{"text_format":"3","workbook":"xls","n_sheets":3,"sheets":["Sheet1","Sheet2","Sheet3"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"Sheet1","index":0,"n_rows":140,"n_cols":87,"rows_kept":140,"merged":[[2,0,3,0],[2,1,2,3],[2,4,2,11],[2,12,2,15],[23,0,23,13],[27,0,28,0],[27,1,28,1],[27,2,27,4],[27,5,27,11],[27,12,27,14],[27,15,27,20],[27,21,27,23],[27,24,27,29],[27,30,27,35],[27,36,27,41],[27,42,27,44],[27,45,27,47],[27,48,27,62],[27,63,27,74],[27,75,27,77],[27,78,27,80],[27,81,27,86],[48,0,48,6],[139,0,139,3]],"flags":["formulas_cached_only"]}
["Supplementary Table S5 Microarray and RNA-seq for CSE expression "]
["Information for microarray  and statistics analysis."]
["Symbol","Results for local BLAST",null,null,"Expression levels for different tissues (log2 transformed)",{"$nulls":7},"Significance（Tukey HSD，α=0.05)"]
[null,"best hit in probe","Score (Bits) ","  E-Value","ML","ML","DP","DP","DX","DX","SLp","SLp","ML","DP","DX","SLp"]
["PtrCSE1","PtpAffx.32381.1.S1_s_at",468,2e-131,6.59073452850151,5.87728291758409,9.86162642717315,9.58762280160751,11.7067080883181,11.6824421891858,10.5111001873069,10.4950020571317,"c","b","b","a"]
["PtrCSE2","PtpAffx.101699.1.A1_a_at",489,7e-138,6.78686696514417,7.30562099955525,8.19785349305676,7.84505514578822,10.0735833355284,10.456940114658,7.66284823699332,7.92920689334359,"a","a","b","a"]
["PtrCSE3","PtpAffx.154816.1.S1_at",614,2e-175,10.3278293892236,10.3015816843077,8.9963698952142,9.59961097759122,9.39939285782258,9.8860068837935,10.563221584067,10.7196059883066,"a","a","a","a"]
["PtrCSE4","PtpAffx.9498.2.S1_at",639,0,9.60997061098606,11.2042251322352,5.70981746679034,6.30897818699803,4.43392281601135,5.28187640023164,6.38380956671364,6.1094461699073,"b","a","a","a"]
["PtrCSE5","PtpAffx.99972.1.A1_at",542,1e-153,4.97811234830193,6.11442976471811,4.31992889516951,4.08658287910674,4.3120094829172,4.26003525946882,3.99736363028782,3.68989240823546,"a","a","a","a"]
["PtrCSE6","PtpAffx.220813.1.S1_s_at",668,0,7.99005457607578,8.05810288554977,6.74061884567794,7.26130329012918,7.08635062702621,7.79882038026259,8.38458402087751,8.70774612121746,"ab","a","ab","b"]
["PtrCSE7","PtpAffx.30856.1.A1_at",470,8e-132,7.13928496437351,8.97514958613777,4.13172144419353,4.58340643420073,3.94905039117251,3.65350709221191,4.61668034599126,4.40511155855457,"b","a","a","a"]
["PtrCSE8","PtpAffx.101644.1.A1_at",540,5e-153,3.96144019791943,3.50664249650956,3.5835057871957,3.86318998803507,3.74122350669373,3.54259034612606,4.59605528686957,4.6095420151124,"a","a","a","a"]
["PtrCSE9","PtpAffx.83752.1.S1_at",601,2e-171,8.40838286612684,7.25277738597796,9.97457353982678,10.3619342321926,8.99190718087332,8.8294917870039,7.22566670627728,7.29346027392485,"b","a","ab","b"]
