{"text_format":"3","workbook":"xlsx","n_sheets":13,"sheets":["Peak calling description","H3K4me3 InOV-1","H3K4me3 InOV-2","H3K4me3 InOV-3","H3K4me3 PreOV-1","H3K4me3 PreOV-2","H3K4me3 PreOV-3","H3K27me3 InOV-1","H3K27me3 InOV-2","H3K27me3 InOV-3","H3K27me3 PreOV-1","H3K27me3 PreOV-2","H3K27me3 PreOV-3"],"not_rendered":{"images":1},"read":"whole","date_system":"1900"}

{"sheet":"Peak calling description","index":0,"n_rows":8,"n_cols":5,"rows_kept":8}
[null,"H3K4me3 peak calling",null,"H3K27me3 peak calling"]
["Samples Vs. Input","Peak calling tags","Total tags","Peak calling tags","Total tags"]
["PreOV-1",{"v":260741,"d":"260,741"},{"v":10120900,"d":"10,120,900"},{"v":26718,"d":"26,718"},{"v":11875059,"d":"11,875,059"}]
["PreOV-2",{"v":33922,"d":"33,922"},{"v":13190944,"d":"13,190,944"},{"v":11742,"d":"11,742"},{"v":15348546,"d":"15,348,546"}]
["PreOV-3",{"v":196891,"d":"196,891"},{"v":10920974,"d":"10,920,974"},{"v":18204,"d":"18,204"},{"v":15095060,"d":"15,095,060"}]
["InOV-1",{"v":54906,"d":"54,906"},{"v":16347368,"d":"16,347,368"},{"v":55554,"d":"55,554"},{"v":10125136,"d":"10,125,136"}]
["InOV-2",{"v":110487,"d":"110,487"},{"v":12199583,"d":"12,199,583"},{"v":82516,"d":"82,516"},{"v":5119000,"d":"5,119,000"}]
["InOV-3",{"v":499406,"d":"499,406"},{"v":14702476,"d":"14,702,476"},{"v":24115,"d":"24,115"},{"v":14384392,"d":"14,384,392"}]

{"sheet":"H3K4me3 InOV-1","index":1,"n_rows":1709,"n_cols":9,"rows_kept":1709}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = In-3_vs_In-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = In-3_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = In-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 149 bps"]
["# total tags in treatment: 16498514"]
["# tags after filtering in treatment: 16347368"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.01"]
["# total tags in control: 19271120"]
["# tags after filtering in control: 19123479"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 297"]
["chr","start","end","length","summit","tags",{"$error":"#NAME?"},"fold_enrichment","FDR(%)"]
["GL892411-2",35504,36310,807,374,19,55.42,5.19,81.97]
["GL892447-1",23779,27205,3427,679,80,64.47,5.51,100]
["GL892680-2",104514,105376,863,571,18,46.02,5.19,38.54]
["GL892755-1",21254,22049,796,508,16,40.32,6.13,26.01]
["GL892789-1",66810,67833,1024,317,24,45.87,5.37,38.36]
["GL893064-1",24792,25669,878,284,17,40.11,5.19,25.75]
["GL893065-2",55147,55997,851,596,17,41.78,4.24,28.99]
["GL893128-1",48396,49409,1014,595,21,51.21,5.66,60.43]
["GL893196-1",23190,24253,1064,477,21,43.32,6.13,32.18]
["GL893307-1",4600,5385,786,243,16,40.96,6.13,26.91]
["GL893311-1",149212,149678,467,233,40,359.98,18.87,100]
["GL893313-2",114622,115519,898,419,18,43.75,5.19,33.83]
["GL893483-1",10717,11557,841,580,17,42.42,5.19,29.49]
["GL893565-1",8783,9558,776,284,16,41.62,5.19,28.61]
["GL893789-2",16373,17224,852,615,19,52.01,6.13,63.27]
["GL893851-2",59679,60496,818,538,18,49.13,5.66,49.4]
["GL893911-1",48586,49298,713,432,15,40.73,5.66,26.67]
["GL893935-1",64841,66202,1362,712,23,41,7.07,27.08]
["GL894077-1",63291,64570,1280,711,27,63.88,5.66,100]
["GL894080-1",12194,13141,948,531,19,45.52,5.19,37.67]
["GL894231-1",1594,2340,747,358,16,43.6,5.19,33.11]
["GL894251-1",43123,44082,960,264,21,54.87,6.13,78]
["GL894465-1",21697,22575,879,597,18,44.96,5.19,36.88]
["GL894578-1",41830,42494,665,390,15,44.2,5.66,35.17]
["GL894692-1",19198,20501,1304,650,24,43.07,6.56,31.76]
["GL894828-2",39951,40918,968,685,20,49.2,5.19,49.29]
["GL895131-1",7460,8306,847,630,19,47.78,5.25,45.64]
["GL895198-1",5195,6142,948,716,18,40.72,4.24,26.69]
["GL895272-2",49527,50434,908,391,19,48.1,5.19,47.04]
["GL896236-1",2376,3115,740,348,17,49.51,6.13,49.9]
["JH118414-1",95386,96353,968,662,24,49.82,6.09,51.5]
["JH118585-1",120121,121598,1478,559,30,59.37,6.13,100]
["JH118585-1",148662,149663,1002,708,20,47.04,6.13,42.24]
["JH118601-1",51832,53083,1252,645,22,42.19,5.66,29.28]
["JH118684-1",50428,51196,769,504,17,47.34,6.13,43.11]
["JH118727-1",131358,132205,848,563,17,41.97,6.13,29.31]
["JH118775-1",111557,112434,878,642,19,50.15,4.72,53.65]
["JH118872-1",64957,65815,859,565,17,41.28,4.72,28]
["JH118911-1",23222,24235,1014,719,19,41.58,5.19,28.7]
["JH118911-1",37596,38477,882,263,20,55.18,6.13,80]
["JH118911-1",62884,63783,900,583,18,43.62,5.66,33.2]
["JH118924-1",254966,255839,874,552,21,61.33,6.6,100]
["JH118995-1",8073,9018,946,274,18,40.83,5.19,26.71]
["chr1",3873482,3874199,718,431,17,50.22,4.63,54.31]
["chr1",4987070,4987994,925,355,19,46.99,5.19,41.6]
["chr1",5471150,5471926,777,508,17,42.65,5.25,30.34]
["chr1",6692773,6693853,1081,451,25,40.31,5.25,25.99]
["chr1",10751607,10752546,940,292,21,49.83,5.99,51.61]
["chr1",12850559,12851275,717,280,15,40.46,6.6,26.35]
["chr1",13573441,13574956,1516,526,30,63.75,5.19,100]
["chr1",15802515,15803353,839,318,17,42.54,6.13,29.87]
["chr1",16136411,16137424,1014,725,21,51.21,7.07,60.43]
["chr1",17135581,17136440,860,388,18,45.88,7.5,38.56]
["chr1",20595467,20596180,714,270,15,40.66,5.66,26.57]
["chr1",21191948,21192831,884,366,18,40.14,4.79,25.81]
["chr1",21290724,21291673,950,366,20,50.39,5.19,55.37]
["chr1",22377944,22378846,903,611,18,43.43,6.13,32.66]
["chr1",23576452,23577561,1110,494,24,52.83,4.71,64.78]
["chr1",26242822,26243834,1013,459,21,51.28,4.72,60.92]
["chr1",26592097,26593441,1345,770,24,46.07,5.19,38.62]
["chr1",33030371,33031302,932,371,18,41.66,5.66,28.73]
["chr1",35355724,35356602,879,239,17,40.05,4.24,25.66]
["chr1",38309440,38310851,1412,694,30,70.24,8.02,100]
["chr1",38366529,38367427,899,293,19,48.35,5.16,47.5]
["chr1",38414948,38415834,887,330,18,44.45,5.66,35.68]
["chr1",39506975,39507831,857,572,19,40.89,5.51,26.95]
["chr1",40890188,40891290,1103,293,22,50.51,5.66,55.8]
["chr1",45529583,45530588,1006,575,19,42.04,6.6,29.29]
["chr1",46056815,46057675,861,282,17,41.15,4.72,27.73]
["chr1",46545516,46546719,1204,612,21,40.33,6.13,26.14]
["chr1",46588916,46589752,837,219,17,42.67,5.66,30.5]
["chr1",46965280,46966399,1120,738,25,64.54,7.07,100]
["chr1",50500391,50501107,717,448,15,40.46,6.13,26.35]
["chr1",53053216,53053879,664,406,15,40.55,5.25,26.46]
["chr1",55230703,55231619,917,665,20,44.56,4.56,35.64]
["chr1",56888037,56889005,969,295,19,44.22,5.19,35.28]
["chr1",57557838,57558788,951,620,18,40.54,5.66,26.54]
["chr1",58415949,58417207,1259,654,26,46.44,4.33,39.41]
["chr1",58972399,58973636,1238,596,22,42.91,5.66,31.08]
["chr1",59774446,59775631,1186,614,22,45.68,6.13,38.13]
["chr1",61354904,61355858,955,613,20,46.07,4.87,38.67]
["chr1",61592657,61593493,837,392,21,61.49,5.89,100]
["chr1",61720535,61721572,1038,351,20,41.03,6.2,27.3]
["chr1",61895022,61895863,842,275,17,42.35,6.13,29.64]
["chr1",61916192,61917051,860,262,22,68.26,5.66,100]
["chr1",62243262,62244360,1099,402,23,55.69,8.49,84.82]
["chr1",69679369,69680333,965,548,22,59.83,6.6,100]
["chr1",70191413,70192344,932,637,18,41.66,6.6,28.73]
["chr1",70439322,70440161,840,499,17,42.48,4.72,29.7]
["chr1",71074507,71075547,1041,366,20,41.53,4.48,28.47]
["chr1",71398265,71399518,1254,540,24,51.01,6.6,59.79]
["chr1",72175418,72176180,763,443,18,46.91,6.35,41.07]
["chr1",74392694,74393761,1068,671,23,55.63,4.58,83.33]
["chr1",77433623,77434642,1020,291,21,50.83,5.66,57.68]
["chr1",77435094,77435981,888,265,20,52.09,4.98,63.72]
["chr1",77575018,77575868,851,267,19,52.08,6.13,63.34]
["chr1",77784760,77785908,1149,675,21,43.2,6.6,31.83]
["chr1",79298473,79299272,800,516,16,40.06,4.72,25.67]
["chr1",79353523,79354616,1094,545,22,46.07,5.25,38.57]
