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{"sheet":"aagenecounts","index":0,"n_rows":31313,"n_cols":35,"rows_kept":2250,"cut":true,"bounds":{"rows_first":1000,"rows_last":250,"rows_between":1000,"halvings":1}}
["Table S16. Raw FPKM values used for Differential gene expression analysis and coexpression analysis",{"$nulls":11},"*See Table S17 for sample description"]
["RAP_ID","MSU_ID","R498_ID","ANR1","ANR2","ANS1","ANS2","AYR1","AYR2","AYS1","AYS2","BNR1","BNR2","BNS1","BNS2","BYR1","BYR2","BYS1","BYS2","CNR1","CNR2","CNS1","CNS2","CYR1","CYR2","CYS1","CYS2","DNR1","DNR2","DNS1","DNS2","DYR1","DYR2","DYS1","DYS2"]
["Os05g0375400","LOC_Os05g31140","OsR498G0510710800.01",139.1881478,65.52887857,723.5042186,588.9804159,139.5245245,316.2128072,836.852023,151.7414249,126.3145585,134.8696887,164.8408093,282.8940005,205.8712697,56.31935326,85.95202819,259.3718359,23.81977868,241.8903084,153.7638525,267.469557,40.71534183,24.85000648,243.7800073,50.31357723,9.303808269,22.62761226,62.09685127,27.28655298,83.63265076,82.837358,186.7539484,277.9979421]
["Os02g0601500","LOC_Os02g38940","OsR498G0204251600.01",0,0,0,0,0,0,0,0,0,0.075198403,0,0,0,0,0,0.157178217,0,0,0,0.033830193,0,0,0,0,0.037302575,0,0,0,0,0,0,0]
["Os05g0127200","LOC_Os05g03610","OsR498G0509653300.01",56.17270851,42.75272122,8.393315805,9.266954888,53.82073043,45.73367863,14.29791673,36.0081907,37.01097959,37.29370055,7.285398274,11.51067704,88.87161954,45.71892509,16.19950256,7.088694073,89.99080086,90.61073666,8.002643509,13.51208715,46.33203676,42.60491965,13.264722129999999,16.44786923,182.7159516,216.2656806,8.14606989,8.175090233,113.6283906,113.2464331,12.55161426,11.77180191]
["NA","NA","OsR498G0509844600.01",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.079258094,0.168506466,0,0,0,0,0.079417771,0,0,0,0,0,0,0,0,0]
["NA","NA","OsR498G0510193000.01",0.261467796,0.860990341,0.982382981,0.979926826,0,0,0.24298745,0,0,0,0,0,0,0,0,0,2.028511854,0.308050883,3.377833599,1.827887622,0,0,0.290371227,0.261748232,0,0,0,0,0,0,0,0]
["Os04g0136700","LOC_Os04g05010","OsR498G0407526200.01",0.107994074,0.197563856,0.912945954,0.742022034,0.215515474,0.197031112,0.066907423,0.180055021,0.446482364,0.63930197,0.56351083,0.693154594,0.531038786,0.386109678,0.301263925,0.066812818,0.99742439,1.611634366,2.28947201,0.790923716,0.63059101,0.33384816,0.239864124,0.900915858,0.277488054,0.602053276,2.345611088,2.274980592,0.213069879,0,0.662756065,0.551294484]
["Os02g0305800","LOC_Os02g20280","OsR498G0203512500.01",0.544595645,0.326055514,0.372026691,0.278322412,0.345802442,0.270980236,0.23004729,0.544792006,0.334938972,0.109905358,0.21527945,0.259992897,0.389518221,0.05310232,0.184148176,0.321610813,0.109741977,1.108254063,0.393593719,0.840550183,0.379427357,0.286966904,0.824723011,0.247808977,3.107591426,3.799123515,5.865379606,9.28387414,8.439512413,4.739273645,2.110841358,4.043758244]
["Os01g0844800","LOC_Os01g62650","OsR498G0102321100.01",30.96464516,33.11734193,23.58559396,24.18177233,32.20898348,28.82384706,11.10502873,30.2763224,19.19267351,17.0631299,19.9674375,16.85286284,35.82038925,37.96963492,17.09938205,19.39905765,34.08709584,33.03851206,23.20017384,21.19984846,38.24312693,34.90396044,23.77111735,21.06224407,36.50031688,37.526950479999996,34.24861205,29.82030035,38.37279185,34.96607721,29.36747533,25.7536583]