["PtrCSE10","PtpAffx.203921.1.S1_at",892,0,9.99664704287957,9.98898599304975,8.51136524061141,8.38557930346208,8.52047699285352,7.99939412670538,8.5870416251076,8.98575959667875,"b","a","a","a"]
["PtrCSE11","PtpAffx.122535.1.S1_at",553,6e-157,6.01420858732301,5.476259265668,4.92473465282225,4.96575332424007,4.99963668880383,4.49792752275665,5.12799972723121,5.87297694187852,"a","a","a","a"]
["PtrCSE12","PtpAffx.29385.1.A1_at",500,3e-141,4.46353786868127,5.13032587017916,7.06949610197819,7.13836021138737,8.09290436274372,8.18297179463208,7.23581916652114,7.11018527943767,"c","a","b","ab"]
["PtrCSE13","PtpAffx.158724.1.S1_at",509,7e-144,10.9300378425893,10.9415834189197,10.0612515272631,10.4572335547107,9.7137811627662,9.99195231777223,9.6266057678578,10.3544362262193,"a","a","a","a"]
["PtrCSE14","PtpAffx.90506.1.A1_at",84.2,8e-16,3.60618275337854,3.26935413147039,3.18512627255395,3.67022060572417,3.45354297087921,3.26655350835363,3.41633323605173,3.46332411425634,"a","a","a","a"]
["PtrCSE15","PtpAffx.218091.1.S1_at",334,3e-91,6.67090096854144,5.95369035202003,6.14299059169936,5.74838824255048,6.02707828700182,5.96932083007881,6.87640601700881,7.32007024540099,"a","a","a","a"]
["PtrCSE16","Ptp.7666.1.S1_at",670,0,3.59676913905865,3.5512903954163,3.5262447179847,3.8747847186965,3.76350379946414,3.95619317398082,3.95896343992035,5.3712565228187,"a","a","a","a"]
["PtrCSE17","PtpAffx.201475.1.S1_at",883,0,9.52144825126308,9.06851846066937,9.97899649730174,10.1350868324252,9.2238674835312,9.01109234145049,8.099489496152,7.92406786514271,"b","a","b","c"]
["PtrCSE18","PtpAffx.141649.1.S1_at",345,3e-94,4.21687313059856,3.78780238541539,4.16325761501171,3.71577767748691,4.40111307285674,4.25368782112517,4.0196622167498,3.90143683225731,"a","a","a","a"]
[]
["*The different letters present significant expression difference in respective tissues. The boxes marked in red indicate corresponding PoptrCSE has significanlyt high expression in this tissues."]
[]
[]
["Reads counts for PtoptrCSE and PoptrCSE-like genes in xylem tissue of transgenic and wildtype Populus trichocarpa "]
["Gene symbols","gene names","NSF1_WT",null,null,"Knock down of PAL2,PAL4 and PAL5",{"$nulls":6},"NSF2_WT",null,null,"Knock down of PAL1,PAL2,PAL3,PAL4,PAL5",{"$nulls":5},"NSF3_WT",null,null,"Knock down of CAD1 and CAD2",{"$nulls":5},"Knock down of C3H3, C4H1 and C4H2",{"$nulls":5},"Knock down of CAD1 and overexpression of CAD2",{"$nulls":8},"NSF4_WT",null,null,"Knock down of MYB156",{"$nulls":14},"Knock down of HCT1 and HCT6",{"$nulls":11},"NSF6_WT",null,null,"Knock down of 4CL3 and 4CL5",null,null," Knock down of CCoAOMT1,CCoAOMT2"]