["chr1",79623305,79624273,969,676,23,59.41,6.56,100]
["chr1",79826468,79827525,1058,455,23,57.16,5.56,98.93]
["chr1",83303282,83304159,878,263,20,49.94,4.76,52.08]
["chr1",83773340,83774524,1185,703,25,49.55,5.74,50.21]
["chr1",83816999,83817846,848,268,18,40.14,4.18,25.85]
["chr1",84962098,84963073,976,289,22,59.02,5.66,100]
["chr1",87410556,87411351,796,529,17,41.35,3.94,28.11]
["chr1",87640518,87641664,1147,325,22,47.88,4.72,45.77]
["chr1",88590352,88591543,1192,565,22,45.35,6.13,37.24]
["chr1",89493068,89494071,1004,709,21,51.87,6.13,62.36]
["chr1",95389073,95390667,1595,582,30,54.73,4.92,77.08]
["chr1",96409845,96410798,954,660,19,45.14,4.72,36.8]
["chr1",100520799,100521730,932,650,19,46.53,4.72,39.63]
["chr1",101309216,101310110,895,266,22,65.3,6.13,100]
["chr1",101808528,101809427,900,273,18,43.62,6.13,33.2]
["chr1",104680769,104681708,940,421,18,41.18,4.72,27.79]
["chr1",114042802,114043826,1025,339,20,43.14,4.98,32.02]
["chr1",114715233,114716336,1104,695,22,45.71,6.6,38.29]
["chr1",115711029,115712197,1169,732,25,51.32,4.98,61.08]
["chr1",117514553,117515482,930,638,20,47.02,4.38,41.92]
["chr1",118359698,118360502,805,295,17,40.75,4.81,26.67]
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["chr1",123540190,123541084,895,281,18,41,4.48,27.04]
["chr1",123584499,123585308,810,288,18,49.71,5.66,50.74]
["chr1",124306510,124307195,686,408,16,48.14,5.66,47.2]
["chr1",124610029,124611197,1169,536,22,45.47,7.41,37.52]
["chr1",124749263,124750174,912,591,20,53.01,6.13,66.34]
["chr1",125265819,125266660,842,273,17,42.35,4.72,29.64]
["chr1",127018554,127019583,1030,752,21,50.19,5.19,53.67]
["chr1",127911099,127911989,891,253,19,46.78,4.53,40.71]
["chr1",132427939,132428825,887,611,18,43.44,5.56,32.73]
["chr1",133187709,133188910,1202,631,26,56.27,6.42,89.42]
["chr1",133253978,133255312,1335,682,27,50.93,5.87,58.72]
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["chr1",141602808,141603700,893,284,18,44.06,6.13,34.94]
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["chr1",200611109,200612123,1015,381,21,49.99,6.02,51.97]
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["chrX",101260901,101261853,953,474,18,40.43,6.13,26.31]
["chrX",102849883,102850777,895,645,18,42.94,5.56,31.19]
["chrX",104667228,104668127,900,295,18,41.97,5.95,29.28]
["chrX",109003153,109004151,999,514,19,42.44,6.6,29.68]
["chrX",113703622,113704607,986,715,19,43.2,6.6,31.86]
["chrX",116267575,116268430,856,261,18,46.49,5.19,39.29]
["chrX",117479948,117480810,863,567,18,41.77,5.25,28.96]
["chrX",121525689,121526767,1079,582,21,47.17,4.72,42.43]
["chrX",122517321,122518242,922,602,18,42.26,4.72,29.31]
["chrX",126076636,126077720,1085,584,22,51.63,5.19,61.11]
["chrX",128754064,128754796,733,260,16,44.6,5.19,35.77]
["chrX",128959327,128960272,946,273,18,40.83,5.19,26.71]
["chrX",133118007,133118873,867,523,19,40.23,6.7,25.98]
["chrX",136127962,136128775,814,380,17,44.19,5.66,35.02]
["chrX",136146722,136147568,847,266,17,42.03,4.24,29.22]
["chrX",136622961,136623874,914,367,18,42.75,5.19,30.62]
["chrX",138689942,138690888,947,254,19,42.5,4.48,29.85]
["chrX",138731083,138732322,1240,511,26,53.85,4.71,71.94]
["chrX",139680015,139680705,691,424,16,42.28,5.66,29.36]
["chrX",140491224,140492093,870,295,20,56.08,6.6,88.26]
["chrX",140901542,140902340,799,271,19,44.97,4.73,36.85]

{"sheet":"H3K4me3 InOV-2","index":2,"n_rows":5336,"n_cols":9,"rows_kept":5336}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = In-5_vs_In-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = In-5_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = In-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 150 bps"]
["# total tags in treatment: 12263099"]
["# tags after filtering in treatment: 12199583"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.01"]
["# total tags in control: 19271120"]
["# tags after filtering in control: 19123479"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 298"]
["chr","start","end","length","summit","tags",{"$f":"-10*LOG10(pvalue)","v":{"$error":"#NAME?"}},"fold_enrichment","FDR(%)"]
["GL892228-1",1,1167,1167,512,23,59.51,7.89,10.37]
["GL892277-2",81472,82204,733,287,13,42.26,5.04,5.4]
["GL892316-1",8932,9827,896,292,15,43.93,5.67,5.77]
["GL892594-2",210434,211119,686,285,13,41.87,5.84,5.29]
["GL892628-1",150207,151072,866,596,15,40.16,5.04,4.95]
["GL892680-2",30943,31778,836,283,14,41.82,6.3,5.26]
["GL892730-2",101949,103854,1906,274,35,107.47,6.3,30.43]
["GL892730-2",175900,177016,1117,653,18,48.03,6.93,6.86]
["GL892755-1",89511,90304,794,287,14,44,5.64,5.82]
["GL892765-2",63099,64049,951,659,19,63.75,6.3,11.68]
["GL892786-2",60847,61550,704,434,14,50.2,8.19,7.36]
["GL892805-1",97880,98654,775,483,14,45.46,6.3,6.36]
["GL892933-2",141366,142364,999,395,16,43.71,6.93,5.78]
["GL893015-2",40984,41751,768,263,13,40.16,7.56,4.97]
["GL893070-1",12794,13531,738,477,14,47.86,6.3,6.87]
["GL893117-1",19136,20102,967,272,18,56.69,5.67,9.46]
["GL893124-1",106447,107262,816,296,14,42.97,6.3,5.55]
["GL893127-2",130826,132352,1527,965,31,91.01,8.82,22.3]
["GL893191-2",231425,232312,888,223,17,55.9,5.67,9.41]
["GL893220-1",28643,29775,1133,552,20,40.63,4.3,5.06]
["GL893226-1",112519,114580,2062,496,43,122.09,7.6,44.68]
["GL893245-2",10130,10993,864,578,14,40.27,6.93,5.01]
["GL893250-1",2483,3179,697,256,15,57.12,8.19,9.59]
["GL893311-1",149197,149684,488,244,48,518.94,30.24,100]
["GL893394-1",87390,88291,902,293,16,49.17,6.3,7.15]
["GL893397-2",40167,40846,680,327,13,45.7,6.93,6.36]
["GL893397-2",64621,65254,634,231,14,55.53,6.93,9.44]
["GL893407-2",122845,123589,745,290,14,41.52,7.56,5.2]
["GL893504-1",15355,16194,840,543,14,41.59,6.93,5.23]
["GL893511-2",226806,227848,1043,509,18,41.66,5.79,5.27]
["GL893529-2",13876,14738,863,390,16,51.59,6.93,7.93]
["GL893620-1",51266,52105,840,495,15,47.22,6.3,6.63]
["GL893644-1",17508,18484,977,296,17,50.35,6.93,7.41]
["GL893661-1",64417,65399,983,690,25,63,8.09,11.27]
["GL893669-1",124363,125255,893,234,16,45.92,7.05,6.47]
["GL893698-1",29082,30006,925,633,15,42.33,6.93,5.44]
["GL893763-1",19908,20896,989,297,18,50.79,7.6,7.67]
["GL893782-1",30915,31737,823,523,14,42.56,5.67,5.53]
["GL893785-2",65707,66522,816,254,15,48.72,5.67,7.12]
["GL893844-1",67267,68082,816,439,14,42.97,6.93,5.55]
["GL893871-1",38660,39383,724,451,17,57.32,7.89,9.64]
["GL893906-1",39824,40680,857,542,14,40.65,5.04,5.06]
["GL894004-1",39159,40031,873,385,16,41.35,5.26,5.19]
["GL894031-1",65082,65763,682,404,17,72.08,9.45,14.57]
["GL894168-1",90621,91359,739,394,16,47.56,6.51,6.78]
["GL894251-1",43022,44335,1314,276,31,113.14,8.19,34.35]
["GL894293-1",1950,2755,806,531,14,43.56,5.67,5.73]
["GL894341-1",34832,35526,695,264,13,44.69,5.67,6.03]
["GL894461-1",43960,44823,864,610,14,40.27,5.67,5.01]
["GL894470-1",12077,12826,750,514,14,47.06,6.93,6.6]
["GL894491-2",21280,22224,945,605,15,41.27,5.67,5.18]
["GL894514-1",10483,11427,945,589,15,40.98,6.89,5.12]
["GL894584-1",11151,12008,858,606,14,40.59,5.04,5.02]
["GL894649-2",42846,43966,1121,581,17,42.7,6.93,5.53]
["GL894703-1",1282,2244,963,271,16,45.64,5.67,6.33]
["GL894820-2",112329,113154,826,252,14,42.39,6.3,5.47]
["GL894895-1",20724,21517,794,294,17,62.62,8.19,11.14]
["GL894924-2",15986,16745,760,290,13,40.63,5.04,5.04]
["GL895004-1",4289,5052,764,316,13,40.4,5.67,5.02]
["GL895006-2",324,1032,709,394,13,43.77,5.67,5.76]
["GL895038-1",25581,26651,1071,535,17,45.19,7.56,6.23]
["GL895071-2",57048,58038,991,712,18,44.54,5.79,6.01]
["GL895144-1",57256,58349,1094,558,19,43.7,6.31,5.78]
