,-1.55,0.53,0.73,"no","C/T","No",1,72.54,"XP_015840015.1:c.604T>C","XP_015840015.1:p.Phe202Leu","LOC107398947",107398947,null,"107398947 [Gene Symbol: LOC107398947] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398947] [Gene Type: protein-coding]","LOC107398947"]
[1644,"NW_015450792.1",22630,"SNV","G","A","Heterozygous",14,26,53.85,1,8,9,0.47,39.29,17,30,9,9,0.93,0.78,0.86,"no","A/G","No",1,95.22,"XP_015840015.1:c.664G>A","XP_015840015.1:p.Ala222Thr","LOC107398947",107398947,null,"107398947 [Gene Symbol: LOC107398947] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398947] [Gene Type: protein-coding]","LOC107398947"]
[1645,"NW_015450873.1",1750,"SNV","A","G","Heterozygous",12,26,46.15,1,8,7,0.47,37.75,15,32,6,7,-1.08,0.94,1,"no","A/G","No",1,95.2,"XP_015840030.1:c.214A>G","XP_015840030.1:p.Ser72Gly","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1646,"NW_015450873.1",1784,"SNV","G","C","Heterozygous",11,27,40.74,1,4,8,0.33,40.18,12,34,5,7,1.43,0.24,1,"no","C/G","No",1,78.76,"XP_015840030.1:c.248G>C","XP_015840030.1:p.Gly83Ala","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1648,"NW_015450873.1",2341,"SNV","C","T","Heterozygous",14,27,51.85,1,6,12,0.33,37.21,18,33,8,6,0.61,0.17,0.87,"no","C/T","No",1,104.91,"XP_015840030.1:c.805C>T","XP_015840030.1:p.Pro269Ser","LOC107398959",107398959,null,"107398959 [Gene Symbol: LOC107398959] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398959] [Gene Type: protein-coding]","LOC107398959"]
[1649,"NW_015450873.1",11594,"SNV","T","G","Heterozygous",9,22,40.91,1,5,6,0.45,38.56,11,30,7,6,-0.33,0.25,0.93,"no","G/T","No",1,69.51,"XP_015840026.1:c.805A>C","XP_015840026.1:p.Lys269Gln","LOC103315079",103315079,null,"103315079 [Gene Symbol: LOC103315079] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315079] [Gene Type: protein-coding]","LOC103315079"]
[1650,"NW_015450887.1",4298,"SNV","G","T","Heterozygous",8,21,38.1,1,6,6,0.5,39,12,27,6,4,1.41,0.94,1,"no","G/T","No",1,51.71,"XP_015840032.1:c.665C>A","XP_015840032.1:p.Ala222Asp","LOC107398960",107398960,null,"107398960 [Gene Symbol: LOC107398960] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107398960] [Gene Type: protein-coding]","LOC107398960"]
[1656,"NW_015450989.1",150870,"SNV","G","A","Homozygous",21,21,100,1,15,13,0.46,39,28,28,11,15,null,1,1,"no","A/A","No",1,85.5,"XP_015840063.1:c.[593G>A]; XP_015840062.1:c.[593G>A]; XP_015840066.1:c.[593G>A]; XP_015840064.1:c.[593G>A]; XP_015840065.1:c.[593G>A]","XP_015840063.1:p.[Arg198Lys]; XP_015840062.1:p.[Arg198Lys]; XP_015840066.1:p.[Arg198Lys]; XP_015840064.1:p.[Arg198Lys]; XP_015840065.1:p.[Arg198Lys]","LOC657056",657056,null,"657056 [Gene Symbol: LOC657056] [Locus Tag: TcasGA2_TC002002] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC657056; TcasGA2_TC002002"]
[1660,"NW_015451036.1",168518,"Replacement","A","TG","Heterozygous",18,25,72,1,4,18,0.18,37.33,22,29,8,13,3.85,0.89,1,"no","complex","No",1,200,"XP_008193229.1:c.969delTinsCA","XP_008193229.1:p.Pro324fs","LOC660688",660688,null,"660688 [Gene Symbol: LOC660688] [Locus Tag: TcasGA2_TC031811] [Chromosome: Un] [Map Location: ] [Description: proline-rich extensin-like protein EPR1] [Gene Type: protein-coding]","TcasGA2_TC031811; LOC660688"]
[1661,"NW_015451049.1",112703,"SNV","C","A","Homozygous",24,24,100,1,24,2,0.08,38.71,26,26,12,14,null,1,1,"no","A/A","No",1,94.53,"XP_015840124.1:c.536G>T","XP_015840124.1:p.Trp179Leu","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1662,"NW_015451049.1",112999,"SNV","C","A","Homozygous",31,31,100,1,18,22,0.45,37.81,40,40,16,18,null,1,1,"no","A/A","No",1,115.58,"XP_015840124.1:c.240G>T","XP_015840124.1:p.Gln80His","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1663,"NW_015451049.1",113009,"SNV","T","C","Homozygous",35,35,100,1,22,19,0.46,38.89,41,41,15,21,null,1,1,"no","C/C","No",1,126.02,"XP_015840124.1:c.230A>G","XP_015840124.1:p.Lys77Arg","LOC107399003",107399003,null,"107399003 [Gene Symbol: LOC107399003] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399003] [Gene Type: protein-coding]","LOC107399003"]