["Os03g0115500","LOC_Os03g02450","OsR498G0305119300.01",6.444723712,7.133164909,2.482190516,5.937309867,7.910469684,5.962712985,3.458208131,5.15224293,4.013407769,4.339920699,2.368529881,2.454530859,3.951381696,2.111355089,2.432226901,1.351298472,6.24617278,4.066498577,6.886780161,6.409388642,6.435940459,6.970944014,3.533652058,4.130126803,5.166818796,4.403741545,2.955036035,3.771458745,3.734785376,4.761045017,1.620016849,2.285063181]
["NA","NA","OsR498G0102206400.01",134.5768167,131.1967443,5.011422087,7.871390467,77.74866022,70.08510498,6.4752604,69.38382908,74.11968711,139.5638899,18.87127071,15.96054744,97.97091606,130.9355926,18.659931190000002,13.96678584,121.6169391,54.03937062,14.95622687,11.61100064,302.6563829,311.2801604,8.843392907,8.410107716,130.9214884,91.77685497,7.114846348,7.13623009,160.8656153,141.4027211,8.950823121,10.8537179]
["Os02g0747900","LOC_Os02g51320","OsR498G0204774000.01",2.036696513,3.383540988,0,1.908278556,8.458509742,5.121883008,6.343251332,6.828146694,2.668861301,0.610987021,0.095742703,0.28907105,4.872181044,6.258387899,6.091124937,3.422555675,0.854110254,0.843086626,0.492315828,0.054974064,4.941827359,1.659121811,1.711661969,0.936783147,1.030483629,1.353854323,0,0,2.411013849,6.030448563,1.813530868,0.618202843]
["Os10g0213700","LOC_Os10g15300","OsR498G1018399800.01",0.204072426,0.373329145,22.42708464,29.50934117,0.067875276,0.5957159,12.01108697,0.204146007,1.073801635,1.05705722,21.59270384,23.16015321,0.735888591,0.437770345,20.43109038,11.0472007,0.075391846,0,12.84379505,13.58708569,0.074475288,0,18.73484599,22.13155785,0.29963369,0.06692223,18.87134228,27.69649503,0.402630307,0.217056164,14.83088371,11.52882051]
["Os02g0493300","LOC_Os02g29160","OsR498G0203853000.01",0.431710955,0.210605336,0.382976494,0.831453065,0.287177458,0.761385663,0.111443876,0.359888845,0.243386243,0.186348539,0.479732887,0.608761693,0.141523359,0.051449668,0.133812833,0.445145188,0.13290823,0.254312277,0.357510266,0.646721911,0.026258486,0.139017956,0.452798375,0.192077327,0.475401611,0.18876344,0.686676147,1.242395182,0.397486136,0.051019754,0.185922517,0.857042435]
["Os07g0600700","LOC_Os07g40940","OsR498G0714708100.01",11.02610752,17.22135605,0.742421686,10.7381995,21.49131846,14.62247384,7.602457552,12.33471661,3.832211099,5.000693771,1.409136188,2.732586169,14.41943495,8.689682279,22.49030746,15.4768151,4.467653638,7.077271562,3.063298487,5.328255417,17.95623324,11.27024757,13.12274176,30.34442665,7.180745653,6.726225989,1.209520166,0.900761657,6.877153847,11.76965814,12.9053373,9.36094562]
["NA","NA","OsR498G0713754200.01",0,0.101080627,0,0,0,0.201616112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Os11g0173550","LOC_Os11g07240","OsR498G1119495500.01",0.034533482,0.056857853,0.016218587,0.129424298,0.017228954,0.018901511,0.080231705,0,0.253096818,0.114992369,0.540584977,0.317364561,0.033962268,0.074080241,0.144503658,0.240354779,0,0,0.137270451,0.258663343,0.037808504,0,0.11505275,0.034570521,0.114085174,0.135896321,0.238655702,0.21466479,0.143080947,0.165287757,0.15058244,0.105773128]
["Os07g0469600","LOC_Os07g28644","OsR498G0714264300.01",1.165161529,0.937878072,0.072962131,1.382814513,0.930089328,1.02038075,0.360936266,0.932465314,57.28033896,42.4196782,42.5585202,48.8144136,51.41220784,41.99111733,38.64333593,36.1867615,15.66850535,12.81230197,9.494600217,10.16247336,18.7096938,17.10916473,8.367620715,12.36395894,64.15399722,44.55236513,50.53749275,53.59673044,59.95368181,70.88754937,49.8280976,46.94942762]