[null,null,"NSF1_WT-1","NSF1_WT-2","NSF1_WT-3","NSF1_i7-10-1","NSF1_i7-10-2","NSF1_i7-10-3","NSF1_i7-2-1","NSF1_i7-2-2","NSF1_i7-2-3","NSF1_i7-6-2","NSF2_WT-1","NSF2_WT-2","NSF2_WT-3","NSF2_i8-1-1","NSF2_i8-1-2","NSF2_i8-1-3","NSF2_i8-10-1","NSF2_i8-10-2","NSF2_i8-10-3","NSF3_WT-1","NSF3_WT-2","NSF3_WT-3","NSF3_i35-1-1","NSF3_i35-1-2","NSF3_i35-1-3","NSF3_i35-15-1","NSF3_i35-15-2","NSF3_i35-15-3","NSF3_i69-13-1","NSF3_i69-13-2","NSF3_i69-13-3","NSF3_i69-4-1","NSF3_i69-4-2","NSF3_i69-4-3","NSF3_o65-7-1","NSF3_o65-7-2","NSF3_o65-7-3","NSF3_o66-21-1","NSF3_o66-21-2","NSF3_o66-21-3","NSF3_o66-7-1","NSF3_o66-7-2","NSF3_o66-7-3","NSF4_WT-1","NSF4_WT-2","NSF4_WT-3","NSF4_a46-1-1","NSF4_a46-1-2","NSF4_a46-1-3","NSF4_a46-3-1","NSF4_a46-3-2","NSF4_a46-3-3","NSF4_a46-4-1","NSF4_a46-4-2","NSF4_a46-4-3","NSF4_a46-5-1","NSF4_a46-5-2","NSF4_a46-5-3","NSF4_a46-8-1","NSF4_a46-8-2","NSF4_a46-8-3","NSF5_i19-15-1","NSF5_i19-15-2","NSF5_i19-15-3","NSF5_i19-4-1","NSF5_i19-4-2","NSF5_i19-4-3","NSF5_i19-7-1","NSF5_i19-7-2","NSF5_i19-7-3","NSF5_i19-8-1","NSF5_i19-8-2","NSF5_i19-8-3","NSF6_WT-1","NSF6_WT-2","NSF6_WT-3","NSF6_i15-3-1","NSF6_i15-3-2","NSF6_i15-3-3","NSF6_i24-5-1","NSF6_i24-5-2","NSF6_i24-5-3","NSF6_i24-12-1","NSF6_i24-12-2","NSF6_i24-12-3"]
["PoptrCSE1","Potri.003G059200",874,930,944,781,846,901,1072,1590,967,963,1968,2338,1175,3930,9326,10420,3515,2836,2769,4536,4709,6552,7622,2824,3594,3396,9081,5482,6244,6140,4592,4443,6613,12168,9557,6771,7308,9645,14550,9608,13328,4291,5401,16437,3902,1721,3575,1889,1046,3008,8641,7220,1482,1682,2828,3602,3796,2759,1709,2691,3917,2737,2643,3123,3861,2160,3412,588,405,345,3464,3510,2832,2038,3648,4695,659,209,659,5333,2832,2672,5057,4625,4371]
["PoptrCSE10","Potri.017G114800",170,288,165,119,150,190,231,163,317,153,133,112,53,288,615,721,230,182,177,579,515,780,1293,491,761,639,1804,1133,742,857,582,638,994,1848,1194,1017,1016,1269,1914,1530,2093,635,813,2907,834,670,1000,515,880,1096,1385,2222,647,419,570,877,839,810,375,477,959,200,226,426,291,161,218,604,436,675,241,310,230,175,262,425,613,542,495,347,199,172,241,298,239]
["PoptrCSE11","Potri.008G040000",5,3,5,7,3,3,17,15,14,7,15,4,3,9,41,45,17,10,15,24,13,13,39,11,22,20,44,31,28,19,11,8,15,34,50,20,32,34,75,47,68,24,39,72,22,20,25,13,27,12,64,36,10,7,9,13,7,18,17,11,12,13,17,16,4,2,6,10,28,9,7,10,10,6,15,14,21,8,21,30,12,4,12,19,18]
["PoptrCSE12","Potri.010G124000",405,459,433,292,353,406,371,512,364,355,767,865,411,2080,4420,4833,1750,1417,1468,1559,1465,2056,2633,1061,1387,1333,3131,2047,2031,2011,1505,1367,2151,3756,3226,2803,2249,3102,4450,3502,5306,1442,1947,5884,1781,872,1868,990,1160,1715,3082,3109,932,870,1362,1569,1464,1338,812,1118,1553,1234,1221,1319,1419,965,1473,598,385,525,1611,1674,1388,886,1597,2145,488,240,464,2264,1212,931,1619,1666,1246]