[1666,"NW_015451053.1",17503,"SNV","G","C","Heterozygous",19,33,57.58,1,11,13,0.46,36.16,24,40,5,13,0.15,0.7,0.65,"no","C/G","No",1,100.08,"XP_008201338.1:c.1012C>G","XP_008201338.1:p.Pro338Ala","LOC656812",656812,null,"656812 [Gene Symbol: LOC656812] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: pair-rule protein odd-paired] [Gene Type: protein-coding]","LOC656812"]
[1668,"NW_015451085.1",8127,"SNV","G","A","Homozygous",23,23,100,1,19,10,0.34,37.04,29,29,11,15,null,1,1,"no","A/A","No",1,91.52,"NP_001164097.1:c.271C>T","NP_001164097.1:p.Pro91Ser","Est-6",658475,"esterase 6","658475 [Gene Symbol: Est-6] [Locus Tag: TcasGA2_TC005190] [Chromosome: Un] [Map Location: ] [Description: esterase 6] [Gene Type: protein-coding]","TcasGA2_TC005190; Est-6"]
[1671,"NW_015451146.1",10931,"SNV","C","T","Heterozygous",22,40,55,1,6,17,0.26,38.68,23,44,6,11,1.69,0.64,0.98,"no","C/T","No",1,132.73,"XP_015840145.1:c.901G>A","XP_015840145.1:p.Ala301Thr","LOC107399018",107399018,null,"107399018 [Gene Symbol: LOC107399018] [Locus Tag: TcasGA2_TC031710] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399018] [Gene Type: protein-coding]","TcasGA2_TC031710; LOC107399018"]
[1672,"NW_015451146.1",13515,"SNV","A","T","Heterozygous",12,26,46.15,1,5,8,0.38,35.92,13,27,6,4,-3.47,0.14,0.26,"no","A/T","No",1,93.75,"XP_008192464.1:c.998T>A","XP_008192464.1:p.Phe333Tyr","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1673,"NW_015451146.1",13579,"Replacement","G","TA","Heterozygous",7,29,24.14,1,0,7,0,38.36,7,29,2,1,0.18,0.02,0.1,"no","complex","No",1,200,"XP_008192464.1:c.934delCinsTA","XP_008192464.1:p.Leu312fs","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1674,"NW_015451146.1",14065,"SNV","C","A","Heterozygous",9,25,36,1,9,0,0,37.89,9,28,4,6,-0.91,0.07,0.13,"no","A/C","No",1,53.48,"XP_008192464.1:c.448G>T","XP_008192464.1:p.Glu150*","LOC103312773",103312773,null,"103312773 [Gene Symbol: LOC103312773] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312773] [Gene Type: protein-coding]","LOC103312773"]
[1676,"NW_015451234.1","12111..12112","MNV","TC","CT","Heterozygous",19,27,70.37,1,17,4,0.19,37.63,21,29,11,17,null,0.63,0.98,"no","complex","No",1,200,"XP_008201045.1:c.1114_1115delGAinsAG","XP_008201045.1:p.Glu372Arg","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1677,"NW_015451234.1",12112,"SNV","C","T","Heterozygous",6,27,22.22,1,3,3,0.5,38,6,29,3,4,null,0.07,0.55,"no","complex","No",1,200,"XP_008201045.1:c.1114G>A","XP_008201045.1:p.Glu372Lys","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1678,"NW_015451234.1",12172,"SNV","C","T","Homozygous",33,34,97.06,1,22,18,0.45,37.91,40,41,17,20,null,1,1,"no","T/T","No",1,88.08,"XP_008201045.1:c.1054G>A","XP_008201045.1:p.Gly352Ser","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1679,"NW_015451234.1",12258,"SNV","G","A","Heterozygous",24,36,66.67,1,12,15,0.44,39.42,27,41,12,15,1.66,0.89,0.94,"no","A/G","No",1,67.39,"XP_008201045.1:c.968C>T","XP_008201045.1:p.Thr323Ile","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1682,"NW_015451234.1",12358,"SNV","A","G","Homozygous",27,27,100,1,2,25,0.07,37.37,27,27,15,13,null,1,1,"no","G/G","No",1,101.95,"XP_008201045.1:c.868T>C","XP_008201045.1:p.Phe290Leu","LOC103315070",103315070,null,"103315070 [Gene Symbol: LOC103315070] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315070] [Gene Type: protein-coding]","LOC103315070"]
[1684,"NW_015451351.1",5161,"SNV","T","C","Heterozygous",22,32,68.75,1,9,17,0.35,38.36,26,37,13,14,-0.16,0.95,1,"no","C/T","No",1,51.3,"XP_015840159.1:c.1027A>G","XP_015840159.1:p.Asn343Asp","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[1686,"NW_015451351.1",5500,"SNV","C","T","Heterozygous",11,20,55,1,7,7,0.5,38.64,14,23,5,5,0.57,0.5,1,"no","C/T","No",1,73.66,"XP_015840159.1:c.688G>A","XP_015840159.1:p.Glu230Lys","LOC107399032",107399032,null,"107399032 [Gene Symbol: LOC107399032] [Locus Tag: TcasGA2_TC006905] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399032] [Gene Type: protein-coding]","TcasGA2_TC006905; LOC107399032"]