["Os10g0182000","LOC_Os10g10244","OsR498G1018282900.01",22.06769551,26.05582889,34.82468867,31.13058092,29.36354318,27.55698729,26.80225209,30.61348588,20.40905,21.80003869,45.64640016,42.83249745,30.10909457,25.12521836,41.65941138,35.50818423,23.30076718,32.50293734,36.62307121,39.54232475,23.58900215,19.09207182,37.05778674,47.61858215,26.62909301,34.06104413,48.93298795,52.01214349,27.15849073,26.08122301,46.62383061,37.61299974]
["Os05g0152400","LOC_Os05g06050","OsR498G0509750100.01",11.59258044,10.55198093,2.010836336,4.65499033,11.84933804,11.18677429,4.842320939,9.859266586,11.9325281,13.58464329,3.653277417,3.712071006,18.47172638,11.69752554,4.694984739,3.148680762,21.3987016,14.8000391,4.254815967,4.033958891,11.67484893,11.1911947,3.90258929,4.164865666,13.87779268,10.88820066,4.625829382,3.38963106,10.80637529,10.18202982,3.366031004,2.350643639]
["NA","NA","OsR498G0916766100.01",2.834779204,1.768242849,15.72985764,8.342541218,2.566901115,2.009540894,11.6285815,2.610936016,1.309511397,1.399981007,3.464456842,2.164149834,1.301833847,0.455411837,3.077267183,3.731645466,0,0,0,0,0.013672329,0,0,0,0.742599616,1.216286558,4.117875836,4.10130279,0.916554841,0.823517566,2.274954261,2.282233781]
["Os06g0237200","LOC_Os06g13020","OsR498G0611964000.01",2.66840588,1.853003851,0.421999942,0.790866095,3.776497059,2.101362913,0.26569339,2.369745067,1.412266307,1.344909971,1.811500006,2.132934913,3.896234783,2.394813415,1.645754762,1.137075888,1.523977292,1.924780969,0.595285341,0.84298676,2.727696388,2.825069768,1.315377608,1.594583373,4.407686808,4.125284126,3.642491174,3.385136999,4.367556116,3.779410994,3.284858027,3.433258376]
["Os01g0588100","LOC_Os01g40560","OsR498G0101428100.01",10.68235723,6.289461235,0,0,19.39852625,15.23321739,0,10.39960558,3.230409532,1.998879691,0,0,11.99497001,18.30605072,0,0,1.678377383,3.568309875,0,0,28.27515996,11.19744459,0,0,5.047916848,9.66373836,0.040407315,0,14.68055936,12.31971958,0,0]
["Os12g0605400","LOC_Os12g41220","OsR498G1222069000.01",80.6244192,93.59301124,93.22548981,96.60136308,111.1951119,110.89976,82.96773652,94.95787126,87.63527319,81.99335733,91.91264956,96.88967146,109.7513647,71.59221296,89.98466966,82.4586946,95.7311396,144.2233178,99.0494108,103.2838844,88.73267655,59.39403134,86.60701157,87.73612098,80.24250967,88.86982742,87.77615438,94.24312895,91.25713834,91.64678338,75.8749792,78.81362232]
["NA","NA","OsR498G1018100400.01",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.177705629,4.451832111,3.304409722,2.037799878,0.496437858,1.576947937,3.273139404,3.933991496,0,0,0,0,0,0,0,0]
["Os01g0249300","LOC_Os01g14690","OsR498G0100553200.01",10.87614454,12.59477151,9.413099822,14.03429678,15.75615207,15.04022364,9.432274609,11.73508108,24.83984071,19.59045958,37.4255116,37.89006791,19.73236285,15.40133891,29.90333585,25.12377678,15.22753006,20.01375454,21.29780345,21.19042579,12.72638945,10.97340083,15.37685674,19.72212292,19.64767852,18.83529946,34.72325412,34.99921054,19.17342853,20.54534393,25.4880541,22.71023536]
["Os05g0477900","LOC_Os05g40010","OsR498G0511045900.01",9.555959853,5.684348859,8.165153703,13.11245244,6.459225622,5.466555606,17.99027926,3.6387414,29.40464488,30.79374585,13.35036246,9.550907507,2.667789798,6.877141721,19.77824097,13.15896033,3.758085119,1.743243732,19.66637628,18.28657259,9.517236299,13.15045472,19.85527884,20.86050754,6.585396559,4.97351924,11.1993764,13.86026528,10.87432408,12.72131907,32.19977395,21.46400272]