["PoptrCSE13","Potri.010G222300",133,234,116,123,131,157,351,304,699,130,158,175,65,228,638,658,214,208,190,554,476,478,858,357,444,380,1285,665,540,541,343,289,410,846,1047,690,810,1071,1743,1451,1612,509,675,2904,903,1096,1480,644,1465,1034,1578,1369,707,527,329,665,530,744,355,469,446,209,181,476,277,165,307,570,783,907,227,237,189,149,364,495,1239,1063,1242,404,292,228,421,348,438]
["PoptrCSE14","Potri.011G164300",1,1,2,5,1,1,2,2,1,2,0,0,0,0,0,0,0,0,0,12,2,3,5,1,0,0,1,3,3,3,2,0,2,3,9,9,3,3,21,19,13,2,1,3,2,1,0,0,0,0,1,7,1,0,1,1,1,0,2,0,4,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0]
["PoptrCSE15","Potri.012G041800",115,149,107,59,90,112,190,198,308,101,52,42,24,43,134,99,59,75,78,282,418,483,298,107,173,223,517,266,359,238,181,462,638,1193,490,403,398,322,632,415,495,131,193,2549,590,627,1035,614,763,1190,2653,2030,556,346,489,415,535,455,175,404,340,197,179,234,245,108,236,1048,529,687,216,295,203,116,208,256,834,655,462,176,122,95,193,174,170]
["PoptrCSE16","Potri.015G031900",0,0,0,0,0,1,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,4,0,0,0,0,1,2,3,1,0,2,1,0,2,1,1,7,1,1,2,2,0,0,0,0,1,0,0,1,0,0,0,0,0,4,0,2,2,0,0,0,1,1,6,0,0,0,0,0,0,0,0]
["PoptrCSE17","Potri.018G045800",71,52,50,28,47,45,40,43,37,46,65,65,35,138,304,412,105,94,110,378,235,270,338,168,276,222,491,399,251,306,192,122,200,353,653,449,472,534,757,710,786,221,316,767,340,132,378,118,312,296,395,645,221,121,144,271,180,205,214,203,269,93,59,124,156,111,121,205,65,73,127,111,100,69,144,305,119,50,101,213,136,114,123,154,120]
["PoptrCSE18","Potri.004G099700",0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["PoptrCSE2","Potri.001G175000",492,448,539,494,444,454,538,737,422,587,858,1208,672,2428,5137,6321,2210,1786,1829,2723,2285,3362,4773,1611,2174,1858,4872,3209,3346,3157,2397,1920,2982,5121,5615,3809,4128,5390,8162,5585,7671,2354,3091,8115,2124,802,1772,964,388,1061,4099,3364,828,840,1431,1812,2026,1455,849,1306,2211,1496,1454,1570,1768,1442,1714,156,88,107,1714,1712,1717,994,1870,2638,191,82,256,2800,1358,1278,2260,2143,1911]
["PoptrCSE3","Potri.011G046500",77,106,78,79,86,111,130,173,213,79,115,139,69,215,482,599,182,157,145,324,257,355,548,240,264,204,543,338,336,323,274,218,391,623,586,505,545,606,921,718,992,307,363,1089,329,180,451,213,305,303,620,571,203,177,189,322,268,232,182,209,287,148,165,216,168,117,186,141,121,141,165,216,150,118,215,257,147,89,116,263,162,109,234,219,191]
["PoptrCSE4","Potri.002G204200",0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,1,2,0,0,0,3,0,2,0,0,0,6,0,2,1,0,0,0,1,1,0,0,0,0,0,0,1,0,0,0,1,1,0,0,0,0,0,0,4,3,0,0,0,0,0,0,0]