[1696,"NW_015451514.1",10095,"SNV","T","C","Homozygous",23,23,100,1,18,7,0.28,38.26,25,25,12,12,null,1,1,"no","C/C","No",1,89.91,"XP_008198617.1:c.[199A>G]; XP_008198667.1:c.[199A>G]","XP_008198617.1:p.[Ile67Val]; XP_008198667.1:p.[Ile67Val]","LOC100141865",100141865,null,"100141865 [Gene Symbol: LOC100141865] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100141865] [Gene Type: protein-coding]","LOC100141865"]
[1698,"NW_015451620.1",32175,"SNV","C","T","Homozygous",25,25,100,1,24,1,0.04,37.68,25,25,9,14,null,1,1,"no","T/T","No",1,97.56,"XP_969078.1:c.[824G>A]; XP_015840245.1:c.[18+3124C>T]","XP_969078.1:p.Arg275Gln","LOC103314469, LOC657529","103314469 , 657529",null,"103314469 [Gene Symbol: LOC103314469] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314469] [Gene Type: protein-coding] || 657529 [Gene Symbol: LOC657529] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: WD repeat-containing protein 63] [Gene Type: protein-coding]","LOC103314469 || LOC657529"]
[1703,"NW_015451687.1",88244,"SNV","C","T","Homozygous",49,53,92.45,1,34,20,0.37,37.22,54,58,22,35,null,1,1,"no","T/T","No",1,82.07,"XP_008197770.1:c.[2114+22406C>T]; XP_015840269.1:c.[295G>A]; XP_015840265.1:c.[2114+22406C>T]; XP_008197805.1:c.[1643+22406C>T]","XP_015840269.1:p.Gly99Arg","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[1704,"NW_015451687.1",88352,"SNV","T","C","Homozygous",63,65,96.92,1,42,26,0.38,38.14,68,70,23,28,null,1,1,"no","C/C","No",1,151.09,"XP_015840265.1:c.[2114+22514T>C]; XP_015840270.1:c.[202A>G]; XP_015840269.1:c.[225+36A>G]; XP_008197805.1:c.[1643+22514T>C]; XP_008197770.1:c.[2114+22514T>C]","XP_015840270.1:p.Thr68Ala","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[1705,"NW_015451687.1",88390,"SNV","T","C","Homozygous",68,71,95.77,1,29,44,0.4,36.28,73,76,30,31,null,1,1,"no","C/C","No",1,147.78,"XP_015840269.1:c.[223A>G]; XP_008197805.1:c.[1643+22552T>C]; XP_008197770.1:c.[2114+22552T>C]; XP_015840270.1:c.[164A>G]; XP_015840265.1:c.[2114+22552T>C]","XP_015840269.1:p.[Ile75Val]; XP_015840270.1:p.[Asn55Ser]","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[1706,"NW_015451687.1",88411,"SNV","C","G","Homozygous",76,79,96.2,1,22,63,0.26,37.66,85,88,32,33,null,1,1,"no","G/G","No",1,200,"XP_015840265.1:c.[2114+22573C>G]; XP_015840269.1:c.[202G>C]; XP_015840270.1:c.[143G>C]; XP_008197805.1:c.[1643+22573C>G]; XP_008197770.1:c.[2114+22573C>G]","XP_015840269.1:p.[Glu68Gln]; XP_015840270.1:p.[Arg48Thr]","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[1707,"NW_015451687.1",88420,"SNV","C","A","Homozygous",76,79,96.2,1,23,62,0.27,38.25,85,88,31,33,null,1,1,"no","A/A","No",1,156.54,"XP_015840270.1:c.[134G>T]; XP_008197770.1:c.[2114+22582C>A]; XP_015840265.1:c.[2114+22582C>A]; XP_015840269.1:c.[193G>T]; XP_008197805.1:c.[1643+22582C>A]","XP_015840270.1:p.[Cys45Phe]; XP_015840269.1:p.[Val65Phe]","LOC655404, LOC107399103","655404 , 107399103",null,"655404 [Gene Symbol: LOC655404] [Locus Tag: TcasGA2_TC031089] [Chromosome: Un] [Map Location: ] [Description: exportin-4] [Gene Type: protein-coding] || 107399103 [Gene Symbol: LOC107399103] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399103] [Gene Type: protein-coding]","LOC655404; TcasGA2_TC031089 || LOC107399103"]
[1708,"NW_015451687.1",256716,"SNV","G","A","Homozygous",28,28,100,1,11,25,0.31,38.89,36,36,13,13,null,1,1,"no","A/A","No",1,106.56,"XP_008198234.1:c.[500C>T]; XP_008198284.1:c.[500C>T]","XP_008198234.1:p.[Thr167Ile]; XP_008198284.1:p.[Thr167Ile]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[1709,"NW_015451687.1",256733,"SNV","G","C","Homozygous",31,31,100,1,15,21,0.42,38,36,36,15,18,null,1,1,"no","C/C","No",1,113.98,"XP_008198234.1:c.[483C>G]; XP_008198284.1:c.[483C>G]","XP_008198234.1:p.[Asp161Glu]; XP_008198284.1:p.[Asp161Glu]","LOC103314306",103314306,null,"103314306 [Gene Symbol: LOC103314306] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103314306] [Gene Type: protein-coding]","LOC103314306"]