["GL895176-2",151213,152100,888,605,17,51.54,6.43,7.88]
["GL895222-1",4294,5453,1160,452,20,51.54,6.43,7.89]
["GL895272-2",11465,12622,1158,551,21,56.93,6.43,9.53]
["GL895275-1",24146,24944,799,296,14,43.98,5.67,5.8]
["GL895286-1",4488,5286,799,540,15,49.82,6.3,7.32]
["GL895329-1",61321,62219,899,476,18,44.66,4.78,6.05]
["GL895360-2",22417,23212,796,514,14,44.16,5.67,5.88]
["GL895438-1",13884,14676,793,593,15,41.03,5.79,5.15]
["GL895440-1",7288,8419,1132,520,19,47.94,5.84,6.83]
["GL895513-2",18005,19233,1229,595,18,42.56,6.93,5.53]
["GL895582-1",39597,40359,763,531,13,40.45,6.3,5.03]
["GL895768-1",894,2121,1228,639,18,42.6,7.56,5.53]
["GL895783-1",56662,57546,885,597,15,44.55,5.04,6.02]
["GL895833-1",2246,3169,924,658,16,47.86,5.04,6.87]
["GL895853-2",47252,48239,988,650,25,97.78,10.4,25.22]
["GL895913-1",7034,8671,1638,989,28,57.49,5.79,9.69]
["GL895979-2",6998,7766,769,464,13,40.1,6.93,4.93]
["GL896048-1",11285,12322,1038,748,19,58.03,6.93,9.82]
["GL896137-1",27586,28491,906,521,17,54.72,5.67,9.15]
["GL896204-1",78336,79615,1280,567,21,50.22,5.84,7.38]
["GL896231-1",27068,27779,712,293,13,43.58,7.56,5.73]
["GL896265-2",52490,53203,714,466,13,43.45,6.3,5.69]
["GL896287-1",11419,12245,827,513,20,80.01,9.45,17.12]
["GL896324-1",17211,17968,758,287,14,46.54,7.56,6.52]
["GL896346-2",38771,39855,1085,601,17,44.48,6.93,6.05]
["GL896369-1",16485,17265,781,415,17,63.63,6.93,11.6]
["GL896487-1",904,2052,1149,467,18,46.39,5.67,6.51]
["GL896504-1",65371,66109,739,497,13,41.89,5.67,5.3]
["JH118436-1",5281,6418,1138,662,20,57.68,6.93,9.76]
["JH118443-1",56612,57372,761,381,15,52.39,7.56,8.33]
["JH118455-1",205504,206465,962,673,25,102.89,8.19,29.19]
["JH118458-1",161256,161974,719,431,15,55.43,6.93,9.47]
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["JH118545-1",81990,83267,1278,574,23,60.58,5.26,10.58]
["JH118751-1",30680,31580,901,650,16,49.23,7.56,7.14]
["JH118779-1",150548,151731,1184,569,18,44.67,8.82,6.05]
["JH118846-1",18335,19274,940,261,17,52.57,6.3,8.38]
["JH118919-1",71978,72660,683,279,13,45.5,5.67,6.35]
["JH118958-1",191496,192551,1056,437,16,40.83,5.67,5.15]
["JH118974-1",266412,267514,1103,681,20,42.23,4.78,5.39]
["JH118979-1",41881,42760,880,390,17,52.06,6.43,8.14]
["JH118983-1",8100,8895,796,615,15,40.6,4.68,5.04]
["chr1",3262383,3263280,898,606,15,42.93,4.95,5.55]
["chr1",4157269,4158064,796,517,15,40.08,7.51,4.94]
["chr1",4421412,4422655,1244,583,20,51.86,7.56,8]
["chr1",4722904,4723612,709,282,13,43.77,6.3,5.76]
["chr1",6524546,6525735,1190,294,25,83.91,7.56,20.05]
["chr1",6730507,6731447,941,615,20,51.51,5.69,7.85]
["chr1",7290105,7291080,976,581,17,50.41,6.3,7.45]
["chr1",9241417,9242314,898,600,16,49.41,8.19,7.24]
["chr1",10059725,10060568,844,546,14,41.37,6.3,5.18]
["chr1",10252747,10253574,828,536,17,47.3,6.07,6.69]
["chr1",10485151,10486011,861,590,14,40.43,6.3,5]
["chr1",10952041,10952878,838,297,15,47.34,5.04,6.72]
["chr1",11656498,11658295,1798,1250,40,97.11,8.13,24.89]
["chr1",14018091,14018963,873,577,16,49.35,5.5,7.21]
["chr1",14140565,14141323,759,284,13,40.69,6.93,5.09]
["chr1",14316680,14317896,1217,833,28,75,6.69,15.43]
["chr1",14386507,14387287,781,527,14,45.08,6.93,6.2]
["chr1",14415212,14416031,820,451,16,54.44,5.67,8.98]
["chr1",15623112,15623862,751,272,15,53.09,5.04,8.71]
["chr1",15714670,15715712,1043,626,19,40.95,5.26,5.11]
["chr1",16246864,16247877,1014,644,16,40.22,6.58,5]
["chr1",16363600,16364333,734,367,14,48.12,7.56,6.9]
["chr1",16465065,16466051,987,633,16,44.34,6.3,5.97]
["chr1",16540945,16541648,704,287,14,50.2,6.93,7.36]
["chr1",16618415,16619373,959,348,16,45.87,6.3,6.42]
["chr1",16763108,16764069,962,578,15,40.4,6.3,5.03]
["chr1",17139664,17140653,990,581,16,40.3,5.26,4.99]
["chr1",18926928,18927861,934,279,16,47.28,8.19,6.68]
["chr1",19580952,19581966,1015,279,19,42.51,4.78,5.51]
["chr1",20704909,20706041,1133,752,26,87.91,8.77,21.01]
["chr1",20961281,20962132,852,329,14,40.92,6.3,5.1]
["chr1",21023922,21024982,1061,663,21,55.71,7.36,9.4]
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["chr1",21741732,21742510,779,428,14,45.21,4.41,6.23]
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["chr1",22000211,22001554,1344,484,24,54.15,5.79,8.88]
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["chr1",26388715,26389440,726,262,14,48.67,6.3,7.1]
["chr1",26437446,26438168,723,297,14,40.17,5.79,4.98]
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["chr1",32520444,32521270,827,443,15,46.51,6.12,6.51]
["chr1",32878073,32879054,982,289,21,74.03,9.45,15.21]
["chr1",33211817,33212684,868,250,15,45.54,5.67,6.34]
["chr1",33660094,33660877,784,244,14,41.31,6.43,5.2]
["chr1",34030174,34031484,1311,701,20,48.53,7.56,7.05]
["chr1",34705469,34706382,914,278,19,64.43,7.34,11.75]
["chr1",34725729,34726844,1116,690,21,64.31,7.51,11.72]
["chr1",34745742,34746605,864,296,14,40.27,6.3,5.01]
["chr1",34857308,34858065,758,275,17,65.47,6.3,11.72]
["chr1",34899601,34900307,707,295,13,43.9,6.3,5.75]
["chr1",35132789,35134387,1599,217,32,42.36,3.51,5.45]
["chr1",35152144,35152940,797,530,14,41.6,5.98,5.24]
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["chr1",37521174,37522144,971,471,16,41.29,5.26,5.2]
["chr1",37532262,37533057,796,512,15,40.6,7.6,5.04]
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["chr1",37978714,37979449,736,454,14,44.33,5.26,5.96]
["chr1",38213095,38214825,1731,896,38,102.87,7.89,29.03]
["chr1",38702216,38702981,766,469,14,42.42,5.84,5.47]
["chr1",38802371,38803528,1158,533,21,56.93,6.43,9.53]
["chr1",38957627,38959302,1676,1196,28,71,6.3,14.29]
["chr1",40167918,40168733,816,236,14,42.97,5.67,5.55]
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{"sheet":"H3K4me3 InOV-3","index":3,"n_rows":15575,"n_cols":9,"rows_kept":4500,"cut":true,"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = In-7_vs_In-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = In-7_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = In-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 150 bps"]
["# total tags in treatment: 14810104"]
["# tags after filtering in treatment: 14702496"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.01"]
["# total tags in control: 19271120"]
["# tags after filtering in control: 19123479"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 306"]
["chr","start","end","length","summit","tags",{"$error":"#NAME?"},"fold_enrichment","FDR(%)"]
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["chrX",138261736,138262859,1124,303,24,67.28,6.62,0.41]
["chrX",139227117,139228884,1768,700,51,42.9,4.05,1.03]
["chrX",139663910,139664943,1034,320,19,46.67,8.14,0.83]
["chrX",139738026,139738675,650,241,14,44.94,6.62,0.97]
["chrX",141114991,141116049,1059,632,18,40.46,5.6,1.08]
["chrX",141946293,141947180,888,494,18,46.17,5.2,0.88]
["chrX",141981798,141983035,1238,609,24,59.8,7.13,0.54]
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["chrX",142785210,142786147,938,298,19,48.03,4.72,0.82]
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{"sheet":"H3K4me3 PreOV-1","index":4,"n_rows":16405,"n_cols":9,"rows_kept":4500,"cut":true,"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = Pre-2_vs_Pre-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = Pre-2_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = Pre-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 149 bps"]
["# total tags in treatment: 10194933"]
["# tags after filtering in treatment: 10120990"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.01"]
["# total tags in control: 14426599"]