["PoptrCSE5","Potri.010G212200",39,47,55,23,37,47,56,80,161,49,54,66,18,139,229,266,100,85,79,161,112,270,316,140,182,185,522,325,150,176,153,128,206,360,361,329,232,269,445,362,420,134,162,1028,291,164,375,209,581,448,430,362,256,152,191,222,214,207,95,148,259,92,77,146,97,68,92,388,265,172,102,96,73,67,111,152,199,194,189,131,80,55,133,132,101]
["PoptrCSE6","Potri.008G049000",425,420,467,348,362,333,369,535,283,432,1100,1789,670,2711,5803,6885,2552,2291,2180,2194,1635,2115,2279,685,1270,1317,2523,1897,2238,2192,1608,1570,2203,4091,4955,4250,3857,3175,5583,3751,4691,1239,1814,7222,1795,671,1946,978,453,807,3733,2597,534,695,998,1717,1671,1368,787,1172,1416,1884,2127,2183,2340,1917,2182,250,239,78,2337,2204,2230,1528,2561,3666,212,67,393,3589,1858,1799,3280,2978,2335]
["PoptrCSE7","Potri.014G129000",18,19,13,62,42,46,200,100,555,8,14,6,1,16,66,21,16,12,14,4,21,15,44,21,9,42,82,17,24,21,13,54,81,212,27,31,44,13,42,19,50,26,5,745,87,743,1085,484,1609,878,152,1058,892,471,134,171,110,224,97,64,41,48,34,212,28,22,60,1965,1949,2410,20,61,32,8,55,41,1528,1627,1113,45,61,26,83,73,143]
["PoptrCSE8","Potri.001G466700",0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["PoptrCSE9","Potri.006G237200",69,71,63,40,57,66,93,112,47,82,74,62,28,137,338,401,150,125,207,350,318,277,442,193,380,272,723,477,260,236,163,137,228,468,616,457,635,624,1062,1044,1088,363,618,754,450,180,384,176,310,238,512,597,145,78,122,242,154,146,176,178,162,86,69,87,191,138,87,298,118,201,128,157,80,113,282,450,74,61,91,345,238,168,244,251,187]
[]
["Pearson correlation coefficients for PoptrCSE genes and identified genes involved in lignin biosynthesis (only corr >0.9 shown)"]
[null,"Gene1","Gene2","Corr"]
[null,"PAL4","PAL5",1]
[null,"PoptrCSE2","COMT2",0.989747930784307]
[null,"F5H1","F5H2",0.988696196548291]
[null,"C4H1","C3H",0.987776623717438]
[null,"F5H2","COMT2",0.977692295378398]
[null,"F5H1","COMT2",0.97657498122025]
[null,"PAL2","PAL4",0.976153115506823]
[null,"PAL2","PAL5",0.976153115506823]
[null,"F5H2","PoptrCSE2",0.973746215114679]
[null,"PoptrCSE1","PoptrCSE2",0.972741934601741]
[null,"PoptrCSE6","F5H2",0.972381740546934]
[null,"PoptrCSE1","COMT2",0.970612201021332]
[null,"MYB021","PoptrCSE2",0.967257991696812]
[null,"MYB021","MYB002",0.9654148979325]
[null,"F5H2","PoptrCSE1",0.963447943398685]
[null,"F5H1","PoptrCSE2",0.963270232290287]
[null,"PoptrCSE6","MYB167",0.96319129176413]
[null,"PoptrCSE6","F5H1",0.960195113133038]
[null,"F5H2","MYB090",0.959522947335044]
[null,"F5H1","PoptrCSE1",0.959289840546079]
[null,"PoptrCSE6","MYB090",0.959045916875928]
[null,"PoptrCSE6","COMT2",0.957885084186345]
[null,"MYB021","COMT2",0.955165520534603]
[null,"PoptrCSE6","PoptrCSE2",0.955010348602615]
[null,"PoptrCSE1","MYB167",0.951721033115828]
[null,"PoptrCSE6","MYB002",0.950793363191568]
[null,"F5H2","MYB002",0.9489193715464]
[null,"F5H2","MYB021",0.948142653351852]