[1711,"NW_015451694.1",19578,"SNV","T","A","Heterozygous",14,40,35,1,7,8,0.47,38.14,15,41,8,13,0.74,0.94,1,"no","A/T","No",1,80.19,"XP_015840273.1:c.1040A>T","XP_015840273.1:p.Asn347Ile","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[1712,"NW_015451694.1",20302,"SNV","C","T","Heterozygous",15,38,39.47,1,14,5,0.26,38.8,19,47,10,10,-0.84,0.44,0.83,"no","C/T","No",1,98.34,"XP_015840273.1:c.316G>A","XP_015840273.1:p.Glu106Lys","LOC107399108",107399108,null,"107399108 [Gene Symbol: LOC107399108] [Locus Tag: TcasGA2_TC033503] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399108] [Gene Type: protein-coding]","LOC107399108; TcasGA2_TC033503"]
[1714,"NW_015451702.1",63408,"SNV","T","C","Homozygous",25,25,100,1,7,20,0.26,37.6,27,27,5,14,null,1,1,"no","C/C","No",1,95.92,"XP_968788.2:c.6833A>G","XP_968788.2:p.Asn2278Ser","LOC657224",657224,null,"657224 [Gene Symbol: LOC657224] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: remodeling and spacing factor 1] [Gene Type: protein-coding]","LOC657224"]
[1715,"NW_015451702.1",126415,"SNV","C","A","Homozygous",24,24,100,1,3,21,0.12,37.42,24,24,5,11,null,1,1,"no","A/A","No",1,94.52,"XP_015840277.1:c.304C>A","XP_015840277.1:p.Pro102Thr","LOC107399111",107399111,null,"107399111 [Gene Symbol: LOC107399111] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399111] [Gene Type: protein-coding]","LOC107399111"]
[1716,"NW_015451702.1",216730,"SNV","T","G","Homozygous",21,21,100,1,8,15,0.35,36.05,23,23,11,13,null,1,1,"no","G/G","No",1,83.89,"XP_015840281.1:c.445T>G","XP_015840281.1:p.Leu149Val","LOC107399113",107399113,null,"107399113 [Gene Symbol: LOC107399113] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399113] [Gene Type: protein-coding]","LOC107399113"]
[1719,"NW_015451782.1",41563,"SNV","A","T","Heterozygous",11,35,31.43,1,6,5,0.45,40.27,11,35,3,6,0.76,0.31,0.96,"no","A/T","No",1,55.86,"XP_015840326.1:c.269T>A","XP_015840326.1:p.Ile90Asn","LOC107399134",107399134,null,"107399134 [Gene Symbol: LOC107399134] [Locus Tag: TcasGA2_TC004339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399134] [Gene Type: protein-coding]","LOC107399134; TcasGA2_TC004339"]
[1720,"NW_015451782.1",41654,"SNV","T","C","Heterozygous",10,25,40,1,0,10,0,40.8,10,30,5,3,3.77,0.27,0.33,"no","C/T","No",1,72.54,"XP_015840326.1:c.178A>G","XP_015840326.1:p.Ile60Val","LOC107399134",107399134,null,"107399134 [Gene Symbol: LOC107399134] [Locus Tag: TcasGA2_TC004339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399134] [Gene Type: protein-coding]","LOC107399134; TcasGA2_TC004339"]
[1721,"NW_015451782.1",41750,"SNV","T","A","Heterozygous",9,23,39.13,1,0,9,0,37.89,9,25,4,5,-0.5,0.07,0.03,"no","A/T","No",1,63.72,"XP_015840326.1:c.82A>T","XP_015840326.1:p.Ile28Phe","LOC107399134",107399134,null,"107399134 [Gene Symbol: LOC107399134] [Locus Tag: TcasGA2_TC004339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399134] [Gene Type: protein-coding]","LOC107399134; TcasGA2_TC004339"]
[1722,"NW_015451788.1",4528,"SNV","T","G","Heterozygous",12,35,34.29,1,1,12,0.08,39.17,13,42,4,6,1.16,0.08,0.1,"no","G/T","No",1,71.63,"XP_008201200.1:c.38T>G","XP_008201200.1:p.Val13Gly","LOC103315116",103315116,null,"103315116 [Gene Symbol: LOC103315116] [Locus Tag: TcasGA2_TC031671] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103315116] [Gene Type: protein-coding]","TcasGA2_TC031671; LOC103315116"]
[1723,"NW_015451823.1",2541,"SNV","C","T","Homozygous",21,21,100,1,10,11,0.48,36.9,21,21,8,13,null,1,1,"no","T/T","No",1,85.53,"XP_973052.1:c.146G>A","XP_973052.1:p.Gly49Glu","LOC661821",661821,null,"661821 [Gene Symbol: LOC661821] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: methyltransferase-like protein 16 homolog] [Gene Type: protein-coding]","LOC661821"]
[1724,"NW_015451896.1",3973,"SNV","C","T","Heterozygous",9,27,33.33,1,4,5,0.44,37,9,29,4,5,-1.11,0.32,0.67,"no","C/T","No",1,52.57,"XP_015840345.1:c.1141C>T","XP_015840345.1:p.Pro381Ser","LOC107399154",107399154,null,"107399154 [Gene Symbol: LOC107399154] [Locus Tag: TcasGA2_TC035031] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399154] [Gene Type: protein-coding]","TcasGA2_TC035031; LOC107399154"]
[1726,"NW_015451916.1",2575,"SNV","C","T","Homozygous",119,119,100,1,68,64,0.48,37.15,132,132,40,54,null,1,1,"no","T/T","No",1,200,"XP_015840352.1:c.470C>T","XP_015840352.1:p.Pro157Leu","LOC107399160",107399160,null,"107399160 [Gene Symbol: LOC107399160] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399160] [Gene Type: protein-coding]","LOC107399160"]