["# tags after filtering in control: 14335453"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 258"]
["chr","start","end","length","summit","tags",{"$f":"-10*LOG10(pvalue)","v":{"$error":"#NAME?"}},"fold_enrichment","FDR(%)"]
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["GL892260-2",20349,21065,717,479,13,40.67,7.84,2.25]
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["GL892663-2",62795,63554,760,246,13,49.24,7.89,3.1]
["GL892708-2",36484,37258,775,234,14,42.64,6.18,2.36]
["GL892710-1",66328,66955,628,296,12,51.42,7.02,3.41]
["GL892730-2",185768,186440,673,224,16,74.86,8.45,6.71]
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{"sheet":"H3K4me3 PreOV-2","index":5,"n_rows":1733,"n_cols":9,"rows_kept":1733}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = Pre-3_vs_Pre-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = Pre-3_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = Pre-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 149 bps"]
["# total tags in treatment: 13286826"]
["# tags after filtering in treatment: 13190944"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.01"]
["# total tags in control: 14426599"]
["# tags after filtering in control: 14335453"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 340"]
["chr","start","end","length","summit","tags",{"$f":"-10*LOG10(pvalue)","v":{"$error":"#NAME?"}},"fold_enrichment","FDR(%)"]
["GL892311-1",7513,8629,1117,637,19,43.54,5.62,8.43]
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["GL892381-1",58392,59417,1026,296,17,43.27,4.6,8.39]
["GL892439-2",14464,15930,1467,715,25,60.17,5.62,4.42]
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["GL893009-1",96569,97640,1072,622,19,51.07,5.62,6.23]
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["GL895213-2",49062,49901,840,508,17,54.57,7.66,6.07]
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["GL895927-2",92865,93828,964,457,16,41.5,5.11,8.33]
["GL895935-2",22055,23014,960,471,16,41.71,5.11,8.24]
["GL896452-1",10870,11631,762,432,14,42.51,5.62,8.32]
["JH118513-1",48078,49129,1052,741,18,46.97,5.62,7.72]
["JH118724-1",98432,99220,789,379,14,40.86,4.6,8.49]
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{"sheet":"H3K4me3 PreOV-3","index":6,"n_rows":7739,"n_cols":9,"rows_kept":7739}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = Pre-4_vs_Pre-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = Pre-4_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = Pre-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 149 bps"]
["# total tags in treatment: 10978321"]
["# tags after filtering in treatment: 10920974"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.01"]
["# total tags in control: 14426599"]
["# tags after filtering in control: 14335453"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 307"]
["chr","start","end","length","summit","tags",{"$error":"#NAME?"},"fold_enrichment","FDR(%)"]
["GL892277-2",53475,54425,951,646,17,58.41,6.15,1.32]
["GL892381-1",60744,61422,679,273,12,44.55,7.51,1.8]
["GL892421-2",47846,49361,1516,639,40,96.25,8.55,1.11]
["GL892430-1",23360,24172,813,398,14,40.59,5.21,2.01]
["GL892439-2",45282,46255,974,275,17,54.76,7.24,1.34]
["GL892447-1",45424,47271,1848,620,32,69.54,6.95,1.17]
["GL892486-1",99798,101378,1581,687,27,59.48,5.88,1.27]
["GL892520-2",24528,25347,820,266,13,42.19,7.51,1.94]
["GL892547-1",21383,22288,906,289,17,61.33,6.15,1.21]
["GL892606-2",17705,18893,1189,826,24,87.07,8.88,1.2]
["GL892667-1",63144,64242,1099,521,18,55.63,6.15,1.35]
["GL892730-2",102833,103760,928,300,17,56.72,7.77,1.35]
["GL892750-2",28383,29912,1530,631,30,90.71,7.94,1.24]
["GL892775-1",2127,3092,966,392,23,97.84,8.2,1.15]
["GL892775-1",12646,13661,1016,302,19,66.72,10.25,1.27]
["GL892775-1",32915,34304,1390,305,32,122.28,9.91,1.9]
["GL892775-1",37872,39596,1725,1225,38,82.19,5.56,1.18]
["GL892798-1",35808,36664,857,406,13,40.21,5.46,2.03]
["GL892815-1",61341,62118,778,438,18,77.9,8.2,1.2]
["GL892933-2",141393,142530,1138,421,18,53.5,6.15,1.45]
["GL892953-2",173356,174385,1030,616,16,42.06,4.89,1.96]
["GL893011-1",20088,20884,797,268,13,43.49,6.15,1.78]
["GL893016-2",89791,90459,669,298,12,45.2,7.51,1.77]
["GL893044-1",37449,38107,659,305,14,59.28,7.51,1.3]
["GL893096-2",143047,143724,678,378,12,44.61,6.83,1.81]
["GL893103-2",8204,9191,988,461,15,44.58,6.83,1.8]
["GL893111-2",4351,5400,1050,664,16,41.07,6.11,2.01]
["GL893124-1",24197,24870,674,402,13,51.34,7.51,1.52]
["GL893127-2",130833,132148,1316,304,30,118.18,9.56,1.85]
["GL893128-1",56807,58138,1332,606,20,54.6,8.88,1.36]
["GL893166-1",14010,15157,1148,576,16,42.23,7.51,1.91]
["GL893210-2",69068,71047,1980,843,47,166.77,8.68,4.25]
["GL893219-2",14036,14981,946,595,16,52.64,8.88,1.48]
["GL893220-1",6625,7455,831,451,13,41.59,6.83,1.97]
["GL893220-1",28248,29529,1282,635,23,74.56,11.61,1.19]
["GL893226-1",98319,99155,837,257,15,53.22,6.83,1.44]
["GL893226-1",112608,113618,1011,541,16,48.98,7.51,1.73]
["GL893247-2",46036,46940,905,283,14,40.59,5.8,2.01]
["GL893304-1",44958,46283,1326,718,23,53.57,4.81,1.45]
["GL893304-1",58078,58904,827,273,17,66.93,6.83,1.27]
["GL893311-1",149184,149692,509,254,83,1141.07,56.69,100]
["GL893313-2",54142,55050,909,607,14,43.1,6.83,1.81]
["GL893333-2",36628,37364,737,385,13,47.11,6.15,1.71]
["GL893394-1",77342,78954,1613,733,29,74.13,6.32,1.22]
["GL893397-2",6370,7604,1235,648,19,49.8,5.74,1.61]
["GL893397-2",13698,14320,623,330,18,87.43,10.69,1.21]
["GL893407-2",113632,115395,1764,1117,35,108.26,7.55,1.5]
["GL893413-1",33742,34746,1005,270,22,84.45,7.89,1.18]
["GL893425-2",44401,45612,1212,481,21,66.75,8.2,1.27]
["GL893455-1",6081,7022,942,480,14,41.41,6.83,2]
["GL893573-1",21704,22714,1011,630,19,67.05,8.2,1.28]
["GL893631-2",166429,167147,719,417,12,42.07,6.15,1.95]
["GL893647-1",27729,28431,703,300,14,50.22,7.33,1.61]
["GL893661-1",64003,65585,1583,736,33,90.51,6.95,1.24]
["GL893689-1",37286,38559,1274,620,19,52.08,5.46,1.51]
["GL893691-1",7316,8630,1315,808,24,69.55,7.94,1.17]
["GL893739-1",11220,12311,1092,748,21,54.84,7.26,1.34]
["GL893754-1",25619,26543,925,633,15,47.96,6.83,1.71]
["GL893763-1",19342,20901,1560,723,27,81.85,10.25,1.17]
["GL893813-1",27356,28105,750,363,12,40.27,6.15,2.03]
["GL893828-2",120330,121673,1344,760,26,50.14,5.13,1.61]
["GL893835-2",61079,62144,1066,488,15,40.79,6.15,2]
["GL893852-2",73565,75249,1685,1240,28,74.94,7.51,1.2]
["GL893985-2",5671,6488,818,542,13,42.3,5.46,1.92]
["GL894004-1",99382,100541,1160,576,19,58.01,9.56,1.31]
["GL894185-1",15037,15775,739,440,12,40.9,6.83,2]
["GL894251-1",30680,31395,716,286,13,48.47,6.15,1.75]
["GL894266-1",1623,2298,676,290,12,44.74,7.51,1.8]
["GL894328-1",44563,45895,1333,620,20,54.56,8.88,1.35]
["GL894396-1",28678,29468,791,500,15,56.26,7.51,1.36]
["GL894396-1",29606,30583,978,332,18,62.91,8.88,1.23]
["GL894614-2",21751,22666,916,305,15,48.46,6.83,1.75]
["GL894621-1",36624,38227,1604,604,34,112.26,6.86,1.61]
["GL894639-2",7504,8363,860,256,15,51.77,5.46,1.51]
["GL894649-2",27269,28575,1307,305,33,140.73,12.98,2.42]
["GL894649-2",53888,54943,1056,784,16,46.63,6.15,1.71]
["GL894665-2",18449,19227,779,479,14,50.68,6.83,1.57]
["GL894696-2",6449,7280,832,535,15,47.4,6.15,1.73]
["GL894772-1",34342,35459,1118,693,22,45.29,4.28,1.72]
["GL894792-1",8866,9598,733,303,12,41.25,7.51,2.01]
["GL894997-1",6090,7010,921,553,14,42.48,7.51,1.85]
["GL895038-1",82184,82931,748,468,13,41.3,4.89,2.01]
["GL895066-1",22729,23678,950,279,14,41.01,6.15,2]
["GL895108-1",13807,14542,736,436,12,41.07,5.46,2.01]