[null,"COMT2","MYB020",0.948006594936577]
[null,"PoptrCSE2","MYB167",0.947957148941663]
[null,"PoptrCSE6","MYB020",0.947909398602366]
[null,"PoptrCSE2","MYB020",0.947262972504132]
[null,"COMT2","MYB167",0.947210238697542]
[null,"F5H2","MYB167",0.945691179049749]
[null,"4CL3","PoptrCSE1",0.945658777336986]
[null,"PoptrCSE2","MYB002",0.945634320293189]
[null,"MYB090","MYB021",0.945351714879911]
[null,"F5H1","MYB002",0.944463129398092]
[null,"MYB020","MYB002",0.942733225243207]
[null,"PoptrCSE6","MYB021",0.942122402962897]
[null,"MYB003","MYB002",0.940560875188529]
[null,"F5H2","MYB020",0.939852263558836]
[null,"MYB021","PoptrCSE12",0.939792851448989]
[null,"MYB167","MYB020",0.938687222654672]
[null,"MYB090","PoptrCSE12",0.938564220145347]
[null,"F5H1","MYB020",0.938027486535028]
[null,"4CL3","MYB167",0.937141565237437]
[null,"PoptrCSE1","MYB020",0.936829427063737]
[null,"PoptrCSE6","PoptrCSE12",0.935905751287883]
[null,"F5H2","4CL3",0.935871304269725]
[null,"COMT2","MYB002",0.935112608376128]
[null,"F5H1","MYB167",0.934801951713384]
[null,"F5H1","MYB021",0.933949838056648]
[null,"4CL3","PoptrCSE2",0.932538937135443]
[null,"COMT1","COMT2",0.931945253981329]
[null,"PoptrCSE12","COMT2",0.931098731014226]
[null,"F5H1","MYB090",0.930299446498109]
[null,"F5H1","4CL3",0.929872188189877]
[null,"MYB090","MYB002",0.929395689302759]
[null,"HCT1","PoptrCSE2",0.928762597589174]
[null,"F5H2","PoptrCSE12",0.927410560710991]
[null,"MYB090","COMT2",0.927396482768134]
[null,"PoptrCSE6","PoptrCSE1",0.927225880668656]
[null,"COMT1","PoptrCSE2",0.924048824805777]
[null,"MYB021","MYB020",0.923701708925481]
[null,"HCT1","PoptrCSE1",0.923007383608725]
[null,"MYB090","PoptrCSE2",0.922597039900301]
[null,"MYB021","PoptrCSE1",0.922318352312463]
[null,"COMT1","F5H1",0.922287283410752]
[null,"PoptrCSE6","4CL3",0.922039636468212]
[null,"4CL3","MYB020",0.922000169251904]
[null,"PAL3","PAL2",0.91913824018356]
[null,"MYB090","MYB167",0.918861607459625]
[null,"4CL3","COMT2",0.91822042131279]
[null,"PoptrCSE12","MYB020",0.918123285612753]
[null,"PoptrCSE12","MYB002",0.917963739598911]
[null,"F5H1","PoptrCSE12",0.916946076192041]
[null,"PoptrCSE12","PoptrCSE2",0.915405650228052]
[null,"MYB167","MYB002",0.914715057780075]
[null,"COMT1","PoptrCSE1",0.914349832746053]
[null,"MYB003","MYB021",0.912801802147303]
[null,"PoptrCSE6","MYB003",0.911526758432162]
[null,"F5H1","4CL1",0.911201915116703]
[null,"4CL1","COMT2",0.910703561092472]
[null,"MYB021","MYB167",0.910385457625206]
[null,"HCT1","COMT2",0.907246050879559]
[null,"PoptrCSE1","MYB002",0.906331334278858]
[null,"PoptrCSE12","MYB167",0.904221973299139]
[null,"F5H2","4CL1",0.90259133333802]
["*corr means Pearson correlation coefficients "]

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