[1729,"NW_015451977.1",1603,"SNV","C","T","Heterozygous",20,49,40.82,1,6,15,0.29,36.65,21,53,6,12,-0.26,0.07,0.39,"no","C/T","No",1,131.38,"XP_015840401.1:c.[466C>T]; XP_008197342.1:c.[466C>T]; XP_015840400.1:c.[466C>T]","XP_015840401.1:p.[Leu156Phe]; XP_008197342.1:p.[Leu156Phe]; XP_015840400.1:p.[Leu156Phe]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1730,"NW_015451977.1",1778,"Deletion","G","-","Homozygous",57,57,100,1,36,37,0.49,36.95,73,73,21,36,null,1,1,"no","-/-","No",1,200,"XP_008197342.1:c.[641delG]; XP_015840400.1:c.[641delG]; XP_015840401.1:c.[641delG]","XP_008197342.1:p.[Glu215fs]; XP_015840400.1:p.[Glu215fs]; XP_015840401.1:p.[Glu215fs]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1731,"NW_015451977.1","1788..1789","MNV","GA","AG","Heterozygous",51,66,77.27,1,30,37,0.45,36.98,67,82,22,37,3.64,0.94,1,"no","complex","No",1,200,"XP_008197342.1:c.[651_652delGAinsAG]; XP_015840400.1:c.[651_652delGAinsAG]; XP_015840401.1:c.[651_652delGAinsAG]","XP_008197342.1:p.[Thr218Ala]; XP_015840400.1:p.[Thr218Ala]; XP_015840401.1:p.[Thr218Ala]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1732,"NW_015451977.1",1904,"SNV","G","A","Heterozygous",18,47,38.3,1,15,5,0.25,35.17,20,50,13,13,-0.68,0.44,0.53,"no","A/G","No",1,111.66,"XP_015840400.1:c.[767G>A]; XP_008197342.1:c.[747+20G>A]; XP_015840401.1:c.[767G>A]","XP_015840400.1:p.[Arg256His]; XP_015840401.1:p.[Arg256His]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1733,"NW_015451977.1",2015,"SNV","C","T","Heterozygous",14,24,58.33,1,7,11,0.39,37.79,18,29,8,12,0,0.68,1,"no","C/T","No",1,75.32,"XP_015840400.1:c.[878C>T]; XP_008197342.1:c.[747+131C>T]; XP_015840401.1:c.[878C>T]","XP_015840400.1:p.[Pro293Leu]; XP_015840401.1:p.[Pro293Leu]","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1740,"NW_015451977.1",2952,"SNV","A","T","Heterozygous",25,39,64.1,1,13,20,0.39,35.92,33,47,12,12,0.22,0.88,0.78,"no","A/T","No",1,83.05,"XP_015840400.1:c.[1815A>T]; XP_008197342.1:c.[748-741A>T]","XP_015840400.1:p.Lys605Asn","LOC663685",663685,null,"663685 [Gene Symbol: LOC663685] [Locus Tag: TcasGA2_TC035037] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC663685] [Gene Type: protein-coding]","LOC663685; TcasGA2_TC035037; ORF1p"]
[1741,"NW_015452036.1","37424^37425","Insertion","-","C","Heterozygous",10,26,38.46,1,5,8,0.38,40.1,13,32,4,4,1.95,0.08,0.62,"no","-/C","No",1,61.02,"XP_015840418.1:c.34_35insC","XP_015840418.1:p.Glu12fs","LOC103312967",103312967,null,"103312967 [Gene Symbol: LOC103312967] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312967] [Gene Type: protein-coding]","LOC103312967"]
[1743,"NW_015452070.1","7083..7085","Deletion","AGA","-","Heterozygous",6,22,27.27,1,2,5,0.29,35.5,7,23,5,6,-1.99,0.11,0.99,"no","complex","No",1,200,"XP_008194847.1:c.[1761_1763delAGA]; XP_008194859.1:c.[1722_1724delAGA]; XP_008194842.1:c.[1770_1772delAGA]; XP_008194851.1:c.[1722_1724delAGA]; XP_008194863.1:c.[1476_1478delAGA]","XP_008194847.1:p.[Glu593del]; XP_008194859.1:p.[Glu580del]; XP_008194842.1:p.[Glu596del]; XP_008194851.1:p.[Glu580del]; XP_008194863.1:p.[Glu498del]","LOC103313415",103313415,null,"103313415 [Gene Symbol: LOC103313415] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: glutamic acid-rich protein] [Gene Type: protein-coding]","LOC103313415"]
[1744,"NW_015452075.1",5456,"SNV","C","T","Homozygous",25,25,100,1,23,5,0.18,37.76,28,28,11,19,null,1,1,"no","T/T","No",1,97.56,"XP_008191547.1:c.515G>A","XP_008191547.1:p.Arg172His","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[1745,"NW_015452075.1",5574,"SNV","T","C","Homozygous",30,30,100,1,19,15,0.44,38.73,34,34,14,17,null,1,1,"no","C/C","No",1,110.98,"XP_008191547.1:c.397A>G","XP_008191547.1:p.Lys133Glu","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[1746,"NW_015452075.1",5782,"SNV","A","C","Homozygous",27,27,100,1,17,18,0.49,37.41,35,35,15,15,null,1,1,"no","C/C","No",1,101.95,"XP_008191547.1:c.189T>G","XP_008191547.1:p.Cys63Trp","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[1748,"NW_015452075.1",5948,"SNV","A","G","Homozygous",40,40,100,1,16,32,0.33,37.67,48,48,19,20,null,1,1,"no","G/G","No",1,140.97,"XP_008191547.1:c.23T>C","XP_008191547.1:p.Ile8Thr","LOC103312512",103312512,null,"103312512 [Gene Symbol: LOC103312512] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC103312512] [Gene Type: protein-coding]","LOC103312512"]