["GL895110-2",216876,218082,1207,640,22,73.12,6.15,1.18]
["GL895144-1",57355,58381,1027,730,18,59.82,7.51,1.28]
["GL895172-1",28104,29121,1018,530,16,43.08,6.83,1.81]
["GL895175-1",32347,33379,1033,514,16,41.91,5.5,1.97]
["GL895213-2",52635,53882,1248,643,19,53.36,6.15,1.44]
["GL895275-1",6754,8059,1306,710,21,61.45,6.83,1.21]
["GL895275-1",24152,26366,2215,679,39,70.51,6.65,1.19]
["GL895333-2",6045,7700,1656,1051,43,88.99,5.34,1.25]
["GL895339-1",60363,61207,845,551,16,51.91,7.83,1.52]
["GL895351-2",14791,16328,1538,601,25,71.55,6.15,1.22]
["GL895358-1",189,900,712,278,12,42.49,6.83,1.85]
["GL895401-1",97706,98569,864,590,14,45.55,6.83,1.71]
["GL895413-1",52638,53603,966,734,14,40.22,5.46,2.03]
["GL895440-1",7205,7867,663,291,13,52.13,8.2,1.51]
["GL895440-1",7914,8757,844,279,14,41.32,6.72,2]
["GL895502-2",23141,23979,839,555,14,41.6,5.5,1.97]
["GL895611-1",43505,44664,1160,501,18,52.35,8.88,1.52]
["GL895674-1",4772,5617,846,268,13,40.79,5.46,2]
["GL895717-1",115602,116224,623,247,12,48.35,7.51,1.74]
["GL895833-1",2476,4509,2034,433,46,135.39,9.24,2.12]
["GL895853-2",47331,48179,849,537,16,46.62,6.72,1.71]
["GL895880-1",20646,21632,987,567,15,44.63,6.15,1.81]
["GL895941-1",5246,6226,981,376,16,50.63,6.83,1.62]
["GL895946-1",43785,44855,1071,380,18,53.98,5.83,1.38]
["GL895957-1",1699,2630,932,287,17,59.62,6.15,1.28]
["GL896053-2",2692,3355,664,373,17,48.97,5.68,1.73]
["GL896063-1",16732,17452,721,419,12,41.95,5.46,1.98]
["GL896063-1",28586,29516,931,297,16,47.4,7.33,1.73]
["GL896090-1",4643,5716,1074,409,18,57.04,6.83,1.33]
["GL896094-1",965,2072,1108,431,17,49.49,6.83,1.68]
["GL896133-1",69044,70185,1142,756,18,46.64,5.49,1.71]
["GL896152-2",11887,12742,856,313,13,40.26,5.46,2.02]
["GL896152-2",41109,42483,1375,778,33,121.35,12.22,1.86]
["GL896192-1",21212,21921,710,271,14,55.4,7.51,1.37]
["GL896201-1",23861,24858,998,258,20,70.66,9.72,1.2]
["GL896204-1",77332,78728,1397,769,21,40.9,4.81,2]
["GL896221-1",4761,5799,1039,420,18,59.1,8.2,1.35]
["GL896236-1",26188,27624,1437,725,21,51.34,8.42,1.52]
["GL896245-1",16648,17752,1105,326,20,67.22,8.88,1.28]
["GL896253-1",264,1179,916,343,19,73.77,8.88,1.21]
["GL896264-1",10451,11903,1453,708,22,51.6,7.94,1.51]
["GL896265-2",80072,80877,806,299,13,42.97,6.83,1.8]
["GL896267-1",13410,15086,1677,1085,27,68.16,5.66,1.24]
["GL896270-1",80,836,757,302,13,45.86,7.51,1.68]
["GL896274-2",47794,48542,749,274,13,46.35,6.83,1.69]
["GL896290-2",49382,50457,1076,567,15,40.33,5.46,2.04]
["GL896302-1",50487,51422,936,672,18,65.71,6.83,1.3]
["GL896304-2",11016,11931,916,295,14,42.74,5.46,1.85]
["GL896346-2",38631,39542,912,642,15,48.69,9.56,1.77]
["GL896349-1",13977,14946,970,302,22,71.09,9.09,1.21]
["GL896359-1",13271,14682,1412,700,23,67.05,9.56,1.28]
["GL896364-1",45638,46528,891,471,16,49.78,7.33,1.61]
["GL896394-2",14041,14997,957,452,15,40.66,5.46,1.99]
["GL896397-2",44595,45375,781,250,13,44.42,6.15,1.79]
["GL896405-1",47271,48437,1167,486,22,74,7.35,1.21]
["GL896426-1",63563,65110,1548,560,37,148.43,8.88,2.99]
["GL896452-1",33404,34467,1064,754,18,54.57,7.15,1.35]
["GL896456-1",60394,62055,1662,598,37,81.55,5.99,1.16]
["GL896465-1",4887,6057,1171,373,22,69.23,9.56,1.16]
["GL896509-1",61715,63231,1517,300,27,84.39,5.46,1.18]
["GL896522-1",83,2993,2911,1266,108,268.69,7.64,25]
["GL896533-1",2338,3291,954,570,18,64.49,8.2,1.25]
["JH118455-1",190557,192103,1547,713,24,47.34,6.41,1.72]
["JH118468-1",17784,18674,891,587,14,44.06,6.83,1.79]
["JH118479-1",27416,28342,927,647,14,42.17,5.46,1.94]
["JH118489-1",26824,27583,760,207,14,40.58,4.89,2.02]
["JH118501-1",306458,307530,1073,546,15,40.47,6.83,2.03]
["JH118518-1",168351,169321,971,368,18,48.35,7.48,1.74]
["JH118521-1",4284,5187,904,415,15,43.43,6.72,1.81]
["JH118531-1",84738,85505,768,547,16,58.1,6.11,1.31]
["JH118545-1",82261,83365,1105,737,23,86.57,10.93,1.19]
["JH118804-1",486,1780,1295,423,28,105.99,10.25,1.41]
["JH118811-1",221819,222673,855,292,13,40.31,6.15,2.03]
["JH118898-1",87812,88635,824,278,14,47.88,8.88,1.75]
["JH118901-1",124117,124766,650,255,12,46.47,7.51,1.7]
["JH118911-1",63888,64558,671,272,12,40.25,6.11,2.02]
["JH118914-1",23321,24327,1007,379,16,49.2,6.15,1.75]
["JH118919-1",57960,58748,789,423,13,43.95,6.15,1.79]
["JH118966-1",455330,456594,1265,733,17,42.15,8.2,1.94]
["JH118974-1",265193,266113,921,257,15,42.5,5.5,1.85]
["chr1",1034662,1035330,669,377,12,45.2,7.51,1.77]
["chr1",1035620,1036404,785,351,21,99.88,11.61,1.2]
["chr1",1913911,1914764,854,363,14,46.12,6.83,1.69]
["chr1",3373789,3375146,1358,658,20,49.96,8.42,1.62]
["chr1",3535525,3536114,590,295,13,50.46,7.94,1.63]
["chr1",3711437,3712099,663,305,14,40.85,5.7,2.01]
["chr1",3715311,3717446,2136,695,54,197.81,14,8.55]
["chr1",4311622,4312564,943,521,16,43.6,5.76,1.77]
["chr1",6524389,6525511,1123,476,17,42.55,5.5,1.86]
["chr1",6526095,6527035,941,400,16,43.62,6.38,1.78]
["chr1",9270136,9271194,1059,409,17,52.08,9.56,1.51]
["chr1",9387221,9388550,1330,673,29,64.84,5.99,1.26]
["chr1",9388614,9390347,1734,849,37,102.61,9.62,1.3]
["chr1",9410849,9412717,1869,1323,38,73.2,5.99,1.19]
["chr1",9445919,9446892,974,753,22,89.97,7.51,1.29]
["chr1",10042568,10043281,714,281,12,42.1,7.47,1.95]
["chr1",10076803,10078157,1355,414,39,131.14,11.4,1.95]
["chr1",10819022,10819961,940,478,14,41.51,6.15,1.99]
["chr1",10906921,10908681,1761,1035,30,71.88,8.11,1.19]
["chr1",10979166,10979974,809,510,13,42.81,6.15,1.83]
["chr1",11656547,11658236,1690,1006,33,102.77,8.3,1.31]
["chr1",11767042,11768206,1165,700,19,50.7,7.33,1.57]
["chr1",13254523,13255533,1011,729,15,43.42,5.46,1.8]
["chr1",14164585,14165393,809,291,14,41.99,5.34,1.96]
["chr1",14316752,14317927,1176,881,28,100.29,8.79,1.21]
["chr1",15335525,15336435,911,605,14,43,5.46,1.8]
["chr1",15590380,15591217,838,536,22,102.31,8.88,1.29]
["chr1",15695863,15697751,1889,1148,42,78.88,5.83,1.23]
["chr1",16771468,16772421,954,264,15,40.76,5.5,1.99]
["chr1",16938628,16939504,877,587,14,44.83,6.15,1.81]
["chr1",17339671,17340347,677,413,12,44.68,6.83,1.79]
["chr1",18570876,18571834,959,579,26,121.2,10.25,1.85]
["chr1",18652625,18653875,1251,757,28,109.47,14.34,1.52]
["chr1",18690136,18691330,1195,719,21,67.77,8.2,1.22]
["chr1",18705883,18707637,1755,920,35,118.78,8.88,1.88]
["chr1",18874030,18874927,898,291,14,43.69,6.15,1.78]
["chr1",19579425,19580364,940,297,19,71.99,8.88,1.19]
["chr1",19581130,19582342,1213,503,17,44.44,7.51,1.79]
["chr1",21039118,21040629,1512,681,28,42.37,4.66,1.91]
["chr1",21143157,21144011,855,553,13,40.31,6.83,2.03]
["chr1",21856234,21858323,2090,1526,40,100.73,6.66,1.22]
["chr1",21999134,22000109,976,494,15,45.2,7.51,1.77]
["chr1",22050693,22051540,848,290,17,48.97,5.7,1.73]
["chr1",23395526,23399179,3654,3022,79,96.32,4.93,1.11]
["chr1",23567328,23568995,1668,1147,31,87.76,6.11,1.22]
["chr1",23594068,23594724,657,351,12,41.15,6.11,2.02]
["chr1",23774859,23776487,1629,739,28,43.91,4.7,1.81]
["chr1",23937750,23939022,1273,717,39,125.4,8.12,2.03]
["chr1",24187706,24189255,1550,804,29,89.32,8.42,1.26]
["chr1",24579940,24580758,819,299,14,48.18,5.46,1.73]
["chr1",24698301,24698876,576,288,13,55.87,8.88,1.37]
["chr1",25491855,25494015,2161,570,31,76.98,6.11,1.17]
["chr1",26118052,26118856,805,528,13,43.03,7.51,1.8]
["chr1",26147954,26149334,1381,755,19,46.76,8.82,1.7]
["chr1",26395055,26396015,961,296,15,45.99,6.15,1.69]
["chr1",26625238,26626493,1256,735,18,44.6,5.83,1.8]
["chr1",26822304,26823541,1238,898,21,65.23,6.83,1.28]
["chr1",27036622,27037581,960,406,16,51.83,5.46,1.52]
["chr1",27071561,27072536,976,487,17,50.35,6.72,1.62]
