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["Table. S1 Assembly Accession of all genomes used in the manuscript."]
["NCBI/RefSeq Assembly Accession","Organism Name","Organism Infraspecific Names Strain","Assembly Stats Total Sequence Length","Assembly Level","Assembly Release Date","Assembly Stats Contig N50"]
["GCF_900094595.1","Cupriavidus alkaliphilus","ASC-732",6125055,"Scaffold","2016-08-04",411922]
["GCF_014191245.1","Cupriavidus alkaliphilus","ASC-869",6161449,"Scaffold","2020-08-14",647389]
["GCF_003096375.1","Cupriavidus alkaliphilus","CAG-122",6054765,"Scaffold","2018-05-07",279447]
["GCF_003254285.1","Cupriavidus alkaliphilus","MLR2-44",6334135,"Scaffold","2018-06-19",396288]
["GCF_003268995.1","Cupriavidus alkaliphilus","MtRBr-3211",5951939,"Scaffold","2018-06-27",332144]
["GCF_014191185.1","Cupriavidus alkaliphilus","SLV-2362",6573315,"Scaffold","2020-08-14",1060241]
["GCF_014191175.1","Cupriavidus alkaliphilus","SrRBr-232",6033565,"Scaffold","2020-08-14",711348]
["GCF_000832305.1","Cupriavidus basilensis","4G11",8421483,"Complete Genome","2015-02-03",4522716]
["GCA_008801925.2","Cupriavidus basilensis","DSM 11853",8942610,"Complete Genome","2020-10-29",4566734]
["GCF_013337645.1","Cupriavidus basilensis","UME74",8137772,"Contig","2020-06-12",104464]
["GCF_000243095.1","Cupriavidus basilensis ","OR16",8546215,"Contig","2012-01-19",83115]
["GCF_013004615.1","Cupriavidus gilardii","ATCC 700815",5761323,"Contig","2020-05-10",91469]
["GCA_008801915.1","Cupriavidus gilardii","CCUG 38401",5792089,"Contig","2019-10-01",184543]
["GCF_013347325.1","Cupriavidus gilardii","FDAARGOS_639",5760010,"Complete Genome","2020-06-16",3485840]
["GCF_001658125.1","Cupriavidus gilardii","JZ4",5559922,"Contig","2016-06-03",476017]
["GCA_017598945.1","Cupriavidus gilardii","Marseille CSURQ4897",5335421,"Contig","2021-03-28",148253]
["GCF_013314895.1","Cupriavidus gilardii","USM5",5535898,"Contig","2020-06-09",194803]
["GCA_008354965.1","Cupriavidus gilardii","W2-2",5595578,"Contig","2019-09-09",475905]
["GCF_001281465.1","Cupriavidus gilardii ","CR3",5578743,"Complete Genome","2015-09-14",3539530]
["GCA_003260185.2","Cupriavidus metallidurans","BS1",7164523,"Complete Genome","2019-03-21",3938349]
["GCA_009730455.1","Cupriavidus metallidurans","FDAARGOS_675",6941396,"Complete Genome","2019-12-05",3928086]
["GCF_000709025.1","Cupriavidus metallidurans","NA1",6514625,"Contig","2014-06-16",73380]
["GCA_000709045.1","Cupriavidus metallidurans","NA4",7291874,"Contig","2014-06-16",226033]
["GCF_001543455.1","Cupriavidus metallidurans","NDB3NO24",6541533,"Contig","2016-02-01",588091]
["GCF_000709065.1","Cupriavidus metallidurans","NE12",7132977,"Contig","2014-06-16",197312]
["GCA_002944765.1","Cupriavidus metallidurans","Ni-2",6953108,"Complete Genome","2018-02-10",6543877]
["GCF_018672515.1","Cupriavidus metallidurans","YL2",6274362,"Complete Genome","2021-06-03",3622028]
["GCA_020149505.1","Cupriavidus metallidurans","ZM02",6258398,"Complete Genome","2021-09-25",3524836]
["GCA_900185755.1","Cupriavidus metallidurans","NDB4MOL1",6901105,"Contig","2017-07-22",365306]
["GCA_900185655.1","Cupriavidus metallidurans","NDB2Meth2",6349144,"Contig","2017-07-22",588091]