[1752,"NW_015452103.1",781,"SNV","C","T","Homozygous",64,64,100,1,16,56,0.22,37.78,72,72,23,33,null,1,1,"no","T/T","No",1,200,"XP_008198969.1:c.223C>T","XP_008198969.1:p.Arg75Cys","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1753,"NW_015452103.1",820,"SNV","A","G","Homozygous",59,59,100,1,21,45,0.32,39.05,66,66,21,29,null,1,1,"no","G/G","No",1,200,"XP_008198969.1:c.262A>G","XP_008198969.1:p.Ile88Val","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1754,"NW_015452103.1",886,"SNV","A","G","Homozygous",49,49,100,1,37,20,0.35,37.78,57,57,18,25,null,1,1,"no","G/G","No",1,200,"XP_008198969.1:c.328A>G","XP_008198969.1:p.Ser110Gly","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1756,"NW_015452103.1",947,"SNV","T","C","Homozygous",42,42,100,1,30,14,0.32,36.95,44,44,16,27,null,1,1,"no","C/C","No",1,146.54,"XP_008198969.1:c.389T>C","XP_008198969.1:p.Met130Thr","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1757,"NW_015452103.1",1126,"SNV","A","G","Homozygous",62,62,100,1,27,45,0.38,37.13,72,72,22,28,null,1,1,"no","G/G","No",1,159.55,"XP_008198969.1:c.568A>G","XP_008198969.1:p.Ile190Val","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1758,"NW_015452103.1",1203,"Deletion","G","-","Homozygous",57,57,100,1,21,41,0.34,37.14,62,62,24,32,null,1,1,"no","-/-","No",1,200,"XP_008198969.1:c.645delG","XP_008198969.1:p.Ala216fs","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1759,"NW_015452103.1",1238,"SNV","T","C","Homozygous",32,32,100,1,19,23,0.45,35.69,42,42,20,22,null,1,1,"no","C/C","No",1,116.99,"XP_008198969.1:c.680T>C","XP_008198969.1:p.Leu227Pro","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1760,"NW_015452103.1",1250,"SNV","A","G","Homozygous",42,42,100,1,28,24,0.46,37.55,52,52,22,28,null,1,1,"no","G/G","No",1,147.5,"XP_008198969.1:c.692A>G","XP_008198969.1:p.Asn231Ser","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1761,"NW_015452103.1",1259,"SNV","C","A","Homozygous",41,41,100,1,28,20,0.42,36.29,48,48,23,27,null,1,1,"no","A/A","No",1,142.39,"XP_008198969.1:c.701C>A","XP_008198969.1:p.Thr234Asn","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1762,"NW_015452103.1",1273,"SNV","T","A","Homozygous",49,49,100,1,31,38,0.45,37.9,69,69,23,27,null,1,1,"no","A/A","No",1,200,"XP_008198969.1:c.715T>A","XP_008198969.1:p.*239Lys","LOC103314496",103314496,null,"103314496 [Gene Symbol: LOC103314496] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: hypothetical protein] [Gene Type: protein-coding]","LOC103314496"]
[1765,"NW_015452142.1",23917,"SNV","G","A","Heterozygous",14,34,41.18,1,4,11,0.27,39.43,15,40,6,7,0.44,0.32,0.98,"no","A/G","No",1,96.72,"XP_008200958.2:c.632C>T","XP_008200958.2:p.Ser211Phe","LOC103315049",103315049,null,"103315049 [Gene Symbol: LOC103315049] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: putative nuclease HARBI1] [Gene Type: protein-coding]","LOC103315049"]
[1767,"NW_015452142.1",26953,"SNV","A","G","Heterozygous",14,20,70,1,11,3,0.21,37.57,14,20,7,6,null,0.22,0.49,"no","complex","No",1,200,"XP_015840428.1:c.215T>C","XP_015840428.1:p.Leu72Ser","LOC107399187",107399187,null,"107399187 [Gene Symbol: LOC107399187] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399187] [Gene Type: protein-coding]","LOC107399187"]
[1768,"NW_015452165.1","17630..17632","Deletion","GAG","-","Heterozygous",13,40,32.5,1,8,8,0.5,38.85,16,46,10,11,4.32,0.22,0.44,"no","complex","No",1,200,"XP_015840431.1:c.175_177delGAG","XP_015840431.1:p.Glu60del","LOC107399193",107399193,null,"107399193 [Gene Symbol: LOC107399193] [Locus Tag: TcasGA2_TC031256] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399193] [Gene Type: protein-coding]","TcasGA2_TC031256; LOC107399193"]