["chr1",28085792,28087191,1400,807,20,43.18,6.58,1.81]
["chr1",28295055,28298706,3652,779,89,243.32,8.45,19.57]
["chr1",28453734,28454788,1055,632,22,64.83,5.34,1.26]
["chr1",28584297,28585599,1303,574,23,73.28,6.83,1.19]
["chr1",28641860,28642506,647,304,13,53.32,8.2,1.44]
["chr1",28670884,28671589,706,295,12,40.59,6.48,2.01]
["chr1",29074138,29075244,1107,610,18,53.84,6.68,1.39]
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["chrX",84920451,84921253,803,510,14,41.69,5.86,1.97]
["chrX",85623992,85625283,1292,681,23,47.18,4.75,1.71]
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["chrX",101142780,101143981,1202,714,22,73.44,8.2,1.2]
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["chrX",106643373,106644322,950,675,14,41.01,4.78,2]
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["chrX",107518036,107518921,886,645,14,44.33,5.46,1.78]
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["chrX",113431444,113432207,764,460,13,45.43,6.15,1.72]
["chrX",115316182,115317192,1011,637,15,43.42,6.15,1.8]
["chrX",115844935,115845875,941,709,15,45.94,6.68,1.69]
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["chrX",116672175,116673110,936,296,14,41.71,6.15,1.97]
["chrX",118096029,118097126,1098,653,18,48.97,7.33,1.73]
["chrX",118470073,118470996,924,282,14,42.32,6.83,1.91]
["chrX",118847390,118848402,1013,414,15,43.32,6.83,1.79]
["chrX",119626919,119627852,934,512,14,41.81,5.46,1.99]
["chrX",119708481,119709356,876,576,14,44.88,5.46,1.81]
["chrX",120449071,120450022,952,648,14,40.91,6.15,2]
["chrX",121775666,121776578,913,292,14,41.84,6.01,1.98]
["chrX",122507252,122508237,986,707,16,50.35,8.88,1.62]
["chrX",124106122,124107068,947,526,14,41.16,5.46,2.02]
["chrX",124222463,124223482,1020,723,15,42.98,6.15,1.8]
["chrX",124425156,124426023,868,273,14,45.33,6.15,1.73]
["chrX",126486711,126487449,739,451,16,66.88,9.56,1.27]
["chrX",126803056,126804559,1504,698,27,45.93,7.27,1.69]
["chrX",127489933,127490886,954,430,15,46.37,7.51,1.69]
["chrX",129371447,129372547,1101,556,19,54.22,7.33,1.36]
["chrX",129671910,129672764,855,565,13,40.31,6.15,2.03]
["chrX",130846483,130847228,746,279,15,53.4,6.11,1.45]
["chrX",132319391,132320250,860,271,13,40.05,4.78,2.04]
["chrX",132718629,132719881,1253,418,21,64.37,7.51,1.25]
["chrX",133186904,133187726,823,524,13,42.03,6.83,1.97]
["chrX",133939042,133939917,876,258,16,56.61,6.79,1.37]
["chrX",136454758,136455689,932,504,14,41.91,5.46,1.97]
["chrX",137792828,137793761,934,245,16,53,5.43,1.43]
["chrX",138371079,138372005,927,283,14,42.17,6.83,1.94]
["chrX",142047923,142048992,1070,401,21,62.75,6.27,1.22]
["chrX",142258059,142259334,1276,664,27,100.66,8.2,1.22]
["chrX",142456166,142461489,5324,3063,109,54.94,3.52,1.35]
["chrX",142489464,142491628,2165,1541,38,40.54,3.92,2.02]
["chrX",142565064,142566327,1264,858,19,44.74,4.8,1.8]
["chrX",143809111,143810519,1409,671,25,42.53,6.41,1.86]

{"sheet":"H3K27me3 InOV-1","index":7,"n_rows":3547,"n_cols":9,"rows_kept":3547}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = In-3_vs_In-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = In-3_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = In-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 149 bps"]
["# total tags in treatment: 10165472"]
["# tags after filtering in treatment: 10125136"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.00"]
["# total tags in control: 19271120"]
["# tags after filtering in control: 19123479"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 231"]
["chr","start","end","length","summit","tags",{"$error":"#NAME?"},"fold_enrichment","FDR(%)"]
["GL892381-1",54632,55370,739,183,14,48.59,6.61,25.07]
["GL892391-1",2847,3657,811,381,12,40.17,6.85,11.5]
["GL892447-1",20254,20826,573,350,11,44.85,8.09,18.1]
["GL892477-1",7185,7874,690,493,11,40.79,5.87,12.02]
["GL892486-1",124294,124973,680,482,12,47.03,7.7,21.8]
["GL892541-1",19983,20625,643,274,11,43.65,6.85,15.84]
["GL892649-1",27920,28544,625,469,13,41.5,5.45,13.08]
["GL892761-1",51,621,571,222,11,48.58,9.79,24.93]
["GL892765-2",52807,53428,622,180,11,45.01,5.87,18.34]
["GL892775-1",30736,31437,702,188,12,42.66,7.19,14.41]
["GL892775-1",42476,43361,886,427,15,50.24,8.18,30.36]
["GL892813-1",6497,7105,609,277,12,52.8,6.85,36.6]
["GL892872-1",14333,14971,639,252,12,50.61,7.83,30.45]
["GL892880-1",172593,173019,427,213,10,49.96,9.79,28.96]
["GL892916-1",34072,34895,824,490,16,58.16,10.77,57.06]
["GL892921-1",16230,16974,745,525,13,43.8,6.85,16.01]
["GL892972-1",71902,72428,527,206,11,51.99,9.79,34.42]
["GL892977-1",16723,17381,659,198,11,40.08,5.51,11.5]
["GL893020-2",25332,26238,907,330,16,59.31,7.83,63.55]
["GL893069-1",20286,21002,717,501,14,40.75,4.77,11.99]
["GL893084-1",32,737,706,278,12,45.39,6.73,18.97]
["GL893095-2",52611,53068,458,229,10,49.96,9.79,28.96]
["GL893114-2",6523,7184,662,227,11,42.46,9.79,14.11]
["GL893223-2",7305,8081,777,224,12,41.99,7.83,13.56]
["GL893226-1",22757,23578,822,312,13,45.55,7.83,19.43]
["GL893226-1",53355,53904,550,196,11,50.17,8.81,30.05]
["GL893311-1",149252,149626,375,187,255,3100,249.67,0]
["GL893313-2",118946,119626,681,213,13,54.5,6.85,42.59]
["GL893437-2",82907,83680,774,472,12,42.16,7.83,13.81]
["GL893511-2",193374,194119,746,394,13,50.11,7.83,29.88]
["GL893549-2",28076,28610,535,307,10,44.22,8.81,16.79]
["GL893564-1",43586,44203,618,226,11,45.28,6.85,18.96]
["GL893574-2",149941,150531,591,203,12,47.14,6.85,22.07]
["GL893661-1",55655,56303,649,457,12,49.91,7.83,28.54]
["GL893669-1",89070,90074,1005,508,21,86.38,16.64,100]
["GL893707-2",69725,70308,584,388,11,47.64,6.85,23.24]
["GL893719-2",47339,47818,480,240,177,2675.4,170.36,0]
["GL893827-1",24295,24975,681,203,14,61.54,9.79,75.69]
["GL893841-1",67006,67677,672,143,11,41.85,5.87,13.3]
["GL893844-1",10491,11273,783,341,13,47.82,8.81,23.52]
["GL893852-2",58182,58711,530,208,10,41.72,6.36,13.13]
["GL893922-1",10934,11481,548,331,10,43.3,6.85,15.35]
["GL894031-1",199227,199887,661,437,12,49.09,7.83,25.9]
["GL894042-1",1667,2307,641,424,11,43.78,7.83,15.94]
["GL894099-1",27400,28032,633,364,11,41.24,7.27,12.76]
["GL894133-2",338909,339270,362,181,31,363.68,30.35,38.1]
["GL894168-1",59656,61030,1375,437,23,42.3,4.37,13.89]
["GL894216-2",15134,15794,661,451,11,42.52,6.85,14.2]
["GL894227-1",12052,12559,508,287,11,53.58,9.79,39.83]
["GL894319-1",8522,9170,649,442,11,43.27,6.85,15.27]
["GL894396-1",16065,16714,650,190,11,43.21,6.85,15.21]
["GL894525-1",1334,1999,666,309,11,42.22,8.81,13.78]
["GL894584-1",51378,51921,544,193,10,43.58,7.83,15.77]
["GL894588-1",38870,39551,682,485,11,41.26,7.83,12.77]
["GL894589-1",27511,28075,565,189,12,53.58,7.39,40.03]
["GL894589-1",35234,35818,585,227,11,47.56,7.83,23.05]
["GL894608-1",6449,7098,650,164,12,49.84,10.77,28.14]
["GL894639-2",16305,17240,936,481,16,55.18,7.52,44.29]
["GL894743-1",17773,18439,667,219,11,42.16,6.85,13.82]
["GL894803-2",17827,18417,591,218,10,40.43,5.87,11.75]
["GL894855-1",32137,32929,793,400,15,60.27,9.79,69.26]
["GL894860-1",9144,9849,706,197,13,52.75,9.79,36.59]
["GL894880-2",2589,3129,541,221,10,43.79,7.83,15.95]
["GL894929-1",28089,28948,860,567,95,959.44,78.33,11.11]
["GL895000-1",17427,18231,805,217,13,46.52,7.83,20.81]
["GL895033-1",90015,90684,670,422,11,41.97,5.87,13.49]
["GL895144-1",775,1512,738,219,13,44.22,7.83,16.75]
["GL895144-1",8616,9253,638,219,12,42.72,5.72,14.52]
["GL895164-1",1431,2393,963,374,15,49.8,7.83,27.98]
["GL895238-2",51139,51746,608,390,12,52.88,7.83,36.91]
["GL895304-1",5110,5907,798,351,15,46.69,5.35,21.17]
["GL895308-2",304426,305072,647,385,11,43.39,8.81,15.46]