["Os05g0239000","LOC_Os05g14930","OsR498G0510116300.01",0.389808893,0.106967186,0,0,0.388955825,0.533393709,0,0.682411526,0.879052254,0.21633617,0.084750612,0.085294398,0.287520834,0.627155187,0.090618674,0.180872637,0.108007287,0,0.193686094,0,0.42677686,0.112972329,0.216449766,0.292670236,0.214629457,0.479368053,0.384844375,0.100962697,0.115362627,0,0,0]
["NA","NA","OsR498G1119930100.01",0.954510857,1.550605811,0.645529364,1.645561606,3.238234736,2.800282199,0.425782442,2.100681039,1.54980236,0.55092389,0.664082371,0.96909782,1.126466891,1.47426441,0.852075457,0.602338896,0.423157623,0.539791899,0.303534139,0.495698338,1.379443526,0.929480938,0.381609122,0.917313231,0.756799696,0.638553246,1.055436952,0.435113682,0.542369795,1.096459072,0.554949625,0.66267945]
["NA","NA","OsR498G1119662800.01",0,0.083889446,0,0.023869466,0,0.027887744,0.047350317,0,0,0.056554171,0.044310672,0.111487457,0.225489371,0.08197483,0.07106806,0.236416822,0,0.030014527,0.379747746,0.279867961,0.027891789,0.029533001,0.0848758,0.10201236,0.701350064,0.300757059,0.226361812,0,0.150789341,0.108386462,0.098743538,0.208080296]
["Os05g0148900","LOC_Os05g05620","OsR498G0509736900.01",303.1436073,224.4271513,0.925937296,2.133885927,124.9536955,129.5302198,1.990156064,211.6105467,148.0986218,161.1453977,3.576987381,3.361925956,168.9221331,122.7597737,1.770088268,2.113522483,495.2253199,465.2422933,5.708793639,4.039811994,132.7868025,218.1510746,0.339749503,0.680575787,227.8514663,277.2316491,1.073901191,0.563469119,145.6675789,154.201209,0.395260696,0.867630224]
["Os01g0527700","LOC_Os01g34390","OsR498G0101155400.01",18.79212391,20.25189919,17.14322775,18.64766927,29.94477679,24.52973165,13.46837974,27.82806811,21.44575536,17.09765644,17.72948195,18.46625781,21.19747462,16.827343,17.20961834,18.49613962,30.16832019,33.84755873,15.95834058,19.08040983,16.49061017,16.93283304,18.02362579,18.86928627,23.01418351,23.83794556,27.7167463,25.36877949,21.67286322,22.16821935,23.61713085,24.21534444]
["Os01g0167700","LOC_Os01g07330","OsR498G0100223800.01",0.241663132,0.719987207,0.048641421,0.129386153,1.240119104,0.661357893,0.17645773,0.794322304,0.214095728,0.268236448,0.390307416,0.271946594,0.152785164,0.296233632,0.337075827,0.320378588,0.286968963,0.406739745,0.274459988,0.327543671,0.32127757,0.180096471,0.115018841,0.13824133,0.399180427,0.373604739,0.511254353,0.250368444,0.367813999,0.146879149,0.117085157,0.123365613]
["NA","NA","OsR498G1120493100.01",0.660099025,0.856285475,0.901859786,1.79920991,0.538899093,0.525523965,0.613443727,0.600306392,0.270650822,0.333038007,1.043752415,1.313061807,0.531147606,0.514918398,0.613811529,0.835331364,1.529697464,1.484704254,1.311945458,2.277368185,0.985500358,1.18262119,2.265847607,1.021247201,0.594739105,0.118073852,1.481118527,1.927290985,0.213113541,0.191480899,1.104819793,0.367604969]
["Os08g0293300","LOC_Os08g19694","OsR498G0815678600.01",3.894292463,4.858265355,0.096684441,0.739394114,3.423585985,3.662043098,0.207258188,5.028366093,2.824154916,2.837241897,0.238711741,0.2552586,3.94797939,5.833026986,0.350954922,0.827860523,2.49077964,3.213690755,0.698977598,0.565392305,0.957904039,2.207526952,0.495349158,0.120217114,7.141050207,6.227825059,0.440361614,0.124414196,4.995870809,4.890185099,0.465459799,0.770671149]
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