[1769,"NW_015452165.1",17702,"SNV","A","G","Heterozygous",42,85,49.41,1,40,13,0.25,38.1,53,104,21,28,-0.5,0.48,0.6,"no","A/G","No",1,200,"XP_015840431.1:c.247A>G","XP_015840431.1:p.Lys83Glu","LOC107399193",107399193,null,"107399193 [Gene Symbol: LOC107399193] [Locus Tag: TcasGA2_TC031256] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399193] [Gene Type: protein-coding]","TcasGA2_TC031256; LOC107399193"]
[1773,"NW_015452199.1",1777,"SNV","T","A","Heterozygous",9,21,42.86,1,0,9,0,39.44,9,21,4,5,0.6,0.83,0.69,"no","A/T","No",1,69.28,"XP_015840435.1:c.395T>A","XP_015840435.1:p.Val132Glu","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[1774,"NW_015452199.1",1794,"SNV","A","G","Heterozygous",9,21,42.86,1,0,9,0,40,9,21,4,5,2.52,0.52,0.69,"no","A/G","No",1,70.84,"XP_015840435.1:c.412A>G","XP_015840435.1:p.Thr138Ala","LOC107399196",107399196,null,"107399196 [Gene Symbol: LOC107399196] [Locus Tag: TcasGA2_TC004221] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399196] [Gene Type: protein-coding]","TcasGA2_TC004221; LOC107399196"]
[1777,"NW_015452265.1",9227,"SNV","G","A","Homozygous",47,47,100,1,19,31,0.38,38,50,50,24,24,null,1,1,"no","A/A","No",1,200,"XP_015840446.1:c.2642G>A","XP_015840446.1:p.Cys881Tyr","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[1778,"NW_015452265.1",9493,"SNV","A","C","Homozygous",24,25,96,1,10,18,0.36,39.08,28,30,15,15,null,1,1,"no","C/C","No",1,65.55,"XP_015840446.1:c.2908A>C","XP_015840446.1:p.Ile970Leu","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[1779,"NW_015452265.1",9527,"SNV","A","G","Homozygous",25,25,100,1,13,19,0.41,37.28,32,32,14,19,null,1,1,"no","G/G","No",1,95.92,"XP_015840446.1:c.2942A>G","XP_015840446.1:p.Asp981Gly","LOC107399201",107399201,null,"107399201 [Gene Symbol: LOC107399201] [Locus Tag: TcasGA2_TC033491] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC107399201] [Gene Type: protein-coding]","TcasGA2_TC033491; LOC107399201"]
[1780,"NW_015452276.1",38834,"SNV","G","C","Homozygous",22,22,100,1,4,21,0.16,35.82,25,25,7,7,null,1,1,"no","C/C","No",1,86.9,"XP_015840458.1:c.1298G>C","XP_015840458.1:p.Ser433Thr","LOC656900",656900,null,"656900 [Gene Symbol: LOC656900] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: gastrulation defective protein 1 homolog] [Gene Type: protein-coding]","LOC656900"]
[1781,"NW_015452276.1",117699,"SNV","A","C","Homozygous",21,21,100,1,8,18,0.31,36.05,26,26,3,5,null,1,1,"no","C/C","No",1,83.89,"XP_969008.2:c.2245A>C","XP_969008.2:p.Ile749Leu","LOC657455",657455,null,"657455 [Gene Symbol: LOC657455] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: small subunit processome component 20 homolog] [Gene Type: protein-coding]","LOC657455"]
[1782,"NW_015452276.1",119709,"SNV","T","C","Homozygous",20,20,100,1,12,15,0.44,38.05,27,27,10,13,null,1,1,"no","C/C","No",1,80.88,"XP_969008.2:c.4151T>C","XP_969008.2:p.Val1384Ala","LOC657455",657455,null,"657455 [Gene Symbol: LOC657455] [Locus Tag: ] [Chromosome: Un] [Map Location: ] [Description: small subunit processome component 20 homolog] [Gene Type: protein-coding]","LOC657455"]
[1783,"NW_015452276.1",203149,"SNV","A","G","Heterozygous",10,24,41.67,1,3,10,0.23,35.2,13,27,3,4,-3.13,0.06,0.97,"no","A/G","No",1,75.28,"XP_015840450.1:c.3436T>C","XP_015840450.1:p.Phe1146Leu","LOC100142253",100142253,null,"100142253 [Gene Symbol: LOC100142253] [Locus Tag: TcasGA2_TC002339] [Chromosome: Un] [Map Location: ] [Description: uncharacterized LOC100142253] [Gene Type: protein-coding]","TcasGA2_TC002339; LOC100142253"]
[1785,"NC_003081.2",686,"SNV","G","A","Homozygous",1034,1050,98.48,1,548,617,0.47,39.11,1165,1186,182,156,null,1,1,"no","A/A","No",1,159.55,"NP_203156.1:c.484G>A","NP_203156.1:p.Gly162Arg","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[1786,"NC_003081.2",807,"SNV","G","C","Homozygous",922,922,100,1,533,571,0.48,38.59,1104,1104,175,148,null,1,1,"no","C/C","No",1,200,"NP_203156.1:c.605G>C","NP_203156.1:p.*202Ser","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[1787,"NC_003081.2",925,"SNV","G","C","Homozygous",1085,1088,99.72,1,676,581,0.46,38.68,1257,1260,175,165,null,1,1,"no","C/C","No",1,200,"NP_203156.1:c.723G>C","NP_203156.1:p.Leu241Phe","ND2",803823,null,"803823 [Gene Symbol: ND2] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 2] [Gene Type: protein-coding]","ND2"]