["GL895419-1",1014,1591,578,213,10,41.27,6.85,12.82]
["GL895440-1",6498,7071,574,324,10,41.53,6.85,13.09]
["GL895478-1",51206,51887,682,252,13,51.91,6.51,33.85]
["GL895640-1",12901,13471,571,388,10,41.73,7.83,13.11]
["GL895741-1",21100,21693,594,174,10,40.24,8.81,11.56]
["GL895858-2",361,1242,882,441,17,67.63,7.83,100]
["GL895859-2",32330,33051,722,351,12,44.92,8.76,18.18]
["GL895946-1",64502,65016,515,333,10,45.69,7.83,19.74]
["GL896049-1",95460,96124,665,364,13,55.67,9.79,46.04]
["GL896294-1",61004,61775,772,306,12,42.27,8.81,13.82]
["GL896308-1",81401,82242,842,506,13,44.44,8.81,17.19]
["GL896324-1",25018,25687,670,222,11,41.97,9.79,13.49]
["GL896432-1",37886,38585,700,479,12,46.28,7.79,20.61]
["GL896553-1",6866,7544,679,204,12,47.89,6.85,23.57]
["JH118414-1",111056,111756,701,390,12,43.2,6.36,15.18]
["JH118428-1",116934,117606,673,217,11,41.79,6.85,13.2]
["JH118455-1",205987,206425,439,219,10,49.96,9.79,28.96]
["JH118475-1",1256,2082,827,437,15,57.96,6.85,55.53]
["JH118531-1",38223,39014,792,221,17,68.99,10.78,100]
["JH118531-1",59714,60307,594,202,12,50.53,8.18,30.35]
["JH118531-1",115842,116437,596,409,10,40.11,7.83,11.48]
["JH118583-1",56388,57053,666,438,12,45.43,6.36,19.29]
["JH118598-1",41104,41786,683,465,11,41.2,5.87,12.65]
["JH118611-1",47303,48372,1070,550,17,51.53,8.18,32.49]
["JH118620-1",32416,33267,852,567,15,52.31,8.18,35.16]
["JH118763-1",30798,31326,529,326,10,44.65,7.83,17.75]
["JH118779-1",36073,36801,729,514,12,44.75,6.85,17.85]
["JH118808-1",81954,82648,695,333,11,40.5,7.83,11.84]
["JH118872-1",50898,51603,706,176,13,52.75,7.83,36.59]
["JH118901-1",133644,134292,649,228,12,46.08,7.19,20.23]
["JH118915-1",41654,42120,467,242,10,49.54,8.81,27.04]
["JH118919-1",72034,72824,791,566,14,44.76,5.72,17.87]
["JH118938-1",32278,32931,654,375,13,56.49,7.83,49.65]
["JH118940-1",119240,120122,883,491,14,42.27,7.83,13.84]
["JH118940-1",124296,124879,584,374,10,40.88,8.81,12.1]
["JH118958-1",138517,139110,594,214,11,46.93,8.81,21.57]
["JH118991-1",7852,8496,645,427,11,40.49,7.27,11.82]
["JH118999-1",58629,59093,465,240,55,582,50.91,6.67]
["chr1",323207,323936,730,421,14,57.89,6.85,54.91]
["chr1",1060035,1060854,820,315,14,51.91,9.79,34.13]
["chr1",1693499,1694075,577,185,10,41.33,6.85,12.9]
["chr1",1872312,1872877,566,275,10,42.06,6.85,13.69]
["chr1",2824569,2825435,867,522,15,41.12,6.69,12.53]
["chr1",3538803,3539418,616,407,12,48.89,6.36,25.49]
["chr1",4237985,4238592,608,395,12,52.88,7.83,36.91]
["chr1",6407016,6407708,693,446,11,40.61,6.85,11.84]
["chr1",8189960,8190748,789,357,12,41.33,8.81,12.94]
["chr1",10135582,10136288,707,390,13,52.68,9.79,36.31]
["chr1",10767948,10768641,694,302,11,40.56,4.9,11.81]
["chr1",11307349,11308297,949,395,15,41.37,5.72,12.88]
["chr1",11374574,11375253,680,480,11,41.38,7.83,12.86]
["chr1",14164472,14165154,683,456,11,41.2,6.85,12.65]
["chr1",14203162,14204272,1111,593,19,48.21,8.18,24.35]
["chr1",15696245,15697130,886,484,16,44.3,7.29,16.93]
["chr1",16054049,16054698,650,473,11,43.21,6.85,15.21]
["chr1",16416225,16417163,939,575,14,45.19,7.83,18.83]
["chr1",17121103,17122178,1076,597,16,40.18,8.18,11.55]
["chr1",17159135,17160578,1444,304,28,96.06,8.81,100]
["chr1",17345284,17345851,568,349,10,41.93,6.85,13.4]
["chr1",17378349,17378920,572,372,10,41.66,6.85,13.11]
["chr1",17539983,17540518,536,364,11,43.72,6.54,15.94]
["chr1",18898357,18899247,891,473,14,42.02,7.83,13.63]
["chr1",18931146,18932146,1001,208,19,54.66,5.95,43.19]
["chr1",20035476,20036163,688,388,11,40.9,8.81,12.14]
["chr1",20641506,20642257,752,229,13,46.2,7.27,20.45]
["chr1",20722613,20723347,735,508,12,44.39,7.83,17.01]
["chr1",21209993,21210773,781,219,15,45.38,7.36,18.99]
["chr1",22162290,22162770,481,256,10,48.37,7.83,24.64]
["chr1",22187857,22188444,588,373,10,40.62,7.83,11.86]
["chr1",23283945,23284611,667,211,13,46.88,7.36,21.39]
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[{"$nulls":5},55554]

{"sheet":"H3K27me3 InOV-2","index":8,"n_rows":6987,"n_cols":9,"rows_kept":6987}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = In-5_vs_In-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = In-5_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = In-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 149 bps"]
["# total tags in treatment: 5138143"]
["# tags after filtering in treatment: 5119000"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.00"]
["# total tags in control: 19271120"]
["# tags after filtering in control: 19123479"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 191"]
["chr","start","end","length","summit","tags",{"$f":"-10*LOG10(pvalue)","v":{"$error":"#NAME?"}},"fold_enrichment","FDR(%)"]
["GL892362-2",19266,19732,467,162,7,46.28,13.04,3.93]
["GL892375-1",44015,44834,820,423,15,89.13,16.4,37.31]
["GL892391-1",72552,73108,557,152,7,43.21,14.05,3.12]
["GL892407-1",27595,27937,343,171,7,54.82,16.4,8.21]
["GL892407-1",85722,86260,539,394,7,44.2,9.37,3.3]
["GL892430-1",71418,72067,650,389,8,46.63,14.05,4.03]
["GL892449-1",61562,62072,511,351,7,45.81,14.05,3.7]
["GL892449-1",89753,90268,516,409,7,41.05,8.07,2.78]
["GL892459-1",7786,8269,484,302,7,47.47,11.71,4.32]
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["GL892826-1",14332,14795,464,204,8,58.2,14.05,10.79]
["GL892914-2",94861,95338,478,134,7,47.85,9.37,4.53]
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["GL892972-1",42224,42604,381,160,7,54.82,14.05,8.21]
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{"sheet":"H3K27me3 InOV-3","index":9,"n_rows":1194,"n_cols":9,"rows_kept":1194}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = In-7_vs_In-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = In-7_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = In-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 150 bps"]
["# total tags in treatment: 14497943"]
["# tags after filtering in treatment: 14384392"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.01"]
["# total tags in control: 19271120"]
["# tags after filtering in control: 19123479"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 242"]
["chr","start","end","length","summit","tags",{"$f":"-10*LOG10(pvalue)","v":{"$error":"#NAME?"}},"fold_enrichment","FDR(%)"]
["GL892345-2",55020,55531,512,272,13,42.89,6.59,11.54]
["GL892628-1",229369,230350,982,392,19,46.58,6.71,10.82]
["GL892793-2",150271,151074,804,516,18,57.91,7.89,13.51]
["GL892805-1",72413,73059,647,392,14,46.23,5.26,11.21]
["GL892841-1",132335,133153,819,420,17,51.02,6.58,11.52]
["GL892933-2",148967,149809,843,419,16,40.1,6.71,12.15]
["GL892963-1",34244,34857,614,220,13,42.82,7.24,11.45]
["GL893124-1",59781,60409,629,402,14,41.73,7.24,12.16]
["GL893219-2",13770,14481,712,481,17,42.29,5.87,11.85]
["GL893311-1",149250,149627,378,189,86,1279.53,56.58,0]
["GL893581-2",63808,64518,711,189,14,41.19,5.21,12.04]
["GL893620-1",65454,66183,730,449,14,40.44,6.58,12.33]
["GL893664-2",32747,33360,614,237,14,45.13,6.1,12.02]
["GL893719-2",47329,47818,490,260,37,274.66,23.68,20]
["GL894044-2",90316,90876,561,329,13,46.99,7.24,10.8]
["GL894215-1",14953,15525,573,332,12,40.01,5.92,12.31]
["GL894282-1",64509,65103,595,371,14,50.38,7.89,10.88]
["GL894352-2",12007,13063,1057,465,27,92.36,10.53,40]
["GL894691-2",61381,62112,732,270,14,40.31,6.58,12.21]
["GL894828-2",7687,8277,591,375,13,44.57,5.92,11.73]
["GL894828-2",11238,11694,457,228,12,45.25,7.53,11.94]
["GL894929-1",28418,28910,493,264,13,53.14,7.89,13.21]
["GL895950-1",56821,57521,701,467,16,54,7.24,14.29]
["GL896227-2",34431,35170,740,232,17,49.69,5.23,10.57]