["GCF_000196015.1","Cupriavidus metallidurans ","CH34",6913352,"Complete Genome","2010-02-04",3928089]
["GCA_000496715.1","Cupriavidus metallidurans ","H1130",7223157,"Contig","2013-11-13",158293]
["GCF_001598775.1","Cupriavidus metallidurans ","NBRC 101272",6638611,"Contig","2016-03-11",292142]
["GCF_016757775.1","Cupriavidus necator","C39.",8377134,"Complete Genome","2021-01-27",3114252]
["GCF_003326035.1","Cupriavidus necator","CR12",8196961,"Contig","2018-07-18",86897]
["GCA_016127575.1","Cupriavidus necator","FDAARGOS_1030",7415967,"Complete Genome","2020-12-20",4049936]
["GCF_002011925.2","Cupriavidus necator","NH9",8246935,"Complete Genome","2018-03-06",4347557]
["GCA_001481455.1","Cupriavidus necator","PHE3-6",7267813,"Contig","2015-12-23",125732]
["GCA_013141915.1","Cupriavidus necator","SHC 2-3",6967782,"Scaffold","2020-05-22",326676]
["GCF_000744095.1","Cupriavidus necator ","A5-1",9741376,"Contig","2014-08-28",4300546]
["GCF_004798725.1","Cupriavidus necator ","H16",7414561,"Complete Genome","2019-04-17",4049965]
["GCF_009663695.2","Cupriavidus necator ","H850",8324331,"Scaffold","2022-05-19",172306]
["GCF_000219215.1","Cupriavidus necator ","N-1",8480857,"Complete Genome","2011-06-24",2684606]
["GCA_001598755.1","Cupriavidus necator","NBRC 102504",6914926,"Contig","2016-03-11",110333]
["GCA_016894385.1","Cupriavidus oxalaticus","Ox1",6694750,"Complete Genome","2021-02-16",3885446]
["GCF_016894365.1","Cupriavidus oxalaticus","Ox1_mCherry",6697997,"Complete Genome","2021-02-16",3888701]
["GCF_008807855.1","Cupriavidus oxalaticus","T2",7296847,"Complete Genome","2019-10-03",3852567]
["GCA_004768545.1","Cupriavidus oxalaticus","X32",7968737,"Complete Genome","2019-04-10",2410412]
["GCF_900249725.1","Cupriavidus oxalaticus","LMG 2235",8527238,"Chromosome","2018-08-08",236387]
["GCF_001592245.1","Cupriavidus oxalaticus ","NBRC 13593",6644955,"Contig","2016-03-04",243729]
["GCA_008801835.1","Cupriavidus pauculus","CCUG 12507",6415608,"Contig","2019-10-01",148461]
["GCA_019931045.1","Cupriavidus pauculus","FDAARGOS_1472",6483357,"Complete Genome","2021-09-12",3829687]
["GCF_019795205.1","Cupriavidus pauculus","HI2903",6310729,"Contig","2021-08-29",351853]
["GCA_000974605.1","Cupriavidus pauculus","KF709",6826799,"Contig","2015-02-06",57279]
["GCF_020667815.1","Cupriavidus pauculus","MF1",6758723,"Contig","2021-10-28",3676674]
["GCF_013314905.1","Cupriavidus taiwanensis","USM6",6358134,"Contig","2020-06-09",76088]
["GCF_900250105.1","Cupriavidus taiwanensis","STM 6041",6845487,"Chromosome","2018-08-06",2497465]
["GCF_900250115.1","Cupriavidus taiwanensis","STM 3679",7009602,"Chromosome","2018-08-06",1974358]
["GCF_900250085.1","Cupriavidus taiwanensis","SWF 66322",6952027,"Chromosome","2018-08-07",2067548]
["GCF_900249795.1","Cupriavidus taiwanensis","STM 6044",6820352,"Chromosome","2018-08-08",1173671]
["GCF_900249805.1","Cupriavidus taiwanensis","STM 6032",6537164,"Chromosome","2018-08-08",930266]
["GCF_900250075.1","Cupriavidus taiwanensis","SWF 65033",6767478,"Chromosome","2018-08-07",846037]
["GCF_900249745.1","Cupriavidus taiwanensis","LMG 19430",6786979,"Chromosome","2018-08-08",741802]
["GCF_900249815.1","Cupriavidus taiwanensis","STM 6021",6811355,"Chromosome","2018-08-08",539874]