[1788,"NC_003081.2",2381,"SNV","G","C","Homozygous",1257,1260,99.76,1,730,768,0.49,38.8,1498,1501,181,168,null,1,1,"no","C/C","No",1,200,"NP_258414.1:c.987G>C","NP_258414.1:p.Gln329His","COX1",803829,null,"803829 [Gene Symbol: COX1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome c oxidase subunit I] [Gene Type: protein-coding]","COX1"]
[1789,"NC_003081.2","3997^3998","Insertion","-","AAC","Homozygous",1114,1115,99.91,1,613,716,0.46,38.66,1329,1330,178,166,null,1,1,"no","AAC/AAC","No",1,200,"NP_203158.1:c.134_135insAAC","NP_203158.1:p.Thr46_Ile47insThr","ATP8",803827,null,"803827 [Gene Symbol: ATP8] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: ATP synthase F0 subunit 8] [Gene Type: protein-coding]","ATP8"]
[1790,"NC_003081.2",4930,"SNV","A","G","Homozygous",1174,1186,98.99,1,658,715,0.48,38.6,1373,1386,171,160,null,1,1,"no","G/G","No",1,200,"NP_203160.2:c.247A>G","NP_203160.2:p.Ile83Val","COX3",803825,null,"803825 [Gene Symbol: COX3] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome c oxidase subunit III] [Gene Type: protein-coding]","COX3"]
[1791,"NC_003081.2","5591^5592","Insertion","-","T","Homozygous",901,902,99.89,1,525,550,0.49,37.95,1075,1076,170,145,null,1,1,"no","T/T","No",1,200,"NP_203161.1:c.65_66insT","NP_203161.1:p.*22fs","ND3",803821,null,"803821 [Gene Symbol: ND3] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 3] [Gene Type: protein-coding]","ND3"]
[1792,"NC_003081.2",6515,"SNV","C","T","Homozygous",949,963,98.55,1,579,558,0.49,38.66,1137,1153,174,161,null,1,1,"no","T/T","No",1,159.55,"NP_203162.1:c.1462G>A","NP_203162.1:p.Gly488Arg","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[1793,"NC_003081.2",6956,"SNV","T","A","Homozygous",1136,1136,100,1,695,621,0.47,38.38,1316,1316,178,160,null,1,1,"no","A/A","No",1,200,"NP_203162.1:c.1021A>T","NP_203162.1:p.Asn341Tyr","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[1794,"NC_003081.2",7444,"SNV","G","A","Homozygous",1193,1196,99.75,1,726,689,0.49,39.08,1415,1418,179,173,null,1,1,"no","A/A","No",1,200,"NP_203162.1:c.533C>T","NP_203162.1:p.Ser178Phe","ND5",803820,null,"803820 [Gene Symbol: ND5] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 5] [Gene Type: protein-coding]","ND5"]
[1795,"NC_003081.2",8651,"SNV","C","T","Homozygous",1023,1023,100,1,583,614,0.49,37.55,1197,1197,171,164,null,1,1,"no","T/T","No",1,200,"NP_203163.1:c.721G>A","NP_203163.1:p.Ala241Thr","ND4",803822,null,"803822 [Gene Symbol: ND4] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 4] [Gene Type: protein-coding]","ND4"]
[1796,"NC_003081.2",11283,"SNV","C","T","Homozygous",1132,1132,100,1,602,728,0.45,38.83,1330,1330,171,164,null,1,1,"no","T/T","No",1,200,"NP_203166.1:c.1004C>T","NP_203166.1:p.Pro335Leu","CYTB",803817,null,"803817 [Gene Symbol: CYTB] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: cytochrome b] [Gene Type: protein-coding]","CYTB"]
[1797,"NC_003081.2",11571,"SNV","A","G","Homozygous",988,989,99.9,1,608,541,0.47,38.23,1149,1150,171,154,null,1,1,"no","G/G","No",1,200,"NP_203167.1:c.886T>C","NP_203167.1:p.Ser296Pro","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[1798,"NC_003081.2",11787,"SNV","C","T","Homozygous",1011,1011,100,1,620,561,0.48,38.63,1181,1181,170,159,null,1,1,"no","T/T","No",1,200,"NP_203167.1:c.670G>A","NP_203167.1:p.Gly224Arg","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[1799,"NC_003081.2",11874,"SNV","C","T","Homozygous",1052,1052,100,1,547,700,0.44,38.39,1247,1247,172,158,null,1,1,"no","T/T","No",1,200,"NP_203167.1:c.583G>A","NP_203167.1:p.Val195Ile","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]
[1800,"NC_003081.2",12188,"SNV","G","A","Homozygous",1089,1109,98.2,1,637,641,0.5,38.5,1278,1304,175,164,null,1,1,"no","A/A","No",1,200,"NP_203167.1:c.269C>T","NP_203167.1:p.Ala90Val","ND1",803824,null,"803824 [Gene Symbol: ND1] [Locus Tag: ] [Chromosome: MT] [Map Location: ] [Description: NADH dehydrogenase subunit 1] [Gene Type: protein-coding]","ND1"]