["GL896252-1",10039,10639,601,394,13,43.8,7.24,11.53]
["GL896254-1",4999,5764,766,205,18,56.28,5.49,10.42]
["JH118484-1",70843,71664,822,599,17,50.81,6.58,11.21]
["JH118584-1",121472,122173,702,461,15,47.98,5.92,10.98]
["JH118598-1",13540,14364,825,461,16,45.11,5.92,11.93]
["JH118647-1",32768,33486,719,479,14,41.16,5.26,12.05]
["JH118694-1",29730,30508,779,494,16,42.68,5.92,11.57]
["JH118791-1",51224,51752,529,239,13,49.76,7.89,10.69]
["JH118811-1",211088,211610,523,252,12,41.18,6.17,12.12]
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{"sheet":"H3K27me3 PreOV-1","index":10,"n_rows":1782,"n_cols":9,"rows_kept":1782}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = Pre-2_vs_Pre-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = Pre-2_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = Pre-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 150 bps"]
["# total tags in treatment: 11919817"]
["# tags after filtering in treatment: 11875059"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.00"]
["# total tags in control: 14426599"]
["# tags after filtering in control: 14335453"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 251"]
["chr","start","end","length","summit","tags",{"$f":"-10*LOG10(pvalue)","v":{"$error":"#NAME?"}},"fold_enrichment","FDR(%)"]
["GL892381-1",21486,22260,775,533,14,46.77,6.15,37.61]
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["GL892669-1",723,1301,579,223,11,41.43,7.68,24.53]
["GL892793-2",58066,58916,851,180,14,42.25,6.15,26.05]
["GL892811-1",3234,3912,679,433,16,66.94,11.52,100]
["GL892972-1",84299,85032,734,437,13,43.42,6.15,28.09]
["GL893245-2",38169,38975,807,234,17,63.27,8.45,100]
["GL893311-1",149242,149646,405,202,76,1096.6,58.39,0]
["GL893407-2",116745,117479,735,244,13,43.36,5.38,27.83]
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["GL894090-2",39656,40309,654,457,12,42.54,6.15,26.77]
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["GL894277-1",11365,11948,584,231,11,41.08,6.15,24.07]
["GL894341-1",29873,30757,885,373,14,40.4,6.91,22.86]
["GL894650-2",147061,147910,850,392,14,42.31,6.91,26.15]
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["GL894933-1",17191,18001,811,314,17,62.97,9.22,100]
["GL895158-1",25139,26130,992,428,15,40.21,7.68,22.61]
["GL895308-2",383314,383996,683,232,13,46.75,7.68,37.46]
["GL895351-2",56469,57113,645,400,12,43.14,4.61,27]
["GL895476-1",5942,6638,697,337,13,45.8,6.91,34.48]
["GL895681-1",32289,32844,556,334,11,43.07,6.91,26.69]
["GL895910-1",4262,4934,673,426,12,41.32,7.68,24.17]
["GL895945-1",5045,5510,466,233,12,49.27,8.24,46.17]
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["GL896028-1",22103,22970,868,480,15,46.92,6.91,38.63]
["GL896048-1",85,815,731,518,13,43.61,5.38,28.57]
["GL896290-2",41210,42041,832,596,15,43.33,6.15,27.73]
["GL896426-1",57534,58135,602,204,12,46.16,8.45,36.19]
["GL896524-1",14957,15635,679,368,13,47.02,8.45,38.87]
["JH118403-1",66215,66817,603,297,12,46.08,6.15,35.51]
["JH118465-1",161650,162356,707,506,13,45.14,6.15,32.71]
["JH118621-1",9299,10028,730,414,13,43.67,6.91,28.87]
["JH118631-1",107781,108488,708,232,13,45.08,7.68,32.58]
["JH118681-1",39810,40606,797,386,14,45.41,5.38,34.09]
["JH118738-1",122025,123093,1069,550,18,52.23,6.91,61.17]
["JH118993-1",8930,9771,842,517,16,54.47,7.68,68.9]
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{"sheet":"H3K27me3 PreOV-2","index":11,"n_rows":566,"n_cols":9,"rows_kept":566}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = Pre-3_vs_Pre-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = Pre-3_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = Pre-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 150 bps"]
["# total tags in treatment: 15435507"]
["# tags after filtering in treatment: 15348546"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.01"]
["# total tags in control: 14426599"]
["# tags after filtering in control: 14335453"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 267"]
["chr","start","end","length","summit","tags",{"$f":"-10*LOG10(pvalue)","v":{"$error":"#NAME?"}},"fold_enrichment","FDR(%)"]
["GL892405-1",19181,19856,676,263,17,50.12,8.97,100]
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["GL893311-1",149240,149653,414,207,73,895.81,43.68,0]
["GL893461-2",43561,44166,606,255,14,43.57,7.18,100]
["GL893703-1",62953,63724,772,243,18,48.86,6.58,100]
["GL893719-2",47302,47781,480,240,25,143.73,14.96,75]
["GL893914-1",42923,44168,1246,487,25,56.11,6.58,87.04]
["GL894444-1",58457,59003,547,276,13,42.13,6.58,100]
["GL894453-1",3804,4700,897,583,19,40.02,6.42,100]
["GL894858-2",152584,153224,641,280,14,41.03,5.98,100]
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["GL896193-2",9333,9973,641,398,14,41.03,7.18,100]
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["JH118940-1",109646,110458,813,249,17,40.74,5.98,100]
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{"sheet":"H3K27me3 PreOV-3","index":12,"n_rows":795,"n_cols":9,"rows_kept":795}
["# This file is generated by MACS version 1.4.2 20120305"]
["# ARGUMENTS LIST:"]
["# name = Pre-4_vs_Pre-input_0.0001_10_30"]
["# format = BAM"]
["# ChIP-seq file = Pre-4_sequence_bowtie2_susScr3_alignment.bam"]
["# control file = Pre-input_sequence_bowtie2_susScr3_alignment.bam"]
["# effective genome size = 2.29e+09"]
["# band width = 300"]
["# model fold = 10,30"]
["# pvalue cutoff = 1.00e-04"]
["# Large dataset will be scaled towards smaller dataset."]
["# Range for calculating regional lambda is: 1000 bps and 10000 bps"]
[]
["# tag size is determined as 149 bps"]
["# total tags in treatment: 15184132"]
["# tags after filtering in treatment: 15095060"]
["# maximum duplicate tags at the same position in treatment = 4"]
["# Redundant rate in treatment: 0.01"]
["# total tags in control: 14426599"]
["# tags after filtering in control: 14335453"]
["# maximum duplicate tags at the same position in control = 4"]
["# Redundant rate in control: 0.01"]
["# d = 240"]
["chr","start","end","length","summit","tags",{"$error":"#NAME?"},"fold_enrichment","FDR(%)"]
["GL892269-1",37233,38051,819,335,17,45.68,7.99,100]
["GL892477-1",34588,35238,651,219,15,46.09,6.66,100]
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["GL893038-1",72436,73050,615,211,14,40.52,6.94,100]
["GL893153-2",9880,10841,962,494,18,42.25,8.65,100]
["GL893285-2",47771,48494,724,423,19,64.74,7.99,60.29]
["GL893311-1",149268,149633,366,183,105,1606.29,69.89,100]
["GL893332-1",29811,30442,632,304,14,41.67,7.32,100]
["GL893719-2",47332,48179,848,235,46,247.77,29.95,66.67]
["GL893886-1",103670,104547,878,251,18,42.71,6.74,100]
["GL894284-2",28250,28950,701,406,16,48.23,8.65,100]
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["JH118469-1",9461,10349,889,475,19,51.99,6.66,100]
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["chr1",200439070,200439800,731,233,18,46.67,6.03,100]
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["chr1",213343134,213343857,724,503,15,40.99,5.32,100]
["chr1",220577654,220578368,715,231,17,51.85,7.81,100]
["chr1",223568184,223568680,497,234,13,42.07,7.25,100]
["chr1",224762444,224763237,794,354,16,41.9,7.32,100]
["chr1",225110986,225111543,558,380,13,41.28,6.66,100]
["chr1",228919482,228920209,728,507,15,40.73,5.99,100]
["chr1",229046396,229046934,539,300,17,69.49,9.98,69.39]
["chr1",239368625,239369175,551,236,14,47.99,7.99,100]
["chr1",241075147,241075841,695,281,15,42.93,5.99,100]
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