["GCF_900249835.1","Cupriavidus taiwanensis","STM 6043",6817480,"Chromosome","2018-08-08",539719]
["GCF_900250055.1","Cupriavidus taiwanensis","STM 6083",7338369,"Chromosome","2018-08-08",505483]
["GCF_900250065.1","Cupriavidus taiwanensis","LMG 19425",7696780,"Chromosome","2018-08-07",450119]
["GCF_900249825.1","Cupriavidus taiwanensis","STM 6162",6869008,"Chromosome","2018-08-08",421087]
["GCF_900250025.1","Cupriavidus taiwanensis","SWF 66324",6700309,"Chromosome","2018-08-08",366890]
["GCF_900250035.1","Cupriavidus taiwanensis","LMG 19431",6520096,"Chromosome","2018-08-08",350523]
["GCF_900249705.1","Cupriavidus taiwanensis","LMG 19426",6586675,"Chromosome","2018-08-08",345393]
["GCF_900249845.1","Cupriavidus taiwanensis","STM 6116",6524022,"Chromosome","2018-08-08",315424]
["GCF_900249855.1","Cupriavidus taiwanensis","STM 6117",6528362,"Chromosome","2018-08-08",315424]
["GCF_900249895.1","Cupriavidus taiwanensis","STM 6119",6517050,"Chromosome","2018-08-08",315424]
["GCF_900249775.1","Cupriavidus taiwanensis","STM 6132",6882219,"Chromosome","2018-08-08",286816]
["GCF_900249965.1","Cupriavidus taiwanensis","mpp 1.1",6594617,"Chromosome","2018-08-08",277402]
["GCF_900249735.1","Cupriavidus taiwanensis","STM 3521",6953301,"Chromosome","2018-08-08",261507]
["GCF_900249755.1","Cupriavidus taiwanensis","Cupriavidus sp. LMG 19464",5954828,"Chromosome","2018-08-08",246233]
["GCF_900250005.1","Cupriavidus taiwanensis","mpp 1.3",6603990,"Chromosome","2018-08-08",232845]
["GCF_900249925.1","Cupriavidus taiwanensis","STM 8556",6603947,"Chromosome","2018-08-08",224988]
["GCF_900249945.1","Cupriavidus taiwanensis","STM 8564",6737786,"Chromosome","2018-08-08",217522]
["GCF_900249955.1","Cupriavidus taiwanensis","STM 8565",6736035,"Chromosome","2018-08-08",208335]
["GCF_900249935.1","Cupriavidus taiwanensis","STM 8561",6725445,"Chromosome","2018-08-08",185876]
["GCF_900249715.1","Cupriavidus taiwanensis","STM 3511",6668242,"Chromosome","2018-08-08",184747]
["GCF_900249995.1","Cupriavidus taiwanensis","TPUD 27.6",6795041,"Chromosome","2018-08-08",184747]
["GCF_900249985.1","Cupriavidus taiwanensis","TPIG 6a",6813618,"Chromosome","2018-08-08",184281]
["GCF_900249765.1","Cupriavidus taiwanensis","STM 3711",6764138,"Chromosome","2018-08-08",181545]
["GCF_900249915.1","Cupriavidus taiwanensis","STM 8558",6605446,"Chromosome","2018-08-08",178891]
["GCF_900249905.1","Cupriavidus taiwanensis","STM 8557",6605824,"Chromosome","2018-08-08",173292]
["GCF_900250045.1","Cupriavidus taiwanensis","ip2.30/pp 2.30",6705804,"Chromosome","2018-08-08",148488]
["GCF_900249865.1","Cupriavidus taiwanensis","STM 6150",6669855,"Chromosome","2018-08-08",147001]
["GCF_900249885.1","Cupriavidus taiwanensis","STM 8560",6744384,"Chromosome","2018-08-08",145894]
["GCF_900250015.1","Cupriavidus taiwanensis","MAPUD 10.1",6760360,"Scaffold","2018-08-08",530537]
["GCF_900249975.1","Cupriavidus taiwanensis","cmp 52",7026539,"Scaffold","2018-08-08",192653]
["GCF_900249785.1","Cupriavidus taiwanensis","STM 3681",6749459,"Scaffold","2018-08-08",183931]
["GCF_000069785.1","Cupriavidus taiwanensis ","LMG 19424",6476522,"Chromosome","2008-03-27",3416911]
["GCF_000472465.1","Cupriavidus taiwanensis ","STM 6018",6553639,"Contig","2013-09-30",370421]